LOCUS       DAJVTL010000001        86165 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.001, whole genome shotgun sequence.
ACCESSION   DAJVTL010000001 DAJVTL010000000
VERSION     DAJVTL010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 86165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 86165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..86165
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.001"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..269)
                     /gene="tuf"
                     /locus_tag="OQQ26_000001"
     CDS             complement(<1..269)
                     /gene="tuf"
                     /locus_tag="OQQ26_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCS1855638.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYV"
     gene            complement(340..2454)
                     /gene="fusA"
                     /locus_tag="OQQ26_000002"
     CDS             complement(340..2454)
                     /gene="fusA"
                     /locus_tag="OQQ26_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HCS1855639.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT
                     RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
                     HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
                     AGYPVVDMGVRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDEAPSNVAQAVIEARGK"
     gene            complement(2551..3021)
                     /gene="rpsG"
                     /locus_tag="OQQ26_000003"
     CDS             complement(2551..3021)
                     /gene="rpsG"
                     /locus_tag="OQQ26_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015873274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HCS1855640.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(3118..3492)
                     /gene="rpsL"
                     /locus_tag="OQQ26_000004"
     CDS             complement(3118..3492)
                     /gene="rpsL"
                     /locus_tag="OQQ26_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HCS1855641.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3618..3905)
                     /gene="tusB"
                     /locus_tag="OQQ26_000005"
     CDS             complement(3618..3905)
                     /gene="tusB"
                     /locus_tag="OQQ26_000005"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HCS1855642.1"
                     /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
                     ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
     gene            complement(3913..4272)
                     /gene="tusC"
                     /locus_tag="OQQ26_000006"
     CDS             complement(3913..4272)
                     /gene="tusC"
                     /locus_tag="OQQ26_000006"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HCS1855643.1"
                     /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
                     FQLLPGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
                     ADALRRELANYDVILRF"
     gene            complement(4272..4658)
                     /gene="tusD"
                     /locus_tag="OQQ26_000007"
     CDS             complement(4272..4658)
                     /gene="tusD"
                     /locus_tag="OQQ26_000007"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HCS1855644.1"
                     /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYREGV
                     YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4658..5380)
                     /locus_tag="OQQ26_000008"
     CDS             complement(4658..5380)
                     /locus_tag="OQQ26_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1855645.1"
                     /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5547..6359)
                     /gene="fkpA"
                     /locus_tag="OQQ26_000009"
     CDS             complement(5547..6359)
                     /gene="fkpA"
                     /locus_tag="OQQ26_000009"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCS1855646.1"
                     /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
                     DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
                     QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
                     IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
     gene            6580..6798
                     /locus_tag="OQQ26_000010"
     CDS             6580..6798
                     /locus_tag="OQQ26_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HCS1855647.1"
                     /translation="MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(6846..7424)
                     /gene="slyD"
                     /locus_tag="OQQ26_000011"
     CDS             complement(6846..7424)
                     /gene="slyD"
                     /locus_tag="OQQ26_000011"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCS1855648.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
     gene            complement(7519..7719)
                     /locus_tag="OQQ26_000012"
     CDS             complement(7519..7719)
                     /locus_tag="OQQ26_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HCS1855649.1"
                     /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
                     ADKEARDHVRKDEQVIGIFHPD"
     gene            complement(7729..9534)
                     /gene="kefB"
                     /locus_tag="OQQ26_000013"
                     /pseudo
     CDS             complement(7729..9534)
                     /gene="kefB"
                     /locus_tag="OQQ26_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417809.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
     gene            complement(9534..10085)
                     /gene="kefG"
                     /locus_tag="OQQ26_000014"
     CDS             complement(9534..10085)
                     /gene="kefG"
                     /locus_tag="OQQ26_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312229.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HCS1855650.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
                     PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
                     KYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
                     QELASHARAYGDWLANPLSPGGR"
     gene            10216..12129
                     /locus_tag="OQQ26_000015"
     CDS             10216..12129
                     /locus_tag="OQQ26_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1855651.1"
                     /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDAN
                     ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
                     IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
                     SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
                     DGDQEDYQQWLSDVQKQENQADEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
                     LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
                     EQLEQMLLEGQSN"
     gene            12129..13151
                     /locus_tag="OQQ26_000016"
     CDS             12129..13151
                     /locus_tag="OQQ26_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HCS1855652.1"
                     /translation="MAQITTTDANEFSSSAEFIPMRGFSNCHLQTMLPRLFRRQVKFT
                     PYWQRLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGW
                     LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
                     CLLAKEGNDLPVDAALIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY
                     PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
                     AKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
                     LEAKSC"
     gene            13145..13363
                     /locus_tag="OQQ26_000017"
     CDS             13145..13363
                     /locus_tag="OQQ26_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HCS1855653.1"
                     /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
                     QLQCGEAVLVWSELHETVNIMPRSQFRE"
     gene            13417..14286
                     /locus_tag="OQQ26_000018"
                     /pseudo
     CDS             13417..14286
                     /locus_tag="OQQ26_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417814.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
     gene            complement(14341..14745)
                     /locus_tag="OQQ26_000019"
     CDS             complement(14341..14745)
                     /locus_tag="OQQ26_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HCS1855654.1"
                     /translation="MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAA
                     GGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVA
                     RAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
     gene            15047..15679
                     /gene="crp"
                     /locus_tag="OQQ26_000020"
     CDS             15047..15679
                     /gene="crp"
                     /locus_tag="OQQ26_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HCS1855655.1"
                     /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
     gene            15730..17820
                     /locus_tag="OQQ26_000021"
     CDS             15730..17820
                     /locus_tag="OQQ26_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1855656.1"
                     /translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
                     ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
                     ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
                     LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
                     AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
                     RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
                     YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
                     LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
                     LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
                     QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
                     AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
                     RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
                     HGIWLSRKLQDSKA"
     gene            complement(17887..19107)
                     /gene="argD/dapC"
                     /locus_tag="OQQ26_000022"
     CDS             complement(17887..19107)
                     /gene="argD/dapC"
                     /locus_tag="OQQ26_000022"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     acetylornithine/succinyldiaminopimelate transaminase"
                     /protein_id="HCS1855657.1"
                     /translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
                     VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
                     VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQ
                     HQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
                     HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
                     IRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNAGPDVMRFAPSLVVEDADIDEG
                     MQRFAHAVAKVVGA"
     gene            complement(19193..19756)
                     /gene="pabA"
                     /locus_tag="OQQ26_000023"
     CDS             complement(19193..19756)
                     /gene="pabA"
                     /locus_tag="OQQ26_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HCS1855658.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
                     QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
                     KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPGSLPACFDVTAWSETREIMGIRHRQW
                     DLEGVQFHPESILSEQGHQLLANFLHR"
     gene            complement(19788..20390)
                     /locus_tag="OQQ26_000024"
     CDS             complement(19788..20390)
                     /locus_tag="OQQ26_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HCS1855659.1"
                     /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA
                     ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLEKTKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
                     SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
     gene            complement(20380..20547)
                     /locus_tag="OQQ26_000025"
     CDS             complement(20380..20547)
                     /locus_tag="OQQ26_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HCS1855660.1"
                     /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
                     RLVELRRHYER"
     gene            complement(20652..21224)
                     /gene="ppiA"
                     /locus_tag="OQQ26_000026"
                     /gene_synonym="rotA"
     CDS             complement(20652..21224)
                     /gene="ppiA"
                     /locus_tag="OQQ26_000026"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HCS1855661.1"
                     /translation="MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELEL
                     DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
     gene            21495..22676
                     /gene="tsgA"
                     /locus_tag="OQQ26_000027"
     CDS             21495..22676
                     /gene="tsgA"
                     /locus_tag="OQQ26_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HCS1855662.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAA
                     MFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
                     EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVAKEKWGIGVLFLSVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
                     LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
                     TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
                     H"
     gene            22938..25481
                     /gene="nirB"
                     /locus_tag="OQQ26_000028"
     CDS             22938..25481
                     /gene="nirB"
                     /locus_tag="OQQ26_000028"
                     /EC_number="1.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-nitrite reductase large subunit"
                     /protein_id="HCS1855663.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
                     DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
                     AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
                     EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
                     YAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
                     DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
                     LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
                     AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
                     EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
                     VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
                     FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
                     RECSEAQGKDVGIIATEKGWNLYVCGNGGVKPRHADLLAADIDRETLIKYLDRFMMFY
                     IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
                     NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
     gene            25478..25804
                     /gene="nirD"
                     /locus_tag="OQQ26_000029"
     CDS             25478..25804
                     /gene="nirD"
                     /locus_tag="OQQ26_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HCS1855664.1"
                     /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
                     IDPFFESSVLSRGLIAEHQGELWVASPLKKQHFRLSDGLCMEDEQFSVKHYEARVKDG
                     VVQLRG"
     gene            25931..26737
                     /gene="nirC"
                     /locus_tag="OQQ26_000030"
     CDS             25931..26737
                     /gene="nirC"
                     /locus_tag="OQQ26_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312245.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HCS1855665.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSIRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGTISHGQMW
                     AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
                     NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
                     LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG"
     gene            26756..28129
                     /gene="cobA"
                     /locus_tag="OQQ26_000031"
     CDS             26756..28129
                     /gene="cobA"
                     /locus_tag="OQQ26_000031"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HCS1855666.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
                     FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEVRRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
                     LRGRVKQQFATMGERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
                     VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRSGYHC
                     VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
                     GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
                     KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
                     LNWFSNH"
     gene            28376..28543
                     /locus_tag="OQQ26_000032"
     CDS             28376..28543
                     /locus_tag="OQQ26_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HCS1855667.1"
                     /translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
                     KIIGGCGPTAQ"
     gene            complement(28832..29647)
                     /locus_tag="OQQ26_000033"
                     /pseudo
     CDS             complement(28832..29647)
                     /locus_tag="OQQ26_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016241668.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
     gene            complement(29659..30963)
                     /locus_tag="OQQ26_000034"
     CDS             complement(29659..30963)
                     /locus_tag="OQQ26_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfT family protein"
                     /protein_id="HCS1855668.1"
                     /translation="MDLYIQIIVVACLMGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
                     NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
                     IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLI
                     AAVVVLMARVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
                     EERTSRIIKNLPYIAIVRALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
                     QAALAEFMRGLGFVPLIATIALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
                     EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
                     AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
     gene            complement(30975..31328)
                     /locus_tag="OQQ26_000035"
     CDS             complement(30975..31328)
                     /locus_tag="OQQ26_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2620 domain-containing protein"
                     /protein_id="HCS1855669.1"
                     /translation="MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQ
                     LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
                     EHVEHAIPMLINHLK"
     gene            complement(31325..32218)
                     /locus_tag="OQQ26_000036"
     CDS             complement(31325..32218)
                     /locus_tag="OQQ26_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003847969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase-related protein"
                     /protein_id="HCS1855670.1"
                     /translation="MSFDPTGYTFAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
                     TRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELA
                     QEMIDEIEQGIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTS
                     FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
                     DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
                     ADVDVMLRETSLSIFPIRTDS"
     gene            complement(32215..33441)
                     /locus_tag="OQQ26_000037"
                     /pseudo
     CDS             complement(32215..33441)
                     /locus_tag="OQQ26_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709153.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
     gene            complement(33442..34605)
                     /locus_tag="OQQ26_000038"
                     /pseudo
     CDS             complement(33442..34605)
                     /locus_tag="OQQ26_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709154.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YhfX family PLP-dependent enzyme"
     gene            complement(34689..35051)
                     /locus_tag="OQQ26_000039"
     CDS             complement(34689..35051)
                     /locus_tag="OQQ26_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417841.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HCS1855671.1"
                     /translation="METRLNLLCEVGVIDKDVCKGMMQVVNVLEKECHLPVRSEQGTM
                     AMTHMASALMRSRRGEEIEPLDNELQAELAQSSHWQAVLQLHQVLLKEFALEVNPCEE
                     GYLLANLYGLWMAANEEV"
     gene            complement(35068..35973)
                     /locus_tag="OQQ26_000040"
     CDS             complement(35068..35973)
                     /locus_tag="OQQ26_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855672.1"
                     /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
                     LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
                     LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGLCLALE
                     LGPHTYVGEHQLICRKGESANVKRVGLDNRSADQKIMTDVFFGGSDVERVDLSYHESL
                     QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
                     RAVVDKHALLAHQQRVVSGEQEPSY"
     gene            complement(36236..37240)
                     /gene="trpS"
                     /locus_tag="OQQ26_000041"
     CDS             complement(36236..37240)
                     /gene="trpS"
                     /locus_tag="OQQ26_000041"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HCS1855673.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNALYGDIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASAHASRTLKAVYEAIGFVAKP
                     "
     gene            complement(37233..37991)
                     /gene="gph"
                     /locus_tag="OQQ26_000042"
     CDS             complement(37233..37991)
                     /gene="gph"
                     /locus_tag="OQQ26_000042"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HCS1855674.1"
                     /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
                     RVITWIGNGADVLMERALTWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
                     GEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPSVAPLLEALDIAKYFSVVIGG
                     DDVENKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
     gene            complement(37984..38661)
                     /gene="rpe"
                     /locus_tag="OQQ26_000043"
     CDS             complement(37984..38661)
                     /gene="rpe"
                     /locus_tag="OQQ26_000043"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HCS1855675.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKENGCKAGLVFNPATPLSYLDYVLDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
                     LAKVSHE"
     gene            complement(38679..39515)
                     /gene="dam"
                     /locus_tag="OQQ26_000044"
     CDS             complement(38679..39515)
                     /gene="dam"
                     /locus_tag="OQQ26_000044"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HCS1855676.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKTYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
                     RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
                     KK"
     gene            complement(39622..40899)
                     /gene="damX"
                     /locus_tag="OQQ26_000045"
     CDS             complement(39622..40899)
                     /gene="damX"
                     /locus_tag="OQQ26_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HCS1855677.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERTERGEPQINFDDIELD
                     DTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMM
                     MGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTS
                     AENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNS
                     TLPTEPATVAPVRNGNASRDTEKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPV
                     AQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNV
                     GSLKSASSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYAS
                     KEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
     gene            complement(40991..42079)
                     /gene="aroB"
                     /locus_tag="OQQ26_000046"
     CDS             complement(40991..42079)
                     /gene="aroB"
                     /locus_tag="OQQ26_000046"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HCS1855678.1"
                     /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
                     LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
                     GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
                     RTSERLGQFSSVETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEMRLIL
                     PLAIGKSEVRSGVSHELVLNAIADCQSA"
     gene            complement(42136..42657)
                     /gene="aroK"
                     /locus_tag="OQQ26_000047"
     CDS             complement(42136..42657)
                     /gene="aroK"
                     /locus_tag="OQQ26_000047"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HCS1855679.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            complement(43058..44296)
                     /gene="hofQ"
                     /locus_tag="OQQ26_000048"
     CDS             complement(43058..44296)
                     /gene="hofQ"
                     /locus_tag="OQQ26_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HCS1855680.1"
                     /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
                     KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA
                     RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
                     KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
                     LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLVLGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
                     KEDERRELVVFITPRLVSSE"
     gene            complement(44208..44612)
                     /gene="hofP"
                     /locus_tag="OQQ26_000049"
     CDS             complement(44208..44612)
                     /gene="hofP"
                     /locus_tag="OQQ26_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofP"
                     /protein_id="HCS1855681.1"
                     /translation="MRGKRWLLAGIALCLLTGLRDPFKPPEDLCRISELSQWRYQGIV
                     GRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDALTLGTGTNCEPPQWLWQRQ
                     GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
     gene            complement(44602..45042)
                     /gene="hofO"
                     /locus_tag="OQQ26_000050"
     CDS             complement(44602..45042)
                     /gene="hofO"
                     /locus_tag="OQQ26_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofO"
                     /protein_id="HCS1855682.1"
                     /translation="MNMFFDWWFATSPRLRQFCWAFWLLMLVTLIFLSSTHHEERDAL
                     IRLRASHHQQWATLYRLVDTTPFSEEKTLPFSPLDFQLPGAQLVSWHPSAQGGELALK
                     TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
     gene            complement(45026..45565)
                     /gene="hofN"
                     /locus_tag="OQQ26_000051"
     CDS             complement(45026..45565)
                     /gene="hofN"
                     /locus_tag="OQQ26_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofN"
                     /protein_id="HCS1855683.1"
                     /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
                     SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEAL
                     AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
                     GRWQFEYQLTRKVSDEHVL"
     gene            complement(45565..46344)
                     /gene="hofM"
                     /locus_tag="OQQ26_000052"
                     /pseudo
     CDS             complement(45565..46344)
                     /gene="hofM"
                     /locus_tag="OQQ26_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417854.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
     gene            46464..49016
                     /gene="mrcA"
                     /locus_tag="OQQ26_000053"
     CDS             46464..49016
                     /gene="mrcA"
                     /locus_tag="OQQ26_000053"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HCS1855684.1"
                     /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
                     KITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALSMEGVRWARPYRSDTQQG
                     PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
                     QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
     gene            complement(49181..49741)
                     /gene="nudE"
                     /locus_tag="OQQ26_000054"
     CDS             complement(49181..49741)
                     /gene="nudE"
                     /locus_tag="OQQ26_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HCS1855685.1"
                     /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
                     TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
                     GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLSQVRWPLAHMMDLLE
                     DPDFNEARNVSALFLVREWLKGQGRV"
     gene            50061..52196
                     /gene="igaA"
                     /locus_tag="OQQ26_000055"
     CDS             50061..52196
                     /gene="igaA"
                     /locus_tag="OQQ26_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HCS1855686.1"
                     /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRK
                     LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
                     GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
                     CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
                     QINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPL
                     QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
                     GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL
                     TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
                     NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
                     AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA
                     EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
                     HRTRMMEIQAYYESCLNPQLITPSESLIE"
     gene            52261..52929
                     /gene="yrfG"
                     /locus_tag="OQQ26_000056"
     CDS             52261..52929
                     /gene="yrfG"
                     /locus_tag="OQQ26_000056"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HCS1855687.1"
                     /translation="MHINIAWQDVDTVLLDMDGTLLDLTFDNYFWQKLVPETWGAKNG
                     VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
                     EALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
                     ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYERHPSLNDYRRLI
                     PSLM"
     gene            52940..53341
                     /gene="hslR"
                     /locus_tag="OQQ26_000057"
     CDS             52940..53341
                     /gene="hslR"
                     /locus_tag="OQQ26_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HCS1855688.1"
                     /translation="MKEKPVAEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALAR
                     KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
     gene            53366..54244
                     /gene="hslO"
                     /locus_tag="OQQ26_000058"
     CDS             53366..54244
                     /gene="hslO"
                     /locus_tag="OQQ26_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HCS1855689.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
                     LAELLVATSLLTATLKFDGDITVQLQGDGPMSLAVINGNNNQQMRGVARVQGEIPENA
                     DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
                     VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
                     TVYDPQYVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(54380..56104)
                     /locus_tag="OQQ26_000059"
     CDS             complement(54380..56104)
                     /locus_tag="OQQ26_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HCS1855690.1"
                     /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
                     PATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWD
                     FGCYLLLMAMLLLPWIQQSLRIRNGSSRYSYFYQSVWYNVLILLVIFLSNGLTWLVLL
                     LWGELFKLVGITFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
                     TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
                     PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGY
                     FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
                     TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKV
                     LAENVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLIEQDLNSDGQVERILFAF
                     NDDRVIVYGFDSDRKEWVALNMSLLPNEITKEKLLTAAKDGKLGTRPKAWLDLTVDGE
                     TLEINLSK"
     gene            56483..58108
                     /gene="pckA"
                     /locus_tag="OQQ26_000060"
     CDS             56483..58108
                     /gene="pckA"
                     /locus_tag="OQQ26_000060"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HCS1855691.1"
                     /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
                     ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
                     QHLKGLVTKQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
                     AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
                     MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
                     GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
                     SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
                     GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
                     SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTRILDPRNTYASPEQWQE
                     KAETLAKLFIDNFDKYTDTPAGAALVAAGPKLQ"
     gene            complement(58181..59533)
                     /gene="envZ"
                     /locus_tag="OQQ26_000061"
     CDS             complement(58181..59533)
                     /gene="envZ"
                     /locus_tag="OQQ26_000061"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HCS1855692.1"
                     /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
                     LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
                     GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
                     "
     gene            complement(59530..60249)
                     /gene="ompR"
                     /locus_tag="OQQ26_000062"
     CDS             complement(59530..60249)
                     /gene="ompR"
                     /locus_tag="OQQ26_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HCS1855693.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            60477..60953
                     /gene="greB"
                     /locus_tag="OQQ26_000063"
     CDS             60477..60953
                     /gene="greB"
                     /locus_tag="OQQ26_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HCS1855694.1"
                     /translation="MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSE
                     NADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHR
                     FRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP"
     gene            61050..63371
                     /locus_tag="OQQ26_000064"
     CDS             61050..63371
                     /locus_tag="OQQ26_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HCS1855695.1"
                     /translation="MMNDSFCRIIAGEIQARPEQVDAAIRLLDEGNTVPFIARYRKEI
                     TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
                     PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
                     ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
                     NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
     gene            63828..64055
                     /gene="feoA"
                     /locus_tag="OQQ26_000065"
     CDS             63828..64055
                     /gene="feoA"
                     /locus_tag="OQQ26_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HCS1855696.1"
                     /translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
     gene            64072..66393
                     /gene="feoB"
                     /locus_tag="OQQ26_000066"
     CDS             64072..66393
                     /gene="feoB"
                     /locus_tag="OQQ26_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312278.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HCS1855697.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
                     FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQITCHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
                     LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
                     AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
                     IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
                     GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
                     KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
                     NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAVDETWQSL
                     KDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
                     AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
                     LLRRARSRVDIELLATHKSVSSCCAASTTGDCH"
     gene            66393..66629
                     /gene="feoC"
                     /locus_tag="OQQ26_000067"
     CDS             66393..66629
                     /gene="feoC"
                     /locus_tag="OQQ26_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709183.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HCS1855698.1"
                     /translation="MASLIQVRDLLALRGRMEATQISQTLNTPQPMINAMLQQLESMG
                     KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            66832..67710
                     /gene="rpnA"
                     /locus_tag="OQQ26_000068"
     CDS             66832..67710
                     /gene="rpnA"
                     /locus_tag="OQQ26_000068"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnA"
                     /protein_id="HCS1855699.1"
                     /translation="MSKKQSSTPHDALFKLFLRQPETARDFLAFHLPAPIHALCDMKT
                     LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
                     MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
                     VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQ
                     TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLADI
                     MRFTGLSEEELAAASQ"
     gene            67783..68052
                     /locus_tag="OQQ26_000069"
     CDS             67783..68052
                     /locus_tag="OQQ26_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HCS1855700.1"
                     /translation="MQTVKLRQQGGAMIVTIPRDLAIDLGWSPGTELTVEKKGDSVNL
                     RATEHKPRGRLTVAQLLSQIDESEITELNQSTEGWAEGKKGNEAW"
     gene            68046..68411
                     /locus_tag="OQQ26_000070"
     CDS             68046..68411
                     /locus_tag="OQQ26_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HCS1855701.1"
                     /translation="MVKARTPHRGEIWYFNPDPVAGHELQGPHYCIVVTDKKLNNVLK
                     VAMCCPISTGANAARSTGVTVNVLPRDTQTGNLHGVVLCHQLKAVDLIARGAKFHTVA
                     DEALISEVISKLVNLIDPQ"
     gene            complement(68430..69200)
                     /gene="bioH"
                     /locus_tag="OQQ26_000071"
     CDS             complement(68430..69200)
                     /gene="bioH"
                     /locus_tag="OQQ26_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HCS1855702.1"
                     /translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
                     VDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
                     VTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
                     LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML
                     DKLWPHSESYIFAKAAHAPFISHPVEFCHLLVALKQRV"
     gene            69238..69921
                     /gene="gntX"
                     /locus_tag="OQQ26_000072"
     CDS             69238..69921
                     /gene="gntX"
                     /locus_tag="OQQ26_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417872.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HCS1855703.1"
                     /translation="MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPA
                     THSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL
                     HARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRAT
                     ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            69980..70555
                     /gene="nfuA"
                     /locus_tag="OQQ26_000073"
     CDS             69980..70555
                     /gene="nfuA"
                     /locus_tag="OQQ26_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HCS1855704.1"
                     /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
                     EGIEKHLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            70916..72232
                     /gene="gntT"
                     /locus_tag="OQQ26_000074"
     CDS             70916..72232
                     /gene="gntT"
                     /locus_tag="OQQ26_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HCS1855705.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
                     MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
                     SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
                     VNDPGFWLFKEYFNLTIDETIKSWSMLETIISVCGLVGCLLLNMVI"
     gene            complement(72277..74361)
                     /gene="malQ"
                     /locus_tag="OQQ26_000075"
     CDS             complement(72277..74361)
                     /gene="malQ"
                     /locus_tag="OQQ26_000075"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HCS1855706.1"
                     /translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
                     TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
                     KLPEGYHTLTLTQDDQRAYCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
                     IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
                     VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
                     QMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYKNVDSPEVRQFC
                     EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
                     MSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
                     LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
                     LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
                     IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFADDGVNKLLKD
                     LDRRRRAAAKKK"
     gene            complement(74371..76764)
                     /gene="malP"
                     /locus_tag="OQQ26_000076"
     CDS             complement(74371..76764)
                     /gene="malP"
                     /locus_tag="OQQ26_000076"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HCS1855707.1"
                     /translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
                     EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDL
                     LEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
                     DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
                     VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITSRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
                     VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
                     QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
                     VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            77376..78720
                     /gene="malT"
                     /locus_tag="OQQ26_000077"
                     /pseudo
     CDS             77376..78720
                     /gene="malT"
                     /locus_tag="OQQ26_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312287.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
     gene            complement(78719..78988)
                     /locus_tag="OQQ26_000078"
                     /pseudo
     CDS             complement(78719..78988)
                     /locus_tag="OQQ26_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312290.2"
                     /note="catalyzes the conversion of terminal3'-phosphate of
                     RNA to the 2',3'-cyclicphosphodiester; incomplete; partial
                     in the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
     gene            complement(78992..80218)
                     /gene="rtcB"
                     /locus_tag="OQQ26_000079"
     CDS             complement(78992..80218)
                     /gene="rtcB"
                     /locus_tag="OQQ26_000079"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-splicing ligase RtcB"
                     /protein_id="HCS1855708.1"
                     /translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
                     VMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAADLPENLAELRQA
                     IETAVPHGRTTGRCKRDKGAWENPPFNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
                     GTLGTGNHFIEICLDESEQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQDQLETLPSRD
                     LAYFMEGTEYFDDYLRAVAWAQLFSSLNRDAMMENVVTALQSITQKTVRQPQTLAMEE
                     INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
                     CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSD
                     LVEVIYTLRQVVCVKG"
     gene            80407..81930
                     /locus_tag="OQQ26_000080"
                     /pseudo
     CDS             80407..81930
                     /locus_tag="OQQ26_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417880.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-dependent transcriptional regulator"
     gene            complement(81912..82670)
                     /locus_tag="OQQ26_000081"
     CDS             complement(81912..82670)
                     /locus_tag="OQQ26_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HCS1855709.1"
                     /translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
                     EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
                     PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
                     SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
     gene            complement(82687..83517)
                     /gene="glpG"
                     /locus_tag="OQQ26_000082"
     CDS             complement(82687..83517)
                     /gene="glpG"
                     /locus_tag="OQQ26_000082"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HCS1855710.1"
                     /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQ
                     AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVMMI
                     ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
                     "
     gene            complement(83562..83888)
                     /gene="glpE"
                     /locus_tag="OQQ26_000083"
     CDS             complement(83562..83888)
                     /gene="glpE"
                     /locus_tag="OQQ26_000083"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HCS1855711.1"
                     /translation="MDQLECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
                     NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
                     EVAYGA"
     gene            84078..85583
                     /gene="glpD"
                     /locus_tag="OQQ26_000084"
     CDS             84078..85583
                     /gene="glpD"
                     /locus_tag="OQQ26_000084"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HCS1855712.1"
                     /translation="METKDLIVIGGGINGTGIAADAAGRGLSVLILEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYTWQARGLVNATGPWVKQFFDDGM
                     HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
                     GDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAE
                     LKYLVDHEWVRRADDALWRRTKQGMWLNADQQSRVSQWLLEYTQQKLSLAS"
     gene            complement(85852..86082)
                     /locus_tag="OQQ26_000085"
                     /pseudo
     CDS             complement(85852..86082)
                     /locus_tag="OQQ26_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001443257.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein"
BASE COUNT        20728 a        23438 c        21669 g        20330 t
ORIGIN      
        1 ttaacatagt cggcgtgccc cgggcagtct acgtgtgcgt agtgacgggt cggggtgtca
       61 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
      121 atctggtcga atgcacgagc agcaccgccg taggttttag ccagtacggt ggtgattgca
      181 gcggtcagag tagttttacc gtggtcaacg tggccgatag taccaacgtt aacgtgcggt
      241 tttgtacgtt caaatttttc tttagacaca gctatattcc ttactatagt gctctcccct
      301 tcaggagaga gcacgggact ttggtattaa cccttaggct tatttaccac gggcttcaat
      361 tacggcctga gcaacgttac tcggcgcttc atcatacttc aggaattcca tagtgtatga
      421 tgcacgacct ttggtcagag aacgcagctg agttgcgtat ccgaacattt cagacagcgg
      481 tacttcagcg tggatcttaa cgccagtaac ttcagattcc tgacctttga gcataccacg
      541 acgacggctc aagtcaccga taacgtcacc ggtgttctct tccggagttt ctacttcaac
      601 cttcatgatc ggctcaagca gaactggttt cgctttctta aagccttctt taaaggcgat
      661 agaagcagcc agtttaaacg ccagttcaga ggagtcaacg tcatggtaag aaccgaagtg
      721 cagacgaaca cccatgtcta ctaccgggta gcctgccagc ggacctgctt tcagctgttc
      781 ctggatacct ttatcaacgg ccgggatgta ttcgccaggg attacaccgc ctttaatgtc
      841 gttgatgaac tcgtagcctt tcgggtttga acccggctcc agcgggtaca tgtcgataac
      901 aacatgacca tactgaccac gaccaccaga ctgtttcgcg tgtttacctt caacatcggt
      961 aactttctgg cggatagttt cacggtaagc aacctgcggt ttacctacgt tcgcttcaac
     1021 gttgaattca cgcttcatac ggtcaacgat gatgtcgagg tgcagttcgc ccatacccgc
     1081 gatgatggtc tggttagatt cttcgtcagt ccatacacgg aaagacgggt cttctttagc
     1141 cagacggccc agagccagac ccattttttc ctggtcagct ttggttttcg gttcaactgc
     1201 gatggagatt accggctcag ggaattccat acgttccaga atgatcggcg catccgggtc
     1261 acacagggtg tcaccagtgg ttacgtcttt cagaccgata gcagcagcga tgtcgcccgc
     1321 gcgaacttct ttgatctctt cacgtttgtt agcgtgcatc tgaacgatac gaccgaaacg
     1381 ctcacgcgca gctttcacgg agttcagtac ggtatcacca gagttaacca caccggagta
     1441 aacacggaag aaggtcaggt taccaacaaa cgggtcggta gcgattttga acgccagtgc
     1501 agagaacggc tcgtcatcac ttgcgtgacg ctcagccgga gtgtctttac cgtcgtccag
     1561 gataccgttg atcgcaggta cgtcaaccgg ggatggcagg taatcaatta ccgcatccag
     1621 catcgcctga acacctttgt tcttgaacgc agaaccacag gttaccagga tgatttcgtt
     1681 gttcagaacg cgctgacgca gagcaccttt gatttctgct tcagtcagtt cttcaccacc
     1741 caggtatttt tccatcagct cttcagaagc ttcagctgcg gattcgatca ggttctggtg
     1801 ccattcgtta gccagttcaa ccatgtctgc cgggatatct tcgtattcga aggttacgcc
     1861 ctggtcagcg tcgttccagt tgatagcttt cattttcacc aggtcaacaa caccggtgaa
     1921 atgttcttca gcaccaatcg ccagttgcag cggaaccggg ttcgcgccca gacgggtttt
     1981 gatctggtta acaactttca ggaagttcgc acccatgcgg tccattttgt taacgaacgc
     2041 aatgcgcgga actttatatt tgtttgcctg acgccatacg gtttcagact gcggctgaac
     2101 accaccaact gcgcagtaaa ccattaccgc accatcgaga acacgcatgg aacgttctac
     2161 ttcgattgtg aagtcaacgt gccccggggt gtcgatgatg ttgatgcgat gcggctcata
     2221 ctgcttagcc ataccagacc agaatgcagt agtcgcagcg gaagtgatgg taataccacg
     2281 ttcctgctcc tgctccatcc agtccatggt tgcagcgccg tcatgaactt caccgatttt
     2341 atggtttaca ccggtgtaga acagaatacg ttcggtagta gtggttttac cggcgtcgat
     2401 gtgcgcactg ataccgatgt tacggtagcg tgcgatgggt gttgtacgag ccatttgttt
     2461 cctcgtttat cttttaggcg ttcaatttaa gtagcccaaa gcgggctgct tactggaagc
     2521 gcccgcctgg tgactaaaac tccgaaggga ttaccaacgg tagtgtgcga acgccttgtt
     2581 ggcttcggcc atacggtgaa cgtcttcacg tttcttaact gcagtacctt tgttttctgc
     2641 agcatcagaa agttcgttcg ccaggcgcag agccatggat ttatcaccgc gtttacgagc
     2701 agcttcaacg atccaacgca ttgccagagc attacgacga accggacgga cttcaactgg
     2761 tacctgataa gtagaaccac caacgcggcg agacttaact tctacagtcg ggcgcacgtt
     2821 ttcgagagct acttcgaatg cttccagttc agatttacca gagcgctgag ccagggtctc
     2881 cagcgcgctg tatacgatag attcagcagt agatttttta ccatctacca tcaggatatt
     2941 tacaaattta gccagcagtt ctgatccgaa cttcggatcc ggcagaattt tacgctgacc
     3001 aatgacgcga cgacgtggca tggaaatact ccgttgttaa ttcaggattg tccaaaactc
     3061 tacgagttta gtttgacatt taagttaaaa cgtttggcct tacttaacgg agaaccatta
     3121 agccttagga cgcttcacgc catacttgga acgagcctgc ttacggtctt taacgccgga
     3181 gcagtcaagc gcaccacgta cggtgtggta acgaacaccc gggaggtctt taacacgacc
     3241 gccacggatc aggatcacgg agtgctcctg caggttgtga ccttcaccac cgatgtagga
     3301 agtcacttcg aaaccgttag tcagacgaac acggcatact ttacgcagcg cggaattcgg
     3361 ttttttagga gtggtagtat atacacgagt acatacgcca cgtttttgcg ggcatgcttc
     3421 cagcgcaggc acgttgcttt tcgcaacttt gcgagcacgt ggtttgcgta ccagctggtt
     3481 aactgttgcc attaaatagc tcctggtttt agcttttgct tcgtaaacac gtaataaaac
     3541 gtcctcacac aatatgagga cgccgaattt tagggcgatg ccgaaaaggt gtcaagaaat
     3601 atacaacgat cccgccatca ccaggccatc tggctggagt gcttaaccgt aagtctgacg
     3661 aaatcagtat agtcaatggg aatgatgtcg ttcgaaattt gaccagtcaa accgcgggca
     3721 ataaggtctt cgtttagggc atagacctta atgggggcat tacgcagact ttcaaggtag
     3781 cggttaccgt caactgcggc agttacgcca tcttgcaata atagcagttc gtctccttca
     3841 ctgagcagac gcagcagcgc agcaaaatcc gtcagccagg gtgaacgatg taatgtgtgc
     3901 agcataaacg cctcaaaacc tcaaaataac atcgtagttg gcgagttcgc ggcgtaaggc
     3961 atctgcttcg agcggcgtgg cctcgacaac aaagggtgtc tgcggatcta acccgcgttc
     4021 gcgcagtgaa gccgcacaaa cccagcactg ttcaatgtcg tacagaccca acaatttaaa
     4081 agtggcaatg taatcacgcg ccagcactgc atcgggcttt tgtcctggca gcagttgaaa
     4141 aacgccatca gcaataaaga agacggccag atcgtcagtt aatgcggaag ttgccagtaa
     4201 agcatctaaa ccttcccgac cagcagctgt accatgaggt gcagtagaaa aaacaaacgc
     4261 aattcgtttc atcagaactg taccaccctg tcacaggtca gcgaggcttc cgccagcgcg
     4321 ccaagtccgc ttaaggtaaa tcccggctga aggtttgacg aagccagccc cagccttcct
     4381 gcttcagttt catcgacgat accgcggcgt aacgctgccg ctacgcagat attcagcgcc
     4441 acaccatgtt gcgcattcaa ctgttgccag ccgcgcacaa ggtcaaattc gtcgcttgcc
     4501 ggtgaggtca gttggttagc gttatagacc ccttcccgat agaaaaagac gctgcttaac
     4561 tcatggcctt ctactatcag cgcctgcgca aactgaaaag cactactcgc ctgttgcgta
     4621 ccgtatgctg gtccggtcac cacgatggca aaacgcatta cttatcttgc ccctggaaat
     4681 caccgctctt gaactggcgg atgtagagat agacagtgtg tttggagatg ttcaggcggt
     4741 cagcaacctg gttgatcgca tctttaatat cgaagatccc tttctcgtag agattcagca
     4801 cgatctgacg atttttggcg ttattagaaa cattgcgatc ggcattcact tcttcgatgg
     4861 tgaactccag cgtttgggta accagatctt caacagaaga ggcaaagttg acgcttgaac
     4921 cgacatccgg ggtttctggc ggcacaaaag tgctcataat ctgcgagaag ggaacatcaa
     4981 gattcatatt gatgcacagc agaccaatta cacgctgttc gcggttacga atcgcgatag
     5041 tcagggactt cattaatacg ccgcttttgg cgcgagtaaa gtagcattta gaaacgctgc
     5101 tatccgctcc cgtcatatcg tgcagcatac gtagcgccag gtcagtaatt ggcgaaccaa
     5161 tcttccggcc tgtatgttca ccgttagcaa tgcgaatggc tgaacatttt agatcctgca
     5221 aagagtgcaa aacgatttca cagtgggagc caataagcat cgctaacccg tccaccaccg
     5281 cttcgtagga tttcagaata tcaaaatcgg tctggtcgaa aggacgttga tccagtaaat
     5341 ccaactcact ggtttcgttg gttaaaagcg acctggacat gaaaaaaaac actccttttc
     5401 aggagcctgt cgttaacttt tcagggcagg ctcattaatg atgcgggtaa ctaaattaat
     5461 acagcggagg ttccgctttc cagcactaat tatatccggc ctgtaataaa aaaaccgccg
     5521 cctggtcagg cggcggttct taatgcttat tttttagcag aatctgcggc tttcgcatca
     5581 gcttccggct ttgcatcagc cttcggcgct ggtttcacat ccagcagctc tacgtcaaac
     5641 accagggtag aattcggtgg gatccccgga acacccgctt tgccgtaagc cagttctggt
     5701 ggaataacca gtttgatctt accgcctttc ttgatgttct tcagaccttc tgtccacccc
     5761 gggataacac cgtccagacg gaaagagagc ggttcaccac gagtgtaaga gttgtcgaac
     5821 tctttaccgt cgatcagcgt acctttgtag ttcacgacaa cagtatcgct gtctttcggt
     5881 gcttcgcctt taccggcttc tactacctga taaaccagac cagtggaaga ggttttcaca
     5941 cctttctctt tggcaaattt ctcgcggtac tctttacctt ttgcttcgtt atcagccgcg
     6001 tctttttcca tcttcgcctg agcagaagac ttcacgcgag cttcgaatgc ttgcagagtc
     6061 tgttcgatct cttggtcgga gagtttgctc ttatcagcaa atgcatcctg aacaccagcg
     6121 atcagctgat ctttatccag tttgatgcca agtttttctt gttctttaag agagttttcc
     6181 atgtaacgac ccagcgaagc acccagtgca taagctgatt tctgatcgtc atttttgaac
     6241 gctgctttgc tgtcagcagt tgtagcaggt tttgcagctt cagcagcaaa agtgattggt
     6301 gcatgcaggg caacggccat tgtggtcgcc agcagcgtta ctttaaacag tgatttcatc
     6361 catatctcca ggatcggggc atctcaccct agggttaact attatcagaa gggtactata
     6421 aagcgttgtc gaacaaatct acatacagac acgccctatt atcatctatt ttcagactct
     6481 ttttgtttaa attagtttcg acgaccgcga aatgagtgct gtctcgggca gcaaagttaa
     6541 gtagaatccg cggcgaccat tcgacaaaag aggtgaatca tgcaggattt atcattggaa
     6601 gcacgcctgg cagagctgga gagccgactg gcttttcagg aaatcaccat tgaagaactg
     6661 aacgtcacgg tgaccgctca tgaaatggag atggcgaaac tgcgcgatca tctgcgtctg
     6721 ctgaccgaga agttaaaagc cagccagccg tcgaacatcg cgtcgcaggc tgaagaaacg
     6781 ccaccgccac attattgagg cgtaaaaaag cggggattcc ccgctttttt gtcacctttt
     6841 cggtattagt ggcaaccaca accgccgttg cctttaccgc cacagcagcc ttcgccaccg
     6901 tgttcatgac cgtgatcgtg gccatgaccg ccgcagcaac cgtcgtggtg gtgatcgtgc
     6961 gcgccgtgaa cgtggccatg agccagttct tcttcggtcg cttcgcgaat cgccacaact
     7021 tcaacgttga atttcaggtt ctgaccggcc agcatgtggt taccatcaac cacgacgtga
     7081 tcgtcttcaa ccgcagtgat ttcaaccggt accggaccct ggtcggtttc agccaggaaa
     7141 cgcataccta cctgcagttc atcaacgccc ataaatacgt ctttaggaac acgttgcacc
     7201 aggttttcgt cgtactgacc gtaagcgtcg ttcgcgccaa cagcgacatc aaatttgtcg
     7261 ccaacttcat gaccttccag cgccgtttct aggccagaga tcagggaacc gtgaccatgc
     7321 aggtagtcca gcggcgcact caccggagac tcatcaacca acacaccgtc ttctgtacgt
     7381 acctgatagg ccaagctgac caccaagtct tttgctactt tcatgatatc tcctgagcat
     7441 gggaagaata gtggcgcaga ttgtagcgga attctgcagc cgtgtactca ctagcttaaa
     7501 aaaactcggt gcatatcgct agtccggatg aaaaatcccg atcacttgct catctttgcg
     7561 aacgtgatcg cgggcttctt tgtctgcttc tcgcatctga tgtccgcact taacgcattc
     7621 aacaatatca atattatttt cgcgccacat cgccattgaa tcctgtgcct gacaggccgg
     7681 gcattttgcg cccgcaataa aacgttttcg gattgccatc tttaccctct actcaaattc
     7741 atcccagccg tccagttggc gtcgttcttg ttgcatttca cgctggaaaa tctcttccag
     7801 ttcgcgtcgg gcttccctgg cgcgagaaat ttgtacagta tcggcatgca ttgggatgag
     7861 ctctcgcagc atccgcatat ccaggcggcg aaaatgcagt tgcgctcgct gtgcctgatg
     7921 cggatgcatc ccaagcgtga ccagcgtctt gcgccccagc tctaacgcac tggagaatgt
     7981 ttcacgggaa aactgcgtca cccctgcctg taataactca tgcgcttcca cacgtccgcg
     8041 cgctcgcgca agaatatgca aatgcggaaa gtgctgctgg catatttcca ccagcttcat
     8101 ggtgtcttcc ggctcgttac aggtaatgac gatagactca gcggcctctg cacccgcaga
     8161 acgtaaaaga tcgacctgcg tggcgtcgcc gtaataaact ttgtagccgt atttacgcat
     8221 caggttaacg gcgctgatat cccgctccag cacggtaatg cgcattttat ttgccatcag
     8281 caaacgacca atcacctgac caaaacgccc gaagcccacg acaatgacct ggggtttatc
     8341 atcgttgacc cacggttttt cgtcttcttc ttccggtccg ttaaactggc gggatagcca
     8401 tttatccacc agcttcatca gcaacggcgt ggtcatcatg gaaagcgtca ccgtcaccag
     8461 caacaacgcc atctggtcgc cctagaataa gcgttgtgaa gaagcggtag aaaagaggac
     8521 aaaggcaaac tcaccaccct gactcaacac gccagcaaac tgcatccgct ctgagctacg
     8581 cacgccatac aatcgcgcca gcagatacag cacgagaatt ttcaccgcca ccagcacaac
     8641 cacgcttatc actacccaca actgatgggt ataaagcacc ccgaggttga gtgacatccc
     8701 gacagagata aagaacaaac cgagcagcaa gcctttgaag ggatcgatag ccgtttccag
     8761 ttcatggcga tattcacttt ccgccagcag cacgcccgca ataaacgtac cgagcgccat
     8821 cgacagcccc agcacatcca taaacaatgc ggaacccaat accagcagca gcgtcgcggc
     8881 ggtgaacact tcccgcacgc cagaagctgc aataaaacgg aataccggac gcaataaata
     8941 gcgcccgcca atcagcatgc cgacaaacgc cagcaccttc atgccgatct tcatccagtc
     9001 gaaatgttcg tctgccgacc ccgccaacaa cggcactaac gccagtgccg ggatcaccgc
     9061 cagatcctga aacagcagta ccgaaaaccc gagctgcccg gattcgctgc gattcatccc
     9121 tttctcacgc atcagttgca acgccattgc ggtcgaagac atcgcaaggc caatgccacc
     9181 gaccaccgcc gcctgccagg cgaaatccgt cagcatcaat aatcccgcca gcaacgccgc
     9241 gcttaacagt acctgggctg cgccaacgcc aaaaatcgaa cgccgcagtt gccaaagctt
     9301 ggagggattc aactcaaggc cgatgataaa catcaggaac accacgccga gttccgaaaa
     9361 gtggaggatc tcatcgacgt cgctaataaa ccccagcccc cacgggccaa ttgcaatccc
     9421 tgccagcaaa tatcccaaca cagcgccaat ccccagccgc gatgccaacg gcaccgcagc
     9481 caccgccgcg aagagaaaca gcactcctgc gagtaaaaaa tcggaacctt ccatcagcgg
     9541 cctcctggag acagcggatt tgccagccag tcaccgtagg ctctggcgtg gctcgccagc
     9601 tcctgtgcgc tttgccgtct cgcccagtaa ataatgatgg gacttaacca atgcatccgg
     9661 cacatgcccg ccgccagttc aaaggggcgc agcacatcgc tcatcgggta gcgattcagc
     9721 gcgtcataac ggtaagcact ttccggctcg ccggtggtaa tcacgctacg ccagtacttt
     9781 cccgccagtt ggtttcctcc cggcccgctg gcaaaaccac gacttaatac ccggtccagc
     9841 cactctttca gtagcgccgg gcagctatag gtataaagag gatgctgaaa gacaatcacc
     9901 tcgtgctcgc gcagtaatgc ctgctcacgg gggatatcaa taaaaaaatc gggatagtgc
     9961 gcgtaaaggt cgtgcacggt aacattgctg agctgcgtgg ccggtttaag cagtacccgg
    10021 tttgccaccg agtcctgaga ttccggatgg gcatacagca gcaaaacttt cgctggctga
    10081 gacatcatcc ccctcccggt atggtttttg tgtatagtcg ctgttttggg ctaccattgc
    10141 gcccggtgcg gcagctcgcc catacattac attatcataa tgataagtta acatagtctg
    10201 aacatacggc accttatgat tgttttctcc tcgttacaaa ttcgtcgcgg cgtgcgcgtc
    10261 ctgctggata atgccaccgc caccatcaac cctgggcaga aagtcggcct ggtgggtaaa
    10321 aacggctgtg gtaaatctac cctgctggca ttgctgaaaa atgaaatcag cgccgacggc
    10381 ggcagctaca cctttccggg aagctggcaa ctggcgtggg tgaatcagga aacaccggcg
    10441 ttaccgcaag cggcgctgga atatgtcatt gacggcgacc gtgaatatcg tcaactggaa
    10501 gcgcagctac acgacgccaa cgaacgtaac gacgggcacg ccattgcgac cattcatggc
    10561 aagctggatg ctattgacgc atggagtatt cgctcccgtg ccgccagcct gctgcacggc
    10621 ctcggtttca gcaatgaaca actggagcgc ccggtaagtg atttctccgg tggctggcgt
    10681 atgcgtctta accttgccca ggcgctgatt tgccgttcag acttgctgct gctcgacgaa
    10741 ccgactaacc acctcgatct cgatgccgtt atctggctgg aaaaatggtt gaagagctat
    10801 cagggcacgc tgatcctgat ctctcacgac cgcgacttcc tcgatccgat cgttgataaa
    10861 attattcaca tcgaacaaca aagcatgttc gagtacaccg gcaactacag ttcgtttgaa
    10921 gtacagcgcg ccacccgtct ggcgcagcaa caagcgatgt atgaaagcca gcaggaacgc
    10981 gtagcgcatc tgcaaagtta tatcgaccgt ttccgtgcca aagccaccaa agcgaagcag
    11041 gcccagagcc gcattaagat gctcgaacgt atggagctga ttgccccggc gcacgtcgac
    11101 aacccgtttc gttttagctt ccgtgcgccg gaaagcctgc caaatccgtt actgaagatg
    11161 gaaaaggtca gcgcgggcta tggcgatcgc attattctcg actcgattaa actgaacctg
    11221 gtgcccggct cgcgcattgg tctgttaggc cgcaatggcg cgggtaaatc gacattaatc
    11281 aaactgttag ccggtgaact tgcgccagtc agcggtgaaa ttggtctggc gaaagggatc
    11341 aagctcggct acttcgccca gcatcaactt gaatacctgc gcgccgacga atcacctatt
    11401 caacatctgg cacgtttagc gccgcaggag ttggaacaaa aactgcgtga ctacctcggc
    11461 ggctttggtt tccagggcga taaagtaacc gaagaaacgc gccgcttctc aggtggggaa
    11521 aaagcccgcc tggtgctggc attaattgtc tggcagcggc cgaatctgct gctgctcgac
    11581 gaaccgacta accaccttga cctcgacatg cgtcaggcac tcaccgaagc attaatcgag
    11641 tttgaaggtg cgctggttgt cgtctcgcac gaccgtcatt tgctgcgttc caccactgac
    11701 gatctctacc tggttcacga tcgtaaagtc gaaccgttcg acggcgatca ggaagattat
    11761 caacagtggt tgagcgacgt acaaaagcag gaaaaccagg ccgacgaagc gccaaaagag
    11821 aacgcgaaca gcgcccaggc acgtaaagat cagaagcgtc gggaagcgga gctgcgtgcg
    11881 caaacccagc cactgcgtaa agagattgcc cgtctggaaa aagagatgga gaagctgaac
    11941 gcgcaactgg cgcaggcgga agagaaactc ggcgacagcg aactgtatga ccagagccgt
    12001 aaagcggagt tgaccgcctg cctgcaacag caagccagcg ccaaatccgg cctggaagag
    12061 tgcgaaatgg cgtggctgga agcccaggag cagcttgagc agatgctgct ggaaggccaa
    12121 agcaactgat ggcgcagata acgacgaccg atgccaatga attcagcagc agtgctgaat
    12181 tcatccccat gcgcggcttt agcaattgtc atctgcaaac catgctgccg cgtctgtttc
    12241 gtcgtcaggt gaaattcacc ccgtactggc agcggctgga gttgcccgac ggcgattttg
    12301 tcgatcttgc gtggagtgaa aaccctgcac aggcgcaaca taaacctcgt ctggtggtgt
    12361 ttcacgggct ggaaggcagt ctcaatagcc cttacgccca cggtctggtt gaggcggcgc
    12421 aaaagcgcgg ctggctgggc gtggtgatgc attttcgcgg atgcagcggt gaaccaaacc
    12481 gtatgcaccg catttaccat tcgggcgaaa ccgaagacgc cagttggttt ttacgctggc
    12541 tgcaacgcga atttggtcat gcgccaacgg ctgccgtcgg ctattcgctc ggcggtaata
    12601 tgctggcctg tttgctggca aaggaaggca atgatctccc ggttgatgcg gcgttgattg
    12661 tctctgcacc gtttatgctg gaagcctgta gctatcatat ggaaaagggc ttttcccgcg
    12721 tttatcagcg ttacttgctg aacctgttaa aagccaatgc cgcacgcaag ctggctgcct
    12781 accccggaac tctgccgata aatctcgcgc aattaaaatc ggtacgtcgc atccgtgaat
    12841 ttgacgatct aatcaccgcc aggattcacg gctacgctga cgctatcgac tattatcgtc
    12901 agtgtagcgc catgccgatg ctgaaccgga tcgccaaacc gacgctgatt attcacgcca
    12961 aagacgatcc gtttatggat catcaggtga tcccgaaacc ggaaagtctc cccccgcagg
    13021 tggagtatca actgactgaa catggcggtc atgttggctt tattggcggt acattacttc
    13081 atccgcaaat gtggctggag tcacgcattc ctgactggtt aacaacgtat ctggaggcga
    13141 aatcatgttg attccgtggc aagacctctc ccccgaaacg ctggaaaatt taattgaaag
    13201 ctttgtgtta cgtgaaggca ccgattatgg tgaacatgag cgtacacttg aacagaaagt
    13261 cgccgacgtc aaacgccagc tacagtgcgg agaagcggtg ctggtatggt cagagctgca
    13321 cgaaacggtc aatatcatgc cgcgcagtca gtttcgcgaa taacctgcaa ccgtcggcgg
    13381 acgagataat aatgatagct aagtcatgga gttactatgt ctgccaaaca tccggtcatt
    13441 gcggtaacag gatccagcgg cgcggggacc accaccacca gcctcgcgtt tcgtaaaata
    13501 ttcgcgcagt taaatctgcg tgcagctgag gtggaaggcg acagttttca ccgttacacc
    13561 cgcccggaaa tggacatggc gatccgcaaa gcgcgcgacg ccgggcggca tatcagctac
    13621 ttcggccccg aagcgaacga cttcggcctg ctggaacaaa ccttcattga atacggtcag
    13681 agcggcaaag ggaaatctcg caaatatctg catacctacg atgaagccgc accgtggaat
    13741 caggtaccgg ggacattcac cccctggcaa cctttaccgg aacccactga tgtactgttt
    13801 tatgaaggtt tacacggcgg cgtagtcacg ccacagcata acgttgcgca gcatgtggac
    13861 ttattggtcg gcgtggtgcc tatcgttaac cttgagtgga ttcaaaaact gatccgcgac
    13921 accagcgagc gcgggcactc acgagaagca gtgatggact cggtagtgcg ttcaatggaa
    13981 gactatatca actacatcac accgcagttt tcccgcaccc atcttaactt ccagcgcgtt
    14041 cccaccgtcg acacgtcaaa cccgttcgcg gcaaaaggta tcccgtcgct ggatgaaagc
    14101 tttgtggtga tccattttcg taatctggaa gggatcgatt tcccctagct gctggcgatg
    14161 ttgcaaggct cattcatttc ccacatcaat acgttagtgg tgcccggcgg caaaatgggt
    14221 ctggcaatgg aattaattat gctgccgctg gtgcaacgat tgatggaagg aaagaaaatc
    14281 gagtaactct gctattacgc cggataaaat actatccggc ttcacaacgg gatagttaaa
    14341 tcacgcggca accacttcat acgagtgagt aatattcacc gctttttcca gcatcaacgc
    14401 cactgaacaa tatttctcgg cagagagatc aaccgcacgc gcaaccgctg cgtctttcaa
    14461 gtcgcgaccg gtgacgatga aatgcagatt aatgtgcgta aacaggcgtg gtgcctcttc
    14521 gcggcgttca gaggtcaatt ttacttcaca atcgaccaca tcctgacgcc ctttttgcag
    14581 gatagatacc acatcaatcg cgctacagcc acccgccgcc atcaacacca tttccatcgg
    14641 acttggtgct ttatcgcctg agttgccgtc cattaaaatc tgatgaccag aggcggattc
    14701 gcccagaaaa gttaaccctt cgacccactt cactcgcgct tgcatttttg ctactccact
    14761 gcgtcaattt tcctgacaga gtacgcgtac taaccaaatc gcgcaacgga aggcgacctg
    14821 ggtcaggctg aagcgagaca ccaggagaca caaagcgaaa gctatgctaa aacagtcagg
    14881 atgctacagt aatacattga tgtactgcat gtatgcaaag gacgtcacat taccgtgcag
    14941 tacagttgat agccccttcc caggtagcgg gaagcatatt tcggcaatcc agagacagcg
    15001 gcgttatctg gctctggaga aagcttataa cagaggataa ccgcgcatgg tgcttggcaa
    15061 accgcaaaca gacccgactc tcgaatggtt cttgtctcat tgccacattc ataagtaccc
    15121 atccaagagc acgcttattc accagggtga aaaagcggaa acgctgtact acatcgttaa
    15181 aggctctgtg gcagtgctga tcaaagacga agagggtaaa gaaatgatcc tctcctatct
    15241 gaatcagggt gattttattg gcgaactggg cctgtttgaa gagggccagg aacgtagcgc
    15301 atgggtacgt gcgaaaaccg cctgtgaagt ggctgaaatt tcgtacaaaa aatttcgcca
    15361 attgattcag gtaaacccgg acattctgat gcgtctgtct gcacagatgg cgcgtcgtct
    15421 gcaagtcact tcagagaaag tgggcaacct ggcgttcctc gacgtgacgg gccgcattgc
    15481 acagactctg ctgaatctgg caaaacaacc agacgctatg actcacccgg acggtatgca
    15541 aatcaaaatt acccgtcagg aaattggtca gattgtcggc tgttctcgtg aaaccgtggg
    15601 acgcattctg aagatgctgg aagatcagaa cctgatctcc gcacacggta aaaccatcgt
    15661 cgtttacggc actcgttaat cccgtcggag tggcgcgtta cctggtagcg cgccattttg
    15721 tttcccccga tgtggcgcag actgatttat caccccgata ttaactatgc actacgacaa
    15781 acgctggtgc tatgtttgcc cgtggccgtt gggttaatgc ttggcgaatt acgattcggt
    15841 ctgctcttct ctctcgttcc tgcctgttgc aatattgcgg gccttgatac gcctcataaa
    15901 cgttttttca aacgcttaat cattggtgcg tcgctgtttg ccacctgtag cttactgaca
    15961 cagctgctac tggcaaaaga tgttcccctg ccctttttgc tgaccggatt aacgctggta
    16021 cttggcgtca ctgctgagct ggggccattg cacgcaaaat tgcttcccgc atcgctgctc
    16081 gccgccattt ttaccctcag tctggcggga tacatgccgg tctgggaacc attgctcatc
    16141 tatgcgttgg gcactctctg gtacggattg tttaactggt tttggttctg gatctggcgc
    16201 gaacaaccgc tgcgcgagtc actaagtctg ctgtaccgtg aactggcaga ttattgtgaa
    16261 gccaaataca gcctgcttac ccagcacacc gaccctgaaa aagcgctgcc gccgctgctg
    16321 gtacgccagc aaaaagcggt cgatctaatt acccagtgct atcagcaaat gcatatgctt
    16381 tccgcgcaaa ataatactga ctacaagcgg atgctgcgta ttttccagga ggcgctggat
    16441 ttgcaggaac atatttcggt cagtttgcat cagccggaag aggtgcaaaa actggtcgag
    16501 cgtagccatg cggaagaagt tatccgctgg aatgcgcaaa ccgtcgccgc tcgcctgcgc
    16561 gtgctggctg atgacattct ttaccatcgc ctgccaacgc gttttacgat ggaaaagcaa
    16621 attggcgcac tggaaaaaat cgcccgccaa cacccggata atccggttgg gcaattctgc
    16681 tactggcatt tcagccgcat cgcccgcgtg ctgcgcaccc aaaaaccgct ctatgcccgt
    16741 gacttactgg ccgataaaca gcggcgaatg ccgttacttc cggcgctgaa aagttatttg
    16801 tcactaaagt ctccggcgct acgcaatgcc ggacgactca gtgtgatgtt aagcgttgcc
    16861 agcttgatgg gcaccgcgct acatctgccg aagtcgtact ggatcctgat gacggtattg
    16921 ctggtgacgc aaaatggcta tggcgcaacc cgtctgagga ttgtgaatcg ctccgtggga
    16981 accgtggtcg ggttaatcat tgcgggcgtg gcgctgcact ttaaaattcc cgaaggttac
    17041 accctgacct tgatgctgat taccaccctt gccagctacc tgatattgcg caaaaactac
    17101 ggctgggcga cggtcggttt tactattacc gcagtgtata ccctgcaact gttgtggctg
    17161 aacggtgagc agtacatcct tccgcgtctt atcgatacca ttattggttg tttaattgct
    17221 ttcggtggta ccgtctggct gtggccacag tggcagagcg ggttattacg taaaaacgcc
    17281 catgatgctt tagaagccta tcaggaagcg attcgcttga ttctgagcga ggacccgcaa
    17341 ccaacgccac tggcctggca gcgaatgcgg gtaaatcagg cgcataacac tctgtataac
    17401 tcattgaatc aggcgatgca ggaaccggca ttcaacagcc attatctggc agatatgaaa
    17461 ctgtgggtaa cgcacagtca gtttattgtt gaacatatta atgccatgac cacgctggca
    17521 cgggaacacc gggcattgcc gcctgaactg gcgcaagaat atttgcagtc ttgtgaaatc
    17581 gccattcagc gttgtcagca gcgactggaa tatgacgaac cggggagttc tggcgatgcc
    17641 aatatcatgg atgcgccgga gatgcagccg cacgaaggcg cggcaggtac gctggagcag
    17701 catttacagc gggttattgg tcatctgaac accatgcaca ccatttcgtc gatggcatgg
    17761 cgtcagcgac cgcatcacgg gatttggctg agtcgcaagt tgcaggattc gaaggcgtaa
    17821 tgcaggctaa accatcggat aaggcattca cgccgcatcc gacatctttt gcctgatgcg
    17881 tcttatttac gccccaacca ccttcgccac cgcgtgggcg aaacgttgca tcccttcatc
    17941 gatatccgca tcttccacca ccagcgacgg tgcaaaacgc atcacatccg gtccggcatt
    18001 cagcaccatt accccagcct ctgcgcccgc atacaggaaa tcacgcgccc gacctttgta
    18061 ctgtggtttc agctccgcgc caattaacag ccccataccg cgaatatcgc taaacacatc
    18121 gtactgctga tcgatcttct gcaaatggtc aacaaaacgc tggcgtttcg cctgaatgcc
    18181 ttccagcact tcaggggtat tgatgatatc aaacgccgcg cccgctactg cacaggccag
    18241 aggattaccg ccgtaggtgg aaccgtgaga accaggatga aacgcagaag caatttccgc
    18301 cgtggtcagc atggcgctaa tcgggaagcc gccgcctaac gctttcgcag aggtcagaat
    18361 atccggcgtc acaccgtagt gcatgtaagc aaacaaatcg ccagtccgtc ccatcccgca
    18421 ctgcacttca tcaaacacca ataatgcctg atgttgatcg cacagctcgc gcaagccctg
    18481 caaaaactct ggcgtcgcag ccgtcacgcc gccctcgccc tggatcggct caaccaccac
    18541 cgcacaggtg tgatcatcca tcaccgcttt cactgcgtgg agatcgttaa agggaacgtg
    18601 gatgatgtct gccggtttcg gcccaaagcc gtcggaatat tttggctgcc cacccaccga
    18661 aacggtaaac agcgagcgac catgaaaagc gttatggaag gcaataattt tggttttgaa
    18721 cgggctatga cgcacacagg cgtaatggcg tgccagttta aaggcggttt cgttagcttc
    18781 cgtgccggag ttcataaaca ccacgcgttc ggcaaacgtc gcctcaatca gtttgcgccc
    18841 aagacgcagc gccggttcat tggtgaaaac gttactgata tgccacagag tttcgccctg
    18901 ggtttttaac gcgttcacca gcgcaggatg gcaatggccc aacgccgtaa ctgcaatgcc
    18961 acccgcgaaa tcgacatact ccttgccttg ctgatcccag attcggctgc cctgaccttt
    19021 taccggaatg aactctgccg gagcataaat cggcaggatc acttcatcga aagtcgcgcg
    19081 tgtaattgct gtttgttcaa ttgccatctc atgatcaccc tgttacgcat aaataaatgt
    19141 gaaattataa tcacaaaata tgcataaaaa atcactgaat ggcaatcaga aatcagcgat
    19201 gcaggaaatt agccagcagt tgatgtcctt gttcgctaag aatactttct ggatggaact
    19261 gcacaccttc cagatcccac tggcgatggc gaatccccat aatctcgcgg gtttcgctcc
    19321 aggccgtcac gtcaaagcac gctggtaatg agccaggttc caccaccagc gaatggtagc
    19381 gtgtcacggt aagtggattt gccagccccc gaaatacgcc ctcaccgtta tgtgtaatcg
    19441 gcgaggtttt accgtgcatg acctttgcgg cgcgcacaac tttaccgcca aatgcctgcg
    19501 ccattgcctg atgaccgagg cagacgccaa gaatcggcaa gcgcccggca tagtggcgaa
    19561 taacgtcaag ggagatcccg gcttcatctg gcgtacaggg gccgggtgag atgacaattt
    19621 tttgtggttt aagggcgtcg atatccgcca acgtcaacgc atcgttgcgc ttaaccagca
    19681 catctgcccc cagttcacaa aagtactggt agaggttcca ggtaaaagaa tcgtagttat
    19741 caataagcag gatcatggcg gctccggtac gaaagaaccg cgctatttta ctcagattcc
    19801 ccggcttcgc ttaccacttt gctaaatatc atctgcagtg cggtgagatc ccccattgcc
    19861 ccactctgat ttgcctgatt ccaggcctct ttttcgatac cctgccagct cagttgatat
    19921 ccggcatgaa tcgccagttg ctcgaagaag atccgctgtg ccagaccact tcccacccgg
    19981 aagggatgca gcacgttgat ttcacaatag taatgcgcca gccgctcgac gaacttcgtt
    20041 ttctccaggc caaccagata accttcttcc tccagatcct gcatcagggc attgccctct
    20101 ttttcgatat aagcaaagtg gcagaacggc gtatcgccct gataaatatc aacttcacgc
    20161 agttgccctg cccagtcgaa aatatcctga tacagctggc gatggatagt tcgcaaatgc
    20221 ggtaaaccgc gcaccagcgg accaagctca atggtcgcag cacgcagcgc cgtcatttcg
    20281 taagcggcct gttccagccg ttgttgctgg cggatgttca gccggttacg catgatatca
    20341 aggcctggat aaagatacgg atcgcgccct tcgccgaatt tatcgctcat agtgcctcct
    20401 cagctctaca aggcgcgcta aagcctctgc ggcagtaaga gtgactaaag gcatctcgac
    20461 gccttcaaga cggcgactgg cctggaaatt acgattacgc tgaagctccc agagacggga
    20521 cttttgctta tcggtgagtt tcttcacttg atgcctccct gaacgtgtcc atttgccaca
    20581 agtataagcg gcaaatccgg gttacgccgg gagagcagaa gcgcgggcaa gattgcccgc
    20641 gcgagaaatc attacggcag gactttagcg gaaaggataa ctaccggttt tgacggcaca
    20701 ttctggtacg gaccaacgtc atgagtcggc acctgggaaa tcttatcggc cacgtccatg
    20761 cctttcacca ctttaccaaa taccgcgtaa ccgaaatcac gctgaccatg gtcaaggaag
    20821 gcgttatcgg caacattgat aaagaactgg ctggtggcgc tgtctttgtc agcggtacgc
    20881 gccatcgcga tggtgccacg cgtgttgcgc aggccgttat cggcttcatt tttgattggc
    20941 gggtttggtt ttttctgctg catctgctcg gtgaaaccgc cgccctgaat cataaagcca
    21001 ggaatgacgc ggtgaaaggt agtgttgtta taaaaaccgc tgttcacata atcgacaaag
    21061 ttttgcacag acactggcgc tttttgttta tccagctcca gttcgatgtt accagctgag
    21121 gttgtcaaca atacgtgcgg gtcccctttc gctgccattg ctgcgggaga aagagcagaa
    21181 agagcgaaaa cagcagccat cgccgccagg gtcgatttga acatgagatt tccttaacaa
    21241 acagagcaga aaaaaagcaa gtgaagaaat tctaaatagc cttcaagaac aaggccatcc
    21301 ctttacctaa ttttacgtat ctgaaatata tgtaacctga cgatcacttt ttattccgtg
    21361 atcaaaatca cctcttaaaa tgcaatttag caaccgattg caataaaaca tttaaacaga
    21421 tcacaaaatc acctaaaatc gcccgctcgc ggcatagccc gctatgccat tttatttttg
    21481 aacgcaggcc aatcatgact aacagcaatc gcatcaagct cacatggatt agctttctct
    21541 cctacgcact gactggtgcg ttggttattg tcaccgggat ggtgatggga aatatcgccg
    21601 attatttcaa tctgcctgtt tccagtatga gtaatacctt caccttcctc aacgccggca
    21661 ttttaatctc tatcttcctc aacgcctggc tgatggaaat cgtcccgttg aaaacgcagt
    21721 tacgttttgg ctttctcctg atggtgctgg cggttgccgg tttgatgttc agccacagcc
    21781 tggcgctgtt ctcggcggcg atgttcattc tcggggtggt cagcggcatc accatgtcga
    21841 ttggtacatt cctggtaaca caaatgtatg aagggcgtca gcgcggttcc cgcctattat
    21901 ttaccgactc cttcttcagt atggctggga tgattttccc aatgatcgcc gcatttctgc
    21961 tggcccgcag cattgagtgg tactgggttt atgcctgcat cgggctggtg tatgtcgcta
    22021 tttttattct gaccttcggc tgtgagttcc cggcactggg caaacatgca ccaaaaacgg
    22081 atgctccggt agcgaaagaa aagtggggga tcggcgtact gtttctctct gttgcggcgc
    22141 tgtgctacat cctcggtcag ttaggtttta tctcctgggt gccggaatat gccaaaggcc
    22201 tgggcatgag cctgaatgat gctggcacgc tggtgagtaa cttctggatg tcatatatgg
    22261 tcggcatgtg ggcgttcagc tttattcttc gcttctttga tttgcagcgc attctgaccg
    22321 tactggctgg tctggctgcg attctgatgt acgtctttaa caccggaaca ccggcacata
    22381 tggcgtggtc aattctcgcc ctgggcttct tctccagcgc gatctatacc accatcataa
    22441 ctttgggttc acagcagacc aaagtaccat cgccaaaact ggttaacttt gtcctgacct
    22501 gcgggaccat cggtactatg ttgacctttg tggttaccgg ccctattgtt gaacatagcg
    22561 gtccacaggc ggcactgctt acagcaaacg gtctgtacgc tgtcgtcttt gtgatgtgct
    22621 tcctgttagg tttcgtcagc cgtcaccgtc agcataacac cctgacctct cattaattgc
    22681 tcatgccgga cggcactatc gtcgtccggc cttttcctct cttcccccgc tacgtgcatc
    22741 tatttctata aacccgttca ttttgtccat tttttgcaca aacatgaaat gtcagacaat
    22801 tccgtaactt aagaaaattt atacaaatca gcaatatacc ccttaaggag tatataaagg
    22861 tgaatttgat ttacatcaat aagcggggtt gctgaatcgt taaggtaggc ggtaatagaa
    22921 aagaaatcga ggcaaaaatg agcaaagtca gactcgcaat tatcggtaac ggtatggtcg
    22981 gccatcgctt tatcgaagat cttcttgata aatctgatgc ggccaacttt gatattaccg
    23041 ttttctgtga agaaccgcgc atcgcttatg accgcgtaca cctctcgtct tacttctctc
    23101 accacaccgc cgaagagctg tcgctggtgc gcgaaggctt ctacgagaaa cacggcatca
    23161 aagttctggt cggcgaacgc gctatcacca tcaaccgtca ggagaaggtg attcactcca
    23221 gcgccggacg taccgttttt tatgacaagc tgatcatggc aaccggttcc tacccgtgga
    23281 tcccaccaat caaaggttct gatactcagg actgctttgt ctatcgcacc attgaagacc
    23341 tcaacgccat tgaatcctgc gcccgtcgca gcaaacgcgg tgccgttgtt ggtggcggcc
    23401 tgttaggtct ggaagccgct ggcgcgctga aaaacttagg tattgaaacc cacgttatcg
    23461 aatttgcccc tatgctgatg gcggaacagc ttgatcagat gggtggcgag cagctgcgtc
    23521 gcaaaatcga aagtatgggc gtgcgcgttc acaccagcaa aaacaccctt gagattgtgc
    23581 aggaaggtgt cgaagcgcgt aaaaccatgc gttttgccga cggcagcgaa ctggaagtcg
    23641 actttatcgt cttctctacc ggtatccgtc cgcgcgataa gctggcaacc cagtgtggtc
    23701 tggacgttgc tccgcgtggg ggtattgtca ttaatgattc ctgccagact tccgatccgg
    23761 atatctacgc catcggtgaa tgcgcaagct ggaacaaccg tgtatttggt ctggtagcac
    23821 caggctacaa aatggcgcag gtcgccgttg accatattct gggtagcgaa aacgcctttg
    23881 aaggtgctga ccttagcgcc aagctgaaac tgctgggcgt agacgtaggt ggtattggtg
    23941 atgcgcacgg tcgcacgcct ggcgcacgta gctatgttta cctcgacgaa agtaaagaga
    24001 tctacaaacg cctgattgtc agcgaagaca acaaaaccct gctcggtgcg gtactggtgg
    24061 gcgataccag cgactacggc aacctgctgc aactggtgct gaacgctatc gagctgccgg
    24121 aaaacccgga ttctctgatt ctgccggcgc actcgggtag cggtaagccg tctatcggtg
    24181 ttgataaact gccggacagc gcgcaaatct gctcctgctt cgacgtcacc aaaggtgatc
    24241 tgattgctgc catcaacaaa ggctgccaca ccgttgcggc gctgaaagct gaaaccaaag
    24301 cgggtactgg ctgcggtggc tgtatcccgc tggtcactca ggtactgaac gcggaactgg
    24361 cgaaacaggg catcgaagtt aacaacaacc tgtgcgaaca ctttgcttat tcgcgtcagg
    24421 aactgttcca tttgatccgc gttgaaggca ttaaaacctt cgaagaactg ctggcgaaac
    24481 acggcaaagg ttacggttgt gaagtttgta aaccgaccgt cggttcgctg ctggcctcct
    24541 gctggaacga atacattctg aagccggaac atactccgct gcaggattct aacgacaact
    24601 tcctcgctaa catccagaaa gacggaacct actcggtgat cccgcgctct ccgggcggtg
    24661 aaatcacccc ggaaggactg atggcagtgg gtcgtatcgc gcgtgaattt aatctctaca
    24721 ccaaaatcac cggctctcag cgcctggcga tgtttggcgc acagaaagac gatctgccgg
    24781 agatctggcg tcagctgatt gaagccggat tcgaaaccgg tcatgcctat gcgaaagcac
    24841 tgcgtatggc gaaaacctgc gtgggtagca cctggtgccg ctacggcgtg ggcgacagcg
    24901 tgggcctcgg cgtggaactg gaaaaccgct acaaaggcat ccgtacgccg cacaaaatga
    24961 agttcggtgt ctccggctgt acccgtgaat gttcagaagc tcagggtaaa gacgtgggta
    25021 tcatcgccac tgaaaaaggc tggaacctgt atgtttgcgg taacggcggc gtgaaaccgc
    25081 gtcatgcgga tctgctggcg gcggatatcg atcgcgaaac gctgatcaaa tatctcgacc
    25141 gcttcatgat gttctacatc cgtaccgccg acaaactgac gcgtaccgcg ccatggttag
    25201 aaaacctcga aggcggcatc gattacctga aagcggtgat cattgacgac aaactggggc
    25261 tgaacgctca tctggaagaa gagatggcgc gcctgcgtga agcggtagtg tgtgagtgga
    25321 ccgaaacggt caatacgccg tctgcgcaga ctcgcttcaa acacttcatc aacagcgaca
    25381 agcgtgatcc gaacgtgcag atggtgccag agcgcgaaca gcaccgtccg gcaacgccgt
    25441 atgaacgtat tccggtaact ctggtggagg acaacgcatg agccagtgga aagacatctg
    25501 caaaatcgat gacatcctgc ctgaaaccgg cgtctgcgcg ctgttaggtg acgagcaggt
    25561 agcgattttc cgcccgtatc acagcgacca ggtgtttgcg atcagcaaca tcgatccgtt
    25621 cttcgagtcc agcgtgctgt cacgcgggct aattgcggaa caccagggcg agctgtgggt
    25681 cgccagcccg ctgaaaaaac agcattttcg cttaagcgac ggcttgtgca tggaagacga
    25741 acagttttcc gtcaagcatt acgaagcacg agtgaaagac ggcgtggtgc agctgcgcgg
    25801 ttaatgtttt aacgggaggc gcaatgcctc ccctttttgc atggtcctgt aatgaccttc
    25861 ggtatattac aggacatttt ttaaactttt tgttttattt tttgttttta ttttttaaaa
    25921 ggataatcaa atgtttacag acactattaa taagtgtgcg gctaatgctg cgcgcattgc
    25981 acgcctgtcg gcaaataacc cgctcggctt ttgggtcagc tccgccatgg cgggcgcgta
    26041 tgtgggtctt gggatcatcc tgattttcac gctcggtaat ttgctcgatc cgtccatacg
    26101 tcctctggtg atgggcgcga cctttggtat cgccttaacg ctggtgatta tcgccggttc
    26161 tgaactgttc accggacaca ccatgttcct cacctttggg gtgaaagcgg gcaccatcag
    26221 ccacgggcaa atgtgggcaa tcctgccgca aacctggctg ggtaatctgg tcggttccgt
    26281 cttcgttgcc atgctctata gctggggtgg cggtagcctg ctgccggtag ataccagcat
    26341 cgttcactcc gtcgcgctgg ctaaaactac tgcaccggca atggtactgt tcttcaaagg
    26401 tgcattgtgt aactggctgg tttgtctggc aatctggatg gcgctgcgca ctgaaggggc
    26461 ggcgaaattt atcgctatct ggtggtgtct gctggcattt atcgcgtccg gctacgagca
    26521 ctccatcgct aacatgacgc tgttcgccct ctcctggttc ggcaaccaca gcgaagccta
    26581 cacgctggcg ggtattggtc ataacctgct gtgggtgacg ctgggtaata ctttatcggg
    26641 tgccgtattc atgggattgg gttattggta tgctacgccg aaagcgaatc gtccggttgc
    26701 ggacaaattt aatcaaactg aaacggctgc cggttaatta ctaaggggtt tttacgtgga
    26761 tcatttgcct atattttgcc aattacgcga tcgcgactgt ctgattgtcg gcggtggtga
    26821 tgtcgcggaa cgcaaagcaa ggttgctgtt agacgcaggc gctcgcttaa cggtgaatgc
    26881 attagcgttt attccacagt tcaccgcatg ggcagatgca ggcatgttaa ccctcgtcga
    26941 agggccattt gatgaaagcc ttctcgacac ctgctggctg gcgattgcag cgacggatga
    27001 tgacgcgctt aaccagcgcg tcagcgaagc cgctgaagtt cgtcgcatct tctgtaacgt
    27061 ggtcgatgcg ccgaaagctg ccagctttat tatgccgtcg attattgacc gctcaccgct
    27121 catggtagcg gtctcctctg gcggcacctc tccggttctg gcacgcctgt tgcgcgaaaa
    27181 acttgaatca ctgctgccgt tacatctggg ccaggtagcg aaatacgccg ggcaattacg
    27241 cggtcgagtg aaacaacagt tcgccacgat gggtgaacgt cgccgtttct gggaaaaatt
    27301 gttcgttaac gaccgcctgg cgcagtcgct ggccaacaac gatcagaaag ccattactga
    27361 aacgaccgaa cagttaatca acgaaccgct cgaccatcgc ggtgaagtgg tactggttgg
    27421 tgcaggtccg ggcgatgccg ggctgctgac actgaagggt ctgcaacaaa ttcagcaggc
    27481 agatgtggtg gtctacgacc gtctggtttc tgacgatatt atgaatctgg tacgccgcga
    27541 tgctgatcgc gttttcgtcg gcaaacgctc gggataccac tgcgtacccc aggaagagat
    27601 taaccagatc ctgctgcggg aagcgcaaaa aggcaaacgc gtggtgcggc tgaaaggtgg
    27661 cgatccgttt atttttggcc gtggtggcga agagctggaa acactgtgca acgcgggtat
    27721 tccgttctcg gtggttccgg gtattaccgc agcttctggt tgctctgcct attcaggtat
    27781 tccgctcacg catcgcgatt atgcccagag cgtgcgctta attaccggac acttaaaaac
    27841 cggtggcgag ctggactggg aaaacctggc ggcagaaaaa cagacgctgg tgttctatat
    27901 gggattgaat caggccgcga ctattcagca aaagctgatt gaacacggta tgcctggcga
    27961 aatgccggtg gcaattgtcg aaaacggaac ggcagtcacg cagcgcgtga ttgacggtac
    28021 gctcacgcaa ctcggtgaac ttgctcagca aatgaacagt ccatcgctaa ttattattgg
    28081 tcgggttgtt ggcctgcgcg ataaactgaa ctggttctcc aaccattaat ttaacccggg
    28141 ccagagaatt ctggccttct taatgactct ttttatatat tcagcaaata aaacataacc
    28201 tcttaataaa tattatctgc taatgggtta tattcaccgt tacagtgact tacaaaatta
    28261 agtcattcgc tcactgacgc caattaaata ttcctgtatc gttcttaatg agcagtctgc
    28321 ttatattcat atactcaatg aatattaatt aatatataat acatagggaa tgtaaatgaa
    28381 caaatttatt aaagttgcac tggtaggtgc agtactggct acgttaactg catgtactgg
    28441 tcatattgaa aaccgtgata agaactgctc ttacgactac ctgctgcacc cggcaatttc
    28501 tatttctaaa atcattggcg gttgcggtcc tactgcacag taagtctctg acagaaatcg
    28561 gctaacaccg gtttaattgc ccgacgccct ctggattttc cgagggcgta tttatttctg
    28621 cattcttttc gaaaacatca ttcacaagat taaatactgg caatactctc acgcaaaatc
    28681 cgcagcaccg tctcttcacc gctgcgattc ggattaatgc gaatcgagca atgttctgat
    28741 tgcggattcg cctggcggaa tgttccagaa agtcgataaa agagcggcgg gatttcatat
    28801 ttcgactctg cacccaccgg gtaaggccag gcaccgcgct tttcacttcc gccaccgcgc
    28861 cgccgttaag caaagccagc aaccgttcgg atactcccgc ctgcaccgca tgcatcactg
    28921 gcgcgaacac cagaccacgc aagacttcca gcgcctgtga gccctggatc tgactaccgc
    28981 cggagtaaag cgtggcgcga atccgactaa taacatcggc atcgccaacc acagcaccaa
    29041 cgccctccgg cccaaacagc ttgaagcagg agaatgtcga gacattcgcg ccgcattcac
    29101 agccgattcg cgctaccttc atcaccgcat agttatcatc ggttaacact ggaacacctg
    29161 ccgcgcgcaa cgttgccagc acatctgcca gcacatagct gtcctgcggc tgctggcgcg
    29221 tatgctgcac cagcgcggca tcaggttgtt gctcgtcgac gacctgcttc agtgccgaca
    29281 ggtcattgaa atcagcagta ataagcgtca gccccatctg ctcaataata acccgtgtcg
    29341 tcgggtaaac aggcgcgtca tgcaccagaa gacgctgccc cggtttgagc aaagccgcca
    29401 gcccggcgcg aatcgcgcca gtccccgcgc cctgcaccag cgccgcggcc tgtgcgtgaa
    29461 atgcatcagc cagcacctgc tccacccgtt gggtaatacg cggttgattc agacctggag
    29521 ttaaccctaa atcaccgcca gcaagaaact cgctgccggg aaaatggcgg caaatagtgt
    29581 ccaccagcgc aaactgcttt tgctgcgctt cagcaagagt caggctttgc aaaggaaacg
    29641 tcttcatagg tgccttcctt aagccggaac gaacaggcca agccagtaaa gaacattcag
    29701 cagaataccg gtgatcatta ctgccacgac cggtgccgcc attttctgta ccggacggcc
    29761 cagggattcg ttgaggaagt aaatggcaac cgcgatagag aatccggtat aacccgccat
    29821 cttaattgct gcgaaaatcg aaccgaccag cagcgccact tccatcagca tattcatggc
    29881 gttacggatg ttatccgacg cattacgcac cgacgggtag cgtcccagcc atttgccgat
    29941 cgaacgaagc agcaagactt ccgccgaaat aaccactgcg cctaataccg ctgcaaccat
    30001 cggattcggc gagagatagc ccaccgcata aacaaaggta aagcccgcaa ctgcatacac
    30061 acccgttgct aaggcgatgg tggcaatcaa cggtacaaaa cccagcccgc gcataaattc
    30121 tgccagtgcc gcctggttga tcagcgtttg cgattgttcc ggcgttacgc ctgcggagta
    30181 cgctttctcc agagtgaaga tcgacacttc actgccggcg aaaatcttca tactggcaac
    30241 ggcggcaatc aatgctctca cgatggcgat atacggtaag tttttgataa tccgcgacgt
    30301 gcgctcttca aacaccgaaa gcccgctggc atcgatgtca ttttcatcac gatgacgcag
    30361 atcgtgagtt atcgcgatcc ccagcagcat caccatgcca ataaagattt cgatggattc
    30421 agggttaaga tgtgggaaat agcgcacgac taccacacgg gccatcagaa caaccacggc
    30481 ggcgatcaga ctttgcttcc agccaaactg gtagaaaatc gccaccagcg ggaacagtgc
    30541 aaaagctgaa accaccggcg agcttaattc cccgaggcta cctaatacat ccaccggcag
    30601 cgcggtcagc agctggttta ctggcaacag gcaagtaagg atcaacacgc cccagatagc
    30661 gccaagacca aacgccatca ggctgtttat cgccaggacg ccgaggatat cggtaggaag
    30721 aaagagtaac catgcgttga gcagcccggt tttcagggta aaagagatcc ccaccgaggc
    30781 cacaaaacca atgctcagac caaaagcgat actccccgcc tcgcgacggt tcatatagcc
    30841 ttcaatcagt tgcggcagga tcgggcggat gccgtcatga aaaacagccg ccgagcgatg
    30901 cgccagaagc gatgtcatac ccatcaggca cgccaccacg ataatctgaa tatacagatc
    30961 catagtcgtg ccttttattt cagatggtta atcagcatcg gaatcgcgtg ttcgacatgc
    31021 tcaacggaaa ggccaaacgc cacttttcct tcagcgatca ttttggcgat atgctcgtct
    31081 ttcgctttaa tgcctggttt ggcaatggtg caacttttgt tatagccaat caccgcgatg
    31141 gcaatcgaca atgccgcgcc cgcaccggta ttacacgcac cgatgtagta atccagttgc
    31201 ccggatttca ctttcattgc cgcttccatg tcgttgtgaa tgaaaacttc aaaacagcca
    31261 ggagccgtcg cttcaatagt ttttttaatc tgctcacgct gtaagcctgc aacgccaatc
    31321 tttttcatga gtctgtcctt attggaaaaa ttgagaggga tgtttcacgt aacatcacat
    31381 ccacatcggc ctgactgaat cctgactggc gcaattgcgg aataaaggtg gtcaataaat
    31441 agtcatagcc ataaccacca ttggctttta aatgggagcg gcgcgtaata tccatcgaca
    31501 gcatgacgcg gttcagcaac ccacggtcac gtagcgcgtg gagcatcgca atgcgctttt
    31561 cgtccgggta gtaactgttc ttaccaatgg tgtcgaactg cacatacgcg ccgagatcga
    31621 tcatcttcaa aatgttgtcg aggttgtctt tcagatcgca gtgaccaacg gtgacgcgcg
    31681 aaagatcaac cccgtgggct tgcagcaacg ccagttgctc cagccccatc gtgctgaacg
    31741 acgtatgtgt agagatcggg cgtccagtct ggttatgtgc cagcgcggcg gcaataaata
    31801 ccttctcttc cagcggcgta atcttccctt cgctggagcc gatctccgcg ataatcccgg
    31861 ctttcagttc cgtgccatca ataccctgtt caatttcatc gatcatctcc tgcgccagtt
    31921 cctgcacgct gcgggtcgcc acatgttccg ggaaaaacgc gtcctggtaa taaccggtac
    31981 aggccaccac gttgatcccc gtctcgcgca ttacatcgag cataaattgc gcattgcgcc
    32041 ccatgtaacg gttggtcatc tcaatcacat tacgcacgcc ccgggtcatc aggtcgttca
    32101 tctcctggca aatgaacgca tactgatcaa ggcggcagtc cacgttgttt ttaaagccgg
    32161 aaagatcaat atgcagatgt tcatgggcga aggtgtagcc cgtcggatca aaactcatag
    32221 ggtgtctcct gcaaaccgga gggaggaaag aaaagagcga ccattttgtg gcggtggcgc
    32281 acggaaaaat tcacacacgg tagcccccac atcagaaagc gtggtgcgaa cacctagctg
    32341 agtagcagcc aggccttgct gataaaccag caccggcacg acttcgcggg tatggtggct
    32401 gtgaccgatt gtcgggtcgt taccatgatc agccatgacg atcaggcagt catctggctg
    32461 catcgcctca accaggagag caaggttacg gtcaacgacc tgcaaacgtt cggcataacg
    32521 tgcaacgtct tctgcatgac cagcgaggtc ggtttcctgg atattgatgc aaataaacgc
    32581 cgtcggatgc gtgttaaatt cgtcgagggt gatatccata atccgctagc tatccaccaa
    32641 gttttgccag ctcacgccat aaggattgct gacgatatct gccaccttac ctaccagcac
    32701 ggttggcacg cccgcctcat acagtttttg cggcacctgc actttttcat caacaccgta
    32761 gcccatatgc acgacctgga agccgttgtc ataagcgcca gaacgcggcg cattaatacc
    32821 aataaagcgc ccttctttgc tttctgcggc atcgagaata cgctgactgt tggttaacag
    32881 gccgccaaat gtaatgaccc gaccgacctg tacctggtca cgcacgatac gaccaatttt
    32941 gattgcgtcg tcaaaagaga tcacagagag attggcggta atgttataga cttggcctaa
    33001 atccgcctcg agattatcgc caatcgcaac cgcctgattg acccacagaa attgcagatc
    33061 atcgccacgg cgctccacct gccagccagc ggaaactaat gcctgctcaa cacggtcaat
    33121 cacatcgcga aaaggcatcc gcagcggcgg taacgggcgc gtgcctaaaa tttcctgatg
    33181 ccccataaag gtatcgccac cttcatgttg cagctctgcc acgccccagg ttgcggaatc
    33241 tgacggctgc atatcgcctg gcgcataacc caatgcgttg attagcccca gcttctccag
    33301 cgttggtagc tgcaaatgcg gcaactggct caggatgtga ccacaggtat tcgccccggc
    33361 atcttgcggg cgcaccagcg tgacatcttt cattgcccct acgccaaagc tatcaatcac
    33421 taacaccaca aatcgcgcca tttacgcctc cagagggttg ccgaggctgt cataacgacc
    33481 aactatttct ggttcgccgc gctgaatgcc ggacaccagc accacatcgc tacgggtgac
    33541 aaaaatctac gtgcgaaaac agagcaccac tgcactgctc accggatact cgcctgccag
    33601 cggcagggtg tagtcgatac tgctgtcatc cacagttttg agattggttt cagtaatctt
    33661 ttgattttct ggcgtaaaca ccagcgcatg ttgcgcatga ccacgacggt agtaaccgcc
    33721 gccgtagcag tagctgtcgc cacggaaatg atgggagatt tcacttaacc agagcatcgc
    33781 gatacgttca ggctgatcgc cctgctggtt tgccggaata gtgcccgtca gcgcatgacc
    33841 gggttcggca tgagtcacac cgtattccgc cagcaatggc agcgaagtgc agctggtcgc
    33901 tgaaggcgcg ttcagttgct caatcgcaat accagatttc gccagttgat cccgtgcttg
    33961 taccagcgtg tgaagattcg gtgtcggcaa aactttcccg gcagcctcat cccaaagcag
    34021 gcaagggaaa tgggttagtc ccgccaaatg cagccccggc agtttcttaa tttcagcaac
    34081 cacctcgtgc agcgaatgct gtacaaaacc gctctcctgc cccggataaa gaaaatcatc
    34141 gtcgctataa actttgagca gcacagactg gattcgcccg gccttcaccg ccgccgcaga
    34201 aacttcccgc gctttgtcga gagtaaacac ggtgatgacg tcggtgccct gttcaacggc
    34261 gtcagcaacc tgatgacaag ggatttgtac cagatgcccc tgatgcgcca ccggcaaacc
    34321 agcgcggcgc atgactcgcg cctctttgta atccaccgcc acaatgccgc tgtagcctaa
    34381 tgccagcaat ttttccgcca gccatgggtt acgaccgaat tgtttggtca tcagatacag
    34441 ttcaatgccg taaagccgcg ccgtctcaat cagccgctta ccgttttcca gtatctgatc
    34501 cacgtcgatc acccggctgt ccggggcgat cttgccctgc tgccacaggc ttagtgcggc
    34561 ggaaatcagc gccgggttct ggcgtttcaa tgcttctaca aacatcttgt tgcctcgttt
    34621 ctgttccttg aattaaatat tcattttttt gaatatttag gttgtgcgac gtggatttgt
    34681 cgggagcttc aaacctcttc gttagcagcc atccataacc cataaaggtt ggccagcaaa
    34741 tagccttctt cacacgggtt aacttccagt gcgaattcct tcaacaacac ctgatgcaat
    34801 tgcaaaacgg cttgccagtg gctggattgc gccagctctg cctgcaactc gttatccagc
    34861 ggctctattt cttcaccacg gcgactgcgc atcagtgcac tcgccatatg tgtcatcgcc
    34921 atcgttcctt gctcactgcg caccggcaga tggcactctt tttccagtac gttgacgacc
    34981 tgcatcatgc ctttgcagac gtccttatca ataacgccta cctcgcaaag caggttgagt
    35041 ctggtttcca tatcagatgc ctttcgttta ataactgggt tcctgttccc cactcaccac
    35101 ccgttgttga tgggcaagca gggcgtgttt atctacaacg gcacgcagca attgttgcat
    35161 tgggtaatca tcgactcgcg tcaggaccac ggcttcggtg gcctgtaaaa atcgcggatc
    35221 gtctgtgagc ggcgtcgcct ctaatcccag catggtcagt tcgttttccg ccaccacgtt
    35281 ccagatcacc gcatcgacat cgcctttaac aatgcgttgt aaactctcgt gataagagag
    35341 atcgactcgt tccacatcac taccgccaaa aaaaacatcg gtcatgattt tctgatccgc
    35401 cgaacggtta tccagcccca cgcgcttcac gtttgcggac tcgcctttac ggcaaatcaa
    35461 ctggtgctcg ccaacgtagg tgtgcggccc caactccagc gcgaggcata accctttttg
    35521 cgtgagataa ctttccgccg ccagtcggga aaccaccgcc atgtcataca cgccgttaag
    35581 taaacactcc acgcgaatat ccgcgccgcg catatgcgca tagtaaaaag gaatgccatc
    35641 aaactgagct ttcagcccgc tcgctaaacc ttcgtacaag cgggtatagg gcaaaggcat
    35701 cgcacatacc acgttgttga tatccacatg actcagcaat gctttgttat ccatctcgac
    35761 cagataactg ccattgcgcc cacggcgttc aatccgtatc gctccgcttg attccagcgt
    35821 tttcaacgcg gcctgcgtca ggccaacgga tgaacggcat tcagttgcca gctcatctat
    35881 ggttttcaac ctattaccgc atttttcacc caacaaataa cgggccagcg tcgtgataac
    35941 gacgccttct tttttgataa acgttcgacg cataatatat tttcaataaa atgaatgttt
    36001 atatcttcat taaaatgaag ataagtggca actgtgagat gtggaaacgg cgaggcgctt
    36061 cacatttttt cggattattg caaatgagga taaaaaaacc gggtttcccc ggtttcagag
    36121 tgatgacgaa gtgatttatt cgacaatgcg agcaaagggt aattcccact ggcgcttgcc
    36181 tgctcccctc accctctccc caaaggggcg aggggaccgt ccgagcgttt tgatattacg
    36241 gcttcgccac aaaaccaatc gcttcgtaca ccgcttttag cgtacgagaa gcgtgcgcgc
    36301 tggctttttc cgcgccatct ttcatcacct gttgcaggaa ggcttcatcg ttgcggaaac
    36361 ggtgatagcg ttcctgcaat tcagtcagca taccggaaac ggcatcagcc acttcacctt
    36421 tcagatgacc atacatcttg ccttcgaact gtttttccag ttccgggatg ctctggcccg
    36481 ttaccgcaga aaggatatcc agcaggttgg aaacgcccgc tttgttctgc acatcgtagc
    36541 gaactaccgg cggctcgtcg gaatcagtga ccgcgcgttt gattttcttc actaccgatt
    36601 tcggatcttc cagcaggccg ataacgttat tgcggttatc gtcagacttg gacatcttct
    36661 tggtcggctc cagcagcgac attacgcgcg cgccagattt cggaataaac ggctccggca
    36721 ccttaaagat atcgccatac agcgcgttga aacgctgagc gatatcgcgg ctcagttcga
    36781 ggtgctgttt ctggtcttca cccaccggta ccagattagt ttgatacagc aggatgtccg
    36841 cagccatcag caccggatag tcaaacagac cagcgttgat gttctcggca taacgcgcag
    36901 atttatcttt aaactgcgtc atgcggctca gttcgccgaa ataggtatag cagttcagtg
    36961 cccagcctaa ctgcgcatgt tccggtacgt gggactgaac aaaaatggtg cttttctcag
    37021 gatcgatacc acaagccaga tacaaggcca gcgtatccag cgtcgcttta cgcagcttct
    37081 gtgcatcctg gcgcacggtg atcgcgtgtt ggtcaacgat acagtaaatg caatggtagt
    37141 catcctgcat gtttacccac tgacgcagcg cacccatgta gttaccaatg gtcaattcac
    37201 ctgagggctg tgcgccacta aaaacgatgg gcttagtcat ttttcgattc ctgattttcg
    37261 ctatgcggaa gccctaatgc gggcagaagg tcatttatag actgataaat tacatcaggc
    37321 tggctgagat cgatagcctc gccgtagtta tatccgtagg ttaagccaac ggatgggcaa
    37381 cctgccgctt ttgccgcctg aatatcattg cgtgagtcgc cgacaaacag catctgttgt
    37441 ggggcaattc ccatccgctc agccaccagt aacagcgggt ccggatgagg ttttttgttt
    37501 tccacatcat cgccgccgat aaccacgcta aagtatttgg caatatctaa ggcttcgagc
    37561 agcggcgcga cggatggcgt cggtttgttg gtgaccaggc ctagcggcag gcctttagcc
    37621 tgcaacgcgc ccaacgtatc ggcaacgtgc gggaacaaaa acgtcccctc ttcggcaacc
    37681 tcgccatagt agcgatcgaa cagtttacgc agaatacgta cctgttcttc tgccggaatg
    37741 tcgtcatcaa cgggcggttt gcccattgtt ttacgcagag tcgcacgttc ctgacgcgcc
    37801 caggtcaatg cgcgctccat cagaacatct gcgccgttac caatccaggt aataacgcgt
    37861 tcttcacctg cgacgggcaa ctccagcgca tacagcgcca tatctaccgc agcagcaaga
    37921 ccaggagcac tgtcgaccaa cgtaccatca agatcaaaag cgacgccgcg aatatcttca
    37981 aacttattca tgacttacct ttgccagttc actgcgcatt tcatcaatga cttttttgta
    38041 gtctggctgg tcgaagattg ccgaaccggc gacgaacata tccgcgcccg ccgcagcgat
    38101 ttcgccaatg ttgttcacct tcacgccacc gtccacttcc agacgaatgt caaagccaga
    38161 ctcgtcgata cgacgacgta cttcgcgcag tttatccagt gtttgaggaa tgaaagactg
    38221 accgccgaaa ccagggttga cggacatcag caggatcaca tccagcttat ccagcacgta
    38281 atccagatag ctcagcggtg tcgccgggtt aaataccaga cccgctttac agccattttc
    38341 tttaatcagt tgcagcgtgc ggtcaacatg ctcggaggct tctggatgaa aggtaatgat
    38401 gctggcacca gcggcagcga aatcaggcac aatgcgatcg acgggtttca ccatcagatg
    38461 tacgtcgata ggggcggtaa tgccgtagtt acgcaaggat ttcagcacca ttggtccaat
    38521 cgtcagattg ggaacatagt ggttatccat gacgtcaaaa tgcacgacat cagcgccagc
    38581 tgccagggct tttgcggtat cttcacccag gcgggcaaaa tcagccgaca gaattgaggg
    38641 ggcaatcaaa tactgtttca tccgcttctc cttgagaatt attttttcgc gggtgaaacg
    38701 actcctggtt tgtacaaagc cagcagttcg tccacctttt tacgtgtgcc gccgttgctg
    38761 cttatactgc gtcgaacttt gacgacatgc aattttgcgc gctgatacca ctcacgcgtt
    38821 aacatcgtat cgtgattgga gatcagcact ggaatatggc gctcaacaag accttcggcg
    38881 atctccgcca gatgcgcttg ttgttcaagc gtaaaactgt ttgtgtgata cgccgtaaag
    38941 ttggcggtcg cagacagcgg tgcataaggc ggatcgcaat agacgacgga tgcatcatct
    39001 gcgcgcgcca tgctatcggc gtaagactca caatagaaaa aggcattctg cgctttttca
    39061 gcgaagtgat acaactctgc ttccgggaaa taggtttttt tgtagcggcc aaacggcacg
    39121 ttaaactcac cgcgcagatt gtaacgacac aggccgttgt aaccgtagcg gttcaaatat
    39181 aaaaacagta ccgcccgacg gaacggatcc tggcttttgt tgaactcttc gcggaactga
    39241 tagtaaacct cggcgcaatt tgtttcggga acaaacagct cgcgtgcggc ctgtacgtac
    39301 tcatcagtac gcatcttcac aatgttatag agactgatca ggtcgctatt gatatcggca
    39361 aggatataac gagaaaagtc ggtgttgaga aacaccgacc cggcacctac aaaaggctca
    39421 accagacatt cgcccttggg caaatgccgt ttaatatcat caagcagggg atacttgccc
    39481 cctgcccact tcaaaaaagc gcgatttttc ttcatgctga ctaactaatt acaccttctc
    39541 cggctgtgga gaaagctccg acagcatcca gcgcttcagg caactcccgc aacgataaac
    39601 cattgcggga gataaccttg attacttcag atcggcctgt acctgacgca gcggtttcgc
    39661 ccacgggttt ttggcctgaa catctgctgg caatgtagat accgcttttt tcgcctcttc
    39721 tttcgaagcg tacacgccag aaaccaggac ataccacggc tgaccattac gcgtcgtttc
    39781 atagacaacg tagtttttca gattctcttt cttcgcccaa ccgttcaggt tgtcgtagtt
    39841 agaggaactg ctcagctgca gagtgtaatg gctggacgat gccgatttca acgaaccaac
    39901 attacctgcg gtcttccctc cagcggctgg tgttgccgtg gtttgcgccg gggatgccgt
    39961 ctgtactgga gccgtagtcg ccgtctcttt tggtgctggc gtagaagtcg cagccggtgc
    40021 cttcgtgctc gccacagggg cagctggttc agtacgcttc ggcgtctgtg ctaccggctt
    40081 cggctccgtt ttcacggttg cttgcggttt tttcggttca atcaccgcct gctgacgagc
    40141 tgggcgcgta gtggccggac gttcagctgt ttgcgttttc tccgtgtcac gcgatgcatt
    40201 gccattgcga acaggcgcga cagtcgcggg ttcagtcggc aacgtggaat tgaccgccac
    40261 attgttcaac tgttgctgat tttgtggctg ggtcagcgca ttgttcaggt caccctgcac
    40321 ttcaacacgt tgttgaccat ccgttgccgc cggggtttgc ccttgagtcg gcgtagaaga
    40381 gatcggcggc agagaaacat cctgctgagt attttccgca gacgtggttc ccggcgctgg
    40441 ctgcacgcca ttcgcctgat cggtcgcatt gcctgcaaga tcaatactct tctcgccaga
    40501 cgcggtttga tcgctggaag tggtcgaggg ggcttttagc gcagaaccga taccgatgat
    40561 caacagcagt agaaccagaa tgccgacgcc catcatcata tactgacgag aagcgggttt
    40621 actggctgct tttttgcgct tacgcggacg acgctctacg cgctcttcat ccacggtttc
    40681 atcttcggat tcgtcaattt cttcttcgat ttccggttcc tcattgcgct ctttttgcgc
    40741 acgagtcgga cggcgatcgt cagtgtcatc aagttcaata tcatcaaaat tgatctgcgg
    40801 ttcgccacgt tcagtacgct cagaagattg acgagaacga ccagtacgac gatcgctggg
    40861 atcgggtttc agctcgtctt ctggtttgaa ttcatccatt taacacccca ctaaaaggtt
    40921 aatgcttacc acgttgcaat taacctgaag ctaatagacc gcttgataag cggcctgacc
    40981 tttcttgttg ttacgctgat tgacaatcgg caatggcgtt aagaacaagc tcgtgcgaaa
    41041 cgccgctgcg aacttcactc ttaccaattg ccaacggaag aattaagcgc atctctcccg
    41101 caaggacttt cttgtcacgc agcatatgcg gtaaatacgc ctgcgcggac atttcgcgcg
    41161 gcccattgac cggtaaccca gcccgcttga gcagagttat aatacgctgc gtttcgacag
    41221 aactaaactg cccgagacgt tccgacgtcc gcgccgccat caccataccc gcagcgaccg
    41281 cttcaccatg taaccaattg ccatacccca tttcagcttc aatggcatga ccaaaggtgt
    41341 gtcccagatt cagtaaagca cgtaacccgg tttcgcgctc gtcggcggcg acaacttctg
    41401 ccttcagttc acaacaacgg cgaatacagt acgccattgc cggaccgtcc agacgcaaca
    41461 acgcatccag attctcttcc agccagttga aaaacgcacc gtcaagaata atgccgtatt
    41521 tgatgacttc tgccagcccc gatgctaact cacgcggggg aagcgttttc agacagtcga
    41581 gatccaccac cactgaagca ggttggtaga acgcgccaat catgttttta ccgaggggat
    41641 ggttgaccgc agttttgccg ccaacggagg aatcgacctg cgacagtaac gtcgtcggga
    41701 cttgaatgaa acggacaccg cgctgataac tcgccgccgc gaagccggtc agatcgccca
    41761 ctacgccgcc gccaagcgcc accagcgtag tatcgcgacc atgcggcttt tgtaacaacg
    41821 ccgtaaagac ggtatcgagt accgccaggc ttttatactg ctcgccgtca gggaggataa
    41881 cgctatcgac gttaacaccc gcctgttcaa gtacgccgcg gaccttatcg agatacaaag
    41941 gagccagggt ttcgttggtg accaacatga cctgctcgcc cgatttcagc ggtaagaatg
    42001 aagctggttc attaaacaaa ccagatgcga tggtaattgg gtaactacgt tctccgagag
    42061 taacgacaat cctctccata acgcgacatc caccttaatt actgtacccg cagacgagtg
    42121 tatataaagc cagaattagt tgctttccag catgtgaata atctggtttg caaccacttt
    42181 agcgctttga tcatcagtac gaatggtcac gtcggcaatc tcttcataca gcggattgcg
    42241 ttcattggcc aacgcttcca gaacttcacg tggcggtgtt tcaacatgca gcaacgggcg
    42301 ttttttatca cgctgcgtgc gtgcaagttg cttttcgatg gtcgtttcaa gataaacgac
    42361 aacgccacga gcggaaagac ggttacgcgt ttcacgggat ttcacagagc cgccgccagt
    42421 agccagcaca ataccctgtt tctcggtcaa ctcattgatg accttttctt cgcgatcgcg
    42481 gaagccttct tcgccttcta aatcgaaaac ccagcccaca tcagctccgg ttcgtttctc
    42541 aatctcttga tcggaatcgt aaaattccat attgagttgt tgagctaact ggcgcccaat
    42601 agtgcttttt ccggcaccca taggcccaac cagaaagata ttgcgtttct ctgccatttt
    42661 ttcggtacta ctaagactat tcgttaatga taaacccgct tcgctcagag agcgccgcag
    42721 gacatgaact gaaacctcat aagatattgc gagagtcaga ctgaaaatta tctcaatact
    42781 ccagcgggtt tggcaactga ataaatcacc catccccctg catatctggt cgctgcaagc
    42841 gcgctgcctt gctaccaccg ctctggcgat aaatcaccgg gtaagattag cgtaaaaaag
    42901 acagcaaaat gccgcctgaa tgataaatca tcatcatgga acgcaggcag cgaagagcac
    42961 caactctcaa atcggtactc cttgtatgct aaatacctgc gcgcgtcaaa tagatgaaac
    43021 acgttcagcg taaaaacatt accgctttta cggctgttta ctcactggaa accagtcgtg
    43081 gcgtgataaa caccactaac tcgcgtcgtt catcttcttt tccgtcatga cgaaataatt
    43141 gcccgaacca gggaatgtcg ccaagcaacg gtacgctatc ctgacccgat ttatttttac
    43201 gggtaaaaat gccgcccagc accaacgttt ctccgctttt gacctcgacc tgcgtttcga
    43261 tctcctgctt atcaatcgcc agcacttcgc catcagcctg ctgtagcacc tgccccggaa
    43321 cattctggct gatgtgtaat ttcagccgga tgcgaccttt ttgtaacacc gtgggcgtga
    43381 cctccatccc caggacggcc tctttaaatt ccaccgacgt cgcgccactt tccccgctgg
    43441 aaacctgata tggaatttcg ctcccctgtt taatgctggc aggctgaaga tgtgaggcca
    43501 gcagacgcgg actggcgata atatccagtt gctgtttttg ttcgagcgcg gaaagctcaa
    43561 gatccagcaa gcgtccgttg atgcgcccaa tgttaaaacc gacatgcgtt gtcgccgtcg
    43621 ctacggagag gtcgctacca agcgtggtga cttgcccaac gccaccagcg tgttgcgcat
    43681 cggccagcgt ccatttcacg cctaactcac gcaaactttt ttcattaatg gtgacaatat
    43741 gcgccgacag ctcaacctgc ccgaccggca gatccatttg cgctacccac tgttcaagcg
    43801 cgcttaacgc cgttttgtta tctcgtagca aaaggcgatt ggtgcgttta tcgacggtca
    43861 tactcccttt ggcactcagt agcttctccc ccgctttcgc cagttctccc gcgtcggcgt
    43921 attgcagcgt tatactgcga ttttccagcg gcagatttgc ctgcgcccgc gcctgctccg
    43981 cctcctggcg ggcgatattg ttattctgcc aggcaatgga atgcactgag agaatgttgc
    44041 cttcctgccg cgttatcagt ccggcgcttt tcactacagt ttgtagtgcc tgcttccagg
    44101 gaacatctgt tagatgtaac gacaccgtac cgctgacgtc tggcgacacg accaggttca
    44161 acttctcctg ttcagccagc gcctgcaaca cctgagctac cggaacgtca tccaccatca
    44221 gcgtcacttt ttgcggcttt gccgcctgta cgccgggtat cagcatcaac agtagtgcgg
    44281 ctatccattg cttcatttgt atctccttgc cgttgccaca accattgtgg cggttcgcag
    44341 tttgttccgg ttcccagcgt tagtgcgtct ggcgtcagtt gtaaaattgt ccagccgttt
    44401 tccagcacat cgttttgctg cacccgtcgc catttctttt gcccgtcttt tattacaccg
    44461 atgatgcgct cgcctcgccc tactatcccc tgatagcgcc actggctaag ttcgctaatc
    44521 cggcatagat cttccggcgg tttaaaaggg tcacgcagac cggttaaaag gcacaatgca
    44581 atacctgcca acaaccagcg tttacccctc atgcggcgtc tccagttgta gcgtgaacaa
    44641 aagatcatca ccttccacgc ttaacgaaaa acggctcacg ctgacgttgc gctctgccag
    44701 ccgtgtaaat gccgacggca ctgcttccca cagcgttttc aacgccaact cacctccctg
    44761 cgcggatgga tgccaggaaa ccagttgcgc gccgggcaac tgaaaatcca gtggcgaaaa
    44821 gggcagcgtt ttttcttcgc tgaagggagt ggtgtcaacc aggcgataca gtgtggccca
    44881 ctgctggtga tgacttgccc gtagtcgaat taatgcgtcg cgctcttcat ggtgtgtcga
    44941 tgacagaaaa atgagcgtaa ctaacatcag caaccagaat gcccagcaaa actggcggag
    45001 gcggggtgat gtggcgaacc accagtcaaa gaacatgttc atcgctaacc ttccttgtta
    45061 actgatactc aaattgccag cgtccctgcg catcctgctg cgtggctccc cgctgattga
    45121 gatgaaaaga cgcatcctgg cggagtgacg tttctagtgc gtttaacgcg gtaatgcttg
    45181 ttgtcagccc cttgatctcc agcgttccct gctgccagct tatcgttgtc agccaggcgt
    45241 gctcgggtaa aagcgccgcc agtgcttcca gcgcagattg ccagtcgcgg gtaaattgtc
    45301 gctggcgctg ccgttgcgaa cgctgttcgc gtaactgctg ttgctccagc aaacgtggct
    45361 tcgttatctg taagctgcgg gcgagttgtt gttccgcctg aagcaaaact gcgtctatgc
    45421 gcgcttcggc gctgcctgtc agacgcagta ttagcgttat cccgacggcc agcagcagag
    45481 gcgcaacgaa catcagcaac cagaaacgca gaaaagcggt ccggcgttgc tgtcgccagg
    45541 gcaaaaaatt aattggcggg ttcatcagta cgccttccca agcgccagcc ccagcgcgat
    45601 ggcaaagtct ccaccaggcg gcggtagcgg cggctgacga acagaaacgg cctcccaggg
    45661 gtcaaatccg ccttcgccac atatcgcgac gctgtcggga tcaacggata acgctgccgc
    45721 cagctccttc gcgctagtca tccccaccgc cagtttgcgc ccccagctat agcgcgtcgc
    45781 ccacagccac tgttcgttat cacgccaggc cagacattgc tgatgagaag gtaaaaaagg
    45841 caggaatcgc tgtaatgcac tggcatccgg ggtgatcgca ctaacatgaa cacgcaacct
    45901 ttctgccagc gtaagcagcg ttgccagctc tttgctttac gcggcagtca cgttataagc
    45961 ggggctgagt gagtcttcgc tgtaatcgaa gcgcagggag tccggatcca tatccagctc
    46021 gcgggccatc gtccctgaca gccaggccgt ttgctcccgc tcaccaaggg acatcgacgg
    46081 gcgcggaaat gaccgctgta atgtgcgact ggcgggaaac gccaacataa tgtgatgacg
    46141 ctgcggcagt tcgcgactcc acggtaacaa cgttttagcc agctgctgca catcaacaat
    46201 ccgcccatct ttgataatgt cgttctccag cggcaaccgc caccagcgtt gcaaaaagca
    46261 ttcttttgcg ccccgcacga tcgcaaccgc taccgcttct tgctgttgta aatgcaaacc
    46321 aatttgccag atcttaaatg ccattgtgat gatctcctta tcacccgtca ctctgacggg
    46381 tatatcaatg cgtctggctt gcctttatac taccgcgcgt ttgtttataa actgcccaaa
    46441 tgaaactaaa tgggaaattt ccagtgaagt tcgtaaagta ttttttgatc cttgcagtct
    46501 gttgcattct gctgggagca ggctcgattt atggcctata ccgctacatc gagccacaac
    46561 tgccggatgt ggcgacatta aaagatgttc gcctgcaaat tccgatgcag atttacagcg
    46621 ccgatggcga gctgattgct caatacggtg agaaacgtcg tattccggtt acgttggatc
    46681 aaatcccgcc ggagatggtg aaagccttta tcgcgacgga agacagccgc ttctacgagc
    46741 atcacggcgt tgacccggtg gggatcttcc gtgcggcaag tgtggcgctg ttctccggcc
    46801 acgcgtcaca aggggcgagt accattaccc agcaactggc gagaaacttc ttcctcagtc
    46861 cagaacgcac gctgatgcgt aagattaagg aagtcttcct cgcgattcgc attgaacagt
    46921 tgctgacgaa agacgagatc ctcgagcttt atctgaacaa gatttacctc ggttaccgcg
    46981 cctatggtgt cggtgctgcg gcacaagtct atttcggtaa aacggtcgac caactgacgc
    47041 tgaacgaaat ggctgtgata gccgggctgc cgaaagcacc ttccaccttt aatccgctct
    47101 actcaatgga tcgtgccgtc gcgcggcgta acgtcgtact gtcgcggatg ctggatgaag
    47161 ggtatatcac ccaacaacag ttcgatcaga cacgcactga ggcgattaac gctaactatc
    47221 acgcgccgga gattgctttc tctgcgccgt acctgagcga aatggtgcgc caggagatgt
    47281 ataaccgtta tggcgaaagt gcctatgaag acggttatcg catttacacc accatcaccc
    47341 gcaaagtgca gcaggccgca cagcaggcgg tacgtaataa cgtgctggac tacgacatgc
    47401 gccacggcta tcgcggcccg gcaaatgtgc tgtggaaagt gggcgagtcg gcgtgggata
    47461 acaacaagat taccgatacg ctgaaggcgc tgccaaccta tggtccgctg ctgcctgccg
    47521 cagtcaccag cgccaatcct cagcaagcga cggcgatgct ggcggacggg tcgaccgtcg
    47581 cattgagtat ggaaggcgtt cgctgggcgc gtccttaccg ttcggatact cagcaaggac
    47641 cgacgccgcg taaagtgacc gatgttctgc aaacgggtca gcaaatctgg gttcgtcagg
    47701 ttggcgatgc atggtggctg gcacaagtgc cggaagtgaa ctcggcgctg gtgtcgatca
    47761 atccgcaaaa cggtgccgtt atggcgctgg tcggtggctt tgatttcaat cagagcaagt
    47821 ttaaccgcgc cacccaggca ctgcgtcagg tgggttccaa catcaaaccg ttcctctaca
    47881 ccgcggcgat ggataaaggt ctgacgctgg caagtatgtt gaacgatgtg ccaatttctc
    47941 gctgggacgc aggtgccggt tctgactggc agccgaaaaa ctcgccgcca caatatgctg
    48001 gtccaattcg cttacgtcag gggctgggtc agtcgaaaaa cgtggtgatg gtacgcgcaa
    48061 tgcgggcgat gggcgtcgac tacgctgcag aatatctgca acgcttcggc ttcccggcgc
    48121 aaaacattgt ccacaccgaa tcgctggcgc tgggttcagc gtccttcacc ccaatgcagg
    48181 tggcgcgcgg ctacgcggtc atggcgaacg gcggcttcct ggtggacccg tggtttatca
    48241 gcaaaattga aaacgatcag ggcggcgtga ttttcgaagc gaaaccgaaa gtagcctgcc
    48301 cggaatgcga tattccagtg atttacggtg atacgcagaa atcgaacgtg ctggaaaata
    48361 acgatgttga agatgtcgct atctcccgcg agcagcagaa tgtttctgta ccaatgccgc
    48421 agctggagca ggcaaatcag gcgttagtgg cgaagactgg cgcgcaggag tacgcgccgc
    48481 acgtcatcaa cactccgctg gcattcctga ttaagagtgc tttgaacacc aatatctttg
    48541 gtgagccagg ctggcagggt actggctggc gtgcaggtcg tgatttgcag cgtcgcgata
    48601 tcggcgggaa aaccggtacc actaacagtt cgaaagatgc gtggttctcg ggttacggtc
    48661 cgggtgttgt gacctcggtc tggattggct ttgatgatca ccgtcgtaat ctcggtcata
    48721 caacggcttc cggagcgatt aaagatcaga tctcaggtta cgaaggcggt gccaagagtg
    48781 cccagcctgc atgggacgct tatatgaaag ccgttcttga aggtgtgccg gagcagccgc
    48841 tgacgccgcc gccgggtatt gtgacggtga atatcgatcg cagcaccggg cagttagcta
    48901 atggtggcaa cagccgcgaa gagtatttca tcgaaggtac gcagccgaca caacaagcgg
    48961 tgcacgaggt gggaacgacc attatcgata atggtgaggc acaggaattg ttctgattaa
    49021 aaaggcgctt cggcgccttt tcagtttgct gacaaagtgc atttgtttat gccgggtgcg
    49081 ggtgaaagtg ttatcaggct aacaaaatcg tgaaaactca ataaattgca ggaactccgt
    49141 atgcctgata agcgttgtgc atcaggcaaa cttcacgcat ttacactcgc ccctgccctt
    49201 tcaaccattc gcgcacgagg aacagcgcgc tgacattacg cgcttcgttg aagtcagggt
    49261 cttccagcaa atccatcata tgcgccagcg gccagcgcac ctgtgatagc ggctctggct
    49321 catcgccttc cagcgattcc gggtagagat cttgcgctac cacgatattc attttgctgg
    49381 aaaagtaaga cggtgccatg ctgagcttct tcaaaaaagt cagatcgttc gcaccaaatc
    49441 caacctcttc ttttagctcg cggttagcgg cttcgtagac gctttcaccc ggatcaatta
    49501 atcctttcga aaaacctaat tcgtaggatt cagttcccac tgcgtattcg cggatcagga
    49561 tcaggtgatc gtccacaatc ggcacaatca tcactgcttc ccggttggtt ggacgcattc
    49621 gttcataaac acgccgcacg ccattgctga actctagatc cacgctctcg acggtaaaca
    49681 gtcgggaacg ggctacagtt tcaacattca gaatggtggg tttttgtaat gatttgctca
    49741 tcgtgggatc tatgctgtga aatcagcggt tattgtgcga tatcggacac gctttcggca
    49801 atgtgaattg catgttattt acatttatgt aacttaataa ataatcgtcc tcaaatcaaa
    49861 ttaaaagtca ataggttgaa ataactccag gaatttgctg atattccgcc ttcagagggt
    49921 ttgctatgat cagcggttac tgtgatgtgc ttaatgatgc tcaagttaaa ctccacgctt
    49981 gccgatagcc aaccgcagaa tcatgtattg tgtccggtgc gactgaccac gcctgacaga
    50041 ctaagtaaga tggggaaagc atgagcacca ttgtgatttt tttagctgct ttgctggcct
    50101 gctcactact tgcgggatgg ctgataaaag tgcgatccag acggcgtcag ctgccctgga
    50161 ccaacgcctt cgcggatgcg caaacgcgta aactcacacc tgaagaacgt agcgccgttg
    50221 aaaattatct tgagagcctg acgcaggtat tacaggtgcc tggcccaacg ggagctagcg
    50281 cggcaccgat ctctctggcg ctgaatgccg aaagcaacaa cgtcatgatg ctgacacacg
    50341 ctatcacacg ttacggcatc tctaccgacg atccgaataa atggcgttac tacctcgatt
    50401 cggtagaagt ccacctgccc cccttctggg aacagtacat caacgatgag aataccgttg
    50461 aactgattca taccgattcg ctgccgttgg ttatttcact caacggtcat acgctgcagg
    50521 agtacatgca ggaaacgcgc ggctatgcct tgcaacctgt tccgtccacg caggcgtcga
    50581 ttcgcgggga agagagtgag caaatcgagc tactcaatat tcgcaaagaa acgcatgaag
    50641 aatatgcgct gagtcgtccg cgcgggctgc gtgaagcgtt gctgatcgtc gcctccttcc
    50701 tgatgttctt tttctgcctg attaccccgg atgtatttgt tccgtggctg gcaggcggcg
    50761 cattactgct gctgggcgca ggtctgtggg ggctattcgc gcccccggca aaatcctccc
    50821 tgcgagaaat tcattgtctg cgcggtacac cccgtcgttg gggattgttt ggcgaaaacg
    50881 atcaggaaca gatcaacaat atttcactcg gtattatcga cctggtctat cccgcacact
    50941 ggcagccata cattgctcag gatctcggtc aacaaaccga tattgatatc tatctcgacc
    51001 gccacgtagt gcgtcagggg cgatatcttt cgctgcatga tgaagtaaaa aactttccgt
    51061 tacagcactg gctgcgcagt acgattatcg ctgcgggctc gctgctggtg ctgtttatgc
    51121 tgttattctg gatcccgctg gatatgccgc tgaaattcac tctctcatgg atgaaaggcg
    51181 cgcagaccat tgaagccacc agcgtaaaac aactggctga cgctggcgtg cgggtaggcg
    51241 atacattgcg tattagcggt acgggaatgt gtaatattcg cacttccgga acctggagcg
    51301 cgaaaaccaa ttcacctttt ttaccgtttg actgctcgca gatcatctgg aatgacgccc
    51361 gctcattacc attaccagaa tctgaactgg tcaacaaagc gacggcattg actgaagcag
    51421 ttaatcgcca gctgcaccct aaaccggaag atgaatctcg cgtcagtgcc tcattacgtt
    51481 cagcgattca aaaatccggc atggtattgc ttgatgattt tggcgacatt gtactgaaga
    51541 cagcggattt atgttctgcc aaagatgact gtgtgcgact gaaaaatgcg ctggtcaatc
    51601 tcggcaacag taaagactgg gacgcgctgg taaaacgcgc caacgccggg aagctcgatg
    51661 gcgtgaatgt gttattacgc ccggtgagtg cggaatcgct ggataacctg gtggcaacct
    51721 ccaccgcgcc gtttatcacg catgaaacgg cgcgagcggc acaatcacta aacagtccgg
    51781 cccccggcgg attcctgatt gtcagcgacg aaggcagcga ttttgttgat cagccctggc
    51841 cttcggcatc actttacgac tacccgccgc aagaacagtg gaacgctttc cagaaactgg
    51901 cacaaatgct gatgcatacg ccgtttaacg ccgaaggtat cgtcacaaaa atcttcactg
    51961 acgccaatgg tacgcagcat attggccttc atccgatccc ggatcgttcc ggcctgtggc
    52021 gctatctcag caccacattg ctgctactga cgatgctggg tagcgccatt tacaatggcg
    52081 tacaggcctg gcgtcgttac cagcgtcatc gcactcgcat gatggagatt caggcctatt
    52141 atgaaagctg cctgaacccg caactgatca ccccttcaga aagccttatc gaataacacg
    52201 tttgcgcggc aggttatgct accctgtcgc gcaaattgct tcactctgga gatttccctc
    52261 atgcatatca acattgcctg gcaggacgta gataccgttc tgctggatat ggacggcacg
    52321 ttgctcgacc tcaccttcga taactatttc tggcaaaagc tggtgcctga aacatggggc
    52381 gcgaaaaacg gggttacgcc acaggaagcg atggaatata tgcgccagca atatcacgac
    52441 gtacagcata cgctaaactg gtactgtctt gattactgga gtgagcaact gggtctggat
    52501 atctgtgcga tgaccaccga gatgggaccg cgcgccgtac tgcgtgaaga taccattccg
    52561 tttcttgagg cactgaaagc cagcggtaag cagcgaattt tgctcaccaa tgctcatccg
    52621 cacaacctgg cggtaaaact tgagcatacg ggtctggacg cacaccttga tttattactt
    52681 tccacccaca catttggtta tccgaaagag gatcagcggt tatggcatgc ggtggccgaa
    52741 gctacgggtc tgaaagctga aagaacgctg tttattgatg acagcgaagc gattctcgat
    52801 gctgccgcac aatttggaat tcgatactgt ctcggcgtca caaaccccga ttccgggatt
    52861 gccgaaaaac agtatgagcg ccatccgtca ctgaatgact accgccgcct gatcccctcg
    52921 ctaatgtgaa ggagacgcca tgaaagagaa acctgtagct gaggttcgac tggataaatg
    52981 gctatgggct gcccgttttt ataaaacccg cgcgctggcc cgtgaaatga ttgaaggcgg
    53041 taaggtgcat tacaacgggc agcgcagcaa gccgagcaaa atcgtcgagc tgaatgccac
    53101 gctcactctg cgccagggaa atgacgaacg cacggtgatt gtaaaggcga ttactgaaca
    53161 gcgtcgcccc gccagcgagg cagccttgct gtatgaagag actgcggaaa gtgtagagaa
    53221 acgcgaaaaa atggcgctgg cacgtaaact taatgcctta accatgccgc acccggaccg
    53281 acgcccggac aaaaaagagc gccgcgacct gttacgattt aaacacggcg acagtgaata
    53341 actgtcacct gcaagagaga tgattatgcc gcaacatgac caattacatc gctatctgtt
    53401 tgaaaacttt gccgttcgcg gcgaactggt aaccgtttcg gaaaccctgc aacagatcct
    53461 tgagaatcac gattatccgc agcccgttaa aaacgtgctg gcagaactgc tggttgcgac
    53521 cagcctgtta accgctacgt tgaagtttga tggtgatatc accgtacaac tgcaaggcga
    53581 cggcccaatg agtctggcgg tcatcaacgg taacaacaac cagcagatgc gcggtgtggc
    53641 tcgcgtacag ggcgaaattc cggaaaatgc cgacctgaaa acgctggtcg gcaatggtta
    53701 cgtggtgatc accattaccc cgagcgaagg cgaacgctat cagggcgtag ttggtctgga
    53761 aggtgatacc ctggctgcct gcctggaaga ttactttatg cgttctgaac agttgccgac
    53821 gcgcctgttt attcgcaccg gcgacgtaga cggcaaaccg gctgcaggcg gtatgttgtt
    53881 gcaggtaatg cctgcgcaaa atgcccagca ggacgacttt gatcacctgg caacgctaac
    53941 cgaaaccatc aaaactgaag aactgctgac cttaccggca aacgaagtgt tgtggcgttt
    54001 gtatcacgaa gaagaggtga cggtttacga tccgcagtat gtggagttca aatgcacctg
    54061 ctcgcgtgaa cgttgcgccg atgcgctgaa aacgctgcct gatgaagaag tcgatagcat
    54121 cctggcggaa gatggcgaaa ttgacatgca ttgtgattac tgcggtaacc actatctgtt
    54181 caatgcgatg gatattgctg aaatccgcaa caacgcgtct ccggcagatc cgcaagttca
    54241 ttaatgagta tgtccggcag agagggctct gccggatttt acgacttaat ggcctgatgt
    54301 gctgcgctta ccagcgccta tgaaataaat cgcaaattat tgttggtcag atacagcgtc
    54361 gtatccgata aaagcgttgt cacttactta agtttatttc cagcgtttca ccatctaccg
    54421 tcagatcgag ccacgctttc ggcctcgtcc ccagttttcc atccttcgca gctgtgagta
    54481 atttttcttt cgttatttcg ttcggaagta aactcatatt aagcgcgacc cattcttttc
    54541 tgtctgagtc aaagccatag acaatgactc tgtcatcatt aaaagcaaac aggatccgct
    54601 ccacctgacc atcactattc agatcttgct cgatcagtac gcaggcgtct ttttcaatac
    54661 aggtcatcac gttatagcga tcctggatta aggccgacca gaatgtcgca tccggtttaa
    54721 cagaaccagg ggcaattaac acattttcgg ctaatacttt ttccgatacc tgttcctgaa
    54781 gatgttgctc tccatctaac gccatcagca gatcccgcgc gcgtttcggg tctttcataa
    54841 acccggcatc gcttttcagc gactcaagcg ccgcacgtcc atagcgaccg ctctgttcga
    54901 gcatgtagat agttacctgg tccggcgtgt ttttgccgct ctgataacgc gccatatgac
    54961 tgttcacgct aatgcgcata ctgtccagca ccggcgaatt aagaagcacc agtatcacca
    55021 acaccaataa cgaaaccgca aggttcactt tgccctgaag aacaagggga ttttgcccat
    55081 tacgccagac gatactgaca aaatacccca gcgaccacac cagtaacacc agcaccgcca
    55141 gcgcgccctg caagcggtcg acagtccagc cgtactgagc gacccgcagc cataacgccc
    55201 aggcggcgac gaacacatac agcggagcaa ccagcaaagc ggttttaatc aggcaacgca
    55261 acggccccgt ccagggaagt gacgcttttt gcggatcgcg gacaatagcc attaagatca
    55321 attgcaaaaa ggccagcgtt aacagcaacc cggcggcgga gatgtggcga gaaatcgcgc
    55381 tcaggcccgt aaacggcagg gtgatgataa acatcagggt tagcaatgat actaacggca
    55441 gcaaccccgt ggcgattagc gtgaacaact tttgaataga gtcgattaaa cgtgactgtg
    55501 tacgcgcgag gatcaccgcc agtgcggtaa ccagacctaa tgtaagatac ataaaccagt
    55561 cggttgcaaa aaagagcgta ttgaaaaacg tgatgccaac aagtttaaac aactcacccc
    55621 acagtaaaag caccagccac gtcaggccat tggagagaaa aatcaccagt aatataagta
    55681 cgttatacca tactgactgg taaaagtagc tatagcggct actgccattg cggatacgaa
    55741 ggctttgttg tatccacggt agcaacaaca ttgccatcaa cagcagatag cagccaaaat
    55801 cccaaatcgc cttttcagct ctccaggggt tcatgccatc agtttgccac ttcagccaac
    55861 cgctcatccc tgtcgtggca ataaacacca gcgccagcca tccccaaagg cgcttctgtt
    55921 taaaagagat cacggagaag agtaaaacgg atgaaaacgc gacggtcgca ggcacgccat
    55981 aaacaatcca actgtgattt tttccggcaa gccaggcgat aagcaggtag caaaccagcc
    56041 cctgaagtaa tccggtagca atcatccccc agcgtgttgc cggtgaaagt tcaacgttat
    56101 ccatgttggt tatccagaat caaaaggtgg gttaattatc gcatccgggc agtagtattt
    56161 tgcttttttc agaaaataat caaaaaaagt tagcgtggtg aatcgatact ttaccgattg
    56221 aatttgcatc aatttcattc aggaatgcga ttccactcac aatattcccg ccatataaac
    56281 caagatttaa ccttttgaga acattttcca cacctaaaat gctatttctg cgataatagc
    56341 aaccgtttcg tgacaggaat cacggagttt tttgtcaaat atgaatttct ccagatacgt
    56401 aaatctatga gccttgtcgc ggttaacacc cccaaaaaga ctttactatt caggcaatac
    56461 atattggcta aggagcagtg aaatgcgcgt taacaatggt ttgaccccgc aagaactcga
    56521 ggcttatggt atcagtgacg tacatgatat cgtttacaac ccaagctacg acctgctgta
    56581 tcaggaagag ctcgatccga gcctgacagg ttatgagcgc ggggtgttaa ctaatctggg
    56641 tgccgttgcc gtcgataccg ggatcttcac cggtcgttca ccaaaagata agtatatcgt
    56701 ccgtgacgat accactcgcg atactttctg gtgggcagac aaaggcaaag gtaagaacga
    56761 taacaaacct ctctctccgg aaacctggca acatctgaaa ggcctggtga ccaaacagct
    56821 ttccggcaaa cgtctgttcg ttgtcgacgc cttctgtggt gcgaacccgg atactcgtct
    56881 ttccgtccgt ttcatcaccg aagtggcctg gcaggcgcat tttgtcaaaa acatgtttat
    56941 tcgcccgagc gatgaagagc tggcaggttt caaaccagac tttatcgtta tgaacggcgc
    57001 gaagtgcact aacccgcagt ggaaagaaca gggtctgaac tccgaaaact tcgtggcttt
    57061 taacctgacc gagcgcatgc agctgattgg cggcacctgg tacggcggcg aaatgaagaa
    57121 agggatgttc tcgatgatga actacctgct gccgctgaaa ggtatcgctt ctatgcactg
    57181 ctccgccaac gttggtgaga aaggcgatgt tgcggtgttc ttcggccttt ccggcaccgg
    57241 taaaaccacc ctttccaccg acccgaaacg ccgcctgatt ggcgatgacg aacacggctg
    57301 ggacgatgac ggtgtgttta atttcgaagg cggctgctac gcaaaaacta tcaagctgtc
    57361 gaaagaagcg gaacctgaaa tctacaacgc tattcgtcgt gatgcgttgc tggaaaacgt
    57421 caccgtacgt gaagatggca ctatcgactt tgatgatggt tcaaaaaccg agaacactcg
    57481 cgtttcttat ccgatctatc acatcgataa catcgttaag ccggtctcta aagcgggcca
    57541 cgcaacgaaa gttatcttcc tgaccgccga cgcctttggc gtgctgccgc cggtttctcg
    57601 tctgactgcc gatcaaaccc agtaccactt cctctctggc ttcaccgcca aactggccgg
    57661 tactgagcgt ggcatcaccg aaccaacgcc aaccttctcc gcctgcttcg gcgcggcgtt
    57721 cctgtcgctg cacccaactc agtacgcaga agtgctggta aaacgtatgc aggcggcagg
    57781 tgcgcaggcg tatctggtta acaccggctg gaacggcact ggcaaacgta tctccattaa
    57841 agatacccgc gccattatcg acgccatcct caacggttcg ctggataacg cagaaacctt
    57901 cactttgccg atgtttaacc tggcgatccc aaccgaactg ccgggcgtag acaccaggat
    57961 ccttgatccg cgtaacacat atgcttcccc ggaacagtgg caggaaaaag ctgaaacgct
    58021 ggcgaaactg tttatcgaca acttcgataa atacaccgac accccagcgg gcgccgcgct
    58081 ggtagcggca ggtccgaagc tgcaataatt tgaagctgga taatatctat ccagtatctt
    58141 agagaaagca aaacgggagg caccttcgcc tcccgttttt ttacccttct tttgtcgtgc
    58201 cctgcgcccg cgttaccggc actggcagcc aggcgcgaat ggaaagcccg ccccgctcgc
    58261 tggtgccaag ctccagcatc ccgttatggt tatccacgat acgctgcaca atcgccagcc
    58321 ctagccccgt gccgctaatg gtgcgcgcac tgtcgccgcg aacaaacggc tggaacaggt
    58381 gcttacgctg ttccggcgca attcccggac cgtcatcttc cacctggaac caggcgcgat
    58441 tcggctccgt tccgctgctg actttgatcc agccattgcc gtaacgggcg gcgttgacca
    58501 ccatattcgc caccgcgcgt ttgatcgaca gcgggtgcat tttcacttca atgctgccgg
    58561 ggtaaagcgc ggtttcaatt tcccgctcat agccactttc ggcagcaata acctcaccga
    58621 gtactgcgtt gagatccgcc atttccatcg gcatctcctg cccggtgcgc aggtagtcga
    58681 taaactgctc aatgatggcg ttgcactctt cgatatcttt attgatcgat tctgccaggt
    58741 agccatcctg ctcactcatc atctcggtcg ccagacgaat acgcgtcagc ggcgtgcgca
    58801 gatcatgact tacccctgcc atcagcagcg tgcggtcatc cgccagttgc ttaacaccag
    58861 ccgccatatg gttaaaggcg cgggtaacgg aacgcacctc ggacgcgcca tattcacgca
    58921 gcggcggcgg aataatccct ttaccaacct gcaaggctgc gtgttcgaga tcgaccaacg
    58981 gtcggttctg gatacgaata aacagccacg ccccgcctat cgccaatagc ataatcgcca
    59041 acgtatagcg gaacagcgga gaaaaatcgc cctgatgaat ttcggtcagc ggcacgcgta
    59101 cccagatatt gggcgacagc caggttttca gccagacgac aggcgaactt ttgttgacct
    59161 caacgcgcac ttccgtcggg ccgcccagtt gctgcgccat ctgatggctt aagaattcat
    59221 agtgttgcgc ccaacgcaga cctgcctctt cggcagcctc gttggagtag agagagatcc
    59281 ccagctcacg gtagatctcc cgacggaaag cgggaggcac aaccaactgc gtgccgtcct
    59341 ccagttgtag tttgtcggtc atcaacatac gcacttcgta tgcgaggact ttattaaact
    59401 gctggaggct cggcaaaatc gcgaagttca gtaccaccag ataagtcgtc accaagctgg
    59461 cgaacagcaa ggtgacgatg agcaataacg tacgggcaaa tgaacttcgt ggcgagaagc
    59521 gcaatcgcct catgctttag agccgtccgg tacaaagacg tagcccagac cccaaacggt
    59581 ctgaatgtaa cgcggatgcg ccggatcttc ttccaccatg cggcgcagac gcgaaatctg
    59641 cacatcgatg gagcgttcca ttgcggaata ttcacggcca cgggcaaggt tcatcagctt
    59701 atcgcgggag agcggctcac gcggatggct gaccagtgcc ttcagtaccg caaactcacc
    59761 gctggtgagc ggcatcggct catcttcgcg gaacatttcg cgcgtaccga ggttaagttt
    59821 gaacttaccg aaagcaatta ccgcctcttc ctgtgacggt gcgcctggca gttcgttcgc
    59881 ctgacgacgc agcaccgcac gaatacgggc cagcagttca cgcgggttaa acggttttgg
    59941 aatgtagtcg tcagcgccaa tctccaggcc tacgatacgg tccacttctt cccctttcgc
    60001 cgtcaccata atgatcggca tcgggttgct ctgactacga aggcgtcggc aaatcgacaa
    60061 gccatcttca ccaggtaaca ttaaatccag taccataaga tggaaagatt cacgagtcag
    60121 caggcgatcc atctgttctg cattagcgac gcttcgaacc tggaagcctt gttcggtgag
    60181 ataacgttcc agcagcgcac gcaggcgcat gtcgtcatcg accaccagaa tcttgtagtt
    60241 ctcttgcatt gtttgtactc ccaaaggttc gcaacaattt gtaagcgtgt attcttaaaa
    60301 aagctcacgt tcgtcaccag ctaaatctgg tatgaatttc agcctaaatt gttacaaagc
    60361 atattaaaca gcagcttaag tatacaattt attcggcgaa acattattga ttctgttgat
    60421 atgatcacgt tatacccaat gtgcgcatta tcaaacagac aaagggaatc aacgagatga
    60481 aaacgcccct ggttacccgg gaagggtatg aaaaactcaa acaagagctt aattatctct
    60541 ggcgtgaaga acgcccggag gtcacaaaaa aggtgacctg ggccgcaagt ctgggcgacc
    60601 gcagcgaaaa tgctgactat cagtataata aaaagcgtct gcgtgaaatc gaccgtcgcg
    60661 tgcgctatct cactaaatgc ctggaaaatc tcaaaatcgt cgattactcc cctcagcagg
    60721 aaggcaaagt cttttttggc gcgtgggtgg agattgaaaa cgacgatggc gtgactcacc
    60781 gtttccgtat tgtcggctac gatgaaattt ttggccgtaa agattacatc tctatcgatt
    60841 ccccgatggc ccgcgcattg ctgaaaaaag aagtcggcga tctggcggtg gtgaataccc
    60901 ctgccgggga agcgagctgg tatgttaatg ctatcgagta cgtgaaaccg taaggaagag
    60961 tcttaacctc ctgccgatgg ctggcatttt tgccagccag tccgtataac tatcccctga
    61021 tttttgatcc gaaaagatga actcaaacca tgatgaatga ttcgttctgc cgcattattg
    61081 cgggtgaaat tcaggcgcgc ccggaacagg ttgacgctgc cattcgcctg cttgacgaag
    61141 ggaataccgt gccgtttatc gcacgttatc gtaaggaaat caccggcggt ctggatgaca
    61201 cgcagctgcg taatctggaa acgcgtctga gctatctgcg cgagctggaa gagagacgtc
    61261 aggcgatcct caaatccatt tccgagcaag gcaaactcac cgatgatctg gcgaaggcca
    61321 tcaacgccac cctaagcaaa accgaacttg aagacctcta cctgccctac aaacctaaac
    61381 gccgcacccg cgggcaaatc gccattgaag cagggcttga gccgttggct gacctgctgt
    61441 ggagcgatcc gtcacacacg ccagaagtcg ccgctgcaca atatgttgat gccgataaag
    61501 gcgtggcaga taccaaagcc gcgctggatg gcgcgcgcta tatcctgatg gaacggtttg
    61561 ccgaagatgc cgcgctgctg gcgaaagtgc gtgattatct gtggaagaac gcgcatttgg
    61621 tttctacggt ggtgagcggt aaagaagagg aaggggcgaa attccgcgac tatttcgatc
    61681 atcacgaacc gttgtccacg gtgccttctc accgcgcgct ggcgatgttc cgtgggcgta
    61741 acgaaggcgt actccagctt tcgctgaatg ccgatccgca gttcgatgag ccgcccaaag
    61801 agagctattg cgagcaaatc atcatggatc accttggcct gcgcctgaac aatgccccgg
    61861 cggatagctg gcgcaaaggc gtagtgagct ggacctggcg catcaaggtg ctgatgcatc
    61921 tggaaaccga actgatgggt accgtgcgcg aacgcgcgga agatgaagca atcaacgtct
    61981 ttgcccgtaa cctgcacgat ctgctgatgg cggcccctgc cggactgcgt gcaacgatgg
    62041 gcctcgatcc gggtctgcgt accggggtaa aagtggcggt ggtcgatgcc actggcaaac
    62101 tggtggcgac cgataccatt tacccgcaca ccggacaagc cgcaaaagca gcgatgaccg
    62161 ttgctgcctt gtgtgaaaaa cataacgttg aactggtggc gatcggcaac ggtacagctt
    62221 cccgcgaaac tgaacgtttc tatctcgacg tgcagaagca gttcccgaaa gtgaccgcac
    62281 agaaagtgat cgtcagcgaa gctggcgcgt cggtttactc agcttccgag ctggcagcgc
    62341 aggagttccc ggatctcgac gtttcgctgc gtggtgcggt atctatcgcc cgccgtttgc
    62401 aggatccgct ggcggagctg gtgaaaatcg atccgaaatc tatcggcgta ggtcagtatc
    62461 agcatgacgt cagccagacg caactggccc gcaaactgga cgcagtagta gaagactgcg
    62521 taaacgccgt tggcgtcgat ctcaacactg cttctgttcc gctgttaacc cgcgtggcgg
    62581 gcctgacgcg catgatggcg caaaacatcg tggcctggcg cgatgagaac ggtcagttcc
    62641 agaaccgtca gcaactgctg aaagtgagcc gtctggggcc gaaagccttc gagcagtgcg
    62701 cgggcttctt gcgcattaac catggtgata acccgctgga tgcttctacc gtccacccgg
    62761 aagcctatcc ggtggtggaa cgcattctgg cagcaacaca gcaggcactg aaagatctga
    62821 tgggtaacag cagcgaactg cgtaacctga aagcgtctga ctttactgat gaaaaattcg
    62881 gtgtgccgac agtaactgac atcatcaaag agctggaaaa accgggtcgc gatccgcgtc
    62941 cggaatttaa aaccgctcag tttgccgatg gcgtcgagac aatgaacgac ctgcaaccgg
    63001 gtatgatcct cgaaggtgcg gtgaccaacg tcaccaactt tggcgcgttt gtcgatatcg
    63061 gcgtgcatca ggacggcctg gttcacatct cttcattgtc gaacaagttt gtagaagatc
    63121 cgcataccgt ggtgaaagcg ggcgacattg tgaaggtgaa agtgctggaa gtggatcttc
    63181 agcgtaaacg tatcgccctg actatgcgcc tagatgagca gcctggcgaa accaacgctc
    63241 gtcgcggcgg cggtaatgaa cgcccgcaaa acaaccgccc ggcagccaaa ccacgcggtc
    63301 gtgaagcgca gcctgccggt aatagcgcga tgatggatgc gctggcggcg gcaatgggca
    63361 aaaaacgtta aacgcccgta ctggcctacg gttcgaattt gcacgaaatc gtagggcaga
    63421 taaggcgttc acgccgcatc tggcaacgaa cgccttgcct gacataaaag tgccggagaa
    63481 catctccggc atttttattc cacagccaaa ctcataatat attccggcaa tatttatcat
    63541 ttcattaaca actgaaacct taattaaaca ttagccagtc cgggtaattc actattcgaa
    63601 ttatattttc gctgcgatat aaccttgagc cacatcaaca ttgagtcaga ttattattca
    63661 aaccaacatt cgcacacatt ttaagtattg ctgatagaaa ccattctcat tatcattgtg
    63721 ttgttgatta tttaatctct cctttgttgg caaatcatct ggtctcatgt cgctgtcaaa
    63781 cgccccatga ggtagttatc cagttaatga aaaacaagta ggcacctatg caatacactc
    63841 cagatactgc gtggaaaatc actggctttt cccgtgaaat cagcccggca tatcgccaaa
    63901 aactgctttc tcttggcatg ttacctggct cctcttttaa tgtggtgcgc gtcgctccac
    63961 tcggcgaccc cattcatatc gaaacccgtc gtgtgagcct ggtattacgc aaaaaagatc
    64021 tggccttatt agaagtggaa gcggtttcct gttaatacgg tgataacaac aatgaaaaaa
    64081 ttaaccatag gcttaattgg taatccaaat tctggcaaga caaccttatt taaccagctc
    64141 actggcgcac gtcagcgtgt aggtaactgg gctggcgtta ccgtcgaacg taaagaaggg
    64201 caattctcca ccaccgatca tcaggtcacg ctggtggacc tgcccggcac ctattctctg
    64261 actaccatct catcgcagac ctcgctcgat gagcaaatca cctgtcacta cattttgagt
    64321 ggcgacgccg acctgctgat taacgtggtg gatgcgtcta accttgagcg taacctgtac
    64381 ctgacgctac aactgctgga actcggcatt ccctgcattg tggcactgaa catgctcgac
    64441 attgccgaga agcaaaatat tcgtattgaa attgatgctc tgtcggcgcg tctgggctgt
    64501 ccggtgatcc cgctggtttc aacccgtggt cgcggtattg aagcgctcaa gctggcgatt
    64561 gatcgctata aagctaacga gaatgtggaa ctggtacatt acgcacagcc gctactcaac
    64621 gaagcagatt cactggcaaa agtgatgcct tccgacatcc cgctgaaaca acgtcgctgg
    64681 ctgggcctac aaatgctgga aggcgatatc tacagccgcg cctacgccgg tgaagcgtcg
    64741 cagcatcttg atgccgccct tgcccgtctg cgtaatgaga tggacgatcc ggcgctgcac
    64801 attgccgatg cgcgttacca atgcattgct gccatctgtg atgtggtaag caacaccctg
    64861 acggcagaac ccagccgttt caccactgcg gtagataaaa tcgtgctcaa ccgtttcctc
    64921 ggcctgccga ttttcctctt tgtgatgtac ctgatgttcc tgctggctat caacatcggc
    64981 ggggcgttac agccgctgtt tgacgtcggc tccgtggcgc tatttgtgca tggtattcaa
    65041 tggattggct acacgctcca cttcccggac tggctgacta tcttcctcgc ccagggcctg
    65101 ggtggcggta ttaacaccgt gctgccactg gtgccgcaga ttggcatgat gtacctgttc
    65161 ctctccttcc ttgaggactc cgggtatatg gcacgtgcgg cgtttgtgat ggaccgcctg
    65221 atgcaggcgc tgggcttgcc ggggaaatcc tttgtgccgc tgatcgttgg tttcggttgt
    65281 aacgtaccgt cggtaatggg tgcacgtacg cttgatgcac cgcgtgaacg tctgatgacc
    65341 atcatgatgg caccgtttat gtcctgcggc gcgcgtctgg ctatcttcgc agtatttgcg
    65401 gctgccttct tcgggcagaa tggtgcccta gcggttttct cgctgtatat gctcggtatc
    65461 gtgatggcgg tgctgactgg cctgatgctc aagtacacca tcatgcgcgg tgaagcgacg
    65521 ccgtttgtca tggagctgcc ggtctaccat gtaccacacg ttaaaagcct gattatccag
    65581 acctggcagc gtctgaaggg cttcgttctg cgtgctggta aagtgattat catcgtcagc
    65641 attttcctga gcgctttcaa cagcttctcg ttgagcggga aaatcgtcga taacatcaac
    65701 gactcggcgc tggcttccgt cagccgagtg ataaccccgg tcttcaagcc gattggcgta
    65761 catgaagata actggcaggc aacggttggc ctgtttacgg gcgcaatggc aaaagaagtg
    65821 gtggtgggta cgctcaacac cctctacacc gcagaaaata ttcaggacga agagttcaat
    65881 ccggcggaat tcaacctcgg tgaagagctg ttcagtgcgg tagatgaaac ctggcagagc
    65941 ctgaaagaca ccttcagcct tagcgtactg atgaacccca ttgaagctag caaaggcgac
    66001 ggtgaaatgg gtaccggggc gatgggcgtg atggatcaga aattcggtag cgcagctgcc
    66061 gcatacagct acctgatttt cgtcctgctg tatgtaccat gtatctcggt gatgggagcc
    66121 atcgcccgtg aatcaagccg tggctggatg ggcttctcca tcctgtgggg gctgaatatc
    66181 gcttactcac tggcaacatt gttctatcag gtcgccagct acagtcagca cccaacttac
    66241 agcctggtgt gcattctggc ggtaatcctg tttaacatcg tagttatcgg tctgctgcgc
    66301 cgcgcgcgta gccgggtgga tatcgaactg ctggcaaccc acaagtcggt aagcagttgc
    66361 tgcgcagcca gcaccaccgg tgattgccat taatggcttc acttattcag gtacgtgatt
    66421 tgctggcgtt acggggccgt atggaagcga cccagataag ccagacattg aacactccgc
    66481 agccaatgat taacgccatg ctgcaacagc tggaaagcat gggcaaagcc gtgcggattc
    66541 aggaagaacc tgacggctgc ctctctggca gttgtaaaag ctgcccggaa ggcaaagcct
    66601 gtctgcgcga gtggtgggcg ctgcgttaac catactccat cgcctgtttt gaaaagcccg
    66661 gtatgcgttt gcatccgggc ttttttgcgt acggctttcc ataaaaacgc aattcttgca
    66721 gcgcgacgta agttcctctg aaagcgtctc gcagggatga aaactcgcta atgcacagat
    66781 gtggagtggc gcgtagagtc gcggcattca aacaacaggt gaaggaacgc catgagtaaa
    66841 aagcagagtt ccaccccaca tgatgcgctg ttcaaactct ttttacgcca accggagacg
    66901 gcacgcgatt ttcttgcgtt tcatttaccg gcacccattc acgcgctctg tgatatgaaa
    66961 accctcaagc tggagtcgag cagctttatt gatgacgatc tgcgtgaaag ctattccgat
    67021 gtgctgtggt cggtgaaaac ggaacaagga ccaggataca tctattgtct gattgaacat
    67081 caaagcacct caaacaaact gatcgcattt cgcatgatgc gttacgctat tgccgcaatg
    67141 caaaatcacc ttgatgctgg atacaaaacg ttgccgatgg tggtgccatt gttgttttac
    67201 cacggtattg aaagccccta tccctattcg ctgtgttggc tggattgttt cgccgatccc
    67261 aaactggcaa ggcagcttta tgcctccgca tttccgctga ttgatgtcac cgtcatgcct
    67321 gatgatgaaa tcatgcagca ccgacgtatg gcgctgctgg agttaattca aaaacatatt
    67381 cgtcaacgcg atctgatggg gctggtagag caaatggcct gcttattaag tagtggatac
    67441 gctaatgaca gacaaatcaa agggctgttt aattacatac tgcaaactgg cgacgctgta
    67501 cgttttaacg attttatcga cggcgttgcc gaacgttcac cgaaacacaa ggagagttta
    67561 atgactattg cggaaagatt gcggcaggag ggggaacaat ccaaagccct gcatatagcc
    67621 aaaataatgc ttgaatccgg agtccctctt gcagacatca tgcgatttac cgggctgtca
    67681 gaagaagagt tggctgcggc gagtcagtag atactctacc ctgcttaagt gctactttgt
    67741 gctatcttgc atgtaacaca aagtagcact tagggaactg atatgcagac agtgaaatta
    67801 cggcaacaag gaggagccat gatcgttact atcccacgag atcttgccat cgatcttggc
    67861 tggtcaccgg gcacagagct taccgtggag aaaaaaggcg atagcgttaa tttgcgcgcc
    67921 acagagcaca aaccgcgtgg gcgtcttacc gtcgcgcagt tgttgagcca aatcgatgaa
    67981 agcgaaatta cggagctaaa tcagtccaca gaaggatggg ctgaagggaa aaaaggtaat
    68041 gaagcatggt aaaggcacgg acgccacatc gtggtgagat ctggtatttt aaccctgatc
    68101 cggttgccgg gcatgaactt caggggccac attattgcat tgtggtaacg gacaaaaaac
    68161 tcaacaatgt tttaaaagtt gctatgtgct gcccgatttc aacaggggca aatgcagcac
    68221 gttccacagg ggtgacggtg aacgtcctcc cccgtgatac gcaaaccggt aacctgcatg
    68281 gcgttgtact ttgtcaccag ctaaaagccg tcgatcttat tgcccgtggc gctaaatttc
    68341 ataccgttgc cgatgaagca ttgattagtg aagttatcag taaactggtg aatttaatcg
    68401 acccacaata attagctctc acttaccacc tacaccctct gcttcaacgc caccagcagg
    68461 tgacaaaact cgaccggatg cgaaataaac ggcgcatggg ccgctttggc gaagatatat
    68521 gattcgctgt gaggccaaag tttatccagc atcggcacca ctttgcgcgg caccagaccg
    68581 tcgagatagc catacaatcg caaaaacggc atggacacgt tttgcagcgg ctgacggaga
    68641 tcgaccgttt tcaggatttc cagcccgcca ttaagcacgt caacctccgg catcggtaac
    68701 gccagaacgg ttttcttcaa cgcccgcgca tcctggcgcg ccgtttcagt ccccatggtt
    68761 tgtaacgcca ggaaccgctc cactgtacgc tgaaaatcat cactgagttg ctgctgaaat
    68821 cccgccagca cgtccggttt tatccccggc cactcgtcac gagcactaaa acaaggtgac
    68881 gacgccacgg tgaccagcgc ctgaacacgc tcgggatggg ttaacgcaat ctggcttgcc
    68941 accagcccgc ccagactcca gcctaaccaa atggctttat caggtgcctg ttgcagcacg
    69001 gcttcggcca tatcagcaag tgacagcgca ccaaatcccc ggctacgccc gaagccgggc
    69061 aggtcaacaa ggtgcagcgt aaaatgcgag ctaagttcct cgtcaatgca acgccacact
    69121 tcggcattca gtccccatcc gtgcagcagc acaagatgaa cattcccctg acctttggtc
    69181 tgccaccaga tgttattcat ccgctattgt tttcttttga cttacaagga tgaacatatg
    69241 ctaacagtac cgggattatg ctggctatgc cgaatgccac tggcgttagg tcattggggg
    69301 atttgttcgg tctgttcacg cgccacccgc acagataaaa cgttatgccc acaatgtgga
    69361 ttacccgcca cacactccca tcttccctgc ggtcgctgcc tgcaaaaacc gccgccctgg
    69421 caaagactgg tcacggttgc cgactatgcg ccgccgttaa gtccgcttat ccaccagctt
    69481 aaattttccc ggcgcagtga aatcgccagc gccctgtcac gtctgttact attggaagtc
    69541 ttacacgctc gtcgcaccac cgggttgcaa ttgccggatc gcatcatcag cgttccgtta
    69601 tggcagcggc gtcactggcg tcggggattt aatcagagcg atttgctgtg tcagccgtta
    69661 tcacgctggt tgcactgcca atgggatagc gaagccgtca cacgtacacg ggccactgcg
    69721 acccagcatt ttctcagtgc ccggctgcgc aagcgcaacc tgaaaaatgc ctttcgtctt
    69781 gaattgcccg tgcaaggtcg ccatatggtg attgtggatg atgtcgttac caccggaagt
    69841 accgtcgcag agattgcgca gttgctttta cgcaatggtg cggcgactgt ccaggtctgg
    69901 tgcctttgtc gaaccttgta gagcctcgat gatgggcgta ttataaccaa ctaaaatagt
    69961 caactattag gccattacta tgatccgtat ttccgatgct gcacaagcgc actttgccaa
    70021 actgctggca aatcaggaag aagggacaca aatccgcgta tttgtgatta accctggcac
    70081 gcctaacgct gaatgtggtg tttcttattg tccgccggat gccgtggaag ccaccgacac
    70141 tgccctgaaa tttgacctgc tgaccgcgta tgttgatgag ttaagcgcac catacctgga
    70201 agatgcagag atcgactttg ttaccgacca gttgggttct cagttaacgc tgaaagcccc
    70261 gaacgccaaa atgcgtaaag tggcagacga tgcaccgctg atggagcgcg tggagtatat
    70321 gctgcagtcg cagatcaacc cacagcttgc tggtcacggt ggtcgcgttt cgctgatgga
    70381 aatcaccgaa gacggttacg ccattctgca atttggtggc ggctgtaacg gttgttccat
    70441 ggtcgatgtg acgctgaaag aagggatcga gaagcatctg ctgaacgaat tcccggagct
    70501 gaaaggtgtg cgcgatctca ccgaacacca gcgcggcgaa cactcctact actaagttat
    70561 cccctctttt gtagattgcc cgatgcgacg ctaaagcgtc atttcgggcc tacgttgaac
    70621 atgtgccaga cgttggcaca gcattgcttt ggcaaatccc tcccttcgtt tccccgcgat
    70681 aatatgacca acctctcata atttaaattt accccgctct ggtgattctc aaacgccaga
    70741 tgttacccgt atcattcaca tgggtaccaa acatactcct gacatctgac tacaataatt
    70801 agttttagtg ggtatcagtc gtggtgccgc aatatctctg ttcccgattg ggataattag
    70861 agtttgtcgt cagaaaattg acgttaccca taacaaatga aaggccaggt aaatcatgcc
    70921 attagtcatt gttgctatcg gtgtaatctt gttgttgctc ctgatgatcc gcttcaaaat
    70981 gaacggcttc atcgctctcg tcctcgtggc gcttgctgtt ggattaatgc aaggaatgcc
    71041 gctggataaa gttattggct ccatcaaagc cggtgtcggc gggacgctcg gtagccttgc
    71101 cctgatcatg ggttttggcg caatgctggg caaaatgctg gcagactgcg gtggcgcaca
    71161 acgtatcgcc accacgctga ttgccaaatt tggtaaaaag cacatccagt gggcggtggt
    71221 gttaaccggt tttaccgttg gttttgccct gttctatgaa gtgggcttcg tgctgatgct
    71281 gccgctggtg tttaccatcg cggcttccgc gaatattcca ctgctgtatg ttggtgtacc
    71341 aatggcggct gcactgtctg tgacccacgg cttcctgcca ccgcatccgg gcccgactgc
    71401 gattgccacc attttcaatg ccgatatggg taaaaccctg ctgtacggta ctattctggc
    71461 aatcccgacc gtgattctcg ccggtccggt ttacgctcgc gtgttgaaag gtatcgataa
    71521 gccaatcccg gaaggtctct acagcgcgaa aaccttcagc gaagaagaga tgccgagctt
    71581 tggcgtcagc gtctggacct ctctggtgcc ggttgtgctg atggcgatgc gtgcgattgc
    71641 cgaaatgatc ctgccgaaag gtcacgcttt cctgccggta gcggagttcc tcggtgaccc
    71701 ggtaatggca acgctgattg ccgtgctgat tgcgatgttc acctttggtc tgaaccgtgg
    71761 tcgttcaatg gatcagatta acgacacgct ggtttcttcc atcaaaatca ttgcgatgat
    71821 gctgttgatc atcggtggtg gcggtgcgtt caagcaggtg ctggtagaca gcggcgtgga
    71881 caaatacatt gcttccatga tgcacgaaac caacatttct ccgctgctga tggcctggtc
    71941 gattgctgcc gtactgcgta tcgcgctggg ttccgcaacc gttgcggcaa tcactgcggg
    72001 tggtatcgcg gcaccgctga ttgcaacgac gggtgttagc ccagagctga tggttattgc
    72061 ggtgggttcc ggtagtgtga ttttctctca tgtgaacgat ccgggcttct ggctgttcaa
    72121 agagtacttt aacctgacta tcgacgagac catcaaatcc tggtcgatgc tggaaaccat
    72181 tatctcggtg tgcggtctgg taggctgtct gctgctgaat atggtgattt gataacactg
    72241 actgccggat gcatcgcatc cggcatcaac cgcactctac ttcttcttcg ctgcagctct
    72301 gcgccgtctg tccaaatcct tcagcaactt gttcacgcca tcatcggcaa acatcgactc
    72361 aagcgttgcg gaaagcttgc gtcgccagtt tttatactgg taactggtgc caggaatatt
    72421 caccggttcg gccatatcca gccagtcttc cggctgtagt cctaacagag cactgttact
    72481 gtcggcaatg tagcgctgca aaccacggtt cagcgtcggc gtcatcgaca tcaacgatgc
    72541 cttatgcccg gcacgttttg gcagacaacc atatttatgc agtgcatcca gcagcccttg
    72601 cttcgccagt tcgcgatcct gatacagacc gcgcagtacc acttcatccg gatacagccc
    72661 cagggttttg cccagcgtta gatccccgct ctcccagtaa ccacgcagcg ttggcaggtc
    72721 atgtgtcgcc gcaaccgcca tcgactgctc cggatacgct ttcggtgcac ggaacgtctt
    72781 ctcgtggtcg ttttcgaaat agagcacttt gtaagagtac acaccgctgc tgcgcagctt
    72841 accgacaatc tctaccggta cggtaccgag atcttcacca atcaccatac agcgatgacg
    72901 tttactttcg agtgccagaa tcgagagcag atcatccacc ggatagtgaa catacgcgcc
    72961 ctgatctgcc gtctcgccat acggtatcca ccacaaacgc agcatcgaca tcacatggtc
    73021 aattcgtaat gcgccgcagt tttgcatatt ggcacgcaac agctcgataa acggttcata
    73081 ggcacgcgcg gtgatgatat gcgggtccat tggcggtaat ccccagttct gccccaacgg
    73141 gccgaggata tccggcggcg cgccaaccga tgctttcagg caatatagtt cacggtcaca
    73201 ccaggtttcc gccccacctt ccgctacgcc aaccgccaga tcacgataca agccaatcgg
    73261 catttcatag ccctggctta tctcccagca ggcggcaaac tggctgtaag ccagccactg
    73321 caaccagaga taaaaatcga cgtcatcacg atgttcttcg cagaactgac gcacttctgg
    73381 tgaatccacg ttcttataca tctctggcca tgcaggccag ccccagcgca tttcgtcctc
    73441 tttcacttgc tgggcatgta gcgcatcaaa ggctgcctgc cagaacaggc tgtcgccctg
    73501 ctctgcaaca aactggcgaa acgcggccat ctgctcatca tcacgttgcg cgaaaccttt
    73561 ccacgccatt cgtaatgctg tcatttttag ggcggtaacc gtggagtaat cgacccagtc
    73621 ggcatcgcgc gcctgttgca gcgtctgttg cgtggtcggc aactgccacc aggcctgagc
    73681 ctcttcgcta agatggaaat cttcaacggc gttaacgtcg atataaatca cattcagcca
    73741 acggcgagaa gacgggctgt atgggctggc gctctccgga tttgccggat agagcgcatg
    73801 aatcgggttc aggccaatga acgacccgcc acgttttgcc acatccacca gcatcgcttt
    73861 gagatcgcca aaatccccaa taccccagtt tttttccgat cgcagcgtat aaagctgaac
    73921 gcaggcaccc cacagctttt gtttattcag caaagcctgc ggttcgtaac aacgtttcgg
    73981 ggcgacaatc acccggcaat acgcgcgctg gtcgtcctgg gtgagtgtta gcgtgtgata
    74041 accttccggc agcttcgtcg gtagattgaa cgctttgccc cccgttacat ggcctttgta
    74101 ctgcgttcct tcttcggtgg tcagcagcca gctatattcg ccgctgccct ccaccaccat
    74161 cggcattttt ttgccgctgg tataaaccat gacattcggg actggcgtta ccgccacttt
    74221 cgtggcggta cgttgatgca tcgcgtcaag caaacgccgt ttggtttcgg cgctaatcga
    74281 ctgcggttta ccgtgggcat tgatgtaatt ggggctaatc cccgccgcca gcgcggcatt
    74341 atccagacgt ttgctttcca tcgagcttcc ttagcgtttt gcctgccaga tacgagcctg
    74401 ataatcgcga atagagcgat ccgagctaaa cataccgcag cgggcggtat tgaggatcgc
    74461 cgcgcgagtc caggcctcct ggtcgcggta cagcacatcc acctgctttt gtgcctcaac
    74521 ataggctgcg aaatccgcca tcaccagata cggatcgccg ccctgtttgc cgatactgtg
    74581 cagcatctgg tcgaaggcat gcttatcgcc gtcgctgtat ttaccgcttt ccaactcttt
    74641 caatactgcg tccagcacct tatctttctt ccgccatttc accgggtcgt agcctttggc
    74701 cagaatagcc ttcacttgtt ccacggtatg accaaaaata aagatatttt cttcaccgac
    74761 tttctcggcg atttcaacgt tcgcaccatc cagcgtaccg acagtaagcg caccattgag
    74821 cgccagtttc atattgccgg taccggaagc ttctttacct gcagtcgaaa tttgttcgga
    74881 gatatccgcc gccgggatca gtttttccgc cgccgaaacg caataatccg gcaggaacac
    74941 caccttcaac ttatcgccaa ccagtggatc gttgttgatc acgtcagcca ctttgttgat
    75001 cgcaaagata atattcttcg ccaggtagta gcccggtgcc gctttcgcgc cgaagaggaa
    75061 gacgcgcggt acgcgatcag cctgcgggtt ttcacgaatt tctttgtaca acgccagaat
    75121 atgcagcaga ttcaggtgct ggcgtttgta ctcatgcaga cgtttgatct gaatatcgaa
    75181 aatcgcctgt ggattgatct caataccggt acgaactttc acaaactccg ccagacggac
    75241 tttattcgcc tgcttgatct cgcgatattg ctgacggaat ttcgcatcat cagcgaattt
    75301 ttccagattg atcagctgat cgagatcgtt agcccactct ttttgcagtg atttatccaa
    75361 cagagccgcc agtgcagggt tgcactgttt gatccagcga cgtgaggtaa taccgttggt
    75421 gacgttatgg aatttgttcg gccatagctg gtgatattcc gggaacagat ctttcaccac
    75481 cagatccgag tgcagcgccg caacaccgtt caccgcgaaa ccgccaacca cacacaggtt
    75541 cgccatatgc acttgtttat cgtgcaccac cgccagtttg gcccacactt tttcatcgcc
    75601 cggccaggtt ttctccacca gcgttttaaa gcgagtatta atttcgttaa taatctgcat
    75661 atggcgcggc agtaagcctt tcaccagttt cacatcccag cgttccagcg cttctggcat
    75721 cagggtatgg ttggtgtaag cgaaagtttt gctggtaatg gcccaggcgt catcccagct
    75781 catctggtgc tcatcgatca gcacgcgcag cagttctgga atcgcgatag ttgggtgggt
    75841 atcgttcagc tgaataactt cgtaatccgc cagttcgtgc agtttacgcc ccgccagatg
    75901 atggcgacgc aaaatatccg ctaccgaaca ggcacactgg aagtactgct gcatcaagcg
    75961 cagcttttta ccggcagtat ggttgtcgtt tggatagaga actttggtca gtttttccgc
    76021 attgatgccc tgctgttcgg cacgcaggaa atcaccgtcg ttaaatttag tcagatcaaa
    76081 cggatgcgcg tgcgtcgcct gccacagacg cagcggctgc gccacgccat tacgatagcc
    76141 gacaacgggg agatcccacg cttgaccggt aatggtaaac tccggctccc agcgtccgtc
    76201 tttcgtcact ttaccgccaa tccctacctg cacatccagt gcttcgttgt ggcggaacca
    76261 cgggtagtta ctgcgatgcc agtcatccgg cgcttcaacc tgtttgccat cgacaaaaga
    76321 ctggcggaac aaaccatatt gatagttcag accgtaaccc gtcgcagact gaccgacagt
    76381 tgccattgag tcgaggaagc acgccgccag acgtcccaga ccaccgttac ccagcgccgg
    76441 gtcgatctct tcttccagca ggtccgtcag attgatgtca taagccttca acgaatcctg
    76501 tacatcctga taccagccga gattcaacag gttgttgccc gtcaggcgac caatcaaaaa
    76561 ctccattgag atgtagttaa catgtcgctg attcgccacc ggcttggcga atggctgagc
    76621 acgcagcatt tcggccagtg cttcactcac tgctagccac cactggcgag gagtcatttc
    76681 agccgcagaa tttaagccat aacgctgcca ctgacgtgaa agcgcttcct gaaattgctt
    76741 atcgttaaaa ataggttgtg acataggagt tccacttttc ttagattttc aacacaacgt
    76801 tatcgctagt ttaccaggct cgatgttgac cttcctcatc ctgcggggga ttaggcaggg
    76861 aggagttgcg gggatgagca aggaaatgtg atctcaacca cttaaagcta gtgcaaacca
    76921 caggattagc agcaaatcaa tgcaatacag cgcagaaaat ctgtatctaa gtgcaaaaaa
    76981 tggccgttgc gtattttcaa aaagcggaag gtaactctat aaattaagta aaggagtgaa
    77041 acagtttcac aagtaaaata tccagtgtgc tccatctcat tcttaataga tttattaaga
    77101 tcatcttttt agatggcact ttcatcagga atgaagaaga aacccttgct taaatgaatc
    77161 tgatgaacat aagggaaacc agtattcacg ctggatcagc gtcgttttag gtgagttgtt
    77221 aataaagatt tggaattgtg acacagtgca aattcagaca cataaaaaaa cgtcatcgct
    77281 tgcattagaa aggtttctgg ccgaccttat aaccattaat tacgaagcgc aaaaaaaata
    77341 atatttcctc attttccaca gtgaagtgat taactatgct gattccgtca aaactaagtc
    77401 gtccggttcg actcgaccat accgtggttc gtgagcgcct gctggctaaa ctttccggcg
    77461 cgaacaactt ccggctggcg ctgatcacga gtcctgcggg ctacggaaag accaccctca
    77521 tttcccagtg ggcggcaggc aaaaacgata tcggctggta ctcgctggat gaaggtgata
    77581 accagcaaga gcgtttcgcc agctatctca ttgccgccgt gcagcaggca accaacggtc
    77641 actgtgcgat atgtgagacg atggcgcaaa aacggcaata tgccagcctg acgtcactct
    77701 tcgcccagct tttcattgag ctggcggaat ggcatagccc actttatctg gtcatcgatg
    77761 actatcatct gatcactaat ccagtgatcc acgagtcaat gcgcttcttt attcgccatc
    77821 aaccagaaaa tctcaccctg gtggtgttgt cacgcaacct tccgcaactg ggcattgcca
    77881 atctgcgtgt tcgtgaccaa ctgctggaaa ttggcagtca gcaactggca tttacccatc
    77941 aggaagcgaa gcagtttttt gattgccgtc tgtcatcgcc gattgaagcc gcagaaagca
    78001 gtcggatttg cgatgacgtt tccggttggg cgacggcact acagctaatc gccctctccg
    78061 cctggcggga atcaatgcca gccatctttc ggattatctg gtcgatgagg ttttggataa
    78121 cgtcgatctc gcaacgcgcc attttctgtt gaaaagcgcc attttgcgct caatgaacga
    78181 tgccctcatc acccgtgtga ccggcgaatg cgtctcgaag agattgagcg tcaggggctg
    78241 tttttacagc ggatggatga taccggcgag tggttctgct atcacccgct gtttggcaac
    78301 ttcctgcgcc agcgctgcca gtgggaactg gcggcggagc tgccggaaat ccaccgtgcc
    78361 gccgcagaaa gctggatggc ccagggattt cccagcgaag cgattcatca tgcgctggcg
    78421 gcaggcgatg cgctgatgct gcgcgatatt ctgcttaatc acgcctggag tttgttcaac
    78481 catagcgaac tgtcgctgct ggaagagtcg cttaaggccc tgccgtggga cagtttgctg
    78541 gaaaatccgc agttagtgtt attgcaggcg tggctaatgc aaagccaaca tcgctatggc
    78601 gaagttaaca ccctgctagc ccgtgctgaa catgaaatca aggacatcag agaaggcacc
    78661 atgcacgcag aatttaacgc tctgcgcgcc caggtggcga ttaacgatgg taatccggaa
    78721 agcggtaatc gccgccgcgc acggtgccag gccggaagac cagacgctgc gatcccagct
    78781 ccgcgccttc caccgttgcc ctacaaattt ccgcagccgc ttttacggcg gtcagatgct
    78841 ggcgcagcag ccccggtttc gcccgtccgg ctcgaatgcc agtgatggta aatggctggc
    78901 cggttatcat cgacaggctc agcgccgagc gcaggatctg cccgccgcct tcgccctgtg
    78961 cgccatccag cgcaatcatc cttttcatca tttatccttt tacgcacacc acctgacgca
    79021 gggtgtagat aacttccacc agatcgcttt gtgccgccat caccgcatca atatctttat
    79081 acgccatcgg gatttcgtcg atcacttcgg catctttacg gcattccaca tgcgcggtgg
    79141 cacgaatttg gtcttccacg ctgaacagtt ttttcgcttt agttcggctc attacccgcc
    79201 cggcaccgtg gctgcacgaa cagaacgact cttcatttcc cagcccacgg acgataaagc
    79261 tttttgctcc catcgaaccg ggaataattc catattgacc agcacgcgca gacaccgcgc
    79321 ctttacgcgt cacgtagatc tcttcaccaa agtgctgttc tttttgcaca tagttgtggt
    79381 gacagttgat ctcttccatc gccagcgttt gtggctgtct gaccgttttc tgcgtaatgc
    79441 tctgcaacgc cgttaccaca ttttccatca tcgcatcgcg gttaaggctg gagaaaagct
    79501 gcgcccaggc cacggctctt aggtaatcat caaagtattc cgtaccttcc ataaagtacg
    79561 ccagatcacg cgacggcaac gtctcaagtt ggtcctgcat ctctttttgc gccagatcga
    79621 taaagtaagt cccgatggcg ttaccaattc cgcgtgaacc ggagtgcagc ataatccaca
    79681 cctgctccga ctcatcaagg cagatttcaa taaagtggtt acccgttccc agcgttccca
    79741 ggtgtttata gttgttagtg ttaaggaaac gcggatattt ttgcgttaac cactgataac
    79801 cggcctccag ctcagcccat ttcgcatcga cgttaaaagg cgggttttcc catgcgcctt
    79861 tatcacgttt acaacgcccg gtagtacgcc cgtgtggtac ggccgtttca atcgcttgac
    79921 gcagctccgc caggttttca ggcaggtctg ccgccgttaa cgcggtacgc agcgcgttca
    79981 ttccacagcc aatatccacg cccaccgccg ccggaataat cgcccctttg gtcgggatca
    80041 cgctaccaat ggtggaacct ttacccaggt gtacatcagg cattaccgca atatgtttga
    80101 aaataaacgg catcttcgcc gtattaataa gttgctgacg cgcatcggct tctaccggca
    80161 cgcctttggt ccacattttt accggggcat tttcagtggt cagtaattcg taattcattt
    80221 tgtttttctc ttttcgttgt ttgctgtcgt gataattgca accgtcgtgc cagaaaatta
    80281 aataagcaga ttaatttttt aattcattgt ttttaaatag gttaaatctt tacgtccgta
    80341 aacggagatt ttccacaaaa ccaattcacc gataatgaaa tatcgtcttt tataaggata
    80401 tctaagatgc gtaaaacagt ggcttttggc tttgtcggaa cggtgctgga ttatgccggg
    80461 cgcggcagtc agcgctggtc aaaatggcgt ccgacactct gtttatgcca gcaagaatcg
    80521 ttggtcatcg atcgactgga attattgcat gacgcccgct cgcgctcgct atttgaaacg
    80581 cttaaacgcg atatcgccag cgtttcgcca gaaacagaag tggtgagcgt tgagattgaa
    80641 ctgcataacc cgtgggattt cgaagaggtt tacgcctgcc tgcatgattt cgcccgtggt
    80701 tacgagtttc agccagaaaa agaagactat ttaattcaca tcaccaccgg cacccacgtc
    80761 gcgcagattt gctggtttct gctggcggaa gcgcgttatc tacccgcccg gttgatacaa
    80821 acttcaccac cgcgcaaaaa agaacaaccg cgcggtgccg gtgaagtgac gattatcgat
    80881 ctcgatctaa gccgttataa cgccatcgcc agccgctttg ccgaggaacg ccagcaaacg
    80941 cttgattttc ttaagtccgg cattgccacg cgtaaccccc acttcaaccg tatgattgag
    81001 cagatcgaaa aagtggcgat caaatcccgc gcgccgattc tgcttaacgg tccaaccggc
    81061 gcgggcaagt catttctggc gcgacgcatc ttcgagttaa aacaggcgcg gcatcagttt
    81121 agcggcgcgt ttaccggggc gcgggaatct cgtgaaggtt tattacgcag cgccaacggc
    81181 ggaatgttgt ttcttgatga gattggcgaa ctgggcgcag acgaacaggc aatgctgcta
    81241 aaagccattg aagagaaaac cttttacccg tttggcagcg atcgccaggt gagcagtgat
    81301 tttcagctta tcgccggaac ggtgcgcgat ttgcgccagc tggttgccga aggcaaattt
    81361 cgcgaagatc tgtacgcgcg gatcaatctc tggaccttca ccctgccggg tctacgccag
    81421 cgccaggaag atattgaacc gaaccttgat tatgaagtgg agcgccacgc cacactcact
    81481 ggcgacagcg tgcgttttaa caccgaagcg cggcgcgcct agttggcttt tgcgacctct
    81541 ccccaagcaa catggcgcgg taactttcgc gaactttctg ccagcatcac gcggatggcc
    81601 acctttgcca ctagcggacg catcactctg gacgtggttg aagatgagat aaaccgtctg
    81661 cgctataact ggcaggagag ccgcccctcc gcgcttacgg cgttgctggg cgcagaggca
    81721 gaaaacatcg atctcttcga ccgtatgcaa ctggaacacg ttatcgctat ctgccgccag
    81781 gcaaagtcgc tttctgcagc cggacgacag ctttttgatg tttcgcgcca gggcaaagcc
    81841 agcgtcaatg acgcggatcg gctacgcaaa tacctggcgc gttttggtct gacctgggaa
    81901 gcattgcagg ctcagcacag ctccagttga atatggtggt ccgtcagcac ctgcatcacg
    81961 cttactggcg gaggagcgtc ggtgtagacg gcatcaacca tgctgatgct acccatattg
    82021 accatcgcgt tacggccaaa tttcgagtga tcgacaacca gcataacgtg gcgcgagttc
    82081 tcaataatgg cgcgcttagt gcgaacttcg tggtaatcga actccagcag cgagccgtcg
    82141 ctatcgatgc cgctgatccc cagaatgccg aaatcaaggc ggaactggga gataaaatcg
    82201 agcgtcgctt cgccgatgat cccgccatcg cggctgcgta attcgccacc ggcgagaata
    82261 atacggaaat cctcttttac catcaacgtg ttagcgacgt tgagattgtt ggtgacaata
    82321 cgcaaattac tgtgattaag cagcgcgtgc gccaccgctt ccggcgtggt gccgatatcg
    82381 ataaacagcg tcgagccgtt ggggatttgc tccgccactt tgcgggcgat gcgctctttt
    82441 tcttcggtct gggtggcttt acgatcgtgc cacggcgtgt taaccgaact ggaaggcagc
    82501 gccgcgccgc cgtgatggcg caggatcagg ttttgctccg ccagctcatt gaggtcgcgg
    82561 cgaatagtct gcgggctgac ggagaagtgc tccaccagct cctcggtact gacataaccc
    82621 tgctgtttaa ccagttcgat aataccgttg tgacgttgtg tttgtttcat ttctaaatcc
    82681 ctggaattat tttcgttttc gcgcattgag cgaatcaaca aaagccatcg ctaaacccac
    82741 ggctaacccg gcgatgtgtg ctccgttcgc catcgacatc ccaaacaaat caaaccatcc
    82801 ggcgacaatc cagatcagcg caaagataat taacccacgt tgcaggtaaa tgccactttg
    82861 cggatcgcgt tcaccacgta gccagacgta gcccatcagc gcatacacca cgccagaaag
    82921 cccgccaaac cacggcccgc tgaatttttg ctgcacatag ccgcttaaca gggcgctgat
    82981 aagcgtaatg acaattagct taccgctacc gaggcgtttt tccaccgcac cgccgagata
    83041 ccaccaccag agcaggttaa agaggatatg catcagcgag aagtgcatta acgcgtgggt
    83101 gaagtaacgc cagaactcaa atttcagtgt tggatcgaat ggccaggcca gccatagcat
    83161 cacttcctga tcgccgagaa tttgcatggc gataaacacc accacgcagg cgatcatcat
    83221 cacccaggtg accggacctg cgcgttcacg caaggcggca aagaaaggat aacggcgata
    83281 atgcagacca ctgccggtat ggcccgcctg ccagctggcc gccagataac gcggatctgc
    83341 cgggttttcg agaaaacgcg ccagctccgc ccgcacgcgc tcggcctggg actcatccgc
    83401 cagccagacg tcgctttggt tatgttgttg aatcgtgagg ataacaccct gcgtcgccat
    83461 gtaatcaaca aacgcctgcg ccacgcgggg gttagcaaaa gaggtaatca tcaacatcgt
    83521 tgctgtcgct tattccacac aaaaggggac agtataaagc gttacgcgcc gtacgccacc
    83581 tctgcgggaa actgtcgctg ccaagcttca aagccgccgt caatgctata gaccacatcg
    83641 tagccctgtt gcagcagata ctgcgccgcg cctttgctgc tattgccgtg ataacacatc
    83701 accatcaccg gagtgtcaaa gtcgttatca cgcataaacg cgcccagcgt gtcgttggtt
    83761 aaatggaaag cctgcaccgc atgccccata gcgaaactct gtggatcgcg aatatcgacc
    83821 agcaccgcct ctttttcctg caacttctgg tgcgcgtcgg caacgttaat acattctaac
    83881 tgatccatgc gtctctcttt ctttacaaac aagtgggcaa atttaccgca cagtttacgt
    83941 cgaagcggca gataaacgcc ataatgttat acatatcact ctaaaatgtt ttttcaatgt
    84001 tacctaaagc gcgattcttt gctaatatgt tcgataacga acatttatga gctttaacga
    84061 aagtgaatga gggcagcatg gaaaccaaag atctgattgt gataggtggc ggcatcaatg
    84121 gtactggtat cgcggcagac gccgctggac gcggtttatc cgtgctgata ctggaggcgc
    84181 aggatctcgc ttgcgcgacc tcttccgcca gttcaaaact cattcacggt ggcctgcgct
    84241 accttgagca ctatgaattc cgcctggtca gcgaggcgct ggctgaacgt gaagtgctgc
    84301 tgaaaatggc cccgcatatc gccttcccga tgcgttttcg cctgccgcat cgtccgcatc
    84361 tgcgcccggc gtggatgatt cgcattggtc tgtttatgta cgatcatctg ggtaaacgca
    84421 ccagcctgcc gggatcaacc ggtttgcgtt ttggcgcaaa ctcagtgtta aaaccggaaa
    84481 ttaagcgcgg attcgaatat tctgactgtt gggtagacga cgcccgtctg gtactcgcca
    84541 acgcccagat ggtggtgcgt aaaggcggag aagtgcttac tcgtactcgc gccacctctg
    84601 ctcgccgcga aaacggcctg tggattgtgg aagcggaaga tatcgatacc ggcaaaaaat
    84661 acacctggca ggcgcgcggc ctggttaacg ccaccggccc gtgggtgaaa cagttcttcg
    84721 acgacgggat gcatctgccc tcaccttatg gcattcgcct gatcaaaggc agccatattg
    84781 tggtgccgcg cgtgcatacc caaaagcagg cctacattct gcaaaacgaa gataaacgta
    84841 ttgtgttcgt gatcccgtgg atggacgagt tttccatcat cggcaccacc gatgtggaat
    84901 acaaaggcga tccaaaagcg gtgaagattg aagagagtga aatcaactac ctgctgaaag
    84961 tgtataacgc gcactttaaa aagcagctaa gccgtgacga tatcgtctgg acctactccg
    85021 gtgtgcgtcc gctgtgtgat gatgagtccg actcaccgca ggctattacc cgtgattaca
    85081 cccttgatat ccatgatgaa aacggcaaag caccgctgct gtcggtattc ggcggtaagc
    85141 tgaccaccta ccgaaaactg gcggaacatg cgctggaaaa actaacgccg tattatcagg
    85201 gcattggccc ggcgtggacg aaagagagcg tgctgccggg tggtgccatt gaaggcgacc
    85261 gcgacgatta cgccgctcgc ctgcgccgcc gttacccgtt cctgacggaa tcgctggcac
    85321 gtcactacgc gcgcacatac ggcagcaaca gcgaactgct gctcggcaat gcgggggcga
    85381 taagcgacct cggggaggat ttcggtcatg agttctacga agcggaactg aaatacctgg
    85441 tggatcacga atgggtccgc cgcgccgacg atgccctgtg gcgtcgcaca aaacaaggca
    85501 tgtggctgaa tgcggatcaa caatctcgtg tgagtcagtg gctgttggag tatacgcagc
    85561 agaagttgtc gctggcgtcg taaattaacg taaggtggtc aggtcaggtt tcgatctggc
    85621 ctgagactga tgacaaacac aaaactgcct gatgcgctac gcttatcagg cctacgtggt
    85681 ttatgcaata tattgaattt gcatggtctt gtaggccaga taagacgttc acgtcgcatc
    85741 cggcatgaac aaagcgcact ttgtcaaaaa tctaacctac tttttaattc agggaattac
    85801 cgcaaagccc acgccatcat acccaacgta acaaaactca ggcacgttcc ccactcgccc
    85861 cgagaaaaat agcattaatg cgcccagcgt cagcataaaa atattgagca gaaggtaaat
    85921 tgttggcgta aagagtaaat tgcaaacctc aggaatagcg gcaagcccag cccccagcat
    85981 ggcaataacc gctgccaaaa attgcgtcag tattgggatg ccgaaaaaag tcattaccag
    86041 cgaggtcaaa atccattttc tattttgcat tattctttcc attctttctg aatggcgaaa
    86101 ttatactccc cttgcccctt ctggacactt ttccgaaatg atggcgaaaa aaacgggacc
    86161 ctttg
//
LOCUS       DAJVTL010000002        64753 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.002, whole genome shotgun sequence.
ACCESSION   DAJVTL010000002 DAJVTL010000000
VERSION     DAJVTL010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 64753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64753
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.002"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..636
                     /gene="lysS"
                     /locus_tag="OQQ26_000086"
     CDS             <1..636
                     /gene="lysS"
                     /locus_tag="OQQ26_000086"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="class II; LysRS2; catalyzes a two-step reaction,
                     first charging a lysine molecule by linking its carboxyl
                     group to the alpha-phosphate of ATP, followed by transfer
                     of the aminoacyl-adenylate to its tRNA; in Methanosarcina
                     barkeri, LysRS2 charges both tRNA molecules for lysine
                     that exist in this organism and in addition can charge the
                     tRNAPyl with lysine in the presence of LysRS1; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HCS1855713.1"
                     /translation="ESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRP
                     ETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAE
                     VSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEA
                     MFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK"
     gene            complement(755..928)
                     /gene="ghoT"
                     /locus_tag="OQQ26_000087"
     CDS             complement(755..928)
                     /gene="ghoT"
                     /locus_tag="OQQ26_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system toxin GhoT"
                     /protein_id="HCS1855714.1"
                     /translation="MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITW
                     PMSLPVALLFSLF"
     gene            complement(955..1251)
                     /gene="ghoS"
                     /locus_tag="OQQ26_000088"
     CDS             complement(955..1251)
                     /gene="ghoS"
                     /locus_tag="OQQ26_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HCS1855715.1"
                     /translation="MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEY
                     GIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK"
     gene            complement(1478..1750)
                     /locus_tag="OQQ26_000089"
                     /pseudo
     CDS             complement(1478..1750)
                     /locus_tag="OQQ26_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313136.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
     gene            complement(1762..1992)
                     /locus_tag="OQQ26_000090"
     CDS             complement(1762..1992)
                     /locus_tag="OQQ26_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HCS1855716.1"
                     /translation="MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLK
                     RKPWIMPDEVDVATVVKVIDTCPSGALKYRHK"
     gene            2173..3804
                     /gene="dcuS"
                     /locus_tag="OQQ26_000091"
     CDS             2173..3804
                     /gene="dcuS"
                     /locus_tag="OQQ26_000091"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DcuS"
                     /protein_id="HCS1855717.1"
                     /translation="MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQI
                     SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTD
                     MQSLRYSHPEAQRIGQPFKGDDILKALNGEENVAINRGFLAQALRVFTPIYDENHKQI
                     GVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEIS
                     TLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQV
                     VDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRL
                     DGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYILKTANNYQEEIGALLGKI
                     KSPVIAGFLISKINRATDLGHTLILNSESQLPDSGSEDQVATLITTLGNLIENALEAL
                     GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVK
                     QQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR"
     gene            3801..4520
                     /gene="dcuR"
                     /locus_tag="OQQ26_000092"
     CDS             3801..4520
                     /gene="dcuR"
                     /locus_tag="OQQ26_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DcuR"
                     /protein_id="HCS1855718.1"
                     /translation="MINVLIIDDDAMVAELNRRYVAQIPSFQCCGTASTLEKAKEIIF
                     NSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVD
                     YLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLT
                     PQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
                     RPVYRYRIQTEHYSLLKQYCQ"
     gene            5091..6431
                     /gene="dcuB"
                     /locus_tag="OQQ26_000093"
     CDS             5091..6431
                     /gene="dcuB"
                     /locus_tag="OQQ26_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuB"
                     /protein_id="HCS1855719.1"
                     /translation="MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
                     GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
                     LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
                     NVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREY
                     VYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMF
                     MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
                     EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
                     PTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
     gene            6509..8155
                     /gene="fumB"
                     /locus_tag="OQQ26_000094"
     CDS             6509..8155
                     /gene="fumB"
                     /locus_tag="OQQ26_000094"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HCS1855720.1"
                     /translation="MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEP
                     EALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQEL
                     LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
                     IEKLEQNPGQYIPEELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
                     RDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
                     LQSHGGSMIMLAKGNRSQQVTDACHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK"
     gene            8278..8907
                     /locus_tag="OQQ26_000095"
     CDS             8278..8907
                     /locus_tag="OQQ26_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HCS1855721.1"
                     /translation="MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIV
                     VPLLLATARRYPLTPLLYTLIFFHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDK
                     LGHFFQGLVPALVALEILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQ
                     GADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG"
     gene            complement(9046..10467)
                     /gene="melB"
                     /locus_tag="OQQ26_000096"
     CDS             complement(9046..10467)
                     /gene="melB"
                     /locus_tag="OQQ26_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HCS1855722.1"
                     /translation="MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEG
                     TTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLVGFVTA
                     GVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHL
                     TLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAG
                     AANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILL
                     NVGTALFWVLQVIMVADTVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLG
                     MIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDK
                     YRKVPPEPVHADIPVGAVSDVKA"
     gene            complement(10570..11925)
                     /gene="melA"
                     /locus_tag="OQQ26_000097"
     CDS             complement(10570..11925)
                     /gene="melA"
                     /locus_tag="OQQ26_000097"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HCS1855723.1"
                     /translation="MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPT
                     RLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGS
                     YVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKNASRIDIKPSREYASTIMNA
                     IWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLH
                     R"
     gene            12208..13116
                     /gene="melR"
                     /locus_tag="OQQ26_000098"
     CDS             12208..13116
                     /gene="melR"
                     /locus_tag="OQQ26_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HCS1855724.1"
                     /translation="MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWH
                     GQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL
                     FLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM
                     LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK
                     LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS
                     TFGKYVGMSPQQYRKLSQQRRQTFPG"
     gene            13315..15582
                     /gene="adiA"
                     /locus_tag="OQQ26_000099"
     CDS             13315..15582
                     /gene="adiA"
                     /locus_tag="OQQ26_000099"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418541.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HCS1855725.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     FAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMD
                     RDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP
                     GHQGGVGFTKIPAGRFYHDYYGENLFRTDMGIERTSLGSLLAHTGAFGESEKYAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQ
                     DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVVVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQD
                     CWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTACLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPD
                     TYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSI
                     ENLPGRIAANSVIPYPPGIPILLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEG
                     TEIIDGIYHVMCVKA"
     gene            15907..16668
                     /gene="adiY"
                     /locus_tag="OQQ26_000100"
     CDS             15907..16668
                     /gene="adiY"
                     /locus_tag="OQQ26_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator AdiY"
                     /protein_id="HCS1855726.1"
                     /translation="MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNI
                     IDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAA
                     QHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYMLRNCVSDNVYQIIESDIH
                     KDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQ
                     SCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA"
     gene            16805..18142
                     /gene="adiC"
                     /locus_tag="OQQ26_000101"
     CDS             16805..18142
                     /gene="adiC"
                     /locus_tag="OQQ26_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HCS1855727.1"
                     /translation="MSSDADAHKVGLIPVPLMVSGNIMGSGVFLLPANLASTGGIAIY
                     GWLVTIIGTLGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI
                     PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGA
                     IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARINKAGTPVAGLIIVGILM
                     TIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT
                     IAFIYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD"
     gene            18246..19889
                     /gene="eptA"
                     /locus_tag="OQQ26_000102"
     CDS             18246..19889
                     /gene="eptA"
                     /locus_tag="OQQ26_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase EptA"
                     /protein_id="HCS1855728.1"
                     /translation="MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDS
                     LHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDR
                     SMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGAN
                     ILVSVLLILLVASLFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVR
                     IGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTA
                     SCGTATAVSVPCMLSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACD
                     RVPHQNVTALNLPGQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNR
                     YPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSL
                     VYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQ
                     TQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE"
     gene            19886..20416
                     /locus_tag="OQQ26_000103"
     CDS             19886..20416
                     /locus_tag="OQQ26_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HCS1855729.1"
                     /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGH
                     YSLVVLDLGLPDEDGLHFLARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEEL
                     ILTPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARI
                     RTVRGFGYMLVANEEN"
     gene            20417..21517
                     /gene="pmrB"
                     /locus_tag="OQQ26_000104"
     CDS             20417..21517
                     /gene="pmrB"
                     /locus_tag="OQQ26_000104"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PmrB"
                     /protein_id="HCS1855730.1"
                     /translation="MNLMRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQI
                     QLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQ
                     KELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTP
                     LAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLE
                     DVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGS
                     NIMIKLQEDGGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQL
                     HHGQFFLQNRQETSGTRAWVRLKKDQNVANQI"
     gene            complement(21493..21582)
                     /gene="pmrR"
                     /locus_tag="OQQ26_000105"
     CDS             complement(21493..21582)
                     /gene="pmrR"
                     /locus_tag="OQQ26_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxT activity modulator PmrR"
                     /protein_id="HCS1855731.1"
                     /translation="MKNRVYESLTTVFSVLVVSSFLYIWFATF"
     gene            complement(21694..23196)
                     /gene="proP"
                     /locus_tag="OQQ26_000106"
     CDS             complement(21694..23196)
                     /gene="proP"
                     /locus_tag="OQQ26_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HCS1855732.1"
                     /translation="MLKRKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVY
                     GFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT
                     IVIMSISSFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRK
                     RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR
                     HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYY
                     MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVA
                     LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA
                     FNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGAT
                     PAASDIQEAKEILVEHYDNIEQKIDDIDHEIADLQAKRTRLVQQHPRIDE"
     gene            complement(23460..24338)
                     /locus_tag="OQQ26_000107"
     CDS             complement(23460..24338)
                     /locus_tag="OQQ26_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcZ-like family protein"
                     /protein_id="HCS1855733.1"
                     /translation="MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERL
                     MQELLSRVQLQTWTNGGMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMD
                     HRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYN
                     AWPLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTR
                     HYYHQWFASSTVPTGGDHADFLSWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQ
                     RLVGAMVEEIFSVNLA"
     gene            complement(24335..26558)
                     /gene="crfC"
                     /locus_tag="OQQ26_000108"
                     /pseudo
     CDS             complement(24335..26558)
                     /gene="crfC"
                     /locus_tag="OQQ26_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709832.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="clamp-binding protein CrfC"
     gene            26960..27295
                     /locus_tag="OQQ26_000109"
     CDS             26960..27295
                     /locus_tag="OQQ26_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HCS1855734.1"
                     /translation="MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIV
                     KDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
     gene            27455..27898
                     /gene="yjdN"
                     /locus_tag="OQQ26_000110"
     CDS             27455..27898
                     /gene="yjdN"
                     /locus_tag="OQQ26_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HCS1855735.1"
                     /translation="MPLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDS
                     AENSPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRW
                     FDNLAANGKIEMAWQETFWAHGFGKVTDKFDVPWMINVVKQQPTQ"
     gene            28031..28819
                     /gene="phnC"
                     /locus_tag="OQQ26_000111"
     CDS             28031..28819
                     /gene="phnC"
                     /locus_tag="OQQ26_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HCS1855736.1"
                     /translation="MQTIIRVEQLSKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKS
                     TLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLS
                     VLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
                     VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALR
                     YCERIVALRQGHVFYDGSSQLFDNERFDHLYRSINRIEENAKAA"
     gene            28844..29860
                     /gene="phnD"
                     /locus_tag="OQQ26_000112"
     CDS             28844..29860
                     /gene="phnD"
                     /locus_tag="OQQ26_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1855737.1"
                     /translation="MNAKIIASLAFTSMFSLSTLLTPAHAEEQEKALNFGIISTESQQ
                     NLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRA
                     NGQVFAQTVAADGSPGYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVP
                     GYYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKE
                     LKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASS
                     DLQLVPIRQLALFKEMQSVKGNKGLNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVS
                     KAVQ"
     gene            29974..30753
                     /gene="phnE"
                     /locus_tag="OQQ26_000113"
                     /pseudo
     CDS             29974..30753
                     /gene="phnE"
                     /locus_tag="OQQ26_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313113.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
     gene            30774..31499
                     /gene="phnF"
                     /locus_tag="OQQ26_000114"
     CDS             30774..31499
                     /gene="phnF"
                     /locus_tag="OQQ26_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HCS1855738.1"
                     /translation="MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAAR
                     FEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPT
                     SEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQ
                     RFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDG
                     ESSPAEYSVSLTRADMIEFTMEH"
     gene            31500..31952
                     /gene="phnG"
                     /locus_tag="OQQ26_000115"
     CDS             31500..31952
                     /gene="phnG"
                     /locus_tag="OQQ26_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HCS1855739.1"
                     /translation="MHADTATRQHWMSVLAHSQPAELAARLNALNITADYEMIRTAET
                     GLVQIQARMGGTGERFFAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALM
                     QQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA"
     gene            31949..32533
                     /gene="phnH"
                     /locus_tag="OQQ26_000116"
     CDS             31949..32533
                     /gene="phnH"
                     /locus_tag="OQQ26_000116"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HCS1855740.1"
                     /translation="MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPL
                     NIATTSVLLTLADNDTPVWLAAPLSNDIVNQSLRFHTNAPLVSQPELATFAVTDDGIS
                     SEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHE
                     LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC"
     gene            32533..33597
                     /gene="phnI"
                     /locus_tag="OQQ26_000117"
     CDS             32533..33597
                     /gene="phnI"
                     /locus_tag="OQQ26_000117"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate synthase subunit PhnI"
                     /protein_id="HCS1855741.1"
                     /translation="MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLA
                     VDRVMTEGGVADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLE
                     RRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLA
                     RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRN
                     HPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLV
                     FGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHY
                     VDFQAELELLKRLQQEQNHG"
     gene            33590..34435
                     /gene="phnJ"
                     /locus_tag="OQQ26_000118"
     CDS             33590..34435
                     /gene="phnJ"
                     /locus_tag="OQQ26_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HCS1855742.1"
                     /translation="MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPM
                     PYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDAT
                     LIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED
                     IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPP
                     FTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQS
                     EAKSQ"
     gene            34432..35190
                     /gene="phnK"
                     /locus_tag="OQQ26_000119"
     CDS             34432..35190
                     /gene="phnK"
                     /locus_tag="OQQ26_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HCS1855743.1"
                     /translation="MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGK
                     TTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSA
                     GGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNL
                     VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLV
                     MKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN"
     gene            35301..35981
                     /gene="phnL"
                     /locus_tag="OQQ26_000120"
     CDS             35301..35981
                     /gene="phnL"
                     /locus_tag="OQQ26_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HCS1855744.1"
                     /translation="MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSG
                     SGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVI
                     PRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI
                     ARGFIVDYPTLLLDEPTASLDAKNSAAVVELIHEAKARGAAIVGIFHNEAVRNDVADR
                     LHPMGASS"
     gene            35978..37114
                     /gene="phnM"
                     /locus_tag="OQQ26_000121"
     CDS             35978..37114
                     /gene="phnM"
                     /locus_tag="OQQ26_000121"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HCS1855745.1"
                     /translation="MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEG
                     GWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVR
                     DGGDRLENLEKMINAIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLV
                     SLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRETIAAM
                     CRARQIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEVSCRHGMNVLMGAPNIVR
                     GGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDESNRFTLPQAVKLVTKN
                     PAQALNLQDRGVIGEGKRADLVLAHRKDNHIHIDHVWRQGKRVF"
     gene            37114..37671
                     /gene="phnN"
                     /locus_tag="OQQ26_000122"
     CDS             37114..37671
                     /gene="phnN"
                     /locus_tag="OQQ26_000122"
                     /EC_number="2.7.4.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 1,5-bisphosphokinase"
                     /protein_id="HCS1855746.1"
                     /translation="MMGKLIWLMGPSGSGKDSLLAEIRLREQTQLLVAHRYITRDASA
                     GSENHIALSEQGFFTRAGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHL
                     PQARARYQSALLPICLQVSPEILRQRLENRGRENASEINAQLARAARYTPQDCHTLNN
                     DGSLRQSVDTLLTLIHQKEKHHACL"
     gene            37658..38092
                     /gene="phnO"
                     /locus_tag="OQQ26_000123"
     CDS             37658..38092
                     /gene="phnO"
                     /locus_tag="OQQ26_000123"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoalkylphosphonate N-acetyltransferase"
                     /protein_id="HCS1855747.1"
                     /translation="MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRD
                     PNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAE
                     EEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHLRFTKAL"
     gene            38094..38852
                     /gene="phnP"
                     /locus_tag="OQQ26_000124"
     CDS             38094..38852
                     /gene="phnP"
                     /locus_tag="OQQ26_000124"
                     /EC_number="3.1.4.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism protein PhnP"
                     /protein_id="HCS1855748.1"
                     /translation="MSLPLTLTGTGGAQGVPAWGCECAACDRARRSPQYRRQPCSGVV
                     KFNDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPP
                     DEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVA
                     WLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALNQVIRSPRV
                     ILTHISHQFDAWLMENALPSGFEAGFDGMEIGVA"
     gene            complement(38936..39262)
                     /locus_tag="OQQ26_000125"
     CDS             complement(38936..39262)
                     /locus_tag="OQQ26_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001612194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855749.1"
                     /translation="MLRRSSDKQRVLTLSTVPAQADIIDDTIGKIQQAINDAYNPDRG
                     RDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRM
                     EDEYGR"
     gene            39221..39406
                     /locus_tag="OQQ26_000126"
                     /pseudo
     CDS             39221..39406
                     /locus_tag="OQQ26_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            39461..40144
                     /locus_tag="OQQ26_000127"
     CDS             39461..40144
                     /locus_tag="OQQ26_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000830346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lyxose/D-mannose family sugar isomerase"
                     /protein_id="HCS1855750.1"
                     /translation="MKRSAINNILGHTRQFFSQHDVHLPPFANFSPAQWQQLDTAAWE
                     EVFDLKLGWDVTAFGGNNFAAQGLTLFTLRNGSAKGMPYVKCYAEKIMHVRDAQVTPM
                     HFHWRKREDIINRGGGNLIVELWNADSNEQTVDTDVTVVIDGCRQTHVAGSQLRLSPG
                     ESICLPPGLYHSFWAETGFGDVLVGEVSSVNDDDHDNHFLQPLDRYNLIDEDEPAQLV
                     LCNEYRQFL"
     gene            40159..41019
                     /locus_tag="OQQ26_000128"
     CDS             40159..41019
                     /locus_tag="OQQ26_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketose 1,6-bisphosphate aldolase"
                     /protein_id="HCS1855751.1"
                     /translation="MPLISLAEGLAHAREHHYALGAFNVLDSHFLRALFAAARQERSP
                     FIINIAEVHFKYISLDSLVETVKFEAARQAIPVVLNLDHGLHFESVAQALRLGFSSVM
                     FDGSTLGYEENIRQTREVVKMCHAVGVSVEAELGAVGGDEGGALYGHADESLFTDPQL
                     ARDFVDRTGIDALAVAIGNAHGKYRGEPKLDFPRLDAIRQQAAIPLVLHGGSGIRDAD
                     FRRAIELGIHKINFYTGMSQAALAAVEARMAHRQPMYDEFAELLLAVEAAISDTVAQQ
                     MRIFGSAGQA"
     gene            41016..42017
                     /locus_tag="OQQ26_000129"
     CDS             41016..42017
                     /locus_tag="OQQ26_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HCS1855752.1"
                     /translation="MMERKGIIAAGNMLVDHVHQIIQWPERGWLAEITHSERSTGGAP
                     LNVLLTLAKMRTGLPLQAVGLIGQGSDGDYIMAMLEQYHVNRQHVQRTTFAPTSMSQV
                     MTDPSGQRTFFHSPGTNRLLDLPAFDQLDNTMKIFHLGYLLLLDSLDMPDDVYGTRSA
                     RLLAQMRDTGFETSLDLVSRKGDPRYQPLVLPALRHLDYLVINELEAGEFSGLEIRLP
                     NGEPHIAHIAAAARELLDAGVRQRVVIHCPEGAWGETPEQCGVWIPSQKLEQREIIGS
                     VGASDAFCAGFLYGCHERWTLTESIKLAHACARASLLCANAIDGAKTLEELQTEMSD"
     gene            complement(42014..42718)
                     /locus_tag="OQQ26_000130"
     CDS             complement(42014..42718)
                     /locus_tag="OQQ26_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCS1855753.1"
                     /translation="MKPVVLVVDDDTAICALLQDVLSEHVFTVSVSHTGQEAISRIEG
                     EPDIALVVLDMMLPDTNGLRVLQQIQKLRPALPVVMLTGMGSESDVVVGLEMGADDYI
                     CKPFTPRVVVARLKAVLRRVGALAANEEKNAGLSFNGWYLDTIRCQLHSPLQHVELTQ
                     GEYGLLLALAQNARRVLSREQLLAFTHSDSVEVFDRTIDVLIMRLRRKIELNPHQPML
                     IKTLRGLGYVFAADVH"
     gene            43009..44959
                     /gene="yjcS"
                     /locus_tag="OQQ26_000131"
                     /pseudo
     CDS             43009..44959
                     /gene="yjcS"
                     /locus_tag="OQQ26_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl sulfatase YjcS"
     gene            45168..45443
                     /locus_tag="OQQ26_000132"
     CDS             45168..45443
                     /locus_tag="OQQ26_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855754.1"
                     /translation="MPTVLSRMAMQLKKTVWIIPVFMVSGCSLSPAIPVIGAYYPSWF
                     FCAIASLILTLITRRIIQRANINLAFVGIIYTALFALYAMLFWLAFF"
     gene            45462..46493
                     /gene="mdtN"
                     /locus_tag="OQQ26_000133"
     CDS             45462..46493
                     /gene="mdtN"
                     /locus_tag="OQQ26_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter periplasmic adaptor
                     subunit MdtN"
                     /protein_id="HCS1855755.1"
                     /translation="MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYA
                     SADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQI
                     MLTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTA
                     QRAAEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGR
                     VISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKT
                     FEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGA
                     SAVANLEPQ"
     gene            46493..48568
                     /gene="mdtO"
                     /locus_tag="OQQ26_000134"
     CDS             46493..48568
                     /gene="mdtO"
                     /locus_tag="OQQ26_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313090.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter permease subunit
                     MdtO"
                     /protein_id="HCS1855756.1"
                     /translation="MSALNSLPLPVVRLLAFFHEELSERRPGRVPQIVQLWVGCLLVI
                     LISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEP
                     LIRLIIAGPLLMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCI
                     VVGLYPTLLMTLIGVLWFPSRAITQMHQALNDRLDDAISHLTDSLAPLPETRIEREAL
                     ALQKLNVFCLADDANWRTQSAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKL
                     ASEINKLQHAITEGQCWQSDWRISESEAMAARECNLENICQTLLQLGQMDPNTPPTPA
                     AKPPSMAAAKPPSMAADAFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCV
                     IVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAW
                     IATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFV
                     WPESEARTLPQKLAGALGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQR
                     VALERQLDSEERALLIERSQTVIRQGRDILHAWDATWNSAQALDNALQPDRAGQFADA
                     LEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPA
                     TEQAQGATQ"
     gene            48565..50030
                     /gene="mdtP"
                     /locus_tag="OQQ26_000135"
                     /pseudo
     CDS             48565..50030
                     /gene="mdtP"
                     /locus_tag="OQQ26_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709855.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MdtP"
     gene            50228..50647
                     /locus_tag="OQQ26_000136"
     CDS             50228..50647
                     /locus_tag="OQQ26_000136"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HCS1855757.1"
                     /translation="MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLK
                     GYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDA
                     IQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARV"
     gene            50696..51724
                     /locus_tag="OQQ26_000137"
     CDS             50696..51724
                     /locus_tag="OQQ26_000137"
                     /inference="COORDINATES: protein motif:HMM:NF012602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HCS1855758.1"
                     /translation="MSNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIV
                     CDPRKIETARIADMHIALKNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKI
                     VEGYTPESVEDITGVSASEIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLA
                     MLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVES
                     LPAHTGYRISELPHRAAHGEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFM
                     TKTASAADVILPSTSWGEHEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMG
                     YPMHYNNT"
     gene            51740..52375
                     /locus_tag="OQQ26_000138"
     CDS             51740..52375
                     /locus_tag="OQQ26_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001216201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HCS1855759.1"
                     /translation="MRHLCPDFYGATYEKMGELGFIQWPCRDTSDADQGTSYLFKEKF
                     DTPNGLAQFFTCDWVAPIDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPS
                     YAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGACNEL
                     VTENLSPITKTPEYKYCAVRVEPIADQRAAEQYVIDEYNKLKTRLREAALA"
     gene            52469..53158
                     /locus_tag="OQQ26_000139"
     CDS             52469..53158
                     /locus_tag="OQQ26_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HCS1855760.1"
                     /translation="MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADS
                     WFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSK
                     EGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKA
                     DDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDT
                     GCEEFEKLTNG"
     gene            complement(53237..54550)
                     /gene="gltP"
                     /locus_tag="OQQ26_000140"
     CDS             complement(53237..54550)
                     /gene="gltP"
                     /locus_tag="OQQ26_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HCS1855761.1"
                     /translation="MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPA
                     GDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITL
                     ANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVT
                     VANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ"
     gene            complement(54892..55488)
                     /gene="nrfG"
                     /locus_tag="OQQ26_000141"
     CDS             complement(54892..55488)
                     /gene="nrfG"
                     /locus_tag="OQQ26_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HCS1855762.1"
                     /translation="MKQPQIPVKMLTTLTILMVFLCVGSYLLSPKWQAVRAEYQRQRD
                     PLHQFASQQTPEVQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL
                     RGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDFNEITALMLLASDAFMQANY
                     AQAIELWQKVMDLNSPRINRTQLVESINMAKLLQRRSD"
     gene            complement(55485..55868)
                     /gene="nrfF"
                     /locus_tag="OQQ26_000142"
     CDS             complement(55485..55868)
                     /gene="nrfF"
                     /locus_tag="OQQ26_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HCS1855763.1"
                     /translation="MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRC
                     PQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQT
                     LVLWALPVVLLLLMALILWRVRAKR"
     gene            complement(55861..57579)
                     /locus_tag="OQQ26_000143"
     CDS             complement(55861..57579)
                     /locus_tag="OQQ26_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014640253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HCS1855764.1"
                     /translation="MDVFLPEVGFLALLLSLGVNVLTPLTAFAGVRLRWPAMMRLTCI
                     GILAQFAFLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLW
                     VLLLSAWSALFAWHYRQQSDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEG
                     RDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDAASARICWRWALPGW
                     SALTAGIILGSWWAYCELGLGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCH
                     WSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGW
                     RARDGGPAVRFSVLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPY
                     FNRATLPFGLLMLVVIVLARFVSGKRAQLPALVAHAGVLLFAAGIVVSSVSRQEISLN
                     LQPGQQVTLAGYTFRFERLDLQARGNYTSEKAIVALFDHRQRIGELTPERRFYEARRQ
                     QMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWR
                     GKKRDE"
     gene            complement(57599..58555)
                     /gene="nrfD"
                     /locus_tag="OQQ26_000144"
     CDS             complement(57599..58555)
                     /gene="nrfD"
                     /locus_tag="OQQ26_000144"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HCS1855765.1"
                     /translation="MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLTVLLRRFYPQ
                     AGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
                     LYMVVLVLWLAKIFEHDLLALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRKNPHSTEAHFVH
                     RMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPM
                     LLKPWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA"
     gene            complement(58552..59223)
                     /gene="nrfC"
                     /locus_tag="OQQ26_000145"
     CDS             complement(58552..59223)
                     /gene="nrfC"
                     /locus_tag="OQQ26_000145"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HCS1855766.1"
                     /translation="MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
                     QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKY
                     GEVSQ"
     gene            complement(59220..59786)
                     /gene="nrfB"
                     /locus_tag="OQQ26_000146"
     CDS             complement(59220..59786)
                     /gene="nrfB"
                     /locus_tag="OQQ26_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HCS1855767.1"
                     /translation="MSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRN
                     PDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEP
                     MYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRI
                     KICVDCHSDQRTNPNFNPASVPLLKEQP"
     gene            complement(59831..61267)
                     /gene="nrfA"
                     /locus_tag="OQQ26_000147"
     CDS             complement(59831..61267)
                     /gene="nrfA"
                     /locus_tag="OQQ26_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HCS1855768.1"
                     /translation="MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNET
                     FAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKSRGHAFAVTDVR
                     ETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGC
                     ADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYF
                     DGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHG
                     KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQ
                     SINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHM
                     HAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQ
                     IKAEKQDFIKTVIPQWEEQARKNGLLSQ"
     gene            61660..63618
                     /gene="acs"
                     /locus_tag="OQQ26_000148"
     CDS             61660..63618
                     /gene="acs"
                     /locus_tag="OQQ26_000148"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HCS1855769.1"
                     /translation="MSQIHKHTIPANIADRCLINPQQYEAMYQQSINVPDTFWGEQGK
                     ILDWIKPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDA
                     SQSKHISYKELHRDVCRFANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHS
                     VIFGGFSSEAVAGRIIDSNSRLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVM
                     VLKRTGGNIDWQEGRDLWWHDLVEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLH
                     TTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVP
                     NWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINP
                     EAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVD
                     NEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDG
                     YYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHNIKGQAIYAYVTLN
                     HGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTS
                     NLGDTSTLADPGVVEKLLEEKQAIAMPS"
     gene            63751..64065
                     /locus_tag="OQQ26_000149"
     CDS             63751..64065
                     /locus_tag="OQQ26_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HCS1855770.1"
                     /translation="MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLI
                     AFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ
                     AS"
     gene            64062..>64753
                     /gene="actP"
                     /locus_tag="OQQ26_000150"
     CDS             64062..>64753
                     /gene="actP"
                     /locus_tag="OQQ26_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418491.1"
                     /note="member of the sodium:solute symporter family;
                     cotranscribed with the acs gene which encodes acetyl
                     coenzyme A synthase; mutations affect acetate uptake;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HCS1855771.1"
                     /translation="MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVG"
BASE COUNT        15770 a        17597 c        16688 g        14698 t
ORIGIN      
        1 gagtcactgt tccgcaccct ggcacaagag gttcttggta ccactaaagt cacttatggc
       61 gagcatgtgt ttgatttcgg caaaccgttt gaaaaactca ccatgcgcga agcaatcaaa
      121 aaatatcgtc cagaaaccga tatggccgac ctggataatt ttgatgctgc taaagcatta
      181 gctgaatcta tcggtattac ggtagagaaa agctgggggc tgggacgtat tgtcacggag
      241 atctttgatg aagtggcaga agcacatctg attcagccaa cctttattac ggaatatccg
      301 gcagaagtgt caccgctggc gcgccgtaat gatgttaacc cggaaatcac cgaccgtttt
      361 gaattcttca tcggtggtcg tgaaatcggt aatggtttta gcgaattaaa cgacgcagaa
      421 gatcaggctg aacgtttcca ggaacaggtt aacgctaaag ctgcaggtga cgacgaagcc
      481 atgttctatg acgaagatta cgtgactgcg ctggaatatg gtctgccgcc aaccgctggt
      541 ctgggtattg gtatcgaccg aatgattatg ctgtttacta acagccatac tattcgcgac
      601 gttattctct tcccggcgat gcgcccacag aaataaattt cactttaatg aacgaagcag
      661 tcaggcgact gcttcgttca tcgttccgca aatccagttt tgaggagaga cgcttcgttt
      721 cacgataacc agcgggtcca ctcaactaca gctcctaaaa gagagaaaaa agtaatgcca
      781 caggcagact cattggccag gttattccga ccaggaatgc actaagtaaa cgaatatgtg
      841 ttttctcatg tgagataaac cagataatga caaaggatat gttcacacca atcacataaa
      901 aaattaatat tttagagaat agtgccattt ttatgttctt cttatccttc ctggctactt
      961 gtaaaactga cggaaatagt catcaactgt cataatgttg aggtcaaaat caatatccgg
     1021 taagtctaag catttgagcc tgattaaatc ttcgatttca cttgcggcta atgatgtcgt
     1081 tattgcgaag gaattttcat tcaattgtcg tggtatccca tattcatcag ccacgataga
     1141 ggagaaattc atatcataca tcaatgatct taaccttaag aacactgagg aataagatga
     1201 tggataatca aaagaaacaa cataagtatt gaacttgttt ttaccttcca taatatgact
     1261 cctatcaata ttaaacgctc tggggacgca aaacttttta accccgattg atgattctca
     1321 tataggagat attctttttt ttgctcagta aaggggatga cttgagacaa aaaaacgcgc
     1381 tctctgccca ttctttgtcc atccccctac ccttcagatg ctctcctgca tcacatcgcg
     1441 gagagcatga aaaatatcgt gactctgtac tcttccatca actgcgaata tcatcatact
     1501 cccgcgtttt atcaaattcg tgtttcgcaa atggacataa tgggataatt tttcgttttt
     1561 cccgacgcat tttttccacg actttcgcaa ccagctgttt accaatcccc tgccctttca
     1621 ggctttcatc gacatcggta tgttcgataa tcgctaaatt ctctccggtc ggcacaaaga
     1681 caatttcagc gatttgcttg ccttattcgt cattaatgta aaaattattg tggccttcgc
     1741 gtatttccat tttaccctcg cttatttatg acggtatttc agcgcgccgc tcgggcacgt
     1801 atcaatcact ttaaccacag tggcgacgtc gacttcatcc ggcatgatcc acggctttcg
     1861 tttgagatta aataacttgc cgttgccacg tacgcaattg ccagaatgct gacatatcgc
     1921 agtgttgaaa tagacatcga tcttttcgcc ggtataacag cgataacccc cgtccagtag
     1981 cgcctgatcc atgaccttcc ctctctcatc agtatgatta tcgctataag catagccccg
     2041 gaatcttcat acagcactgg cagtttccgt tgccagagtc tcttccccta tatagccaat
     2101 cattcttact ccctttgaat tacccgcctc atcagagata atgcttaaga aatttgtcac
     2161 acaaggaagc tgatgagaca ttcattgccc taccgcatgt tacgcaaacg tccgatgaaa
     2221 ttgagtacca cagtgatctt aatggtcagt gcggtactgt tctcggtgct attggtggtg
     2281 catctgattt acttctcgca aatcagtgat atgacgcgag acgggctagc caacaaggca
     2341 ctggcagtgg cgcgtaccct cgccgactcg ccggaaatcc gtcagggctt gcagaaaaaa
     2401 ccgcaggaga gcggcatcca ggccatcgcg gaagccgtgc gcaaacgcaa cgatctgctg
     2461 tttattgtcg ttaccgatat gcaaagtctt cgctactcgc atcctgaagc ccagcgtatt
     2521 ggtcagccat ttaaaggtga tgacatcctt aaagcgctga atggcgaaga aaatgtcgct
     2581 atcaatcgcg gttttctggc gcaggcttta cgcgtattta cccccatcta cgatgaaaat
     2641 cataaacaaa ttggcgtggt ggcgatcggc cttgagttaa gccgtgtgac ccaacagatc
     2701 aatgacagtc gctggagcat tatctggtcg gtattatttg gcatgctggt cggactgatt
     2761 ggcacctgca ttctggttaa agtactgaaa aaaatccttt tcggcctgga accctacgaa
     2821 atctccacgc tgtttgagca gcgccaggcc atgttgcagt ccatcaaaga aggcgtcgtt
     2881 gccgtggacg atcgcggtga agtcacgctg atcaacgatg ccgcacaaga attgctgaat
     2941 taccgtaagt cgcaggacga tgagaaactg tcgacgctca gccactcatg gtcacaggtg
     3001 gtagatgtct cggaagtgtt acgcgacggt acgccgcgcc gcgacgaaga gattacgatt
     3061 aaagaccggc tattactgat caacaccgtt ccggtgcgca gtaatggcgt tatcatcggt
     3121 gccatttcaa ccttcaggga caaaaccgaa gtacgtaaac tgatgcagcg actcgacggt
     3181 ctggtcaact atgccgacgc acttcgtgaa cgatcccacg aatttatgaa taaattgcac
     3241 gtgattctcg gattattgca tctgaagagt tataagcagt tggaagatta cattctcaaa
     3301 acagccaata actatcagga agagattggc gctctgctgg gtaagatcaa atctccggtt
     3361 atcgctggtt ttttaatcag caagattaat cgcgcgaccg atttaggcca tacgctgatt
     3421 ttaaacagtg aaagccagtt gccagacagc ggcagtgagg accaggtcgc gacgctgatt
     3481 accacattgg gaaatctgat agaaaacgcg ctggaagcat tagggccgga acccggtggc
     3541 gaaattagcg taacattgca ctaccgtcac ggctggctgc actgcgaagt taacgatgat
     3601 ggaccgggga tcgcacccga caaaatcgat cacatttttg acaaaggtgt ctcgacaaaa
     3661 ggaagcgagc gaggcgtcgg tttagcactt gtcaaacaac aggtagaaaa tctcggcggc
     3721 agcatcgccg tggaatcgga acccgggatt ttcacacaat tttttgtcca gataccctgg
     3781 gacggggaga ggtcgaacag atgatcaatg tattaattat cgatgacgac gcaatggtcg
     3841 cggagctgaa tcgccgatac gtagcacaaa tcccaagctt tcaatgctgt ggaacagcct
     3901 cgacgctgga gaaagccaaa gagattatct tcaatagcga tacgcctatc gacctgatat
     3961 tgctcgatat ctatatgcaa aaagagaacg ggctcgattt actgcctgtc ctgcataacg
     4021 cgcgttgcaa aagtgatgtg attgtcatct cctccgcagc cgatgcggca accattaaag
     4081 attcgctgca ttacggtgtc gtggattacc tgatcaaacc cttccaggct tctcgctttg
     4141 aagaggcgct caccggctgg cggcaaaaga aaatggcgct ggaaaaacat cagtattatg
     4201 accaggccga gcttgatcag ctaatccacg gcagcagctc caacgaacag gatcctcgtc
     4261 gcttgccaaa aggcttaacg ccgcagacgt tacgcacgct gtgccagtgg attgacgcgc
     4321 atcaggacta tgagttttca accgacgagc tggctaacga ggttaacatc tcgcgtgttt
     4381 cctgccgtaa atacctcatc tggctggtca actgccacat cttgttcacc agtatccatt
     4441 atggcgtcac ggggcgtccg gtttaccgtt accgtattca gacagaacac tactcactac
     4501 tgaaacaata ttgccaataa cggatcgctg gttatctgta agtaataatt attaccgtaa
     4561 tgcaaaatac ccctggcaca agttacatcc ttcatcagta aaacttgtgc cagatcaaat
     4621 ataattatcc ctccatcatc gctaaaaatt aatatctctt caggtgaacg gtgtttttaa
     4681 tttcaaaacg ctaacaaaag ttaattaact atcatgtcac ccgcattatg tgtattttta
     4741 cccacaaatg ggtagatcag attaatcttt aaacctaatg atatctgccc tgagaacaaa
     4801 aaatagaccg ataaatatca ataagataac agcaaacaaa acattaacat ctgcgcagta
     4861 caaactataa acccatcgcc agagagtttt tctctctgaa aaagccgctt atcacagtgc
     4921 ataaatttgc cgctgcttta atcagccaat atttactgtg aggtatttgc taaagccggt
     4981 aacgaccaaa cggatattta gtcaggctct gaaaacagtt catacaaaac agaacgtgac
     5041 tgtgatctat tcagcaaaaa tttaaatagg attatcgcga gggttcacac atgttattta
     5101 ctatccaact tatcataata ctgatatgtc tgttttatgg tgccagaaag ggtggtatcg
     5161 cgctgggttt attaggcggt atcggtctgg tcattctggt cttcgtcttc caccttcagc
     5221 caggtaaacc accggttgat gtcatgctgg ttatcattgc ggtggtggcg gcatcggcga
     5281 ccttgcaagc ttcgggcggt cttgatgtca tgctgcaaat tgccgagaag ttgctgcgcc
     5341 gcaacccgaa atatgtctca attgtcgcgc cgtttgtgac ctgtacgctg accattcttt
     5401 gcggtacggg tcatgtggtt tacaccattc tgccgatcat ctacgacgtc gccattaaga
     5461 acaacatccg tccggaacgt ccgatggcgg caagttctat cggtgcacag atggggatta
     5521 tcgccagtcc ggtgtcggtt gcggtcgtgt ctctggttgc gatgctgggt aatgtcacct
     5581 ttgatggtcg ccatcttgag ttcctcgacc tgctggcaat caccattcca tcgacgttaa
     5641 tcggtatcct ggcgatcggt atcttcagct ggttccgtgg taaagatctg gataaagacg
     5701 aagagttcca gaaattcatc tccgtaccgg aaaaccgtga gtatgtttac ggtgataccg
     5761 cgacgctgct ggataaaaaa ctgccgaaaa gcaactggct ggcaatgtgg attttcctcg
     5821 gggcaatcgc tgtagtcgca cttcttggtg ctgattcgga cctgcgtcca tccttcggcg
     5881 gcaaaccgct gtcgatggta ctggttattc agatgtttat gctgctgacc ggggcgctga
     5941 ttattatcct gaccaaaacc aatcccgcgt ctatctcaaa aaacgaagtc ttccgttccg
     6001 gtatgatcgc catcgtggcg gtgtacggta tcgcatggat ggcagaaacc atgttcggtg
     6061 cgcatatgtc tgaaattcag ggcgtactgg gtgaaatggt gaaagagtat ccgtgggcgt
     6121 atgccattgt tctgctgctg gtttccaagt ttgtaaactc tcaggctgcg gcgctggcgg
     6181 cgattgttcc ggtcgcgctg gcgatcggcg ttgatccggc atacatcgtg gcttcagcac
     6241 cggcttgcta cggttattac atcctgccga cttatccgag cgatctggca gcgattcagt
     6301 ttgaccgttc cggcaccacc cacatcggtc gcttcgtcat caaccacagt tttattctgc
     6361 cggggttgat tggtgtgagc gtatcgtgcg tcttcggctg gatcttcgcc gcgatgtacg
     6421 ggttcttata aatgcacttt gcgtgccgcc cgtgactacg cggcacgcca ttttcgaata
     6481 acaaatacag agttacaggc tggaagctat gtcaaacaaa ccctttatct accaggcacc
     6541 tttcccgatg gggaaagaca ataccgaata ctatctactc acttccgatt acgttagcgt
     6601 tgccgacttc gacggcgaaa ccatcctgaa agtggaacca gaagccctga ccctgctggc
     6661 gcagcaagcc tttcacgacg cttctttcat gctccgtccg gcacaccaga aacaggttgc
     6721 ggctattctt cacgatccag aagccagcga aaacgacaag tacgtggcac tgcaattctt
     6781 aagaaactcc gaaatcgccg ccaaaggcgt gctgccgacc tgccaggata ccggcaccgc
     6841 gatcatcgtc ggtaaaaaag gccagcgcgt gtggaccggt ggcggtgatg aagaagcgct
     6901 gtcgaaaggc gtctataaca cctatatcga agataacctg cgctactcgc aaaacgcggc
     6961 gctggacatg tacaaagagg tcaacaccgg cactaacctg cctgcgcaaa tcgacctgta
     7021 cgcggtagat ggcgatgagt acaaattcct ttgcgttgcg aaaggcggcg gctctgccaa
     7081 caaaacgtat ctctaccagg aaaccaaagc cctgctgact cccggcaaac tgaaaaactt
     7141 cctcgtcgag aaaatgcgta ccctcggtac tgcagcctgc ccgccgtacc atatcgcgtt
     7201 tgtgattggc ggtacgtctg cggaaaccaa cctgaaaacc gtcaagttag caagcgctca
     7261 ctattacgat gaactgccga cggaagggaa cgaacatggt caggcgttcc gcgatgtcca
     7321 actggaacag gaactgctgg aagaggccca gaaactcggt cttggcgcgc agtttggcgg
     7381 taaatacttc gcgcacgaca ttcgcgttat ccgtctgcca cgtcacggcg catcctgccc
     7441 ggtcggcatg ggcgtctcct gctccgctga ccgtaacatt aaagcgaaaa tcaaccgcga
     7501 aggtatctgg atcgaaaaac tggaacaaaa cccaggccag tacattccgg aagaactgcg
     7561 ccaggccggt gaaggcgaag cggtgaaagt tgaccttaac cgcccgatga aagagatcct
     7621 cgcccagctt tcgcaatacc cggtatccac tcgtttgtcg ctcaccggca ccattatcgt
     7681 gggccgagat attgcacacg ccaagctgaa agagctgatt gacgccggta aagaacttcc
     7741 gcagtacatc aaagatcacc cgatctacta cgcgggtccg gcgaaaaccc ctgccggtta
     7801 tccatcaggt tcacttggcc caaccaccgc aggtcgtatg gactcctacg tggatctgct
     7861 gcaatcccac ggcggcagca tgatcatgct ggcgaaaggt aaccgcagtc agcaggttac
     7921 cgacgcgtgt cataaacacg gcggcttcta cctcggtagc atcggcggtc cggcggcggt
     7981 actggcgcag cagagcatca agcatctgga atgcgtcgct tatccggagc tgggtatgga
     8041 agctatctgg aaaatcgaag tagaagattt cccggcgttt atcctggtcg atgacaaagg
     8101 taacgacttc ttccagcaaa tcgtcaacaa acagtgcgcg aactgcacta agtaacctct
     8161 tcggcccagc gcctggcagc atgctgccag gtgatccccc tgggccacct cttttgcgat
     8221 tgtaatttca cgcttgctgg tgaatagtca gtattttccc tgacttgcga actcaccatg
     8281 acccgcacac tcaagccgtt aattcttaac accggcgcac tggcgctaac gttaatcctg
     8341 atttataccg gcatttcggc ccatgacaaa ctcacctggc tgatggaagt gacaccggtg
     8401 attattgtcg tgccgctact gcttgccacc gccagacgtt atccgttaac gccgctgctc
     8461 tatacgctca ttttctttca cgccatcatc ctgatggtcg gcggacaata cacctacgcg
     8521 aaagtccccg ttggttttga ggtgcaggaa tggctggggt tgagccgtaa tccgtatgac
     8581 aagctggggc actttttcca agggctggtg cctgcactgg tggcactaga aattctcgtt
     8641 cgcgggatgt acgtgcgcgg acgtaaaatg gtggcgttcc tggtctgctg cgtggcgctg
     8701 gcgataagcg caatgtatga attaatcgag tggtgggcgg cgctggcaat gggtcaggga
     8761 gcggatgatt ttctcggcac ccagggcgac cagtgggaca cgcaatccga tatgttctgc
     8821 gcgctgcttg gcgcattaac gacggtgata ttcctcgctc gctttcattg ccgccagcta
     8881 cggcgctttg gcttgataac cggataacaa cgtgcgcttt gttgatgccg gatgcggcgt
     8941 gaattcctta tccggtctac aaaatttgca aatccaaagc attgtattaa gacgtggcct
     9001 gataaacata tcgcatcagg ccattttcgt tagctattat ccacgtcagg ctttcacatc
     9061 actcactgca ccgaccggaa tatcagcatg aacaggctcg ggcggtactt tgcgatattt
     9121 atccagcaga tggatctgga tcctgcgcag cgtgtcacca ttgaggcgat agaaacggaa
     9181 gtagagaatc agcgttacca tgaaaaacag agttggtaga gcaatcataa taaactgcat
     9241 acctaatagg gcttgcgtag actgttcaac attcggtaca tagccaatca tccctaacac
     9301 aaccgcaatg aaaaaagccg caaaggctga accgcccttc accaccatag tctgcacgga
     9361 gtaagcgatg ctttcacagc gtacgtgcag tttatattca ccgtaatcaa cggtatctgc
     9421 caccatgatg acctgtaata cccagaaaag cgccgttccc acattcaaca aaatacccgc
     9481 aatcacaatg aggacaacgt tgtgatagct cattaatgcc attaacagga gaacaccaca
     9541 gcttaacacc ggaagaatag atgctccggc ccataaaatg cgtcgggata atgatttaac
     9601 taagcgtggg aagaatacta acgtcaccag gttagcagct cccgcatacg acagataata
     9661 ggggaacaaa tccgcatcac cgataacata tgagaaataa tagatagcaa atccggtaat
     9721 aatgttgctg gctacattat aagcaagagc catacccaag aggcatgaaa gctgatcgtt
     9781 tttataaatt agcgcaacga tggctttaag tgtcagatgg cttccttcag cagacggttg
     9841 attgtctgac gaaaagactt catgcacatt gcgcagagtg atgatggttg aaacaataaa
     9901 aaaggcgatc agtaccagag tgaacatctg aaagccaaat ccccgatcgc caccgccgac
     9961 ataattaaca aatggtagcg tcacacctgc cgtaacaaag cctaccagac tggcaaaaaa
    10021 acgcggataa ggaaccagtt gttcgcgctc acgtttatcg agcgtgatgg ttggaaccag
    10081 cgaccagaag ggaatatcca taatggtgta agtcatgccc cagaggatgt aggtcacgca
    10141 aacaaagaca atctgagtag taccttcaaa cagatgcgca ctaaagagga gaaataagat
    10201 tacagagttt gccaacgtac cgatcaggat ccagggtttg aacttacccc atcgcgatcg
    10261 cgtagcattt acaatccatc ccataatcgg atcgttaata gcatcccaga tcctcgccac
    10321 cagaaacaaa gtaccgacca aacccacaga cagcccgacg acatcggtgt agtaatacat
    10381 gaggtacata tacacaatgc cgatcgcaaa atccttcccg aacgctccaa atccataact
    10441 gagttttgta gtcattgaaa tgctcatagg gtatcgggtc gctgttacca acgcccgcct
    10501 tctgttattg gtatcgtcag aggtgtgcgc cggaataaat cccccggcgc agtagcgttt
    10561 agtcgcgttt taacggtgca accagcctgg cagccagtcg ccgtgggcgg caatcaggtc
    10621 gtcaacaaga gcatatattt cgtcaatgcc cagcacggcg gcagtatgcg ggtccatcat
    10681 cgcggcatgg taaacacggt cgcgattttc cgtaagaata gcttcggtca gcagcgtctg
    10741 tacgttgatg ttggtttgca tcagggcggc cagatgcgaa ggtagcgtac cgactttggt
    10801 tggctgaatg ccattagcat caaccagaca ggctacttcc acgcaacatc cttgtggcag
    10861 gttatcaatc aaaccatcgt tacggacgtt gccgtaaatc acactcggct cgccagtcca
    10921 gatagcgttc atgattgtgc tggcatattc ccgtgacggt ttaatatcaa tccgggaggc
    10981 gtttttatac tcctccagct ctttatgcca gttcgccagc tgctcgacgc agcgtttcgg
    11041 gtactcatcc agcggtactt tataacgctc aatcaaatcc tcacgacctg gcttaataaa
    11101 ccacggcgta tattcggcaa aatgttctga cgattccgtg acgaagtagc ccagcttttt
    11161 gaacatttcg tagcgcacaa tattctggca gcgagtatta ccatgaatat ttggcttcgg
    11221 tgcctgccct gcttcataag ccgccagcag ttccgggtag agattcacgt aactgccgtc
    11281 ggcggttttg cgctccagct ccaggtaaaa cgccatatgg ttgatacctg cgcaacggta
    11341 acgcagcgta gccgggtcga tattgaggtc acgcgccagc tcttccgccg ttccctgcac
    11401 cgaatggcac agcccgacct gtttgatatg cggatagcgg gcatacatcg cccaggtatt
    11461 catcgccatt gggttaacat agttgagcat ggtggcatcg gggcagactt ccgtcatgtc
    11521 ctcgcaaatt tgccacagat gcggaatggt acgtagcgcg cgcataatac cgcccggccc
    11581 caacgtatcg gcaatggttt gttccagacc atgccgctta cagacctcga aatcagtcac
    11641 cgtgcaaggt tcataaccgc caatctgaaa tgccaccacg acaaaatcgg catcctctaa
    11701 ggcttctttc tgttgggtgt ggcaggtgat tttgccgctg gcccctgctg aatccatcag
    11761 cttacgcacc acaatatgcg actcttccag gcgggtgggg tcaatgtcca tcagggcaat
    11821 atgcgccgtt ttcagcgcct cgcgatggaa cacatcacca agaatatttt taacgaaaat
    11881 cgtcgaacca gcgccgataa atgtaatttt gggtgcagac atcatgcaga tctcctggct
    11941 tgcttgaata acttcatcat ggcaggcgaa tctgcagaaa acctccggct tccaggttga
    12001 gcattcccat aaactcagat cctgcgtgaa gcagcagtaa atcttagttt atgggaataa
    12061 attacctgaa aagtagagtt ttcggcctca tgatgctcgg acagtcccct cgcccctctg
    12121 ggaagagggt gaaaaccgtg ctcccactcg cagtcatcct ccctcactcc tgccataatt
    12181 ctgatattct aggaaagaga gccatccatg aatacagata cgtttatgtg cagcagcgac
    12241 gaaaaacaga cccgcagccc gctgtcgctg tattcggaat accagcggat ggagattgag
    12301 tttcgcgcac cgcatatcat gcccaccagc cactggcatg gtcaggtcga agtgaatgtg
    12361 cctttcgatg gcgatgtgga atacctgatc aacaatgaaa aagtgaatat caatcagggt
    12421 catatcacgc tgttctgggc ctgtacaccg caccaactaa cagataccgg aacctgtcag
    12481 agcatggcga tttttaatct gccgatgcat ctgtttctct cctggccact ggataaagac
    12541 ctgattaacc acgtcactca cggcatggtg atcaaatcac ttgccacaca gcaacttagc
    12601 ccgtttgaag tacgccgctg gcagcaggaa ttaaacagtc cgaatgagca aattcgccag
    12661 ctcgccattg atgaaattgg cctgatgctc aagcgattta gcctctctgg ctgggaaccg
    12721 attctggtca ataaaacctc gcgcacacac aaaaacagcg tctcgcgcca tgcgcaattt
    12781 tatgttagcc agatgctggg ctttattgcc gaaaactatg atcaggcgct gaccatcaac
    12841 gatgtggctg agcacgtcaa acttaacgcc aactatgcaa tggggatatt ccagcgggtc
    12901 atgcaattga cgatgaaaca gtacattacc gcgatgcgca tcaaccacgt tcgcgcgtta
    12961 ctgagcgata ccgataaaag tattctcgat attgccctga cggcaggctt tcgttcaagt
    13021 agtcgttttt acagcacgtt cggcaaatat gtcggcatgt cgccgcaaca ataccgcaaa
    13081 cttagccaac agcgccgcca gacgtttccc ggctaaagac gatatcagta tcagccaaaa
    13141 aaatagttta gccgtcgata ataagcagtg aaaataattt aaaataatca cataacgtat
    13201 tgtttataaa actaaatatt tcaaaaatgt ttgtttttca cgcgctttac agcccgaaaa
    13261 ggccggaaga tacttgcccg caacgaagat tccttcataa ccgggtaagc aatgatgaaa
    13321 gtattaattg ttgaaagcga gtttctccat caagacacct gggtcggtaa cgccgttgag
    13381 cgtctggcag atgctttaag ccagcaaaat gttaccgtga ttaaatccac ctcctttgat
    13441 gatggttttg ccattctctc ttcaaacgaa gccattgact gcctgatgtt cagctatcaa
    13501 atggaacatc cggacgaaca tcaaaacgtc agacaattga tcggtaagct tcatgagcgc
    13561 caacaaaacg tgccggtctt cctgttgggc gatcgggaaa aagccctcgc cgcaatggac
    13621 cgggatctgc tggagcttgt cgatgaattc gcctggattc tggaagatac cgccgacttt
    13681 atcgccggac gcgccgttgc cgcgatgacc cgctaccgcc agcagctgtt gccgccactg
    13741 ttcagcgcgc tgatgaaata tagcgacatc catgaatatt cctgggcagc gccaggccac
    13801 cagggcggcg ttggttttac caaaataccc gccggacgtt tctaccatga ctactatggt
    13861 gaaaatctgt tccgcaccga catgggcatc gaacgaactt ccctcggttc tttgcttgcc
    13921 catactggcg catttggcga aagcgaaaaa tatgccgcac gcgtatttgg tgccgatcgc
    13981 tcctggtcgg tagtcgtcgg tacttccggc tctaaccgca ccatcatgca ggcttgcatg
    14041 accgataacg atgtcgtggt cgttgaccgt aattgccata aatccatcga acaaggcttg
    14101 atgctgacag gcgcgaaacc agtctacatg gtgccaagcc gcaaccgcta cggcattatc
    14161 gggccaatct atccgcagga aatgcaacct gaaaccttgc agaagaaaat cagtgaaagc
    14221 ccgctgacca aagacaaagc cgggcaaaaa ccgtcttact gcgtggtgac caactgcacc
    14281 tatgacggcg tgtgttataa cgctaaagaa gcgcaggatc tgctggaaaa aacctccgat
    14341 cgtctgcact ttgacgaagc ctggtacggc tatgcacgtt tcaacccgat ctatgccgat
    14401 cactatgcca tgcgcggcga acctggcgat cacaacggtc ctaccgtttt cgccacccac
    14461 tccacccaca aactgctgaa tgcgctgtca caggcttctt atattcatgt acgtgaaggt
    14521 cgtggggcga ttaacttctc ccgcttcaac caggcctaca tgatgcatgc caccacctcc
    14581 ccgctgtatg ccatctgcgc atccaacgac gtggtggtgt cgatgatgga cggcaacagc
    14641 ggcctgtcac tgacacagga agtgattgac gaagcggttg attttcgtca ggcgatggcg
    14701 cggctatata aagagttcac cgctgacggt agctggttct tcaaaccgtg gaacaaagaa
    14761 gtcgtcaccg acccacaaac cggcaaaacc tatgactttg ctgacgcacc aaccaaactg
    14821 ctgaccaccg ttcaggactg ctgggtaatg catccgggcg aaagctggca cggcttcaaa
    14881 gatattccgg ataactggag tatgctcgac ccgattaaag tcagcatcct tgctccggga
    14941 atgggtgaag atggtgaact ggaagaaacc ggtgttccgg cggcgctggt cactgcctgc
    15001 cttggtcgcc acggcattgt gcctacccgc accactgact tccaaattat gttcctgttc
    15061 tctatgggcg taacccgtgg gaaatggggg actctggtta acaccctttg ctccttcaaa
    15121 cgccactatg acgccaacac accgctggcg caggtgatgc cggaacttgt tgaacaatat
    15181 cctgacactt acgcgaacat gggaattcac gatctgggtg acaccatgtt tgcctggctg
    15241 aaagaaaaca accctggcgc acggttgaac gaagcctatt ccggcctgcc ggtggcggaa
    15301 atcaccccgc gtgaagcgta caacgcgatt gtcgacaaca atgtcgaact ggtatccatt
    15361 gaaaatctgc caggacgcat cgcggcaaac tcagttatcc cgtatccgcc aggaatcccg
    15421 atactgctgt ctggtgaaaa cttcggcgat aaaaacagtc cgcaagtaag ttatttacgc
    15481 tcgctgcaat cctgggacca ccatttccct ggatttgaac acgaaactga agggactgaa
    15541 attattgacg gtatttacca cgttatgtgt gtgaaagcgt aaccactatt ccgctgaagg
    15601 cgtaattgtt taaataacat tacgccgcct ggccttaggc cttttgagta tggcaacgtt
    15661 ttcataaaaa ttgctgcaaa caaaaatgtc atactttttg cgcggcccca ccccgcgctt
    15721 ttttttgcct gttatttatc ctgtaaaaaa atatgtacat gagaaattac tataaaaatt
    15781 tgtaatatta gtaaaactcg ttatttttat gcatgtttat attcatcata caattatata
    15841 accatttccc ggtatcgctt tgctttagcg agaactggtc ttttattcgc actcaggagt
    15901 acatgtatga ggatttgcag cgaccaacct tgtattgttt tattgactga aaaagatgtc
    15961 tggataaggg tgaatgggaa agaacctatt agccttaaag ctaaccatat ggcgttatta
    16021 aattgtgaaa ataatattat cgacgtctcc tctcttaaca acactttggt tgctcatatt
    16081 agtcacgaca tcatcaaaga ttacctccgg tttctgaata aagatctctc gcaaatacca
    16141 gtatggcaac gtagtgctac gcccatactc accctgccat gcctgacgcc agacgtcttt
    16201 cgcgttgccg cgcaacacag catgatgccc gcagaaactg agtcagaaaa ggaacgaaca
    16261 cgcgcattat tattcacggt gctatcccgt tttctcgaca gtaaaaaatt cctttcatta
    16321 atgatgtata tgttacgtaa ttgtgtaagt gacaacgttt atcaaattat tgaaagcgat
    16381 attcacaaag actggaatct tagtatggta gccagttgtt tatgtcttag cccaagtctg
    16441 ttaaagaaaa agctgaaaag cgaaaacacc agttatagcc aaataatcac cacctgccgc
    16501 atgcgttatg ccgtaaatga attaatgatg gacggtaaaa atatctctca ggtatcacag
    16561 tcctgcggct acaacagtac gtcgtacttt atttctgtct ttaaagactt ctacggtatg
    16621 acgccgctgc attatgttag tcagcacaga gaacgcactg tcgcctgatt tttaacctta
    16681 acgaagagct atattaataa cggcatcagc gataacccgg tcgataataa ttcaactatc
    16741 gaatgcaggc gtatgatatg acgtaattta ttgtcacgaa gctcgccttc gcaggagttt
    16801 aattatgtct tcggatgctg atgctcacaa agtgggctta atccccgtcc ccctgatggt
    16861 gtcggggaat attatggggt caggtgtttt tctgttacct gcaaacctgg cctccactgg
    16921 cgggattgcc atttatggat ggttggtgac gattatcggt acgctggggc tctcgatggt
    16981 atacgccaaa atgtcgttcc tcgacccaag tcctggtggt tcttacgctt acgcccgccg
    17041 ctgctttggc ccgtttctcg gttatcaaac caacgtcctc tactggctgg cctgctggat
    17101 cggcaatatc gccatggtgg tcattggcgt aggatattta agttacttct tcccgattct
    17161 gaaagatcca ttggtattaa ccatcacctg cgtcgtggtg ctgtggatct tcgtcctgct
    17221 gaacattgtc ggtccgaaaa tgatcacccg tgtgcaggca gttgccactg tgctggcgct
    17281 gatccccatc gtcgggattg ccgtatttgg ctggttctgg ttccgtggtg aaacctatat
    17341 ggcggcatgg aacgtcagcg gcctgggcac cttcggtgca attcaaagta cccttaacgt
    17401 tacgctgtgg tcgttcatcg gtgtggaaag tgcctccgtt gccgcaggtg tggtgaaaaa
    17461 cccgaaacgc aatgtcccta tcgccaccat tggtggggta ttgattgccg ccgtttgcta
    17521 tgtactttct accaccgcga ttatggggat gatccctaat gccgcactgc gcgtttctgc
    17581 ttcgccattc ggtgatgccg cacggatggc gttgggtgac accgccgggg ccattgtttc
    17641 cttctgcgca gctgcgggtt gcttaggttc actgggcggc tggacgttgc tggcgggtca
    17701 aacggcgaaa gccgctgccg atgacggact gttcccaccg atttttgccc gtataaataa
    17761 agcgggtacg ccagtggcgg ggctgattat cgtcggtatt ttgatgacca tcttccagct
    17821 cagtagcatt tcgccaaacg caaccaaaga gttcggtctg gtttcttccg tgtcggtcat
    17881 ctttacactg gtgccatatc tttacacctg tgcggcgtta ctgctgctcg gccacggcca
    17941 ctttggtaaa gcacgcccgg catatctggc tgttactacc attgccttca tctactgcat
    18001 ttgggccgtg gtggggtccg gggcgaaaga ggttatgtgg tcatttgtca ccctgatggt
    18061 catcaccgcc atgtatgcgc tgaattacaa ccggctacat aaaaacccgt atcccttaga
    18121 tgcaccaata agcaaagatt aattcccctt aatccagcaa acataaaagc caaccttaag
    18181 aacttaaggt tggcttaatt ttgctttgcg agcatatgcg cactttgttc gatggaaaca
    18241 ccgtgatgtt gaagcgccta ctaaaaagac cctctttgaa tttactcgcc tggctattgt
    18301 tggccgcttt ttatatctct atctgcctga atattgcctt ttttaaacag gtgttgcagg
    18361 cgctgccgct ggattcgctg cataacgtac tggttttctt gtcgatgccg gtcgtcgctt
    18421 tcagcgtgat taatattgtc ctgacactaa gctctttctt atggcttaat cgaccactgg
    18481 cctgcctgtt tattctggtt ggcgcggctg cacaatattt cataatgact tacggcatcg
    18541 tcatcgaccg ctcgatgatt gccaatatta ttgataccac tccggcagaa agttatgcgc
    18601 tgatgacacc gcaaatgtta ttaacgctgg gattcagcgg cgtgcttgct gcgctgattg
    18661 cctgctggat aaaaatcaaa cctgccacct cgcgtctgcg cagtgttctt ttccgtggag
    18721 ccaatattct ggtttctgta ctactgattt tgctggtcgc ctcactgttt tataaagact
    18781 acgcctcgtt gttccgcaat aacaaagagc tggtgaaatc cttaagcccc tctaacagca
    18841 ttgttgccag ctggtcatgg tactcccatc agcgactggc aaatctaccg ctggtgcgaa
    18901 ttggtgaaga cgcccaccgc aacccgttaa tgcagaacga aaaacgtaaa aatttgacca
    18961 tcctgattgt cggcgaaacc tcgcgggcgg agaacttctc cctcaacggc tacccgcgtg
    19021 aaactaaccc gcggctggcg aaagataacg tggtctattt ccctaatacc gcatcttgcg
    19081 gcacggcaac ggcagtttca gtaccgtgca tgctctcgga tatgccgcgt gagcattaca
    19141 aagaagagct ggcacagcac caagaaggcg tgctggatat cattcagcga gcgggcatca
    19201 acgtgctgtg gaatgacaac gatggcggct gtaaaggtgc ctgcgaccgc gtgcctcacc
    19261 agaacgtcac cgcgctgaat ctgcctggtc agtgcatcaa cggcgaatgc tatgacgaag
    19321 tgctgttcca cgggctggaa gagtacatca ataacctgca gggtgatggc gtgattgtct
    19381 tacacaccat cggcagccac ggtccgacct attacaaccg ctatccgccg cagttcagga
    19441 aatttacccc aacctgcgac accaatgaga tccagacctg taccaaagag caactggtga
    19501 acacttacga caacacgctg gtttacgtcg actatattgt tgataaagcg attaatctgc
    19561 tgaaagaaca tcaggataaa tttaccacca gcctggttta tctttctgac cacggtgaat
    19621 cgttaggtga aaatggcatc tatctgcacg gtctgcctta tgccatcgcc ccggatagcc
    19681 aaaaacaggt gccgatgctg ctgtggctgt cggaggatta tcaaaaacgg tatcaggttg
    19741 accagaactg cctgcaaaaa caggcgcaaa cgcaacacta ttcacaagac aatttattct
    19801 ccacgctatt gggattaact ggcgttgaga cgaagtatta ccaggctgcg gatgatattc
    19861 tgcaaacttg caggagagtg agtgaatgaa aattctgatt gttgaagacg atacgctgtt
    19921 attgcaggga ctgattctgg cggcgcaaac cgaaggctac gcgtgcgatg gcgtgacaac
    19981 cgcgcggatg gcggaacaaa gccttgaggc tggtcattac agcctggtgg tactggattt
    20041 agggttaccc gacgaagatg gactgcattt tctcgcccgt atccgcgccc tgctacgacg
    20101 ccataataat cagggcgaaa gtgagctgat tgttggcaat ctgacgctga atatgggtcg
    20161 ccgtcaggta tggatgggcg gtgaagagtt gattctgacg cccaaagaat atgctctgct
    20221 gtcacgatta atgctcaaag caggcagtcc ggtgcatcgg gaaattctct acaacgacat
    20281 ctataactgg gacaatgaac cctcgaccaa caccctggaa gtgcatatcc acaatctgcg
    20341 cgacaaagtg ggcaaagccc gtatccgcac cgtgcgcggc tttggctata tgctggtcgc
    20401 gaatgaggaa aactaattga atctgatgcg ttttctgcgc cgaccaatat cgctgcgcca
    20461 acggctgata ttgactatcg gggccatttt gttggtgttt gagctgatca gcgtcttctg
    20521 gctatggcat gaaagtaccg agcagattca gctgtttgag caggcgctac gcgacaatcg
    20581 caacaacgat cgccacatca tgcgtgagat ccgcgaggcg gtcgccagcc tgattgtccc
    20641 cggcgtcttt atggtcagcc tgacgctatt tatctgctat caggcggtac gccgcatcac
    20701 ccgcccgctg gcggagctgc aaaaagagct ggaagcgcgc actgccgaca acttaacgcc
    20761 cattgccatt cacagcgcca ccctcgaaat cgaagcggtg gtttcggcgt taaacgatct
    20821 ggtcagtcgc ctgaccagca cgctggataa cgaaaggttg tttaccgctg acgtcgcgca
    20881 cgaactgcga acgccactgg cgggggtgcg tttgcatctg gaactgctgg cgaaaacgca
    20941 tcacattgat gtagcaccgt tagtggcacg gcttgatcag atgatggaga gcgtctccca
    21001 actgctgcaa ctggcgcgtg ccggacagtc attttcttcc ggtaattatc aacatgtaaa
    21061 actgctggaa gatgtcattc tcccctcgta tgacgaactc agtaccatgc tcgaccagcg
    21121 acagcaaacc ctgctattgc cagagagcgc cgccgacatc accgttcagg gtgatgcaac
    21181 cctgctgcgg atgttattgc gaaacctggt agaaaacgcc catcgttaca gcccacaagg
    21241 cagcaacatt atgattaagc tgcaagaaga tggcggagcg gtcatggccg ttgaagatga
    21301 aggaccgggt attgatgaga gtaaatgcgg ggagttgagt aaagcatttg tacgtatgga
    21361 cagccgttat ggcgggattg gtctggggtt aagtattgtc agccgcatta cacagttgca
    21421 tcacgggcag tttttcctgc aaaaccggca agagacttcc ggcacgcggg cctgggtacg
    21481 gctgaagaaa gatcagaacg tggcaaacca gatataaaga aagctgctga ccaccagcac
    21541 gctgaacacg gtagttaaac tttcataaac acggtttttc attgcactct cctccgttaa
    21601 cctggaggag agtatgcgcg tcagagatta agtgaacctt aagagttcaa ttggcctgat
    21661 aagacagcgt tacatcaggc catccgtttc agcttattca tcaattcgcg gatgttgctg
    21721 taccaggcgg gtacgtttcg cctgcaaatc ggcaatctcg tggtcaatat catcgatttt
    21781 ctgctcgata ttatcgtaat gctcgacgag aatttccttc gcttcctgta tatctgacgc
    21841 cgctggtgtc gcacctttca acggacgatt tgccgtctct ttcatggtta cgccggtgat
    21901 taaaccaatc accgccacta ccatcaggta ataggcaggc atcatcagat tctgcgagct
    21961 ttcgaccagc caggccgcca gtgttggcgt cagaccggca accagcaccg aaatattaaa
    22021 tgccgccgcc agcgcgctgt aacggatatg cgtcgggaac atcgctggca aggtagaagc
    22081 cataacgccc gtaaagcagt taaggatcac cgccagcatc agtaacccgg caaaaatcag
    22141 gccgatgacg ttactgttaa tcagaataaa cgccgggatc gccaacacaa acagggcaac
    22201 actaccaagt agcacaaacg gacgacggcc aaaacggtca ctcagcaagc ccatcaccgg
    22261 ctggacaaac agcataccga tcataatggc gataataatc agcaccccgt ggtcttcgga
    22321 gtaatgcagg ttatgcgaca aataactcgg catataggtc agcaacatgt agtaagtcac
    22381 gttggtggca attaccagac caatacatgt caacaggctg cgccagtgtt tggtggcaat
    22441 ctctttaaac gagactttcg ggccatcctg caaaccttcg cggtcgccct gttccagttt
    22501 atcaacatgc tgctggaacg ctggggtctc ttccagcgca tggcgcaggt aaagcccgat
    22561 aatccctaac ggcagagcaa taaagaacgg aatacgccag ccccagtcga ggaagttcgc
    22621 ttcgccgaca atggtcgaaa ttaacaccac cacgcccgca cccagcacaa acccggcaat
    22681 agaaccgaag tccagccagc tgcccataaa gccacgttta cggtcaggtg agtattccgc
    22741 aacaaatatc gacgccccgg tatattcacc gccgaccgag aaaccttgtg ccatcttaca
    22801 gatcaacagc agaatcggtg cccaaatacc aatcgtgtcg taggacggta ttaagccaat
    22861 acagaacgaa ctgatcgaca taatcacaat agtgatagcg aggatcttct ggcgaccata
    22921 tttatcgccc aacataccaa agaagagccc gccaagcggt cgaatcagaa agggaacgga
    22981 gaaagtggca agagcagcaa ccatctgcac gctggggtca gcccccggga aaaaaacttt
    23041 acctaatgcg taagcaacaa aaccataaac accaaaatca aaccattcca ttgcattacc
    23101 cagtgatgct gcggtaatgg ctttacgcag tttaccgtca tcaataatgg tgacatcacg
    23161 aagggtaatt ggttttactt ttttcctttt cagcatagct ttcctcgcag agttggccca
    23221 tttccgcaaa cgccagaaaa atcagcgcga cggccgcaaa aggggagcgg gaattgcagg
    23281 atgcaatctc tgtaacaagc gtagcgggtt tgcttacacc ctccggttaa ggaatgtaca
    23341 atcaaaccag ttgacgcctg aattgggcag ttagtgacct ttttacccta ccagtgttta
    23401 aatttgtgat caacttcaca catggatttc gtttaggact cattgatgta actgattatt
    23461 tacgccaaat ttacagagaa gatttcctcg accattgccc ccaccaaacg ctgcgctgaa
    23521 cagagtcgtg gcatccccag cgcgacagtt tgccagcgtt gggtcactga ccagcaaacg
    23581 ggttgtttat ctgccgtggt ccactttccc agccaactta aaaaatcagc atgatccccg
    23641 cccgtcggaa cggtcgaaga ggcaaaccac tgatggtaat agtgacgcgt ggtcggggcc
    23701 gcattgatac tctctgccag atgttgtgtc gctttcacgc gcaaatcacc cagcaacaac
    23761 gccaccgctt gcgggcttcc cagacgacag gcatcgccaa atgcccccca acgcaactct
    23821 tcgagaacga taaaacagcg cccaggcaac ggccaggcgt tatacgcccc agcacgccag
    23881 cgggtaaaaa tttgctcgct ctgttcaccc gcctgcacca gtaggcctcg ttgcgttaac
    23941 gccttttcct tccagcgaca acgggctgaa aaccactcat acaaggcggc aatttgctgg
    24001 gggagctccg ggaaagcaga gtgctggcgg tgatccattt tttgtaacag cgccagatgt
    24061 tgcgcgatct gcgtcagcgc cagatgaccg ggatccagca tcgacgccag tttttccacc
    24121 aatgtcagac gcaggctaag cggcgcattt aacatgccgc cgttcgtcca tgtctgaagc
    24181 tgcacacgcg aaagaagttc ctgcatcagt cgttcacgaa actgctgctg atgggcttgt
    24241 ggaaggcggg catcatcacc ctgcgccaga tccactaaaa agcggggata aaccgactcc
    24301 agcacgcgac cggggccgtc aagtaacgtc ttggtcaata tcgttctgcc gtgaaaagtg
    24361 tttgaatatc atcgcgtaac agctgggcgt cagtgtaaat ccagccgtga gtcatcacag
    24421 tctgctgcaa ttgctgctgc atcagcctga ccaccgattc attttgttga cgcagagcca
    24481 gactttcgcg taaacgcgtc tgtaattccg tcaaacatga agcaaactca gcgaaaaaag
    24541 tattcatgcc tgccgtaaca gattcatcga cctgctctgc cagaacttta gccatttgtt
    24601 ggcaatagag atcgacttct gcgcttaatg ctcgttgcaa cacactgtaa tcaaccgttt
    24661 ctgtcgggga tttctcattt ccccgtcccc agtcgggttg attaaaccag cgcgaaaaag
    24721 tctcacgcac aacgcctaaa cgcgtgctct gctcgtccgt tgcttcctgg cgcgaaatga
    24781 cttcactgaa cagctggcga gtattgaagt ggggaactgc gccgtgaaaa acaggaaaat
    24841 gaaacccagg acgaaaccct gactcgctca attccatttt gacttgttgc tcaatggggc
    24901 gaataacatc ggttaacacc cggcaaaggg tggattccag ctcggcaaaa cgcagcgtaa
    24961 agtcgcgact gatggtgttc tgcgccgtct gtaacagtgt ctcacagcgg gtacgaatct
    25021 cgcttaacgg ctccgaatca tcctgaaaca aggcggctaa ctgcgcattc accgcatctt
    25081 gctgttgacg cagaaagtgg ttggcggagg tcagggccag ctcgatttca tgtttaatct
    25141 cgccgctcac ctgcgcctga ttgagttgca atagctgcaa actttcttcg acctgatgga
    25201 tattttgccg caattgttca caagcgacgt ttaacccgtg cgcacgaaaa tccaggtatt
    25261 cccgcgcctg ctgcgcgtaa ttcaacagtt tatgcgcagc agatcgcaga gcatacaatg
    25321 aggcgttagc gtaagcggca tgaagcaacg cctgaattgg ctgggcgaac agcgaatctt
    25381 cccacaactg atcggcagca tgacgaatat gttcgaggtc cgccagatcg gcatgacgcc
    25441 agcgcctgcc gagcgcggca tgggcaaaat cttccaccca gcgttgttgc tctggcgctg
    25501 gtaacttacc gttgttggct aactcatagc gcgcccgatt cgccaggtag ccccacatcg
    25561 acgacaccgg aaatatctgt tgtggcgtaa tacagccttt catcagcgtc ccggaaatca
    25621 gtgcccgcac ctggtcggcg tcgtcactgt tacgatccgg ttgatcgaac ttattgacca
    25681 gcacatacag cgacaccgat tgccccaccg ccaaaatcgc ctcacggacc tcttcatcgg
    25741 agatcgattt cagttgcgta taatccagca ccgccagtac cgccgaggcg cgtgccagct
    25801 actggttaag cattttttgc agatgcggtt gcccggcttc atttggcccg ggggtatcca
    25861 gtaaactgac cgggataact ttccagcccc gccagatgga caaactccac ttcaatcacg
    25921 ggaatatgct caatggcggc gtaagcagaa aaaggaaaat cgacgtccag cgccttcgcc
    25981 agtcgtacta aatcattcaa acttttcaga caatcaaaaa taggctgggc acccagataa
    26041 tatttttcga aagcgacgcc attttcgatc cgctgcataa gcgcacgcat atctttatct
    26101 atttccagca catcggtcag atgcttaata tcgcaatcac gcaggcgctg gtgtaatttt
    26161 tgaattaaac aatcgattgg cgcgacatgt gaaaaatgca gtaccggttc cttttgcccg
    26221 ggcgtatggc gaataagcgt cggcagcgca gtcattgggc gattacgatt aggcagaacc
    26281 tccgtaccaa caatggcatt aatggtggtt gatttccctg ctttcatggt accgacaatt
    26341 gccagcacca tttccagtcg ggaaatttta cgcaactcat tattcagcat cgcgtgacgt
    26401 tcggcgatat taggctgact ccagggtaaa gcccgttgtg gcgcatcgtc tccgggtaca
    26461 gagagaggca ttttttccag taactgcaac tgttggcgag aaagctgtaa caggcgttca
    26521 gcctcctgac ttaactcata cagggtctgt gtgtacatag aaaattcttc cttaaagcaa
    26581 attttgttac ttttatttag ccagattgtt tttgagttct gttttcggct tttataatta
    26641 ctgcaagaaa taattttata tttagtgtgt tgttttttat cagaataaat aacgtcttct
    26701 gatacgttta aaacgtcaga aagataaaaa tatcatgtga ataaaaaaaa gaacaagtag
    26761 agcattaaca ttatcttaaa taataaatag aggcaaaaag attattttct ttttgcgttt
    26821 cctttcaaat gaaaacgatc gtcgtctaaa atcagcagta cccccgacaa actcagggat
    26881 tttgtgtata attgcggcct ttttcggcaa tctgccgttt tttggcgctt ttgccctgct
    26941 gacttttgag gaaatccaca tgtcattacc acactgccca aaatgcaact ccgaatacac
    27001 ctacgaagat aacggcatgt acatctgccc ggaatgtgcc tacgaatgga acgacgcaga
    27061 acctgcacag gaaagcgacg agctgatcgt taaagatgct aacggcaatc tgctggctga
    27121 cggcgacagc gttaccatca ttaaagatct gaaggtgaaa ggtagctctt cgatgctgaa
    27181 aattggcacc aaagtgaaaa acatccgcct ggttgaaggc gaccataaca tcgattgcaa
    27241 aatcgacggt tttggtccga tgaaactgaa atctgagttt gtgaaaaaga actgattgta
    27301 ttgtgatcgg taagccggat aaggcgctcg cgccgcatcc ggcaacgatg ccgactgcct
    27361 gatgcgacgc tgaccgcgtc ttatcaggct tccctctcat ctgtataaat ttcgaactac
    27421 acttaactgg cttctcttaa ctgaggtcac catcatgccg ttaagtccct acctctcttt
    27481 tgccggtaac tgtgccgacg caattgctta ttatcaacgt acgttgggcg ctgaactgct
    27541 ctataaaatc agcttcggcg aaatgccaaa atcagcgcag gacagcgccg agaacagccc
    27601 ttccggaatg caatttcccg ataccgccat cgcacacgcc aatgtgcgca ttgccggaag
    27661 cgacatcatg atgagcgatg ctataccgtc aggaaaagcc agctactccg gctttacgct
    27721 ggtgctcgat tcgcaacagg tcgaagaagg aaaacgctgg tttgacaatc ttgccgctaa
    27781 cggaaaaatc gaaatggcct ggcaggaaac tttctgggcg catggctttg gcaaagtcac
    27841 cgataaattt gacgtaccgt ggatgattaa tgtcgtcaaa caacaaccaa cgcaataatc
    27901 cgccgggagg cccgccctcc cgcactgtca tcgaattccc gttaactctt catctattag
    27961 tcacttttca ttaaccaaac cgtcacaata atccgccacg atggagccac ttttttaggg
    28021 aggctccagc atgcaaacga ttatccgcgt cgaacaactg agcaaaacct tcaatcagca
    28081 tcaggcgctg cacgcggttg atctgaatat ccatcatggt gaaatggtgg ctctgcttgg
    28141 gccgtccggt tccggcaaat ccaccctttt acgtcattta agcggtttga ttaccggcga
    28201 taaatccgcc ggtagccata tcgagctact gggccgcact gtccagcgcg aaggccgtct
    28261 ggcccgcgat atccgcaaaa gccgcgccca tacgggctac atcttccaac aattcaacct
    28321 ggtgaatcgc ctgagcgtac tggagaacgt gctaattggc gcgctcggca gcacgccgtt
    28381 ctggcgcacc tgttttagct ggtttacccg cgagcagaaa cagcgggcgt tacaggcgct
    28441 gacccgcgtt ggcatggtgc attttgccca tcaacgcgtt tctacgctct ccggcggcca
    28501 gcagcaacgt gtggcgattg cccgcgcgct gatgcagcag gcgaaggtga ttctggcgga
    28561 cgaaccgata gcctcgctgg acccggaatc agcgcgcatc gtgatggaca ccctgcgcga
    28621 catcaaccag aacgacggca tcaccgtggt cgtcacgctg catcaggtgg attacgccct
    28681 gcgctactgc gaacgcatcg tcgccctgcg tcaggggcac gtcttctacg acggcagcag
    28741 ccaactgttt gataacgaac gttttgacca tctctaccgc agcattaatc gcatcgaaga
    28801 gaacgcgaaa gctgcctgac atccccatca ttgaggaaaa cgaatgaacg ctaagataat
    28861 tgcctcgctg gccttcacca gcatgttcag cctcagcacc ctgttaaccc cggcgcacgc
    28921 cgaagagcag gaaaaggcgt tgaatttcgg cattatttca acggaatcac agcaaaacct
    28981 gaaaccgcaa tggacgccgt ttttacagga tatggagaag aagctgggcg tgaaggtcaa
    29041 cgccttcttt gccccggact atgcgggcat tatccaggga atgcgtttca acaaagtgga
    29101 tatcgcctgg tacggcaacc tgtcggcgat ggaagcagtg gatcgcgcca acggccaggt
    29161 cttcgctcag accgtcgcgg cggatggatc gccgggttac tggagcgtgt tgatcgtcaa
    29221 caaagacagc ccgatcaaca acctgaacga tctgctggcg aagcggaaag atctcacctt
    29281 cggcaatggc gatcctaact ccacctctgg cttcctcgtc cccggttact acgtctttgc
    29341 caaaaacaat atctccgcca gcgactttaa gcgcaccgtc aacgccgggc atgaaaccaa
    29401 cgcgctggcc gtcgccaaca agcaggtgga tgtggcgacc aacaacaccg aaaacctcga
    29461 caagctgaaa acctccgcgc cagagaagct gaaagaactg aaggtgatct ggaagtcgcc
    29521 gctgatccca ggcgatccga tcgtctggcg caagaatctc tccgaaacca ccaaagacaa
    29581 gatctacgac ttctttatga attacggcaa gacgccggaa gagaaagcgg tgctggaacg
    29641 cctgggctgg gccccgttcc gcgcctccag cgacctgcaa ctggtgccga ttcgtcagct
    29701 cgcactgttt aaagagatgc aaagcgtgaa aggcaataaa gggctaaatg agcaggacaa
    29761 gctggcaaaa accaccgaga ttcaagcgca actggatgac ctggaccgcc tgaacaacgc
    29821 gctaagcgcg atgagttcgg tgagtaaagc ggtgcagtaa tgtgctcgat cggtcccctc
    29881 tcccttgagg gtgaggggga aatgcgcacg ctgatgccct caccccgacc ctctcccaca
    29941 gggagaggga gaaaacatta aacggagcca aacatgcaaa ccatcaccat cgccccaccc
    30001 aagcgtagct ggttcttgct tctgagctgg gccgttgtac tcgccgtgct ggtcgtctcg
    30061 tggcagggcg cggaaatggc cccgcttacg ctgattaaag acggcggcaa catggcaacc
    30121 ttcgctgccg acttcttccc gcccgatttc agccagtggc aggattacct caccgaaatg
    30181 gccgtcacgc tgcaaatcgc cgtctggggc accgcgctgg cagtggttct ctccatcccc
    30241 ttcggcctga tgagcgccga aaacctggtg ccgtggtggg tttaccagcc cgttcgccgc
    30301 ctgatggacg cctgccgcgc cattaacgaa atggtcttcg ccatgctgtt cgtggtcgcc
    30361 gtcggcctcg gcccattcgc tggcgtgctg gcgctgttta tccacaccac cggcgtgctc
    30421 tcgaaactgc tttccgaagc ggtggaagcg attgaacccg gcccggtgga aggcattcgc
    30481 gccaccggcg ccaacaagct ggaagagatc ctctacggcg tgctgccaca ggtgatgccg
    30541 ctgctgatct cctactccct ctatcgcttc gaatccaacg tccgctcggc gaccgtcgtc
    30601 ggcatggtcg gcgcgggcgg gatcggcgtc acgctgtagg aagcgattcg cggtttccag
    30661 ttccagcaaa cctgcgccct gatggtgctt atcatcgtca cggtcagcct gctggatttc
    30721 ctctctcaac ggttgcataa gcactttatc tgataagcga ggcattgata tctatgcact
    30781 tgtctacaca tccgaccagc tacccaacac gctatcagga gatagccgca aaacttgagc
    30841 aggagcttcg tcaacactac cgctgcggcg actatcttcc cgccgagcag caactggcgg
    30901 cgcgctttga ggtgaaccgc cacaccctgc gccgcgccat cgaccaactg gtggaaaaag
    30961 gctgggtaca gcgccgtcag ggcgtcggcg tgctggtgct gatgcgcccg ttcgattacc
    31021 cgctcaacgc ccaggcgcgt tttagccaga acctgctgga ccagggcagc catcccacca
    31081 gcgaaaaact gctgtcggta ttgcgccccg cgtccggtca cgttgctgac gcgctgggga
    31141 ttaccgaggg cgagaacgtt atccatttgc gcaccctgcg tcgcgtcaac ggcgtcgcgc
    31201 tctgtttaat cgaccactac tttgcggacc tcaccctttg gccgacgctg caacgcttcg
    31261 acagcggttc gctgcacgat tttctgcgcg agcaaaccgg aattgcgctg cgccgcagcc
    31321 agacgcggat cagcgcccgc cgcgcccagg ccaaagagtg ccagcgcctt gaaatcccga
    31381 atatgtcgcc gctgctgtgc gtgcgcaccc ttaaccaccg tgacggtgaa agcagcccgg
    31441 cggagtactc cgtcagcctg acgcgcgccg acatgattga attcactatg gagcactgaa
    31501 tgcacgcaga taccgcgacc cgccagcact ggatgtccgt actggcgcac agccaaccgg
    31561 ctgaactggc agcccgcctg aacgcgctga acatcaccgc cgactatgaa atgatccgca
    31621 ctgccgaaac tggcctggtg cagattcagg cgcgaatggg cggtaccggc gaacgctttt
    31681 ttgccggcga cgccacgctg acccgcgccg ccgtacgcct gactgacggc accctcggct
    31741 acagctgggt gctggggcgc gacaaacagc acgccgaacg ctgcgcgctg attgacgcgt
    31801 tgatgcagca atctcgccat tttcaaaact tatcagaaac ccttattgcc ccgctggacg
    31861 ctgaccgtat ggcacgcatt gccgcacgcc aggccgaagt gaacgccagc cgggtcgact
    31921 tctttacgat ggttcgcgga gacaacgcat gaccctggaa accgctttta tgcttcctgt
    31981 gcaggatgcc cagcacagtt ttcgtcgcct gttaaaggcc atgagcgagc cgggcgtgat
    32041 tgtcgccctg catcagctca agcgcggctg gcagccgctg aatatcgcca ccaccagcgt
    32101 gctgctgacg ctggctgata acgacacgcc ggtgtggctt gccgcgccat tgagtaacga
    32161 tatcgtcaat cagagcctgc gttttcatac caacgcgccg ctggtcagcc agccggagct
    32221 ggcgaccttc gcggtgacgg atgacggaat ttccagcgaa cagctcaacg ccctttccac
    32281 cggcaccgcc gttgcgccgg aagcgggtgc gacgctgatt ttacaggtcg ccagcctgag
    32341 cggcgggcgc atgttgcgcc ttactggtgc gggtattgcc gaagaacgaa tgatcgcccc
    32401 gcaactgccg gagtgcattt tgcacgaact caccgagcgc ccgcacccgt tcccgctcgg
    32461 catcgacctg atcctgacct gcggcgagcg cctgctggct atcccgcgaa ccactcatgt
    32521 ggaggtgtgc tgatgtacgt tgccgtgaaa gggggcgaaa aggcgatcga cgccgcccac
    32581 gccctgcaag agagccgacg ccggggcgat accgatttgc ctgaactgag cgtcgcccag
    32641 attgaacagc agcttaatct cgcggtggat cgcgtgatga ccgaaggcgg cgttgccgac
    32701 cgcgaactgg cggcgctggc gctgaaacag gccagcggcg ataacgttga agcgattttc
    32761 ctgctgcgcg cctaccgcac cacgctggcg aagcttgcgg tgagcgagcc gctcgacacc
    32821 accgggatgc gtctcgaacg gcgtatttcg gcagtttata aagacattcc cggcggccag
    32881 ctgcttggcc caacctacga ctacacccat cgcctgctcg atttcaccct gctggcaaac
    32941 ggtgaagcgc cgacgctgac caccgccgac agcgaacaac agccgtcgcc gcacgttttc
    33001 agcctgctgg cgcgtcaggg gctggcgaag tttgaagaag atagcggcgc acagccggat
    33061 gacatcaccc gcacgccgcc ggtttacccc tgctcacgct cctcccgcct gcaacaatta
    33121 atgcgcgggg acgaaggcta tttgctggcg ctggcctact ccacccagcg tggttacgga
    33181 cgcaatcacc cgttcgcggg cgagatccgc agtggttaca tcgacgtgtc gattgtgccg
    33241 gaagagctgg gatttgcggt aaacgtcggc gaactgctga tgaccgagtg tgaaatggtc
    33301 aacggtttta tcgacccgcc ggatgagccg ccgcacttca cgcgcggcta cgggctggta
    33361 ttcggcatga gcgagcgcaa agcgatggcg atggcgctgg ttgaccgtgc gttgcaggct
    33421 ccggagtacg gcgagcacgc gacaggcccg gcgcaggatg aagagttcgt gctggcacat
    33481 gccgacaacg tcgaagccgc aggctttgtc tcgcacctca aactccccca ctacgtcgat
    33541 ttccaggccg aactggagct actcaaacgt ctgcaacagg agcagaacca tggctaatct
    33601 gagcggctac aactttgcct acctcgacga gcagaccaaa cgcatgatcc gccgcgccat
    33661 cttaaaagcg gtggctatcc ccggttatca ggtgccgttt ggcgggcgcg agatgccgat
    33721 gccctacggc tggggaaccg gcggcattca gctcaccgcc agcgtgattg gcgaaagcga
    33781 cgtgctgaag gtgattgacc agggcgcaga cgacaccacc aacgccgtgt cgattcgcaa
    33841 cttctttaag cgcgtgaccg gggtaaacac cactgaacgt acggacgatg cgacgcttat
    33901 ccagacgcgt caccgcatcc ccgaaacgcc gctgaccgaa gatcagatca ttatttttca
    33961 ggtgccaatc cccgagccgc tgcgctttat cgagccacgc gaaacggaaa cccgcaccat
    34021 gcacgcgctg gaggagtacg gcgtgatgca ggtgaaactg tatgaagata tcgcccgctt
    34081 cggtcatatc gccactacct acgcctatcc ggtgaaggtg aacgggcgct acgtaatgga
    34141 cccgtcgccg atcccgaaat tcgataaccc aaaaatggac atgatgcccg ccctgcaact
    34201 gttcggcgcg gggcgcgaga agcgcatcta tgcggtgccg ccgtttaccc gcgtggaaag
    34261 tctcgatttc gacgatcacc cgttcaccgt tcagcagtgg gatgagccgt gcgccatctg
    34321 cggatcgacc cacagctatc ttgatgaagt ggtgctggat gacgccggaa accgcatgtt
    34381 tgtctgctcc gataccgatt attgccgcca acagagcgag gcgaaaagcc aatgaatcaa
    34441 ccgttacttt cggtcaataa cctgacccac ctttacgcgc cgggcaaagg ctttagcgat
    34501 gtctcttttg atttatggcc gggggaagtg ctgggcattg tcggggaatc cggctccggg
    34561 aagaccacgc tgctgaagtc gatctccgcc cgtctgacgc cgcagcaggg ggagattcac
    34621 tacgagaacc gttcgctgta tgcaatgagc gaggccgacc gccgtcgcct gctgcgcacc
    34681 gaatggggtg tggtgcatca acatccgctt gacggcctgc gccgccaggt gtcggcaggc
    34741 ggcaatatcg gcgagcggct gatggcgacc ggggcgcgtc attacggcga tattcgcgcc
    34801 accgcgcaga agtggctgga agaggtggaa attcccgcca accggatcga cgacctgccg
    34861 accacctttt ccggcggcat gcagcaacgt ttgcagattg cccgcaacct ggtgacgcat
    34921 ccgaagctgg tgtttatgga cgagccaacc ggtgggctgg atgtgtcggt gcaggcacgc
    34981 ctgctcgatc tactgcgcgg cctggtggtg gagctgaacc tggcggtggt gattgttacc
    35041 cacgatctgg gcgtcgcccg cctgctggcg gaccgtttgc tggtgatgaa gcaggggcaa
    35101 gtagtggaga gtgggttaac cgaccgcgtg cttgacgacc cgcaccatcc gtatacccag
    35161 ctgctggtgt catcggtttt gcagaattga gccggtgccg gatgcggcgt aaacgcctta
    35221 tccggcctac aaatgcgctc cccgtaggtc ggataagacg cgtcagcgtc gcatccgaca
    35281 cccgaaccac gaggcgaaaa atgattaacg tacaaaacgt cagtaaaacc ttcatcctgc
    35341 atcagcaaaa cggcgtacgc ctgcccgtct tacaacgtgc ctcgctcacc gtcaacgcag
    35401 gcgaatgcgt ggtgctccac ggtcactccg gcagcggcaa atcaaccctg ctgcgctcgc
    35461 tgtacgccaa ctatctaccc gacgaaggtc aaatccagat caaacacggt gacgagtggg
    35521 tagacctggt caccgcgcca gcgcgcaaag tggtggaaat ccgcaaaacc accgtcggct
    35581 gggtgagcca gtttctgcgc gtcatcccgc gtatctcagc actggaagtg gtgatgcagc
    35641 cgctgctcga taccggcgtt ccgcgtgaag cctgcgccgc taaagccgcg cgtcttctca
    35701 cccgcctgaa cgtgccggaa cgcctgtggc acctggcacc atcgaccttc tccggcggag
    35761 aacagcagcg cgtcaacatc gcccgcggct ttatcgtcga ctaccccact ctgctgctcg
    35821 acgaacctac cgcctcgctg gacgccaaaa acagcgccgc ggtggtggaa ctgattcacg
    35881 aagccaaagc ccgtggcgca gccatcgtcg gcatcttcca taacgaagct gtacgtaatg
    35941 acgtcgccga ccgcctgcac ccaatgggag cctcttcatg attatcaata acgttaagct
    36001 ggtgctggaa aacgaggtgg tgcacggttc gctggaggtg caggatggcg aaatccgcgc
    36061 ctttgccgaa agccagagcc gcctgccaga agcgatggat ggcgaaggcg gctggctgct
    36121 gccggggctg attgagctgc ataccgataa tctggataaa ttcttcaccc cgcgcccgaa
    36181 ggttgactgg cccgcccact cggcaatgag cagccacgat gcactgatgg tggcaagcgg
    36241 catcaccacc gtgctggacg cggtggcgat tggcgacgtg cgcgacggcg gcgatcggtt
    36301 ggagaatctg gagaagatga tcaacgccat cgaagagacg caaaaacgtg gcgtcaaccg
    36361 cgccgagcac cgtctgcacc tacgctgcga gctgccacac cacaccacgc tgccgctgtt
    36421 tgaaaaactg gtgcagcgcg aaccggtgac gctggtgtcg ctgatggacc actcgccggg
    36481 ccagcgccag tttgctaacc gcgagaagta tcgcgaatat tatcagggca aatactccct
    36541 caccgatgcg cagatgcagc agtatgaaga ggaacagctg gcgcttgccg cacgctggtc
    36601 acagcctaat cgcgaaacca tcgccgcaat gtgccgcgcg cgacaaattg ccctcgccag
    36661 ccacgatgac gccacccacg cccacgttgc cgaatcccac cagcttggca gcgtgatcgc
    36721 cgaatttccc accacgttcg aagcggcaga agtttcgtgc aggcatggca tgaacgtgct
    36781 gatgggtgcg ccgaatatcg tgcgcggcgg ttcgcactcc ggcaacgtgg cggccagtga
    36841 actggcgcag cttggcctgc tggatatcct ctcttccgac tactaccccg ccagcctgct
    36901 ggatgcagcg ttccgcgtcg ccgatgacga gagcaaccgc tttacgttgc cgcaggcggt
    36961 gaagctggtg accaaaaatc cggcgcaggc gcttaatctc caggatcgtg gggtgattgg
    37021 cgagggcaaa cgcgcggacc tggtgctggc gcatcgcaag gacaatcata ttcatatcga
    37081 ccacgtctgg cgtcagggta aaagggtgtt ctgatgatgg gaaaactgat ttggttaatg
    37141 gggccgtccg gctccgggaa agacagcctg ctggcggaaa tccgcctgcg ggaacaaact
    37201 cagttactgg tggcgcatcg ctacattacg cgcgacgcca gcgccggaag tgaaaaccat
    37261 atcgccctga gcgagcaggg gttttttacc cgcgcggggc aaaatctgtt ggccttaagc
    37321 tggcacgcta acggtctgta ttatggcgtc ggcgtcgaga ttgatctctg gctgcacgcc
    37381 ggattcgacg tgctggtcaa cggctcacgc gcccatctgc cgcaggcgcg ggcgcgctat
    37441 caatcggcgc tgctgcccat ttgcttacag gtttcgccgg agatcctgcg ccagcgcctg
    37501 gaaaaccgcg gccgcgaaaa cgccagtgaa attaacgccc agctggcgcg cgccgcccgc
    37561 tatactccac aggattgcca tacgctcaat aatgacggca gcctgcgcca gtcggtcgac
    37621 acgctgctaa cgctgattca tcagaaggag aaacaccatg cctgcttgtg agcttcgccc
    37681 ggccacgcag tacgacaccg acgcggttta cgcgctgatt tgtgagctaa aacaggcgga
    37741 gtttgaccac cacgcgtttc gcgtgggctt taacgccaac ctgcgtgacc cgaacatgcg
    37801 ctaccatctg gcgctgctgg atggcgaagt tgtcggcatg atcggcctgc atttgcagtt
    37861 tcatctgcat catgtcaact ggatcggcga aattcaggaa ctggtggtga tgccgcaggc
    37921 gcgcggcctg aacgtcggta gcaagttgct ggcgtgggca gaagaagaag cccgccaggc
    37981 cggggccgaa atgaccgagc tttcgaccaa cgtgaagcgc cacgacgcgc accgtttcta
    38041 tctgcgagaa ggctacgagc agagtcactt acgcttcacg aaggcgctgt aacatgagtc
    38101 tgcccctcac gctcaccggc accggcggcg cacagggcgt tccggcatgg ggctgcgagt
    38161 gcgcggcctg cgaccgagcg cggcgctcac cgcagtatcg ccgccagcca tgcagcggcg
    38221 tagtgaagtt taacgacgca atcaccctga tcgacgccgg gctgcacgat ctcgccgatc
    38281 gctggtcgcc cggatcgttc cagcagtttt tgctgacgca ctaccatatg gatcacgtgc
    38341 aggggctatt cccgctgcgc tggggcgtgg gcgatccgat cccggtttac ggcccgccgg
    38401 atgaacaggg ctgcgacgat ctgtttaaac atccgggcct gcttgatttc agccacacgg
    38461 tggaaccgtt tgtggtgttt gatttgcagg ggttacaggt cacgcccctg ccgctcaacc
    38521 actcaaaact gaccttcggt tatctgctgg aaacggcaca cagccgggtg gcgtggctgt
    38581 ctgacaccgc aggcttgccg gaaaaaacgc tgaaattttt acgcaataat cagccgcagg
    38641 taatggtgat tgattgcagc cacccgccgc gcgaggatgc gccacgtagt cactgtgatt
    38701 taaacaccgt gctggcgctg aatcaggtta tccgctcgcc acgggtgatt ctgacccata
    38761 tcagccacca gtttgatgcg tggctgatgg aaaacgcact gccgtcgggg tttgaggcgg
    38821 ggtttgatgg gatggagatt ggggtggcgt gatgagaggg aatgtgcgcg ctggccccct
    38881 caccctaacc ctctccccat tggggtgagg ggcgatgcct gctccatacc caacctcatc
    38941 gcccatactc atcttccatt ctccgctctt catcttctag ctgccgacgc tcctgatcaa
    39001 gctggcgctg gcgatcgtcc agctgcctgc ggcgatcttc aaactggcgg cggcggtcgt
    39061 catattgtct gcgccgatcg tcgctcactt cacgctgcca gccgtcgtcg cgcgaatctt
    39121 catagtctcg cccacggtca gggttataag cgtcgttaat cgcctgctga atcttgccaa
    39181 tggtgtcgtc gataatatcg gcctgggccg gaacggtgga cagcgtgaga actcgttgtt
    39241 tgtcgctact ccggcgcaag atccacaggt gatggcagcg aaagcggttg agatcggtta
    39301 tgacattttg cagggcaaac ctgcgccgaa agagctggtg ctgatcccgg tgacgatgat
    39361 cgataaaaac aacgtcggca attacaaagg ctggacggtg aaataagtcc acacgccggg
    39421 cggcgatgct gcccggccac cgctaaggag aacgctttcg atgaaacgct ccgctataaa
    39481 caacattctc ggccatacac ggcaattctt ttcgcaacat gacgtacatc tgccgccctt
    39541 tgccaatttc tctcctgctc aatggcagca gctcgacacc gccgcgtggg aggaggtttt
    39601 tgatctcaaa ctcggctggg atgttaccgc ttttggtggt aacaactttg cagcacaggg
    39661 gctgacgctg tttaccctgc gtaacggctc agcaaaagga atgccgtatg tgaaatgtta
    39721 cgccgagaag atcatgcatg tgcgcgatgc gcaggtcacg ccaatgcatt ttcactggcg
    39781 taagcgtgag gacatcatca atcgcggcgg cggcaatttg attgttgaac tgtggaatgc
    39841 cgatagcaac gagcaaacag ttgataccga cgttacggtg gtgatcgacg gctgccgcca
    39901 gactcatgtc gcaggcagtc agttacgcct gtcccccggc gaaagtatct gcctgccgcc
    39961 cggcctgtat cacagctttt gggcggaaac cggttttggc gatgttctgg ttggcgaagt
    40021 ctcttctgtc aatgacgacg accacgataa ccacttttta caaccgctgg accgctacaa
    40081 cctgattgac gaagacgaac cggcccagct ggtgttgtgt aacgaatacc gccagttcct
    40141 ctgaataagg ataacgttat gccgttgatt tctctcgctg aagggctggc acatgcccgc
    40201 gaacatcact atgcgttagg tgcgtttaat gtgctggact cacacttttt acgcgccttg
    40261 tttgctgctg ccagacaaga acgttcgccc tttattatca acattgccga agtacatttt
    40321 aaatatatct cgctggattc cctggtcgag acagtgaaat ttgaagcggc gcgtcaagcg
    40381 attccggtgg tattaaatct cgatcacggg ctgcattttg aatcggtggc gcaagcgttg
    40441 cggctgggat tcagctcggt aatgtttgat ggctccacgc tggggtatga agagaatatc
    40501 cgccagacgc gggaagtggt gaaaatgtgc catgccgttg gcgtatcggt agaagctgaa
    40561 ctgggcgcgg tgggtggtga cgaaggcggt gcgctttacg gtcatgccga tgaatctctg
    40621 tttaccgatc cgcagctggc gcgtgatttt gtcgaccgta ccggcattga cgcgctggcc
    40681 gtggcgattg gcaatgcaca cggcaaatat cgcggcgaac cgaaactcga tttcccgcgc
    40741 ctcgacgcta tccgccagca ggcggctatc ccgctggtat tacacggcgg ctcagggatt
    40801 agagatgccg atttccgccg cgccatcgaa ctgggtatcc acaaaatcaa tttctacacc
    40861 ggcatgtcac aagcggcgct ggctgccgtt gaggcccgaa tggcgcaccg tcagccgatg
    40921 tatgacgagt ttgccgagtt actactagca gtggaagccg ccatcagcga tacggttgca
    40981 caacagatgc gtattttcgg cagtgcgggg caggcatgat ggaacgtaaa gggattatcg
    41041 ccgcaggcaa tatgctggtt gaccacgtcc accagattat ccagtggcca gagcgcggct
    41101 ggctggcgga gattacccac agcgaacgct ccaccggcgg cgcgccgctt aacgtcctgc
    41161 tgacactggc gaaaatgcgc accgggttgc cgttacaggc ggtcgggcta atcggtcagg
    41221 gcagcgacgg cgattacatt atggcgatgc ttgagcaata tcacgtcaat cgtcagcatg
    41281 tgcagcgcac tacctttgcc ccgacgtcaa tgtcgcaggt aatgactgat ccaagcgggc
    41341 agcggacgtt tttccattcg ccaggtacaa acagactttt ggatcttccg gcgttcgatc
    41401 agctcgataa caccatgaag attttccatc tcggctattt actgttgctc gacagcctgg
    41461 atatgccgga cgatgtttac ggcacccgta gcgcacgcct gctggcgcaa atgcgtgata
    41521 ctggctttga aacctcactc gacctggtct cccgcaaggg cgatccgcgt tatcagccgc
    41581 tggtgctgcc cgcgttgcgc catctggatt acctggtaat taacgaactg gaggccgggg
    41641 agtttagcgg gctggaaatt cggttaccca acggcgaacc gcatatcgcg catattgctg
    41701 ccgccgcgcg tgaactgtta gatgcgggcg tgcgccagcg tgtggtgatc cactgcccgg
    41761 aaggggcgtg gggagagacc ccggaacagt gcggcgtgtg gatcccttcg caaaagttag
    41821 aacaacggga aattatcggc agcgtcggtg cgagcgatgc attttgtgcc ggatttttat
    41881 atggctgcca tgaacgctgg acgcttaccg agagcatcaa actggcacac gcctgcgcgc
    41941 gagcaagcct gttatgcgcc aatgccatcg acggggcgaa aacgctggaa gagctgcaaa
    42001 cagaaatgtc ggattaatgc acgtcggcag cgaagacata ccccagaccg cgcagagttt
    42061 taatcaacat cggctgatgc gggttgagtt cgattttgcg tcgtaagcgc atgattaata
    42121 cgtcgatggt gcgatcaaac acctccacgc tgtcgctatg agtgaacgcc agcaactgtt
    42181 cgcggcttaa tacccgacgg gcattttgag ccagggccag taacaagcca tattcgccct
    42241 gagtcagctc gacatgttgt agcggactat gcagttggca gcgaatggta tcgagatacc
    42301 agccattgaa tgacagcccg gcgtttttct cctcattagc cgccagcgcg ccaacccgtc
    42361 gcaacaccgc tttcagtcgt gcgaccacca cccgtggggt gaacggcttg cagatgtaat
    42421 catccgcgcc catttccagc ccgaccacca catcagactc actccccatt ccggtcaaca
    42481 tcaccacagg caatgccgga cgcagtttct ggatttgctg caataccctc aggccgttgg
    42541 tatcgggcag catcatatcc agcaccacca gcgcaatgtc aggctcgccc tcaatacgcg
    42601 atatggcctc ctgtccggta tggctgactg aaaccgtaaa gacatgttca cttaacacgt
    42661 cctgcaacag tgcgcagata gccgtgtcat catccaccac cagcacgacg ggtttcatgg
    42721 ttacactccg catcattcat ctaattaatc attgtgcgta cttcttgtcg aagtgaaagc
    42781 ggaaagtaat ataaataata aaaatataag tcaggtcaca ttattgatga tagtaataaa
    42841 tatgccgtgc ttttccctct tcagcacaaa tgcctaataa aatggcgcgt tccgctcaca
    42901 cttccactta ttaaagtcgc aaattcccaa ttatgataac cccagcttta aatgacgtat
    42961 tttgcatgga ttacatattt acgacataaa tgataaatgg agatttatat gaataactct
    43021 cggttattcc gtttgagcag aattgttatt gcgttaactg ccgccagcgg catgatggta
    43081 aataccgctt acgcgaaaga ggaagcgaaa gccgccactc aatataccca acaggttaat
    43141 cagaattacg ccaaatcatt accgtttagc gatcgtcagg attttgacga tgcccagcgt
    43201 ggatttatcg ctccgctgct ggatgaaggt attctgcgtg atgcgaacgg taaagtttac
    43261 taccgcgcag atgattacaa atttgatatt aatgccgcag cgccggaaac cgtaaacccc
    43321 agcctgtggc gtcagtcgca gatcaacggc atttctggcc tgttcaaagt caccgataaa
    43381 atgtatcagg tgcgcggcca ggatatctct aacattacgt tcgttgaggg cgagaaaggc
    43441 attattgtta ttgacccact ggtgacgcca cctgccgcaa aagccgcact tgacctttac
    43501 ttccagcatc gtccgcaaaa accgattgtt gccgttattt acactcacag ccacactgac
    43561 cactatggtg gcgtgaaagg tattatctct gaagccgatg ttaaatccgg caaagttcag
    43621 gtgattgccc ctgcgggctt tatggacgaa gccatcagcg aaaacgtgct ggcgggtaac
    43681 atcatgagcc gccgtgcgct ctactcttac ggtctgttac tgccgcacaa cgcgcaaggc
    43741 aacgtgggta atggccttgg cgtgacgctg gcaacgggcg acccgagcat tattgcaccg
    43801 actaaaacta tcgtcagaac tggcgagaag atgattatcg acggcctgga gtttgacttc
    43861 ctgatgaccc caggtagcga agcgccagcc gaaatgcact tctatattcc ggccctgaaa
    43921 gccctgtgta ccgccgagaa cgccacgcat accctgcaca acttctacac tctgcgcggc
    43981 gcgaaaaccc gcgacaccag caagtggacc aagtatctga acgaaacgct ggatatgtgg
    44041 ggtaacgacg cggaagtgct gtttatgccg cacacctggc cggtctgggg caataagcat
    44101 atcaatgatt atattggtaa atatcgcgat actatcaagt acattcacga ccagaccctg
    44161 cacctggcga accagggcta caccatgaat gaaatcggcg acatgattaa gctgccgcct
    44221 gcgcttgcca ataactgggc cagccgcggc tattacggtt ctgtcagcca caacgcccgc
    44281 gcggtgtata acttctatct tggctattac gacggtaacc cggctaacct gcatccgtat
    44341 ggtcaggtgg agatgggcaa acgttacgtg aaagcgctgg gcggttctgc ccgtgtcatc
    44401 aacctggcgc aagaagcgaa caagcaaggt gattgccgcc aacccgggtg accaggtcgc
    44461 gaagaatctg caagcgaata actttgaaca gttgggctat caggccgagt ccgccacatg
    44521 gcgtggtttc tacctgaccg gcgcgaaaga gctgcgcgaa ggggtgcata agttcagcca
    44581 cggcaccacc ggttccccgg acaccattcg cggaatgtcg gtcgaaatgc tgttcgactt
    44641 tatgtccgtt cgcctcgata gcgcgaaagc cgcgggtaaa aatatcagcc tgaacttcaa
    44701 tatgagcaac ggcgataacc tcaacctgac gctgaacgat agcgtgctta actaccgtaa
    44761 aacgctgcaa tcccaagctg acgcctcttt ctacatcagc cgtgaagatc tgcacgccgt
    44821 gctgaccgga caagccaaaa tggcggatct ggtaaaagcg aagaaagcca aaattattgg
    44881 caatggcgcg aaactggaag aaattattgc ttgtctggat aatttcgatt tgtgggtgaa
    44941 tatcgtaacc ccaaattaat gccactcact tttgggggcg cttaagcccc caaaagcatt
    45001 tattataaaa atacatacaa ccaattaata cataaaatat ataagttatg aatgcggtgg
    45061 ctgaataaag ctatttttat tcatcaagaa aatagccata ctgacgcctt caatggatat
    45121 tgatattcac tacagatatt gttcgcagca gacaggatgt atttaatatg ccaacagttc
    45181 tctctcgcat ggcgatgcaa ctcaaaaaaa cagtctggat aattcccgtc ttcatggttt
    45241 cgggatgctc attatctccg gcaatcccgg tgatcggcgc ttattatccc agctggtttt
    45301 tctgcgccat tgccagcctt attttgacgc tcatcacgag gcgaattatt cagcgggcaa
    45361 atatcaatct ggcatttgtc ggaattattt ataccgccct ttttgctctc tacgccatgc
    45421 tgttctggct ggcatttttc taatctattt gagacgcgct catggaaagt acgccgaaaa
    45481 aagctcctcg cagtaaattc cctgctctgt tagtggttgc attggcgctg gttgcccttg
    45541 ttttcgttat ctggcgcgta gacagtgcgc catcaactaa tgacgcttac gcgtcagcag
    45601 ataccattga tgtggtgcca gaagtcagcg gtcgcattgt agaactggcg gtcaccgaca
    45661 accaggcggt gaagcagggc gatttgctgt tccgcatcga cccgcgcccg tacgaagcca
    45721 acctggcgaa agccgaagcc tccctcgcgg cgctggataa gcaaattatg ctcacccagc
    45781 gtagcgttga cgcccaacag tttggtgccg actcggttaa cgccacggta gaaaaagccc
    45841 gtgccgccgc taaacaggcc agcgatacgt tacgccgtac cgagccgtta ctgaaagaag
    45901 gttttgtctc agcggaagac gttgaccgtg cgaggaccgc gcagcgcgcc gcagaagcag
    45961 atcttaatgc cgtattgtta caggcgcagt cagccgccag cgccgtcagc ggcgtcgatg
    46021 cgctggtggc gcaacgtgcg gcggtcgaag cggatattgc cctgaccaaa ctgcatctgg
    46081 aaatggcgac cgttcgcgcg ccgtttgatg gccgggtcat ttccctcaaa acctccgtcg
    46141 ggcaatttgc ttctgccatg cgccctattt ttaccctaat cgacactcgt cactggtacg
    46201 tgatcgccaa cttccgcgaa accgatctga aaaatattcg ctcaggtaca cccgcaacga
    46261 ttcgcctgat gagtgacagc ggcaaaacct tcgagggtaa agtggattcg attggctacg
    46321 gcgtgctacc ggatgacggc ggcctggtgc tgggcggcct gccgaaagtg tcacggtcta
    46381 ttaactgggt ccgcgttgcc cagcgttttc cggtcaaaat catggttgat aaacctgacc
    46441 cggaaatgtt ccgcatcggc gcttcggcag tcgctaatct tgagccgcaa taatgagcgc
    46501 gctcaactcc ctgccattac cggtggtcag gctgctggcg ttctttcatg aagagttaag
    46561 cgagcggcga cccggccgcg tgccgcagat cgtgcaactc tgggtaggct gcctgctggt
    46621 gattctgatc tcgatgactt ttgagatccc ttttgtggcg ttatcgctgg cagtgctgtt
    46681 ttacggtatt cagtcgaacg cgttttacac caaatttgtc gcgatcttgt ttgtggttgc
    46741 cacggtgctg gagatcggca gcctgttttt gatctacaaa tggtcatacg gcgaaccgtt
    46801 gatccgattg atcatcgccg gaccgctcct gatgggctgt atgtttttga tgcgcaccca
    46861 tcggctggga ctggtctttt tcgccgtcgc cattgtcgcc atttacgggc aaaccttccc
    46921 cgccatgctc gactatccgg aagtggtcgt gcgcttaacg ctgtggtgta tcgttgttgg
    46981 cctttatcca accttgctga tgacgttaat cggcgtgctg tggtttccca gtcgtgccat
    47041 tacgcaaatg catcaggcgc ttaatgatcg gcttgatgat gccattagcc acctgacgga
    47101 cagcctcgca ccgctacccg aaacgcggat tgaaagagag gcgctggcgc tgcaaaaact
    47161 caatgtcttt tgcctcgcgg acgatgccaa ctggcgaacc cagagcgcat ggtggcaaag
    47221 ctgcgtggca acggtaacct acatttattc gacgctgaat cgctacgatc ccacctcttt
    47281 tgctgattct caggcaatta ttgaattccg acaaaaatta gcttcagaaa tcaacaagct
    47341 gcagcatgcc attaccgaag gtcagtgctg gcaaagcgac tggcggatca gtgaaagtga
    47401 agcgatggcg gcacgggaat gtaacctgga gaatatctgc cagacgttgt tacaactggg
    47461 tcagatggac ccgaatacgc cgccaacgcc cgccgccaaa ccgccatcaa tggccgccgc
    47521 caaaccgcca tcaatggccg ccgatgcttt taccaatcca gactatatgc gctacgcggt
    47581 aaaaacgctg ctcgcctgtt tgatctgtta caccttctac agcggcgtgg actgggaagg
    47641 cattcacacc tgtatgctga cctgcgtgat cgtcgctaac ccaaatgtcg gttcgtcgta
    47701 ccagaagatg gtgctgcgtt ttggcggggc cttttgcggc gcgattctgg cgctgttatt
    47761 cacgctactg gtcatgccct ggctggacaa tattgtcgaa ttgctgtttg tgctggcacc
    47821 gattttcctg ttgggcgcat ggattgccac aagctctgaa cgctcttctt atatcggcac
    47881 acagatggtg gtcaccttcg cgctcgccac gctcgaaaac gtttttggtc cggtgtacga
    47941 cctggtggaa attcgcgatc gcgccctggg tatcatcatt ggtaccgtgg tgtctgcggt
    48001 gatttacacc tttgtctggc ctgaaagtga agcgcgcacg ctgccgcaaa aactggccgg
    48061 tgcgctgggt atgctaagta aagtaatgcg gatcccacgc cagcaggaag tcactgctct
    48121 gcgcacttat ctacaaattc gtataggtct gcatgcggcg tttaatgcct gtgaagagat
    48181 gtgccaacgc gtggcgctgg agcgtcaact ggacagcgaa gaacgcgcct tactgattga
    48241 acgttcgcaa acggttattc gtcagggccg cgatattctt cacgcctggg atgccacctg
    48301 gaactcggcg caggcgctgg ataacgcact acagccggac agagcaggtc agtttgccga
    48361 cgccctggag aaatacgctg ccggtctggc aaccgcactc agccgttctc ctcaaataac
    48421 gcttgaagag acacccgcct cgcaggccat cctgcccacc ttattaaaac aggagcaaca
    48481 cgtctgccag cttttcgccc gcttgccaga ctggacagcc ccggcattaa cgcccgccac
    48541 ggaacaggca caaggagcca cgcaatgatc aatcgtcaac tttcacgtct gatgttgtgc
    48601 agcattctcg gcagcacgac gctgatttcc ggctgtgccc tggtacgcaa ggattctgcg
    48661 cctcatcaac agctcaaacc ggaacaaatc aaactggccg atgatattca tcttgccagc
    48721 tccggctggc cgcaggcgca atggtggaaa caacttaatg acccgcagct ggatgcgctg
    48781 atccaacgga cgctaagtgg ttcacacact cttgcggaag cgaaactgcg ggaagaaaaa
    48841 gcgcagtccc aggccgattt gttagatgcc ggttcacagt tgcaggtggc agcgttaggg
    48901 atgctcaacc gccaacgcgt ctcggcgaac ggctttttaa gcccttatgc gatggatgcg
    48961 ccagcactgg gtatggacgg gccgtactat acggaagcca cagtaggttt gtttgccgga
    49021 ctggatcttg atttgtgggg tgtgcatcgc tcagcggttg ccgccgccat tggcgcgcat
    49081 aatgccgcgc tggcagaaac cgcagcagta gagctatcgc tgaccacggg cgtagcgcag
    49141 ctttattaca gtatgcaggc cagctatcag atgctcgatc tgttataaca aactcgcgat
    49201 atgattgatt acgcggtgaa agcgcaccag agtaaagtgg cgcacggtct ggaagcgcaa
    49261 gtgcctttcc acggcgcgcg ggcacagatt ctggcggtcg ataaacaaat tgctgccgtc
    49321 aaagggcaaa tcaccgaaac gcgagaatct ctgcgtgcat tgattggcgc gggagccagc
    49381 gatatgccgg agatcaaacc tgtaccatta ccacgagtcc agaccggcat tccggcgaca
    49441 ctctcttatg agttgctcgc cagacgcccg gatctgcaag ccatgcgctg gtatgttcag
    49501 gcgtcattag atcaggtgga ttccgctcgg gcgctgttct acccgagctt tgatatcaaa
    49561 gcgtttttcg gccttgatac catccacctg gataccttat tcaaaaaacc agtcgccagt
    49621 tcaacttcat cccgggtctg aaattgccgc tgtttgacgg tggacggttg aatgccaatc
    49681 tcgaaggcac tcgcgccgcc agcaacatga tgattgaacg ttacaaccag tcagtactga
    49741 acgcggtgcg tgacgttgcc gtcaacgaca cgcgtctgca aacgctcaac gacgagcgag
    49801 aaatgcaggc tgaacgcgtg gaagcaacgc gcttcaccca gcgcgctgcc gaggccgcct
    49861 atcagcgcgg cttaaccagc cgcttacagg ccaccgaagc ccggttgcca gtgcttgccg
    49921 aagagatgtc attactgatg ctggacagcc gccgggtgat ccaaagcatt cagttgatga
    49981 aatcgctggg cggcgggtat caggcggctc ccgtcgccga gaaaaaataa aatgtctgcc
    50041 gcgtgatggc tgtcacgcgg tatttcgttt cgtcacgtca aaactgacga cagcctgttt
    50101 ttcgtcagag ttttgaataa atagtgcccg taatatcagg gaatgacccc aaataaaatg
    50161 tggcataaaa gatgcatact gtagtcgaga gcgcgtatgc gtgatttgat taactggagc
    50221 gagaccgatg aaaaaagtcg tcacggtttg cccctattgc gcatcaggtt gcaaaatcaa
    50281 cctggtcgtc gataacggca aaatcgtccg ggcggaggca gcgcagggga aaaccaacca
    50341 gggtaccctg tgtctgaagg gttattatgg ctgggacttc attaacgata cccagatcct
    50401 gaccccgcgc ctgaaaaccc ccatgatccg tcgccagcgt ggcggcaaac tcgaacctgt
    50461 ttcctgggat gaggcactga attacgttgc cgagcgcctg agcgccatca aagagaagta
    50521 cggtccggat gccatccaga cgaccggctc ctctcgtggt acgggtaacg aaaccaacta
    50581 tgtaatgcaa aaatttgcgc gcgccgttat tggtaccaat aacgttgact gctgcgctcg
    50641 tgtctgacac ggcccatcgg ttgcaggtct gcaccaatcg gtcggtaatg gcgcaatgag
    50701 caatgctatt aacgaaattg ataataccga tttagtgttc gttttcgggt acaacccggc
    50761 ggattcccac ccaatcgtgg cgaatcacgt aattaacgct aaacgtaacg gggcgaaaat
    50821 tatcgtctgc gatccgcgca aaattgaaac cgcgcgcatt gctgacatgc acattgcact
    50881 gaaaaacggc tcgaacatcg cgctgttgaa tgcgatgggc catgtcatta ttgaagaaaa
    50941 tctgtacgac aaagcgttcg tcgcttcccg tacagaaggc tttgaagagt atcgtaaaat
    51001 cgttgaaggc tacacgccgg agtcggttga agatatcacc ggtgtcagcg ccagtgagat
    51061 tcgtcaggcg gcgcggatgt atgcccaggc gaaaagcgcc gccatcctgt ggggcatggg
    51121 tgtaacccag ttctaccagg gcgtggaaac cgtgcgttct ctgaccagcc tcgcgatgct
    51181 gactggtaac ctcggtaagc cgcatgcggg tgtaaacccg gttcgtggtc agaacaacgt
    51241 gcagggtgcc tgcgatatgg gcgcgctgcc ggatacgtat ccgggatacc agtacgtgaa
    51301 agatccggct aaccgcgaga aattcgccaa agcttggggc gtggaaagcc tgcctgctca
    51361 taccggttat cgcatcagcg agctgccgca ccgcgcagcg catggcgaag tgcgtgccgc
    51421 gtacattatg ggcgaagatc cgctgcaaac tgacgcggag ctgtcggcag tacgtaaagc
    51481 ctttgaagat ctggaactgg ttatcgttca ggacatcttt atgaccaaaa ccgcgtcggc
    51541 ggcggatgtt attttaccgt caacgtcgtg gggcgagcat gaaggcgtgt ttactgcggc
    51601 tgaccgtggc ttccagcgtt tcttcaaagc agttgaaccg aaatgggatc tgaaaacgga
    51661 ctggcaaatc atcagtgaaa tcgccacccg tatgggttat ccgatgcact acaacaacac
    51721 ctaggagatc tgggatgagt tgcgtcatct gtgcccggat ttctacggtg cgacttacga
    51781 gaaaatgggc gaactgggct tcattcagtg gccttgccgc gatacttcag atgccgatca
    51841 ggggacttct tatctgttta aagagaagtt tgataccccg aacggtctgg cgcagttctt
    51901 cacctgcgac tgggtagcgc caatcgacaa actcaccgac gagtacccga tggtactgtc
    51961 aacggtgcgt gaagttggtc actactcttg tcgttcgatg accggtaact gtgcggcact
    52021 ggcggcgctg gctgatgaac ctagctacgc acaaatcaat accgaagacg ccaaacgtct
    52081 gggtattgaa gatgaggcat tggtttgggt gcactcgcgt aaaggcaaaa ttatcacccg
    52141 tgcgcaggtc agcgatcgtc cgaacaaagg ggcgatttac atgacctacc agtggtggat
    52201 tggtgcctgt aacgagctgg ttaccgaaaa cttaagcccg attacgaaaa cgccggaata
    52261 caaatactgc gccgtgcgcg tcgagccgat cgccgatcag cgcgccgccg agcagtacgt
    52321 gattgacgag tacaacaagt tgaaaactcg cctgcgcgaa gcggcactgg cgtaatacag
    52381 tcctttctac agcctccttt cggaggctgt ttttttatcc attcgaactc tttatactgg
    52441 ttactcccta cccaatcgta ttatcaaaat gaaaaaaatt atcgcattga tgttgttttt
    52501 gacattcttt gcccacgcga acgactccga gcctggcagc cagtatttaa aggcagcaga
    52561 agccggggac cgacgcgcac aatattttct tgccgacagc tggtttagct ccggcgattt
    52621 gagcaaagcc gaatattggg cacagaaagc cgccgacagc ggtgatgctg atgcctgcgc
    52681 gctgttggcg cagatcaaaa tcaccaatcc ggtcagtctg gactatccac aagcaaaagt
    52741 tcttgcagag aaagcggcgc aagcgggcag taaagaaggt gaagtaacgc tggcgcatat
    52801 tctggtaaat actcaagcgg gtaaaccgga ttatccaaag gcgatttcgc tgttagaaaa
    52861 cgcctcggaa gatctggaga atgactccgc cgtcgatgcc caaatgctgc ttggtttgat
    52921 ttacgccaac ggcgtgggca ttaaggccga cgatgacaag gcaacctggt atttcaaacg
    52981 cagctctgca atttcccgaa ccggttattc cgagtactgg gcgggaatga tgttcttaaa
    53041 cggtgaagaa ggttttatcg agaagaacaa acaaaaggcg ctgcactggt tgaacctgag
    53101 ctgtatggaa gggtttgata ccgggtgtga agagtttgaa aaattaacca acggttaaga
    53161 taggcccgat aagacgcggc aagcggcgca tcaggcattc acacattgcc gggtggatat
    53221 ccccggcaat cttcaattat tgatccgcag ttttatcaaa tttgcccagc acttcacgct
    53281 cataagccag cgctttctta cggtcaaatt tgtgttccca cttggcaatc accagcaccg
    53341 ccagcgcatt acccaccaca ttcagcgcag tacgcgccat gtcgaggata cggtcaacac
    53401 cagcaataaa cgccagacct tccagcggaa tacctacgct acccagcgtt gccagcaaca
    53461 ccacaaatga cacgcccggc acgccagcaa tccctttcga ggtcaccatc agcgtcagca
    53521 ccagaatgat ttcctgccag atggacaggt caatgccata cagctgagcg atgaaaatag
    53581 cggcaatact ttgatacagc gtcgaaccat caaggttaaa agagtaaccg gtcggcacca
    53641 cgaagctggt gatcgacgcc ggtgctccgt aggcttccat cttctcaata attcgcggca
    53701 gtacgctttc agagctggca gtggagtacg ccagaatcag ctcatctttc agaatacgaa
    53761 tcaggatcca gacgcttaac ccgcacaggc gcgccacaat tcccagcact accagcgcga
    53821 agaacagaat ggcgaaatgc accagcagca ccagtttcgc cagtggccac agagaagaga
    53881 aaccaaagtt agccaccgtc accgcaatca gcgcaaacac acccaccggc gcataacgca
    53941 tcaccatgtg agttacttta aacatggttt cagagatgga gcggaacacg gtcaccagcg
    54001 gttcacgatg cgtcgcgggc agggaggaaa gccccagacc aaacagcacc gagaaaaaga
    54061 tgatcggcag catttcgcct ttcgccatcg acgccacaat gttcgtcggc accagcgaca
    54121 aaatcgtgcc cataatgccg tgggaactgc tttgtaccgc ttccgtagtg ctctgatatt
    54181 tcgagatatc gacggtcgcc agctgcgaca tatccacccc ggcaccgggc tggaagacgt
    54241 tcgccagagt gatccccaaa atgatggcga cggtggtgat cacctcgaag tagataatgg
    54301 ttttcgcgcc aatacgcccg agctgtttgg catcaccaac acccgcgata cccaccacca
    54361 gcgtggagat cacaatcggc acaacaatca ttttgatcag atggatgaag atatcacccg
    54421 ccggagagag caaattgacg accagccagt cgcggctgtc gctatggtag tgcaggtagc
    54481 ttcccaggag aatgcccagc accatagcaa acagaatctg ccaggccaag ctgaatttta
    54541 tatttttcat cagaataact tcctcaatgg agcgccgttc cccgttcaga aacgcgagaa
    54601 cgtgacatac tgccagggca tgaattgtgt tgcgttggtt tgtagatttt tttaacgctt
    54661 atgatcagta tcatttgcgc ggtatgttgc gcaacccttt aacaacagag cttttcgctg
    54721 cattaatgca taataacgcg agtttatggc aggattaatg aataaccatt tgttatggaa
    54781 agatttttat ttgtttaatc tgcaataata ctgattagtg attatttttg gcatatgttc
    54841 attcgattat tttttatgca gctcaacgac ataatcttca tcaccagatg attaatccga
    54901 tctccgctgc aacagtttcg ccatattaat cgactcgacc agctgtgtcc ggttgatccg
    54961 gggtgagttg agatccatca ctttttgcca tagttcgatg gcttgcgcgt aattcgcctg
    55021 cataaacgca tcggaagcca gcagcatcag agcggtgatt tcgttaaagt ccagcgcgag
    55081 agctttgtcg atcattgcgc gagtctgggc ggtcatatgc tggctggcct ggtaataaag
    55141 caccgtcgcc agcgccgcat acagttcagc gttctcacca cgtagttgca acgcctgacg
    55201 atacgccagc agcgaattgc tgtaatcgtt ttgccacaga tagtactcgc ccagtaacgc
    55261 ccactgttcg ctgttttgtg gattagcgcg gattttatcc tgtaatgcct gaagctgcac
    55321 ttccggggtt tgctggctgg caaactgatg tagcggatcg cgctgacgct gatactccgc
    55381 acgtaccgcc tgccattttg ggcttaacag ataactgccg acacagagaa ataccatcaa
    55441 tatcgtgagt gttgtcagca ttttcaccgg tatttgaggc tgtttcatcg cttcgccctc
    55501 actcgccaga ggatcagtgc catcagcagt aacaacacca ctggcagcgc ccacaacacc
    55561 agcgtctgac ccgttaacgg tgggttatag cgaacaaaat ctccgtagcg ttcggtcatc
    55621 cagccaatga tttcgacttc gttcttcccc tccgccacca tgctgtaaac ctgatggcgc
    55681 atactgaccg ccaccggcgc gttggattcc agtaagtttt gattctggca ctgcggacaa
    55741 cgtaactggc tggcaatatt taacgcctgt tgctgttgtt gcggattggc gaattgccag
    55801 gtgtctacga cctgagcgcg cgcaaaacag gtaaataaca gcagtagcgt gagaagccct
    55861 ttattcatcg cgcttcttcc cccgccatcc gcttaacaat gcgcccgcaa tcatcaacaa
    55921 tcctcccccc cagatccagc gcacaccgct ttgtacatac aaacgaaaag cgtaacgatc
    55981 cggcccagtt ttctccccca tgaccgcata ccagtcatgg atgccgttcc agcgaattga
    56041 cggttccatc atttgttgac ggcgtgcttc ataaaaacgc cgctccggcg tcagttcacc
    56101 aatacgttgc cgatggtcaa acagtgccac tatcgctttt tcgctggtgt aattgcctct
    56161 ggcttgcaga tcgaggcgct caaaacggaa ggtgtatcct gccagcgtca cctgctgacc
    56221 cggctgtaaa ttcaggctga tctcctgacg actgacgctg gaaaccacga tccccgcggc
    56281 aaataacagc acgcccgcat gagctaccag cgccggaagc tgcgcgcgtt tgccagagac
    56341 aaacctcgcc agcacaatca ccaccagcat caacagacca aacggtaacg tcgcgcggtt
    56401 aaaatacggc gcgccaacgg agaggcgtcc ccagcccagc aggccgtaaa tcatcggata
    56461 aagcgttccc accagcacga tcagtagcac tgcgcaaaac agcaacagcg tagcgaggat
    56521 taacatttcc cgcgataaca ccgaaaaacg caccgccggg ccaccgtccc gcgctcgcca
    56581 gccatacaga gccagagacg caaggctaat cagtgcaaac aggctgaaca acggcacggc
    56641 gcggacgtta tccagcgcga acgcatgaac cgaaaccaga atgccagaac ggacaattaa
    56701 ggtgcccagc agcgacagca tcagagtaac tatcgccagc aacagcgacc agtggcaaaa
    56761 aatcccccgc tggcgtgtca gggataaact gtgcagcagc gcagtggcag aaagccaggg
    56821 taataaagag gcattttcca ccggatccca gaaccaccag ccgcccaagc cgagttcgca
    56881 gtaggcccac caggaaccga ggatgatccc cgccgttaat gcactccagc caggtaacgc
    56941 ccagcgccag caaattcggg cgctggccgc atcaaactcg ccgcgcagta aactcgccag
    57001 cgccacgctc gccgccacca tcaaaccgcc atagccgaga taaagcagcg gtggatgaaa
    57061 gataagaccg ggatgttgca gcatcggatt gagatcgcgg ccttcgattg ctggtggaaa
    57121 tatccgcacg aagggatcgg accacagcac cacaaacagt agcagtgcgg cgagcatgag
    57181 agataaaacg gctaacgtca gcggaaatag cggatcgctt tgctgccgat aatgccaggc
    57241 aaacagcgcg ctccaggcgg aaagcagcag cacccaaagc agcagcgaac cttcatggcc
    57301 gccccacacc gctgccagct tgagttccca cgacagcagg ctatagctat gttgcgcgac
    57361 ataaatgacc gagaaatcgc tgatgagaaa acaatacgtc agtacgccaa aggcgagcag
    57421 caggaacgcg aactgcgcca gaatgccgat gcaagtgagt cgcatcatgg caggccagcg
    57481 caaccgcact cccgcgaagg ccgtcaacgg ggtcaacacg ttgaccccga gacttaacaa
    57541 caacgccaga aaaccgactt caggaaggaa tacgtccaga aaccacctct tttctggctt
    57601 acgccaccgt caactgtccg gcgtagagaa tgaaaaagcg cagcatcaac acgccgacca
    57661 gactggcccc acacgccgcc agcacggcag gaatgccgga actgcgattg acccacggtt
    57721 tgagcaacat tggcacaatc agccccagcc cggcgacacc aagccagaac caccacgtcc
    57781 agaaaccgcc acctaatgcc gccaccagcg cacgaacttt accgtcatcg cccagggcca
    57841 gtccgacgaa aaacgccacc agcaggaaga tttcgcccca taccacgggg atttccatac
    57901 ggtgtacaaa gtgcgcttcc gtggaatgcg gatttttgcg ttggcgtatc gccatggcga
    57961 tcagcgctac cgccgcaccg gacgagatgc cggagaagag gaacagcacc ggcaggatcg
    58021 ggttattgag gaacggatac gatttcagcg ccgacagcag aaagccggta taagccccca
    58081 gcagcaccgc caacaccagc atcagcgttt ccagtccgcg atgaacgggc gtcagcaggc
    58141 tcagaacctt ttgcacgatc cccagcttcg gcaaccagcg ttgttgcagg gcaagcaaat
    58201 catgttcaaa gattttcgcc agccacagca ccagcaccac catgtagagc tgaaacagca
    58261 tcacccccat cgacatcacc gaggtaaaac tgtagtggaa catcagcttc cagaaggtcc
    58321 acggtcttgt caggtggaag acgaggatca acagcccgag gatcaccgcg cccggcccga
    58381 caatcagcgt ggtgcgcagc aacgtactgt ctgcaccgcc cgcctgcggg tagaagcgac
    58441 gtaacagcac ggtcagcgtc accagaccgg cagaaatacc aatcaaaaac aggtagatgg
    58501 caatcggcca gtcccacacc agcgattcaa aatgaaatgc ggaagtctgc gtcattggct
    58561 cacctccccg tatttaaacg gtacgcggta cagcttcggt ttggttccca gcgccagctt
    58621 gtagcggtaa gtaggcttct ggcgcagcag ttgcgaaatc tcactgttag gatcgtccag
    58681 attgccaaac gtcagcgcct tcgtcgggca agcctcaacg cacgcgggca gcttaccggc
    58741 ctgcaaattg gtcttacggc agaaatcgca tttgtccgcc gtcttcgtga ccggatggat
    58801 aaagcgcacg cggtacggac aggcggcgat gcagtactga caaccgacgc agagatcagg
    58861 attaacatcg acaatcccgc tagcggcatc acgaaaagac gcaccggtcg ggcagacgtc
    58921 aacgcacggc gcatgatcgc agtgctggca agacttacgg aagaagcgat atttcacatc
    58981 aggaaattcg ccctgcggct cgctacgaat aatcgtcagg cgcgagacgc cttccggcac
    59041 cttgttcact tcccgacaag catccataca ggcggtacag ccgatgcata acgactcgtc
    59101 atgcaccatg ccgtaacgca ccccattgat attcaatgtt ttcgccacca cgcgtcctgc
    59161 ggtgccgctg acggctgcca gcacgccgac gccggtgaga aactggcgac gagaccaggt
    59221 catggctgct ccttaagcaa cggaacagac gccgggttaa agttcggatt ggtgcgctga
    59281 tcgctgtggc aatcgacgca aatcttaatc cgtcctttgt cacttaacgt ctgcatcgta
    59341 tcttgctgtg gatgcaggga atggcaactg gcgcacgcca ctttggttac gtggacatcg
    59401 tgcggccaga acgctttttg caactgttcc ggcagatgac aggacataca gacgctgttc
    59461 tgctctccaa ccttgtacat cggctcgtta aagcgcatca catctttcac cccttcgcgg
    59521 tgttgcggtg atggctggcc gtgacagttg gtgcaggtga ccggcagttt gttattcggg
    59581 ttgataacgg aagcatgttt gccatgcata ccttcggtat ctggcttatg acagtccaga
    59641 caggcggcat ccgggttacg ctgctgggta acttcgtagc gatcaccaga tgcctgcgcc
    59701 gcaggggtag cggtaattcc gttcaggctc cacaacaggc ccgacgccag caccccagca
    59761 gttaataacg aacgtaatac gctcatattc actccattgt gttttccgcc ccttgcgagg
    59821 cggaacgggg ttattggctt aacagaccgt ttttacgtgc ctgctcttcc cactgcggga
    59881 tcaccgtttt gatgaagtcc tgcttctcgg ccttgatttg ttccatgttc aggccaatgg
    59941 cctgctgagc tttctctttg gtcgagatat ccgggatctg gatttcatgg gtgatgcctt
    60001 tggtcgccag caggcgcgcc agtttagtgc gcgcatccgc cgctttatcc atcgccgtac
    60061 cgagcatcct cagaccttct tccggtgcgt gcatatgaat gccgtgggaa gcgatcgcca
    60121 gatcccaacg ccactgggca tgacggatat cgtcctgaat tggcttcatt tcggcttccg
    60181 tcgcgcctgc atccagcgcc gctttcgctt cgaagtgagc gtgaaccagt tgatcttcaa
    60241 ccttgatttt caggtcgtta atcgactgct tacgttccgc gaccactttt tgcaaggcag
    60301 ctttgtcctg ggtatggcag ttcgcacaag tctgggcgaa gttatcaaac ggattaccaa
    60361 ttttatggtc ggtgtagagt ttgccttcgg cgttctgcac ttttggcata tggcagtcga
    60421 tacaggtcac gttgttttta ccgtgaatgc ccgctgtcca ggtttcatat tccgggtgct
    60481 gcgctttcag cattggcgtt ttcgacaggg agttagtcca gtcagagaag gcaattttgt
    60541 cgtaatactg ctccatattt tcgactttca tgccgtcatc ccacgggaat ttaaccgctt
    60601 tgtttttgcc gtcgaagtaa tactccacat ggcactgacc gcaaaccatc gattgctggt
    60661 cgaaacgtcc ggctttctca aaaggtttac caatggcttc catcgcgcga gccgcatacg
    60721 gacgggaaag ggttaactcc ggtttgcctt tggcgaactc tggtgaggcg gtgttatggc
    60781 aatcggcaca acctaagtta ttgacgattt ccgggccgcc gcgcgcccat ttaccgtgga
    60841 agtagccatc ttcgccgtct ttctggatca gacgcgccac atccgggctt ttacaactcc
    60901 agcacgccat cggtagcgga ccatcttcag cgtttttcgg cgcaccggta cgcagggttt
    60961 cacgcacatc ggtcacagca aaggcatgtc cacgcgactt gttgtaatcg cgcgagaagg
    61021 gataccccgc ccacaggatc accaaccgtg gatcttccgc cagggcgtca acacgctctg
    61081 actgttccga ggtggctttc caagagagat attgatcggg atgctgcggg gcaaaggttt
    61141 cattcttcgc ttccacagtt acaggttttg cgggagcagc cgtttgttca gcgtgaacag
    61201 aagtgaaaaa gaaaaaagga atcaataagc tgaagatacg gcgtgcgttt atttttatcc
    61261 ttgtcatagg ggcttcatcc gaattgcgcc attgttgcaa tggcggtttt tattgttttt
    61321 cacgacagta accgcaccta cactgtcatg acattgctcg cccctatgtg taacaaataa
    61381 ccacactatg aatgttgtct ttaatcaatt gtaagtgcat gtcaaatacc actttagagt
    61441 tagtcagtat cttcctcttt ttcaacagca tgcataactg catgttcctc aaagaattaa
    61501 tcaacttttg ttgctgacct tcaaaaatta ccctgccgtt tatttgcaca attctacttt
    61561 tgcgtgatct gtcgcccaaa tactaaacaa aactgccaat acccctacat ttaacgctta
    61621 tgccacatat tattaacatc ctacaaggag aacaaaagca tgagccaaat tcacaaacac
    61681 accattcctg ccaacatcgc agaccgttgc ctgataaacc ctcagcagta cgaggcgatg
    61741 tatcaacaat ctattaacgt acctgatacc ttttggggcg aacagggaaa aattcttgac
    61801 tggatcaaac cttaccagaa ggtgaaaaac acctcctttg cccccggtaa tgtgtccatt
    61861 aaatggtacg aggacggcac gctgaatctg gcggcaaact gccttgaccg ccatctgcaa
    61921 gaaaacggcg atcgtaccgc catcatctgg gaaggcgacg acgccagcca gagcaaacat
    61981 atcagctata aagagctgca ccgcgacgtc tgccgcttcg ccaataccct gctcgagctg
    62041 ggcattaaaa aaggtgatgt ggtggcgatt tatatgccga tggtgccgga agccgcggtt
    62101 gcgatgctgg cctgcgcccg cattggcgcg gtgcattcgg tgattttcgg cggcttctcg
    62161 tcggaagccg ttgccgggcg cattattgat tccaactcac gactggtgat cacttccgac
    62221 gaaggtgtgc gtgccgggcg tagtattccg ctgaagaaaa acgttgatga cgcactaaaa
    62281 aacccgaacg tcaccagcgt agagcatgtg atggtactga agcgtactgg cggaaacatc
    62341 gactggcagg aagggcgcga cctgtggtgg cacgacctgg ttgagcaagc cagcgatcag
    62401 caccaggcgg aagagatgaa cgccgaagat ccgctgttta ttctctatac ctccggttct
    62461 accggaaaac caaaaggcgt actgcacact accggcggtt atctggtgta cgcggcgctg
    62521 acctttaaat atgtctttga ttatcatccg ggcgatatct actggtgcac cgccgatgtg
    62581 ggctgggtga ccggacacag ttatttgctg tacggcccgc tggcctgcgg cgcgaccacg
    62641 ctgatgtttg aaggcgtacc caactggccg acgcctgccc gtatggcgca ggtggtggac
    62701 aagcatcagg tcaatattct ctataccgca cccacggcga tccgcgcgct gatggcggaa
    62761 ggcgataaag cgattgaagg caccgaccgt tcgtcgctac gcattctcgg ttccgtgggc
    62821 gagccaatta acccggaagc gtgggagtgg tactggaaaa aaatcggcaa cgagaaatgt
    62881 ccggtggtcg atacctggtg gcagaccgaa actggcggtt tcatgatcac gccgctgcct
    62941 ggcgctaccg agctgaaagc cggttcggca acacgtccgt tcttcggcgt gcaaccggcg
    63001 ctggtcgata acgaaggtaa cccgctggaa ggcgctaccg aaggcagcct ggtgatcacc
    63061 gactcctggc cgggtcaggc gcgtacgctg tttggcgatc acgaacgttt tgaacagacc
    63121 tacttctcca ccttcaaaaa tatgtatttc agcggcgacg gcgcgcgtcg cgatgaagat
    63181 ggctattact ggataaccgg acgcgtggac gacgtgctga acgtctctgg tcaccgtctg
    63241 gggacggcgg agatagagtc ggcgctggtg gcgcatccga agattgccga agccgccgta
    63301 gtaggtattc cgcacaatat taaaggtcag gcgatctacg cctacgtcac gcttaatcac
    63361 ggggaggaac catcaccaga actgtacgca gaagtccgca actgggtgcg taaagagatt
    63421 ggcccgctgg cgacgccaga cgtgctgcac tggaccgact ccctgcctaa aacccgctcc
    63481 ggcaaaatta tgcgccgtat tctgcgcaaa attgcggcgg gcgataccag caacctgggc
    63541 gatacctcga cgcttgccga tcctggcgta gtcgagaagc tgcttgaaga gaagcaggct
    63601 atcgcgatgc catcgtaacc cacaattgcc ggatgcggcg tataacgcct tatccggcct
    63661 acattcggca agggttaccc gagcgttaac cttctcccat aagggagcgg gaattaaaac
    63721 aatccctaca ttacctctgg agaatctgtg atgaatggta cgatttatca gcggatagaa
    63781 gacaatgcgc atttcaggga gttagtcgaa aaacggcaac ggtttgccac catcctgtcg
    63841 attattatgc tggcagttta tatcggcttt attttactga tcgccttcgc gcccggctgg
    63901 ctgggcacgc cgctgaatcc gaacaccagc gtcacacgcg gtattccaat tggtgttgga
    63961 gtgattgtga tctcctttgt tctcaccggt atctacatct ggcgggcgaa cggcgaattc
    64021 gaccgtctta ataatgaagt cctgcatgag gtacaagcat catgaaaaga gttctgacgg
    64081 cgcttgccgc cacactccct ttcgcagcta acgccgcgga tgctattagc ggggccgtag
    64141 agcgccagcc aacgaactgg caggcgatta ttatgttcct gattttcgtc gtgtttacgc
    64201 tcggcattac ctactgggca tcaaaacgcg tacgttctcg tagcgactac tacacggcag
    64261 gcggcaatat cacaggcttc cagaacgggc tggcgattgc cggtgactat atgtccgccg
    64321 cctcattctt ggggatctct gcgctggtgt ttacctccgg ctatgatggc ttaatttact
    64381 cgctgggctt cctggtaggc tggccgatca ttctgttcct gattgccgaa cgtctgcgta
    64441 acctggggcg ttacaccttt gccgatgtgg cctcttaccg cctgaaacaa gggccgattc
    64501 gtattctttc ggcctgtggt tctctggtgg tggtggcgct ttaccttatc gcccagatgg
    64561 tgggcgcagg taaactgatc gagctgttgt ttggccttaa ctatcacatt gcggtagtgc
    64621 tggtcggcgt gctgatgatg atgtacgtcc tgttcggcgg tatgctggca accacctggg
    64681 tgcaaattat taaagccgtg ctgttgctgt tcggtgccag ttttatggcc tttatggtga
    64741 tgaaacacgt cgg
//
LOCUS       DAJVTL010000003        62946 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.003, whole genome shotgun sequence.
ACCESSION   DAJVTL010000003 DAJVTL010000000
VERSION     DAJVTL010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 62946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 62946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..62946
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.003"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..160
                     /locus_tag="OQQ26_000151"
     CDS             <1..160
                     /locus_tag="OQQ26_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HCS1855772.1"
                     /translation="WQLAHSSADNFPALTVSHFITANLLPVMLGNIIGGAVLVSMCYR
                     AIYLRQEP"
     gene            complement(198..1259)
                     /locus_tag="OQQ26_000152"
     CDS             complement(198..1259)
                     /locus_tag="OQQ26_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCS1855773.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
                     AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
                     TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
                     EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVIHAWPDGQIAQE"
     gene            1472..2935
                     /gene="bepA"
                     /locus_tag="OQQ26_000153"
     CDS             1472..2935
                     /gene="bepA"
                     /locus_tag="OQQ26_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HCS1855774.1"
                     /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTL
                     SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYSDNESQLTSVMAHEISHVTQRHLARAMEDQQRSAPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
                     PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
                     AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARQTLQP
                     LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
                     QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
                     SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
     gene            2956..3315
                     /gene="arsC"
                     /locus_tag="OQQ26_000154"
     CDS             2956..3315
                     /gene="arsC"
                     /locus_tag="OQQ26_000154"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311384.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HCS1855775.1"
                     /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
                     LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN
                     GKARIGRPPEQVLEIVG"
     gene            complement(3453..4199)
                     /gene="hda"
                     /locus_tag="OQQ26_000155"
     CDS             complement(3453..4199)
                     /gene="hda"
                     /locus_tag="OQQ26_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HCS1855776.1"
                     /translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
                     LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
                     EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
                     GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
                     LFMTLDQLDRASITAQRKLTIPFVKEILKL"
     gene            complement(4249..5538)
                     /gene="uraA"
                     /locus_tag="OQQ26_000156"
     CDS             complement(4249..5538)
                     /gene="uraA"
                     /locus_tag="OQQ26_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HCS1855777.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKVGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII
                     ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
                     YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
                     SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
                     GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
                     ALATIVGIGLSLIFKLISVLRPEEVVLDAEDADITDK"
     gene            complement(5624..6250)
                     /gene="upp"
                     /locus_tag="OQQ26_000157"
     CDS             complement(5624..6250)
                     /gene="upp"
                     /locus_tag="OQQ26_000157"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HCS1855778.1"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            6575..7612
                     /gene="purM"
                     /locus_tag="OQQ26_000158"
     CDS             6575..7612
                     /gene="purM"
                     /locus_tag="OQQ26_000158"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HCS1855779.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL
                     ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW
                     PEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            7612..8250
                     /gene="purN"
                     /locus_tag="OQQ26_000159"
     CDS             7612..8250
                     /gene="purN"
                     /locus_tag="OQQ26_000159"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HCS1855780.1"
                     /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
                     RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
                     TEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE"
     gene            8422..10488
                     /gene="ppk1"
                     /locus_tag="OQQ26_000160"
     CDS             8422..10488
                     /gene="ppk1"
                     /locus_tag="OQQ26_000160"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HCS1855781.1"
                     /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
                     IIRSDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMVDREIANAQQELPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
                     CSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
                     ATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
                     SLEQPE"
     gene            10493..12034
                     /gene="ppx"
                     /locus_tag="OQQ26_000161"
     CDS             10493..12034
                     /gene="ppx"
                     /locus_tag="OQQ26_000161"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HCS1855782.1"
                     /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
                     KRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
                     TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
                     RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSSLHRHSAYILQNS
                     DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
                     PEIAA"
     gene            complement(12073..14310)
                     /gene="pdeF"
                     /locus_tag="OQQ26_000162"
                     /pseudo
     CDS             complement(12073..14310)
                     /gene="pdeF"
                     /locus_tag="OQQ26_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416998.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeF"
     gene            complement(14492..14644)
                     /locus_tag="OQQ26_000163"
     CDS             complement(14492..14644)
                     /locus_tag="OQQ26_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855783.1"
                     /translation="MSHAVDGTYIKAQQDKMVNSSLCKKASVDTYFNVMEVNLIIYND
                     DVIMMN"
     gene            14662..14853
                     /locus_tag="OQQ26_000164"
     CDS             14662..14853
                     /locus_tag="OQQ26_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2633 family protein"
                     /protein_id="HCS1855784.1"
                     /translation="MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHH
                     QSKKEAQQSTLSVESPVQR"
     gene            15164..15682
                     /locus_tag="OQQ26_000165"
     CDS             15164..15682
                     /locus_tag="OQQ26_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HCS1855785.1"
                     /translation="MMKFKKCLLPVAMLASFTLAGCQSNADDHAADVNQTDQLNTKQE
                     TKTVNIISILPAKVAVDNSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVG
                     GGAVGAAAGSMVNDKTLVEGVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNET
                     RIQPNTKCPEKS"
     gene            15698..16237
                     /locus_tag="OQQ26_000166"
     CDS             15698..16237
                     /locus_tag="OQQ26_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5384 family protein"
                     /protein_id="HCS1855786.1"
                     /translation="MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQH
                     DEWVAERNREIQQEKQRRANAQAAANKRAATAAANKKARQDKLDAEATADKKRDQSYE
                     DELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGR
                     DLMKSVGKAEENKSDSWFN"
     gene            complement(16332..17909)
                     /gene="guaA"
                     /locus_tag="OQQ26_000167"
     CDS             complement(16332..17909)
                     /gene="guaA"
                     /locus_tag="OQQ26_000167"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HCS1855787.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA
                     SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(17978..19444)
                     /gene="guaB"
                     /locus_tag="OQQ26_000168"
     CDS             complement(17978..19444)
                     /gene="guaB"
                     /locus_tag="OQQ26_000168"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HCS1855788.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLSQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
                     RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
                     NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
                     VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
                     DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
     gene            19606..20976
                     /gene="xseA"
                     /locus_tag="OQQ26_000169"
     CDS             19606..20976
                     /gene="xseA"
                     /locus_tag="OQQ26_000169"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HCS1855789.1"
                     /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
                     QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPAIIYPTAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
                     ARQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
                     KRAGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAEILRAQLSATRERFGNAVTH
                     LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK
                     SRKKVH"
     gene            complement(20973..21188)
                     /locus_tag="OQQ26_000170"
     CDS             complement(20973..21188)
                     /locus_tag="OQQ26_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417005.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HCS1855790.1"
                     /translation="MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVL
                     KACGAVDYFCQHGHGLISKKRVEFVLA"
     gene            complement(21257..22729)
                     /gene="der"
                     /locus_tag="OQQ26_000171"
     CDS             complement(21257..22729)
                     /gene="der"
                     /locus_tag="OQQ26_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417006.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HCS1855791.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
                     EDHQPPLLRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
                     SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK"
     gene            complement(22847..24025)
                     /gene="bamB"
                     /locus_tag="OQQ26_000172"
     CDS             complement(22847..24025)
                     /gene="bamB"
                     /locus_tag="OQQ26_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HCS1855792.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
                     TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNVDDGKEIWSVSLAEKDG
                     WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSSPVVSDG
                     LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
                     VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTQWTQSDLLHRLLTSPVLYN
                     GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
                     "
     gene            complement(24036..24656)
                     /gene="yfgM"
                     /locus_tag="OQQ26_000173"
     CDS             complement(24036..24656)
                     /gene="yfgM"
                     /locus_tag="OQQ26_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ancillary SecYEG translocon subunit YfgM"
                     /protein_id="HCS1855793.1"
                     /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS
                     HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
                     ELEKAAAQLQQGLADTSDENLKAVINLRLARIQVQLKQADAALKTLDTIKGEGWAAIV
                     ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
     gene            complement(24674..25948)
                     /gene="hisS"
                     /locus_tag="OQQ26_000174"
     CDS             complement(24674..25948)
                     /gene="hisS"
                     /locus_tag="OQQ26_000174"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HCS1855794.1"
                     /translation="MAKNIQAIRGMNDYLPGETTIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL
                     LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLV
                     ASGADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
                     ANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            complement(26059..27177)
                     /gene="ispG"
                     /locus_tag="OQQ26_000175"
                     /gene_synonym="gcpE"
     CDS             complement(26059..27177)
                     /gene="ispG"
                     /locus_tag="OQQ26_000175"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HCS1855795.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK"
     gene            complement(27204..28217)
                     /gene="rodZ"
                     /locus_tag="OQQ26_000176"
     CDS             complement(27204..28217)
                     /gene="rodZ"
                     /locus_tag="OQQ26_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HCS1855796.1"
                     /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
                     GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
                     DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF
                     SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
                     PAQ"
     gene            complement(28502..29656)
                     /gene="trmG/rlmN"
                     /locus_tag="OQQ26_000177"
     CDS             complement(28502..29656)
                     /gene="trmG/rlmN"
                     /locus_tag="OQQ26_000177"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HCS1855797.1"
                     /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ
                     VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
                     RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
                     AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
                     LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
                     IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYERSSNSRIDRFSKVL
                     MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
     gene            complement(29806..30237)
                     /gene="ndk"
                     /locus_tag="OQQ26_000178"
     CDS             complement(29806..30237)
                     /gene="ndk"
                     /locus_tag="OQQ26_000178"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HCS1855798.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
     gene            complement(30386..32698)
                     /gene="pbpC"
                     /locus_tag="OQQ26_000179"
     CDS             complement(30386..32698)
                     /gene="pbpC"
                     /locus_tag="OQQ26_000179"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417014.1"
                     /note="penicillin-binding protein 1C; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase PbpC"
                     /protein_id="HCS1855799.1"
                     /translation="MPRLLTKRGCWITLATAPFLLFLAAWGADKLWPLPLHEVNPARV
                     VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA
                     AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLY
                     LNRAPFGGTLQGIGAASWSYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAA
                     RNKVLERMAAQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTL
                     DAGLQRRLEELAQNWKGRLPARSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV
                     NAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA
                     LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA
                     AYTAFARHGKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPL
                     AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLS
                     RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG
                     INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTICP
                     PYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRN
                     VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ"
     gene            complement(32699..37660)
                     /gene="yfhM"
                     /locus_tag="OQQ26_000180"
     CDS             complement(32699..37660)
                     /gene="yfhM"
                     /locus_tag="OQQ26_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha2-macroglobulin"
                     /protein_id="HCS1855800.1"
                     /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN
                     ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH
                     VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT
                     TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN
                     SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG
                     RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA
                     TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG
                     PRDLYRPGETVILNGLLRDADGKALPDQPIKLDVIKPDGQVLRSVVSQPENGLYHFTW
                     PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLMPKDEVKFSV
                     VGYYLYGAPANGNTLQGQLFLRPLRDAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK
                     GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPADALPGIRPQFASK
                     SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVCLIRERRDYYWNWSE
                     DEGWQSQFDQKDLIENEQTLDLQADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG
                     YSWQDNSDGSGTVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW
                     QEIDVPAQGQDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGVLHLPLGDEN
                     RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP
                     WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPPVNHVNIVAQQA
                     LPVTFNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF
                     MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR
                     VLPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGEIWAI
                     PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA
                     QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVLDFLV
                     RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ
                     KAPLGALREIWEHRADAASGLPLLQLGVALKTMGDATRGEEAIVLALKTPRNSDERIW
                     LGDYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAAR
                     TIQDLPGKWQAQTSFSAEPLTGEKAQNSNLNSDQLATLQVSNSGDQPLWLRVDASGYP
                     QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP
                     AGLELENQNLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV
                     TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP"
     gene            37867..38712
                     /gene="sseA"
                     /locus_tag="OQQ26_000181"
     CDS             37867..38712
                     /gene="sseA"
                     /locus_tag="OQQ26_000181"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HCS1855801.1"
                     /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN
                     GHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAP
                     RAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVDLPEGEFNAAFNPEAVVKVTDV
                     LLASHENTAQLIDARPAARFNAEVDEPRPGLRHGHIPGALNVPWTELVREGELKTTDE
                     LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP
                     VEPVK"
     gene            complement(39050..39136)
                     /locus_tag="OQQ26_000182"
                     /pseudo
     CDS             complement(39050..39136)
                     /locus_tag="OQQ26_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311415.2"
                     /note="enhances serine sensitivity caused by inhibition of
                     homoserine dehydrogenase I; incomplete; partial in the
                     middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
     gene            complement(39733..40509)
                     /gene="sseB"
                     /locus_tag="OQQ26_000183"
     CDS             complement(39733..40509)
                     /gene="sseB"
                     /locus_tag="OQQ26_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311415.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HCS1855802.1"
                     /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLGSTVWVPGTAAQGE
                     AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEITLGETL
                     FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEVLEGGESLILSEVAEPPAQMIDSLTT
                     LFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQAAGSVATDTLPGDEPID
                     ICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII"
     gene            complement(40652..41935)
                     /gene="pepB"
                     /locus_tag="OQQ26_000184"
     CDS             complement(40652..41935)
                     /gene="pepB"
                     /locus_tag="OQQ26_000184"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HCS1855803.1"
                     /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
                     QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDN
                     RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
                     HTVGRGSERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
                     DAEGRLVLADGLIDASAQKPELIIDAATLTGAAKTALGNDYHALFSFDDALAARLLAS
                     ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
                     LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
     gene            complement(41993..42193)
                     /gene="iscX"
                     /locus_tag="OQQ26_000185"
     CDS             complement(41993..42193)
                     /gene="iscX"
                     /locus_tag="OQQ26_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HCS1855804.1"
                     /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
                     DPQASNEKILEAILLVWLDEAE"
     gene            complement(42205..42540)
                     /gene="fdx"
                     /locus_tag="OQQ26_000186"
     CDS             complement(42205..42540)
                     /gene="fdx"
                     /locus_tag="OQQ26_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HCS1855805.1"
                     /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
                     YTINHAREH"
     gene            complement(42542..44392)
                     /gene="hscA"
                     /locus_tag="OQQ26_000187"
     CDS             complement(42542..44392)
                     /gene="hscA"
                     /locus_tag="OQQ26_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HCS1855806.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
                     LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKI
                     ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
                     VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
                     LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
                     IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAA
                     AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV"
     gene            complement(44409..44924)
                     /gene="hscB"
                     /locus_tag="OQQ26_000188"
     CDS             complement(44409..44924)
                     /gene="hscB"
                     /locus_tag="OQQ26_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HCS1855807.1"
                     /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ
                     LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
                     DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNEAWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            complement(45020..45343)
                     /gene="iscA"
                     /locus_tag="OQQ26_000189"
     CDS             complement(45020..45343)
                     /gene="iscA"
                     /locus_tag="OQQ26_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HCS1855808.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
                     ESFHV"
     gene            complement(45360..45746)
                     /gene="iscU"
                     /locus_tag="OQQ26_000190"
     CDS             complement(45360..45746)
                     /gene="iscU"
                     /locus_tag="OQQ26_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HCS1855809.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            complement(45774..46988)
                     /gene="iscS"
                     /locus_tag="OQQ26_000191"
     CDS             complement(45774..46988)
                     /gene="iscS"
                     /locus_tag="OQQ26_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HCS1855810.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHCFG
                     WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
                     QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
                     LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
                     PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            complement(47100..47588)
                     /gene="iscR"
                     /locus_tag="OQQ26_000192"
     CDS             complement(47100..47588)
                     /gene="iscR"
                     /locus_tag="OQQ26_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HCS1855811.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL
                     RA"
     gene            complement(47913..48650)
                     /gene="trmJ"
                     /locus_tag="OQQ26_000193"
     CDS             complement(47913..48650)
                     /gene="trmJ"
                     /locus_tag="OQQ26_000193"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HCS1855812.1"
                     /translation="MLQNIRIVLVETSHTGNIGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGNKA"
     gene            48769..49572
                     /gene="suhB"
                     /locus_tag="OQQ26_000194"
     CDS             48769..49572
                     /gene="suhB"
                     /locus_tag="OQQ26_000194"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HCS1855813.1"
                     /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
                     KAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
                     IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            49717..50571
                     /locus_tag="OQQ26_000195"
     CDS             49717..50571
                     /locus_tag="OQQ26_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708373.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1855814.1"
                     /translation="MALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
                     DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP
                     ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA
                     NILDVIGQGDREGIRAVILDSTFASYATIANQMIPGSGYLLDERYSGENYIASVSPIP
                     LLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGNVYREQMVDFI
                     LSALNPQN"
     gene            50762..52042
                     /gene="csiE"
                     /locus_tag="OQQ26_000196"
     CDS             50762..52042
                     /gene="csiE"
                     /locus_tag="OQQ26_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HCS1855815.1"
                     /translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDD
                     DIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI
                     TSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCL
                     LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML
                     RVPDPLRDAHQRDKQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLF
                     AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN
                     DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP
                     YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA"
     gene            complement(52034..53173)
                     /locus_tag="OQQ26_000197"
     CDS             complement(52034..53173)
                     /locus_tag="OQQ26_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HCS1855816.1"
                     /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
                     LGAGLVARFLGSLLIAPRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIG
                     FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVIL
                     VLLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAH
                     AAYYGFSAIYWQAAGYSASAVGFLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
                     GVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
     gene            complement(53333..54223)
                     /gene="hcaR"
                     /locus_tag="OQQ26_000198"
     CDS             complement(53333..54223)
                     /gene="hcaR"
                     /locus_tag="OQQ26_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HcaR"
                     /protein_id="HCS1855817.1"
                     /translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG
                     VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEV
                     NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF
                     DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNI
                     VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM
                     KPALRDFIAIVQERLASVTA"
     gene            54359..55720
                     /locus_tag="OQQ26_000199"
     CDS             54359..55720
                     /locus_tag="OQQ26_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HCS1855818.1"
                     /translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL
                     FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRA
                     FTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA
                     PGLRDYLGDIAWYLDGMLDRRESGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSH
                     ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV
                     DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE
                     VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL
                     CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE
                     VMK"
     gene            55717..56235
                     /locus_tag="OQQ26_000200"
     CDS             55717..56235
                     /locus_tag="OQQ26_000200"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HCS1855819.1"
                     /translation="MSAQVSLELHHRISLFLFHEASLLDDWKFRDWLAQLDEEIRYTM
                     RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNC
                     QVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ
                     AVITSHNLSVLF"
     gene            56235..56555
                     /locus_tag="OQQ26_000201"
     CDS             56235..56555
                     /locus_tag="OQQ26_000201"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-phenylpropionate/cinnamic acid
                     dioxygenase ferredoxin subunit"
                     /protein_id="HCS1855820.1"
                     /translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH
                     GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLP
                     EAQP"
     gene            56552..57364
                     /gene="hcaB"
                     /locus_tag="OQQ26_000202"
                     /gene_synonym="phdD"
                     /gene_synonym="yfhX"
     CDS             56552..57364
                     /gene="hcaB"
                     /locus_tag="OQQ26_000202"
                     /gene_synonym="phdD"
                     /gene_synonym="yfhX"
                     /EC_number="1.3.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate-dihydrodiol/cinnamic
                     acid-dihydrodiol dehydrogenase"
                     /protein_id="HCS1855821.1"
                     /translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA
                     SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA
                     ETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK
                     HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL
                     PLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL"
     gene            57374..58576
                     /locus_tag="OQQ26_000203"
     CDS             57374..58576
                     /locus_tag="OQQ26_000203"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylpropionate dioxygenase ferredoxin
                     reductase subunit"
                     /protein_id="HCS1855822.1"
                     /translation="MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDEQHLPYER
                     PPLSKSMLLQDSPQLQSVLPAHWWQENNVHLHSGVTIKTLGRDTRELVLANGESWHWD
                     QLFIATGAAARPLPLLDALGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELA
                     ASATQRRCKVTVIELAATIMGRNAPPPVQRYLLQHHQQAGVRILLNNAIEHVVDGEKV
                     ELTLQSGETLQADVVIYGIGISANDQLAREANLDTANGIVIDEACRTCDPAIFACGDV
                     AITRLDNGALHRCESWENANNQAQIAAATMLGLPLPLLPPPWFWSDQYSDNLQFIGDM
                     RGDDWLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSGKTFDAKLLID
                     ENIALKSL"
     gene            58673..59095
                     /locus_tag="OQQ26_000204"
     CDS             58673..59095
                     /locus_tag="OQQ26_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HCS1855823.1"
                     /translation="MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQ
                     YMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDM
                     TGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR"
     gene            complement(59143..60015)
                     /locus_tag="OQQ26_000205"
     CDS             complement(59143..60015)
                     /locus_tag="OQQ26_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HCS1855824.1"
                     /translation="MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKNGVATD
                     ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGQWQCVSRNDDSLC
                     LVYEHRSGVYHYRVSQTFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ
                     AQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEG
                     YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG
                     ESTTSEMSLRVALL"
     gene            complement(60027..61121)
                     /locus_tag="OQQ26_000206"
     CDS             complement(60027..61121)
                     /locus_tag="OQQ26_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HCS1855825.1"
                     /translation="MKINRIVNEGFMKTMLAAYLPGNSTVDLREVAVPTPGINQVLIK
                     MKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDR
                     VLVYHISGCGFCPNCRRGFPISCTGKGKAAYGWQRDGGHAEYLLAEEKDLILLPDALS
                     YEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDM
                     LPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALQSTA
                     DWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAI
                     THRFTLEQAGDAYALMASGKCGKVVINFPD"
     gene            complement(61154..62152)
                     /locus_tag="OQQ26_000207"
     CDS             complement(61154..62152)
                     /locus_tag="OQQ26_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1855826.1"
                     /translation="MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA
                     PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV
                     PLAVACLMVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPID
                     ENEVLDWLGGQFLGVPVSALIMMVLFALFVFISRKTVFGRSVFAVGGNATAAQLCGIN
                     VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG
                     SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR"
     gene            complement(62177..>62946)
                     /locus_tag="OQQ26_000208"
     CDS             complement(62177..>62946)
                     /locus_tag="OQQ26_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HCS1855827.1"
                     /translation="DHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLG
                     IAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAG
                     IIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGG
                     NQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEE
                     LPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH"
BASE COUNT        15389 a        17169 c        15618 g        14770 t
ORIGIN      
        1 ctggcaactg gcgcacagta gcgcagacaa ttttccggca cttacggtca gccattttat
       61 taccgccaat ctgctcccgg tgatgctggg taatattatc ggcggtgcag tgctggtgag
      121 tatgtgttat cgggctattt atttacgtca ggaaccctga aaaatcagcc cggcgaaaca
      181 gttcatcggg ctgaagatta ttcttgcgct atttgcccat cgggccaggc atgaatcacg
      241 gctttgatca gcgtcgccaa cggaatggcg aagaatacgc cccagaaccc ccacaaacca
      301 ccgaagatca ccaccgataa aataatcacc agcggatgca ggttaaccgc ttcggagaac
      361 aacaccggta ctaacaggtt gccgtccagc gcctgaataa tcagatacac cgcgaagcag
      421 ctccagaatt ccgtgcctgc accaaactgg aatagcgcca cgccaaccac cggaatggtc
      481 accacaaatg cgccaatgta cggaataagt accgagaagc cgaccagcac cgccagcagc
      541 agcgaatagt tcagcccgaa gagcaagaac cccagccagg tggcgatccc taccacgatc
      601 atctccagca ctttgccgcg gatatagttg gtgatttgtt gattcatctc cttccacacc
      661 tgtcctgcca gcccacggtt acgcggcagc acccggcgaa cggcgttcag catctgctct
      721 ttgtctttca gcaggaagaa gaccatcaat ggcaccagca ccagatagac ggcaatggtc
      781 agcaaaccga ccagcgaggc gagggaaatt ttcaccaccg aatcgcccat ggtcagcatc
      841 cgactgcgca tattttcggc cattgcatca ataatgcccg cgtccattaa cgccggatag
      901 cggcgcggca acgtggcggc aaagtcagaa agcttattga gcatccccgg catatcgcgg
      961 attaagtaga tgccctgttg ccaagcgata ggcagtacca cgaacgccat cagtagcaat
     1021 ataccgacaa aaaccaccaa tacaatcgac gtcgcccagc ggcgggagca gccaatagat
     1081 tgcaggcgca cggttggcca ttccagcaaa taggccagca caatagccac cagcaacgga
     1141 gcaagcaggc cactaaagaa aaagataatg ccaaatccgg caactaaaat aaccagcaag
     1201 gcaatcgctt ccgggtcgct aaaacggcgg cgataccatt gcatcaacat ttcgagcata
     1261 aagaccttcc ctgaacctca agagcgggat tgcgatccgc aattgtatcg aaatgtcaca
     1321 aaaaagactt cgctttttat gacggattca ggaaactgaa aagtcatttg agtgggctaa
     1381 tcttcgccgt tacactcaaa ggcggcgcgg tgggaacgat atttcacagt atcggtcaaa
     1441 tgactatctt cagaaataca ggatagaggt tatgttcagg cagttgaaaa aaaacctggt
     1501 tgcaaccctc attgctgcta tgaccattgg tcaggtagcc ccggcgtttg ccgacagcgc
     1561 agacaccttg ccggatatgg gaacctccgc aggaagcacg ctttccattg gtcaggaaat
     1621 gcagatgggc gactattatg tccgccagct acgcggcagc gcgccgttaa ttaatgaccc
     1681 gctgttaacg caatatatta attcgctggg gatgcgtctg gtttcgcatg ccaattcggt
     1741 taagacaccg tttcattttt ttctgatcaa taacgacgaa attaacgcct ttgctttctt
     1801 tggcggcaac gtggtgctgc actctgccct gttccgttat tccgataacg aaagtcaact
     1861 gacttcagtt atggcgcacg aaatctccca cgtcacccaa cgtcacctgg cgcgagcgat
     1921 ggaagatcaa caacgcagcg cgccgctgac ctgggtcggc gcgttaggtt ctattttact
     1981 ggcgatggcc agtccgcagg cggggatggc tgcgctgacc ggtacactgg cgggaacgcg
     2041 tcaggggatg atcagtttca cccagcaaaa tgaacaggaa gcggaccgca ttggtattca
     2101 ggtgctgcaa cgctcgggat tcgatccgca ggcgatgcca accttcctcg aaaaattact
     2161 cgatcaggcg cgttactcct cgcgtccgcc ggaaatttta ttgactcacc cgttgccgga
     2221 aagtcgtctg gcagatgccc gcaaccgtgc taatcagatg cgaccgatgg tggtgcagtc
     2281 gtcggaagat ttctatctgg cgaaagcgcg cacactgggg atgtataatt ccggacgtaa
     2341 ccagctcacc agtgatttgc tggatgaatg ggcgaaagga aacgttcgtc agcaacgagc
     2401 ggcgcaatat ggtcgtgctt tacaggcgat ggaagccaat aaatacgacg aggcgcgtca
     2461 aacgctgcaa ccgttactgg cggcagaacc tggcaacgcg tggtatctcg atctggctac
     2521 tgatatagat cttgggcaaa acaaagccaa tgaggcaatc aatcgcctga aaaatgcccg
     2581 tgatttgcgc accaatccgg tgttgcagct caacctggca aacgcttatc tgcaaggcgg
     2641 tcaaccacaa gaagcggcca atattctgaa tcgctacacc tttaataata aagatgacag
     2701 caacggctgg gatttactgg cacaggcgga agccgcgcta aataaccgcg atcaggaact
     2761 ggctgcgcga gcagaaggtt atgcgctcgc cgggcgactc gatcaggcca tttccttgtt
     2821 gagtagcgcc agttcacagg tgaagttagg cagcctgcaa caagcgcgtt acgatgcgcg
     2881 catcgaccag ttgcgccagc tgcaggaacg ctttaagcct tataccaaga tgtaattcgc
     2941 attaaaggaa gaacaatgac caaacaggta aaaatctacc ataacccacg ctgttcaaag
     3001 agccgggaaa cgctgaacct gctgaaagaa aacggcgtgg agccagaagt ggtgctctac
     3061 cttgagacac ccgccgatgc ggcaacgctg cgcgatttgc tgaaaatgct ggggatgaat
     3121 agcgcccgtg aattgatgcg ccagaaagag gatctttata aagaactgaa cctggctgac
     3181 agttcgctta gcgaagaggc gctgattcag gcaatggtgg ataatccgaa gctgatggag
     3241 cgcccgattg tggtcgcgaa tggcaaagcg cggattggtc gtccaccgga gcaggtactg
     3301 gaaatcgtgg gttaagatgt gctccatcgc tagttgaagc acattgccgg atgcgacgct
     3361 tgccacgtct tatccggcct acgaatacta tggattaact tcgcgtagtt cggataaggc
     3421 gttcgcgccg catccgacaa taaacacctt atctacaact tcagaatttc tttcacaaac
     3481 ggaatggtca gcttacgttg cgcggtaatc gacgcacgat ccaactgatc caacgtcata
     3541 aatagcgtgc gcatttctct gtcgagccgc ttcagcaaga aacgccccac atcttccggc
     3601 agttcaaaac cacgcaaacg cgcgcgtaac tgtagcgcct gcaacttatc ttcatcagaa
     3661 agtggctgca atttgtagat ctgcccccag tcgagtcgcg acgcgagatc cggtaatccc
     3721 agattcaact gccgcggtgg acgatcgccg gtgatcaaca atcgtgtttt gcccgattcc
     3781 agaattcgat tgtagagatc gaaaatcgcc atctcccaca actcatcgcc tgcaatacac
     3841 tcaatgttgt cgatacagac cagcgacaaa tgctccatac cgtcgagcac ttccggaaca
     3901 aaccaagtgc gtttatccag cgggacatag cccaccgcat cgccacgctg cgacaattcc
     3961 gcgcaagccg cgtgcagcag atggctgcgc cccgcgcctt cgcgtgccca gagatagatg
     4021 taaccgctat gttcctgacg cagcacgttt tgcagcgcgg ccagtaaaga ggagttatcc
     4081 cccggccaga aacttgcaaa ggtttcgtcg tcaggaagat aaagtggcaa agagagctgt
     4141 gccggtgtgt tcagagatac ctcaaccagg atttcacaaa atcgcgagaa gtttaccaca
     4201 gaatcccatg atgtttgaac cgggcagcaa cactgcccgg tcggtacatt atttgtctgt
     4261 tatatccgcg tcttctgcgt ccagcaccac ttcttcaggg cgcagcacac tgatcagttt
     4321 gaaaatcaaa cttaagccga taccgacgat ggtcgccagc gccatacctt ttaactccgc
     4381 cgcgccgatg tttaccttcg cgccactgac gccgatgatc aaaatcacgg aagtcaggat
     4441 caggttctgt gctttgttgt aatccacttt cgattcgatc aaaacacgaa taccggaagc
     4501 accgatgaca ccataaagca gcagcgaaac gccgcccatc accggcaatg gaatcatctg
     4561 gatagcggca gccagtttac cgacgcagga aagcaggata gcgaaaatcg ccgccccgcc
     4621 gataacccag gtactgtaaa cacgggtgat cgccatcacg ccaatgtttt ctccgtaagt
     4681 ggtatttggc gtagagccaa agaagccgga gatcacggtc gacaagccat tagcaaacat
     4741 cgaacggtgc agacctggat cgcgcagcag atcttttttg acgatattag ccgttactac
     4801 caggtgccct acgtgttcgg caataaccac taacgccgct ggcagaatag tcagaatggc
     4861 aaaccactcg aagcgcggcg tatagagggt tggcagcgca aaccagtgag cattaataat
     4921 cggcgtggta tcgacaattc ccattgcgaa agagagcgcg taccccacca gcacgccaat
     4981 taaaatcggg ataattgcca ggaaaccacg aaacagcacg gaacctaaaa cagtgactgc
     5041 cagggtggta atagagatga tgatggtttt ggagtctggc gtttgccctt cagccgggag
     5101 taaacccgcc ataccggcag ctacgcccgc cagctccaga ccgatgacgg caacgattgc
     5161 gcccattgcc gcaggtggaa acagcacgtc cagccagccg gtccccactt tcttcacgat
     5221 aaaagaaacc aggcagaaca gcacgccgca cataataaag ccgcccagcg cgacttcata
     5281 ccccaacggc aacagtaaca ataccggaga aataaaggca aagctggaac caagataagc
     5341 cggaattttc cctttacaga tgaagagata cagcagcgtt ccaataccgt taaataacag
     5401 tacagtcgcc gggttaatat gaaataagac gggcaccagg acggttgcac caaacatggc
     5461 gaacaaatgt tgcaaactaa gcgggattgt ctgtaaaagt ggcggtcttt cactcacccc
     5521 gatagcacgg cgcgtcatag tattatcctc tgtattatgt gttataggcg ctttactcaa
     5581 aaaaaagccg actcttaaag tcggctttaa ttatttttat tctttatttc gtaccaaaga
     5641 ttttgtcacc ggcatcgccg aggcccggaa taatgtatcc gtgctcgttc agtccctggt
     5701 caatcgatgc ggtatacagt tcgacgtccg ggtgcgcttt ttccagcgca gcgatacctt
     5761 ctggcgcagc gaccagcacc agaactttga tgctgctgca gcccgctttt ttcagcaggt
     5821 cgatggtcgc gataacggaa ccaccggttg ccagcattgg gtcaacgatc agcgccatac
     5881 gctcatcgat gttagaaacc agtttctgga agtacggtac cggctccagc gtttcttcat
     5941 tacggtacat accgacaacg ctgatgcgcg cgctcggaac attttccagc acaccgtcca
     6001 tcatccccag accggcacgc agaattggca caacggtaat tttcttacct ttgatctggt
     6061 cgatttctac cgggccgttc cagccttcga tagttacttt ttccgtttcg aggtcggcgg
     6121 tcgcttcgta agtcagcagg ctacccactt cggaagcgag ttcgcgaaag cgcttggtgc
     6181 tgatatcttg ctcacgcatc agtcccagct tgtgtttgac gagtgggtgt ttgacttcca
     6241 cgatcttcat actctttctc ctttgagggg cagccacaaa aaaaatcgac ggattatacc
     6301 tcctttcttc aaggcggcaa tattcttttc gttgacttta gtcaaaatga taacggtttg
     6361 agataaagtt atattatatt caaatggtta tgaaagaaga ttattccatc cgaaaactaa
     6421 cctttgccct ggcacaagtc ttctttcgcc gcgcgtctgg ggaaaagacg tgcaaaaagg
     6481 ttgtgtaaag cagtctcgca aacgtttgct ttccctgtta gaattgcgcc gaattttatt
     6541 tttctaccgc aagtaacgcg tggggaccca agcagtgacc gataaaacct ctcttagcta
     6601 caaagatgcc ggtgttgata ttgacgcggg taatgctctg gttggaagaa tcaaaggcgt
     6661 agtgaagaaa acgcgtcgtc cggaagtgat gggcggtctg ggcggcttcg gtgcgctgtg
     6721 tgcattgccg caaaaatatc gtgaacccgt gctggtttcc ggcactgacg gcgtaggtac
     6781 caagctgcgt ctggcaatgg acttaaaacg tcacgacacc attggtattg atctggtcgc
     6841 catgtgcgtt aatgacctag tggtgcaagg tgcagaaccg ctgtttttcc tcgactatta
     6901 cgcaaccgga aaactggatg ttgataccgc ttcagcggtg atcagcggca tcgcggaagg
     6961 ttgtctgcaa tcgggctgtt cactggtggg tggcgaaacg gcagaaatgc cggggatgta
     7021 tcacggtgaa gattacgatg tcgcgggttt ctgcgtgggc gtggtagaaa aatcagaaat
     7081 catcgacggc tctaaagtca gcgacggcga tgttctgatt gcactcggtt ccagcggtcc
     7141 gcactcgaac ggctattcgc tagtgcgcaa aattcttgaa gtcagcggtt gtgatccgca
     7201 aaccactgaa cttgatggta agccattagc cgatcatctg ctggcaccga cccgcattta
     7261 cgtgaagtca gtgctggagt tgattgaaaa ggtcgatgtg catgccattg cgcacctgac
     7321 cggcggcggc ttctgggaaa acattccgcg cgtattgcca gataatactc aggcagtgat
     7381 tgatgaatct tcctggcagt ggccggaagt gttcaactgg ctgcaaacgg caggtaacgt
     7441 tgagcgccat gaaatgtatc gcaccttcaa ctgcggcgtc gggatgatta ttgccctgcc
     7501 tgctccggaa gtggacaaag ccctcgccct gctcaatgcc aacggtgaaa acgcgtggaa
     7561 aatcggtatc atcaaagcct ctgattccga acaacgcgtg gttatcgaat aatgaatatt
     7621 gtggtgctta tttccggcaa cggaagtaat ttacaggcaa ttattgacgc ctgtaaaacc
     7681 aacaaaatta aaggcaccgt acgggcagtt ttcagcaata aggccgacgc gttcggcctt
     7741 gaacgcgccc gccaggcggg tattgcaacg catacgctca tcgccagcgc gtttgacagt
     7801 cgtgaagcct atgaccggga gttgattcat gaaatcgaca tgtacgcacc cgatgtggtc
     7861 gtgctggctg gttttatgcg cattctcagc ccggcgtttg tctcccacta tgccgggcgt
     7921 ttgctgaaca ttcacccttc tctgctgccg aaatatcccg gattacacac ccatcgtcag
     7981 gcgctggaaa atggcgatga agagcacggt acatcggtgc atttcgtcac cgatgaactg
     8041 gacggtggcc cggttatttt acaggcgaaa gtcccggtat ttgctggtga tacggaagat
     8101 gacatcaccg cccgcgtgca aacccaggaa cacgctattt atccactggt gattagctgg
     8161 tttgccgatg gtcgtctgaa aatgcacgaa aacgccgcgt ggctggatgg tcaacgtctg
     8221 ccgccgcagg gctacgctgc cgacgagtaa tacccccgta attaaagcgc cagctctgcc
     8281 gctggcgttt ttcaattcac ctgtaaatcg caagctccag cagttttttt cccccttttc
     8341 tggcatagtt ggacatctgc caatattgct cgccataata tccaggcagt gtcccgtgaa
     8401 taaaacggag taaaagtggt aatgggtcag gaaaagctat acatcgaaaa agagctcagt
     8461 tggttatcgt tcaatgaacg cgtgcttcag gaagcggcgg acaaatctaa cccgctgatt
     8521 gaaaggatgc gtttcctggg gatctattcc aataaccttg atgagttcta taaagtccgc
     8581 ttcgctgaac tgaagcgacg catcattatt agcgaagaac aaggctccaa ctctcattcc
     8641 cgccatttac tgggcaaaat tcagtcccgg gtgctgaaag ccgatcagga attcgacggc
     8701 ctctacaacg agctattgct ggagatggcg cgcaaccaga tcttcctgat taatgaacgc
     8761 cagctctccg tcaatcaaca aaactggctg cgtcattatt ttaagcagta tctgcgtcag
     8821 cacattacgc cgattttaat caatcctgac actgacttag tgcagttcct gaaagatgat
     8881 tacacctatc tggcggtgga aattatccgt agcgatacca tccgttacgc gctgctggag
     8941 atcccatcag ataaagtgcc acgctttgtg aatttaccgc cagaagcgcc gcgtcgacgc
     9001 aaaccgatga ttcttctgga taacattctg cgttactgcc tcgatgatat tttcaaaggc
     9061 ttctttgatt atgacgcgct gaatgcctat tcaatgaaga tgacccgcga tgccgaatac
     9121 gatttagtgc atgagatgga agccagcctg atggagttga tgtcttccag tctcaagcag
     9181 cgtttaactg ctgagccggt gcgttttgtt tatcagcgcg atatgcccaa tgcgctggtt
     9241 gaagtgttac gcgaaaaact gactatttcc cgctacgact ccatcgtccc cggcggtcgt
     9301 tatcataatt ttaaagactt tattaatttc cccaatgtcg gcaaagccaa tctggtgaac
     9361 aaaccactgc cgcgtttacg ccacatttgg tttgataaag cccagttccg caatggtttt
     9421 gatgccattc gcgaacgcga tgtgttgctc tattatcctt atcacacctt tgagcatgtg
     9481 ctggaactgc tgcgtcaggc ctcgttcgat ccgagcgtgc tggcgattaa aatcaacatt
     9541 taccgtgtgg caaaagattc acgtatcatc gactcgatga tccacgctgc gcacaacggc
     9601 aagaaagtga ccgtggtggt tgagctacag gcacgttttg acgaagaagc caacattcac
     9661 tgggcgaagc gcctgaccga agcaggcgtg cacgttatct tctctgcgcc ggggctgaaa
     9721 attcacgcca aactgttcct gatttcacgt aaagaaaacg gtgaagtggt gcgttatgca
     9781 cacatcggga ccgggaactt taacgaaaaa accgcgcgtc tttatactga ctattcgttg
     9841 ctgaccgccg atgcgcgcat caccaacgaa gtacggcggg tatttaactt tattgaaaac
     9901 ccataccgtc cggtgacatt tgattattta atggtgtcgc cgcaaaactc ccgccgcctg
     9961 ttgtatgaaa tggtggaccg cgagatcgcc aacgcgcagc aagagctgcc cagtggtatc
    10021 accctgaagc taaataacct tgtcgataaa ggcctggttg atcgtctgta tgcggcctcc
    10081 agctccggcg taccggttaa tctgctggtt cgcggaatgt gttcgctgat ccccaatctg
    10141 gaaggcatta gcgacaacat tcgtgccatc agtattgttg accgttacct tgaacatgac
    10201 cgggtttata tttttgaaaa tggcggcgat aaaaaggtct acctttcttc tgccgactgg
    10261 atgacgcgca atattgatta tcgtattgaa gtggcgacgc cgctgctcga tccgcgcctg
    10321 aagcagcggg tgctggacat catcgacata ttgttcagcg atacggtcaa agcacgttat
    10381 atcgataaag aactcagtaa tcgctacgtt ccccgcggca atcgccgcaa agtacgggcg
    10441 cagttggcga tttacgacta catcaaatca ctcgaacaac ctgaataacc ctatgccaat
    10501 acacgataaa tcccctcgtc cgcaggagtt tgctgcggtc gatcttggtt caaacagttt
    10561 tcacatggtc atagcccgtg tggtagatgg tgccatgcag attattggcc gcctgaaaca
    10621 gcgggtgcat ctggcggacg gcctggggcc agataatatg ttgagtgaag aggcaatgac
    10681 gcgcggttta aactgtctgt cgctgtttgc cgaacggcta caagggtttt ctcctgccag
    10741 cgtctgtata gttggcaccc atacactgcg tcaggcgctg aacgccactg actttctgaa
    10801 acgcgcggaa aaggtcattc cctacccgat tgaaattatt tccggtaatg aagaagcccg
    10861 tctaattttt atgggcgtgg aacataccca accggagaaa ggtcgcaaac tggttattga
    10921 tattggcggc ggatctacgg aactggtgat tggtgaaaat ttcgaaccta ttctcgttga
    10981 aagccgccgg atgggttgtg tcagctttgc ccagctttat tttcctggcg gggtcatcaa
    11041 taaagagaat tttcagcgcg ctcgcatggc ggcagcacaa aaactggaaa ctttaacctg
    11101 gcaattccgt attcagggct ggaacgttgc aatgggcgct tccggtacca taaaagccgc
    11161 ccatgaagtg ttaatggaaa tgggcgagaa agacgggata attaccccgg aacgtctgga
    11221 aaaactggta aaagaagttt tacgtcaccg taatttcgca tcgctgagtt taccgggtct
    11281 ttccgaagag cggaaaacag tcttcgttcc tggactggcg attttatgtg gtgtgtttga
    11341 tgctttagcc atccgtgaac tgcgcctttc tgacggggcg ttacgcgaag gcgtactgta
    11401 tgaaatggaa ggacgtttcc gtcatcagga tgtgcgtagt cgcaccgcca gcagcctcgc
    11461 caaccagtat cacatagaca gcgaacaggc ccgacgagtg ctggatacca ctatgcaaat
    11521 gtacgaacag tggcgggaac agcaaccaaa gctggcgcat ccgcaactgg aggcgctact
    11581 gcgatgggcc gccatgctgc atgaggtcgg gttgaatatc aaccacagca gtttgcatcg
    11641 ccactccgct tatattctgc aaaacagtga cttgccgggt tttaatcagg aacagcagct
    11701 gatgatggcg acactggtgc gctatcaccg taaagcgatt aagctcgacg atctgccgcg
    11761 ctttaccttg tttaagaaga aacagttcct gccactgata cagctattgc gccttggcgt
    11821 attactaaac aatcaacgtc aggcaaccac cacaccgcca acattgacac tgattactga
    11881 tgacagtcac tggacactgc gtttcccgca tgactggttt agtcagaatg cgctggtact
    11941 gcttgatctg gaaaaggagc aagaatactg ggaaggcgtg gctggctggc ggttgaaaat
    12001 tgaagaagaa agtaccccag aaatcgccgc ttaatgcttt gcgggccgac gagaaatgtc
    12061 ggcccgcatt attcaggcac tttcgcgaat gggttcgatt tcattcagcg tatcaattaa
    12121 cggttgcggc ttaccaataa gataaccctg catataatcg atccccaaag agagcaccgc
    12181 ctcgcggatc tcttcgtttt caacgtactc tgccactacc cgcattttct tcattcgcgc
    12241 cagatggcaa atcgacgcca caatctgata atccagacta tttgacacaa tattgcggat
    12301 aaagctgccg tcaattttaa gcagatcggc attcacattt ttaagccgtg catagctggc
    12361 gtagccggtg ccgaaatcat caatcgcaat ctggcagcct aattcctgaa gatgctgcaa
    12421 ggtgatttgc gcctgcttaa cattggtcag agcattactt tcggtgactt caaaaataag
    12481 ttgccacgct tcaatctgat atttagccag caactgactg acttcaacag gaaaacgagc
    12541 ctgacatacc gaggttggag acagattcat agcaaaacgg tgagcgggca tcttcgctct
    12601 gttttcagcc ataaattgca gcgtatgctc aatgacccac atgtcgatac tcgacgataa
    12661 accaaattcg tgcgcgaccg gcaagaagct atcggggccg atcagttcat cattctcacc
    12721 tttcatgcgc agaagaattt catggtaaac atcaccacgc ataccggtaa tcggctgggc
    12781 catcagggaa aaatggttgt gttccagcgc ctgctgtagt cgattcatca tcgcgacttt
    12841 atctttcaat tcgcgttgca aatacattgc cccgcgacgc tgcatatttt ccggggcgtt
    12901 ggtcacgatg gaaagttcgg cgaccgtatt tagctctccc agcagcaggt agatatgatt
    12961 cactggcgag cgcacatagc agtaactgac gccaatctgc ggttgcatcg gcatcccatc
    13021 ccaaaagaaa cgaaattgct tgagatgact atccagtgcg gtaatgcgct cctggtgcga
    13081 ttctgtattc agtcgcagcg cgagatcgtt acccgaaagc tgataaacat cttcacccgg
    13141 ttccagcaag ggtgacagcc agtgagaaag tttttgcttg tattgaatcc gcagcatgat
    13201 gccatagttc ttaaccagca tttccatgcc agggatgcgt aaataacaaa gcgcagacca
    13261 gggggcatca cgcaacgcgc gattcagggc gcgaacattt ggcagatgaa ccaccgggtc
    13321 cacatacgca agccgctgaa tgcgtctgac taccgctcgc tgacgagttg ccagtacagc
    13381 catctaattg acaataaaag agaataccag ataactggag gaggttatgg tcagctgcgt
    13441 ggtatagcca ggataaatgg gaatgtaatt ttgatagctg tggatgctga tcatcaacac
    13501 gaccgcccag agcagcgaaa tcagcttata accatagcgc attgctcccc acatcatcag
    13561 gggcagcaat aatgacaagg tataattggt gctaaaaatt gtgctttttt catttaacgg
    13621 catgcataac agcaacaata aagcacctaa tgccagtagc cagagcgcga actctttttt
    13681 ggtgactttg gcatcaacct gctgttttaa ttgcgaataa tagctacgta aataaaatgg
    13741 atttcgcact acccgaatga tgaagtagca cagcgggaca ccgatcagat tacccaccag
    13801 taaggcctga taattgatta aagtcccgag gttaaaaggc atgacaccga ccagattttc
    13861 tctgctcgcc agtaatccta caaatgcagc aaactggaaa agtatcagaa acagcgttgc
    13921 aggaaacact atctgccaga atatacgctg ggaaattaaa cgggtatcac catgtgaaac
    13981 gttgttacgc cggggagtaa agaccctgta accgccccaa cagagaatga taataaaatt
    14041 agccgttaat gagagcgttt cgtaaaaacc cagctctgca tatttgcgga caaaaatccc
    14101 taaggtgatc cctggcaatg ccgcccagct gaaaaacatc atcatgctga tcatcagtgc
    14161 caaaggcaga taaaagagaa aaacctcacc ggaagaaata tgcgcgaaag tattaatgtg
    14221 ggcgaaaatg ggcaagatta aagaaggcag gaacagcgga agcccccacc atttatcacg
    14281 tatttttata taagttgcat tcagtttcat agatgctcag cagaatcccc cacatcctga
    14341 aggaggtgta ttcagacagg catcccacct gacttcgaat gatgattatt catcactata
    14401 gagagcattg attctaagtg tcatatgaaa gttccaattg atatatatca aacaaaataa
    14461 ccctaattaa tgaattatta cgtttatcat gttaattcat cattattaca tcatcattgt
    14521 aaataattaa attaacttcc ataacattaa aatatgtatc cactgacgct tttttacata
    14581 acgaagaatt gaccattttg tcctgttgtg ccttaatgta agtaccgtcc acagcgtggg
    14641 acatacttca aggaaccttt tgtgagtcag gcaaccagta tgcgaaaacg acaccgattt
    14701 aacagtcgca tgacccgtat cgtactgctc atcagcttta tcttcttctt tggccgtttt
    14761 atctactcgt ccgtcggtgc ctggcagcac catcagagca aaaaagaagc tcagcaatcc
    14821 acactctccg tcgaatcacc ggtacaacgt tagcggttac cttctccact ttcacagaac
    14881 ataacggcac ttcgctgtcg gatgcttttg ctctttggga ttatcaaagc ggcagatatt
    14941 ctttcatctt aaattttacg tctttgtcct gactgatgtt tatcctgttt ggctgcgaaa
    15001 taaatataaa attaatatat atgttgtaat gatatatttt tataaattat tccctgcgtg
    15061 aattttaata aatttaatct atccctttat acgcaataca tttactttcc tcttttgatg
    15121 atcttaaatg tcttattttt cgtaatgtgt ataacaagga atagtgatga aatttaaaaa
    15181 atgtcttctg cctgtggcaa tgttagcgtc attcactctg gcaggatgcc agtcaaatgc
    15241 tgacgatcat gccgccgatg ttaatcaaac cgatcaactg aataccaaac aagaaactaa
    15301 aaccgttaat attatttcca ttcttcccgc aaaagttgcc gtagacaact cccaaaataa
    15361 acggaacgca caagccttcg gcgcgcttat tggcgcagtc gctggcggtg ttatcggcca
    15421 caacgtcggt tctggcagca attccggaac gacggcaggg gcagttggcg gcggagctgt
    15481 aggcgcggca gcgggttcta tggtgaatga taaaacctta gtggaaggtg tttctttaac
    15541 atataaggaa ggcaccaaag tgtatacctc cacccaggtg ggtaaagagt gccagtttac
    15601 gacaggttta gccgttgtta ttaccacaac gtataacgaa acgcgtattc agccaaatac
    15661 taaatgtcct gaaaagagct aataatcagg aggagtcatg aagaaagttt ttctttgcgc
    15721 catcttagcc tccttaagct atccggctat cgcctcatca ttgcaggatc aactctctgc
    15781 tgtcgcagaa gcggaacagc aaggtaaaaa tgaagagcaa aggcagcatg acgaatgggt
    15841 cgcggagcgc aacagggaaa tccagcaaga gaagcaacgt cgcgcaaatg cccaggccgc
    15901 cgctaacaaa agagcggcaa cggcagcggc aaataagaaa gctcgtcagg ataaactgga
    15961 cgccgaagcc actgcggaca aaaaacgcga tcaaagttat gaagatgagc tacgcagctt
    16021 agagattcag aaacaaaaac tggcgctggc gaaagaagaa gcccgcgtta agcgcgaaaa
    16081 cgaatttatc gatcaggaac tgaagcacaa agctgcgcaa accgatgtgg tgcaatctga
    16141 agctgacgca aacagaaata tgactgaagg cggtcgcgat ctgatgaaaa gcgtgggcaa
    16201 agcagaagag aacaaatcgg acagctggtt taattaatcg atgttagtaa cttcaagcct
    16261 atgattcttg aagataaaaa accctctgta gtaacggagg gttttgttca ttcatagtgc
    16321 agggatcaaa atcattccca ctcaatggta gctggcggct tgccgctgat gtcatacacc
    16381 acgcgggaaa taccgttcac ttcattgata atgcggttgg aaacgcgacc gaggaaatcg
    16441 tacggcagat gcgcccagtg tgcggtcata aagtcgatgg tttcgacagc acgcagagag
    16501 acaacccagt catacttacg accatcgccc attacgccaa cggaacgtac tggcaggaag
    16561 acggtgaacg cctggctgac tttgtcatac aggtccgctt tacgcagttc ttcaatgaag
    16621 atggcgtcag cacggcgcag caggtcacag tactctttct tcacttcacc cagaacacga
    16681 acgccaaggc ctggtcccgg gaacgggtga cggtacagca tgtcgtacgg caggcccagc
    16741 tccagaccaa tcttacgcac ttcgtctttg aacagctctt tcagcggttc aaccaggccc
    16801 atcttcatct ctttcggcag gccgcccacg ttgtggtgag atttgatgac gtgtgcttta
    16861 ccggttgcag atgcggcaga ttcaataacg tcagggtaga tggtgccctg cgccagccac
    16921 ttcacgtctt ccagtttcag tgcttcttca tcgaatactt caacgaaaac gcgaccgatg
    16981 attttacgtt ttgcttccgg atcgttttcg ccagccagcg ctgacaggaa gcgatcttct
    17041 gccggtacgt gaacaatgtt aagaccaaag tgatcgccaa acatatccag aacctgctct
    17101 gcttcgttga gacgcagcag gccgttgtcg acgaatacgc aagtcaggtt tttaccgata
    17161 gcgcggtgca gcagcattgc ggttacggag gaatccacac caccagagag gccgaggatg
    17221 actttatcgt cgcctacctg ctcgcggatg cgagctacag catcgtcgat aattttcgct
    17281 ggcgtccaca gggcttcaca ctggcagata tcacgcacaa aacgctccag catgcgcata
    17341 ccctggcggg tgtgagtcac ttccgggtgg aactgtacgc catagaagcg tttttcttcg
    17401 ttagccataa tggcaaacgg gcagctttcg gtgctggcta cggtgacgaa gtcggacggg
    17461 atagcggtaa ctttatcgcc gtggctcatc cagacatcga gcagcggttt accgtctgcg
    17521 gtcagcgcat cttcgatacc gcgaaccagt gcgctgtcgt ttacgacttc aacctgcgcg
    17581 tagccaaatt cacgttcgtt agaggcttca acgtggccgc ccaactgcat tgccatggtc
    17641 tgcatgccat agcaaacgcc gaataccggt acgcctgctt caaagacata ctgcggcgca
    17701 cgcggactgt tttcttcagt agtactttcc gggccgccgg aaagaataat gccgcttgga
    17761 ttgaagtcac gaatttgtgc ttctgtcaca tcccacgccc acagttcgca gtaaacaccc
    17821 agctcacgca cgcggcgcgc aaccagttga gtgtactgag aaccgaagtc cagaatgagg
    17881 atgcgatgct tatgaatgtt ttccgtcatt gacgcttatt ccgaggcaag tgaaacagat
    17941 aatataaatc gcccgacatg aagtcgggcg aagagaatca ggagcccaga cggtagttcg
    18001 gggactcttt agtaatggtc acgtcgtgaa cgtggctttc ctgaatgccc gcaccgctga
    18061 tacgtacaaa ctccgcttta gtacgcagtt cgtcgatagt accacagccg gtcaggccca
    18121 tacaggagcg caggccgccc atctgctggt gaatgatctc tttcaggcga cctttatagg
    18181 ctacgcgacc ttcgatacct tccggcacca gtttgtcggc agcgttgtca ctctggaagt
    18241 aacggtcaga agaacctttg gacatcgcac ccagagagcc cataccacgg taagatttgt
    18301 aagaacggcc ctggtagagt tcaatttcac ccggagattc ttcagtaccc gccagcatgg
    18361 aacccaccat taccgcgctt gcgccagcgg cgatagcttt ggcgatgtcg ccggagaagc
    18421 gaataccacc atctgcgata accggaatac ctgtgccttc cagcgcttca actgcgtcag
    18481 caacggcagt gatctgcgga acacctacgc cagtcacgat acgagtcgta cagatagagc
    18541 cagggccgat accgacttta accgcgctgc aaccagcttc tgccagagcg cgtgcacctg
    18601 cagctgttgc cacgttgccg ccgatgattt gcagatcagg atatttagca cgggtttcac
    18661 ggatacgctg cagaacgcct tcagagtgac cgtgagagga gtcgatcagc agaacgtcaa
    18721 cgcctgcggc aaccagcgcg tcaacacgct cttcgttacc cgcacccgcg ccaaccgctg
    18781 caccaacacg cagacggcct tgctcgtctt tacaggcgtt cggtttacgt tccgctttct
    18841 ggaagtcttt cacggtgatc atgccgatca ggtggaattc gtcatcaacc accagcgctt
    18901 tttcaacgcg tttttcgtgc atttttgcca gcaccacttc acgagcttca ccttcgcgca
    18961 cggtgaccag acgctctttc ggcgtcatgt aaacgctaac cggctggctc aggtcggtaa
    19021 caaaacgcac gtcacgaccg gtgataatac ccaccagttc gttttcttcg gtaacgaccg
    19081 gatagcccgc aaaaccgtta cgctcggtca gttctttcac ttcgcgcagc gtcgtggttg
    19141 gcagaacagt ctgcggatca gtcaccacac cagattcgtg ttttttcaca cggcgaactt
    19201 cttctgcctg gcgttcaatg gacatgtttt tgtggataaa gccgataccg ccttcctgag
    19261 ccagagcaat agccaggcgc gcttccgtta cggtatccat tgctgcggaa agcataggga
    19321 tattcagacg aatagttttc gtcagctggg tgctgaggtc agcagtattc ggcagaacgg
    19381 tagaatgagc aggaacgagg agaacgtcgt caaacgtcag agcttcttta gcgatacgta
    19441 gcatgggcaa tatctcgacc agagtggtta ataaatattg ccgcggcatt atacagagcg
    19501 taaccgattg catctacccc tttttgcaaa aaatgcttgc tatccccgga gggcgggtta
    19561 ctatcgacta aataacctgc tgatttagaa tttgatctcg ctcacatgtt accttctcaa
    19621 tcccctgcaa tttttaccgt tagtcgcctg aatcaaacgg ttcgtctgct gcttgagcat
    19681 gagatgggac aggtttggat cagcggcgaa atctctaatt tcacacaacc ggcttccggt
    19741 cactggtact ttacactcaa agacgacacc gcccaggtac gctgcgcgat gttccgcaac
    19801 agcaaccgcc gggtgacctt ccgcccacag catgggcaac aagttttagt tcgcgccaat
    19861 attacgctct acgagccgcg cggcgactac cagataatcg ttgagagtat gcagccggcc
    19921 ggtgaagggc tgctgcaaca gaagtacgaa cagctcaaag cgaagttgca ggctgaaggt
    19981 ttgttcgatc agcaatacaa aaaaccactt ccctcccctg cgcattgcgt tggtgtgatc
    20041 acctcaaaaa ccggtgctgc gctacatgat attttgcatg tgttaaaacg tcgcgatcct
    20101 tctctaccgg cgatcatcta ccccaccgcc gttcagggcg atgacgcgcc gggacaaatt
    20161 gttcgcgcca ttgaactggc gaatcagcgc aatgagtgcg acgtgttgat cgttgggcgc
    20221 ggcggcggtt cgctggaaga tttatggagt tttaacgacg aacgcgtagc gcgggcgatt
    20281 tttgccagcc gcattccggt cgtcagcgcc gtcgggcatg agacggatgt gaccattgcc
    20341 gattttgttg ccgatctgcg tgcgccaacg ccgtctgccg ccgctgaagt agtgagccgt
    20401 aatcagcaag agttactgcg ccaggtgcaa tcggcccgtc aacggctgga gatggcgatg
    20461 gattattatc tcgccaaccg tacgcgtcgc tttacgcaga ttcatcatcg cttgcagcag
    20521 cagcatccgc agctccggct ggcacgccag caaaccatgc ttgaacgcct gcaaaaacgg
    20581 atgagctttg cgctggaaaa tcagcttaag cgtgccgggc aacaacagca gcgattaaca
    20641 cagcggctga atcagcaaaa tccacagccg aagattcatc gcgcgcaaac gcgcattcag
    20701 caactggaat atcgtttagc agaaatcctg cgcgcacagc ttagcgccac gcgtgaacgt
    20761 ttcggtaatg cagtaacgca cctcgaagcc gtaagcccac tgtcaacgct ggcgcgtgga
    20821 tacagcgtta ctactgctac tgacggcaat gtactgaaaa aagtgaagca agttaaagcg
    20881 ggtgaaatgc taaccacacg tctggaagac ggctggatag aaagtgaagt aaaaaacatc
    20941 cagccggtaa aaaaatcgcg taaaaaggtt cattaagcca gcacgaattc aacgcgtttt
    21001 ttcgatatca agccatgccc gtgctgacag aagtaatcta ctgcaccgca ggcttttaac
    21061 acctgcaacg gttgatggca gtctggacaa agagctttca tttcaataat ttccccgcag
    21121 gatgggcaac gcgcatggcc gttatcctga tcaagcacat gctgacattg tggacaatgc
    21181 agttccatat gaattcctcc ggtagccatc cctctacatt catagaggga atggcagata
    21241 aaatacttac ggataattat ttatttttct tgatgtgctt catcagacgc ttacgtttac
    21301 gcatctgggt tggcgtcagg gtgttacgct tgttcgcata cgggttttcc ccttctttga
    21361 actgaatacg aatcggcgat cccattacgt ccagcgattt gcggaagtag ttcatcaagt
    21421 agcgcttgta ggaatcaggc aggtctttca cctgattacc gtgaatcacc acaatcggcg
    21481 ggttataacc accagcgtgg gcatatttca gcttcacacg acgaccgcgt agcagcggcg
    21541 gttggtgatc ttcaacagcc atcgtcatga tgcgcgtcag catagaggtc cccacacgac
    21601 gggtggagct gtcatacgct tcacgtactg attcaaacaa gttaccaaca ccactgccgt
    21661 gcaaggcaga gataaagtgc acacgagcaa aatcgataaa gcccagacgg aagtccagcg
    21721 tttctttcac ctgctctttc acttcctgac tcaggccatc ccacttattc accacaatga
    21781 caagtgagcg cccactattg agaataaagc ccagcagcga gagatcctga tcggaaatac
    21841 cttcgcgcgc atcaatcact aacatcacca cgttggcgtc ttcaatggcc tgcaacgttt
    21901 tgattacgga gaatttctct acagcatcgg tgattttgcc gcgtttacgt acgccagcgg
    21961 tgtcaatgag cacatactca cgtccatcgc gttccattgg gatgtagatg ctgtcacgcg
    22021 tcgtgccagg catgtcgtaa acaacaacgc gctcttcacc aagaatacgg ttagtgagtg
    22081 tagacttacc tacgttcgga cgacccacaa tcgccagttt gatcggcaga ctttgcgggt
    22141 cgaagtcgtc ttcctcttct tcttcgccgt tctcttccgc ttcaaattgc gcccagtatt
    22201 cagcgtcttc gtcgacttcc tcttgcggtg cgagatcttc catccacggc agcagcacat
    22261 gctccagcag acttaatacg ccacgaccgt gagacgcggc gatcgggtag atttcaccta
    22321 aaccaagcga gtagaaatca accactgcct gatcgggatc cagaccgtca gttttgtttg
    22381 ccaccaggaa ggtcggtttt tcacgggagc gcagatgttt ggcaatcgct tcatctgccg
    22441 gcatcaggcc cgcgcgcgca tccaccataa acagtacgac gtccgcttct tcaatcgcca
    22501 gcagcgactg ttccgccatg cgggtttcta caccgtcttc tgtgccatca atcccgccgg
    22561 tatcaataca gataaactca cggccttcaa tttccgcacg accgtactta cggtcacgag
    22621 tcagacccgg gaaatccgca accagcgcat ctcgggtgcg agttagacgg ttaaataacg
    22681 tggattttcc tacgttaggg cgcccgacaa gcgcgaccac aggtaccatg tttaaagcct
    22741 catttttata aatcatcaga caacgcacgc tatattcgcg tcgttgttaa aaacaggaaa
    22801 acggcccctg tccaggagcc gttttcaaag tgaacgacag agacgattaa cgtgtaatag
    22861 agtacacggt tccgtctttt gcctggatca gcagtttgcc gtcagcggca accggttcag
    22921 tctggaaacc ggaactatca actttttgct gggcaacgaa acgaccatct tcgacgttaa
    22981 tccagtgcag ataaccttca ctgtcaccga ccaccaggtt gccattatac agcaccggag
    23041 aagtcagcag gcgatgcagc agatcgcttt gtgtccactg cgtaacgccg ccatcaatgg
    23101 tcaacgccat cacccggtca ttttgatcga ccagatagat gcgattgcca tcgacgatga
    23161 aatcattcac cgaacccagt tcgcgtttcc acataatctg accactgcgc agatcaagcg
    23221 ccgtcaggtt accattatag gccagcgcga aaacaacgcc gttaacaacg acgggagtcg
    23281 tgtcaacatc gctcagacgg tcaatttcgg tagaaccggt cgcctgggaa atacgctgct
    23341 gccaaatcat ctggccctgt tccatcagca ctgcgctgac gcgaccatta tcgccaccca
    23401 cgacggccgc accaaaagcc gttgccggcg cagactcgcc acgcaaagag agcgaaggca
    23461 tatcgaggtt aactgtccat ttgacagcgc cgtcagcttc gttcagcgcc tgtaactgac
    23521 cgttactggt gtggattaac accagaccgt cgctgaccac cgggctcgaa agtgcttcac
    23581 ccgcgacttt agtttgccat gccacagtac catcgctggt attcagcgcg taaacctgcg
    23641 ccttttcgct gccaatgtag acatgcccac cagacacggt cacaccgcca gaaagtaatg
    23701 caggctcttt agagaaccag ccatctttct cggccaggct gacagaccag atttctttgc
    23761 catcatccac attcagcgct tttactaaac cagcgcggtc cgctgcatag acaacgttgt
    23821 ccgccagtgc cggatgaaga ttggaataga agttgccaat gccgctacca acggaagtgc
    23881 tccacgccgt ggtcggcgta aactggtttt caacggttgg caatggggac atctttacca
    23941 catcttcttc gctgttaaac agcgaacagc cgcttaaaag ggtaacggaa agcagtcctg
    24001 gcagcagtaa tttacgcaat tgcatcgggt ccctctcaga tggacaaatt attaattttc
    24061 atctgcatca tttcgctcag tgccggagta acatcgcttt tcacgcctgc ttcccatgca
    24121 ctacgcgcac cttgcttatc acctttgctc agcaatgctt caccacgcag gtcggcaaca
    24181 atggcagccc acccttcacc tttgatggta tcaagggttt tcagcgcggc atcagcctgc
    24241 ttgagctgta cctgaatgcg agcaagacgc agatttatca cggctttgag attttcatcg
    24301 ctcgtgtctg ccagcccctg ttgtaactgg gcggcagctt tctctagttc atttttgtca
    24361 acaaattgct gcgcaagttc caaagaagcc agcgcaccat aagtattttt attttcagca
    24421 gcaaattttt ccgccgccgg gatgctatcc ggtttgcctt cgctcactgc ggtaaccgca
    24481 ttttgatagg caagagaagc ggagcgtgca gaatcaacct gatggctgtt ccagtagcgc
    24541 cagccaatca gtgcgccaac gcccaaaatc accccaacag ccagtgcttt gccattttca
    24601 gcaaaaaagc gtttaaccgc ttctacctgg tcgttttcgt tctcgtaaat ttccacgctg
    24661 tccttctcct tccttaaccc agtaacgtgc gcaaatgcgc ggctacgcta tcctgcgcaa
    24721 ctgccgtttg ctcaccagag cgcaaatcct tcactactgc tgtgccgtta gccacttcag
    24781 actcacccag caccacagca acgcgggcac cccatttatc agcacgggca aactgtttct
    24841 taaagttgcc gccgccgtgg ttggtcatca atttcacgcc cggtaattca tcacgcagac
    24901 gctcagctaa tgccatagcc gcagattgtg tatcagcacc tgaagccacc aggtatatat
    24961 cgacaacagg atcggcttta aattccggat taacggcctg tactaacaat acaagacgtt
    25021 cgaggcccat cgcaaaaccg acagccggtg ttgcacgacc gcccagttgt tccacaagac
    25081 cgtcataacg accgcctgca cacacggtgc cctgggagcc gagactgtta gtcacccact
    25141 cgaaaacggt acggttatag taatccagac cacgcaccag acgctggttt acggtgtaag
    25201 cgatccccgc gctctccagc agtttgcaca gaccggcaaa atgctcacga gattcctcgt
    25261 ccagataatc acctaatgcc ggagcgtcgt tgagaagcgc ctgcacttcc ggattttttg
    25321 aatccagcac gcgcagcggg ttagtgtaca tgcggcgttt gcagtcttcg tccagctttt
    25381 ctttatgctg ctcaaggaat gccaccagcg catcgcggta attggcgcgt gcttccagcg
    25441 aaccgataga gttcagctca agagttacgt gctcggaaat acccagcgcg cgccaccagc
    25501 gggcagtgag cataatcagt tcagcgtcga tatccggacc ttgcagaccg aaaacttcgc
    25561 agcccaactg atggaactga cgataacgcc ctttctgcgg acgctcgtga cggaacatcg
    25621 gcccgatata ccacagacgc tgttcctgat tgtacagaag accatgctcg atgccggcgc
    25681 gtacacagcc cgccgtccct tcagggcgca gagtcaggct gtcgccattg cgatcctcaa
    25741 aggtgtacat ctctttttca accacgtcgg tgacttcacc aatcgcacgt ttgaatagcg
    25801 gggtctgctc tacaatcggc aagcggattt cactgtaacc gtagctgccg agcacgtttt
    25861 tcagtgtgcc ttcaatgcgc tgccagatgg tcgtttcgcc aggcaggtaa tcgttcatgc
    25921 cgcgaatggc ttgaatgttt tttgccacgt ttattctctt tctgaatata aaaatgaacc
    25981 ctcaacgctt ccctcaatgt ttcgggagcc atgcgggtcc aatcatacac gggaagcgag
    26041 gcgcttccca tcacgttatt atttttcaac ctgctgaacg tcaattcgac gcgcttcatc
    26101 cagctgactg gctttcgcac gaatgcgtgc ttccagctgg tcgatcatat cgttgttgtc
    26161 cagacggtct ttgcgcacgc catcttcata gaggccgctt ttcttgttgc cgccggtgac
    26221 gccgagtgta gaaaccagcg cctcacctgg gccattcacc acgcagccga taatcgaaac
    26281 gtccatcgga gtgatgatat cttccaggcg ttgctccagc gcgttaaccg taccgataac
    26341 atcaaattcc tgacgcgaac aggtcgggca ggcgatgaag ttaatccctc gcgaacggat
    26401 acgcagcgat ttcaaaatat cgaaaccgac tttgatctct tcgaccggat cggccgccag
    26461 cgatacgcgc agcgtgtcgc cgatgccttc agacagcagc agacctaaac caatggcgga
    26521 ttttactgcc ccgctgcgcg caccaccggc ttcggtgatc cccagatgca gcggctgatc
    26581 gatctgtttt gccagcaaac gataagactc aacagcgagg aagacgtcag acgctttcac
    26641 gctgactttg aactgatcga agttcaggcg atcgagatga tcaacatggc gcatggcgga
    26701 ttccagcaac gcctgcggcg tcggttcgcc atacttttct tgcagatctt tttccagcga
    26761 tccggcgtta acgccaatac ggatcggaat gtttttatcg cgcgcacagt caaccaccat
    26821 gcgaatacgc tcttcattac cgatattgcc agggttaata cgcagacaat cgacgccgta
    26881 ttccgctact ttcagcgcaa tgcgatagtc gaagtggatg tcagccacca gtggcacgtt
    26941 aacctgctgt ttgatgagtt tgaacgcttc tgccgcgtcc atcgtcggta cggagacacg
    27001 gacgatatca gcgccaacgc gttccagcgc cttgatttga ttgaccgttg cttcgacgtc
    27061 tgtcgtacgc gtattggtca tggactgtac ggcgatggga gcaccatcgc caatcggcac
    27121 attcccaacg taaatacgtg ttgattttct acgttgaatt ggagcctggt tatgcatgaa
    27181 aaatctcccg cgttacccgt ctgttactgc gccggtgatt gttcggcatt gagggtcaga
    27241 cgcgcaacct ggttagttct gataaaacga ctcagatcga caggtttccc ttgatactgg
    27301 atctgtactg cggctggcgc accaattttc agtttgtacg gtgcctggcc ggttaagttc
    27361 aaattaccgt ctttacgctg cataccgcta aacaattttt taccggtagc atcagtgacc
    27421 tccagccagc aatcggcagt aaagttcatc accagcgcat tcggatcagc caccggcgtg
    27481 gtcacgccag cctgatcggt tggcaacggc gcagcaccat ctggcgttgt tgctgccgtt
    27541 ggtgccgggg tcgcggcggt atcaacattt gcctgcgaag gcgaaacaac cgcattctgt
    27601 tgcggatcaa cagctggtgc tggcgcagtt acggcaggtg tttgcgtgtt ggttgcggta
    27661 gtatccacag acgctggcgg cgtggacgtt gtagccgggt ctgtagttgt cgacgtattt
    27721 aacggaacac tctgcccctg ctcgctatta ctgctcagtt ccgccgaaga ttgatcggcc
    27781 atcgtggtga tctcttcctg ctgagctttg tggtcttgcc accaccaggc accgctcagg
    27841 ccgataacca caaacaacac cagccaggtg aaggtcatca accagccgtc gcgttttttg
    27901 cggcgtttac cgagggaaaa actctgcatc ggcgcaactt ttgcagcccg aagtggagcc
    27961 tgcttttcca gccctggcag cagttcttct tctggaatat gtaccagacg cgcataagag
    28021 cggatatatc cgcgcaggaa tgttgaagca agatcggcgg gtgccttatc ttcttcaatg
    28081 tcgcgtaccg tggaaacctt caggcaaagt cgctcggcaa cggcctgctg actaagtcct
    28141 agttgttcgc gagcattacg caggcgagcg ccggtagtaa gtgcttcatt ttggtcgtgc
    28201 gtggcttcag tattcattcg ctgcaggtac gtttaaatga gaattgagat gccggtgaac
    28261 catcatgctc acccacaccg cgaaacatcc gttaagttaa ccgttatcat acagtataag
    28321 accgtctgtg tgctcgtgac aaagcccaca ttcactaagg ctaacttact gttgcatcgt
    28381 tacatactgc cttaaagtca gcaaaaacgc accgttaata ttgaccagac aattgcaact
    28441 taatacttca ttcataaaag attacgccac ggtacataaa gtaaccatgg cgtaatggct
    28501 atcagaccgc tttaatgtcg atggcttcac cctgcatccg cttacgcagg gtacgtttcg
    28561 tacggtcgat aacatcgccc gccaactgac cacaggcagc atcgatatca tcaccacgcg
    28621 ttttacgcac aatagtggtg aaaccgtagc tcatcagcac ttttgagaaa cggtcgatac
    28681 ggctgttcga actgcgttca tacggcgcgc ccgggaacgg gttccacggg atcaggttga
    28741 tcttacacgg cgtatctttc agcagctccg ccagttggtg cgcgtgttca gtgccgtcgt
    28801 taacatggtc aagcatcaca tattcaatag tgactcggcc ctgattggcg ttggatttct
    28861 ccagataacg gcgcaccgca gcaaggaacg tttcgatatt gtactttttg ttgatcggca
    28921 caatttcgtc acgaatttcg tcgttcggcg cgtgcaggga aattgccagt gcaacgtcga
    28981 tcatatcgcc cagtttatcc agcgccggaa ctacaccgga agtagaaagc gtgacgcgac
    29041 gtttagacag gccaaaaccg aaatcatcaa gcatgatttc catcgccgga acgacgttgt
    29101 tcaggttgag cagcggctcg cccatgccca tcatcactac gttagtgatt gggcgctgac
    29161 cggtgacttt tgctgcgccg acgattttcg ccgcccgcca cacctggccg ataatttccg
    29221 acacccgcag gttgcggtta aagccctgct gggcggtgga acagaattta cactccagcg
    29281 cacaccccac ctgcgaagag acgcagagcg tagcacggtc gtcttccggg atatacaccg
    29341 tttcgacgcg ctgatcgcct acggcgatcg cccatttaat ggtgccgtca gatgaacgct
    29401 gttcttcaac cacttccggt gcgcggatct ccgccacctc tttcagtttg ccgcgcaaca
    29461 ctttgttgat gtcggtcatc tcatcaaagt tgtcgcagca atagtgatac atccacttca
    29521 tcacctgatc ggcgcggaag ggtttttcac ctaaatcttt aaaaaactcc cgcatctgct
    29581 gacggttgag atccagcagg ttgatttttc catctttcgt ggtgacgttt tcaggtgtga
    29641 ctaattgttc agacatatgc tattccggcc tcgttattac acgttatggc ccctggaggg
    29701 ttgaaaaaag aaacgccccg gtgagcggct gctcgtccgg gggcgctgca ttgtacaaat
    29761 tctggcgcac ggatgccacg tttgcacgcg gcatttacga aattattaac gggtgcgcgg
    29821 gcacacttcg ccttcgccga agaaataagc gatttcgcga gcggcagatt cgacggaatc
    29881 agaaccgtgg gtaccatttt cggtcaggct gtcagcgtaa tcagcgcgca gagtaccggc
    29941 cagtgcattt gccggattgg tcgcgcccag cagatcgcgg tgacgctgaa cggcgttttc
    30001 accttccagc acggaaacca cgatcgggcc agaggtcatg aattcaacca gaccatcaaa
    30061 gaacggtttt ccatcgtgtt cagcataaaa gccacgagcc tgttcaacgg tcaggtgcag
    30121 cattttggtg ccgacaattt tgaaccctgc agcttcaaag cgcgcaaaga tattaccaat
    30181 gacgtttttt gctaccgcgt tcggtttgat gatggaaaaa gtacgttcaa tagccatttt
    30241 tacctctgta aattgttctg ttgttgtctg taccagcgta cgagatggcg cggattataa
    30301 tgagcaacag ggccgttgac tattgatgaa ggtaacattt ttttaaaata aacctagttt
    30361 aagcaacaat cagggacaaa acagactatt gcatgacaaa tttcactgtc gctatttgcc
    30421 ctacgtcatc catcaccagc aattgataat cacctttatc cgtcaaatgc agggtcacgt
    30481 tgcgcccgcg ttcagttaac ggttcgccat tcagaaacca ccagcgttca cctgcccctc
    30541 cacttgattg caacggcaaa gtcgcttccg ctgcgcccgg taaacgttta ataatcgcgc
    30601 catcgcgaac gcctgtcagc tgcagcggga gctgggcatc gtgaccgtat ggcgggcaaa
    30661 ttgtcgaggc cggtggcaag cgcacagcgc gacgttctga tgcgggcagc cagggttcca
    30721 gcggtagcgg ccagacattt atcatttctt gtcgcgcttg cgggcaatca gcggcaacac
    30781 gtttgccatt ttcatccagc cagatgggga aacgaatgcc attaatgcct tcctgctccg
    30841 gcagtaatag agttggcggc tgactcccgt ccagcagcca ggttgccagg cggcggcgac
    30901 agttaccgtc accttccggc aaagactgtc cgcccggcca gcagataacg ccacgagtga
    30961 ctgagttcgg gcgcgggtct tccggaagat tagcactgcg cgacagtaag atattattga
    31021 cctgattcaa caatggtacg gcactggcaa agccaaactg accaacaacg ggcgtgccgt
    31081 ccggtctgcc agtccagatc ccaataacat agcgagcgtt aaccccaatc gcccaggcat
    31141 cacgatagcc atagctggtg cccgttttcc atgccagtgg ggcgacgcgc ggcaaagcac
    31201 tatccggtaa gggttgcgct tcatcagcca taatccggcg aatgatccac gccgcccccg
    31261 acgacattaa aggccgttca agcagcggat cgtcaggctg taagcgcaat ttaccggcct
    31321 tgccgtggcg agcaaacgcg gtatacgctg ccgccatatc ttccagtttt gcaccagcgc
    31381 cgccgagaat gagcgaaaga ttcggcgcag caccgttggg cagatacaac ggcaatccaa
    31441 cattgcgtaa ttttgccgca aaccgtttcg ggccataggc ttccagcacc tgcacagcag
    31501 gtaaattcag cgagcgcacc agcgcctcgc tcatgctgat cgggccatga aaaccgctat
    31561 caaagttacc tggtcgataa tcaccggtgc gccgggggac gtcttgcagc agtgatgccg
    31621 ggtggatcaa gccttcatcc agcgccagac cataaacaaa cggtttgagc accgatcctg
    31681 gcgatcggat cgcattgacc atatcaacat gaccaaagcg tgaatcatcg ttgagatcaa
    31741 ccgatcccac ccagccgcga acacgcatat cggtatgatc aaccacgatc atcgccagtg
    31801 agctgcgcgc cggcaatcgt cctttccagt tttgcgccag ttcttccaga cgtcgttgaa
    31861 gaccggcatc cagcgtagta acgattttgt cgcttttgct tttaccgagc atcatgcgcg
    31921 aaaacagcgg tgccagttgc ggcatttgtc ggggtgccag ccagatgggt tcttcccttg
    31981 actcttttac ctgctcacgg gaccacacac cttgcgcagc catccgttcg agcactttat
    32041 tacgcgcggc ttcggcacgc tccggccaac gatccgggcg aagacggctg ggcgcttgcg
    32101 gcaaaaccgc cagcattgcc gcctcggaat agcttaaatt cgcaggcgat tttccgagat
    32161 aagaccaact tgccgcaccg atcccctgca acgtaccgcc aaacggagcg cggttaagat
    32221 acaaggtcag aatttcacgc ttagacagat gccattccag ttgcaacgcg cgccagagct
    32281 ggcgaatttt gccgccaaat gttttggggt gaggatcaag cagacgagca acctgcatag
    32341 tgagcgtgct gccaccggaa ataacccgtc ccgaagtgag atcttgccat gctgcgcgcg
    32401 ccaccgagaa tggattcacc cccggatgct tccagaacca gcgatcttca taattgatca
    32461 gcgcttcaag gtaacgtgga gaaacatctt cgattgttac cggataacgc cagatgccgt
    32521 cagcatcggc gaagcgccag agcggcgtac catcctgcgc cacaaccact cgtgcgggat
    32581 tgacttcatg cagcggtaga ggccagagtt tatctgctcc ccacgctgca agaaaaagga
    32641 gaaagggcgc agttgccagc gttatccagc agccgcgttt ggttaacaag cgaggcattt
    32701 acggtctgac tatcagcaaa tcttcagccg cgccggtcgc ccgccattgg ggaacataca
    32761 ttgattccac catcggttgc ggtacctgat acgttcccgg cgtcaccgcc cgcgccagat
    32821 acaccagcgt taccggttgg tattcatcaa cggcaaccgc cgccacaaag cgatcgtcac
    32881 ggaactcaat gtgcttaata ctcgcctgct gcatctggtt cagtaagttc tgcacttcgc
    32941 caccactttg ctccaggctg gcgctaccgt tcgccagatt ctggttttcc agttccagac
    33001 ccgcaggcag cagatccacg actaacgcat ccggcacgct gttactggct tttacctgca
    33061 accacaccag caccagatcg ccgctacgta acgagtccag cgatttgctc ttaccatcag
    33121 taccaagaat atgacgctcg atttgcagca cattgttcgc cggtaaaggt gcggattgcg
    33181 gataaccgct ggcatccaca cgcagccata acggctgatc gccactgttg ctcacctgca
    33241 aggtggcaag ttgatcgcta ttcagattgc tgttttgcgc tttctcgcct gtcagcggct
    33301 cagctgagaa agaggtttgc gcctgccatt tacccggtaa atcctgaatc gtacgggcag
    33361 ccaggaacaa cgcgttactt tcctgcgtcg atagccagcg ttcaccaaac gcctgctgcg
    33421 aaagtgtgtt cagcaaagtg tactgctcat cgggtagcag tttattttct tccagcaagg
    33481 agagcattaa cgcgttgtcg cgcagtggac taccgtaatc acccagccat atccgctcat
    33541 cactatttct cggcgttttc agcgccagca caatcgcttc ttcaccacgc gttgcatcac
    33601 ccatggtttt cagcgcaacg ccaagttgca gcagcggtaa accagaagcg gcatctgcac
    33661 gatgctccca gatttcacgc agcgcaccca gcggagcctt ttgctgacgg gccaacacca
    33721 gcgcagcgta agactgtacg gcgaatttac tagctttgag attatccgcg tacgggatcg
    33781 acatcatgcc cggatcttgt aaatagcgca gcagacgctc attaccccgg ttaatggcgt
    33841 ctgtcggcac gctgtaaccc tgttcgcctg cgcggaccag gaaatccagc acgtaagccg
    33901 tcagccagta ctcttcgtca ccgtttttat cccacagcgc aaagccgccg ttatcacgtt
    33961 gcatttgcag caaacgggaa atgccgatat cgaccgatgc acggcgtttc tcatcactgt
    34021 cgcctttgat gcccaacgcc tgcagttggg ctgcgttggt ataaagtgac gggaacaggc
    34081 cgctggcggt ttgctcaaga cagccgtacg gatacgcttt taactctttg atataacgtg
    34141 cgatgttcag cggtggtttg ccgctcaaca acaattgccc ttccagcgta acaggcgaga
    34201 agttttgcaa tccatccgcc ggaatcgccc atatctcacc aggctgtaac gccgtaccgt
    34261 aattaaccgt ttgtgccggg aacgccggac ggacgccgat tttccactgc ttatgctgat
    34321 cggcaacggt ttcacccggt aacgctaacc cgctaatggt ggcctgaatt tctccatcgc
    34381 cataacccgg caatactcgc accgggataa acagcgtagt acgcacacct ggcgctaatt
    34441 caacggctgc gggtgaatcg ctgaccagtt caagcaaacc actggcggtc agggcaacgt
    34501 tcagtttttg cggtttatcg gtaagattag tgatatccag cgtcagacgc gaggtatcgc
    34561 cactcgccat aaagcgcggc atgttcagtt cagcaatcac cggtgcggca actatcactt
    34621 tgctttcgtt gctaccgaag tcatctgccg tccaagcttg cgccatgacg cgcaattcac
    34681 cgttaaaatc gccaatcggc agtgtaaccg agccttcgcc ctgttcgttg aacgttaccg
    34741 gcagcgcctg ctgcgcgaca atattgacgt gattgaccgg cggtttacca ccacgtttca
    34801 gctcatcacc atcgccaccg aaacgcagag ctgccagacg cccctgacct tcaataacct
    34861 gaccgtaaat atcgtaaatg tctgcgccat agcgtttctg accaaagaac gcctgccacg
    34921 gatctggcgt gacgtagtca gtaatattca gcacaccact atcaacggca gacaccagca
    34981 cattcacctg tttaggcttc tcgccatttt tagtgctggc tttaattttc acggttaatg
    35041 gttgattggg acgcattttt gctggtgttt ccagcgccag atcgaggcga cggttttcat
    35101 caccaagcgg cagatgtaac acaccaaccg cgcgttttgg cgtcgcggag cgagatttat
    35161 cgccaggacg caccaccagc gtacttaaat acagatcatg acgattccag gttttatcga
    35221 ccggaatcgt cagatcctgc ccttgagccg gaacatcaat ctcttgccac cacagcggcc
    35281 cttcactgga ctcgaccatc gcataacctt tacccgccgt tggcgcggca atatgcaact
    35341 taatggtatc gccagggcga taactggctt tatccagttt cagcgtgaca cggtcgggtc
    35401 gcacggtacc gctcccgtcg ctgttgtcct gccagctata gccagcccag aaacgcacgc
    35461 tactgaccgc ttcattcgga gctttgactt ccagacgata agcaccccac tctaccggga
    35521 aactgacctt accggtttca tccgcctgaa gatccagagt ttgttcattt tcgatcagat
    35581 ctttttgatc aaactgtgac tgccagcctt catcttctga ccagttccag tagtaatcgc
    35641 ggcgttcgcg aatcaggcac acctgcaagc ccgacacggc ttttttcacg ccttgcgcat
    35701 cgctataaac gatgtcaaaa gcggcgttac tgccttcatc aacaatgggc tgtttcaccg
    35761 tgctgtcagt acgataatcg taaaccgatt tcgaggcgaa ctgcggacgg atccccggca
    35821 atgcatcggc aggccagata gcctgctcag cacggcgcgt caccgggcga ccgcccgatt
    35881 ccagcaaact accctggaaa ataacctgta atggggaatg cgtttccttc cactggcttt
    35941 ctgtagaaac ttcgccgcgc cctttatcat ccagcgtcaa ctgaacttca tccagcgtgc
    36001 gggaaaggtt ttcggcagct atatcgccga attcaaaacc aggtaaggct gacacagcgt
    36061 cacgcagtgg gcgcaggaaa agttgccctt gcaaagtatt accattagca ggtgcaccgt
    36121 acaggtagta ccccaccacg gagaatttca cttcatcttt cggcataagc ggggttttct
    36181 caccggtcag attcagcgcc atacgctctg gcataaaatc ttcgacgtgg aaatcccaca
    36241 tccggtactg gttatcgccc gtgttggcgc gaatatgcca cataccggtt gccgcattgc
    36301 tatcgagtgg ccaggtaaag tggtagaggc cattctccgg ctgactaacg acgctcctga
    36361 gtacctgccc gtcaggttta atcacgtcta acttgatggg ttgatcgggc aatgctttac
    36421 cgtctgcatc gcgcagtaaa ccattgagga ttaccgtttc acctgggcga taaagatcgc
    36481 gtgggccaaa catgaaaaac tgtttgctat agcctggcgc gccagcaatg ttaaattctg
    36541 ctaagtccag cgccggaagt tttaaatcga gtagcgttgt ctgaccgtct ttacgtgcca
    36601 gcagtaatgc cgcattttta tcattttcca gctgcacatg cccctgagcg tcactggttg
    36661 cctgagtcag agtctgccct ttctcattta ataaagagac ttcaattcct tgctgggccg
    36721 cgccgttttc caaactttgg gtaaagatat ccagacgatt gtgataacgg tgagctgaaa
    36781 cgccgatatc acttaacgta aacagcgtcg cgggattact gtaatcgtaa cgtccagcct
    36841 gattcatcac agccagatac acgcccgcct gctgaagcgg tttgatatcg cccagcggca
    36901 gcaataattt ttcacgggtg ttacgcgcag gattgagatc aaaccgtccg gtgtagacca
    36961 gatccgccat ctgcagcagt ttgtctgact gccagttcgc cagcgaattg cggtattccc
    37021 attggctaat gaatgctggc agagattctg gcttaacgcg gaagaagtta acatcgacat
    37081 tattaacgtt gagcgccatt accggcagcc cttcaacgac tttaccaggc agcagcgaac
    37141 cacggctggc aaaaccgacg ctgggttgga tgtcgcgggt agttatagtt ttttcgtaat
    37201 ctttactgaa ggttgcgttg ttgagtgctt tgacctcctt gccaatagta acgatcaaat
    37261 cacgtttcgg ttcgaggtgg cgtaaacgca gctctttaag attatctgac agctcccagg
    37321 caccatccac tttgccgctt tttttatcga cgacatgaat aacgcgtgag aaatcctgat
    37381 ccgggtcgag agggatggag aacgtcagca ccagcgtggc tgcaccatca agttggactt
    37441 cagagagatc cagcaatgtc agcaccttac cggcactctg ttgggccagt ttttgtcgct
    37501 ccggcacgga gagttttgct gaactcgcgt tttctgaaga ggcagcttta gtaacttcag
    37561 aaggcgcatc ttttttcacc gctgttggcg cgttatcgtt gttgtcgcac cctgccagcg
    37621 ccagcattag catgcaggcg gctacgcgta actttttcat ttttcatccc tgccacaatg
    37681 gcccgttagc aacgtcgaat aattattatg cgtgagaatt tacgttatgt aattcagtat
    37741 cacgcccata caatccgaat tttagtgaga attgtggctc agacagccaa atcagcctct
    37801 tttgcttgtc gcttttcact aaacatccga caatttagcc taaccccggc aaaaatggag
    37861 atgcctatgt ccacgacatg gtttgtagga gccgactggc tcgccgaaca tattgatgac
    37921 ccggaaattc agattatcga tgcccgcatg gcgtcgcctg gacaggaaga tcgtaacgtt
    37981 gctcaggagt atctgaatgg acatattccc ggcgcagtgt tttttgatat cgaagcgctt
    38041 tctgatcaca cttccccgct tccgcacatg ctgccgcgcc cggaaacgtt cgccgtggcg
    38101 atgcgtgaat taggcgttaa ccaggataag cacctgattg tctatgacga aggtaatctt
    38161 ttctcagccc cacgagcatg gtggatgctg cgcacctttg gtgtagagaa agtgtcgatt
    38221 ctggggggtg gacttgcagg ctggcagcgc gatgacctgc tattagaaga aggtgcagta
    38281 gatctgccgg aaggagagtt taacgccgcg tttaatcctg aagcagtggt gaaagtaacc
    38341 gatgtgttat tggcaagcca tgaaaatacg gcgcaactta ttgatgcccg cccggctgca
    38401 cgttttaacg cagaagttga tgaacctcgc ccaggtttac gtcacggaca tattcccggt
    38461 gcattgaacg ttccgtggac ggaactggtg cgcgaaggcg aactaaaaac gaccgatgaa
    38521 ctggatgcga tattttttgg tcgcggcgtc agctacgaca aaccaattat cgtcagctgc
    38581 ggctctggtg taacggcagc cgtggttttg ttagcactcg cgacgctgga tgtgccaaac
    38641 gtgaaactgt acgacggcgc atggagtgaa tggggcgcgc gggcagattt accggttgag
    38701 ccagtgaaat aagtatttta caggcaataa aaaaccgccg aatttggcgg ttttttattg
    38761 ctggtctggt tcgcggcctg tccagcaggt tgacttgtgt tgccggagca acgcaggcac
    38821 cccacagtgc ttgctatcgc ggcaatatcg ccagtggtgc tgtcgtgatg cggtcttcgc
    38881 atggaccgca caatgaagat acggtgcttt tgtatcgtac ttattgtttc tggtgcgctg
    38941 ttaaccgagg taaataataa ccggagtctc tccggcaaca atttactggt ggttaacaac
    39001 cttcagaaca gcaggtaagc ccgaatgccg ccctttgggg cggcatattt tagattatcc
    39061 gattctgttt aaagtcacgc aaaaaaccac cccagcgacg ttcatagaat ggcgcaatat
    39121 gttcgatatt aaaataacct gacttattag tccgaattca gacaaatata aacaattttc
    39181 gcttaatatt aaaaatacta accgataaaa gatattactt gaacatgtaa attcactttc
    39241 tttaaacaac aaaaaaccgc caaaaacagg cggttatttg ttgccggttt ggttcgcggc
    39301 ctctccagca gattgacttg tgttgcatga gcaacgcagg tgcttcacag cagagcaata
    39361 ttctgccagc aactctcttt ttgtcaagca aaagagagta attattgttt atttagcgta
    39421 ttatcgacac aggccctttc cgccgtctcg caaacgggcg ctggctttag gaaaggatgt
    39481 tccgtggccg taaatgcagg tgtttcacag cgcttgctat cgcggcaata tcgccagtgg
    39541 tgctgtcgtg atgcggtctt cgcatggacc gcacaatgaa gatacggtgc ttctgtatcg
    39601 tacttattgt ttctggtgcg ctgttttccc aagtaaataa taaccggagt ctctccggcg
    39661 acaatttact ggtggttaac aaccttcaga gcagcaagta agcccgaatg ccgcccttta
    39721 gggcggcata ttttagatta tccggttctg tttaaagtca cgcaaaaaac caccccagcg
    39781 acgttcatag aatggcgcaa tatgttcggt aataaagtgg ctaattcctt tttccccttt
    39841 tttcacctga caaatatcga ttggttcatc accaggtaat gtatcggtcg ctacacttcc
    39901 cgctgcctga ataatttctt cgatatcacc atcggcttca atgccaataa gtaaattagg
    39961 ctgtgcctct tcgttctctt taattgaaca aataaaagca cgcttcaccg gcttaatggt
    40021 tttaaataag gtggtgagtg aatcaatcat ttgtgctggc ggctctgcga cttccgataa
    40081 tatcagcgat tcaccgcctt ccagtacttc ctggctactc agcggattcc cttcttcacc
    40141 aatcaacaaa ctgatttcac gcggcataaa ctctttaccg gttggcagtt tggcattaag
    40201 gaatagcgtt tcgccaagtg ttatctcaaa caatgtgcga acgggcatta cgacaaatgc
    40261 ctgttcgtct tcaaccgcct gttgaagtgc ttctaacgag gtaaaaaaag gaatgacgct
    40321 ggtgccgtct tctttttccc agtgctgtaa atcaagcgcg ctatcttcaa ccacagcctc
    40381 gccctgcgcc gccgtacccg gcacccagac ggtagatccc agtagagtac ggaaaaaggc
    40441 cgggcggtgc gccggttcgg ttgctgcttt ttccagcagg tcttcaagtt cgttttttgt
    40501 ttcggacata agaaccacaa ttcattcaac gttcggggca caagtgcctg atgcgctatg
    40561 cttatcaggc ctacaaggga ttcacaattt gttgaatttg caatactttg taggccggat
    40621 aaggcgttta cgccgcatcc ggcatattag tttacgccgt taacagatta gcaatcgtgc
    40681 gcacaccaag tcccgtagca cccgcagacc actgttcaac cggcgcttta cggtaagtcg
    40741 ccgagcagtc gatatgcagc cagccttgct gatagttctc aacaaagtgc gacaggaagc
    40801 ccgccgccgt gcttgcacct gccggatacg ccgcgcttcc ggtattgttc agttcggcaa
    40861 agttagacgg cagctggctg cggtggaact ccgccagcgg cagacgccag aacggttcat
    40921 tctcttgtga ggcactcgcc agcaagcgag cggcaagcgc atcgtcaaaa ctgaacagcg
    40981 cgtgataatc attacccagc gcggttttcg ccgccccggt gagggtcgcc gcatcaatga
    41041 tcagttccgg tttctgcgca ctggcatcaa tcaggccatc tgccagcacc agacgccctt
    41101 cggcatcagt gttcatcact tcaacttttt taccgttgcg ataggtgatg atatcgccca
    41161 gcttgaacgc attgccgcta atcaggttat ccgcacagca gagaaacagc ttcacgcgct
    41221 tgttcaatcc gcgcgtaatg gcaaatgcca gcgccccggt aaccgttgcc gcaccgccca
    41281 tgtccgactt catcgagtcc ataaacgcag tttgtttgat gctgtagccg ccggaatcaa
    41341 aagtgatgcc tttaccaacc aggcacgcgt acactggcgc ttctttatcg ccagttgggt
    41401 tgtaatccag cgccagcaat accggagaac gttctgaacc gcgtccaacg gtgtgcagcc
    41461 ccatataacc ttgctcacgc agatcttcgc ctttggtgat ccgataagtc acacgatcgc
    41521 ccgcgacgtt gctgatcaga tcaacagcac gctgtgccag ttgcgatggt cccaattctt
    41581 ctgccggtgc gttgatggtg tcacgcaccc agtcgatgat catcaggcgg ttatccagtt
    41641 cctggcgctg ggcatcgtcc agatccggcc actccacttt acgcgtacct ttcggagctt
    41701 tgtaaccttg ccagaatgcc cagcagcgat ccgcatccca gccttcaccg cttaactgaa
    41761 catgcttgat gcccagaccg tcaatcttgc gcgccgcacg ctggatcagc cccagatcgt
    41821 ctgccccgtt caaatgcagg gtaatgccat cattattaat gctgtaagtt gctttttctc
    41881 cccagcgcgc gtcggcaggt tgggtagaga gggtaatttt catcgcttct gtcattttag
    41941 ttatccttat tcgtttaaca gcaaaacggg ctaccccagg cagcccgttc attcactcgg
    42001 cttcgtccag ccagactaac aaaatcgctt cgaggatttt ctcgttggat gcctgcgggt
    42061 cgtcgtcgaa atcttccaga tcgcaaatcc actgatgcat atcggtgaat cgaaccgttt
    42121 tcggatcaag atcaggatac gcatcgtaca gtgcttcgcc aatttcgcgg ctatcggtcc
    42181 acttaagtcc catactaacc tctgttaatg ctcacgcgca tggttgatag tgtaacgcgg
    42241 gatttcgact actaaatctt cgtcggtaac gcgtgcctgg cagcttaaac ggctttcggg
    42301 ctccagtccc caggctttgt ccagcatgtc gtcttcctgc tctgagcttt ctggcagcga
    42361 gtcaaaacct tcacgaacga tgcagtggca ggtggtgcaa gcacaggatt tttcacaggc
    42421 gtgttcaatc tcgataccgt tacgcagagc tgcgtcgaga atggtttcac cgctattagc
    42481 ttccagaaca gcgccatcag gacagagatc ctgatgaggc aaaataacaa tctttggcat
    42541 attaaacctc gtccacggaa tggcctttca gcgcacgacg aaccgactgg tccatgcggc
    42601 gagcggcgaa atcctgggtt tgtttgtcta cgtttttaat cgcttgttcg atggcgtcaa
    42661 cgtcatcgcc ctgcgccact tcactcaggt gagcggcagc atcgtcaatg acctgacgtt
    42721 ctgcggcgct taacagcgcg gcatcagcag ccagcgcgcc gtgcagactt tccagcacac
    42781 gcgccgcttc tactttttgt tctgccagca ttcgggcttt tacgtcctgc tcggcatagc
    42841 tcattgagtc tttgatcatc gaagcgattt cgctatcggt cagaccgtaa gacggtttga
    42901 cctgaataga cgcctcaacg ccggtggatt tctccatcgc cgtcacgctc aaaagaccgt
    42961 cggcatcgac ctggaacgtc acgcgaatat gcgcaccacc agccggtagc gccggaatac
    43021 cacgcagcgc aaaacgcgcc agtgagcggc agtcctgcac cagttcgcgc tcaccctgca
    43081 ttacatggat agacatcgcc gtctgaccat ctttaaaggt ggtgaaatcc tgagcgcggg
    43141 ccaccggaat agtggtatta cgcggaatca ctttctccac caggccgccc atcgtttcga
    43201 ggcccagcga cagtgggatc acatcaagca gcagcatttc gctgtctggc ttgttaccca
    43261 ccagaatatc cgcctgaatc gccgcgccaa tagcgacgac tttatccggg tcgatggaag
    43321 tcagcggtgg acgaccgaaa aattcgccta cccgttcacg caccagcggc acgcgagtag
    43381 aaccgcccac catcaccact tccagcactt catcagcttc tacacccgcg tctttcagcg
    43441 cgcgacgaca agccagtaag gttcgtttta ccagtggcgc gatcagttca ttgaattgtt
    43501 cacggctgat ttcgccctgc cagcccgcaa cgttaacggt cacggagtcc gcatcgctca
    43561 gcgcgatttt ggctgcaatg gcggcatcca gcagttcacg ctgaacgcgg ttatcgctac
    43621 gatcaggaat gcccgcctgc tcgcgaatgt aatccgccag cagatggtcg aaatcatcgc
    43681 cgccgagcgc ggaatcaccg ccggttgcca gcacttcaaa cacgccgcga cttaagcgca
    43741 gaatggaaat atcaaacgtc ccgccaccga ggtcataaac agcgatcacg ccttcctgac
    43801 cggaatccag cccgtaggcg atagccgcag cggtcggttc gttaagtaag cgcagaacat
    43861 gcaaccccgc cagacgcgcc gcgtctttgg tgccctgacg ctgggcatcg tcaaagtacg
    43921 ccggaacggt gataactaca ccatccagct cgcctgccag ggcttcagtt gcccgcgccg
    43981 ccagtgcttt gaggatgtcc gcagaaacgc gcaccgggtt cagtagcccc gccgccgttt
    44041 caatcatcgg caggccgttt tcgctggcct ggaattgata aggcagatgc ggatagcgtt
    44101 gctggatatc agccagcgag cgccccatca ggcgtttaac agaactaatg gtgttggcgg
    44161 tgtcaagcgc tgcgttagta cgcgcgtcat aacccaccga atgcccttgc tgttgatagt
    44221 gaacaacaga tggcagcagg tgacggcctt catggtcggc taacgtttcg gcctgaccgc
    44281 tgcgcactgt cgccaccagc gagttggttg tgcccaagtc aataccagcc gccagacgac
    44341 gctgatgcgg cgcagcactc aaaccaggtt cactaatttg taataaggcc atgtttagct
    44401 tccagaaatt aaaaatcgag cagtttttct tcgagttgtt cggcactgct ccgcagttta
    44461 tcgagaaaac gcagcttacg cacggtatcc gccgccgcgt cccacgcctc gttgtctaac
    44521 tgttcaacca tcaactgatg gcgggtatca aacatctttt tcacacgttt gataaagctt
    44581 tccagccgcg cttcatcttt cgcctgttcg atctcgtcca gctcttcgcg cagctccaac
    44641 tgttccatca ggaacgcggt gtcgcgcaca gtatgctgct cgctggcgag atcaaaaccg
    44701 tgtaaagaaa gcaaatattc cgcgcgcatt aacggatgac gcagcgtttg ccaggcctgg
    44761 ttaatggttg cagattgctg tacggcggcg agttgttccg cctggcttcc gctggcgaat
    44821 ttatcaggat gatactgacg ttgtagatcc tgaaaacgca ggctcagcgc ctgggtatcg
    44881 agttgataac gggcaggcaa gccaaagagg gtgaagtaat ccataacatt ctcagggctg
    44941 cgatccgccg cgataacggc gaatcaggta aaacaaaccc cacgcgcagg cgaccacggt
    45001 ggggttatcg gtatgcgcat caaacgtgga agctttcgcc gcaaccacac tcatctttga
    45061 cgttcgggtt ggtaaattta aacccttcgt tcaggccttc ttttacgaag tccagctgcg
    45121 taccgtccag aaattgcagg cttttgccat cgaccacgac tttcacgcct ttgtcttcaa
    45181 acacgatgtc ttccggcgtc ggttcgtcaa caaattccag tacataagcc atacctgaac
    45241 atccggaggt tctcacgccc agacgcaggc caaacccttt gccgcggtta gccagaaagg
    45301 tatttactcg cgctgctgca ctgtcgctca gtgtaatcga cataaccaaa cctcaactct
    45361 tattttgctt cacgtttgct tttatagtcc gcaatggcgg ctttgatcgc gtcttctgcc
    45421 agaatagaac agtgaatttt caccggcggc agttcaagtt cttcagcaat atcggtgttt
    45481 ttgatcgcct gcgcttcgtc gagagacttc cctttcaccc attcggtgac tagggagctg
    45541 gaagcgatag cagaaccgca gccgtaagtt ttaaaacgcg cgtcttcaat gataccttca
    45601 tcgttgactt taatctgcaa cttcatcacg tcgccacagg ccggtgcacc caccatgccg
    45661 ctgccgacgt tctcgtcgtt gttgtcaaag gaacccacgt tacgcggatt ctcgtaatgg
    45721 tcgataactt tttcgctgta agccattata aattctcctg attccgatac cgattaatga
    45781 tgagcccatt cgatgctgtt cagatccacg ccctgcttgt acatttccca cagcggagaa
    45841 aggtcacgca gacgaccgat ggatttacga actaactcga tggtgtagtc gatctcttct
    45901 tcagtagtaa aacgacctaa agagaaacgg atagagctat gtgccagctc gtcgttcagc
    45961 cccagcgcgc gcagcacgta ggacggttcg aggcttgccg acgtacaggc ggagccggaa
    46021 gaaaccgcga ggtctttcag cgccataatc agcgactcac cttcaacgta gttgaagctg
    46081 acgttgagaa tgttcggcgc accgtgttcg aggtcaccgt tcaggtaaac ttcttcgata
    46141 tctttgatgc cgttccacag acggttacgc aggccgcgca gacgttccat ctcggtcgcc
    46201 atctcttctt ttgcgatgcg ataggcttcg cccattccga cgatctggtg aacaggcaga
    46261 gtgccggaac gcataccgcg ctcgtgaccg ccgccgtgca tttgcgcttc gatgcgtaca
    46321 cgcggtttac gacgcacata cagcgcaccg atacctttcg ggccatagat tttgtgaccg
    46381 gagaaagaca tcaggtcaac tttcaactgg ctcaggtcga ttggcagttt gcccacgctc
    46441 tgggttgcat caacgtgata gataatgcca cgagcacggc acatttcgcc gatagccgcg
    46501 atatcctgca ccacgccgat ttcgttattt acgtgcatga tggaaacgag gatggtgtcg
    46561 tcacgcatcg ctgcttcaag ttctttcagg tcgataatgc cgttacgctg cggtgccagg
    46621 taagtgactt caaaaccttc gcgctccagc tgacggcagg tatccagtac cgctttgtgt
    46681 tcggttttgc tggtgatgat gtgcttgcct tttttctgat aaaagttggc tgcacctttg
    46741 atcgccaggt tgtcagattc ggttgcacca gaggtaaaga cgatttcacg cggatcagcg
    46801 ccgaccagat cggcaatctg attacgggcg atatctaccg cttcttcagc ctgccagccg
    46861 aaacagtgag aacgagaggc cgggttacca aaggttccgt ccatcgtcat gaactgcatc
    46921 attttctcgg caacacgcgg gtccaccggc gtggttgcgg agtagtcgag ataaatcggt
    46981 aatttcattg ctctataaac tccgtacatc actcaatgca aggaatcagg ctaccggctg
    47041 gatgtacgac cgtgtttacg gagtatttag cactccggcc tgattctgaa ttctttttat
    47101 taagcgcgta acttaacgtc gatcgcgtct tgtgtgcggg tgcgtggcgc gtcgtgagta
    47161 tgctgacgac cagacacatc cagcacttcc tggttattaa ccagttcgcc taaagtaatg
    47221 ttgttgagaa aaccggtgag acggtcgctc aaatcacgcc acagcgcgtg ggtcaggcat
    47281 ttatcgccgc cctggcagcc gcctttaccc tgacaacggg tggcatctac agattcgtca
    47341 acggcgctaa tcacttcgcc aacggcgatg ctgctggcat ctttgcctaa cagataacca
    47401 ccgcctggtc cacgtacgct ggaaaccaga ccatttttac gcagacggga aaacagttgt
    47461 tccagataag aaagggaaat tccctgacgt tcggaaatat cagccaacgg taccgggccc
    47521 gcttcagagt tgagcgcaac gtcaagcatt gcggtcacgg catagcgccc tttagatgtc
    47581 agtctcatgt cttacttcac ctcaaactcg cccctgcccg gggtttttta ttgtaaaagt
    47641 gggggtattg catagcaggg tcaagtctga cattcccgag taaattggtc aaatatttac
    47701 ttgactgatt tagtcgggta tttaaccttc agtgccattt ttttatcgtg gcgtttgaac
    47761 ctgttgttct tccagaccat gggcgggttg agggcaatta ttcgcattag cgctggcctg
    47821 tttccctcac cctcacccta accctctccc tctccctctc cctctccccg aaggggcgaa
    47881 gggaccgtcc gtgcacttat ctggcttagc cctcaggcct tattaccttt attctgctgc
    47941 tctatagaag ccagaatccc gcgcaggata ttcaattcct ggctttccgg gcgcgcacgg
    48001 gtaaacagac ggcgcaattt attcatcacc tgccccggat ggttttcacg gataaaaccg
    48061 gttgccagca gcgtttgttc cagatgacca taaaaacgct ccagatcatc gaccagcgga
    48121 tacggcgtct cttcatgctc gacctgctcg ccattttcct gagttgccag ccaggccatg
    48181 cgcacttcat aggcaataac ctgaaccgcc atcgccaggt tcagcgagct gtattccggg
    48241 ttagccgcaa tcgcgacatg ataatggcat ttctgcaact cttcattggt caagccgacg
    48301 cgctcgcgac caaacaccag cgccaccggg gtatttgccg cttcagcgac gcttttcagg
    48361 ccgcattcgc gcgggtcgag catcggccat ggcagcgtgc gggaacgtgc gctggtgccc
    48421 accaccaggc tacaaccggc taacgcttcg tcgagcgtat cgacgatgtg agcattacca
    48481 atcacatcgc tggcccctgc tgccagggca atcgcctggg agtcgggttt caccagtgga
    48541 ttaaccagcc acagattggt taatcccatt gttttcatag cacgggcaac agaacctata
    48601 ttgccggtgt gtgacgtctc caccagcaca attcgaatat tttgcagcat tgtctttctt
    48661 catctaaaga ttattcacgc atcttatcat aaaacgaaga cagatgccga tctcgctgct
    48721 atactctgcg ccgttttccc gttctttaac atccagtgag agagaccgat gcatccgatg
    48781 ctgaacatcg ccgtgcgcgc agcgcgcaag gcgggtaatt taattgccaa aaactatgaa
    48841 accccggacg ctgtagaagc gagccagaaa ggcagtaacg atttcgtgac caacgtagat
    48901 aaagctgccg aagcggtgat tatcgacacg attcgtaaat cttacccaca gcacaccatc
    48961 atcaccgaag aaagcggtga acttgaaggt actgatcagg atgttcaatg ggttatcgat
    49021 ccactggatg gcactaccaa ctttatcaaa cgtctgccgc acttcgcggt atctatcgcc
    49081 gttcgtatca aaggccgcac cgaagttgct gtggtatacg atcctatgcg taacgaactg
    49141 ttcaccgcca ctcgcggtca gggcgcacag ctgaacggct accgtctgcg cggcagcacc
    49201 gctcgcgatc tcgacggtac tattctggcg accggcttcc cgttcaaagc aaaacagtac
    49261 gccactacct acatcaacat cgtcggcaaa ctgttcaacg aatgtgcaga cttccgtcgt
    49321 accggttctg cggcgctgga tctggcttac gtcgctgcgg gtcgtgttga cggtttcttt
    49381 gaaatcggtc tgcgcccgtg ggacttcgct gcaggcgagc tgctggttcg tgaagcgggc
    49441 ggcatcgtca gcgacttcac cggtggtcat aactatatgc tgaccggtaa catcgttgct
    49501 ggtaacccgc gcgttgttaa agccatgctg gcgaacatgc gtgacgagtt aagcgacgct
    49561 ctgaagcgtt aatgactcag gcgggtgata tcactccccc gcctccgcct ttcaggcgct
    49621 attccgaaat acttcctcac cgctttactt tctttcgcca ctctcccacc atctttcccc
    49681 gattaatgga tgataaagaa gtcgcaagga aaggttatgg cgctgccagt gaacaaacgc
    49741 gttctcaaaa ttctgtttat tctctttgtt gttgccttct gcgtttattt agtgccgcgc
    49801 gttgccatca acttcttcta ttatcctgac gataaaattt acggtcccga cccatggtcg
    49861 gcggaatccg tcgaatttac ggctaaggac ggtactcgtc tgcaaggctg gtttatccct
    49921 tcttcgacgg gccctgctga caacgccatc gcaaccatca ttcatgctca cggcaatgcc
    49981 ggaaatatgt ccgcccactg gccgctggtc agttggttac ccgagcgtaa tttcaacgtt
    50041 tttatgtttg attatcgcgg gtttggtaaa tcaaaaggca cgccgtccca ggccggattg
    50101 ctggacgata cgcaaagcgc catcaatgtg gtgcgccatc gcagtgatgt aaacccacaa
    50161 cggctggtgc tgttcgggca gagtattggc ggggcgaata ttctggatgt tattggtcag
    50221 ggtgatcgtg aaggcatacg tgcggtgatc ctcgactcca catttgcctc ttatgcgacc
    50281 atcgccaacc agatgatccc cggcagtggc tacttacttg atgagcgtta cagcggcgaa
    50341 aattacatcg ccagcgtcag cccgatcccg cttttactca ttcacggtaa agccgatcac
    50401 gttatcccat ggcagcacag cgaaaagttg tatagcctgg caaaagagcc aaaacggttg
    50461 atcctaatcc cggatggcga acacattgat gctttttccg atcgtcacgg caatgtttat
    50521 cgcgaacaga tggtggactt tatccttagc gcgttgaatc cgcagaacta acccatgatc
    50581 gctagcacga taatcattca caaaaccacc ttaagacatg ctaatccact ggtcagaaca
    50641 gtttaagatg agaaaaattc tgtgacgctt gccaacattt ctgatgatta gcattccctt
    50701 cgccatttcc ctgagcaaac tttagctatt cttatcaatt atgcttatgg gagatctaca
    50761 gatgatgcct acgcttgctc caccatctgt cctttcggct ccccagcgcc gctgccagat
    50821 cttgctgacg ctctttcagc cggggttgac cgccaccatg gcaaccttca gcgagcttaa
    50881 tggtgtggat gatgatattg ccagtcttga tatcagcgaa acaggacggg agatcctgcg
    50941 ctatcatcaa ctcacactga cgactggtta tgacggtagc taccgggttg aaggtacagt
    51001 gcttaaccaa cgtttgtgtt tatttcactg gctacgacgt ggtttccgtc tgtgtccgtc
    51061 atttattacc agccaattca cccccgccct gaagagtgaa ctgaagcggc gcggaattgc
    51121 acgtaacttt tacgacgata ccaatctaca agcgttagtg aatctctgct cccgacggct
    51181 gcaaaaacgc tttgaatcgc gcgatattca tttcctgtgt ctgtatctgc aatattgttt
    51241 gctgcagcac cacgctggaa ttacgcctca gtttaatccg ctccaacgtc gctgggcgga
    51301 atcctgcctt gaatttcagg tagcgcagga aattggacgc cactggcagc gtcgggcgct
    51361 ccagcctgta ccgcctgatg agccactgtt tatggcatta cttttttcca tgttgcgggt
    51421 tcccgatcca ctgcgggatg cgcatcagcg ggacaaacaa ttgcgtcagt ctatcaaacg
    51481 tctggtaaac cattttcgtg agctgggaaa tgttcgtttt tatgatgaac aggggttatg
    51541 tgatcagctt tatacccacc tcgcccaggc gttaaatcgc agtttgtttg ccatcggtat
    51601 tgataatacc ctgccggaag agttcgccag actgtatcca cgcctggtac gcaccacccg
    51661 cgcggcgctg gccggatttg aaagtgaata cggcgtccat ctttctgatg aggaaagtgg
    51721 tctggtcgcg gtgattttcg gtgcctggct aatgcaggaa aacgatctgc atgaaaaaca
    51781 gattattcta ctgaccggga atgatagcga gcgagaagcg cagattgagc agcagttacg
    51841 cgaactaacg ttactgccgc tcaacattaa gcatatgtcg gtaaaggcat ttttgcagac
    51901 aggcgctccg cgtggcgcgg cactgattat tgcgccttat accatgccat taccgctctt
    51961 ttcaccaccg ctgatctata cagacctgac gctgacaaca catcaacagg agcagatccg
    52021 caaaatgctc gaatcagcat gagggaacaa ctttcgggcg caaaaacatt gccggaagcg
    52081 ccaccagcgc cattacccag aacacgccgt ggcccagata ttgatacagg aaaccggcga
    52141 aaacggtcat gatagcgata ctgccgccca tcgcgacggc agagtaaacc gcctgtaaac
    52201 ggatgacttc gctaccctgg cgagcagcaa tataacgcat ggcggccagg tggcagaccg
    52261 tgaaggtgcc gcaatgcaga atttgcacca ctatcaacca cggcaacgcc gtagttgctc
    52321 ccataatgcc ccagcgcact acgccgcaaa tcgccgagat caacagcata tcgcgagcac
    52381 tacaacggcg gaaaagttta ttactcagcg caaagataat gacttccgcc accacgccca
    52441 gcgaccacaa aaaccccacc gccgaggccg agtagccagc tgcctgccag taaatggcgc
    52501 taaaaccgta ataggccgca tgtgccccct gcaataaaca aacgcaggcc agaaagcgcc
    52561 agttctggcg aaccagcgcc aaccacgcag accaaccggt gctctcctgc tggcggcttg
    52621 ccccttgtgg ctgaatcgtc ggacggatga gaaaaccgag cagcatggat gccacgccca
    52681 acgtcaacag cacgaggatc acccgataat caaacatagt gaccagtttg cccgtcagcg
    52741 ccgagccaat gacaaacgcc accgagcccc acagtcgcac tttgccgtaa tcaagcggga
    52801 actgcttttg ccacgtattc gccagtgcat cggtcaacgg taccagcggt gagaaaaaga
    52861 ggttaaagcc aatcatcacc agcatcagcc acgctacgtg cgcccccgcc cagaaggcga
    52921 cagcaaagag aagtgtcagc agtgccagca cgcgcaaggc ggaaatcagg cgggaaggat
    52981 cgctgacgcg gggcgcgatg agcaaactcc cgagaaaacg ggcaaccaga cctgccccca
    53041 ataacaggcc gatggtttct ggcgttaaac caatcccttt aagccagacg ctccagaaag
    53101 gtaaaaaaat gccgtaacta aaaaagtatg tgaaatagcc gagcgccaac cagcgcgtgg
    53161 attgcaaaac catgagtccc tcccgtcaga aggcgttagt ctggggttaa tcgaatgttg
    53221 gtgcaagttg aaaaataaga atattcgagc ctgcttcccg atgtctgtaa cgccagttca
    53281 caagcactaa aaaactgcga tccgcgacgc atgttgcaaa aataatgcgt aattatgccg
    53341 ttacgcttgc caaacgttcc tgcacaatgg cgatgaaatc gcgtaatgcc ggcttcatct
    53401 cccctttctt ccacgccatc agtaaagcaa tggaaggcac atttccggca atgggacgaa
    53461 aaacaacctg cccggtatta aaattattca tataaccggg tatcaaagtg acgcccagcc
    53521 ccatgcccac cagattcatg gtcaccagaa tattcgttgc cacctggacg atatttggct
    53581 ggctgttttc ttgcgcaaac cacgctttaa cgatcggcgc aagcgaaccg gaatacgccg
    53641 gatcggtact gacgaaattc acgccatcca gttgcgcggc ggtgatctct ttttcatgtg
    53701 ctaaagggtg atcaaccggt aacaccacca ctaatggttc gtcaaaaagc tccagataat
    53761 caatctccgg gctataaaca ggatggcgca ttaagccgac gtcgagttca ccacggcgaa
    53821 ttttttcctc ctgttgcgtg gtgattaaac tcaccagctc aatcaaggtg tctggctgtc
    53881 tgagacgaaa catcggtaat acttttggca ataaattcac ttccgccgat ggcacaaagc
    53941 caatggttaa ttgtctgtct tcctgaacaa ttttccgcgc ccgtaatttg gcattttccg
    54001 cttgttcgag gattgccagc gcgtcctgga gaaaacattc tcccgccgcc gtcaacgcga
    54061 ctttgcgctt atccctcacc agtaacggaa caccgacaca gttttcaaga tcgcggatct
    54121 ggctgcttaa cgaaggctgt gaggtatgca gtttttccgc cgcacgggta aagttcagtg
    54181 cctgcgccac tgcgacgaaa tagcgtaaat gccgtagttc catcaccttc cccttgttat
    54241 cgaaaaaacg tctcaactgg tagaaattaa ctatttcaca tattagcaac caaccagcaa
    54301 catccttatg gcacaaaaat agaaggtcaa tacatcttat ctttcaggat taaaaaatat
    54361 gaccacaccc tcagatttga acatttacca actgattgac acccaaaacg gtcgggtcac
    54421 tccgcgtatt tataccgacc cagatattta ccaactggag cttgaacgta ttttcggccg
    54481 ttgctggtta tttctcgccc acgaaagcca gatcccaaaa cccggtgatt tctttaacac
    54541 ctacatggga gaagatgcag ttgtcgtggt gcgccagaaa gacggcagca tcaaggcgtt
    54601 tctcaaccaa tgccgccacc gggccatgcg tgtgagttat gcagattgcg gcaacactcg
    54661 cgcctttacc tgcccgtatc acggctggtc ttatggcatt aacggcgagt tgatcgatgt
    54721 accgctggaa cctcgcgcct acccacaagg gttgtgtaaa tcccactggg ggctaaacga
    54781 agttccttgt gtggagagtt ataaagggct gatttttggc aactgggata ccagcgcacc
    54841 gggcctgcgt gattacctgg gtgacattgc ctggtatctg gatggcatgc tggatcgtcg
    54901 cgaaagcggc accgaaattg tcggcggcgt acaaaagtgg gtgatcaact gcaactggaa
    54961 attcccggca gagcagttcg ccagtgacca gtatcatgct ctgttcagcc atgcttctgc
    55021 cgttcaggta ttaggggcga aagatgatgg cagcgataag cgcctcggtg atggacaaac
    55081 cgcccgcccg gtgtgggaaa ccgccaaaga tgcgctgcaa tttggtcagg acggtcacgg
    55141 tagcggtttc ttctttactg aaaaaccgga tgctaatgtc tgggtcgatg gcgcagtttc
    55201 aagctattac cgcgaaacct atgccgaagc agaacaacgt ttaggtgaag ttcgcgccct
    55261 gcgcctggcg ggtcataaca atatattccc cacgctttca tggctaaacg gcactgccac
    55321 actccgcgtc tggcatccgc gcggccctga tcaagttgaa gtgtgggcgt tctgtattac
    55381 tgacaaagcc gcctccgatg aagttaaagc cgcttttgaa aacagcgcca ctcgtgcttt
    55441 tggtcctgct ggttttctcg agcaggatga ctcggagaac tggtgtgaaa tccagaaatt
    55501 gcttaaaggc caccgcgccc gcaacagcaa actgtgtctg gaaatggggc ttggtcagga
    55561 aaagcgccgc gacgacggca ttcctggcat tactaactat atcttttcag aaactgccgc
    55621 tcgtggaatg taccaacgct gggccgatct tctgagtagc gaaagctggc aggaagtgct
    55681 cgataaaacc gccgcttacc agcaggaggt gatgaaatga gtgcgcaagt ttcactggag
    55741 ttacatcacc gcattagcct gtttctcttt cacgaagcca gtctgctgga tgactggaaa
    55801 tttcgtgact ggctggcaca gctcgacgaa gagattcgtt acaccatgcg caccacggtt
    55861 aacgcgcaaa cacgcgaccg tcgcaaaggc gtccagccgc cgacgacctg gattttcaat
    55921 gacaccaaag accagctgga gcggcgaatc gcccgtctgg aaacgggcat ggcctgggca
    55981 gaagagccgc cgtcacgcac tcgtcactta atcagcaact gccaggtaag cgaaaccgac
    56041 atcccaaacg tatttgccgt gagggtgaat tatctacttt atcgggcaca aaaagagcgc
    56101 gatgaaacat tctatgttgg aacgcgtttc gacaaagttc gccgtctgga agatgacaac
    56161 tggcgcttgc tggaacggga tatcgtcctg gatcaagcgg tgatcacttc ccataacctg
    56221 agtgtactgt tctgatgaat cgaatttatg catgtcccgt tgcggatgtg ccggagggtg
    56281 aggctctccg gatagatacc tcgcccgtca tcgccttgtt caacgtgggc ggcgagtttt
    56341 atgccattaa cgatcgttgc agccatggta atgcgtcgat gtcagaaggg tatctggaag
    56401 atgacgccac ggtggagtgc ccgctacacg ccgccagttt ttgcctgaaa acggggaaag
    56461 cgttatgcct gcccgccacc gatccgctca ccacttatcc agtacacgtt gaaggtggtg
    56521 acattttcat cgacttaccg gaggcgcagc catgagcgat ctgcataacg agtccatttt
    56581 tattaccggc ggcggatcgg gattagggct ggcgctggtc gagcgattta tcgaagaagg
    56641 cgcgcaggtt gccacgctgg aactgtcagc ggcaaaagtc gccagtctgc gtcagcgatt
    56701 tggcgaacat attctggcgg tggaaggtaa cgtgacctgt tatgccgatt atcaacgcgc
    56761 ggtcgatcag atcctgactc gttccggcaa gctggattgt tttatcggca atgcaggcat
    56821 ctgggatcac aatgcctcac tggttaatac tcccgcagag acgctcgaaa ccggcttcca
    56881 cgagctgttt aacgtcaacg tactcggtta cctgctgggc gcaaaagcct gcgctccggc
    56941 gttaatcgcc agtgaaggca gcatgatttt cacactgtca aatgccgcct ggtatcctgg
    57001 cggcggtggc ccgctctaca ccgccagtaa acatgccgca accggactta ttcgccaact
    57061 ggcttatgaa ctggcaccga aagtgcgggt gaatggcgtc ggcccgtgtg gtatggccag
    57121 cgacctgcgc ggcccacagg cgctcgggca aagtgaaacc tcgataatgc agtctctgac
    57181 gccggagaaa attgccgcca ttttaccgct gcaatttttc ccgcaaccgg cggattttac
    57241 ggggccgtat gtgatgttgg catcgcggcg caataatcgc gcattaagcg gtgtgatgat
    57301 caacgctgat gcgggtttag cgattcgcgg cattcgccac gtagcggctg ggctggatct
    57361 ttaaggaagc acgatgaaag aaaaaacgat cattattgtc ggtggcgggc aagcggcggc
    57421 aatggctgcg gcctcactac gccagcaagg gttcaccggt gagctgcatc tgttttccga
    57481 tgagcaacat cttccttatg aacgcccccc gctctcgaaa tccatgttgc tgcaagattc
    57541 cccacagttg cagtctgtgt tacccgctca ctggtggcag gaaaacaatg ttcatctgca
    57601 ttccggtgta accatcaaaa cattgggccg cgacacacga gagttagtgt tagccaacgg
    57661 cgaaagctgg cactgggatc agctttttat agcaaccggc gcggcagctc gaccgctgcc
    57721 gttgcttgat gcactgggag aacgctgctt taccctgcgc catgccggtg atgccgccag
    57781 actgcgagaa gttctgcagc ccgaacggtc agtcgtgatt gtcggtgccg gaactattgg
    57841 tctggaactg gctgccagcg ccacgcagcg cagatgtaag gtgacagtga ttgaactggc
    57901 ggcaaccatc atgggccgta atgcaccacc gcccgtgcaa cgctatcttt tacagcacca
    57961 tcagcaggct ggtgtgcgca ttctgctcaa taatgccatt gaacatgtgg tcgatggtga
    58021 aaaagtagaa ctgacgctgc aaagtggcga aacgcttcag gccgatgtgg tgatttacgg
    58081 tattggtatc agcgccaacg accaactggc tcgcgaagcc aaccttgata ctgccaatgg
    58141 cattgtcatt gatgaggctt gccgcacctg cgatcccgcg atctttgcct gtggcgatgt
    58201 ggcaatcacc cgtcttgata atggcgcact acaccgctgc gaaagctggg aaaacgccaa
    58261 taaccaggcg caaattgccg ctgccacaat gttagggcta ccgcttccgc tactgccgcc
    58321 gccgtggttc tggagcgatc agtacagtga taacttacag tttattggcg atatgcgtgg
    58381 cgatgactgg ctttgtcgtg gcaacccgga aactcagaag gcgatttggt ttaatctgca
    58441 aaacggcgtg cttatcggtg cggtcacgct gaatcagggg cgtgagattc gcccaattcg
    58501 caaatggatc cagagcggca aaacgtttga tgcgaaactg ctgatagatg agaacatcgc
    58561 gcttaaatca ctgtaaccag gataattagc gaatatctca atgcctgggg cgtggcgagg
    58621 tgcaagagtg tgtattacgt ttaaatcaca ttatcttgca aagggattgg ttatgaacac
    58681 actacgttat tttgattttg gagctgcccg ccccgttttg ttattaattg cccgtatcgc
    58741 cgtggtctta attttcatta tttttggttt tcccaaaatg atgggctttg acggtacggt
    58801 ccaatatatg gcctcgttgg gcgcgccaat gccgatgctg gcagcgatta ttgcggtagt
    58861 tatggaagtg cccgccgcga tattaatcgt gcttggcttt ttcacccgtc cgctggcggt
    58921 gctgtttatt ttctacacgc tgggtacggc ggtgattggt caccattact gggatatgac
    58981 cggcgatgcg gttgggccaa atatgattaa tttctggaag aatgtcagta tcgctggcgc
    59041 gttcttgcta ttggcaatta ccgggccggg ggcaatttct ctcgatcggc gttaggaaag
    59101 atgccggatg cggcgtgaac gccttatccg gcatttaata aattacagca acgcaacccg
    59161 caacgacatc tctgaagttg ttgattcccc aggtgcaagc gcaatgaggt caccaccttc
    59221 cgggcgatga tggtcatcag gcgcatggct catcggttcc agacagaaga aatcaaacgc
    59281 atatccttta tcaaacgcag ggtcagaaac aaagatgaaa taacacggtg caggtggcgt
    59341 cgtttccatg atgatggcat aaccttcctg cggctgctcg atgcgggcct gaccattcca
    59401 tccggcaaaa ccattgttca cccactggcg cggcaacggc gcgagctggt taaaatccag
    59461 ttcctgcggt agctgctcac aaaactcacc cgccagccac tgctcccgtt ccagccagta
    59521 accgctcgcc tgcgcctgaa tccgcgtttg tggtgacaac ggaaaataag gatgccagcc
    59581 ggtaccaaat ggcagcgtct ctgccccttg attggtgaca gagagcgtca ccgtcagcgt
    59641 atctgccgtt aaatgaaacg tctggcttac ccgatagtga taaacaccgc tgcgatgttc
    59701 atacaccaga cacaagctat catcattgcg cgagacacat tgccactgcc ccagccagcc
    59761 gtcgccgtgc agataatgcg catcccattc aacattcggt tgcagttgat actcacgccc
    59821 ctgccagaca aaacgattgc cgctcacccg gtttgcaaac ggcaccagcg gaaaacagga
    59881 ggcatcggtt gccacaccgt tttttttacc aggacgtaag agcggcgtcg tatcacgcca
    59941 gaagccttcg attacgccgc cctggtcaga aacgtccagc tttagcggtc cgtgagataa
    60001 ggtatagatg gtcatccgct aactccttaa tccgggaagt taatcacaac tttcccgcat
    60061 ttgccgctcg ccatcagcgc ataggcatca cctgcctgtt ccagcgtgaa gcgatgggta
    60121 atggcgttac gcggccacag tttccagtcc gtcagatcat gggcgcattt ttccatatgg
    60181 aacagactgg tcacccagga gccgataatc cgccgttgat ggtgcatcag atcggcgctg
    60241 acctcgaact ccacttttcc ggtttcacca atgtaaacca cccgtcccca gtcagcggtg
    60301 gattgcagtg ccagcaagcg acctgcggca ttaccagaac aatcgagcgc aacatccgcg
    60361 ccaccgtggg taagttcagc aattatctgc ggcagacctt cggtggtcgc taaatagccg
    60421 tgatccatca cccctaactg ttttgccatc gccagacgtt ccggcagcat atcaacgccg
    60481 atgatccgtt ttgcaccgcg acctttcgcc agcatcatcg ccatcatgcc gaccggcccc
    60541 agaccgacca ccagcacgtt atcgctgccg gaaacttcgc cgcgcaaaat cccttcatag
    60601 gccgtgccaa cgccgcaact gataaacgca ccatcttcgt agctcagcgc atccggcagg
    60661 aggatcagat ctttttcttc cgccagcaga tattcggcat gaccgccgtc acgctgccag
    60721 ccgtaagccg cttttccttt gccagtacaa gagataggaa agccgcggcg gcagttcggg
    60781 caaaaaccac agccagaaat gtgatacacc agcacgcgat caccctcttt aaaatggcga
    60841 cagccttgcc ccatcgccac aatttgcccg cacggctcat gaccgttgat aaagccctgg
    60901 tataacggtt tatcgggcgc cgccgccgtg gcgcggtgtt gatggtagat atagtggaca
    60961 tcgcttccgc aaatcccgga ggatttcatt ttgatcagta cctggttaat ccccggcgtc
    61021 ggcaccgcaa cttcccgcag atcgacggtc gaatttcctg gtaaataagc tgccagcatc
    61081 gttttcataa atccctcatt aacaatacga ttaattttca tccctgccgc acccgcgcca
    61141 ggggcgttaa ggtttagcgt ttcgctttac tgctacgctg ggtcagcaag atattcgcca
    61201 gcaccgccac cacgatgatg acgccgcgca ccacctgctg gaaaaaggag ttaatcccga
    61261 gcagcaccag accgttacct attagcgtaa tcaccagtac gccaagcagc gtaccgaaca
    61321 acgagccgcg accaccggaa agcgccgtac cgccaaccac gactgcggcg atgacgtcaa
    61381 actccagacc gtttgcggca cctgcgttac cagaaccgag gcgcgccgcc aacaaaatgc
    61441 cggtcaccgc cgctaataat cccgaaaggg taaagataag aatgcgtacc cgacgaacgt
    61501 taataccgca caactgcgcc gccgtagcat taccgccaac ggcaaaaacc gagcgcccga
    61561 agacggtttt gcggctgatg aacacaaaca gcgcaaacaa caccatcatg atcagcgcgg
    61621 atactggcac acctagaaat tgtccgccca gccagtccag cacctcgttt tcgtcaatcg
    61681 gcactggcag ggcgttggtc ataaacaagc ccattccgcg cagggcgctc cacagcccca
    61741 gcgtggcaac gaaacttggc acgttaaaca cgccacgcag caccccggcg agcgttccca
    61801 tcagcgcgcc taacagcaac accattagac acgccaccgc cagcggaact tcaaattgca
    61861 gcaaaaatgc caggcacacc gagacaaaag ccaccatcgg cccaacgctg acatcaattt
    61921 caccggagat aataatcagc gtcatcgccc aagcagcgat cccaatggtg gcggcatcgc
    61981 gcagcacgtt catctggtta ttcaatgaga taaagccagg cgcgttcagg gagaagacca
    62041 gataaagaat ggcaatcacc accagcaaac cgatctcatt aatatggcga ctgacaaatt
    62101 gtttgagcga gacgctcttg ccctgcggca atggtaatga cgaagcagac atcttcaggt
    62161 tcctcggtaa aattcatcag tgcacagaca gaatggcgga catcagctca tccacattga
    62221 ccggagcgtg aaactcctgc gagaacgtgc cgtgctgtaa taacaggatg cggtcacaca
    62281 ccagcggcaa ctcctccact tcactggaga taaacaccac gctttttcct tcggcagcca
    62341 gctcacggac aatacggtaa atctgctgtt tggcttcgat atcgacgccg cgcgttggct
    62401 cgtcgagcaa caaaatctgg ctggcggcat agacccaacg accgatcact actttttgct
    62461 gattgccgcc agaaagcgtg ccgatgggcg tttcgctact ggcggccttg accgtcatcc
    62521 gctgcatcac ctcttcggtc aggcggcgga tggtggacca ttgcagcact ccgttggcgc
    62581 tgattttttg ccgattggtc agcactgtat tttcgtcaac gcccagccag ggaatgatcc
    62641 ccgcttcttt gcggttttct ggcgtatagc caatgccgcg tttcagcatg tcgccgtaat
    62701 cggggcgcgt gattttctcg ccgttgataa ctatttcgcc ctgttcatac tcctccagcc
    62761 caacaatcgc cttcagcaat tcactgcgcc ctgcccccag caggccagca atgccaagca
    62821 cttcgccgcg acgtaacgta aagctgatat cctccagctt gggcttatgg cgtaacgcac
    62881 ggacttccag cacggcctga tccacaattt cctgaggggc taccggcgca atatcaacgt
    62941 gatcac
//
LOCUS       DAJVTL010000004        60456 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.004, whole genome shotgun sequence.
ACCESSION   DAJVTL010000004 DAJVTL010000000
VERSION     DAJVTL010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 60456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60456
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.004"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(13..510)
                     /gene="rrrD"
                     /locus_tag="OQQ26_000209"
     CDS             complement(13..510)
                     /gene="rrrD"
                     /locus_tag="OQQ26_000209"
                     /EC_number="3.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme RrrD"
                     /protein_id="HCS1855828.1"
                     /translation="MSPSLRKAVAVAIGGGAVAIASVLITGPGGNDGLEGVSYIPYKD
                     IIGVWTVCHGHTGKDIMPGKTYTEAECKALLNKDLATVARQINPYIKVDIPETTRGAL
                     YSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVC
                     LWGQQ"
     gene            complement(510..725)
                     /locus_tag="OQQ26_000210"
     CDS             complement(510..725)
                     /locus_tag="OQQ26_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II holin family protein"
                     /protein_id="HCS1855829.1"
                     /translation="MYQMEKISTGIAYGTSAGSAGYWFLQWLDQVSPSQWAAIGVLGS
                     LLLGLLTYLTNLYFKIREDKRKAARGE"
     gene            complement(1405..1479)
                     /locus_tag="OQQ26_000211"
     tRNA            complement(1405..1479)
                     /locus_tag="OQQ26_000211"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1444..1446),aa:Gly,seq:tcc)
     gene            complement(1483..1558)
                     /locus_tag="OQQ26_000212"
     tRNA            complement(1483..1558)
                     /locus_tag="OQQ26_000212"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1523..1525),aa:Thr,seq:tgt)
     gene            complement(1561..1637)
                     /locus_tag="OQQ26_000213"
     tRNA            complement(1561..1637)
                     /locus_tag="OQQ26_000213"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1601..1603),aa:Arg,seq:tct)
     gene            complement(1639..1715)
                     /locus_tag="OQQ26_000214"
     tRNA            complement(1639..1715)
                     /locus_tag="OQQ26_000214"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1679..1681),aa:Ile,seq:cat)
     gene            complement(1905..2459)
                     /locus_tag="OQQ26_000215"
     CDS             complement(1905..2459)
                     /locus_tag="OQQ26_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1133 family protein"
                     /protein_id="HCS1855830.1"
                     /translation="MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGGGKTGN
                     MFNLMLTSKKLTKTAINEALRRMKKAGLNKSELEAFLRDMINGKQKSWLAHCTDAEAL
                     CIDRVISEVLAEHPGLISVLRQRYEGRGMTKRKMAELLNDAHPKWSLRTCERRIEHWL
                     KVAEFILYKPIVMAFGIEKKVIAF"
     gene            complement(2456..2746)
                     /locus_tag="OQQ26_000216"
     CDS             complement(2456..2746)
                     /locus_tag="OQQ26_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HCS1855831.1"
                     /translation="MVDLLKAARGQMCTVRIPGYCNHDPETSVLAHYRLAGTCGTAIK
                     PHDMQAAIACSSCHDLIDGRVKTSDYTKEELRLMHAEGVFRTQEIWRKEGYL"
     gene            complement(2746..3345)
                     /locus_tag="OQQ26_000217"
     CDS             complement(2746..3345)
                     /locus_tag="OQQ26_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HCS1855832.1"
                     /translation="MAHIQLVKQTSSGLLLPATPESCDFLHQIKIGEWIHADFKRVRN
                     YAFHKRFFKLLQLGFDYWTPVGGAITPRERKLVSGFVDYLCELVGREHTPALSEAAEQ
                     YLNTVATRRTRDTALLKSFEAFREWVAIQAGFYTEHFYPDGSRGCRAKSIAFANMDET
                     EFQQVYKSVLNVLWNWILFRKFSSPEQVENVAAQLLEFA"
     gene            complement(3384..3671)
                     /locus_tag="OQQ26_000218"
     CDS             complement(3384..3671)
                     /locus_tag="OQQ26_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855833.1"
                     /translation="MKIEELREIFSENGLYAVRVENGAIVSHCRIRCLQSQQRKSGAV
                     LFYFCNGLLTDGFILREDEFVTSLRVLKEIGFKAGFLLLLKNKLIYNLEQD"
     gene            complement(3921..4076)
                     /gene="hokD"
                     /locus_tag="OQQ26_000219"
     CDS             complement(3921..4076)
                     /gene="hokD"
                     /locus_tag="OQQ26_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokD"
                     /protein_id="HCS1855834.1"
                     /translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF
                     VDYESRK"
     gene            complement(4304..4969)
                     /locus_tag="OQQ26_000220"
     CDS             complement(4304..4969)
                     /locus_tag="OQQ26_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HCS1855835.1"
                     /translation="MTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDY
                     TIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGI
                     RCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYPGMVYWD
                     YNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKE
                     EKE"
     gene            complement(5138..5494)
                     /locus_tag="OQQ26_000221"
     CDS             complement(5138..5494)
                     /locus_tag="OQQ26_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001514295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855836.1"
                     /translation="MEINPEDELSNIVLFPIKEDGPRNQVNFLYEPSERPYCHHASVR
                     VDEKERQVRCKICGAVVEPFDWMLSVAKRETRLADDVRLLRQEEQERRRNIEKLIQIE
                     RNAKARIRRATKSRTE"
     gene            complement(5552..5974)
                     /locus_tag="OQQ26_000222"
     CDS             complement(5552..5974)
                     /locus_tag="OQQ26_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HCS1855837.1"
                     /translation="MAKPFTPEQREELKTRIVELVHQDGRVTIRQLSDETGISRASVG
                     RLCIELVASGDVYNSGYGLFPSEQARKDWQSARKKLSRVKVRKPVVVDPDLIWSLPDG
                     EIRRYDRRLNIICRECRKSEAMQRVLAFYQGNFQEAIL"
     gene            complement(5989..6735)
                     /locus_tag="OQQ26_000223"
     CDS             complement(5989..6735)
                     /locus_tag="OQQ26_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCS1855838.1"
                     /translation="MKNIATGGVLERIRRLTPPHVTAPFRTVAEWREWQLAEGQKRSE
                     EINRLNRQLRVEKILNRSGIQPLHRKCSFANYQVQNDGQRYALSQAKSIADELMTGCT
                     NFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRE
                     LCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEVMKTLLGERV
                     MDRMVMNGGRWVNFNWESWRPNVSHSRVVK"
     gene            complement(6742..7526)
                     /locus_tag="OQQ26_000224"
                     /pseudo
     CDS             complement(6742..7526)
                     /locus_tag="OQQ26_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309971.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7604..8026)
                     /locus_tag="OQQ26_000225"
     CDS             complement(7604..8026)
                     /locus_tag="OQQ26_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855839.1"
                     /translation="MKIRHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELSLVP
                     GKDWNNQQNIYHRWLKGETKAQREKIQKLIPAVLAILPRELRHRLCIFDTLERRALLA
                     AQEALSTAIDAHDDAVQAVYRKAHFSGGGSPGDSVVVH"
     gene            complement(8010..8237)
                     /locus_tag="OQQ26_000226"
     CDS             complement(8010..8237)
                     /locus_tag="OQQ26_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1855840.1"
                     /translation="MLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQE
                     ASGGELQYDPKVYDEYRKAKRPGKVIHENQA"
     gene            8314..8721
                     /locus_tag="OQQ26_000227"
     CDS             8314..8721
                     /locus_tag="OQQ26_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1855841.1"
                     /translation="MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQ
                     PAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALPES
                     EQKALLSEMRARVENFNKLFEELLKARKRSANK"
     gene            8924..9079
                     /locus_tag="OQQ26_000228"
     CDS             8924..9079
                     /locus_tag="OQQ26_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706802.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 family protein"
                     /protein_id="HCS1855842.1"
                     /translation="MNTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTEAGARRW
                     LGRHSGE"
     gene            9081..9284
                     /locus_tag="OQQ26_000229"
     CDS             9081..9284
                     /locus_tag="OQQ26_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001005966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855843.1"
                     /translation="MNETELKHVIALLPEDAKRLQQLEPNAGTGARIWLAKEALESGD
                     YDSEEAFYKAEGRAGYSPGLGGV"
     gene            9953..10795
                     /locus_tag="OQQ26_000230"
     CDS             9953..10795
                     /locus_tag="OQQ26_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCS1855844.1"
                     /translation="MLNVAIENQNGWNYSAPAPHKTGAGIATPKSFTAHNRAQAVFLC
                     VMHSHIQIMVGRAGQSQDWPGSVMTGCSNPVRLTTHEIATSGGELIKFIAEAAIMATT
                     LSHPCVTVENGRAVTTSVAVAEFFHKRHDNVLRAIANIECSDKFTALNFEASEYTDST
                     GRKLPMYQITKNGFVFLVMGFTGKKAAAFKEAYIAEFDRMEAELRQNNTPPADKMIPG
                     DGRTLVVHFDKFGNVEFTETVPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQL
                     LSLK"
     gene            10812..11093
                     /locus_tag="OQQ26_000231"
     CDS             10812..11093
                     /locus_tag="OQQ26_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855845.1"
                     /translation="MNPMLDYCFTSAPQQTITHTGIKKLLWIIKKNLQQKGDPDLIPC
                     AYGLCDRQVSPDKAYTAELIYMHGTMMRKKKRKYCSEICAEKDQMAHEL"
     gene            11168..11442
                     /locus_tag="OQQ26_000232"
                     /pseudo
     CDS             11168..11442
                     /locus_tag="OQQ26_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415867.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11542..13500
                     /locus_tag="OQQ26_000233"
                     /pseudo
     CDS             11542..13500
                     /locus_tag="OQQ26_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000105095.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease"
     gene            13478..13774
                     /locus_tag="OQQ26_000234"
     CDS             13478..13774
                     /locus_tag="OQQ26_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001277359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor protein Gam"
                     /protein_id="HCS1855846.1"
                     /translation="MSAYPIFDRIEEMAWARHYQQIVREEKETELADDLEKGLPQHLF
                     ESLCIDHLQRHGANKQAISHAFDDDVEFQERMAEHIRYMAETIAHHQVDIDLED"
     gene            13780..14877
                     /locus_tag="OQQ26_000235"
     CDS             13780..14877
                     /locus_tag="OQQ26_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCS1855847.1"
                     /translation="MALFQRAINTQAYLKAGIMGFAGDGKTYTASELAIGLVMLMRQR
                     GIEAGNRPVMFLDTETGSDWVKPRFDAENIELFTAKTRSFVDLLEAINEAESSGSVMI
                     IDSISHFWTGLCDEYARRRNRKRGLEFSDWAWLKQEWRRFTDRFVNSQAHIIMCGRAG
                     YEYDFFEGDDGKRQLAKTGIKMKAETETGYEPSILIQMEKQMNIETGQVWRTARILKD
                     RSTRIDGQVFSNPTFKNFLPHIEFLNLGGEHLGIDTSRDNSELFANDGTPTWLKEKRA
                     KEITLDEIIELLNKHHGGTSNDAKRAKADLLEKTFTSRSWERIKGMDWPTIKAGRNAL
                     WIELEGVEYAFPDPQTQNETQQAGYDENIPV"
     gene            14928..15116
                     /locus_tag="OQQ26_000236"
     CDS             14928..15116
                     /locus_tag="OQQ26_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1187 family protein"
                     /protein_id="HCS1855848.1"
                     /translation="MYKITATIEKEGGSPTSWTRYSKSKLTKSECEKMLSGKKEAGVS
                     REQKVKLINFNCEKLLSS"
     gene            15221..16456
                     /locus_tag="OQQ26_000237"
     CDS             15221..16456
                     /locus_tag="OQQ26_000237"
                     /inference="COORDINATES: protein motif:HMM:NF019442.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000820618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase Arm DNA-binding
                     domain-containing protein"
                     /protein_id="HCS1855849.1"
                     /translation="MYLTLKEWNARQLRPRSPETVRRWVRECKIFPPPIKDGREYLFH
                     ESAKKLHLKRLAGFCRESEMTGRRRNSNTRDLPPNLYNRGGYYSYRDPRSGREFGIGR
                     DKRIAVNEAIAANMELLSTQHISLLDRIKGNSVTLFYELILNFRNEIERRQLSTNTMK
                     RHNQRLKIISEYFGGVPVKNIGIREVYSFLEIRAVGSKFAIANQYRALLSDIFKTAIA
                     SGLAEEDPASATRPFRTEVKRSRLLIDEYLLIRKIADVQNEWFGLCMDLALVTGQREG
                     DLAAMRWEDIRDGRLYVEQQKTGAKIRISLPTTISRLNLTLADVLDNLKKINGKNEKL
                     LGGKTARTIAAQFRIARDTSGLKWEGDPPPFHEIRSLSGRLHSAEKGSDFTQALLGHR
                     SSSMTDKYRDGRGREWKDI"
     gene            16692..17510
                     /gene="ybhA"
                     /locus_tag="OQQ26_000238"
     CDS             16692..17510
                     /gene="ybhA"
                     /locus_tag="OQQ26_000238"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyridoxal
                     phosphate/fructose-1,6-bisphosphate phosphatase"
                     /protein_id="HCS1855850.1"
                     /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG
                     RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHI
                     HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
                     THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV
                     VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
     gene            complement(17511..18569)
                     /gene="modC"
                     /locus_tag="OQQ26_000239"
     CDS             complement(17511..18569)
                     /gene="modC"
                     /locus_tag="OQQ26_000239"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HCS1855851.1"
                     /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
                     SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMS
                     KSMVDQFDKLVALLGIEPLLERLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
                     SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA
                     IKPGLWLYAQIKSVSITA"
     gene            complement(18572..19261)
                     /gene="modB"
                     /locus_tag="OQQ26_000240"
     CDS             complement(18572..19261)
                     /gene="modB"
                     /locus_tag="OQQ26_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HCS1855852.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
                     SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS
                     LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
                     LARISRERAGR"
     gene            complement(19261..20034)
                     /gene="modA"
                     /locus_tag="OQQ26_000241"
     CDS             complement(19261..20034)
                     /gene="modA"
                     /locus_tag="OQQ26_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1855853.1"
                     /translation="MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDI
                     ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQ
                     TLLGNSLVVVAPKASEQKDFIIDSTTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
                     GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKV
                     EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
     gene            complement(20201..20350)
                     /gene="acrZ"
                     /locus_tag="OQQ26_000242"
     CDS             complement(20201..20350)
                     /gene="acrZ"
                     /locus_tag="OQQ26_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux pump accessory protein AcrZ"
                     /protein_id="HCS1855854.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
                     PGQNH"
     gene            20479..21267
                     /gene="modE"
                     /locus_tag="OQQ26_000243"
     CDS             20479..21267
                     /gene="modE"
                     /locus_tag="OQQ26_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HCS1855855.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
                     LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
                     AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCE
                     VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
     gene            21335..22807
                     /gene="modF"
                     /locus_tag="OQQ26_000244"
     CDS             21335..22807
                     /gene="modF"
                     /locus_tag="OQQ26_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HCS1855856.1"
                     /translation="MSSLQILQGAFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
                     LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT
                     AEIIQDEVKDAPRCAQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILD
                     EPFDGLDVASRQQLAELLASLHQSGITLVMVLNRFDEIPEFVQFAGVLADCTLAETGA
                     KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPAKEPRIVLNNGVVSYNDRPIL
                     NNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK
                     RTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLICRFVDVLISE
                     GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY"
     gene            23068..24084
                     /gene="galE"
                     /locus_tag="OQQ26_000245"
     CDS             23068..24084
                     /gene="galE"
                     /locus_tag="OQQ26_000245"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308814.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HCS1855857.1"
                     /translation="MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN
                     GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGSSVLDVVNAF
                     SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYPD"
     gene            24094..25140
                     /gene="galT"
                     /locus_tag="OQQ26_000246"
     CDS             24094..25140
                     /gene="galT"
                     /locus_tag="OQQ26_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HCS1855858.1"
                     /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
                     LPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESKDPLMRCQSA
                     RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            25144..26292
                     /gene="galK"
                     /locus_tag="OQQ26_000247"
     CDS             25144..26292
                     /gene="galK"
                     /locus_tag="OQQ26_000247"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HCS1855859.1"
                     /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKH
                     LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
                     EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG
                     GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC"
     gene            26286..27326
                     /gene="galM"
                     /locus_tag="OQQ26_000248"
     CDS             26286..27326
                     /gene="galM"
                     /locus_tag="OQQ26_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HCS1855860.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQSFPGNLGATVQYRLTDDNRISITY
                     RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
                     SFDFRSAQIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
                     TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
                     YSSLTEYQFIAE"
     gene            27529..28281
                     /gene="gpmA"
                     /locus_tag="OQQ26_000249"
     CDS             27529..28281
                     /gene="gpmA"
                     /locus_tag="OQQ26_000249"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HCS1855861.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNETILPRMKSGERVLIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
                     DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(28440..29492)
                     /gene="aroG"
                     /locus_tag="OQQ26_000250"
     CDS             complement(28440..29492)
                     /gene="aroG"
                     /locus_tag="OQQ26_000250"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HCS1855862.1"
                     /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
                     KLMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT
                     DALLRQLANAVKARRG"
     gene            29808..30188
                     /locus_tag="OQQ26_000251"
     CDS             29808..30188
                     /locus_tag="OQQ26_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgS-like family protein"
                     /protein_id="HCS1855863.1"
                     /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQ
                     VAPDARENVAPNNVDNNGVNTGSGGTMLHSNGSSMNNDGMTKDEEHKNTMCKDGRCPD
                     INKKVQTGDGINNDVDTKTDGTTQ"
     gene            30301..31242
                     /gene="zitB"
                     /locus_tag="OQQ26_000252"
     CDS             30301..31242
                     /gene="zitB"
                     /locus_tag="OQQ26_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HCS1855864.1"
                     /translation="MTHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVIGGFLSGS
                     LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
                     ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
                     LGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPV
                     SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYL
                     MDHYQIEHAIIQMEYQPCHGPDCHLNEGVSGHSHHHH"
     gene            complement(31239..31958)
                     /gene="pnuC"
                     /locus_tag="OQQ26_000253"
     CDS             complement(31239..31958)
                     /gene="pnuC"
                     /locus_tag="OQQ26_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HCS1855865.1"
                     /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
                     ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
                     WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
                     FWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
                     LNGSRMWINSARERGSRALSH"
     gene            complement(31996..33040)
                     /gene="nadA"
                     /locus_tag="OQQ26_000254"
                     /pseudo
     CDS             complement(31996..33040)
                     /gene="nadA"
                     /locus_tag="OQQ26_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415271.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
     gene            complement(33289..33428)
                     /locus_tag="OQQ26_000255"
     tRNA            complement(33289..33428)
                     /locus_tag="OQQ26_000255"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33393..33395),aa:Lys,seq:ttt)
     gene            complement(33462..33537)
                     /locus_tag="OQQ26_000256"
     tRNA            complement(33462..33537)
                     /locus_tag="OQQ26_000256"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33502..33504),aa:Lys,seq:ttt)
     gene            complement(33684..33759)
                     /locus_tag="OQQ26_000257"
     tRNA            complement(33684..33759)
                     /locus_tag="OQQ26_000257"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33724..33726),aa:Lys,seq:ttt)
     gene            complement(33763..33838)
                     /locus_tag="OQQ26_000258"
     tRNA            complement(33763..33838)
                     /locus_tag="OQQ26_000258"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33803..33805),aa:Val,seq:tac)
     gene            complement(33890..33965)
                     /locus_tag="OQQ26_000259"
     tRNA            complement(33890..33965)
                     /locus_tag="OQQ26_000259"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33930..33932),aa:Lys,seq:ttt)
     gene            complement(33968..34043)
                     /locus_tag="OQQ26_000260"
     tRNA            complement(33968..34043)
                     /locus_tag="OQQ26_000260"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34008..34010),aa:Val,seq:tac)
     gene            complement(34179..34254)
                     /locus_tag="OQQ26_000261"
     tRNA            complement(34179..34254)
                     /locus_tag="OQQ26_000261"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34219..34221),aa:Lys,seq:ttt)
     gene            complement(34419..35210)
                     /gene="cpoB"
                     /locus_tag="OQQ26_000262"
     CDS             complement(34419..35210)
                     /gene="cpoB"
                     /locus_tag="OQQ26_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HCS1855866.1"
                     /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
                     SGGAAAQSTSSDQSGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
                     DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
                     AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
     gene            complement(35220..35741)
                     /gene="pal"
                     /locus_tag="OQQ26_000263"
     CDS             complement(35220..35741)
                     /gene="pal"
                     /locus_tag="OQQ26_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HCS1855867.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
                     ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
                     VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
                     AAYSKNRRAVLVY"
     gene            complement(35776..37068)
                     /gene="tolB"
                     /locus_tag="OQQ26_000264"
     CDS             complement(35776..37068)
                     /gene="tolB"
                     /locus_tag="OQQ26_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HCS1855868.1"
                     /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPGAWSALGIDAVVVG
                     QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
                     SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQN
                     QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
     gene            complement(37201..38430)
                     /gene="tolA"
                     /locus_tag="OQQ26_000265"
     CDS             complement(37201..38430)
                     /gene="tolA"
                     /locus_tag="OQQ26_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HCS1855869.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
                     GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
                     LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA
                     KKAAADAKKKAEAEAAKAAAEAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEVAEK
                     AKAEAEKKAAAEKAAADKKAAEKAAADKAAADKKAAAEKAAADKKAAAAKVAAEKAAA
                     AKAAAEADDIFGELSSGKNAPKTGGAKGNNASPAGSGNTKNNGASGADINNYAGQIKS
                     AIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPP
                     SQAVYEVFKNAPLDFKP"
     gene            complement(38495..38923)
                     /gene="tolR"
                     /locus_tag="OQQ26_000266"
     CDS             complement(38495..38923)
                     /gene="tolR"
                     /locus_tag="OQQ26_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HCS1855870.1"
                     /translation="MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
                     PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            complement(38927..39619)
                     /gene="tolQ"
                     /locus_tag="OQQ26_000267"
     CDS             complement(38927..39619)
                     /gene="tolQ"
                     /locus_tag="OQQ26_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HCS1855871.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            complement(39616..40020)
                     /gene="ybgC"
                     /locus_tag="OQQ26_000268"
     CDS             complement(39616..40020)
                     /gene="ybgC"
                     /locus_tag="OQQ26_000268"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HCS1855872.1"
                     /translation="MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
                     LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
     gene            complement(40170..40463)
                     /gene="ybgE"
                     /locus_tag="OQQ26_000269"
     CDS             complement(40170..40463)
                     /gene="ybgE"
                     /locus_tag="OQQ26_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HCS1855873.1"
                     /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
                     ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF"
     gene            complement(40463..40576)
                     /gene="cydX"
                     /locus_tag="OQQ26_000270"
     CDS             complement(40463..40576)
                     /gene="cydX"
                     /locus_tag="OQQ26_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HCS1855874.1"
                     /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI"
     gene            complement(40591..41730)
                     /gene="cydB"
                     /locus_tag="OQQ26_000271"
     CDS             complement(40591..41730)
                     /gene="cydB"
                     /locus_tag="OQQ26_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCS1855875.1"
                     /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
                     FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
                     GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP
                     LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
     gene            complement(41746..43314)
                     /gene="cydA"
                     /locus_tag="OQQ26_000272"
     CDS             complement(41746..43314)
                     /gene="cydA"
                     /locus_tag="OQQ26_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415261.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HCS1855876.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD
                     QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSSTTTQPAR"
     gene            complement(44161..45081)
                     /locus_tag="OQQ26_000273"
     CDS             complement(44161..45081)
                     /locus_tag="OQQ26_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855877.1"
                     /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
                     NEYKYYVLDGQTAILEDYFAVKPENKDRVKKLVEAGKLIIGPWYTQTDTTIVSAESIV
                     RNLMYGMRDCLAFGEPMKIGYLPDSFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPD
                     SQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPE
                     SYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVIFCSETMMD
                     EHITTEENQGSNLSGPFLPGQSRTFSYRLA"
     gene            complement(45099..47015)
                     /gene="mngA"
                     /locus_tag="OQQ26_000274"
     CDS             complement(45099..47015)
                     /gene="mngA"
                     /locus_tag="OQQ26_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001393949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS 2-O-a-mannosyl-D-glycerate transporter
                     subunit IIABC"
                     /protein_id="HCS1855878.1"
                     /translation="MNLTTLTHRDALCLNARFTSREEAIHALTQRLAALGKISSTEQF
                     LEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVV
                     LLAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATTPDELLSALDDKGGSQPSASF
                     SNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVYVEKQGANGIEGRLTADQLNS
                     ATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDT
                     QPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMY
                     RKLGGGMLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMVGSGFLGAVVGGLIAG
                     YLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNG
                     LSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFT
                     VTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTG
                     AIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRRH
                     AVKHGNYLTDGVMP"
     gene            47184..47906
                     /gene="mngR"
                     /locus_tag="OQQ26_000275"
     CDS             47184..47906
                     /gene="mngR"
                     /locus_tag="OQQ26_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-D-glycerate transport/metabolism system
                     transcriptional repressor MngR"
                     /protein_id="HCS1855879.1"
                     /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
                     TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
                     EVIPADDFLQQQLQITAQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
                     KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQAKPILEKVSRGYLVDGRVFEY
                     SRNAFNTDDYKFTLIAQRKSSR"
     gene            complement(48010..48879)
                     /gene="sucD"
                     /locus_tag="OQQ26_000276"
     CDS             complement(48010..48879)
                     /gene="sucD"
                     /locus_tag="OQQ26_000276"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HCS1855880.1"
                     /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
                     GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
                     AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKTVLK"
     gene            complement(48879..50045)
                     /gene="sucC"
                     /locus_tag="OQQ26_000277"
     CDS             complement(48879..50045)
                     /gene="sucC"
                     /locus_tag="OQQ26_000277"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HCS1855881.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIG
                     AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
     gene            complement(50139..51356)
                     /gene="odhB"
                     /locus_tag="OQQ26_000278"
     CDS             complement(50139..51356)
                     /gene="odhB"
                     /locus_tag="OQQ26_000278"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HCS1855882.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAP
                     AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
                     QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
                     RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
                     TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK
                     ELLEDPTRLLLDV"
     gene            complement(51371..54172)
                     /gene="sucA"
                     /locus_tag="OQQ26_000279"
     CDS             complement(51371..54172)
                     /gene="sucA"
                     /locus_tag="OQQ26_000279"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HCS1855883.1"
                     /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
                     FQQLPGTGVKQDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
                     YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
                     AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
                     FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
                     QEVLQQFANVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLHYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVE"
     gene            complement(54473..55189)
                     /gene="sdhB"
                     /locus_tag="OQQ26_000280"
     CDS             complement(54473..55189)
                     /gene="sdhB"
                     /locus_tag="OQQ26_000280"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit
                     SdhB"
                     /protein_id="HCS1855884.1"
                     /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRNA"
     gene            complement(55205..56971)
                     /gene="sdhA"
                     /locus_tag="OQQ26_000281"
     CDS             complement(55205..56971)
                     /gene="sdhA"
                     /locus_tag="OQQ26_000281"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HCS1855885.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            complement(56971..57318)
                     /gene="sdhD"
                     /locus_tag="OQQ26_000282"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             complement(56971..57318)
                     /gene="sdhD"
                     /locus_tag="OQQ26_000282"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HCS1855886.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            complement(57312..57716)
                     /gene="sdhC"
                     /locus_tag="OQQ26_000283"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             complement(57312..57716)
                     /gene="sdhC"
                     /locus_tag="OQQ26_000283"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HCS1855887.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFV
                     AVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
                     YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
     gene            58097..58204
                     /locus_tag="OQQ26_000284"
     CDS             58097..58204
                     /locus_tag="OQQ26_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855888.1"
                     /translation="MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV"
     gene            58410..59693
                     /gene="gltA"
                     /locus_tag="OQQ26_000285"
     CDS             58410..59693
                     /gene="gltA"
                     /locus_tag="OQQ26_000285"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HCS1855889.1"
                     /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
                     EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR"
     gene            60083..>60456
                     /locus_tag="OQQ26_000286"
     CDS             60083..>60456
                     /locus_tag="OQQ26_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1855890.1"
                     /translation="MFKGQKTLAALAVSLLFTAPVYAADEGSGAIHFKGEVIEAPCEI
                     HQDDIDKEVELGQVTTSHINQSHHSDAVAVDLRLVNCDLENSSNGSGGKISKVAVTFD
                     SSAKTTGADPILNNTSTGEATGV"
BASE COUNT        15425 a        15834 c        14517 g        14680 t
ORIGIN      
        1 cggtgactct gctcattgct gcccccacaa acagacttca cgctcaatct cacgacgggt
       61 catcagccct ttccattgct taccgccagc atatgtccag cgacgtagct ggtcacatgc
      121 gcctttgata tcgccctggt ttattttgcg aagaagcgtc gatgttctga aattgccagc
      181 gcccacgttg taaacgaacg agtaaagagc gccgcgcgtt gtttccggta tatcgacttt
      241 gatgtacggg ttaatttgtc tggcgacagt ggcaaggtct ttattcagga gagctttgca
      301 ttctgcttcg gtatacgttt taccaggcat gatgtctttt ccggtgtgtc cgtgacatac
      361 agtccataca ccaatgatat ctttgtatgg tatgtagctg acaccttcca gaccatcgtt
      421 accacctggg ccagtgatta acacagatgc tatagcaaca gccccgccac caatagcaac
      481 tgcaacagcc ttgcgtaatg atggcgacat tattcacctc tcgcagcctt acgcttatct
      541 tctcttattt tgaaatacag attcgtcaga taagtcagaa gccccagaag cagacttccc
      601 agcacaccaa tcgcagccca ctgtgatgga ctgacctgat ccaaccactg caaaaaccag
      661 tagccggcac tgccggcgga ggtgccgtag gcaatgcctg ttgatatttt ttccatctga
      721 tacatatccc gccccccgac agacctgtgc tatcggaaag aaaaaaggcc atcagcaaaa
      781 ctctgatggc ctgaatcacc tttaccaata ttgtatgaaa aaacacgcac gtctaattga
      841 caataatttt catttccatt aaaaaagatc gcgtagcatt cttaattcat gaggaacttt
      901 acccgccagc aatctgagta gcgaaagctg ttcatcccca atgtttttgc tggcgggtcc
      961 ttttttctac ggtcctcctc cccggagggg gcatttcatt atttttctaa tcattactgg
     1021 tgagaaggcg gaagaaaaag ccagttcttc gcccctaaat aacagcatga ttccagtcca
     1081 tgcaaaatct gatttccagc tcacacatac cgagcactgt acaaaaaacc gccagccaag
     1141 gcagttaaga gtgtgttccc ggggtttgct tagaatattt tgtaagttgt ccgaagagat
     1201 atttacaaca ccagaatgat gcattatcag tcccctgcca gaggttcact acgtaacctg
     1261 accgacaatg caccattctg gtgctgaaaa aagagcactg gaactgcaac aaaacaacat
     1321 cacagaacag gagatggtaa ggagtcagac attcccacac aatattgtgt cagtgcaaat
     1381 aacaaccttc gtctcaaatc tcgctggagc gggcagcggg aatcgaaccc gcatcatcag
     1441 cttggaaggc tgaggtaata gccattatac gatgcccgca tatggtgccg actaccggaa
     1501 tcgaactggt gacctactga ttacaagtca gttgctctgc ctgctgagct aagtcggcgc
     1561 tggcccacca ccgaggactc gaacctcgca ccgtcaactt agaaggttga tgctctatcc
     1621 ggatgagcta gtggtggttg gtggcccttg ctggacttga accagcgacc tggcgattat
     1681 gagtcgctcg ctctgaccaa ctgagctaaa gggccggagg cagaataata accatatgtc
     1741 atcacatctg caaactcatc tgaccaccag cacgtttaac gtcctgtgcc gtttttcagg
     1801 tataaaaaaa cccgcataaa gcgggctctt tcaaatgtcc atgtctgcta ttcgcctcgc
     1861 ggtacagctt tgcgaagcgt acaagaattg aagcagtttt tacgtcaaaa agcaataact
     1921 tttttctcta taccaaaagc cataactatt ggtttgtaca aaataaattc tgccaccttt
     1981 agccaatgct caatgcgtct ttcacaggtt cttaaactcc atttcgggtg tgcatcattc
     2041 agcagttcag ccattttgcg tttggtcatc ccccgcccct cataccgttg ccgaaggacg
     2101 ctaatcaatc ctggatgctc tgccagcacc tcacttatga cccgatcaat acataacgcc
     2161 tctgcatcag tacaatgcgc cagccagctc ttttgcttac cgttaatcat atcccgcaaa
     2221 aaagcctcaa gttcagactt gttcagacct gcttttttca tcctccggag cgcctcgtta
     2281 attgccgttt ttgtcagctt tttagaggtc aacatcaggt taaacatatt ccccgtctta
     2341 ccgccaccaa tatacgacca gcgcccccac atacgtagtt ttccctgaat ccagacactt
     2401 tccagcgtgg tgagacgaag gtgttctccg ctttttcctg tattcgttgg gtaaatcata
     2461 aatatccctc ctttctccag atttcttgtg tgcgaaaaac accttctgca tgcatcaggc
     2521 gtaattcttc tttggtgtaa tcgctggttt ttacccgccc gtcgattaaa tcgtggcacg
     2581 agctacaggc aatcgctgcc tgcatatcgt gtggctttat cgctgttccg cacgttcccg
     2641 ccagtcggta atgcgccagc acagacgttt ccggatcgtg attgcagtag ccaggaattc
     2701 tgacggtgca catctgcccc cgcgccgctt taagtaaatc caccattacg caaactccag
     2761 cagctgcgcg gccacatttt cgacttgttc cggagaggaa aatttacgga acagaatcca
     2821 gttccacagc acattcagta cagatttata aacctgctga aactcggttt cgtccatatt
     2881 cgcaaacgcg atagatttcg cccgacaccc acggctaccg tccggataaa aatgctcggt
     2941 gtaaaatccg gcctgaatgg ctacccactc gcggaaagcc tcaaacgact ttagcaatgc
     3001 cgtatcacgg gttctgcgtg tcgcaactgt attcagatat tgctctgcgg cttcgctcag
     3061 agctggcgta tgttcccggc ctactaattc acacaggtaa tcaacgaaac cggacaccag
     3121 ttttcgttcg cgaggcgtga tcgccccacc gaccggagtc cagtaatcga aacccagttg
     3181 caggagtttg aaaaaacgct tgtggaatgc gtagttacgc acacgcttaa agtctgcgtg
     3241 tatccactca cctattttga tttgatgcag aaaatcgcaa ctctccggcg tcgccgggag
     3301 aagtaatccg gaagaggttt gtttgaccag ttgtatatgt gccatcggct ttctccggtg
     3361 gcacggtgtt acacagcagg agttcaatcc tgctcaagat tgtagatgag tttattcttc
     3421 agcaaaagca gaaaaccagc cttaaaacca atctctttca aaacccgtaa tgatgtgaca
     3481 aattcgtcct cacgcaaaat aaaaccgtcc gtcagaagtc cattacaaaa ataaaataac
     3541 acagcaccgc tcttcctttg ttgagattgc aaacatctaa tgcggcaatg gctgacaatc
     3601 gctccattct caacgcgcac agcatagagg ccattttcac taaaaatttc acgcaattct
     3661 tcgattttca tcttcagaat ccttccagat aaatagctct cccctgttcg gggtccatcc
     3721 ctcttctccc tgcgcgctac ttaagtgagt cgattctatc tgcgaaggtg cgcgaatcaa
     3781 attcaccgga aataaacaac aaaaaacccg ccgaaacgct gagagatcac agcgatgggc
     3841 gggttaagtg cgggtgcgtt gaggatgcct gacacatcag aggtgggcgg ggatgggatc
     3901 agctccccgc ccggtcactc ttacttcctg gattcgtagt ctacgaagac agcgacctcc
     3961 gtctggccgg ttcggattcg tacctcacag aggtctttcc tcgttaccag tgccgtcact
     4021 atgacggtta aacagatgac gatcagggcg attaacatcg ccttttgctg cttcatagcc
     4081 tgcttctcct tgcctttcgg catgtaagag gctaacctac atgtgcaaag catgaaattg
     4141 gcctcagatt aatgttaagc gtcttgccgg acgcgtaatg ttaactgggg cttttctcta
     4201 tctgcctttt ggtgttcatg cctgaagcag atagcctcaa gcacccgcag tcattctact
     4261 tacctcgcca atatgaaatc aatcagaaag gtgccccata aaatcactcc ttctcttctt
     4321 taccgtagtg gagttgacca attttgataa gagggcgtcc ctgagatttg cggtgtagat
     4381 tggtatcgcg cagagaatac acacagccac aatattcctg ctgatagaat ttttcgcgct
     4441 tgctgatttc aatcatacgg gacgagccgc cctgcttgcg ccagttataa tcccagtaca
     4501 ccatgcccgg ataatgcgcg acggctcgcc gcccacagtc gttaacctgc tgcatatttt
     4561 tccagcgtga aatgcccagt gaactgctga tcacactgaa accattttca gcggcgtaca
     4621 gcgctgtccg ctcaaaacgc atgtcaaaac acatggtgca acggatccct cgttcgggct
     4681 cccattccat tcctttggct cgttcaaacc agttgtctgt gtcgtaatca gcatcaataa
     4741 acggcacgcc gtgttgttca gcaaagcgaa tattctcatc cttacgaatt aaatactctt
     4801 tctgaggatg aatgttcggg ttgtagaaaa agatggtgta gtcgattccc gaggcctgaa
     4861 gcgcctccat cacctcaccg gaacatggag cacagcaaga gtgcagtagt agtttgtttg
     4921 ccccgtttgg gagctccaat ttgggccgtt tgaaatcagc aactgtcata aatatgttta
     4981 ttggggtcat aaaaatatca aagagtgtag cattagaacg gggctatcgg aaacagatgt
     5041 gtgactgctc cccgcccttt cgggcggtct cctgatgatt tgagggtgca gaaatccctc
     5101 cggttaagga ttaaattttt aacagtgcta aatttaatta ttcagttctg gattttgtcg
     5161 ccctgcgtat ccgcgctttc gcgttacgct caatctgtat cagcttttct atatttctcc
     5221 gcctttcctg ttcctcctgg cgcaatagcc ttacatcatc tgccagtctg gtttctcttt
     5281 ttgccacaga gagcatccag tcaaacggct ccacaaccgc accgcagatt ttacagcgga
     5341 cctgacgctc tttttcgtca acccgtacag aggcgtgatg gcaatatggt ctttccgatg
     5401 gctcataaag aaaattaacc tgattacgag ggccatcctc ttttatcgga aataaaacga
     5461 tattgcttaa ctcatcttct gggtttattt ccatgctcct ctcctttgat gcgaatgcca
     5521 gcggtaattg aagcctgata gctaatttca ttcacagtat cgcctcctga aaattaccct
     5581 gatagaaagc cagtacacgc tgcatagctt cgctcttccg gcactcgcga cagattatat
     5641 tcaggcgcct gtcgtagcga cgtatttctc cgtcaggtaa tgaccagata aggtccggat
     5701 caacaacaac cggtttcctc acctttactc tcgagagttt tttgcgggcg ctttgccagt
     5761 ccttgcgagc ctgttcagac gggaataagc cgtagccaga attatataca tcaccacttg
     5821 cgaccagttc tatgcataag cgaccgacag acgcacgact gatacctgtt tcatcggaca
     5881 actgccgaat cgtgacccga ccgtcctgat gcacgagttc cacaattcgc gtcttcagtt
     5941 cttcccgctg ttcgggagta aaaggtttcg ccataaatcc tcctgaaact acttaacaac
     6001 cctcgaatgg ctaacattcg gacgccagct ctcccagtta aaattcaccc agcgcccgcc
     6061 gttcatgacc atgcgatcca tcacccgctc gccgagcaat gttttcatca cctcatagtt
     6121 caggtttgtc agcatcccca cgctgcgcat cgacgctgtc cggcgatcaa caatctggtg
     6181 cagcaccacc tgctcgtttt tcgtctcgcg ctgaatgcca atttcatcaa gaaccagcag
     6241 atccacttcg cacagctccc gcaaaaattt ttcgcctgac tgcccgtcgt catagctggc
     6301 gtgcagggcg ctcataacat cagccacggt aaccacaatc actgtctgac cgtctttcag
     6361 caggcgattc ccgatagctg ccgctaagtg attcttcccg gtaccaggtt ttccgctgaa
     6421 cgcaaaattt gtacacccgg tcatcagttc atcggcgatg gatttcgcct ggcttaacgc
     6481 gtatcgctgg ccgtcgttct gcacctggta attcgcaaac gagcatttac ggtgcaacgg
     6541 ctggatgcct gagcgattca gaattttttc cacccgcaac tggcgattca ggcggttgat
     6601 ctcctcgcta cgtttctggc cttcagcaag ttgccactcg cgccactccg ctaccgttct
     6661 gaatggggcg gttacatgtg gcggggtcag tcggcggatg cgttccagaa cgccgcctgt
     6721 cgcaatattt ttcatggtcc gttaccccct gaagcctggc gggatcgcac tgtccggcaa
     6781 cgagacggtg ttaacctgtc ggagcaacgt ctcaggccga acacctttcg gcgcgaacag
     6841 gccctggtat tcattggcga tgctgtgtcg aatcacctgc tcaggtgtaa aaccctgctg
     6901 acggaatttt tccagttccc gtatcgcccc gttagcgccc tgctccgttc gaatcggttt
     6961 tcgcaatgcc tgtctgaacc ggacccactc atgccagagt gtttccggca accaatcggg
     7021 cagctcaata gcctccggct cgaatttttt agacgctcgt ttttggcgag ggggatttag
     7081 ggggagatca gtatttagat cttcctcttc ctctggtaac gctttttgat ccgtttgtgt
     7141 aacgctggca gcgttacctt ttcgtttcag ttcgcgtatt tttgttactc gctcgtttgt
     7201 aaccgcccgt tttttttaga gctttttccg ttatgacgtt caaagttagg tagagaaagc
     7261 ccaccgtcat tttcgaccag ccatccaacc tgaattaacg catcagcaaa accagacata
     7321 aaagtgatgc gatctattgc actttttgta acgccgcgag cgttacaatc tgcattaccg
     7381 tctatcattt gttgatccgc ccatgcccag aagcgaataa ccttccctaa tgcggcatct
     7441 ggatcaatat tcagaatctc agcaagcctg aatatttccg gcttatccgg cgtaataacc
     7501 tcgagcttta tccagtttga agccatttgt tttcaccttg taacgctcgc agcgttacat
     7561 ttaactgata ccgaacaaaa caatccggca cgattaattt caatcaatgc actacgacag
     7621 aatcgccggg cgacccacca ccgctgaaat gtgctttccg gtaaacggcc tggacagcat
     7681 catcatgcgc atcaattgcc gtactcaacg cttcctgcgc cgccagtaat gcacggcgtt
     7741 ccagggtatc gaagatacag agtcggtgac gcagctcacg cggaagaatt gccagaaccg
     7801 cagggatcag tttctgaatt ttttcccttt gcgctttcgt ttcacctttc aaccaacggt
     7861 gatagatatt ctgctgattg ttccagtcct tgcctggtac cagagacaat tcgccgcccc
     7921 cctgccgcag atattcttca gtaattgcgt tagcgaccca cgcctgccct ttttcggctg
     7981 ccagggctaa cagcactgat tcgatgtgct catgcctgat tttcatgaat caccttccca
     8041 ggtcgttttg ccttacgata ttcgtcataa actttggggt cgtactgaag ttccccgcca
     8101 gatgcctctt gcaggcgcat cgcgcgacct tcaggaacca gttcccccca tgcagcaatg
     8161 cttgccagcc taactcctgc ggcattggca agctttgttt tgctgccaaa aaacgctata
     8221 gcatcaattt tcaacatatc gagctcctta gattttccta agaaaaccag atcgtagaga
     8281 aacctaagtc aagaaaaatt agaattccct aatatgaaaa acgaaacctt cggtgctcgc
     8341 ctcttacata ggcgtaaaaa attaaaactg tctcaggccg cattaggtaa gctggtcaaa
     8401 gtggctcacg taacaatttc tcaatgggaa agagatgaaa cacagccggc ggggaaaaga
     8461 ttattcgcac tgagccaagc gcttcagtgc tcaccgactt ggcttctttt tggggatgaa
     8521 gataaacaac caggcgaacc gatcccggat aatcagccag ccattctgac agaagatcaa
     8581 aaagagttac ttcaactgtt cgacgcactg cctgagtcag agcaaaaggc cctgttgtca
     8641 gagatgcgtg ctcgagttga aaatttcaac aaactttttg aagaactact caaagctcgc
     8701 aaaagaagcg caaacaaata atcccctttt ttctccacac cctgtaataa aaagcacaaa
     8761 ctttcaaaca cttgtgtttt ttacatcaaa aaacttaggt ttttctacat aaaaatcttg
     8821 accacccacc ttaggttatt ctaaatttca ttcatcaaga caccgcacgg tgttctcagc
     8881 aaacagttcc gctaccccgg cgttaagggg aaatggggtc aacatgaata ctatcgatct
     8941 tggcaacaac gaatctctgg tgtacggcgt gttccccaac caggacggca cattcaccgc
     9001 catgacgtat accaaaagca aaacgtttaa aaccgaagct ggcgcacgtc gttggttggg
     9061 aagacattca ggtgagtaaa gtgaacgaga cagaattaaa acacgttatc gctctactcc
     9121 cagaagatgc aaaacgcctc cagcaactgg agccaaatgc aggcactggg gcacgcatct
     9181 ggctggctaa agaagcgctg gaatctggcg attatgatag cgaagaagcc ttctacaaag
     9241 cagaaggccg tgcaggatat tcaccgggtc ttggcggggt ataaatacca tgcgcattga
     9301 ctgaattcgc aaacaaaaac agacgcgcga tacccggata gtcggtctgc atagtcagat
     9361 atctggctgc gaatttgata aatatcaccg cccttttcgg aaacataagt tccgtccggg
     9421 agttgattat acgaaccatc tccatggggg atcgttctcc tgaatcctag tgagagcata
     9481 tatttatgaa gcccttcgta atcctctggc tcagcattat atagttctac tctggcgaga
     9541 tacgttggca tattcatttc cttactggtt gtgcgagaac ttcagtaaag ataccaccaa
     9601 agcccggagg tggtgaaata aaaccgggca caacacgaag gcgcatttcc ggtatccata
     9661 aagagtcggt cttgtctgtt aaatttaaat ggtgggagtg cgcctccggt tgtaaataac
     9721 gacattgctg tgtgaagtac cagttggcgg catcggttta attgctggct gatgtccgcc
     9781 ctttttaaag tgaattttgt gatgcggtga atgcggctca gcgcacgcgg aacagttaaa
     9841 acagtaagga aaatccctta ttccggcgtt aattattaac tggttaacgt cacctggagg
     9901 caccaggcac cgcatcaaca aagttcactt cggtgatgaa aggaaagaga aaatgttgaa
     9961 tgtagctatt gaaaaccaga acgggtggaa ttatagtgca cctgcacctc ataaaacggg
    10021 tgccgggatt gctaccccga agtcattcac ggcgcataac cgcgctcagg cggttttttt
    10081 atgcgtaatg cacagccaca ttcaaattat ggtggggcgt gcggggcagt cgcaagactg
    10141 gccgggttcc gtgatgaccg gttgtagcaa ccctgtacgt ctcaccaccc atgagattgc
    10201 tacctccggt ggtgagttaa tcaaattcat cgcggaggct gccatcatgg ctactaccct
    10261 ttctcaccct tgtgtaaccg tagaaaacgg tcgcgctgtc actacgtctg ttgcggttgc
    10321 agagttcttc cacaaacgac acgacaatgt gttacgtgcc atcgcaaata ttgaatgctc
    10381 agataaattt actgccctca attttgaggc gagcgaatac accgactcaa ccgggcgcaa
    10441 actcccaatg taccaaatca ccaaaaacgg cttcgttttc ctggtgatgg gcttcactgg
    10501 caaaaaagcc gccgcattca aggaagccta cattgctgag ttcgaccgca tggaggccga
    10561 actgcgccag aataacaccc cacctgctga caagatgatt ccgggtgatg gtcgcactct
    10621 ggttgttcac ttcgacaaat tcggcaatgt cgaattcacc gaaaccgttc ctgatggcgc
    10681 actggtctgt accctggaga ctttccggtt ttatctggaa aaacagggat ggactcttgt
    10741 taaccggggc gcaattaaaa atatgactgt ggaacaatta ctttctttaa aataaaaatg
    10801 gagctacgga tatgaaccct atgcttgatt attgttttac ctctgcacct cagcagacca
    10861 taacacacac cggaatcaaa aaattgttat ggataatcaa aaaaaacctc cagcagaaag
    10921 gtgatcccga tttaattccc tgtgcttatg gcctgtgtga cagacaagta agccctgata
    10981 aggcttacac tgctgaactt atttacatgc acggaaccat gatgaggaaa aagaaacgca
    11041 aatattgtag tgaaatctgc gccgaaaaag accagatggc acacgaactt taattaactg
    11101 actattcgaa actgaattta tgccagcaat ggcagggatt cgctcaacct taattaagga
    11161 gaaaaacatg aacaccaatt atgaagccac tgttgcaact actgataaca ttgttcacga
    11221 ggtttacctg gaaggaaagc atattggcta cgtaattaaa acagaaaata aagaaacccc
    11281 attcactgtg gttgatatcg acggtctatc aggaaacttt aaaactcttg ttgaaggtgc
    11341 cacaaaaatg tgcctggttt acatcggaaa taatctgccc gcagaaaaaa agccgaattt
    11401 ctggcaactc tgattgcaat gaaattaaaa ggtgaaatct gaaaaaaaga aagcctgcac
    11461 agtgtgcagg cctgagtgaa gaacctggga catttattca tcactcgcag taattttaat
    11521 ctgagttgag gttaaaaaac aatgagcaca aaaccactct tcctgttacg gaaagcgaaa
    11581 aaatcatccg gtgaacctga cgtcgtcctg tgggcaagcg acgattttga atcgaccagc
    11641 accactctgg actatctgct cgttaagtca ggtaaaaaac tgagcaacta ttttaaagct
    11701 gttgccacaa attttcctgt cgttaatgac cttccccctg aaggtgagat cgattttacc
    11761 tggagtgaac gctatcaact cagcaaagac tccatgacat gggaactaaa accgggagca
    11821 gcgccagacg acgttcacca ccaggataat gctcaagaaa ccaaagaact ggcgggaggc
    11881 taggaagaaa acgcgcaggc agacgcccac gaggattgcc aggattgcga agtctctgta
    11941 gccactttgc ggttcacaca gcgtcttctg cacattttta cgtatgctgc cggggatcgg
    12001 aaatacctgc atcatgccac ccgtgaacaa cgcaaacaca ttactgctct tgagatggat
    12061 caggaaaaca gctatgtcca gaatctgctg ttggccatac gcggcatggc agaaccgaca
    12121 actctggata atgccgccct gctccgcctg actgatgcaa ttaaggcagt tttctctatc
    12181 acgaaaaaac atcagcccta tgaatttaag aatttcattt cagcctggct ggataccgaa
    12241 cacattgatc gcggtcttct gacaaaagaa tggcgaaaag ggaatcgtgt ttcacgcatc
    12301 actcgcacga cttccggtgc taatgctggc ggcgggaacc tcaccgatcg cggcgaaggt
    12361 ttcgtccacg atctgacgtc actgacgcgc gatgtagcca ctggcgtact ggcccgttca
    12421 atggacgtgg acatctataa ccttcatccg gcacacgcta aacgcattga ggaaattatc
    12481 gctgaaaata aaccaccctt ttctgttttc cgcgacaaat tcatcaccat gcctggcggg
    12541 ctggattatt cccgcgccat cgtggttgcg tccgtgaaag aagcaccaat tgggatcgag
    12601 gtcatccccg cacacgtcac tgaatatctg aacaaagtac tgactgaaac cgatcatgcc
    12661 aaccctgatc cggaaatcgt ggatattgcc tgcggtcgct cctctgcccc gatgccgcag
    12721 cgagtaacag aagaaggaaa acaggacgat gaagaaaaac cacaaccatc tggcgcaatg
    12781 acagatgaac aggcaacggc tgaaacagtg gaaccgaatg caactgaaca tcatcagaac
    12841 acgcagccgc tggatgctca gtcacaggta aattctgttg atgcgaaata tcaggaactg
    12901 cgggcagaac tccatgaagc ccggaaaaac attccgccca aaaatcctgt cgatgcagac
    12961 aaattactgg ctgcctctcg cggagaattt gttgaaggga ttagcgaccc gaatgattcg
    13021 aaatggattc ccggtcatca tatctcctca aatgaagtca aaaaaacgga aaatgaagtg
    13081 cgacagactg aagataaaca gcaccagaac agcgaaccgg aggagggaac accctgcaat
    13141 cagactggcg aggataactg ccctgactgt ggcgcggtga tgggagacgc aacttatcag
    13201 gaaacttttg acgaaaaaaa accagatgaa gcacaggaag aagagccgaa gaaaacggaa
    13261 aaagctgatg atttgttacc ggagaacgct ggcagcgatc agcataatga tagcaataat
    13321 gaaactggcg aagatgaact caactggaaa aaacaggtgt tgattgcggc ggtttacggt
    13381 ttatgtgcga atcctgcgtg catagcctat gcgcctgcaa tccctgacat cgcaatgatg
    13441 attgccaaca agcttgaaaa ttttggagtg accagtgatg agcgcttacc cgatttttga
    13501 tcgtattgaa gaaatggcat gggctcgcca ctaccagcag atcgttcgtg aagaaaaaga
    13561 aacggaactg gcggacgacc tggaaaaagg tctgcctcag cacctgtttg aatcgctctg
    13621 catcgaccat ttgcaacgcc acggtgccaa taaacaggca atcagccacg catttgatga
    13681 tgatgttgag tttcaggagc gcatggcaga acacatccgg tacatggctg aaaccattgc
    13741 ccaccaccag gttgatattg atttggagga ctaaaatcta tggcgctttt tcaacgagca
    13801 ataaacacac aggcctatct aaaagcagga attatggggt ttgctggcga cggcaaaacc
    13861 tacacagcaa gcgaactggc tattggtctg gtaatgctta tgcggcaacg gggaattgaa
    13921 gctggtaacc gcccggtaat gtttctggac acagaaacag gctctgactg ggttaaaccc
    13981 cgctttgatg cggaaaatat cgaattattt acggcaaaaa cccgctcgtt tgttgatctg
    14041 cttgaagcca ttaatgaagc ggaaagcagc ggttccgtaa tgatcatcga ctccatcagt
    14101 cacttctgga ccggattatg cgacgagtat gccagacgcc gaaaccgtaa acgaggactg
    14161 gaattttcag actgggcgtg gctcaaacag gagtggcgac gctttaccga tcgatttgtt
    14221 aacagtcagg cgcacattat tatgtgcggg cgtgcaggat atgagtatga ctttttcgaa
    14281 ggtgatgatg gcaaacgcca gttggcaaaa accggtataa aaatgaaagc agaaacagaa
    14341 accggttatg aaccctccat cctgatccag atggagaagc aaatgaacat agaaaccggt
    14401 caggtgtggc gcaccgccag aatactaaaa gatcgctcca cccgtattga tggacaggta
    14461 ttttcaaacc caacatttaa aaactttctt cctcatatcg agtttcttaa cctgggaggt
    14521 gaacacctcg gcatcgatac ctcacgggat aacagtgaat tatttgccaa cgacggtaca
    14581 ccgacatggc taaaagaaaa gcgtgcaaaa gaaatcacac ttgatgaaat tatcgagttg
    14641 ctcaacaagc accatggggg caccagtaac gacgccaaac gcgcaaaagc tgatttgctg
    14701 gaaaaaacat tcacctcccg ctcatgggaa agaatcaaag gtatggactg gccgacaatc
    14761 aaagctggtc gtaatgcact atggattgaa ctggaaggcg ttgaatatgc attcccggat
    14821 ccacaaacac aaaacgaaac gcaacaagca ggatacgatg agaatattcc ggtgtaaaac
    14881 caagtgcatt ttgaacacgg tttttgaaaa tattaatgta ggtgttcatg tataaaatta
    14941 cagccactat tgaaaaggaa ggtggttctc ctaccagctg gacaagatat tcaaaatcta
    15001 aactaacgaa atcagaatgc gaaaaaatgc tctcagggaa aaaagaagca ggcgtttcca
    15061 gagagcagaa agtaaaactg ataaatttta attgcgagaa acttctgtcc tcgtgagttg
    15121 cattatatca aaattagaac ttcatagctg attattaaaa atcaaccacg cccgccagta
    15181 ttctgtatat ttactggcgg tcatattaca ggaatatgac atgtatttga cactcaaaga
    15241 atggaacgcc cgtcagttac gtccacgaag cccagaaacg gttcgccgct gggtgcgaga
    15301 atgtaagatt tttccaccac cgataaagga tgggcgtgaa tatttatttc atgagtcagc
    15361 aaaaaaatta cacctcaaac gactggcggg cttttgcaga gaatcagaaa tgaccggacg
    15421 aagaagaaac tcaaacacac gtgatctacc acccaatctt tacaatcgag gtggatatta
    15481 tagttatcgt gacccacgtt caggaaggga gtttggaatc ggaagagaca aaagaattgc
    15541 agttaatgag gctattgcgg caaatatgga attattatcc acgcaacata taagcttact
    15601 ggatagaata aaaggtaata gcgtaacatt attctacgag ctgatattaa atttcagaaa
    15661 tgaaatagag cgtagacaat taagcacaaa caccatgaaa agacacaacc agaggttgaa
    15721 aatcataagt gaatactttg gtggtgttcc ggttaaaaat ataggcataa gggaggtgta
    15781 cagctttctt gaaatcagag cagttgggag taaatttgct attgctaacc agtacagggc
    15841 gcttttatca gacattttta aaacagctat agcttctggt cttgccgaag aagatccagc
    15901 ttctgcaacc aggccattca gaactgaagt gaagcgcagt cgactgttaa ttgacgagta
    15961 tctgttaatc aggaaaatag cagacgtcca gaacgaatgg ttcggccttt gcatggatct
    16021 tgcactggta acaggacagc gcgaaggaga tctggcggct atgagatggg aggatataag
    16081 agatggcagg ctatacgtgg aacaacaaaa aacaggggca aaaattcgca tttctctccc
    16141 caccacgatt tccagattga atttaacact tgccgatgta ctggataact tgaaaaaaat
    16201 aaacggtaaa aacgaaaagt tactcggagg gaagacagcc aggacaatcg cagcacagtt
    16261 caggattgcc cgagacacat ccggattgaa atgggaaggt gacccaccgc catttcatga
    16321 aatccgaagt ttatccggtc gcctgcactc agcagaaaaa ggcagtgatt tcactcaggc
    16381 gctccttgga catcgttcat ccagcatgac ggataaatac cgtgacggac gagggaggga
    16441 atggaaagac atttagaatt aatttcgaat gatttcgaaa cgccacttgt aattaattga
    16501 ttataaagga ttaattccta agaggcattt acttcatgaa tgctcctttg catttagcaa
    16561 ctgactgtaa cagctaaaat tagtcgcttt tggcggtgaa tgctgaatta aaacgcagaa
    16621 ttttgtccga tagtggtatc ggtgtaccat tcgcgcagac gaaaattctt aaccttaatc
    16681 tggaatacgc catgaccaca cgcgtgattg ctctcgactt agacggcacc ttattgaccc
    16741 cgaaaaagac cctgcttcct tcatcgatag aagccctggc ccgcgctcgc gaagcaggct
    16801 atcaattaat catcgtcaca ggtcgccatc acgtcgctat tcatcctttt tatcaggcgc
    16861 tggcgctgga tacacctgct atttgctgta atggcaccta tttgtatgat tatcatgcaa
    16921 aaaccgtgct ggaagcggac ccaatgcccg ttaataaagc cctgcaactc attgagatgc
    16981 tgaatgaaca ccacattcac ggtctgatgt atgtcgatga tgcaatggtc tatgagcacc
    17041 cgaccgggca tgtcattcgc acgtctaact gggcgcaaac cctgccgccg gaacagcgtc
    17101 cgactttcac acaagtcgct tctctggctg aaacggcgca acaagttaac gccgtatgga
    17161 agttcgccct gacgcacgat gacctgccgc aattgcagca ttttggtaag catgtcgaac
    17221 atgaactggg actggagtgt gaatggtcct ggcacgatca ggttgatatt gcacgcggcg
    17281 gcaacagcaa aggtaaacgt ttgacgaaat gggttgaggc gcaaggctgg tcgatggaaa
    17341 acgtcgtagc gttcggcgat aactttaatg atatcagtat gctggaggcc gctggtacag
    17401 gcgtggcgat gggcaacgcc gatgacgcgg taaaagcgcg cgccaacatt gtgattggtg
    17461 ataacaccac cgacagcatt gcccagttca tttatagtca cctgatttaa tcaggcggtt
    17521 atcgacacac ttttaatttg cgcgtacagc cacaggccag gtttgatcgc cagttcatcc
    17581 ctggcccacg ggctgatacg cgcccacagc gttttacctc cgacttccag ttccacttcc
    17641 acctggccgt tgtcgtcata actattaaca acttttgccc gcaatacgtt acgaatgctg
    17701 gtttgctgcg gcggttgtaa aaccagagaa acatcggaag cctgaatgcg gatacgtagc
    17761 gcagcttgca gcggttcgtc cagcttattg acccacaaat gctgatcgcc cagcgccagc
    17821 gcggtcatcg cgtaatgcgg atgatgctca agtaccgtca ctttcagaat gctactttgt
    17881 tgctctttcg gcagccacgg attcatcacg ctactacccc agacttcttc cagcgcgcca
    17941 aaggctttca cctgaccgtt ttccagtacc atcactctgt ctgccagatg gaggatctca
    18001 tccagcgaat ggctgacata caacatcgga atgttgattt cccgcgtcag acgttgcaga
    18061 taaggcaaca gttcgcgttt acgcggaata tccagtgacg ccagcggttc atccagcaac
    18121 agcaattccg gagccgtcag caaagcccgc ccaatcgcca cacgctgttt ttcgcctccg
    18181 gacaggctgc ccggtaaacg ctcaagcaac ggttcaatgc ctaaaagcgc caccagctta
    18241 tcgaactgat cgaccatgct tttcgacatg ccgtagcgca gattgccacg cactttgtaa
    18301 tgcgggaaca gccgcgcatc ctgaaaaaca tagccaacgc gacgtttttc tggcgtcagg
    18361 cagatacctt tttcggcatc atttagtacc cgaccattga ggacaatccg ccctttttgc
    18421 gggcgcgtca gtccactgat ggcgttaatc agcgaagttt ttccggcacc ggagacgcca
    18481 aagatagcag tgatgccatt ggcgggcagc gtttcattaa tagtcaggca atggttgccc
    18541 aacgtctggg aaaaattcag ttccagcatg attagcgccc cgcccgttca cggctgattc
    18601 tggccagcca ttctgaaatc aacagggaga tcatcgccag cgcaatagaa ataatgcaca
    18661 gtctcgctgc gccactttcc ccgccggggg tctgaatcag ggtatacatg gcagaaggaa
    18721 tggttcgcgt ttcaccagga atgttcgaca caaaggtgat ggttgcacca aactcaccga
    18781 gagaacgagc aaaagccagt accgtaccaa caataattcc cggtaaggtc agcggtaacg
    18841 tgatagtaaa gaaaacgcgc cagcgcccgg cccccagtgt tcttgcggcc tgttccagtt
    18901 tgacatcaac cccttccagc gccagacgaa ttgcccgcac catcagcgga aacgacatga
    18961 cggcggcagc gagaaccgcg ccgcgccagc taaaggcaaa ggtaatacca aaccagtcat
    19021 acagacgttc accgataaat ccgcgccgtc ccatcgaaac tagtaataag taaccgacga
    19081 ccacgggcgg taacaccagc ggtagatgca gtacgctgtc gagcagagct ttgcccggaa
    19141 acgtgcaacg caccagtaac caagcaaaaa agatcccaaa cggcaggcta aacagcacag
    19201 ccagggaaga aactttcagg cttaataaaa ctgcctgcca ttctggatcg gtcagtatca
    19261 ttacttggtt gtaaatccgt aacgtttaaa gatttccgca gcctgcggtc ccttcagata
    19321 atcataaaat gctttcactg tcgcattgtt atgcccttcc acaacagcaa ccggatattc
    19381 cactttttta tgtgaatctt ccgggaaggt ggcaaccact tttacccctt tgctggcaac
    19441 tgcgtcagaa ccgtaaacaa tgcccagcgg cgcttcattg cgttcgacca acgccagcgc
    19501 gccacgaaca tcttccgccg gagccagttt cggggagagc gtatcccatg cgcccagttt
    19561 ttgcagtgct tcttttgcat aaatgccagc gggaacatgt tccggatcgc caaccgccag
    19621 acgaccgcca ttcagcagcg aagtccagtt agttgtgctg tcgatgatga aatctttctg
    19681 ctcgctggct ttcggtgcta caacgaccag gctattgccg agcagtgtct ggcgcgaagc
    19741 agtatcgatc gcttttttat caaccgcata atccatccat ttctgatcgg cagaaataaa
    19801 cagatccgca ggggcacccg cttcaatctg acgggcgaga gtagatgacg aagcgaaaga
    19861 agaaaccaca tccacgcctt tctctttttt atactgcgta gcaatgtcct gcattgcgtt
    19921 agtcagtgat gcggcggcga acaccgtgat tttcccttca tctgccagtg cattgccagc
    19981 aacagcgaaa gagagtgccg ccccggcaaa caagttcaac catttacgag ccattggtaa
    20041 ccccttaatg taacgttatg taggcgacaa tataacgact aactcggaat tttcccagca
    20101 gttattacta acctttgtga ggtagataag aaaaaatatc ggcaggaaaa gcaggaagtt
    20161 gagaaaaaga aaatgcccga ctaagcgggc attcagggaa tcaatgattt tgtccgggct
    20221 ggtctttttt accaacacca gaaaagatgt tgaatacttc accaagaccg taaatcagac
    20281 ccaggatgat ggccatcacg acaggtacca tgattacggc gaataccaga ctttttaata
    20341 actctaacat ggtcaactcc agatatagtc atgagactat tctaaccgct aagcacagaa
    20401 aagcactccc cttttgtgcg gtcagctttg cgtggcgttc gttttccgtc acaataagac
    20461 ttttgccagg acattgttat gcaggccgaa atccttctca cccttaagct ccaacaaaaa
    20521 ttattcgccg acccgcgccg catttcgcta ctaaaacaca ttgcgctttc cggttccatt
    20581 agccagggag cgaaagatgc cggtatcagc tataaaagcg cctgggatgc cattaacgag
    20641 atgaatcagt taagtgagca tattctggtc gagcgcgcaa caggcggtaa aggtggcgga
    20701 ggcgcagtac tgacccgcta tggtcagcga ctgattcagc tctatgactt actggcgcaa
    20761 atccagcaaa aagcctttga tgtgttaagt gacgatgacg ccctgccgct gaacagcctg
    20821 ctggccgcga tctcacgttt ttcactgcaa accagcgccc gtaaccagtg gttcggtacc
    20881 atcaccgcac gcgatcatga tgacgttcaa cagcatgttg atgtcttact ggctgatgga
    20941 aaaacacgcc tgaaagtcgc aattaccgca caaagcggcg cgcgtctggg gctggatgaa
    21001 ggcaaagaag tgttgatatt gctaaaagcg ccgtgggtag gcattactca ggacgaagcg
    21061 gtcgcgcaaa acgctgacaa ccaattaccg ggtattatta gtcatattga gcgcggcgca
    21121 gagcagtgcg aagtattaat ggcgctaccg gacgggcaaa cactgtgcgc cacagtgccg
    21181 gtaaatgaag cgacttctct tcagcaagga cagaatgtca cggcctactt taatgccgac
    21241 agcgtgatta tcgccacgct gtgctaagcg tgttgacaat ttgttatgaa acacgtatcc
    21301 ctgtcagtaa tcgctgcaca aagtgggata taaaatgtca tcgttgcaaa ttttgcaagg
    21361 cgcgtttcgt cttagcgaca caaaaacgct gcaattgcct cagttaacgt taaacgcggg
    21421 tgatagttgg gcgtttgtcg gttcgaatgg aagcgggaaa tcggccctgg cccgcgcgct
    21481 ggcgggggaa cttccgcttt tgaaaggtga acggcaaagc cagttttccc acatcactcg
    21541 tctctccttc gagcaattgc aaaagctcgt cagcgacgaa tggcagcgga ataacaccga
    21601 tatgctcggc cctggcgaag atgacaccgg gcgcaccacg gctgagatca ttcaggatga
    21661 agttaaggat gcaccgcgtt gtgcgcaact ggcgcagcag ttcggtatta ccgccctcct
    21721 cgaccgacgc tttaaatacc tttccactgg cgagacgcga aaaaccctgc tgtgtcaggc
    21781 gctgatgtcg gagcctgact tgttgattct tgatgagcca ttcgatggcc tggatgttgc
    21841 ctcacgtcag cagctggctg agctactcgc ctcgttacat cagtccggta ttactctggt
    21901 aatggtgctc aatcgcttcg atgagatccc ggagtttgtc cagtttgctg gcgtgttggc
    21961 ggattgcacg ttagcggaaa ctggcgctaa agaggaactg ctccaacaag cactcgtcgc
    22021 gcaactggcg catagtgaac agcttgaagg tgtgcaactg ccggagccgg atgaaccttc
    22081 agcacgtcac gccttacccg ccaaagaacc gcgcattgtg ctgaacaatg gcgtggtttc
    22141 ttataacgat cgccccattc ttaataacct tagctggcag gtgaatccag gtgaacactg
    22201 gcaaattgtc gggccaaatg gcgcgggaaa atcgacgtta ttaagcctga ttactggcga
    22261 tcatccgcaa ggttacagca acgatttgac gcttttcgga cgacgtcgtg gcagcggcga
    22321 aaccatctgg gatatcaaaa agcatatcgg ttacgtcagc agtagtttgc atctggatta
    22381 ccgggtcagc actaccgtgc ggaatgtgat tctttctggc tatttcgatt cgattggcat
    22441 ttatcaggcc gtttcggatc gccagcaaaa actggtgcag cagtggctgg atattctcgg
    22501 cattgataaa cgcacggctg acgctccgtt ccatagtctt tcctggggac agcagcgtct
    22561 ggcgctgatc gtccgcgcgc tggtgaaaca tccgacgttg cttattctcg atgaaccact
    22621 acaggggctt gatccgctga atcgccagct tatctgccgt tttgttgatg tgctgattag
    22681 cgaaggtgaa actcaattgt tgtttgtttc gcaccacgct gaagatgcgc ctgcctgtat
    22741 tacccatcgt cttgagttcg tgccggacgg tggactctat cgctatgtgc tgacaaaaat
    22801 atattgagtc ggtagtgctg accttgccgg aggcggccta agcgccctct ccggccaacg
    22861 gttcgacgca tgcaggcatg aaaccgcgtc ttttttcaga taaaaagcgc aatcattcat
    22921 aaaccctctg ttttataatc acttaatcgc gcataaaaaa cggctaaatt cttgtgtaaa
    22981 cgattccact aatttattcc atgtcacact tttcgcatct ttgttatgct atggttattt
    23041 cataccataa gcctaatgga gcgaattatg agagttctgg ttaccggtgg tagcggttac
    23101 attggaagtc atacctgtgt gcaattactg caaaacggcc atgatgtcat cattcttgat
    23161 aacctctgta acagtaagcg cagcgtactg cctgttatcg agcgtttagg cggcaaacat
    23221 ccaacgtttg ttgaaggcga tattcgtaac gaagcgttga tgaccgagat cctgcacgat
    23281 cacgctatcg acaccgtgat ccacttcgcc gggctgaaag ccgttggcga atcggtacaa
    23341 aaaccgctgg aatattacga caacaatgtc aacggcactc tgcgcctgat tagcgccatg
    23401 cgcgccgcta acgtcaaaaa ctttattttt agctcctccg ccaccgttta tggcgatcag
    23461 cccaaaattc catacgttga aagcttcccg accggcacac cgcaaagccc ttacggcaaa
    23521 agcaagctga tggtggaaca gatcctcacc gatctgcaaa aagcccagcc ggactggagc
    23581 attgccctgc tgcgctactt caacccggtt ggcgcgcatc cgtcgggcga tatgggcgaa
    23641 gatccgcaag gcattccgaa taacctgatg ccatacatcg cccaggttgc tgtaggccgt
    23701 cgcgactcgc tggcgatttt tggtaacgat tatccgaccg aagatggtac tggcgtacgc
    23761 gattacatcc acgtaatgga tctggcggac ggtcacgtcg tggcgatgga aaaactggcg
    23821 aacaagccag gcgtacacat ctacaacctc ggcgctggcg taggcagcag cgtgctggac
    23881 gtggttaatg ccttcagcaa agcctgcggc aaaccggtta attatcattt tgcaccgcgt
    23941 cgcgagggcg accttccggc ctactgggcg gacgccagca aagccgaccg tgaactgaac
    24001 tggcgcgtaa cgcgcacact cgatgaaatg gcgcaggaca cctggcactg gcagtcacgc
    24061 catccacagg gatatcccga ttaaggaacg accatgacgc aatttaatcc cgttgatcat
    24121 ccacatcgcc gctacaaccc gctcaccggg caatggattc tggtttcacc gcaccgcgct
    24181 aagcgcccct ggcagggggc gcaggaaacg ccagccaaac aggtgttacc tgcgcatgat
    24241 ccagattgct tcctctgcgc aggtaatgtg cgggtgacag gcgataaaaa ccccgattac
    24301 accgggactt acgttttcac taatgacttt gcggccttga tgtctgacac gccagatgcg
    24361 ccagaaagca aagatccgct gatgcgttgc cagagcgcgc gcggtaccag ccgggtgatc
    24421 tgcttttcac cggatcacag taaaacgttg ccagaactta gcgttgcggc attgacggaa
    24481 atcgtcaaaa cctggcagga gcaaaccgca gagctgggga aaacgtaccc atgggtgcag
    24541 gtctttgaaa acaaaggcgc ggcgatgggc tgctctaacc cgcatccgca cggacagatt
    24601 tgggcaaata gcttcctgcc taacgaagct gagcgcgaag accgcctgca aaaagaatat
    24661 tttgccgaac agaaatcacc aatgctggtg gattatgttc agcgcgagct ggcagacggt
    24721 agccgtaccg ttgtcgaaac cgagcactgg ttagccgttg tgccttactg ggctgcctgg
    24781 ccgttcgaaa cgctactgct gcccaaagcc cacgttttgc ggatcaccga tttgaccgac
    24841 gcccagcgca gcgatttggc gctggcgttg aaaaagctga ccagtcgtta tgacaacctc
    24901 ttccagtgct ccttccccta ctctatgggc tggcacggcg caccatttaa tggcgaagag
    24961 aatcaacact ggcagctgca cgcgcacttt tatccgcctc tgctgcgctc cgccaccgta
    25021 cgtaaattta tggttggtta tgaaatgctg gcagagaccc agcgagacct gaccgcagaa
    25081 caggcagcag agcgtttgcg cgcagtcagc gatatccatt ttcgcgaatc cggagtgtaa
    25141 gaaatgagtc tgaaagaaaa aacacaatct ctgtttgcca acgcatttgg ctaccctgcc
    25201 actcacacca ttcaggcgcc tggccgcgtg aatttgattg gtgaacacac cgactacaac
    25261 gacggtttcg ttctgccctg cgcgattgat tatcaaaccg tgatcagctg tgcgccacgt
    25321 gatgaccgta aagttcgcgt aatggcagcc gattatgaaa atcagctcga cgagttttcc
    25381 ctcgatgcgc ccattgtcgc gcatgaaaac tatcaatggg cgaactacgt tcgtggcgtg
    25441 gtgaaacatc tgcaactgcg taacaacagc ttcggcggcg tggacatggt gatcagcggc
    25501 aatgtgccgc agggtgccgg gttaagttct tccgcctcac tcgaagtggc ggtcggaacc
    25561 gtattgcagc agctttatca tctgccgctg gacggcgcac aaatcgcgct taacggtcag
    25621 gaagcagaaa accagtttgt tggctgtaac tgcgggatca tggatcagct aatttccgcg
    25681 ctcggcaaga aagatcatgc cttgctgatc gattgccgtt cactggggac taaagcagtt
    25741 tccatgccga aaggtgtggc tgtcgtcatc atcaacagta acttcaaacg taccctggtt
    25801 ggcagcgaat acaacacccg tcgtgaacag tgcgaaaccg gtgcgcgttt cttccagcag
    25861 ccagctctgc gcgatgtcac cattgaagag ttcaacgctg ttgcacatga gctggaccca
    25921 atcgtggcga aacgcgtgcg tcatatcctg actgaaaacg cccgcaccgt tgaagctgcc
    25981 agcgcgctgg agcaaggcga cctgaaacgt atgggcgagt tgatggcgga gtctcatgcc
    26041 tctatgcgcg atgatttcga aatcaccgtg ccgcaaattg acactctggt agaaatcgtc
    26101 aaagctgtga ttggcgacaa aggtggcgta cgcatgaccg gcggcggatt tggcggctgt
    26161 atcgtcgcgc tgatcccgga agagctggtg cctgccgtac agcaagctgt cgctgaacaa
    26221 tatgaagcaa aaacaggtat taaagagact ttttacgttt gtaaaccatc acaaggagca
    26281 ggacagtgct gaacgaaact cccgcactgg cacccgatgg tcagccgtac cgactgttaa
    26341 ctttgcgtaa caacgcaggg atggtagtca cgctgatgga ctggggtgcg actttacttt
    26401 cagcccgtat tccgctttcc gatggcagcg tccgcgaggc tctgctcggc tgtgccagcc
    26461 cggaatgcta tcaggatcag gccgcgtttc tgggggcctc tattggtcgt tatgccaacc
    26521 gcatcgccaa tagccgttat acctttgacg gtgaaaccgt gacgctttcg ccaagtcagg
    26581 gcgttaacca gctgcacggc ggcccggaag ggttcgacaa acgtcgctgg cagattgtga
    26641 accagaacga tcgtcaggtg ctgtttgccc tgagttcaga tgatggcgat cagagcttcc
    26701 cgggtaatct cggcgcaacg gtgcaatatc gtctgaccga cgataaccgt atctccatta
    26761 cttatcgcgc cacagttgat aaaccttgcc cggtgaatat gactaatcac gtctatttca
    26821 atcttgacgg cgagcagtct gacgtgcgca atcacaagtt gcagattctg gcggacgaat
    26881 atctgccggt tgatgaaggc ggcattccgc acgacggcct gaaatctgtc gccggaacgt
    26941 cttttgattt ccgcagcgcc caaatcatcg ccagtgagtt tcttgccgac gacgatcagc
    27001 gcaaagtgaa aggttacgat cacgcattct tgttacaggc caaaggcgat ggcaaaaaag
    27061 tggcggcgca tgtctggtca gcagatgaaa aattgcagct gaaggtctac accaccgccc
    27121 ccgctcttca attctactcc ggcaacttcc tcggcggcac accgtcgcgg ggaaccgaac
    27181 cttacgccga ctggcaaggg ctggcgttgg aaagcgagtt tctgccggac agcccgaacc
    27241 accctgaatg gccgcaaccg gactgcttcc tgcgtcctgg cgaagagtat tccagcctga
    27301 cggaatatca gtttattgct gagtaatgtt aagccctcgt catgagggct ttatcttcat
    27361 attgttcaaa tcaccagcaa acaccgacat atttgcaact caatattcac aacaacctta
    27421 cactgcgcca ctattttcgc tatggttatg cgtaagcatt gctgttgctt cgtcacggca
    27481 atataatgag aattattatc attaaaagat gatttgagga gtaagtatat ggctgtaact
    27541 aagctggttc tggttcgtca tggcgaaagt cagtggaaca aagaaaaccg tttcaccggt
    27601 tggtacgacg tggatctgtc tgagaaaggc gtaagcgaag caaaagcagc aggtaagctg
    27661 ctgaaagagg aaggttacag ctttgacttt gcttacactt ctgtgctgaa acgcgctatc
    27721 cataccctgt ggaatgtgct ggacgaactg gatcaggcat ggctgcccgt tgagaaatcc
    27781 tggaaactga acgaacgtca ctacggtgcg ttgcagggtc tgaacaaagc ggaaactgct
    27841 gaaaagtatg gcgacgagca ggtgaaacag tggcgtcgtg gttttgcagt gactccgccg
    27901 gaactgacta aagatgatga gcgttatccg ggtcacgatc cccgttacgc gaaactgagc
    27961 gagaaagaac tgccgctgac ggaaagcctg gcgctgacca ttgaccgcgt gatcccttac
    28021 tggaatgaaa ctattctacc gcgtatgaag agcggtgagc gcgtgctcat cgctgcacac
    28081 ggtaactctt tacgtgcgct ggtgaaatat cttgataaca tgagtgaaga agagattctt
    28141 gagctgaata tcccgaccgg cgtgccgctg gtgtatgagt tcgacgagaa tttcaaaccg
    28201 ctgaaacgct attatctggg taatgctgac gagatcgcag cgaaagcagc ggcggttgct
    28261 aaccagggta aagcgaagta aacgtcattc gtttaaaaat gagaaagccg actgcaagtg
    28321 agtcggcttt tttgttgcta acaatggagc acattgcctg atgcgacgct gcgcgtctta
    28381 tcaggcctgt ggtgattcat cggatacgcc actctgacgg cacatccgac aattaaacct
    28441 tacccgcgac gcgcttttac tgcattcgcc agttgacgta acagagcatc ggtatcttcc
    28501 cagccgatgc aggcatcggt gatgctctta ccgtaggcca gcggctcccc gctctcgagg
    28561 ctctgattgc cttccaccag atggctttcc accatcacgc caataatggc cttttcgcca
    28621 ccggcaatct gctggcaaac gtcagcacaa acatccatca gctttttgaa ttgtttggac
    28681 gagttagcat ggctgaaatc gatcatcacc tgtgctggca ggcctgcttt gttcagccct
    28741 tctttcactt cagcaacgtg cttcgcgctg tagttaggct ctttaccgcc gcgcagaatg
    28801 atatggcaat caccgttacc gctggtattc acaatcgccg aatgccccca tttcgttacg
    28861 gacaggaagc agtgcggcgc accggcggca ttaatggcat cgatagccac tttaatcgta
    28921 ccgtcggtgc catttttgaa gccgaccgga caagaaagcc ctgatgccag ttcgcggtgc
    28981 acctgcgatt cggtggtacg tgcgccaatt gcgccccagc tcatcaggtc agcgagatat
    29041 tgtggggtga tcatatccag aaattcaccc gccgctggca gaccgctgtc gttaatatca
    29101 agcagcaatt tacgggctat acgcagaccg tcgttgatct ggaagctgtt atccatatgc
    29161 ggatcgttaa tcagcccttt ccagcccacc gtggtacgcg gcttttcaaa atagacgcgc
    29221 attacgattt ctagctcatc tttcagctct tcacgcagcg ccagcaagcg agtggcatac
    29281 tctttagccg cgacaggatc atgaattgag cacgggccaa tcaccaccaa caggcgatca
    29341 tcattacctt tcaggatttt atggatcgct tttcgggcat gggcaaccgt attcgcggca
    29401 ttttcagtag cggggaattt ttccagcaat gcgacaggag gaagtaactc tttgatttct
    29461 ttgatgcgta aatcgtcgtt ctgataattc atgtctgttc cagtgttgcc atacttatct
    29521 tagtaaatgc aatacttcca atctatatct tccgtcagaa tgtgtaaacg gggttttaca
    29581 ctatgaacag attaatcctg gaattagcaa gaaaaacgcc agattgtcgc gaaaaacgag
    29641 atctctccta caatttctaa ctgtaactcc tttgtttgtt aattatttca agattctctg
    29701 ctgcgtttca taacctggct gaaatcttaa accaatgcct tatattcacc tgcaaatgca
    29761 ctgttggaag aggttatccg acataacgac cataacagga gcatcctatg aaaatgacaa
    29821 aactggccac actatttctg actgccactc taagccttgc cagcggtgcc gcactggctg
    29881 ccgatagcgg agcgcaaact aataacggcc aggcaaacgc cgcaactgat gcgggccagg
    29941 tagcccctga cgcccgtgaa aatgtcgcgc caaataacgt cgacaataac ggggtaaata
    30001 ccggttctgg tggcacaatg ctgcattcga atggttcttc aatgaacaat gacggaatga
    30061 ccaaagatga agagcacaag aacaccatgt gcaaagatgg tcgctgtccg gatatcaata
    30121 aaaaggtaca aactggtgat ggcatcaata atgatgtcga taccaaaact gacggtacca
    30181 cgcagtaacc ctgcaaaata gccaataatg ggagagcgga gtctctccct tttaattttt
    30241 cccttctaaa agcagtatga tgtcataaag ttaagtgaga ataattaagg atgactcgtc
    30301 atgacgcact cacactcaca cacgtcctca cacctgccag aagataataa tgctcgtcgc
    30361 ttgttgtatg ctttcggcgt gactgccggg tttatgctgg tagaagtcat tggtggtttt
    30421 ctttctggtt ctctggcttt gctggccgat gcgggtcata tgttgaccga tactgctgcc
    30481 ctgctttttg ccctactcgc cgtgcaattt tcacgtcgtc ctcccaccat tcgccacact
    30541 ttcggttggc taagattgac cacgctcgcg gcgtttgtga atgccatcgc cctggtagtg
    30601 attaccattt tgattgtctg ggaggcgata gaacgcttcc gcacaccgcg tccggtcgag
    30661 ggcggcatga tgatggcaat tgccgtggct gggttgctgg caaatatact ttctttctgg
    30721 ttactccatc acggcagcga agagaaaaac ctcaacgtac gagcagcggc actgcatgtg
    30781 ctcggggacc tgctgggttc ggttggggct attattgccg cgttgattat tatctggacc
    30841 ggctggacac ctgctgaccc cattctctcg atactggtgt cgcttctggt tctgcgtagc
    30901 gcgtggcgac tgttgaaaga tagcgtgaat gaattacttg aaggtgcacc ggtatcgctg
    30961 gatatcgctg aactgaagcg tcgtatgtgc cgggaaatcc cggaagtccg caatgtgcac
    31021 catgtacatg tatggatggt aggcgagaag ccggtgatga cgctgcatgt gcaggtgatc
    31081 ccgccacacg atcacgatgc cttgttggat cagatccaac actacctgat ggatcactat
    31141 cagattgagc acgccatcat tcagatggaa tatcaacctt gtcatgggcc agactgccac
    31201 ctgaatgaag gggtgtctgg ccattcacat catcaccatt aatgggacag cgcgcgtgag
    31261 cctctttcac gtgcgctgtt gatccacatc cgactgccgt tgagcgcaat aaaggtcagg
    31321 atgatgtact ccagagacat ggcgtaaacg ccctgaagtg caaaaataac gacgctaatc
    31381 acgttaataa tcacccacaa cagccagttt tccacatact tacgcgtcat cagaatcatt
    31441 gccacgatag ataacaccat catgcatgaa tcccagaacg ggaaagcgtc cggttgcagt
    31501 tcaggcatca caacctgtaa tcctaatgct tgcatgatca tgactgccac gcgggtcaaa
    31561 aatgcaaaca ccggattgat aaataccgtc atcagaccaa tcgaaacaac gcaaaccgcc
    31621 aaccagctga gcgccttcgg caatggtaac cagcgaattt tcaactccgc ctcgttctga
    31681 ctggtttgtc gcgaccacgc ataccaaccg taaatattcg cggcaaagaa aaacacctgt
    31741 aatagcaggc tggcatacag ctgaatctga aagaaaataa tgccaaacaa ggtgacgttg
    31801 atcaggccaa agaagtagtt gctgatcttc tccagactgg caaggccaat acacagcaac
    31861 ccggcgatcg tgcctaccgc ttcgatccat gagagatcat aaccgcctgc ccctattggt
    31921 atatgtacca ggatattctg cacactaaaa aaatccatct ttcccccaaa gcgtaacgtt
    31981 acgccttatt attcgttatc cacgtagtgt agccgcaaaa tccagcatac gattgagcgg
    32041 caccagcgcc ctctctcgca gcctttcatc aacatgaacc tcgtgattgc ttccttcctg
    32101 ttctaatgcc tctgcgatgg actgaaggcc attcatggcc atccacggac aatgcgcgca
    32161 gctgcggcag gttgcaccct cacctgcggt tggtgcttcc agtaactctt tatctggcac
    32221 cgcctgctgc attttgtaga aaataccccg atcggttgcc acaataagcc tctgatgtgg
    32281 caatgttttc gcagcagcga tcagttgact ggtggaaccg accgcatccg ccatatcgac
    32341 aatagcttgt ggggattctg gatgcaccag tatggcagca tccgggtatt cttcttgcaa
    32401 gcgggttaac gcctgagtct taaattcatc atgcacaata caggcaccct gccagcataa
    32461 aatgtctcca cccgtctgtt tttgcacgta acgccccaga tgtttgtcgg gtgcccagat
    32521 gattttttca cccaaactat ccagatgatc aataagttcg acggcaatgc ttgaagttac
    32581 cacccaatct gcccgcgcgt tttaccgcag cagaagtgtt ggcgtagacg acgacagtat
    32641 gatcgggatg ggcatcgcaa aatgcgttaa attcttcaac agggcagccg agatccagtg
    32701 aacattcagc ctgaagtgtc ggcatcagaa ttgttttttc cggactgaga attttggcgg
    32761 tttctcccat aaatctcacc ccagcgacta acaacgtaga agcgggatgc ctcgcaccga
    32821 agcgcgccat ttccagagaa tcagaaatac agccaccggt ttcttctgcc agttgttgaa
    32881 tttcgggatc ggtatagtaa tgggcagcca tcaccgcatt acgttctttt agtagatgtt
    32941 ttatcttctc gcggtaatac gctttttcat caatgcttaa cggcgtcggc ttcgggggga
    33001 aaggataaat cgccgtgtct ggatcaaaca ttacgctcat cttaccatct cgttttacag
    33061 gcttaacgtt aaaaccgaca ttagcgtaat attcgctgtt atcggtgtaa tttattttat
    33121 atgctaaaca agatagtcga atggtgggga aaagtcactc gaattacgcc taattccacc
    33181 gacgtagagt tgcttgcaca gtaagctctg acgatgtcat caggtttaca aagtgaaatt
    33241 gaggatgcct gaatagcaaa aaagcgcctt tagggcgctt ttttacattg gtgggtcgtg
    33301 caggatgact cgcttcgctc gcccttcggg ccgtcgccgc gagcggctcc gttgtttcgc
    33361 tgcgctcaac tcgaacctgc gaccaattga ttaaaagtca attgctctac caactgagct
    33421 aacgacccct tgcgggatta tgctgcttta atcattcagg atggtgggtc gtgcaggatt
    33481 cgaacctgcg accaattgat taaaagtcaa ctgctctacc aactgagcta acgacccata
    33541 cgggtgttac ctgaaagatt tctactcggg gccaatcttt aagattggtg ggtcgtgcag
    33601 gatgactcgc ttcgctcgcc ctacgggccg ttgctggcgc aacgttatcc ttcacgctta
    33661 acatctgagt ttgatgttaa aattggtggg tcgtgcagga ttcgaacctg cgaccaattg
    33721 attaaaagtc aactgctcta ccaactgagc taacgacccg agtggtgggt gatgacggga
    33781 tcgaaccgcc gaccccctcc ttgtaaggga ggtgctctcc cagctgagct aatcacccga
    33841 tattgcgctg gatactacaa actacttcca ccgaacccac cgtaattagt ggtgggtcgt
    33901 gcaggattcg aacctgcgac caattgatta aaagtcaact gctctaccaa ctgagctaac
    33961 gacccggtgg tgggtgatga cgggatcgaa ccgccgaccc cctccttgta agggaggtgc
    34021 tctcccagct gagctaatca cccaatacta cgctggatac tacaactaac tatgttagtg
    34081 gtgggtcgtg caggatgact cgacttcgtc tcgcccttcg ggccgttgct gatgcaacgt
    34141 tatccttcac gttttactac cgcttccacc ttagcgattg gtgggtcgtg caggattcga
    34201 acctgcgacc aattgattaa aagtcaactg ctctaccaac tgagctaacg acccactttt
    34261 tcgttgcttt cggtttgttt gatatcccgt ggcaacggcg gcatatatta ctgatttcag
    34321 acttgagcgc aacaaaaatt tcgatgcaga tcactcaact gcttatgatt cgcacgacac
    34381 gaccagaaat aatgcgactt ctggtcgtgt gttatgcatt acatcgcgtt cagacgtttt
    34441 tgtgcctgtt tagcgccatc agtaccaggg tatttactga taacctgctg gtatacggct
    34501 ttcgcttttg cggtgtcacc tttgtcctgc atgatgacgc cgactttaaa catcgcatca
    34561 gcagcctttg gtgacttcgg atagtttttc actaccgaag caaaatagta cgccgcatca
    34621 tcttttttac ccttgttgta gtttaactga cccagccaat aattggcgtt tggcaggtaa
    34681 gttgaatcag ggtaattttt gatgaaattc tgaaatgcca ccattgcgtc atcctggcgg
    34741 gatttatcct gcaccagcgc aatagctgca ttgtaatccg tgtttgcatc gccgcttttc
    34801 accggcgcgc cagcattcgc agtaccagca tcagctgtcg gcgtcgttga tgccgccgca
    34861 ccgctttgat cgctgctggt tgattgcgcc gctgcaccac cgctgctgag gctgtcgatc
    34921 tgcaacagga tctgcttttg ccgctccacg acctgattca gttgatactg attttcctga
    34981 atctgaccac gcagggaatc aatatcggat tgattatcag agagttgttg ctggagttgg
    35041 gttaaaagct ggctgtgagc attagaaata cgctcaagtt gagtgacgcg gtcttcgacc
    35101 gagcctgagc cgacactact gattggtgcc tgagcaaaag cggcccaggg ggccgctata
    35161 ccaaccagta acgacagact caatagttga tgtctgaagt tactgctcat gcaattctct
    35221 tagtaaacca gtaccgcacg acggtttttg gagtatgccg cttcgtcatg acccagtact
    35281 gcaggttttt ctttaccgta agaaacgatg gagatctggt cagcagaaac gcctttaccc
    35341 tgcaggtaca tcttaacggc gttcgcacga cgttcaccca gggagatgtt gtattccgga
    35401 gtaccacgtt cgtccgcgtg accttctacg gtgactttgt aagacgggtt gctacgcagg
    35461 aagtttgcgt gtgcatccag catttgagcg aagtcagaac ggatatcgta cttgtccaga
    35521 tcgaagtaaa cgatgttgtt ctgctgcagc tgttgcattt gcagacgagc ctgctcttcg
    35581 gaagacatgt tgccattgcc gccgttcgca tccataccag tgccggcacc cagcatgcct
    35641 tcgctgccgt cattgctggc gttcttgttg gaagaacatg ccgcaattgc cataacaggc
    35701 agagcaatca tcagcccttt cagcactttg ttcagttgca tttcaatgat tcctttacta
    35761 ttcaattaat tattatcaca gatacggcga ccaggcaggg aatttgacct gtccatcagt
    35821 tgccggaaga cgcgctttga aacgcccatc tgtagaaacc aaattcagca cggatcccat
    35881 cccctgagaa gagctgtaga ttaccatagt gccgttaggt gccagacttg gcgtttcatc
    35941 caggaacgtg gacgacagaa cttgtacgcc tcccgttgcc agatcttgtt tggcaatgtg
    36001 ctgctgccca ccattggagc tgaccattac cataaattta ccgtcgctgc taacatccgc
    36061 atcctggttc tgcgaacctt cccaggtaat acgttgtggc gcaccgccgt tgatattcac
    36121 tttataaacc tgcggacgac cggcctggtc agaagtaaat gccaggttct ggctgtccgg
    36181 gaaccaggtc ggttcggtat tgttactgcg accatcagtc acctggcgga tctgaccaga
    36241 agccaaatcc attacgtaca ggttcagact accggttttc gacaaggcga atgccagttt
    36301 gctgccgtct ggcgagaatg caggtgcacc gttgtgacgc gggaatgaag ccacctgacg
    36361 tacagcgcca tttgccagcg tctgaataac cagcgcggaa cgaccgcttt cgaaggtcac
    36421 ataagccagt ttagaaccgt ctggtgacca cgcaggagac atcagcggct gcggtgaacg
    36481 gtgaacgaca aactggttgt aaccgtcata gtcagatacg cgcagttcat acgggaactg
    36541 accgccgttg gtctgaacaa cgtaggcaat acgggtacgg aacgcacctt taatgccggt
    36601 cagtttttca aacacttcat cactggcggt atgaccagca taacgcagcc actgcttgtt
    36661 cactttgtac gagttctgag caagtacagt acccggtgcg ccgccagtgt caacaagttg
    36721 ataagcaaca ttgtaagaac catccggatt cggagtgacc tgaccgacaa ctacagcgtc
    36781 aatgcccagt gcggaccatg cacctggttg tacttcctgc gcactacccg gctgctgtgg
    36841 cagacgagcg cgatctaacg gattaaattt accgctgtta cgcaagtcag cagcaacgat
    36901 gccgccaata tcttcaggtg ccgcaccagg ccccgcccac tggaaaggaa caacaccaat
    36961 aggacgaccg gaatctacac cgctgtcgat cacaatgcgg acttcagcat gcagaactga
    37021 tgcccacagt atgagaaaac caaatgctac tcgtaatgcc tgcttcatca tatctccctt
    37081 atctggaccg atggcccacg ataatttagc agaatgttaa caaactaaaa tacacaaaac
    37141 taccagaacc ccgtggcaac cggtgcctga tgttgaccgt ccgaacagtc aacatcgcga
    37201 ttacggtttg aagtccaatg gcgcgttttt gaacacttca tatactgcct ggcttggtgg
    37261 tttcgggatc ttcgcaagtt tagctgctgc caacgcagcc tgacaaagtg cgggatcgcc
    37321 accttcaggt ttgatatcca gtaacatacc atcgggtgcc agttttatgc gcagcgtaca
    37381 ggttttgcct gcataggacg atgcgtcata gaacttactt tcgatagcag atttaatctg
    37441 cccggcatag ttattgatat cggcccctga tgcgccattg tttttagtat taccactccc
    37501 ggcaggcgaa gcattgttcc ctttcgcccc ccccgttttc ggtgcattct taccagagct
    37561 tagctcaccg aaaatatcat ctgcctctgc ggcagctttt gctgcagcgg ctttttcagc
    37621 tgctactttt gccgctgccg cttttttgtc tgcggcggct ttttctgccg ctgctttctt
    37681 atcagctgct gccttatcag cagccgcttt ttctgctgct tttttgtcgg ctgcagcctt
    37741 ttcagcagcc gctttcttct cagcttctgc cttggctttt tcagcaactt cagttgccgc
    37801 tttctttctt gcttcagctg cagctgcttc tgccgcttcc gctttcttct tcagtgccgc
    37861 agcggctgcc tcggcttttt tctgcgcttc ggctgcggct ttggcggctt ctgcttctgc
    37921 ttttttcttc gcgtctgcag ccgctttctt cgctgcttct tccgcagctt tagcatctgc
    37981 ttcggccttc gctttagcat ctgccgccgc tttcgctgcc gcctcttcag cttgcttctg
    38041 ctttaactcg gcctgttttg cggcttcttc agcctgcttt ttctgctcct gagccgctaa
    38101 ccgctctttc tcaagttgct tcaggcgttc ctgttcagcc gcttgtttct cacgcagttc
    38161 ttcagcagcc tgctgttcct tcatcttgcg ctgttcatca gaacgcttcg cgcttgattc
    38221 ctggctttgc atgcgtttgt actgctcaac taccgcacct gaatcaacca tgacagcgtc
    38281 gatggacgaa ccaccgccgc ctccggctga agcttctata ttctcatcga acgaactcca
    38341 gatcagcgcc gcaaataaga tgacatgcag cactgctgaa ataattatcg cccgcttgag
    38401 cttgtcgttt tgttcggttg cctttgacac tctcggtttc caaaaactgt tcgcctgtta
    38461 cccgctctct ttcaagcaag ggaaatgcag atgtttagat aggctgcgtc attaaaccaa
    38521 ccgatttcac acccgcacta tgtaacaagt tcagtgcttt aattatttca tcgtaaggca
    38581 catcttttgc gccaccgatc agaaagaccg ttttcgggtt ggccttgaaa cggctggaca
    38641 cttccgccac cacctgctct ggtggtaaac gctccaggcg atctttctca accaccacgg
    38701 tgtactgacc aataccagac acttcaacaa tcactggcgg attatcgtta ctgctcaccg
    38761 cctgtgattc agtagcgtct ggcagatcga cctccacgct ctgggtgatg atgggcgctg
    38821 tcgccataaa gatcagcaac agcaccagca gtacgtccag caacggtaca atgttgattt
    38881 cggacttgag atcgcgacga cctcgtccac gcgctctggc catggcttac cccttgttgc
    38941 tctcgctaac ggtaaacgcc tggcggtgca gaatcgcggt aaactcttcc ataaagttgt
    39001 cgtaattcag ttccagtttg tttacgcgct ggttgagacg gttataagcc attaccgccg
    39061 gaattgcggc gaacagacca attgccgtcg caatcaacgc ttctgcgata ccgggcgcaa
    39121 ccatttgcag tgttgcttgt tttaccgccc cgagggcgat aaaggcgtgc atgatccccc
    39181 agaccgtacc aaacagacca atatacgggc tgatggagcc aaccgtaccg aggaacggaa
    39241 tgtgcgtttc cagattttca agttcacggt tcatggagat acgcatagca cgcgacgccc
    39301 cttccactac ggcttccggc gcatggctat tggcacgatg caggcgcaca aactctttga
    39361 acccgctgta aaagatttgt tccgaaccag tcagattatc ccgtttcccc tgactctctt
    39421 gatagaggcg agagagttcg attccagacc agaatttatc ttcaaacgct tcggcttcac
    39481 gcgccgctgc gttaagaata cgggttcgct ggataataat ggcccaggat gcgattgaaa
    39541 aaccaatcaa aatcaacatg ataagtttaa ccagaaggct agccttcagg aacaaatcaa
    39601 ggatattcat gtcagtcact gcttaaactc cgcgacaata gacttgggaa gcgcacgagg
    39661 cttcattttg agtgggtcaa cgcaaacaac cagaacctct gcttcattca gcaaagtatt
    39721 ctcggcgttg acaatacgtt gcgtgaaaac caaagaggtg ccacgcattg atgttatttc
    39781 agtctgtatt tcgagcatat cgtcgagccg cgcaggtgcg taatattcca ccgtcatttt
    39841 acgtaccaca aaggcaacgc gttcagccat cagcgcctgc tgactgaagt gatgatgacg
    39901 cagcatctct gtgcgtgctc tttcataaaa agcgacgtaa ctagcgtggt acaccacacc
    39961 accggcatcg gtatcttcat agtagacgcg aaccggccat cgaaacagcg ttgtattcac
    40021 tttacatccc ggtaatgcaa caaaagttag agcttttaaa cgctgctact atacgcgcgc
    40081 gattgaggtt tgggaatgag ggcaagttaa gggagcgtaa aaatttatgg gcctggagcg
    40141 gcccataatt ttttaaagag aattctgatt taaaagaaga agaaaatcag cccgacaatg
    40201 agaacaatat cggcaagcaa tgggcaaaaa atcccttgcc aaagaacctt ctgcggacga
    40261 aagcccacgc cgtgaatcac accagcacag acggcccaca tcagcaataa accatgccag
    40321 atttccagtt cactggtctt cgcggcaaaa cgagatgggt cccaaaacat acatcctgct
    40381 aacagaagcg ccatcacgaa ggaaagcgcc cgcagggggc gcttgtccat taccgcatac
    40441 aaggtcgcga taatcttact catcagatgt cttcttgacc ggctttgcct gattcgacgt
    40501 gttcaagcgc cagcgcggtg attaccccaa acgaacaggc aagaagcgtt cccagaatcc
    40561 atgcgaaata ccacattttt agctccttac ttagtacaga gagtgggtgt tacgttcaat
    40621 atcttctttg gtgatacgac cgaacatttt ccagtaacac caggcggtgt agagcagaat
    40681 gatcggtacc agaaccaccg caacccaggt catgacgtta agcgtcagct ggctggaagt
    40741 tgcatcccac attgtcagac ttgcgttcat catggtgctg gacggcatca caaacgggaa
    40801 cattgcgata cctgctgtca ggatgatgca ggccagcgtc agggaggaga acacaaacgc
    40861 ccacgcggct ttatccatac gtgcagtcag gatggtcagc agcggcagaa ccacacccag
    40921 tgccggaata gcccacagaa ttggcgtgtt gttgaagtta accagccatg cgccagcttc
    40981 acgaaccact tctttattca gtgggttaga ggctgcgtaa tggtccattg tcgatttcac
    41041 gacataacca tcgataccgt acatcaccca tacgccagcc agtgcgaaac agaccagtgt
    41101 caccagcgca gccacctgag ccgttgcacg ggtacgcagg tgcagttcgc ccacggtacg
    41161 catttgcaga taggttgcgc cctgagtaat gatcatccct acgctcacca cgcctgccag
    41221 caggccaaac gggttaagca actggaagaa gttaccggtg tagtacagac gcagatattc
    41281 atcaacgttg aacggtacgc cctgcaacag gttaccgaac gctacaccaa ttaccagcgg
    41341 cggaacgaag ctaccaatga agatgcccca gtcccacatg ttacgccagc gggtttcttc
    41401 aatcttggag cggtagtcaa aaccgaccgg acggaagaac aaagacgcca gcacgaggat
    41461 catcgccaca tagaagccgg agaacgcagc ggcatagacc atcggccagg cagcaaagag
    41521 tgcgccgccc gcggtgatca gccaaacctg gttaccgtcc cagtgtggtg caatggagtt
    41581 aatcataatt cgacgctcgg tgtcgttacg accgaggaaa cgggtgagca tgcccacccc
    41641 catgtcgaaa ccgtcagtga ctgcaaaacc aatcagcaga acgccaacca gcagccacca
    41701 gataaaacgc aatacttcat aatcgatcat ttgacgactc ctgtcttagc gtgccggctg
    41761 agtagtcgtg gaagactgct caaagtgata gcgaccggtt ttcaggctgc ttgggccgag
    41821 gcgtgcaaac ttgaacatta agaacaattc tgccaccagg aacagggtat acaggccgca
    41881 aatcagcacc attgagaaga tgagatcgcc tgcggtcagt gacgagttcg ccacagctgt
    41941 cggcagcact tcaccgatag cccacggttg gcggccatat tcagccacga accagcccgc
    42001 ttctacagca atccacggca gcggaatacc gtacagcgcg gcgcgcagaa gccatttttt
    42061 ctcgccaatg cggttgcgga tgacactcca gaaagagagc gcgatgattg ccagaagcag
    42121 gaagccacac gccaccatga tacggaacgc aaagtacagc ggcgctacac gcgggatgga
    42181 gtctttggtt gcctgttgaa tctgcgcttc agtcgcatca gccacgtttg gcgtatagcg
    42241 tttcagcagc agaccgtaac cgaggtcttt cttcatgcta ttgaactggt cacgaaccgc
    42301 ctggtcggta gaaccagaac gcagttgttc gagcagagag tacgccttca tcccgttacg
    42361 aatgcgttct tcatgctgca ccatcagctc tttcaggccg ataaccgggg tatccacgga
    42421 acgcgttgca atgatgccca gtgcgtaagg gatctgaatc gcaaatttgt tcgtctcctc
    42481 ttcctgatca ggaatgccga acagagtaaa ggcagcaggc gcaggttgcg tttcccactc
    42541 ggcttcaata gcagccagtt tggttttctg cacgtcgccc atttcgtagc cggattcatc
    42601 acccagaaca ataacagaca gaacagcagc cataccgaag ctggcagcga tagcaaagga
    42661 gcgtttagcg aaggcgaagt cacgaccttt cagcatatac catgcgctga taccgaggat
    42721 gaacatcgcg ccagtcacat aaccagacgc tacagtgtga acgaatttca cctgagcaac
    42781 cgggttaagc accagctcgg agaagctcac catctccata cgcatagttt caaagttgaa
    42841 atcggacgcg attgggtttt gcatccagcc gttcgcaacc agaatccaca gtgcggacag
    42901 gtttgaaccg agcgccacca gccaggtgac acacatatgc tgaactttac ccagacgatc
    42961 ccaaccgaag aagaacagac ctacaaaggt ggattcgagg aagaaggcca tcagaccttc
    43021 gattgccagc ggcgcaccga agatatcccc tacatagtgg gaatagtaag accagttagt
    43081 cccgaactgg aactccatgg tcagaccggt agccacaccc agagcgaagt tgataccaaa
    43141 caacttgccc cagaacttgg tcatatcttt ataaatctgt ttgccggaga ggacgtagac
    43201 cgtttccata atggccagca ggaacgccat accgagcgtc agtggcacaa aaaggaagtg
    43261 gtacatcgcg gtcaaggcaa actgtaagcg cgacagttcg actatatcta acatcatgac
    43321 tccttgctca tcgcatgaag actccgagag tgaaccccgt tagaaagggt cacacgcatg
    43381 ccccaataga aatttgtttg aacactttca tcataccatg tgaatgcaca caaaaacggc
    43441 gtaaagaaag gttgcaaaca tgttaataaa aactcaaatt gatcccacgt atatattacg
    43501 ctgcaaaatc cttacaataa acaggttttt gttgaagcaa atttgcattt ttcgacggtg
    43561 atcaatttat agctaaattg ccgtctttca gccaatttga tcgagaacaa tttatctctt
    43621 tttgatgccc atttccaaga cttatacatt gataaatatc aatttctgca aattatgtta
    43681 atcatgtttc aataaggtaa ctttagtggc atttatgttt aaaatgtgtg acttataagg
    43741 ctgaaattag tttcggttgg caattaaaga taaaaagaga cgaagcaaaa acagcacggt
    43801 tgaccttaat tctttttttg gtcactggct aatacgacgc agagtttcag gattattaat
    43861 aaaggcataa atccaccccg ccaatattaa catttaatta acttataatt atattataat
    43921 taactcaccc agggttatta ttttgttaaa aataaagcca catatacgtg gcttgagagt
    43981 gaagataaac gaaaaattac ctgatgcgct acgcttgcca gtgtctacat catctctgca
    44041 atatattgaa tttgcctgct tttgtagacc gaataaagcg ttcatgccgt atccagcatg
    44101 aacaaagcgc cctttgtcaa caatctggcc gcgcatatgt ggcttcggtt tgattgctat
    44161 tcaggcaagc cggtaactga acgtccgtga ctggccgggt aaaaaaggcc ccgatagatt
    44221 tgaaccttga ttttcctcgg tggtaatgtg ttcatccatc atcgtttctg agcaaaaaat
    44281 cacctcgcga ctgaaagcaa cagtcgcatc acaggttgct gattcagccg gattaaacag
    44341 ccgtaaaatc acttcttgtc ggtcttcagc tttcttaagt gcgcttatca ggcatcccac
    44401 tgggggcatt ttcaacaaac tataactttc cggcacgttg aatccggctt tgttgagctt
    44461 catcgcatcc catgggattt tgttgtaaca ctgtactgga gtcagccatg ctcgcgcctg
    44521 ctgagctaca ccagcggcgg ttggcgtacc ggtataactc aataaactta ggcgacaaga
    44581 aagcagacca cgtagttgtg agtccgggac tggcatttta attcccgaag gccgcccagg
    44641 ccttaaaagc agatcttctt tccccagtaa gcccacgccg cgcagcaacg taatggcaaa
    44701 ggaatcgggt aaataaccta ttttcatcgg ctcgccaaac gcgaggcagt cacgcattcc
    44761 gtacatcaga ttacggacga tggattccgc agaaacaatc gtggtatcgg tctgggtata
    44821 ccaggggccg ataatcaact tgccggcttc taccagtttc ttcacgcggt ctttgttttc
    44881 cggtttcacc gcgaaataat cttcgaggat cgccgtttgc ccgtcgagta cgtaatattt
    44941 gtattcgttg tcctgttcca gtcggcacag gatctcttcc atattattga ccagcagaat
    45001 gcgtgactct tcggtggtaa aataccactc ccgatcccag tgcatatgcg gggtgatgtg
    45061 aacgcgagat actgctttca tcgtcgtttc ctttttgttt atggcattac gccatcagtc
    45121 agatagttgc catgcttaac cgcgtgacgc cgccagataa ggagaattgc agtcgagatt
    45181 gcagccccca ccaatgccgc accaaaccag ccaattgccg ccataacacc gcccgcgcca
    45241 ttatcatgaa gtaaaaagag cgagaaaatg ccggcaccgg gtgtcgaaag gccgatattc
    45301 atcgcgccga caatagcgcc cgttaccata gagcccagca caaacgaacc aataacccgc
    45361 agcggatctt caatcgccat cgggatcgcc ccttcggtaa tacctgccag ccctaacagc
    45421 caggtggatt ttccggtctc aatttcaaac tctttaaaca ggcgcggtgc gagcatcgtg
    45481 gaagcggtta cggtaaatgc cgaaaccatt ttgacggagg cgaaaatggc atacgggcca
    45541 taaacgccgt tcgccattgc gcccaggcag aatgcataag cggctttgtt cactggccct
    45601 ccaaggtcaa aggaacacat aaaaccgaga atggcaccca gcaacagcgc gttacttcct
    45661 gacagaccgt tcagccaggc ggtaagcgag ttattgatcc aggcgacagg ttcccccacc
    45721 acaaacagca tcagactgcc cgctcccaat gtaccgagca ccgggtagag ataaaaagtc
    45781 aggaagccat tgaatttact gctaagacgc aagtgatttt tcacccagcg catcagataa
    45841 ccggctatca atccgccaac gaccgcgccg agaaacccgg aaccgaccat gttggcggca
    45901 agtccagccg caaagcctgg cgctaacgcc ggtttatcag ccagtgaata ggcggtatag
    45961 gccgcgagca ccggcaccat caaaatcccg agcatcccgc cgcccagttt gcggtacatc
    46021 cacagccagg agttttcttc attaaacaaa tcttgtagcc cgaagatttg cgacagtaat
    46081 actgcaaccg ccagcaccgt gccccccgcg acaatcaacg gcacggcgaa agagatcccg
    46141 cttaacagcg cctgtttcag ctcagttttg acacttttca ccggttgcgt atcctgctgt
    46201 acggtacgcg tctcatcgct acgcttgagg gtaagcgctt gttggatcaa cgcttctgca
    46261 tggcgaatcg gctcggcaac aggcactgaa agcgcgggaa tgccattaaa acgctcactc
    46321 tccttgatgg cgacttcagc cgcaaaaata caggcggttg cactattgag ttgatccgcc
    46381 gttaaacgcc cttcaatgcc gttagcacct tgtttttcaa cgtaaacatt tacgccgagt
    46441 ttgcgtccgg ctttttccag atattccgca gccatatagg tgtgagcaat acccgccggg
    46501 caggccgtta cgcaaacgat agttggcgcg ttggaaaaag aggcagaagg ttgcgagcct
    46561 cccttgtcat ccagcgccga gagcaattca tcaggcgtcg tcgccgactg tatacgcgcc
    46621 ctgatctcat catcagccag gcgcgtggtc agcgctgtca gcagttgcat gtgcgtagta
    46681 cccgcttcat tggggggaat cgccagcaac accactaaat caactgcttc cgggccatcc
    46741 acgccttccc actgaagcgg ctcgctgagt gtggcgaccg caaacgccgc ttcttttacc
    46801 gcagcagttt tgccatgcgg cacagccaac ccttcaccta aggcggtcgg gccaaggctt
    46861 tcacggcgat acacttcttc cagaaattgc tcagtactgg aaattttccc cagagcagca
    46921 agacgttgag tcaacgcgtg gatggcctct tcacggctgg taaaacgcgc attcagacac
    46981 aacgcatcgc ggtgggtcag agtcgtcaga ttcatcatga tcctcacttg atcgttttta
    47041 tagtcgcgcc agggtgcccg ataaaacaat accattacgt gatcaatttc acttgattga
    47101 aattatttgt attgttttta tattgtttac aagatgaatt tatcgggcat aatggctaaa
    47161 ttcgtattaa tgagatacta gaaatgggac acaaaccctt ataccggcag attgccgatc
    47221 gcattcgtga gcaaattgcg cgtggggagc ttaaacctgg cgatgcgtta cctaccgaat
    47281 cggcattaca aacagagttt ggcgtcagcc gggttacggt gcgtcaggct ttgcgccagc
    47341 tagtcgagca gcagatcctc gaaagcattc agggcagcgg gacttacgtc aaagaagagc
    47401 gggtcaatta cgatattttt cagttaacca gttttgatga aaaactgtcg gaccgtcacg
    47461 tcgatacaca cagtgaagtt ctgatatttg aagtgattcc ggctgacgat tttcttcagc
    47521 aacagctaca aatcaccgcg caggatcgtg tgtggcatgt gaagcgcgtg cgctatcgca
    47581 agcaaaagcc aatggcgctg gaagaaacct ggatgccgct tgcgttgttc ccggatctca
    47641 cctggcaggt catggaaaat tcgaaatatc actttatcga agaagtgaag aaaatggtta
    47701 tcgatcgtag cgaacaggaa atcattcctc tgatgccaac cgaagaaatg agccgtctgc
    47761 ttaatatcag ccaggctaag ccgattcttg aaaaagtatc gcgtggatat ttagttgatg
    47821 gtcgggtgtt tgaatatagc cgcaacgctt ttaataccga tgactataaa tttaccctga
    47881 tagcgcaacg aaaatcatcg cgataagcac aaaaaaggcc atcatacgat ggccaaccat
    47941 gtcgaaaccg acagcccttc gccattcctg tagagggaag cggcgagggc tatttcttat
    48001 tacagatatt tatttcagaa cagttttcag tgcttcaccg atatccgcca ggctgcgaac
    48061 ggttttcacg cctgcggctt ccagagcagc gaatttctca tccgcagtcc ctttaccacc
    48121 ggcaatgatg gcacccgcgt ggcccatacg tttgcctttc ggcgcagtca caccagcgat
    48181 gtaacctaca actggcttgg taacgtgctc tttgatgtac gctgccgctt cttcttcagc
    48241 gctaccgccg atctcaccga tcatcacgat cgcttcggtc tgcggatctt tttcgaacat
    48301 ttcgagaatg tcgataaagt tagagccagg gatcgggtca ccgccgatac cgacacaggt
    48361 cgactgaccg aaaccgtaat ccgtggtctg tttaaccgct tcataggtca gtgtaccgga
    48421 acgggaaacg atacccactt tacccggttt gtgaatgtga ccaggctgga taccgatttt
    48481 gcattcaccc ggagtgatta cgcccggaca gttcgggccg atcatacgaa cgcctgcttc
    48541 atccagcttc actttcacgg tcagcatatc cagcgtcggg atgccttcag tgatggtaat
    48601 aatcagtttg atgcctgcat caatagcttc cagaatggag tctttgcaga acggtgctgg
    48661 tacgtagata acagaagcgg tagcgccagt agcagcaaca gcttcacgca cggtgttgaa
    48721 caccggcagg ccgaggtggg tagtaccgcc tttacctggg gttacgccgc caaccatttt
    48781 agtgccgtat gcaatggcct gttctgagtg gaaagtcccc tggctaccgg taaagccctg
    48841 gcagataacc ttggtgtttt tatcaattaa aatggacatt atttcccctc cactgcggca
    48901 acaacctgct gagctgcatc cgtcagacct tttgctgcaa taatattcag gccgctgtca
    48961 gccagtttct tcgcgccgag ttcggcgttg ttaccttcca gacgtaccac gaccggtacg
    49021 ttaacaccca cttccgctac cgcgccgatg ataccgtcag cgatcaggtc gcaacgaacg
    49081 ataccgccga agatgttaac cagaacggct ttcactttgt cgtcagagag gatgattttg
    49141 aacgcttcgg ttacacgttc tttggttgcg ccgccgccaa cgtccaggaa gttagccggt
    49201 tcgccgccgt gaagtttaac gatgtccatc gtacccatcg ccagacctgc gccgttaacc
    49261 atacaaccga tgttaccgtc cagcgcaacg tagttcagtt cccactgtgc agcctgtgct
    49321 tcacgcggat cttcctgcga ctggtcacgc atttcgcgca gatcaggctg gcggaacagg
    49381 gcgttgccat cagcgcccag tttgccgtcg aggcaaatca gatcgccctg tttggtgatg
    49441 accagcgggt tgatttcgat cagcgccagg tcgcgctcca ggaaaatggt cgccaggccc
    49501 atgaagattt tggtgaactg ctgaaccagt ttaccttcca gacccagttt gaacgccagc
    49561 tcgcgtccct gatacggcat cgggccagtc agcggatcaa gcgcaacttt atggatcagg
    49621 tgcggagttt cttccgccac tttttcgatt tccacgccgc cttcggtgga ggccataaag
    49681 accacacgac gggaactacg gtctacaacg gcaccgagat acagctcttt agcgatatcg
    49741 gtcgctgctt caaccagaat ctggttaacc ggttggccat tggcatctgt ttgatacgtt
    49801 accagacgct tgccgagcca gttttctgca aaagcacgga tgtcttcttt gctgtttaca
    49861 actttcacac cgcccgcttt accgcggcca ccagcgtgaa cctgacattt cactacccac
    49921 ggaccggcac cgatttttga agcggcttct tctgcttcgc gcggagtagt acaggcataa
    49981 cccactggtg ctggtaagcc atagcgggca aaaagttgtt ttgcctgata ttcatgtaag
    50041 ttcatgtgtt ctgtccatcc ttcagtaatc gttatctttt aaaccgtaga ccgacaccct
    50101 atccacgtcg gtctacagtg caggtgaaac ttaaactact acacgtccag cagcagacgc
    50161 gtcggatctt ccagcaactc tttgatcgtt accaggaagc ccacggattc gcgaccatcg
    50221 atcagacggt gatcgtagga cagcgccagg tacatcatcg gcaggatctc aacctgacca
    50281 ttcacagcca tcggacgatc tttgatagcg tgcataccca gaattgcgct ctgcggcggg
    50341 ttgatgatag gcgtagacat cagggaaccg aacacaccac cgttggtgat ggtgaagtta
    50401 ccaccggtca gatcttcaac cgtcagcttg ccgtcacggc ctttaactgc cagctctttg
    50461 attttcttct cgatgtctgc catgccgagg gtatcgacat cacgcagtac cggcgtcacc
    50521 aggccgcgcg gcgtagaaac cgccatgctg acgtcgaaat agttgtggta aaccacgtca
    50581 tcaccgtcga tagaagcatt cacttccggg taacgtttca gggcttcaac caccgctttc
    50641 acgtagaagg acataaagcc cagacggatg ccgtggcgtt tttcaaacgc ttcaccgtac
    50701 tgcttacgca gatccataat cggcttcatg ttgacttcgt tgaacgtggt cagcatggcg
    50761 gtggagtttt tcgcttccag cagacgctct gccacacgct tacgcaggcg agtcatcggg
    50821 acacgttttt cactacgtgc agccagagcc ggttgcgccg ccggagcagc cgctgccgga
    50881 gcagactctt tcgccggggc tttcgccaga tgtttttcca catcttcacg agtcagacga
    50941 ccacccacac cggtgccttt aatggcgctg gcgtcgagat tgtgttcagc cagcaggcga
    51001 cggatcgccg ggcttaacgc atcgttgttt tgctcttcca gagacgcctg ctggcgttgc
    51061 gccggagtgg acgctttctc ttcagatttg gcgctggttt ctttaccggc gctgttgcct
    51121 tcacgcaggc gaccaaggat ctgacgagac gttaccgttg taccttcatc ttccagaacc
    51181 gcatccagaa tgccgtctgc tgatgccggt acttccagta ccactttgtc agtttcgatt
    51241 tctaccagca cttcatcacg tacgactgcg tcgccgggtt ttttatgcca ggttgcgacg
    51301 gtggcatcgg ctacggattc aggcaggtca gggaccagaa tatctacgct actcattgtg
    51361 tatcctttat ttattcgacg ttcagcgcgt cattaaccag atcttgttgc tgtttctggt
    51421 gaacggacat ataccctacc gccggagagg cggaggccgg gcggcctgca taatgcagag
    51481 aagccccaaa cggaatcact tcacggaaat gatgctggct gcagtaccat gcgccctggt
    51541 tgagcggctc ttcctggcac cagacaaaat ccttgacgtt agcaaactgc tgcaacactt
    51601 cctgcatcgc tttatgcggg aacgggtaga gttgctcgat acgcacaatg gcgacatcgt
    51661 gttgattgtt cttacgacgt tgttccagca ggtcgtaata aaccttacca gaacacatca
    51721 ctacgcgctt cacgcccttc ggatcaagct cgtcgatttc accgatggct ggcaggaagg
    51781 tgccgttcgc cagttcttcg aggctggaaa ccgccagcgg atgacgcagc agggatttcg
    51841 gcgacatcac gaccagcgga cgacgcatcc cgcgcagcgc ctgacgacgc agcatgtggt
    51901 aaacctgtgc cggggtagac ggtacgcaaa cctgcatgtt ttgctcagca caaagttgca
    51961 gataacgttc cagacgcgcg gaggagtgct ccggcccctg cccttcgtaa ccgtgcggca
    52021 gcaacatcac cagaccacac atccggcccc atttctgctc gccagaggag atgaactggt
    52081 cgataaccac ctgcgcaccg ttggcgaagt caccgaactg cgcttcccag atggtcaggg
    52141 tgcgtggttc tgcggtggca taaccatatt caaacgccag cactgcttct tcagacagta
    52201 cggagtccca aacacggaac gcgccctggc cgttatggat gtgttgcagc ggcgtgtaag
    52261 tggaaccgtt agactggttg tggatcaccg cgtggcggtg gaagaaggta ccgcgaccgg
    52321 agtcttcacc cgacaggcga accggaatgc cttcgtcaac cagcgtggcg taagcgaggt
    52381 tttccgcgcc gccccagtcg aacagtttct caccagctgc catcgcctgg cgatcgccat
    52441 aaatcttggc aacgcgagac tgcatttcaa ctgcttctgg taccgtactg atacgtttag
    52501 ccagttcctg caggcgcttc atctcaactt tgttcgggta ctcttcgtcc cattcgtggt
    52561 tgaggtacgg cgaccaggtg aaagagtgca tgttcatcgg acgccactct gccactacgc
    52621 aatcgccagc atccagcgca tcgcggtaca ggttaaccat ctcggtggca tcttccagcg
    52681 tcgccacttt ttcctgctcc agcttgtcag cgtagatttt gcgcggtgtc ggatgttttt
    52741 tgattttctg atacatcagt ggctgggttg cgctcggctc gtcggcttcg ttgtggccgt
    52801 gacggcggta gcacaccagg tcgatgaaga catcacgttt aaaggtgtta cggaaatcga
    52861 gcgccaggcg ggtcacaaag gcaacggctt ccggatcgtc cgcgttaacg tggaaaatcg
    52921 gggcctgaac catcttgccg atatcagtac agtacggcgt agaacgggca tccagtggat
    52981 tagaggtggt gaaaccaacc tggttgttga taacgatacg taccgtaccg ccaacttcat
    53041 aaccacgcgc tttcgacatg ttcagggttt cctgaaccac gccctgtccg gtcactgcgg
    53101 cgtcaccgtg gatggtgatt ggcagcactt tgttgctgct cggctcatca agtctgtcca
    53161 gacgggcacg aacagaaccg ataactaccg ggctgacaat ctcaaggtga gacgggttaa
    53221 acgccagcgc caggtgcacc aggccgccat cggtctggaa gtcagacgag aagcccatgt
    53281 ggtatttcac gtcgcctgtg ccgaggtgtt ctttatgttt accggcgaac tcgtcgaaca
    53341 agtcttgcgg ttttttaccc agcacgttca ccagcacgtt cagacgacca cggtgcgcca
    53401 tcccgagaac cacttcgcgg gtgccgctgt tgccagcgtg gcggatcatc tctttaagca
    53461 tcgggattaa cgcgtcaccg ccttccagcg agaagcgttt tgcgccaggg aattttgcac
    53521 cgaggtaacg ttcaaggcct tcagcggcgg tcagttcgct taagaagcgt tttttctctt
    53581 cgctattgaa agtcgcgcga ccagactcga tacgctgttg gatccagcgt ttttcttcgg
    53641 tgctggtgat gtgcatatac tcggcaccaa tcgggccgca gtaggtttgc ttgagggctt
    53701 ccagcagctc gccgagtttc atggtttctt ttccgctggc aaatgaaccg acgttgaagg
    53761 tctcctggaa gtctgcttcg gtcagatcgt ggaaagacgg atccagatcg gccactttat
    53821 cttgctgcca cagtcccagc ggatcgagat tcgcatgctg gtgaccacgg aagcggtatg
    53881 cgttaatgag ctgcaggact ttaacctgct tcacattggt gtcagggtcg gagatcgttg
    53941 aagagtaacg tgaagcgtct ttcgccaggc ggcggaaata ttcacgcgtt tgagagtgga
    54001 attgatcctg tttgactccc gtaccaggta actgctggaa cgtcgaacgc cagttagcgt
    54061 caaccgagtc aggatcggtt aagaagtctt catagagctg ttctatccag ctctggtttg
    54121 cgccagagag gtaagaagag tccaaccagg ctttcaaagc gctgttctgc atcgtgatcc
    54181 cttaagcatc ttttttatgc ttacttcgcc gtggatacta ccacgcacag tgatgtgcgt
    54241 gccggggttc acttgcgagc tcttgtctac gtagtggctc gcgaaggaac ctttaaaaac
    54301 tgtcttagtg tcaggggcag tttttaaaga tttcctgcat ttctttgtta ctcctgatgc
    54361 gctgcgctta tcaggcctgc gggtaatgac ttgtaggccg gataaggcgt tcacgccgca
    54421 tccggcactg gttgcctgat gcaacgcttg cgcgtcttat caggcctaca gtttacgcat
    54481 tacgttgcaa caacatcgac ttgatatggc cgatggcgcg cgtcgggttc agccccttcg
    54541 gacatacact gacgcagttc atgatgctgt gacagcggaa tacgctgaat gcatcgctca
    54601 aaccgtcgag gcggctgtca gtctcggtat cacggctatc gatcaggaaa cgatatgccg
    54661 ctaacaagcc tgccgggccg ataaacttat cgggattcca ccagaaagac ggacaagagg
    54721 ttgaacaaca tgcgcagaga atacattcat acagcccgtc gagtttttcg cgctgctctg
    54781 gcatctgtaa atgctcgcga gctggcggat tttgtccatt attcaacagg taaggcttaa
    54841 ttttctcata ttgcgcatag aattgtccca tgtctaccac caaatcgcgg atcaccggta
    54901 aacctggcag cgggcgaatc acaatcttct tgcccggctg gttgagtgcc gaaatcgggg
    54961 taatacaggc cagaccattc ttgccgttca tgttcagacc gtcggaaccg cacacacctt
    55021 cacgacagga gcggcggaac gacaggctgg gatctttctc tttcagctgg ataagcgcat
    55081 ccagcagcat catgtcgcga ccttcttccg cttccagggt gtaatcctgc atacgcggag
    55141 catcatcaac atccgggtta tagcgataaa ttgaaaactc gagtctcatt ttcctgtctc
    55201 cgcattagta agtacgaatc ttcggcggga atgccgggcg cagtttcggt tccatgttga
    55261 cgcttcggcg cgtcatggat tccgactcag gcagatacag ggagtggcac agccagtttt
    55321 catcatcacg atccgggaag tcgaagcggc tatgtgcgcc acggctttcg gtacggaagt
    55381 tggcagaaac agccgttgca tacgccgttt ccatcaggtt atccagttcc aggcactcaa
    55441 cgcgctgggt gttgaactcg ctggaagtgt catccagacg ggcatttttc agacgctcgc
    55501 ggatcacttt caactgctca agccctttcg ccatcgcatc accttcacgg aagaccgaga
    55561 agttatgctg catacattct tgcagcgctt tacggatcgc caccggatct tcaccgttac
    55621 gattattgtt ccagcggttc aggcgatcca gagacgcttc aacatcagac tcgctggcat
    55681 cgcgcagtgc gccctgctcg gcgatagact cttgcagatg cagacctgcc gcgcgaccaa
    55741 agaccaccag gtccagcagc gagttgccgc ccagacggtt agcgccgtgt accgatacac
    55801 aagcgatttc accaacggca aacagtcccg gaacaaccac atcttcgcct ttctcattca
    55861 cagtcagcgc ctgaccggta actttggtcg gaataccgcc catcatgtag tgacaggttg
    55921 ggataaccgg aatcggctct ttcaccggat cgacgtgagc gaaggtacgg gaaagctcca
    55981 ggatacccgg cagacgggat tcgagaactt ctttacccag gtgatcgagt ttcagtttcg
    56041 cgtgtggccc ccacggacca tcacagccgc gaccttcacg gatttcaatc atgatggaac
    56101 gcgccaccac atcacggccc gccaggtctt tggcgttcgg cgcataacgc tccataaagc
    56161 gttcgccatg tttgttcagc agataaccgc cttcaccacg gcaaccttcg gtgaccagta
    56221 cgcccgcacc ggcaatgccg gtcgggtgga attgccacat ttccatatcc tgcaccggta
    56281 cgcctgcgcg gatagccatg ccgacaccgt cgccagtgtt aatgtgggcg ttagtggtgg
    56341 actgataaat acgccctgcc ccgccagtcg ccagcacggt agcgcgggct ttgaaataaa
    56401 ccacttcacc ggtttcgatg cacagtgcgg tacaacccac caccgcgcca tcctggtttt
    56461 tcaccagatc cagcgcatac cactcggaga aaatggtggt gtggtttttc aggttctgct
    56521 gataaagcgt gtgcaacagt gcgtgaccgg tacggtcagc agccgccgca gtgcgtgccg
    56581 cctgctcgcc gccgaagttt ttcgactgac cgccaaacgg acgttgatag atacgaccat
    56641 catcgagacg cgagaacggc aggcccatgt gttcgagttc cagaatcgct tccggcccgg
    56701 ttttacacat atattcaatc gcgtcctggt caccgatata gtccgaccct tttacggtgt
    56761 cgtacatatg ccattcccag ttatcttcat gggtattacc cagcgcaacg gtaatgccgc
    56821 cttgcgcaga aacggtatgg gaacgggtcg ggaagacttt agagagcagc gcacaggtct
    56881 ggccgctctg ggaaatttgc agcgccgcgc gcatacctgc gccaccggca ccaatcacaa
    56941 ctgcatcaaa ttctctgact ggcaatttca tcacacaccc cacaccacaa cgaatccata
    57001 aatcacgtaa accaccagtg caacgacaat caccagttgc agcatcaggc gcaaggccag
    57061 cggtttaacg tagtcggtca acacctgcca catgccgatc caggcatgaa tcaagataga
    57121 aaacagcgcc agcagggtga acactttggt gaacgcagag gcgaagaaac cgatccagac
    57181 ttcatatgtc agttcgccac tggtggcgaa aaaaccgacc atataaatga tgtagagcgt
    57241 caggacgata gcggtagcgc gaacgaggat gaaatcatgt acgccattgc gtcctaatgc
    57301 ggaggcgttg cttaccatac gaggactcct gcgagaagtg aaagcacgac agtaataaca
    57361 aaggagattt tggcagagcg tttacccgct tcgaatgttt cttccagata gccaaaatcc
    57421 atcatcatgt ggcgaatacc tacgacgacg tgatacgcca gagcggtaag gatgccccac
    57481 atgataaatt tgacgaagaa gctgcccata atcgcggaag cttgctcgaa accttcaggg
    57541 gaagagaggc tggtacccag aagccacagc aggatgccca ctgcaacaaa ggtgatcaca
    57601 ccggaaacgc gatggagaat ggacgctatc gccgtgatgg ggaaccggat ggtctgtagg
    57661 tccagattaa caggtctttg ttttttcaca tttcttatca tgaataacgc ccacatgctg
    57721 ttcttattat tccctgggga ctacgggcac agaggttaac tttctgttac ctggagacgt
    57781 cgggatttcc ttcctccggt ctgcttgcgg gtcagacagc gtcctttcta taactgcgcg
    57841 tcatgcaaaa cactgcttcc agatgcgaaa acgacacgtt acaacgctgg gtggctcggg
    57901 attgcagggt gttccggaga cctggcggca gtataggctg ttcacaaaat cattacaatt
    57961 aacctacata tagtttgtcg ggttttatcc tgaacagtga tccaggtcac gataacaaca
    58021 tttatttaat ttttaatcat ctaatttgac aatcatccaa caaagttgtt acaaacatta
    58081 ctaggaaaag catataatgc gtaaaagtta tgaagtcggt atttcaccta agattaactt
    58141 atgtaacagt gtggaagtat tgaccaattc attcgggaca gttattagtg gtagacaagt
    58201 ttaataattc ggattgctaa gtacttgatt cgccatttat tcgtcatcaa tggatccttt
    58261 acctgcaagc gcccagagct ctgtacccag gttttcccct ctttcacaga gcggcgagcc
    58321 aaataacaaa cgggtaaagc caggttgatg tgcgaaggca aatttaagtt ccggcagtct
    58381 tacgcaataa ggcgctaagg agaccttaaa tggctgatac aaaagcaaaa ctcaccctca
    58441 acggggacac agctgttgaa ctggatgtgc tgaaaggcac gctgggtcaa gatgttattg
    58501 atatccgtac tctcggttca aaaggtgtgt tcacctttga cccaggcttc acttcaaccg
    58561 catcctgcga atctaaaatt acttttattg atggtgatga aggtattttg ctgcaccgcg
    58621 gtttcccgat cgatcagctg gcgaccgatt ctaactacct ggaagtttgt tacatcctgc
    58681 tgaatggtga aaaaccgact caggaacagt atgacgaatt taaaactacg gtgacccgtc
    58741 ataccatgat ccacgagcag attacccgtc tgttccatgc tttccgtcgc gactcgcatc
    58801 caatggcagt catgtgtggt attaccggcg cgctggcggc gttctatcac gactcgctgg
    58861 atgttaacaa tcctcgtcac cgtgaaattg ccgcgttccg cctgctgtcg aaaatgccga
    58921 ccatggccgc gatgtgttac aagtattcca ttggtcagcc atttgtttat ccgcgcaacg
    58981 atctctccta tgccggtaac ttcctgaata tgatgttctc cacgccgtgc gaaccgtatg
    59041 aagttaatcc gattctggaa cgtgctatgg accgtattct gatcctgcac gctgaccatg
    59101 aacagaacgc ctctacctcc accgtgcgta ccgctggctc ttcgggtgcg aacccgtttg
    59161 cctgtatcgc agcaggtatt gcttcactgt ggggacctgc gcacggtggt gctaacgaag
    59221 cggcgctgaa aatgctggaa gaaattagct ccgttaaaca cattccggaa tttgttcgtc
    59281 gtgcgaaaga taaaaatgat tctttccgcc tgatgggctt cggtcaccgc gtgtacaaaa
    59341 attacgaccc gcgcgccacc gtaatgcgtg aaacctgcca tgaagttctg aaagagctgg
    59401 gcaccaaaga tgacctgctg gaagtggcta tggagctgga aaacatcgcg ctgaacgacc
    59461 cgtactttat cgagaagaaa ctgtacccga acgtcgattt ctactctggt atcatcctga
    59521 aagcgatggg tattccgtct tccatgttca ctgtcatttt cgcaatggca cgtaccgttg
    59581 gctggatcgc ccactggagc gaaatgcaca gtgacggtat gaagattgcc cgtccgcgtc
    59641 agctgtatac aggatatgaa aaacgcgact ttaaaagcga tatcaagcgt taatggttga
    59701 ttgctaagtt gtaaatattt taacccgccg ttcaaatggc gggttaaatt ttatatgcct
    59761 aaacacaaaa aattgtaaaa ataaaatcca ctatcggaca ttcacatatt ctaaaaaaaa
    59821 catatcggta taaattataa acaaatcgat gttttttaat catctatctt cctctcagtt
    59881 acatgaataa accaccaaat atagcgcccc cctataattt ccaatacttt attcatcaaa
    59941 catttaattc ataccatcaa ttaattactt ttacatttaa taaaattaat aatattttta
    60001 agaaaaacta aaaacattcg acaatcaaat aagatattcc tgcaccgata tacttttttc
    60061 ttttctgtta aaggactccg ttatgtttaa aggacaaaaa acattggccg cactggccgt
    60121 atctctgttg ttcactgcac ctgtttatgc agctgatgaa ggatccggtg caattcattt
    60181 taaaggtgag gttattgaag caccttgtga aatacatcag gatgatattg ataaagaagt
    60241 tgaacttggt caggtgacca ccagccacat taatcagtca catcacagcg atgccgttgc
    60301 tgtcgacctg cgcttagtca actgtgatct ggaaaactcc agcaacggtt ccggtggcaa
    60361 gatttctaaa gttgcagtca cctttgatag ctcagcgaaa accaccggcg cagatccgat
    60421 tctcaacaac accagcacgg gtgaagccac cggcgt
//
LOCUS       DAJVTL010000005        60175 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.005, whole genome shotgun sequence.
ACCESSION   DAJVTL010000005 DAJVTL010000000
VERSION     DAJVTL010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 60175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60175
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.005"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..116)
                     /locus_tag="OQQ26_000287"
     CDS             complement(<1..116)
                     /locus_tag="OQQ26_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HCS1855891.1"
                     /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLE"
     gene            complement(222..1724)
                     /gene="dtpA"
                     /locus_tag="OQQ26_000288"
     CDS             complement(222..1724)
                     /gene="dtpA"
                     /locus_tag="OQQ26_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HCS1855892.1"
                     /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
                     IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY
                     RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
                     VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
                     ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
                     LMSLEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQDDAADKAAKAAVA"
     gene            complement(2335..2970)
                     /gene="nth"
                     /locus_tag="OQQ26_000289"
     CDS             complement(2335..2970)
                     /gene="nth"
                     /locus_tag="OQQ26_000289"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HCS1855893.1"
                     /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
                     VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPSEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
     gene            complement(2970..3665)
                     /gene="rsxE"
                     /locus_tag="OQQ26_000290"
     CDS             complement(2970..3665)
                     /gene="rsxE"
                     /locus_tag="OQQ26_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxE"
                     /protein_id="HCS1855894.1"
                     /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG
                     ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAT
                     AERTLPNGETGNV"
     gene            complement(3669..4289)
                     /gene="rsxG"
                     /locus_tag="OQQ26_000291"
     CDS             complement(3669..4289)
                     /gene="rsxG"
                     /locus_tag="OQQ26_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HCS1855895.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA
                     LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
                     AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
     gene            complement(4293..5351)
                     /gene="rsxD"
                     /locus_tag="OQQ26_000292"
     CDS             complement(4293..5351)
                     /gene="rsxD"
                     /locus_tag="OQQ26_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HCS1855896.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL
                     VQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
                     VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHDIAVNIPSFIDAIQ
                     VIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYTGILAGA
                     GWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLASPQIHLLS
                     GATMLGAFFILTDPVTASTTNRGRLMFGALAGLLVWLIRCFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
     gene            complement(5352..7478)
                     /gene="rsxC"
                     /locus_tag="OQQ26_000293"
     CDS             complement(5352..7478)
                     /gene="rsxC"
                     /locus_tag="OQQ26_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HCS1855897.1"
                     /translation="MLNLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV
                     IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIARHSTAHPSA
                     LAELSVIIDADGEDCWIPRDGWADYRSLRREELIERIHQFGVAGLGGAGFPTGVKLQG
                     GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP
                     QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
                     KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
                     QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARA
                     KARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAIE
                     AAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDP
                     RKAAVAAAIARVQAKKAAQQKVVNED"
     gene            complement(7471..8049)
                     /gene="rsxB"
                     /locus_tag="OQQ26_000294"
     CDS             complement(7471..8049)
                     /gene="rsxB"
                     /locus_tag="OQQ26_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HCS1855898.1"
                     /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL
                     PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
                     ITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
     gene            complement(8049..8630)
                     /gene="rsxA"
                     /locus_tag="OQQ26_000295"
     CDS             complement(8049..8630)
                     /gene="rsxA"
                     /locus_tag="OQQ26_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HCS1855899.1"
                     /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
                     LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            complement(8707..9147)
                     /locus_tag="OQQ26_000296"
     CDS             complement(8707..9147)
                     /locus_tag="OQQ26_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HCS1855900.1"
                     /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
                     QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
                     KAFAFSPVEDGIAVRQLLFTLLATALIVPYFKRSSRVKATFVNP"
     gene            complement(9233..9448)
                     /gene="ydgT"
                     /locus_tag="OQQ26_000297"
     CDS             complement(9233..9448)
                     /gene="ydgT"
                     /locus_tag="OQQ26_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HCS1855901.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
                     HRRAELVSGGRLFDLGQVPKSVWHYVQ"
     gene            complement(9720..9845)
                     /gene="blr"
                     /locus_tag="OQQ26_000298"
     CDS             complement(9720..9845)
                     /gene="blr"
                     /locus_tag="OQQ26_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HCS1855902.1"
                     /translation="MNRLIELTGWIVLVVSVILLDVASHIDNYQPPEQSTTVQHK"
     gene            10088..11128
                     /locus_tag="OQQ26_000299"
     CDS             10088..11128
                     /locus_tag="OQQ26_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCS1855903.1"
                     /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVK
                     ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKSGERLPQEDWGYDMRD
                     GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI
                     ESAKHRATLCLA"
     gene            complement(11164..12165)
                     /gene="add"
                     /locus_tag="OQQ26_000300"
     CDS             complement(11164..12165)
                     /gene="add"
                     /locus_tag="OQQ26_000300"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HCS1855904.1"
                     /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAHSLETLI
                     PHVQVIANEPDLVSFLTKLDWGVKVLSSLDACRRVAFENIEDAARHGLHYVELRFSPG
                     YMAMAHQLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
                     DQITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAIEDRALMDFLAEQKIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRASIN
                     TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
     gene            complement(12269..13441)
                     /gene="malY"
                     /locus_tag="OQQ26_000301"
     CDS             complement(12269..13441)
                     /gene="malY"
                     /locus_tag="OQQ26_000301"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional maltose regulon transcriptional
                     repressor/cystathionine beta-lyase MalY"
                     /protein_id="HCS1855905.1"
                     /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
                     CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDTQTVVYGPSVIYMVSE
                     LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK
                     PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS
                     NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
                     HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQLPQSTYLAWLDLRPLNID
                     DNALQKVLIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
     gene            complement(13451..14128)
                     /gene="malX"
                     /locus_tag="OQQ26_000302"
                     /pseudo
     CDS             complement(13451..14128)
                     /gene="malX"
                     /locus_tag="OQQ26_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416138.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS maltose transporter subunit IICB"
     gene            14176..15300
                     /gene="uidB"
                     /locus_tag="OQQ26_000303"
     CDS             14176..15300
                     /gene="uidB"
                     /locus_tag="OQQ26_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001075885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide transporter"
                     /protein_id="HCS1855906.1"
                     /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAA
                     AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD
                     WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV
                     CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLK
                     ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVG
                     TVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG
                     VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG"
     gene            15331..15525
                     /locus_tag="OQQ26_000304"
     CDS             15331..15525
                     /locus_tag="OQQ26_000304"
                     /inference="COORDINATES: protein motif:HMM:NF024742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1855907.1"
                     /translation="MGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPL
                     TDKKFKEIVVEIDNRKKVQQ"
     gene            15588..16853
                     /gene="uidC"
                     /locus_tag="OQQ26_000305"
     CDS             15588..16853
                     /gene="uidC"
                     /locus_tag="OQQ26_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide uptake porin UidC"
                     /protein_id="HCS1855908.1"
                     /translation="MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRA
                     DKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGD
                     KSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
                     YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDI
                     SRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETA
                     LVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVN
                     YRLTPQFTLTFAPIVTRGYESSKRDVRIEGAGILGGMNYRVSEGPLQGMNFFLAADKG
                     REKRDGSTLGDRLNYWDVKMSIQYDFMLK"
     gene            complement(17079..18587)
                     /locus_tag="OQQ26_000306"
     CDS             complement(17079..18587)
                     /locus_tag="OQQ26_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HCS1855909.1"
                     /translation="MNKSLVAVGVIVALGIVWTGGAWYTGKKIEPHLEDMVAQANAQL
                     KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
                     LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
                     PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
                     TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANSPELY
                     QEKVTEAFFSALPLMLKGDPVITVAPLSWKNSQGESALNLSLFLKDPTTTKEAPQTLA
                     QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
                     LTTLQDNTITTSLQYANGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ"
     gene            complement(18688..19863)
                     /gene="manA"
                     /locus_tag="OQQ26_000307"
     CDS             complement(18688..19863)
                     /gene="manA"
                     /locus_tag="OQQ26_000307"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HCS1855910.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
                     SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
                     HNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
                     VAGAHPAIAHFLQQPHAEHLSELFASLLNMQGEEKSRALAILKSTLDSQQGEPWQTIR
                     LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
                     ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
     gene            20062..21708
                     /gene="fumB"
                     /locus_tag="OQQ26_000308"
     CDS             20062..21708
                     /gene="fumB"
                     /locus_tag="OQQ26_000308"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HCS1855911.1"
                     /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQGFRDVELEKEL
                     LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
                     IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
     gene            21851..23254
                     /gene="fumC"
                     /locus_tag="OQQ26_000309"
     CDS             21851..23254
                     /gene="fumC"
                     /locus_tag="OQQ26_000309"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HCS1855912.1"
                     /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
                     IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
                     NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
                     IPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
                     LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
                     MLCCQVMGNDVAINMGGASGNFELNVFRPLVIYNFLQSVRLLADGMESFNKHCAVGIE
                     PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
                     DRWVRPEQMVGSMKAGR"
     gene            complement(23251..24180)
                     /gene="tus"
                     /locus_tag="OQQ26_000310"
     CDS             complement(23251..24180)
                     /gene="tus"
                     /locus_tag="OQQ26_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707509.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HCS1855913.1"
                     /translation="MARYDLVDRLNTTFRQMEQELATFAAHLEQHKLLVARVFSLPEV
                     KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLT
                     VLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
                     IAALPQDAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE
                     LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
     gene            complement(24256..25557)
                     /gene="rstB"
                     /locus_tag="OQQ26_000311"
     CDS             complement(24256..25557)
                     /gene="rstB"
                     /locus_tag="OQQ26_000311"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HCS1855914.1"
                     /translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN
                     SSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVA
                     LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPMFIWMRPH
                     WQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDG
                     IAHELRTPLVRLRYRLEMSDNLSATESQALNRDISQLEALIEELLTYARLDRPQNELH
                     LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRY
                     CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA
                     IVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA"
     gene            complement(25561..26280)
                     /gene="rstA"
                     /locus_tag="OQQ26_000312"
     CDS             complement(25561..26280)
                     /gene="rstA"
                     /locus_tag="OQQ26_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
                     /protein_id="HCS1855915.1"
                     /translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE
                     NPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT
                     TPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEI
                     SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAA
                     EPYRIKTVRNKGYLFAPHAWE"
     gene            26408..26743
                     /locus_tag="OQQ26_000313"
     CDS             26408..26743
                     /locus_tag="OQQ26_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
                     /protein_id="HCS1855916.1"
                     /translation="MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHY
                     IVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWV
                     LIICWIKLH"
     gene            complement(26740..27462)
                     /gene="folM"
                     /locus_tag="OQQ26_000314"
     CDS             complement(26740..27462)
                     /gene="folM"
                     /locus_tag="OQQ26_000314"
                     /EC_number="1.5.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydromonapterin reductase"
                     /protein_id="HCS1855917.1"
                     /translation="MGKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
                     DGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWIAEKPGAPLADVL
                     ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHVAYAASKAALD
                     NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
                     YLFTSCFVTGRSFPLDGGRHLR"
     gene            complement(27499..28881)
                     /locus_tag="OQQ26_000315"
     CDS             complement(27499..28881)
                     /locus_tag="OQQ26_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1855918.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
                     ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPELRLFGDGNTWQSLVGASALLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
                     MGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
                     SVPATWMLVG"
     gene            complement(29067..30011)
                     /locus_tag="OQQ26_000316"
     CDS             complement(29067..30011)
                     /locus_tag="OQQ26_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCS1855919.1"
                     /translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
                     RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETNNR
                     VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITNAAKAKGAYSFYIVRQIDA
                     NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
                     SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
                     VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK"
     gene            30535..32067
                     /gene="pntA"
                     /locus_tag="OQQ26_000317"
     CDS             30535..32067
                     /gene="pntA"
                     /locus_tag="OQQ26_000317"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HCS1855920.1"
                     /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS
                     FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM
                     QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK
                     AGSVIVDLAAQNGGNCEYTVPGEIFSTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE
                     EKCACSPWRKYALMALAIILFGWLSSVAPKEFLGHFTVFALACVVGYYVVWNVSHALH
                     TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR
                     KN"
     gene            32078..33466
                     /gene="pntB"
                     /locus_tag="OQQ26_000318"
     CDS             32078..33466
                     /gene="pntB"
                     /locus_tag="OQQ26_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HCS1855921.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
                     HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
                     AKASVDAILKAL"
     gene            complement(33491..34525)
                     /gene="tqsA"
                     /locus_tag="OQQ26_000319"
     CDS             complement(33491..34525)
                     /gene="tqsA"
                     /locus_tag="OQQ26_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2 transporter TqsA"
                     /protein_id="HCS1855922.1"
                     /translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA
                     VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM
                     TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLF
                     MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL
                     DVRFAFVSGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG
                     NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI
                     AVLLSDLNKE"
     gene            34937..35302
                     /gene="mdtJ"
                     /locus_tag="OQQ26_000320"
     CDS             34937..35302
                     /gene="mdtJ"
                     /locus_tag="OQQ26_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HCS1855923.1"
                     /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
                     YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFGESLSLMKIAGLTTLVAGIVLI
                     KSGTRKARKPELEVNHGAV"
     gene            35289..35618
                     /gene="mdtI"
                     /locus_tag="OQQ26_000321"
     CDS             35289..35618
                     /gene="mdtI"
                     /locus_tag="OQQ26_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HCS1855924.1"
                     /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
                     VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
                     MIMVKLA"
     gene            complement(35657..36478)
                     /locus_tag="OQQ26_000322"
     CDS             complement(35657..36478)
                     /locus_tag="OQQ26_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HCS1855925.1"
                     /translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
                     VPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRF
                     VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
                     LPLFEGDKAALTAALKSAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
                     LPGDSGSPLMLHTNDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
     gene            complement(36578..36661)
                     /locus_tag="OQQ26_000323"
     CDS             complement(36578..36661)
                     /locus_tag="OQQ26_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855926.1"
                     /translation="MVGRYRFEFILIILILCALIAARFYLS"
     gene            complement(36754..37089)
                     /locus_tag="OQQ26_000324"
     CDS             complement(36754..37089)
                     /locus_tag="OQQ26_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310330.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid shock protein"
                     /protein_id="HCS1855927.1"
                     /translation="MKKQIEGMTMKKVLALVVAAAMGLSSAAFAAETATTPAPTATTT
                     KAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNAKAEQKAPEQKAQAAKKHAKKHSHQQP
                     AKPAAQPAA"
     gene            complement(37486..38739)
                     /locus_tag="OQQ26_000325"
     CDS             complement(37486..38739)
                     /locus_tag="OQQ26_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1855928.1"
                     /translation="MSRTTTVDGAPASDTDKQSISQPNQFIKRGTPQFMRVTLALFSA
                     GLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKS
                     VMVTALLLASICTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
                     SMGLYISGNSIGGMSGRLISGVFTDFFNWRIALAAIGCFALASALMFWKILPESRHFR
                     PTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGSFVTLFNYIGYRLMLSPWHVSQAV
                     VGLLSLAYLTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFGLLMTLFSSLWLIFAGML
                     LFSAGFFAAHSVASSWIGPRAKRAKGQASSLYLFSYYLGSSIAGTLGGVFWHNYGWNG
                     VGAFIALMLVIALLVGTRLHRRLHA"
     gene            38846..39736
                     /locus_tag="OQQ26_000326"
     CDS             38846..39736
                     /locus_tag="OQQ26_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1855929.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
                     IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
                     APFIRAVSDTLSLFRRDYPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
                     AVIVHEPLMAMIPHDHPLANNPSVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL
                     TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWP
                     KHHEQSPASRFRIHLLNALR"
     gene            39871..41091
                     /gene="mlc"
                     /locus_tag="OQQ26_000327"
                     /gene_synonym="dgsA"
     CDS             39871..41091
                     /gene="mlc"
                     /locus_tag="OQQ26_000327"
                     /gene_synonym="dgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor Mlc"
                     /protein_id="HCS1855930.1"
                     /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
                     DLSSKLVVEESQELALKDDSPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
                     NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILE
                     LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKD
                     AMYNGSLLIRLLQG"
     gene            41216..41911
                     /gene="bioD"
                     /locus_tag="OQQ26_000328"
     CDS             41216..41911
                     /gene="bioD"
                     /locus_tag="OQQ26_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HCS1855931.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS
                     KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
                     TEKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
                     MLRSVLAVDRVTV"
     gene            complement(41864..43156)
                     /gene="clcB"
                     /locus_tag="OQQ26_000329"
     CDS             complement(41864..43156)
                     /gene="clcB"
                     /locus_tag="OQQ26_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001296088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HCS1855932.1"
                     /translation="MHHLHIYPDLRTMFRRLLIATVVGILAAFAVAGFRHAMLLLEWL
                     FLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQ
                     TDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWI
                     ACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDAL
                     LYSVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGG
                     LIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASRGSGAPGGVF
                     TPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMATLLAATTHAPIMSTLMICEM
                     TGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
     gene            complement(43314..43928)
                     /gene="dmsD"
                     /locus_tag="OQQ26_000330"
     CDS             complement(43314..43928)
                     /gene="dmsD"
                     /locus_tag="OQQ26_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707489.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HCS1855933.1"
                     /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
                     QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
                     RFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR"
     gene            complement(43971..44825)
                     /locus_tag="OQQ26_000331"
     CDS             complement(43971..44825)
                     /locus_tag="OQQ26_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707488.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HCS1855934.1"
                     /translation="MGNGWHEWPLVIFTVLGQCVVGALIVSGIGGFAAKNDADRQHIV
                     RGMFFLWLLMGIGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWL
                     VAVIGKMPQALGKLWLLVSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLS
                     GPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVP
                     DYASLQVWRVVLLCAGLGCWLCPLIRRREPHVAGLVLGLILILVGEMIGRVLFYGLHM
                     TVGMAIAG"
     gene            complement(44827..45442)
                     /gene="dmsB"
                     /locus_tag="OQQ26_000332"
                     /pseudo
     CDS             complement(44827..45442)
                     /gene="dmsB"
                     /locus_tag="OQQ26_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
     gene            complement(45453..47877)
                     /locus_tag="OQQ26_000333"
                     /pseudo
     CDS             complement(45453..47877)
                     /locus_tag="OQQ26_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416105.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
     gene            complement(47938..50364)
                     /locus_tag="OQQ26_000334"
                     /pseudo
     CDS             complement(47938..50364)
                     /locus_tag="OQQ26_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416104.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
     gene            complement(50563..50868)
                     /locus_tag="OQQ26_000335"
     CDS             complement(50563..50868)
                     /locus_tag="OQQ26_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
                     /protein_id="HCS1855935.1"
                     /translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE
                     SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSGNVSAPAQSTQDGAPAEPQ"
     gene            50976..51686
                     /locus_tag="OQQ26_000336"
     CDS             50976..51686
                     /locus_tag="OQQ26_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HCS1855936.1"
                     /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRG
                     PVKDFTQTLMDEQGEVTKRVSGTVSEEGCFDSLELLDLENNTVVALVLDANYYRDAET
                     LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS
                     NDKTLSVSAMPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG
                     VKPGVERVYTIKNTIDYY"
     gene            complement(51689..52249)
                     /gene="speG"
                     /locus_tag="OQQ26_000337"
     CDS             complement(51689..52249)
                     /gene="speG"
                     /locus_tag="OQQ26_000337"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HCS1855937.1"
                     /translation="MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVEL
                     SDLYDKHIHDQRERRFVVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATR
                     AAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAI
                     RMCIFQHQYLAEHKTPGQTLLKPTAQ"
     gene            complement(52284..52625)
                     /locus_tag="OQQ26_000338"
     CDS             complement(52284..52625)
                     /locus_tag="OQQ26_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1283 family protein"
                     /protein_id="HCS1855938.1"
                     /translation="MKITLSKRIGLLAFLLPCALALSTTVHAETNKLVIESGDSAQSR
                     QHAAMEKEQWNDTRNLRQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRC
                     LDRRTGRVITP"
     gene            52760..53086
                     /locus_tag="OQQ26_000339"
     CDS             52760..53086
                     /locus_tag="OQQ26_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HCS1855939.1"
                     /translation="MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLAL
                     FVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIV
                     AGWGRT"
     gene            53292..53834
                     /gene="rspA"
                     /locus_tag="OQQ26_000340"
                     /pseudo
     CDS             53292..53834
                     /gene="rspA"
                     /locus_tag="OQQ26_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001625315.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="starvation-sensing protein RspA"
     gene            53873..55333
                     /locus_tag="OQQ26_000341"
     CDS             53873..55333
                     /locus_tag="OQQ26_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HCS1855940.1"
                     /translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
                     ATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADVWTARVVGVVKKALHVQI
                     DGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG
                     VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDVKLAQWIEDNVTFP
                     STMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAE
                     LVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAP
                     TLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKF
                     DLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIF
                     GDDLPDNSLFTAKVTEAYLSLLAHGAKATVAKYSVK"
     gene            complement(55369..55572)
                     /gene="ydfZ"
                     /locus_tag="OQQ26_000342"
     CDS             complement(55369..55572)
                     /gene="ydfZ"
                     /locus_tag="OQQ26_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HCS1855941.1"
                     /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
                     KTVVVEGCEEKLAPLDLIRLGMN"
     gene            complement(55749..56435)
                     /gene="ydfH"
                     /locus_tag="OQQ26_000343"
     CDS             complement(55749..56435)
                     /gene="ydfH"
                     /locus_tag="OQQ26_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YdfH"
                     /protein_id="HCS1855942.1"
                     /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVR
                     FNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAA
                     SMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLK
                     ATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIR
                     QENSDWFSEE"
     gene            complement(56524..57270)
                     /gene="ydfG"
                     /locus_tag="OQQ26_000344"
     CDS             complement(56524..57270)
                     /gene="ydfG"
                     /locus_tag="OQQ26_000344"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HCS1855943.1"
                     /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL
                     GDNLYIAQLDVRNRAAIEEMLASLPAEWSNIDILVNNAGLALGMEPAHKASVEDWETM
                     IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGNWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
                     VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
     gene            57407..59452
                     /gene="dcp"
                     /locus_tag="OQQ26_000345"
     CDS             57407..59452
                     /gene="dcp"
                     /locus_tag="OQQ26_000345"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HCS1855944.1"
                     /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
                     AIALNPQTPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
                     ANDIYLNGELFARVDAVWQSRESLGLDSESIRLVEIIHQRFVLAGAKLAQADKAKLKV
                     LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
                     IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLL
                     GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
                     WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
                     PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHQVIYNVCNYQ
                     KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
                     ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
                     NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
                     GYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLYRQWRGKAPQIMPMLQHRGLNI"
     gene            complement(59497..60015)
                     /locus_tag="OQQ26_000346"
     CDS             complement(59497..60015)
                     /locus_tag="OQQ26_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HCS1855945.1"
                     /translation="MNINKDKIVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGG
                     KLASALCAVEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAI
                     ERADADVSIAITGYGGPEGGEDGTPAGTVWFAWHIKGQNYTAVMHFAGDCETVLALAV
                     RFALAQLLQLLL"
BASE COUNT        15081 a        14747 c        15419 g        14928 t
ORIGIN      
        1 ttttcgagac gttttttcat taaatccaca ctgacgagcg taaaatcctt tccgctctca
       61 cgcagggtga tatgggaagc gagagagcag gcgcccggtt tgtagaacaa tttcatcggt
      121 aactcctttt gtctgtggtt taaagtatgg tagtgcgttg ctgaacaaaa aaaaagccgc
      181 taacgaaaag ttagcggctt gtaaaagagt ttccctgaat tttacgctac agcagctttc
      241 gccgctttgt ctgcagcgtc atcctgcgtc atacggtgca gtttcggcgc ggtcagcagc
      301 atcagtactg caataacggc agtagcgaca ccaatctgca agaatacgcg accataaact
      361 tccagtgaca tcagcgggtc ggtaacgtta tccggcacag ccatcatacc cgcaacataa
      421 ccaccaatca ggtttgcacc ggcagtggtc aggaaccagc tacccataat gaagcccatc
      481 agacgctgcg gaacgagttg tgcaaccatt gccagaccca gaccagagat catcagttcc
      541 ccgatgctct gcaggccata gcttgcgacc agccagctta cagacacgat accagcgtca
      601 gacgcgaatt tcgcacccag cggcagaatc aggaacgcac cagaacacat caccatgccg
      661 attgcaaact tggttggcat cggcagggta tcgcccatct tgttatagat agcggccaga
      721 atcggactac cgatgatgat ccagaacggg ttcagcgcct gatactgctc aggttctacg
      781 gccagaccca gaatggagtg ctcaacgtta cgaatcgcaa agaagttcag tgacgttggc
      841 atctggctgt acagcacgaa gaagataatg gcttcgagca tcaggatgaa ggcaacgatc
      901 attttacgac gcgcagcacc tttcatcgcg aaggcttctt taccgaagat aaccacgata
      961 ccgaaggcaa caacgcccag cgccatacgc gcaacttcct gattgtgcag cagccaggtg
     1021 gcgatagcga tcagtgccac aacaccaata atggtcagca gcaggttacg gtagttgata
     1081 ggctcgaagt ctggttttga accgtactgt ttaacccagc gttggcagaa ggcgaagtta
     1141 acgatagtga tcagcaggcc tacaacgctc aatgcaaacg caacgctcca gccgtatttc
     1201 gcggccagcc acggcgtagc aatcatagag aagaaagagc cgatgttgac ggacatgtag
     1261 tacatggtga atgcaccgtc cagacgcggg tcgtttttct catagcatgt agaaagcaga
     1321 gaagacgggt tagctttaaa caggccgtta ccgaccgcaa tagccgccat acccatataa
     1381 acgataccgg cgtcgtgacc agaccaggca accagagcat aaccaatcgc cagcacaata
     1441 gcgccgagca taattacgcg tttagtaccc agtaccttgt cacctaacca gccgccgata
     1501 gcgaccagac cataaaccag ggcactaaag gaagagaaaa gggtgattga atccgcttca
     1561 gacataccca gttgtttaac caggtaaaca gccataattc cttgtaggcc gtaataacca
     1621 aaacgttccc ataactcaat cgagaagatg agatagaacg ccttcggttg tttgaaagcg
     1681 ttcaaactga cgctttcagt tggtttttgg tttgcagtgg acacttttac ctcttttttt
     1741 acatcccata ttaacggggg tgctttctcg cgttatgtct aaaaaacata cgcgcaattg
     1801 ttatagtggg aggggaaacg gcaggtaatg ttcactatct tgcactttca gacaagtcct
     1861 ttgtaataat ctgttacata taactgaggc gaggaattca accattccgg gaaatgttat
     1921 ccagcgttaa atttttcaaa aaacgtaacg gcagattttt tcactgcatt gagaggggga
     1981 tgatggtttg acggcgatat gttctgctat ttcgcgtttt tcctagtgag atagtccagt
     2041 ttctgaaaaa tagccagtgt aatgttttgt aggtcaatat ttgttgcgtg tgtaaattta
     2101 aatgatttta acctgattct tgcaatgttt ttacattgcc acagcatcgt gatcttgatc
     2161 acgaatgaat agaaaatttc gctattaaaa aaacaattaa cctgcatttt tggttatccg
     2221 caaacggatt acctgatgat aacgctaagc aatggcatca ttgacgttaa aaagatgttt
     2281 taaaagagga taaagaaagg ttatcaatgg ggtaatgggt gttacccctt ttcttcagat
     2341 gtcaactttc tctttgtatt cacaaagatc ttcaataata caagagccac agcggggctt
     2401 gcgggcaatg caggtataac gcccgtgcag gatcaaccaa tggtggcagt cgactttaaa
     2461 ctctgacgga accactttca gtagcttttc ttctacctgt tcgacgtttt tccccggcgc
     2521 aaattgagta cgattacaaa cgcggaaaat gtgcgtgtcg acagcaatag tcggccagcc
     2581 gaatgcagtg tttaatacga cgttggctgt tttacgacct acgccgggca gggcttcaag
     2641 cgcagcacga tcttccggaa cctcgccatt atgttgttcc agtaatatac ggcaggtttt
     2701 gatgatattt tctgctttgc tgttataaag gccaatcgtt ttgatatagg ttttcacccc
     2761 ttcaacgccc agttcaagca tcgctgcagg cgtattcgcc accgggtaga gtttcgccgt
     2821 cgccttatta acactgacat cggtcgcctg agcggaaagc agtacggcaa tcagcaattc
     2881 aaaaggcgaa ctgaaattaa gctcggtggt gggatgagga ttgttctcac gcaggcgagt
     2941 gaggatctcc aggcgttttg ctttgttcat cagacattcc ctgtttcacc gtttggcaat
     3001 gtacgttcgg cagttgcttc agcacggcgc tttttcattc tttcatcaat caggtatttt
     3061 cctgccagca tcagtcccaa gccaataaat gcacctggag gcagcatcgc cagcaggaaa
     3121 ggggaatcgg tgtggaaaat ctccacgcgt aatacttttg cccagctacc taacagcgca
     3181 tctgcaccgt caaacaacgt gccattgccg ataatttcgc gtagtgaacc cagcacgaac
     3241 atggcgcagg ttgcgcccat accaattgaa aagccgtcca gtgccgaaag cgccggacct
     3301 tttttggcgg cgaaggcttc agcgcggccc acaacgatac agttagtgac aatcagcgga
     3361 ataaaaatcc ctaatgattg atacaggcca aaggcgtagg cgttgatcag catctgtaca
     3421 gcgctgacca ccgaggcgat gatcatcacg taaatgggaa tgcggatctc ggctggcgtc
     3481 cagtgacgca gcgtcgaaat ggtcaggttg gtcagcgtca gtaccagcgt agtcgcaagt
     3541 cctaaaccca gagcgttagt ggcagtggac gtgaccgcca atagcggaca aaggccgagc
     3601 agctggacca gtgcagagtt gtttttccac aacccctgaa caataacgtc tttaatttcg
     3661 ctcacgcttt attctccaca ggcaggaagt tgagaaagtt gtgccggtaa cgtctgagcg
     3721 tacaatccgg cgcgttttac cgcattaacc accgcgcggg gagtaatcgt cgcgccggtg
     3781 aactggtcga aatcaccacc atctttcttc actgcccagt gcgcatcatc cgcaccactg
     3841 attttttttc ccgcaaaatg ggtgatccag tcagaaaggc gtagttcgat tttatcgcca
     3901 agccctggtg tttcgtggtg ctctgtcacg cgcgtgccaa gtaccgtgcc gttaaaatcg
     3961 gctcccacca gcagctgaat cgcaccggaa tagccatctg gcgcggttgc ttccagaacg
     4021 gcggctaccg gtttgtcatc ctgtttggcg atgtaaaccc gatgctcacc tttacctaac
     4081 tctggcgcag tgaccagata gcaactctgt gccagcgcat tgttatagcg ttcggctggc
     4141 agcacctgat caaataacgc cttttgttgc agactggcct gttcagcaat cgtcgttttg
     4201 gtcatctggt tgatggccgc agttaaccct gttgaacccg ctgcaaatag cgccaacgta
     4261 atgccgtgtt ttcggatagt tttcagcatg gtttaccctt tgcgatggcc gtagacgcgc
     4321 ggacgcgtgt agtaatcgat cagaggaacc gtgatgttcg ccagcaggac ggcaaaagcc
     4381 acgccgtcag gatagccgcc gaaacagcgg atcaaccaga ctaataagcc cgccagcgcg
     4441 ccgaacatca gacgaccacg attggtcgta gaagcagtaa ccgggtcagt caaaataaag
     4501 aatgcgccga gcatagtcgc accagacagc agatgaattt gcggtgatgc cagtgtttct
     4561 ggtgagaaca accagcccaa cgttgcgcat aacgccagcg ttactaagaa gctgagggga
     4621 atatgccagc gaatcgcttt ctgccatagc aaccacacgc cgccagccag ccaggcgaga
     4681 tttacccatt gccaaccagc gcccgccaga ataccggtgt agatcggata ttgcataatc
     4741 tgttcaaccg aatgacctgc gcggacagag gttttaaatg tatccagcgg tgtcgcctga
     4801 ctaatgccat caatacctaa gcgtagcgtg ttcatatcac caccactggc ggtatgaccg
     4861 ctgaaaataa cctgtatggc gtcgataaaa ctagggatgt tgaccgcaat gtcatgcggc
     4921 ggtaaccagc tggtcatctg caccgggaag gagatcagta agaccacata accaatcatt
     4981 gccggattaa acgggttttg ccccagaccg ccatacaact gtttagcgat gatcaccgca
     5041 aacactgtac ccagcacgac catccaccac ggcgcgaggg ggggaatact taccgccagc
     5101 aataagcctg tcagcaatgc tgagttatct ttcaacgtgg cggctaccga ctgtttgcgt
     5161 agtttgagta cgagagcttc ggctaacaga gcactgaccg acgccaacag gatctgaacg
     5221 agagtacccc aaccaaaaaa ccacagttgc gctgcgattc ctggcacggc tgcgagcaac
     5281 accaacagca taatgcgcga tgtctggcgc tggttatggg tataagggga gctagctatt
     5341 ctgaatacca tttagtcctc gtttacaacc ttttgctggg cggctttttt ggcctgaacg
     5401 cgggcaatag ccgcggcaac tgccgctttg cgcggatcaa cctgttcttc tggttctgcg
     5461 ttagcctgtt gctgttccag cttgcgtgct ttggcgcggg caatagccgc ttcgacggca
     5521 gctttgcgcg gatcaacctg ttcttctggc tccgcattag cctgttgctg ttccagtttg
     5581 cgcgctttgg ctcgggcaat agcggcttcg atggcggctt tgcgcggatc aacctgttct
     5641 tctggttccg cattagcctg ttgctgttcc agcttgcgcg ctttggcacg ggcaatagcg
     5701 gcttcgacgg cggctttgcg cggatcgacc tgttcttctg gttccgcatt agcctgttgc
     5761 tgttccagct tgcgcgcttt ggcgcgggcg atagctgctt caacggcagt tttacgtgga
     5821 tcagcaacgg ttgctgcgtc gttagtttgc tgcagttctg cctgtttcgc tctggcttgc
     5881 gctttacggg cttcccgtgc tgcaataatt gcactgttat ccgggcgttc gcccgcttta
     5941 atcacaatag gctgtgtagc ctgggcctgt ttctctttca cccgcgccag agcggcagca
     6001 atcgcatctt tatctttggc tgcaggttga acggctgcgc tcttatgtcg ttcaaggcga
     6061 gccgcttttt cgcgctccag acgagcctgg cgcgcttcga aacgcgcttt ggcttctgcg
     6121 gcgcgctttt cttcctgacg aatagccgca atttcagctt tttcctgacg gaaatattgc
     6181 accaggggaa tattgctcgg gcaaacccac gcgcaagccc cacattcaat gcaatcagca
     6241 atgttatgcg tggtagcttt atcgtgttgc tgacctttgc tgaaccagta caactgttgc
     6301 ggcaaaagat ccgcagggca ggcgtcagca caggcgctac accggatgca gctttgttct
     6361 tcctgtggtt cgccaagttc attggcagag ggagccaaca gacagttggt aatctttacg
     6421 accgggacat ccagccatgg caaggtaaag cccattagcg ggccgcccat aatcaccatt
     6481 tgatcggcag aggggcagaa tccggcatca ttcaataaat gacgcactgg cgtccccagc
     6541 cgtgcccaga cgttgcccgg gcgagcgatt gcttcgccag tcagggttac aacacgctcg
     6601 gtaatcggct cgccatcaat aacggcacgt ttcactgcat aagcagtgcc gacgttttgc
     6661 attaatacgc cgatatcgga tgaacgcccg ccatgtggaa cctgcttccc ggtcagaatg
     6721 taggttaatt gtttagcacc gcccgaagga tatttggttg gaatcacccg cagagaaata
     6781 tcgttagagt ccgccagcac cgcgcgcagc atggaaatcg cctgcggttt gttatcttca
     6841 atgccgataa gaatttcgcg tggctgcaga atatgcgcaa gaatgcgaat accctctacg
     6901 acctgagccg cgcaatcctg catcaaacgg tcatcggcgg taatgtacgg ctcgcactca
     6961 gcagcgttga taatcaacgt ttcaatctta tctccgccac cctgcaattt aacgcctgtc
     7021 gggaatcccg caccgcccag cccggcaaca ccaaactgat gaatgcgctc gattaactct
     7081 tcgcgacgga gagagcgata gtcggcccag ccgtcgcgcg ggatccagca gtcttcacca
     7141 tcggcatcaa taatcacgct taattcagct aaagctgaag gatgagccgt agagtggcgc
     7201 gcaatagccg taacggtacc cgaggtgggc gcgtgaacag gcagcatttt gccgcgacca
     7261 cgggtaagtg gctggccgcg caatacttta tcgccgacgc taacgcacaa ctcaccttca
     7321 gcgccaatat gctgtttcag tggaataaca aaacgctgcg ctaggggtac ctggcgcagg
     7381 ggtgtaccgt tggactgggt tttcatctcc ggtggatgga tgccgccgtt gaaatcccag
     7441 attttatttt ttctgaatgc agagaataaa ttaagcatgg tgttccacgg gaatgatacg
     7501 cacaggaatg gtgttcagat cccatttcca ggagtcaggt gtttctgcga ccggttgcaa
     7561 cgagatgcag tgcgtcgggc acggatcaac acataaattg cagcccgtac agagatcact
     7621 cattaccgta tgcatggcac gggtagcgcc aacgatggcg tctaccggac acgcctgaat
     7681 acatttagtg cagccaatac agttattttc atcaataacc gccaccatcc gcgcaggcgt
     7741 tatctcttgc gcttcgccat ccagcggctg cggctcgaca ttaagcaact cggcaatttt
     7801 tagcatcaca gcttcgccac ctggggcgca acggttgatt ttttcaccgt tacagctgat
     7861 ggcttccgcg taggggcgac agccgggata accgcactga ccacactggc tctgcggtaa
     7921 gatttcgtca attttctcaa cgaccggatc gtcttccacc gcaaaacggc gggaggcata
     7981 acccagaatg gcgccaaacg ccaggcccag caggctcacg gcggcaacgg caatccagat
     8041 agcattcatt acaacttcac caaaccacta aagcccataa aggccagaga cataagacct
     8101 gcggtaatta acgcaatggc attaccgcga aaaggtgccg ggacatcagc cacagcaagg
     8161 cgttcgcgga tggcggcgaa gagcaccatc accagcgaga aaccgacagc ggcggaaaaa
     8221 ccgtacagcg ccgactgcaa gaaattgtgc ccgagattga tattcagcaa cgccacgccg
     8281 agcactgcac agttggtggt gataagcggc aaaaaaatcc ccagcagacg gtaaagcacc
     8341 gggctggttt tgcgcaccac catctcggtg aactgcacga ccacagcaat caccagaata
     8401 aatgccaggg tgcgcaggta aatcagatta agtgggatca aaatccacgt atcgataagc
     8461 caggcgcaaa tagacgccag cgtcatcaca aacgttgttg ccagccccat gcccatcgcg
     8521 gtttccagct ttttggaaac ccccataaac ggacagagac cgagaaactt gaccagtaca
     8581 aagttattga ccagtacagt tccgacaaac agtaacaggt agtcagtcat ttttcggcct
     8641 gaaataaaaa agccgcctat tatccgttaa tccagagcag gcgacaacag gttaactgta
     8701 aggttattac ggattcacaa acgtcgcttt cacccgcgac gagcgtttga aataggggac
     8761 gatcaatgcg gttgccaaca aagtaaacag caactggcga acggctatgc catcttccac
     8821 gggtgaaaaa gcgaacgctt ttactgccag caatacggaa ataagcagcc agataatata
     8881 gtgtttagga acacaacgcc gacgtttaaa gaaagcgatg gttaaccaca gtgtgtaata
     8941 ccacatggcg atagcggtaa taaaagaaac gccccataag atttgtgtcg tcagtgcttg
     9001 tccgccgagc gtttgaaatg tttgcggaga agataacgca gcggtataca gcaacaacgc
     9061 cagcgtcgta cttaacagag cgactaaaag ccaggccaac gggccaagca accagcctcc
     9121 aatacgttgt ggcgttgtgg tggtcatagg ttctccagaa tagcgacgca aacaggcaaa
     9181 tctaatttta ggggcgttat tataaggctt ttataaccga tcgctacttt ctttattgga
     9241 catagtgcca gacggacttc ggtacctggc cgaggtcaaa caaacgcccg ccagaaacca
     9301 gctctgcgcg acggtgatcg gcagcacgat acatattgat cagttcctga tcgtccgtca
     9361 gggtgtaatt aagatggtcg tagagttttt ccagactttc gagtgaactg attttgcgaa
     9421 attttaataa gtagtcctga acagtcataa aaggtccata aaataattaa taccaaaggg
     9481 gtgggtatta ttagtgatga taaaatttca ccaaagtgaa cgcttgtgtt attacaataa
     9541 taagaatgcg ctgatggcaa atattcaggg atgaaaaact gctctgaaaa gagtaacgcg
     9601 ctttactatc cctgacaatc accaacaaca tcgaacaaga taataaattc ctggtttaat
     9661 atccgacaag tgaaaacatg cacctggacg ggccgcatgg cgctctacaa gctcagagct
     9721 tacttgtgtt gtaccgtagt actctgttca ggtggctgat agttgtcaat gtgactcgcc
     9781 acgtcaagaa gaatgactga aacgacaaga acgatccaac ctgttaattc aataagacga
     9841 ttcattacag cccacatctc tgttgattga tccattaact tcagggagta aatgttactt
     9901 agcaataata gctccagcaa gatttttact gaggtttttg cgatatttag cttttgtcgt
     9961 tggaaaattc gctatttttt tgacttaagt taaacaacat cccttattgc tggcaggtta
    10021 ttaaactgtt gagcgagggt aaaggatagt gtcaaatagc catcatactt taatgagagg
    10081 caatgacatg agcgacaaca tccgtgttgg gttgattggg tatggttatg cgagcaaaac
    10141 tttccatgcg cccctgattg cgggcacgcc cgggctggaa ctggcggtaa tctccagcag
    10201 tgatgaaaca aaagtaaaag ccgactggcc aacggttacg gttgtctctg agccgaagca
    10261 tctgtttaac gatcccaaca tagacctgat tgtcattcct acacccaacg atacccattt
    10321 cccgttagcc aaagcggcgc ttgaggcggg taaacatgtg gtcgttgata aaccctttac
    10381 cgtgacactg tcacaagcgc gagagctgga tgcgctggca aaaagcctgg ggcgtgtgct
    10441 gtctgtattc cataaccgtc gttgggatag cgatttcttg acgctaaaag gtttgctcgc
    10501 ggaaggcgtg ctgggtgaag ttgcttactt tgagtctcat tttgaccgct tccgtccgca
    10561 ggtgcgcgat cgttggcgtg aacagggcgg cccaggcagc ggtatctggt acgatttagc
    10621 accacatctt cttgatcagg ccattacgct atttggttta ccggtcagca tgacggtaga
    10681 tttggcacag ttacggcccg gagcgcagtc gaccgattat ttccacgcca tcttgtccta
    10741 tccacagcgg cgagtcattt tacacggtac catgctggca gccgctgagt cagcacggta
    10801 tatcgtgcat ggatcccgag gcagttatgt gaaatatggc ctcgatccac aggaagaacg
    10861 tctgaaaagt ggcgagcgtc ttccgcagga agactggggc tacgatatgc gtgatggcgt
    10921 acttacccgc gtggaaggtg aggaacgtgt cgaagaaacg ctgttgacgg tgcctgggaa
    10981 ttatccggct tactatgcgg cgattcgtga tgcgttaaat ggcgatggtg aaaatccggt
    11041 tccggcaagc caggcaatcc aggtaatgga gttgattgag ctgggcatcg aatccgccaa
    11101 acatcgcgcg actttgtgcc ttgcgtgaaa aatggatggt gcaatttgca ccatccattt
    11161 ttgttacttc gcagcgactt tttctcgcag tgcgcgtttt tcctctgcgc tgaggaaagc
    11221 catttccaga ccattaatct gtgcctggcg gatttgctca cgggataacc cagcagccgg
    11281 cgcggcaacg gtatattcgt gaatgatatc cactccctgt acgccgggat cgtcagtgtt
    11341 aatgctggct cgaatgccat gctcaaggaa cgttttcagc ggatgtgcag ccagctctgc
    11401 tacggtgctg gtctgaatat tggaggtcag acaggattca ataccaattt tttgctcggc
    11461 gagaaaatcc atcagcgccc gatcttcaat ggcttttacg ccatgtccaa tacgctccgc
    11521 acccagttca cgaatcgcct gccagatgct ttccggcccg gcagcttcgc ctgcatggac
    11581 ggtaatatgc cagcccgcat cacgcgcgcg gttgaagtga gaaaggaaca gacttcccgg
    11641 gaaaccaagt tcatcaccgg ctaaatcaag tgcggtaatc tggtcacggt gggctaaaaa
    11701 ggcctccagc tcttgctgac aggcggcttc gccgaaggtt cggctcataa tgccgataag
    11761 cttcgcctgc acaccaaagg tgcggcaacc ttcacgtacg ccatcgatca ccgcttcgac
    11821 aacacccgcc acaggtagct gatgtgccat tgccatgtag cctggtgaaa aacgcagctc
    11881 gacatagtgc aggccgtgac gggctgcatc ttcaatgttt tcaaatgcta cgcggcggca
    11941 ggcatcaaga gaggagagaa ctttaacgcc ccagtcaagt ttggtcagaa agctcaccag
    12001 atcgggttcg ttggcaatga cctgaacgtg gggaatcagt gtttccaggg agtgtgcagg
    12061 aagcgagata ttatactggc ggccaagttc aagaatggtc tggggacgaa tgttgccatc
    12121 aaggtggcga tggatatcag ttaatggcag ggtggtatca atcatggtcg cactcttttt
    12181 ctgaatataa aagtgcgcac cattataaaa acaaagcagg gtaaaaatcc acgattgcgc
    12241 aacgattttt tacgttgcgc aattggggtt agcgaacagc gcggatggcg tttattaatc
    12301 cagccacacc tttttccagt ttcgaacgtg ggcagccggc attgagacgg acaaaaccac
    12361 gaccttcttc accataggta taccccggca tgatcgcgac cttctcttgc tcgataagca
    12421 ctttttgcaa cgcgttgtcg tcaatattca acggacgtaa atcaagccat gccagataag
    12481 tggattgtgg gagctgccag ttgagttcag gaaacgcggc gttcatttta tctgcgatat
    12541 acgtcaggtt atctttcaga tagatgcgta aggcatccag ccacggcgcg ccttgctgat
    12601 aggcggcgat atgggcagtt aacgccagta ccgaagggga agaaagccca tcacggcctt
    12661 tcagtgccga taaataggca tcgcggctac tgctattttc tataatcccg taagcaccgg
    12721 tcagggcggg aatattgaaa cttttcgagc ccgacgttag caacgcccag tctccgcgag
    12781 ccacattact ccagggaata tgcggctgct cgccccaaac catatccata tggatttcat
    12841 cggaaataac ccgcacacca tgacgctcgc acaggtcagc catgatctcc agctcatcgc
    12901 acgtccacac tttcccggta ggattctgtg ggctacacag gagcataatt ttacattctg
    12961 gtttcgccaa cacggcttcc agcttgccca tatcgcaaaa ccagccgtca gcctgcttct
    13021 ctaaagcaac gggcattact gtgcgctggt taccttcaat ggccttgtaa aatgcgtcat
    13081 aggcgggcgt gtggatcacc acgccttcac ctgtttcaga ccactgacga atcagttctg
    13141 aaaccatata gatgacagaa gggccataca ccaccgtctg cgtatcaatt gcggtgtaat
    13201 gctgggtgga aaaccagtgg gcaatagccg cgagaaactc atcgtttttc cagcggctgt
    13261 agccaaatac gccgtgcatc aggcgctgat tcagcgcctc gataatgcag ggggcagtgg
    13321 caaaatccat gtctgaaatc gtgaacggta acaggtcagc agtgccgaaa cggtcagcga
    13381 cataatccca ttgtgtacac catgtgccat gacgatccac gacctttgaa aaatcgaaca
    13441 tatcttatcc ttatgcctgg acagtatgca tcagaccggc catttcatct tttactgact
    13501 gaacttgtgg cccgataaca acctgcaggt tatgttgatt aagttgtact acgccaattg
    13561 cccgattgtc cttcagtgcc tgcacattaa caagcgacat atctttcaca gacaaacgca
    13621 gacgggtaat gcagttatcg aggctgacaa tattgtcggc accgcctaat gcttcgagga
    13681 ttgcaggaac gttgtaacct gatttacccg gcgcaccggc aacggctttt tcgattgagc
    13741 tggcaacttc gctatcgcgc cccggggttt tcagattgaa gcgggtgata gcgaaacgga
    13801 agatgacgta gtaaacgaca aaccagattg ccgccaccac tggcaccatg taccacttgg
    13861 ttgacagacc atgcaaaata ccgaacacca cgaagtcgat gatattgccg tcagtattac
    13921 cgatggtgac gccgagcaca gacatgacgg tgaagccgag gccggttaac agcgcgtgga
    13981 tgacatacag aactggcgct acgaacagga acaggaattc cagcggttcg gtcgtgccgc
    14041 caacgacaca ggcgatcagg ccagaaatca gcagcccttt aattttatgg cgattttccg
    14101 ggcgcgcgca gtgatacatc gctaacgctg gactggcatg aacttcggtg aaaaaccgca
    14161 gcagggaggc aaacaatgaa tcaacaactc tcctggcgca ccatcgtcgg ctacagcctc
    14221 ggtgacgtcg ccaataactt cgcctttgca atgggggcgc tcttcctgtt gagttactac
    14281 accgacgtcg ctggcgtcgg tgccgctgcg gcgggcacca tgctgttact ggtgcgggta
    14341 ttcgatgcct tcgccgacgt ctttgccgga cgagtggtgg acagtgtgaa tacccgctgg
    14401 ggaaaattcc gcccgttttt actcttcggt actgcgccgt taatgatctt cagcgtgctg
    14461 gtattctggg tgccgaccga ctggagccat agcagcaaag ttgtatatgc atatttgacc
    14521 tacatgggcc tcgggctttg ctacagcctg gtgaatattc cttatggttc acttgctacc
    14581 gcgatgaccc aacagccaca atcccgcgcc cgtctgggcg cggctcgcgg gattgccgct
    14641 tcattaacct ttgtctgcct ggcatttctg ataggaccga gcattaagaa ctccagcccg
    14701 gaagagatgg tgtcggtata ccatttctgg acaattgtgc tggcgattgc cggaatggtg
    14761 ctttacttca tctgcttcaa atcgacgcgt gagaatgtgg tacgtatcgt ggcgcagccg
    14821 tcattgaaga tcagtctgca aaccctgaaa cggaatcgcc cgctgtttat gttgtgcatc
    14881 ggtgcgctgt gtgtgctgat ttcgaccttc gcggtcagcg cctcgtcgtt gttctacgtg
    14941 cgctatgtgt taaatgatac cgggctgttc actgtgctgg tactggtgca aaacctggtc
    15001 ggtactgtgg catcggcacc gcttgtgccg gggatggtcg cgaggatcgg taaaaagaat
    15061 accttcctga ttggcgcttt gctgggaacc tgcggttatc tgctattctt ctgggtttcc
    15121 gtctggtcac tgccggtggc gttggttgcg ttggccatcg cttcaattgg tcagggcgtt
    15181 actatgactg tgatgtgggc actggaagct gataccgtag aatacggtga atacctgacc
    15241 ggcgtgcgaa ttgaagggct cacctattca ctattctcat ttacccgtaa atgcggttag
    15301 gcaatcggag gttcaattcc tgcctttatt ttgggattaa gcggatatat cgccaatcag
    15361 gtgcaaacgc cggaagttat tatgggcatc cgcacatcaa ttgccttagt accttgcgga
    15421 tttatgctac tggcattcgt tattatctgg ttttatccgc tcacggataa aaaattcaaa
    15481 gaaatcgtgg ttgaaattga taatcgtaaa aaagtgcagc agtaattaat cagcgatatc
    15541 actaattaat attcaataaa aataatcaga acatcaaagg tgcaactatg agaaaaatag
    15601 tggccatggc cgttatttgc ctgacggctg cctctggcct tacctctgct tatgcggcgc
    15661 aactggctga cgatgaagcg ggactacgca tcagactgaa aaacgaattg cgcagggcgg
    15721 ataagcccag tgctggcgcg ggaagagata tttacgcatg ggtacaggga ggattgctcg
    15781 atttcaatag tggttattat tccaatatta ttggcgttga aggcggggca tattatgttt
    15841 ataaattagg tgctcgtgct gatatgagta cccggtggta tcttgatggt gataaaagtt
    15901 ttggctttgc cctgggggca gtaaaaataa aacccagtga aaatagcctg cttaaattag
    15961 gtcgcttcgg gacggattat agttatggta gcttacctta tcgtattccg ttaatggctg
    16021 gcagttcgca acgtacatta ccaacagttt ctgaaggagc attaggttat tgggctttaa
    16081 cgccaaatat tgatctgtgg ggaatgtggc gttcacgagt atttttatgg actgattcaa
    16141 caaccggtat tcgtgatgaa ggggtgtata acagccagac gggaaaatac gataaacatc
    16201 gcgcacgttc ttttttagcc gccagttggc atgatgatat cagtcgctat tctctggggg
    16261 catcggttca gaaagatgtt tccaatcaga tacaaagtat tctcgagaaa agcataccgc
    16321 tcgacccgaa ttatacgttg aaaggggagt tgctcggctt ttacgcgcag ctcgaaggtt
    16381 taagtcgtaa taccagccag cccaatgaaa cggcgttggt tagtggacaa ttgacctgga
    16441 atgcgccgtg gggaagcgta tttggcagtg gtggttattt gcgccatgca atgaatggtg
    16501 ccgtggtgga taccgacatt ggctatccct tttcattaag tcttgatcgt aaccgtgaag
    16561 gaatgcagtc ctggcaattg ggcgtcaact atcgtttaac tccgcaattt acactgacat
    16621 ttgcaccgat tgtgactcgc ggctatgaat ccagtaaacg agatgtgcgg attgaaggcg
    16681 cgggtatctt aggtggtatg aactatcggg tcagcgaagg gccgttacaa gggatgaatt
    16741 tctttcttgc tgccgataaa gggcgggaaa agcgcgatgg cagtacgctg ggcgatcgcc
    16801 tgaattactg ggatgtgaaa atgagtattc agtatgactt tatgctgaag taagaaataa
    16861 cgccggagag aaaaacctcc ggcgtttcag attgttgaca aagtgcgcgt tttttatgcc
    16921 ggatgcggcg taaacgcctt atccagccta caaaaactca taaattcaaa gtgttgcagg
    16981 aaaaggtagg cctgataagc gtagcgcatc aggcaatctc tggtttgttt tcagatgaaa
    17041 acgccggagt gaaaattctc cggcgttttg gccgtgaatt actgctgcgg aattgccggt
    17101 acagccggaa cgttaagagc tggcatcgca aacatgccaa caaaatcttc taacgacatt
    17161 ttctgcccat ttaacgttat ctgaccgtta gcatattgca ggctggtggt gatggtattg
    17221 tcctgcaagg tggtcagacg gaacatctgc cccattgctg atgcaccttc aacttgctgt
    17281 ttcgccagtt ttttcgcttg atcttcctga taaccttcca gcttcgctac ctgagtcata
    17341 aactcagttg ccatatccac cggaatggtc agtttcgcat ccagagattt aaccgaacga
    17401 tctacttcct gcgccagcgt ttgcggcgct tctttagtcg ttgtcggatc tttcaggaac
    17461 agcgacagat tcagcgcact ttcaccctga ctgtttttcc agcttagcgg cgcgacagta
    17521 atcaccggat cgcctttcag catcagcggc agggcgctaa agaaggcttc cgtcactttc
    17581 tcctgataaa gttcgggact gttggcaatt tctggctgtg ccagcagcgc ctgagtttgc
    17641 gcgttatatt gctggctaaa ctgatgccag gcttcaccat caatctggcc gacttttaaa
    17701 gtcagcttgc cgctgcccag atcctgattc tgtaccttca ggctgtttag cgagtaatcc
    17761 agttggctat tgatcgtttt accgtcattg accagatccg atttaccgct gatctccatg
    17821 ccttccagca gtgccagttc tttgccttcc actgaaatgg tcattttttc cagtgacagt
    17881 ttttggtttc ctacgcgctc accaaaactt gccagcgtgc tggaaccgtc ggttttcaga
    17941 ttattaaagg tcaactgcac tttctggttg tattcgttaa ctgcgtctat ccgaccactt
    18001 tgcgcctccc cggaaaggga gatggctttg ccgtctctgt cagcatttaa ctggaactcg
    18061 ccgccgctaa aggcgacttt ttcatccttt tgctcgtaat tcagtggctt gagcgaaata
    18121 tcggaactgg aatcaccgct gtaaccaatg cgcgagttaa tctcaaaagg cgtttcacct
    18181 tttgccatat caaacagtgg tttgcttact tcgttattaa ccagcgtggt ttgaattgat
    18241 gccatcgacg ggatcaggtt cagtttttta agctgggcaa gcgggaaggg accatgatca
    18301 accgattcgt tgaagatgac gctctgaccg cttttaatcc acggattttc tttcccggca
    18361 atgggtttca ccaacagttg caactggctg ctgaatacgc cgcgatgata gttttgataa
    18421 ctcacttcca ggttggattc aggagctgtc agtttgagtt gcgcgttcgc ctgcgcgacc
    18481 atgtcttcga gatggggttc aatcttcttg cctgtatacc atgcgccgcc tgtccagact
    18541 atgcctagcg caacaatgac gcctaccgct accagcgatt tattcataat gattatccat
    18601 aaaatgaaat caggcggact ggccgcctga aggtgttata agcctttaat aagcttagca
    18661 agagatgtta attttttcag taagctctta cagcttgttg taaacacgcg ctaaacggcc
    18721 gtggcctttg acagtcaccg gtgattcgtt ggcggcaata aacgctgatt cacccggttt
    18781 aagctgtaac tgctgagaac ctttccacaa cgttgcatcg ccttcgacgc agaacaaaat
    18841 ggcggcactc tgctggctaa tggtggtttc tttatcacta aggtcatgca gcgagaaggc
    18901 aaaatcatcc actggaatcg ggaagtccag ttctgcacct tgtttcaccg gctgggtcaa
    18961 caactggtta gccggtttgg cttcgaactt cacattggca accagttccg gaatatcaat
    19021 gtacttaggc gtcagacccg cacgcagcac gttatcggag ttcgccatca cttccagcgc
    19081 cacgccttgc aggtaagcgt gcggtgtttc agcgaacagg aacatcgctt cgccaggatt
    19141 caatttcacc acattcagca atagtgggga gaacagaccg ctgtcttccg ggtaaaattc
    19201 agaaattaaa cgaatcgttt gccacggttc accctgctgg ctatcgaggg tcgattttaa
    19261 aatcgccagc gcgcgggatt tttcttcacc ctgcatattc aacaggctgg cgaacagttc
    19321 gcttaaatgt tcggcatgtg gctgttgtaa aaagtgagca attgccggat gtgcacctgc
    19381 gactggctgg agtagggaga caatctcgga aaattcacga aacgcgttca tcgcaaggaa
    19441 aggcgtcagc gcaaaaacca gctccggctt gtggttagga tctttatagt tacgctcggc
    19501 ggcatccatc gggatacctg cggcattttc tttggcaaaa ccgatttcag aattgtgttt
    19561 gtttggatga acctgaatgg agagtggctg tgctgcgcat aatactttga acaggaaagg
    19621 cagttcgcca aagcgtttgg caacggcctc tccgagcaga gtcgatttat cactctcaat
    19681 cacatcacgc agtgaaacga tatctccggc ggcattctgc actcgtgaac tgcttttcgg
    19741 atgtgcgccc atccacagct cggccatcgg ctggctggac ggattttcca taccataaag
    19801 ttcagtcaac gccgttttgc tgccccaggc atagttttgc actgagttaa tgagtttttg
    19861 catgatcaat ccctgtttta atgtggaaat taatcccgct attaaagcaa gaatcctacg
    19921 ggaagtaacc tggagccgca aaaagtcgta ctagtctcag tttttgttaa aaaagtgtgt
    19981 aggatattgt tactcgcttt taacagggca acggaacacc cgcccagagc ataaccaaac
    20041 taggcagtaa gtgagagaac aatgtcaaac aaaccctttc attatcaggc tccttttcca
    20101 ctcaaaaaag atgatactga gtattacctg ctaaccagcg aacacgttag cgtatctgaa
    20161 tttgaagggc aggagatttt gaaagtcgca cccgaagcgt taactctgtt ggcgcgtcag
    20221 gcgtttcatg atgcgtcgtt tatgctgcgt ccggcgcacc aacaacaggt ggccgacatt
    20281 ctgcgtgacc cggaggccag cgaaaatgat aaatatgtgg cgctgcaatt cctgcgtaac
    20341 tccgacatcg cggcgaaagg cgttctgcca acctgtcagg ataccggcac cgcgattatt
    20401 gttggtaaaa aagggcagcg tgtatggacc ggtggtggtg atgaagcggc gctggcgcgc
    20461 ggtgtctata acacttatat cgaagataat ctgcgctact cgcaaaacgc gccgctggat
    20521 atgtataaag aggtgaatac cggcaccaat ctgccagcgc agatcgatct ttatgccgtt
    20581 gatggcgacg agtacaaatt cctctgtatc gccaaaggtg gcggttcggc aaacaagacg
    20641 tatctctatc aggaaaccaa agcgttacta acgccgggga aactgaaaaa ttacctggtt
    20701 gagaagatgc gcacgctggg tacggcggcc tgtcctccgt atcatattgc gttcgttatt
    20761 ggtggaactt ctgcagaaac aaaccttaaa acggtgaaac tggcttccgc taaatactat
    20821 gatgaactgc caacggaagg gaatgagcac ggacaggggt tccgcgatgt ggaactggaa
    20881 aaagaattgc tgatcgaagc gcaaaatctt ggtctgggtg cgcagtttgg cggtaaatac
    20941 ttcgctcacg acatccgcgt gattcgcctg ccacgtcacg gcgcatcctg cccggttggt
    21001 atgggtgttt cctgctctgc tgaccgtaat atcaaagcga agatcaaccg tcaggggatc
    21061 tggatcgaaa aactggaaca taatccaggt aaatatatcc ctgaagagct gcgtaaagcg
    21121 ggagaaggcg aagcggtgcg cgttgacctt aaccgtccga tgaaagagat cctcgcacag
    21181 ttgtcgcagt atcccgtttc tacacgctta tcgcttaacg gcacgattat cgtcggtcgt
    21241 gatattgctc acgccaaact gaaagagcgg atggataacg gtgaagggct gccgcagtac
    21301 attaaagatc atccgattta ctacgcgggt ccggccaaaa cgccggaagg ttatgcctcc
    21361 ggttctcttg gcccaacgac cgccggacgg atggattctt atgtcgatca actgcaagcg
    21421 cagggcggaa gtatgatcat gctggcgaaa ggcaaccgca gccagcaggt gacggatgcc
    21481 tgtaaaaaac acggcggctt ctaccttggc agtatcggtg gtccggccgc tgtattggcg
    21541 cagggaagta ttaagagcct ggaatgtgtt gaatatccgg aactgggaat ggaagccatc
    21601 tggaaaattg aagtggaaga tttcccggcg tttatccttg tggatgataa aggaaatgac
    21661 ttcttccagc agatacaact cacacagtgt actcgctgtg tgaaataaac agagccgccc
    21721 ttcggggcgg tttttttaca tggcacgaaa gaccaaacat ttgttatcaa atagtaaata
    21781 ataagtgagc taaaagttgc ttaacgaaag caaaacagaa agaaaaaatt aatcaggtga
    21841 ggagcaggcc atgaatacag tacgcagcga aaaagattcg atgggggcga ttgatgtccc
    21901 ggcagataag ctgtggggcg cacaaactca acgctcgctg gagcatttcc gcatttcgac
    21961 ggagaaaatg cccacctcac tgattcatgc gctggcgcta accaagcgtg cagcggcgaa
    22021 agttaatgaa gatttaggct tgttgtctga agagaaagcg agcgccattc gtcaggcggc
    22081 ggatgaagta ctggcaggac agcatgacga cgaattcccg ctggctatct ggcagaccgg
    22141 ctccggcacg caaagtaaca tgaacatgaa cgaagtgctg gctaaccggg ccagtgaatt
    22201 actcggcggt gtgcgcggga tggaacgtaa agttcaccct aacgacgacg tgaacaaaag
    22261 ccaaagctcc aacgatgtct ttccgacggc gatgcacgtt gcggcgctgc tggcgctgcg
    22321 caagcaactc attccgcagc ttaaaaccct gacacagaca ctgaatgaga aatcccgtgc
    22381 atttgccgat atcgtcaaaa ttggtcgtac tcacttgcag gatgccacgc cgttaacgct
    22441 ggggcaggag atttccggct gggtagcgat gctggagcat aatctcaaac atattgaata
    22501 cagcctgcct cacgtagcgg aactggctct gggcggtaca gcggtgggta ctggactaaa
    22561 tacccatccg gagtatgcgc gtcgcgtagc agatgaactg gcagtcatta cctgtgcacc
    22621 gtttgttacc gcgccgaaca aatttgaagc gctggcgacc tgtgatgccc tggttcaggc
    22681 gcacggcgcg ttgaaagggt tggctgcgtc actgatgaaa attgccaatg atgtccgctg
    22741 gctggcctct ggcccgcgct gtggaattgg tgaaatctca atcccggaaa atgagccggg
    22801 cagctcaatc atgccgggaa aggtgaaccc aacacagtgt gaggcattaa ctatgctctg
    22861 ctgtcaggtg atggggaacg acgtggcgat caacatgggt ggcgcttccg gtaactttga
    22921 actgaacgtc ttccgtccgc tggtgatcta taatttcctg caatcggtgc gcttgctggc
    22981 agatggcatg gaaagtttca acaaacactg cgcagtgggc attgaaccga atcgtgagcg
    23041 aatcaatcaa ttactcaatg aatcgctgat gctggtgact gcgcttaaca cccacattgg
    23101 ttatgacaaa gccgcggaga tcgccaaaaa agcgcataaa gaagggctga ccttaaaagc
    23161 ggcggccctt gcgctggggt atcttagcga agccgagttt gaccgctggg tacggccaga
    23221 acagatggtc ggcagtatga aagccgggcg ttaatctgca acatacaggt gcagccgtgg
    23281 aatgatcaaa cgaagcggct gcgcctgtgg tttataacgg tgctgcacat tgtcggcatc
    23341 gtaatttaac aactcaccaa cgtccggcac gcccgcgcca ttatcccgat taatcagtgc
    23401 aatcagcggc gtagggcagg cgtgttgtac ttgtttttga tctcctttgt accagacgcg
    23461 ggcaatcggc tgcaccttca ccggacgttt gatttttaac ttcgcgtcct gtggcagggc
    23521 cgcgatatcc tgatactctc gctccagttt tctttgccac tcctcgcgcg tccacggtgc
    23581 gacactgcgt ggtgatttca ggcttttttc cagctgtgcc aggacttcat cacgatgcaa
    23641 atttttaatg atatgtttat tagcccagcc aaaacgtaaa gtggcggggt cgtgcagaac
    23701 ggtgagcgtg cggtaggcat taagggtgat cagccccggc aaatgacgat gcacccattc
    23761 aaaacgtgcc gcggtgggga gttctgattc aaccgtgaca atatgctcga acgtggtctt
    23821 gagtttattg atgtgctgaa tatgactgac caacgctgct tgcgaaaggt tatcgacctg
    23881 gtaacacaac acgccaggca gacggacagc ggccttgctg ctgcgatttt cggactgttg
    23941 ttgaataaat aaatggcgga aatgacgcaa cgccagcgac tgcgcgtcgt tgccgagatg
    24001 ttgttttacc tcaatacgat taagcggatt atgctcatcc tcttttttta cctccggcaa
    24061 agagaacacg cgggcaacca atagcttgtg ttgctcaaga tgagcggcaa atgtagccag
    24121 ctcttgttcc atctggcgaa aggtagtgtt gagtcggtct acgagatcgt aacgcgccat
    24181 aatattaacc actttagtta caacatactt attttatagc acagtggtgg tgacttgacc
    24241 accgtgcgcg tagtgtcaag cagaggtaaa ttgcgggatg ttatgccata acggccagct
    24301 aaacgagaag cgggcaccac ccagttcgct ggtgtcacaa ttaactgtac cgcccattgc
    24361 cagtgctata gagtggacaa ttgccagccc cagcccgcag ccgccggttg agcgatcccg
    24421 gctgggatcg aggcgaacaa aaggttcaaa gatatgttcg cggttttctg gggcaatccc
    24481 tgggccatca tcctcaacaa ttaatgtcgc tctattcccc gacagtagca ggctggtttc
    24541 aaccgttgaa tgacagtagc gcagggcgtt attgagcaaa ttatccagca cgcgctccat
    24601 taagcgcata tccaacgccg cataatggcc ttgcacgagc gtttttatcc gtaccgtttt
    24661 atcgggcgtt actgcctgaa tgtctgccag atgcgttgac agccacaacg gcaggtctgg
    24721 ttcgctaaga tgaagctcgt tttgtgggcg atcgagtcgg gcataagtca gcagctcttc
    24781 aattaaagct tcaagttgac tgatatcacg attcaacgcc tgggattcgg tggcgctcag
    24841 gttatcgctc atctccagtc gataacgcag gcgcactaac ggtgttcgca gttcgtgagc
    24901 gataccgtca ataagctgtt ttttgctggc aatcaaggcg ttgatattgt ccgccatctg
    24961 gttaaatgcg ataccaagtc gttcaaagct cgaaccctca tcaaagtgga tacgttcatt
    25021 gagatgccca tcgccaaatc gttgcgccgc tgcttccagt tttaacatat cctgccagtg
    25081 cggacgcatc cagataaaca tcggaaaggc gagggaaata gcaataaaag cgatcagggc
    25141 gatatccagc aatcgcatct gatggagata ataaagataa ggaacaggac caactgccag
    25201 cacgtagtgg ctgcgcggga tacgctgcaa aaacgtgtac tgatcgtcta gggcgacaat
    25261 ttcgccgcca cgcagtcggt gcatggaaat atcatcaaga tggtatttac tcagtggctc
    25321 gacacgcaga tcgaaagaga gatttaaatc catctctttc agcgttttac cccagtcgtg
    25381 tggggggatc tcacgcaatt cgctgcgcat cagatacagc gaactgttca tcaaatcatc
    25441 cagcgactgt ttgcccgcgc gttcggcggt aaatttgtac accagcccaa ccagcagaga
    25501 catcacaagg aagcagacaa acaataacag gtaaaactgg ataaacaatt ttttcatcgc
    25561 ttattcccat gcatgaggcg caaaaagata gcctttgtta cgcacggttt taatgcgata
    25621 aggttctgcg gcgttatcga gcagtttttt tcttaaccgc gaaatagcca cgtccacgct
    25681 acgatccagt ccgtcataac tgacgccgcg taaatttttc agcaatgcat cgcggtccat
    25741 gatttgcccg gcatgggtag ctaattccca caataattcg aaatcagctg tcgagagcga
    25801 gatttcagtg ttagccaggg tgactacgcg gttgatgggg tcgatagtta acgtgccgaa
    25861 atgcagggct ttgtagggag tcagagacgt ttcctgaaga cctttggtca gtgtggcttg
    25921 ctcattctga cgcaaatgca aacgtaaacg cgctagcaaa acagcagggg gcgtcgtttt
    25981 gagaatatag tcgcaggcac ccatttccag tgccaggata tggttcatat cgctatcgag
    26041 agaggttaga agaacaatcg gtccagacca ctttgcgcgt aaatcacgac aaatggtcat
    26101 gccgtccttg cctggtagca tgatgtcgag taacaccaaa tctggatttt ctcgcaaaat
    26161 ggtttcttcg gcctggtcgc cgcgcggctc tacggtaacc tgcatatcat gttttgccag
    26221 gtacgcggca atcagtgaac cgacttccgc atcatcttcc acaaatacga tagtgttcat
    26281 aacattcacg gtagatataa aaacgtcaca atacaccgcg ctgtttttac ttactatcaa
    26341 tcgtttctaa acaagttttc atcaggtatt ctactgatga tttgttatgg aagtgttaag
    26401 gtaaaaaatg gggctggtaa tcaaagccgc gctcggtgcg ctggtagtgc tgttgattgg
    26461 tgttttagca aaaacgaaaa attattatat cgccgggctg attccacttt tcccgacctt
    26521 tgcgcttatc gcgcattata ttgttgccag cgaacgcggc attgaagcct tacgcgcaac
    26581 catcattttt agtatgtggt cgattattcc ctattttgtt tacctagtgt cgctgtggta
    26641 tttcaccgga atgatgcgct tgcccgccgc ttttgttggt tctgttgcgt gttgggggat
    26701 aagcgcatgg gtgttgatta tatgctggat aaagctgcat taacgcagat gacgaccgcc
    26761 atcaagtggg aaactgcgtc cggtgacaaa gcaactggta aataagtaat cgaccaggtc
    26821 gatcacttct ttctcgccag gcgcggtttt catcagtgat ttattcagcg cctgttgtcg
    26881 atattcggca tcatcatgtt cattaaacag gatcagcgat ggcgcaatag aattcacttt
    26941 cacttccggt gccagcttgc gggcaaacga gcgggtcata ttatccagtg ccgctttgct
    27001 tgcagcatac gcaacatgtt tgtcgctacc gcgctccacc acataatcgg taaagtgaat
    27061 gatatcgctg gcggcgtgtc cgtgcccacg cagtaatctt tccagcgcat ggttgagcag
    27121 gtatggggta ttaacgtgga tctgcatcat gcaagccagt acgtcggcca gtggcgcacc
    27181 cggtttttcc gcaatccacg cactggcgtt atgcaaaata gcacgcagac catgggtgct
    27241 ttttagtact tcatcggcaa acgccatcac accgtcgttg gtcgaaaaat cagcctgaat
    27301 acactgcgca cctgcattaa tcagtccatc aatggctgga tagtgtgtcc gatagctgac
    27361 aatcaccggt tgcttttgat taatgaaatg ccatgcgagg gcgaggccga tgcgacgacc
    27421 tccgccagta attaatattg gcaagggctg ggttttaccc atcgttatct cctttgctat
    27481 ccaacgatgg gatgaacgtt atcccaccag catccaggtc gccggaactg aggcaattaa
    27541 cagcatgcca atcagcacca tttcctgacg gttcagtaca ttatcatgtg tatgcgtttt
    27601 gcgcgcatac aggaaaacca gcagccccgg tgcatacaga acaacggata acagcaagtg
    27661 cattggacca gaggcgtaca ataaccataa gccataaatg caggcaccga cacctaccgc
    27721 tttatgcagt ggacgggttg cgattttcag caagaacgcg ccgaccagga aatagggcac
    27781 cagaatcatt tctgaggcga tggtcagcaa cgtgttgtaa tcggaaccgg tcagccagat
    27841 gagtaccaga caaatttgca cgcagatgtt ggtcaaccac agtgaggcgg atggcgcagc
    27901 ttgtgcgttc tggcgcgcaa aaatgcgtgg gaatgcttta tgagtggcag ccaggaacgg
    27961 aacttctgcc gccatgatgg tccagcttaa gtacgcgccg caaacggaaa cgatcaaacc
    28021 ggcagcgatg atgatttcgc cccatggtcc catcatttcc accatcagac cggccattga
    28081 cgggttacga atttcagcca gttcaggacg tgccaccaca cccagcgaaa gcagcgttac
    28141 cagcaagtaa acgcccagag cggagagaac cgccagcagt gtcgctttgc caacatcacg
    28201 tttattacgc gcacgcgcag aaacaaccac ggcaccttcc acaccaatga aaacccacag
    28261 ggtgatcagc atggtgtttt tcacctgttc ccaaacaggt acgccaagtg caagtccggt
    28321 gaagtcgagc ttgaaggtat ccagtttgaa catcatcatc gccagcacta caaacagacc
    28381 cagcggcaac aattttgcca gtgtcgccac caggttaatg ctggcagcgg tttgcacccc
    28441 gcgcaggatc aaaaagtgaa caatccacaa taaagccgat gcaccgacta gcgattgcca
    28501 ggtattacca tcgccaaaca ggcgcaattc cggcgtgtcc gtaaaaaagc ttaacgcgga
    28561 aaaaacgatc accagatagg agacgttggc gatgaccgcg cacagccagt atccccatgc
    28621 ggaacaaaag ccgattagct cgccaaaccc ttcgcgggca taggtaaaga taccgccatc
    28681 aagttcggga cgaatgcgcg tgaggatcag catggcaaag gccagcaata aaatgccggc
    28741 gccagtaata ccccagccga tgagcagtgc tgccgggctg gcaactgccg ccatattttg
    28801 cggcagactg aaaacacccg cgcccagcat tgagcttaat accagcgcgg tgagtgcgct
    28861 cagtcccagt ttcttttcca tcgatatcca gtgattaaaa cgtgataaga agaataaata
    28921 ttagggcaaa acgcataaaa atggagtttg ccactgaagc gcgggatttt acgaagagat
    28981 gtgtctgcat gcaatggtcg cggggaaatt tgtgactaaa aatgcgaaag gcggcatcaa
    29041 gccgccttat aggagtaact gaatagttat ttatacagat ctgcgctgac ggtcaggtta
    29101 ttaccacgtt cctgccactg gcgggtgatg tggtaatact tagcaccttt cttcgcggca
    29161 cgtttcgcaa cctgatagga gacttcggtc atgttgccgt agttgccaga gaatttgatg
    29221 ctgtcgaacg ggaccatcat cgctgctgtc gctttgttca gttcttcgac tttagtgcca
    29281 tctgggagcg tgacggtgta acgcccgcct tttgatgact gggtttcaaa gaagcgaccg
    29341 acttcagaac ttggtgatgc ggtagtcgca acacccggga tctcaacttt cttcgcggct
    29401 tcgccaccgg cagccagagc tgcacgtcct gcttcggaat ctgccgggat cacatccggg
    29461 ctctggacga tacgtttctt agcatctttt ttatagatga atgcagtaat acgctggttg
    29521 ccgccctggt tggcatcgat ttgacgaacg atgtagaaag agtaggcacc tttcgctttt
    29581 gccgcgttgg tgatggcatc attgacttct ggctggctac gatagaagcc ctggacggtg
    29641 accgtgtcaa acggttcaat cagaacagcc tgatctttcg gcagttcgac aacaccgtta
    29701 attacgcgat tatttgtttc ttctgctttt tcagcatcgg ctttatagag gtcagcgacc
    29761 acacgccagt taccgctgtt accaaaatca gaagtgtcga caacataaaa agaggcggca
    29821 ccttctttat ctgcgcgacg agaaacggct ttcaccgctt cgccaatagc attaaaacga
    29881 ccggtaacca ctacacggtc aaaaggttta accgctgccg cttgctccgg tgtcagttct
    29941 gttgctgcgt taacggagaa tgccgtagca gaaagcagtg ccgacgccag gagggtgttc
    30001 ttaagcttca taaaaataat ccttcgcctt gcgcaaacca ggtactggta ttgttattaa
    30061 cgagaaacgt ggctgattat tgcatttaaa cggtgtaact gtctgcgtca tttttcatat
    30121 cacattcctt aagccaattt taatcctgct caaatgaccg tctatgctta aaaaacagcc
    30181 gtatcagcat cattactact gaagcaactg aattgtataa gttaatttaa tgttaagtag
    30241 tgattcgtgc cggggcgatg tctcgtttta cccgaccgtc gaagacaatt atcagtcttt
    30301 atccggcgtt ctaaggtgtt tatcccacta tcacggctga atcgttaata ttttgcgagt
    30361 tcacgccgaa atactgattt ttggcgctag atcacaggca taattttcag tacgttatag
    30421 ggcgtttgtt actaatttat tttaacggag taacatttag ctcgtacatg agcggcttgt
    30481 gtggctcctg acacaggcaa accatcatca ataaaaccga tggaagggaa tatcatgcga
    30541 attggcatac caagagaacg gttaaccaat gaaacccgtg ttgcagcaac gccaaaaaca
    30601 gtggaacaac tgctgaaact gggttttacc gtcgcggtag agagcggcgc gggtcaactg
    30661 gcaagttttg acgataaagc gtttgtgcaa gcgggcgctg aaattgtaga agggaatagc
    30721 gtctggcagt cagagatcat tctgaaggtc aatgcgccgt tagatgatga aattgcgtta
    30781 ctgaatcccg ggacaacgct ggtgagtttt atctggcctg cgcagaatcc ggaattaatg
    30841 caaaaacttg cggaacgtaa cgtgaccgtg atggcgatgg actctgtgcc gcgtatctca
    30901 cgcgcacaat cgctggacgc actaagctcg atggcgaata tcgccggtta tcgcgccatt
    30961 gttgaagcgg cacatgaatt tgggcgcttc tttaccgggc aaattactgc ggccgggaaa
    31021 gtgccaccgg caaaagtgat ggtgattggt gcgggtgttg caggtctggc cgccattggc
    31081 gcagcaaaca gtctcggcgc gattgtgcgt gcattcgaca cccgcccgga agtgaaagaa
    31141 caagttcaaa gcatgggcgc ggaattcctc gagctggatt ttaaagagga agcgggcagc
    31201 ggcgatggct atgccaaagt gatgtcggac gcgttcatca aagcggaaat ggaactcttt
    31261 gccgcccagg caaaagaggt cgatatcatt gtcaccaccg cgcttattcc aggcaaacca
    31321 gcgccgaagc taattacccg tgaaatggtt gactccatga aggcgggcag tgtgattgtc
    31381 gacctggcag cccaaaacgg tggcaactgt gaatacaccg tgccgggtga aatcttcagt
    31441 acggaaaatg gtgtcaaagt gattggttat accgatcttc cgggccgtct gccgacgcaa
    31501 tcctcacagc tttacggtac taacctcgtt aatctgctga aactgttgtg caaagagaaa
    31561 gacggcaata tcactgttga ttttgatgat gtggtgattc gcggcgtgac cgtgatccgt
    31621 gcgggcgaaa ttacctggcc ggcaccgccg attcaggtat cagctcagcc gcaggcggca
    31681 caaaaagcgg caccggaagt gaaaactgag gaaaaatgtg cctgctcacc gtggcgtaaa
    31741 tacgcgttga tggcgctggc aatcatcctg ttcggttggc tgtcaagcgt tgcgccgaaa
    31801 gagtttcttg ggcacttcac cgttttcgcg ctggcctgcg ttgtcggtta ttacgtggtg
    31861 tggaatgtat cgcacgcgct gcatacaccg ttgatgtcgg ttaccaacgc gatttcaggg
    31921 attattgttg tcggagcact gttgcagatt ggccagggcg gctgggttag cttccttagt
    31981 tttatcgcgg tgcttatagc cagcattaat attttcggtg gcttcaccgt gactcagcgc
    32041 atgctgaaaa tgttccgcaa aaattaaggg gtaacatatg tctggaggat tagttacagc
    32101 tgcatacatt gttgccgcga tcctgtttat cttcagtctg gccggtcttt cgaaacatga
    32161 aacgtctcgc cagggtaaca acttcggtat cgccgggatg gcgattgcgt taatcgcaac
    32221 catttttgga ccggatacgg gtaatgttgg ctggatcttg ctggctatgg tcattggtgg
    32281 ggcaattggt atccggctgg cgaagaaagt tgaaatgacc gaaatgccag aactggtggc
    32341 gatcctgcat agcttcgtgg gtctggcggc agtgctggtt ggctttaaca gctatctgca
    32401 tcatgacgcg ggaatggcac cgattctggt caatattcac ctgacggaag tgttcctcgg
    32461 tatcttcatc ggggcggtaa cgttcacggg ttcggtggtg gcgttcggca aactgtgtgg
    32521 caagatttcg tctaaaccgt tgatgctgcc aaaccgtcac aaaatgaatc tggcggctct
    32581 ggtcgtttcc ttcctgctgc tgattgtatt tgttcgcacg gatagcgtcg gcctgcaagt
    32641 gctggcattg ctgataatga ccgccattgc gctggtattc ggctggcatt tagtcgcctc
    32701 catcggtggt gcagatatgc cagtggtggt gtcgatgctg aactcgtact ccggctgggc
    32761 ggctgcggct gcgggcttta tgctcagcaa cgacctgctg attgtgaccg gtgcgctggt
    32821 cggttcttcg ggggctatcc tttcttacat tatgtgtaag gcgatgaacc gttcttttat
    32881 cagcgttatt gcgggtggtt tcggcaccga cggctcttct actggcgatg atcaggaagt
    32941 gggcgagcac cgcgaaatca ccgcagaaga gacagcggaa ctgctgaaaa actcccattc
    33001 agtgatcatt actccggggt acggcatggc agtcgcgcag gcgcaatatc ctgtcgctga
    33061 aattaccgag aaactgcgcg ctcgtggtat caacgtgcgt ttcggtatcc acccggttgc
    33121 ggggcgtttg cctggacata tgaacgtatt gctggctgaa gcaaaagtac cgtatgacat
    33181 cgtgctggaa atggacgaga tcaacgatga ctttgctgat accgataccg tactggtgat
    33241 tggtgctaac gatacggtta acccggcggc gcaggatgat ccgaagagtc cgattgctgg
    33301 tatgcctgtg ctggaagtgt ggaaagcgca gaacgtgatt gtctttaaac gttcgatgaa
    33361 cactggctat gctggtgtgc aaaacccgct gttcttcaag gaaaacaccc acatgctgtt
    33421 tggtgacgcc aaagccagcg tggatgcaat cctgaaagct ctgtaaccct gacggcctct
    33481 gcggaggccg tcactcttta ttgagatcgc ttaacagaac ggcgatgctt tgacctcccg
    33541 ctgtttgttc aagcgcaatt ttgacaataa ttgtcaacgg cacggaaagc agcataccca
    33601 ccggtcctaa caaccatccc caaaaaatca acgacaaaaa taccaccaat gtcgaaagcc
    33661 ccagcccacg tcccatgatg cgcggctcca gaatattgcc gaagaccaga ttaatcagca
    33721 gatatcccgc cagcaccagc aacgcttcgt agaagccatt aaacaccagt acctgagcga
    33781 taggggggat tgccgcgaga actgaaccaa tattagggat gtaattaagc gcaaaggcca
    33841 gcaatcccga gacaaaagcg aagcgaacat cgagtgcggc gagcatcgcc caggccacca
    33901 ggccggtgat gatgctgatg gctgttttca gcaccagata atgagacaca ctgtctatcg
    33961 cacgctgaat cgccgccatc ccttcaaccg gacgcgccat catttgctga aattttccgg
    34021 gcaattgtgg cacttcgagc agcataaaca gcaccgtcag cagcaataaa aatattgatg
    34081 acatggcatt agataactgc gtcaataagt tggtgagcaa cgtcatcgcc gcgttcggat
    34141 caatgtaatg cgccagttgg tcaactgaga cgtcaatccc tacgcgttgc aacaacggct
    34201 caagagcttg cagcggcgtc ataatagagt tgcgatattg cggtaacgtc cgcgtcaact
    34261 cgttgagcgc ggaacccaga taagctaaca gcaacaccat cgccatcacg atgatggtca
    34321 tcaaaatcga cactgccagt acacgcggca ctcgccagcg gaccatatgt tgcaccagcg
    34381 ggttaagaat aacagcaata aataatgcga gaataaacgg cacgatgatc tcggcggcaa
    34441 aacggatacc gcagagaata atgaccagca ttcccaacat aatgacgatt tttaggccat
    34501 tgagcgtgat gatcggcttt gccatgcttg tccccgtttt ttcttccttt gctaataata
    34561 atgtcttttt cgctccgtca tcataacgaa aatcaaaccg atcaggtaaa gaagtgaaaa
    34621 tattttgagt taattcttaa gctatgatac aaatcaggcg tgttcaacta ccgaggacaa
    34681 ttatcatccg cgatgacgag aagcaacact gcggataatt gtaatattat ggacaatttg
    34741 ttcagggcgt tattttctac atttacccat cttcgtacct catccactat cttgctcgta
    34801 ggtgagcagc actggcgcaa cgcgctttag tcctttcttc tgcctaagct tgccctatgc
    34861 gcggggcttg accactttac tttggtttcg ctgaattaag cgaaaattaa aataattctc
    34921 ttgcaggaga aggacaatgt atatttattg gattttatta ggtctggcta ttgctacaga
    34981 aattaccggt acgctgtcta tgaaatgggc gagcgtcagt gagggaaatg gcggctttat
    35041 tttaatgctg gtgatgattt ctctgtcgta tatatttctc tctttcgccg ttaaaaagat
    35101 cgccttaggc gtggcttatg cgctgtggga aggtatcggt attttattta ttaccttgtt
    35161 tagcgttttg ttattcggcg aaagtttatc gctgatgaaa attgccgggt taaccaccct
    35221 ggtcgccggg attgtgttga tcaaatcagg tacccgtaaa gcgcgtaaac ctgaactgga
    35281 ggtgaaccat ggcgcagttt gaatgggttc acgccgcctg gctggcattg gcaattgtgc
    35341 tggaaatcgt tgctaacgtc tttttgaaat tttctgacgg ctttcgtcgc aaaatatttg
    35401 gcttgctctc cctggcggcg gtgctggctg cctttagtgc gctttctcag gccgttaaag
    35461 ggatcgactt gtctgtcgct tatgcattgt ggggcgggtt tggtattgcc gccacgttag
    35521 ccgcaggttg gatcttgttt ggtcaacggt taaatcgtaa aggctggatt ggcctggtct
    35581 tgctgttggc tggaatgatc atggtgaaac ttgcctgatg aacacgctgc ccgcacagtc
    35641 gggcagcatt tgaacattat ttttgcgaca gttgatccag cttgtcgcga aaaccggtaa
    35701 cagaaatggc ccggttatcg gcgcgccagc gatctttcgc ggcaggagcc gaactttgca
    35761 ccccaattaa ttgccagccg tcattggtat gcaacatcag aggcgaaccg ctgtcacccg
    35821 gcaaggtatc gcactgatgt gacatcaccg acgtttgcgc ccagccagtc acttcacagt
    35881 tttgatgact gtataacgta tcgagatgat cttcagggta tcccgcctga gtcactttac
    35941 gaccagccga ttttaatgcg gcagtaagcg cggctttatc tccctcaaat aacggcaacg
    36001 gtgtaatgcc agaaggggga ttacgtagca caatcaatcc gaagtcccac ggtgcagctg
    36061 cgggaggaac aatccaacca tccccatctg cttttaaccg ctttcccagt gtcggatcaa
    36121 cgcggccttc tatgtcgtgg atctcatagc gccaaagacc tttatttgac acaaaacgca
    36181 gcgctacggc cttatccgct ttacccttag gcggcgtcaa taaacagtgt cctgccgtta
    36241 atgccagatt gggtgcaatc agcgtcgccg tacataaatt gccgctggcc gtttccagtt
    36301 gcccaaccgc atcccacggt gattgggtcg tgtcattcac tggcacacga tcatcatgac
    36361 caaaaaacag ggtgctgacc tcatcgtttg ccgatttggc aacgtctggt ttatctgcaa
    36421 acacaaaagc agacgtcaaa ctaattgcac ccaacactac agcaatggtt gtacgcatat
    36481 cacactctgg tgggtaatta tgattattaa aagcaaaccc tcataaatac tatagacggg
    36541 acgggatgaa agtgggagta aaatcagata actacagtca ggaaagataa aaacgggcgg
    36601 caatcagtgc gcataaaata agaatgataa gaatgaactc aaagcgataa cggcccacca
    36661 tactaccctc cgctaaaggc ggtgctaaac gttacccgct tagcaccgta attttcaggc
    36721 gcgagggggc gcgccagcat tactgttgaa aacttacgct gcgggttgtg cagcaggttt
    36781 tgccggttgc tgatggctgt gtttcttggc gtgtttcttc gctgcctgcg ctttttgttc
    36841 tggggctttc tgttcagctt tcgcattttt atgatgcttt ttagccgcct gcgctttctg
    36901 ggcaggtgct gctttatgct gttttttatg atgtgtagtt ttcgccggcg ctgctttggt
    36961 ggtcgtcgca gtcggagcag gtgtggtcgc agtctctgca gcaaaggcgg cagaagacag
    37021 acccatagca gcggcaacaa ccagagctaa tacttttttc attgtcatac cctcaatttg
    37081 ttttttcatt taaccccact gcggggccgt tgaaataact atatccctgg gaatggcaga
    37141 cttccgtgag tggttggttt cagcgtgtaa cgatatgtac aaacgctgaa taaattacag
    37201 cgttgataat aacgtattgt gacttaagga aaatttagct accaataata gtagtcttga
    37261 tcgggttaac tattttacta cttacaaagc ggtagaataa ctgcgcatca gtaataaatg
    37321 acacacagca aaatgaatcc gtttatttgg gtacttataa tcctgatgac gctagacgcg
    37381 ctgcgggaat tggctggcgc ttcgtctatt ttaggatggc tattaacgtt ggtttgagca
    37441 agcaataagt ccggacgggt agttaccgca gtccgggctt atttttcagg cgtgcagacg
    37501 acgatgcaaa cgcgtcccga ccagcagagc aatgaccagc atcagagcaa taaatgcgcc
    37561 gacgccgttc cagccatagt tatgccagaa aacaccaccc agcgtcccgg caatactcga
    37621 ccccagatag taactgaaca gatacagcga ggaggcctgg cctttagcgc gttttgcgcg
    37681 ggggccaatc cagctgctgg caactgagtg ggctgcgaag aatcctgctg agaagagtaa
    37741 cattccggca aagatcagcc acagcgagct gaataaggtc atcagtaaac caaacagcat
    37801 aacccccgtc gaaaacaaca tcaccggacc gcgcccgtag cgggtggtca tggttccggc
    37861 tttgggtgag ctccatgtac cggtcaaata agccagcgat aataagccaa ccacggcctg
    37921 actgacatgc cagggggaaa gcatcaaccg atagccgatg taattaaaca gcgtgacgaa
    37981 cgaccccatc agcaaaaagc cttctgcgaa caataacggt aatccccggt cacgccagtg
    38041 cagacgaaag ttgataaaca acgtcttagg tcgcagcgaa gtcgggcgaa aatggcgtga
    38101 ttccgggagg attttccaga acatcaacgc tgaggctagc gcgaaacaac cgattgccgc
    38161 cagagcaatt cgccagttga aaaagtccgt gaagacacca ctaattaagc gtccgctcat
    38221 gccgccaatt gagttgccgc tgatatacaa ccccatcgaa aaggccacga aactggggtg
    38281 gatttcctcg ctaagataag tcatgccaac agctgccacg ccacttaacg aaagcccaat
    38341 caaggcgcgc ataatcaaaa tgccgtgcca gctggtcatc attgtcgaaa gtaacgtaca
    38401 aatggaggcc aacagtagcg ccgtgaccat cactgatttg cgaccaatgg catcggatag
    38461 cgggccagta aatagcaaac cgatagccaa catcgccgtg gaaatggaca gtgaaatact
    38521 actgttcgcg ggcgttaagc caaactcctg cgaaagcacc ggaaggatag gctgcacaca
    38581 atagagaagt gcaaaggttg ccagtccggc agagaacagc gccagggtga cgcgcataaa
    38641 ttgcggcgta ccgcgtttaa taaattgatt tggctgagaa atgctttgct tgtcagtgtc
    38701 gcttgccgga gcgccatcaa cagttgtagt acggctcact tgaaatcctt gctaaatatg
    38761 cctgtggatc aggcttatac atagggtagg aaaatcgaat tgttctgtat aatatattaa
    38821 taatctcaaa taagatgttt taaatatgaa tattgaactt cgtcatctgc gttactttgt
    38881 tgctgttgcg gaagagctgc atttcgggcg cgccgctgcc cgcctgaata tttcgcaacc
    38941 accgctaagt cagcagattc aggcgctgga gcaacaaatt ggtgcccgac tgctggcacg
    39001 aaccaatcgc agtgtattgc tgacggcagc aggaaaacag tttcttgcag atagtcggca
    39061 aatcctgtct atggtggatg acgctgccgc tcgcgctgaa aggctgcatc agggggaagc
    39121 gggggagttg cgcattggtt ttacttcgtc cgctcctttt attcgggcgg tgtctgatac
    39181 gttatcgctg tttcgccgtg attatcctga tgtccattta caaacccgcg aaatgaatac
    39241 tcgcgagcaa atcgctccgc tcattgaagg aacgctggat atgggattgc tgcgtaacac
    39301 agcgttaccg gagacgcttg aacacgcagt catcgtccat gaaccgctta tggcgatgat
    39361 cccgcacgat catcccctgg caaataatcc gagtgtaaca ctggctgaac tggcgaaaga
    39421 accctttgtc ttttttgatc cgcacgtcgg gacagggctg tatgacgata ttctcggact
    39481 gatgcgacgt taccatttga cgcccgtcat cactcaggag gtgggcgagg caatgaccat
    39541 catcggtctg gtttccgccg gtctgggtgt ttcaattttg cctgcttcat ttaaacgtgt
    39601 tcagctcaac gaaatgcgct gggtgccgat tgctgaagag gatgcggttt ctgaaatgtg
    39661 gttggtctgg ccgaaacatc atgaacaaag tccggcttcg cgctttcgta ttcatctgct
    39721 gaatgctctc aggtgaggga aatttcagcg aaaaagcccg aaaaatgtgc tgttaatcac
    39781 atgcctaagt aaaaatttga cgacacgtat tgaagtgctt cactatagcc tacaaattat
    39841 ttcggagcgt gaaaatatag ggagtatgcg gtggttgctg aaaaccagcc tgggcacatt
    39901 gatcaaataa agcagaccaa cgcgggcgcg gtttatcgcc tgattgatca gcttggtcca
    39961 gtctcgcgta tcgatctttc ccgtctggcg cagctggctc ctgccagtat cactaaaatt
    40021 gtccgtgaga tgctcgaagc acacctggtg caagagctgg aaatcaaaga agcggggaac
    40081 cgtggccgtc cggcggtggg gctggtggtt gaaactgaag cctggcacta tctttctctg
    40141 cgcattagtc gcggggagat tttccttgct ctgcgcgatc tgagcagcaa actggtggtg
    40201 gaagagtcgc aggaactggc gttaaaagat gactcgccat tgctggatcg tatcatttcc
    40261 catatcgatc agttttttat ccgccaccag aaaaaacttg agcgtctaac ttcgattgcc
    40321 ataaccctgc cgggaattat tgatacggaa aatggcattg tacatcgcat gccgttctac
    40381 gaggatgtaa aagagatgcc gctcggcgag gctctggagc agcataccgg cgttccggtt
    40441 tatattcagc atgatatcag cgcatggacg atggcagagg ccttgtttgg tgcctcacgc
    40501 ggggcgcgcg atgtgattca ggtggttatc gatcacaacg tgggggcggg cgtcattacc
    40561 gatggtcatc tgctacacgc aggcagcagt agcctcgtgg aaataggcca cacacaggtc
    40621 gacccgtatg ggaaacgttg ttattgcggg aatcacggct gcctcgaaac catcgccagt
    40681 gtggacagta ttcttgagct ggcacagctg cgtctcaatc aatccatgag ctcgatgtta
    40741 catgggcaac cgttaaccgt ggactcattg tgtcaggcgg cattgcgcgg cgatctgctg
    40801 gcaaaagaca tcattaccgg ggtgggcgcg catgtagggc gcattcttgc catcatggtg
    40861 aatttattta acccacaaaa aatactgatt ggctcaccgt taagtaaagc ggcagatatc
    40921 ctcttcccgg tcatctcaga cagcatccgt cagcaggccc ttcctgcgta tagtcagcac
    40981 attagcgttg agagtactca gttttctaac caaggcacga tggcaggcgc tgcactggta
    41041 aaagacgcga tgtataacgg ttctttgttg attcgtctgt tgcagggtta atatttttta
    41101 actgttctac caaaatttgc gctatctcaa tttgggctag gaaagcataa cttagacttt
    41161 caaggttaat tattttcctg gtttatattt gtgaagcata acggtggagt tagtgatgct
    41221 gaagcgtttc tttattaccg gtacagacac ttctgtaggg aaaacggtgg tttcccgcgc
    41281 attgctacaa gcgttagcct cccagggaaa aacggttgcg ggatataaac ccgtagcgaa
    41341 ggggagcaaa gagacacccg aagggctgcg taataaagat gccctggtgt tgcagagtgt
    41401 ttcaaccatc gaactgcctt atgaagcagt taatcctatc gcgttaagcg aagaagaaag
    41461 tagcgtggcg cacagttgcc caatcaatta cacactcatt tcaaacggcc tggcaaacct
    41521 gaccgaaaaa gtcgatcatg tcgtggtaga agggactggc ggctggcgca gtctgatgaa
    41581 tgatttgcgt ccactctctg aatgggtagt gcaggaacaa ctgccggtgt tgatggttgt
    41641 cggtattcag gaaggttgca ttaaccatgc actgctaaca gctcaggcga ttgccaacga
    41701 cgggctgccg ctcattggct gggtggctaa ccgaatcaac ccaggactgg cgcattatgc
    41761 ggaaatcatt gatgtgctcg gtaaaaaact tccggcaccg ctcattggtg aactgcctta
    41821 tctgccgcgc gccgaacagc gtgaactggg gcaatacatc cgcttagcta tgctgcgcag
    41881 tgtgctggcg gtagatagag tcacggtgta acgtccgcga gattaccgac gcaattacgc
    41941 aggcaatcaa taaaccgggg agtagctgat actccccggt catttcacat atcatcaacg
    42001 tcgacataat cggcgcgtgc gtggttgccg ccaacagtgt cgccatcccg gtcaatccga
    42061 gtaaaagcgt aatttcttcg ccatcaggga accataatcc caggctacga ccatacaaca
    42121 tgccaatggc aagaccgata aatagcgtcg gtgtaaagac accaccgggt gcgccggaac
    42181 ctctactcgc cagcacggca cacagtttac aaaggaagat cccggcaatg atcattaaca
    42241 gtggtggggc ggttaaaaag gattgtacgg tgctatagcc gttgccccac actgcaggtg
    42301 tgaacaggga aagcagaccc acgatcaacc cgcctagtgc cagttgccag ggcggcgcaa
    42361 gtttgagact cacaaatcca cgatgacagg cgttcattaa cgttaacaac agtggtccgc
    42421 acagacctgc cagcacacct gtactgataa tcagcgcata gtcacgagcc tgaaccgtca
    42481 ctgagagttg tacgctgtag agtaacgcgt cgctatgatt aatcagattg ctaaccagca
    42541 atgccacgac ggcggaaata atcaccgggc cgagagaggc caacatcata gtgccaaaca
    42601 gcacttcggc tataaataaa ctgccagcaa gcggggcacg ataggccgca gccattcccg
    42661 ccgcggcccc acaggcgatc cataatttcc actcctggcg tggcgtaaaa cgttgggcaa
    42721 aacaggaggc ggcaagggca gctaaaagaa tcatcgcacc ttcgcgacca attgcactgc
    42781 cgctggttac taccagcagc gaggcaagcg atttaaccag gcttgctgcg taatcgaact
    42841 gtccatcggt ttgcaacgct tccatgtaat cggtcggcgc atgagggcgt tgttgggtaa
    42901 atttctgcca gcccatcagc aacaaacccg ccgccagtcc gccgagcgcc ggagttagca
    42961 gccgtcgcca gggggaaagg tttgtcgctg cattgaccag actgccggag tcattattga
    43021 ggaacaacca ctccagtagc agcatcgcat gacgaaaccc ggcaacggca aaggccgcga
    43081 gaataccgac gactgttgcg ataagcagac ggcggaacat agtgcgcaga tccggataga
    43141 tgtgtagatg atgcatgagc agaaatgggc aatgaaacac gggcgactat tttgcggcaa
    43201 aagaggccaa ccgcaaaagc agtgcgtgct ttaagagata aaaaacgtga cgttgtaacg
    43261 tattattgcc gaatcgcgcg taatcgtcac catccggcaa tattacggtg atcctatcga
    43321 aagagtggtt taaccgcgac aggaatcaac agttgtgatt gccattgcgc cagcgttaag
    43381 cgagccagtt cacccagtgc acggtagaaa gggtgttctg ctttttcgat aaaaacatca
    43441 agaaaacgtg ttgaccacgg aaaaaggtgc catgccagca attcttcgca ttctgtctgg
    43501 cgaccattct ccgccaacca cgcagccatc aacagcagtg aaccaaaatg atcttccggt
    43561 tcgttttgct tcatttcaaa ctgaatgcct ttctcgcgca tccactgacg aagtgccaat
    43621 gttgaatcgc caaacagcac agattcgcga tccagccaga ccgaccccca cggcggagac
    43681 ggcagtgccc acgggccgac aaacaaacgc tgccaggcct gggcgtgagt ctcttcacac
    43741 tgtgtctgaa aagccgtcac cagcggcgct aatgacgctt ctggtagagg ccactgagtt
    43801 tcccagccgt cactggtgag taccgcaacc agaggtgcgg cttccgcact ctctggagcg
    43861 taataaaaca gcgcgcccaa cacgcgcgcc gcgacagaaa aattatcttg ctgtgaaaaa
    43921 tgggtcattc ctaacatcct gaaatgtgcg ggttgccccg caccaatttg ttaacctgca
    43981 atagccattc ctactgtcat gtgcaggcca taaaagagca cacgcccgat catctcacca
    44041 acaagtatga ggattagccc cagaacaagt ccggcaacgt gaggttcacg gcgacgaatg
    44101 agcggacaaa gccagcatcc aagacctgcg cataacaata ccacacgcca gacctgtaag
    44161 gaggcgtaat ctggtaccag tgcgctggct tgttgcacgg atgagtgaat agacgccaga
    44221 gacaaacctt gcagcacaat caccccggca caagcgatca gcgccagaac gctaatgatg
    44281 gcaaatggtg tggtattaaa tgtaacgcgg gctgcccgca gaattgcggc agcaagtatt
    44341 ggaccgctca acaataccgt caggaagaaa gccagcgtag tgtaaccgtt atgccaggtt
    44401 ggcacggtgt cgatttgata cacgcaggtc atcatccaga cgaaaatgac gccgagcgcc
    44461 atgctgacaa gtaaccagag tttccccaac gcttgcggca ttttaccgat gaccgccacc
    44521 agccaccata gtccgccaac ggcaaaaaat atggaaccgg cagcaatctc gttactcaga
    44581 ccagaagctc cgattcgatt cagcgagtta aacgctcgca gtggcgatcc caggtgcatg
    44641 acagaggcaa taaacccgat gcccatcaac agccagagga aaaacatgcc acgaacaatg
    44701 tgctgacggt ctgcgtcatt tttggcggcg aacccgccaa ttccgctaac aatcagcgcg
    44761 cctactacgc attgacccaa tacggtaaag ataaccagtg gccattcatg ccatccattt
    44821 cccattttac acttcctccg gattagccag ataaccagtg gtatcgccgg tcgggcggct
    44881 gttggcgtta ggtttgataa cgatattggg ttttgtgaaa tgcgcgcggc agtggcgcga
    44941 cggcagccag agtgccgtgc ttctggcgca gctcttcaat tggaccgaac tcaagtgcac
    45001 gcagcgggca ggattcgacg catatgggtt gtttcccctc ggcgacgcgc gaataacaac
    45061 catcgcactt cgtcatgtgc cctttttcag cattgtactg tggtgcgccg tacggacaag
    45121 ccatgtggca gtagcggcag ccgatacaaa catcttcatc aaccaccaca aagccatctt
    45181 cacgcttatg cattgcgccg ctggggcaga cttttgtaca tgcggggtca tcgcaatggt
    45241 tacaggagat ggagagataa taagcgaaca cgttctggtg ccagacgcca ttatcttcct
    45301 gccagtcgcc gccagcatat tcataaatac ggcggaaact gacttccggg ccaagatctt
    45361 taaaatcttt gcacgccagt tcgcaggttt tacagccagt acagcggctg gaatcgataa
    45421 aaaatccata ttgtgtggtc atgggctact ccttaaacct tttcgatctg gacaagattg
    45481 ctgtgcgacg ggtttccctt tgccagcggt gaagggcggt gagaggtcag aatattgata
    45541 ctgccgccgt gatcgacccg gtcaccaaac atatccgttt taagccacgc accttgcccg
    45601 atggcggtaa cgccaggcag aatacgcgga gtcacttttg cggcaatcag catttctcca
    45661 ttattgttaa atacccgcac ggtatcgcca tgacggatac cgcgtgcctg agcatcaatg
    45721 gggttgatcc acacctcttg tgggcaggcc tgctgtaaca catcaatatt gccgtagctg
    45781 gagtgggtac gcgctttgta gtggaagccc gttaactgca gtggataggt tttccgcagg
    45841 ggatcgtccc agccatcaaa acctggggta tacgcaggaa ggggatgaat aatttcatct
    45901 tttttcaatt cccaggtatc tgcaatcttc gccagtcgtt cagaataaat ttcgattttc
    45961 cccgaaggtg ttttcaacgg gtttgcctgt ggatcttcac ggaatgcgcg gaaagcgacg
    46021 tagtgttctt ccgggcattt tttcttaaag atcccggtcg ttttcatctc ctcgtagtcg
    46081 ggcatctcag ggttacgttc cttcgttttc gcatggagat atttgatcca ttcatgctga
    46141 ctgcgacctt cagtaaaggt ttgataaacg tctggtccta agcgtttggc gacttcactc
    46201 agcatccagt agatgggttt gcgttcaaat tttgctgagg ttgcgggttg ggcgaggatc
    46261 acatagccca tattccctgc agattcatga gagataaggt cttcttgctc tgttggcatc
    46321 aggtcgggca acaggatatc gcaatactta gccgaggccg tcatgaagtg gtcaatgcca
    46381 acaatcatct cgcacttgct gtcatcctga agcacctcat gggtgtgatt gatgtcgcca
    46441 tgttgattga tcaatgtgtt actggcgtag caccataaaa acttgatggg gacatccagt
    46501 ttttcttttc cacgaacacc atcacgggtc gcggtcattt ccgtaccatg gtcgatggca
    46561 tctgtccatg taaagacgga aatctgcgtt ttaacaggat tctcgagcat cgggaaccat
    46621 tctaccccca gatcccagct accttcgcgt acacctgagt tgccgccgtt tatgccgacg
    46681 ttaccggtga gaacggaaag catggcaata gcgcgggacg tttgctcgcc gttggaatgt
    46741 cgttgtggcc cccaaccctg acaaatataa gcaggttttg ctgaaccgat ctctcgtgcc
    46801 aactggataa ttttttctgc cgggatgctg gtgatttttg ctgcccattc cggcgtttta
    46861 gctatgccgt caggcccttc gcccagaata taggcattta taatgcgcgt tacgtggtgc
    46921 gttggcgggc agcgtttttt catcgtaacc aacacaatat ttgtcgagaa atggctgatc
    46981 gaccatgttt tcagtaatca gtacccaggc aatcgcacag gccagtgcgc catcggtgcc
    47041 agggcgaatg ggcagccatt catcttcacg cccggcagct gtgtcgttat aacgtggatc
    47101 gatgacgatc atgcgtgcgt ttgaacgttc tcgggcttgc tcgacgtagt aagtgacacc
    47161 accgccgctc atccgtgttt ctgccgggtt atttccgaac ataacgacca gtttcgtatt
    47221 ggcgatatca tccgggctgt tgccatcatt ggcaccgaac atataactca ttgcggcact
    47281 gatctgtgcg gtactgtagc tgccatagcg actgagaaaa ccaccgcaag agttcatcag
    47341 acggtacggg acgttcgagt tggtgatatt ttcgccatct acgcctgttc cgtacaggac
    47401 atgtacagcc tcattgccgt aatctttcag gatccgccga agattatcac tgatggtatc
    47461 cagggcttcg tcccaactta tccgttcaaa tttaccttca ccgcgcttgc cgacgcgctt
    47521 catgggatat ttcaacctat caggatgatt catccgtcgg cggatagagc gcccgcgtaa
    47581 acacgctcga acctgatgat taccgtagac gtcgtcacct gtcgtatcag actccaccca
    47641 gtacacggtg tcatctttca catgcaaacg taacagacag aggctcccgc agttaacggt
    47701 gcaggaactc cagaccgttt tctcttctac cggagcctct gccgcccgga ccatttggga
    47761 aaatggcaga gtgaaagcac tgcttgccag cgcgagactg ccaagtgcgg aggttttcat
    47821 cagacttcta cggctgattt cagccttcat gagcgcctct gtggtatgga ttttcatcat
    47881 tactcactta ttgcttttca aacaaaatgt catgccagaa tttatggttg tcgtgggtta
    47941 tattttttcg atctcgacca gattagtgtg ctgcgggttt cccttcgcca gtggtgaagg
    48001 gcgcagagtg gttagcgtat tcacacagcc gccatggtcg attttatcgc cagacatatt
    48061 ggcctcgtgc caggctccct ggcccatagc gctaacccca gggagaatgc gtggtgtcac
    48121 tttggctggt agccgaactt cgccacgatg gttaaacacc cgcaccatat cgccgttggc
    48181 aatcccacgt ttctgtgcgt ctatagggtt gatccacacc tcctgacggc aggtagcctt
    48241 caggacatta atgttgccgt aggtcgagtg agtacgggat ttgtaatgga aaccaaacag
    48301 ttgcagtggg aaggatctac gttcagggga gtcccagcct tcaaaggttg aggcataaac
    48361 tggcagtggg cttatcactt catctttttc cagttcccag gtacgggcaa tttccgccag
    48421 cctgctggaa taaatttcaa tcttaccgga aggcgtttta agtggatttg cctcggggtc
    48481 gtcacgaaat gctttgtagg cgacaaaatg accattggga tctttacgct tatagatacc
    48541 catttttttc agttcgtcgt aagacggtaa cgccggatcc ttggcaagca ttttggcgta
    48601 cagatgttgt aaccattgtt cctgcgtgcg accttctgtg aacttttgat agacgtcagg
    48661 tccaagacgt ttcgcgactt cactcaggat ccagtaaatc ggtttacgtt cgaatttttc
    48721 gctggtgact ggctggagga aaatgagata tcccatgtta ccggcgtagt cgttaggaat
    48781 aatatcttcc tgctcaacgg tcatcaggtc tggcagcaga atgtcggcat attttgccga
    48841 tgaggtcata aagttttcga tgaccacaat catttcgcat ttcgattcgt cttgcagaat
    48901 ttcatgcgtt ttgttgatgt cagaatgctg attaaccagg gtatttcccg cgtagttcca
    48961 gatgaactta atgggcacat ccagtttatc tttgccgcgg acgccgtcgc ggattgccgt
    49021 catttgcgga ccatgatcga tagcatctgt ccagctgaag caggagattg acgttttgac
    49081 cggattatcc agcaccggca ggcgttctat ggtaatggta taggtcgatt cacgcgcgcc
    49141 actatttccg ccgctgatgc cgacattgcc cgtcaaaata ggcaacatag caatagcacg
    49201 tgcagtcagt tcgccgtttg cctggcgttg cggcccccag ccctggcaga tataagcggg
    49261 ttttgctgtg ccaatttcac gcgccagttt gatgatacgg tctaccggga taccggtaat
    49321 ttgcgaagcc cactgcggcg ttttcgctgt gttatcatca ccttcaccaa gaatataggc
    49381 tttatagtga ccattttttg gtgcatctgc gggtaaggtt ttttcgtcat agccgacgca
    49441 gtatttatcg agaaaaggtt gatcaacgag attttcgtta atcaataccc aggcaatacc
    49501 cgcaaccagc gcggcatcgg tgcccgggcg aataggaagc cattcatctt cacgaccagc
    49561 agccgtatcg gtatatcgcg gatcgataac aatcattttg gcgttcgatt tctcgcgcgc
    49621 tttttcaaga atataagtga tgccaccgcc gctcatgcgg gtttctgccg ggttgttacc
    49681 aaacatcacg accagcttgc tgttttcaat atccgtggtg ctgttgccat cattactgcc
    49741 gtaggtgtag ggcatggcac aggaaatttg cgcggtgctg taggagccat actgattgag
    49801 tgaaccgccg tagcagttca tcaggcgttt gaccgccgag gctgatggcg aagagcgggt
    49861 catattgccg caaacaatcc ccgaagagta ctgaatatat acagcctcat tgccatattg
    49921 ttcgacggtt tttttcaggc tactggcgat agtatccagg gcttcatccc agctaatccg
    49981 ttcgaatttg ccttcaccgc gtttacccac gcgtttcatt gggtaattca agcgatcggg
    50041 atgattaata caccggcgga tggagcgacc gcgcaaacag gcgcgtacct gatggttgcc
    50101 gtactcatcg ctgccggtat tgtcagtttc cacctaggtc acttcattat ctttaacatg
    50161 tagacgaagt gcacagcggc taccacagtt gacggaacag gcaccccaga tcactttttc
    50221 gctggcctgt tgtaccgctg ccgctgcact gcgcagggtg aacggtaaag aaaaaccgcc
    50281 tgcagccagc gccagagaac ctatcgcggt tgatttaacg agtgttctgc ggctgatgcc
    50341 caccattcgg tcatttttgg acataactca ctccctgttc tttatcgtta tataaatgtt
    50401 tatatattaa atatttagcg cgctaacaat agagggagtc tacccatttt gggttaagaa
    50461 ttattaatcc acatcaatag aagggtatga gtaataaggt gggattatgt tgtatgttca
    50521 aatcgccgga tgtgtcatat ccggcgttca gtcgataatg tgttactgcg gttcggcagg
    50581 cgcgccatcc tgggtagact gcgcgggagc agagacgtta ccgctggtgg tgcgggtgta
    50641 gagaatttta tgcgtatcat tagcacaatg cccgacgacc tgggaatcag gctgatcaac
    50701 ctggtcattg ggtacaatac ttaacgtgaa gctgctttcg ggtacgccat tattgataat
    50761 gcgctgtgat atatcgctct gtatgcgctc acaggatccc ggcgcggcga gtaccgcggg
    50821 tgaggcgagg gcgagcagaa gcgcggcaca gcaggttgag agtttcatca taagctcctt
    50881 acgcgaagat aacttcttta agcatagcat ttaacgtgta aagtactgta tttgctacta
    50941 tgattgagaa tcatctctac tctctggtga ctgatgtgaa atacaaatta ctgccatgct
    51001 tactcgcgat attcctcaca ggatgtgacc gcacagaggt aacactttca tttacccctg
    51061 agatggccag tttctctaat gaattcgatt ttgatccgct gcgtggtccg gtaaaagatt
    51121 tcactcagac attaatggat gagcaaggtg aagtgacgaa acgtgtttct gggactgtgt
    51181 cggaagaagg ctgttttgat tcactcgaat tactggatct ggaaaataat accgtggtcg
    51241 ctctggtact ggacgccaat tattaccgtg atgccgagac gctggagaag agagtacgtt
    51301 tacagggaaa atgccagcta gcagaattac cttctgccgg ggtgagttgg gaaaccgatg
    51361 ataatggctt cgtgattaaa gccagcagca aacaaatgca gatggaatat cgctatgatg
    51421 atcagggtta tccactgggt aaaaccacga aaagtaacga caaaacatta tctgtcagcg
    51481 ccatgccatc aacggacccg atcaaaaaat tagattacac agcggttact ttactgaata
    51541 atcaacgagt tggtaatgta aaacagagct gtgaatatga cagtcacgcc aatccggtgg
    51601 actgtcagct gatcattgtt gatgaaggag taaaacccgg cgtcgaacgg gtttacacca
    51661 tcaaaaatac gatcgattat tattaatgct attgtgcggt cggcttcagg agagtctgac
    51721 ccggtgtttt gtgctctgcc agatactgat gctggaatat acacatgcga atggcattac
    51781 gatattgacc attaataaag aactcgtgca tcaattcacc ttcaaccgaa aagccaagct
    51841 tgcggtaaat gtgaatcgct ttttcattct ctttatcaac gatcagatac agcttataga
    51901 gattgagaac ggtgaagcca tagtccattg ctaatttggc ggcacgggtt gccagacctt
    51961 tcccctgata ctccggggag ataattatct gaaattctgc gcggcgatga acatggttaa
    52021 tttccaccag ctccaccaga ccggcttttt cgccgtcaca ttccaccaca aagcgccgtt
    52081 ctctctgatc gtgaatatgc ttatcataca gatcagagag ttcaacaaag gcttcgtagg
    52141 gttcctcaaa ccagtaacgc atcacactgg cgttattgtc gagttgatgt acatagcgta
    52201 aatcttcacg ctccagcggg cgtagcttaa cactgtgggc gcttggcata acgtgtcctt
    52261 acattcctta aatcaataac aggttagggg gtaataacgc ggccagttcg acggtccagg
    52321 cagcgcaaag tatttggctc ccagtaggca ttgatgttgg cgctttgctc acatttatcg
    52381 cggttatcaa aagcggcgtc ggctttatcc cactcttttt cagtgcgttt attcactttc
    52441 tgacgcagat tgcgcgtgtc attccattgc tctttttcca tagcggcgtg ctggcggctt
    52501 tgtgcactgt cgccagactc gatcaccagt ttgttagttt cggcatgaac agttgtgctc
    52561 aatgccagtg cgcaaggcag cagaaaagcg agcaggccga ttcgtttgct gagagtgatt
    52621 ttcataattc attccctgta tgaatgatta aaggtgattc tacaccatcc actgcgaacg
    52681 caaaacgtac caagagggtg tttatattga tgatattatg tggccctata actatacatg
    52741 atgtcaataa gtgacaaaga tgattaaaac aacgttacta ttttttgcta ctgcgctgtg
    52801 tgaaattatt ggatgctttc tgccctggtt gtggttaaaa cgaaacgcca gtatctggct
    52861 gttgcttccg gcggggattt cactggcgct gtttgtctgg ttgttaacgt tgcatcctgc
    52921 ggcgagtggg cgtgtttacg cggcttatgg tggcgtttat gtctgcacgg cgttgatgtg
    52981 gctgcgcgtt gtggatggcg tgaaactgac tctttatgac tggacgggtg cgttgattgc
    53041 gctttgcggc atgttgatca ttgttgcggg ctgggggcgc acgtaggaac ataaatccat
    53101 tttatcaata agatacgagg aagtgtcagc tgacaaaagg tattctattt catcttttgt
    53161 caaccattca cagcgcaaat atacgccttt ttttgtgatc actccggctt ttttcgatct
    53221 tcatacttgt atggtagtgg ctcagttgcg tagatttcat gcatcacgac aagcgatgca
    53281 aggaatcgaa catgaagatc gtaaaggctg aagtttttgt tacctgtccg gggcgtaatt
    53341 tcgtcacatt aaaaatcacc actgaggacg gtattacggg ccttggggat gccaccctca
    53401 atggacgtga gctttccgtg gcctcttatt tgcaggatca cctttgtccg cagcttattg
    53461 gtcgcgatgc gcaccgtatc gaagatatct ggcagttttt ctataaaggt gcttactggc
    53521 gtcgcagtcc ggttacgatg tcggccattt cagcggttga tatggcgctg tgggatatta
    53581 aagccaaagc tgccaacatg ccgctttacc agttactcgg cggcgcgtct cgtgaagggg
    53641 tgatggttta ttgccatacc accggtcaca gtattgatga agctctggat gattatgccc
    53701 gtcatcagga gctgggattc aaagccatcc gcgtgcagtg cggaatccct ggtatgaaaa
    53761 ccacctacgg catgtcgaaa ggtaaaggtc tggcttatga acccgcaacc aaaggacagt
    53821 ggccggaaga gcagttgttg tagcttgcca tatttatatt taaggaatag ttatgggaaa
    53881 taatttgtta tcagcaaaag cgacactccc tgtttatgat cgtaataacc tagctccaag
    53941 aattgttcat ttaggctttg gtgcatttca ccgtgcgcat cagggcgtgt atgccgatat
    54001 tcttgctaca gaacatttca gtgactgggg atattatgag gtcaacttaa tcggcggcga
    54061 acagcaaatt gccgatttac aacagcaaga taatctttat accgttgcgg aaatgtcggc
    54121 cgatgtgtgg acggctcgcg tcgttggcgt cgttaaaaaa gccttgcacg tacagataga
    54181 tggcttagaa accgtgttgg cagcgatgtg tgaaccgcaa atcgcgattg tctctctgac
    54241 aatcaccgaa aaagggtatt tccactctcc ggcgaccgga cagttaatgc tcgatcaccc
    54301 gatggtcgct gccgacgtgc aaaatcccca ccagccgaaa acagcaacag gggtgattgt
    54361 tgaggcgctg gctcgccgta aagcggcagg acttcccgca tttaccgtca tgtcatgtga
    54421 caacatgcca gaaaacggtc atgttatgcg tgacgttgtc acttcctacg cgcaagccgt
    54481 tgatgtaaaa ctggcacaat ggatcgaaga taacgtgact ttcccatcaa caatggtgga
    54541 ccgtattgtg cccgcagtga cagaggatac gctggcgaaa atcgaacaac ttaccggtgt
    54601 gcgcgatcct gcgggcgttg cctgtgaacc tttccgccag tgggtaatag aagataactt
    54661 tgttgccgga cgtccggaat gggaaaaagc gggagccgaa ctggttagcg atgtgctgcc
    54721 ttatgaagag atgaagttgc gcatgctcaa cggcagtcat tcattcctgg cgtatctggg
    54781 gtatcttgcc ggatatcagc acattaatga ctgcatggaa gatgaacatt atcgttatgc
    54841 ggcgtatggc ttgatgttgc aggaacaagc gccgacgctg aaagtacagg gcgttgattt
    54901 gcaggattac gctaacagat taattgcacg ctatagcaac ccggcgttac gtcatcgaac
    54961 ctggcagatt gcgatggatg gcagccagaa attgccacag cggatgttgg attctgttcg
    55021 ctggcatctg gcgcatgaca gcaagttcga tctgctggcg ctgggcgtcg cgggttggat
    55081 gcgttatgtc ggtggtgttg atgaacaggg aaatccgata gaaatcagtg acccactgtt
    55141 acctgttatt cagaaggctg tacaaagtag tgccgaaggg aaagcgcgcg tccagtcatt
    55201 gctggcgatt aaggcgattt ttggtgatga tttgccagac aatagcttgt ttactgcaaa
    55261 agtgacggaa gcgtacttgt ctttattagc gcatggcgcg aaagcgaccg tggcaaaata
    55321 ttccgtgaag taaaaaaagc aatgccgcca tcggcggcat tcacacgctt agttcatgcc
    55381 gagacgaatc aggtccagtg gtgccagttt ctcttcacaa ccttcaacaa ctacggtttt
    55441 tccgcggcgg atttgctcag cggtcagacc ttcagtatca atcgacagga tcttgccagt
    55501 gtgaccggtg ccgctaacca taacacggct gccagtggtg attgcgttac ggttacgatc
    55561 gtaggtcgtc ataggtgttt tctcctttct gatttacagt cgaagcccac gtaacgggcg
    55621 caatataaat actcctgtcg agtgaaatat tttttgtttt tgatcaagct cacatctttt
    55681 ttgatgcatg catgaaccat aaggcggggg taaagactct catcccggat gggatgagag
    55741 gaaatgaatt actcttcgct aaaccagtcg ctgttttcct ggcggatctg gcgcacggat
    55801 tcgctgattt cctgcaaatg ttgcgtcatt gcacgttcta ccgcatcgcc atcacgtttt
    55861 tgcaaggcag agaaaatatc aagatgctgg cgtaacagca tttctggtgg agaaacgtgg
    55921 tcgaaactca tatagcgcac gcgatcaacg gtcgctttca ggttctcaat ggtatcccac
    55981 gccagttgac agtcggcaat ttgcgtcagg agttgatgga agttgtcatc aagttcaaaa
    56041 aaatcatcca gttgcttgcg ctcaatggca atgcgttgct ggtgaagatt ttgttccagt
    56101 tggtagcact ggctttcggt aatcatgctc gccgcccgac gcgccaccgc gcactcaatg
    56161 gcctgacgga taaaactgcc gttgcgcacc tgggccatgg aaattttgtt gacgtagctg
    56221 ccacgctgcg gacgaatttg aatcaggccg ttttccgcca gtttaataaa ggcttcacga
    56281 accggctggc gtgacacatt gaaacgaaca gaaacttctt tttccgacaa cggtgtgcct
    56341 ggtgcaatca ggcaatggac aatgtcgcga cgaagaatac gataaatctg ctgattgaca
    56401 ggctgtgtgg gattaagttg cgtttcgacg gtcattcgtt cttgcttgtg agtgagttaa
    56461 ctgcatgagt ctaccacttt tttgtgacaa gcaataaccc ggcagttacg ccgggtataa
    56521 aaattactga cggtggacat tcagtccggc atagctttgg gtaaccggca tcatttccag
    56581 ggtattgata ttgacgtgag caggcagcgt tgacacccac cagacggctt cgctgacatc
    56641 ttctggcgtc aatgcaacgg tattttgata ggttttttcc gctttaccat catcgccttt
    56701 aaagcggaca ttggaaaact cggtgccacc caccagaccc ggttcgatgt cggtgacgcg
    56761 caccgccgta ccatgcagat ccgtacgcag attcaggcta aactgacgaa caaacgcttt
    56821 cgtcgcaccg taaacgttac caccggcata cggccagttg cctgccgttg agccaatgtt
    56881 aataatatga ccatgattac gttcaaccat acccggtaag acggcgcgcg tcatatatac
    56941 caggcctttg ttgttggtat caatcatcgt ttcccagtct tcaacgctgg ctttatgcgc
    57001 aggctccatg cccaacgcca ggccggcatt atttaccagg atatcaatat tgctccactc
    57061 ggcagggagc gatgccagca tctcttcaat agcggcgcgg ttgcgaacgt ccagttgggc
    57121 gatatacaga ttatctccca gttcgtcttt taactcctgc aaccgctcct ggcgacggcc
    57181 agtggcgata actttatgcc cttgttgaat aaaacgacga gtaatgcatt caccaaaacc
    57241 tgccgttgct ccagttacta aaacgatcat ctcactgttc ctcaacgctt ttgtgtgtca
    57301 ataacatagc acgtgatgct taagagcggg taatactggt ttgcaagatt gcactccgtt
    57361 atcagtaagc ctacgctatg gaacacctcg cgttcaggag aagaaaatga caacaatgaa
    57421 tcctttcctt gtgcaaagca cactgccgta tctggctcct cattttgatc aaattgccaa
    57481 tcatcactat cgcccggcat tcgatgaggg aatgcagcaa aagcgggcag aaattgctgc
    57541 tatcgcgctt aacccgcaaa cgcctgattt caacaatact attctggcac tggaacaaag
    57601 cggagaatta cttacccgcg ttaccagcgt cttttttgcg atgactgcgg cgcataccaa
    57661 tgatgaatta cagcgtcttg atgaacagtt ttccgctgaa ctggcggaac tggctaatga
    57721 tatctatctg aacggtgaat tattcgcgcg ggtagatgct gtctggcaga gccgtgaatc
    57781 cctggggctt gatagtgaat ccatccgcct ggtggagatt attcatcaac gttttgtcct
    57841 tgccggagcc aaacttgcac aagctgataa agcaaaatta aaagtactga atacagaagc
    57901 tgcgaccctg accagccagt ttaaccagcg gttacttgca gcaaataaat ccggcggtct
    57961 ggttgtgaac gatatcgcgc aactggcagg aatgagtgag caagagattg cgctggcggc
    58021 agaggcggct cgcgagaaag gtctggataa caaatggctg attccgctgc tgaataccac
    58081 ccaacaaccg gcgcttgccg aaatgcgcga tcgtgcgacg cgtgaaaaac tgtttattgc
    58141 gggctggacg cgagcggaaa aaaatgatgc caatgatacc cgcgctatca ttcaacgtct
    58201 ggtggagatc cgtgcacaac aggcaacact acttggtttt cctcattatg ccgcatggaa
    58261 aatcgccgat cagatggcaa aaacacctga agcagcactt aactttatgc gggaaattgt
    58321 tccagcggcg cgtcaacgtg cgagcgatga attagcctcc atacaggcgg ttatcgataa
    58381 gcagcagggc gggtttagcg cgcagccgtg ggactgggca ttttatgcgg aacaggtacg
    58441 gcgggagaaa tttgatcttg atgaggcgca gctcaagcca tattttgaat taaacacggt
    58501 gttaaatgaa ggtgtattct ggaccgcgaa tcagctcttc ggtattaagt ttgtcgaacg
    58561 ttttgatatt cctgtctacc atcctgacgt tcgtgtgtgg gaaatttttg atcataatgg
    58621 cgtgggactg gcgttatttt acggtgattt cttcgcccgt gattcaaaaa gcggcggtgc
    58681 atggatgggc aattttgttg agcaatcaac gcttaatgaa acgcatcagg taatttataa
    58741 cgtttgcaat tatcagaaac ccgctgctgg tgagcctgcg ttgttactct gggatgatgt
    58801 cataacctta ttccatgaat ttggtcatac gctgcacggc ctctttgccc gccagcgtta
    58861 tgccacgctt tccggcacca acacgccgcg tgattttgtc gaatttccgt cgcaaatcaa
    58921 cgaacactgg gcaacgcatc cgcaggtatt cgctcgctac gcccggcatt atcagagcgg
    58981 ggcagcaatg cctgacgaac tgcaacagaa aatgcgtaat gccagcctgt tcaacaaagg
    59041 gtatgagatg agcgaactgc ttagcgccgc acttctcgat atgcgctggc attgcctgga
    59101 agaaaacgaa gcaatgcagg atgtcgatga ttttgaattg cgggcgctgg tggcggaaaa
    59161 tatggatctt cctgctatac cgccacgcta tcgcagcagt tatttcgccc atatttttgg
    59221 tggcggatat gctgcaggtt attacgctta tctgtggacg caaatgttgg ccgatgatgg
    59281 ttaccagtgg tttgttgagc agggcggatt aacgcgtgaa aatgggcagc gttttcgcga
    59341 ggcgatcctt tccagaggta acagcgaaga tctggaacgt ctgtatcgac aatggcgcgg
    59401 taaggctcct cagattatgc cgatgctgca acatcgtggc ttgaacatat aaacaccacc
    59461 aatggctggc ctggagatat cgccaggcca gcctggttat agcagtaatt gcagcagctg
    59521 ggcgagggca aacctcaccg ctaaagctaa taccgtttcg cagtcgccag caaaatgcat
    59581 aaccgcagtg tagttctggc ctttaatatg ccacgcaaac cagacggtac ccgctggcgt
    59641 accatcttca ccgccctccg gtccgccgta gccggtaatg gcaatactga catcagcatc
    59701 cgcacgctct atggcaccgg ttgccatttc tgctgccact ttctcactca ccgcagaata
    59761 tcgttcaaga gactgctggc ttacgctgag gattttcatc tttgcctgat cggtgaaagt
    59821 aacaaagcct gcaccgtaaa atttgggtgt atcttcaact gcacacaggg cgctagccaa
    59881 cttaccgccg gtgcatgatt cggcggtagt taagcgtaat tgatccgcga taagtctttg
    59941 actcaacgcg gatgtcaggt tttcaatagt gtcggtatct gcgagttgta caattttatc
    60001 tttattaatg ttcactgttt tttgtccacg ctattatatg taaaggtgat ttgctttttc
    60061 tgtatgctcg tccaatataa taattttcaa acatataaat ccgattattc tgaaaatatg
    60121 tttaagactc ttcaatcttc ttaactttag tgagttaaat tctctgaata tttga
//
LOCUS       DAJVTL010000006        59637 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.006, whole genome shotgun sequence.
ACCESSION   DAJVTL010000006 DAJVTL010000000
VERSION     DAJVTL010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 59637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 59637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..59637
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.006"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(67..1221)
                     /gene="metK"
                     /locus_tag="OQQ26_000347"
     CDS             complement(67..1221)
                     /gene="metK"
                     /locus_tag="OQQ26_000347"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HCS1855946.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
                     SATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKADKAQLLRDAAGLK"
     gene            complement(1525..1740)
                     /locus_tag="OQQ26_000348"
     CDS             complement(1525..1740)
                     /locus_tag="OQQ26_000348"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855947.1"
                     /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV
                     KTNPQAKTLISTRLEVATRKKRRVLFI"
     gene            1876..2007
                     /gene="yqgB"
                     /locus_tag="OQQ26_000349"
     CDS             1876..2007
                     /gene="yqgB"
                     /locus_tag="OQQ26_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417414.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HCS1855948.1"
                     /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII"
     gene            2016..3992
                     /gene="speA"
                     /locus_tag="OQQ26_000350"
     CDS             2016..3992
                     /gene="speA"
                     /locus_tag="OQQ26_000350"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HCS1855949.1"
                     /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE
                     DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF
                     RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE"
     gene            4138..4869
                     /locus_tag="OQQ26_000351"
     CDS             4138..4869
                     /locus_tag="OQQ26_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855950.1"
                     /translation="MKKWKVRSALVALIVLLAGCSSNAQYNSSASGNVGTAWGGDVHS
                     TVQGVSAERAWRDPAEMIVISYSTNVPSGYDRVYSIRISELEYAIRDGNFNSLPITRV
                     YDSSNNEPRYIVHARVGMNYQLYVRNYSCNTNYEIVATVDGLDVLNGKQGSLNNNGYI
                     VNAGDSLAIKGFRKDKHTEAAFQFANVADSYAANSAQGDVRNTGVIGFAAFELQGQAQ
                     NALPPCSGQAFPADNNGYAPPPCRK"
     gene            5004..5924
                     /gene="speB"
                     /locus_tag="OQQ26_000352"
     CDS             5004..5924
                     /gene="speB"
                     /locus_tag="OQQ26_000352"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HCS1855951.1"
                     /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(6131..6889)
                     /gene="loiP"
                     /locus_tag="OQQ26_000353"
                     /gene_synonym="yggG"
     CDS             complement(6131..6889)
                     /gene="loiP"
                     /locus_tag="OQQ26_000353"
                     /gene_synonym="yggG"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease LoiP"
                     /protein_id="HCS1855952.1"
                     /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ
                     VKALSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
                     GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA
                     KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK"
     gene            7167..9158
                     /gene="tkt"
                     /locus_tag="OQQ26_000354"
     CDS             7167..9158
                     /gene="tkt"
                     /locus_tag="OQQ26_000354"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCS1855953.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
                     HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
                     SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
                     LNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL"
     gene            9472..9915
                     /gene="cmtB"
                     /locus_tag="OQQ26_000355"
     CDS             9472..9915
                     /gene="cmtB"
                     /locus_tag="OQQ26_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IIA"
                     /protein_id="HCS1855954.1"
                     /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMASLLDKNYIRENYIQ
                     AIKDSTINNGPYYILAPGVAMPHARPECGALTTGMSLTLLKQGVYFPGNDEPIKLLIG
                     LSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLSDIISRG"
     gene            9943..11138
                     /locus_tag="OQQ26_000356"
                     /pseudo
     CDS             9943..11138
                     /locus_tag="OQQ26_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311835.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
     gene            11153..12430
                     /locus_tag="OQQ26_000357"
     CDS             11153..12430
                     /locus_tag="OQQ26_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HCS1855955.1"
                     /translation="MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWK
                     AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG
                     YSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYH
                     TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV
                     QKLLPVELAASKGIELVYVNTKGMSDPVQMLRALTGDVGFDDIFVYAAVPAVVEMADE
                     LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL
                     QPSFMVTHIGGLDAVPETVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE
                     LARLVEETHGIWNEQAEKYLLAQFGVDIGEAAQ"
     gene            12427..13392
                     /gene="yggF"
                     /locus_tag="OQQ26_000358"
                     /pseudo
     CDS             12427..13392
                     /gene="yggF"
                     /locus_tag="OQQ26_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417405.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
     gene            13414..13923
                     /gene="fumE"
                     /locus_tag="OQQ26_000359"
                     /pseudo
     CDS             13414..13923
                     /gene="fumE"
                     /locus_tag="OQQ26_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708693.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fumarase E"
     gene            13920..14633
                     /locus_tag="OQQ26_000360"
     CDS             13920..14633
                     /locus_tag="OQQ26_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
                     /protein_id="HCS1855956.1"
                     /translation="MKIELTVNGLKVQAQYSDDEIENVHKPLLRMLAAIQAVSPQRRT
                     VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
                     PETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
                     WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEES
                     LPANLTLMMTATGEYRLVD"
     gene            complement(14605..15282)
                     /locus_tag="OQQ26_000361"
     CDS             complement(14605..15282)
                     /locus_tag="OQQ26_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HCS1855957.1"
                     /translation="MLTLNQISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
                     LLRVMAGLLTPTAGTVMLQQQAMKNLKNLQRAAKIGVLFQEAENQLFHSTVADEIAFG
                     LKLQKCPADEITQRTHAALQCCQLADTANAHPLDLHSAQRRMVAVACLEALSPPLLLL
                     DEPSRDFDENWLSVFESWLEKCGQRGTSVVAISHDAAFTRRHFSRVVRLEDGLIRNVN
                     PPDDIHP"
     gene            complement(15276..15954)
                     /locus_tag="OQQ26_000362"
                     /pseudo
     CDS             complement(15276..15954)
                     /locus_tag="OQQ26_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311829.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
     gene            complement(15942..16649)
                     /locus_tag="OQQ26_000363"
     CDS             complement(15942..16649)
                     /locus_tag="OQQ26_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HCS1855958.1"
                     /translation="MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATR
                     RRAKYVVWLMFSLGAGLWLVHGGWLTEWLSGTPRSPERWTHAITLWLRILAIVSTSQL
                     WMQYVPVQCFIRALFASRLPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEG
                     WYQRLRAMPALIIPLTHNALNDLAVRGAALDMWAFRIHNRRTTLWAPADSTLQRVARY
                     TMILLMLTEFGAWIWLR"
     gene            complement(16650..17228)
                     /locus_tag="OQQ26_000364"
     CDS             complement(16650..17228)
                     /locus_tag="OQQ26_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HCS1855959.1"
                     /translation="MARRHFSSQVLVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
                     SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKTLTAVIVWLLLRQLPIRTTRHFPAMAAVR"
     gene            complement(17251..17682)
                     /locus_tag="OQQ26_000365"
     CDS             complement(17251..17682)
                     /locus_tag="OQQ26_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCS1855960.1"
                     /translation="MMTLPYPYSSPARFYALRLLPGQEVFSQLHAFAQQQQLHAAWIA
                     GSTGSLTDIALRYAGQEGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHM
                     MPGCTVRTTLELMIGCLEELAFSRQPCALSGYDELHISPVK"
     gene            18054..19073
                     /gene="epd"
                     /locus_tag="OQQ26_000366"
     CDS             18054..19073
                     /gene="epd"
                     /locus_tag="OQQ26_000366"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HCS1855961.1"
                     /translation="MTVRVAINGFGRIGRNVVRALYESGRRTEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
                     YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
                     ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
                     DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     TVAFR"
     gene            19123..20286
                     /gene="pgk"
                     /locus_tag="OQQ26_000367"
     CDS             19123..20286
                     /gene="pgk"
                     /locus_tag="OQQ26_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HCS1855962.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND
                     VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
     gene            20501..21580
                     /gene="fbaA"
                     /locus_tag="OQQ26_000368"
     CDS             20501..21580
                     /gene="fbaA"
                     /locus_tag="OQQ26_000368"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HCS1855963.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKANNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
                     YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFQELNAIDVL"
     gene            21938..22798
                     /gene="mscS"
                     /locus_tag="OQQ26_000369"
     CDS             21938..22798
                     /gene="mscS"
                     /locus_tag="OQQ26_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HCS1855964.1"
                     /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
                     ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
                     KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
                     REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKEDKAA"
     gene            22937..23572
                     /gene="argO"
                     /locus_tag="OQQ26_000370"
     CDS             22937..23572
                     /gene="argO"
                     /locus_tag="OQQ26_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
                     /protein_id="HCS1855965.1"
                     /translation="MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCA
                     ISDLVLICAGIFGGSALLMQSPWLLALVTWGGVAFLLWYGFGAFKTAMSSNIELASAE
                     VLKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWF
                     FGLAILAAWLAPRLRTAKSQRIINLVVGCVMWFIALQLARDGIAHAQALFS"
     gene            23665..24405
                     /locus_tag="OQQ26_000371"
     CDS             23665..24405
                     /locus_tag="OQQ26_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HCS1855966.1"
                     /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
                     AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
     gene            24572..25468
                     /locus_tag="OQQ26_000372"
     CDS             24572..25468
                     /locus_tag="OQQ26_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1855967.1"
                     /translation="MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEE
                     QIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT
                     YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISQQHVSARVQELEN
                     LTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGIN
                     PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHKPMYMQEYLYSI
                     RNHRYTATMLQHIAEDRDGTNH"
     gene            complement(25465..26943)
                     /gene="scpC"
                     /locus_tag="OQQ26_000373"
                     /pseudo
     CDS             complement(25465..26943)
                     /gene="scpC"
                     /locus_tag="OQQ26_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA:succinate CoA transferase"
     gene            complement(26967..27758)
                     /gene="scpB"
                     /locus_tag="OQQ26_000374"
     CDS             complement(26967..27758)
                     /gene="scpB"
                     /locus_tag="OQQ26_000374"
                     /EC_number="7.2.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA decarboxylase"
                     /protein_id="HCS1855968.1"
                     /translation="MFTSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSD
                     LNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPII
                     SMVEGSVWGGAFEMIMSSDLIIAANTSTFSMTPVNLGVPYNLVGIHNLTRDTGFHIVK
                     ELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVL
                     GEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
     gene            complement(27763..28758)
                     /gene="meaB"
                     /locus_tag="OQQ26_000375"
     CDS             complement(27763..28758)
                     /gene="meaB"
                     /locus_tag="OQQ26_000375"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HCS1855969.1"
                     /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
                     DAIMPFCGNALRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
                     GDKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS
                     ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYE
                     SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVE
                     WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTHSPRTGLRQLSEFIQTQYFD"
     gene            complement(28751..30895)
                     /gene="scpA"
                     /locus_tag="OQQ26_000376"
     CDS             complement(28751..30895)
                     /gene="scpA"
                     /locus_tag="OQQ26_000376"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HCS1855970.1"
                     /translation="MSNVQEWQQLANKELSRREKTVDSLVQQTAEGIAIKPLYTEADL
                     DNLEVTGTLPGLPPYVRGPRATMYTVQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGL
                     SVAFDLATHRGYDSDNPRVAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAV
                     LPVLAFYIVAAEEQGVTPDKLTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIARCS
                     GNMPRFNTISISGYHIGEAGANCVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFF
                     FGIGMDLFMNVAMLRAARYLWSEAVSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNV
                     IRTTIEALVATLGGTQSLHTNAFDEALGLPTDFSARIARNTQIIIQEESELCRTVDPL
                     AGSYYVESLTDQIVKQARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQSLIDQGK
                     RVIVGVNKYKLDHEDETDVLEIDNVMVHNEQIASLERIRATRDDAAVTAALNALTHAA
                     QHNENLLAAAVNAARVRATLGEISDALEAAFDRYLVPSQCVTGVIAQSYHQSEKSASE
                     FDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRGAKVIASAYSDLGFDVDLSPMFSTP
                     EEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAF
                     LQERGVAAIYGPGTPMLDSVRDVLNLISQHHD"
     gene            complement(31099..31992)
                     /gene="argP"
                     /locus_tag="OQQ26_000377"
     CDS             complement(31099..31992)
                     /gene="argP"
                     /locus_tag="OQQ26_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator ArgP"
                     /protein_id="HCS1855971.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
                     RMMRKVTDALLDYGHKVLRQD"
     gene            32363..33022
                     /gene="rpiA"
                     /locus_tag="OQQ26_000378"
     CDS             32363..33022
                     /gene="rpiA"
                     /locus_tag="OQQ26_000378"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HCS1855972.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQMVKLGGRPEYRQGV
                     VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            33278..34510
                     /gene="serA"
                     /locus_tag="OQQ26_000379"
     CDS             33278..34510
                     /gene="serA"
                     /locus_tag="OQQ26_000379"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HCS1855973.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
                     EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
                     NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
                     ALQAMKAIPGTIRARLLY"
     gene            34738..34797
                     /gene="ibsC"
                     /locus_tag="OQQ26_000380"
     CDS             34738..34797
                     /gene="ibsC"
                     /locus_tag="OQQ26_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsC"
                     /protein_id="HCS1855974.1"
                     /translation="MMRLVIILIVLLLISFSAY"
     gene            complement(34898..35500)
                     /locus_tag="OQQ26_000381"
     CDS             complement(34898..35500)
                     /locus_tag="OQQ26_000381"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HCS1855975.1"
                     /translation="MTQLPELPLILSRQEIRKMIRQRRRALTPEQQQEMGQQAATRMM
                     TYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQ
                     SELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQ
                     HYKMQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW"
     gene            complement(35521..35704)
                     /gene="ssrS"
                     /locus_tag="OQQ26_000382"
     ncRNA           complement(35521..35704)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="OQQ26_000382"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(35746..36075)
                     /gene="zapA"
                     /locus_tag="OQQ26_000383"
     CDS             complement(35746..36075)
                     /gene="zapA"
                     /locus_tag="OQQ26_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HCS1855976.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
                     TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
                     KTNQNFE"
     gene            36243..36821
                     /gene="ygfB"
                     /locus_tag="OQQ26_000384"
     CDS             36243..36821
                     /gene="ygfB"
                     /locus_tag="OQQ26_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YgfB"
                     /protein_id="HCS1855977.1"
                     /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
                     SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
     gene            36847..38172
                     /gene="pepP"
                     /locus_tag="OQQ26_000385"
     CDS             36847..38172
                     /gene="pepP"
                     /locus_tag="OQQ26_000385"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HCS1855978.1"
                     /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTHSADSEYPY
                     RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
                     LGVDRAQAFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVNSALEKLRKGSRQNLTAP
                     ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH
                     EFNRHGARYPSYNTIVGSGENGCILHYTENESELRDGDLVLIDAGCEYKGYAGDITRT
                     FPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKG
                     DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
                     ADVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
     gene            38169..39347
                     /gene="ubiH"
                     /locus_tag="OQQ26_000386"
                     /gene_synonym="visB"
     CDS             38169..39347
                     /gene="ubiH"
                     /locus_tag="OQQ26_000386"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HCS1855979.1"
                     /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
                     FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
                     GQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVA
                     ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
                     RCSLVWCHPLERREELLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARA
                     ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAQERGEDMGDYGVLCRYQQ
                     RRQSDREATIGVTDSLVHLFANRWTPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
                     "
     gene            39370..40572
                     /gene="ubiI"
                     /locus_tag="OQQ26_000387"
                     /gene_synonym="visC"
     CDS             39370..40572
                     /gene="ubiI"
                     /locus_tag="OQQ26_000387"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HCS1855980.1"
                     /translation="MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAVDA
                     LPQLRVSAINAASEKLLTRLGVWQDILARRASCYHGMEVWDKDSFGHISFDDQSMGYS
                     HLGHIVENSVIHYALWNKAQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV
                     IGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPEEAQRMQQAGEDEFNRALNIAFDNRLGLCKVESERQVFPLTGRYA
                     RQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
                     YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
                     NDLPEWLR"
     gene            complement(40646..40729)
                     /locus_tag="OQQ26_000388"
     CDS             complement(40646..40729)
                     /locus_tag="OQQ26_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855981.1"
                     /translation="MSKNTKSKNHDIRKYNAKTEVKLVYFK"
     gene            41020..42114
                     /gene="gcvT"
                     /locus_tag="OQQ26_000389"
     CDS             41020..42114
                     /gene="gcvT"
                     /locus_tag="OQQ26_000389"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HCS1855982.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
                     GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLAKSGKALYSGMLNASGGVIDDLIVY
                     YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
                     NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH
                     GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            42138..42527
                     /gene="gcvH"
                     /locus_tag="OQQ26_000390"
     CDS             42138..42527
                     /gene="gcvH"
                     /locus_tag="OQQ26_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HCS1855983.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            42646..45519
                     /gene="gcvP"
                     /locus_tag="OQQ26_000391"
     CDS             42646..45519
                     /gene="gcvP"
                     /locus_tag="OQQ26_000391"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HCS1855984.1"
                     /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
                     IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPLVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
                     QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
                     TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
                     AFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
                     YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCIPISEYQ"
     gene            45785..46528
                     /locus_tag="OQQ26_000392"
     CDS             45785..46528
                     /locus_tag="OQQ26_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1855985.1"
                     /translation="MAIALVTGGSRGIGRATALLLAKEEYTVAVNYQQNLHAAQEVVN
                     LITQAGGKAFVLQADISDENQVIAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAE
                     RINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASK
                     GAIDTLTTGLSLEVAAQGGRVNCVRLGFIFTEMHASGGEPGRVDRVKSNIPMQRGGQA
                     EEVAQAIVWLLSDKASYVTGSFIDLAGGK"
     gene            complement(46585..48018)
                     /gene="bglA"
                     /locus_tag="OQQ26_000393"
     CDS             complement(46585..48018)
                     /gene="bglA"
                     /locus_tag="OQQ26_000393"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase BglA"
                     /protein_id="HCS1855986.1"
                     /translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHG
                     VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
                     QPNEEGLKFYDSLFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFV
                     ASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDMQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLDVLRKGTCDYLGFSYYMTNAVKAEGGTGDAISGFE
                     GSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            48063..48374
                     /locus_tag="OQQ26_000394"
     CDS             48063..48374
                     /locus_tag="OQQ26_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HCS1855987.1"
                     /translation="MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRF
                     EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKC
                     L"
     gene            48538..49197
                     /locus_tag="OQQ26_000395"
     CDS             48538..49197
                     /locus_tag="OQQ26_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HCS1855988.1"
                     /translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL
                     NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF
                     LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA
                     VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQ
                     A"
     gene            complement(49274..50254)
                     /gene="ygfZ"
                     /locus_tag="OQQ26_000396"
     CDS             complement(49274..50254)
                     /gene="ygfZ"
                     /locus_tag="OQQ26_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HCS1855989.1"
                     /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
                     VTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
                     VFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSREKQVVKEGATTLLWFGHPAER
                     FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLTGSASRLPEAGEDLELKMGENWRRT
                     GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
     gene            50497..50763
                     /gene="sdhE"
                     /locus_tag="OQQ26_000397"
     CDS             50497..50763
                     /gene="sdhE"
                     /locus_tag="OQQ26_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HCS1855990.1"
                     /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
                     RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI"
     gene            50744..51157
                     /locus_tag="OQQ26_000398"
     CDS             50744..51157
                     /locus_tag="OQQ26_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000244782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HCS1855991.1"
                     /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
                     LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
                     SGKRQHLWLAADSMDEAEWRDLRRILLQQETQRSR"
     gene            complement(51191..51712)
                     /gene="fldB"
                     /locus_tag="OQQ26_000399"
     CDS             complement(51191..51712)
                     /gene="fldB"
                     /locus_tag="OQQ26_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HCS1855992.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
                     QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG
                     MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADRQLFVGLALDETNQYDLSDERIQSW
                     CEQILNEMAEHYA"
     gene            51824..52720
                     /gene="xerD"
                     /locus_tag="OQQ26_000400"
     CDS             51824..52720
                     /gene="xerD"
                     /locus_tag="OQQ26_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HCS1855993.1"
                     /translation="MKQNLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
                     LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            52745..53455
                     /gene="dsbC"
                     /locus_tag="OQQ26_000401"
     CDS             52745..53455
                     /gene="dsbC"
                     /locus_tag="OQQ26_000401"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HCS1855994.1"
                     /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
                     AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYK
                     APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIW
                     CAKDKNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQP
                     PKDMKEFLDEHQKMTSGK"
     gene            53461..55194
                     /gene="recJ"
                     /locus_tag="OQQ26_000402"
     CDS             53461..55194
                     /gene="recJ"
                     /locus_tag="OQQ26_000402"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HCS1855995.1"
                     /translation="MKQQIQLRRRAVDETADLPAELPPLLRRLYASRGVRSAQELERS
                     VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN
                     IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
                     HHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
                     IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
                     KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
                     GMQVEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
                     ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
                     LQIIIDNIWPI"
     gene            55285..56383
                     /gene="prfB"
                     /locus_tag="OQQ26_000403"
     CDS             join(55285..55359,55361..56383)
                     /gene="prfB"
                     /locus_tag="OQQ26_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HCS1855996.1"
                     /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQP
                     DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE
                     LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG
                     FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            56393..57910
                     /gene="lysS"
                     /locus_tag="OQQ26_000404"
     CDS             56393..57910
                     /gene="lysS"
                     /locus_tag="OQQ26_000404"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HCS1855997.1"
                     /translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
                     TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
                     AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMHEAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE
                     YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(57954..58502)
                     /gene="idi"
                     /locus_tag="OQQ26_000405"
     CDS             complement(57954..58502)
                     /gene="idi"
                     /locus_tag="OQQ26_000405"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HCS1855998.1"
                     /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKG
                     QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF
                     RYRATDPNGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP
                     WMVMQATNREARKRLSAFTQLK"
     gene            58557..58628
                     /locus_tag="OQQ26_000406"
     CDS             58557..58628
                     /locus_tag="OQQ26_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1855999.1"
                     /translation="MINQVSVYRQPPVLSGCRQVKTI"
     gene            complement(58625..58750)
                     /locus_tag="OQQ26_000407"
     CDS             complement(58625..58750)
                     /locus_tag="OQQ26_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856000.1"
                     /translation="MNFLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF"
     gene            complement(58752..59612)
                     /gene="uacT"
                     /locus_tag="OQQ26_000408"
                     /pseudo
     CDS             complement(58752..59612)
                     /gene="uacT"
                     /locus_tag="OQQ26_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417364.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="urate/proton symporter UacT"
BASE COUNT        14265 a        14928 c        16029 g        14415 t
ORIGIN      
        1 tcaactgatc cttaactgat cggcattaca gcgcgaggct ggcctttgaa agcaggtgaa
       61 gaaagattac ttcagaccgg cagcatcgcg cagcagctgc gctttgtcgg ctttttccca
      121 cgggaaatgt tcacgaccaa agtgaccgta tgctgcggtt tctttgtaga tcgggtgcag
      181 cagatccagc atctgaatca gaccgtatgg gcgcaggtcg aagaactcac gtaccagcag
      241 agtcagttgt tcagaaggca ctttctcagt accgaaagtt tctaccatga tggaagtcgg
      301 ttcagccacg ccgattgcgt aggaaacctg aatttcacaa cgatcggcca ggccagcagc
      361 aacgatgttt ttcgcgacat aacgtgctgc gtaggctgcg gaacggtcca cttttgatgg
      421 atctttacca gagaatgcac cgccaccgtg acgtgccatg ccgccgtagg tatcaacgat
      481 aattttacga ccagtcagac cgcagtcacc catcgggcca ccgataacga aacgaccagt
      541 cgggttgatg aagaatttgg tggcagaagt cagccattca gcgggcagaa tcggcttgat
      601 gatctcttcc attaccgctt cttgcagcga tttctggtcg atttcttcag agtgctgagt
      661 ggaaagcacg acagcatcga taccaacgat tttgccgtcg tcatactgga aagtcacctg
      721 gcttttcgca tccgggcgca gccacggcag agtgccgttt ttacgcactt cagcctgacg
      781 ctgtaccaga cggtgtgcat aggtgatagg tgctggcatc agcacgtcgg tttcattagt
      841 tgcgtagcca aacatcagac cctggtcacc cgcgccctgt tccagcggat cggcacggtc
      901 aacgccctgg ttgatgtcag gagactgttt gccgatggcg ctcagaaccg cacaggagtt
      961 agcgtcaaag cccatgtcgg aatgcacata gccaatttcg cgaacggtgt tacgggtgat
     1021 ctcttcgatg tctacccagg cgctggtggt gatttcgccg ccaactaaaa ccatgccggt
     1081 ttttacgtag gtttcgcaag caacgcgtgc tttcggatcc tgttcgagga tcgcgtctaa
     1141 aacggcatca gagatttggt cagcaatttt gtcaggatgc ccttcagaga cggactcgga
     1201 cgtaaaaagg tgttttgcca tatttaatat cacctaaaga gaatttggtt agctcaaact
     1261 gttgtgtgga ttttctgtgg tagcggatcc taccacgact ctgcaggtta aaaacactgg
     1321 cagtctgagt gttaatcggt atggatggat taacatctgg atggctattt taggtcaatt
     1381 cttcacccga tttccacttt tttttgaatc gtgtctcatt ctgttaaaaa cgtggctgga
     1441 aatttttcct gacaatgccg gcattctgcg tatttatctt ttgcaatttt ctgccattgt
     1501 ggggtataaa acgcggcgcg cggcttaaat aaaaagcaca cgacgtttct ttcgtgttgc
     1561 cacttccagc cgggttgaaa tcagagtttt ggcttgtggg ttcgtcttaa caggcggccg
     1621 tggaggtgat acgaaataat gaaccgttgt ctgctgctta acctgtctca ccgttctggt
     1681 gaagattcgt tccccgcact ctgcatctct gctttgcata cctgccgatg ttatacccat
     1741 ctcggcgctt ctcaggattc aagagctggt tacagttact gaggactgaa caagggcgct
     1801 cttgtaaaaa caagagtttt ctcgtggttt cgccgaactg tcacacttac gttcggttat
     1861 gtgcttaata atgttatgaa aaagaaaccg gttgcgcagt tggagcgtca gcattcactg
     1921 ctggaaaatc catgtgctta tgggttgtta tcgcagttcc aggctgcgat agtcgttaac
     1981 tgttttacac ttaataaaat aatttgaggt tcgctatgtc tgacgacatg tctatgggtt
     2041 tgccttcgtc agcgggcgaa cacggtgtac tacgctccat gcaggaggtt gcaatgagct
     2101 cccaggaagc cagcaagatg ctgcgtactt acaatattgc ctggtggggc aataactact
     2161 atgacgttaa cgagctgggc cacatcagcg tgtgcccgga cccggacgtc ccggaagctc
     2221 gcgtcgatct cgcgcagtta gtgaaaactc gtgaagcaca gggtcagcgt ttgcctgcac
     2281 tgttctgttt cccacagatc ctgcagcacc gtttgcgttc cattaacgcc gcgttcaaac
     2341 gtgcgcggga atcctacggc tataacggcg attacttcct cgtttatccg atcaaagtta
     2401 accagcaccg ccgcgtgatc gagtccctga ttcattcggg cgaaccgctg ggtctggaag
     2461 ccggttccaa agccgagttg atggcagtgc tggcacatgc tggcatgact cgtagcgtca
     2521 tcgtctgcaa cggttataaa gaccgcgaat atatccgcct ggcattaatt ggcgagaaga
     2581 tggggcacaa ggtctatctg gtcattgaga agatgtcaga aatcgccatt gtgctggatg
     2641 aagcagaacg tctgaatgtc gttcctcgtc tgggcgtgcg tgcacgtctg gcttcgcagg
     2701 gctcgggtaa atggcagtcc tccggcgggg aaaaatcgaa gttcggcctg gctgcgactc
     2761 aggtactgca actggttgaa accctgcgtg aagccgggcg tctcgacagc ctgcaactac
     2821 tgcacttcca cctcggttcg cagatggcga atattcgcga tatcgcgaca ggcgttcgtg
     2881 aatccgcgcg tttctatgtg gaactgcaca agctgggcgt caatattcag tgcttcgacg
     2941 tcggcggcgg tctgggcgtg gactatgaag gcacccgttc gcagtctgac tgctccgtaa
     3001 actatggcct caatgaatac gccaacaaca tcatctgggc gattggcgat gcgtgtgaag
     3061 aaaatggtct gccgcatccg acggtaatca ccgaatcggg ccgtgcggtg actgcgcacc
     3121 ataccgtgct ggtgtcgaat atcatcggcg tggaacgtaa cgaatatacg gtgccgaccg
     3181 cgcccgcaga agatgcgccg cgcgcgctgc aaagcatgtg ggaaacctgg caggaaatgc
     3241 acgaaccggg aactcgccgt tctttgcgtg aatggttaca cgacagccag atggatctgc
     3301 acgacattca tatcggctac tcttccggca cctttagcct gcaagaacgt gcatgggcag
     3361 aacaactcta tctgagcatg tgccatgaag tgcagaagca actggatccg caaaaccgtg
     3421 ctcatcgtcc gattatcgac gagctgcagg aacgtatggc agacaaaatg tacgtcaact
     3481 tctcgctgtt ccagtcgatg ccggatgcgt gggggatcga ccagttgttc ccggttctgc
     3541 cgctggaagg gttggatcaa gtgccggaac gtcgcgcagt gctgctggat attacctgtg
     3601 actctgacgg tgctatcgac cactatattg atggtgatgg tattgccacg acaatgccaa
     3661 tgccggagta cgatccagag aatccgccga tgctcggttt ctttatggtc ggcgcatatc
     3721 aggagatcct tggcaatatg cacaacctgt tcggtgatac cgaagcggtt gacgtgttcg
     3781 tgttccctga cggtagcgta gaagtagaac tgtctgacga aggcgatacc gtggcggaca
     3841 tgctgcaata tgtacagctc gatccgaaaa cgctgttaac ccagttccgc gatcaagtga
     3901 agaaaaccga tcttgatgct gaactgcaac aacagttcct tgaagagttc gaggcaggtt
     3961 tgtacggtta tacttatctt gaagatgaat aattaagatt attccgctgg cgggtcgatt
     4021 tatttacgta aatcggcccg ctttcttttt atatattctt aaaaataatc tagctgcttt
     4081 tcttattaaa taatctccct acaatcgctg cattaattaa atgcagaggg aacggttatg
     4141 aaaaaatgga aagtacgtag cgcgttggtg gcattaatcg tgctgctggc tggttgttcc
     4201 agtaatgcgc agtataatag cagtgcatcg ggcaatgtcg gcaccgcctg gggtggggat
     4261 gtgcactcaa cggttcaggg cgtatctgct gagcgagcct ggcgcgatcc ggcggagatg
     4321 atcgttatta gttattcgac taatgttcct tccggctacg accgcgttta tagcattcgt
     4381 attagcgaac tggaatatgc tattcgcgat ggtaatttta attctctacc tattacgcgt
     4441 gtttatgatt catccaataa tgaaccacgc tatattgtcc atgccagagt cggaatgaat
     4501 tatcaattat atgtccgtaa ttacagttgt aacaccaact acgagatcgt tgctacggtt
     4561 gatggcctgg atgtgctgaa cggcaagcaa ggttcgctga ataacaacgg ctatattgtg
     4621 aatgccggag attctttagc gattaaagga ttccgcaaag ataaacatac cgaagcagct
     4681 tttcagttcg ctaacgttgc tgattcctac gcagccaatt cggcgcaagg cgatgtgcgt
     4741 aataccggtg taatcggctt tgccgccttt gaattacagg gccaggcgca aaacgcgctg
     4801 ccgccgtgct ctggacaagc ttttccggca gataacaatg gctatgcgcc gccaccgtgt
     4861 cggaaatagc aacctcgctt gatgcctcgc ccatttaagg cgataattag cacaaacttg
     4921 tgtttcgcaa atccaaccct tcctcgtcgg gcctaacgac gcggaagggt tttttatatc
     4981 gactttgtaa taggagtcca tccatgagca ccttaggtca tcaatacgat aactcactgg
     5041 tttccaacgc ctttggtttt ttacgcctgc cgatgaactt ccagccgtat gacagcgatg
     5101 ctgactgggt gattactggt gtgccgttcg atatggccac ttctggtcgt gcggggggac
     5161 gccacggtcc ggcagcgatc cgtcaggttt cgacgaatct tgcctgggaa cacaatcgct
     5221 tcccgtggaa tttcgacatg cgtgagcgcc tgaacgtcgt ggactgcggc gatctggtat
     5281 atgcctttgg cgatgcccgt gagatgagcg aaaagctgca ggcgcacgcc gagaagctgc
     5341 tggctgccgg taagcgtatg ctctccttcg gtggtgacca ctttgttacg ctgccgctgc
     5401 tgcgtgctca tgcgaagcat ttcggcaaaa tggcgctggt acactttgac gcccacaccg
     5461 atacctatgc gaacggttgt gaatttgacc acggcactat gttctatacc gcgccgaaag
     5521 aaggtctgat cgacccgaat cattccgtgc agattggtat tcgtaccgag tttgataaag
     5581 acaacggctt taccgtgctg gacgcctgcc aggtgaacga tcgcagcgtg gatgacgtta
     5641 tcgcccaggt gaaacagatt gtgggtgata tgccggttta cctgaccttt gatatcgact
     5701 gcctggatcc tgcttttgca ccaggcaccg gtacgccagt gattggcggc ctgacctccg
     5761 atcgcgctat taaactggta cgcggcctga aagatctcaa catcgttggg atggacgtag
     5821 tggaagtggc tccggcatac gatcagtcgg aaattaccgc tctggctgct gcgacgctgg
     5881 cgctggagat gctgtatatt caggcggcga aaaagggcga gtaagcacca gatgcgatgc
     5941 gcacgggtaa aacgtgccat taatgtcgga tgcggcgtga acgccttatc cgacctacgt
     6001 tcggcacccg taggccggat aagatgcagt cagcatcgca tccggcaatg cgcacagggt
     6061 aacaaatgtg ccattgatgt cagatgcggc gtaaacgcct tatctgacct acgttcgaca
     6121 ccacaaggct ttacttaatc ccatccgcgc tcatgcgatc gcgaatatgc tgggcgcgtt
     6181 cggcggatgc tggatggtcg tcaaacattg agctttgacg gccttcttcc agcttcgcca
     6241 gtttttcaaa gctggtggca agacctgccg ggctgatgcc gcgttggcgc agaagatcgt
     6301 aagaataatc atcggcttct gcttcctggc gctgggagaa ttgcgaatta actaatttct
     6361 cgcccagatc accgagttgt gattgagata aactgccgac aattccaccc gccgatgccg
     6421 ccgctactcg cactgcgtta gtgcccagtg ctacctgcat ccctttcttc acatggccta
     6481 acgctacatg ccccatttcg tgaccgatca ccgcttcgac ttcgttatcc gtcatcatat
     6541 ccattagccc gctatagaca cggatacagc cgttagccat tgcaaaggcg ttcacatcct
     6601 tcgccatata cactttgtaa tttaccggct ggccgttgat attgttgcct agcgcattgg
     6661 caatagttgt cagacgttta gcgtattcgc tattggctgg cgcaatcgtc gccttgctgt
     6721 ccatctcctg acatgcctga tcgctcaggg ctttcacctg cgcatcactc aaactgtaag
     6781 cctgaaaagc ttccgctcct gatgagagca gtccgttgga gtccatattc tggcaaccgg
     6841 tcagtaccgt tgccacgctc attgctacca ataaggcgcg aattttcatg ttttctcttc
     6901 cgcacaaggt caggattatt ctaaaaatgc gccgtttgca ggtgaatcga cgctcagtct
     6961 cagtataagg aaaagcgcag cggacgggcg agaagattgc gcaacatgcg agcatgatcc
     7021 agagatttct gaagcggcaa aaggatgttc catgtacatg acgcgcggct tgcggtaaat
     7081 tgttggcaaa ttttccggcg tagcccaaaa cgcgctgtcg tcaagtcgtt acgggcgtgc
     7141 ccttcatcat ccgatctgga gtcaaaatgt cctcacgtaa agagcttgcc aatgctattc
     7201 gtgcgctgag catggacgca gtacagaaag ccaaatccgg tcacccgggg gcccctatgg
     7261 gtatggctga cattgccgaa gtcctgtggc gtgatttcct gaaacacaac ccgcagaatc
     7321 cgtcctgggc tgaccgtgac cgcttcgtgc tgtccaacgg ccacggctcc atgctgatct
     7381 acagcctgct gcacctcacc ggttacgatc tgccgatgga agaactgaaa aacttccgtc
     7441 agctgcactc taaaactccg ggccacccgg aagtgggtta caccgctggt gtggaaacca
     7501 ccaccggtcc gctggggcag ggtattgcca acgcagtcgg tatggcgatt gcagaaaaaa
     7561 cgctggcggc gcagtttaac cgtccgggcc acgacattgt cgaccactac acctacgcct
     7621 tcatgggcga cggctgcatg atggaaggca tctcccacga agtttgctct ctggcgggta
     7681 cgctgaagct gggtaaactg attgcattct acgatgacaa cggtatttct atcgatggtc
     7741 acgttgaagg ctggttcacc gacgacaccg caatgcgttt cgaagcttac ggctggcacg
     7801 ttattcgcga catcgacggt catgacgcgg catccatcaa acgcgcagta gaagaagcgc
     7861 gcgcagtgac tgacaaaccg tccctgctta tgtgcaaaac catcatcggt ttcggttccc
     7921 cgaacaaagc cggtacccac gactcccacg gtgcgccgct gggcgacgct gaaattgccc
     7981 tgacccgcga acagttgggc tggaaatacg cgccgttcga aatcccgtct gaaatctatg
     8041 ctcagtggga tgcgaaagaa gcaggccagg cgaaagaatc cgcatggaac gagaaattcg
     8101 ctgcttacgc gaaagcttat ccgcaggaag ccgctgaatt tacccgccgt atgaaaggcg
     8161 aaatgccgtc tgacttcgac gcgaaagcaa aagagttcat tgctaaactg caggctaacc
     8221 cggcgaaaat cgccagccgt aaagcgtctc agaatgctat cgaagctttc ggtccgctgt
     8281 tgccggaatt cctcggcggt tctgctgacc tggcaccgtc taacctgacc ctgtggtctg
     8341 gttctaaagc aatcaacgaa gatgctgcgg gtaactacat ccactacggt gttcgcgagt
     8401 tcggtatgac cgcgattgct aacggtatct ccctgcacgg tggtttcctg ccgtacacct
     8461 ccaccttcct gatgttcgtg gaatacgcac gtaacgccgt acgtatggct gcgctgatga
     8521 aacagcgtca ggtgatggtt tacacccacg actccatcgg tctgggcgaa gatggcccga
     8581 ctcaccagcc ggtagagcag gtcgcttctc tgcgcgtaac cccgaacatg tctacatggc
     8641 gtccgtgtga ccaggttgaa tccgcggtcg cgtggaaata cggtgttgag cgtcaggacg
     8701 gcccgaccgc gcttatcctc tcccgtcaga acctggcgca gcaggaacgt actgaagagc
     8761 agctggcaaa catcgcgcgc ggtggttatg tgctgaaaga ctgtgctggt cagccggaac
     8821 tgattttcat cgcgaccggt tctgaagttg aactggcggt tgctgcctac gaaaaactga
     8881 ctgccgaagg cgtgaaagcg cgcgtggttt ccatgccgtc tactgacgca ttcgacaagc
     8941 aggatgcggc ttaccgtgaa tccgtactgc cgaaagcggt tactgcacgc gttgcggtcg
     9001 aagcgggtat tgctgactac tggtacaagt atgttggcct caatggcgct atcgtcggca
     9061 tgaccacctt cggtgagtca gctccggcag agctgctgtt tgaagagttc ggcttcaccg
     9121 tggataacgt tgttgcgaaa gcaaaagaac tgctgtaatt agcatttcgg gtaaaaaggt
     9181 cgcttcggcg acctttttta ttgccttgat atgtccgttt gcggacaggc aataggtaaa
     9241 tagtgatgtg tatcgcaaat atttatatga aataaatatt aactatgcaa tgcatatcac
     9301 aatatgcatg ttgacattta tttttatatc cataaataac tgttatttat ggaattaata
     9361 attcattgtt tttaaagcat cgatttcctc gctggattgc tttcattaaa ccgcacgagt
     9421 attttatttt taccgccgga cggtacccta aaaataaaat aaggataatt tatgcggctt
     9481 agtgattatt ttccagaatc atcaatctca gttatacatt cagcaaaaga ttggcaggaa
     9541 gctatcgatt tctcgatggc atcattgctg gataaaaact atatcagaga gaattacatt
     9601 caggcaatta aagattccac cattaacaat ggcccttatt atattctcgc accaggcgtg
     9661 gcaatgcctc atgcgcgacc ggaatgtggg gcgcttacaa ccgggatgtc tttgacgtta
     9721 cttaaacaag gcgtttattt tccggggaat gacgaaccga ttaaattact catcgggctt
     9781 tctgctgccg atgccgattc gcacattggc gctattcagg cgttaagtga attgctgtgc
     9841 gaagaagaaa tactcgaaca actcttaaca gcatcatcag aaaaacaatt atcggacatt
     9901 atcagccgcg gataattact ctctcctcta caggataata ttatggaaaa caagtctgct
     9961 cgtgcaaagg tccaggcttt tgggggattt ttgacggcaa tggtcatccc caatataggt
    10021 gcttttgttg cctggggctt cataactgcg ttatttattc ccaccggttg gctgccgaat
    10081 gaacatttcg ccaaaattgt cggcccgatg attacctatt tattgcccgt gatgattggt
    10141 tctacaggtg gtcatctggt cggcggtaaa cgcggggcgg tcatgggcgg aataggtact
    10201 attggtgtga tcgttggcgc agagatcccg atattccttg gctcaatgat catgggaccg
    10261 ttaggtgggc tggtcataaa atatgtcgat aaggcactgg aaaaacgcat acctgccggt
    10321 tttgagatgg ttatcaataa cttctcatta ggtatcgcgg ggatgctcct ttgtctgctg
    10381 ggttttgaag ttatcggccc agcggtgtta attgccaata ctttcgtcaa agagtgtatt
    10441 gaggcgctgg tacatgcggg ttatctgcct ctgctgtcag tcatcaatga accggcgaaa
    10501 gtgcttttcc tcaataatgc gatcgatcag ggcgtctatt atccgctggg aatgcaacag
    10561 gcttcggtta acggtaaatc catcttcttt atggtggcgt ccaatcctgg gcctggctta
    10621 gggctgctgc tggcgtttac cttgtttggt aatttgctta cctggcactg acgccgaaag
    10681 gctcgttcct ggcgacaatt gccggtgtta cggtaggtac cctggtgtcc tttgctatca
    10741 cttccgtaat actgaagatg gaaaaaacgg tggaaacgga gagcgaagat gagtttgctc
    10801 agtcagccaa tgcggttaag gcgatgaaac aagaaggtgc attctcgtta agcagggtta
    10861 agcgtatcgc ctttgtttgc gatgcgggga tgggctccag tgcgatgggc gcgaccacct
    10921 tccgcaaacg cctggaaaaa gcggggctgg caattgaagt aaaacattac gcgatagaaa
    10981 acgtgcctgc ggatgccgat atcgtcgtca ctcacgccag tctggaaggg cgcgtgaaac
    11041 gtgtgacgga taaaccgctg atattgatta ataactatat tggcgatcca aaactcgaca
    11101 ctttatttaa tcaattaacc gccgaacata aacactgatt acagaggtaa aaatgaaaac
    11161 caaagttgct gctatttatg gcaagcggga tgtccgtctg cgcgaatttg aactgccaga
    11221 aattaccgat aatgaactgt tagtgagtgt aatttctgac agcgtctgtt tatcgacctg
    11281 gaaagcggcg ttactcggta gtgaacataa acgcgtaccc gacgatttag aaaatcatcc
    11341 ggtcattacc gggcatgaat gtgccggggt tattgtcgaa gtgggtaaaa atctcactgg
    11401 caaatataaa aaaggccagc gttttgtatt gcaaccggcg atggggttac caagcggata
    11461 ttcagcgggc tacagctacg aatattttgg cggtaacgcc acctatatga ttattcccga
    11521 aatcgccatt aatttgggct gcgtattacc gtatcacggc tcttattttg ctgcggcgtc
    11581 gctggcagag cctatgtgct gcattattgg cgcttatcat gccaattatc acaccacgca
    11641 atatgtttat gagcatcgca tgggcgtcaa acctggcggc aatattgcac tgctggcgtg
    11701 tgcaggtccg atgggcattg gcgctatcga ttacgccatt aacggtggca tacaaccgtc
    11761 acgggtggtg gtggtcgata tcgacgacaa acgcctggcg caggtgcaga agctgctgcc
    11821 ggtggagctg gcggccagta aaggcattga gctggtgtat gtgaatacca aagggatgag
    11881 cgatcctgtc cagatgctgc gggcgctgac aggagatgtc gggttcgatg acatttttgt
    11941 ttatgcggcg gtgcctgctg tcgttgagat ggctgacgaa ttactggcgg aagatggctg
    12001 tctgaacttc tttgccggtc cgacggataa aaacttcaaa gtgccgttta atttctacaa
    12061 cgtccattac aacagcacgc acgtagtcgg tacatccggc ggttcaacgg acgacatgaa
    12121 agaggcgatt gcccttagcg ccacaggaca gttacagccg tcgtttatgg tgacccatat
    12181 tggtggcctg gatgcggtgc cagaaaccgt gctcaatctg ccggatatcc ctggcggtaa
    12241 aaaactcatt tataacggcg tgaccatgcc gctcactgcc attgccgatt ttgccgaaaa
    12301 aggcaaaacc gatccgctgt ttaaagagtt ggcgcggctg gttgaggaaa cgcacggcat
    12361 ctggaatgaa caggccgaga aatatctgct ggcacaattt ggcgttgata tcggggaggc
    12421 cgcgcaatga tgtccctggc gtggccatta tttcgcgtta cggaacaggc agcgttgact
    12481 gcctggccgc aaaccggatg tggcgacaaa aataaaattg atggcctggc ggtcaccgcg
    12541 atgcgctagg cattaaacga cgtcgctttt cgtggacgag tggttatcgg cgaaggagaa
    12601 attgaccatg cgccgatgct gtggattggc gaagaggtgg gcaaaggcga tgggccggaa
    12661 gtcgatatcg cggttgaccc gctcgaaggc acgcgaatgg tggcgatggg gcagagcaat
    12721 gcgctggcag tcatggcttt cgcccctcgg gatagcctgt tacatgcgcc cgatatgtat
    12781 atgaaaaagc tggttgttaa tcgacttgcg gctggcgcga ttaatctgtc tttgcctctg
    12841 gcggacaact tgcgtaacgt ggcgcgggcg ttaggtaaac cgctggacaa gctgcgcatg
    12901 gttacgctgg ataaaccgcg cctgagtgcc gcgattgagg aagcaacaca gctgggcgtg
    12961 aaggtttttg ccctgccgga tggcgatgtc gccgccagcg tgctgacctg ctggcaggat
    13021 aatccttacg atgtgatgta caccatcggc ggtgcgccag aaggcgtgat ttctgcctgt
    13081 gccgttaaag cattaggcgg ggatatgcag gccgagctga ttgacttttg tcaggctaaa
    13141 ggggattaca cggaaaatcg gcagattgca gagcaggagc gcaagcgttg caaggcaatg
    13201 ggcgttgacg ttaaccgtgt gtactcgctc gatgaactgg tgagggggaa cgatatcctc
    13261 tttagcgcta caggcgtgac gggcggtgag ctggtgaacg gtatccaaca gacggcgaat
    13321 ggggtgcgga cgcagacatt actgatcggc ggcgcggacc aaacgtgtaa tataatagat
    13381 tccctgcatt gatggtgatc tatcggaaga ccaatggcga cgctgacaga agatgatgtg
    13441 cttgagcaac tggatgcaca ggacaattta ttttcattta tgaaaactgc gcattctatt
    13501 ttgctccagg ggatacgcca gtttctgccg tcgctgtttg tcgataacga tgaagagatc
    13561 gtggaatatg cagtgaagcc gttactcgcc caaagcggcc cgcttgacga tattgatgtt
    13621 gcactgtgtt tgatttatgc gttggggaaa atggataaat ggctgtacgc cgatatcatg
    13681 catttttccc agttctggca ttacctgaac gaacaggatg aaacccccgg atttgccgat
    13741 gacattacct aggattttat cagcaatgtc aacagtataa ctcgcaatgc gacgctctac
    13801 gatgcgttaa aagcgatgaa gttcgccgat ttcgccatct ggtcagaggc gcgttttagc
    13861 gggatggtca aaacggcgct gacgctggca gtaacgacaa ctttaaagga attaacgccg
    13921 tgaaaatcga actgacggtg aatggactaa aggtacaggc tcagtactct gatgatgaaa
    13981 ttgagaatgt tcataaaccg ctactgcgta tgctggcggc catacaggcg gtaagtccgc
    14041 agcgacgtac ggtggttttt ctttgcgctc cgccggggac gggtaaatct accttaacta
    14101 ccttctggga atatctcgcg caacaagacc cggaactgcc cgctattcag acgctcccga
    14161 tggatggttt tcaccattac aatagctggc tggatgcgca tcaattgcgc cccttcaaag
    14221 gcgcaccaga gacatttgac gttgcgaaac tggctgaaaa tctgcgccag gtcgtggaag
    14281 gggattgtac gtggccgcag tacgatcgac aaaagcatga tcctgttgaa gatgcgttgc
    14341 acgttaccgc accactcgtc atcgtcgaag gaaactggtt gttgctggac gacgagaagt
    14401 ggtgccagct tgcgcaattt tgtgatttct cgatctttat caacgcgcca gctactgcgt
    14461 tgcgggagcg tctggtgggg cgcaagctgg cgggaggggt atcgctggca gacgcagaag
    14521 ctttttatga ccgtaccgac gggccgaatg ttcgccgggt gctggaagag agtctgcctg
    14581 caaatttgac cttaatgatg accgctacgg gtgaatatcg tctggtggat taacgttcct
    14641 gattagacca tcttccagtc gtaccacacg agagaaatga cgccgggtaa atgcggcgtc
    14701 atgactgatt gctacgacgc ttgtgcctcg ctggccgcac ttctccagcc agctttcaaa
    14761 cacgctcaac caattttcgt caaaatcccg actcggctcg tccagcagca atagtggcgg
    14821 agaaagtgct tccaggcagg cgacggcgac catccgtcgc tgcgcactat gcagatccaa
    14881 cgggtgcgcg ttggcagtgt ctgctaactg acaacattgc agggcagcat gggtacgttg
    14941 agtgatttca tccgccgggc atttttgcag tttcaaacca aatgcgatct cgtcagcgac
    15001 ggtgctgtga aaaagttggt tttccgcttc ctgaaacagt acgccaatct ttgccgcgcg
    15061 ctggaggttt ttcaggtttt tcatcgcctg ttgttgcagc ataaccgtac cggctgtggg
    15121 cgtaagaaga cctgccatta ctcgtaacag cgtcgatttc cctgcgccat tgtcaccggt
    15181 cagcgccaac cattcacctt gtttgagttg cagagaaatg tcgcaaagac aatccgttgc
    15241 cgcgccaggc cagcgataag atatctgatt taacgttaac atagtggctg gagcgctccg
    15301 ttttgcaatt gccaggcttg ctggcaagta gttcaggaaa ggtgtgcgat gacgttcaaa
    15361 aagaataatc agcgaaccac gttcaaacgc ccagtgttgt aagcgctgca acagcatttc
    15421 gctggcctgc ggcgtcaggc ggctaaaggc ttcatcaaga attaatagct ttggctgcat
    15481 cgcgatggcg caggcgatga ccacgcgctg tgtctctcca acggagagtg ttgccgggtg
    15541 acgatggcgc aacggctggc actcggtcag agtcagggcg gcatcaatcc gcgccataat
    15601 ctctgcttca gcaagacaca gattttctgg cccaaaggca acttcttctt ccacgctaaa
    15661 ggtacagccg gagagctgca aatagggcta ttgctggacg agctggatgg tggcggattg
    15721 ttcattaagc gggagatgcc caatgggcgt accgaggagc gtccccgagc ctgttatctc
    15781 tcctggcaga aagtccggat accagcccgc catcagctgt gccagcgtac ttttgccact
    15841 gccgttgtca ccaaagatgg cgaccatccc cggtttgaca tagtgaaagt cataacagaa
    15901 cggaggatgc gttgagtgtg tcgggcaata acggaactgt tctaacgtaa ccatatccac
    15961 gctccgaatt ctgtcagcat cagcaagatc atggtgtaac gcgctacgcg ttgtagggtg
    16021 ctatcggctg gtgcccacaa cgttgttcgt cggttgtgga tccgaaatgc ccacatatcc
    16081 agcgccgcac cacggacagc aagatcgttt agcgcattgt gtgttagcgg aataattaac
    16141 gcgggcatcg cacgtaaacg ctgataccag ccctcatcca gcggcacgcc gcgggcacgc
    16201 tgcgcttcat gaataatcgc taattgccgt tttaactgct caacgaccaa taacggcccg
    16261 gcaaacagat aagcgacgcc tggcggcagg cgagaagcaa acagagcgcg aataaaacat
    16321 tgcacgggga cgtactgcat ccacaactgt gaggttgaaa caatcgccag aatccgtaac
    16381 cagagcgtaa tagcatgcgt ccaacgctcc ggcgaacgcg gcgtgccgct tagccattct
    16441 gttagccagc caccgtgtac cagccacagc ccggctccca gcgagaacat cagccagacg
    16501 acatattttg cccgccgccg cgtggccttt agcgcaataa ggcaaaaaaa ggtcgccgcg
    16561 ctatagatcg gcaaaatggt ctgcgcgggc aggataagcg tggtgcaggc cgccaatgcc
    16621 catagtgtta atgaggtaaa tggatgcatt tagcgcacgg cagccattgc cggaaaatgg
    16681 cgcgtggtgc gaatcggcag ctggcgcagt aaaagccaga caatcaccgc tgtaagagtt
    16741 ttatcgacca ggttcgcgcc tatcaccgta atcgccaccg actccaccag gttttgtccc
    16801 atcgagtgca tccaggcaac gaacaaatcg gctccgctac cggtgacacc gccgaacagc
    16861 gcagtacgca gcggtacagc gacgaccgtt accgcaagcg taataatcac gccgctgaca
    16921 acgacttttg gtagggtgcg aaaccaaccc gctcgcgcca gccaaccggc gaccaggccg
    16981 atgaccatcg cgacgggtgc aaatgcggcg gcgatcgggt cggtcagcaa tccccagagt
    17041 aaattggtca gtaagccggt cagcattccg atcaccggac caagcagtac cgcgctaata
    17101 agtgtgccga tggagtcgag aaatataggt aatttgacca tgctggccag ttgcccgccg
    17161 atcatattga tggcgataga tataacgatt aacaccagca cctgactgga aaagtgacga
    17221 cgcgccataa gaaaacctct ccgaaagtag ttatttaacg ggggaaatat gcaactcgtc
    17281 gtaaccagaa agcgcgcaag gttggcggct aaacgccagt tcctcaaggc agccgatcat
    17341 cagttcaagc gtggtccgca cggtacagcc gggcatcata tgaccgccaa gcatcgtgcc
    17401 gtgtggatcg gaaacgcaga gatgaagatg ctcaccactc tgttccaacg tgccgtttag
    17461 tgagatcact tcgaatgtac cgttcaggag cgtggtgcct tcttgcccgg catagcgcaa
    17521 ggcgatgtca gtcaggctac cagtactgcc tgcaatccag gcggcatgaa gttgctgctg
    17581 ctgtgcaaaa gcgtgtagct gggaaaaaac ttcctgcccg gggaggaggc gcagtgcgta
    17641 aaagcgtgcg ggggaagaat atgggtaggg caatgtcatc attggagtac tccgaaactc
    17701 ggacgtattg cggataatat cgacgctgca tcagtcatat tctgatataa gtcagggttt
    17761 gtgacggcac aacgaaaaga ttttgctacg cttattcgtg attctgcaaa gtggaataaa
    17821 ttccacaggg gcggggctga aaacgtgacg taagtcagat aattgttttc tttgactgga
    17881 caatcattcc ttttattcca cgtttcgctt atcctagctg aagcgtttca gtcgattaaa
    17941 tgttcgacaa ttaaccaatc agtcgcagtt tgcgacaggt aaggtttccc cggacgattt
    18001 gctggattac tctgtctggc aaatttgctc agggaaaacc ttgcaggaga tctatgaccg
    18061 tacgcgtagc gataaatggc ttcggtcgca tcgggcgtaa tgtggttcgt gctttgtatg
    18121 aatccggacg ccggacggaa attaccgtgg tggcaatcaa cgaactggcg gatgctgcgg
    18181 gcatggcgca tttgttgaaa tatgacacca gccatggccg ttttgcatgg gaagtacgac
    18241 aggaacgcga tcaacttttt gttggtgatg acgccatccg cgtattgcat gaacgttcac
    18301 tgcaatcgct cccctggcgt gaacttggcg ttgatgtagt cctcgactgc accggcgtat
    18361 atggctcccg cgagcatggc gaagcgcata ttgccgccgg ggccaaaaaa gtgctctttt
    18421 cacatcctgg cagtaacgat ctcgacgcga ccgttgttta cggcgtcaat caggatcaac
    18481 ttcgtgcgga acaccgcatc gtttctaacg cttcctgtac cacgaattgc ataattcccg
    18541 tcatcaaatt gttagatgat gcgtacggta ttgagtctgg cactgtgacc acaattcact
    18601 ccgccatgca cgatcaacag gttattgatg cataccatcc tgacctgcgt cgcacccggg
    18661 cagccagcca gtcgatcatt ccggtcgata ctaaactggc cgccggtatc acacgatttt
    18721 ttccgcaatt taacgatcgc tttgaagcga ttgcggtacg tgtgccaacc ataaatgtga
    18781 cggcaatcga tttaagcgtg acggtgaaga aacctgtaaa agccaatgaa gtcaacctgt
    18841 tgctgcaaaa agcagcacaa ggtgcatttc atggtatagt tgactatacg gaattgccgt
    18901 tggtctctgt agattttaac cacgatccgc acagtgccat tgtcgatggc acccaaaccc
    18961 gggtcagtgg cgcacacctg atcaaaacgt tggtctggtg cgataacgaa tggggctttg
    19021 ctaaccgaat gctcgacacg acgttagcta tggctactgt tgctttcagg taagacgcaa
    19081 gcagcgtctg caaaactttt agaatcaacg agaggattta ccatgtctgt aattaagatg
    19141 accgatctgg atcttgctgg gaaacgtgta tttatccgtg cggatctgaa cgtaccagta
    19201 aaagacggga aagtaaccag cgacgcgcgt atccgtgctt ctctgccgac catcgaactg
    19261 gccctgaaac aaggcgcgaa agtgatggta acttcccacc tgggtcgtcc taccgaaggc
    19321 gagtacaacg aagaattctc tctgctgccg gttgttaact acctgaaaga caaactgtct
    19381 aacccggttc gtctggttaa agattacctc gacggcgttg acgttgctga aggtgaactg
    19441 gttgttctgg aaaacgttcg cttcaacaaa ggcgagaaga aagacgacga aaccctgtcc
    19501 aaaaaatacg ctgcactgtg tgacgtgttc gtaatggacg cattcggtac tgctcaccgc
    19561 gcgcaggctt ctactcacgg tatcggtaaa ttcgctgatg ttgcgtgcgc aggcccgctg
    19621 ttggcagctg aactggacgc gctgggtaaa gcactgaaag aacctgcgcg cccgatggtg
    19681 gctatcgttg gtggttctaa agtttctacc aaactgaccg ttctggactc cctgtctaaa
    19741 atcgctgacc agctgatcgt aggtggtggt atcgctaaca cctttatcgc ggcacaaggc
    19801 cacgatgtgg gtaaatccct gtacgaagct gacctggttg acgaagcaaa acgtctgctg
    19861 accacctgca acatcccggt tccgtctgat gttcgcgtag caaccgagtt ctctgaaact
    19921 gcaccggcta ccctgaaatc tgttaacgat gtgaaagctg acgagcagat cctggatatc
    19981 ggtgatgctt ccgctcagga actggctgaa atcctgaaga atgcgaaaac cattctgtgg
    20041 aacggtccgg ttggcgtgtt cgaattcccg aacttccgca aaggtactga aatcgtggct
    20101 aacgctatcg cagacagcga agcgttttcc atcgctggcg gcggcgacac tctggcagca
    20161 atcgacctgt tcggcattgc tgacaaaatc tcctacatct ccactggcgg cggcgcattc
    20221 ctcgaattcg tggaaggtaa agtactgcct gcagtagcga tgctcgaaga gcgcgctaag
    20281 aagtaaaaaa tcacagggca gggaaacctg cccttgtttc agcgcgcttt tagagcacgc
    20341 actttttcat actctaaata attcgagttg caggaaggcg acaagagagt gaatccccag
    20401 gagcttacat aagtaagtga ctggggtgag cgaacgcaga cgcagcacat gcaacttgaa
    20461 gtatgacgag tataaggccc gacgatacag gacaagagac atgtctaaga tttttgattt
    20521 cgtaaaacct ggcgtaatca ctggtgatga cgtacagaaa gttttccagg tagcaaaagc
    20581 aaacaacttc gcactgccag cagtaaactg cgtcggtact gactccatca acgccgtact
    20641 ggaaaccgct gctaaagtta aagcgccggt tatcgttcag ttctccaacg gtggtgcttc
    20701 ttttatcgct ggtaaaggcg tgaaatctga cgttccgcag ggtgctgcta tcctgggcgc
    20761 gatctctggt gcgcatcacg ttcaccagat ggctgaacat tatggtgttc cggttatcct
    20821 gcacactgac cactgcgcga agaaactgct gccgtggatc gacggtctgc tggacgcggg
    20881 tgaaaaacac ttcgcagcta ccggtaagcc gctgttctct tctcacatga tcgacctgtc
    20941 tgaagaatct ctgcaagaga acatcgaaat ctgctctaaa tacctggagc gcatgtccaa
    21001 aatcggcatg actctggaaa tcgaactggg ttgcaccggt ggtgaagaag acggcgtgga
    21061 caacagccac atggacgctt ctgcactgta cacccagccg gaagacgttg attacgcata
    21121 caccgaactg agcaaaatca gcccgcgttt caccatcgca gcgtccttcg gtaacgtaca
    21181 cggtgtttac aagccgggta acgtggttct gactccgacc atcctgcgtg attctcagga
    21241 atatgtttcc aagaaacaca acctgccgca caacagcctg aacttcgtat tccacggtgg
    21301 ttccggttct actgctcagg aaatcaaaga ctccgtaagc tacggcgtag taaaaatgaa
    21361 catcgatacc gatacccaat gggcaacctg ggaaggcgtt ctgaactact acaaagcgaa
    21421 cgaagcttat ctgcaggggc agttgggtaa cccgaaaggc gaagatcagc cgaacaagaa
    21481 atactatgat ccgcgcgtat ggctgcgtgc cggtcagact tcgatgatcg ctcgtctgga
    21541 aaaagcattc caggaactga acgcgatcga cgttctgtaa gatattcctt tctgcttatc
    21601 tcaaggcccg ctctgcgggt ctttttttcg ccaaaagcaa aattgcctga tgcgctacgc
    21661 ttatcaggcc tacacgtatc ctgcaatata ttgaatttgc aggtttttgt aggccggata
    21721 aggcgttcac gccgcatccg gcatgacaaa gcgcacattg atatctgtct gagccccgct
    21781 ctgcggggat tttttcgcca aaagcaaggt gattcagatg agaaatctgt gatctatttg
    21841 gcaaaattat gctttattgt ttacccttgt cagactgccc gtcataaggc ggcggagtgt
    21901 atttctccat tttgagtcag ttgaaaagga atattgaatg gaagatttga atgttgtcga
    21961 tagcataaac ggcgcgggaa gctggctggt agctaaccag gcgctgctgc taagttatgc
    22021 agtaaacatc gtggcggcac tcgcgatcat catcgttggt ttgattatcg cgcggatgat
    22081 ttccaacgcg gtgaatcgcc tgatgatctc ccgtaaaatc gatgccaccg ttgctgattt
    22141 tctttctgca ttagtccgtt acggaattat cgcctttacg ctaatcgctg ccctggggcg
    22201 cgtgggggta caaacagcgt cagtcattgc tgtactcggt gccgcaggct tagctgttgg
    22261 tctggctttg caggggtcac tgtctaacct ggccgctggc gtgttacttg tcatgttccg
    22321 cccgttccgt gccggagaat atgttgacct gggcggcgta gccggtactg tgctgagtgt
    22381 gcagattttc tccaccacca tgcgtactgc agacggtaaa attatcgtta ttccgaacgg
    22441 taaaattatt gccggaaata ttattaactt ctcccgcgag ccagttcgcc gtaacgaatt
    22501 tattattggc gtggcgtatg attccgatat tgatcaggtt aagcagatcc tgaccaatat
    22561 tatccagtct gaagatcgca ttttgaaaga tcgcgaaatg actgtgcgtc tgaacgaact
    22621 tggtgcatcg tcgattaatt tcgtggtccg cgtctggagc aacagcggcg atctgcaaaa
    22681 cgtgtactgg gatgtgctgg agcgtattaa acgtgaattt gatgccgccg gtatcagctt
    22741 cccgtacccg caaatggatg tgaactttaa gcgggtgaaa gaagacaaag ctgcgtaacc
    22801 aacgctgagg ccagataata ctctctggcc tctctcttat tagtttttct gattgccaat
    22861 taatattatc aatttccgct aataacaatc ccgcgatata gtctctgcat cagatactta
    22921 attcggaata tccaacgtgt tttcttatta ctttcaaggt cttgcgcttg gcgcagctat
    22981 gatcctaccg ctcggtccac aaaatgcttt tgtgatgaat cagggcattc gtcgtcagta
    23041 ccacattatg attgccttac tttgtgctat cagcgatttg gtcctgattt gcgccgggat
    23101 ttttggtggc agcgcgttat tgatgcagtc gccgtggttg ctggcgctgg tcacctgggg
    23161 cggcgtagcc ttcttgctgt ggtatggttt tggcgctttt aaaacagcga tgagtagtaa
    23221 tattgagtta gctagtgccg aagtcctgaa gcaaggcaga tggaaaatta tcgccaccat
    23281 gctggcagtg acctggctga atccgcatgt ttacctggat acttttgttg tactgggcag
    23341 ccttggcggg cagcttgacg ttgaaccaaa acgttggttt gcgctcggga caattagcgc
    23401 ctctttcctg tggttctttg gtctggctat tctcgcagcc tggctggcac cgcgcctgcg
    23461 cacggcaaaa tcacagcgca ttatcaatct ggtagtggga tgtgtcatgt ggtttatagc
    23521 cttgcagctg gcgagagacg gtattgctca tgcacaagcc ttgttcagtt aggcgctatc
    23581 tgatggaaaa ataaaacaga ggcgctaagc ttgcctccag aggtcctgaa ttttgggcaa
    23641 gtcaattaac acggagagac taacgtgaag ttcaaagtta tcgccctggc ggcattaatg
    23701 ggtattagcg ggatggcagc gcaggctaac gaattgccgg atggaccgca tattgtcacc
    23761 tccggtacgg caagcgtgga tgcggtgcca gacattgcca ctcttgcgat tgaagtcaac
    23821 gtggccgcga aggatgccgc tactgccaag aaacaggcag atgagcgcgt cgcacaatac
    23881 atttccttcc ttgaactcaa tcagatcgcg aaaaaagata tcagctcagc gaacttacgc
    23941 acccagccag attatgatta tcaggatggt aaaagtatcc tgaaaggcta ccgcgctgtg
    24001 agaacggtgg aagtcacgct ccgtcagtta gacaaactga attccttgct ggatggcgcg
    24061 ctgaaggcgg gtcttaacga aattcgttct gtgtcgctgg gcgtggcgca gccggatgcc
    24121 tataaagaca aagcgcgtaa ggcagcgatt gataacgcga ttcatcaggc gcaggaactg
    24181 gcgaacggct ttcatcgtaa actggggccg gtatatagcg tgcgctacca tgtttccaac
    24241 tatcagccca gcccaatggt gcggatgatg aaagccgatg ccgcgccggt gtccgcccag
    24301 gaaacttacg agcaggccgc tattcagttt gatgatcagg tcgatgtggt cttccagtta
    24361 gaacctgtgg atcaacaacc cgctaaaaca cctgcagcac aataatactt gtagcccgac
    24421 gtattcgtcg ggctaatgcc tttacccgat attgcctcct ttttctgtaa ttttctgtaa
    24481 aaccatgacg taatcaccta tctttgctcg cggtttcatc aaggataggc tgactgaaac
    24541 ggttaagcgg acaaggatgc gggggagggg gatggacatt tttatttcga aaaagatgcg
    24601 caatttcatt ttattagcgc aaaccaataa tattgcccgg gcggcagaaa aaatccatat
    24661 gacggcttcg ccatttggta aaagcattgc cgcgctggaa gaacaaattg gctatacgct
    24721 atttacccgc aaagataata atatcagcct caataaagcc ggacaggaac tgtatcaaaa
    24781 actgttcccg gtttatcaac ggctttctgc gattgataat gaaatccata actcaggacg
    24841 tcgttcacga gaaattgtga taggcataga taatacttat ccgacaatta tttttgatca
    24901 gttgattagt ctcggagata agtacgaagg cgtgaccgcc cagccagttg agttcagcga
    24961 aaacggcgtt atcgataatc tttttgaccg tcagttagat tttataatct cccaacagca
    25021 tgtatctgca cgagttcagg aactggaaaa cctgactatc agtgaactac caccgctgcg
    25081 attaggcttt ctcgtttctc gccgttatga agagcggcaa gagcaagagc tgcttcagga
    25141 gctgccctgg ctacaaatgc gctttcagaa ccgggctaac ttcgaagcaa tgattgatgc
    25201 gaatatgcgt ccttgtggga tcaatcccac cattatttat cgtccctaca gttttatggc
    25261 caaaatcagc gccgtggagc gcggacattt tctgacggtg atcccgcatt ttgcttggcg
    25321 actggtgaat ccggcaacgc tgaaatattt tgatgctccg cacaagccga tgtatatgca
    25381 ggaatatctt tattcaatca gaaatcatcg ttataccgcc acgatgcttc agcatattgc
    25441 tgaagatcgt gacgggacaa accattaacc cagcatcgag ccggttgcaa ttaaattacg
    25501 gtgtaagtcg aagacgtggc taagatcgtg gtgaatatgt ccgccgggcg cattttccag
    25561 atagcgatgc agataatccc gatacatggg atgtgcacaa ttatcaatga tagtgcgggc
    25621 gcgttgaagc ggggaaagac cacgcagatc ggcgatccct tgttcggtga tgatcacttt
    25681 gacgctgtgt tcgctgtgat caacatggct gcacattggc acgacggttg agatcttgcc
    25741 ttctttagca atcgacgggg ccataaagat cgacagatat gcgttgcgtt caaaatcacc
    25801 gctgccgccg atgccgttca tcagatcgac cccggctacg tgcgttgagt tggcatgccc
    25861 gtaaatatca aactccaggc cgacgttcag agcgatgacg cccagacgac ggatgatttc
    25921 cgggttattg gaaatctcct gcggacgcaa cacaatgcgg ctggcaaagt aatccatatt
    25981 gtcgtaaatc ttgcgcaggg aatcggccga gattgtcagg ctggaggcgc ttgccccgct
    26041 gattttgccg atttccagta aatgcaccac cgactcctgt agcacttccg aatacatcat
    26101 aaacggagga atttccggat tttcccccag acgcgccatt accgcattat tgatattgcc
    26161 cacgccactt tgcagcggca gaaattccgg cggaatacgc ccatgcgcca tttcctgcaa
    26221 caagaacgtg accacgttat cggcaatctg ctggcacatg ggattttgct tatccagcat
    26281 attaccggcg tcaggcaagt tggtttccac gacggcgaca atctttttcg gatcgatttg
    26341 cacatagcgg gtaccgacgc gatccattgc atggaagatc gacacgctat tgcgccgcgg
    26401 tggcgcgcca ggaatcacaa tatctgccag ttctgcaacg cgcggatcgt gatagtgatt
    26461 aagttcaatg atcactttct tcgcccgcag cagctaggtc ggcgcattac cgatcccgct
    26521 ggttaaccag actcgaccat ctgctgccag tgccgatgct tcgatgacgg caacatcaat
    26581 gtcgccgaag aaaccgtaat tgaccatttg cgccacttcg ctcaaatgca ggtcaacgaa
    26641 actcaccgca ccctgattga tctttttacg taaaccggac gatgtttgat atggtgcacg
    26701 ccatgaaaca gcatcggcgt cagaaagtac atcgtcagcg gcggcgctga ttgacgcccc
    26761 cgtcagcagg cgaatttgat acggcttttt ggcctcatgc tgttcgttag ctctgcgggc
    26821 aatcgcggtg ggtagggctt tcggtgaatc cgctggggta aagccactaa atgccaccat
    26881 gtcgttatgc tggataattt ctgccgcttc atcggcggtc atccttgtcc actgagtttc
    26941 catttttact ccttcgttcg cagggattaa tgaccaacga aattaggttt acgtttttcg
    27001 aggaaagcgt tcatcccttc ctggtaatct tcgctgtcat aaaccgcgcg gcgcatcccc
    27061 tgaatacgtt caaattcatc ggagttcatg gtgtgcgctt cgcccagtac acgcagctct
    27121 tctttgataa cagcaatggc taacggcgct ttctcagaga tgtggtgcgc catttgtaag
    27181 gtgaaatctt ccagttcttc cacttccaca acatggttga ggatgccgac agccagcgcg
    27241 cgctgggcgg tgattggcga agcggtaaaa atcagctctt tgacaatgtg gaagcccgtg
    27301 tcgcgggtca ggttgtgaat gccgactagg ttatacggga cgccgaggtt tacaggcgtc
    27361 attgagaagg ttgaggtatt ggcggcgatg atcagatcgg aactcatgat catttcaaat
    27421 gcgccacccc aaacactacc ttccaccatt gaaatgatcg gtttcgggaa tttttggatc
    27481 atgcgggtga tttgacgcaa cggatcatca taggagagcg gatcgcgacc gccagacggc
    27541 agttcgtgaa tatcgtggcc tgcggagaag actttggatc cactcggcgc gcgcaaaatg
    27601 atacagcgaa tttcgggccg gttgagatcg cttaatgcct gcataagatc atcaataaag
    27661 actttactta aggcattaag tttgcggcca tagttaaact caatgaccgc tactttgttg
    27721 atagtgacaa cgttaacata ctgataagac gtaaaaattc ctttaatcaa aatattgcgt
    27781 ctggataaat tcactgagct gccgcaggcc ggtgcgcggt gagtgcgtat tgtttttgac
    27841 cgctaaaagc gtctggcggt aatagcgatc gaaatcttca ttcgcgaaca ggtgattcag
    27901 tacttcttct tcggtctgct tacgcagcca ttccaccgat tgttgttgcc gcacttgttg
    27961 taaacgacca ctggcagtta gcgcggtttt gaagtcgatg atggcgtgcc agatctcatc
    28021 gattccacgt ttttccagtg cgctacaagt cagaacccgt ggctgccatt cgtcgtattt
    28081 acgtcgcaga atatgcaggg cactctcgta catatgccgg gcaatggcga cattggtatg
    28141 gttatcgcca tcgtctttgt tgataacgat cagatcagcc acttccatca gccctttttt
    28201 aatgccctgc agatcatcgc cgccaccggc aatttgcaac gagataaaac agtccaccat
    28261 gcgggcgact tccgtttccg actgcccgac gccaaccgtt tcgacaatca ctacgtcata
    28321 acccgccgct tcgcataaca gcattaattc ccgtgctcgc tgactggcac cgcccagatg
    28381 accggaggat ggtaccgggc gaataaacgc cgcctcggca cgcgccaggt cattcatgcg
    28441 ggttttatcc ccgagaatgc taccgccagt gaccgggctg ctgggatcga ccgcaataac
    28501 agcaaccttt aatccctcac gaatcaacaa catgccaaag gcttcaagaa aggtactttt
    28561 ccccgcgccg ggtgtgccgg taacgcccag tcgcagggcg ttaccacaga acggcataat
    28621 ggcgtcaagc agctgtgtac ttagcgcctg atgacgtggg tgacggcttt ccaccagcgt
    28681 catggcctgg gcgagcgtgg cacgctcacc ctgacgtaag cggcgaatac tttctgccag
    28741 cgtggcttca ttaatcatga tgctggctta tcagattcag tacgtcgcgc acactgtcga
    28801 gcataggtgt acctggacca taaatcgccg ccacgccgcg ctcttgcagg aaggcgtaat
    28861 cctgcggcgg aatgacgcca cccgcgacca cgcagatatc ttcgcgtccc cattttttca
    28921 gcgcttcgac cagttccggg atcagcgttt tatgaccggc agccagtgag gatgcgccca
    28981 ctacgtgaac gtcgttttct acggccaggc gggcgatctc ttcaggtgta gagaacatcg
    29041 ggcttaaatc tacgtcgaaa ccgagatcgg aataggcgct ggcgatcact ttcgcgccgc
    29101 gatcgtgtcc atcctggccc atcttagcga tcagaatgcg cgggcgacga ccattgtcgg
    29161 caaggaactg ctccgtttgc gcaacaatgg catcgaactc ggaggccgat ttctcagact
    29221 gatgatagct ttgcgcaatc acgccggtaa cacactggct tggcaccaga taacggtcga
    29281 aagcggcttc cagcgcatcg gaaatttcac ccagggtggc gcgaacgcga gcggcattaa
    29341 cagcggcagc cagcaggttt tcgttatgct gtgcggcgtg agtcagggcg ttcaacgcgg
    29401 cggttacggc ggcatcatca cgggtggcgc gaatgcgttc cagcgaagca atttgctcgt
    29461 tatgcaccat cacgttgtcg atctcaagta catcggtttc gtcttcgtga tccagtttgt
    29521 acttgttgac accaacgatg acacgcttgc cttggtcgat cagcgactgt tcgcgcgctg
    29581 aggcctcttc gatcattcgt tttggcagac ctgcttcgat cgctttcgcc atgccaccgg
    29641 cttcgtcgat ctgttggata atagctctgg cttgtttgac gatttgatcg gtcagcgact
    29701 caacgtaata ggatccggcc agcggatcga cggtgcggca gagttctgat tcttcctgga
    29761 tgatgatctg ggtgttgcgg gcaatgcgtg ctgagaaatc ggtaggcaaa ccaagcgctt
    29821 cgtcaaaggc gttggtatgc agtgactgag taccgcccag cgtcgcaacc agtgcttcaa
    29881 tggtggtgcg gataacgttg ttatacggat cctgttcagt caggctccag cctgaggtct
    29941 ggcagtgggt acgcagcgcc agtgatttcg ggtcctgtgc gccaaatcca ctgaccgctt
    30001 cgctccataa ataacgtgcc gcacgcaaca tggcgacgtt cataaacaga tccatgccga
    30061 tgccgaagaa gaacgacagg cgaggagcga agtcatcaat tttcagtccg gcagagattg
    30121 ctgctttgat gtactcaatc ccatcagcga gcgtaaatgc tacctgctgc acgcagttgg
    30181 cacccgcttc acctatgtgg taaccgctga tactgatggt attaaatcgc ggcatgttgc
    30241 cggaacacct ggcgatgatg tcggcgataa tgcgcattga cggttttggc gggtaaatat
    30301 aggtgttgcg gcagaggtac tctttgagga tatcgttctg aatggtgccg gtcagtttat
    30361 caggtgtaac accttgctct tccgcggcga cgatataaaa cgccagtact ggtagcactg
    30421 cgccattcat ggtcatcgaa accgacattt tatccagcgg gatctggtcg aacaggactt
    30481 tcatatcttc cacggtgtcg atagcgacgc ccgctttgcc gacgtcgccc gccacgcgcg
    30541 ggttatcgga gtcgtagcct cggtgggtgg caaggtcaaa cgcaacggaa agaccttttt
    30601 gcccggcggc caggttacgg cgataaaaag cgttggactc ttttgctgtt gaaaaaccag
    30661 catactgacg gatggtccac ggttggacgg tatacatagt ggcacgcggg ccacgaacgt
    30721 agggcggcaa accaggaagg gtacctgtca cctccagatt atcgagatcg gcttcggtat
    30781 acagcggctt gatggcgatc ccttccgcgg tttgctgaac cagcgagtcg acagttttct
    30841 cccgacggct caattccttg ttggcaagct gttgccactc ctgcacgtta gacattattt
    30901 gctccgtaaa acgcaatcaa aatgagggta tttgcgccta cggtgagctt tttacgtggg
    30961 tttgtcgcca gcaaaaaaaa tgcattcaga cgtcgttttt tgccgcctga gatttgtcta
    31021 ttttgtgatg tgattcaagg aatacaaaaa gaagtgaggg caacgcctga tatgtgctac
    31081 caggcattat ttgatggatt aatcctgacg aaggactttg tgaccataat cgagtaacgc
    31141 atcagtgact ttacgcatca tgcggctttc aggagcaaag cggtgccagt agagcatccg
    31201 tcgttgaaat agcccaggcg ttaagtcaat cagttcaccg ctggccagct ctttctcgat
    31261 ttgcaggtgc gggatcatac agcaggtggt gccctggcga gcaagttgta cgaacgcttc
    31321 tgaagaatta acgatatggc agggcacgct gcctggaggc agatcgaagt tttgctgcaa
    31381 aaaggcttgg tgcatatcgt caagatggtc aaacgcgacc actggcgctt tcagtaatgc
    31441 cgaacgcgtt acgccgttag ggaaatattt ttcggcaaag ggttttgagc tgacgaacag
    31501 atagtcgagc gcaccaagtt tatcgacaag acaactcggc agcgcctgat gttgaatact
    31561 caccgcgccg accacttcgc cgcggcgcag acgttcctga gtgcgggttt catcttctac
    31621 ctgcaagttg aggcggatag gcgaatcagc caacacagga gccagtgcag gaagcaacca
    31681 cgtcgccaga ctgtcggcgt tgaccgccag tgaaagcagc agcggagtcg aaccggtttg
    31741 ttcatcgccc agccactctt cttccagcaa ctccacctgg cgcagcagtg ccagcagttt
    31801 ttgcccttgt tccgtcgggc gcggcggtac ggtacgcacc aacagcggct gcccgaacat
    31861 attttccagt tgcttaatgc gctgtgagac ggctgattgt gtaatgcaca gcttttgtgc
    31921 cgcgcgctca aatcctcgtt cacgtatcac cgcatccagt gcctgtaatg ttctgtagtc
    31981 cgggcgtttc attgctgttg tctgctcctg gtaaatgctt tttcctgcac tatgacacaa
    32041 ttttgtgtca ggttgcatat accgcagccg tcggcgggta acatttgtat caatggttaa
    32101 acgcgcagct taaaagatca gggatttgcg ctattgcatt tcgcttagcg acttcgcgcc
    32161 ctagttatgt tgaatggcgt ggcgttattg cctctgttca caccgtggag cggcataccc
    32221 agaccgttgt atgctttatt tgcggggcga aacattgcgc gatattttat ggatgagtta
    32281 accacgcggc ttgccaacgg ggtctgaatc gctttttttg tatataatgc atgtgaaatt
    32341 tcataccaca ggcgaaacga tcatgacgca ggatgaattg aaaaaagcag taggatgggc
    32401 ggcacttcag tatgttcagc ccggcaccat tgttggtgta ggtacaggtt ccaccgccgc
    32461 acactttatt gacgcgctcg gtacaatgaa aggccagatt gaaggggccg tttccagttc
    32521 agatgcttcc actgaaaaac tgaaaagcct cggcattcac gtttttgatc tcaatgaagt
    32581 cgacagcctt ggcatctacg ttgatggtgc agatgaaatc aacggccaca tgcaaatgat
    32641 caaaggcggc ggcgcggcgc tgacccgtga aaaaatcatt gcttcggttg cggaaaaatt
    32701 tatctgtatt gcagacgctt ccaagcaggt tgatattctg ggcaaattcc cgctgccagt
    32761 agaagttatc ccgatggcac gtagtgcagt ggcgcgccag atggtgaaac tgggcggtcg
    32821 tccggaatac cgtcagggcg tagtgaccga taatggcaac gtgatcctcg acgtccacgg
    32881 tatggaaatc cttgacccga tagcgatgga aaacgccata aatgcgattc ctggcgtggt
    32941 gactgttggc ttgtttgcta accgtggcgc ggacgttgcg ctgattggca cacctgacgg
    33001 tgtcaaaacc attgtgaaat gatctgacgg gggaacctcc cccgttaaaa aaattctctt
    33061 cattaaattt ggtgacatgt gtcacgcttt taccaggcaa ttgtcgattg ctctaaataa
    33121 atcctctaaa ccagcatatt catccaagaa ttacctttgc gtgatatttc ctcaacatcg
    33181 cgacgcaaac gttcatattg ccgcaatatt attttttgat atgttgaaag gcggatgcaa
    33241 atccgcacac aacatttcaa aagacaggat tgggtaaatg gcaaaggtat cgctggagaa
    33301 agacaagatt aagtttctgc tggtagaagg cgtgcaccaa aaggcgctgg aaagccttcg
    33361 tgcagctggt tacaccaaca tcgaatttca caaaggcgcg ctggatgatg aacaattaaa
    33421 agaatctatc cgcgatgccc acttcatcgg cctgcgatcc cgtacccatc tgactgaaga
    33481 cgtgatcaac gccgcagaaa agctggtcgc tattggctgt ttctgtatag gaacaaacca
    33541 ggttgatctg gatgcggcgg caaagcgcgg gatcccggta tttaacgcac cgttctcaaa
    33601 tacgcgctct gttgcggagc tggtgattgg cgaactactg ctgctattgc gcggcgtgcc
    33661 ggaagccaat gctaaagcgc accgtggcgt gtggaacaaa ctggcggcgg ggtcttttga
    33721 agcgcgcggc aaaaagctgg gtatcatcgg ctacggtcat attggtacgc aattgggcat
    33781 tctggctgaa tcgctgggaa tgtatgttta cttttatgat attgaaaaca aactgccgct
    33841 gggcaacgct actcaggtac agcatctttc tgacctgctg aatatgagcg atgtggtgag
    33901 tctgcatgta ccagagaatc cgtccaccaa aaatatgatg ggcgcgaaag aaatttcact
    33961 aatgaagccc ggctcgctgc tgattaatgc ttcgcgcggt actgtggtgg atattccggc
    34021 gctgtgtgat gcgctggcga gcaaacatct ggcgggggcg gcaatcgacg tattcccgac
    34081 ggaaccggcg accaatagcg atccatttac ctctccgctg tgtgaattcg acaacgtcct
    34141 tctgacgcca cacattggcg gttcgactca ggaagcgcag gagaatatcg gcctggaagt
    34201 tgcgggtaaa ttgatcaagt attctgacaa tggctcaacg ctctctgcgg tgaacttccc
    34261 ggaagtctcg ctgccactgc acggtgggcg tcgtctgatg cacatccacg aaaaccgtcc
    34321 gggtgtgcta actgcgctga acaaaatctt cgccgagcag ggggtcaaca tcgccgcgca
    34381 atatctgcaa acttccgccc agatgggtta tgtggttatt gatattgaag ccgacgaaga
    34441 cgttgccgaa aaagcgctac aggcaatgaa agctattccg ggtaccattc gcgcccgtct
    34501 gctgtactaa ttccccttct ctgaaaatta acgggcaggt cactgacttg cccgtttttt
    34561 atcccttctc cacaccgctg ccgcgttgcg cattttactt tgcgagtctg ctccagaaaa
    34621 taaatcaaag tcagatcaat gcgttgtgct tatttaatgg ggatttacga tggcaggaca
    34681 gcacagggct gtaacggtaa agccctcacc gaagcgaggg cttgaaggag aagggttatg
    34741 atgcgacttg tcatcatact gattgtactg ttactcataa gtttcagcgc ttattaacag
    34801 tcagtcacag gggaggagca atcctccctt acccttactc actaaattag gttaaagaat
    34861 caacgatgtc aatcagggcg atgtaggtgt gtcgccctca ccactcccag actttcgacg
    34921 gtgtaaccac cgcaggaaga gggatatccc actcttcaac ggggagtttt tccaccaact
    34981 gacaatcatg cgcatacccc accggttgca ttttatagtg ctgccagttt tgtaaggtcc
    35041 gatcataaaa accaccgccc attcccaggc gctggccgta ctcatcaaag gcgaccagcg
    35101 gtgtgatcaa cacgtctaat cgggaaaggg gtagcacgtc acgcacatcc aattttggct
    35161 catggatctt caacctgttc atcaccagtt cgctttgcgg atggtaattc aggaacagca
    35221 aattaccggc actaaaggga tgcaaaactg gaagatatac gcgcttaccg gcgcgccaga
    35281 gttgttctat gagtggctgg gtgtcgagtt cgccatcaaa agagaggaat acagcgaccg
    35341 tatgtgccat caccaccggg ggataagtca tcatccgggt agcggcttgt tgacccattt
    35401 cctgctgttg ttccggcgtt aacgcacgac gacgttgccg aatcattttg cggatttctt
    35461 gtcgggataa tatcagtggg agttctggta gttgcgtcat ggctggtgcc agataagaag
    35521 ggaatctccg agatgccgcc gcaggctgta acccttgaac ccttggttca aggtgaatgt
    35581 gtcgtcgcag ttttaaggct tctcggacga accgagcatg ctcaccaacc gcggagcgcc
    35641 acattcttgt ggtatgaaat atcggctcag gggactggcc cgcttgcgaa catctcagag
    35701 aaattttgtc ttcacggtta ctctaccaca gtaaaccgaa aagtgtcatt caaagttttg
    35761 gttagttttt tcggtgatgc gaccttgttc aagtaacgct tgttctatgg tctgctgcag
    35821 catccgaata cgctgttcca tacttgccgc gtagtcacga gtcttcgctt tttcttgcgc
    35881 taactcatag ctgatattca atgcggcaat gaagaccaac tgttcagtat ttgtgactct
    35941 agtgcgttct ttcagatctt gcaaccgttg gttcagatcg tccgctgcct gattcaacgc
    36001 atccctttgg tcaggcgggc agttcacacg cagtgaacgg ccaaaaattt ggatatcgac
    36061 gggttgtgca gacatgccac cttcctgctg attgactgcg ctgccttcgt ctttagaccc
    36121 atggtctgcg aaggggcgac actatagcta ccctgatgag aagagacaag cccttttctg
    36181 gtccaccagg gcccaaagtg gtagcatatc atgaatattc ctccctttga cgacgaatgc
    36241 ttatgtctat acagaacgaa atgcctggtt acaacgaaat gaaccagtat ctgaaccaac
    36301 aagggacggg tctgacccct gccgagatgc atggtttaat cagtgggatg atatgtggcg
    36361 gtaacgatga cagctcatgg ctgccgctac ttcacgacct gacgaacgaa ggcatggctt
    36421 tcggtcatga gctggcacag gcactgcgta aaatgcactc tgccaccagc gatgccctgc
    36481 aggatgacgg cttccttttt cagctttatc tgcctgatgg cgatgatgtc agcgttttcg
    36541 atcgggctga tgcactggca ggttgggtca atcacttcct gcttggtctt ggcgttacgc
    36601 aaccgaagct ggacaaagtg accggagaaa ccggtgaagc catcgacgat ctgcgtaaca
    36661 tcgcgcagct gggctacgac gaagacgaag atcaggaaga gcttgaaatg tcgcttgaag
    36721 agatcatcga atacgttcgt gttgccgcgc tgttatgcca cgacaccttt actcatccgc
    36781 aaccgaccgc gccagaagta caaaaaccga ctctacacta aaaacaaaaa acgtaaggag
    36841 agtgttatga gtgagatatc ccggcaagag tttcagcgtc gccgtcaggc cctggtggag
    36901 caaatgcaac ccggcagcgc cgcgctgatt tttgctgcac cagaagtaac acatagcgcc
    36961 gacagcgaat acccctatcg tcagaacagt gacttctggt acttcaccgg ctttaacgaa
    37021 ccggaagcgg tgctggtgct gattaaaagc gatgacactc ataaccacag cgttctgttt
    37081 aaccgcgttc gcgacctgac ggcggagatc tggtttggcc gtcgcttagg ccaggatgcc
    37141 gcgccagaga aactgggcgt tgaccgcgca caggcattca gcgaaatcaa tcagcaactt
    37201 tatcaactac ttaacggcct ggatgtggtt taccatgccc agggcgaata tgcatatgct
    37261 gatgaaatcg tgaacagtgc gctggaaaaa ctgcgtaaag gttcgcggca aaatctcacc
    37321 gcaccggcaa cgatgatcga ctggcgtcct gttgttcatg aaatgcgcct gttcaaatcg
    37381 ccagaagaga ttgccgtact ccgccgcgcg ggagaaatca ccgccatggc acatacacgg
    37441 gcgatggaaa aatgccgtcc gggaatgttc gagtaccatc tggaaggcga aattcaccac
    37501 gaatttaacc gccacggtgc gcgctatccg tcctataaca ccattgtcgg cagcggtgaa
    37561 aacggctgca ttctgcacta caccgaaaac gagagtgaac tgcgcgacgg tgacctggtg
    37621 ttgattgacg cgggttgtga atacaaaggt tacgcgggcg atattacccg caccttcccg
    37681 gtcaacggca aattcaccca ggcccagcgt gaaatctacg acattgtgct ggagtctctc
    37741 gaaaccagcc tgcgcctgta tcgtccggga acttccattc tggaagtcac tggtgaagtg
    37801 gtgcgcatca tggttagcgg cctggtaaaa ctcggcatcc tgaaaggtga tgttgatgaa
    37861 ctgatcgctc agaacgccca tcgtcctttc tttatgcatg gccttagcca ctggttagga
    37921 ctggatgtcc atgacgttgg cgtttatggt caggatcgct cgcgcattct ggaaccgggg
    37981 atggtactga ccgtagagcc tggtctgtat atcgcgccgg atgcggatgt gccagaacaa
    38041 tatcgcggta tcggcattcg tattgaagac gacattgtga ttaccgaaac cggcaacgaa
    38101 aacctcaccg ccagtgtggt gaaaaagccg gaagaaatcg aagcgttgat ggctgctgcg
    38161 agaaagcaat gagcgtaatc atcgtcggtg gcggcatggc gggcgcgacg ctggcgctgg
    38221 ctatttcccg gttaagtcac ggggcgctgc cggtacattt gattgaagcg actgcgccag
    38281 agtcacatgc tcatccgggc tttgatggac gagcgatagc gctggcggcg ggtacctgtc
    38341 agcaactggc gcgcatcggc gtctggcaat ctctggcgga ttgcgcaact gccatcacca
    38401 ccgtgcatgt cagcgatcgt ggtcacgctg gatttgtcac cctcgccgca gaagattacc
    38461 aactggcggc gctgggacag gttgtcgaat tgcacaatgt cgggcaacgg ctgtttgcat
    38521 tgctgcgtaa agcacctggc gtaacgctgc attgccctga tcgcgtggct aacgttgccc
    38581 gtactcagag tcacgttgaa gtgacgctgg agagtggcga gacgctgacg ggccgcgtgc
    38641 tggtagccgc tgatggcacc cattcagcgt tagccaccgc gtgcggcgtt gactggcagc
    38701 aggagcctta cgaacaactg gcagtgattg ccaacgttgc tacttctgtt gcgcacgaag
    38761 gccgcgcttt tgaacgcttc acgcaacatg gcccgctggc gatgttgccg atgtctgacg
    38821 gacgctgttc gctggtctgg tgtcatccac tggaacggcg cgaagagctg ctgtcgtgga
    38881 gtgacgagaa gttttgccgt gaactccagt cggcctttgg ctggcgactt ggaaaaatta
    38941 cccacgccgg taaacgcagt gcttatccgc tggcgttaac ccgcgccgcc agagctatta
    39001 cccatcgtac cgtgctggtg ggcaatgcgg cgcaaactct gcacccgatt gccgggcaag
    39061 ggtttaacct cggtatgcga gatgtgatga gtcttgcgga aaccctgact caggcgcagg
    39121 agcgcggaga agacatgggg gattacggcg tattgtgccg ttatcagcag cgtcgacaga
    39181 gcgatcgcga agcaaccatt ggcgtcacgg acagccttgt acatcttttt gccaaccgtt
    39241 ggacgccgct ggttgtcggg cgcaacattg ggctgatgac gatggaatta tttaccccgg
    39301 cacgcgatgt gctggcgcag cgcactctcg gttgggtggc gcgttgaagg cggttttaag
    39361 gaataaacaa tgcaaagtgt tgatgtagcc attgttggcg gcggcatggt ggggctggcg
    39421 gttgcctgcg gcttacaggg gagcggctta cgcgttgccg tactggagca gcgcgtaccg
    39481 gaacctctgg cggtagatgc actaccacaa ctgcgcgttt cggctatcaa tgccgccagc
    39541 gaaaaattac tcacccgtct tggcgtctgg caggacattc tcgctcgtag ggccagttgc
    39601 tatcacggca tggaagtgtg ggacaaagac agttttggtc acatctcgtt tgacgatcaa
    39661 agcatgggct atagccatct tgggcacatc gttgaaaact cagtgattca ctacgcgctg
    39721 tggaacaaag cgcagcagtc gtcagatatt actctgttgg cccccgcaga attacagcag
    39781 gtcgcctggg gagaaaatga aaccttcctg acgctgaaag atggcagcat gttaacggcg
    39841 cgtctggtga ttggtgcgga tggcgctaat tcctggttgc gcaacaaagc cgatattccg
    39901 ctgactttct gggattatca gcatcacgcg ctggtagcga ccattcgcac ggaagaaccg
    39961 catgatgcgg tggcgcggca ggttttccat ggcgaaggca ttctggcctt tttaccgctt
    40021 agcgatccgc atctttgctc gattgtctgg tcactgtcgc cagaggaagc gcagcggatg
    40081 cagcaggcag gggaagacga atttaatcgt gcgttaaata tcgcttttga taatcgcctg
    40141 ggcttatgca aggttgagag cgagcgtcag gtgttcccgc tgacggggcg ttatgcccgc
    40201 cagtttgctg cacaccgtct ggcgctggtg ggcgacgctg cgcataccat tcacccgctg
    40261 gcggggcagg gcgttaatct cggctttatg gatgctgcag agctgattgc tgaactgaaa
    40321 cggttgcatc gtcaggggaa agacatcggg cagtacattt atctgcgtcg ctatgagcgt
    40381 agccgcaagc acagtgcggc gttgatgctg gctggtatgc agggattccg cgatctgttt
    40441 tccggtacca atccggcgaa aaaactgctg cgtgatattg gtttgaaact ggccgacacg
    40501 cttcctggcg ttaagccgca acttatccgc caggcaatgg gattaaacga tttgcctgaa
    40561 tggctgcgtt aaaaatttct cctctgttgt ttatttgata cccatcacac tttcatctcc
    40621 cggttttttc gccgggagat tttcctcatt tgaaataaac taatttcacc tccgttttcg
    40681 cattatattt tctaatgtca tgattttttg atttagtgtt ttttgacatt tttttagctc
    40741 ttaatattgt cttattcaaa ttgactttct catcacatca tctttgtata gaaactggtg
    40801 tattttttgg ttttttattc tgtcgcgatt tttgcatttt ttaaccataa gctaatgtga
    40861 tgatcaattt taccttatgg ttaacagtct gtttcggtgg taagttcagg caaaagagaa
    40921 cgattgcgtt ggggaccggg agtggctccg atgctgggtt tcgtggtgat aatttcacca
    40981 tgaaaaagtt gtcagccccg cttattcaat gaggacaaga tggcacaaca gactcctttg
    41041 tacgaacaac acacgctttg cggcgctcgc atggtggatt tccacggctg gatgatgccg
    41101 ctgcattacg gttcgcaaat cgacgaacat catgcggtac gtaccgatgc cggaatgttt
    41161 gatgtgtcac atatgaccat cgtcgatctt cgcggcagcc gcacccggga gtttctgcgt
    41221 tatctgctgg cgaacgatgt ggcgaagctc gccaaaagcg gcaaagccct ttactcgggg
    41281 atgttgaatg cctctggcgg tgtgatagat gacctcatcg tctactactt tactgaagat
    41341 ttcttccgcc tcgttgttaa ctccgccacc cgcgaaaaag acctctcctg gattacccaa
    41401 cacgctgaac ctttcggcat cgaaattacc gttcgtgatg acctttccat gattgccgtg
    41461 caagggccga atgcgcaggc aaaagctgcc acactgttta atgacgccca gcgtcaggcg
    41521 gtggaaggga tgaaaccgtt ctttggcgtg caggcgggcg atctgtttat tgccaccact
    41581 ggttataccg gtgaagcggg ctatgaaatt gcgctgccca atgaaaaagc ggccgatttc
    41641 tggcgtgcgc tggtggaagc gggtgttaag ccatgtggct tgggcgcgcg tgacacgctg
    41701 cgtctggaag cgggcatgaa tctttatggt caggagatgg acgaaactat ttctccttta
    41761 gccgccaaca tgggctggac tatcgcctgg gaaccggcag atcgtgactt tatcggtcgt
    41821 gaagccctgg aagtgcagcg tgagcatggt acagaaaaat tggttggtct ggtgatgacc
    41881 gaaaaaggcg tgctgcgtaa tgaactgccg gtacgcttta ccgatgcgca gggcaaccag
    41941 catgaaggca ttatcaccag cggtactttc tccccgacgc tgggttacag cattgcgctg
    42001 gcgcgcgtgc cggaaggtat tggcgaaacg gcgattgtgc aaattcgcaa ccgtgaaatg
    42061 ccggttaaag tgacaaaacc tgtttttgtg cgtaacggca aagccgtcgc gtgatttact
    42121 tttttggaga ttgattgatg agcaacgtac cagcagaact gaaatacagc aaagaacacg
    42181 aatggctgcg taaagaagcc gacggcactt acaccgttgg tattaccgaa catgctcagg
    42241 agctgttagg cgatatggtg tttgttgacc tgccggaagt gggcgcaacg gttagcgcgg
    42301 gcgatgactg cgcggttgcc gaatcggtaa aagcggcgtc agacatttat gcgccagtaa
    42361 gcggtgaaat cgtggcggta aacgacgcac tgagcgattc cccggaactg gtgaacagcg
    42421 aaccgtatgc aggcggctgg atctttaaaa tcaaagccag cgatgaaagc gaactggaat
    42481 cactgctgga tgcgaccgca tacgaagcat tgttagaaga cgagtaacgg ctttattcct
    42541 cttctgcggg agaggatcag ggtgaggaaa atttatgcct caccctcact ctcttcgtaa
    42601 ggagagaggt tcacaattca ctgcacgttt caggaaccat cgctcatgac acagacgtta
    42661 agccagcttg aaaacagcgg cgcttttatt gaacgccata tcggaccgga cgccgcgcaa
    42721 cagcaagaaa tgctgaatgc cgttggtgca caatcgttaa acgcgctgac cggccagatt
    42781 gtgccgaaag atattcagct tgcgacacca ccgcaggttg gcgcaccggc gaccgaatac
    42841 gccgcactgg cagaactcaa ggctattgcc agtcgcaata aacgcttcac gtcttacatc
    42901 ggcatgggtt acaccgccgt gcagctaccg ctggttatcc tgcgtaacat gctggaaaat
    42961 ccgggctggt ataccgcgta cactccgtat caacctgaag tctcccaggg ccgccttgaa
    43021 gcactgctca acttccagca ggtaacgctg gatttgactg gactggatat ggcctctgct
    43081 tctcttctgg acgaggccac cgctgccgcc gaagcaatgg cgatggcgaa acgcgtcagc
    43141 aaactgaaaa atgccaaccg cttcttcgtg gcttccgatg tgcatccgca aacgctggat
    43201 gtggtccgta ctcgtgccga aacctttggt tttgaagtga ttgtcgatga cgcgcaaaaa
    43261 gtgctcgacc atcaggacgt cttcggcgtg ctgttacagc aggtaggcac taccggtgaa
    43321 attcacgact acactgcgct tattagcgaa ctgaaatcac gcaaaattgt ggtcagcgtt
    43381 gccgccgata ttatggcgct ggtgctgtta actgcgccgg gtaaacaggg cgcggatatt
    43441 gtttttggtt cggcgcaacg cttcggcgtg ccgatgggct acggtggccc acacgcggca
    43501 ttctttgcgg cgaaagatga atacaaacgc tcaatgccgg gccgtattat cggtgtatcg
    43561 aaagatgcag ctggcaatac cgcgctgcgc atggcgatgc agactcgcga gcaacatatt
    43621 cgtcgtgaga aagcgaactc caacatttgt acttcccagg tactgctggc aaacatcgcc
    43681 agcctgtatg ccgtttatca cggcccggtt ggcctgaaac gtatcgctaa ccgcattcac
    43741 cgtctgaccg atattctggc ggcgggcctg caacaaaaag gtctgaaact gcgccatgcg
    43801 cactatttcg acaccttgtg tgtggaagtg gccgacaaag cgggcgtact gacgcgtgcc
    43861 gaagcggctg aaatcaacct gcgtagcgat atcctgaacg ccgtggggat cacccttgat
    43921 gaaaccacca cgcgtgaaaa cgtaatgcag cttttcagcg tgctgctggg cgataaccac
    43981 gggctggaga tcgacacgct ggacaaagac gtggctcacg acagccgctc tattcagcct
    44041 gcgatgctgc gcgacgacga aatcctcact catccggtgt ttaatcgcta ccacagcgaa
    44101 accgaaatga tgcgctatat gcactcgctg gagcgtaaag atctggcgct gaatcaggcg
    44161 atgatcccgc tgggttcctg caccatgaaa ctgaacgccg ccgccgagat gatccccatc
    44221 acctggccgg aatttgccga actgcacccg ttctgcccgc cggaacaggc cgaaggttat
    44281 cagcagatga ttgcgcagct ggctgactgg ctggtgaaac tgaccggtta cgacgccgtt
    44341 tgtatgcagc cgaactctgg cgcacagggc gaatacgcgg gcctgctggc gattcgtcat
    44401 tatcatgaaa gccgcaacga agggcatcgc gatatctgcc tgatcccggc ttctgcgcac
    44461 ggaactaacc ccgcttctgc acatatggca ggaatgcagg tggtggttgt ggcgtgtgat
    44521 aaaaacggca acatcgatct gactgatctg cgcgcgaaag cggaacaggc gggcgataac
    44581 ctctcctgta tcatggtgac ttatccttct acccacggcg tgtatgaaga aacgatccgt
    44641 gaagtgtgtg aagtcgtgca tcagttcggc ggtcaggttt accttgatgg cgcgaacatg
    44701 aacgcccagg ttggcatcac ctcaccgggc tttattggcg cggacgtttc gcaccttaac
    44761 ctgcataaaa ctttctgcat tccgcacggc ggtggtggtc cgggtatggg accgatcggt
    44821 gtgaaagcgc atttggcacc gtttgtaccg ggtcatagcg tggtgcaaat cgaaggcatg
    44881 ttaacccgtc agggcgcggt ttctgcggca ccgttcggta gcgcctctat cctgccaatc
    44941 agctggatgt acatccgcat gatgggcgca gaagggctga aaaaagcaag ccaggtggca
    45001 attcttaacg ccaactatat tgccagccgc ctgcaggatg ccttcccggt gctgtatacc
    45061 ggtcgcgacg gtcgcgtggc gcacgaatgt attctcgata ttcgcccgct gaaagaagaa
    45121 accggcatca gcgagctgga tattgccaag cgcctgatcg actacggttt ccacgcgccg
    45181 acgatgtcgt tcccggtggc gggtacgctg atggttgaac cgactgaatc tgaaagcaaa
    45241 gtggaactgg atcgctttat cgacgcgatg ctggctatcc gcgcagaaat tgaccaggtg
    45301 aaagccggtg tctggccgct ggaagataac ccgctggtga acgcgccaca cattcagagc
    45361 gaactggtcg ccgagtgggc gcatccgtac agccgtgaag ttgcggtatt cccggcaggc
    45421 gtggcagaca aatactggcc gacggtgaaa cgtctggatg atgtttacgg cgaccgtaac
    45481 ctgttctgct cctgcatacc gattagcgaa taccagtaat tcactgattc gactatcttc
    45541 taaaggcgct tcggcgcctt tttagtcaga tgacaaagta caaaagtgct cagacagtcc
    45601 cctcgcccct ttggggagag ggttagggtg aggggaacag gccggcactg gcgcgaatat
    45661 ttcccctcac cccggccctc tccctgaaag ggcgagggga aaagcgtgcc aacattgaag
    45721 attgagccag tttgttagca atctcaaaga tacgtcaacg aattaatttt tctcggaaaa
    45781 acaaatggct atagcacttg tgaccggtgg cagtcgcggc atcgggcggg caactgcatt
    45841 actgttggcg aaagaagagt atacggtggc ggttaattat caacaaaacc tccatgcggc
    45901 gcaggaagtg gtgaacttaa tcacgcaagc cggtggcaag gcattcgtgc tccaggcgga
    45961 tatcagcgac gaaaatcagg tcatcgcaat gtttacagca atcgatcagc acgatgaacc
    46021 gctagcagcg ctggtcaata acgccgggat cttgtttacc cagtgcaccg ttgaaaacct
    46081 taccgcagag cgaatcaacc gagtactttc caccaacgtg acgggatatt ttctctgctg
    46141 ccgcgaggcg gtaaaacgca tggcgcttaa aaatggtggc agtggcggcg ctatcgtcaa
    46201 tgtctcttcg gtggcctcac ggttgggttc gccaggggaa tatgttgatt acgcggcatc
    46261 gaaaggggcg attgatacgt taaccaccgg actatcgctg gaagtcgccg cgcagggggg
    46321 ccgcgttaac tgcgtgcggc tagggtttat ttttaccgaa atgcacgcca gcggcggcga
    46381 gcctggacgc gtcgatcgcg ttaagtcgaa catccccatg cagcgtggtg gacaggcaga
    46441 agaggtcgcg caggccattg tctggctact aagtgataaa gcctcttacg tcacgggaag
    46501 ttttatcgat ttggcgggcg ggaaataaaa cagggaagtt gtctgaccgg atgcaacaag
    46561 tattgcatcc ggtacttcat cgacttaaag cttctcgccg ttgctggcaa tcacctcttt
    46621 gtaccagtta aagctcttct tacgtgaacg cgacatatcg ccagtaccgt cgtcatgttt
    46681 attcacatag ataaagccgt agcgtttgct gtactgcccg gtggtgaacg atacgcagtc
    46741 gatgcagccc cacggtgtgt agcccatcag atccacgcca tcgtaagtca ccgctttttt
    46801 catctcttcg atatgggcgc gcaggtagtc aatgcggtag tcgtcgttga tgctgccatc
    46861 ttcttccact ttgtcgtaag cgccaaaacc gttttcgaca ataaacagcg gcctctgata
    46921 acgctcatac agttcgcaaa gggcatagcg cagacctact ggatcaatct gccagcccca
    46981 gtcagacgct ttaacatacg ggttcggtac gctgccttcg aaaccagaga tcgcatcgcc
    47041 ggtgccgcct tcggccttca ctgcgttggt catgtaatag ctgaaaccaa gataatcgca
    47101 ggtgcctttg cgcagtacat ccagatcgcc atcttccatt ttgatgttaa atccgcgacg
    47161 ctcccactcg ttcaacacat aggacgggta atagccgcgt agctgcatat cggtaaagac
    47221 gtagcgttcg cgcatcgact cctgagcgaa catcacatcg tccgggttac aggagtaagg
    47281 atagagcggc accatcgcca gcatacagcc gactttcatc tccgggttaa tgcgacgcgc
    47341 agctttcacc gccagggcgc tggcgacaaa ctggtgatgc agcacctgat acatcgtctc
    47401 ttccgggttc tcatgctcgg tataaaccac gccggagcag cagtaaccga acagcggtgc
    47461 acgccagtta cgctggttgt taatttcgtt gaaggtcatc cagtatttga ctttatgctt
    47521 atagcgttca aataccactt ccgcgaaacg gacaaagaaa tcaaccactt tacggttggt
    47581 ccagctaccg tattgctgca ccagatgcag cggcatttca aagtgggaga gggtgatcac
    47641 tggttcgatg ttgtatttca gcaattcatc gaacagagag tcgtaaaact tcagcccttc
    47701 ttcgtttggc tgagcttcat cgccttttgg aaaaatgcgc gtccaggcga tggatgtacg
    47761 aaaacatttg aagcccattt cggcaaatag cttgatgtct tccttgtagt gaccataaaa
    47821 atcaacggct tcatggtttg gatagtattt tcctggcaag acttctttgg tgatttcgcg
    47881 cggcacgccg tgtgcgccac cggtcagaac gtcacaaatg ctcggccctt tgccgccttt
    47941 gttccagccg ccttcgacct gatgagcggc aactgcgccg ccccataaga aatctttcgg
    48001 taaggtgagt tttttcacta tcataggctc cagatgagtc aattcttaca ggaaatagta
    48061 ccatgcagcc aaacgacatc actttttttc aacgtttcca ggatgacatt ctggctgggc
    48121 gtaaaaccat caccatccgc gacgagtctg aatcgcactt caaaacgggt gatgtgcttc
    48181 gtgtcgggcg ttttgaagat gacggttatt tttgcacgat tgaagtcacc gcaacctcaa
    48241 ccgtaacgct ggatacgctg acggaaaaac atgcagagca ggaaaatatg accctgactg
    48301 aactgataaa ggtcattgcc gacatctatc ccggtcagac acagttttat gtgattgaat
    48361 ttaaatgtct ttaaattgaa ctcacgcctg ttagttgaaa tttcgcattt aatttcatga
    48421 tttttaggag attagtctca aatcagaatt tattttagct aacaggtgtt cactggaact
    48481 attctcagtt acgctggaga ggtatacatg tgcgtgtacg tttctccgga gtaagttatg
    48541 gttcagaagc ccctcattaa gcagggatat tcgctggcag aggaaattgc caacagcgtc
    48601 agtcacggca ttgggttggt gtttggtatc gttgggctgg tgttgctact ggttcaggcg
    48661 gtggatctca atgccagcgc cacagcgata accagctaca gcctctatgg cggcagtatg
    48721 atcctgctgt tcctcgcttc gacgctctat cacgccattc ctcatcaacg ggcaaaaatg
    48781 tggctgaaga aatttgacca ttgcgctatt tacctattga ttgccggaac ctacacgccg
    48841 tttttgctgg tggggctgga ttctccgtta gcgcgcgggt tgatgattgt tatctggagc
    48901 ctggcattgc tggggattct gttcaaacta accatcgcgc accgattcaa aattttatct
    48961 ctggtgacct atctggcgat gggctggctg tcgctggtgg taatttatga aatggcagtt
    49021 aagctcgcgg cgggcagcgt taccttactg gcggtaggcg gcgtggtcta ctcgctcggg
    49081 gtgattttct acgtctgcaa gcgcatccca tacaaccatg ccatctggca cggctttgtg
    49141 ctcggcggta gtgtgtgcca ctttctggcg atctatttgt atattgggca ggcgtaatgg
    49201 gtatgccttt gtaggcctga aaagacgcgt cagcgtcgca tcaggcgata aatgcctgat
    49261 gcgataaaga gatttactct tcgagcgaat acggcagcgg ctcgatatgc aatgtattcg
    49321 catcgtcgcg tacgcggaag atgctgtccg gttccatatc gttattcatc actacctgaa
    49381 ccacgacctg accatcttcc agttttaccg cagccagcac cgtaccggta cgacgccagt
    49441 tctcgcccat tttcagctct aagtcttcac cggcttccgg cagtcggctg gcgctaccag
    49501 tcagcaacca gagcgcgcgt ttgttggcac cacggaattt agctcgcgcc accatctctt
    49561 gtccggtata gcagcctttt ttaaagctaa tgccgcccag cgcctggagg ttggtcgcct
    49621 gtgggataaa ctgcccgctg ttcgcggcat caatcaccgg gaaacccgct tcaatgttta
    49681 atgccagcca ctgttggcta ttgttcagtt ccgcttcacc gcgcagttta tcggtcagca
    49741 tattggcagt agcttcatcg gttacgatca ggaaacgttc tgccgggtgt ccaaaccata
    49801 gcaaagtggt cgcgccttct ttaactacct gtttttctct cgaaggtagt tcactaaaga
    49861 gattggccag cgcggcgcgc gcctgaaaac cggcaacacc aagcagcaca cgctcgtcgt
    49921 ctggcgcgat ggtcacttta gagaacaccg catatttttt cagttcagtc agctgcggtt
    49981 cacgcacgct gcgccgttca atccacgcaa agccatcgcc gtcgcggaac agacgtaaat
    50041 tgctccacat tttacctttg gcgtcgcaat gggcggcgag caggtgctga ttttctgtca
    50101 tctggctgac atctgctgtc acctggccct gcatatattt ttcgctgtcc gcgccagtaa
    50161 tggtggcaag cgcccagtca tcaagcgtca tcagcgtcaa cggtaaacgg gcagaagccg
    50221 taggctgacg gggaggaaaa ggtgtaaaag ccataataga gtcctgagtt gcttaacggc
    50281 gtattaatga ctaatggtaa aagagctatg aggcaatgca agtgctttca ctacgcgatc
    50341 tgtaccttct gcgaggcgac ttccaaaaaa atgaagccct tgaattgttg tgaattaatt
    50401 tcgcgatcgc gatggtgttt actgatattc ccgtaaaaga agtcgaaaaa cacgttacaa
    50461 tagcggggta ctggattttc gtgagacagg aagacgatgg acattaacaa caaagcccgc
    50521 attcattggg catgccgccg tggtatgcgc gaactcgata tttcaatcat gccgtttttc
    50581 gaacatgagt atgacagctt aagcgatgac gaaaaacgca tctttattcg tctgctggaa
    50641 tgtgacgatc cggacctgtt taactggctg atgaatcacg gtaaaccggc cgatgcagaa
    50701 ctggaaatga tggtccgact catccagaca cggaaccggg aacgtggtcc tgtggcaatc
    50761 tgatctgcgc gtctcctggc gcgcacagtg gctttccttg ctgattcatg ggctggttgc
    50821 cgctgttatt ttactcatgc cctggccgct cagttacact ccgttatgga tggtgttact
    50881 ttcgctggtg gtgtttgatt gcgttcgcag ccagcggcgt attaatgctc gccaggggga
    50941 aattcgcctg ttgatggacg ggcgtttgcg ttggcaaggg caggagtgga gcatcgtcaa
    51001 agcgccgtgg atgattaaga gcggcatgat gctgcgttta cgttctgaca gcggtaaacg
    51061 gcaacattta tggctggcag ccgacagcat ggacgaagcc gaatggcggg atttacggcg
    51121 gattttgttg caacaagaga cgcaaagatc aagatgacgg caaagcatat gcgctaagcc
    51181 gtcagtgaga tcaggcgtaa tgctctgcca tttcgttgag gatttgttca caccagctct
    51241 gaatacgctc gtcgctaagg tcatactggt tagtttcgtc cagcgccaga cccacgaaca
    51301 gttgcctgtc agcaatcacc ggtttcgggc tggtaaattc atatccttcc gttggccagt
    51361 agccgacgaa cttcacgcct ttggtagaaa gtttgtcatg cagcatccct agcgcatcga
    51421 ggaaccattc accgtacccg agttgatcgc caagcccata cagcgcaaca attttacctt
    51481 cgaggttcag gtcgtcgagc tgatcccaga cggcttccca gtcttcctgg atttcgccaa
    51541 aatcccaggt cgggataccc agaatgagca catcgtactg ctccattaat ttcggggagt
    51601 cgtccttgag gttatgtaag gtcaccagtt ctgggccgat aatatcgcgg attttttctg
    51661 ccgccatttc ggtgtaacag gtgctggaac cgtaaaaaag acccatattc ataacgtaag
    51721 cttctcgatt ctgctgtggc ttttgcggct agtgtatcag aatcgcttta gtcacgacac
    51781 aataaggcat aatggatcaa atgagtgacc ataaggggcg caagtgaaac agaatctggc
    51841 acgcatcgag cagtttcttg atgctctgtg gctggaaaaa aatctggctg aaaatacgtt
    51901 gaacgcttac cgtcgcgatc tgtcaatgat ggtggagtgg ttgcatcacc gcgggttgac
    51961 gctggcgacg gcgcaaagtg acgatttgca ggcattactg gcagaacggc tggagggcgg
    52021 gtataaagcc accagctcag cgcgtttgct gagtgcagtg cgccgattgt tccagtatct
    52081 ttatcgcgaa aagtttcgtg aagacgatcc cagtgcgcat ctcgcttcac cgaaattgcc
    52141 ccagcgtttg ccaaaagatt taagcgaagc gcaggttgaa cgtttattac aggcaccatt
    52201 aattgatcag ccactggagc tacgcgataa agccatgctt gaagtgttgt atgctaccgg
    52261 gctgcgtgtc tctgaactgg tcgggctgac aatgagtgat atcagcctgc gtcagggcgt
    52321 agtgcgggtc attggtaaag gcaacaaaga gcgactggtg ccgttaggtg aagaggcggt
    52381 ttactggctg gaaacctatc tggaacatgg gcgtccgtgg ctgctgaatg gtgtgtcaat
    52441 tgacgtgtta tttcccagtc agcgtgcgca gcagatgacg cgacagacct tctggcaccg
    52501 tattaaacat tatgccgtgc tggcgggtat cgacagcgaa aagctgtcac cgcatgtgtt
    52561 gcgtcacgct tttgccactc atttattaaa tcatggtgcg gatttacgcg tggtgcagat
    52621 gctactgggc cacagcgatc tctccaccac gcaaatttat acgcatgtcg ctaccgagcg
    52681 tctgcggcaa cttcatcaac agcatcaccc gcgggcgtga tgtctgaaaa gaacgggaag
    52741 atttatgaag aaaggtttta tgttgtttac tttgttagcg gcgttttcag gctttgctca
    52801 ggctgatgac gcggcaattc aacaaacgtt agccaaaatg ggcatcaaaa gcagcgatat
    52861 tcagcccgcg cccgtagctg gcatgaagac agttctgact aacagcggcg tgttgtacat
    52921 caccgatgat ggtaaacata tcattcaggg gccaatgtat gacgttagcg gcacggctcc
    52981 ggtcaatgtc accaataaga tgctgttaaa gcagttgaat gcgcttgaaa aagagatgat
    53041 cgtttataaa gcgccgcagg aaaaacacgt catcaccgtg tttactgata ttacctgtgg
    53101 ttactgccac aaactgcatg agcaaatggc agactataac gcgctgggga tcaccgtgcg
    53161 ttatcttgct ttcccgcgcc aggggctgga cagcgatgca gagaaagaaa tgaaagctat
    53221 ctggtgtgcg aaagataaaa acaaagcgtt tgatgatgtg atggcaggta aaagcgtcgc
    53281 accagccagc tgcgacgtgg atattgccga ccattacgca cttggcgtcc agcttggcgt
    53341 tagcggtact ccggcagttg tgctgagcaa tggcacactt gttccgggtt accagccgcc
    53401 gaaagacatg aaagaattcc tcgacgaaca ccaaaaaatg accagcggta aataattcgc
    53461 gtgaaacaac agatacaact tcgtcgccgt gcagtcgatg aaacggcaga cttgcccgct
    53521 gaattgcctc ccttgctgcg ccgtttatac gccagccggg gcgtgcgcag tgcgcaagaa
    53581 ctggaacgca gtgttaaagg tatgttgccc tggcagcaac tgagcggcgt cgaaaaggcc
    53641 gttgagatcc tttacaacgc ttttcgcgaa ggaacgcgga ttattgtggt cggcgatttt
    53701 gacgccgacg gcgccaccag cacggctcta agcgtgctgg cgatgcgctc gcttggttgc
    53761 agcaatatcg actatctggt accaaaccgt ttcgaagacg gttacggctt aagcccggaa
    53821 gtagtcgatc aggcccatgc ccgtggcgcg cagttaattg tcacggtgga taacggtatt
    53881 tcctcccatg cgggcgttga acacgctcgc tcgttgggca ttccggttat tgttaccgat
    53941 caccatttgc cgggcgaaac attacccgca gcggaagcga tcattaaccc taacttgcgc
    54001 gactgtaatt tcccgtcgaa atcactggca ggcgtgggtg tggcgtttta tctgatgctg
    54061 gcgctgcgca cctttttgcg cgatcagggc tggtttgatg agcgcggcat cgcaattcct
    54121 aacctggcag aactgctgga tctggtagcg ctggggacag tagcggacgt cgtgccgctg
    54181 gacgctaata atcgcattct gacctggcag gggatgagtc gcatccgtgc cggaaagtgc
    54241 cgtccaggga ttaaagcgct gctggaagtg gcaaatcgcg atgcacaaaa actcgccgcc
    54301 agcgatttag gttttgcgct gggaccgcgt ctcaatgctg ccgggcgact ggatgatatg
    54361 tccgttggtg tggcgctgtt gctgtgcgac aacatcggcg aagcgcgcgt gctggcaaat
    54421 gaactcgatg cgctaaacca gacgcgaaaa gagatcgaac aaggaatgca ggttgaagcc
    54481 ctgaccctgt gcgagaaact ggagcgcagc cgtgacacgc tacccggcgg gctggcaatg
    54541 tatcaccccg aatggcatca gggcgttgtc ggtattctgg cttcgcgcat caaagagcgt
    54601 tttcaccgtc cggttatcgc ctttgcgcca gcaggtgacg gtacgctgaa aggttccggt
    54661 cgctccattc aggggctgca tatgcgtgat gcgctggagc gattagacac actctacccc
    54721 ggcatgatgc tcaagtttgg cggtcatgcg atggcggcgg gtttgtcgct ggaagaggat
    54781 aaattcgaac tctttcaaca acggtttggc gaactggtta ctgagtggct ggacccttcg
    54841 ctattgcaag gcgaagtggt gtcagacggt ccgttaagcc cggccgaaat gaccatggaa
    54901 gtggcgcagc tgctgcgcga tgctggcccg tgggggcaga tgttcccgga gccgctgttt
    54961 gacggtcatt tccgtctgct gcaacagcgg ctggtgggcg aacgtcattt gaaggtgatg
    55021 gtcgaaccgg tcggcggcgg tccactgctg gatggtattg cttttaatgt cgataccgct
    55081 ctctggccgg ataacggcgt gcgcgaagtg caactggctt acaagctcga tatcaacgag
    55141 tttcgcggca accgcagcct gcaaattatc atcgacaata tctggccaat ttagcgtcat
    55201 cttctctata aaaaagagcg tggattgggt acaatcccgc tcttatcacc gcattttgac
    55261 tagctcaata aaagaaatca gaccatgttt gaaattaatc cggtaaataa tcgcattcag
    55321 gacctcacgg aacgctccga cgttcttagg gggtatcttt gactacgacg ccaagaaaga
    55381 gcgtctggaa gaagtaaacg ccgagctgga acagccggat gtctggaacg aacccgaacg
    55441 cgcacaggcg ctgggtaaag agcgttcctc cctcgaagcc gttgtcgaca ccctcgatca
    55501 aatgaaacag gggctggaag atgtttctgg tctgctggaa ctggctgtag aagctgacga
    55561 cgaagaaacc tttaacgaag ccgttgctga actcgacgcc ctggaagaaa aactggcgca
    55621 gcttgagttc cgccgtatgt tctctggcga atatgacagc gccgactgct acctcgatat
    55681 tcaggcgggg tctggcggta cggaagcaca ggactgggcg agcatgcttg agcgtatgta
    55741 tctgcgctgg gcagaatcgc gtggtttcaa aactgaaatc atcgaagagt cggaaggtga
    55801 agtggcgggt attaaatccg tgacgatcaa aatctccggc gattacgctt acggctggct
    55861 gcgtacagaa accggcgttc accgcctggt gcgtaagagc ccgtttgact ccggcggtcg
    55921 tcgccacacg tcgttcagct ccgcgtttgt ttatccggaa gttgatgatg atattgatat
    55981 cgaaatcaac ccggcggatt tgcgcattga cgtttatcgc gcgtccggcg cgggcggtca
    56041 gcacgttaac cgtaccgaat ctgcggtgcg tattactcac atcccaaccg ggatcgtgac
    56101 ccagtgccag aacgaccgtt cccagcacaa gaacaaagac caggccatga agcagatgaa
    56161 agcgaagctt tatgaactgg agatgcagaa gaaaaatgct gagaaacagg cgatggaaga
    56221 taacaaatct gacatcggct ggggcagcca gattcgttct tatgtccttg atgactcccg
    56281 cattaaagat ctgcgcaccg gggtagaaac ccgcaacacg caggccgtgc tggacggcag
    56341 cctggatcaa tttatcgaag caagtttgaa agcagggtta tgaggaacca acatgtctga
    56401 acaacacgca cagggcgctg acgcggtagt cgatcttaac aatgaactga aaacgcgtcg
    56461 tgagaagctg gcgaacctgc gcgagcaggg gattgccttc ccgaacgatt tccgtcgcga
    56521 tcatacctct gaccaattgc acgcagaatt cgacggtaaa gaaaacgaag aactggaagc
    56581 gctgaacatc gaagtcgctg ttgctggccg catgatgacc cgccgtatta tgggtaaagc
    56641 gtctttcgtt accctgcagg atgtgggtgg ccgcattcaa ctgtacgttg cccgtgacga
    56701 tctgccggaa ggcgtttaca acgagcagtt caaaaaatgg gacctcggcg acatcctcgg
    56761 cgcgaaaggt aaactgttca aaaccaaaac cggcgaactg tctatccact gtaccgagct
    56821 gcgtctgctg accaaagcac tgcgtccgct gccggataaa ttccacggct tgcaggatca
    56881 ggaagcgcgc tatcgtcagc gttatctgga tctcatctct aacgatgaat cccgtaacac
    56941 ctttaaagtg cgctcgcaga tcctctctgg tattcgccag ttcatggtga accgcggctt
    57001 tatggaagtt gaaacgccga tgatgcaggt gatcccaggc ggtgccgctg cgcgtccgtt
    57061 tatcacccac cataatgcgc tggatctcga catgtacctg cgtatcgcgc cggaactgta
    57121 cctcaagcgt ctggtggtcg gtggcttcga gcgtgtattc gaaatcaacc gtaacttccg
    57181 taacgaaggt atctccgtac gtcataaccc agagttcacc atgatggaac tctacatggc
    57241 ttacgcagat tacaaagatc tgatcgagct gaccgaatcg ctgttccgta ctctggcaca
    57301 ggatattctc ggtaagacgg aagtgaccta cggcgacgtg acgctggact tcggtaaacc
    57361 gttcgaaaaa ctgaccatgc atgaagcgat caagaaatat cgcccggaaa ccgacatggc
    57421 ggatctggat aacttcgact ctgcgaaagc gattgctgaa tctatcggta tccacgttga
    57481 gaagagctgg ggtctgggcc gtatcgttac cgagatcttc gaagaagtgg cagaagcaca
    57541 tctgattcag ccgaccttca ttactgaata tccggcagaa gtttctccgc tggcgcgtcg
    57601 taacgacatt aacccggaaa tcacagatcg ctttgagttc ttcatcggtg gtcgtgaaat
    57661 cggtaacggc tttagcgagc tgaatgacgc ggaagatcag gcgcagcgct tcttggatca
    57721 ggttgccgcg aaagatgcag gtgacgacga agcgatgttc tacgatgaag attacgtcac
    57781 cgcactggaa cacggcttac cgccgacagc aggtctggga attggtatcg accgtatggt
    57841 aatgctgttc accaacagcc ataccatccg cgacgttatt ctgttcccgg cgatgcgtcc
    57901 ggtaaaataa gcattacgtt atgctcgcaa ccccggcaaa tgtcggggtt tttttattta
    57961 agctgggtaa atgcagataa tcgttttctg gcttcgcgat ttgtcgcctg catcaccatc
    58021 cacggactga acgcccacgg tgtggcatca ataccgtgta atacatctgc taaatcacac
    58081 cattgataat ccatcacttc atcatcattg atctgtaacg cactggtggt gcgtgcggca
    58141 aataccggac acacttcatt ttccacaatg ccattcggat cggtggcgcg atagcgaaag
    58201 tcaggataga tagattcagg aggcgtaatt tccacgccaa gctcataacg gcaacggcgg
    58261 atcaccgcgt cttcgttgct ttctcccagt tgtgggtgcc cacaaaccga gttagtccac
    58321 acgccaggcc acgctttttt gctcagtgcg cggcgggtaa ctaataattg tcctttggca
    58381 ttaaacagcc aactggagaa cgcgagatgt aagcgggtgt ctgccgtgtg tgcggcatac
    58441 ttttccagcg tacccgtggg aactccctgt gcattcaata aaatgacgtg ttccgtttgc
    58501 ataatttctc acatgtaatt ctgatcactc atcattatag ataattgaag agtgaaatga
    58561 ttaaccaagt gagcgtttat cgacaaccgc ccgttttgag cggatgccga caggtaaaaa
    58621 ccatttaaaa aagtagcatc atatatttga agcgactttc aatggccatt gcaacacagt
    58681 cagaaatgac aggaatagag agagtaaaaa gcaacagcag actgaatata gcgcgcatta
    58741 aaaaattcat attattctcc atgctcattt ttcttcagct tgcgcatcag aagccacata
    58801 cgtactgtcc tgacttttaa atctttatca gagacggatt ccttcaccag gtcagcatga
    58861 tgctggtagc cattaaagaa gacattcagc acaacggcgc taagggttgc gagcataatg
    58921 ccgctatgca gcaacggttg cagtacggcc ggtaacttag aaaagaaatc gtgagagagc
    58981 gtcggagtca tgccaacgcc gagactgatc gccacaatat agaggttgta acggttggtg
    59041 gtgtagttac agcgcgacag aattcgaatc cctgtcgcca gtaccatgcc gaacatcacc
    59101 agtccagcgc cgcccagcac aaattgcgga atggaggcta ccagcaccgc cattttgggc
    59161 accatgccaa acaggattaa tataattccc gaagaaatac acacccagcg gctatgaacg
    59221 cgcgtcacgc taaccaggcc aacgttttga gaaaatgacg tgtgggggaa gctgttaaac
    59281 gttccgccta tcattgtccc tacgccatcg acacgcagcc cgcgaataat atcgtgtgaa
    59341 gagagtttac gaccgactat ttcacccagt gccaggaaca tccccatcga ctcgataaac
    59401 acgatgatta acacggcagt catggtcaga atggaaacgg gatcgaaaat cggcatacca
    59461 aacgacatcg gggtgacaat cgcaaaccac gaggcatcat gtagcccgga taaattgact
    59521 tcattcatca tccacgaaag taaaaagcca aatacaatcc ccagtaatac ggcgacgttg
    59581 gacataaatc ctttcgcata gcgagtaatg agctagactg gccccctgaa tctccag
//
LOCUS       DAJVTL010000007        57005 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.007, whole genome shotgun sequence.
ACCESSION   DAJVTL010000007 DAJVTL010000000
VERSION     DAJVTL010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 57005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 57005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..57005
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.007"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            38..739
                     /locus_tag="OQQ26_000409"
     CDS             38..739
                     /locus_tag="OQQ26_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCS1856001.1"
                     /translation="MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEG
                     EEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGA
                     PLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLR
                     CTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRT
                     INDYGAETPQLNCKS"
     gene            764..3364
                     /locus_tag="OQQ26_000410"
     CDS             764..3364
                     /locus_tag="OQQ26_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706863.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein"
                     /protein_id="HCS1856002.1"
                     /translation="MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFF
                     KDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTE
                     SLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR
                     GYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNS
                     TWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNM
                     LPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSLSGDLLVE
                     IKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGP
                     WGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLY
                     AKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFY
                     TKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGGSWNY
                     SKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHITQNLG
                     LTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNY
                     ALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSY
                     RENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRF
                     GAIATLDGVQTNSGIIDDDGSLYMSGLPAQGAITVRWGEAPDQICHISYQLTEQQINS
                     AITRMDAICR"
     gene            3355..4425
                     /locus_tag="OQQ26_000411"
     CDS             3355..4425
                     /locus_tag="OQQ26_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1856003.1"
                     /translation="MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYI
                     GVNFGVKTLEEEENTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVY
                     LGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASG
                     NSGSFSLKILQPFVGSVVIPPMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSL
                     GSCSVDAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNEGLVNVNLSL
                     TATSDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVS
                     TTGVPPETGRFEATATVRINFD"
     gene            4437..4979
                     /locus_tag="OQQ26_000412"
     CDS             4437..4979
                     /locus_tag="OQQ26_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1856004.1"
                     /translation="MKKKTIYQCVILFFSLLNIHVGMAGPEQVSMHIYGNVVDQGCDV
                     ATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAP
                     TLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKST
                     KAGATGGNATAVLYFDLVYQ"
     gene            4987..5502
                     /locus_tag="OQQ26_000413"
     CDS             4987..5502
                     /locus_tag="OQQ26_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415463.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1856005.1"
                     /translation="MLKRIIWILFLLGLTGGCELFAHDGTVNISGSFRRNTCVLAQDS
                     KQINVQLGDVSLTRFFHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVKSEMLSI
                     ESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKV
                     NASATFVLHYD"
     gene            5468..6204
                     /locus_tag="OQQ26_000414"
                     /pseudo
     CDS             5468..6204
                     /locus_tag="OQQ26_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706867.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
     gene            6315..7325
                     /gene="pyrD"
                     /locus_tag="OQQ26_000415"
     CDS             6315..7325
                     /gene="pyrD"
                     /locus_tag="OQQ26_000415"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HCS1856006.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
                     KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
                     KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
                     APDLSEDELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
                     EIIRRLSQELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            7499..8041
                     /gene="zapC"
                     /locus_tag="OQQ26_000416"
     CDS             7499..8041
                     /gene="zapC"
                     /locus_tag="OQQ26_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HCS1856007.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF
                     SPAGFCVDDAALYFSFEEKCRDFNLSKDQKAELVLNALVAIRYLKPQMPKSWHFVSHG
                     EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
                     MNDRLKPQVNVDSFSLEQAV"
     gene            complement(8038..9147)
                     /gene="ycbX"
                     /locus_tag="OQQ26_000417"
     CDS             complement(8038..9147)
                     /gene="ycbX"
                     /locus_tag="OQQ26_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein YcbX"
                     /protein_id="HCS1856008.1"
                     /translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
                     FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
                     PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
                     RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
                     KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
                     ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
                     LLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLTR"
     gene            9391..11499
                     /gene="rlmKL"
                     /locus_tag="OQQ26_000418"
     CDS             9391..11499
                     /gene="rlmKL"
                     /locus_tag="OQQ26_000418"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HCS1856009.1"
                     /translation="MNSLFASTARGLEELLKTELENLGAVECLVVQGGVHFKGDTRLV
                     YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPSATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
                     LRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL
                     HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
                     LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
                     NQFGGWNLSLFSALPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
                     EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTI
                     DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA
                     HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT
                     VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
                     MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
                     LSQDFARNRQIHNCWLITAA"
     gene            11511..13418
                     /locus_tag="OQQ26_000419"
     CDS             11511..13418
                     /locus_tag="OQQ26_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1856010.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERICLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
                     DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQL
                     VKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRVLSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKSEEAAVPKAETVKRSSSKLSYKL
                     QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER
                     WEYLEALKNGG"
     gene            13548..14801
                     /gene="pqiA"
                     /locus_tag="OQQ26_000420"
     CDS             13548..14801
                     /gene="pqiA"
                     /locus_tag="OQQ26_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HCS1856011.1"
                     /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPSVLFSEDYASLGTF
                     FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
                     KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
                     QGLRSCSCCTAILPADEPVCPRCGTKGYVRRRNSLQWTLVLLVTSIMLYLPANILPIM
                     VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDRQPESEHEES"
     gene            14806..16446
                     /gene="pqiB"
                     /locus_tag="OQQ26_000421"
     CDS             14806..16446
                     /gene="pqiB"
                     /locus_tag="OQQ26_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706874.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HCS1856012.1"
                     /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
                     VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
                     VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
                     IPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
                     PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT
                     MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            16443..17006
                     /gene="pqiC"
                     /locus_tag="OQQ26_000422"
     CDS             16443..17006
                     /gene="pqiC"
                     /locus_tag="OQQ26_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HCS1856013.1"
                     /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGKQSTASQGNR
                     LLWVEQVTVPDYLAGNGMVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
                     VVASQPLGSAQDMLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
                     YDEMVKVLASVWSQEAASIAQEIKRLP"
     gene            17262..17429
                     /gene="rmf"
                     /locus_tag="OQQ26_000423"
     CDS             17262..17429
                     /gene="rmf"
                     /locus_tag="OQQ26_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HCS1856014.1"
                     /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW
                     REAMADRVVMA"
     gene            complement(17499..18017)
                     /gene="fabA"
                     /locus_tag="OQQ26_000424"
     CDS             complement(17499..18017)
                     /gene="fabA"
                     /locus_tag="OQQ26_000424"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HCS1856015.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
                     LKVGLFQDTSAF"
     gene            complement(18086..19846)
                     /locus_tag="OQQ26_000425"
     CDS             complement(18086..19846)
                     /locus_tag="OQQ26_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HCS1856016.1"
                     /translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF
                     ALEQLLHTRASSSFMLAKAPEESEYLNLIADAAHTLQSDAGQLVGGHYEVSGHSIRLR
                     HAVNADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
                     LLAQPLLWMRLKNIVNRGRFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPGLSEQAIYSEFEDTLQIVDAESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAA
                     RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
                     ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
                     HLSLHSELMKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
                     QEGRHRFPWPLRWLNWFIPN"
     gene            20032..20484
                     /gene="matP"
                     /locus_tag="OQQ26_000426"
     CDS             20032..20484
                     /gene="matP"
                     /locus_tag="OQQ26_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HCS1856017.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
                     LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE"
     gene            complement(20560..21615)
                     /gene="ompA"
                     /locus_tag="OQQ26_000427"
     CDS             complement(20560..21615)
                     /gene="ompA"
                     /locus_tag="OQQ26_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HCS1856018.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
                     IDNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA
                     KLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKNHDTGVSPVFAGGVEWAITPE
                     IATRLEYQWTNNIGDAHTIGTRPDNGLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTK
                     HFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQ
                     GLSERRAQSVVDYLISKGIPADKISARGIGESNPVTGNTCDNVKQRAALIDCLAPDRR
                     VEIEVKGIKDVVTQPQA"
     gene            complement(21972..22481)
                     /gene="sulA"
                     /locus_tag="OQQ26_000428"
     CDS             complement(21972..22481)
                     /gene="sulA"
                     /locus_tag="OQQ26_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HCS1856019.1"
                     /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
                     MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLTPCHTVES
                     MVRALRTGNYSVVIGWVADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG
                     LKIHSNLYH"
     gene            22700..23329
                     /gene="sxy"
                     /locus_tag="OQQ26_000429"
     CDS             22700..23329
                     /gene="sxy"
                     /locus_tag="OQQ26_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
                     /protein_id="HCS1856020.1"
                     /translation="MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS
                     DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS
                     LDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
                     SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE"
     gene            complement(23292..25454)
                     /gene="yccS"
                     /locus_tag="OQQ26_000430"
     CDS             complement(23292..25454)
                     /gene="yccS"
                     /locus_tag="OQQ26_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HCS1856021.1"
                     /translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
                     IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
                     SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIG
                     HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGQLMATLN
                     QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
                     FQRLMSMQGQACQQLSRCILLRQPYQHDLHFERAFTHIDAALERMRDNGAPADLLKTL
                     GFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESA
                     LFRHAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLI
                     GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
                     FEVALPRVIDTLIGCAIAWAAVSYIWPDWKFRNLPRMLERATEANCRYLDAILEQYHQ
                     GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTTQIREAAFRLLCLNHTFTSYIS
                     ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNQALAGLKQRMQQLEPRAD
                     SKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA"
     gene            complement(25464..25910)
                     /locus_tag="OQQ26_000431"
     CDS             complement(25464..25910)
                     /locus_tag="OQQ26_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HCS1856022.1"
                     /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
                     ISIIGIPVGIANFKIAAIALWPVGRRVASVETAQAAREANARRRFE"
     gene            26033..28087
                     /gene="helD"
                     /locus_tag="OQQ26_000432"
     CDS             26033..28087
                     /gene="helD"
                     /locus_tag="OQQ26_000432"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HCS1856023.1"
                     /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
                     LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALLALPLPVNRLEEFDNCREAWRKCQ
                     AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA
                     GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH
                     ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ
                     WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM
                     PPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL
                     AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYHFNSRI
                     GKVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL
                     ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES
                     IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR
                     KP"
     gene            complement(28119..28577)
                     /gene="mgsA"
                     /locus_tag="OQQ26_000433"
     CDS             complement(28119..28577)
                     /gene="mgsA"
                     /locus_tag="OQQ26_000433"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HCS1856024.1"
                     /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA
                     TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
     gene            complement(28673..29335)
                     /locus_tag="OQQ26_000434"
     CDS             complement(28673..29335)
                     /locus_tag="OQQ26_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HCS1856025.1"
                     /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
                     RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
                     NEQEANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
                     PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
                     SS"
     gene            29508..29921
                     /locus_tag="OQQ26_000435"
     CDS             29508..29921
                     /locus_tag="OQQ26_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HCS1856026.1"
                     /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI
                     PVSPKVADKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL
                     GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
     gene            complement(29966..30283)
                     /gene="hspQ"
                     /locus_tag="OQQ26_000436"
     CDS             complement(29966..30283)
                     /gene="hspQ"
                     /locus_tag="OQQ26_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HCS1856027.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND
                     ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR
                     LRN"
     gene            complement(30341..31531)
                     /gene="rlmI"
                     /locus_tag="OQQ26_000437"
     CDS             complement(30341..31531)
                     /gene="rlmI"
                     /locus_tag="OQQ26_000437"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HCS1856028.1"
                     /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD
                     HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
                     RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRTALISALQTLYPECAIYDRSDVT
                     VRKKEGMELTQGLVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY
                     VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
                     RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
                     LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
                     CRVM"
     gene            31626..31904
                     /gene="yccX"
                     /locus_tag="OQQ26_000438"
     CDS             31626..31904
                     /gene="yccX"
                     /locus_tag="OQQ26_000438"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HCS1856029.1"
                     /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
                     EMVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSEELTDFRIR"
     gene            complement(31901..32230)
                     /gene="tusE"
                     /locus_tag="OQQ26_000439"
     CDS             complement(31901..32230)
                     /gene="tusE"
                     /locus_tag="OQQ26_000439"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HCS1856030.1"
                     /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW
                     EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(32321..32980)
                     /gene="yccA"
                     /locus_tag="OQQ26_000440"
     CDS             complement(32321..32980)
                     /gene="yccA"
                     /locus_tag="OQQ26_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HCS1856031.1"
                     /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
                     GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            complement(33187..33274)
                     /locus_tag="OQQ26_000441"
     tRNA            complement(33187..33274)
                     /locus_tag="OQQ26_000441"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33238..33240),aa:Ser,seq:tga)
     gene            33701..34819
                     /gene="hyaA"
                     /locus_tag="OQQ26_000442"
     CDS             33701..34819
                     /gene="hyaA"
                     /locus_tag="OQQ26_000442"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 small subunit"
                     /protein_id="HCS1856032.1"
                     /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
                     ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLIFLDYDDTLMAAAGTQAE
                     EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
                     ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
                     RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
                     STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
                     VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA"
     gene            34816..36609
                     /gene="hyaB"
                     /locus_tag="OQQ26_000443"
     CDS             34816..36609
                     /gene="hyaB"
                     /locus_tag="OQQ26_000443"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
                     /protein_id="HCS1856033.1"
                     /translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT
                     NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN
                     ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP
                     GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK
                     IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI
                     PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNV
                     LPVDLVDPQQVQEFIDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ
                     ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG
                     RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP
                     RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI
                     LRTLHSFDPCLACSTHVLGDDGSELISVQVR"
     gene            36628..37335
                     /gene="hyaC"
                     /locus_tag="OQQ26_000444"
     CDS             36628..37335
                     /gene="hyaC"
                     /locus_tag="OQQ26_000444"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HCS1856034.1"
                     /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
                     SVSGEATYLFYMGYIRLIHFSAGMIFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
                     QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
                     APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMV
                     NGYRSHKFGKISNKERS"
     gene            37332..37919
                     /locus_tag="OQQ26_000445"
     CDS             37332..37919
                     /locus_tag="OQQ26_000445"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HCS1856035.1"
                     /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
                     GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLPAAEQSALVQLAAWGIVP
                     QPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
     gene            37916..38314
                     /gene="hyaE"
                     /locus_tag="OQQ26_000446"
     CDS             37916..38314
                     /gene="hyaE"
                     /locus_tag="OQQ26_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HCS1856036.1"
                     /translation="MSNNTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
                     PKRTPEVSDNPVMIGELLLEFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGN
                     YRGVLNGIHPWAELINLMRGLVEPQQERAS"
     gene            38311..39168
                     /locus_tag="OQQ26_000447"
     CDS             38311..39168
                     /locus_tag="OQQ26_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HCS1856037.1"
                     /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCT
                     HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
                     DDSESEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
                     IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG
                     YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC
                     QWLAEAAPT"
     gene            39302..40846
                     /gene="appC"
                     /locus_tag="OQQ26_000448"
     CDS             39302..40846
                     /gene="appC"
                     /locus_tag="OQQ26_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HCS1856038.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
                     KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALM
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
                     IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGGMFIMAISAWYLLRGRERDVALR
                     SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
                     QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
                     NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
                     MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
                     PTQQQG"
     gene            40858..41994
                     /gene="appB"
                     /locus_tag="OQQ26_000449"
     CDS             40858..41994
                     /gene="appB"
                     /locus_tag="OQQ26_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HCS1856039.1"
                     /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
                     ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
                     AFDYRGKIADARWRKMWDAGLGIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
                     FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLA
                     GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
                     LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL
                     TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY"
     gene            42007..42099
                     /gene="cbdX"
                     /locus_tag="OQQ26_000450"
     CDS             42007..42099
                     /gene="cbdX"
                     /locus_tag="OQQ26_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HCS1856040.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS"
     gene            42175..43473
                     /gene="appA"
                     /locus_tag="OQQ26_000451"
     CDS             42175..43473
                     /gene="appA"
                     /locus_tag="OQQ26_000451"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acid phosphatase/4-phytase"
                     /protein_id="HCS1856041.1"
                     /translation="MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAP
                     TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQS
                     GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA
                     NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLSLNREKQDESCSLTQALPS
                     ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
                     YLLQRTPEVARSRATPLLELIMTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
                     ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
                     PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
     gene            complement(43593..45773)
                     /gene="etk"
                     /locus_tag="OQQ26_000452"
     CDS             complement(43593..45773)
                     /gene="etk"
                     /locus_tag="OQQ26_000452"
                     /EC_number="2.7.10.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HCS1856042.1"
                     /translation="MTTKNMNTPLGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI
                     AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK
                     TIAELNLRDMVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN
                     GHYTLQGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF
                     TVSERSKESGMLELTMTGDDPQLITRILNNIANNYLQQNIARQAAQDSQSLEFLQRQL
                     PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY
                     KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR
                     QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR
                     RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA
                     DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI
                     DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL
                     LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS
                     LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE"
     gene            complement(45793..46239)
                     /gene="etp"
                     /locus_tag="OQQ26_000453"
                     /gene_synonym="yccY"
     CDS             complement(45793..46239)
                     /gene="etp"
                     /locus_tag="OQQ26_000453"
                     /gene_synonym="yccY"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase Etp"
                     /protein_id="HCS1856043.1"
                     /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL
                     VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR
                     GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR"
     gene            complement(46227..47366)
                     /locus_tag="OQQ26_000454"
     CDS             complement(46227..47366)
                     /locus_tag="OQQ26_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HCS1856044.1"
                     /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQY
                     DLDKMVNINPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
                     LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
                     VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
                     GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
                     TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
                     EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
     gene            complement(47412..49508)
                     /locus_tag="OQQ26_000455"
     CDS             complement(47412..49508)
                     /locus_tag="OQQ26_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HCS1856045.1"
                     /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
                     MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
                     QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
                     WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
                     RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
                     FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMS
                     GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
                     TAPGQSEQLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
                     MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
                     NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDANWALGVDVNYVKQRDWD
                     NMMRFTDYSTPTGFVTAYWNPPTLNGILMKLSVGQYLAKDKGATIDVAKRFDSGVAVG
                     VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
                     YQLYPMTAEREVPVGQ"
     gene            complement(49508..50254)
                     /locus_tag="OQQ26_000456"
     CDS             complement(49508..50254)
                     /locus_tag="OQQ26_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HCS1856046.1"
                     /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVEN
                     VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS
                     VRQQLLNLNITGRLPVKLAPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
                     QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL
                     WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
     gene            complement(50251..50895)
                     /gene="gfcB"
                     /locus_tag="OQQ26_000457"
     CDS             complement(50251..50895)
                     /gene="gfcB"
                     /locus_tag="OQQ26_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein GfcB"
                     /protein_id="HCS1856047.1"
                     /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI
                     QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
                     EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV
                     LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP"
     gene            complement(51002..51307)
                     /locus_tag="OQQ26_000458"
     CDS             complement(51002..51307)
                     /locus_tag="OQQ26_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856048.1"
                     /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG
                     ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSDDGGSHNTSTTTSTTR"
     gene            complement(51749..51961)
                     /gene="cspH"
                     /locus_tag="OQQ26_000459"
     CDS             complement(51749..51961)
                     /gene="cspH"
                     /locus_tag="OQQ26_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspH"
                     /protein_id="HCS1856049.1"
                     /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
                     LIPGLRVEFCRVNGLRGPTAANVYLS"
     gene            52247..52459
                     /gene="cspG"
                     /locus_tag="OQQ26_000460"
     CDS             52247..52459
                     /gene="cspG"
                     /locus_tag="OQQ26_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspG"
                     /protein_id="HCS1856050.1"
                     /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT
                     LNENQKVEFSIEQGQRGPAAANVVTL"
     gene            52470..52658
                     /locus_tag="OQQ26_000461"
     CDS             52470..52658
                     /locus_tag="OQQ26_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HCS1856051.1"
                     /translation="MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITF
                     DNVALQIRTDHALLDFTK"
     gene            52633..52863
                     /gene="ymcE"
                     /locus_tag="OQQ26_000462"
     CDS             52633..52863
                     /gene="ymcE"
                     /locus_tag="OQQ26_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YmcE"
                     /protein_id="HCS1856052.1"
                     /translation="MHCWISQNNIRLPRGAFFISVLFFFNAVCIVSDNLLIIESFGEM
                     AYNISYLTRVPGTNTLLACCCLLRPEEVNSEY"
     gene            52853..53026
                     /locus_tag="OQQ26_000463"
     CDS             52853..53026
                     /locus_tag="OQQ26_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HCS1856053.1"
                     /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM
                     TGLESYDVKIKIM"
     gene            complement(53075..54146)
                     /locus_tag="OQQ26_000464"
                     /pseudo
     CDS             complement(53075..54146)
                     /locus_tag="OQQ26_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
     gene            complement(54218..56962)
                     /gene="torS"
                     /locus_tag="OQQ26_000465"
     CDS             complement(54218..56962)
                     /gene="torS"
                     /locus_tag="OQQ26_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415513.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HCS1856054.1"
                     /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA
                     LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ
                     GFDTTAIEQQEQEISRSLRQQGEMVGRRLQLRQQQRQLSQQIVAAADEIARLAQGQAN
                     NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM
                     NLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALF
                     QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL
                     LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG
                     RLMDAFRSSVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA
                     MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG
                     GKNVSVSDEPFEPRPLLESTLQLMSGRVKGHPIRLATAIADDVPSALMGDPRRIRQVI
                     TNLLSNALRFTDEGHIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG
                     GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATGPVPKTANQAVRLDGL
                     RLLLIEDNPLTQRITVEMLNTSGAQVVAIGNAAQALETLQNSEPFAAALVDFDLPDID
                     GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL
                     QLQANNDLPLDVSQLNEDAQLMGTEKIHEWLALFKQHALPLLDEIDIARASQDSEKIK
                     RAAHQLKSSCSSLGMCSASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI
                     "
BASE COUNT        14126 a        14049 c        14883 g        13947 t
ORIGIN      
        1 tggaggggat atttatattt tttaagagtg actatttatg aaaacttgca taacaaaggg
       61 aattgtgacc gtaagtttaa cggcaatatt actcagctgc tcatccgcat gggcggcagg
      121 taaaggcggg attggacttg cagcaacacg tcttgtttat tcagaaggtg aagagcaaat
      181 ttcactgggt gtacgtaaca ccagtccgga tgttccttat cttattcagt catgggtgat
      241 gaccccagat aataaaaaat cagcagattt tattattaca ccaccgctat ttgtgctgaa
      301 tccggctaat gagaatctgt tacgcattat gtacattggt gcgccgttgg cgaaagacag
      361 agaaaccctt ttcttcacta gcgtacgggc agtcccttca acaacgaagc gggaagaggg
      421 aaataccctg aagattgcca cacaaagcgt catcaaactt ttctggcgac caaaaggttt
      481 agcgtatccc ttaggtgagg ctccggcgaa actgcgttgc acttcgtcag ctgacatggt
      541 tacggtcagt aacccaacac cttatttcat taccctgaca gacctgaaaa tagggggaaa
      601 ggtagttaaa aatcaaatga tttccccctt tgataaatac caattctctc tgccaaaggg
      661 tgccaaaaat agcagcgtaa cgtatcgaac catcaatgat tacggggcgg aaacgccgca
      721 actcaactgt aaatcgtaag ccgtcttcag ttaagagagc gagatgtata gaactcatcg
      781 acaacacagc ctgttaagct ctggtggagt gccatcgttt attggtgggc tggtggtgtt
      841 tgtgtcggca gcgttcaatg cacaagctga aacctggttc gatcctgctt ttttcaaaga
      901 tgatccctca atggtggccg atttgtctcg tttcgaaaaa ggacaaaaaa taacgccagg
      961 ggtttatcgt gttgatattg ttctgaatca gacaattgta gatacgcgca acgtcaattt
     1021 tgttgagata acgccagaga aggggattgc cgcctgtttg acgactgaaa gcctggatgc
     1081 aatgggtgtt aatactgatg cgtttccggc ttttaaacaa ctggacaaac aagcgtgtgt
     1141 gccattggcg gagattattc cggatgccag cgtaacgttt aatgtgaata aactccgtct
     1201 ggaaatttca gtaccgcaaa tcgccatcaa aagtaatgcc cgtggttatg tcccccctga
     1261 acgttgggat gaagggatca acgcgctatt actgggatat tcgtttagcg gggctaacag
     1321 tattcatagc agcgcagaca gtgattctgg cgacagctat tttctgaatt taaacagtgg
     1381 cgttaattta ggcccatgga gattgcgcaa caattcaaca tggagtcgca gtagtggcca
     1441 aaccgcagaa tggaagaatc tcagcagcta tttgcagcgg gcggttattc cactaaaagg
     1501 cgaactgacc gtaggtgatg attatactgc aggcgatttt ttcgatagtg tcagctttcg
     1561 tggtgtgcag ctggcgtcag atgacaacat gctgccagac agcctgaaag ggtttgcgcc
     1621 tgtggtgcgt ggtatcgcca aaagcaatgc ccagataacg attaagcaaa atggttacac
     1681 catttaccaa acttatgtat cgcctggtgc ttttgaaatt agtgatctct attccacgtc
     1741 gttgagcggt gatttgttag ttgaaatcaa agaagcggac ggcagcgtca atagctacag
     1801 cgtaccgttt tccagcgtgc cattactcca gcgtcagggg cgaatcaaat acgcggtgac
     1861 actggcgaaa tacagaacca atagtaatga acagcaggag agcaaatttg cccaggccac
     1921 gttgcagtgg ggcggaccgt ggggaacgac atggtatggt ggtggacaat atgctgaata
     1981 ttaccgtgcc gccatgtttg gtctgggatt taaccttggc gatttcggag caatttcgtt
     2041 cgatgcgacc caggcgaaga gtacgctggc agaccaaagc gaacataaag gtcagtcata
     2101 tcgttttctg tatgccaaaa cgctcaacca attgggcact aattttcaat tgatgggcta
     2161 tcgctattcg acgtcgggtt tctacaccct ttccgacacc atgtataaac atatggatgg
     2221 ctacgaattt aatgacggtg atgatgaaga tacgccgatg tggtcgcgtt attacaattt
     2281 gttttacacc aaacgtggca aactgcaggt caatatctcc cagcaattag gcgagtacgg
     2341 ttcgttttat ttaagtggta gccagcaaac ttactggcat accgatcaac aggatcggct
     2401 attacagttt ggctacaaca cgcaaattaa agatctctcg ctggggggtt cctggaacta
     2461 cagtaagtcc cgtggtcaac ctgatgctga tcaggtgttt gcactaaatt tttccctgcc
     2521 gctcaatctg ttgctcccca gaagtaatga tagctatacc aggaaaaaaa attacgcctg
     2581 gatgacctct aacaccagta tcgataacga agggcacatt acacaaaacc tgggtttaac
     2641 ggagacacta ctcgatgacg gtaacctgag ctacagcgtg caacagggat ataacagcga
     2701 ggggaaaacg gctaatggta gcgccagcat ggactacaaa ggggcgtttg cagatgcccg
     2761 agtgggctac aactacagcg ataacggcag tcaacaacaa ctgaactacg ctctttcagg
     2821 cagtttagtt gcccattcac agggcattac cctggggcaa tcgctggggg aaactaacgt
     2881 gctgattgca gcaccaggcg cagagaatac tcgtgtggcg aacagcaccg ggctgaaaac
     2941 tgactggcgc ggatataccg ttgtccccta tgccacttct tatcgggaaa atcgaatcgc
     3001 acttgatgcg gcatcgttaa aacgtaacgt ggatcttgaa aatgcagtag tcaacgtggt
     3061 tcccaccaaa ggggcgttgg ttctggcgga gttcaatgcc catgcgggag caagggtatt
     3121 aatgaaaaca tcaaagcagg gtataccgct gcgttttggc gcgatagcga cgctggacgg
     3181 cgtacagact aatagcggca ttattgatga tgatggctcg ctctatatgt ccggtttgcc
     3241 cgctcaggga gcgataactg tacgctgggg cgaagctccc gatcaaattt gtcatatcag
     3301 ttaccagctt accgaacaac aaattaactc tgcgattacg cgaatggatg ccatatgcag
     3361 ataatctttg gagaaaaatg cgtgttatta ctacgactat tttttgccgc cgtcttaatg
     3421 ctatggtgcg ctcaaactgc tgcttatagc gggcagtgtc ataccactca ggggaatccg
     3481 tatattggcg tcaattttgg cgttaaaacc ctggaggaag aagaaaatac ggctggagta
     3541 gttaaagaca aattttatca gtggaacgaa tcgaatgatt attatgtttc ctgtgattgc
     3601 gataaagaca atgtcagaag tggccgatgg gcattcgccg cggattcacc gttagtctat
     3661 ttaggcgaca actggtacaa aattaatgac tatcttgccg ccaaagtttt attgcaggtt
     3721 aaaggcagtt ctcctactgc ggttcctttc gaaaacgtgg gcacaggggc agatacacga
     3781 tggcatattt gcgatcccgg cggtcaacgt ttaggtggcc agggggctag cggtaatagc
     3841 ggtagctttt ccctgaaaat attgcagccg ttcgttggtt cggtcgtcat tcctcctatg
     3901 gcgctggcgc gattatttga atgctacaac atacccgcag gtgattcctg cacgactaca
     3961 ggtacaccgg ttttagtgta ttacctgtct ggtacgatca attcacttgg ctcatgttcc
     4021 gtcgatgccg gagagactat cgaggtcgat ctgggcgacg tatttgcggc taactttcgt
     4081 gttgtagggc ataaacccct tggggccaga acggcagaac tcgcaattcc agtcaggtgt
     4141 aacacgggaa acgaagggtt agttaacgtc aacctgagtc tgacggcaac ctcagacccc
     4201 agctatcccc aggcgattaa gacgtcacgt cctggcgtgg gcgtggtggt gaccgatagc
     4261 cagaacaaca ttatttcccc tgctggtggg acactaccgc tctctattcc tgatgatgca
     4321 gacagtatcg cgcgaatgaa tgtctatcca gtcagcacga caggcgtacc accagaaacc
     4381 gggcgatttg aagccacggc aacggtgaga ataaattttg attaacgcgt gaacgtatga
     4441 agaaaaaaac gatatatcag tgcgttattt tgttctttag ccttcttaac atccatgttg
     4501 ggatggctgg gcctgaacaa gtcagtatgc atatttatgg gaatgtggtc gatcagggct
     4561 gtgatgtcgc caccaaaagt gcattacaaa atattcatat tggtgatttt aatatcagtg
     4621 attttcaggc cgcgaatacc gtaagcactg ctgctgattt gaatattgat atcaccggtt
     4681 gtgccgctgg tattactggc gcggacgtcc tttttagcgg cgaggctgac acccttgcgc
     4741 cgacactgct caaactaact gacacaggcg gaagcggtgg tatggcaacg gggattgccg
     4801 tgcaaattct tgatgcgcaa agtcagcaag aaatcccgct caatcaggtc cagcctctta
     4861 cgcccttaaa agccggggat aacacactca aatatcaact tcgttataag tccacaaagg
     4921 cgggagcaac gggcggtaat gcgacggcgg ttctctattt tgatctggtt taccagtgaa
     4981 ggagtgatgt tgaaacggat aatctggatt ctgttcttac tgggattaac ggggggctgt
     5041 gagctatttg cccatgatgg cacggtcaac attagcggat cgtttcgccg taatacatgc
     5101 gtgctggcac aggatagcaa gcaaatcaat gtgcagttag gcgatgtctc gctgacacgt
     5161 ttttttcatg ggaattatgg cccggagaaa tctttcatca ttaatttgca ggattgcgga
     5221 acagatgtca gcacggttga cgtcaccttt tcaggaaccc ccgacggagt gaagagcgaa
     5281 atgctgtcca ttgaaagtgg tacggatgca gccagcgggc tggcaattgc gattctggat
     5341 gatgcgaaga tattgattcc gcttaaccag gcgagtaaag actacagtct acatagcggt
     5401 aaggtgccat taacttttta tgcgcaattg cgacctgtca atagcgatgt gcagtcgggt
     5461 aaagtgaatg ccagcgcgac atttgtactt cattatgact aatacgtgga acagattggc
     5521 gctcttgatt ttcgccgttt tatcgctgct ggtggcgggt gaattgcagg caggagtggt
     5581 ggtcggcgga acgcgattta tctttccggc agacagagaa tcaatatcta ttttactgac
     5641 taatactagt caggaatcct ggcttattaa cagtaaaatc aatcgcccaa cgcgttgggc
     5701 cggggggaag cgtcgacagt gccagcacca ttactggccg ctccgccact tattctcctg
     5761 aagcacggta ctacaggcac gttgcgcttg ctgagaacgg aaagcggcat cttgccagtg
     5821 gatcgcgaaa cgctatttga gttaagcatt gccagcgtgc catccggcaa agttgaaaat
     5881 cagagcgtaa aagtggcgat gcgctcggta tttaaactgt tctggcgacc cgaaggtttg
     5941 ccgggcgacc cgctggaagc ttatcaacaa ttacgctgga cacggaattc gcagggtgta
     6001 caactcacta acccaacgcc ttactacatt aacctgattc aggtgagcgt aaatggtaaa
     6061 gcgttaagta atgcgggagt tgtgccgcct aaaagccagc gtcagacaag ctggtgtcag
     6121 gcaatcgcac cgtgtcatgt cgcctggcgg gcgataaatg attacggcgg gttgagtgca
     6181 aagaaggagc aaaatctgcc ctgaaacagg ttcggaaaac gtttgcgttt tttttgccgc
     6241 aggtcaattc ccttttggtc cgaactcgca cataatacgc ccccggtttg cacaccggga
     6301 atccaggaga gttcatgtac taccccttcg ttcgtaaagc ccttttccag cttgatccag
     6361 agcgcgctca tgagtttact tttcagcaat tacgccgcat taccggaaca ccgtttgaag
     6421 cactggtgcg gcagaaagtg cctgcgaaac ctgttaactg catgggcctg acgtttaaaa
     6481 atccgcttgg tctggcagcc ggtcttgata aagacgggga gtgcattgat gcgttaggcg
     6541 cgatgggatt tggatcgatc gagatcggta ccgtcacgcc acgtccacag ccaggtaatg
     6601 acaagccgcg tctctttcgt ctggtagatg ccgaaggttt gatcaaccgt atgggcttta
     6661 ataatcttgg cgttgataac ctcgtagaga acgtaaaaaa ggcccattat gacggcgtcc
     6721 tgggtattaa tatcggcaaa aataaagata cgccagtgga gcagggcaaa gatgactatc
     6781 tgatttgtat ggaaaaaatc tatgcctatg cgggatatat cgccatcaat atttcatcgc
     6841 cgaatacccc aggattacgc acgctgcaat atggtgaagc gctggatgat ctcttaaccg
     6901 cgattaaaaa taagcaaaat gatttgcaag cgatgcacca taaatatgtg ccgatcgcag
     6961 tgaagatcgc gccggatctt tctgaagacg aattgatcca ggttgccgat agtttagttc
     7021 gccataatat tgatggcgtt attgcaacca ataccacact cgatcgttct ctggttcagg
     7081 gaatgaaaaa ttgcgatcaa accggtggct taagtggtcg tccgcttcag ttaaaaagca
     7141 ccgaaattat tcgccgcttg tcacaggaat taaacggtcg cttaccgatc atcggtgttg
     7201 gcggcatcga ctcggttatc gctgcgcgtg aaaagattgc tgcgggtgcc tcactggtgc
     7261 aaatttattc tggttttatt tttaaaggac cgccgctgat taaagaaatc gttacccata
     7321 tctaattatt tcttcgaatt cctctttata agataatcag ggctttattt tcagccctgg
     7381 ttgttttata ttcatagctg ttgcttattt agacattttg tacttttatt gttgaggtta
     7441 ttaagcgaag cgacaatgga ttgtgttgct gcggttttat agggtagggg agaggcagat
     7501 gcgaattaaa ccagacgata actggcgttg gtattacgat gaagagcacg atcgaatgat
     7561 gctcgattta gccaatggta tgctatttcg ctcacgtttt gcgcgcaaaa tgttgactcc
     7621 agatgccttt tctcccgcag gcttttgcgt tgatgatgcc gcgctctatt tctcttttga
     7681 agaaaagtgc cgcgatttta atttatctaa agaccaaaaa gccgaactgg tgctgaatgc
     7741 actggtagca attcgttatc tcaaaccgca aatgccgaaa agctggcatt ttgtttccca
     7801 tggcgaaatg tgggtgccca tgccgggcga tgcggcctgc gtttggttga gcgatactca
     7861 cgagcaggtc aatttgctgg tcgttgaatc tggcgaaaat gccgcgctat gcctgctggc
     7921 acaaccctgc gttgttattg cgggtcgcgc gatgcagttg ggcgacgcca ttaaaatcat
     7981 gaacgacagg ctgaaaccgc aggtgaatgt tgacagcttc agcctcgaac aggcagtcta
     8041 acgcgtcagc ttaagggcag tcttcggtac acagctacag caaagaatgg tgccatcatc
     8101 gcccattgct gattttttca gcggcgtgac ttcgccttct aaaagctgaa cacggcaact
     8161 tccacaaatg cccgcgcggc aagaataagg gatacgaatt ccctgatttt ctaattgctc
     8221 cagcaacact tgttggttat ttccacgaaa tgcctgtccc tgccagtcaa tatctacatt
     8281 ggcgtccggt tgttgcgtga tgttggcggt atcatcagcg gcagctgcgc cgtaaatttt
     8341 tgccggagcc gttgccagaa tttccacctc atcgccaacg cgaatcacgc cgctattacg
     8401 ggcaattaaa ttctgaccaa aatcgacatc gccgttatct tgggcagtgc ggaaagattg
     8461 caatgttttt aatggttcgc ctgccggatg tttttgccct ttttctgggc tgacggtggt
     8521 gaaaatacag cggctacaag gtttaaccac atcaaacacc acatcaccaa tgcgaatcac
     8581 tttccagcga tcttcttccc aggctgacgc gccggaaacc accagattgg ggcggaattg
     8641 ctccattttt acactggccg gacaacgttg ttggagatca cgtaacgagg cttcgttagc
     8701 aagaaggtaa ggatagccat cagcaaatga cagaggtaca gtgttgtggc gtttcacgcg
     8761 ccgggtcatt tgtggcccca cccagcgtaa ttgcacttcg cgggagaaaa atccacttag
     8821 ccatttgttg atcgcgtctg gcgcaattcg cgcggtaaaa tgtgtgcccc aaacttcggt
     8881 tggtgcgtct tgtgtggcga aatcagcaaa acgaacatat gcgctactgc catctggtgc
     8941 ggtgagatgc aagccatcat gcacaggtga aggagtaaac cgtaccatct ggggaaactg
     9001 gcgagcggta ataaacgtac cgtcaggttc cgtgatcata aagatgcgat cgaaggccag
     9061 accactgaca tcagccagag catgtgtaag accaatgccg cgcatcgatt taacaggatg
     9121 aataaaaagc cgggttaatg tcgccacggt gcggtcctca aatgaaaata agccctcaac
     9181 tttatgacat gacgcgctta ttagctataa tgcgcaacaa ttttcttagc gcctgtcccg
     9241 ttaggctatt ttatttgtca gtttggccct gggttgtgct cgaaatcctc acgtaattgt
     9301 gtacgctccg gtttctccgc gctctccatg tccagactga ctgcaacaat tacgcctact
     9361 gcggtaggct cttagagtaa aagtgacgat atgaattctc tgtttgccag tacggcccgt
     9421 gggctggaag agctgttaaa aactgaactg gaaaatctgg gggccgttga atgcctggtg
     9481 gttcagggtg gggtccattt caagggcgac acacggcttg tttaccagag cctgatgtgg
     9541 agccgcctgg cctcgcgtat tatgttgccg ctgggcgagt gtaaggttta cagcgattta
     9601 gacctctatc tcggtgttca ggcgatcaac tggacagaga tgtttaatcc tagcgcgacc
     9661 ttcgctgtcc acttcagtgg tttgaatgac accatccgca acagtcagta cggcgcgatg
     9721 aaagtaaaag acgcaatcgt cgatgctttc acgcggaaaa atctgccgcg tccaaatgtt
     9781 gatcgcgatg cgccggatat ccgcgttaac gtctggctgc ataaagaaac cgccagtatc
     9841 gctcttgatc tgagtggtga tggtttacat ctgcgtggct atcgcgatcg tgctggtatt
     9901 gcgccgatca aagaaaccct ggcagccgct attgtgatgc gatccggctg gcagccagga
     9961 acaccgctgc tcgacccgat gtgcggttcc ggtacattgc tgattgaagc ggcgatgctg
    10021 gcgaccgatc gcgcaccagg cttgcaccgt gggcgttggg gctttagcgg ctgggcgcag
    10081 catgatgaag ctatctggca ggaagtgaaa gcggaagcgc aaactcgcgc ccgtaaaggc
    10141 ctggctgagt atagctctca tttttacggt tcggacagcg acgcacgggt gattcaacgt
    10201 gcacgcacta acgcccgtct tgcggggatt ggtgaactga tcacctttga ggtgaaagat
    10261 gtcgcgcaac tgaccaatcc gctgccgaaa gggccgtacg gcacagtgtt gagcaacccg
    10321 ccatacgggg aacgtctgga cagcgaaccg gcgctgattg cgctgcatag cctgctgggt
    10381 cggatcatga aaaaccagtt tggtggctgg aatctctctt tgtttagtgc cttgccggat
    10441 ctgctaagct gcttgcagct gcgtgcagac aaacagtaca aggcgaaaaa cggcccgctg
    10501 gactgcgtac agaaaaatta ccacgttgcc gaaagcactc cagacagcaa accggcgatg
    10561 gtagcggaag actacgccaa ccgcctgcgt aagaacctca aaaaattcga gaagtgggct
    10621 cgccaggaag gaattgaatg ttaccgcctg tatgacgccg atctgccgga atataacgtt
    10681 gccgttgacc gttatgccga ctgggtggtg gtgcaggagt atgcaccgcc aaaaactatt
    10741 gatgctcaca aagcgcgtca gcgtctgttc gatattatcg ctgcaaccat ttcggtactg
    10801 gggattgcgc caaacaaact ggtgctgaaa acccgtgaac gtcagaaggg caaaaatcag
    10861 taccagaaac tgggcgagaa gggcgagttt ctggaagtta ccgaatataa cgctcacttg
    10921 tgggtgaacc tgacggatta tctcgatact ggtctgttcc tcgatcaccg catcgcccgt
    10981 cgtatgctcg gtcagatgag caaaggcaaa gatttcctca acctgttctc ttataccggc
    11041 agcgccaccg tgcatgcggg attaggcggt gcacgcagca ccaccaccgt ggatatgtcg
    11101 cgtacttatc tggagtgggc agaacgcaac ctgcgtctga atggcctaac cgggcgtgcg
    11161 catcgcctga ttcaggccga ttgcctggcg tggctgcgtg aggcaaatga acagttcgat
    11221 ctgatcttta tcgatccgcc aaccttctct aactcaaaac gaatggaaga tgcgtttgat
    11281 gttcagcgcg atcatctggc gctgatgaaa gatttgaaac gtctgctacg tgcaggtggg
    11341 acgatcatgt tctcgaacaa taaacgtggc ttccgtatgg atctcgacgg gctggcaaaa
    11401 ctgggactga aagcacaaga aattacgcaa aaaacgctct cccaggattt cgcccgtaac
    11461 cgccagatcc acaactgctg gctgattacc gcagcctgaa aggaatagta atgtcattaa
    11521 tcagtatgca tggcgcatgg ctgtcgttca gcgacgcgcc gcttctcgat aacgcagaac
    11581 tgcatatcga agataacgaa cgtatttgtc tggtgggccg caacggcgca ggcaaatcga
    11641 cgttaatgaa gatcctcaac cgtgaacagg ggctggatga cggtcgcatt atttatgagc
    11701 aagatttgat tgtagctcgt ctgcaacagg atccgccgcg taacgttgag ggtagcgttt
    11761 atgatttcgt tgccgaaggc attgaagaac aagcggaata cctgaaacgc tatcacgata
    11821 tttcgcgcct ggtgatgaac gacccgagcg agaaaaatct caacgaactg gcgaaggttc
    11881 aggaacagtt ggatcaccac aacctgtggc agctggaaaa ccgcatcaac gaagtgctgg
    11941 cgcaactggg gttagatcct aacgttgcgc tgtcgtcgct ttccggcggc tggttgcgta
    12001 aagcggcatt aggacgcgcg ctggtgagca atccgcgcgt attgctgctg gacgaaccga
    12061 ctaaccatct ggatatcgaa accatcgact ggctggaagg gttccttaaa accttcaatg
    12121 ggacgattat tttcatctcc cacgaccgtt cgtttatccg caatatggcg acgcgtattg
    12181 ttgatctcga tcgtggcaag ctggtgacct atccagggaa ttacgaccag tacctgctgg
    12241 aaaaagaaga agccctgcgc gtggaagaac tacaaaatgc cgagttcgat cgcaaactgg
    12301 cgcaggaaga ggtgtggatc cgccagggga tcaaagcacg ccgtacccgt aatgaaggcc
    12361 gcgtacgcgc cctgaaagcc atgcgtcgcg agcgtggtga acgtcgcgaa gtgatgggta
    12421 ccgcaaagat gcaggtggaa gaggccagcc gctccggtaa gatcgttttc gaaatggaag
    12481 acgtttgcta ccaggttgac ggtaagcaac tggtgaaaga tttttcggcc caggttctac
    12541 gtggcgacaa aattgccctg attggtccga atgggtgcgg caaaaccacg ctgctaaaac
    12601 tgatgctcgg tcagcttcaa gcggacagcg ggcgtattca cgttggcacc aaactggaag
    12661 tggcttattt cgatcagcac cgcgcggaac tggatcccga taaaacggtg atggataacc
    12721 ttgccgaagg taagcaagag gtgatggtta atggcaagcc acgccacgta ttgggctatt
    12781 tgcaggactt cctgttccat ccaaaacggg cgatgacgcc ggtacgtgtg ctttctggcg
    12841 gtgagcgtaa ccgcttgttg ttggcgcgtt tgttcctcaa accaagcaac ttattgattc
    12901 ttgacgaacc gaccaacgat cttgatgtcg aaacgctgga actgctggaa gaactgatcg
    12961 acagctatca gggcacggta ttgctggtta gccacgatcg tcagtttgtc gataacaccg
    13021 ttacagaatg ctggatcttc gaaggcggcg gtaaaattgg tcgttatgtt ggcggttatc
    13081 atgatgcccg tggtcagcaa gaacagtatg tggcgctcaa acagcctgcg gtgaaaaaaa
    13141 gcgaagaagc cgccgtgcca aaagcagaaa ctgtaaaacg cagcagtagc aaactaagct
    13201 ataaattgca gcgcgaactg gagcagctac cgcaattgct tgaagatctg gaggcgaagc
    13261 tggaagcttt acagacgcaa gtggcggatg cttccttctt cagtcagccg catgagcaga
    13321 cgcaaaaagt gcttgctgat atggctgctg cagagcagga gctggagcaa gcctttgaac
    13381 gctgggagta tcttgaagcg ttaaaaaatg gtggctgatc gcaaaatagt cgatttaaac
    13441 agagacagct gacaacggta aaattgcctg atgaactggg tttatcaggc atgaaaacca
    13501 acactttgtt agtcatctgc aaaatagcgc atcattaagg agtaccaatg tgcgaacatc
    13561 atcatgccgc gaagcacatc ctgtgctcgc agtgtgacat gctggtggcg ttaccgcgcc
    13621 ttgagcatgg tcagaaagcg gcatgtcccc ggtgtggcac aacgttaacc gtggcgtggg
    13681 atgcccctcg gcagcgtccc accgcctatg cgttggctgc attgttcatg ctgttgctgt
    13741 ccaacttgtt tccttttgtg aatatgaacg ttgcaggagt taccagtgaa attacattac
    13801 tggaaattcc cagcgtgctt ttttctgagg actacgccag cctcggcacc tttttcctgt
    13861 tgtttgtgca actggttccc gcgttttgtc tgataaccat tctgttactg gtgaatcgcg
    13921 cggaattacc ggtccgttta aaagagcaac tggcacgggt gctttttcaa ctcaaaacct
    13981 ggggaatggc ggagattttc ctcgcgggtg tgctggtcag tttcgttaaa ctgatggctt
    14041 acggcagcat tggcgtaggc agcagctttc tcccctggtg tttattttgt gtcctgcaac
    14101 tgcgcgcttt tcagtgcgtt gatcgtcgct ggttatggga cgatatcgcc ccgatgccag
    14161 aactgcgcca gccgctaaaa ccaggcgtca cggggatacg tcaggggctg cgttcgtgct
    14221 cctgttgtac ggcaatcctt cctgctgatg aacccgtgtg cccgcgctgt ggtactaaag
    14281 ggtacgttcg acgtagaaac agcctgcaat ggacactcgt gctgcttgtt acgtccatca
    14341 tgctgtatct tccggctaat attttgccaa tcatggtgac ggatttatta ggctcgaaga
    14401 tgccatcgac gattctcgct ggggtcatcc tgttatggag cgaaggctct tatcccgtcg
    14461 ctgcggtgat cttccttgcc agtattatgg tgccgacgtt aaagatgatc gccatcgcgt
    14521 ggctgtgttg ggatgccaaa gggcatggca agcgcgacag tgaaagaatg catttgattt
    14581 atgaagttgt tgagtttgta ggccgctggt cgatgattga cgttttcgtt atcgcggtgc
    14641 tctcggcgct ggtgcgtatg ggaggtttaa tgagtattta tccggcaatg ggtgcattaa
    14701 tgtttgcttt agtcgtcata atgacaatgt tttctgctat gacgtttgac ccgcgtttgt
    14761 cgtgggatcg tcaacctgaa tcagagcatg aggagtcctg acagtatgga atctaataat
    14821 ggggaagcca aaatccagaa agtgaagaac tggtctcccg tgtggatatt tcctatcgtc
    14881 acggcgctca ttggggcctg ggttcttttt tatcattaca gccatcaggg accggaagtg
    14941 accctgatca ccgcgaatgc ggaaggaatt gaaggtggca aaaccaccat taaaagccgt
    15001 agcgttgacg tcggcgtggt tgaaagcgcc acactggctg atgatttgac acacgttgaa
    15061 atcaaagcgc ggctgaattc cggtatggaa aaattgctgc ataaagatac cgtcttttgg
    15121 gtggtgaaac cgcagattgg tcgagaaggg attagcggtc tgggaaccct gctgtctggg
    15181 gtttatatcg aactgcagcc aggcgcgaaa ggcagcaaaa tggataaata cgatttgctg
    15241 gactcgccac cgttggcccc gcctgatgcg aaaggtatcc gtgtgattct cgatagcaaa
    15301 aaagccgggc agctctcgcc aggagatccg gtgctgttcc gtggctatcg ggtaggttcg
    15361 gttgaaacca gcaccttcga tacgcaaaaa cgcaatatca gttatcaact gttcatcaat
    15421 gcaccttatg accgactggt gaccagcaat gttcgcttct ggaaagatag tggcattgcg
    15481 gttgatctga cgtcagcggg gatgcgtgtg gagatgggct cattgacaac gctgcttagt
    15541 ggcggtgtta gctttgatgt gccggaaggt ctggatttag ggcagccagt ggcaccgaaa
    15601 acagctttcg ttttgtatga tgatcagaag agcattcagg attcgttgta caccgatcac
    15661 attgattatc tgatgttctt taaagattcg gtacgcggtc tgcaaccggg agctccggta
    15721 gaattccggg gtattcgcct gggtaccgta agcaaagtgc cattctttgc gccgaatatg
    15781 cgtcagacat ttaacgatga ttaccgtatt ccggtactga ttcgtatcga gccagagcgg
    15841 ctgaaaatgc agcttggcga aaatgcggat gttgttgagc accttggcga attgttgaaa
    15901 cgtggtttac gcggatcgct gaaaaccgga aacctggtca ctggtgcact gtatgttgat
    15961 ctcgatttct atccaaatac gcctgcaata accggtattc gtgaatttaa tggttatcag
    16021 attatcccga ctgttagcgg cggcctggcg caaatccagc aacgactgat ggaagcgttg
    16081 gataagatca acaaactgcc attgaatccg atgattgaac aggcaaccag tacgctttct
    16141 gaaagtcagc gcacaatgaa aaacctgcaa acgacgctgg atagcatgaa caagatcctc
    16201 gccagccagt cgatgcagca gttgccgacg gatatgcagt caacgttgcg tgaattgaat
    16261 cgcagcatgc agggcttcca gcctggctcc gcagcctaca acaagatggt ggcggatatg
    16321 cagcgccttg atcaggtgtt gcgagaactg caaccggtgc tgaaaacgct caatgagaag
    16381 agtaacgcgc tggtatttga agcgaaggac aaaaaagatc cagagccgaa gagggcgaaa
    16441 caatgaaaaa gtggctagtg acgattgcag cactgtggct ggccggatgc agctccggcg
    16501 aaattaataa aaactattac cagttacctg tggtgcagag cggtaaacaa agtaccgcca
    16561 gccagggcaa tcgcctgtta tgggtagagc aggtcactgt tcctgactat ctggcgggga
    16621 atggtatggt ttatcaaacc agtgatgtga agtatgtgat tgccaataac aacttgtggg
    16681 ccagcccgtt ggatcaacag ttgcgcaaca ccctggttgc caacctgagt acgcaactgc
    16741 ccggctgggt ggttgcctcc cagcctctgg gaagcgccca ggacatgctc aatgttaccg
    16801 tcacggagtt taacggtcgc tatgatggca aggtcattgt cagtggtgag tggctgttga
    16861 accaccaggg acaactgatc aaacgtccgt tccgtctgga aggggtgcaa actcaggatg
    16921 gttacgatga gatggttaaa gtactggcca gtgtctggag tcaggaagcc gcttctattg
    16981 cgcaagagat aaagcgtcta ccttaattat aaagatttgt aaatataacc gacttcggta
    17041 tgttgcctga ggcggttttt ttgtctctaa cgtgcggaaa aagttgttcc tcttcacatt
    17101 ttttgtacaa ccgacatacc cgtgtagctc acaaatatga cagtggcgtg aattttgcgc
    17161 attgacggca gttatgattc gcggtaatgc ttaactgtga ttgcacattt agtaatcact
    17221 gttttctttt ccaccagaaa ccagtatgag ggaaacgagg catgaagaga caaaaacgag
    17281 atcgcctgga acgggcacat caacgtggtt atcaggccgg catcgccgga cgctcaaaag
    17341 aaatgtgtcc ctatcagacg ctgaatcaaa ggtcacaatg gctgggaggc tggcgagaag
    17401 ccatggcgga cagggtagta atggcctgat tctgtctctt taaaaagaaa cctccgcatt
    17461 gcggaggttt cgccttttga tactctgtct gattataatc agaaggcaga cgtatcctgg
    17521 aacagaccga ctttcaggtc gctggcggta tagatcagac gaccatcaac cagcacttcg
    17581 ccatccgcca ggcccataat cagacgacgg ttaacaatgc gtttaaagtg aatacggtag
    17641 gtcacttttt tcgctgtcgg cagtacctga ccagtgaatt tcacttcgcc aacgcccagc
    17701 gcgcggcctt taccttcgcc gcccagccag ccgaggtaga accctaccag ctgccacatt
    17761 gcgtccaggc ccaggcatcc cggcataacc ggatcgccaa taaagtggca tccgaagaac
    17821 cacagatccg gattgatatc cagttctgct tcaacatacc ctttgtcgaa gttaccaccc
    17881 gtttcggtca ttttgaccac acggtccatc atcagcatgt tcggtgctgg caattgcggg
    17941 cctttagcgc caaacagttc accgcgacca gaggcaagaa ggtcttcttt tgtataggat
    18001 tcgcgtttat ctaccatgtt ctctgtaagc cttattttat tgaagcacgc aggatagcta
    18061 acacgtgtac gctgaacaag tccgatcagt tcggaataaa ccagttcagc caacgtaatg
    18121 gccatggaaa acggtgacgt ccttcctgtt gcgatgcttg cgcgatacgt tcctggatgg
    18181 tttgcatcag cgtcgtttgg ccttcgccat cccacaccag atttaataat aacggcagtg
    18241 cgtcagtcac atcgtctact gcccagatgg tgaatttgcc ttcttctacc gctttcatca
    18301 gttcactgtg aagacttaaa tggcgaacgt tagcagtggg gataatgaca ccttgtttcc
    18361 cggttaactc acgttgctgg caaatagcaa agaagccttc gattttctca tttaaaccac
    18421 cgaccggctg ggcgcgaccg aactgatcga ctgaacctgt gatagcgata ctctgattca
    18481 ccggcacatc ggcgagggcg cttatcaggg cgcagagttc agccatcgag gcactatcgc
    18541 catccacttc actgtatgac tgctcaaatg tcagcgatgc tgagaagggg atctgttgct
    18601 caagctgtag ttccgacatc aggaacgcct gcatgatcat catccctttc gcatggatat
    18661 tgccgccaag ctccgctttg cgttcgatgt cggtgaattc accatcgcca atatgcacaa
    18721 cgcagctaat gcgagaaggt tcgccaaaag cgcgtggatg acccggaaat tcaatgaccg
    18781 aaagggcgtt aatttgcccg atgcgttcgc cttcggtttc aatcaggatt tgctcctgaa
    18841 ggatctcatc ctgcatacgt tcagcgagga aaccttcgcg ccattcacgc tgctgtagca
    18901 ttaagtttag ctgctcgccg gagaaggtgt cgccatcgca cagggaggcg acctctttac
    18961 actggcggag gatccactgt gggctaagcg gcagcgtttc ttgttcaccg gtgtagcgtg
    19021 ctgcttcgcg gataagtacc ggccaggcat ccgctcccgg tgcaggtaag tgattatgtc
    19081 tggcggtaaa tgtcacccag cgacaccact ggcttactga ctccgcatcg acaatctgca
    19141 gagtatcttc aaattcgcta taaatagcct gctctgaaag tcctggttcc atctcctgga
    19201 aatcagccaa tgattcgcgt tcgcctacca gaatgacttt cagcttcaat ggcatcgaag
    19261 gcacagagac ggggagaggg cgggactcat caaacgcaac ccagtcaaaa cgcccgcggt
    19321 taacgatatt tttcagccgc atccacagca gaggttgcgc cagcagtgta cgcaaagaga
    19381 tgatgagaat accgccattt gcctgatgca ccagaccagg ctgcagggta atgtcgccat
    19441 taaactggcg caggcagcca aagagttgct ccgcttctac ccagtcggct gcgacaactt
    19501 gcgttaaagt cgcaaaatta tcatctgcat tcactgcgtg acgtaagcgg atgctgtggc
    19561 cggaaacctc atagtgaccg cccaccagtt ggcctgcatc gctttgtagc gtatgcgcgg
    19621 catcggcaat aagattcaga tactcagact cttccggggc cttagccagc ataaaagagg
    19681 aggatgctcg cgtatgcagc aactgctcca gcgcaaattg cagtcgcggt tgagtatcac
    19741 tgaataaagg atcgttttcg tcaatcaaat gtggctgagc aaatatttcc tgatagctat
    19801 cggtatcagg aaccaggtca cgccatgcaa gtttcgtaat ggtcaaagtt gatgtttttt
    19861 agtctgttgt caaagccgcg attataccgt aaccggcact acagcacacg tagaaagcac
    19921 cgacaatact cctggcatgg gcgttaaagc tcacaggatg gagattcttt tcttcactgg
    19981 cctaaaaagc tgatattctg taaagagtta cacggtaaca ttgagatcgc tatgaaatat
    20041 caacaacttg aaaatcttga aagcggttgg aaatggaagt atctggtgaa gaagcatcgc
    20101 gaaggggagt taatcacccg ttacatagaa gccagtgccg cccaggaagc cgtcgatgtg
    20161 ttgctctcgc tggaaaatga acccgtgctg gtaaatggct ggattgacaa gcatatgaat
    20221 ccggaactgg tcaatcgcat gaagcagacc attcgggcca gacggaagcg ccattttaat
    20281 gcggaacacc agcatacgcg caaaaaatcg atcgatctgg aatttattgt ctggcaacgt
    20341 ctggctggtc ttgcgcagcg tcgcggtaaa acgctttctg aaacgattgt tcagctgatt
    20401 gaagatgcgg aaaacaaaga gaaatacgcg aataaaatgt cttctctgaa gcaggatctg
    20461 caggcattgc tgggtaagga ataactgacg aaagtcagtt caatttacta aaggcaaaaa
    20521 aaaccccgca gcagcggggt ttttctacca gacgagaact taagcctgcg gctgagttac
    20581 aacgtctttg atacctttaa cttcgatctc tacgcgacga tccggagcca ggcagtcgat
    20641 cagtgcagca cgttgtttca cgttgtcaca ggtgttgcca gtaaccgggt tggattcgcc
    20701 tataccacgt gcggagatct tgtctgccgg gatacctttg gagatcaggt aatcaacaac
    20761 agactgagca cggcgctcgg acagaccctg gttgtaagcg tcagaaccga tgcggtcggt
    20821 gtaacccaga acaactacgg aaccgtcttt cggatccagg ttgctcagct ggctgtacag
    20881 ctgatccaga gcagcctgac cttccggttt cagggttgct ttgttgaagt tgaacagaac
    20941 gtcagacttc agagtgaagt gcttggtctg tacttccggt gccggagctg gagccggagc
    21001 aactactgga gctgcttcgc cctgaccgaa acggtaggaa acaccaaggc tcagcaggcc
    21061 gttgtccgga cgagtaccga tggtgtgtgc gtcaccgatg ttgttggtcc actgatattc
    21121 cagacgggta gcgatttcag gagtgatggc ccattcaaca ccacctgcga ataccggaga
    21181 aacgccggta tcgtggtttt tctcagattc acctgtcaca ttgttgtgag ctttggtgtc
    21241 tgcacgccaa accataccac ccagacgagt gtacacgtcc aggtcgtcag tgattgggta
    21301 acccagttta gcggtcaact gaacgccctg agctttgtat gcaccgtttt caacgctgcc
    21361 tttgtacggc atacgaccta accagtcgta acccatttca aagccaacat acgggttaac
    21421 ctggtaacca ccaaaagcac cagcgcccag ttggttttca tgggtcgggc cattgttgtc
    21481 gatgaaacca gtgtcatggt actgggacca gcccagttta gcaccagtgt accaggtgtt
    21541 atctttcgga gcggcctgcg ctacggtagc gaaaccagcc agtgccactg caatcgcgat
    21601 agctgtcttt ttcatttttt gcgcctcgtt atcatccaaa atacgccatg aatatctcca
    21661 acgagataac acggttaaat ccttcaccgg gggatctgct caatattaac tctaccgata
    21721 tcttcggctt atgccgagca cccctggcga tgtaaagtct acaacgtagt tgaaaactta
    21781 caagtgtgaa ctccgtcaga catatgaaaa aaaagtcttg tataaggtac gtttaatctt
    21841 ttttgtcagc gacaatttac agaagaaaat cgcggaaacc gcttcagaca agcctccgca
    21901 aggaaaatta gtcacgactg aaagcattgg ctgggcgaca aaaaaagttc caggattaat
    21961 cctaaattta cttaatgata caaattagag tgaattttta gcccggaaag ttgtctcgtt
    22021 gcgtgagagg atgcgcttac cggacgcata ataaacccca tcgcgttacc ttcatttgcc
    22081 gcatcaacaa gttcagcatg ctcttcttca gtcaaatcat ctgccaccca accgatcacc
    22141 acactgtaat tgcccgtgcg taaagcgcga accattgact ctacggtgtg gcaaggggtg
    22201 agctggctaa tctgcattac tttcgttaag ggtagcccag atgcctgaac ccattcccga
    22261 ctcagttttt gttgcggtgt taaccagagt tgccagcgcg attgctgacc gagttgctgt
    22321 aacaatggca acagtagaag ttgcgtcatc atgggctgat cttcgcgata gacaacttca
    22381 ctgataagcc cggctgtagt gttttccgta gagacacgcg caattttact tgctgcggat
    22441 gagaacgacg aagaacgatg tgcatagcct gaagtgtaca taatcaatcc agtccctgtg
    22501 agttgctgta tgtatgtaca gtgcatacag tgacaacaaa gatcaaccct attttcggaa
    22561 agagcctcgc aaattttgtc gttggtgacg ggaaaacata aattaatctt gccccttaag
    22621 aataagttgc ctattttcgt agttaacgga tccgttaatg tgaatcattc ttttatgtta
    22681 tgattttaaa aggaatttta tgaaaagcct ctcctataag cggatctata aatcacaaga
    22741 atacctggca acgttgggca caattgaata ccgatcattg tttggcagtt acagcctgac
    22801 cgttgacgac acggtgtttg cgatggtttc tgatggtgag ttgtatcttc gggcttgtga
    22861 gcaaagtgca cagtactgtg taaaacatcc gcctgtctgg ctgacatata aaaagtgtgg
    22921 ccgatccgtt accctcaatt actatcgggt tgatgaaagt ctatggcgaa atcaactgaa
    22981 gctggtgcgt ctgtcgaaat attctctcga tgctgcgctg aaagagaaaa gcacgcgcaa
    23041 tacccgggaa agacttaaag atttgcccaa tatgtctttt catctggaag cgattctcgg
    23101 ggaggtgggg attaaggatg tacgggcgtt acgtatactt ggggcaaaaa tgtgttggtt
    23161 gcgactgcgg cagcaaaaca gtctggtgac agaaaagatt ctgtttatgc ttgaaggtgc
    23221 cattatcggc attcatgaag ctgcgctccc ggtggcacgc cgccaggagc ttgcagaatg
    23281 ggctgactct cttacgccga aacaggagtt tcctgcggaa cttgagtaat ctggcgttgc
    23341 agacgaccaa tctcaggcag taatgcaatc aataatccaa cttgttgtac gaccagaggt
    23401 tctttgctgt ctgcccgtgg ttcaagttgc tgcatccgct gtttcaggcc agctaatgcc
    23461 tgattgacgc gttcttcatc agcaggttga tgatgtaacg cgtcatcaac atagcaaact
    23521 gcgtcatcaa gaaacgccag aatttcagga ttagttaact gctcccggtg agcaccgagg
    23581 gctgagatat agctggtaaa cgtatggtta aggcacagca accgaaacgc ggcctcgcga
    23641 atttgcgtgg taacgttcgg ctcgctggac atatttgata ccaccgacgc cagttcagca
    23701 tcacggttgt gtgcatcgcg gcgggcaata cgatacgcca gacggttatc acgtccctga
    23761 tggtattgct ccagtatggc gtcgagatac cgacagttgg cctctgtggc gcgttcgagc
    23821 atgcgcggca gattgcgaaa cttccagtca ggccagatgt agctcactgc cgcccacgca
    23881 atggcacaac caatcagcgt atcaattacg cgaggtaacg ccacttcaaa accttcaccc
    23941 agtaagttaa aacacagtag caccaaaagt gtgatgaaca tcgttgcatg ggcgtattgc
    24001 acgttacgga aggcaaaaaa gagcacgccg gtaataacca gcagcaccag ctgcccttcc
    24061 agtgatggca caaaccacag cacaggaatg ccaatggcga tacctatcag cgtaccaata
    24121 atccttaact tcaggcggtg gcgcgtggcg ttatagtttg gctggcagac aaacaaactt
    24181 gtcagcaaga tccaataccc gtgatgcatt ccggttattt gaatgatggc gtagccgaag
    24241 cacaatacca gcgacattct taccgcatga cggaagaggg cggattccgg cgtgaagtga
    24301 cggctaagac gcagccagat atcactcaat ccgtgcgggc tgtcatcagc gagctcattt
    24361 tcgtcattat tatggggtag tgcctgggcc tgttctgatt caattgttgc cagttgggca
    24421 tcaatggcgc gtaaattgtt cagcaaaaat cccagtgttt tgagtaaatc ggcaggtgcg
    24481 ccgttatcgc gcatccgctc cagcgcagca tcaatatgcg taaaagcgcg ctcgaaatgc
    24541 agatcatgtt gataaggctg acgcaacaaa atacagcgtg acagttgctg gcacgcctgg
    24601 ccctgcatcg acatcagccg ctgaaaacgg aacagcacgt cgctgtggcg aaaatgttca
    24661 cgcaatgttt gatactgaat atgagaagag ctggcacgct cgtgaatatc ctgtgcgaca
    24721 aagtaataat gcagcgtgcg acgcgttccc cgttgaccac gatcgccacg taagcgggtc
    24781 agcagcgaga gtttcgtctg attcaatgtc gccatcagct gaccgttggc gagagccaaa
    24841 tcgtacagcg gtgcctggct ttcatcttca atatcaggat caaacatgcg cgacttgagc
    24901 tcaagataac gcgccagttg ttcatagcaa cgcgctaggt tgtcctgcag cgggcggacc
    24961 gggaacagca gatgaccaat aagtgtcagg acgttgtacc agacggcacc ggccagcaga
    25021 tacatcggct gctgatacca gtgctcatac agtgatgttc ccaacatagt gtaaatggcg
    25081 atcagcaatg caccgaaggc aattgttgca tagcgttgac ccagaccgcc gagcaaaatg
    25141 aagccgctgg tagagagcgt taagccaatc gcaaatagcc aaggccaggg aaacagcaat
    25201 tctactgagg ccgaggcgat aaaaaagcag aacagcgtaa tgatgaggtt acgcaaacgt
    25261 cccgccagtc ggtcatcgag atcggtcagc gccgctgcca ccatccccag cgtcagcgga
    25321 atcgtcagtt ttacatcacc cagccaccac ggaaacgctg tggttccaca aagcgcaata
    25381 aaaatacgcg cgtaatacag ccaggcgctg ttccaggtat agcgtttgag caaaggactt
    25441 agcataaagg ccatattatt ggattattca aaacgacgac gtgcattggc ttcacgcgca
    25501 gcttgcgctg tttctaccga tgccacgcga cgaccgaccg gccatagtgc aatagcggca
    25561 attttaaagt tcgcaatacc gacaggaatg ccaatgatgg aaatacattg tgcgatgccc
    25621 gttgcaatgt gcatcaggca taaccaccag ccaaagaaaa tcagccagaa aatattcaat
    25681 accgtaccgc cagtattcag cagcacattt ttgccagccg ggttcagttc atcgacatga
    25741 atagcttcat tgccataagg caccagagac agtttagtga tctcccagca ggatcgtgtc
    25801 agcggtaagg taaaaatcag cacaatactg accagagtcg ccaacagcca gcccagagtg
    25861 gtggcaaatc cgccaagcac aaagttcaga atgttcaaaa cggtacgcat aaaacctcgc
    25921 tctactgtgg ttttcagtaa tgggcggcaa ttgtaacgtt tttttgggct ggagcacgtt
    25981 ttctctgacg gttacactga taagaaataa tttcgtgtgg atctacagag tcatggaact
    26041 gaaagcgaca acgcttggaa aacgtctggc acagcaccct tacgatcggg cggtgatcct
    26101 caatgccggg attaaagtct ccggcgatcg ccacgaatac cttattcctt tcaatcaatt
    26161 actggcgatt cactgtaagc gcggtctggt atggggcgag ctggaatttg tactgccgga
    26221 cgaaaaagtg gtgcgtctgc acggcaccga atggggcgag acgcagcgtt tttaccatca
    26281 tcttgatgct cactggcggc ggtggagtgg cgagatgagc gaaattgcgt ctggtgtttt
    26341 acgccagcaa ctggatttga ttgccacgcg cactggagaa aataaatggc tgacgcgtga
    26401 gcaaacctct ggcgttcagc aacaaatccg ccaggctttg ttggcgttgc cgttgccggt
    26461 taaccgactg gaagaattcg ataactgccg tgaggcgtgg cgtaaatgtc aggcctggtt
    26521 gaaagatatt gaaagcgctc ggttgcagca taaccaggcg tataccgaag ccatgcttac
    26581 cgagtatgcg gattttttcc gccaggtcga atcttcaccg ctgaatccgg cgcaggccag
    26641 ggcagtcgtt aatggcgagc attctctgtt agtgctggca ggtgcaggaa gcggaaaaac
    26701 gtcggtgctg gtggcccgtg caggctggtt gctggcgcgt ggtgaagcgt cccctgagca
    26761 aattttattg ctggcgtttg gtcgcaaagc cgctgaagag atggacgagc gtattcgcga
    26821 acggctacat accgaagaca ttaccgcacg cacgtttcat gcgctggcgc tgcatattat
    26881 tcagcagggc agcaaaaaag ttccgatagt cagcaaactg gaaaatgata ccgctgcccg
    26941 tcatgaactc tttattgctg agtggcgcaa gcaatgcagc gaaaagaaag cgcaggcgaa
    27001 gggctggcgg caatggctga cggaagaaat gcagtggtca gtgccagaag gtaacttctg
    27061 ggatgatgaa aaattacagc gtcgccttgc ctctcgcctc gatcgctggg taagtctgat
    27121 gcggatgcac ggtggtgcac aggcagaaat gattgccagt gcacccgaag agattcgcga
    27181 tctgttcagt aaacgtatca agttgatgcc cccgttatta aaagcctgga aaggtgcgct
    27241 gaaggcagaa aacgctgtcg atttttcggg ccttattcat caggcgattg tgattctgga
    27301 gaaaggccgc tttatcagcc cgtggaagca tattctggtt gatgaatttc aggatatctc
    27361 gccgcagcgg gcagcgttgt tagcggcatt acgcaagcaa aacagtcaga cgacgttgtt
    27421 cgccgttggt gatgactggc aggcgattta ccgattcagc ggtgcgcaaa tgtcgctcac
    27481 caccgctttc catgaaaact ttggtgaagg cgaacgttgt gatttagaca cgacttacca
    27541 ttttaacagt cgtatcggta aggtggcaaa ccgttttatt cagcagaacc caggccaact
    27601 gaaaaagccg ctaaacagct taaccaatgg agacaaaaaa gccgtcacgt tattggatga
    27661 gagtcaactt gacgctttgc tggataagct ctctggttat gccaaaccgg aagagcgcat
    27721 tctgatcctg gcgcgttacc atcacatgag gcctgccagc ctggaaaaag cggcaacacg
    27781 ctggccgaag ttgcaaatcg actttatgac cattcatgcc agcaaagggc aacaggcgga
    27841 ttacgtcatc atcgttggct tgcaggaggg aagtgatggt tttccggctg cggcgcggga
    27901 gtcgattatg gaagaggcgc tactgccacc ggttgaggat ttcccggacg ctgaagaacg
    27961 gcggttaatg tacgtggcgc tgacccgggc acgccatcgg gtatgggcac tgtttaacaa
    28021 agagaatccc tctccctttg tggaaatact gaaaaatctg gatgtgccgg tggcgagaaa
    28081 accgtaagaa acaggtggcg tttgccacct gtgcaatatt acttcagacg gtccgcgaga
    28141 taacgctgat aatcggggat cagaatatcg accgcgtcgt tgaaatgcgg cgactggatt
    28201 atgaagtctg ccgttgccac gttggtggcg accggaatgt tccataccgt cgccagacgc
    28261 agcaaggctt tcacgtcagg atcgtgcggc acggcattta gtggatccca gaagaaaatc
    28321 aatacatcaa ttttcccttc tgagatcaat gcgccaacct gctggtcacc ccccattggg
    28381 ccactcaaca tcgcgttgac gttcatgccg gtcgcgcggg aaattaagtt accggtagtg
    28441 cctgttgcat acagtacgtg ttgttccagt aacggttgat gccgttccac ccagctcatc
    28501 agcatttgtt tgcagtgatc gtgtgccacc agcgcaatat gtttccgcgc aggtaaagtg
    28561 cgagtcgtca gttccataat gtacatccgt agttaacttt cctacagatt actgtaagca
    28621 cttatcgctg caagataaag accgaaaaag cctgcgcaca ggcacaaaaa tctcaggaag
    28681 atggttgttt ttccgcccat tgcaggaaag tatttcgcgt ttgtgggtca gccagtttaa
    28741 accaatactt cagccgttgt tctgtgagca cctgagactg cggtggaata gcatccagct
    28801 cggaaacacc cgaaagcagc gtactgtcat ctgccatcat cgtggcaaat tgcggtagtg
    28861 aagcgcgttt cgcggatttg ttatagcgtt caacctcgac ctcataatca atcgtttttg
    28921 ccgttgaggt aatggcgaga atatccagct ttaccggaat cggcgtcgca tcgccatcca
    28981 acaattcaag gcgcggcgcg gcatcaaaat ggttagcttc ctgctcattc tccaggcgag
    29041 gcaggcgaaa attgacctgg ttgatgagct gggtattaaa actgaccacc agcggtgggg
    29101 agatatacag ccgttcttca ctattggaaa gatgaatcgt cttctcaacg cgaaacacta
    29161 actgatgcgg tccattatcc agttcaatgc tgtccgcacc gcgcagcaga gagctggaaa
    29221 ccttcttgcc gtcgagtacc agaagatcga catcggttga aagccgcagc gtggtggcaa
    29281 aaacggatac cggcaaacat aatgcaatca aggtggtcac gatgccggtt ttcataggta
    29341 gctcctgtca aaagaccgcc cgaataataa tgtgtcaaaa tttttcttta atcatactta
    29401 ctaacatata gacatatttc ccgcttttgc tctcattcat tcgtattagc tgcatggttg
    29461 gcatgtcggc tttgtcgtac actttgttaa acagtctgga ggaaataatg aaagaaaccg
    29521 atattgcagg cattttaacg tccactcaca ccattgcgct ggtgggggca agcgacaaac
    29581 ccgatcgtcc cagctatcgc gtgatgaaat atctactcga ccaagggtat cacgtcattc
    29641 cggtttcgcc aaaagttgcc gacaaaacgc tgctgggcca gcaggggtat ggcacgctgg
    29701 cagacgttcc ggaaaaggtc gatatggtcg atgttttccg taattcagaa gcggcgtggg
    29761 gcgtggcaca ggaagctatt gccattggcg cgaaaaccct ctggatgcaa ctgggggtga
    29821 ttaatgagca agcggcagta ctggcacggg atgccgggtt gaatgtggtg atggatcgct
    29881 gcccggctat tgagatccct cgcctgggcc tggccaaata aaaaatcccc ggaaggcaaa
    29941 aaccttccgg ggatttgttc agggattagt tacgcagacg cggggcctgg agttgtttgc
    30001 ggatggtctg cgccagctca tccatggatg gctgttcagg atgttcatcc tgcaattcgc
    30061 tacttagctg ggcttcagcc aggtaggtat gaaccggtag gccgttatcg tcctccatca
    30121 ccacgtgata ccacggagcg gcgcgaagct cgtcattcac cgctagctca tcaggcgacg
    30181 gttcagagag cgaataaacc gggtcgatat ccacgaccac tccgagataa cctaacaggg
    30241 aatggcggac ctgctggccg ataccgaatt tgctggcaat catagtcacc tcccgggaaa
    30301 tctttacctt tgatataagg gtaaaattcc acatttcaag ttacatgacg cgacaggcaa
    30361 accctttcag atatagccct tccgggtagg tagcgatcac cggatgatcg gctgcctgac
    30421 ggaactgctc tataaattgt acatcacggc cggcatcaat tgcggcatcc gcgatgattt
    30481 tctgaaataa atcgctggtc atcagaccgg aacaggagaa agtcaggaga ataccgcctt
    30541 cattcagcaa ctgaatcgcc agcatgttga tatctttata gccccgacac gcgcccatca
    30601 actggctttt attctcaaca aacttcggcg ggtccatcac gataacgtca aatttttcac
    30661 cgcgatcgcg ataagtacgc agcaatttaa agacatcatc acggacaaac tcagccttgc
    30721 tcagatccag tttgttcagc tcaacgttct gccgtgcaat atccagcgct tcctgggagg
    30781 tatcaacgct gacaacctgg ctgcaaccgc ccatcagtgc cgatacggcg aaaccaccgg
    30841 tataggagaa acagttcagc acacgtttat tttcaacgta gcggcgggta gccaggcggc
    30901 tgtctcgctg gtccaggtag tagcccgttt tgtgtccgtg ctgaatatcc accagcagct
    30961 tcatgccgtg ttcttcaatc ggcagcaggg caggcggcaa ctcgccggtg acgaggccct
    31021 gggtcagctc catcccttct tttttacgta ccgtaacatc gctgcgatcg taaatcgcac
    31081 attccgggta cagcgtttgc agggcactaa ttaatgccgt gcgctgatat tctgcgccag
    31141 cactcagcag ttgcagcacc agaaaattac cgaaacgatc gatagtaata cccggcaggc
    31201 catcagattc tccggcgatt aaacgatagc tgtcgaggcc atctttttgc gccagccagt
    31261 cacgccattt ttgtgcttgt tgcaaacggc gggaaaaaaa agcaatgtcg atagactcag
    31321 acgggtcaaa cgtccagacg cgcgcccgga tttgcgaagc tggtgaataa gcgccgcgtg
    31381 ctaaccattt tccctgatga tcaacaatat cgatggtttc accgaggctg gctttacctt
    31441 ccatgcgggc aacggccccg gaaaagaccc acggatggcg acgaagtaat gatttttcgc
    31501 gccctttggc taacactaaa cgtacactca taatttactt ttctgtcgat gcaaagaaat
    31561 gggcgtcatt gtccggagtt ttccatggat ttgcaacgcg tccattaagg ataaggagag
    31621 cagcaatgtc gaaagtctgc ataattgcct gggtttacgg gcgagttcag ggcgtaggat
    31681 ttcgctacac cacacagtac gaagcgaaaa gactgggttt aaccgggtac gccaaaaatc
    31741 ttgacgatgg cagcgtggaa atggttgctt gcggtgaaga agggcaggta gaaaaattaa
    31801 tgcagtggtt aaagagtggc ggcccgcgtt ctgcgcgtgt agaacgggtg ctcagcgagc
    31861 cgcatcatcc ctcggaggaa ttaaccgatt ttcgtatccg ttaaatacat tttaccggtt
    31921 ttggcaggcc agcaattttg gtggcttgct ttgccggacc tttcggaaac agtcggtata
    31981 aatagcggct gttacctttt tcttcgccaa atttattcgc catcgctttt accagcatac
    32041 gaatcgccgg agaagtattg aattccagat agaaatcacg cacaaaacgc accacttccc
    32101 agtgttctgg cgacagcgaa atcccttcgt tctctgcaat caccactgcc agcggctcac
    32161 tccactggct gctttctttg agatagcctt cggtatccgt ttctatctct ttaccttcga
    32221 agatcagcat aattattact acattaatca gactggcggc agtgtaacaa aaaacaaagc
    32281 cccgcataaa gcgaggctat gaaagtgtta gcgggtgaga ttaatcgcgg ctggcgaagc
    32341 ccagaatgct cagcaggctg acgaagatgt tgtacagcga aacatatagg ctaaccgtgg
    32401 cacgaatata gttcgtttca ccgccatgaa tgatgttgct ggtttcaaac aaaatagcgc
    32461 cagaggagat caaaatgaag accgcgctga tcgccagatg cagagcaggc agctgcagga
    32521 agatattagc aaccatacca atcagcacca ccacaatacc cgccatcagc ataccgccga
    32581 ggaacgacat atctttgcgg gtggtcagca catatgcaga gcagcagaag aacactaacg
    32641 ccgttccgcc cagtgccata gcgattacgt cacccattcc ggcagacaga taggtgttca
    32701 gaattggtcc gaggatataa cccagaaaac cggtaaaggc gaatgcggag ataatcccgg
    32761 tcggcttatt cgccgtttta taggtcagga acatcaaacc atacataccc accagcgtca
    32821 gaatcagacc cggagatggc agcatcagca ccgtactggc agttgcggta atcgccgaaa
    32881 aggccagtgt caggctcagc agaaaatagg tattacgcag caccttatgg gtgctaagca
    32941 gcgatgtacg gtcatgtgaa gaactaacta tacgatccat tgagtcactc tctatgacag
    33001 atgtaattaa ttaagcagca taatgataat gcgtaagggc acccagaagt tttacccatc
    33061 tttacgcatt tgatctggaa caggtttaac agcggattat caggtcatta agcaaatata
    33121 acgccctgag aatttcaaca ggcaaaagaa aaaggggtta gcatttagct aaccccttat
    33181 cttatttggc ggaagcgcag agattcgaac tctggaaccc tttcgggtcg ccggttttca
    33241 agaccggtgc cttcaaccgc tcggccacac ttccggaatg acgcgcacta taaacatccc
    33301 gatgcggcgt gtaaacccct aatttgtttg tttgcctgaa aaacagccaa aagtgcattg
    33361 atagcgtgaa ataacagcag attgatcatt tcatcaccat gaattccttc tcttttactc
    33421 gtttagcaac tggcaaaaca tccccaccgc ccggcaaaaa gaaaaatagg tccattttta
    33481 tcgctaaaag ataaacccac acagtttgta ttgttttgtg caaaagtttc actacgcttt
    33541 attaacatta ctttctggcg acgtgcgcca gtgcagaagg atgagctttc gttttcagca
    33601 tctcacgtga agcgatggtt tgccttgcta cagggacgtc gcttgccgac catgtgcgcc
    33661 cggtgtcctg ccggtgtcgc aaggagaaga gacgtgcgat atgaataacg aggaaacatt
    33721 ttaccaggct atgcggcgtc agggcgttac ccggcgcagc tttctcaaat attgtagtct
    33781 ggctgccacg tcgctgggat taggcgcggg aatggcacca aagattgcct gggcgctgga
    33841 gaataaaccg cgcattccgg tggtatggat ccacggtctg gaatgcacct gctgtaccga
    33901 atcttttatc cgctccgctc acccgctggc aaaggacgtc atcctttccc ttattttcct
    33961 cgattacgac gatactttga tggctgccgc cggaacccag gcggaagaag tctttgaaga
    34021 catcatcacg caatacaatg gcaaatatat cctcgcagta gaaggtaatc cgccgctggg
    34081 cgagcagggg atgttctgta tcagcagcgg tcgaccgttt attgagaaac tcaaacgtgc
    34141 cgctgccgga gccagcgcga ttatcgcctg gggaacctgc gcgtcctggg gctgcgtgca
    34201 ggccgcgcgg cccaatccga cgcaggcaac gcctatcgac aaagtcatca ccgacaaacc
    34261 cattatcaaa gtacctggct gcccgccgat cccggatgtg atgagcgcca tcattactta
    34321 catggtgacc tttgatcgct tgccagatgt cgacagaatg ggccgtccat tgatgttcta
    34381 tggtcagcga atccacgata aatgctatcg ccgcgcccac ttcgacgccg gagagttcgt
    34441 gcagagttgg gatgatgacg ctgcccgcaa aggttactgc ctgtacaaaa tgggctgcaa
    34501 agggcctacc acctataacg cctgttcctc cacacgctgg aatgatggcg tttctttccc
    34561 aatccagtct ggtcacggct gcctgggctg tgcggaaaat ggtttctggg atcgcggttc
    34621 gttctacagc cgcgtggtcg atattccgca aatgggtact cattccaccg ccgacaccgt
    34681 cggtttaacc gcgcttggcg tggtggcagc ggctgttggt gtgcacgcag tcgccagcgc
    34741 cgttgaccag cgcagacgtc ataaccagca acctacagaa accgaacatc agccaggcaa
    34801 tgaggataaa caggcatgag cactcagtac gaaactcagg gatacaccat caataatgcc
    34861 ggacgccgct tggtggtcga cccgattacg cgcatcgaag gccacatgcg ctgcgaagtg
    34921 aatattaacg atcagaatgt gatcaccaat gccgtctcct gcggcaccat gtttcgcggg
    34981 ctggagatca tcctgcaagg gcgcgacccg cgcgatgcgt gggcgttcgt tgaacgtatc
    35041 tgcggcgtct gtactggcgt acacgccctg gcttcggttt acgccatcga agatgccatc
    35101 ggtattaaag tgccggacaa cgccaatatc atccgcaaca ttatgctggc aacgctctgg
    35161 tgccacgatc atctggtgca cttctatcag ctcgccggga tggactggat cgacgtgtta
    35221 gatgcgctga aagccgaccc gcgaaaaacc tccgaactgg cgcaaagtct ctcctcttgg
    35281 ccgaaatcat ctcctggcta tttcttcgac gtacaaaacc gcctgaagaa attcgttgaa
    35341 ggcgggcagt tggggatctt ccgcaatggc tactgggggc acccgcagta caaactgccg
    35401 ccagaagcca acctgatggg ctttgcccac tatctcgaag ctctcgattt ccagcgtgaa
    35461 attgtcaaaa tccacgcagt ctttggcggt aaaaacccgc atccaaactg gattgtcggc
    35521 gggatgcctt gcgccattaa cattgacgaa agcggcgcgg tcggggcggt caatatggaa
    35581 cgcctgaacc tggtgcagtc gattatcacc cgcacggcag acttcattaa caacgtgatg
    35641 atccccgacg ccttagccat cggtcagttc aacaaaccgt ggagcgaaat cggcacgggt
    35701 ctttctgata aatgtgtcct cagctacggc gcattcccgg atattgccaa cgactttggt
    35761 gagaaaagtc tgctgatgcc tggcggcgcg gtgattaacg gcgacttcaa caatgtgctg
    35821 ccagtggatt tggttgatcc gcagcaggtg caggagttta tcgatcacgc ctggtatcgt
    35881 tatcccaacg atcaggtcgg gcgtcatcca ttcgatggca ttaccgaccc gtggtacaac
    35941 cccggcgatg tcaaaggcag cgataccaac attcagcagt tgaatgaaca ggaacgctac
    36001 tcgtggatca aagcgccacg ctggcgcggt aacgcgatgg aagtggggcc gctggcacgc
    36061 acgttaatcg cttatcacaa aggcgatgct gcgaccgttg agtcggtcga tcgcatgatg
    36121 tcggcgttga acctgccgct ttccggtatc cagtcaacgt tgggccgcat tttgtgccgc
    36181 gcgcacgaag cgcagtgggc cgcaggtaag ttgcagtatt tcttcgacaa gctgatgacc
    36241 aacctgaaaa acggcaatct cgccactgct tccactgaaa aatgggaacc tgcaacctgg
    36301 ccgacagagt gccgtggcgt cggctttacc gaagcgccgc gcggagcgtt aggccactgg
    36361 gccgccattc gcgatggcaa gattgatctc taccagtgcg tggtgccgac cacctggaac
    36421 gccagcccgc gcgatcccaa agggcagatt ggcgcttatg aagcggcgct gatgaacacc
    36481 aaaatggcga tccccgagca accgctggag atcctgcgta ctctgcacag ctttgatccg
    36541 tgcctcgcct gttcaactca tgtgctgggc gacgacggta gcgagctgat ctccgtgcag
    36601 gtgcgttaac agcgaaggag aatcatcatg caacagaaaa gcgacaacgt tgtcagccac
    36661 tatgtctttg aagcgccagt tcgtatctgg cactggctga cggtgttatg catggcggtg
    36721 ttgatggtca ccggttactt tatcggcaag ccgctacctt ccgtcagtgg cgaggcgacg
    36781 tatctgttct atatgggtta catcaggtta attcacttca gcgccgggat gatttttacc
    36841 gtggtcttgc tgatgcggat ctactgggct tttgttggca atcgttactc ccgcgagctg
    36901 tttatcgtgc cggtatggcg taaaagctgg tggcagggcg tgtggtatga aatccgctgg
    36961 tatctgtttc tggcaaaacg tccgagtgcc gatataggcc ataaccccat cgcccaggcg
    37021 gcgatgttcg gctatttcct gatgtcggtc tttatgatca tcaccggttt tgcgctgtac
    37081 agcgaacaca gccagtacgc tatttttgcg ccgttccgtt atgtggtgga atttttctac
    37141 tggacgggtg gcaactcaat ggacattcac agctggcatc ggctggggat gtggctgatt
    37201 ggcgcgtttg tgatcggtca tgtctacatg gcgctgcgtg aagacatcat gtccgacgac
    37261 acggtgatct ccaccatggt caacggctac cgtagccaca aatttggcaa aataagtaac
    37321 aaggagcgtt catgagcgag caacgcgtgg tggtcatggg gctgggcaac ctgctgtggg
    37381 ccgatgaagg cttcggcgtg cgggtggcgg aacggttgta tgcccattac cactggcccg
    37441 agtatgtgga gattgtcgat ggcggtactc agggactgaa cttgctgggg tatgtcgaaa
    37501 gcgccagcca tctgttgatt ctcgatgcca ttgactacgg gctggaacct ggaacgctgc
    37561 gaacctatgc cggagaacgc attccggctt atctaagcgc gaagaaaatg agcctgcacc
    37621 agaacagttt ctccgaagtg ctggcgctgg cagatatccg cggacatctg ccagcacata
    37681 ttgccctcgt tggtctgcaa cccgcaatgc tcgacgacta cggcggcagc ctgagcgaac
    37741 tggcacggga gcaactgccc gctgcggaac aatcggcgct ggtgcagttg gctgcgtggg
    37801 gaattgtgcc gcaaccggct aatgaatcgc gctgtctcaa ttatgactgt ctgtcgatgg
    37861 aaaattacga aggcgttcgc ttgcgccagt accggatgac acaggaggag cagggatgag
    37921 caacaacacg ccatttgatg cgttgtggca acgaatgctg gcgcgcggct ggacgccggt
    37981 cagtgaatcc cgtcttgacg actggcttac gcaagcgcca gacggcgtgg tgttattaag
    38041 cagtgacccg aaacgcacgc cagaggtcag cgataatccg gtaatgattg gcgaattact
    38101 gctcgagttt cccgactata catggcaggt ggcgattgct gatcttgagc agagcgaagc
    38161 catcggcgat cgctttggcg tctttcgctt tcccgccact ttagtgttta ccggcggaaa
    38221 ctatcgcggc gtgctgaatg gtattcaccc gtgggcggaa ctgataaacc tgatgcgcgg
    38281 gcttgtcgaa ccgcagcagg agcgtgcctc atgagcgaaa cttttttcca tctgctgggg
    38341 ccaggaacgc aaccgaacga tgacagtttc agcatgaatc cactgccgat cacctgtcag
    38401 gtgaatgatg aaccgagtat ggcggccctg gagcaatgta ctcacagccc gcaggtgatt
    38461 gcgctgttaa acgagttaca acatcaacta agcgaacgcc aaccgccgtt gggcgaggtg
    38521 ctggcagtcg atctgttaaa tctcaacgcc gacgatcgtc actttatcaa tacgcttctc
    38581 ggggaagggg aagtgtcagt gcgcattcag caggctgacg acagtgaaag tgaaatacag
    38641 gaggcgatct tctgcggatt atggcgggtg cgcagacgtc gcggcgaaaa gttgctggag
    38701 gacaaactgg aggccggctg cgcgccgctg gcgttgtggc aggcggccac gcaaaatctc
    38761 ttgccgacag attcgctgtt accgccgccc attgatggcc tgatgaatgg cctaccgttg
    38821 gcgcatgagt tactggcgca tgtacgtaac cccgacgcgc agccgcacag cattaatctg
    38881 acgcaattac ccatcagcga ggctgatcgg ctttttctct cgcgtctctg tgggccggga
    38941 aatattcaga ttcgtaccat tggctatggc gagagctata tcaacgccac ggggttacgc
    39001 catgtctggc atttacgctg tacggacacc ttaaaaggcc ctttactgga aagttatgaa
    39061 atctgcccaa taccggaagt ggtgctggca gcgccagaag atttggtcga ctctgcgcag
    39121 cggcttagcg aggtatgtca gtggctggcg gaagctgcac cgacgtaaaa agacggtaag
    39181 tatcgctttc agtcttatga atatcgcaat cggcgaatac ctctggtcgt agagtttcag
    39241 gataaagagg gagatctacc attatcgggt tatttttctc tcttcgccta caggagtgcg
    39301 catgtgggat gtcattgatt tatcgcgctg gcagtttgct ctgaccgcgc tgtatcactt
    39361 tttatttgta ccccttaccc tggggctgat ttttttgctg gctatcatgg aaaccattta
    39421 cgtggtcacc ggcaaaacaa tctaccgcga tatgacgcgc ttctggggta agctcttcgg
    39481 tatcaacttt gctcttggcg tggctaccgg cctgactatg gagtttcagt ttggtactaa
    39541 ctggtcattt tattccaact atgtgggcga tatttttggc gcaccgctgg cgatggaagc
    39601 attaatggcc ttcttcctcg aatccacctt tgtcggactg ttcttcttcg gctggcagcg
    39661 gctgaataaa taccagcacc tgctggtgac gtggctggtg gcgttcggtt caaatctctc
    39721 tgcattgtgg atattgaatg ccaacggttg gatgcaatac ccgaccggtg cgcattttga
    39781 tatcgacacc ctgcgtatgg agatgaccag cttcagcgag ctggtcttta acccggtcag
    39841 ccaggtgaaa tttgtgcaca ccgtaatggc gggctacgtg accgggggca tgtttattat
    39901 ggcgatcagc gcctggtatt tactgcgcgg acgggagcgc gatgtcgcat tacgctcgtt
    39961 tgccatcggt tccgtcttcg gtactctggc gattatcggt accctgcaac tcggagacag
    40021 ttctgcgtat gaagtcgcgc aagtacaacc ggtaaaactg gcggcgatgg aaggggagtg
    40081 gcaaacggaa cctgctcctg caccgttcca tgtggttgcc tggccggaac aggatcaaga
    40141 gcgtaacgcc tttgccatca aaattcccgc gctgttaggg atcctcgcca ctcactcatt
    40201 agataaaccc gtgccgggtc tgaagaattt gatggctgaa acctacccac gcttgcaacg
    40261 cggacgtatg gcctggctgt taatgcagga aatatcgcaa ggcaatcgtg agccgcatgt
    40321 gttgcaggca ttccgggaac tggaaggtga cctgggctac ggcatgttgc tctcccgcta
    40381 tgcgccggat atgaatcatg tcacagccgc acagtaccag gcggcgatgc gtggtgcaat
    40441 acctcaggtt gcgccggtat tctggagttt ccgcatcatg gtgggctgtg gttccctgct
    40501 gctactggtg atgctgattg cgcttgtcca gacgctgcgt ggcaaaatcg accagcatcg
    40561 ctgggtgctg aaaatggcgc tctggagttt gccgttgccg tggattgcga ttgaagccgg
    40621 gtggtttatg accgagtttg gtcgtcagcc gtgggcgata caggacatct taccgacata
    40681 ctccgcgcac tccgctttaa ccacaggaca actggctttc tcactgatca tgatcgtagg
    40741 gctttacacc ctgttcttaa tcgccgaagt ctacctgatg cagaaatatg cccgtctggg
    40801 gccgagcgcg atgcagagtg aacaaccgac gcagcaacag gggtaaagga gaaaatcatg
    40861 tttgattatg aaacattgcg cttcatctgg tggctgctga ttggcgtgat cctggtggtc
    40921 tttatgatct ccgacggatt tgacatgggg atcggctgtt tgctgccgct ggtggcgcgt
    40981 aatgatgatg aacgccggat agtgattaat agcgttggtg cgcactggga aggcaatcag
    41041 gtctggttga tcctcgcagg tggggcatta tttgccgcct ggcccagagt gtatgcagcg
    41101 gcgttttccg gcttttatgt ggcgatgatc ctggtgctgt gctcgctgtt cttccgcccg
    41161 ctggcctttg attatcgcgg aaaaatcgcc gatgcacgct ggcgtaaaat gtgggatgcc
    41221 ggtctgggca tcggcagtct ggtgccgccg gtagtcttcg gtatcgcctt cggcaacttg
    41281 ttgctcggcg tgccgtttgc cttcacgccg caattacgcg tggagtatct cggcagcttc
    41341 tggcaactgc tgacgccatt ccctttattg tgcggattgc tcagccttgg gatggtgatt
    41401 ttgcaaggtg gcgtctggtt acaactgaaa actgttggtg tgattcatct gcgttcacaa
    41461 ctggcgacca aacgcgccgc actactggtg atgctgtgct ttttgctggc gggttactgg
    41521 ctgtgggtcg gtattgatgg ctttgtactg ctcgcccagg atgctaacgg tccttccaat
    41581 ccgttaatga aactggtggc agtgctacct ggtgcctgga tgaataattt cgtcgaatcg
    41641 cccgttttgt ggatcttccc gctgctgggg ttcttttgcc cattgctgac ggtgatggcg
    41701 atttatcgtg gtcgcccggg gtggggattt ttgatggcgt cattgatgca atttggcgtg
    41761 attttcacgg caggcatcac gctgttcccc ttcgtcatgc cgtcaagcgt gagtccgatc
    41821 tccagcctga cgttgtggga cagcacttcc agtcagctga cgctgagcat tatgttggta
    41881 atcgtgctga tatttttgcc tattgtgttg ctctacactc tctggagcta ctacaaaatg
    41941 tggggacgca tgacgacaga aactctccgc cgtaacgaaa acgagctgta ctaaggagca
    42001 ggaacaatgt ggtatttact ttggttcgtc ggcattttgt tgatgtgttc gctctccacc
    42061 cttgtgttgg tatggctgga cccgcgtctg aaaagttaac gaacgtaagc ctgatgcggc
    42121 gcattagcgt cgcatcaggc aataatgtcg gatatgaaaa gcggaaacat atcgatgaaa
    42181 gcgatcttaa tcccattttt atctcttttg attccgttaa ccccgcaatc tgcattcgct
    42241 cagagtgagc cggagctgaa gctggaaagt gtggtgattg tcagtcgtca tggtgtgcgt
    42301 gccccaacca aggccacgca actgatgcag gatgtcaccc cagacgcatg gccaacctgg
    42361 ccggtaaaac tgggttggct gacaccgcgc ggtggtgagc taatcgccta tctcggacat
    42421 taccaacgcc agcgtctggt agccgacgga ttgctggcga aaaagggctg cccgcagtct
    42481 ggtcaggtcg cgattattgc tgatgtcgac gagcgtaccc gtaaaacagg cgaagccttc
    42541 gccgccgggc tggcacctga ctgtgcaata accgtacata cccaggcaga tacgtccagt
    42601 cccgatccgt tatttaatcc tctaaaaact ggcgtttgcc aactggataa cgcgaacgtg
    42661 actgacgcga tcctcagcag ggcaggaggg tcaattgctg actttaccgg gcatcggcaa
    42721 acggcgtttc gcgaactgga acgggtgctt aatttcccgc aatcaaactt gagccttaac
    42781 cgtgagaaac aggacgaaag ctgttcatta acgcaggcat taccatcgga actcaaggtg
    42841 agcgccgaca atgtctcatt aaccggtgcg gtaagcctcg catcaatgct gacggaaata
    42901 tttctcctgc aacaagcaca gggaatgccg gagccggggt ggggaaggat tactgattca
    42961 caccagtgga acacgttgct aagcctgcat aacgcgcagt tttatttgct gcaacgcaca
    43021 ccagaggttg ctcgcagtcg cgccaccccg ttgttggaat tgatcatgac agcgttgacg
    43081 ccccatccac cgcaaaaaca ggcgtatggc gtgacattac ctacttcagt gctgtttatc
    43141 gccggacacg atactaatct ggcaaatctc ggcggcgcac tggagctcaa ctggacgctt
    43201 ccaggtcagc cggataacac gccgccaggt ggtgaactgg tgtttgaacg ctggcgtcgg
    43261 cttagcgata acagccagtg gattcaggtt tcgctggtct tccagacttt acagcagatg
    43321 cgtgataaaa cgccgctgtc attaaatacg ccgcccggag aggtgaaact gaccctggca
    43381 ggatgtgaag agcgaaatgc gcagggcatg tgttcgttgg caggttttac gcaaatcgtg
    43441 aatgaagcac gcataccggc gtgcagtttg taatgcataa aaaagagcat tcagttacct
    43501 gaatgctctg aggctgatga caaacgaaga actgtctaat gcgtagaccg gaaaaggcgt
    43561 tcacgccgca tccggtcact ttaccttcag ttttactctt tctcggagta actataaccg
    43621 taatagttat agccgtaact gtaagcggtg ctggcgcgtt taatcacacc attgaggata
    43681 gcgcctttaa tattgacgcc tgcctgttcc agacgctgca ttgacaaact cacctctttg
    43741 gcggtgttca agccaaaacg cgcaaccagc aggctggtgc caacagaacg ccccacgacc
    43801 gcggcatcac tcaccgccag catcggcggc gtatcgacaa tcaccagatc gtaatggtcg
    43861 ttcgcccatt ccagtaattg acgcatccga tcgcgcatca gcagttcaga cgggttaggt
    43921 ggcacctgac cgcgagtaat cacatcaaag cctcctttgc caaaatgctg gatcactttg
    43981 ttgagctcat ctttacctgc cagatattcc gacaagccat gttcattact cacggtaaac
    44041 aggttatgcg aataaccacg gcgtaagtcg gcatcaataa ataacacttt ttgatcggac
    44101 tgggcgatca ccgctgccag agttgaactg acaaacgttt taccactgtc tggcgtcgca
    44161 ccggtgatca tcagaatgtt attctccgtc tccatcatag cgaagtgcag actggttcgt
    44221 agcgcacgta cggcttccac agcagaatcc gccgggttat ccaccgccag gaaggggata
    44281 tttttagtac gatggcgctg ctgattagaa aataaatttt tcttacgcag acgggtacgt
    44341 ttatccagcc actcggacat tgggatagtg gcataaacgc tgatgccgtg ctcttccagt
    44401 tgttccgggg cttctacacc acgacgcaac atcgcacgcg ccagcacggc acccaccgaa
    44461 ataaacaggc caagaataaa accaagcacc acgttcaacg cttttttcgg tttcactggc
    44521 tgcggctgag tgactgccgg gtcgataatc cgcacgttac caatggcact ggatttcgaa
    44581 atactcaact cctgctggcg gttaagtaat tgcagatata ccgcacggcc cgcttctacg
    44641 tcacggctta aacgtaacac ttcctgttgg gtggaaggca ttgccgatac ccgcttattc
    44701 aggcgtttgc gttcttgctc cagcgtctgg cgtttttcca gcagcgcacg ataagttggg
    44761 tgatctttct tatacagctg ggagatctct gcctcgcgga aggtcagctc attgagttga
    44821 ttatcaacgt tcacaatctg ctcaagaacg gctttggctt ccaggttaag gtcaaccgaa
    44881 tcgcgctgct ggcgataaac gttgagtttt tcttccgcct ggtccagctc gctgcgcact
    44941 tcaggcaact gacgctgtaa gaattcaaga ctttgtgaat cctgcgccgc ctggcgagcg
    45001 atattctgtt gcaaatagtt gttagcgatg ttgttcagta tacgggtaat caactgggga
    45061 tcatcaccgg tcatggtaag ttccagcatc ccgctttctt tactgcgttc gctaacggta
    45121 aaggtttcct gcaacgcgtt aatcgcttcc agttcggtac gttggctcag gacaaactgt
    45181 gttcctggtt tggccttaat atccgcgata gtcagcgcaa cgccatcttt ttccagacgc
    45241 tggccgacca taccattgac ggtgaactct tcaccttgca gcgtatagtg gccgttttcc
    45301 ccaaccgtga gtgtcagttg ctgatcctga ccattcagtt gtggaatatg catccagctg
    45361 atcgccagct cacctggttt ctctttggtt aatctcgccc agccgcgacc cacaatcgga
    45421 aaatacttct gctcaaccat gtcgcgcaga ttcagttcag caatggtttt accgagaatc
    45481 atgcgcgatt gcagcagttg gatctccggt gcagactcgg gcgatgagtt agggatcata
    45541 tcgctcaggc cactgagaat ggcgttgccc tgtttctgct caacctggac cagagtatct
    45601 gcctgataaa ttggcgtgct taacagcgag taagcgacag cgatcagcgt gaataacgcg
    45661 gtcacgctga taataaactt acggtgatcc cataactcgc cgaccagacg aagcagatcg
    45721 atctcatttt cctgagtgct gcctagtggc gtattcatat ttttagttgt catcgtattt
    45781 tataaactca aattaccggc tgaggcgctt cgcccattcc tgactggcgc gctccaacat
    45841 accgtagaca tgttcaaatg cgtcctgact tttacgatag ggatccggga tctctttctg
    45901 ttccagccat tgcccaaaca gcattgtctt cccgcggacc tcgggagcga ttgcggtaac
    45961 ctgagcaata tgttccgact ccattgccag aatcagatcg taatttcgtg ccatctcagc
    46021 agtgagctta cgtccggcat gtccttcaag agatacgcca tgattagcgg caacatctgc
    46081 tgctgtcgca tctgcagggt gttttaccag accatgaaca cctgccgatt tgacttttac
    46141 gcctggcaga cgtttacgca gcaagcgctc gccaatgggc gaacggcaaa tgttgccggt
    46201 acaaaccacc aggattgagt taaattttag ttgggccatg tttgaatcca ccgtgaagtc
    46261 tctgtcaggt catgcacccc ggaaatcgtc ggtaccagca gagaaatcac acggttccaa
    46321 cgagccagcg gcgcagtagt gacataaaca atgtcgtaag gttcaagctg gaattccgtt
    46381 ccgagtatca ttgccgatgc gtccttcgca ttcagctgat aaatattggc gattttgcca
    46441 ttctgcttgt tttgcgttgc acgaataaca aaaatccccg tcgcatcagc gacatcctga
    46501 ttcataccct cagcgttacc cagcgcttcc gccagggtca taccgctgcg gtccattttc
    46561 agcgtgctct gtttacccac ttcacccatc acgaagactt tcagatcatc gttgcgcgga
    46621 ataaataaaa tatcccccgg gtgcagcagt ttgttctggc gcaagtcgcc acgctgcatc
    46681 agcgcataga ggttcacttt ggtctttacg ccattctggg tgagcaccac gttgcgccag
    46741 tctgcatctg cggtcagccc ccccgcggcg ttaatcgcat ccatgatggt cagaggaata
    46801 ttggtaatcg gctgctgacc cgatttgctg acttcgccgg tgacgtacgc tttttgcgat
    46861 cggaacgccg cgacgctgac atcgacctgc gggctttcaa tgactgaatc gagacgcgct
    46921 gtaatctcgt tgcgtacctg ggtaagtgtt ttcccggcca ctttcaggcg accaatatag
    46981 gggtagaaaa tcgcaccatc ggcgttaacc cagttgccgg tatcactggc gctacggtat
    47041 tgccctgcgg gggtggttag ttccgggtga tcccagaccg taaccatcaa cacatcacca
    47101 atgccgatac gatattcata gttcgcgatt tgctgctcca gctccgggtt agcctgcgac
    47161 ataatcggtt tggcgcgcag ctgatcaatc aatcctggcg tgacgggatt gatattgacc
    47221 attttgtcca ggtcatactg attgtcaggt agttcaatga catccttgtt actggtcgat
    47281 aaattctgac caggaacaag ggtacatgct gtcaaagaca gaacagccaa tgtcagtacc
    47341 gaaaacttaa aaatgttctt tttcattggt ttatatttat cagtcaatgt aatgttatga
    47401 attacgtcag gttattgtcc aaccggtact tctcgctctg ccgtcattgg atagagctgg
    47461 tatttgcgtg acagcatttg tccaccatca cgcgtcaatg gtgtccacga aaccaccgcg
    47521 cggttgcggt taggtccaat ggtcatcaag tcgaacggaa tcgagatata aaaaccttta
    47581 ctaaagccgc cttcgccgta gtcatcttta gacacgttac tgattgccgc ccatacccct
    47641 accgccacgc cgctgtcaaa gcgtttggcg acgtcgatcg ttgcgccttt atcttttgcc
    47701 agatattgcc caacgctaag tttcatcagt atgccattga gcgtcggtgg gttccagtaa
    47761 gccgtcacga aaccagttgg cgtggaataa tcggtgaagc gcatcatgtt gtcccagtca
    47821 cgctgcttca cgtagttaac gtccacaccc agcgcccagt tggcatctag cgggcgataa
    47881 agcagctcgg aaccgacacc ggcatacatc gtttccagat aaccgccata cacctggcca
    47941 tagaaaccat tgcctaagtc agcaaaatag ttcgcctgca agttgttgag ataaacgtca
    48001 ttgcgaacgt agtcacggat atgcgtgcgc acgcggggca gggtagagtc cgcgggcaac
    48061 agcgaagact taaacttgtc gtagttgttg taaatattgg tgaaaatacc gccatcaagc
    48121 agcaggtggt cggtaaacca gtagcgggca ctggacatca gccccagctg gaacatatag
    48181 aaatcttccg ggccgcccag cgactgtgaa agtgttgggt tgaaagagta gctaaagcga
    48241 tcttcacgaa tacggtagcc ccgaccaaag gcagaaagat cttctgcttc aacacgttgt
    48301 tgttgaagtt gctctgattg accaggcgct gtaccagcca gctgtttgcg caggctggct
    48361 acgtcggttt cggtagtcac catcgccata tgctcgcgct tttgcgtcac gctaatcttc
    48421 tcaacgcctt gcggcaggtt attcaccaga atccggttgg cacgatcgac cgcttcgcga
    48481 gaatcacggt atttgtattg ttgaccagac atatacagcg tcttatcgcg cagctgaatt
    48541 tccggtgctt caaaacctgc gttgtacttc agcgcggtaa gttggttcgc tactgtggtg
    48601 tactgcaatc cttcagattc aggcgcaggt tgatatgccg gttttggcgt atcgcgcagg
    48661 gcagggcgca gatcgttgaa attggtccgt aaagtgaaac caaacatcaa cgtgttaccg
    48721 cgttcataac tcaggttgag gtctgcccaa ctggcagcgc gataaactgc accgacgttg
    48781 aaatggcttg cctgaggcag tttgccagcg aaatcattct ggtaattgtt gccgtcgtat
    48841 tcgagtttca gacgcagggg attccacggc gtttgatact caatgccgcc aaagatggaa
    48901 gccgggccac gaaagatatc gctaaagctg atatcgcccg catcgtgaga ctctgcgcga
    48961 tgacaatatt tatcgctcac ccggcaaaac gggttggtaa tattgcccgc attaccggcg
    49021 tagccccatg ccatcccgag ggtgaaatca aatggccccg cttgcttgct ggccaccaga
    49081 tactcaccgt caaacagacc cgtaccagca atatcacgtt taccaaacgc cacttgcggt
    49141 agccagtaac cttcttccca caggcgaagt ttaaaatcga atgatttgtc tttgtatgac
    49201 tgatcgccgc tgaaatcttc ccactggcta tatttgcgtg tgcgcacatc cgtataacga
    49261 atggtgcctt ccagccatgg gaacagcgcc acggaggtgg agtagaaccg gtattgatcg
    49321 ttatcccggt agttgacgct gaattcacct tccggtgcga tgcgcgcatt tggcatctgc
    49381 aacaatcctg tgccgccaaa gtctgattgc gacgaaccca gcggatccgg gtaggttaat
    49441 acttcagcat gacaggcact ggagacggca atggccaggc agcttaaaag ataagaattc
    49501 ttcttcatca gtcaggaaca cgttgcgtta aaacagacac aatctggtca tttaaatcag
    49561 catatttttc gggcagtaca tgcgcagaaa agcccaacca aagctggctg ccaggcggtg
    49621 gttccacatg tcttttattc cacagggcaa caggggcgac gacagtctca ccctcaggcg
    49681 taatcaccat aacgttattc ttgtccgcgc ctgcaaggcg ggggtgatct tgcagataat
    49741 cggtaacgct acggcctgcc tgccagggca attgcccagc cccagaaacc gcacccagca
    49801 gagtaatagt caccggacgc tgtacggtat agagcgtata gtccccgacc aacgggggat
    49861 tgctgttctc atccactcgt acaaaatcag gggccagttt gaccggtaag cgaccagtga
    49921 tattgagatt gagtaactgc tggcgcacgg atttaatcgt tgccgccaca tcgtcgtcag
    49981 cttctgcttc ccaggaagca agctgtgcca tgacatgttg gtagtcttta agcgctttag
    50041 ctttcgccgc agagtcggtc agcaaggcac caggccacca gaggcgatcg cgcagttgcg
    50101 gttgtgtcac caactggaca acattttcca cggggccaac ggaaagtgtc tgttgttcgc
    50161 caggcagata aatagtcacc gttccttgcg caaaggcatg gggtgtcatt acgtaaagta
    50221 cgctggcaat gaaatacgac tgtaatttat tcatggtgcg ggtttaagaa acgtcatttc
    50281 tacgggaata acccctgcgc ctaacatttg ccgactttga cgaacctggc cagtagccga
    50341 atcgacccag aatgtgtttt gccactgttt ttctggccgc gtggaagtca cctcttcctg
    50401 ccagacatta cacagcacat tgcgacccgc aatattcagc gtctctaatc cagcaaagga
    50461 aaaagtagaa ctcagggtcg cagagcgaaa atggttgtct tcactccaga gaatatcgcg
    50521 cgtccagcgg ctgccatctt ttattgccag cgcgttacgc agagggtcct gcccggaatt
    50581 tgtcacttcc agcagattat tattaagttt gacggttttt aaaagacgtc cattgtgggt
    50641 aaccagcatg gcgttatcct gggataacca tttgctttgt tcttgttcta tatatcccag
    50701 taccacaaag attcgttgcc cttcattaag gcgtaaatac atcgtggaat aaggcaacgc
    50761 ctggatctgc tgatccgcta cggtgatatc ctgattatcg aaaaggctgg cgcgaaatgt
    50821 atcgaccata ctttgctggc tgtgcgtaca tcccgcaaga aatagtgcga aaatcgataa
    50881 aataagaggg cgcaccttta atccttgaaa ggttaattaa aaaaatgcaa atctctaaag
    50941 cccggtacga atatcgcaac cgggtatcat ttaactttaa tttcgacgcg ttaaagcagt
    51001 attagcgtgt agtggacgtg gtggttgagg tgttatgaga accgccatcg tcactgtcat
    51061 ttgctgcaac aactgccaac gtcgccacac caacagccgt tgccacaccg acaactgtcg
    51121 ccgtgccgac agcgccagca gccacgccac cagtggtagt agcagtcgtg gttgcgccgg
    51181 tagtggtcgt tgtggtgcca gtagtacccg tcgttgcctc ggtcccgttt gttgcttcag
    51241 gggcagcaaa cgcagctggc gtcgtcaaca tgaaggccat aaggattgca gaaagcttgt
    51301 gtttcataac ttttccttta ttcatcgcat ggacaatacg tacgcttgag atcaggattg
    51361 tctactttga gtataacatc cttgtgaaat ctccctttcc tcataccgct tgcactatat
    51421 actgcgggta ggaaaggcgc gcagagggaa atataagatt gttaactatc cccctctgga
    51481 aatacgactt gtgagcataa gataaatctt agcaaaatac aaattaaaga taaggaaatt
    51541 gttacgaaag ctattaatta ttgttggtaa tatagtttca agtggtacta taactggctg
    51601 ttaaatggca tttataacta ttaggtgcag agatattcgc ttaaatggat tagtttcttg
    51661 gtggaaaagt aactgatgtt ataatatatg atgttgacta ttgaactatt acaataaaac
    51721 cagtcagctt taaacaagca gcgtcatatt aagagagata aacatttgcc gctgttggtc
    51781 ctcgcaggcc atttacgcgg caaaattcca cacgtaatcc tggtataagc acttctgcgt
    51841 cgcggggagt gaatgcggaa atatggacct ggacttcttt acgaccgtcg gaggggataa
    51901 tgaatccttt gccgcttttg cgatcaaagg ttttgacaat tcctgtcatt ttacgggaca
    51961 aacaaattcc ttactgaaaa tactgcgctg cactatacgg ggttaataaa ataaagccag
    52021 cgatatttaa gaccgccgga cggctaaaat aaaatttgct taatctcaat tatcatgcgt
    52081 taatagctgc gtcggtttga aagacagaca gcatacaaag tagtttacta aagcagttct
    52141 cattatcagg cattatcccc ttcttttgag tctctctcct gaacactaag tagtttctgt
    52201 attaaagccc tgtttgccga aaggcccaaa atgaaggaag taaaatatgt ctaataaaat
    52261 gactggttta gtaaaatggt ttaacgcaga taaaggtttt ggctttatca ctcctgatga
    52321 tggcagcaaa gacgttttcg tccatttcac cgccattcag agcaacgaat tccgcacgct
    52381 gaacgaaaat cagaaagttg aattttctat tgagcagggg caacgtggcc ccgcggcagc
    52441 gaacgttgtt acgctctaag gttgccgtta ttactcaaca tctccatttc cgctgtccat
    52501 gttgtcatgg ttcacagtac cgcacatcgg cattcgatgt gacggagcga aaccctttgg
    52561 gcgctaagtg tattttttgt aaatcgacga tgatcacctt tgataacgtt gctctacaaa
    52621 tacgcactga ccatgcactg ctggatttca caaaataata tcaggctccc tcgtggagcc
    52681 ttttttatat ctgtcttatt ttttttcaac gctgtatgta tagtaagcga taacctgttg
    52741 attattgaat ctttcgggga gatggcttat aacatttctt acctgaccag ggtaccggga
    52801 accaacacct tactggcgtg ttgctgtctt ttaagaccag aagaggttaa cagtgaatat
    52861 tgaagagtta aaaaaacaag ccgaaacgga aatcgccgac tttatcgcgc aaaaaatcgc
    52921 cgagctgaac aagaatacag ggaaagaagt ctctgaaatt cgcttcaccg cgcgagaaaa
    52981 aatgaccggg cttgaaagtt atgatgtcaa aatcaaaata atgtgatttt gtgaacatca
    53041 ccccgtgcga ggtgatgttc cgcttgttgc taatttagtg accaatcatt ggcgcttgcg
    53101 gaattaagcg tcggtacaat tcctccggca ccgggctttg ccatactccc gcatacattg
    53161 cgtaaccaat caccgcaaac ataatcccca gaaccagtag cgtcattaac cagccagaca
    53221 acgcaaaggc ttttttattt gccgcaggtt tttgcagtga aaaggtcaat gttgaggcta
    53281 ccggacatga ctctacgcaa gtcatacagc cggtacattc cactgttcgt acctgaatta
    53341 atttatcgac cgggatccgt gatgggcaat tttttgcgca tttgccacag tcgatacaac
    53401 tttcggcatt gcgacgaatc ttaaacggcg ataatagcga aaccatgccc atcagcgcgc
    53461 catatgggca aagataacga caccaggcat ggcgaataaa caggctggca atcagcaaaa
    53521 cggtcacgct gattaatgtc gcggtcccca tatgacgaaa gaaatcgagc attttaacgt
    53581 ccatcaccac gctgtagggc gacaacataa aatagtgaat cgcctgagcg ggcatcaata
    53641 acgcgatata gagaaaaaaa ctcaacagca aatacacttt acaccgcgca gaggaatatc
    53701 cagccagcgg ggaaggacaa attgccgacc aaacagtttg ttaccgagat cgccgattaa
    53761 ttcagaaagc gtaccaaccg ggcataacca tgagcaaaag gcctttttga gtaatagact
    53821 gatgacgata aaagcgacca ataacagcat cgcggcggcg tggacggtaa ctgacctgtt
    53881 gcaaggctat atttcagatt catcagaccg gcaatcggta gccagccttc gatacctccc
    53941 ggtctggcga caaatgtcgt gctacttgcc gtttcgtaat agcgcaccca ataccagaac
    54001 gtgatggcaa tataaatatt cattgccaac agtaataatt gcgtcgcttt acgccaggtc
    54061 gtggcattgc gccagtcatt ccacggtaat ttgccgcccg tcgtgcctgg ccgccgctgc
    54121 cagcgggttc tttttttctc tgccatgatt ttgccagtcc gttaagttgc ataccaaatg
    54181 ccactattct agttgttctt aactggctga tattgattca aatcgcgttc aggtctttct
    54241 tatgcaacca tgcttccaga gcggcaacac tgcgtgtaat ttcttcgtgt ggaagggggg
    54301 cagataatgg ctgctgctcc agttgtgcgc atagctggct ggcactgcac attcccagac
    54361 tcgagcaact gctttttagc tgatgcgcgg cacgctttat tttctcgctg tcctggctgg
    54421 cgcgggcaat gtcgatttca tcgagaagcg gcagggcatg ttgtttaaat aatgccagcc
    54481 attcgtggat cttctccgtc cccattaact gagcgtcttc attgagttgc gagacatcca
    54541 gtggtagatc gttattggct tgcagttgga gatagtgcgc cagtaactga ccgagcactt
    54601 cacgcggcac cggtttaggg ataatcccgc gaaatagtga actggtacgc tggcgcagcg
    54661 tttcgtcaat gacatgggcg ctaaagccaa tcaaaaccag cgacggatat tgctgtgcca
    54721 gttgccgggc aagggtaatg ccgtcgatat ccggcagatc aaaatccacc agtgcggcag
    54781 caaacggttc gctattttgc agtgtctcta aagcctgcgc ggcattgcca atagcaacaa
    54841 cctgcgcacc actggtgttc agcatctcaa cggtaattcg ctgggttagc gggttatctt
    54901 caattaacag caaacgtaaa ccgtcaagac gcaccgcctg attggctgtt tttggcacgg
    54961 gtccagtggc aacacgtaac ggcaagcgta aacaaaaaca gcttccaacc tccggcgtgc
    55021 tggtggcgct aagttcgccg cccatcgcct gggccagacg gctactgata gtcagcccca
    55081 gcccggtgcc gccgcgtttg ccgcttacct gcacaaatgg ctggaagatt tctgccagtt
    55141 tcgcgggatc aataccgcag ccgctgtctt ccacttcgac cagccattgc tcgccatcag
    55201 tgcgactacg caggataatg tgcccttcgt cagtaaaacg cagggcattg ctcaataggt
    55261 tggtaatgac ctgacgaata cgtcgtggat cgcccattaa cgcgctcggt acatcatcgg
    55321 caattgccgt tgccaggcga atcgggtgac ctttcacccg tccgctcatt aattgcaggg
    55381 tactttccag cagcgggcgc ggttcaaagg gctcatcgct gaccgaaaca tttttgccac
    55441 ctgcttcgat agccgaataa tcgagaatat cgttgaggat ggtcagcaac gattcgccag
    55501 agtcggtaat cgcccgcaaa tcatcacgct gggcgttaag tgcggggtta tctgccagca
    55561 gttgagcagt gccgagaata ccgtacagcg gtgtgcggat ctcatggctc atcgccgcca
    55621 gaaacgccga ttttgcctgg ctggcttttt ctgcttccgc ccgtgcctgt cggtgttcta
    55681 tcaccagttc ctgcaattca gctgtacgcg ctttgacctg cgccgccagc tgttcgcggt
    55741 ggcgattcag tgcatgaaca ctgctgcgaa acgcatccat cagccgcccg atggtatcca
    55801 gctcccgtac gccagcggtt tccgggaaag gggagtcaat atcaccgtcc agcagccgtt
    55861 gcagcgcctg cgtttgttcg gcaagtggac gcgtgactga gcgataaacc acgcgccaga
    55921 ggatcagaat cagtgcgcaa agtgaaacca tccccagcaa taacaggctg tattgcccgc
    55981 gtgcactggc tttttccaga tgtgccagtc catgctgatt gcgcagctca atggtgtcga
    56041 ccagctgact gacttcgcta ctaaactgcg cgaactgggc gatattattt tgggcgagag
    56101 tttgcaggtg attgctgatt tcactgtcct gctggaacag cgccaacaga tcgctatatt
    56161 ggctaacggt agttaacgtt gttgcgacct gcgcacgaac tcccggatct tcaatgcgta
    56221 tttgccgacg ttgcagaatt ttcaccgcat tattgagctg cttttccagc gttggtgcat
    56281 ttttctggat ctgctccagc cccagattca tcaccatttg ctgcacccgc agagcgctaa
    56341 ggcgcagttc attcatctgg ttaacatact caagatcgat atcaatcagc cgatcgagtg
    56401 cactttcagc agcctgacgc tgatcttgtt cgatcaaatc gtaaatcccg gcctgggtcg
    56461 ctccagcgga agttgtcgca ttattcgcct gaccttgcgc caggcgtgcg atctcatcgg
    56521 cggcagcgac tatctgctga ctgagttgcc gttgttgctg gcgtagttgc agacgccgcc
    56581 ccaccatttc cccttgctga cgtaatgaac gggagatctc ctgctcctgt tgttcaatag
    56641 cggtggtatc aaaaccttgt tcccgtaacg cttgcagcaa cgcattaatc ttcaggcttt
    56701 gtgctgtgag cattcgcccc tgcgcctgcc acatcttttc gttatcggca ctggtcaggt
    56761 tctgcgcggc gaaaagttcc caggcgctgg cttcgctcaa ctggcgcgcc atattcatgg
    56821 taggaatcaa tgcctgagta ttgtcttttt ccacctggct gataaagcgc aggttgtacc
    56881 atcccaccag ggtactggtc agggttaaca gcgccatcag ggcaaagccc atccagagtc
    56941 ttcgggtcag ggttaaattc acggtcggtg cactttaggt gaaaaatgtt gagtcgcaaa
    57001 gcgga
//
LOCUS       DAJVTL010000008        55040 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.008, whole genome shotgun sequence.
ACCESSION   DAJVTL010000008 DAJVTL010000000
VERSION     DAJVTL010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 55040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 55040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..55040
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.008"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            68..763
                     /locus_tag="OQQ26_000466"
     CDS             68..763
                     /locus_tag="OQQ26_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001498578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856055.1"
                     /translation="MDDAETGYITQLLTDEDGFLVEETIDVLKRIGFPTPLSFPEGLN
                     IDDDNADEEEAFWEILESNAHCSVINDIYHALNDVYGFYIAYVDELIQDDDLDVYSSE
                     AINIQSSLISLATCKIEIDTPVASNFKEFRYRVKKDYENWLNQLKMMAFRAGIPLKAE
                     LLEMVYNTADQLSVAAEAERFDFNKSRIHPDIYMNEILTGMRIIHQVLPVIMQKLEIT
                     DFKLDETDLCLGK"
     gene            complement(838..924)
                     /locus_tag="OQQ26_000467"
     tRNA            complement(838..924)
                     /locus_tag="OQQ26_000467"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(888..890),aa:Leu,seq:gag)
     gene            complement(939..1271)
                     /gene="secG"
                     /locus_tag="OQQ26_000468"
     CDS             complement(939..1271)
                     /gene="secG"
                     /locus_tag="OQQ26_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HCS1856056.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA
                     KPTSDIPN"
     gene            complement(1499..2836)
                     /gene="glmM"
                     /locus_tag="OQQ26_000469"
     CDS             complement(1499..2836)
                     /gene="glmM"
                     /locus_tag="OQQ26_000469"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HCS1856057.1"
                     /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
                     IIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
                     HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
                     FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
                     ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL
                     RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
                     KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
                     AVTAEVEAALGSRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV"
     gene            complement(2829..3677)
                     /gene="folP"
                     /locus_tag="OQQ26_000470"
     CDS             complement(2829..3677)
                     /gene="folP"
                     /locus_tag="OQQ26_000470"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCS1856058.1"
                     /translation="MKLFAQGTSLDLSHLHVMGILNVTPDSFSDGGTHNSLIDAVKHA
                     NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEV
                     IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE
                     VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM
                     SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK
                     ENKRYE"
     gene            complement(3767..5701)
                     /gene="ftsH"
                     /locus_tag="OQQ26_000471"
     CDS             complement(3767..5701)
                     /gene="ftsH"
                     /locus_tag="OQQ26_000471"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HCS1856059.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
                     QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPDASNNSGDNGSPKAPRP
                     VDEPRTPNPGNTMSEQVGDK"
     gene            complement(5801..6430)
                     /gene="rlmE"
                     /locus_tag="OQQ26_000472"
     CDS             complement(5801..6430)
                     /gene="rlmE"
                     /locus_tag="OQQ26_000472"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HCS1856060.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
     gene            6556..6849
                     /gene="yhbY"
                     /locus_tag="OQQ26_000473"
     CDS             6556..6849
                     /gene="yhbY"
                     /locus_tag="OQQ26_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HCS1856061.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
                     ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(7005..7481)
                     /gene="greA"
                     /locus_tag="OQQ26_000474"
     CDS             complement(7005..7481)
                     /gene="greA"
                     /locus_tag="OQQ26_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HCS1856062.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
     gene            7729..9162
                     /gene="dacB"
                     /locus_tag="OQQ26_000475"
     CDS             7729..9162
                     /gene="dacB"
                     /locus_tag="OQQ26_000475"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HCS1856063.1"
                     /translation="MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVKKVG
                     ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
                     ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
                     SAPPTAAIVDRNCFSVSLYSAQKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
                     LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
                     QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
                     AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     EPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(9348..10520)
                     /gene="cgtA"
                     /locus_tag="OQQ26_000476"
     CDS             complement(9348..10520)
                     /gene="cgtA"
                     /locus_tag="OQQ26_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HCS1856064.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
                     PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFILE
                     NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
     gene            complement(10536..11501)
                     /locus_tag="OQQ26_000477"
     CDS             complement(10536..11501)
                     /locus_tag="OQQ26_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1856065.1"
                     /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
                     MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG
                     VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE"
     gene            complement(11628..11885)
                     /gene="rpmA"
                     /locus_tag="OQQ26_000478"
     CDS             complement(11628..11885)
                     /gene="rpmA"
                     /locus_tag="OQQ26_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HCS1856066.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
     gene            complement(11906..12217)
                     /gene="rplU"
                     /locus_tag="OQQ26_000479"
     CDS             complement(11906..12217)
                     /gene="rplU"
                     /locus_tag="OQQ26_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HCS1856067.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            12476..13447
                     /gene="ispB"
                     /locus_tag="OQQ26_000480"
     CDS             12476..13447
                     /gene="ispB"
                     /locus_tag="OQQ26_000480"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HCS1856068.1"
                     /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
                     KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
                     DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
                     ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR"
     gene            13675..13953
                     /gene="sfsB"
                     /locus_tag="OQQ26_000481"
     CDS             13675..13953
                     /gene="sfsB"
                     /locus_tag="OQQ26_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HCS1856069.1"
                     /translation="MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
                     PWPKGEMIIAKALGTDPWVIWPSHYHDPQTHEFIDRTQLMRSYTKPKK"
     gene            complement(14001..15260)
                     /gene="murA"
                     /locus_tag="OQQ26_000482"
     CDS             complement(14001..15260)
                     /gene="murA"
                     /locus_tag="OQQ26_000482"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HCS1856070.1"
                     /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
                     YHIDRGYERIEDKLRALGANIERVKGE"
     gene            complement(15315..15569)
                     /gene="ibaG"
                     /locus_tag="OQQ26_000483"
     CDS             complement(15315..15569)
                     /gene="ibaG"
                     /locus_tag="OQQ26_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417657.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HCS1856071.1"
                     /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(15729..16022)
                     /gene="mlaB"
                     /locus_tag="OQQ26_000484"
     CDS             complement(15729..16022)
                     /gene="mlaB"
                     /locus_tag="OQQ26_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HCS1856072.1"
                     /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGVTCIDL
                     SRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLSKLYNLPADVLPR"
     gene            complement(16022..16657)
                     /gene="mlaC"
                     /locus_tag="OQQ26_000485"
     CDS             complement(16022..16657)
                     /gene="mlaC"
                     /locus_tag="OQQ26_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HCS1856073.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
                     EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
                     WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
     gene            complement(16676..17227)
                     /gene="mlaD"
                     /locus_tag="OQQ26_000486"
     CDS             complement(16676..17227)
                     /gene="mlaD"
                     /locus_tag="OQQ26_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HCS1856074.1"
                     /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA
                     TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
                     NSGDAPATAPGNNETTEPVGTTK"
     gene            complement(17232..18014)
                     /gene="mlaE"
                     /locus_tag="OQQ26_000487"
     CDS             complement(17232..18014)
                     /gene="mlaE"
                     /locus_tag="OQQ26_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HCS1856075.1"
                     /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
                     VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
                     IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
                     FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
     gene            complement(18022..18831)
                     /gene="mlaF"
                     /locus_tag="OQQ26_000488"
     CDS             complement(18022..18831)
                     /gene="mlaF"
                     /locus_tag="OQQ26_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HCS1856076.1"
                     /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
                     LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
                     ADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
     gene            19041..20018
                     /locus_tag="OQQ26_000489"
     CDS             19041..20018
                     /locus_tag="OQQ26_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HCS1856077.1"
                     /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEIIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
                     RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR
                     EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI
                     GTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY
                     SVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE"
     gene            20032..21018
                     /gene="kdsD"
                     /locus_tag="OQQ26_000490"
     CDS             20032..21018
                     /gene="kdsD"
                     /locus_tag="OQQ26_000490"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HCS1856078.1"
                     /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
                     MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
                     VKKTASLRDALLEVTRKNLGMTVICDDNMMIKGIFTDGDLRRVFDMGVDVRQLSIADV
                     MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
     gene            21039..21605
                     /gene="kdsC"
                     /locus_tag="OQQ26_000491"
     CDS             21039..21605
                     /gene="kdsC"
                     /locus_tag="OQQ26_000491"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HCS1856079.1"
                     /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
                     LIAFSNLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
                     GGRGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            21602..22177
                     /gene="lptC"
                     /locus_tag="OQQ26_000492"
     CDS             21602..22177
                     /gene="lptC"
                     /locus_tag="OQQ26_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HCS1856080.1"
                     /translation="MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
                     EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
                     LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
                     LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            22146..22703
                     /gene="lptA"
                     /locus_tag="OQQ26_000493"
     CDS             22146..22703
                     /gene="lptA"
                     /locus_tag="OQQ26_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HCS1856081.1"
                     /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
                     LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
                     KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
                     TTVLVPSQLQDKNNKGQTPAQKKGN"
     gene            22710..23435
                     /gene="lptB"
                     /locus_tag="OQQ26_000494"
     CDS             22710..23435
                     /gene="lptB"
                     /locus_tag="OQQ26_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HCS1856082.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
                     LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            23483..24916
                     /gene="rpoN"
                     /locus_tag="OQQ26_000495"
     CDS             23483..24916
                     /gene="rpoN"
                     /locus_tag="OQQ26_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HCS1856083.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
                     PLLEQIDTHEEIDTRETQDSETLDTADALEQKEMPEDLPLDASWDTIYTAGTPSGTSG
                     DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLED
                     ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
                     IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            24939..25226
                     /gene="hpf"
                     /locus_tag="OQQ26_000496"
     CDS             24939..25226
                     /gene="hpf"
                     /locus_tag="OQQ26_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HCS1856084.1"
                     /translation="MQLNITGNNVEITEALREFVTAKFAKLEQYFDQINQVYVVLKVE
                     KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
     gene            25344..25835
                     /gene="ptsN"
                     /locus_tag="OQQ26_000497"
     CDS             25344..25835
                     /gene="ptsN"
                     /locus_tag="OQQ26_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HCS1856085.1"
                     /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
                     DEA"
     gene            25881..26735
                     /gene="rapZ"
                     /locus_tag="OQQ26_000498"
     CDS             25881..26735
                     /gene="rapZ"
                     /locus_tag="OQQ26_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HCS1856086.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
                     ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKP"
     gene            26732..27004
                     /gene="npr"
                     /locus_tag="OQQ26_000499"
     CDS             26732..27004
                     /gene="npr"
                     /locus_tag="OQQ26_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HCS1856087.1"
                     /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
     gene            27218..27850
                     /gene="yrbL"
                     /locus_tag="OQQ26_000500"
     CDS             27218..27850
                     /gene="yrbL"
                     /locus_tag="OQQ26_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HCS1856088.1"
                     /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR
                     RELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR
                     YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLI
                     PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
     gene            complement(27847..28575)
                     /gene="mtgA"
                     /locus_tag="OQQ26_000501"
     CDS             complement(27847..28575)
                     /gene="mtgA"
                     /locus_tag="OQQ26_000501"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HCS1856089.1"
                     /translation="MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAV
                     MVERQVSAWLHGNFRYVAYSDWVSMDQISPWMGLAVIAAEDQKFPEHWGFDVASIEKA
                     LAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
                     YLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSAPSGYVHS
                     RQAWILRQMYQLGGEQFMQQHQLD"
     gene            complement(28572..29226)
                     /gene="elbB"
                     /locus_tag="OQQ26_000502"
                     /pseudo
     CDS             complement(28572..29226)
                     /gene="elbB"
                     /locus_tag="OQQ26_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709007.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
     gene            complement(29456..31792)
                     /gene="arcB"
                     /locus_tag="OQQ26_000503"
     CDS             complement(29456..31792)
                     /gene="arcB"
                     /locus_tag="OQQ26_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HCS1856090.1"
                     /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
                     AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
                     PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
                     VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
                     TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PELPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
     gene            complement(31888..32817)
                     /locus_tag="OQQ26_000504"
     CDS             complement(31888..32817)
                     /locus_tag="OQQ26_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312117.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HCS1856091.1"
                     /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
                     HNFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI
                     VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWAGMVELDRYLNEHGVQGSALGRPWLPPTE"
     gene            33491..37951
                     /gene="gltB"
                     /locus_tag="OQQ26_000505"
     CDS             33491..37951
                     /gene="gltB"
                     /locus_tag="OQQ26_000505"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HCS1856092.1"
                     /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELTAAARRIV
                     EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPLWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET
                     GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD
                     DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP
                     VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLVDTHAIAKDYRTVMLNYRNGINKSLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE
                     TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHAGKALYCTEN
                     NPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH
                     EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL
                     GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDDLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            37964..39382
                     /gene="gltD"
                     /locus_tag="OQQ26_000506"
     CDS             37964..39382
                     /gene="gltD"
                     /locus_tag="OQQ26_000506"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit GltD"
                     /protein_id="HCS1856093.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGE
                     TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA
                     DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNWLEV"
     gene            39566..40693
                     /locus_tag="OQQ26_000507"
     CDS             39566..40693
                     /locus_tag="OQQ26_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HCS1856094.1"
                     /translation="MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWE
                     IGRRIVEFEQGGEARAAYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEI
                     RQTVSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPQPWSTYVRLLSVKNADARSFYE
                     KETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPTETHILPQQAIRDPFVLE
                     FLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRR
                     LRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYA
                     LAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGFRRR"
     gene            complement(40753..41217)
                     /locus_tag="OQQ26_000508"
     CDS             complement(40753..41217)
                     /locus_tag="OQQ26_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HCS1856095.1"
                     /translation="MMMGEVRSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
                     LCSTIENEQAIILKPGMFAVFMPGEPHKPGCVVGELGEIKKVVVKVKADLMA"
     gene            complement(41214..42089)
                     /gene="nanK"
                     /locus_tag="OQQ26_000509"
     CDS             complement(41214..42089)
                     /gene="nanK"
                     /locus_tag="OQQ26_000509"
                     /EC_number="2.7.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HCS1856096.1"
                     /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDA
                     LSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIA
                     INDAQAAAWAEYQALEGDITDMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLAD
                     PHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADARTIFTRAGQGDEQAQQLIHRSA
                     RTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVEMYLAQEPAAFHVDLLAAHYRHD
                     AGLLGAALLAQGEKL"
     gene            complement(42086..42775)
                     /locus_tag="OQQ26_000510"
     CDS             complement(42086..42775)
                     /locus_tag="OQQ26_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HCS1856097.1"
                     /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
                     AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
                     AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
                     ETPEEPDLALVKTLSDAGCRVIAEGRYNSPAQAADAMRHGAWAVTVGSAITRLEHICQ
                     WYNTAMKKAVL"
     gene            complement(42823..44313)
                     /gene="nanT"
                     /locus_tag="OQQ26_000511"
     CDS             complement(42823..44313)
                     /gene="nanT"
                     /locus_tag="OQQ26_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312124.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HCS1856098.1"
                     /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC
                     GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWQKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCATIFISFMVQSTGKRWPT
                     GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFL
                     GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGRAKNDLVKTKS"
     gene            complement(44422..45315)
                     /gene="nanA"
                     /locus_tag="OQQ26_000512"
     CDS             complement(44422..45315)
                     /gene="nanA"
                     /locus_tag="OQQ26_000512"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HCS1856099.1"
                     /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
                     GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
                     VDEKYLPELKALAQQLMQERG"
     gene            complement(45437..46228)
                     /gene="nanR"
                     /locus_tag="OQQ26_000513"
     CDS             complement(45437..46228)
                     /gene="nanR"
                     /locus_tag="OQQ26_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417693.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HCS1856100.1"
                     /translation="MGLMNAFDSQTEDSSLAIGRNLRSRPLARKKLSEMVEEELEQMI
                     RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ
                     SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS
                     YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
     gene            46608..47975
                     /gene="dcuC"
                     /locus_tag="OQQ26_000514"
     CDS             46608..47975
                     /gene="dcuC"
                     /locus_tag="OQQ26_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HCS1856101.1"
                     /translation="MFSIIISVIVLITMGYLILKNYKPQVVLAAAGVFLMMCGVWLGF
                     GGVLDPAKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSL
                     LSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAV
                     AVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRA
                     FDKKDKNINHEQAEQKTLDNVPPLYYAILPVMPLILMLGSLFLAHVGLMKSELHLVVV
                     MLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQCANVVTLVVAGEIFAKGLTTIG
                     TVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVP
                     AVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIAT
                     ITLFY"
     gene            complement(48018..48515)
                     /gene="sspB"
                     /locus_tag="OQQ26_000515"
     CDS             complement(48018..48515)
                     /gene="sspB"
                     /locus_tag="OQQ26_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HCS1856102.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME
                     YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA
                     LRVVK"
     gene            complement(48521..49159)
                     /gene="sspA"
                     /locus_tag="OQQ26_000516"
     CDS             complement(48521..49159)
                     /gene="sspA"
                     /locus_tag="OQQ26_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HCS1856103.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGPGTKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
     gene            complement(49554..49946)
                     /gene="rpsI"
                     /locus_tag="OQQ26_000517"
     CDS             complement(49554..49946)
                     /gene="rpsI"
                     /locus_tag="OQQ26_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HCS1856104.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            complement(49962..50390)
                     /gene="rplM"
                     /locus_tag="OQQ26_000518"
     CDS             complement(49962..50390)
                     /gene="rplM"
                     /locus_tag="OQQ26_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HCS1856105.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            complement(50609..51736)
                     /gene="zapE"
                     /locus_tag="OQQ26_000519"
     CDS             complement(50609..51736)
                     /gene="zapE"
                     /locus_tag="OQQ26_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HCS1856106.1"
                     /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTP
                     PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
                     LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
                     KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
                     TQAHLWLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFT
                     TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
                     AEVPLYEIYQGERLKFEFQRCLSRLQEMQSEEYLKREHLAG"
     gene            51930..52328
                     /locus_tag="OQQ26_000520"
     CDS             51930..52328
                     /locus_tag="OQQ26_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HCS1856107.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRTGAKRD"
     gene            52482..53849
                     /gene="degQ"
                     /locus_tag="OQQ26_000521"
     CDS             52482..53849
                     /gene="degQ"
                     /locus_tag="OQQ26_000521"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HCS1856108.1"
                     /translation="MKKQTQLLSALALSVGLTLSASFQAAASIPGQVADQAPLPSLAP
                     MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM
                     SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRITI
                     TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGI
                     KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVSSIAEMRKVLAAKPAIIALQIVRGNESI
                     YLLMR"
     gene            53939..55006
                     /gene="degS"
                     /locus_tag="OQQ26_000522"
     CDS             53939..55006
                     /gene="degS"
                     /locus_tag="OQQ26_000522"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HCS1856109.1"
                     /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
                     ASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGI
                     DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
                     VMRDDKQLTLQVTIQEYPATN"
BASE COUNT        13554 a        14722 c        13720 g        13044 t
ORIGIN      
        1 atggacgggc tcagtcgcga atgctgagaa atgggatcga cttatccatt ttcttgctcg
       61 acgagctatg gacgatgctg aaacgggtta tataacacaa cttcttactg acgaagatgg
      121 ttttttggtt gaagaaacaa ttgatgtatt aaagcgaata ggttttccta cacctctttc
      181 ctttcctgaa ggacttaata ttgacgacga taatgctgat gaagaagagg ctttttggga
      241 gatattagag agcaatgctc attgttctgt aattaatgat atttatcatg ctctgaatga
      301 tgtttatggt ttctacatag catatgttga tgagttgatt caggacgacg atttagatgt
      361 ctattcaagc gaagccatca atattcagag ttcattgata tcacttgcta catgcaaaat
      421 tgaaattgat actcctgttg cgtcaaactt taaagaattt cgttatagag ttaaaaaaga
      481 ctacgaaaat tggttgaatc aactcaagat gatggcattc agggcgggaa ttccgttaaa
      541 agccgaactt ctggaaatgg tttataacac cgctgaccaa cttagcgttg cagcagaagc
      601 cgaacgtttc gatttcaata aatctcgcat tcatccagat atatacatga acgagatcct
      661 tactggcatg agaataattc accaagtgct tccggtaata atgcaaaagt tagaaattac
      721 agatttcaaa ctagatgaaa cagatttatg cctgggtaaa tagttatcaa attaagaata
      781 cttagcctgg cttataaaac gaaaaaagac gcttttcagc gtctcttttc tggaatttgg
      841 taccgaggac gggacttgaa cccgtaagcc ctattgggca ctaccacctc aaggtagcgt
      901 gtctaccaat tccaccacct cggcacggat actacttttt agttcgggat atcgctggtc
      961 ggcttagccg gagcagctgg ctgagtttgt tcggttttcg ccggtgcact cagattttcc
     1021 cattcgctac ctttattggt tttgttgcta ttgatgttac ccagcaccag actgatgatg
     1081 aagaataacg ttgccagcag cgccgtcatg cgggtcatga agttaccaga accacttgaa
     1141 ccaaacagcg tagcggaagc gcctgctccg aaggaggctc ccatatcagc gcctttacct
     1201 tgctgcagca tgatcagacc aacaaggcca attgccacaa taaggaaaac tactaaaaga
     1261 gcttcgtaca taatcaacct gttccttgcg gagttgccgc gtaccaatgc ttcaaccaat
     1321 aaagcgggag tttttaatct ttcccactga agcgggtgtg aatactaacc aaagcgaatg
     1381 accttcgcaa gggcaatttt atcgcattgt atcaactgcg gaaaaaaaca gcaaaaccga
     1441 tgtgttcgct gaaaaaaaag gtgacaatcg ccgccttttt agccagttat ttaccgtttt
     1501 aaacggcttt tactgcatcg gcgatacggt gtgcaaattc agttacctgc gcttcgtctt
     1561 caccttctac catcacgcga attaacggtt cggtgccgga tttacgcaac agcacacgtc
     1621 cacggctacc cagcgccgct tcaacttcgg cggtcacagc tttgactgac tcatgctcaa
     1681 gcggatcgcc gctacctgcg gtgtaacgca cgttaaccag aatctgcggg aacattttca
     1741 tgccgctgca aaggtcgtgc aggctcatat ggttacgtgc catcgccgcc agcacctgca
     1801 agccagcaac gatgccgtca ccggtagtgg ttttatccag caggatcaca tgaccggaat
     1861 tctctgcacc gatacgccag cctttctcct gcattttttc cagtacgtag cggtcaccca
     1921 ctttcgcgcg cgcaaatgga attcctaact gtttcagcgc cagttcaagc cccatgttgc
     1981 tcatcaatgt acccacagcg ccaccacgca gctggccctg acgaagacct tcacgcgcga
     2041 tgatatacat gatctgatcg ccatcgactt tattgccttc atggtcaacc ataatcacgc
     2101 gatcgccgtc gccgtcgaag gcaataccga gatccgcttt ttcagccagc acacgagcct
     2161 ggagcgcgcg aacgtcggta gcccccactt cggcattgat gtttacaccg tttggctcac
     2221 aaccgatagc gataacgttc gcccccagtt cgcgcagcac gttcggcgcg atgtgataag
     2281 tcgcaccgtt tgcacaatcc accacaatct tcagttcact gaggctaagt tcgttcggga
     2341 acgtggcttt gcaaaactcg atatagcgac ccgcggcatc aacgatacgg ctggctttac
     2401 ccagttctgc cgaatcaacg cagctgatct ccttttccat ttccgcttcg atggcctctt
     2461 ctaccgcatc cggcagtttg gtgccgtcga tagagaagaa tttaatgcca ttatcgtaga
     2521 acgggttatg cgatgcagat atcacaattc cggcctctgc gcggaaggta cgcgtcagat
     2581 aagccacggc cggtgttggc atcgggccag tgaagagtgc ggaaaggccc gctgccgcca
     2641 gacccgcttc cagtgctgac tccagcatat agccagaaat acgcgtgtct ttaccaataa
     2701 taatcttacg ggagccgtgg cgcgccagca ctttacccgc ggcccaaccc agcttaagca
     2761 caaaatcagg tgtgatcggc gcatccccta cacgaccacg aatcccatcg gtaccgaaat
     2821 atttacgatt actcatagcg tttgttttcc tttgcagaca gagtggcttc caccacccgc
     2881 atcgcttcta cggtttcttt gacgtcatga acacgaatga tgtgcgcgcc ttgcattgcg
     2941 gcaatgaccg cacaggccag actaccgctc aggcgctcgg acggccccac gttcagcagc
     3001 tgcccaatca tcgattttcg tgacataccc accaacagcg gcaggttgaa atggtgaaat
     3061 tcagccaggc gcgccagtaa tgaatagtta tgggagagat ttttaccgaa accgaatccg
     3121 gggtcgagca acaatttctc ttttgcgata cccgcctgct cgcaacgtgc tatttgctca
     3181 ataaagtagc gattcacttc tgcaaagaca tcgtcatact tcggagcttc ctgcatggtt
     3241 tttggatttc cctgcatatg catcagacaa accggtaaac cggtttctgc agccgcctcc
     3301 agagcgccag gttcagaaag ggagcggata tcattaataa tgtgagcgcc aactttcgct
     3361 gactcacgga tgacttctgg tttggatgta tcgaccgaga tccagacttc gaagcgttga
     3421 gcaattgcct caaccacagg aataacacgt tgcaactctt cttcaacgct aacttccgcc
     3481 gcccctgggc gcgtggactc gccaccaacg tcaatgatcg tcgcgccagc attgatcatc
     3541 agattcgcat gtttcaccgc atctatcagc gagttatgcg tgccaccatc cgaaaaggaa
     3601 tcaggcgtga cgttgaggat ccccattacg tgaagatggc taaggtccag tgaagtaccc
     3661 tgggcaaaga gtttcatgat gttatccctg gtatgaattg ataagaaaaa accccggagc
     3721 acgccccggg gttttcggta caaatacagt catctgatgc gggaacttac ttgtcgccta
     3781 cctgctctga catggtgtta cccgggttcg gcgtacgcgg ttcatcaacc ggacgaggag
     3841 cctttggact accattgtcg ccagaattgt tagaagcgtc tggttcttcc cagcccgctg
     3901 gcggacgtac atcgcgacgt gccatcaggt catcaatctg cggtgcgtcg atagtctcat
     3961 atttcatgag agcatctttc atcgcatgca gaatatccat attgtcggtc agaagctgac
     4021 gcgcacgatt atagttacgc tcaatcagtg ctttcacttc ctggtcgatg atacgtgcag
     4081 tttcatcgga catatgtttc gctttcgcta cgctacggcc gaggaacact tcaccttctt
     4141 cttccgcgta cagcagtgga cccaatttct cagagaagcc ccactgagtc accatgttac
     4201 gcgccaggtt ggtcgcaact ttaatatcgt tggacgcacc ggtagaaaca tgttccggcc
     4261 cgtagatgat ctcttctgcc agacgaccac cgtacagcgt agaaatctgg ctttccagtt
     4321 tctgacggct ggcgctgatt gcgtcgccct caggcaagaa gaaagtcaca cccagcgcac
     4381 gaccgcgtgg gataatcgtc actttgtgca ccggatcgtg ttccggcacc aggcgaccga
     4441 taatcgcatg acccgcttcg tggtaagccg tcgattcttt ctgcgcttcc gtcatcacca
     4501 tggagcgacg ttccgcaccc atcatgattt tgtctttcgc tttctcaaac tcaaccatcg
     4561 acacaacgcg tttgttgcca cgagcagcga acagtgccgc ttcgtttacc aggttcgcca
     4621 ggtcagcacc ggagaaacca ggagtaccac gggcaatgat tgccgcgtca atatcgggtg
     4681 ccaatggtac gcgacgcatg tgaactttca ggatctgctc acgaccgcga acatctggca
     4741 agccaaccac aacctgacgg tcgaaacggc caggacgcag cagggccggg tcaagaacgt
     4801 ccggacggtt agtcgcggcg ataacgatga taccttcgtt accttcgaag ccatccatct
     4861 caaccagcat ctggttcaga gtctgttcac gttcatcgtg accaccgccc agaccagcgc
     4921 cacgctggcg gcctacggcg tcgatttcat cgataaagat gatgcacggt gccgctttct
     4981 tcgcctgttc gaacatgtca cgaacacggg atgcacccac accgacgaac atttctacga
     5041 agtcagaacc ggagatagta aagaacggaa ctttcgcttc gcctgcaatc gctttcgcca
     5101 gcaacgtttt accggtaccc ggaggaccga ccatcaggac gcctttcggg atcttaccgc
     5161 cgagtttctg gaagcggctc ggctcgcgca gatactctac cagttcagca acttcttctt
     5221 ttgcttcgtc gcagcccgca acgtcagcaa aggtcgtttt gatctgatct tccgtcagca
     5281 tgcgcgcttt gctcttacca aacgacatgg cacctttgcc accgccgccc tgcatttgac
     5341 gcatgaagaa gatccagaca ccaatcagca acagcatcgg gaaccaggag atgaagatag
     5401 aagccagcag gcttggttct tcaggcggtt caccgacaac cttgacgttc ttggtcaaca
     5461 ggttatccag taatttcgga tcctgaaccg gaatgtaagt ggtataacgg ttactatctt
     5521 tcttggtaac gttgatttca cgtccgttga tacgcgcttc acgaacctgg tcgttattga
     5581 cctcttgtag gaaggtagag taatccacct tacggccatt agactcgctg ggcccaaagc
     5641 tctggaatac tgacatcagc acaacggcaa tgaccagcca gagtattagg tttttcgcca
     5701 tgtcactcaa gggattaacc tcttattaca actgtgttaa aaacagcgtc aggatactct
     5761 atatccagca tctttcaaac tttcgtctga aatctcccgg ttagggttta cgcccggtcg
     5821 ctacaatata cacttcccgc gaacgtgcac gagaagagtc cggcttacga actttgacct
     5881 tcgtaaacag ggagcgaatt tcccttagat actcatcgaa accttcgccc tggaacacct
     5941 tcactacaaa actgccacct ggcgctaata catcacgaca catttctagc gccagttcca
     6001 ccagatacat ggcacggggg atatccaccg ccggtgttcc gctcatgttt ggtgccatat
     6061 cggacatgac aacctggact ttgctgtcgc caacgcgctc cagcagtgct ttcatcacca
     6121 gttcatcacg aaaatcgccc tgaagaaagt ccacaccaac gataggatcc ataggtaaaa
     6181 gatcgcaagc gatgatgcgg cctttgccgc caatttgggt gaccacatat tgtgaccaac
     6241 cacccggagc agcaccaagg tcgacaaccg tcattcccgg tttaaagagt ttgtcacttt
     6301 gctgtatttc atcaagttta aaccaggcac gggaacgtaa cccctttttc tgtgcctgtt
     6361 gaacatattt atcgctaaag tgttcctgaa gccagcggct ggagctggca gaacgcttct
     6421 tacctgtcat ttaactttcc catggggata actcatcgta accaattgcg taaattttta
     6481 cgcgcctatt tggtgatata tgggagatgg cggtagaatg acccgttttc aatcccaacg
     6541 taagcaaaaa atacgatgaa tctgagtact aaacaaaaac agcacctgaa aggtctggca
     6601 catccgctca agccagttgt tctgcttggc agtaatggtt tgaccgaagg ggtgctggcc
     6661 gagattgaac aagcgttaga gcaccatgaa ctcatcaagg tgaaaatcgc caccgaagat
     6721 cgcgaaacaa aaaccttgat cgtggaagct atcgtgcgcg aaaccggcgc ctgtaatgta
     6781 caggtcatcg gtaaaacgct ggtgctttat cgcccaacta aagaacgtaa aatctcgctg
     6841 ccacgctaag attatcctaa agttacacac atttgctgtg taaaacgagg ggttttccgc
     6901 aggcaggaga gcaaaatgcc acgctctgtt cgttgataaa aggccgcata gcggcctttt
     6961 tcctttcttt acaatacatc aacatcttga gtattgggta attcttacag gtattccacc
     7021 ttaattactt caaattctac ttcgccgccc ggcgttttga tgaccacaac atcatcttct
     7081 tctttgccga tcaggccacg agcaataggc gagtttacag aaatcaggtt ttgtttaaag
     7141 tcagcttcgt catcgccaac gatgcgataa gtctgttctt cgtcagaatc cagattcagc
     7201 accgttacgg tagcaccaaa aataacgcgc ccattgttag gcattttggt gacatcaatc
     7261 acctgcgcgt ttgacagctt ggcttcgatg tctttgatac ggccttcgca gaagccctgc
     7321 tgttcacgag ctgcgtggta ttcggcgttt tctttcaggt cgccatgctc acgcgcttcc
     7381 gcgatagcag caatgatttc aggacggcgc acagatttca gaaaatccag ctcttcgcgt
     7441 aatttttcag cgccgcgtaa ggtcatcgga atagcttgca tttgttatac ctcttgaata
     7501 ttcctgatgg ggcaagtctt cacccacccc ggctgttcgg cctgcccggc ataactcctc
     7561 accgggacca gaagcaaaaa aataccgacc cgggtacaag tcccaagtca gctacaattc
     7621 acattttgat agtcatttta ccctgaagtt cccgaagggt catcgtttac tttatagggc
     7681 gttgcgccgt agtatgacgg ctcgattcca ggttgttagc gcgagattat gcgattttcc
     7741 agatttatca tcggattgac cagctgtata gcgttcagtg ttcaggccgc aaatgttgat
     7801 gagtacatta ctcaactccc cgctggtgcc aaccttgccc tgatggtgaa aaaagtcggc
     7861 gcgtcggccc ccgctattga ttaccacagt cagcagatgg cgctgcctgc cagtacccag
     7921 aaagtgatta ctgcgctggc ggcgttgatt caactcggcc ccgattttcg ttttaccacg
     7981 acgcttgaaa ccaaaggcaa tgtggaaaac ggcgtactta agggtgactt agtggcgcga
     8041 tttggtgccg atccgacgtt aaaacgtcag gatattcgca atatggtcgc gactttgaaa
     8101 aaatctggcg tcaaccaaat cgatggcaat gtgttgatag atacctccat tttcgccagc
     8161 cacgataaag cccccggctg gccatggaat gacatgacac aatgctttag cgctccgcct
     8221 accgccgcca tagttgaccg caactgtttc tccgtctcgc tctacagtgc ccaaaaaccc
     8281 ggtgatatgg cctttatacg cgtggcatct tattaccccg ttacgatgtt cagccaggta
     8341 cgcaccctcc cccgtggttc tgccgaagcg caatactgcg aactggatgt cgtaccaggc
     8401 gacctgaacc gctttacgct gacgggatgc ctgccacaac gttctgagcc gctcccgttg
     8461 gcttttgccg tgcaggatgg agccagttat gccggtgcaa ttctgaaaga tgagttaaaa
     8521 caggcgggta tcacctggag cggaacactg ctgcgccaga ctcaggttaa cgaacctgga
     8581 acggtagttg ccagtaaaca gtcggccccg ctgcacgatc tgcttaagat tatgctgaaa
     8641 aagtcggata acatgatcgc cgatacggtt ttccgcatga taggccatgc gcgcttcaat
     8701 gtacctggta catggcgggc cgggtcggac gctgtgcgtc agatcctgcg ccagcaagcc
     8761 ggtgtcgata ttggaaacac cattattgcc gatggttcag ggctttcgcg gcataacctg
     8821 attgcccccg ccaccatgat gcaggtgctg caatacattg cccaacacga caatgaactt
     8881 aactttatct ccatgctgcc gctggcgggc tatgacggct ctttgcagta ccgtgcaggt
     8941 ctgcatcagg cgggcgtgga tggaaaagtc tcagcgaaaa ccggttcgtt gcagggggta
     9001 tataacctgg cgggattcat taccacagcg agcgggcaac gaatggcgtt tgtgcaatat
     9061 ctttctggct atgcagtaga acctgcggat cagcgtaatc gccgtattcc gttagtgcgt
     9121 tttgaaagcc gtttgtataa agatatttat cagaacaatt agtcaaaaag aaaccccggc
     9181 acatggccgg ggcttcagat tattgacaaa gtgcgctttg tttatgccgg atgcggcgta
     9241 aacgccttat ccggcctaca aaatcgtgca aattcaacat attgcaattc tcttgtaggc
     9301 ctgataagcg tagcgcatca ggctgatttg gcgtttatca tcagtgatta acgcttgtaa
     9361 atgaactcaa cgccttcttc gtcgtcttcg tcccagtcgt catcccagtc ttcatcatcc
     9421 tcttcagcaa tctcttcaag ctgctggcga tgataatcgt cccacatgaa ttcgactttc
     9481 tctggctgtt tcgcttcttc agcctgcacg accgggtttt caaggataaa ggtcatcaca
     9541 tcccagcaga gatctttcac gcccagtccg ctcgccgcag agatcagata atatttatct
     9601 tcccagccca gcgcttcagc aatcgctttc gctttctctt cagcttctgc cttatccagc
     9661 agatcgatct tattgaacac taaccaacgc ggtttcgccg ccagatcctg gctgtatttt
     9721 tccagctcgc tgataataat acgcgcgttt tcaaccggat cggtgccgtc aatcggatcg
     9781 atatcgatga ggtgcaacag gacgcggcaa cgttccaggt gcttcaggaa gcggataccc
     9841 agacctgcgc cttccgcagc gccttcaatc agtcctggaa tatcggcaac aacgaagctc
     9901 ttttcgttgt ccattcgtac cacacccaga cttggcacca gagtggtaaa cggataatcc
     9961 gccactttcg gtttagccgc cgataccgcg cgaataaagg tcgatttacc cgcgtttggc
    10021 atccccaaca taccgacgtc agccagcagc atcagctcca gcagcagctc acgcttatca
    10081 cccggcgtac cgttggtttt ctgccgtggt gtacggttaa cggacgattt gaaacgggta
    10141 ttgcccagac cgtgccagcc gcccttagca accagcagac gctgaccgtg tttagtcata
    10201 tcgcccatgg tttcaccagt accctggtcg attacacgcg tacctaccgg cactttaatc
    10261 gtcacgtctt taccgcgctt accggtacaa tcgcggcttg cgccgttctg accgcgctct
    10321 gcacggaaag atttttcaaa acgataatcg ataagcgtgt tcaggttttc gtcggcttcc
    10381 atccatacgt caccaccatc accaccgtcg ccgccatccg ggccgccttt cggaatatac
    10441 ttttcgcggc ggaagctcac gcaaccatta ccgccatcac ctgcaacgac cagaatcgat
    10501 gcttcatcaa caaacttcat tttattctcc gtaaatcatt cgcctgcgcg gggttgcgat
    10561 accaccgttg tatgcttacg taatccgccc caaatacgat gaccaatggc ggaatacatc
    10621 gcgcccgcaa ccacgacaaa cgcaccgaga taacctaaaa ggtttaacat cggtctggcg
    10681 aagaaatcgg gccaagccag tgataaaaga tctgaaaaaa acagcgtaaa cagtggggtg
    10741 agcgtgatga tcgcgctcac ctgcgctgcc tgccagcgag ccatcgcttc cgccagggcg
    10801 ccatatccta ccaatgtatt cagtccgcaa aaaattaaac atgcgagctg ccagtggcta
    10861 agctgcgcta tcactcctgg ctttgccaga gggaagagcg caattgtaca taaagtgtac
    10921 agcaaaaaca ggatctgcgg tgaggccagc cgacgcaata aaaccttttg cgccacgcca
    10981 taactcaccc aaaccgtcgc cgcaccgacc ccaaagatga ctccccaggt gtaatcagtg
    11041 agctttgtaa atatctcgac cagactggtg ttaaaaaaca tcaccaagcc gctcaggagc
    11101 atcaatgccc ctacaacctg agtgctgcgc attttctctt tcaggataaa tacgctggca
    11161 accatcatgc caactggcga gagttgccca atcacctgcg aagcggtcgg actcaggtat
    11221 tgcaaggatg agctgaacag gatgaagttc ccaaacagcc cggcggtcgc cactgccaac
    11281 aaaatcaacc agcgtggctt acgaaacacg cgtaatggcg gcaacctctt cttcaccgca
    11341 agaatggcac caaggccaat actcgccatc aagaaacggt aaaacacgat tgtcggaggt
    11401 tccatcacct ccagcacctg cttcattgcg attggcaacg ccccccagca aattgctgtg
    11461 gtgagcgcca aaagaatgcc aatgcctgcc tgctgcttca taccgtattc cctgcaaagc
    11521 gcatttgcgg attaacgtcg caccatgcgc atttttaccg gttatcgaat gtaaaaagcc
    11581 ccgcaacgtg ttgcggggct ttcatccgtt accgggacgc gaaaaactta ttcagcttcg
    11641 atgctgataa atttacggtt tttcgggcct ttaacttcga atttcacttt accgtctgct
    11701 ttagcaaaca gagtgtggtc acgaccgcaa cctacgttag cgccagcgtg gaatttggta
    11761 ccacgttgac gaacgatgat gctacccgcc agaacggatt cgccaccgaa acgcttaacg
    11821 cccaggcgtt tagcttctga atcgcgaccg ttacgtgtgg agccgccagc ctttttatgt
    11881 gccatttgaa atctctcctc aggtcttagg cgctgatgcc agtaattttc acatcagtga
    11941 accactgacg atggccctgc tgcttacgat agtgtttacg acgacgaaac ttaacgattt
    12001 taactttctc gccacgaccg tgagcaacaa cttcagcttt gattacgccg ccatcaacga
    12061 aaggaacgcc gattttgact tcttcaccgt ttgcgatcat cagcacttca gcgaactcaa
    12121 cagtttcgcc agttgcgatg tccagctttt ccaggcgaac ggtctgacct tcgcttactc
    12181 ggtgttgttt accaccactt tggaaaaccg cgtacatata aaactccgct tccgcgcaca
    12241 ccttttcaat gattcagagt gcgctataaa tattcacaat agggcgcgaa tattacgcaa
    12301 aacgcacgcc tttgacaagt gctacagtca atacacgaag aaaaaaaaca caacttgtac
    12361 ggtaacgttt atctgtgcca ttttttcagt acaatcaccc tatattccta accataaacc
    12421 ctaagttgcc tttgttcaca gtaaggcaat cggggcgaaa agcccggctt ttgcgatgaa
    12481 tttagaaaaa atcaatgagt taaccgcgca agatatggcg ggtgttaatg cggcaatcct
    12541 tgagcagctt aattccgacg tccaactgat caatcagtta ggctattaca tcgtcagcgg
    12601 cggcggtaaa cgtattcgtc cgatgattgc tgtactggct gcacgagctg ttggctatga
    12661 gggaaatgcg catgtcacca ttgctgccct gatcgagttt atccacacgg cgactctgct
    12721 acacgacgac gttgtggatg aatcagatat gcgcaggggt aaagctaccg ccaacgccgc
    12781 atttggcaat gccgccagcg tgctggtagg cgattttatt tatacccgcg cgttccagat
    12841 gatgaccagc ctcggttcgc tcaaagtgct ggaagtcatg tcagaagccg taaacgtcat
    12901 cgcagaaggt gaagttctgc aactgatgaa cgttaacgat ccggacatca ctgaagaaaa
    12961 ctacatgcgc gttatctata gcaaaaccgc gcgtctgttt gaggctgccg cgcagtgttc
    13021 cgggattctg gctggctgta cgccggagga ggagaaaggc ctgcaggatt atgggcgcta
    13081 tctcggcact gctttccagt tgatcgacga tttactcgat tacaatgccg atggcgaaca
    13141 gttaggtaaa aacgtcggcg acgatctgaa cgaaggtaaa ccgacgctgc cgctgctgca
    13201 tgcgatgcat catggcacac cagaacaggc acagatgatc cgtaccgcca tcgaacaggg
    13261 taacggtcgc catcttctgg aaccggttct ggaagcaatg aacgcttgtg gatctcttga
    13321 atggacgcgt cagcgtgccg aggaagaagc agacaaagcc atcgcagcat tacaggtgct
    13381 cccggacacc ccttggcgag aagcactcat cggcctcgcg cacatcgctg ttcaacgcga
    13441 tcgttaatcc cctcccttca tcccgcgcag tgcgcgggat gattccagta aattccataa
    13501 aaacactaat tcagcgctat aacacctgaa aaacagggct gtgcatcttt atatattctg
    13561 aatattcaca ctctttacag gaacttttta gagcaatagg ccatcaggag tatagtgatg
    13621 cccgacagaa gaagtgttct gaatgaaagc gactaactta aggagtgagg aaagatggaa
    13681 agtaatttca ttgactggca tcccgctgac atcattgcgg gtttgcgcaa gaagggaacg
    13741 tcaatggcgg cggagtctcg cagaaatggt ttgagttcct caacgctggc aaacgcatta
    13801 tcgcgcccat ggccgaaagg agagatgatt attgcgaaag ccctgggaac tgacccctgg
    13861 gttatctggc catcacacta ccatgatccg cagacccatg agtttatcga cagaacgcag
    13921 ttgatgcgta gctacactaa accgaaaaaa tgagtggtct ggcggtagcc ccgcgaacgg
    13981 ggctgccagc tctcagacga ttactcgcct ttcacacgct caatatttgc acctaaagcg
    14041 cgcagtttgt cttcaatacg ttcgtagcca cgatcgatgt gataaatacg atcaaccacc
    14101 gttgtccctt ccgcaataca gccagccaac accaggcttg ctgatgcacg cagatcggtt
    14161 gccataacct gtgcgccaga aagtttttca acaccgtgac aaataacggt attgctctcg
    14221 atttcggcgt gcgcgcccat acggctcagc tctggcacat gcataaagcg gttttcaaag
    14281 accgtttcgg tgatgaaccc ggtcccttct gccaccaggt tcaacagcgt gaactgggcc
    14341 tgcatatcgg tcgggaatgc cggatgcggc gcggtacgta cgttaacagc cttcggacgt
    14401 ttgccatgca tatccaggct aatccagtct tcgccgactt cgatgtccgc tccagcgtca
    14461 cgcagtttcg ccagcacggc gtcgagagta tctggctgcg cgttacggca gataattttg
    14521 ccgcgagaaa tcgccgccgc caccaggaaa gtaccggttt cgatacgatc cggtagcacg
    14581 cgatagacac cgccgcctaa acgttccaca ccttcgatga cgatacgatc ggtgccctga
    14641 ccgctaattt tcgcacccag cgtaatcagg aagttcgcgg tatcgacgat ttccggttca
    14701 cgcgctgcgt tttcaataat cgtggtgcct tccgccaggg ttgcagcaca catgatggtc
    14761 accgttgcgc caacgctgac tttatccatc acgatatgtg cgcctttcag acgaccatcg
    14821 acggaagctt taacgtaacc ttcttccagt ttgatggtcg cgcctaattg ttcgaggcca
    14881 gaaatgtgta gatcaaccgg acgtgcacca atcgtacaac cgccaggcag tgaaacttgc
    14941 ccctgaccaa agcgcgctac cagcggcccc agcgcccaga tagaagcacg catggtttta
    15001 accagatcgt aaggtgcgca gaatacatta acgtcgcggg catcaatatg cacagaacca
    15061 ttacgttcta ctttcgcacc cagctggctt agcagcttca ttgatgtatc gacgtctttc
    15121 agtttcggga cgttctggat ctctaccggt tcttccgcca gtagtgcggc aaaaaggata
    15181 ggcagagcag catttttagc gccggaaatt gtgacttcgc cctggagctt cgttggcccc
    15241 tgaacacgaa atttatccat ttagtttgtt ctcagttaac aattcatatc cgctaccggc
    15301 gaatcgccca tagctcaaaa gccgttcagt ttgcgatcgc gcgcccactc cgcaggggta
    15361 tacgctttga tcgacacagc atgaatgcgg ttatccgcaa tatattccat cagcgggcca
    15421 tagaccgtct gctgtttttt aacccgactc atgccgtcaa acaactcacc cacggcaata
    15481 acctgaaagt ggctgccatc gccggaaacg tggacttcct ggagggagag agcgttcatc
    15541 aacacgctct gaatttcatt attttccatg ggatcttcaa tcatcagtta ataaaccagc
    15601 gaaacatctt agagcaaagt tgcgctggca taaataagca aaaagcctcg ctgataaatc
    15661 agacaaggct cgacttgcag gcaggtttgc cggacaggcg gttaacgcca tatccggcct
    15721 gaaaaaattt aacgaggcag aacatcagca ggcaaattat acaatttcga gagggtatac
    15781 actttgtcgt ttaccccctg aagcgtcacg ttgttgccct gctttttcgc cagatcgata
    15841 agatggagca gcagtgccag tccacccgta tccacgcggg acacacggct aagatcgatg
    15901 caggtaaccc ccttaaccgc ttcctcacgc atttcccaaa gcggtagcag aacgtcctga
    15961 tccagctctc cggataacgc cagcgtgtca cccgtctgca tccagctcag tgactcgctc
    16021 attatttttt ctcttccaga gtgattttct gttgagaaat cgatttcagt tgcgcagtca
    16081 ggccgtcgat acctttggta cgcagcagcg ttccccactc gttttgtttg gtggtgatca
    16141 tactgacgcc ttcagcaatc atgtcgtaag cctgccagtt gcccgtctgg gagtttttac
    16201 gccactggaa gtccagacgc accggcgggc ggccattcgg gtcaataatg gtaacgcgaa
    16261 taggcacaat ggttttatca cccagcggct gttctggcgc aatctgatag gtttgaccgt
    16321 gatacatcgc cagcgcctga ccgtaagcct gcttcaggta ctcacggaaa gcggcaaagt
    16381 aggcttcacg ttgagctggg gtcgcactct tgtaatactg ccccagcacc agcgcaccgg
    16441 cgtattttac ctgtacgtat ggcagcagtt cctgatcaac aatggtacgc agataatccg
    16501 ggttggcccg aatttgcggt tgctcattct tcaggcgatc gaacgttttc tgcgccgcct
    16561 catccatcag cttatacgga ttggtctggt ctgccgcggt tgccgcactc agcggtgcaa
    16621 tcaccagcaa agcgaccatc attaaacgtt taaacatgcg tcggttctcc tgaaattatt
    16681 tcgttgtacc cacaggttca gtggtttcat tattacctgg cgcagttgct ggcgcatcgc
    16741 cactattctt attgtcatcg cctttactac cgtaaaggaa ctgaccaatg agatcttcca
    16801 gcaccatcgc agacttggtg tcctgaattg tatcgccatc cttcaggata gcagtcccca
    16861 gttccgggtc ttcaaaaccg acgtttaatg ccagatattg ttctcccagc aggccggaag
    16921 tacgaatgct cagcgaactg gtatcaggaa tgtggttata acgttgttca atttccagcg
    16981 ttacgcgtgg cagataggtt ttagggtcca gcgtaatatc cgccacccgg cccacaacaa
    17041 caccaccaat gctgaccgga gagcgcgctt tcaggccgcc aatgttatcg aacgtcgcat
    17101 aaagcgtgta ggtcggttca gtacgtatgg acgtcacgtt cgccgccttc aggcaaacaa
    17161 acagcgccgc cagtagtgct gctaataaaa agatacccac ccaaatttca ttttttttcg
    17221 tttgcatgaa ctcaattccc aaacatcaat gcggtcagca caaaatccag ccccagaaca
    17281 gccagagacg agtggacaac ggtgcgagtg gttgcccggc taatcccggc agacgtcggg
    17341 atggcgtcgt agccgttaaa caacgaaatc cacgtcaccg tgatggcgaa caccacgctc
    17401 ttaatcagac agttgaccag atccatacgc cagtcgacgg cattttgcat tgccgaccag
    17461 aagaacccgc tatcaatgcc tttccaactg acgccgacca gagatccgcc ccagatcccc
    17521 acggcgacga agataaccgt caacagtggt aatgaaataa ccccagccca gaaacgggga
    17581 gaaataaccc gacgcagcgg atccaccgcc atcatctcca tactggagag ttgctctgta
    17641 gcgcgcatca ggccgatttc tgcggttagc gccgaaccag cacgcccggc aaacaacagc
    17701 gcggcaacca ccggccccag ttcacgcagt agcgataacg ccaccagcat acccagactg
    17761 gtttccgcac tataagtggt cagaaccaga taaccttgca gccccaacac cattccgatg
    17821 aacacgccag aaactacaat aatcagcatc gacaggacgc cgacattata aagctggcgc
    17881 accagcagcg gcgcatgttt gcgaaattcc ggtttgccga ccagcgcatt gaataacatt
    17941 aacccggccc gcccgaacgt tctcagggtt ttaatccctt tatgtccgag cgacgccagc
    18001 gcatttaaca gcatgagtgg cttaactccc tggtaaaaga tcagcgtgat aatcgccggc
    18061 aggatagcgg aacggaacag gcccgtcagc tatcccgtcc agaaactgac gtacgcgcgg
    18121 atcaggattc gcctgcaacg cctgggcact gccatgagcg acaatttttt tgtccgccag
    18181 gatccaggcg tgatccgcaa tacttaacac ttccggcaca tcgtgagaaa ccaccacaca
    18241 agtcacgccc agcgcgctgt tcagctcaga aatcagcttc accagtacgc ccatggtgat
    18301 gggatcttgc ccaacaaaag gttcatcaaa catgataaga tccggctcca gcgcaatcgc
    18361 acgcgccagc gctgcacgcc gcgccatccc accggaaagt tcagaaggca ttagcttagc
    18421 cgctccacgc agccccacgg cctccagctt catcatcacc gtactatgca acaacggcgc
    18481 gggaagttgg gtatgttcgc gcagtggata ggcgacgttg tcaaatacgt tcatatcagt
    18541 gaacaacgcc ccggactgaa ataacatgct catccgtttg cgcactgtat acaggcgcga
    18601 acgagacatc gccggaatat tctcaccatc gaaaaggatc tcaccatgat ctggtgcgat
    18661 ttgcccgcca atcagacgga gtagcgtcgt tttaccgatg cccgatggcc ccatgatcgc
    18721 cgtgatcttc cctcgcggca cggtcaggga aatattatcg aagatgcagc gattgccacg
    18781 cgtaaaactg acatcgcgca tatcgactaa attcgccaca gactgctcca taattcaccc
    18841 ttcgtcttgc gttgattttc taagcatggc gctcaattta accttgaacc caacatattt
    18901 acagaatatt acccgccatg gttagcgaaa gctggcattt gttttacttt ttagccgcat
    18961 aaagtcaaaa ttaagaatcc gttacggctt tctgaaaatc ttcagcggac cggcgagtat
    19021 acctgaagaa aggacgttag atgcttttag ctacggcact gttaattgtt ggtttacttt
    19081 tggtcgttta cagtgccgac cgcctggttt ttgccgcgtc tattctttgc cgaacctttg
    19141 gcatcccgcc gctgatcatc ggcatgacgg tggtcagtat tggtacatcg ttaccagaaa
    19201 tcatcgtctc gcttgccgcg tctctgcacg aacaacgcga tttagccgtt ggtacagccc
    19261 tcggctcaaa cattatcaat atattgctga tcctcggtct ggctgcgctg gttcgtcctt
    19321 ttaccgtcca ttctgatgtt ctacgccgtg aattaccctt aatgttgttg gtcagcgtgg
    19381 tggccggttc cgtactctat gacggacaac ttagtcgaag cgatggtatc tttctcctct
    19441 ttctggctgt gctatggctg ctgttcattg ttaaacttgc acgtcaggct gaacgtcagg
    19501 ggactgacag cctgaccaga gagcagcttg cagagctgcc gcgtgacggc ggattgcccg
    19561 tcgcgttttt atggctcggc attgcactta tcatcatgcc agtggccacg cggatggtgg
    19621 ttgataacgc cacggtgctg gcgaattact ttgccatcag cgagttgacg atgggtctga
    19681 cggcaattgc tatcggaacc agcctgccgg aactggcaac cgcaatagcg ggggttcgca
    19741 aaggtgaaaa cgacattgct gtcggaaata tcattggcgc aaacattttt aatattgtca
    19801 tcgtgttggg tttacccgcg ctgataacgc caggagagat tgatccactg gcgtacagtc
    19861 gtgactacag cgtgatgttg ctggtgagca ttatttttgc gttgctgtgc tggcggcgct
    19921 ccccgcaacc gggccgtggt gtaggggtat tattaactgg cggatttatc gtatggctgg
    19981 cgatgttgta ctggttatcg ccaatactcg ttgaataact ggaaacgcat tatgtcgcac
    20041 gtagagttac aaccgggttt tgactttcag caagcaggta aagaagtcct ggcgattgaa
    20101 cgtgaatgcc tggcagagct tgatcaatac atcaatcaaa atttcacgct tgcctgtgaa
    20161 aagatgttct ggtgtaaagg gaaagttgtc gtcatgggga tggggaaatc ggggcacatc
    20221 gggcgcaaaa tggccgcaac gtttgccagc accggtacac cttcattttt cgtccatcct
    20281 ggtgaagccg cgcatggtga tttaggcatg gtcaccccac aggatgtggt gattgctatc
    20341 tctaactcag gtgaatccag cgaaatcacg gccttaattc cagtgcttaa gcgtcttcac
    20401 gtaccgttaa tctgcatcac cggtcgcccg gagagcagca tggcgcgcgc cgcagatgtg
    20461 catctgtgtg ttaaagtagc gaaagaagcc tgtccgttag ggctggcacc gaccagcagc
    20521 accaccgcca cgctggttat gggcgatgcc ctcgctgtcg cgctgttaaa agcacgcggc
    20581 tttactgctg aagattttgc gctctcacac ccaggcggcg cactgggtcg taaacttctg
    20641 ctgcgcgtaa acgatattat gcatacgggc gatgagatcc cgcatgttaa gaaaacggcc
    20701 agtctgcgtg acgcgttact ggaagttacc cgcaaaaatc ttggtatgac tgtcatttgc
    20761 gatgacaata tgatgattaa aggcatcttt accgacggtg atttacgccg tgtcttcgat
    20821 atgggcgtgg atgttcgtca gttaagtatt gccgatgtga tgacgccggg gggaatacgc
    20881 gtgcgccctg gcattctggc cgttgaggca ctgaacttaa tgcagtcccg ccatatcacc
    20941 tccgtgatgg ttgccgatgg cgaccattta ctcggtgtgt tacatatgca tgatttactg
    21001 cgtgcaggcg tagtgtaaag attcaaggat aaacaacaat gagcaaagca ggtgcgtcgc
    21061 ttgcgacctg ttacggccct gtcagcgccg acgttatagc aaaagcagag aacattcgtc
    21121 tgctgatcct cgatgtcgat ggcgtactgt cagatggcct gatttatatg ggcaataatg
    21181 gcgaagagct gaaagcgttc aatgttcgtg acggttatgg cattcgttgt gcgctcacct
    21241 ctgatattga agtcgctatc attaccgggc gaaaggctaa actggtagaa gatcgttgtg
    21301 ccacattggg gatcactcac ttgtatcagg ggcagtcaaa caaactgatc gcctttagca
    21361 atctgctgga aaaactggcg attgccccgg aaaatgtggc ttatgtcggc gatgatctca
    21421 tcgactggcc ggtaatggaa aaagtgggtt taagcgtcgc cgtggccgat gcgcatccac
    21481 tgttgatccc gcgcgccgat tacgtgacgc gcattgctgg cggtcgtggc gcagtgcgcg
    21541 aagtttgcga cttattactc ctggcgcagg gcaaactgga tgaagccaaa gggcaatcga
    21601 tatgagtaaa gccagacgtt gggttatcat tgtgctatca ctggcggttc tggtgatgat
    21661 cggcattaat atggccgaaa aagacgatac cgcccaggtg gtcgtcaaca acaatgatcc
    21721 cacctataaa agcgagcata cggacacgct cgtctataac ccagaagggg cactaagcta
    21781 tcgattgatt gctcaacacg ttgaatatta ttccgatcag gccgtttcgt ggtttacgca
    21841 gccggtactt accacgtttg ataaggataa aatcccgaca tggtccgtaa aagcagataa
    21901 agccaagctg accaatgacc ggatgctcta tttatatgga cacgttgaag tcaacgcact
    21961 tgtgccggac tctcaacttc gcagaatcac gacggataac gcgcagatca atctggtgac
    22021 gcaggatgtt acctctgaag acctcgtcac gttatacggg acaacattta actccagcgg
    22081 tctgaaaatg cgcggcaact tacgcagcaa gaacgccgag ctgattgaaa aggttagaac
    22141 atcctatgaa attcaaaaca aacaaactca gccttaatct tgtgcttgcc agctcacttc
    22201 tggccgccag cattcctgca tttgccgtaa ccggagacac tgatcagccg atccacattg
    22261 aatcggacca gcaatctctt gatatgcaag gcaacgtggt tacctttacc ggtaatgtca
    22321 tcgtcaccca gggcaccatc aaaattaatg ccgacaaagt ggtcgttacc cgtccgggcg
    22381 gcgaacaagg taaagaagtg attgacggct acggtaaacc ggcaacgttc taccagatgc
    22441 aggacaatgg taaacccgtt gaaggtcacg cttcccagat gcactacgaa ctggcaaaag
    22501 attttgtcgt tctgacgggt aatgcttatc tgcagcaggt cgatagcaac attaagggcg
    22561 ataagatcac ttacctggtg aaagagcaga aaatgcaggc tttcagcgac aaaggcaagc
    22621 gcgtaaccac cgttctggtg ccgtcgcagt tgcaggacaa aaacaacaaa ggccagaccc
    22681 cggcacagaa gaagggtaat taattcgtta tggcaacatt aactgcaaag aaccttgcaa
    22741 aagcctataa aggccgtcgc gtggtagaag acgtcagcct gaccgtcaac tccggggaaa
    22801 ttgtcggtct gctggggcca aacggtgccg gtaagaccac cactttctac atggttgtag
    22861 gcattgtgcc gcgcgatgcg ggcaacatca ttattgatga tgacgatatc agtctgctgc
    22921 ctctgcatgc acgcgcgcgc cgcggtatcg gctatctgcc acaggaagcc tccattttcc
    22981 gtcgcctcag cgtttacgat aacctgatgg cggtactgca aattcgtgac gacttgtctg
    23041 ctgaacaacg tgaagaccgc gcgaacgagc tgatggaaga gtttcacatt gagcacctgc
    23101 gtgacagcat ggggcagtca ctctccgggg gtgaacgtcg ccgtgtagaa attgcccgcg
    23161 cactggctgc gaatccgaaa tttattctgc tcgacgaacc gtttgccggg gttgacccga
    23221 tctcggttat cgacattaaa cgcatcattg aacacctgcg cgacagcggc ctgggcgtac
    23281 tgatcactga ccacaacgtg cgtgaaacac tggcggtttg tgaacgcgct tatatcgtca
    23341 gtcaggggca tttgatcgcc cacggcacgc ctacagaaat cttacaagac gaacacgtta
    23401 agcgtgtata ccttggggaa gacttcagac tctgataggg tagaagtttg cgacgtttta
    23461 gcaggagagt acgattctga acatgaagca aggtttgcaa ctcaggctta gccaacaact
    23521 ggcgatgacg ccacagctcc aacaggcaat tcgtctgttg cagttgtcga cgctggaact
    23581 tcagcaggag ctacagcagg cgctggagag taatccgctg cttgagcaaa tcgacactca
    23641 tgaagaaatc gacacccgcg aaacgcaaga cagtgaaacg ctggacaccg ccgacgcgct
    23701 cgaacaaaaa gagatgccgg aagatttgcc gctcgatgcc agttgggaca ccatttacac
    23761 cgcaggtaca ccatccggca ccagtggtga ctacattgac gacgagctgc cggtctatca
    23821 gggcgaaacg acgcagacct tgcaggatta cctgatgtgg caggtcgagc tgacaccgtt
    23881 ttccgacact gaccgcgcta ttgctacctc tatcgtcgat gccgttgatg acaccggtta
    23941 tctgactgtc ccgctggaag atattctcga aagtatgggc gatgaagaga tcgacatcga
    24001 cgaagttgaa gccgtcctta agcggataca acggtttgat ccggtcggtg tggcggcaaa
    24061 agatctgcgt gactgcctgc tgatccaact ctcccaattc gataaaacca cgccgtggct
    24121 ggaagaggcc agactgatca ttagcgatca tctcgatctg ttagccaatc acgacttccg
    24181 cactttaatg cgcgtcacgc gtctgaaaga agatgtgctg aaagaagccg tcaatctgat
    24241 ccagtcgctc gatccgcgcc ccgggcagtc gatccagact ggcgaacctg agtatgtcat
    24301 tccagatgtg ctggtgcgta agcataacgg tcactggaca gtagaactca acagtgacag
    24361 cattccgcgt ctgcaaatca accagcacta cgcctcgatg tgcaataacg ctcgcaatga
    24421 tggtgacagc cagtttatcc gcagcaatct gcaggatgcc aaatggttga tcaagagtct
    24481 ggaaagccgt aacgatacgc tactgcgcgt gagtcgctgt atcgttgaac agcagcaagc
    24541 cttctttgag caaggcgaag aatatatgaa accgatggta ctggccgata tcgcccaggc
    24601 tgtcgaaatg catgaatcga cgatatctcg cgtgaccacg caaaaatacc tgcatagtcc
    24661 acgaggcatt tttgaactga agtatttctt ttccagtcac gtcaataccg agggcggcgg
    24721 cgaagcttcc tccacggcga ttcgtgcgct ggtgaagaaa ttaatcgcgg cggaaaaccc
    24781 agcgaaaccg ttgagcgaca gcaagttaac ctctttgctg tcggaacaag gtatcatggt
    24841 ggcacgccgc actgttgcga agtaccgaga gtctttatcc attccgccgt caaaccagcg
    24901 taaacagctc gtttgaccca accgataagg aagacactat gcagctcaac attaccggaa
    24961 ataacgtcga gatcaccgag gcactgcgcg aatttgttac agccaaattt gccaaacttg
    25021 agcaatattt tgaccaaatc aaccaggtct atgttgttct gaaagtggag aaagtcaccc
    25081 acacctcaga tgcaacactg catgtaaacg gtggtgaaat tcatgccagc gcggaaggtc
    25141 aggacatgta cgctgccatt gatggcttaa ttgataagct ggcacgccag ttgaccaaac
    25201 ataaagataa actgaaacaa cactaattgt ccgggcaatt agcatgtgca tggcggcctg
    25261 ttgtgcggca caacgggcca tttgtacggt taatgctccg agcctgttcc actgtttgag
    25321 tgggcaggtt cttaggtgaa attatgacaa ataatgatac aactctacag cttagcagtg
    25381 ttcttaacag ggaatgtacg cgaagccgcg tccactgtca gagcaaaaaa cgcgccttgg
    25441 aaatcatcag cgagctggcg gcgaaacaac ttagcctgcc gcctcaggtg gtttttgaag
    25501 ctatcctgac gcgggaaaaa atgggcagta ccggtatcgg caatggtatt gccattccgc
    25561 atggcaaact ggaagaagat actctgcgtg ccgttggcgt tttcgttcag ctcgaaacgc
    25621 ctatagcttt cgatgccatc gacaaccaac cggtggactt actttttgcc ctgctggtgc
    25681 cggcagacca aactaaaacg cacctgcata ctctgtcgct ggtggcgaaa cgtctggcgg
    25741 acaaaaccat ctgccgccgt ttacgcgcag cccagagcga tgaagagctg tatcaaatca
    25801 ttacggatac cgaaggtact ccggatgaag cgtagttatt cggtaatgtc tcttttagac
    25861 gttgtgagga gaaacagtac atggtactga tgatcgtcag cggacgttca ggttcaggta
    25921 aatctgtcgc cctgcgtgcg ctggaagata tgggttttta ctgcgtggat aaccttcccg
    25981 tagtgttatt acccgatctg gctcgaactc tggccgatcg cgagatttct gccgccgtca
    26041 gcattgatgt tcgtaatatg ccggagtcac cagaaatatt cgaacaggcg atgagtaacc
    26101 tgcctgacgc tttctcaccg caactactgt tcctggatgc cgaccgtaat accttaattc
    26161 gtcgttacag tgacacgcgc cgactgcatc cgctttccag caaaaacctg tcgctggaaa
    26221 gtgctatcga caaagaaagc gatctgctgg agcctctgcg ttcgcgagcg gatctgattg
    26281 tcgatacctc agaaatgtcc gttcacgagc tggctgaaat gctgcgtacc cgtctgctgg
    26341 gtaaacgtga acgcgaactg accatggtct ttgagtcttt cggcttcaaa cacggtatcc
    26401 ctatcgatgc agattacgtc tttgacgtgc gcttcttgcc gaacccgcac tgggatccga
    26461 aactgcgtcc aatgacaggt cttgataagc ctgtcgccgc gttcctcgac cgccacacag
    26521 aagtacacaa ttttatctac cagacgcgaa gctatcttga gctatggtta cctatgctgg
    26581 aaaccaacaa ccgtagctac ctgacggtcg ccattggttg taccggcggg aagcaccgtt
    26641 cggtgtatat tgcagagcaa ctggcagact acttccgctc gcgcggtaaa aacgtccagt
    26701 cacgccatcg tacgctggaa aaacgtaaac catgaccgtc aagcaaactg ttgaaatcac
    26761 aaacaagctg ggcatgcatg cccggcctgc aatgaagctg tttgaattaa tgcaaggttt
    26821 tgacgcagaa gtgctgttac gtaatgacga aggcaccgag gccgaagcca acagcgttat
    26881 tgcgctgctg atgttggatt ctgccaaagg acggcagatt gaagttgaag cgaccggccc
    26941 acaggaagag gaagcactgg ccgccgttat cgccctcttt aactctggtt ttgatgaaga
    27001 ttaatcttca tcactttgac atacaactcc cttcaaactc cccccgacaa taagaaaatc
    27061 acgtactgaa atcgttctca atcaacgtca tttgtacatt ttgtgcgctt ttcactttca
    27121 gaagaacctt aagaaaacct taagaggcat tgtttaggtt ttgtttaagt taatcgacca
    27181 tactggagat cgtcagaaaa tatttccagg agatggcatg attcgcttat ctgaacaaag
    27241 tcccctgggc accggaagac atcggaaatg ttatgcgcat ccggaagatg cccaacgctg
    27301 tatcaagatt gtctaccatc gtggcgatgg tggcgataaa gagatccgcc gtgagttaaa
    27361 gtactacgcg catcttggtc gccggttaaa agactggagt ggaataccgc gctatcacgg
    27421 taccgttgag acggattgcg gaaccggtta tgtctacgat gtgattgcag attttgacgg
    27481 caaaccctcc attacgctga ccgaatttgc tgaacaatgc cgttacgaag aagacattgc
    27541 acaactgcgc cagctactga aacagctgaa gcgttatttg caggataacc gtatcgtgac
    27601 gatgtcgctg aagccgcaga atatcctctg tcatcgcatc agtgagtcag aggttatccc
    27661 cgtcgtctgc gacaacattg gtgaaagcac attgattcca ctggcaacct ggtcgaagtg
    27721 gtgttgtctg cgtaagcaag agcggttatg gaaacgattt atcgcccaac cggcgctggc
    27781 tattgccctg cagaaagatc tgcaacctcg tgagagcaaa acgctggccc tcacttcgcg
    27841 cgaagcttaa tccagctggt gttgttgcat aaactgctca ccgcctaact gatacatctg
    27901 ccgtaaaatc cacgcctgac ggctatgcac gtagcccgat ggcgcggaga ctttgaaacg
    27961 aagtggatta ggtaatacag ctgccagtaa tgcagcttcc gatcgggtaa gtttgctcgc
    28021 gggtttgtgg aaataacgtt gtgccgcagc ttcgacgcca aacacaccgt cgccaaattc
    28081 ggcgatattc aggtaaaccg tcaggatacg ctttttgctc cagaccgttt ctatccccag
    28141 cgttaatcca gcttccagcc cttttcgtac ccagctacgc ccatcccata aaaagagatt
    28201 tttggctgtc tgctgagaaa tcgttgatgc accgcgaata cggttttcat tgcgctcgtt
    28261 gtgcgccagg gctttctcaa tggaagcgac atcaaagccc cagtgctcag gaaatttctg
    28321 atcttctgcg gcaatcaccg ccagtcccat ccatggcgag atttgatcca tactgaccca
    28381 gtcagaatat gccacgtaac gaaaattgcc atgcagccag gcgctgacct gtcgctcgac
    28441 cattaccgct gagaagggaa caggcgcaac gctaaacaac gcgatgcccc cgccccagaa
    28501 aacggcgagg acaaccatta accgcaaaag aaaacggcga acgaaactaa acaccgttaa
    28561 gcggctttta ctcattcagc cagaaccagc acgcgggata ccagcttatc aatgccgctc
    28621 gccgcttctg caatgttctg cgccagcata tatgctgggg tggtgacaat cttattgtct
    28681 tcatcaacca cgatatcatc gacaggacag ggcacatgct ccgcgcccat ctcttccagc
    28741 acttctgcgg tatcgatatc agtaccgatg gtcaaacgca gcgggaaatc gaaaattttc
    28801 ggcagcatcg ccggggcaat acacataaaa ccaagcggtt ttccggcctg atgcatcgct
    28861 tgtgccaacg cctttaattc acggtcaacg gtgcattcgc taccaagact ggcaaaattg
    28921 cttaaattct tcgccgcgcc aaaccccccc cggcacaatc aacgcatcca gttcagcggc
    28981 atcggcctgg gccagaggac ggatttcacc gcgcgttatt cgtgccgctt caatcagcac
    29041 attgcgcgtt tccgtcatcg cttcgccagt taaatggttg ataacatcaa cctgctgctt
    29101 atccggtgca aagcagaccg cctgcgcacc gctgcgtgaa atagctaaca acgtcaacac
    29161 cgcttcatga atttcagaac cgtcatagac gccgcatccg ctcagaatta cgccaatttt
    29221 cttcattgtg atcatccttt cgcaattgac tgaaacacat taattttttt aataaaaatg
    29281 gtacgcatca cacatttaac tgattcatgt aacaaatcat ttaagttttg ctatcttaac
    29341 tgcgtgcggc ctgaaaaaca gtgctgtgcc cttgtaactc atcataataa tttacggcgc
    29401 agccaagatt tccctggtgt tggcgcagta ttcgcgcacc ccggtctagc cggggtcatt
    29461 ttttagtggc ttttgccacc cacgctttca gcacttctac gtcgtgacgc cactcttctt
    29521 tcatctcttc aatccattca ccgacgttat cttcccaggc aggaagttca ggagactgaa
    29581 tttgctgacc cagctgttgc agatggcgta accccactga ccccgccgca cctttaattt
    29641 tatgtccttc ctcaacaatg ccttttttat cctgcgccgt cagattcgac tccagcacgc
    29701 tgacatagcc cggcatcatc ttctcaaaca ccgctaaccc gtcggtgatc agcttcggtc
    29761 ctacaagttc gagatactgt tccagcatgg gaatatcgag caatgcttct gatttactgt
    29821 tctcttctgt cgtcaccgta ctctcctcat catcctgggt atcccagaat ttcttgatca
    29881 tcgcggttag cgccggaaca gaaagcggct tactcagcac atcatccatt ccagcattga
    29941 ggtactcttg tttgtctttc agcacgttag cggttaaggc caccagcggc ggtaaatcct
    30001 cgcgcggata acgtttcgtc agttcacgag agatatccag cccggtcata tctggcaact
    30061 gaatatccag caacaccagg tcgtattcgc ccggtttaaa catctccagc gccgccttgc
    30121 cggtcatggc gacatcaacg ctgttaccta atttttccag cacagaacgc gcaacaatca
    30181 cgttcagttc aatgtcttcc accagcagca cattcagcgc cggtaaaggc atatcgtctt
    30241 catcaaacgc atcatcgacc tcttctgcca ccgacggtgc gtggatcgtc aacgtaaagg
    30301 ttgaaccttt gccctgttcg ctggtaaccg taatatcgcc gcccatattt ttcgccagac
    30361 gacgagaaac ggccagacca ataccggtgc cggtggcagg tttaccgcca tgactgtctt
    30421 tcacctggta atacatggcg aagattttat ccagctcatc ctgcggaatg ccgataccag
    30481 aatcttccac ttcaaaatgc agcatatcgc cttcatcgta gcgcacgcgc acggtaacct
    30541 ggccttgctg ggtgaatttg acggcgttac tgatgaggtt ccacaggatc tgccgtaaac
    30601 gcgtcccgtc ggtaatgacc tgatgcggta atggcagcgt aggctccagg ttaaagcgca
    30661 atcctttttg ttgcgcctgc aaggcggaga gattttccag atcggcaagg aagctggtga
    30721 aatcaaccgg ctgattatca agctggacct tgcgccgttc catcttatcc atgtcgataa
    30781 tatcgttaaa gatattcccc agcgtgacgg ccgaaacatg gatagttttg agatattttt
    30841 cctgctcggc ggtgagttcg gtatccagca gaatgcggct caggccgacg ataccgttca
    30901 gcggtgtacg caattcgtga ctgatggtgg aaataaacgt cgttttgtcg cggctggcgc
    30961 gttcaagcgc atcctgatac cgcttacgct cggtaatgtc gcgaccaaag cccatcaaac
    31021 cgtgacgttt acccacgcgg tcgtagtacg gcactttacg gatttcaaag caggctttgc
    31081 gcccgtccgg gtaatccagc cactgttcat aggtcagtga cacattatga cggaacactt
    31141 tttcatcggt ttcaatgact tttgcggcgg cttccggtga gtaaacatca gcaggtttca
    31201 ggtgaaccag ttgtttttcg ctttttccgg tcagcagctc catcgcgcgg ttacagccgg
    31261 aaaactcttt atcttcgtta cgataaaaaa ccaggtcggg tgaagcatca aggaaggaac
    31321 gtaagaatga ggattgctgc tcgagctgaa tttgtgtctc ttcgcgctct ttgatttcaa
    31381 ttttcagttg gccgaaggtt tcctgcagtt ctgcttccgc tttttcacga acggcaattt
    31441 cctgatttag ctgggcaata ttatctttta actgaacgtt gaggctcaaa tcgcgctcgc
    31501 gcatctcctc cagtttttgc accagccgtg acagacgttg tcgtgactcc tccagttgct
    31561 cgacgaccac cgatagaaag tagaccgccc acggcgtaat cagcaaacca aagaagatag
    31621 aacgaataac atcaatgctt tcgacctgac catgcagcac catggttacc gccatttgta
    31681 ccacaatggc aagaacgacg agggccagcg ccagcaacat tgagaagcgc accagaccta
    31741 acttcatcat caggtcaaca taatactgcg ccagcagacg aatttgcttc attagggaat
    31801 tccttcacga caacctgccc caataatacc caattctgac agttacgtta taaattgtgt
    31861 gagaaatgcg gaattcccct caacgaccta ctccgttgga ggtagccacg gacgtcccag
    31921 cgccgatccc tgtacgccat gttcattcag atagcgatcc agctcgacca ttcccgccca
    31981 tcgattttcg caccacagag gagcaagcag cgtcgggcga cgggcgctgg cggaaatgcg
    32041 gtggtagatc acttccggtg gcgtatggcg aatcatttct ccggcagtga gcgtgtaatc
    32101 ctccagttca ataccgttca aacgccccgc ttcccaggct ttcgccataa tgctgccttt
    32161 cacaatatgc agcggatgca gctttatgcc gtccacgccg gtttcaacca ctcgctccag
    32221 cgtttgcaaa cattcagcct gcccttcgcc aggcaggccg acaattaagt gggaacacac
    32281 cttcagcccg cgctgacgtg ccagctgggt tgtacgctga taacaggcaa aattatggcc
    32341 gcggttgatg cgatgcagtg ttttgtcgtg ggcggtttgt agccccagct ccagccacac
    32401 ttcgtaaccc tggtccttat attcgcaaag cagatccagc accgcatccg gcacgcagtc
    32461 cgggcgggta ccaacacaca aaccgacaat attggcctgg ctcaccgcct gctgatacat
    32521 agaacgcagc acctgaactt ccgcaaaggt gctggtatac gcctgaaagt aggccagata
    32581 gcgtttagcg cggttaacta aattcgcctg gtgcgccagt tgctcggcaa tggaacgatg
    32641 ctgctgcgct tcatcagcaa acgaggccac attacagaat gtgcagccac cacgcccgat
    32701 ggtaccgtca cggttagggc agctaaaacc gccgtgcagc gtcagcttat gcaccttttg
    32761 cccataacga cgggtgagat caccaccaaa catattgact aatttctgta actgcataat
    32821 ctgatagacc gcgccttgaa aagaggccaa agcctgccat ttttagctca attcggcgat
    32881 gacctggatc aatcgtcccg gcctgctttt atcaaccgca taatcaatca aaattaccga
    32941 aatttcatgc ataatcacat aaatcacttt tgcttatctt gtgtcagatt tttttatctc
    33001 cttatggatt ttaggcaaaa acagtagcat gaaacgtcat taccaattaa ggcagtataa
    33061 aatgctggtt ttctcgtcag ttcaaggcag gataagggtt aacacgcctt tatgacagtc
    33121 aggaattggc tgtttctcta acgacgccct tttagcctta attagaaaat ccattttaat
    33181 ttcagtcaat taataaagaa ttttgcgcta aagcacattt ctgtaccaat aagcttgcca
    33241 tttgacctgt atcagctttc tcgataagtt ggaaatccgc tggaagcttt ctggatgagc
    33301 agcctgctca tcatatttat gcagtaattg agatcccctc ttcaccgtat taaccgatgc
    33361 gaaaaggaca acaagggagc gaatgcgagg cgcgcgtatg atacgcaaac cccgtcgcca
    33421 cgctctttct gtgcccgtgc gcagcggttc ggaagtgggg ttcccgcaga gcctggggga
    33481 ggttcacgat atgttgtacg ataaatccct tgagagggat aactgtggtt tcggcctgat
    33541 cgcccacata gaaggcgaac ctagccacaa ggtagtgcgt actgcaatac acgcactggc
    33601 ccgcatgcag caccgtggcg cgattctcgc cgatggtaaa accggtgacg gttgcggctt
    33661 gctgttacaa aaaccggatc gcttttttcg catcgttgcg caggagcgcg gctggcgttt
    33721 agcgaaaaac tacgccgtcg ggatgctctt cctgaataaa gatcctgaac tcaccgctgc
    33781 cgcacgccgc atcgttgaag aagagctgca acgcgaaacc ttatcgattg tgggctggcg
    33841 tgatgtcccc accaacgaag gcgtgctggg tgaaatcgcc ctctcctctc tgccacgcat
    33901 tgagcaaatt tttgtgaacg ccccggcagg ctggcgtccg cgcgatatgg agcgccgtct
    33961 gtttatcgcc cgccgccgca ttgaaaagcg tctcgaagcc gacaaagact tctacgtctg
    34021 tagcctgtcg aatctggtga acatctataa aggtctgtgt atgccggcgg atctgccgcg
    34081 cttttatctg gatcttgcgg acctgcgtct ggaatcggcc atttgcctgt tccaccagcg
    34141 cttctccact aacaccgtac cgctctggcc gctggcgcag ccgttccgct atctggcgca
    34201 taacggtgaa atcaacacca tcaccggtaa ccgccaatgg gcgcgtgcgc gtacctataa
    34261 attccagacg ccgcttatcc ctgatctgca cgacgccgcg ccgttcgtca acgaaaccgg
    34321 ctctgattcc agttccatgg ataacatgct ggaactgctg ctggcaggcg ggatggatat
    34381 catccgcgcc atgcgtctat tagtaccacc cgcctggcag aacaacccgg atatggaccc
    34441 ggaactgcgt gccttctttg actttaactc catgcatatg gagccgtggg atggtccggc
    34501 gggcatcgtg atgtccgatg gtcgcttcgc tgcctgtaac ctcgaccgta acggtctgcg
    34561 tccggcacgc tacgtcatta ccaaagataa gctcatcacc tgcgcctctg aagtcggtat
    34621 ctgggattat cagcctgacg aagtggtcga aaaaggccgc gtcgggccag gcgaactgat
    34681 ggtgatcgac actcgcagtg ggcgtattct gcactcggca gaaaccgatg acgatctgaa
    34741 aagccgccat ccttataaag agtggatgga gaaaaacgtc cgccgactgg taccgtttga
    34801 agatctgccc gatgaagaag tgggtagccg cgaactggac gacgacacgc ttgccagcta
    34861 ccagaaacag tttaactaca gcgcggaaga gctggactcc gtaattcgcg tactgggcga
    34921 aaacggtcag gaagcggtcg gttcgatggg cgatgatacc ccattcgccg tgctctccag
    34981 ccagccgcgc attatttacg actacttccg ccagcagttt gcccaggtga ctaacccgcc
    35041 aatcgatccg ctgcgtgaag cgcatgttat gtcgctcgcc accagcattg gtcgtgaaat
    35101 gaacgtcttt tgcgaagcag agggccaggc gcaccgttta agctttaaat cgccgattct
    35161 gctctactcc gatttcaaac agctcacgac aatgaaagag gagcactacc gcgcagatac
    35221 gctggatatc acctttgacg tcaccaaaac cacgctcgaa gcgacggtca aagagctgtg
    35281 cgacaaagcc gaaaaaatgg tacgtagcgg caccgtgctg ctggtgctct ccgaccggaa
    35341 tatcgctaaa gatcgcctgc cggttccggc tccgatggcg gttggtgcga tccagacccg
    35401 tctggtcgat caaagcctgc gttgcgatgc caacatcatc gtcgaaaccg ccagcgcccg
    35461 cgatccgcac catttcgccg tgttgctggg cttcggtgcg acggctattt atccgtacct
    35521 tgcctatgaa acgctgggcc gtctggtaga cacccacgcg attgccaaag attatcgtac
    35581 cgtgatgctc aactaccgta acggcatcaa caaaagcttg tacaaaatca tgtccaaaat
    35641 gggcatctcc accatcgcct cttaccgctg ctcgaaactg tttgaagcgg tcggtctgca
    35701 cgatgatgta gtgggcctgt gcttccaggg agcggtcagc cgcattggtg gggcgagctt
    35761 tgaagacttc cagcaggatc tgctgaacct gtcgaaacgt gcctggctgg cgcgtaagcc
    35821 catcagccag ggcggcctgc tgaaatacgt ccacggcggc gaataccacg cctacaaccc
    35881 ggacgtggtg cgcacgctgc aacaggcggt acaaagcggc gagtacagcg actatcagga
    35941 atacgcgaag ctggttaatg agcgtccggc aaccacgctg cgcgatctgc tggcaattac
    36001 gccgggtgaa aacgcggtca acattgctga tgttgaaccg gcaagcgaac tgtttaaacg
    36061 ctttgatacc gccgcgatgt ctatcggcgc gttaagcccg gaagcccacg aggcgctggc
    36121 ggaagcgatg aatagcatcg gcggtaactc gaactccggt gaaggcggcg aagacccggc
    36181 gcgctatggc actaacaaag tgtcgcgcat caagcaggtg gcttctggtc gcttcggcgt
    36241 tactccggcg tatctggtca atgccgacgt cattcagatt aaagtcgccc agggcgcgaa
    36301 gccgggcgaa ggcggtcagt tgccgggcga caaagtcact ccttacatcg ccaaactgcg
    36361 ctattcggtg cccggagtga cgctgatctc cccgccgccg caccacgata tctactctat
    36421 cgaagactta gcgcagctta ttttcgacct caagcaggtt aacccgaaag cgatgatctc
    36481 cgttaagctg gtgtccgaac caggcgttgg caccatcgcg actggcgtgg cgaaagctta
    36541 tgcggacttg atcaccatcg cgggctatga cggcggcacc ggcgcaagcc cgctgtcgtc
    36601 agtgaaatat gcaggctgcc cgtgggaact cggtctggtg gaaacccaac aggcgctggt
    36661 tgccaacggc ttgcgtcata aaattcgttt gcaggttgat ggcggcctga aaacgggtgt
    36721 cgatatcatc aaagcggcga ttctcggcgc agaaagcttc ggcttcggca ctggcccaat
    36781 ggtggcgctc ggctgtaaat atctgcgtat ttgccacctg aacaactgcg ccacgggtgt
    36841 agcaactcag gatgacaaac tgcgtaagaa tcactatcac ggcctgccgt tcaaggtgac
    36901 taattacttt gagtttatcg cccgtgaaac ccgcgagctg atggcacagc tgggagtaac
    36961 gcgtctggtg gatctgattg gtcgcaccga cctgctgaaa gagctggacg gtttcaccgc
    37021 caaacagcag aaactggcgc tgtcgaagct gctggagact gccgagccac atgcaggtaa
    37081 ggcactctac tgcaccgaaa acaacccgcc gtttgataac ggcctactga acgcgcagtt
    37141 gctgcaacag gcgaaaccgt ttgtcgatga acgccagagc aaaaccttct ggttcgatat
    37201 ccgcaacacc gaccgttctg tcggcgcgtc gctttcaggc tatatcgccc agacgcacgg
    37261 cgatcagggg ctggcagccg atcctatcaa agcgtacttc aacggcaccg caggccagag
    37321 tttcggtgtg tggaacgcgg gcggcgtgga actgtacctg accggggatg ccaacgacta
    37381 tgtcggtaaa ggcatggcgg gcggcttaat cgccattcgt cctccggttg gttccgcctt
    37441 ccgcagccat gaagcaagca ttatcggcaa cacctgcctg tatggcgcga ccggtggtcg
    37501 tctgtatgcc gcaggccgcg cgggtgaacg tttcggcgtg cgtaactccg gtgctatcac
    37561 cgtggtagaa ggcattggcg acaacggttg tgaatatatg acgggtggta tcgtctgcat
    37621 tctgggtaaa actggcgtga acttcggtgc gggcatgacc ggcggcttcg cttacgttct
    37681 cgatgaaagc ggtgatttcc gcaaacgcgt taacccggaa ctggtcgagg tcttaagcgt
    37741 tgacgatctg gcgatccatg aagagcatct gcgcggtctt atcaccgagc atgttcagca
    37801 tactggctct cagcgcggtg aagagattct ggcgaactgg tcaaccttcg ccactaaatt
    37861 tgcgctggtt aaaccgaagt ccagtgatgt aaaagcactg ctgggtcatc gtagtcgtag
    37921 cgcagcagag ttgcgcgtgc aggcgcagta aggggtagca acaatgagtc agaatgttta
    37981 tcaatttatc gacctgcagc gcgttgatcc gccaaagaaa ccgctgaaga tccgcaaaat
    38041 tgagtttgtt gaaatttacg agccgttttc cgaaggccag gccaaagcgc aggctgaccg
    38101 ctgcctgtcg tgcggcaacc catactgcga gtggaaatgc ccggtacaca actacatccc
    38161 gaactggctg aagctcgcca acgaggggcg tatttttgaa gcggcagaac tgtcgcacca
    38221 gactaacacc ctgccggaag tttgcggacg tgtctgcccg caagaccgtc tgtgcgaagg
    38281 ttcctgtacc ctgaacgatg agtttggcgc ggtgaccatc ggcaacattg agcgttatat
    38341 caatgataaa gcgttcgaaa tgggctggcg tccggatatg tccggcgtga agcaaaccgg
    38401 taaaaaagtg gcgattatcg gcgcaggccc ggcaggtctg gcgtgtgcgg atgtcctgac
    38461 gcgtaacggc gtaaaagccg ttgtcttcga ccgtcatcca gaaattggcg ggctgctgac
    38521 cttcggtatt ccggccttca agctggaaaa agaggtaatg acgcgtcgcc gtgaaatctt
    38581 caccggcatg ggtattgaat tcaaactcaa taccgaagtg ggccgcgacg tgcaactgga
    38641 cgatctgctg agtgattacg atgccgtctt ccttggcgtc gggacttatc agtcaatgcg
    38701 cggcgggctg gaaaacgaag acgccgatgg cgtgtacgca gcgctgccgt tccttatcgc
    38761 caacaccaaa cagttaatgg gctttggtga aacccgcgac gaaccgttcg tcagcatgga
    38821 aggcaaacgc gtggtggtcc ttggcggtgg cgacactgcg atggactgcg tgcgtacgtc
    38881 cgtgcgccag ggagcgaagc acgttacctg tgcctatcgt cgtgatgaag agaacatgcc
    38941 gggttcccgc cgcgaagtga aaaacgcgcg ggaagaaggc gtagagttca aattcaacgt
    39001 ccagccactg gggattgaag tgaacggtaa cggcaaagtc agcggcgtaa aaatggtacg
    39061 taccgaaatg ggcgaaccgg atgccaaagg ccgtcgccgc gcggagatcg ttgcaggttc
    39121 cgaacatatc gttccggcag atgcggtgat catggcgttt ggtttccgtc cacacaacat
    39181 ggaatggctg gcaaaacaca gcgtcgagct ggattcacaa ggccgcatca tcgccccgga
    39241 aggcagcgac aacgccttcc agaccagcaa cccgaaaatc tttgctggcg gcgatatcgt
    39301 ccgtggttcc gatctggtgg taaccgctat tgccgaaggt cgtaaggcgg cagacggtat
    39361 tatgaactgg ctggaagttt aagctctgtc ccagcgccgc ctcctcagaa aagagtcggc
    39421 gctgaaattc tcctttcttt ctggaaagcg cctcgcataa tctgaagaaa accaatgtaa
    39481 tacgctcatc tggattgtta ccggtagatg cccggcgtat agctgattcc attattcaac
    39541 gcagcgccat ataaagggac agagaatgga atcgctctca gagagaacct caacaggcta
    39601 ccagcaaatc cacgacggta ttattcacct ggtcgatagc gcccggacgg aaacggtacg
    39661 tagcgttaac gcgctgatga ccgcgacata ctgggaaatt ggccgacgaa ttgtcgaatt
    39721 tgaacaaggt ggcgaggcca gggctgcgta tggtgcgcag ctaatcaagc gactatcaaa
    39781 ggatttaagt ctaaggtata agcgtgggtt ctctgcaaaa aacttacgcc aaatgaggct
    39841 tttttacctc ttttttcaac atgttgaaat tcgccagaca gtgtctggcg aattaacacc
    39901 attgggaatt ccgcagacac catctgcaga attcccatcg gcaaagattt ggcagacgct
    39961 gtctgccaaa tctttccccc agccctggtc cacctacgtc cgtttacttt ccgttaaaaa
    40021 cgctgacgcc cgcagctttt atgaaaaaga gacgctccgc tgtggctggt ctgttcgcca
    40081 gctagaacgg caaattgcga cccaatttta tgagcgaaca ctactgtcac atgacaaatc
    40141 agccatgctg caacaacacg ctcctaccga gacacatatt cttccgcagc aggcgatacg
    40201 cgatcccttt gtgctcgaat ttctggaatt gaaagatgaa tactcagaat ccgattttga
    40261 ggaggcgctg atcaaccacc tgatggattt catgctggaa cttggggatg attttgcctt
    40321 tgttggtcga cagcgaaggt tacgcattga tgacaactgg tttcgtgtcg atctgctgtt
    40381 tttccaccgc cgtttacgct gcctgctaat cgtcgatcta aaagtgggca aattcagcta
    40441 tagcgatgcc ggacaaatga atatgtatct caactacgcc aaagagcact ggacgctacc
    40501 ggatgaaaat ccgcccatcg gtctggttct ctgtgcagag aaaggagccg gagaagcgca
    40561 ttatgcactg gctggtttgc ctaacaccgt tctggcaagt gaatataaga tgcagctacc
    40621 tgatgagaaa cgactcgcgg atgaactcgt tcgaacacag gcggtgctgg aggaaggctt
    40681 tagacgccgt taatttcagc ggtttcgaat tctccagaca ctgtctggag aatctttaaa
    40741 acgaactaag ttttaagcca ttaaatcagc cttaaccttc accacaacct ttttaatctc
    40801 tccaagctct ccaacaacgc atcctggttt atgcggttct ccaggcataa acacggcgaa
    40861 cattcccggt tttaagatga tggcttgctc gttttcaatg gtgctgcaaa gctggtaatc
    40921 atcctcatgg tggaactctt cacactgacg cgcagtgcct gccatgccaa acagaatccg
    40981 ttcctcaccg tttaataaca gctggatatc aatgtattgc tcgtgcagct ccgctttttt
    41041 ctcaacgggc gattgagtgt taaacgtcat gacattcata aaaatattgt cgccctgtaa
    41101 ttcgtaacga cccggcgctt tttcttgcgg tctggcagct aatgccagcg ttaacgcgtc
    41161 ctgtaacgca ggatgtaacc cagcagacgg taatgaccgt acttcaccca tcatcataat
    41221 ttttctccct gggccaacag cgcagcccca agtaaacctg catcatggcg gtaatgcgcc
    41281 gccagtaaat caacatgaaa tgccgctggc tcctgcgcca gatacatttc caccaacgcc
    41341 agataccctt ctgccagacc aacgctgcca ccgaccacca cgcactggca atcagttgtg
    41401 gctttaatat cagcgatcag ccttgcaagc gtacgtgcgg agcgatgaat cagttgctgc
    41461 gcctgctcgt cgccctgccc ggcgcgtgtg aaaatagttc tcgcatccgc gccagccagc
    41521 tcgccctgcg ctgccgccgc aatgccgcga ccagaagcaa ttgcttccac gcaacctgtg
    41581 cgtccacagc cgcagactgg gccgtgtgga tcagcaagcg tatgcccgat gtgccccgcc
    41641 agaccgccag ggccggtaag cagtttgccg ccgctcacta caccgccgcc gacgccagtg
    41701 gaaacggtga taaagaccat atcggttata tcgccttcca gcgcctgata ctctgcccat
    41761 gctgcggcct gcgcgtcgtt aatggcaatg gtcggcaaat tggtaagttg ttccagggtt
    41821 ttgactaacg gaaagtgtag caatccaccg agattatgcg gattcagcgc cagcaaactg
    41881 ccgtcgcgaa taattccggt tgaagcgatg gcaacccgct gcgcatgagc ttgcaacgga
    41941 gagactaatg cggataaggc atcacgcaag gcttctggtg tctggctggc tggcgtagga
    42001 agttcacgac gatcgcggat ctgcccgtca gcgccaatca gcgcggcggc aagtttagta
    42061 ccgccgatat caatcgccag tgtggtcata gcaccgcctt tttcatcgcg gtgttgtacc
    42121 actgacaaat gtgctcaaga cgtgtgatag cagaaccgac cgtcaccgcc cacgcgccgt
    42181 ggcgcattgc gtctgccgcc tgagcaggcg agttataacg cccttcggca atcacccgac
    42241 atccggcgtc gctcaacgtt ttcaccagcg ccagatccgg ctcttctggc gtttcaggcg
    42301 tggtatagcc agaaagcgta gtgccaataa tttcggctcc cagcttttgg catgccaggc
    42361 cgtcttccgg cgtggaacag tcggtcatcg ccagtaaacc gtgatggtga atacgtgcca
    42421 gcaacgtttc aacaggcacc ggacgcgggc ggtcggtgcc gtcaatggcg ataatgtccg
    42481 cgcccgcctg cgccagcgca tcaacatctt caatataggc cgtgatgcgt accggagaat
    42541 cctccagatc gcgtttcaca atcccgataa tcggcacgct caccaccgca cgcgtggctt
    42601 gcagatttgc cacaccttca atacgaatgg caaccgcgcc cgcttgctct gccgctaatg
    42661 ccatggcagc aacgatttcg ggtttatcga gcgggctgtc cggaaccggc tggcaggaga
    42721 caatcaggcc accgttagca gcgatttttt gatccagttg tgcaagtaac gacatacatc
    42781 ttcccttagc gaaaggcccg gtacagagac cgggcaacag gattaacttt tggttttgac
    42841 taaatcgttt ttggcgcggc caaacggcac ggcaccgcta aatggtttgc cgtcgatagc
    42901 gtcatgagta cgcaatgctt ccgggcgcag ccaacgctga acacgagaag gcatatcaag
    42961 accaatcagc aggatcacca caaatgtcag gctgaacgag agcgatgcca gcgcagtacc
    43021 cagatccaga cgttgagcga tcaacgcgcc gatgattggg gccagtgcgc cacccaatgc
    43081 gccaacgttg taggtaaagc ccaggcccgc tgcacgctgg tcggtatcga aataaccgcc
    43141 aatcagtttc ggtaagatcc cggcgatccc ttgtccaagc atttgctgga agaacagtaa
    43201 cagaccgagc acccagacgt ttgcgccgcc aatcgcaaat accggaataa tcagcagctg
    43261 cgaggccagc aggctacaaa cgtacgcttt gcgggttccc agccagtcac cgaggaagcc
    43321 acctacgcag catcccacgg ccgcgccaaa gccactaaag aacagcacat tggcgacagt
    43381 atgcgggtta taagccagat cggttttcag atacgttggc agcagcgcct gaatcggcca
    43441 tgagtagagg aaagcaaaca acacgaccac catcagcatt acgcccgttg gccagcgttt
    43501 gcctgtactc tgcaccataa agctgataaa gattgtggcg cataacagcc caagaacagc
    43561 gacgatcgcg gcattttgca ggttaccggc gaagcagaac cacagcgcag tagccgccgc
    43621 cagtgtcatt acgatattgg caatgcgatg ttcaccacgg tagagaatat ccaccattgt
    43681 gcgtactggt gctttacctg cgtgtttctc tttccagtct tccgcttccg ggatgttttt
    43741 acgcagccag agagcaaaga tgattggcaa aatgccgata aagaacagcg cacgccaacc
    43801 ccagaccgga accaccaggc tatagacctg agcggcaacg acggccccca cagagaagcc
    43861 tgaaatcaaa aaaccactgg ctttgttacg cagatgtttt tgccagcttt caatgacata
    43921 ggtggcgctg gaaccgtatt cacccgccat ccccatgccg atgaccagac gagcgataaa
    43981 catggtgatg tagcctggcg caaagccgca ggccagcgtc ccggccgaga agagaacgat
    44041 gctggtgacc attgccagac gacgcccgta gcggtcaccc atagcgccga gcatcaggcc
    44101 gccgaaccag cgagagataa aggctgcgga gatcagactt gccgcctgca ccgtcgtcag
    44161 cccgaattca ccctgcactt cggtgagtac cagggcgatt aaaacgaaat caaaaccgtc
    44221 aagcagatat cccaaccagg cagcggaaaa tgcgcgccat tgtgcacggt tgagatggcg
    44281 ataccacggg atattctggg ttgtagtact cattgtgagt ctcccgcggt gggcgatgcc
    44341 cacacgcttt ggtataaaaa ttgtagggta cagatgcgtt tatttcccct cacccggtag
    44401 gggcgagcga ggggaaacaa ctcacccgcg ctcttgcatc aactgctggg ccagcgcctt
    44461 cagttctggc agatattttt catctactgg tccaaacggt ttgcggcaca gcggcacaga
    44521 aacgacatcc atataatgca ggacagtttt caggccgcgg aatacgccag ttttgatcag
    44581 taaatcaatg actttgttgc actcagtttg cagtttctgc gcggtctgga tatcgccttc
    44641 tttcagcgcc ttaacgatcc cctgatagcg ccagcccatg atgttgtaag tactgccgat
    44701 accaccatca gcgcctgcca gcaagccgga agcgaagatt tcgtcgtaac cgttatagag
    44761 caccagatca ggatgttcac gacggatctg ctccatctga tagagatcgc cagaggtctg
    44821 tttcagcgca ccgacgccag gcaacgtaac cagggtgttg atctgatcca gggtcagttt
    44881 taccccactc agggctggaa tgttgtacac caccatcggc aacccatccg ctgaatcaat
    44941 aattgcccga tagtgatcgc agtgttcttc aaagctgaaa ggatagtaga acggcgtgac
    45001 ggcggagacg gcatcgaagc cataacgttt agccgatgcc gcaagttgtt ggctttcggc
    45061 ggtgctgacg caaccgacgt gggcgatgag tttaatctta cctttcgcct cttcggcgac
    45121 gatttccagt acctgttcac gctcggaaag gctttgtaca aaggcctcgc cggtcgaacc
    45181 acccacgtat aaaccgtcga tgccctgctg aatattgaac tgaaccaagc gacgcagact
    45241 cgctttatcc agtgcttgtt gttggtcaaa aggagtcagg agtgcagcca ttacgccacg
    45301 taaattcgtt gccataaata cctctgaagt gatgcttgtc tgataaacga tataccttta
    45361 tacctgttat gccagatcaa ttaagcaaca ccccatacag aaagcttata atgcgatctg
    45421 cttcactaaa gtggcattat ttctttttgt tggtggtctg accgaaagcg tgccaggtag
    45481 cagagacgct gttgagatgc gattgcaacg cacgatcggc ttcgtcagga tcatgacggc
    45541 ggatcgcatc aacgatcgca atatgctgtt gataactaac gttgttatgt tcgtgcagtg
    45601 cctgatcggt aaccgttggg cgtgcggcaa taagccagtc gagcagggca acgtggatcg
    45661 ccatgaagat tgggttaccg gggatctccg ccagcacgcg gtggaaatca acgtctgaac
    45721 gaatgaatgc cgcgttgtta tccagcgact gactgttgat ttccagtgct tttgccagca
    45781 aatcgatttg ctcatcggtg gcatgttcag ccgcatagcg caccagactg gattcaaaga
    45841 acagacgtaa ttgttcgaaa tgggcaatcc caccgggatg agaaaggaaa tctttcgcca
    45901 tgccggaaag ctcaccgatg atagtgtccg cagaaggacg cgagacgcga gcgcgttcgc
    45961 cgttgtttat ttgcaccaga cctttgcgtt ttaacgctgc cagcgcttcg cgcacagaag
    46021 gacgcccgac gttaaagaac gccatcagtt cgcgttcaga cggtaattgt tcaccttcgc
    46081 caaattcacg acggcggatc atctgttcca gctcttcttc caccatttcg gagagttttt
    46141 tacgcgccag cgggcggcta cgcaagttgc gaccaattgc aagtgaagaa tcttcggttt
    46201 gcgaatcaaa tgcgttcata aggcccattc tgtaaggtca gtgtgattaa catcatcagt
    46261 gacatcctat cacaggattg aaagtagggg aaaatggcag gtttttctct ttgtgcctcg
    46321 tcattaccat aattaacgga ataattaact attgcgaaaa attaatgtaa cgcagataaa
    46381 cacatcccga ttgaattatt cataagacta ttcacaaaca ttatgaatat tatgaatgtg
    46441 ttcttacaaa ataatcataa gcgtatattt tttaatgaaa aatcacctca cctacaatta
    46501 aaaacacgac atccgcacca taaatagact tgcaaaaaat ataacatcat tgttttcaat
    46561 ctgccgttta tgggattgac cgttttcttt tgacacggag ttcaacaatg ttcagcataa
    46621 ttatatctgt catcgtatta attacgatgg gctatttgat cctgaaaaac tacaaacctc
    46681 aggtggtgct ggctgccgca ggtgtcttcc tgatgatgtg cggtgtctgg ttagggttcg
    46741 gtggtgtact cgatcccgcc aaaagcagcg gctacttgat cgtcgatatt tataatgaaa
    46801 tcctgcgcat gctgtccaac cgcattgccg gattggggct gtcgattatg gcggtgggtg
    46861 gttatgcccg ctacatggag cgcataggag ccagtcgcgc gatggtgagc ttgctaagcc
    46921 gcccgttaaa actcattcgc tcgccgtata ttattctgtc ggcaacttac gtcatcggcc
    46981 aaatcatggc gcagtttatt accagcgcct ccggtctggg tatgttgctg atggtcacct
    47041 tatttccgac gctggtgagt ctgggagtaa gtcgcctctc tgcggtggcg gttatcgcaa
    47101 ccacgatgtc cattgagtgg gggattctgg aaacgaactc catttttgct gcccaggtag
    47161 cgggaatgaa aattgccaca tacttcttcc actaccagct tccggtcgcc tcttgcgtca
    47221 ttatctcggt ggcgatctcc cactttttcg tgcaacgcgc ttttgacaaa aaagataaaa
    47281 atatcaatca cgaacaggca gagcaaaaaa ctctcgataa tgtcccgccg ctctattacg
    47341 ccattttacc tgtgatgccg ttaatcctga tgctcggctc gctgttcctc gcccacgtcg
    47401 ggctgatgaa gtcagaactg catctggtgg tggtgatgtt actaagtttg acggtgacga
    47461 tgtttgttga gttcttccgc aagcataact tgcgcgaaac aatggacgat gtgcaggcgt
    47521 tttttgacgg catgggtacg cagtgtgcca acgtggtaac gctggtggtc gcgggtgaaa
    47581 tatttgcgaa aggcttaacg acgattggca ctgttgatgc ggttatcagg ggtgcggagc
    47641 attctggtct gggcggtatt ggcgtgatga ttattatggc gctagtcatt gccatttgtg
    47701 ccattgtgat gggctctggc aatgcgccgt ttatgtcatt tgccagtctt attccgaata
    47761 tcgcagccgg actacatgta ccagcggttg taatgattat gccgatgcat tttgccacga
    47821 cgctagcgcg cgcggtttcg ccgattactg cggtggtggt cgttacgtca ggaattgcag
    47881 gcgtttcgcc ttttgcggtg gtgaagcgga cagcgatccc catggcagtc ggtttcgtgg
    47941 tgaatatgat tgccacaatc acgctatttt attaagtcat taaaaagaca aaacaggccg
    48001 cctgggcctg ttttgtatta cttcacaacg cgtaatgccg gtcgaccacc gcgtggtggc
    48061 tgcggaggtt catcgtcagg atgagtgtca tcatcgtgat ctggcttgtc gccatcaata
    48121 accgacataa cggtttcgtt gtctgccgat gcctcttcat cattcatgat gctggtatct
    48181 tcatcgtagg cagcttcagg ctcaaacatc gtgcctgcgc cattttcacg ggcgtagata
    48241 gccagcacgg cagccagcgg cacagaaacc tgacgcggaa tgccaccaaa gcgcgcgtta
    48301 aagcgcacct catcattcgc cagttccaga ttgccgacag cacgcggcgc aatgttgagt
    48361 acgatttgcc cgtcacgcgc atattccata ggaacctgca cgccagggag cgtcacatcc
    48421 accaccaggt gcggcgtgag ctggttatcc agcaaccact catagaatgc acgcagcaga
    48481 tagggacgac gtggtgttag ctgtgacaaa tccatacaga ttaactccgg cccagacgca
    48541 tttcacgttc tgcttcagtt aaagaagcaa ggaaagagtc acgctcaaag acgcgggtca
    48601 tatagccttt cagctctttc gtacccgggc cgctgaactc gatgcccagt tgcggcagac
    48661 gccacagcag cggagcaagg tagcaatcga ccaggctgaa ctcatcgctc aggaagtacg
    48721 gcttctgacc gaagaccggc gcaatcgcca gcagttcttc gcgcagttgc ttacgtgcgg
    48781 catctgcttc agaagctgaa ccgttgatga tagtgttcat cagcgtgtac cagtcttttt
    48841 cgatgcgatg catgtacaga cggctttcac cgcgagctac cgggtaaaca ggcatcagtg
    48901 gcggatgcgg gaaacgctca tccagatatt ccataatgat gcgagattcc cacagggtca
    48961 gctcacgatc caccagggtc ggaacgctct gattcgggtt gaggtcaatc agatcctgag
    49021 gcggattgtc cttttccacg tgttcgatct cgaaacttac acctttctca gccagcacaa
    49081 tgcggacctg atggctatag atgtcagtag gaccggaaaa cagcgtcatt accgaacgtt
    49141 tgttggcagc gacagccatg aaaacctcca ggtatagtca gaatttttac tgctaccagc
    49201 caccaggtgg ccagtcagaa gttgtgttac ccagtaagga acgactctct ttgttcgaaa
    49261 atcaaacaaa aaatgagcaa tacccgacat ttgggcagaa aattggatga tagtttacca
    49321 gattttgcga cctttgtggt gagtcgatgc cggaaatggg gaaaaagaga tgcgctttag
    49381 tctgaaatag ttgacttagt cccttattgg cgatgtggtt tttgttttac ctgtctgtca
    49441 ggtggcagca aaaagcaact ttccattttt tacgctgatt cagaatttag ccataaaaaa
    49501 acccgccgaa gcgggttttt tcgcaaattg ttttctgccg gagcagaagc caattaacgt
    49561 ttggagaact gcggacgacg acgtgcttta cgcagaccga ctttcttacg ttcaacctga
    49621 cgagcgtcac gagtaacgaa gccagcttta cgcagttcag aacgcaggga ctcgtcgtat
    49681 tccatcagag cgcgggtgat accgtgacgg atcgcaccag cctgaccaga gataccacca
    49741 cctttaacgg tgatgtacag gtccagtttc tcaaccatgt cgaccagttc cagcggctga
    49801 cgaactacca tgcgggcagt ttcacgaccg aagtactgtt ccagagaacg ttggttgatt
    49861 acgattttac cgttgcccgg tttgatgaaa acgcgagctg cggaactttt gcggcgacca
    49921 gtgccgtagt attgattttc agccattgcc tataatcccg attagatgtc aagaacttgc
    49981 ggttgctgtg ccgcgtggtt gtgctcgtta cccgcgtaaa ctttcagttt acggaacata
    50041 gcacgaccca gcgggccttt tggcaacatg cctttaaccg cgatttcaat cacacgctca
    50101 ggacggcgag caatcatctc ttcaaaggtc gcttgtttga taccaccgat gtggccggtg
    50161 tggtgatagt acactttgtc agtacgcttg ttgccggtta cagcaacttt gtcagcgttc
    50221 agaacgatga tgtaatcacc ggtatctacg tgcggagtgt attccgcttt gtgcttaccg
    50281 cgcaggcgac gagccagttc agtagccaga cggcccagag ttttaccggt cgcgtcaaca
    50341 acataccagt cgcgttttac ggtttctggt ttagctgtaa aagttttcat taaaagctta
    50401 cccaataaat agttacacgt tggtgaacac ccaaacgtct tcaattgttg aggttcacac
    50461 gacaaagtcc ggcaaaccta ccccttcgaa tagcctatgc cagcacacaa aaagttttgg
    50521 gaaaaaaact ttcttgtaac gtggggtcgc aggattatag agaagtcggg gtcaaagatc
    50581 gacccctttt tgtgatttgt ggcaggtttt aacccgctaa atgctcgcgc ttcagatact
    50641 cttcgctttg catctcttgc agacgtgaca ggcaacgctg gaactcaaat ttcagccgct
    50701 cgccctgata aatttcatac agcggcactt ctgcactcac cactaatttg acatggcgct
    50761 cgtaaaactc atccaccagc gcaataaagc gccgcgcttc gctctccatc aaccgcgtca
    50821 taactggtac atcaaacaac atgaccgtat gaaagagacg tgagagcgca atatagtcat
    50881 gctgactgcg ggcgtcgacg cacagcgtag taaaagagac cgccagcgtc tggttctcga
    50941 cgcccattgt cgctaatggc cgatggttga tttctaacgt cggtgaattt tctcgtttcc
    51001 cccccgccag cgccaaccat agtttatcca tttgcgcccg ggtttcatcg tggagtggcg
    51061 aaagccacag atgcgcctga gtgagtgtac gcagtcgata atcaacacca gcgtccacgt
    51121 tcattacatc acaatgctgt ttaatggcat cgattgcagg cagaaaacgc gcacgttgca
    51181 ggccatttcg ataaagttcg tccggcggaa tatttgacgt cgctaccagg gtaataccgc
    51241 gggcgaacag ggctttcatc agaccgccaa gtagcatggc gtcggtaata tcagaaacaa
    51301 aaaattcgtc aaaacagagc acgtcagttt cggctttaaa gcgatcggca ataatttcca
    51361 gcggatcggt ctgcccctgt aaggcagtta gctcttcgtg cacccgcagc ataaaacggt
    51421 gaaagtgcag gcgctgtttc cgctctcccg gcaggctttg atagaaaagg tccatcagcc
    51481 aggttttccc gcgtcctaca ccgccccaca tatataagcc acgcactggc gtatgctttg
    51541 tgtcttcgcg tttaccccac agcttaccga cccgtgccat tagcccactc gtcctggggg
    51601 ctggtggcgt gctattgatg agttcctgat aaataatttc caggcggctg acggcctctt
    51661 tttgaacgtc gtcgggttga tggctgcctt cattgagcgc cttcaggtat tgcgatgttg
    51721 gggtaacgct ttgcatgatc ttattgttat tccttgaata atcggtgcgc cgttgttcac
    51781 ggttgacgaa aaaaaggccg ttctacacta cgcgatatgc agtcgggatt ccacttctgt
    51841 ggcattaacg gttatagtgg cataatcagc cgcaggcatg gagcctgaag ccaacaccct
    51901 acggaaacaa aagacaacgg gagatgttca tgacctggga atatgcgcta attgggttag
    51961 tcgtcggcat cattattggt gctgtggcca tgcgttttgg taatcgtaaa ctacgccagc
    52021 aacaggcgtt gcagtacgaa ctggaaaaga ataaagctga actggacgag tatcgcgaag
    52081 agctggttag ccactttgcc cgcagcgcgg aattactgga taccatggcg cacgactatc
    52141 gccagctgta tcagcacatg gcaaaaagct ccagcagcct gctgccggaa ctgtctgctg
    52201 aagcaaaccc gttccgtaat cgtctggcag aatctgaagc cagcaacgat caggcaccgg
    52261 tgcagatgcc tcgcgactat tctgaaggcg catctggcct gctgcgtaca ggcgcgaagc
    52321 gcgactaatt tatttttcgg gcgcagccat tgcgccctcc tcttctctcc ctccccgact
    52381 atcatttaat ctggtgtctc attgttagcc gtctgaaaat tcaataacat caaactgttt
    52441 tgaatctctt ttcttatcat tcaggtacga gagcaggaat aatgaaaaaa caaacccagc
    52501 tgttgagtgc attagcgtta agtgtcgggt taactctctc ggcgtcattt caggccgccg
    52561 cgtcgattcc aggccaggtt gccgatcagg cccccctccc cagtctggct ccaatgctgg
    52621 aaaaagtgct tccggcagtg gtgagcgtac gggtggaagg aacggccagt cagggacaga
    52681 aaatcccgga agaattcaaa aagttttttg gtgatgattt accggatcaa cctgcacaac
    52741 ccttcgaagg tttaggctcc ggtgtcatca tcaacgccag taaaggctat gtgctgacca
    52801 acaaccatgt gattaatcag gcacagaaaa tcagtattca gctcaatgat gggcgcgagt
    52861 ttgatgcaaa actgattggt agcgatgacc agagcgatat cgccctgttg caaattcaaa
    52921 acccgagcaa attaacgcaa atcgctattg ccgactccga taaattgcgc gtcggtgatt
    52981 ttgctgtggc ggtcggtaac ccatttggcc ttgggcaaac cgccacctct ggcattgttt
    53041 ccgcattagg acgcagcggg ttgaatcttg aaggtctgga aaactttatc cagacagatg
    53101 cttccattaa ccgcggtaac tccggcggtg cactgttaaa ccttaacggt gagttaattg
    53161 gcatcaacac tgcaatcctt gcgcctggcg gcgggagcgt cgggattgga tttgccatcc
    53221 ccagtaatat ggcgcgaaca ctggcgcagc agcttatcga ctttggtgaa atcaaacgcg
    53281 gtttgttagg catcaaaggc accgagatga gtgccgatat cgccaaagcc ttcaaccttg
    53341 acgtgcagcg tggcgcgttt gtcagcgaag tgttgccagg ttctggctca gcgaaagcgg
    53401 gcgtcaaagc gggcgatatt attaccagcc tcaacggcaa accgctgaat agctttgctg
    53461 agttgcgctc tcgtatcacg attacagagc cgggcacgaa agtgaagctt ggcctgctgc
    53521 gtaacggcaa accactggaa gtagaagtga cgcttgatac cagcacctct tcgtcggcca
    53581 gcgctgaaat gatcacgcca gcgctggaag gtgcaacgtt gagcgatggt cagctaaaag
    53641 atggcggcaa aggtattaag atagatgaag ttgtcaaagg aagcccagct gctcaggctg
    53701 gcttgcaaaa agacgatgtg atcattggcg tcaaccgcga tcgggtgagc tcgattgctg
    53761 aaatgcgtaa agtgctggcg gcaaaaccgg ccatcattgc cctgcaaatt gtacgcggca
    53821 atgaaagcat ctatctgctg atgcgttaat gtcgtaaacc gggcatcagg ctgacgtgtg
    53881 atgtccggtt aactcgtggt atgctgctgc cgttcccttt tttaatgacg cctccatcat
    53941 gtttgtgaag ctcttacgtt ccgttgcgat tggattaatt gtcggcgcta ttctgctggt
    54001 tgccatgcct tcgctgcgca gccttaaccc gctttccact ccgcaatttg acagtaccga
    54061 tgagacgcct gccagctata atctggcggt tcgccgcgcc gcgccagcgg tggttaacgt
    54121 ttacaaccgt ggtttgaaca ccaactctca caaccagctt gagatccgca ccctgggatc
    54181 cggtgtaatc atggatcaac gcggttatat catcaccaat aaacacgtca tcaacgacgc
    54241 cgatcagatc atcgtcgcct tacaggatgg acgtgtattt gaagcattgc tggtgggatc
    54301 tgactctcta accgatctgg cggtacttaa aattaatgcc actggcggtt tacctaccat
    54361 tccaattaat gcacgtcgcg taccgcacat tggcgacgta gtactggcga tcggtaaccc
    54421 gtacaacctc gggcagacca ttacccaagg gattattagt gccacgggtc gaatcggtct
    54481 gaaccctacc gggcggcaaa acttcctaca aaccgatgct tccattaacc acggtaactc
    54541 tggcggcgcg ctggtgaact cgctgggaga actgatgggc attaacacgc tgtcgtttga
    54601 taagagtaac gatggcgaaa cgccggaagg tatcggcttt gcgattcctt tccagttagc
    54661 aaccaaaatt atggataagc tgatccgcga tgggcgcgtg atccgcggct acattggcat
    54721 tggtggacgt gagatcgcac cactgcacgc gcagagcggt ggtatagatc aactgcaagg
    54781 gatcgtggtt aatgaagtgt cacctgacgg cccagcggcg aatgcgggta ttcaggtcaa
    54841 cgatttgatt atttcggtgg ataacaaacc ggccatctct gctctggaga cgatggatca
    54901 ggtggcggaa attcgccctg gttcggtgat ccctgtagta gtgatgcgtg atgataagca
    54961 gttaacgctg caggtcacca ttcaggaata tccggcaacc aattaagtcg agtgctcaaa
    55021 acaaaaaacc ggagtctgtg
//
LOCUS       DAJVTL010000009        53077 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.009, whole genome shotgun sequence.
ACCESSION   DAJVTL010000009 DAJVTL010000000
VERSION     DAJVTL010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 53077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 53077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..53077
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.009"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            58..1017
                     /locus_tag="OQQ26_000523"
     CDS             58..1017
                     /locus_tag="OQQ26_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid segregation protein ParM"
                     /protein_id="HCS1856110.1"
                     /translation="MKICIDDGSTNIKLAWTENGERRNAISPNSFKSEWSAPFGGTQP
                     ANYMLDGVRYGFDPVSDRFVQTTDTQYQYSDVNVIAIHHALVKSGITPQEVDVVVTLP
                     LSEYFDTNAQPDMANINRKKANVMRPVEYQNGEAFTIRNVRVMPESIPTGFKTLADMS
                     PFESLLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSH
                     HIANTIIEHRHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAGFSGYGRVM
                     VVGGGAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE"
     gene            1022..1333
                     /locus_tag="OQQ26_000524"
     CDS             1022..1333
                     /locus_tag="OQQ26_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012907691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid partitioning/stability family protein"
                     /protein_id="HCS1856111.1"
                     /translation="MTTPTRRISFYLKPAAVKNEGEACAWLDSLTPEARKSGQRVAFL
                     AGLALLKINPAEAYRLAAWADDEALSVTQTRTERPASQPVSTAQITSQMAGNIRALFP
                     E"
     gene            1397..1729
                     /locus_tag="OQQ26_000525"
     CDS             1397..1729
                     /locus_tag="OQQ26_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001163779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate--amine ligase"
                     /protein_id="HCS1856112.1"
                     /translation="MQHIDREKAQRLIERMEALAKEENVNIQKIAECGQIVLRREKDL
                     KQLMSGKTSKTWASGEETIYCSFCNKSQYEVTKVIAGPSVYICNECVDLCNEIIRREV
                     ADKKGKNT"
     gene            1726..2040
                     /locus_tag="OQQ26_000526"
     CDS             1726..2040
                     /locus_tag="OQQ26_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001080491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856113.1"
                     /translation="MNRKQKQELKYFLRKEIARLEDAESRSSEIPFGMDINDARMLQA
                     YRIAQAALQAKPSDGLVRAVRFYELVKRENPPTETGAWKDAVDWVLREACQTVNIGIK
                     GE"
     gene            2043..2534
                     /locus_tag="OQQ26_000527"
     CDS             2043..2534
                     /locus_tag="OQQ26_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001167297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856114.1"
                     /translation="MQISPVTLRVAKAFISRHHRHNKPPVGHKFSIGLRNDAGELIGV
                     ATAGRPVARHLDDGLTLEVNRTCTTGERNANSALYGAVWRAAKAMGYQRCITYTRADE
                     SGASLRAAGFVRVKELPPRKSWAESSVALRSKRDPVGNGGVPRVLWEIRRMSTTGIRI
                     KGE"
     gene            2536..2799
                     /locus_tag="OQQ26_000528"
     CDS             2536..2799
                     /locus_tag="OQQ26_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856115.1"
                     /translation="MATLTKKERAWLNELQDVLDRCPSPKKIGFYTIGDKSIYLYDLR
                     HMDEIMEALDNRSSMDWCVAVHDMNAGFDEKILFPSSVESTAG"
     gene            2810..3070
                     /locus_tag="OQQ26_000529"
     CDS             2810..3070
                     /locus_tag="OQQ26_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856116.1"
                     /translation="MTTFTDKELIKEIKERIGSLDVRDNIERRAYEIALVSLEAEPVA
                     WMHVNNGIGIPAITRSKEVAESWLSKGWYVQPLHLAQPASKL"
     gene            complement(3561..4604)
                     /locus_tag="OQQ26_000530"
     CDS             complement(3561..4604)
                     /locus_tag="OQQ26_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001706445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCS1856117.1"
                     /translation="MSRKNKKVRMSSRIDLADALRKESSLSAFTFDGPYRLTGHDLLD
                     NMYCADNGRWYETPVDWYGLARAARQTSWHQSALYFKRNVLLGCYIPHPLLSRQDFSA
                     LALDWFVFGNAFLELRSNMLGEPLKLRHALAKYMRRGSDLESWWYVQDGKDAFQFRPG
                     KVCHLMNPDINQEIYGMPEYLGALLSASLSHSADMFRKLYYDNGSHAGCIIYIGAAQV
                     NRESMDSLKETLQGARGGAFKNVLIHAPNGGKEGVQILPFQQNTAKDEFMNVKAASRD
                     DVLAAHRVPPQLMGAMPGEKSAFGDVEKAARVYAINELMPVMEAMKHINDWLGEEVIR
                     FNPYALLDTQPTS"
     gene            complement(4604..6355)
                     /locus_tag="OQQ26_000531"
     CDS             complement(4604..6355)
                     /locus_tag="OQQ26_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HCS1856118.1"
                     /translation="MIQDAFVRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQW
                     DETPPVQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKG
                     RAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGAT
                     WYFAQEALLTALRDNVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKI
                     ILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFS
                     TPSTETHEAYAYWNDDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVV
                     NHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCSVDGYDDWKDWKP
                     FAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPAVPGGRFRTVETRRVQGLEFEEQ
                     ARVIEEFTYRYNVEHIGIDVTGGNGEAVYQIVKRFFPAAIPYTFTLSSKRSLVLKMLQ
                     IMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITYETDRARGISHGDLAWATMLAVIN
                     EPIGGEGENERFTVMEF"
     gene            6510..7346
                     /locus_tag="OQQ26_000532"
     CDS             6510..7346
                     /locus_tag="OQQ26_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HCS1856119.1"
                     /translation="MANEKKTSRKKFRVAVSGVTADGREINGDMLKAAATSYNPSVYG
                     ARVNIEHILSPLPGSEFSAMGDVVGLSTEDITDGPLAGRTALYAEIEPTARMMSLLND
                     GKKIYSSIELEPQSTITGGPYLRGLAMTDPPASLGTERLAFAAQQRMQLMTFNCQQGD
                     VAMFTAAMESELIELTEQRQEEGTQWFNRVMGIIGRGRKADDASFSRIQEAVEGVATS
                     QADIIDRFNVLETRHQQDSQKITLLTTELAALKEKLRTQDGDPQNRFTATGAASDQLA
                     DF"
     gene            7370..8422
                     /locus_tag="OQQ26_000533"
     CDS             7370..8422
                     /locus_tag="OQQ26_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020218748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HCS1856120.1"
                     /translation="MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPSVQQR
                     FENASKESTEFTKRINVIGVTDQKGEKILLDTTGPIARTNTSYDGTKRRNPNNVVDLK
                     NRKYQCEQVNYDTFISYPQLDAWAAHPDFQSRISAQIARQVALDRIMIGFNGTSHADE
                     SNFSTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHAGKYANADALVQD
                     ARSSLLDEWHKEADDLVVIMGRNLFNSLRLSVLNSISGQNPNAELLAGQLILSSRTIG
                     GLGVFLAPFFPDSTMLITSFNNLSIYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVE
                     DYGKYAMVTGLKFADS"
     gene            8468..9268
                     /locus_tag="OQQ26_000534"
     CDS             8468..9268
                     /locus_tag="OQQ26_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000632360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HCS1856121.1"
                     /translation="MITPAQQHWQNVMAQRAGRANEGVDHAARTAHEEVLYRLRLAQA
                     RLKGVQARSAKAAIKKELLPDFSGWIEGTLEADGGQQDEVIAMLMVWAIDCGDLPLAL
                     RIGAYVVRHNLIMPDNFGRTAATVLTEEICNPVLTQAGTDADADLSAFIEPLDTLREI
                     VTDQDMPDEVRAKLCKACAFARRGLSDADSMALSLKLLREAMHLNPNAGVKREIATLS
                     RALKKADSAAAPEDASTPQTQDESSKSKKTTRKPATRKTTATQKAKRG"
     gene            9370..9864
                     /locus_tag="OQQ26_000535"
     CDS             9370..9864
                     /locus_tag="OQQ26_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HCS1856122.1"
                     /translation="MSMVARTNPGPAENDITDTDDGDTRISAGAFWPDIVLRELRLAI
                     RLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWH
                     WRNAVYTATRALILERYRDADTTDKGDRRADALDIQPSDLWRDVSWAISDILCRPRIF
                     AELC"
     gene            9864..10064
                     /locus_tag="OQQ26_000536"
     CDS             9864..10064
                     /locus_tag="OQQ26_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HCS1856123.1"
                     /translation="MKVKALEGDTVDSLCFRYYGTTQGVTEKVLDANPGLCQQVFLDA
                     GQEVEMPEPEKKKREMIQLWGE"
     gene            10067..10390
                     /locus_tag="OQQ26_000537"
     CDS             10067..10390
                     /locus_tag="OQQ26_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCS1856124.1"
                     /translation="MSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTL
                     VQTVTGSLACGVLAMAVAGSLRFFGFPEDAVTFIGASIGFMGAEKAHDKVIAAFNRRV
                     KEKDE"
     gene            10387..10779
                     /locus_tag="OQQ26_000538"
     CDS             10387..10779
                     /locus_tag="OQQ26_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HCS1856125.1"
                     /translation="MSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLR
                     SRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQVSWEWPLYEKIAAAFRQASREL
                     NIPVEWGGDWKTLKDGPHFQLPHGAYPA"
     gene            10776..11183
                     /locus_tag="OQQ26_000539"
     CDS             10776..11183
                     /locus_tag="OQQ26_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HCS1856126.1"
                     /translation="MKLWPTLGVAFLLIAAWGTSMRLSWSLGRENARNEAQASALKST
                     VDTLNIISTGVQDMQQVLAQLRVENQQRNQDGEARREQLRNDIAKDECAHALPDARFT
                     DRLRRHAERATASAVSPAYTADADHTGNASPLP"
     gene            11321..11788
                     /locus_tag="OQQ26_000540"
     CDS             11321..11788
                     /locus_tag="OQQ26_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1856127.1"
                     /translation="MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFV
                     YRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADL
                     LFTLPLRERVRITRSNQGTPQAEHLPEPKPRLPSSEGDWSHVFQDVTWGESDG"
     gene            11781..12416
                     /locus_tag="OQQ26_000541"
     CDS             11781..12416
                     /locus_tag="OQQ26_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCS1856128.1"
                     /translation="MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIR
                     SQKAPDGTAWTPRRRRVTRIQERIRFIWNNESRTLKNWHHDTGKYGRTITGWDEDKNN
                     IRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTTRYLKARADASGVTVGYSGVAA
                     RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERLIYNTVLGRIAEAVR"
     gene            12428..12994
                     /locus_tag="OQQ26_000542"
     CDS             12428..12994
                     /locus_tag="OQQ26_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HCS1856129.1"
                     /translation="MRLLSNIIRTGIISEVDEESWRVRVRSGELETGWLRWNTTRAGA
                     FNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDANPAPGKSLKEIVVSAPDGAVFRY
                     DADAGALSASGMKTATLQASVSVTLDTPVVECTDLLRTATLDVTKGGKMSGNITHSGG
                     DFTSNGITVHTHKHGGVKGGSDSTGGPQ"
     gene            13012..13341
                     /locus_tag="OQQ26_000543"
     CDS             13012..13341
                     /locus_tag="OQQ26_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001705832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HCS1856130.1"
                     /translation="MNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYGSLVPDLI
                     DEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVMQTMQNVE
                     LTITLRE"
     gene            13345..14164
                     /locus_tag="OQQ26_000544"
                     /pseudo
     CDS             13345..14164
                     /locus_tag="OQQ26_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297572.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
     gene            14157..14687
                     /locus_tag="OQQ26_000545"
     CDS             14157..14687
                     /locus_tag="OQQ26_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HCS1856131.1"
                     /translation="MSNSLLPPSASSFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHL
                     LPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEW
                     WEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
                     AAATYDGEVITIYPDD"
     gene            14690..16838
                     /locus_tag="OQQ26_000546"
                     /pseudo
     CDS             14690..16838
                     /locus_tag="OQQ26_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108494.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
     gene            16835..17737
                     /locus_tag="OQQ26_000547"
     CDS             16835..17737
                     /locus_tag="OQQ26_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000631340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macro domain-containing protein"
                     /protein_id="HCS1856132.1"
                     /translation="MITLILSAPVTEMAEAFKRIFANADSVNIVGKPFETIRQFDCMV
                     SAANSFGLMDGGVDAAITAFFGTQLQSRVQNHILREYLGEQPVGSAFVIETGHNHHPW
                     LVHAPTMRVPLTIDGTDAVYNATWAALLAIFQHNKNATTDMKIKTVVFPAMGAGCGQV
                     PFESVARQMKQAWDNFNKKTESINWEYAQSRQSAVFGTYAYCPGNSVCRYADTKYIGC
                     GDYRTCCSRSGQVCINPEHQADDVLIQHQANNRFRPGSHIHRINPENPVGNVTSGAHS
                     HGSSIVIGTPTHTLNKQYSVSDIK"
     gene            17769..18323
                     /locus_tag="OQQ26_000548"
                     /pseudo
     CDS             17769..18323
                     /locus_tag="OQQ26_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001116083.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
     gene            complement(18367..18939)
                     /locus_tag="OQQ26_000549"
     CDS             complement(18367..18939)
                     /locus_tag="OQQ26_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine acetyltransferase"
                     /protein_id="HCS1856133.1"
                     /translation="MLSYLMAIHFVLFGNSTNLKNFWKHEVIRRKRMDIWRLLREKKQ
                     RNRNFLFWWRLANEMYINGNKLHKKAAKKLNSKIINKFGCEIGLGANIGKGLTIPHHA
                     GIVVHFAVDAGENLVLRQNTTIGQIDGDMPGSRVKIGSNVDIGANCCIIGLSRKIGDN
                     VKIGAMSFINKDIPSNCTYITKKSGVVLYK"
     gene            complement(19096..19584)
                     /locus_tag="OQQ26_000550"
     CDS             complement(19096..19584)
                     /locus_tag="OQQ26_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310666.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1856134.1"
                     /translation="MMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIG
                     AGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTGTNTTR
                     SEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKG
                     LL"
     gene            complement(19597..22404)
                     /locus_tag="OQQ26_000551"
     CDS             complement(19597..22404)
                     /locus_tag="OQQ26_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1856135.1"
                     /translation="MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNL
                     ERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLER
                     LNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVT
                     RARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRID
                     KNSPQFKALREQALKLGSETQFTASDAASGQSFLAMAGFTPQTIQAALPGVLNMALAG
                     GVELGETDDIGSNILTQFNLTADQMDRVGDTLTAAFTRTNTDLRALGETMKYTGPVAA
                     KLGISLEEAAAMAGMLANNGLRGSDAGTAMRASLSRLASPPKAAADALKELGVSVADA
                     RGKMRPMEDVLLDLYKATQKYGQVDQVSFFKDIAGEEAFVGLQTLVAAAGSGELQKLT
                     RELQGARGEADRVAKVMADNLDGDLKNLDSAWEGLRIRISDLVDGPLRSVTQWFTRVL
                     EKITSLAQAHPVLTRQLLIAGGALLAMTATIGSLSLVIGALYGKLATLRLGFDILTRS
                     MNVVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFA
                     GVFSGIMERLTPLRETFERFGPVFEAIGSGISQVFNWFKSLLSPMESSKETLDKCTSA
                     GEIFGNVLGGALQLVLTLAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQD
                     KVALLQGDLAKINPPKPVENGNGTGGDKPKDNKPLTDSNTGTLRRLSKIADNTGKLVD
                     ETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPAPAINITPVVPAPLPPALVPV
                     IAASSRPVAEAIRSPVASVPATSRNREPVASGFGGEIHVHLHNVVTQNPRELAKLVGE
                     MVRAEMERRARAWRGSFYDKD"
     gene            complement(22391..22546)
                     /locus_tag="OQQ26_000552"
     CDS             complement(22391..22546)
                     /locus_tag="OQQ26_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000333494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HCS1856136.1"
                     /translation="MCFEHIEDLVADIAAIFNWSPAEIFMMTPGEVVSWRERAALRSG
                     NADNEDS"
     gene            complement(22555..22929)
                     /locus_tag="OQQ26_000553"
     CDS             complement(22555..22929)
                     /locus_tag="OQQ26_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000651574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1856137.1"
                     /translation="MKDIDTETRNNTVADDVTAGEDMAVERGVKLTRPIERGGEKITY
                     VEITGAIEQGGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLC
                     AVAVNFMSEPDSGAKSVQETAA"
     gene            complement(22985..23496)
                     /locus_tag="OQQ26_000554"
                     /pseudo
     CDS             complement(22985..23496)
                     /locus_tag="OQQ26_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310671.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
     gene            complement(23496..24680)
                     /locus_tag="OQQ26_000555"
     CDS             complement(23496..24680)
                     /locus_tag="OQQ26_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HCS1856138.1"
                     /translation="MSETRFHGARVTENTDLVTAINDVDSSIIGIVATADDADAKLFP
                     LNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLV
                     IGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVY
                     ASCHGCNTMAEAIIYRQKFNEREVMLLWPDFIAYNPKSGKNETFPAPAYACGLRAYID
                     HEQGWHKSLSNVPVKNVLGMSKHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNR
                     TPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAG
                     KLIGAECWYDVVDNGTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEFFGPAFAVLG
                     GA"
     gene            24838..25947
                     /locus_tag="OQQ26_000556"
                     /pseudo
     CDS             24838..25947
                     /locus_tag="OQQ26_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494339.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
     gene            25990..26250
                     /locus_tag="OQQ26_000557"
     CDS             25990..26250
                     /locus_tag="OQQ26_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HCS1856139.1"
                     /translation="MFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTL
                     EAFHKFTSKHASGVHSSEGIPWHELPASHRGNNQMSLPLPQN"
     gene            26442..26582
                     /locus_tag="OQQ26_000558"
     CDS             26442..26582
                     /locus_tag="OQQ26_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HCS1856140.1"
                     /translation="MSQKSLTAITFCVTVILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
     gene            26844..27176
                     /locus_tag="OQQ26_000559"
     CDS             26844..27176
                     /locus_tag="OQQ26_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HCS1856141.1"
                     /translation="MALIKCPECQKEVSDSALYCPACGKQLQKLKRSFFGRIIKWVFI
                     LFNIFMTYTLLVGLGGTSEIINNATSDAEKAGAVIGTGLGLITIGSLWVIGDIIIGIL
                     VFLTKPKG"
     gene            27181..28074
                     /locus_tag="OQQ26_000560"
     CDS             27181..28074
                     /locus_tag="OQQ26_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000789402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion protein"
                     /protein_id="HCS1856142.1"
                     /translation="MKNIIFSIGASFISISVLPVHAATEHKNFNAVLQCRAIENNKDR
                     LSCYDKSIQPTRTKVAEKFESRDQCPDEKDDDRRLSCYDRFFSPTFTPSVNSKSKTEK
                     PVTTEAQQPNFSEISKCRAENDKEARLNCYDKLFPQDKAVQAESKLEKATDVGKWHTS
                     ITTSPIDDSKNVILSLESDDYIRTPFGEAVTPTLFIACREKKTEVFLSWDVYLGLEQT
                     SMLYRLDKQKAVERNWLVSTDTKAVFYKGNDIDFIRKLANSSKMYTKITPYNESPVSA
                     TFNLNGLSNALKPLQAACNWK"
     gene            28342..29337
                     /gene="flk"
                     /locus_tag="OQQ26_000561"
     CDS             28342..29337
                     /gene="flk"
                     /locus_tag="OQQ26_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HCS1856143.1"
                     /translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
                     TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
                     LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
                     DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
                     QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
                     NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR"
     gene            complement(29334..30505)
                     /locus_tag="OQQ26_000562"
                     /pseudo
     CDS             complement(29334..30505)
                     /locus_tag="OQQ26_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311233.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(30780..32000)
                     /gene="fabB"
                     /locus_tag="OQQ26_000563"
     CDS             complement(30780..32000)
                     /gene="fabB"
                     /locus_tag="OQQ26_000563"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HCS1856144.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
                     RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI
                     AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
                     GGTNATLVMRKLKD"
     gene            32159..34165
                     /gene="mnmC"
                     /locus_tag="OQQ26_000564"
     CDS             32159..34165
                     /gene="mnmC"
                     /locus_tag="OQQ26_000564"
                     /EC_number="1.5.-.-"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HCS1856145.1"
                     /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK
                     FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL
                     TSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR
                     GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSTPWFNRTGSSKREVAIIGGGIAS
                     ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR
                     RFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPEELAVAVEANAVEQITGVT
                     TNCSGITYPQGGWLCPAELTRNMLELAQQQGLQIRYQYQLQDLSRKDDCWLLNFAGDQ
                     QATHSVVVLANGHQISRFSQTSSLPVYSVAGQVSHIPTTPELAKLKQVLCYDGYLTPQ
                     NPANEHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV
                     RCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAP
                     LCAEILAAQMSEEPIPMDTSTLAALNPNRLWVRKLLKGKAVKAG"
     gene            complement(34221..34499)
                     /locus_tag="OQQ26_000565"
     CDS             complement(34221..34499)
                     /locus_tag="OQQ26_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HCS1856146.1"
                     /translation="MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELES
                     GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ"
     gene            complement(34533..35081)
                     /gene="epmC"
                     /locus_tag="OQQ26_000566"
     CDS             complement(34533..35081)
                     /gene="epmC"
                     /locus_tag="OQQ26_000566"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HCS1856147.1"
                     /translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPTDAEVPY
                     NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
                     ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA
                     LQNYYHTPELTAEQFPWPEALN"
     gene            complement(35081..35890)
                     /locus_tag="OQQ26_000567"
     CDS             complement(35081..35890)
                     /locus_tag="OQQ26_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HCS1856148.1"
                     /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQ
                     YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
     gene            complement(35890..36708)
                     /gene="mepA"
                     /locus_tag="OQQ26_000568"
     CDS             complement(35890..36708)
                     /gene="mepA"
                     /locus_tag="OQQ26_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HCS1856149.1"
                     /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
                     IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGTVLIGDMGMPAGG
                     RFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFS
                     LIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADS
                     LECEDQPLPPPGEGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
     gene            complement(36712..37797)
                     /gene="aroC"
                     /locus_tag="OQQ26_000569"
     CDS             complement(36712..37797)
                     /gene="aroC"
                     /locus_tag="OQQ26_000569"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HCS1856150.1"
                     /translation="MAGNTIGRLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHD
                     LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
                     LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRQRAQNADVKTDIPRW"
     gene            complement(37832..38764)
                     /gene="prmB"
                     /locus_tag="OQQ26_000570"
     CDS             complement(37832..38764)
                     /gene="prmB"
                     /locus_tag="OQQ26_000570"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HCS1856151.1"
                     /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKEQLLAAREYFAIYKD"
     gene            38930..39481
                     /gene="smrB"
                     /locus_tag="OQQ26_000571"
     CDS             38930..39481
                     /gene="smrB"
                     /locus_tag="OQQ26_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HCS1856152.1"
                     /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
                     KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWLPPELP"
     gene            complement(39603..40475)
                     /locus_tag="OQQ26_000572"
     CDS             complement(39603..40475)
                     /locus_tag="OQQ26_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2544 domain-containing protein"
                     /protein_id="HCS1856153.1"
                     /translation="MSISEMKKWTIIFASLMLLVLSVVGASKSYAGDKLMSASFDSVR
                     VYYAMDTVTGAVASSVFNVTVITPKEVAYGKYDSFAYKGDTLRVISWSGSGSAPTLVL
                     TDFDTINNSNCPGIDTKIFRCAYMTFKITVASDDYGCPWIASFYSYTDLPGFGSYTAP
                     TVHNTICPTIPVASYDISWSENYVSHNKALRIQSTGSTVTTTLSTYLMEGGRLCDGSN
                     FSDNDGRGAYCRAVSELLTFTSYGCDKSTVTVTPTRHPVTDKVLHDIVVNVNTSSGQP
                     IDSTCRFQYVLNEL"
     gene            complement(40462..40986)
                     /locus_tag="OQQ26_000573"
     CDS             complement(40462..40986)
                     /locus_tag="OQQ26_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1856154.1"
                     /translation="MKKKRTLFFISSLMLLGSGTTIAGDNLHFTGNLISKSCTPVING
                     SQLAEVHFPAIAASDLMNLGQSERVPLVFQLKDCHSSTLFNVKVTLTGTEDSALPGFL
                     AFDSSSSASGAGIGIETAAGTSVPINNTTGVTLPLNQGNNSLNFNTWLQAKSGRDVTS
                     GDFSATVTATFEYF"
     gene            complement(41010..41453)
                     /locus_tag="OQQ26_000574"
     CDS             complement(41010..41453)
                     /locus_tag="OQQ26_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1856155.1"
                     /translation="MKRISLILLWGFCSMALSNVSFHGYLVQPPNCTISNAQTIEITF
                     QDVLIDDINGSNYEQTVPYSITCDTAVRDPLMEMILSWSGTPSDFDNAAVSSNITGLG
                     IQLKQAGQSFTINTPLVVNETDLPVLTAVPVKKSGVVLPEADFEA"
     gene            complement(41450..41998)
                     /locus_tag="OQQ26_000575"
     CDS             complement(41450..41998)
                     /locus_tag="OQQ26_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1856156.1"
                     /translation="MKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAVAASKSV
                     SMNLRVLVDAPPPCTVNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDLRLQM
                     QATTVVINGETVISTGIPGFGIRVQKSSDHTILDLTSGSWLPFNFSSGVPVLEAVPVK
                     QSGTTLAAAEFNASATIVVDYQ"
     gene            complement(41973..42725)
                     /locus_tag="OQQ26_000576"
                     /pseudo
     CDS             complement(41973..42725)
                     /locus_tag="OQQ26_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416839.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
     gene            complement(42745..45380)
                     /gene="yfcU"
                     /locus_tag="OQQ26_000577"
                     /pseudo
     CDS             complement(42745..45380)
                     /gene="yfcU"
                     /locus_tag="OQQ26_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112832.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein YfcU"
     gene            complement(45462..46025)
                     /locus_tag="OQQ26_000578"
     CDS             complement(45462..46025)
                     /locus_tag="OQQ26_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1856157.1"
                     /translation="MSKFVKTAIAAAMVMGVFTSTATIAVGNNGTARFYGTIEDSVCS
                     IVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDTQETMTTTFTGTVSSAN
                     SGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNF
                     KAWLVGATDAPDLGNFEANTTFQITYL"
     gene            complement(46709..47194)
                     /gene="sixA"
                     /locus_tag="OQQ26_000579"
     CDS             complement(46709..47194)
                     /gene="sixA"
                     /locus_tag="OQQ26_000579"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HCS1856158.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE
                     IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
                     VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
                     I"
     gene            complement(47397..49541)
                     /gene="fadJ"
                     /locus_tag="OQQ26_000580"
     CDS             complement(47397..49541)
                     /gene="fadJ"
                     /locus_tag="OQQ26_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HCS1856159.1"
                     /translation="MEMASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIK
                     QLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI
                     PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
                     VSTALEMILTGKQLRAKQTLKLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERI
                     LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
                     AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
                     VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
                     IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSP
                     VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
                     MLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVAERCVM
                     LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
                     TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
     gene            complement(49541..50851)
                     /gene="fadI"
                     /locus_tag="OQQ26_000581"
     CDS             complement(49541..50851)
                     /gene="fadI"
                     /locus_tag="OQQ26_000581"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HCS1856160.1"
                     /translation="MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
                     SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
                     DGKLQEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
                     DGAAAVILMTESRAKELGLVSLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTM
                     SDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGH
                     PFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            complement(51030..51314)
                     /locus_tag="OQQ26_000582"
     CDS             complement(51030..51314)
                     /locus_tag="OQQ26_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HCS1856161.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTL
                     AALTEKARSVESEPCKISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR"
     gene            51686..53011
                     /gene="fadL"
                     /locus_tag="OQQ26_000583"
     CDS             51686..53011
                     /gene="fadL"
                     /locus_tag="OQQ26_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708225.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HCS1856162.1"
                     /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
                     WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQTPQGQALAATANGIDSNTKIA
                     HLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYGLPIPT
                     ATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATSTSGDTL
                     FQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAG
                     TTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
BASE COUNT        13478 a        13976 c        13367 g        12256 t
ORIGIN      
        1 aaaacgggat ttaagaatcc cgtaaacgat taattaatca acataaggaa aagcgacatg
       61 aaaatttgta tcgacgacgg ctccaccaac atcaagctgg catggactga gaacggcgaa
      121 cgccgcaacg ccatcagccc gaacagcttc aagtcggaat ggtctgcgcc gttcggtggc
      181 acgcagcccg cgaactacat gcttgatggc gtgcgctatg gttttgatcc ggtcagcgat
      241 cgctttgtcc agacgaccga cacgcaatac cagtacagcg atgtgaatgt cattgccatt
      301 catcacgcgc tggtcaaatc aggcatcacg ccacaggagg tggatgtggt tgtcaccctg
      361 ccactgagcg agtatttcga cacaaacgca cagccggaca tggccaacat caaccgcaaa
      421 aaagcgaacg ttatgcgccc ggtggagtac cagaacggcg aagcattcac tatccgtaac
      481 gtacgggtta tgcctgaatc cattccaact ggctttaaaa cactggctga catgagtccg
      541 tttgaatccc tgctgattgt ggatttgggc ggaaccacgc tggatgtggc aaaggttcag
      601 gggcagttgg caggtatcag ccaggtattt tgcgatccac acgtaggcgt ttccctgatg
      661 gccgatgccg tactgtcggt gatggccact aacggtatgc gtaccagtca ccacatcgcc
      721 aataccatta tcgaacatcg ccatgatgaa gcctggctgc gccagcacat ccacaatgac
      781 gcacattacg ccagcctgat ggcggttatt cgtgaaaagg aagaaacact gaaacaacgc
      841 gtgatccgcg cgctggcggg tttttcgggt tacgggcggg tgatggttgt aggtggagga
      901 gcggagattg tggcacccgc tatccgagaa gcctgcggag ttaatgcgac tttcatcgcg
      961 gacggggtgc cacagtttgc tctggttaat gggctgtacg caatggacaa ggagtaaatc
     1021 aatgacgaca ccaaccagac gaataagttt ctatctgaag cccgccgccg tcaagaacga
     1081 aggcgaagca tgcgcctggc tggacagcct tacaccagaa gcccgcaaaa gcggccaacg
     1141 cgtggctttt ctggccgggc tggcacttct gaaaattaat ccggcagagg cttaccgact
     1201 ggctgcatgg gctgatgatg aggcgttatc agtgacacaa accaggacag aacgccccgc
     1261 atcacagcca gtatcaaccg cacagataac cagtcagatg gccggaaata tccgggcgtt
     1321 atttcccgaa taacacaaca tcagggcgca tccgccctga tgactttaac ccgggaacat
     1381 aaacaagggg gacacaatgc aacacattga cagagaaaaa gcgcagcgac tgattgagcg
     1441 gatggaagcg ctggcgaaag aagaaaatgt caacatccaa aaaatagctg aatgtggcca
     1501 gatagttctt cgtcgtgaaa aagacctcaa acaactgatg tctggcaaaa ccagcaaaac
     1561 atgggcttca ggcgaggaaa cgatttattg cagcttctgc aataaatccc agtacgaagt
     1621 cacaaaggtg attgctggac cgtctgttta catctgcaat gagtgcgtgg atttgtgcaa
     1681 tgaaattatc aggagagaag tggcagacaa aaagggaaaa aacacatgaa cagaaaacaa
     1741 aaacaagagt tgaaatactt tttacgtaaa gaaattgcca ggcttgaaga tgcagaatca
     1801 cgatcatcag aaattccgtt cggaatggat atcaacgacg cccgtatgct ccaggcatac
     1861 cgtatagctc aggctgcact acaggcaaaa ccgtcagatg gactggttag agcagtacgt
     1921 ttctatgaac tggtaaagcg tgagaatccg ccaactgaaa ccggagcatg gaaagacgct
     1981 gttgactggg tgctcagaga agcttgccag actgtaaaca ttggtatcaa aggagagtga
     2041 gagtgcagat ttcaccggtt actcttcgtg ttgcgaaggc atttatatcc agacatcacc
     2101 gacacaataa acccccggtg gggcataaat tcagcattgg tctgagaaat gatgccggag
     2161 aattgatagg tgtggcgaca gccggtcgac ctgttgcacg acatttggac gatggattaa
     2221 cgcttgaagt aaatcgcaca tgtaccacag gagaacgcaa cgctaacagc gcgctttatg
     2281 gtgctgtctg gcgggcagca aaagctatgg gttatcaacg ttgtattacg tacacccggg
     2341 cagatgaatc aggagcatct cttcgcgcag ctggttttgt tcgtgtgaaa gagcttcctc
     2401 caagaaaaag ctgggcggaa tcaagcgtcg ccctgcggag taaacgcgat ccggtcggaa
     2461 acggtggtgt tcctcgtgtg ctctgggaaa tcaggagaat gagtaccact ggcattcgca
     2521 tcaaaggaga gtgatatggc aactttaaca aaaaaagaac gggcatggtt gaatgaatta
     2581 caggacgttc ttgatcgctg cccatcaccg aaaaaaattg gtttttacac cattggcgat
     2641 aaaagcattt acctgtatga cctgcgccac atggatgaaa tcatggaggc tcttgataat
     2701 cgttcgtcaa tggattggtg tgttgctgtt catgatatga atgcagggtt tgatgaaaag
     2761 attttgttcc cctcatcagt tgaaagcaca gcaggataag gactaacaca tgacaacttt
     2821 caccgacaaa gaactgatta aagaaatcaa agagcgcata ggcagcctgg acgttcgaga
     2881 caatattgag cgccgtgctt atgaaattgc actggtatca ctggaagcag agccagtagc
     2941 atggatgcat gtaaataacg gcatcggaat accagcaata acaaggagta aagaggttgc
     3001 agagagttgg ttatcaaaag gctggtatgt ccaacccttg catctagccc agcctgcatc
     3061 aaagctatag aaatgagccc aaacgccctc ttccagggcg tttattttaa tgcacaatag
     3121 tgcacaaatt tgcacaattt ttttgaacga ctttttaccc ttccagcccg cgtggcggct
     3181 ggatccgtca aggatccgtg cgtgcacaaa aaaacgcgct ttttctgcgc gcaggtgacg
     3241 ggggaacagc ccgcgtttca gggggtaaat agcattccct gaacgatgtc gcagagacac
     3301 aacagaatgg ctatatttct tacgctgagc gtgaaaaaga cgtgagggct tttgatttga
     3361 tgggtggcag ataaggccgt caaaatcgca ctgaggcggc gagaacatgc agtcaacgcg
     3421 gtgggattgc gtaagagtct gaccgccgat gatgacaata agcagaaaag cgtcgtgaaa
     3481 ttatctgatt gatacaggag ctggagagtc ggggcataaa ttttttatgc cccggcgaag
     3541 cagcagacaa gcgaagcgcg tcaggatgtg ggctgggtat ctagcagtgc gtaagggtta
     3601 aagcggatca cctcttcgcc aagccagtca ttgatgtgct tcatggcctc catgacgggc
     3661 atcagctcgt taattgcgta aacccgcgcg gccttctcca catcaccaaa cgcacttttt
     3721 tcgcccggca tcgcccccat cagttgcggc ggaacgcggt gcgcagccag cacatcatca
     3781 cgggatgccg ccttaacatt catgaactca tcctttgcag tgttctgctg gaacggcaaa
     3841 atttgcacac cttctttgcc cccgttgggc gcatggatga gcacgttttt aaacgcacca
     3901 ccacgcgcgc cctgtaacgt ttctttcagg gagtccatgc tttcgcggtt tacctgcgct
     3961 gcaccgatgt agatgatgca cccggcgtgg gatccgttgt cgtagtacag ttttctgaac
     4021 atgtccgccg aatgagaaag gctggccgag agtaatgcgc caagatattc cggcatgccg
     4081 tagatttcct ggttaatatc cggattcatc aggtggcaca ctttgccagg gcgaaactgg
     4141 aacgcgtcct tgccatcctg cacataccac catgattcaa gatcgcttcc gcgtcgcatg
     4201 tatttcgcca gtgcgtgccg taatttaagc ggttcgccga gcatattgct tctaagctca
     4261 aggaatgcgt taccgaacac aaaccagtcc agcgccagcg ccgagaaatc ctgccgggaa
     4321 agcagcgggt gcgggatgta gcaaccgagt aatacattgc gcttaaagta aagcgcagac
     4381 tgatgccagg acgtttgacg ggctgctctt gccagaccgt accagtccac cggggtttca
     4441 taccaccgtc cgttatcagc acagtacata ttgtccagca ggtcatgccc ggtcaggcga
     4501 taaggaccat caaatgtgaa tgcactgagc gatgattctt tcctgagcgc atcagcgaga
     4561 tcaatgcgtg aactcatgcg cactttttta ttttttctgc tcatcagaac tccataaccg
     4621 tgaaacgctc gttttctcct tcgccgccaa tcggttcgtt aatgacagca agcatggttg
     4681 cccacgcaag gtcgccgtgg ctgatccccc tcgcgcggtc cgtttcgtaa gtgataaagc
     4741 cgcccggtgt tttcacctta cgcacggcgt taaaggccgc gaccagctcg cgttcggcgc
     4801 gatcgtattc ccaccgcccg gcacgcatta tttgcagcat tttcagtacc agcgaccgtt
     4861 ttgatgacag cgtgaaggtg tacggaatag cagcagggaa aaaccgtttc actatctgat
     4921 aaacagcctc cccgttcccg cccgtcacat caatgccgat gtgttccacg ttgtagcgat
     4981 acgtgaactc ttcaatgact ctggcctgtt cttcaaactc cagcccctga acgcgtcgcg
     5041 tctccaccgt tcgaaaacgg ccaccaggaa cagccggagg aaccaccacg gacacagcgc
     5101 cgctgtcgcc gttgccactg ctgccgtttg cgtcataccc aatccatacc ggacgattcc
     5161 ccatcgggcg gggagcaaaa ggtttccagt ctttccagtc gtcgtatccg tcaacactgc
     5221 agccaatcag gatattcagg ttaaatgccg attccccttc gcgaacaaac tcacacatat
     5281 agagattgag gaactcgtct tcggtgtttt catcacggat ttcgtcaata tcggtgtgtt
     5341 tccagccgtg attaaccaca tcttccagcg tgacaatttg ccgccacgtc cggtcagggc
     5401 agataagccc gttatgcagc gttttccagt ccacagaaaa acgctggcgt ttatgcgagg
     5461 cctttttctc gttccagcgg tcgtcgttcc agtaggcgta tgcctcgtgc gtttcggtgg
     5521 atggcgtgga gaagtaggtg cgccgcagtc cgctgagggt tgccatagcg ccagccacct
     5581 tgcgcagttc agcaaagcga ctgacccaga aaaattcatc aaaataaaaa ttgcccgtat
     5641 aggactgtgc cgacgcagca gaagtgccga gaaaatgcag ctctgcgccg ttggagagga
     5701 tgattttatc gccccctttc agctccacat caacttcagc cgcggccttc tgaataatgc
     5761 ttttaaactg gaacgcctga cgacgcgacg cagacaaaaa aatctggtta cgctggtaag
     5821 gttgcgccac attgtcacgc agcgccgtca gcagagcttc ctgtgcaaaa taccaggtcg
     5881 ccccaatctg tcgggatttc aggatcatcc tgttacgtat cccggcttcc ctgcaaagtg
     5941 tcagggagtc aaaccagccc cgctgatgcc actccagcct gctgatgatt ttttcccgca
     6001 gtgcggcaat ctgttccggc gtgaaatgat ttttgagttt tttcgcccgg cctttctttc
     6061 ctgcggccat cacatccggc tggccatcat gcagcttttt aagctgccgg gtcagcaggt
     6121 ctatttcctt aaagtcaccg cctgttttat tctgtttttc agtaagctgg atgaggcgcg
     6181 catcgatgga ctgcgtaaca cgctgcacgg gtggtgtttc atcccactgg tcgcgttttt
     6241 tccacgcata aatcgtgttc gggtttattc ccatcagacg tgatatctct gcgggcggat
     6301 aaccctgcca gtaaagttgc cgcgcacgct ggcgcacaaa agcgtcctga atcattgctc
     6361 cccctgagta attacaggaa gattacccgc gcgcgaaact gttctcctta accccctgtt
     6421 ctggccgttt tcttacaaca aaagcccttt gtatcagcct gttacgcttt gccatcatga
     6481 ctgaagaacc agtcagaggg gcaaaaacta tggctaatga aaaaaagaca tcccgcaaaa
     6541 agtttcgcgt ggctgtctcc ggtgtaacgg cagacgggcg cgaaatcaac ggcgacatgc
     6601 tgaaagctgc cgccaccagt tataacccgt ccgtttatgg tgcacgtgtg aatattgagc
     6661 acatcctgtc accactcccc ggcagcgagt tttccgctat gggcgatgtt gtggggttga
     6721 gcaccgaaga cataaccgat ggcccgctgg caggtcgcac ggcactgtat gccgaaattg
     6781 agccgaccgc tcgcatgatg tccctgctta acgatggtaa aaaaatttac tccagtattg
     6841 agctggaacc acagtcaacc atcacgggag gcccttacct gcgcgggctg gcaatgaccg
     6901 acccccctgc cagcctgggc acggaacgtc tggcctttgc ggcacaacaa cgtatgcaac
     6961 tgatgacatt caactgtcag cagggagacg tagcgatgtt taccgccgct atggagtcag
     7021 aacttatcga actcaccgaa caacgtcagg aagaaggcac ccagtggttt aaccgcgtta
     7081 tggggattat tggccgtgga cgcaaagcgg atgacgccag tttctcccgt attcaggaag
     7141 cggtggaagg tgtcgcaacg tcacaggccg acattatcga ccgttttaat gtgctggaaa
     7201 cccgccatca acaggacagc cagaaaatca ctttactgac cacagagctg gcagcactga
     7261 aggaaaaact gcgcacgcag gacggcgatc cgcagaaccg gttcaccgca acgggcgctg
     7321 cctccgacca gctggctgac ttctgataag acaaaggagc aaatttttta tgaatctggt
     7381 gatgtcagat attacccgca acaagctggg ttgctatatg gcgcagcagg cgtcgcttaa
     7441 caatatcccg gtttccgcac tggtatcgcg atttaccgtg gaaccctcgg tacagcagcg
     7501 ttttgaaaac gcctcaaagg aaagcaccga atttacaaaa agaattaacg tgatcggcgt
     7561 gaccgaccag aaaggcgaaa aaatcctcct ggataccacc gggccgattg cgcgcacgaa
     7621 taccagttat gacggcacaa aacgccgtaa cccgaataac gtggttgatc tgaaaaaccg
     7681 caaataccag tgcgaacagg tgaactacga cacgtttatt tcatatccgc agcttgatgc
     7741 ctgggcggca caccctgatt ttcagtcccg catcagcgca cagattgccc gacaggtggc
     7801 acttgaccgc atcatgatcg gtttcaacgg cacgtctcac gcggatgagt ccaacttcag
     7861 caccaacaag ttgcttcagg acgttaacgt ggggtggctg gagcacatca gaaccgacgc
     7921 cagcgaacgc gttatgaatg acgtgacgct gacctcccgt aacatggaca acaccgtggc
     7981 gcacgcgggt aagtatgcga acgctgatgc tctggtacag gacgcgcgct catccctgct
     8041 ggatgaatgg cacaaggaag ctgacgacct cgtggtgatt atggggcgca acctgtttaa
     8101 ctcgctgcgt ctgtccgtgc tgaacagcat cagcggccag aatcctaatg cggaattact
     8161 cgccgggcag ctcattctgt catcgcgcac cattggcggg ctgggcgtgt tccttgcgcc
     8221 gttcttcccg gattcaacga tgctgatcac ctcgttcaac aacctgtcga tttactggca
     8281 gaaaggttca atgcgtcgtc tgatgaaaga cgaaccggaa tacaaccgca tcgccaccta
     8341 ccagtccatc aatgacgctt atgtcgttga agactatggc aagtacgcga tggtcactgg
     8401 cctgaagttc gccgacagct aatcaactca cggcgggcat catgcccgcc tgtaacggag
     8461 agaaaaaatg attactcctg cacagcaaca ctggcagaac gtgatggcac agcgcgcagg
     8521 ccgggcgaat gaaggcgtgg accatgccgc gcgtaccgcg catgaagagg tgctgtatcg
     8581 tctgcgtctg gcacaggccc ggcttaaggg cgtacaggcc agaagcgcga aagccgccat
     8641 caaaaaagag ttgttgccgg acttttccgg ctggattgag ggaacgctgg aggctgacgg
     8701 tgggcagcag gacgaagtga ttgccatgct gatggtgtgg gcgattgact gcggcgatct
     8761 tccgcttgcg ctgcgtattg gcgcgtatgt ggtccgtcac aacctcatca tgccggataa
     8821 ctttggccgt actgctgcca cagtgctgac cgaagaaatc tgcaacccgg tactgacgca
     8881 ggccgggacg gatgccgacg cggatttgtc cgcctttatc gaaccactgg ataccctccg
     8941 ggagattgtc accgaccagg acatgccgga cgaagtgcgc gccaaattat gcaaggcgtg
     9001 cgcctttgcc cgccgtggcc tgagcgatgc ggacagcatg gccctgtcac tgaagctgct
     9061 gcgcgaagca atgcacctga acccgaacgc aggtgtgaaa cgcgagattg caaccctttc
     9121 ccgcgccctg aaaaaagctg attctgcagc cgcaccagaa gatgccagca caccgcagac
     9181 gcaggacgaa agcagcaaaa gtaaaaagac aacgcggaag cctgcaacac gaaaaaccac
     9241 cgcgacgcag aaggcgaagc gcggttaacg actgaccccg tcagcgggcg gcgtgcgcgg
     9301 tgttccggtt tgactccgtg accgtttaca ccgcgcaccc accgcccgat tttttcagga
     9361 gtgaacccca tgagtatggt tgccagaacc aaccccggac ccgcagagaa cgacatcacc
     9421 gataccgatg atggtgatac ccgtatttca gcgggcgcat tctggccgga tattgtgctg
     9481 cgtgagctgc gtctggcgat acgactgccg ggccgtgtga ccacctcccg cctgctgcat
     9541 accgccaccg gggccgtggc acacgttacc cgcgagctgg aagcgtggca gcaggaacag
     9601 caggcggctg gccatcagac gctggccgat gttccggcac ccgtaattaa cggagaaagc
     9661 gtcaatctct ggcactggcg caatgctgtt tataccgcca cacgcgccct gatactggag
     9721 cgttaccgcg atgcggacac aacggacaag ggcgaccgcc gggcggacgc actggatata
     9781 cagccatcgg atttgtggcg cgatgtgagc tgggccatct ctgacattct gtgccgcccg
     9841 cgaatctttg cggagttgtg ctgatgaaag ttaaggcact ggaaggcgac accgtggatt
     9901 cgctctgttt ccggtactac ggcacgacgc agggcgtcac cgaaaaggtg ctggatgcca
     9961 accccggact ctgtcagcag gtatttctgg acgccgggca ggaagtggag atgccggagc
    10021 cggagaagaa gaaacgagaa atgattcagt tgtgggggga gtagcagtga gcaccattca
    10081 aacagggatc acagagcagg ttattgcatg gctctttgac cacctgccaa cggtgtatgc
    10141 agtaggcgcg gcggtcagca tttccgcgct gatgagtctt tatgacggac gaacactggt
    10201 tcagaccgta acgggatcgc tggcgtgcgg cgttcttgcc atggccgtgg ccgggtcgtt
    10261 gcgcttcttc ggttttcctg aagatgccgt gacgtttatc ggcgcatcaa tcggttttat
    10321 gggggcagag aaagcacacg acaaggttat tgcggccttt aatcgcaggg tgaaggagaa
    10381 ggacgaatga gcaacacatt taaattcagc agccggagcg aaaagaattt gcagggcgta
    10441 aatcctgatc tggtgaaagt gacccgacgg gcactggaaa tctcggaagt ggattttggt
    10501 atcaccgaag ggttgcgcag ccgttaccgc cagaagcaac ttgtggccac gggtaagagc
    10561 cagaccatga acagccgcca ccttacgggg catgccgtgg atgttgtggc ttatatcggt
    10621 agccaggtgt catgggaatg gccgctgtac gaaaaaatcg cagcagcatt cagacaggcc
    10681 agccgggaac tgaatattcc ggtggaatgg ggcggcgact ggaagaccct gaaagacgga
    10741 ccgcattttc agttaccaca cggagcctat ccggcatgaa gctctggccc acgctgggcg
    10801 tcgctttcct tctgattgcc gcatggggaa catccatgcg tctgtcgtgg tcgctgggcc
    10861 gggagaacgc cagaaacgaa gcgcaggcca gcgcactgaa aagcaccgtc gacaccctga
    10921 atatcatcag caccggggta caggatatgc agcaggtgct ggcgcaactc cgcgtggaaa
    10981 atcaacaacg aaatcaggac ggagaggcca gacgtgaaca gctacgcaac gatattgcaa
    11041 aagatgaatg cgcccacgct ttgcctgacg ctcgttttac tgacaggttg cgcaggcacg
    11101 cagaacgcgc cacggccagc gccgtcagtc cggcttatac cgcagacgct gaccataccg
    11161 gtaacgcctc cccccttccc tgacactccc acatggggaa atctcggtat atggggcgac
    11221 cgccttctgg atgcactgga aacctgtaac acggataaac gggccattga attactggaa
    11281 cagcgcaggc tgcaacgact gaacaacgag gacaacaacc atgctgaaaa ctgattccct
    11341 gcgtgaagcc atgacccgtt catgccgatg gtgtcaggcc aacccggaaa aattcaccat
    11401 tttcgtggag agcggtaaca ttgaaacgac aggagaaacc ccatcgtttg tttaccgcta
    11461 tcagatggtg atgtttgtca tggattacgc cggggagctg gatgacctca cgctgccgct
    11521 gctggcgtgg ttatccgaaa atcagccaca gttgttgctc aaccctgagc gtaatcagga
    11581 catcaaattc tccgccgtta tcaatgacga tgacagcgcc gatctcctgt ttacgctccc
    11641 cctgcgggaa cgcgttcgca tcacgcgcag caatcagggc acaccgcagg cagaacacct
    11701 gccggagcca aaaccccgcc tgccatcttc cgaaggcgac tggtcgcatg tattccagga
    11761 tgtgacgtgg ggtgaaagcg atggataagg cattcacccg cgtggatgaa acctttgagg
    11821 ccatccgcga cagcctgaat cagcaggcca tcaataacat cgccagaaag ctggcacagg
    11881 atttacgccg cgcccagcag gcgcgtatcc ggtcacagaa agcgccggac gggaccgcgt
    11941 ggacaccacg cagacgccgc gtaacccgga tacaggaacg cattcgcttt atctggaata
    12001 acgaatcacg cacgctgaaa aactggcatc acgacacggg gaaatacggg cgaaccatta
    12061 ccgggtggga tgaggataaa aacaatatcc gcacgtttta ccgggatgac atcgaccgtt
    12121 ttctggaaat acgcacccgg cgcatcaacc aggacagcac aaagcgcgtc cccatgttcg
    12181 taaaactgcg caccacccgc tacctgaaag cccgtgcgga tgcttccggt gtgacggtgg
    12241 gttacagcgg cgtggctgca cgtattgcac gcgttcatca gttcggtgag cgcgatcagg
    12301 ttgcgccggg cattttcacc gattacccgg tacgtgagct gctgggcatc agtcaggcag
    12361 atgaacgcct gatttataac acggtgctgg gccggattgc ggaggctgta cggtgagcgc
    12421 agaactcatg cggctactga gcaacatcat ccgcaccggg atcatctctg aagttgatga
    12481 ggaatcctgg cgcgttcgcg ttcgcagcgg cgaactggaa acaggctggt tgcgctggaa
    12541 caccacgcgc gcgggagcct tcaatgtgtg gctgccgcca tcaccaggcg aacaggtggt
    12601 aattgcctgc atcggcggca acccggaaac cgccatgata attggcagcc tgtggagtga
    12661 tgccaatccg gcccccggaa aaagcctgaa agaaatcgtg gtcagcgcgc cggatggcgc
    12721 ggtgttccgc tacgacgcgg acgcaggcgc actgagcgcc agcggcatga aaacggccac
    12781 cctgcaggca tccgtcagcg tgacactgga tacgcccgtc gtggaatgca cagaccttct
    12841 gagaacagcg acgcttgacg tcacaaaagg gggaaagatg agcggcaata tcacgcacag
    12901 cggcggcgat ttcacctcaa acggcatcac agtgcatacg cataaacacg gtggcgttaa
    12961 aggcggcagc gattcgacag gaggcccgca gtgacaaccc gctacacagg aatgaacccg
    13021 gacggaacgg gaaacctgaa cgatatggag cacctgaaac agtcagtcag ggacatcctg
    13081 accaccccgc tggcaagccg ggttatgcga cgggaatatg gcagccttgt gcctgatttg
    13141 attgacgaac ccatgaataa caccacgcgt ctgcaatgca tgagtgctgc cgtgattgcg
    13201 ctgacacgat gggaaccccg cattgccctg gatgccatcg acgttgtctg gaaagcggga
    13261 ggccgcgccg gggtgacgct gtcgggcact gtcatgcaga ccatgcagaa tgttgagtta
    13321 accatcacgc tgagggagta aatcatgccc gccgttgacc tttcccagtt accggaaccc
    13381 gccatcatcg cggagcctga ctttgaagca attctggctg acacaaaggc catgatgatt
    13441 gcgtcctatc ccgccgaaca gcgtgaagcc gtttccgccg cgctggagct ggaatcggaa
    13501 ccccttaacg ttatcgctca aaccatgtcg tttcgtgaaa tgctgttacg ccagcgggtc
    13561 aatgagggcg cacgcgcctg tatgttaagc cacggttcag ggacaaacct ggacaacctc
    13621 gcgggcaata tgaacacaaa gcgcctggtt atcactccgg caacggatac caccgacgcg
    13681 gtgatggaga gcgacacctc gctgagactg cgggcgcagc gggcgtacga cggcctgagt
    13741 gttgctggcc cgtcaggtgc atacgagtat tttgcccgca gcgccagcgg tctggtgcgc
    13801 gatgcgcggg ctatcagtcc gtctccggcc tgtgtgacgg tttccatcct gtccactgaa
    13861 ggcgacggca cagcaacgga ggcgttgctt aataccgttc gcgccgttct gaatgcagag
    13921 gatacccgcc cggtggccga ccgcctgacg gtacagagcg ccagaatcgt cattcaggaa
    13981 gtggctggct gaacaggggc ttatcggtca ggacgtggcg ttgtccgcca ttgctgccgc
    14041 actgcatgtg cacggcgtgc aacgcgtgga gataatcgaa cccacacaga atatggccat
    14101 cagcgacata caggcggcgc gctgtgagtc atttaccatc agcgaaggtg ggcgcaatga
    14161 gtaattcact gttaccgcca tcagccagca gtttcatgcg ttgtgccgaa gcagtcggaa
    14221 cacgcattac agacattccg gtagacctca acacgctgtg gtcgccggac acctgcccgg
    14281 tgcacctgct gccttatctc gcctgggcgt tttccgttga ccgctgggat cgcaactggc
    14341 cggaagagac aaagcgacag gtgattcgtg atgcatggct gatacaccga cacaaaggga
    14401 ccatcagcgc actgcgcagg gccattgagc cgctgggata cctcattcgc gtgtctgagt
    14461 ggtgggagtt cggcggagaa ccgggaacat ttaccgttga agtcggcacg ctggacagtg
    14521 gcgtgacgga ggaaatgtat ctggaaatgg agcggttgat tgctgatgcc cgcccggtca
    14581 gccgccacat gacagggctg aatatcattc aggagatccc gggggatatt ttcgcggcgg
    14641 cagcaactta cgacggtgaa gtcattacca tttatccgga cgattaagca tgagtaccac
    14701 aacacgaaaa tttaaaacca ttatcactga tactggtgcc aaaaaattag ctcaggctgc
    14761 cgcgccagat ggtaatcctg tccgcctgac tcatatggcc gtgggcgacg gtggcggcac
    14821 gttgcccaca ccagacagta agcagacccg tctggtgcat gaggtgtggc gacatactgt
    14881 taatcgcgtc atcctggacg caacacatca gaaccgcatt attgcggagc tggttattcc
    14941 tcctgaaacg ggcggattct ggatccggga aattggtgta tttgatgagc acggcgattt
    15001 gatcgcggtg ggcaatactg ccgaaagtta caaaccaacc gttgccgaag gatccggacg
    15061 tgcacaaaca tttcgcacca ttctgaccgt atccagcact gccaccgtgg cgcttaccgt
    15121 ggataacacc atggttatgg ccacagtgga ttacgtgaat gacaaactga aagaacatga
    15181 acagtcacga cgtcacccgg acgcctcgct gaccgcaaaa ggctttgttc aactcagtag
    15241 cgacactaac agcgtgtctg aaacgcaggc tgcaacgccg aaagcagtaa aggccgcgta
    15301 tgatcttgct aacgggaaat atactgcgca ggatgccacc acagcgcgaa aaggccttgt
    15361 ccagctcagt agcgccacca acagcgattc tgaaacgctg gcggcaacac caatggcggt
    15421 aaaggcagca tatgaccttg ctaacgggaa atatactgcg caggatgcca ccacagcgcg
    15481 gaaaggcctt gtccagctca gtagcgccac caacagcacg tctgaagcac cggccgcaac
    15541 accgaaagcg gtaaagacag catatgacct tgctaacggg aaatataccg ctcaggacgc
    15601 tacgacagca caaaaaggga ttgtccagct aagcagcgcg actaacagca catctgaaac
    15661 gcttgccgcg acaccgaaag cagtgaaagc agctaatgac aatgcgaatg gtcgggtacc
    15721 ttctgcccgt aaggtgaatg gtaaggcgct ttcagcggat attacactga cgccgaaaga
    15781 tattggtacg cttaactcaa caactatgtc attcagcggt ggtgctggtt ggttcaaatt
    15841 agcaacggta accatgccgc aggcgagttc tgttgtttca attacgttga ttggtggcgc
    15901 gggatttaac gtagagtcac ctcaacaggc aggtatatct gaacttgttc ttcgtgcggg
    15961 aaatggaaat ccaaaaggtc ttactggtgc gttatggcga cggacatcgg ttggatttac
    16021 taattttgca tgggtgaata catccggtga tacctatgat gtttatgttg aaataggtaa
    16081 ttacgccaca ggtgttaata ttcagtggga ttataccagt aacgccagcg taacgattca
    16141 tacttcacca gcatattctg ctaataagcc ggaaggatta acggacggtt ctgtttattc
    16201 gctgtatatt tcgcctcatg aactttatcc ggttggcgca ccgatccctt ggccatcaga
    16261 taccgttccg tctggttatg ccctgatgca ggggcagact tttgacaaat ctgcataccc
    16321 gaaacttgca gccgcttatc cgtcaggcgt gatccctgat atgcgtagct ggacgattaa
    16381 gggcaagccc gccagtggtc gtgcagtatt gtctcaggaa caggacggca ttaaatcgca
    16441 cacccacagc gccagtgcat ccagtacgga tttggggacg aaaaccacat cgtcgtttga
    16501 ttacggtacc aagacgtcca gttcatttaa ccatggcact aaaaccacga atagcgccgg
    16561 ggatcattca cacaatattc ctgttggtaa cactggtgct ggtaatggtg tttcggctgg
    16621 ttataactca gggcttggca ctggaaaaac aagtaacgca ggggggcact ctcacacagt
    16681 aaatattggc gcacacactc atacggtagg aattggtgca cacacacact ccgttgcgat
    16741 aggttcacac gggcatacca tcaccgttaa cgctacgggt aacgcagaaa acaccgtaaa
    16801 aaaacatcgc atttaactat attgtgaggc ttgcatgatt acgctcattc tttctgcacc
    16861 agtaacagaa atggctgaag catttaaacg gatatttgca aatgcagata gtgtgaatat
    16921 tgtcggaaag ccatttgaaa caatcagaca atttgactgc atggtaagtg cggcaaatag
    16981 tttcggcctg atggatggtg gcgttgatgc cgccattacc gcattcttcg gtactcagtt
    17041 acagtcccgc gttcagaatc atattcttcg tgaatatctc ggcgaacagc ctgtaggttc
    17101 tgcatttgtc attgaaacgg ggcataatca tcacccctgg ctggtacatg cgccaacaat
    17161 gcgtgttccg ttgacaattg acggaacaga cgctgtatat aacgcaacct gggccgctct
    17221 gcttgccatc tttcagcaca ataaaaacgc aacgacagac atgaaaataa aaacagtggt
    17281 attccctgca atgggggccg gatgtggtca ggtgccgttt gaaagtgttg cacgacagat
    17341 gaagcaggca tgggataact ttaataaaaa aacagaatca attaactggg aatacgcaca
    17401 atctcgccag tcggcagtat ttggcacata tgcatactgt ccgggtaatt ctgtttgccg
    17461 ttatgcggat actaaatata ttggatgcgg cgattatcgg acgtgttgct cacgttccgg
    17521 gcaagtctgt attaaccctg aacatcaggc tgatgatgta ctgatacaac atcaggctaa
    17581 taaccgtttt cgccctggtt cgcatataca ccggattaat ccagaaaatc ccgtaggtaa
    17641 tgtcacctct ggcgcacata gccacggaag tagcatcgtt attggtactc ccacccatac
    17701 gctcaataaa caatattctg tctctgatat taagtagagg tgaacatgga tttcagaatg
    17761 agtgaacaat cacggccata aaaatttata acctgctggc cggaactaat gaatttattg
    17821 gggaaggtga tgcatacatt ccacctcata caggtctgcc tgcaaacagt accgatattg
    17881 caccgccaga tattccggct ggcttcgtgg ctgttttcaa cagtgatgag gcatcgtggc
    17941 atctcgttga agatcatcgg ggtaaaactg tttatgacgt ggcatcaggg gacgcgttat
    18001 ttatttctga actcggtccg ttaccggaaa atgttaccta gttgtcgccg gatggagagt
    18061 gtcagaagtg gaacggcaca tcctgggcga aagatgcaga agcagaaaaa ctgtttcggg
    18121 tacgggaggc agaagaaaca aaaaacagcc tgatgcaggt agccagtgag catattgcgc
    18181 cacttcagga tgccgtagat ttggatattg cgacggagga agaggcatcg ttactggctg
    18241 catggaagac atatcgggta ttgttgaatc gtgttgatac aacagtagca gcggatgttg
    18301 agtggccagt cgccccacaa taaaaagaaa aagccatcga caaaaatatc gatggcttta
    18361 tgtactctat ttatacaata caacaccact ctttttagtt atatatgtgc aatttgatgg
    18421 tatatcttta tttataaaag acattgcacc tatttttaca ttatccccaa ttttacgtga
    18481 taatccaatg atgcaacaat tagctccgat atcaacgtta ctaccaattt ttactcttga
    18541 accaggcata tcaccatcta tctgtccaat ggtagtattc tgtcgtaata ccagattttc
    18601 acccgcatca acagcaaaat gaacaacaat tccagcatga tggggaattg tcaacccttt
    18661 tccaatattt gcgcccaatc ctatttcaca accaaacttg ttaattattt tactgtttaa
    18721 ctttttggct gctttcttat gtaatttatt accattaata tacatttcgt tagccaaccg
    18781 ccaccagaaa aggaaattcc ggttacgctg ctttttctct cttaaaagcc tccagatatc
    18841 catacgtttc cgccgaatta cttcatgttt ccagaagttt tttaaattag tagagtttcc
    18901 aaataaaaca aagtgaattg ccattaagta agatagcacg ataatctcct taattattat
    18961 ttcagaccac acatgttata aggttaagag attataaaat cctgttattt gttattcaaa
    19021 aacaattttc tgagaaggac atacaacagc aagtcgccag tcaccttcat caggaaattg
    19081 gcgacatacg ttaaatcaga gcagcccctt aactgagctg gccgcgctat taagggatga
    19141 tgtcacctta tctttgaagc cggacagcat atcgctgaac gatgaggatt gcaggcgctc
    19201 ccgcaaatcc tcatcacagc gttcaagagt cagtgaaaat tctatctttt tcgccttacc
    19261 gtagcgatca aactcggagc gggtcgtatt cgttccggtc aggacataca tgccgtaaat
    19321 ctgcccgacg ccatcaatca aaggccaagg acgtcctgta tatgcctgcg tggtcaacaa
    19381 cgacagcgac acttcgccac cagtaatctc aggataaaga acaccagaaa gaacgatgcg
    19441 atcatcacct gcaccgatat actgccagct tgctgaacgg ttaacgcgtt catttttcac
    19501 atgtcgccag cttttgtttt gctgtaactg ctgatgcggc aacgtgcgca gctcaaaaac
    19561 aaacatgccg tagatcatca tcatggccat gactcctcaa tctttatcgt aaaaactgcc
    19621 acgccaggca cgggcgcgcc gttccatttc tgccctgacc atttcaccga ccagtttcgc
    19681 cagttcgcgg ggattctgcg taacaacgtt atgcagatga acatgaattt caccgccaaa
    19741 tccggaggca acaggctccc ggttacggga agttgcagga actgatgcca ctggcgatcg
    19801 tatggcctcc gccaccgggc gggagctggc cgcaataaca gggaccagcg caggaggcag
    19861 cggagccgga accacggggg tgatattaat tgcgggggca ggcttactga cctgcgcaat
    19921 cttccgctcc tgccactccc cacgaacagc aagtgcgcgg ggcaggttct taaagacaat
    19981 atcgccgggg ccaatgcgtt ttttcgtctc atcaaccagc ttacctgtgt tatcagcaat
    20041 tttgctgagt ctgcgtagcg taccggtatt gctatctgtg agcggtttgt tgtctttggg
    20101 cttatcacct ccggtgccat tgccattttc cacaggcttc ggcggattga ttttcgccag
    20161 gtccccctga agcaaggcaa ccttgtcctg aagaatggcc gcacgctgtg cgtcttcgat
    20221 tttcttgcgc gccctttccg cttcatccgg aagcacaccg agcttttcaa gtatccacgc
    20281 cagcgtatcc agcaacattt ttgcaagtgt cagaacaagt tgtaacgcac cgccaagaac
    20341 gttaccgaat atctcgccag cactggtaca tttatccagc gtttccttgc tggactccat
    20401 cggtgacagc agcgatttaa accagttaaa cacctggctg atcccgcttc cgattgcttc
    20461 aaaaacagga ccaaaccgtt caaaggtttc gcgcaacggg gtcagccttt ccataatccc
    20521 gctgaacacc ccggcaaaaa atgccctgat gggatcccag tatttccaga taagaacggc
    20581 agctccggca agcgcagcta cgataagacc aaccggactg aacagcgccc cgatagcgcc
    20641 tcccagtaaa gaaacggaac ccgtcaccat tccccacagc gcaggcaaaa ccctgacgac
    20701 attcattgac cgggtaagaa tgtcaaaacc aagacgcagg gtggccagct tcccgtaaag
    20761 cgccccaata accagcgaca atgagccaat cgttgcagtc attgccagca acgcaccgcc
    20821 tgctatcagt agctggcgcg tcagtaccgg atgggcctgc gccagcgagg tgattttttc
    20881 aagcacccgc gtgaaccact gcgtgacaga acgcagcgga ccgtcaacca gatcactgat
    20941 gcgaatacga agaccttccc atgcgctgtc gagatttttc aggtccccat caagattatc
    21001 ggccattact tttgcaacgc gatcggcctc tccccttgcc ccctgcaatt ctctggtcag
    21061 tttttgcagc tctcctgaac cagccgccgc aacaagcgtc tgcaaaccaa cgaacgcctc
    21121 ttctccggcg atgtccttga agaaggagac ctggtccacc tgtccgtatt tttgtgtcgc
    21181 cttatagaga tcaagcagca catcctccat cgggcgcatt ttgcctctgg cgtcagcaac
    21241 tgacacccca agctctttca gcgcatcagc cgcagctttt ggcggtgatg caaggcggga
    21301 cagacttgcg cgcatggccg taccagcatc gcttccacga agaccattat tggcaagcat
    21361 cccggccatg gctgccgctt cttcaagact gataccaagt tttgcggcaa ccggaccggt
    21421 atacttcatg gtttcgccca gcgcgcgtaa atcagtattg gtccgggtga atgccgctgt
    21481 cagcgtatcg ccgacccggt ccatttgatc ggctgtcagg ttgaactgtg tgaggatatt
    21541 ggagcctata tcatctgtct cgccgagttc gacgccacct gccagcgcca tattaagaac
    21601 accgggcaat gcggcctgaa tggtctgcgg agtaaaacca gccattgcca gaaagctctg
    21661 cccactggcg gcatcactcg cagtaaactg tgtttcagag ccaagtttta acgcctgctc
    21721 acgcagcgct ttaaactgcg ggctgttttt gtctattcgc gtcagtgcct gaacgcggga
    21781 catctctttg ccgaacccga tcgcgggctg caaaaaacgc ccagcagcat agccgcccgc
    21841 cgctgccgcc ccaattgcca gcgcaccacc tgttttcagt tttcccgctg tttcctgcgc
    21901 gcgcgaatac cgctcacgcg cccgcgttac acgcgcaagc gcctgccgtt cgcgttcaag
    21961 ctggttgttg tactgttcgg tgcgtctgat ggcctgctgg atggtgttat cgctgcctgt
    22021 cagggaaatg ccgtggcgtt tcagctctcc gccaagctcc cgcattttct gaatttcccg
    22081 tgtgcgcgat tcattcaggc gttcaagccg ggtgcttaac tgctgcatca gcttttgttg
    22141 tttttcgctg agcactgtac ccgtgcgttg taactgatta agggcgttaa gctggcgtcg
    22201 tgctttcacg atgcccgcat ccgctttact gacagcgtca cgggcgcgct caaatgaacg
    22261 cgcctgacgc tcgagatttt tgatcgcccc ctgagttcgc tggatggagt caccaaactg
    22321 ccccatcagg cggcgggcgt tttcggcagg ccgggtcagc ctgtcaacgg cgctgaaagc
    22381 gacccggata tcaagagtct tcattatctg cattcccgct gcgaagtgcc gcccgctcgc
    22441 gccagctaac cacttcgccg ggcgtcatca tgaagatttc ggcgggcgac cagttaaaaa
    22501 tggcggcaat atccgccacc agatcttcga tgtgctcaaa gcacaccagg gtgattacgc
    22561 tgccgtctcc tgcacgctct tcgcgccaga gtctggctcg ctcataaaat ttacagccac
    22621 agcgcacaac tgaataaaat cgcgtgacga cattttttta atcatcactt catccagtcg
    22681 tggcgaggtc acgcgaggca acagcgtaaa catggtatcc gctttcagat tcagcacatc
    22741 agacagcgac agaccacgca gggatccacc ctgctcaata gccccggtga tctccacata
    22801 cgtgattttt tcgccaccac gctcaattgg tcgggtcagt tttacgccac gttcgacagc
    22861 catatcctca cctgccgtca catcatccgc cacggtgtta ttccgggttt cagtatcgat
    22921 gtctttcatt agttgtctcc ttttcagtca gaggcgacgc actgcgccgc ctgcatatta
    22981 cttatcagcc aagcccaagc gcggaacgga tacggtcagg cacaatgtcc ttgccgtcct
    23041 tccggtagat gtggttcaac aggtcgattt cccacagcgg gcgatcgtta acgctcagct
    23101 tgtagtaggt gtttttgaca gcgtaagtgt gtgatgtggc ttcgccctgt ttggcttccc
    23161 catatcaatt tccgtcacac gcccgcgcat ctcgatttca tacagatcgc tttctgcatc
    23221 ggtgtagtat tcacccgcaa aacgcagcag cgtgccgtca atcgtgccgc catatttaag
    23281 gaacagcgca cgaacagctc cccccatgac aaaactcgca tcaagcgcgg agtcgtccag
    23341 accgagatca atacttaccg cccccatcat gccaccacca cgatagctgt cggttttgcg
    23401 cgtcagtttg ggcggcgtga cggatgtcac tttgcccact tcgttttcac catccacaaa
    23461 caacgtaaaa aagcgaagat gttttggtac agccatcagg cacctcccag caccgcaaat
    23521 gcgggaccaa agaattcatc agtaaacgtc tggtaaagct ccatgtcttc cagtggcgga
    23581 acgggcgtat atttgtagcg aatacgcaca cgtccctgac gtaaatccgt ggtgccgtta
    23641 tccaccacgt cataccagca ctccgcacca atcagtttcc cggcagtaac cagcgaatcc
    23701 agttttgccc tgatggcgct gataacatcc ttcacgttcg caggtgtcag tggactgtcg
    23761 atggtttcaa actgcgcttc cgcaattgaa tcagccagca cctgtgcggt tcgggtatac
    23821 acctcaaaga tgtaggcgtt cgtttccggt gtgcggttgc cccagaagcg gaacccgttg
    23881 cggcgaatga tggtggtgat ttccttgttg ttgaggctgt tggcgtcact gtcctcggcc
    23941 tgtaacgacc agaaaacatg ttttgacatg cccaggacat ttttaaccgg aacattggac
    24001 agcgatttgt gccagccctg ctcatggtca atatacgcac gaaggccgca cgcataagca
    24061 ggcgcgggga acgtttcgtt tttaccactt ttcgggttgt aagcgataaa atccggccac
    24121 agaagcatca cctcacgttc gttgaatttc tggcggtaga taatcgcctc agccatcgtg
    24181 ttacagccgt gacatgaggc atacacaaac gcgcgcagtt tacccgcaat cacgcacagg
    24241 gattttgtta ccgcctccgt gtccagctcc ggcgcggcca gaatacgcgg acggtatccg
    24301 atgctttcat cctgctctgc aacaagcagc gcatacatcc ccgtatagct gccgtcatcc
    24361 tcagaaccac cgataaccag ttgatcctgc gtctttccgt cttcttcttt gtgttcagcc
    24421 acgcgaacga cgatcacctt tgtgctcacc tggtctgcga tggccttaag cgcacgataa
    24481 agcgtccccg ttgtcccgca ttttcccagc acgtcattga cgcgggtcag cagtgtgggc
    24541 ttgttcagcg ggaacagctt cgcgtccgca tcatccgccg ttgccacgat accgataatg
    24601 ctggaatcaa catcgttaat cgctgttacc aggtcggtat tttccgtaac acgggcacca
    24661 tgaaaacgag tttcactcat agcttcagcc ccttgtatcc gttaaatgat tcggcaacaa
    24721 tcatcaccca ccacgcgcgt aatctcaccc ctgcgccgtt ctcccgccac ggcgacaaca
    24781 aaaagcagta accccctccg cacgcacatg cgaccatgcc gcacagggag ggaacagatg
    24841 accgacacca ccatgcaatt gctcagtcag ggcacagacc ccgtgaaaat gccggatttt
    24901 gatattctcg cggagggtaa agcgctgtca ggcgtggcag agcgcctgat gagcctgtca
    24961 ctgaccgaca accggggatt tgaggcggac cagctcacca tcacgctgga tgatgcggat
    25021 ggtcagttgc agctaccgcc acggggcgcg cgcctgacgg ttctcattgg ctggaaagga
    25081 gaaccgctga cagaaaaagg cacttacatt gttgatgaaa tcgctcacga atgaccgccg
    25141 gacaggctga ctgtttcagc cagaagcgca gattttcggg atgaatttaa cgttaaacat
    25201 gaagtatcct ggcatgatgt gaccgttgag cgcgtggtat ctgccatcgc tcatcggtac
    25261 ggtctgaaac cgcaaatcag cgaaatgctg atggagatcg aaatcgacca cgccgaccag
    25321 accgaagaaa gcgacatgtc cttccttacg cgcatggcgg aaatgctggg cgcaatcacc
    25381 acggtaaaaa gcggcaatct gttattcatc atgccaggtg gtggcgtgaa cgcacagggc
    25441 cagccgttgc catcgttcgc catcacacgc agcagcggcg atcgccatca gttccgcatt
    25501 gctgaccgcg aggcgtatac gggggtgcgc gcctactggc ttgatcttaa ctatgggaaa
    25561 aagaaaaaag tcagcgtgaa acgccgcaaa ccacccaaac cgaaaaagga gaaaagcagc
    25621 agccgtgaag gtgattatat ggaaggcgcg gaaggcaatg tgtttgtgtt acgcaagact
    25681 tatcagaacg agcaggcagc aagacgcgca gcggcggcaa agtggcagca gctacaacgc
    25741 ggagccgcag cgttctccat cacactggca cgtggacgcg cagaactcta ccccgaaatg
    25801 catggcacgg taacaggatt taaaagcgag attgataatc aggactggat tattgcgaaa
    25861 gtcgagcaca ccattgataa cagcggcttt accacgcagc ttgagcttga ggcaaaaatc
    25921 ccggaatgga tagcggaaac agagtgagca acttagaata gcggcagcac cacgttaagg
    25981 gaggtcgcta tgttccgttg tccgctttgt ggcgcatctg cccgtatccg caccagtcgt
    26041 ccggaaaatg attcaaacac cgtgcggcaa aagtattacc agtgtaacaa cttggaatgc
    26101 ggcgtatgct tctcaacact ggaagctttc cataaattca catcgaaaca tgcctccggc
    26161 gttcactctt cagaaggtat cccgtggcat gaactgccag cttcacacag gggaaacaat
    26221 cagatgagtt tgcctttacc tcagaattaa caggcagaat tgccggagta acaaaaaagc
    26281 gatagattac gcgcgggtgc ctttcggctg atggtcggag ggaatacccg aaggccagat
    26341 gtggaaaggc cccggaaaac atttttgttt aaccgaggcc ctaacatatc taccttaagc
    26401 aagtgatagg ttagcgcctc tccaacaaag gagcaagcgc tatgtcgcaa aaatcgctta
    26461 cggccatcac gttctgcgtg acggtaatcc tcatcatctg gatgctacac ggttcgctgt
    26521 gtgaaatacg gatgagcttc tggggagcgg agtttgcggc gttcttacag tgtaagcagt
    26581 aaggaaaccg cgacggggga gcaatccccc gtcaatcggt tgccagggta aggtcgataa
    26641 ggcaccctat ctcacagctc taaatgcaaa aattccatga aactgtggga tttttgcatc
    26701 acatactgac gcagctcagc ccttctatat gcctcactct ataccagcta atcaattgac
    26761 acttatcaat aaaaaaaatc tgataaaatc aaaatgtttt gtaacaaata tcaactcgta
    26821 ttaatccaaa ggaggcggat tacatggcat taatcaaatg tcctgaatgc cagaaagaag
    26881 taagcgattc agcattgtat tgccctgctt gtggtaaaca actacaaaaa cttaagcgtt
    26941 cattttttgg acggatcatt aagtgggttt ttatattatt taatattttt atgacctata
    27001 cgcttttagt tggactagga ggcactagtg aaataataaa taatgccaca tccgatgccg
    27061 aaaaagccgg tgcagttatt ggtacaggct taggtttaat taccattgga agcttatggg
    27121 ttattggcga tatcattatc ggaattttag tatttcttac taaaccaaag ggataataaa
    27181 atgaaaaata taattttttc tataggtgca tcatttatat caattagtgt actgcctgtt
    27241 cacgcagcaa ctgaacataa gaacttcaat gcagtactcc agtgccgagc aatagaaaat
    27301 aataaagaca gactttcttg ttacgataag tcaatacaac cgactcgaac gaaagttgct
    27361 gaaaaattcg aaagcagaga tcaatgccct gatgagaaag atgatgatag acgtttatct
    27421 tgttatgatc gtttcttttc tccaacattt actccatctg taaactcaaa atctaaaacg
    27481 gaaaagccag taacaacaga ggctcagcaa ccaaattttt ctgagatatc taaatgtcgt
    27541 gcagaaaatg ataaagaagc cagactaaac tgctacgata aactattccc acaggataaa
    27601 gccgttcaag ctgaatcaaa attagagaaa gccacagatg taggaaaatg gcacacatcc
    27661 attactacat cgccaattga tgattcgaaa aatgtaattc tatcgttaga aagtgatgat
    27721 tatatcagaa ctccatttgg agaagcggtt actcctactc tgtttatagc ttgccgagaa
    27781 aagaaaaccg aagtatttct tagttgggat gtatatttag gccttgaaca aaccagcatg
    27841 ctttatcgcc ttgataaaca gaaagcagtt gagcgaaact ggctagtatc tacagataca
    27901 aaggctgttt tttataaagg taatgacatt gatttcatcc gaaaactagc caactcaagc
    27961 aaaatgtata caaaaataac gccttataat gagagccccg taagtgcaac tttcaattta
    28021 aacggcctgt caaacgcgct aaaaccgctt caagctgctt gtaactggaa atagtattaa
    28081 atcatgtggc ttagccacaa tcacagataa cacaaagccc gtgaaaacgg gctttgtgtt
    28141 atctgtactc gaaaatgtgg tcactgcgtg gacactcgct gacataaatc cttttacatc
    28201 aataaattaa gtcatcattt ttttcatcaa caaggatttt cacgtttgtg ttacctgtat
    28261 gagacgagag ttaaccggac aagtgtgcca taatctcgcg gccaggcata cttgcgaaga
    28321 tttcaggtat aaggatacgt aatgatacaa cctatttccg gccctcctcc tgggcagcca
    28381 ccaggtcagg gagataacct gccgtctggc gcgggcaatc agcctttatc cagtcagcaa
    28441 cgtacttcgc tggaaagctt aatgacgaaa gtgacctcac tgacgcaaca acaaagagca
    28501 gaactgtggg cgggtatcag gcacgatatt ggtctgtcgg gagattcacc gctgctttcg
    28561 cgtcacttcc ctgccgctga gcataatctg gcgcaacgtc tgctggccgc gcaaaaaagc
    28621 cattctgccc gccagctttt agcgcaatta ggggagtatt tacgtctggg gaataatcgt
    28681 caggcggtca cggattatat ccgtcataac tttggtcaga cgccgctgaa tcagctctca
    28741 ccggagcaat taaaaaccat tctcaccctg ttgcaggaag ggaagatggt tattccgcaa
    28801 ccacagcagc gcgaggcgac cgaccgtcct ttattaccgg cggagcacaa tgcgctaaaa
    28861 cagctggtga ccaaacttgc ggcggcaacg ggggaaccca gcaaacagat ctggcaatcg
    28921 atgctggaac tttccggggt gaaagatggc gagttaattc cagcgaaact gtttaaccat
    28981 ctggtgacct ggctacaggc gcgtcagacg ctaagccagc aaaatacgcc aacgctggaa
    29041 tcactacaga tggcgctaaa acaaccttta gatgccagtg aactggcggc gttatcggca
    29101 tatatccagc aaaaatatgg cctttctgcg caatcatcgc tttcttctgc ccaggccgag
    29161 gatattctta atcagcttta tcaacggcgg gttaaaggga ttgatccgcg tgatatgcaa
    29221 ccgctgctta atccttttcc accgatgatg gacacgttgc aaaatatggc aacgcgtccc
    29281 gcgctgtgga tactgttagt cgcgattatc ctgatgctgg tctggctggt tcgttaaccc
    29341 cgacgaaatg acagtatcgt gacaataata cccagcaccg cagagatcgc cccggcaaga
    29401 aataccgaag agtaaccaaa cgtggtcgca agcattcccg ccagcggccc ggagacgccg
    29461 agggcgatat cctgaaacgc ggcgtaaccg cccagtgcgg tgccgcgaac ttgtgagggg
    29521 acgcgtttaa ccacctccac gcccagcgca ggaaagataa gcgaacatcc ggctccggtt
    29581 aacgccgcgc ccgctaatgc gacccatgca cctggggctt gcccaacaag cccaccgttt
    29641 ctacaagcag agagacaatc gccactttca cgccgccaaa acggtccggc atccagccaa
    29701 acatgacgcg catcacgaca aatgcgccgc caaacgcggt aagagtaaag cccgccatcg
    29761 cccatccttt gctggcaaag tagagcgaaa cgaaagtccc gataaccgca aaaccaacgc
    29821 cttgtagtgc cagccctaac cctggtttcc agataagccc gacaacgctc cacagcgatg
    29881 gacgttctcc cgccagggcc ggtactttgc gcactgtgcc gttacaggcc cacgccagta
    29941 agggtaatac cattgtggtg atcgccagtg cggcaaaacc gtaatggcta tgaatcaaca
    30001 ggccaagcgg agcaccaaca gcgagggcac cgtaaatcgc cattccattc catgacatca
    30061 ctttgccaga gtgttttggc cctacgatgc ctaaccccca ggtcagagcg cctgtcagta
    30121 actggctttc accaaaccca agaatcaaac gcccgatgac caacagggca aatttgaacg
    30181 gtgcggagac aggcaaaatc gccgccagca gcaacgcgcc gccagccaga ccacaagcta
    30241 acatcccctg aagcgccgaa cgttttgcgc catattgatc ggccagtcgc ccggcgtaac
    30301 cacgcgtcag caccgtagcc agaaactgaa tcccgacggc aatgccgacc atggtattgc
    30361 catagcccag atcatgatga acaaacagcg ggataaccgg caacggcaac cctacggtca
    30421 ggtaggtgag aaaaaccgca aaagcgatgc ggaagagcga aaaattggca gaagatcgtg
    30481 tttcggtttg gcttacagca gtcatgcatt actccagaat gcagcgcaag gcgaggagta
    30541 tccccgtctc atctctctgg tttcagggtt acggtgcgtt ggcaggattt aacgtgtacg
    30601 tcttttcaga aggaaatcga caaagcggga agtttgcctg gaactggtgg cgattgtcaa
    30661 tgatgtgaaa aagggaacca tcgggttccc ttttgtgtta gtgccggagg ccgcattggc
    30721 gcgtaacgtc ggatgcgacg ctggcgcgcc ttacccgacc tactccgact tactgcgaat
    30781 taatctttca gcttgcgcat taccagcgtg gcgttggtgc caccgaagcc gaagctgtta
    30841 gacataacgg tggtcagttc gcgatcggtc gtttcggtca cgatgttcag acccgcagcc
    30901 tgctcgtcca gctcttcaat gttgatgctc ggggcgataa agccgtgttc cagcatcagc
    30961 agagagtaga tagcttcctg cacacctgca gcgcccagtg agtgaccggt catggctttg
    31021 gttgcagaaa tcgccgggct cttatcgccg aacacttcac ggatagctgc cagttctttc
    31081 acgtcgccaa ccggagtcga agtaccgtga gagttcaggt aatcgattgg ggtatcaacg
    31141 ccgtgcatcg ccatctgcat acaacgtact gcgccttcgc cagacggagc aaccatgtct
    31201 gcaccatcag aggttgcacc gtaaccaacg atttcagcat agatgtgagc accacgcgcc
    31261 agcgcgtgtt ccagctcttc aaccactacc ataccgccgc cgccagcgat aacgaaaccg
    31321 tcacggtgag cgtcgtaagt acgggaggct ttttccgggg tgtcgttgta tttagtagac
    31381 agcgcaccca ttgcgtcgaa ttcgcaggcc atttcccagc acagctcttc gccgccacca
    31441 gcaaacacga tgtcctgttt gcccagttgg atctgctcta ctgcgttacc gatacagtgt
    31501 gcggaagtcg cacacgcgga gctgatggag tagttaacgc catgaatttt aaacggcgtg
    31561 gcgaggcagg cagaaacgcc ggatgccatc gctttggtga ccacatacgg gccaaccgct
    31621 ttcaggccgc gcgggccgcg cattgcgtca gcgccgaata cctggaaacg cggggaacca
    31681 ccgccagaac ctgcaatcag gccaacgcgc gggttattct ggtaagcttc cggagaaagg
    31741 cccgcatctg cgattgcctg ctccatagaa aggaatgcat aaatggatgc gtcgctcata
    31801 aagcgcacaa ctttgcggtc aatgaggcca gtggtatcca gttttacgtt gccccagacg
    31861 tggctacgca tgccggaatc cttcagctcc tgagagaaag tgatccctga acgtccttca
    31921 cgcagagatg ccaggacttc ctgctggtta ttaccgatgc tggaaacaat gcccaggcca
    31981 gtaatcactg cacgtttcat tcaatacctc tgtaagtcgc acatagagta agtttcgaat
    32041 gcacaatagc gtacacttgt acgccgaaca agtccgatca gccaattaat agagaaattt
    32101 gcgcagcctt acacacatcg ctaagatcga gccaccgcct gtaagacgag taacttacgt
    32161 gaaacactac tccatacaac ctgccaacct cgaatttaat gctgagggta cacctgtttc
    32221 ccgagatttt gacgatgtct atttttccaa cgataacggg ctggaagaga cgcgttatgt
    32281 ttttctggga ggtaaccaat tagaggtacg ctttcctgag catccacatc ctctgtttgt
    32341 ggtagcagag agcggcttcg gcaccggatt aaacttcctg acgctatggc aggcatttga
    32401 tcagtttcgc gaagcgcatc cgcaagcgca attacaacgc ttacatttca ttagttttga
    32461 gaaatttccc ctcacccgtg cggatttagc cttagcgcat caacactggc cggaactggc
    32521 tccgtgggca gaacaacttc aggcgcagtg gccaatgccc ttgcccggtt gccatcgttt
    32581 attgctcgat gaaggccgcg tgacgctgga tttatggttt ggcgatatta acgaactgac
    32641 cagccaactg gacgattcgc taaatcaaaa agtagatgcc tggtttctgg acggctttgc
    32701 gccagcgaaa aacccggata tgtggacgca aaatctgttt aacgccatgg caaggttggc
    32761 gcgtccgggc ggcacgctgg cgacatttac gtctgccggt tttgtccgcc gcggtttgca
    32821 ggacgccgga ttcacgatgc aaaaacgtaa gggctttggg cgcaaacggg aaatgctttg
    32881 tggggtgatg gaacagacat tgccactccc ctgctccacg ccgtggttta accgtacggg
    32941 cagcagtaaa cgggaagtag cgattatcgg cggtggtatt gccagcgcgt tgttgtcgct
    33001 ggcgctatta cggcgcggct ggcaggtaac actttattgc gcggatgagg cccccgcact
    33061 gggtgcttcc ggcaatcgcc agggggcgct gtatccgtta ttaagcaaac acgatgaggc
    33121 gctaaaccgc tttttctcta atgcgtttac ttttgctcgt cggttttacg accaattacc
    33181 cgttaaattt gatcatgact ggtgcggcgt cacgcagtta ggctgggatg agaaaagcca
    33241 gcataaaatc gcacagatgt tgtcaatgga tttacccgaa gaactggctg tagccgttga
    33301 ggcaaatgcg gttgaacaaa ttacgggcgt tacgacaaat tgcagcggta ttacttatcc
    33361 gcaaggtggc tggctgtgtc cggcagaact gacccgtaat atgctggaac tggcgcaaca
    33421 gcagggtttg cagattcgtt atcaatatca gttacaggat ttatcccgta aggatgattg
    33481 ttggttgttg aattttgcag gtgatcagca agcgacgcat agtgtggtgg tactggcgaa
    33541 tgggcatcaa atcagccgtt tcagccaaac gtcgtctctg ccagtatatt cagttgctgg
    33601 tcaggtcagc catattccga caacgccaga actggcaaag ctgaagcagg tgctgtgcta
    33661 tgacggttac ctcacgccgc aaaatccggc gaatgaacac cattgtattg gtgccagtta
    33721 tcatcgcggc agcgaagata cagcatacag tgaggacgat cagcagcaga atcgccagcg
    33781 gttgattgat tgtttcccgc aggcgcagtg ggcaaaagag gttgatgtca gtgataaaga
    33841 ggcgcgctgc ggtgtgcgtt gtgccactcg cgatcatctg ccaatggtag gcaacgtgcc
    33901 tgattatgag gcaacactcg tggaatatgc gtcgttggcg gagcagaaag atgaggcggt
    33961 aagcgcgccg gtttttgacg atctctttat gtttgctgct ttgggttcgc gtggtttgtg
    34021 ttctgcccca ctgtgtgcag agattctggc ggcacagatg agtgaagaac cgattccgat
    34081 ggataccagt acgctggcgg cgttaaatcc gaataggtta tgggtgcgga aattgttgaa
    34141 gggtaaagcg gttaaggcgg ggtaaccagc tttggcagtg tttgccggat gcggcgtgaa
    34201 cgccttatcc ggcacattac ttactgctgt gacgcctgct gaaacaggtt ttcccacata
    34261 tcggtcacca acgcctggtc acgcggcgac aattcaccgg caccaatggc tttttccaga
    34321 ctctggctaa cggtcgtatg taccgcctgg gcggagtggt catcaccact ttccagttct
    34381 gcgatggcta atgtcaggtg gccacgcaaa tacccactgg caaacaactc atcatcactg
    34441 gcatggtcaa ccataccgtc gattaatgcc agaatgcgtg attcaaactc cgcgatcatc
    34501 ttctttcctc attgtaaaac gtggcaccgg cttcagttga gcgcttccgg ccacgggaac
    34561 tgttccgccg taagttccgg cgtgtgataa taattttgta gtgctttaat gaagcgtgcc
    34621 ggacgctcgg gaatgccatt tgtcagataa tccatcacct gtgcatgtac tcgccgttga
    34681 aacaccacac gatccggttc gaagtcgcct tccagattgt cgcaactgac gttaaacgga
    34741 tatcccgccg ccacacagaa caaccagtcg agtgcctgcg gcttcacttc aacatcttca
    34801 aactggcttt gcgtttgggc atcacgccca tccgggcaat accagtagcc gaaatcaacc
    34861 agctcacggc gcgcttttcc ggcaatacac cagtgcgaaa tttcatgaat tgcgctggca
    34921 taaaaaccat gagcaaagac gattcggtta tacggtactt cagcatcagt tggaagatag
    34981 atcggttcgt cgtcgccttt aatcagacgg gtattaaatt catcggcaaa gcagctatta
    35041 aaaatttcaa tcaactgctc atagtggtgt gtactgttca ttagttcatc cccaaccagt
    35101 ggaggatctc ctgtccgtgg ctatcgtaaa gtaatttggc actcatcacc gccgagacga
    35161 taacaatcat cgggcggatc agcttttgtc ctttgctcaa caccagtcgt gaacccatgc
    35221 gcgcgccgag gaactgcccc accagcatca caaagcccgt cgcccaaatc actttgccgc
    35281 cgagaataaa cagcagcaga ccgccaatgt tggacgttgc gttgagtaat ttggcgtgag
    35341 ccgtggcttt ggcgaggttg aatccgcaca gcgtaacgaa ggccagcgcg taaaacgatc
    35401 cggcagccgg accaaagaat ccgtcataaa aaccgacgca gccaccggca attaacgcga
    35461 agggtaaacc gtacatccgg cgctggcgat cttcttcacc cagctttggc atcagcaaga
    35521 aatagaggcc gatacaaatc accagaatgg gcaaaatctg ccgtaagaca tcagcctgaa
    35581 cgtactgtac caacagtgcg ccgctcattg aaccgacaaa ggtcatggca atattgagtt
    35641 tctgatcgct taaactaacc actttgcggc gaataaagta gatagtggcg gaaatagagc
    35701 cgccgcaggc ttgcagttta ttggttgcca gcgcgttagc gggagacatt cccgcagcca
    35761 tcaatgccgg aatggtgagt aacccaccgc caccggcaat cgagtcgata aatcccgcca
    35821 gcatggcgac aaaaaagaga actcccagca acagcgggga aaccataaac aggctattaa
    35881 acgtttccat tagatcacgt gctcatccag tagcgcctgg caggaaggcg gcaacggagg
    35941 cggtgtcttc ttctcaggct ttgttgttcc cggttttgga ggttcaaacc agctttgcag
    36001 ttctgccccg caaccttcgc ctggcggcgg taaaggttga tcttcacact ccagactatc
    36061 ggcagggcaa cgtaatcgta catgcatatg cgcgcgatgc tggaaccagg gtcgcacttt
    36121 gcgcaaccag tcgcgatcgg tgcccgcatc aaggcaaagt tgttgtttaa tcgccggatt
    36181 aacaaaaatg cgcgtgacgt ctttgtcctg ggcggcgagt ttgatcaagc tgaaaatttc
    36241 tggcttccac agcgtggaga caacgtgttt accgtcgcgg gaaactaagt ccagtgcttg
    36301 cgggcgcaag agctgcgcgg aggtccagcg agtttttggc agttgcagaa agatatcgac
    36361 atccagtccg gtctggtggc tggcatgacc gccgttgaaa cgcccaccag cgggcatccc
    36421 catatcgcca atcagcaccg tacccagatt gctcacctgg ctactcagac gctggataaa
    36481 catcaccagg tccgggtgac cgaaatagcg acgctgatcg gtacgcatga cctgataatg
    36541 ttcggactgt atcggcagcg tgtcagcgcc gacgatacag ccattagaaa aactgcctat
    36601 cgattgtgcg ctacccggca caggttgggt tattttttgc cacggcgtcg ctgccaggct
    36661 ggcgctactg gcaagcagag ccagcagcgc aatcgcggtt ttgttcattt tttaccagcg
    36721 tggaatatca gtcttcacat cggcattttg cgcccgctgc cgtagcaggt gatccattaa
    36781 aacgatcgcc agcatcgctt cagcgatcgg caccgcgcgg atcccgacac aaggatcgtg
    36841 acggcctttg gtgatcatct caacttcttc gccaaagcgg ttaatagtcc gccccggcac
    36901 ggtaatgctg gaggtcggtt tcagcgccat atgggcaatg atttgctgcc cgctgctgat
    36961 accgccgaga atgccgcccg catggttgct ctggaaaccg tctttggtga tttcgtcgcg
    37021 gttctggctg ccgcgcagcg ccactacgtc aaaaccgtcg ccaatttcca cgcctttcac
    37081 cgcgttgatg ctcatcagcg catgggcgat gtcggcatcc aggcggtcaa agaccggctc
    37141 gccaagtccg gcggggacgc cactggcaac aacggtgact ttagcgccga tggagtcgcc
    37201 ctcttttttc agcgcgcgca tcagttcatc taacgcgtcg attttgtcgg ggtccgggca
    37261 gaagaacgga ttttgttcaa ccagcgacca gtctttgatt tccagcggaa tgtcgcccat
    37321 ctgggtcagg cagccgcgga tttcaatacc aaatttctcg gcgagatatt ttttggcaat
    37381 cgcccctgcc gccacgcgca tggcggtttc gcgggcggaa gaacgtccac cgccgcgata
    37441 atcgcgcaga ccgtattttt gttcgtaggt gtaatcagca tggcctggac ggaagacgtc
    37501 tttaattgcg ctgtaatcct gagaacgctg gtcggtattt tcgatcaaca agccaatgct
    37561 ggtgccggta gtaacgcctt caaaaacacc ggagagtatt ttgacctgat ccggctcgcg
    37621 gcgctgggtg gtatagcgcg atgtcccagg gcgacgacgg tcgaggtcat gttgcaggtc
    37681 cgcttccgtc agcggaatgc ctggcggaac accatcgacg atgcagccga gcgccagccc
    37741 atgcgattcg ccgaaggtgg ttacgcgaaa gagtcgtcca attgtgtttc cagccatcac
    37801 ggctccgtta ttgttgtgtt tgcgtgttta cttaatcttt ataaatcgcg aaatattcac
    37861 gggccgccag cagttgctct ttggtgagca taaacacacc atcgccgccg ttatcaaact
    37921 ccagccaggt gaacggaaca tccggatatt gttccataag atgtaccatg ctgttgccga
    37981 cttcacaaat caacacgcca tcatcagcaa ggtaatctgc cgcgtttcca agaatgcgac
    38041 gcgtcagttt caggccgtcg gtgccagatg ccaggcccag ttccggctcg tgacggtact
    38101 catttggcag gtcggacata tcttccgcat cgacatacgg cgggttagtg acaatcaggt
    38161 cgtactgcac tttcggcaag tcgcggaaca gatcggaacg aatcggaatg acgttgtgga
    38221 tcagaccgtg ttcttcgatg ttctgttcgg caaccgccag cgcgtcggga gagatatcca
    38281 ccgcgtcgac ttctgcatcc gggaaggcat aagcacaggc aattgcgatg cagccgctac
    38341 cagtacacat atctaaaata tgctgcggtt gcttgctgat aagtccggca aatttattgt
    38401 tgatcagttc accaatcggc gagcgcggca ccagcacgcg ttcatcaacg taaaattcat
    38461 ggccgcagaa ccacgctttg ttggtcaggt aagccaccgg aatgcgttca ttgacgcggc
    38521 ggatcacgcg ttcaacaata cggtgttttt cgctggaggt cagacgcgcg gtgcgcatat
    38581 cttccggaat atccagcggc aggtagagcg aaggcaacac caactgtacg gcttcatccc
    38641 acgggttatc ggtaccgtga ccgtaccaga tatttgccgc gctgaagcgg ctcaccgacc
    38701 agcgcaacat gtcctgaatg gtttgcagct catttactgc ttcatcaacg aaaattttat
    38761 ccacgtattc ctccagggca tgatcgcaat aatttcggcg gctagtttgc catgaagatg
    38821 acgataaatc agcattcacg cgcggtgagt gaggaaaaat acgtttaaaa cgatcgattg
    38881 tgctacgagt cgggtaaact gtaggaaaat tagaaataga gacagataaa tgaaaaagaa
    38941 aacaacactt agcgaggagg accaggctct gtttcgccag ttgatggcgg ggactcgcaa
    39001 gattaagcag gacacgattg tccaccgacc gcagcgtaaa aaaatcagcg aagtgccggt
    39061 gaaacgcttg atccaggagc aggctgatgc cagccattat ttctccgatg agtttcagcc
    39121 gttattaaat accgaaggtc cggtgaaata tgttcgcccg gatgtcagcc attttgaggc
    39181 gaagaaactg cgccgcggcg attattcacc ggaattgttt ttggatttac acggtctgac
    39241 gcagctgcag gccaagcagg aactgggcgc gttgattgcc gcctgtcgcc gcgaacatgt
    39301 gttttgtgcc tgcgtgatgc atgggcacgg gaagcatatt ttgaagcaac aaacaccgct
    39361 gtggctggca caacatccgc atgtgatggc atttcaccag gcaccgaaag agtacggcgg
    39421 tgatgcggcg ttgctggtat tgattgaagt ggaagagtgg ctgccgccgg agttgccctg
    39481 aatgctggca gcaaatgccg gagcagcata aacgccctat ccggcctaca aatgtgtgat
    39541 aattcaataa attgtaattc acttcgtagg cctgataaga cgcatcagag caatactacg
    39601 aactacagtt cattcaatac atactgaaaa cgacacgtcg aatcaatcgg ttgcccacta
    39661 ctagtattca cattcaccac aatatcgtgt agtactttat ccgttaccgg atgacgagtt
    39721 ggcgtaaccg ttaccgttga tttatcacaa ccgtaagagg taaaggttaa caattctgat
    39781 accgcgcggc agtatgctcc tctgccatca ttatcagaaa aattactgcc atcacagagt
    39841 ctgccgcctt ccatcaggta ggtcgaaagc gtggtggtca ctgttgaccc cgtggactga
    39901 attcgtaacg ccttattatg gctgacataa ttttcactcc aggagatatc gtatgaagcg
    39961 accggtatcg ttgggcatat tgtgttatgc actgtagggg ccgtatagct tccaaatccg
    40021 ggtaaatctg tataggaata aaaggatgcg atccaagggc aaccataatc atcagatgca
    40081 acggtaattt taaacgtcat atatgcacaa cgaaaaattt tcgtatctat gccagggcaa
    40141 tttgagttat taattgtatc aaagtcagtc agtaccaaag ttggagctga acccgaccca
    40201 gaccaggaaa taacccgcaa cgtatcgcct ttatacgcaa aagaatcata tttcccatac
    40261 gcaacctcct ttggcgttat caccgtaaca ttgaaaacac tgctcgctac agcaccggtt
    40321 accgtgtcca tggcataata aactctcaca ctgtcaaaac tcgcactcat aagtttatct
    40381 ccagcataac tcttagatgc gccgacaaca ctcagaacga gcagcattag gctcgcgaaa
    40441 attatggtcc attttttcat ttcagaaata ctcaaaggtt gccgtcactg tggcactaaa
    40501 gtctccggac gtaacatctc gcccgctctt tgcttgtagc caagtattaa aatttaggct
    40561 gttattcccc tgattcagcg ggagcgtgac gcctgttgta ttgttgattg gcaccgatgt
    40621 gcctgccgca gtttcaatac caatcccagc gccggatgct gatgacgagg agtcaaaggc
    40681 cagaaagccg ggtagagcac tatcttctgt tcctgtcaac gttactttga cattaaacaa
    40741 tgtagaacta tgacaatctt tcaattgaaa caccaatggc actcgctctg actgcccaag
    40801 gttcattaaa tcgctggcgg caatggcagg aaaatgtact tctgccaact ggctaccatt
    40861 aatcactggc gtacacgatt tactgattaa attgccggta aagtgcaaat tatctcctgc
    40921 tattgtggtt ccactgccca gcaacatcag gctactaata aaaaacaacg tacgcttttt
    40981 cttcattggt aatctacctg taacgtggcc taggcctcaa agtccgcctc tggcagaacg
    41041 acaccactct tttttactgg cacagccgtt aacaccggta aatcggtttc attcaccaca
    41101 agtggcgtat tgatcgtaaa actctgccct gcctgtttga gctgaatgcc taaaccagtg
    41161 atattgctgc ttactgcagc attatcaaaa tcgcttggtg tgccactcca gctcaagatc
    41221 atttccatta atgggtcgcg aaccgccgta tcgcaggtaa tggaatacgg cacggtttgc
    41281 tcataattgc tgccattaat gtcatcaata agcacatcct gaaaagttat ttcaatggtt
    41341 tgagcgttgc taatcgtgca gttaggcggc tgcactaaat aaccgtgaaa agagacgttt
    41401 gagagtgcca tcgagcaaaa gccccacagc aaaataagcg agatccgttt cattggtaat
    41461 ccaccacaat tgtggcactg gcgttaaatt cagctgccgc taacgttgta ccactctgtt
    41521 tcaccggcac agcttccaga acgggaactc ccgaggaaaa attaaatggc aaccatgagc
    41581 cagacgttaa gtcgagtatt gtgtgatcac tacttttctg aacccgaata ccaaacccag
    41641 gaatacccgt gctgataact gtttcaccgt taatcacgac cgttgtcgcc tgcatctgta
    41701 gacgcaggtc atccattgcc agattgttac aaacaagcga gtagtcaatg ggacgtttat
    41761 aatcaacccc attgatctta ttaatgaata cattaccaaa ctcaactgct gcgccattta
    41821 ccgtacaagg aggaggggca tcgacaagca cccgtaaatt catacttact gacttactcg
    41881 ctgcaactgc aaagccgcta ccaacacaac atatcagtaa cccagttacc gcccagacag
    41941 aacaagatcc tttcatactg gctctcccgg cctcagcctt tgcggctctg ctcttcatcg
    42001 acctggcaac tgttaccgtt gcaagtgaaa aagagcggca tccgagcgcc atagtcgttg
    42061 acataggtca gtaccggcac gctacccatc ttcacattca gcggtgcaga ggttttcggc
    42121 gacatcacta ttggcgagaa accggctgcc ggattgccat ttttctgtgt gctggcatta
    42181 ctgaaaatga cgtaatacgg cgtcgggtta ttgacggtaa attcctgacc gttgcgggtt
    42241 aaagtaacct tatattgcca ggggtttttc atgctgacgt tctccagcgc cttcggtcgc
    42301 cagaacaact taatacgcgt ttgtagtgct atttgcagcg tgttggcttt gtttgatttt
    42361 ggcgggatct cacgcacgtt gaagtagaac aggctttcac gatcggcagg caatttgttg
    42421 atatccggca ttccctgcac ttttacctgc ccgttcatca ttgaatcgat gcgttgcacc
    42481 ggtggcagaa cagttaacgg tgaactgatc ttgttaccct tttcatcttc gatccagctt
    42541 tgggccagat aaggcaattt cggatcgtta ttgcgcaacg tcacgctgat tgatttgtcg
    42601 ctttcattta atatcaaacg ggtacgatct ggcgttacag aagcctaggc agacaaactg
    42661 gcagcgctaa gcagtaacgc tagcgtcgta gcacccaatt tggcagagca aagtaaatca
    42721 gacatggatc attccttaat cacgttattg gttagctgaa acagaaacag ggggattggt
    42781 gggtgtcacc tgttgcgtct gctcctgaat gacaggcttt atgtcatcag gaacaaccgg
    42841 cgcgacattg cctttatgct ggcatggcag taacaagccg ttaaacagat cggcaggcag
    42901 cgggtccggc aggttgatat cgcaatgcgc aacaccactc cagaacacac tcatgtgttc
    42961 gccaggtttc accccagcca gataaacatt gccgtcatca tcgacaaggc ccactgtctg
    43021 ctcgttatca ttttttactt ctgcgccaaa cggaggatgg ctgccgtctt gtaaacgcag
    43081 caccgccatc gctttttgac cactgatgac ggcaaatttg cggtagccaa tcgccccttc
    43141 agttagcgtg gcttgtacca ccgactgggt tgcttcggcg ttttccggca gtttattgag
    43201 gtcgatatac gcctgattgc ggtaatagtt attgacgtca gaaacgacgg ctttaccaaa
    43261 catatttgta taaacagctg ccccgtgacc ttccaccgga acatcggcaa cgccatcggc
    43321 atcaatcaac aagcgtgtcc cgcccatatt ctgggtacgg tgaagtgcgc caccgtgggc
    43381 agtaagcgtt gcgccgccct gtaacgacaa gcccgcagag gtgtattgcc cttcatggta
    43441 gttcgcactg aggtcaacct gcgccagcga accatcatgg ctgtaatagc catcaacgct
    43501 ggtgtgtttg tcactggtgc cgacgttcaa ctgatagtga gtcgcgtcat cgacacggct
    43561 aaaataaccg acttggctgc tgtccgtccc actgccatag ttaccgttat agctaacggt
    43621 actgttgtca ccccacggca tactgagaga aatgtacata cccttatcct cccggttgtc
    43681 atactcgtaa cggtagccag tcatcgagat gctgacatta cgaatactgc ccatattgaa
    43741 atagtgcgag agcatgatgt tgtagtttgt ctgctcctcg cgatcccagt aggtatggcg
    43801 ggtatagttg agataaaccg aaacacccgc atcgcggaag ttctggttat aagtggcggt
    43861 gtacatctct ttgtcgttgc ccgtgcgtac cattccgctg tcactggcat ccagatactc
    43921 gctcatggtc ataaagttct cttccgagaa gcgatatcca gcaaaagtaa cgcggctgtt
    43981 gagctggtca aagtctttgg aataactcac acggaaggag ttaccgtcca gcgaaccttt
    44041 gccataagcg gtgtctttat ccagtttggt gtgcgagtga gtaacatcaa acgcgaccgc
    44101 gccgaatgta gacaaatcgc gaccgacgcc aagcgccgca gactgatagt tttcatctcc
    44161 cagtgcgccg ccatataacg accagccgtt agcgatcccc caggaagctt cagcaccaga
    44221 aaaaaattca ccctcgacat ggtgtcccca ctcttgcgga cggcccatca tgatcttata
    44281 gcgaacctga cctggacgag tgagatatgg catcgaggcg gtgctgatgt catattcctg
    44341 caactggccg ttctgttctt caatgcgaat atgcaacgta ccggagacag aatcaccaag
    44401 atcctgaata cgaaacggtc cagccggaac ctgcgtttcg taaatcacac gccccatctg
    44461 gctgacggtc acttttgctg tggtgtgtgc cacgccggaa atgtctggcg cgtagccgcg
    44521 cagattggga ggcaaccggt gctaacgctg ccaccaacat agttaaagcc atcaaaaata
    44581 tcggatctga ggtaatcctc gcccagcgcc agtttggctt ttaatgatgg taacgcccgc
    44641 caggcatagt agcgactcca ctcccatttt ttttgagttt catcgccgct gaattcatcg
    44701 tcatcatcat tactgcgagt atgttgatag ttagtctgcc agtcagcacg catacgccac
    44761 ggccccaggt taaccccgac cgtcccgttg ccgctgatct cgttactatc atcaccgcca
    44821 ttttcttcgt gccgggtttg tgcgttgatg ctgtagtccg cgacgatccc ggaaatgccg
    44881 tcatcccaac gtgaaggcgg atcccagtcg ggccaggtat attcgaggta agcctgcggt
    44941 agtgaaatga ctaatgcgga ctggcttaaa tcagccttaa tttccatgcc ttccagttga
    45001 ccggatttca ggcatttagc atcgtggctc cattgcagat ttttcgccac gtcttctttt
    45061 aaaccaaact gcgctaccag ttccggtgtt agacaagcat agcttttgct cgcgtcatct
    45121 tcaccagcat accagtaaat atcgtactct tccgccaatg gctgtttatt tagttgaacc
    45181 tgtaaattgt attttccggg ctcaacatat ccctggctgg aaaaacgctt cagatcaatt
    45241 tttgtgtcgc cttttaattc cagaaaacgg gaatcaaact gaatgtcgtc ttcagcccag
    45301 acactgctat aactccctga cattgccagc gcaatgcacc acggaagaat ccgtaatcga
    45361 aaaagagaat ggtcaggcat acacgtttct atccgttttt attcttgttc ggtcaaaatc
    45421 catttaaatc ccccatagca gtgtcgctat gggggtatgc cttacaggta agtaatctgg
    45481 aaggtggtat ttgcttcgaa attacccaga tctggcgcat cagttgcgcc gaccagccag
    45541 gctttaaagt tcagtgtctg cttcgctttg cctttgttgg tagaagtgtc tttcactatt
    45601 ttctggtcaa tacccatgcc gcttttgtaa gaggtaccca gagagtcacc gatcgccagg
    45661 ctaacattgt taaatgccgc accggtatcg gtattgaaaa tggtgtaata attgccgcta
    45721 tttgcagaag aaacggtacc agtaaaggta gtggtcattg tttcctgagt atcaaatacg
    45781 caatcttgca gacgaatctg gaaacttttc ggcgtggtgg tgccgttatt tttcagtttt
    45841 tcggcaccga tatcacccat atcaacttcc agtttgtgat cgtccggaac gatagaacac
    45901 actgagtctt caatggtgcc gtaaaaacgt gcagtaccgt tgttacccac agcgattgtt
    45961 gccgtagagg tgaacacgcc catcaccatt gccgcagcaa tagctgtttt aacaaactta
    46021 ctcattattt gtccttaaac tataaataat taaaaatata aacattgcaa tacattgatt
    46081 cagtcaatag ccaatgttta tacccagcca ttgaatacgg catgcgatcc aaaaagaaca
    46141 ggtcgtagaa aattgtattc gttggtgtgg ggccgcatag tgatgtttcc acacccctga
    46201 tgcaatttaa ttttactaaa gagtaaatgt agatttaatt aatatattga cagaagaaag
    46261 gttatcttaa ggacatcctt aaaaaatacg gaataagtat ttagaaaaaa tagaaagtat
    46321 atcaataatg aatatcaaca gcttaaaaaa caaacaatga acatataatg cgattggcat
    46381 ttatccactt ttgacaatat aatatataaa cactatagcc agaatttaat caagtttcaa
    46441 ttacatcctg cctgattatt caactctatt ttctctatta tctgtattaa taaatgacaa
    46501 tgagtgtcaa acagacatta ttcatttcaa catgtaactt tgggcaaaat caagatacgc
    46561 gcagaagaat aatttccgaa tgaatgtaga aagtgtttta tttatagata aggagagtct
    46621 tcgatagtag tgaggttgac agatatccgc tgcctgatga gcaattatgc ccaatgaatc
    46681 tacctcattg ggcataattt ggaacacatc agatagcttt tgccatcttc agattacacg
    46741 ggctcatctg ccagttgaat gtaccgtttc cgctttcatc aagcgttacg ctggcaatgg
    46801 ccgaggtggt aaacataggc ggcgtttcgc ccggacataa ctcggcaacc agatacccga
    46861 ctaacggtaa gtgagagatc accagtaccg aagcaacacc ttcattggtc aacgcctgca
    46921 aataggcact gaccagacca acatcgccgc agggcgttaa ctccggcaga acttctgcac
    46981 tggaaggcag gttcagacaa tcccctactt cttccagtgt ttgctcggct cgcaggaacg
    47041 ggctcaccag aacgcgttcg atttccactt tttgaccttt cagccagttc gccatcaggc
    47101 gagattcgtc acaaccatta gtggtcagag gacgaaccga atcactggcg gcatcgaggg
    47161 ctgcgtcgcc gtgacgcatg ataaaaactt gcatattgca ccgcttttgt taaccagatt
    47221 cgcccgtttt ctttcatctg aaaccagaga aagaaaacgg tggccggcat tgtgccttat
    47281 ccattcaccg aatgaaacgc tgttttttac ctcaatggcg taagtatagt caatatgcgt
    47341 ttacattttg accaacactc cgccattcag cgcggattca tatagctttg accttcttat
    47401 tgcaggtcag ttgcagttgt tttccaaaaa ctttccccac gcgcgcccat ctcgaccaaa
    47461 cgctcgcaag gggtaaaacg ggaaccatac tgcgtggcca gtcgttgcat tattgcaacc
    47521 acttcgcccg cgccgagaga atcgatatag cggaacggtc caccgagaaa tggcggaaaa
    47581 ccaatgccaa ataccgcacc aatatccccg tcacgcacgc tacggataac ctgctcatca
    47641 acacaacgta ctgcttcatt cagcatcaac atcacacacc gttcagcaac ctgcggtgcg
    47701 gagagtcgcc cctgcccttg tgcgccaatg agcgggtaaa tggcaggatc gacctgtttt
    47761 ttgcttttac gccctttctg accataaaga tagaaacccc gaccattttt tctgcctttg
    47821 cgatcgtcgt tcaaaattga agaaacaaca tttgcaggcg cgctaaaacg ttctccataa
    47881 gcggcttcca gtacaggaat aattttagtc ccggtgtcga ttcctacctc atccaaaagt
    47941 tggattgggc ctaccggaaa accaaatttc actagcgcag catcaatgtg ctctacccgt
    48001 tcaccttcgg tcagcatgcg gatagcttca ttaatgtaag gcgccaagat gcgattgacg
    48061 taaaacccgg ctttgtcacg cacgacaatg ggcgttttgc cctgtttttt cgccagtttt
    48121 accgtggtgg cgatggtttg cgccgatgta cctgcatgag gaataatctc caccagcggc
    48181 attttttcca ccggactgaa gaaatgcagg ccaataactt gctcaggtcg cgcggcgtga
    48241 gcggcgatat caccaatcgg taaagatgac gtgttcgaag caaaaatggt atgagcggcg
    48301 caattttgct ccacttccgc caccatctgt tgttttaatt cgagattttc aaacaccgct
    48361 tcaataatca gatcgcgatg ggcaaagccg cgatagtccg tcgttccgga aattaatgcc
    48421 agctgtttgt cacgttcgct ggctttgaga tgacgacggc gaactttgcc ctccagctga
    48481 tcccaactgt acttcagcgc atgatttatg ccctgcgggt tgatatcttt aattctgacc
    48541 ggaagccccg ctttacaagc agtgacataa gcaataccgc cgcccatcaa gccaccacct
    48601 aaaattccca cgctgtttaa tggcgcaggc ggcgcatcac taccgggatc tttcttcacg
    48661 tccgtactgg caaaaaagat actacgcaaa gcttgcgatt gcggcgtcat cgccagttcg
    48721 ccaaaggcgc gagcttcagc gtcatagccg ctgctggtgc cctgcgctaa tcccgtttca
    48781 acaacctcca ggatgcgttc tgtcgccgga taattgcctt gagttttgtg ttctgttttc
    48841 ttgccgacca ttttgaacag cagcgcacga cctaacggcc ccgccagaat acgctcgcgt
    48901 acaggtagag ggcgggaaga tggacgatcc ttcttcgcca gctcaacagc gacttccagc
    48961 aaaatggagt gcggaacaac gtcatccacc agccccagct ttaatgtctg tttcgcccga
    49021 agttgttttc cggtgagaat catctctaat gctgtactga cgcctatcag acgcggtaaa
    49081 cgctgggtgc cgcctgaacc gggtaacaat ccaagttgta cttcaggcaa accgagcacc
    49141 gttttaggat cgtcagtaca aacgcgaccg tggcacgcca gcgccaactc cagcccacca
    49201 cccaggcaag cgccatgaat agccgcgata accggaatgg gcaaagcatg aatctccgcc
    49261 atcaactgtt ggccctgccg cgccagagct tccgcttctt gcgccgtttt gcagttgccg
    49321 atcatgttga tgtctgctcc ggcgataaaa ttgtccggtt tcgcggagat aaacaccacg
    49381 ccgcgcaact ctttgttttc acggagttgc ttaataatgg cgcgcacctg cgaggcaaat
    49441 tccgccttca gggtattcat tttctcatcc ggtacgtcga tggtgatgat agcaatgttg
    49501 tccagacgaa cattaagagt aaacgctgat gccatttcca ttattccgcc tccagaacca
    49561 ttgccgcgcc aagcccaccg gcagcacagg cggtaactaa accaaatcca ccgccgcgac
    49621 ggcgaagttc atgcaatgtc tgggtaatca tccgcgcgcc ggtcgccgcg aagggatgcc
    49681 cgtaagcaat cgaaccgcca agcacgttaa atttgctatc gtccacttcg ccagtggcat
    49741 gtgcacgccc cagtacatca cgagcaaaac gttcactacc cagcaactga atattcgcca
    49801 gcgtctgagc tgcaaaggct tcgtgcatat cgatcaatgt cagatcgctc atcgtcaaac
    49861 cggcacgctc cagcgccagc ggtgttgacc aggctggacc gagcaacatg tcctgccaga
    49921 catcaatcgc agtaaatgcg tagctgcgca gataccccag cgacaccagc cctaattctt
    49981 tcgcccggga ttcagtcatc aggatcaccg ctgccgcgcc atcggtcagc ggcgtactgt
    50041 ttgccgccgt taccgttccg tgtttgcgat caaacgccgg gcgcagcttt gcgtaatcgg
    50101 caagcgagga attaccgcga atattgttgt cttcgacaag cggttgttta taaggaggga
    50161 taaaggcagt catcacctct tcttggagtt ttccgtctga ccatgcctga gcggcacgct
    50221 gatgcgaacg gtgcgctaat gcatcttgct gttctcgggt gatgccgtag gttttcgcca
    50281 tttgctctgc ggtgtcgccc atccgcaagc cggtagaata ttctgctacc gcaggtggta
    50341 cgggcattaa gtcgcgcaaa cgcaggcgag agaagagttt cagtcgctgg ctcatggttc
    50401 gagctttgtt gacatcaacc agcacgcgcg ccagtttttt actgacgcca attggcaata
    50461 cggaagagga atctgcccca ccggcaatcc ccgctcggat agttcccgcc atcaggcttt
    50521 ctgcgacgtt tgcaaccgcc tggaaactgg tagcgcaagc gcggctgacg ctgtaagcat
    50581 cggtatgcac attcattccg gtaccgagaa caatttcacg cgcaatgttg ggggcttcag
    50641 gcatttgtac gacctgacca aagaccagtt gttcaatcac ttcagcgggg atctcgctgc
    50701 gtgccagcag ttcgcctacc accatcttcc ctaaatcaac cgcgggaatg ccatgaaaag
    50761 ccgtcgcctg gcgggcaaaa ggcgtacgta aaccgctaac aatggcgata cgatcgccct
    50821 ggcgggtaac cagcggtaaa acctgaccca taacactccc ctgtaaaaaa taaataaagt
    50881 ggtctgacct gatcatagtc ttaaccattt ttttacattt agccaagcgg agaaaaagga
    50941 aagtgggagc tatgacacag tgaagacagg agaaagaaaa gaaaacgccc ctgccagcaa
    51001 ctgacagggg cgtacgtacc cgagaggaat taacgcagac ccagctggaa gatcagcatt
    51061 tcagcttcgc aggcaaaagt gaaatcgata tccaggcgca caccgtcaga ctcttcagtg
    51121 aaagtcgggg agattttgca cggttcggat tccacgctac gggctttttc agtcagcgcc
    51181 gccagcgttt gttctgcttc tgcgcggttt gcaaacacgc ggctgtaaga cgcggtgcag
    51241 tcggagttgt ccataatggt gccaacatcc atacagcagc aaaccggggt ttcatcagca
    51301 ctacatttac tcatcgttga tttcctctgt atgtgcaccc aaggtgccag ataaacgttg
    51361 tggatatttt acgcttccgg aaagtgctgc tccagttgtt aattctgcaa aatcggataa
    51421 gtgatcgaaa tcacacttaa aaatgatcta aaacaaaatt cacccgaatc cgcgagtgcg
    51481 caacctccaa attttgccag ttggatcgcg tttcttagat catatttgaa aaaagatgga
    51541 aacatacttg caacattcca gctggtccga cctatactct cgccactggt ctgatttcta
    51601 agttgtacct cagaccctac acttcgcgct cctgttacag cacgtaacat agtttgtata
    51661 aaaataaatc attgaggtta tggtcatgag ccagaaaacc ctgtttacaa agtctgctct
    51721 cgcagtcgca gtggcactta tctccaccca ggcctggtcg gcaggctttc agttaaacga
    51781 attttcttcc tctggcctgg gccgggctta ttcaggggaa ggcgcaattg ccgatgatgc
    51841 aggtaacgtt agccgtaacc ccgcattgat taccatgttt gaccgcccga cattttctgc
    51901 gggtgcggtt tatattgacc cggatgtaaa tatcagcgga acgtctccgt ctggtcgtag
    51961 cctgaaagcc gataacatcg cgcctacggc atgggttccg aacatgcact ttgttgcacc
    52021 gattaacgac caatttggtt ggggcgcttc tattacctct aactatggtc tggcaacaga
    52081 gtttaatgat acttatgcag gcggctctgt cgggggtaca actgaccttg aaaccatgaa
    52141 cctgaactta agcggtgcgt atcgcttaaa taatgcatgg agctttggtc ttggtttcaa
    52201 cgccgtctac gctcgcgcga aaattgaacg tttcgcaggc gatctggggc agttggttgc
    52261 tggtcagatt atgcaaactc ctcaagggca agcattggca gctaccgcca acggtatcga
    52321 cagtaatacc aaaatcgctc atctgaacgg taaccagtgg ggctttggct ggaacgccgg
    52381 aatcctgtat gaactggata aaaataaccg ctatgcactg acctaccgtt ctgaagtgaa
    52441 aattgacttc aaaggtaact acagcagcga tcttaatcgt gcgtttaata actacggttt
    52501 gccaattcct accgcgacag gtggcgcaac gcaatcgggt tatctgacgc tgaacctgcc
    52561 tgaaatgtgg gaagtgtcag gttataaccg tgttgatcca cagtgggcga ttcactatag
    52621 cctggcttac accagctgga gtcagttcca gcagctgaaa gcgacctcaa ccagtggcga
    52681 cacgctgttc cagaaacatg aaggctttaa agatgcttac cgcatcgcgt tgggtaccac
    52741 ttattactac gatgataact ggaccttccg taccggtatc gcctttgatg acagcccagt
    52801 tccggctcag aatcgttcta tctccattcc ggaccaggac cgtttctggc tgagtgcagg
    52861 tacgacttac gcatttaata aagatgcttc agtcgacgtt ggtgtttctt atatgcacgg
    52921 tcagagcgtg aaaattaacg aaggcccata ccagttcgag tctgaaggta aagcctggct
    52981 gttcggtact aactttaact acgcgttctg ataacacgtt cgcctggata aagtcacctg
    53041 catagcaggt gactttaact cccccacttc accgaaa
//
LOCUS       DAJVTL010000010        51629 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.010, whole genome shotgun sequence.
ACCESSION   DAJVTL010000010 DAJVTL010000000
VERSION     DAJVTL010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 51629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 51629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..51629
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.010"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            125..1681
                     /locus_tag="OQQ26_000584"
     CDS             125..1681
                     /locus_tag="OQQ26_000584"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HCS1856163.1"
                     /translation="MFIRSPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
                     TLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
                     KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
                     VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
                     GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSIRMRPGREIMTAIKREQ
                     FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
                     IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
                     MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINTIGTET
                     ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYRISRPLPLDDFVR
                     WLKKPYTPQW"
     gene            1763..3577
                     /locus_tag="OQQ26_000585"
     CDS             1763..3577
                     /locus_tag="OQQ26_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1856164.1"
                     /translation="MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFD
                     YVNPAAPKGGQITLSTLGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
                     AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSW
                     KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
                     AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPV
                     SKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQ
                     HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRLWRAMPWPSSDLQISWSSEYINST
                     YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
                     WDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE"
     gene            3578..4672
                     /locus_tag="OQQ26_000586"
     CDS             3578..4672
                     /locus_tag="OQQ26_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HCS1856165.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
                     YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
                     YNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
                     QKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWK
                     HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
                     YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
     gene            4672..5697
                     /locus_tag="OQQ26_000587"
     CDS             4672..5697
                     /locus_tag="OQQ26_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1856166.1"
                     /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
                     KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
                     TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
                     AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRNA
                     FDPNKAV"
     gene            5699..7288
                     /gene="yejF"
                     /locus_tag="OQQ26_000588"
     CDS             5699..7288
                     /gene="yejF"
                     /locus_tag="OQQ26_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708079.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HCS1856167.1"
                     /translation="MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
                     GSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
                     IVRKLAHRVAVMQNGRCVEQNNAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
                     DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
                     LITSQGSIVFDGQPLQDLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
                     EPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
                     PCARVFAAPQQEYTRQLLALS"
     gene            complement(7292..7636)
                     /locus_tag="OQQ26_000589"
     CDS             complement(7292..7636)
                     /locus_tag="OQQ26_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856168.1"
                     /translation="MTSLQLSIVHRLPQNFRWSAGFAGSKVEPIPQNGPCGDNSLVAL
                     KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNYNPF"
     gene            complement(7969..9141)
                     /gene="bcr"
                     /locus_tag="OQQ26_000590"
     CDS             complement(7969..9141)
                     /gene="bcr"
                     /locus_tag="OQQ26_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Bcr"
                     /protein_id="HCS1856169.1"
                     /translation="MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVILAQFGVSA
                     GSTQMTLSTYILGFALGQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALAQTIDQMI
                     VMRFFHGLAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLS
                     WHYIFWILAVAAILASAMIFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYML
                     ASGFSFAGMFSFLSAGPFVYIEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGA
                     LNMFRSGLWMAAWMVISALLGLGFWSLVVGVAAFVGCVSMVSSNAMAGILDEFPHMAG
                     TASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIAFCATSSILFCLYASRPKKR"
     gene            complement(9169..9864)
                     /gene="rsuA"
                     /locus_tag="OQQ26_000591"
     CDS             complement(9169..9864)
                     /gene="rsuA"
                     /locus_tag="OQQ26_000591"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HCS1856170.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
                     HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
                     TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
                     YRPLTEEEIASVV"
     gene            10014..11774
                     /locus_tag="OQQ26_000592"
     CDS             10014..11774
                     /locus_tag="OQQ26_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCS1856171.1"
                     /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
                     ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
                     NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
                     IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHSYLTPPERLDMPVVQYDFSRLQAQS
                     NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
                     AALITGDTPGAERDVLIENFKAQRFRYLVNVAVLTTGFDAPHIDLIAILRPTESVSLY
                     QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
                     FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
                     CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
                     RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
                     VREKVFDYEGRFRRAHELRG"
     gene            11899..12183
                     /gene="rplY"
                     /locus_tag="OQQ26_000593"
     CDS             11899..12183
                     /gene="rplY"
                     /locus_tag="OQQ26_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HCS1856172.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
                     DKVMNMQAKAEFYSKVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
     gene            complement(12322..13329)
                     /gene="yejK"
                     /locus_tag="OQQ26_000594"
     CDS             complement(12322..13329)
                     /gene="yejK"
                     /locus_tag="OQQ26_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HCS1856173.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
                     RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
                     VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTEFAAEKGYELEESFPADR
                     STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     N"
     gene            13511..13738
                     /locus_tag="OQQ26_000595"
     CDS             13511..13738
                     /locus_tag="OQQ26_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HCS1856174.1"
                     /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
                     INTSIAPAQRQAIANSFARALQSSINEDKAH"
     gene            13758..15518
                     /gene="pbgA"
                     /locus_tag="OQQ26_000596"
     CDS             13758..15518
                     /gene="pbgA"
                     /locus_tag="OQQ26_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HCS1856175.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
                     TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
                     RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
                     NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDDQTATQWINWLGRYAQEDNR
                     WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAG
                     RGIPLSEEEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
                     ASEYSQGQDLFNPQRRHYWVTAADNDMLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
                     KPQLSLLLQVLTDEKRFIAN"
     gene            15593..15669
                     /locus_tag="OQQ26_000597"
     tRNA            15593..15669
                     /locus_tag="OQQ26_000597"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15627..15629,aa:Pro,seq:ggg)
     gene            15879..17120
                     /locus_tag="OQQ26_000598"
     CDS             15879..17120
                     /locus_tag="OQQ26_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000101915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1856176.1"
                     /translation="MARKTTPLTITEIKNARPGEKEYTLQDGGGLFLLVKPSGSKIWR
                     FTYYRPADKKRTIISLGSLNDVSLSDARERRNEYRSLIAKGTDPQDYERRKREAESRK
                     KGNTFEKVASDWYEMKKGQNLAYNTIKDIWRSLEKYVFPYIGNTPIDTLTARRFVEIL
                     TPIKARGNLETLKRVLQRINEVMDFAANSGLIDINTAANVRKAFPSPTKKHMPTIRPE
                     QLPQLMHDLSVASIERQTRLLIEWQLLTVARPAEAAAARWEEIDLDAETWTIPAGRMK
                     MRRDHVIPLCGQAIAVLETMKPISAHREHVFPSLKNPMLPMSSQTANAALRRMGYAGV
                     LVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRSNYLEKRVVLMRWWGE
                     FVEAAATGVTIASGKRGIRAV"
     gene            17237..17479
                     /locus_tag="OQQ26_000599"
     CDS             17237..17479
                     /locus_tag="OQQ26_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000262088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856177.1"
                     /translation="MFFNEKVSPACGEGLQLALMANREFWSTYDPEDKSTAPTKHEVV
                     SFLRSRGASKNLAESIDKVLRPTSLKCGGRPKKWKR"
     gene            17650..17856
                     /locus_tag="OQQ26_000600"
     CDS             17650..17856
                     /locus_tag="OQQ26_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HCS1856178.1"
                     /translation="METIRKILTRQEVKNILRIKADSSLQDMINAGKFPKGFKIGLRR
                     VGWYEDEVLAWLKEREEEARGTAA"
     gene            17876..18913
                     /locus_tag="OQQ26_000601"
     CDS             17876..18913
                     /locus_tag="OQQ26_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001439643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HCS1856179.1"
                     /translation="MNITKSAPLPERPCEQLTCCEKNGSVQGNYINRVAKRHNCRITG
                     KTKATTKGSPVGTRENKSITNNATFAAGGQCNQSGSVRCHTCNERFSLYSLRNCSRAK
                     AHGANLSDSCSIFLRRLFRAGDNVLVNSLSVIVLPCIAMRRSYSHHGAGDGYSCSLAL
                     RRWRRLISPFAAVTKKPAVLSPGSLSCSISSITSCGILTVVICDFAFFAPVAISGSPK
                     NWCMSVYAKKMIKKGLKCISPVSKLKSKGEIHLKEQRPAVLATHAGRLTTNDNESIEV
                     AMRNYTRHPQGRDSYNLNKYIWRFIALSTAQPRVITIEATSEQEARQQSPDGCVMVFA
                     ARIRQGVRHVQ"
     gene            18903..19139
                     /locus_tag="OQQ26_000602"
     CDS             18903..19139
                     /locus_tag="OQQ26_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856180.1"
                     /translation="MCNNTRPDAAAEAIKTLMHALIDISVIADKAHKHATSETEYAGA
                     FVPHSLAVMQLSADMALNEAGKILTADIQGAHHA"
     gene            19132..19359
                     /locus_tag="OQQ26_000603"
     CDS             19132..19359
                     /locus_tag="OQQ26_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000543625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856181.1"
                     /translation="MHDDRYFKSMSHAENALTNSECLRQIFLIWLNGLSDAPEDERES
                     NLAGAFISLLDTVIVELNKAIEIHDKKINAE"
     gene            19365..19652
                     /locus_tag="OQQ26_000604"
     CDS             19365..19652
                     /locus_tag="OQQ26_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005765007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1856182.1"
                     /translation="MKNKNSGFTASGPARPEIRPGDIFRDNYGGTVTIKGVAERRITY
                     RRDGYEYDCVMPVYQFRRDFTLVGHRKAVNQKRAASHIRKIREMLVAGGKK"
     gene            19649..21463
                     /locus_tag="OQQ26_000605"
     CDS             19649..21463
                     /locus_tag="OQQ26_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000710169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCS1856183.1"
                     /translation="MKLAPNVKQQSRGIKHKETEVIIFAGSDAWSHAKQWQEHDARMA
                     GDNEPPVWLGEQQLSELDKLQIVPEGRKSVRIFRAGYLAPVMIKAIGQKLAAAGVQDA
                     NFYPEGMHGQEVQNWREYLARERQNLSDGLVIQLPVKKKTEDSAAPLALNQMGASQRG
                     EVLLAHYGGELAIHADSDTVHHYNGVVWEPIQDKELQRAMAQIFIDAEISYSQNAIKS
                     AVDTMKLSLPVMGNTARNLIGFSNGVFDTRTGNFREHNKNDWLLIASELPFSPPAEGE
                     TLATHAPNFWKWLRCSVAENDRKTDRVLAALFMVLANRYDWQLFIEVTGPGGSGKSVM
                     AEICTMLAGKANTVSASMKALEDARERALVVGFSLIIMPDMTRYAGDGAGIKAITGGD
                     KVAIDPKHKAPYSTRIQAVVLAVNNNAMSFSDRSGGISRRRVIFNFSEVVPENERDPM
                     LAEKIEGELAVVIRHLLTRFSDQDEAKRLLYEQQKSEEALVIKREGDSLVDFCGYLMS
                     SVMCDGLLVGNAEIIPFSPRRYLYHAYLAYMRAHGFGKPVTLTRFGKDMPGAMAEYGR
                     EYIKRKTKHGLRSNVTLTEDSEDWMPSCASVTNDDSKN"
     gene            21751..21996
                     /locus_tag="OQQ26_000606"
     CDS             21751..21996
                     /locus_tag="OQQ26_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856184.1"
                     /translation="MTTKHAKKPQSHALDLTEHWLRVAIKIIDRNAGEGYAKAHPELV
                     SAFMTTAAANFATLTEREIAEAEQVTTINVKTGEQTA"
     gene            21993..22415
                     /locus_tag="OQQ26_000607"
     CDS             21993..22415
                     /locus_tag="OQQ26_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001758993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HCS1856185.1"
                     /translation="MTAQIAAYGRLVADPQLKTTSKGTQMAMASMAVPLPCSQADDGT
                     ATMWLSVLAFGRQADALAKHHKGELVSVAGNMQVSQWTGQNGETRQGWQVIADSVISA
                     RTARPGGKKGQQGQATDALNRAKQQAGNDDPYGDNIPF"
     gene            22689..23729
                     /locus_tag="OQQ26_000608"
     CDS             22689..23729
                     /locus_tag="OQQ26_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HCS1856186.1"
                     /translation="MSDLYSPAMLIQVVNAEDIQWQINSLFINLFFKRVVTFETRDIA
                     LDIIDDPDIPMAAFCSPMVGSKVSRDEGYESKVIRPGYMKPKSSIDPNKIAVRQPGVS
                     PEQFNAYSSRSFKIKRALVRQAQAIRARIEWLAVQAVTTGKNIIEGDGIERYELDWNI
                     KPQNIITQSGGTEWSGRDLSTFDPNDDIEEYAEISEGTTNIIVMGRNVWKKYRAFKAV
                     KDCLDTRRGSNSVLETALKNLGDSVSFKGYVGDVAIVVYSGRYTDEDGKEKYFLDPDL
                     MVLGNTSLQGIVAYGGIQDPELIRMGLTKAELAPKNYIVPGDPAIEYVQTHSAPQPIP
                     ARINRFVTVRIG"
     gene            23739..24080
                     /locus_tag="OQQ26_000609"
     CDS             23739..24080
                     /locus_tag="OQQ26_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001710064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HCS1856187.1"
                     /translation="MATHYTELMAGTEALVTTLGIFSANKGVIPAFTPLMQEDATGAL
                     VVWDGTSAGKAVYVSAVQIDTATKTQAQVYKTGVLNVDALNWPESVTQLSAKVAAFVG
                     SGISVQPLARV"
     gene            24090..24434
                     /locus_tag="OQQ26_000610"
     CDS             24090..24434
                     /locus_tag="OQQ26_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HCS1856188.1"
                     /translation="MIERDSQLRELLDIDDKMSLSERLVDMDQVVELTTLSRRTLLNL
                     EARGEFPERVQVTKGRKAWYLSEVVAWINNIPRASNYCLVPTPEKPDAALCLKIERAR
                     RNALKGRNKLIG"
     gene            24502..24636
                     /locus_tag="OQQ26_000611"
     CDS             24502..24636
                     /locus_tag="OQQ26_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001383399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin--protein ligase"
                     /protein_id="HCS1856189.1"
                     /translation="MRFFAIYELFQGGGGGFVVCSISMNEKGKITPTHQPETLTKWGY
                     "
     gene            24636..25178
                     /locus_tag="OQQ26_000612"
     CDS             24636..25178
                     /locus_tag="OQQ26_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000835286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HCS1856190.1"
                     /translation="MKSHLMNKKTMAQSCRVSATAFDKWGVTPVERKGREAFYDVASV
                     IDNRVNNAINQLTNDKGEIDDDELLRVRIRLMTAQAEAQELKNERERGEVIDTKFCIY
                     AISKLAQQISSIMDSLPLTMQRRFPDIRPYMLDELKREIVKACNACARLDENLPQILA
                     DYLMETTGNVPEKLLQNKGE"
     gene            25252..25533
                     /locus_tag="OQQ26_000613"
     CDS             25252..25533
                     /locus_tag="OQQ26_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856191.1"
                     /translation="MTEAELLGLIRRVVGISQQHDEQATQPDSVTAENYVRVVAEVMR
                     RDGIELNGVDMRNIRTRVLELLAYRRRSQQRRESAKNTYQWKKPERLRR"
     gene            complement(26709..29306)
                     /gene="yejO"
                     /locus_tag="OQQ26_000614"
                     /pseudo
     CDS             complement(26709..29306)
                     /gene="yejO"
                     /locus_tag="OQQ26_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311108.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter YejO"
     gene            29626..30273
                     /gene="narP"
                     /locus_tag="OQQ26_000615"
     CDS             29626..30273
                     /gene="narP"
                     /locus_tag="OQQ26_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HCS1856192.1"
                     /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASA
                     IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
                     ADGYLLKDSDPEVLLEAIRAGAKGSKAFSERVNQYLREREMFGAEEDPFSVLTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
     gene            complement(30484..31536)
                     /gene="ccmH"
                     /locus_tag="OQQ26_000616"
     CDS             complement(30484..31536)
                     /gene="ccmH"
                     /locus_tag="OQQ26_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis thiol:disulfide
                     oxidoreductase CcmH"
                     /protein_id="HCS1856193.1"
                     /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
                     KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
                     LLWVLPVVAIGIGGWVIYARSRRRVLVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIV
                     AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
                     PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
                     LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPTNDTRRAVIE
                     RSIAQAMQHLSPQESK"
     gene            complement(31533..32090)
                     /gene="dsbE"
                     /locus_tag="OQQ26_000617"
     CDS             complement(31533..32090)
                     /gene="dsbE"
                     /locus_tag="OQQ26_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbE"
                     /protein_id="HCS1856194.1"
                     /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
                     VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
                     MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
                     GDLNPRVWGEEIKPLWEKYSKEAAQ"
     gene            complement(32087..34030)
                     /gene="ccmF"
                     /locus_tag="OQQ26_000618"
     CDS             complement(32087..34030)
                     /gene="ccmF"
                     /locus_tag="OQQ26_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis heme lyase CcmF"
                     /protein_id="HCS1856195.1"
                     /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
                     LLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATLGAHEGSLLLWVLL
                     MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
                     LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIF
                     LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWT
                     LLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARG
                     HKVRSRVNNALWSRESLLLANNVLLAAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
                     TMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVA
                     MTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFIQNYS
                     VERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKPETVLYAEKRY
                     YNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGG
                     LLCLFDPRYRKRVNPQKTAPEAV"
     gene            complement(34027..34506)
                     /gene="ccmE"
                     /locus_tag="OQQ26_000619"
     CDS             complement(34027..34506)
                     /gene="ccmE"
                     /locus_tag="OQQ26_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HCS1856196.1"
                     /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
                     YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL
                     FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
     gene            complement(34503..34712)
                     /gene="ccmD"
                     /locus_tag="OQQ26_000620"
     CDS             complement(34503..34712)
                     /gene="ccmD"
                     /locus_tag="OQQ26_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HCS1856197.1"
                     /translation="MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVMVVHSVMQHR
                     AILRGVAQQRAREARLRAAQQQEAA"
     gene            complement(34709..35446)
                     /gene="ccmC"
                     /locus_tag="OQQ26_000621"
     CDS             complement(34709..35446)
                     /gene="ccmC"
                     /locus_tag="OQQ26_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmC"
                     /protein_id="HCS1856198.1"
                     /translation="MWKTLHQLTIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
                     PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
                     FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
                     ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
                     MRMRNLILLMEKRRPWVSELILKRGRK"
     gene            complement(35488..36150)
                     /gene="ccmB"
                     /locus_tag="OQQ26_000622"
     CDS             complement(35488..36150)
                     /gene="ccmB"
                     /locus_tag="OQQ26_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HCS1856199.1"
                     /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
                     LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
                     VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVELKRGGVL
                     LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS
                     IQ"
     gene            complement(36147..36764)
                     /gene="ccmA"
                     /locus_tag="OQQ26_000623"
     CDS             complement(36147..36764)
                     /gene="ccmA"
                     /locus_tag="OQQ26_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HCS1856200.1"
                     /translation="MLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLL
                     RLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDG
                     DAAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVN
                     GVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA"
     gene            complement(36783..37385)
                     /gene="napC"
                     /locus_tag="OQQ26_000624"
     CDS             complement(36783..37385)
                     /gene="napC"
                     /locus_tag="OQQ26_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HCS1856201.1"
                     /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
                     KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
                     QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
     gene            complement(37395..37844)
                     /gene="napB"
                     /locus_tag="OQQ26_000625"
     CDS             complement(37395..37844)
                     /gene="napB"
                     /locus_tag="OQQ26_000625"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HCS1856202.1"
                     /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
                     GAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVENYRTTGAPRISP
                     THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
     gene            complement(37841..38704)
                     /gene="napH"
                     /locus_tag="OQQ26_000626"
     CDS             complement(37841..38704)
                     /gene="napH"
                     /locus_tag="OQQ26_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HCS1856203.1"
                     /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
                     FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
                     LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWI
                     NPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
                     AATDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
                     ITTRWSSGAKS"
     gene            complement(38691..39386)
                     /gene="napG"
                     /locus_tag="OQQ26_000627"
     CDS             complement(38691..39386)
                     /gene="napG"
                     /locus_tag="OQQ26_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HCS1856204.1"
                     /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
                     RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
                     EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
                     ITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
                     YRFGWQEGNNGKS"
     gene            complement(39393..41879)
                     /gene="napA"
                     /locus_tag="OQQ26_000628"
     CDS             complement(39393..41879)
                     /gene="napA"
                     /locus_tag="OQQ26_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HCS1856205.1"
                     /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
                     PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
                     RMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
                     KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
                     MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
                     QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
                     EYMLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
                     LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
                     GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
                     DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
                     RRFKTEEVWPEELLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
                     LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
                     GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
                     FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
                     QLVNKLTLDATDPLSKETDFKKCAVKLEKV"
     gene            complement(41876..42139)
                     /gene="napD"
                     /locus_tag="OQQ26_000629"
     CDS             complement(41876..42139)
                     /gene="napD"
                     /locus_tag="OQQ26_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HCS1856206.1"
                     /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
                     IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
     gene            complement(42129..42623)
                     /gene="napF"
                     /locus_tag="OQQ26_000630"
     CDS             complement(42129..42623)
                     /gene="napF"
                     /locus_tag="OQQ26_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HCS1856207.1"
                     /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI
                     NACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDAC
                     LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY
                     LHAH"
     gene            43031..43519
                     /gene="eco"
                     /locus_tag="OQQ26_000631"
     CDS             43031..43519
                     /gene="eco"
                     /locus_tag="OQQ26_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HCS1856208.1"
                     /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV
                     IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVS
                     TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAE
                     VR"
     gene            complement(43669..45315)
                     /gene="mqo"
                     /locus_tag="OQQ26_000632"
     CDS             complement(43669..45315)
                     /gene="mqo"
                     /locus_tag="OQQ26_000632"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HCS1856209.1"
                     /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA
                     TLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
                     EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL
                     QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS
                     LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL
                     QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD
                     GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML
                     SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDADKGGVLRLGTEVVSDQQGTIA
                     ALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE
                     LQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQKEVADIAL"
     gene            complement(45533..47176)
                     /gene="yojI"
                     /locus_tag="OQQ26_000633"
     CDS             complement(45533..47176)
                     /gene="yojI"
                     /locus_tag="OQQ26_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin J25 efflux ABC transporter YojI"
                     /protein_id="HCS1856210.1"
                     /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETA
                     DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT
                     IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLAGRKELTLNRERAEYVFNNLYIPDA
                     QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLTAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFAYQD
                     NTFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
                     EDYRKLFSAVFTDVWLFDQLLGPEGQPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
                     SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
     gene            complement(47252..47902)
                     /gene="alkB"
                     /locus_tag="OQQ26_000634"
     CDS             complement(47252..47902)
                     /gene="alkB"
                     /locus_tag="OQQ26_000634"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HCS1856211.1"
                     /translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS
                     PFRQMVTPGGYTMSGAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQR
                     AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDELDLRAPIVSVSLGLPAIFQFGGLK
                     RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTTDCRYNLTFRQAGKKE"
     gene            complement(47902..48966)
                     /gene="ada"
                     /locus_tag="OQQ26_000635"
                     /pseudo
     CDS             complement(47902..48966)
                     /gene="ada"
                     /locus_tag="OQQ26_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708108.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
     gene            complement(49040..50095)
                     /gene="apbE"
                     /locus_tag="OQQ26_000636"
     CDS             complement(49040..50095)
                     /gene="apbE"
                     /locus_tag="OQQ26_000636"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HCS1856212.1"
                     /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
                     FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
                     MADIVTTSLRIGTKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQH
                     LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR
                     GMNGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
                     TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
                     KTWMSPQFKSFLISEKN"
     gene            complement(50207..51313)
                     /gene="ompC"
                     /locus_tag="OQQ26_000637"
     CDS             complement(50207..51313)
                     /gene="ompC"
                     /locus_tag="OQQ26_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HCS1856213.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNKSEDGDQTYVRLGFKGETQVTDQLTGYGQWEYQIQGNTSEDNKENSWTRVAFAGL
                     KFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFG
                     LVDGLNFAVQYQGKNGSVSGEGMTNNGRGALRQNGDGVGGSITYDYEGFGIGAAVSSS
                     KRTDAQNTAAYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQN
                     FEAVAQYQFDFGLRPSVAYLQSKGKNLGVVAGRNYDDEDILKYVDVGATYYFNKNMST
                     YVDYKINLLDDNQFTRDAGIKTDNIVALGLVYQF"
BASE COUNT        13022 a        13568 c        12922 g        12117 t
ORIGIN      
        1 cttaggcagt gctttttgtt ttcattcatc agagaaaatg atgtttccgc gtcttgatcc
       61 aggctatagt ccggtcattg ttatctttta aatgttgtcg taatttcagg aaattaacgg
      121 aatcatgttc atacgctctc ccaattctgg acgtaagctc ctgcttacct gcattgtagc
      181 aggcgtgatg attgcgatac tggttagctg ccttcagttt ttagtggcct ggcataagca
      241 cgaagtcaaa tacgacacac tgattatcga cgtacaaaag tatctcgata cctattttgc
      301 cgacctgaaa tccactactg accggcttca gccgctgacc ttagatacct gccagcaggc
      361 taaccccgaa ctgaccgctc gcgcggcgtt tagcatgaat gtccgtacgt ttgtgctggt
      421 gaaagataaa aaaacattct gttcatctgc gactggtgag atggacattc cactcaatga
      481 attgattccg gcgctcgaca ttaataaaaa cgtcgatatg gcgatcttac ccggcacgcc
      541 gatggtgccg aacaaacccg caatcgtcat ctggtatcgc aaccctttgt tgaaaaatag
      601 cggtgtgttt gccgctctga atctcaacct gacgccttct ctcttttata gttcacggca
      661 ggaagattac gatggcgtcg ccctcattat tggcaatact gcgctatcta ccttttcttc
      721 acgtttgatg aacgttaacg aattaaccga catgccagtc cgtgaaacta aaattgcggg
      781 cattcctctg accgttcggc tttatgcaga tgactggaca tggaacgatg tgtggtacgc
      841 atttttactg ggcggcatga gtggaactgt cgttggcctg ctctgctatt acctgatgag
      901 catacgtatg cgccccggca gagaaatcat gaccgccatc aagcgcgaac aattttacgt
      961 ggcgtatcaa ccggtggtgg atacacaagc tttgcgagta acgggcctgg aagtactgct
     1021 acgctggcgg catcctgtcg cgggagaaat tcccccggat gccttcatta actttgccga
     1081 atcgcaaaag atgattgtgc cgctgactca gcacctgttt gagttaattg cccgcgatgc
     1141 cgcagaatta gaaaaagtgc tgccggtagg cgtcaaattt ggcattaaca ttgcgccgga
     1201 ccatctgcac agcgaaagct ttaaagcaga tatccagaaa ctgctcactt ccctacccgc
     1261 acaccatttc cagattgtgc tggaaattac cgagcgcgat atgctgaaag agcaagaagc
     1321 cacacaactc ttcgcctggc tgcactcggt cggcgtagaa attgctattg atgacttcgg
     1381 caccgggcac agcgcgctta tctatcttga gcgttttacg ctcgattatc tgaaaattga
     1441 ccgtggattt atcaacacca tcggtacgga aacgatcact tcacccgtac ttgacgcggt
     1501 gctgacgctg gcgaaacgcc tcaatatgct gacggttgct gaaggggtcg aaacgccgga
     1561 acaggcgcga tggctaagcg aacgcggcgt taatttcatg caaggctaca ggattagtcg
     1621 ccctttaccg ctggacgatt ttgtccgctg gctgaagaaa ccgtatacgc cgcagtggta
     1681 aggtgtgctt acgtccctta ttattcatag tgaaagcatg ccggattgcg gctaatgatg
     1741 agtaaaagga aatccgttgc agatgattgt gcgcatactg ctgctgttta tcgctctgtt
     1801 cacctttggt gtgcaggcgc aggctatcaa ggaaagctat gcctttgccg tgctgggcga
     1861 accccggtac gcgtttaatt tcaaccattt tgattatgtg aaccccgccg cgccaaaagg
     1921 tgggcagata acgttgtcaa ccctcggcac cttcgataat ttcaaccgct atgcactgcg
     1981 cggcaacccg ggcgcacgca ccgagcagtt gtacgacacg ctatttacga cttccgatga
     2041 cgaaccaggc agttattacc cgctgattgc tgaaagtgca cgctatgctg acgattattc
     2101 ctgggtggag gtcgctatta atccgcgcgc ccgttttcat gatggttcgc ccattactgc
     2161 ccgcgatgta gagtttactt ttcaaaaatt tatgaccgaa ggcgtgccgc aatttcgtct
     2221 ggtctacaaa ggcaccaccg tcaaagccat tgcaccgtta accgtgcgca ttgagttagc
     2281 taaacccggc aaagaagata tgctgagtct gttttcgctg ccggtatttc cagaaaagta
     2341 ctggaaggat cacaaactta gcgacccgct cgccacgcct ccgcttgcca gtggtccgta
     2401 ccgcgttacg tcctggaaaa tggggcaaaa tattgtctat tcccgtgtga aagattactg
     2461 ggcagcaaac ttaccggtaa accgtggacg ctggaatttc gacaccattc gctacgatta
     2521 ttacctcgat gataatgtcg cctttgaagc gtttaaagca ggtgcctttg atttgcgtat
     2581 ggaaaacgac gctaaaaact gggccacgcg ttataccggt aaaaatttcg ataaaaaata
     2641 catcatcaaa gatgagcaaa agaacgaatc agcccaggat acgcgctggc tggcgtttaa
     2701 tatccaacgt ccggtattca gcgatcgccg ggtccgggaa gcaatcactc tcgcctttga
     2761 ctttgaatgg atgaacaagg cgttgtttta caacgcctgg agtcgcacga acagttattt
     2821 tcagaatacc gaatacgcgg ccagaaatta ccccgacgcc gcggagctgg tgcttctggc
     2881 accaatgaaa aaagatctac cgccagaagt cttcacacaa atctaccagc cgccggtatc
     2941 taaaggcgat ggctacgatc gtgacaacct gttaaaagcc gacaaacttc tcaacgaagc
     3001 gggctgggtg ctgaagggtc agcaacgcgt taatgccaca acgggtcagc cgctcagctt
     3061 tgaattattg cttcccgcaa gcagcaatag tcagtgggta ttgccgttcc agcacagcct
     3121 gcaacggctg ggtatcaata tggacattcg caaggtggat aactcgcaaa tcactaaccg
     3181 catgcgcagt cgcgactatg acatgatgcc gcgcctatgg cgggcgatgc cgtggcccag
     3241 ttccgattta cagatttcct ggtcatcgga atatatcaat tccacttata atgcccccgg
     3301 cgtgcaaagc ccggttatcg actcgctgat caaccaaatt attgccgcgc agggaaataa
     3361 agaaaaatta ctgccgttgg ggcgagcact ggatcgcgta ttaacgtgga attattacat
     3421 gctgccaatg tggtacatgg cggaagaccg tctcgcctgg tgggataaat tctcccaacc
     3481 cgctgtacgc cctgtttaca gcctgggtat cgatacctgg tggtatgacg ttaataaagc
     3541 ggccaaactg ccgtcagcca gacaacaggg agagtagatg ggcgcttacc tgattcgccg
     3601 tctgttgctg gtgatcccaa cgttatgggc gattatcact atcaactttt tcatcgtgca
     3661 aattgcgcct ggcggtccgg tcgatcaggc catcgccgcc attgagtttg gtaatgccgg
     3721 agtattaccc ggcgcaggcg gtgaaggtgt tcgtgccagc catgcgcaaa cgggtgtcgg
     3781 caatatcagc gacagtaatt accgtggcgg acgcggatta gatccagaag tgatcgctga
     3841 gatcactcat cgctacggtt tcgataagcc gatccacgaa cgttacttca aaatgctctg
     3901 ggactacatc cgctttgatt ttggtgatag cctgtttcgc agcgcctcgg tgctgacgct
     3961 gattaaagac agtctgccgg tttccatcac cctcggattg tggagcacgc tgattatcta
     4021 tctggtgtcg attccgttag gcattcgcaa agctgtttat aatgggagcc gctttgacgt
     4081 ctggagtagc gcatttatca tcatcggcta cgccattccg gcctttttgt ttgccatcct
     4141 gctgattgtc ttcttcgcgg gcggcagcta tttcgacctg ttccctctac gcggcttggt
     4201 ttccgctaac tttgattcgc tgccgtggta tcagaaaatc accgattatc tgtggcatat
     4261 cacgctgccg gtgctggcga cagtgattgg tggctttgcg gcgctgacca tgctgaccaa
     4321 aaactcattc cttgatgaag tgcgcaagca atacgtggtg accgcgcgtg cgaaaggggt
     4381 aagtgaaaaa aatattctct ggaaacatgt gttccgcaac gccatgctgc tggtgattgc
     4441 cggttttccg gcgacgttta tcagcatgtt ttttaccggc tcactgctga ttgaagtgat
     4501 gttttcactc aatggccttg gcttactagg ctacgaagcg accgtctcgc gcgattatcc
     4561 tgtaatgttt ggtaccttgt atattttcac cctgattggc ctgctgctga atattgtcag
     4621 tgatatcagc tatacgctgg tcgatccgcg tatagatttt gagggacgtt aatgtcgcga
     4681 ctcagccccg tcaatcaggc ccgttgggcg cgttttcgcc ataaccgtcg cggctactgg
     4741 tcgttatgga ttttcctcgt tttgtttggt ttgagtttgt gttctgaact tatcgccaac
     4801 gataaaccgt tgctggtgcg ttatgacggc agttggtatt tcccgttatt gaaaaactac
     4861 agcgaaagcg attttggcgg cccgctggca agtcaggctg attatcagga cccgtggctg
     4921 aaacaacggc tggaaaataa cggctgggta ctgtgggcac cgattcgctt tggtgctacc
     4981 agtatcaact ttgctaccga taagcccttc ccttctccac cctcccggca aaactggctg
     5041 ggaacggatg ccaacggcgg cgatgtgctg gcacgcattc tctatggcac gcggatctcg
     5101 gttctgtttg gcctgatgct gactctctgt tccagcgtga tgggcgtgct ggcgggggcg
     5161 ctacaaggct attacggcgg taaagtcgat ctctggggac aacgctttat tgaagtatgg
     5221 tcggggatgc cgacgctgtt tttgattatt ttactttcca gcgtcgtaca gcctaacttc
     5281 tggtggttgc tggcaattac tgtcttgttt ggctggatga gtctggtcgg cgtggtgcgg
     5341 gcggagtttt tacgtacccg taatttcgac tacatccgcg cggcgcaggc gcttggcgtc
     5401 agcgatcgca gtatcatcct gcgtcatatg ttgccaaatg ccatggtcgc gaccctcacc
     5461 tttttaccgt ttattttatg tagttcgata accaccctga cctcactcga tttcctcggc
     5521 ttcggtcttc cgctcggttc accgtcactc ggtgaactgc tgttacaagg gaaaaataac
     5581 cttcaggccc catggcttgg gatcaccgcc ttcttgtcgg tggcgatatt gttgtctttg
     5641 ctgatcttta tcggtgaagc cgtccgcaac gcatttgatc ctaataaggc ggtgtagcat
     5701 gacgcaaact ctgttagcga ttgaaaattt gtcggtgggt tttcgccatc agcaaaccgt
     5761 acgtacagta gtcaatgatg tttcactaca gattgaggct ggcgaaacgc tggcgctggt
     5821 gggtgagtca ggttcaggca aaagcgttac cgcgctgtca attttacgcc tgctcccttc
     5881 cccgccggtt gaatatctct ccggcgatat tcgttttcat ggcgaatcgc tgcttcatgc
     5941 cagcgatcaa acgttgcgcg gtgtacgcgg taataagatc gccatgattt ttcaggaacc
     6001 gatggtgtcg ttaaatccat tgcataccct ggaaaaacag ctttatgaag tgctttcact
     6061 ccaccgcggg atgcgtcggg aagcggctcg tggcgaaatt cttaactgcc ttgatcgcgt
     6121 cggtatccgc caggcggcaa aacggctgac agattatccg catcagctct ccggcggcga
     6181 acgccagcgg gtgatgattg cgatggcgct gttaacgcga ccggaattat taattgccga
     6241 tgaaccgacc accgcactgg acgtctctgt ccaagcgcag attttacagc tgttgcgcga
     6301 actgcaaggc gagctgaata tgggcatgct gtttattact cataacctca gcattgtcag
     6361 aaaactggcc caccgcgtgg cggtaatgca aaacggtcgc tgtgtcgagc aaaataacgc
     6421 cgctacgcta tttgcctcac ccactcatcc ttacacacaa aagctactca acagtgaacc
     6481 gtcaggcgat ccggtaccgt tgccagaacc tgcctcaacg ttgctggatg ttgaacagct
     6541 tcaggttgcc ttccccattc gcaaagggat tttgaagcgc attgtggatc ataatgtggt
     6601 ggtgaaaaac atcagtttta cgctacgagc gggtgaaaca ctgggtttag tgggcgagtc
     6661 tggttccggg aaaagcacga cgggactggc gctgctgcga ctgattacct ctcagggcag
     6721 catcgtcttt gacggtcagc cactgcaaga tttaaatcgc cgccagttgt tacctattcg
     6781 tcatcgtatt caggtggtat ttcaggatcc aaactcctcg ctcaacccac gactcaacgt
     6841 tttgcagatt attgaggaag gcttacgggt tcaccagccg acgctttctg ccgcacaacg
     6901 cgaacaacaa gtgatagccg tgatgcatga agtgggatta gatcctgaaa cacgccaccg
     6961 ttatccggcg gagttctctg gtggtcagcg acaacgtatt gcgattgcca gggcattaat
     7021 tcttaagccc tcactgatca tacttgatga accgacatca tcactcgaca aaacggtaca
     7081 ggcgcaaata ttgacgctat tgaaatcatt gcaacaaaag catcaactgg cctatttgtt
     7141 tatcagccac gatttgcacg ttgtccgcgc gttatgtcat caggttatcg tactgcgaca
     7201 aggggaagta gtggaacaag gaccgtgcgc gcgcgtgttt gccgcaccgc agcaggagta
     7261 tacgcgtcag ctactggcgt tgagctgacg cttaaaaagg attgtagttt gaaaagggtt
     7321 cggcaattgc cacaccaaaa tttttcaatc ggcatgttgc agcaaactcg tcctggcgat
     7381 ttacaaacaa gcacggctca ccttcacact ctagcaccga acatggaact tcgatgtcgc
     7441 ttaacgcctg gcttagtttg tacatcaccg accatgcatt atcaccatcc gggctaagca
     7501 atttaagcgc caccaggctg ttgtcaccgc acggtccatt ttgcggaatc ggttcaacct
     7561 tcgaacctgc gaaaccagca gaccagcgaa agttctgcgg tagacgatgg acgattgaga
     7621 gttgtaatga agtcacttat tttccccgga agcacattta cttcacaatt tgtttacatt
     7681 aattttaaca catcatcaac aatccgtctt tatacagatc gtaaagattg atgcctcgcc
     7741 tgcgtggcct ctatggctct gatttaagta atatctgcgg gcgtggtcac gtttgcgggg
     7801 ctatatgtac ccgtttctgc gatctaactc aaccttttta actacaatga tgtgactttt
     7861 tacataaatt gattttacat aaaataaaca tatatcgggg gaatgataga tttgtggttg
     7921 acatgcatca acaaaggaag ccttttagct tcctcgttat gcaatagatc accgtttttt
     7981 cggtcgactg gcgtacagac agaagagaat ggagctggtt gcgcagaatg caattgacca
     8041 aatcatcggc catgcagagt taaaggtcgc aagagaaagc aatgcgccaa caattgcccc
     8101 tatgccaaaa cggaaggttc ctgccagcga agatgccgtt cccgccatat ggggaaactc
     8161 atcaagaatg cccgccatcg cattggatga caccatcgac acgcagccca caaacgccgc
     8221 aacgccaacc accagcgacc agaatcccag ccccagcagc gcactgatga ccatccacgc
     8281 tgccatccac aaccccgagc ggaacatatt taacgcgcca atacggcgaa cgaagcggct
     8341 gttaaagatg gtcatcacga acaggaaaac aatgtttagt gcaaagtaat aaccaaagtt
     8401 ttccggcgcg acgtggttaa tttcaatgta gacaaatggt ccggcgctca ggaacgagaa
     8461 cattccggca aagctgaaac cgctggccag catataactc aggacacgct tatgacggaa
     8521 cagcgccgca aagttaccaa tagtagtgcg aatgtgaaaa ggctggcgac gctccggtgg
     8581 taaggtttct ttgatcagaa agaagatcat tgccgaagcc agaatcgccg ccacggcgag
     8641 gatccagaag atgtaatgcc agctcagcca caccagcacc cagccgccaa ctatcggtgc
     8701 catcagcggt gcaatggtcg tcaccagcat gacaaacgac atcatccgcg agaactcttc
     8761 tttcgggtag atatcacgca tcaaagcgtt gataaccacg ctggccgcag ccagcccgtg
     8821 gaagaaacgc atcacaatca tctgatcgat ggtttgtgcc aacgcacacg ccaccgcggc
     8881 ggcggcaaac accagcgtac cgccaagaac caccggctta cgcccgaagc tgtctgccat
     8941 cggcccgtag attaactgcc ccaacgcaaa gcccagaata taagtactga gggtcatctg
     9001 cgtactgccc gccgatacgc caaactgcgc taaaattacc gggagcgcgg gcagatacat
     9061 atcaatcgac agcggcatca acatggccag caggccaagg ataaaaacaa tagcaaacga
     9121 cgaatgctgt cgggtggtca caacgggctc ctgaaagtca ttgaaaagtt agacgacgct
     9181 ggcaatttct tcttcagtta acggacgata ttcaccgggg gctaaatcag catccagcgt
     9241 aatgccgcca atacgttcac gatgcagctc aaccacatgg ttacccacgg cggcgaacat
     9301 acgtttcacc tgatgataac gcccttcgct gatggtcaga cgaacctgcg ttggggtaat
     9361 cacttccagc accgccggct tagtgagatc tttttcgtta tgcagctgca cgcctttagc
     9421 aaattgctct gccgtatcgt cagctacggg tgattccagc gtcaccagat aggtcttctc
     9481 gcaatgatgg cgcggagaag taatgcggtg cgaccactga ccatcatctg tcattagtac
     9541 cagaccggtg gtatcgatat ccagacgccc tgcggcgtgc agtttccacg ctaccggttc
     9601 atctagaaaa tagagcaccg ttgggtgatc agggtcgtcc gtggagcaaa catagccctg
     9661 aggcttattg agcatgaagt aacgtggacc gtgttgctgc gccagcgggt tgccatcgta
     9721 agcgacatca tgttcaggaa gcagtttgaa cgctgcatta cggacgattt cgccatcgac
     9781 ggtgacacga ttgccgcgga tttcacgccc ggcaatagca cggctaacgc cgagttgctg
     9841 tgcgataaat ttatcaagtc gcatgtgtgt gattttgcct gtaaaaaacg gaggtcgggt
     9901 aatgacccga atatctgaac tgttgtctgc ccagtatagc ggtctaataa catccctcaa
     9961 gggaaaaaga tccgtggcat actattagca gaataatcta cctacgcgag accatgattt
    10021 ttacacttcg cccatatcag caagaagccg tggatgccac gctcaaccat tttcgtcgtc
    10081 ataaaacccc tgccgttatc gtgctgccca ccggtgcagg taaaagcctg gtgatagcgg
    10141 agctggcgcg gctggcacgt ggtcgcgtgc tggtgctggc acacgttaaa gaactggtgg
    10201 cgcaaaacca tgcaaaatat caggcactgg gactggaagc cgatattttt gccgccgggc
    10261 taaagcgcaa agagagccac ggtaaagtgg tatttggcag tgtgcagtcg gtcgcccgta
    10321 atcttgatgc ctttcagggt gaattttcgc tgttgattgt cgatgaatgc caccgtattg
    10381 gtgacgatga agagagccag tatcagcaaa tcctcactca cctgacaaaa gtgaatcccc
    10441 acttacgcct gctggggctg actgccacgc cttttcgatt gggcaaaggc tggatctacc
    10501 agttccatta tcacggcatg gtacgcggcg atgagaaagc ccttttccgt gactgcattt
    10561 atgagctgcc cctgcgttat atgattaaac acagctatct gacgccgcca gaacgactgg
    10621 atatgccagt agtgcaatat gatttcagcc gcttgcaggc acagagcaac gggctgttca
    10681 gcgaagccga tctcaaccgt gagctgaaaa aacagcaacg tattaccccg cacatcatca
    10741 gccagattat ggagttcgcc gaaaagcgta aaggagtgat gattttcgcc gcgacggtcg
    10801 aacacgcaaa agagattgtg ggattactgc ctgccgaaga tgcagcactg attactggcg
    10861 acacccccgg cgctgagcgc gatgtgttaa ttgaaaattt taaagcccag cgttttcgct
    10921 atctggtcaa cgtcgcagta ctgaccaccg gatttgacgc cccgcacatc gatcttatcg
    10981 ccattctgcg ccctaccgaa tcagtgagtc tttaccaaca aattgtcggg cgcggtctgc
    11041 gtctcgctcc gggcaagact gattgtttaa ttcttgatta tgcgggtaat cctcacgatc
    11101 tctacgcgcc ggaagttggt acaccgaaag gcaaaagtga caacgttccg gtacaggttt
    11161 tctgccctgc ctgcggtttt gccaacacct tttgggggaa aacgaccgcc gacgggacat
    11221 tgattgaaca ctttggtcgc cgctgtcagg gatggtttga agatgacgac ggtcatcgcg
    11281 aacagtgtga cttccgtttc cgttttaaaa attgcccgca atgtaacgca gaaaatgata
    11341 ttgccgctcg ccgctgccgc gaatgtgaca cggtactggt tgatccggat gatatgttaa
    11401 aagcggcgct acgactgaaa gatgcgctgg tattacgctg tagcggcatg tctttgcagc
    11461 atgggcacga cgagaaaggc gaatggttga aaatcaccta ttacgatgaa gacggtgcgg
    11521 atgtgagtga gcgtttccgt ctgcaaacac ctgcccagcg taccgccttc gagcagcttt
    11581 ttatccgccc gcatacgcgc acaccgggca tcccgctgcg ctggatcacc gccgccgata
    11641 tcctcgccca gcaagcctta ttgcgacacc cggattttgt cgtcgcccgc atgaaaggcc
    11701 agtactggca ggtgcgtgaa aaagtgttcg attacgaagg tcgttttcgt cgggcgcacg
    11761 aattacgcgg ttaatggtag ttttgattga tgtataaggc gattgagtat agaatctcgc
    11821 ccgcttttgc atacgcaaag cagatcactt acctgttgct gggtcgcctg tagcaggatt
    11881 aatttaagag agaaagaaat gtttactatc aacgcagaag tacgtaaaga gcagggtaag
    11941 ggtgcgagcc gccgcctgcg tgccgctaac aagttcccgg caatcatcta cggtggcaaa
    12001 gaagcgccgc tggctatcga gctggatcac gacaaagtca tgaacatgca agctaaagct
    12061 gaattctaca gcaaagttct gaccatcgtt gttgacggta aagaaatcaa agttaaagct
    12121 caggacgtac agcgtcaccc gtacaaaccg aagctgcagc acatcgactt cgttcgcgct
    12181 taattgctga ataagttgta aaaaaccccg ctccggcggg gttttttgta tctgcagatt
    12241 atgcctgatt acggtattgc tattttttgc aggccagata aggcgttcac gccgcatctg
    12301 gcattcataa cacaaaaccg attaattgcc gccagacgtc cggcgctgca attggtcgcg
    12361 caaattcggc ggcgtgcctt taatggtcaa ggtatcggtt gctggatccc agaagatgcg
    12421 ttcacctaac agcatcgcat caaagttaat agtcaagcca ccgccgctac cggcaaactt
    12481 cgtcaactga cgcagtgtgc tacggtctgc cgggaagctc tcttccagtt cgtagccttt
    12541 ttcagccgca aactccgtga agctcacttc gcttacgcct gccagctctt tcgacagcga
    12601 ttccagttcg atctcttcgc ctgcctgcag ctgctcatta cagtagctat aaacctgctg
    12661 gcgcacgttc tgtcgctctg ctttatccag ttgtgcttcg gcagtgaaat catcaaccgc
    12721 ttgcaacagc ccacggtttt gcgctttcgc gtttaatcct tcgctggccc cgaggaaatc
    12781 cataaagaaa tccgccactt tgcgccctac tcgccctttc aggaaagtga gatagcgggt
    12841 cgactctgga ttggtttccc attcggttaa atcgatacgc gcaacaatat ccgcatgatt
    12901 gatatcaaga taatgggttg ggttgatgtc gagattttcg ttaacgcgca tactgctcag
    12961 gttgctcaga actgccacca gcaaatactc caccgccaga taacggtagt gacaaaacag
    13021 cacgaatcca ccgtcagcaa aaggatattt cgctaattcg tcacgcaggc gaccggttgc
    13081 cgcgcggcta aatgccagaa agtcctcttc gccctgacgc tgtaagcgca gcgtctgcgc
    13141 cagttcactc tcttcgctaa acaagccgta agctttattt ttggcgctat agacccgatg
    13201 cagttctgcc accatctcaa cgacggtttc tgtcggttcc agcaatgaat cgcgcaacac
    13261 cagctcaagg ttctgctcat cacgcttgat aagctggtgc agagcaatct ggttgatatc
    13321 cagactcatg ataaactctc ctttaagacc gggcggtatt caaccaccgc cggttaagcg
    13381 acgcaataaa agatggcggt cattttacag aaggcagcgt aacgagaatg atttaacgca
    13441 taaaaaagca gaaaaaaaac cgttgctacg gtaatatgtt gccctttcat caactaactg
    13501 atttcgattt atgccacaaa tttcccgcta cagtgatgaa caggttgaac aattgctcgc
    13561 agagctgctc aacgtactgg aaaaacataa ggctccgacc gacctttccc tgatggtgtt
    13621 aggcaacatg gtcactaacc ttatcaacac cagcattgcc ccggcccaac gccaggcaat
    13681 tgccaactct tttgcccgcg ccttacagtc ctctatcaac gaagacaaag cgcactaagg
    13741 gaaacagata acaggttatg gtaactcatc gtcagcgcta ccgtgaaaaa gtctcccaga
    13801 tggtcagttg ggggcactgg tttgcactgt tcaatattct gctttcgctc gtcattggca
    13861 gccgttacct gtttatcgcc gactggccga ccacgcttgc tggtcgcatt tattcctacg
    13921 taagcattat cggccatttc agcttcctgg tgttcgccac ctacttgctg atcctcttcc
    13981 cgctgacctt tatcgtcggc tcccagaggc tgatgaggtt tttgtccgtc attctggcaa
    14041 cggcgggaat gacgctatta ctgatcgata gcgaagtctt tactcgtttc catctccatc
    14101 ttaatcccat cgtctggcaa ctggttatca acccagacga aaatgagatg gcgcgcgact
    14161 ggcagctgat gttcatcagc gtgccggtta ttttattgct tgaactggtg tttgcgacgt
    14221 ggagctggca aaagctgcgc agcctgacgc gtcgtcgacg cttcgcgcgc ccgctggccg
    14281 cattcttatt tatcgccttt atcgcctcgc atgtggtgta tatctgggcc gatgccaact
    14341 tctatcgccc gatcaccatg cagcgcgcta acctgccgct ttcgtacccg atgacggcgc
    14401 gacgttttct tgagaagcat ggcctgcttg atgcgcagga gtatcaacgc cgtcttattg
    14461 agcaaggtaa tccagacgcc gtttccgttc agtatccgtt aagcgaactg cgctatcgcg
    14521 atatgggcac cgggcagaat gtgctgttga ttactgtcga tggcctgaac tactcacgct
    14581 tcgagaagca gatgcctgcg ctggcaggtt ttgctgagca aaatatttcg ttcacgcgcc
    14641 atatgagctc cggcaacact acagacaacg gcatctttgg cctgttctat ggcatctcgc
    14701 cgagctatat ggacggcatt ctgtcgaccc gtacgcctgc ggcattaatt actgcgctta
    14761 atcagcaagg ctatcagctg gggttattct catcagatgg ctttaccagc ccgctgtatc
    14821 gccaggcatt gttgtcagat ttctcgatgc cgagcgtacg cacccaatct gacgatcaga
    14881 ccgccacgca gtggatcaac tggctgggcc gctacgcaca agaagataac cgctggttct
    14941 cgtgggtttc tttcaatggc actaacattg acgacagcaa tcagcaggca tttgcacgga
    15001 aatatagccg ggcggcaggc aatgtcgatg accagatcaa ccgcgtgctc aatgcactgc
    15061 gtgattctgg caaactggac aatacggtag tgattatcac tgccggtcgg ggtattccac
    15121 tgagcgaaga ggaagaaacc tttgactggt cccacggtca tctgcaggtg ccattagtga
    15181 ttcactggcc aggcacgccg gcgcagcgta ttaatgctct gactgatcat accgatctga
    15241 tgacgacgct gatgcaacgc ctgctacatg tcagcacacc tgccagcgaa tattcgcaag
    15301 gtcaggattt gttcaaccct caacgccgtc attactgggt taccgcagcg gataacgata
    15361 tgctggcaat taccaccccg aaaaagacgc tggtgctgaa caataacggt aaataccgca
    15421 cttacaactt acgtggtgaa agagtgaaag atgaaaaacc acagttaagt ttgttattgc
    15481 aagtactgac agacgagaag cgttttatcg ctaactgatt aattataaat cagttagcaa
    15541 aatatcttac ttgcaatcgg tgtggaaaac ggtagtatta gcagccacga gtcggcacgt
    15601 agcgcagcct ggtagcgcac cgtcatgggg tgtcgggggt cggaggttca aatcctctcg
    15661 tgccgaccaa atcgaatatc ggacagcatc ggtaacctat tgaaagcccg ttaatttact
    15721 gattaactgg cttttttgtt gttttcagtc gccggattga atcggtaaga tagggttata
    15781 accggatttt ttagctacac gtttagctat acggtccagc gtgtagctaa agccgtatag
    15841 ctacgaccag gcatatagct accgatgagt aaaaaaacat ggcacgaaaa accaccccac
    15901 taactattac ggagatcaaa aacgcacgac caggggaaaa ggaatatacc ctgcaggatg
    15961 gcggaggatt atttcttctg gtgaagccct ccggatcaaa aatctggcgt tttacgtact
    16021 accgcccggc agataaaaaa cggactatta tcagccttgg atcgctaaat gatgtttccc
    16081 tgtctgatgc cagagagcga cggaatgaat acaggtcact catagcaaag ggaactgacc
    16141 cacaggacta cgaacgccgg aaacgtgaag cagagagcag gaaaaagggc aacacgttcg
    16201 aaaaagttgc ctcggactgg tacgagatga aaaaaggcca gaatctggct tacaacacga
    16261 ttaaggatat ctggcgatcc ctggaaaaat atgtattccc gtacatcgga aacacgccaa
    16321 tagataccct caccgctcgc cgctttgttg agatactcac acccattaaa gcacgcggca
    16381 acctggaaac tctgaaacgc gttttacaac gcatcaatga agtgatggat tttgctgcca
    16441 acagtgggct gattgacatc aacaccgccg cgaacgtccg caaggcattc ccttccccca
    16501 ctaaaaagca tatgccaacc atccgaccgg aacagctacc gcagctaatg cacgatttat
    16561 cggtcgccag catagaacgg caaaccagat tgctaatcga gtggcaactg ctgaccgtag
    16621 cacgcccagc cgaagcagcc gccgcacgct gggaagaaat agatctcgat gccgaaacat
    16681 ggacgattcc agccggacgc atgaagatgc gccgtgacca tgtgatccct ctttgcggtc
    16741 aggcgatagc tgtactggaa acaatgaagc caatcagcgc acacagggaa catgtttttc
    16801 ccagccttaa aaatccaatg ctgccaatga gcagccagac cgctaacgct gcattgcgcc
    16861 ggatgggata cgctggtgtg ctggtgtctc acggattacg cgccatattc agtacagcag
    16921 cgaacgagga aggattcgag ccggacgtaa tcgaggccgc actcgcacac gtggacacga
    16981 acgaggtaag gcgagcatat aaccgaagta actacctgga aaagcgcgtg gtgcttatgc
    17041 gctggtgggg ggaatttgta gaggccgcag ctaccggagt gaccatagcc agtggtaaaa
    17101 ggggtatccg tgccgtgtaa ctgtacaaaa aaccagtaaa agcgatgcaa accatgctaa
    17161 accatcgtat aatcgccaca acccacccaa tacagagagg agtcacccaa atcatgaaat
    17221 tcaaggagct atccaggtgt ttttcaatga aaaggtatcc cctgcttgcg gcgaagggct
    17281 gcaactggcg ttaatggcaa atcgtgaatt ctggtcaaca tacgatccgg aagacaaatc
    17341 aacagccccc acaaaacacg aggtagtcag ttttttgcgc tcgcgtggtg catcgaaaaa
    17401 tctggctgaa agcatcgaca aggtgctgag gcccaccagc cttaaatgcg gtgggcgacc
    17461 taagaagtgg aaacggtaat cacaatagcg gccctttgcg gtcgctattt ttttgcagaa
    17521 agaaaagcgt aatcaatgag ataaaaaaca gtggataccg ttttaaaacg gtgggtactg
    17581 tttttcccgc cctgccctgt tttaccgtat ttatcaccgg aatacgccgg attaacgagg
    17641 taaaacatag tggaaacaat cagaaaaata cttacccgtc aggaagtaaa aaatattctg
    17701 cgcatcaagg cagacagttc gctacaggac atgatcaacg ccggaaaatt cccgaaaggc
    17761 ttcaaaatcg gtctgcgtcg tgttggctgg tatgaagatg aagtgctggc ctggctgaaa
    17821 gagcgcgagg aagaagcgcg cggaacggct gcgtaatggt gtgaggcgta acgcgatgaa
    17881 cataacaaaa agcgccccgt tgccggagcg cccttgcgaa caattaacct gctgcgaaaa
    17941 aaatggatca gtgcagggga attatatcaa ccgtgtggcg aagcgccaca attgccggat
    18001 aacaggcaaa acaaaggcga ccacaaaagg gtcgccagtg ggaacaaggg aaaacaaaag
    18061 catcaccaac aatgccacat ttgcggctgg tgggcaatgc aatcagtctg gttcagttcg
    18121 ttgccatacc tgcaatgagc gcttttccct gtactcttta aggaattgct caagggcaaa
    18181 agcacatggc gcgaatcttt ctgattcatg ctctatcttt ctgcgccgtc ttttccgtgc
    18241 cggtgataat gttttggtca attctttatc ggtcattgtg ttgccctgca tagcaatgcg
    18301 ccgtagttac tcacaccacg gcgctggtga tggttactcc tgctctttgg ccttgcgacg
    18361 ctggcggcgt ttgatctcgc cttttgcggc agtaactaaa aaaccagcgg tactttcgcc
    18421 aggttcttta agttgctcaa tatcatccat tacttcatgt gggattctga cagttgtcat
    18481 ttgtgatttt gcgttctttg caccagttgc catttctgga tctcctaaaa attggtgtat
    18541 gtcagtatac gcaaaaaaaa tgataaaaaa aggcttgaag tgtatttcac cagtgagtaa
    18601 attaaaaagc aaaggtgaaa tacacctaaa agagcaacgc cccgcagtgc tcgcaacaca
    18661 tgcagggcgt ctaaccacca acgataacga gagtatcgag gtagctatga gaaattatac
    18721 cagacacccg caagggcggg actcgtacaa cctgaataaa tacatctggc gttttatcgc
    18781 cctgagcacg gcacaaccgc gcgtgattac cattgaggcc accagcgaac aggaagcgcg
    18841 tcagcaatct cctgatggct gcgtgatggt attcgctgcc cgtattcgtc agggggtacg
    18901 ccatgtgcaa taacacccgt ccggacgcag ccgccgaagc catcaaaacg ctgatgcacg
    18961 cgctgattga tatttctgtt atcgcagaca aggcgcataa gcacgccacc agcgaaacag
    19021 aatatgccgg ggctttcgtt cctcactcac tggctgttat gcaacttagt gctgatatgg
    19081 cgctgaatga ggcaggcaaa attcttaccg cagatattca aggggcgcac catgcatgat
    19141 gaccgttatt ttaaatcaat gagccatgca gaaaacgcac tgactaacag tgaatgtttg
    19201 aggcaaatat ttcttatctg gcttaatggt ttaagtgatg cgccggaaga tgagcgtgag
    19261 tctaatcttg ctggtgcgtt tatttcatta ctcgatacgg taatcgtcga attaaataaa
    19321 gcgatcgaaa ttcacgataa aaaaataaac gcggaataaa aaccatgaaa aataaaaatt
    19381 ctggctttac tgccagcggc cccgctcggc ctgaaatccg ccccggcgat attttccggg
    19441 ataactatgg cggcacggta acgataaaag gcgtggcaga acggcgcatc acttaccgcc
    19501 gtgatggcta cgaatatgac tgcgtgatgc ctgtttatca gttccggcgt gatttcacgc
    19561 tggtgggcca tcgtaaagcc gtaaatcaga aacgtgcagc aagtcatatc cgcaaaattc
    19621 gtgaaatgct ggtcgcaggg ggtaaaaaat gaaactggca ccgaacgtaa aacagcagtc
    19681 acgcggcata aaacacaaag aaacagaagt cattattttt gcgggtagtg atgcctggtc
    19741 acacgcaaaa caatggcagg aacatgacgc gcgtatggcc ggagataatg agcctcctgt
    19801 gtggcttggg gagcagcagt tatccgaact ggataagctg caaattgtgc cggaaggcag
    19861 aaaatccgtg cgcatattca gggccggata tcttgcgcca gtaatgataa aggcgattgg
    19921 tcagaagctg gcggcggcag gcgtacagga tgcaaatttt tatcctgagg gtatgcacgg
    19981 ccaggaggtg cagaactggc gcgaatatct ggcccgtgag cgccagaatc tttctgatgg
    20041 tctggtgatt cagcttcctg ttaagaaaaa aacagaagac agcgccgcac cactggcgct
    20101 taaccagatg ggagcaagcc agcgcggcga agttctcctg gcacattatg gcggtgaact
    20161 ggcgattcat gccgactctg acactgttca ccattacaac ggcgttgtat gggagccgat
    20221 tcaggataaa gagttacagc gtgctatggc gcagattttc attgatgcgg agatcagcta
    20281 ttcgcagaac gccattaaat cggcggtcga taccatgaag ttaagtttgc ctgtaatggg
    20341 gaatacagcc cgtaacctga ttggattcag taacggggta tttgatacca gaacaggtaa
    20401 ttttcgggag cataacaaaa acgactggtt gttaattgcc agtgaattac ctttcagccc
    20461 accagcagag ggggaaacgc tggcaacaca tgcgccgaat ttctggaagt ggttacgctg
    20521 ctcggtggca gagaatgacc gcaagacgga tcgcgtgctg gctgcattat tcatggtgct
    20581 ggcgaaccgg tacgactggc agttattcat tgaggtaaca ggtccagggg gaagtggtaa
    20641 aagcgtgatg gcggagattt gcaccatgct ggcgggtaag gccaacacag tatcggcaag
    20701 catgaaggcg ctggaagatg caagggaacg cgcgttagtg gttggctttt cgctgattat
    20761 catgccggat atgacccgct acgctggtga tggcgcagga attaaggcca ttacaggcgg
    20821 tgacaaggtg gcaatcgacc cgaagcataa agccccctac tcaacacgca ttcaggcggt
    20881 cgtgctggcg gtgaacaata acgccatgtc attcagtgac cgcagcgggg ggatctcacg
    20941 tcgtcgggtg atattcaatt tttcggaggt tgtaccggag aacgagcgcg accccatgct
    21001 ggcagaaaaa atagaaggag agctggcggt tgtgattcgc catctgctta ctcgtttttc
    21061 tgaccaggac gaagctaaac gcctgctgta tgagcagcag aaatcagaag aagctctggt
    21121 gataaaacgc gagggcgatt cgctggtgga cttctgtggc tatctcatgt cgtcggtaat
    21181 gtgtgatggt ctgttagtgg gtaatgccga aattattccg ttcagtccgc gcaggtatct
    21241 ttatcacgcc tatctggcat atatgagggc acacggattc ggtaaacctg taacactgac
    21301 gcgcttcggt aaagatatgc cgggggcaat ggcggaatat ggcagggagt atataaaacg
    21361 gaaaacgaag cacggtttgc gttcaaatgt gacactgaca gaggattcag aagactggat
    21421 gccatcatgt gcatcggtca caaatgacga cagcaaaaat taaacttatg gaataactgt
    21481 tcaccactgt tcaccctgtt ataaatatct tttatatcag tacattatag ggtgaacagt
    21541 tatttgtgaa ctgttcacca aactattcac tgttcacctt tttgattatt tattgagctt
    21601 taagggtgaa cagtggtgaa cagttggtga atagtttttg tgaaactgtt caccccttaa
    21661 cattatgaat aaaaagggaa aatctcaaaa ggtgaacagg tgaagggtta aaatgcaaaa
    21721 attttatttt attgctgtga ggtaaagcct gtgacaacga agcacgcaaa aaaaccacaa
    21781 tctcacgccc ttgatttgac agaacactgg ctgagggtgg cgataaaaat catcgaccgc
    21841 aacgcgggag aagggtacgc aaaagcacat cccgaactgg taagcgcatt catgaccacg
    21901 gcagcggcaa actttgccac gctgacagaa cgggagattg ccgaagcgga acaggtgaca
    21961 accatcaacg ttaaaaccgg agagcagaca gcatgacagc acagatagcg gcttacgggc
    22021 ggctggtggc tgacccgcag ttaaagacca ccagcaaagg gacacaaatg gcgatggcga
    22081 gtatggcggt tcccctgccg tgcagccagg cagatgacgg aacggcgacg atgtggttat
    22141 ctgtcctggc gtttggcaga caggccgacg cactggcaaa acaccacaaa ggcgaactgg
    22201 tgagcgtggc gggtaacatg caggtgagcc agtggacagg ccagaacggg gaaacgcggc
    22261 agggctggca ggttattgca gacagcgtaa tcagtgcgcg aacggcgcga ccgggcggca
    22321 aaaaaggtca acagggccag gctactgacg cgctgaacag ggcaaaacaa caggcgggaa
    22381 atgatgatcc gtacggggat aacataccgt tttaagcaac gagtaacaga ggccggagca
    22441 atccggcttt tatcagttga gtccgtcaca ctacgcaaaa aaaaaggccg gaatattccg
    22501 accctttcat caccaaagag aataatttat gtctttgaac ttgtaacgct gtacagaatg
    22561 acacgtaacg ccggataaat aaacgaagat tgaaactttg cacactattg catagcaatg
    22621 cataaagatg ccaaacaagg cagatgataa aattaacgcg acacttttac taagtattaa
    22681 gaggttatat gagtgattta tattcgccag ccatgttaat acaggttgtt aatgccgaag
    22741 atattcaatg gcagattaat tctttattta taaacctgtt ttttaagcga gtcgttacat
    22801 ttgagacgcg ggatattgcg cttgatatta ttgacgatcc agacatcccg atggctgcat
    22861 tttgttcccc tatggttggt agtaaagtct cacgcgatga aggctacgaa tcaaaagtaa
    22921 ttcgccctgg ctatatgaag ccaaaaagta gtatcgaccc aaataaaata gccgttcgtc
    22981 aaccaggcgt atcacctgaa caattcaatg catattcatc acgcagtttc aaaataaagc
    23041 gagcgttagt aagacaagcg caggcaattc gtgcgcgtat tgagtggctt gctgttcagg
    23101 cggttacaac ggggaaaaat atcattgaag gcgatggaat tgaacgttat gaactggact
    23161 ggaatataaa accacaaaat attatcacgc agtccggcgg cacggagtgg agcggtagag
    23221 atttatcaac atttgatcca aacgatgaca tcgaagagta cgcagaaatc agcgaaggta
    23281 ctacaaatat catcgtaatg ggccgcaacg tatggaaaaa ataccgcgcc tttaaagcag
    23341 taaaagattg ccttgatact cgacggggat ctaattccgt tcttgaaacg gccctgaaaa
    23401 atcttgggga ttctgtaagc ttcaagggtt acgttggcga tgttgctatt gtggtatata
    23461 gcggacgtta taccgacgag gacggcaaag aaaaatattt ccttgatcct gatttgatgg
    23521 tgcttggcaa cacatcatta cagggcatcg ttgcctacgg tggcattcag gatcctgagt
    23581 taatcagaat ggggctgact aaagccgaac ttgcgccgaa aaattacatc gtaccaggtg
    23641 atccggctat tgaatatgtg cagacgcaca gcgcaccgca accaataccg gcccgcatca
    23701 atcgttttgt taccgttcgc attggttaag ggggagcaat ggctactcat tacactgaac
    23761 tcatggctgg cactgaagca ctggttacta cgttggggat attttcagct aataaagggg
    23821 taattcctgc atttacgcca ctgatgcaag aagatgcaac tggtgcactg gtggtatggg
    23881 atggaacgag cgcaggcaaa gctgtttatg tttccgctgt acaaatcgat acagcgacaa
    23941 aaacgcaggc tcaggtttat aaaaccggcg tcttaaatgt tgatgctctg aactggcctg
    24001 agtctgtaac acaactatca gcaaaagttg ctgcgtttgt tggctcaggt atttctgttc
    24061 agccgctggc acgtgtgtga ggtacgagaa tgattgaaag agatagtcag ctacgagagc
    24121 tattagatat cgatgacaaa atgagtttaa gcgagcgcct tgttgatatg gatcaggtag
    24181 tggagcttac aacccttagc cgtcgcacat tgctaaacct tgaggctcgc ggagagttcc
    24241 ccgaacgcgt acaggttacg aaagggcgca aggcatggta tttaagcgag gttgttgcgt
    24301 ggattaacaa cattccgcgc gcatcaaatt attgccttgt tcccaccccc gaaaaacctg
    24361 atgcggcgtt atgcctcaag attgaacgcg ccaggcgtaa tgccctgaaa ggacgcaata
    24421 agttgattgg ttgatgaaat tagggcccgt tctggctggc gggtcctttc cggcgatccg
    24481 gcaggctacg gggcggcgac cttgcggttt ttcgctattt atgagctttt tcagggtggt
    24541 ggtggtggtt ttgttgtttg ttctatctcc atgaatgaaa agggaaagat aacaccaaca
    24601 caccaacctg aaaccttaac taagtgggga tattgatgaa atcgcacctg atgaacaaaa
    24661 aaactatggc gcaaagctgc cgcgtaagtg cgacagcgtt cgacaagtgg ggagtgactc
    24721 ccgttgagcg taaaggccgt gaggcgtttt atgatgttgc tagcgtgata gacaataggg
    24781 ttaacaatgc aattaaccaa cttacaaacg acaaaggcga gattgatgat gatgaacttt
    24841 tacgcgtaag aatcagatta atgacggccc aggcggaagc gcaggaactt aaaaacgagc
    24901 gcgaacgcgg cgaggtgatt gatacaaagt tttgcatcta cgcgatttca aagctggcac
    24961 aacaaatttc ttcaatcatg gacagcctcc cgctcacaat gcaaaggcgc tttcccgata
    25021 taaggccgta tatgctggat gaactaaaaa gggaaatagt caaagcatgt aacgcatgtg
    25081 caagacttga cgaaaacctg ccacagatac tggctgatta cctgatggaa actaccggaa
    25141 acgtgcctga gaagttgcta cagaacaaag gcgagtaacc gccgccccgt aacgggccat
    25201 aattccagga aggacccgac gacaccaggc tatcagaacg atgagggcac aatgactgaa
    25261 gccgaactac tgggattaat ccgccgcgtc gtcggaatca gccagcagca tgacgaacag
    25321 gccacacagc cggacagcgt gaccgctgaa aattatgtgc gtgttgttgc tgaggtgatg
    25381 cgccgtgatg gtattgagct taacggcgtg gatatgcgca acatacgaac aagagtcctt
    25441 gagttgctgg cataccgtcg ccgttctcaa caacggaggg agagcgcgaa aaatacttac
    25501 cagtggaaga agccggaacg gttgcggcgg tagattcctg atattcagga aaaccacgaa
    25561 tctgtggggt ttactggcgc ggttacggcg gtgacacgca ccgaggcaga acaattaccg
    25621 taggttaaag cgacagtatt cacaccaaag gcagaaatta gcggttaacg taactgactg
    25681 atattttcgg gaacagccaa cggctgaggc cggagctata aaaatagctt tgggtacagt
    25741 cctcagtttt gagggatgtt aaccaactga ataataagca aacctcaaaa ttgagttttg
    25801 tatctgcctg agttatttct gtgctaactt gctgatattc ccgataacgt aaaattgcgt
    25861 tggctggcag agtgcaaatt tgcacgatgg cctaacccat tgattgtttc ggaaacctca
    25921 atttgaggag gccggacagc gtgacggagg gtgacaacca gtgacacgcc gtgacaaaaa
    25981 gacggtttaa ccatccatta aaaatcgacg tgattttgta ctttccgtat gaggtggcca
    26041 gcgtcatttt ttagtgagaa attctggtca ggggcgttgg ctgaatggtt attttatcgt
    26101 gcccatgcac agggaggggg cgggtaaaat ctctggaggt gatgcctgtc aggaccgccg
    26161 cctgaccctt cctcacatcg ccgcaggttc gaaaactttt tttgtgtcag gtgcgcacgg
    26221 aattgatagg taaaacctat attaaaaaat cacggaagcc gcgccattgc tggatcagtc
    26281 aaaaattcca catctcacgg caggcaaaaa aagcgaattt tgggccagtt gaggataaaa
    26341 aagggctcac tagttttgca catcctggta tcggggtcgt cagcctcccg ccagtaacca
    26401 ggtaactaat cacgctggtg ggcatgatgc cgatgccggg atctcggtat cggtttatct
    26461 gtgatcatcc accagcttga tgacagataa cagggagtca taacgattaa aattgtatat
    26521 ttttgcagca aacattttta gctacacgtt aagctatacg attttgagtt taaatttttt
    26581 gtattcaatt aaatcaaatg gttatatgca cgttttgaat actctcgtgc cttacggttg
    26641 gttttttata tctgcaatta attcgataaa cagaccgtga cacatcacag cctgtttatt
    26701 ttctgttatc agaacgtcca gaccacaccc gcctgagtat tccacggcga ttctacccct
    26761 gcgccattgc catagctgac tgacaaatga ccgcttaacg tcggggtaaa cgatgacctt
    26821 atcccagcct gataaacgcc acgggttcca gccacatcat tattaaattt gccatcgtca
    26881 ttaactttca cctggttaga atcggcgtat tcctgacgca cggcggcttt cagccaaggt
    26941 tccagcgtcg taccgttttg caggtccatg tgatagctta ccgccgttcc cgcttcagcg
    27001 cgtaatatcc gggtatttcc cacatccgcg cgcatgccgt ttgataacgt gtagtcctga
    27061 ccatctgtgg taaagccggt aaaggccaga tagggtctaa cactccacaa tccgtcaccc
    27121 caacggaacc cgctctcgac atgagcaccc gcgccgttac tactgtaatc gccaaacgct
    27181 gttgccccat tactcatctt gccatggatg gtgttggcaa aacggtcaac tttcaccact
    27241 ccatcaacat aggcaccgtt ctgatgctcc caaccggcat aagcccccag ggtatagcta
    27301 tcgatattac ctttgccgcc gcgatcaaaa ccaatatcag aatgagagta accaaagaac
    27361 aagccgcgaa ttgtgctgct ttcttcacgg gagaaacggc tatcgatacc gagcgtcagg
    27421 cccgtcaatg tttgctcaaa gccagctccc gcttcagtgg tcacgttgtt gcgggtgtta
    27481 attgccgaac tccacatcgc cgtatcgtaa ttaacgcctt ttacgctacc aagacgctca
    27541 cgcacggtgt ccagttctgc atcaaatacc agcggttgtg ctgctgccat gttcagcaca
    27601 tcagtggttg aaggggtaat ttgcgcgcga ttctctgcga ggctccagct atggttgcca
    27661 ttatccagca aggtatattc atacgtaccg atatcaacaa cgcctccggc attgcccaac
    27721 gtaaatgcag catcaccgcc gcccgttgtt accagtgtaa ggctatctcc tgctgccggg
    27781 ctggcaccgg tgtccgtcac gaatattttg aaatcacctg ttgcctgacc ggtgacgttg
    27841 agctgatcgc tctgatgatt ggccatatcg gtacgcatat aaaaattgcc gtttcccgac
    27901 agggtattgg tggtcaacgt aatgaaattt tccgcacttg ccgtcacaga tgaacgagtc
    27961 actggctcag ccatcataat cacatttgcg ccggacatcg caaggttggc taagttgagg
    28021 cgagtgtttt ggttcgtcgt agtgatatcg gcaatgatgg tccatgcgct attttcgagc
    28081 gaaacgtccg ctttgctggt atccacggca ccatgcgttc taaaagaagc gccctcagaa
    28141 accactacct tacccaccaa catagcgggt gcataattta tttgcggctt catgacctca
    28201 agaatgccat cattccctct gactgacacg ttaaccattg tgccaaccca gacattagcg
    28261 cggccattgt tgattaccat attttcagag atggcttttg aggaatacgt gatacttcca
    28321 ttctggtctg atcgaccgag atcatatacc gcatttgcct gcactttcgt accagtatcc
    28381 tttcccagcg attgcatagt ggcatgctca tcaaggatag tgtcaatggc ctgcgtgtcc
    28441 tccataacaa tgagcccgga accatcatcc agttcataat tttttgacac accatccttt
    28501 atactaaatt ggcctttact gtttgtacca ctcacttcca gcgcattcgt tgagacaatt
    28561 aatttcccgc ctgctttttt atcaacgcca gttgcagtcc cgctatccat aacctccagt
    28621 aagccgccac tatccacagt agtattataa gcgaagtcat tttcttcaac tcgcaaactt
    28681 ccgccgtttt ccaacaacat attattagca ataccattct tgatatcgaa ctgaccgaga
    28741 cggtttgttc cgaatacctc catggcccgc gtggttgttt taatagcacc gcctgctttc
    28801 tgatctaccg caagcgcaaa tcccccctct ttaacctcca gtagtcctcc cttttcgata
    28861 gcggcaaaaa cggtccccca tctttttcaa cgattaagcg cccgccttta atcgtggtat
    28921 cattcgctgc gccataaacc tgtagcacac cattattgag ggtagtctgg tttgccgcgc
    28981 cacccatttg aacaatttga taaccatcat ttaatactga gtattctgtg gtaccattca
    29041 tttcaatgta ttgatacctt ccgttaattt cagtattact aattactact tacaccaaat
    29101 tcttttatat gctgttctcc gctaggattg attttcgtat tattggcggt cccataaacc
    29161 agctggatat ctttttccag gataacacca tcaactgtct caccatactc aactgttgat
    29221 gccaatgcta tgggtgaata taacgctgta gccaccagaa cagatattgc ggaacgacaa
    29281 agagaaacag aaccagattg atgcattgag ctttcatcct atgaaattaa ttgctgttaa
    29341 aagcattggg tacaaaaaat acccatagct ccatacccgg agtcagtttt taaaaactgt
    29401 ttaaagaaat gcacaagtat tgtgattgat tttttagttg tttttcttga tgagaagctg
    29461 atgcaaaatt ccgtctttat aatgaaaatg atgccaaagc gaacgacaag gttgtagttt
    29521 tcactacatg tccatacata aaatggggta acattcacgc gcctggtagc gttaccaacg
    29581 ctacgctcaa acataatgat tctaataaaa cctcaggaga ctactatgcc tgaagcaacg
    29641 ccttttcagg tgatgattgt ggatgatcat ccacttatgc gacgcggtgt tcgtcagtta
    29701 ctggagcttg atcctggctt tgaagtggtc gccgaagcgg gcgacggcgc gagcgcgatc
    29761 gatctggcga atagactgga tatcgacgtg atcttgctgg atctcaatat gaaaggtatg
    29821 agtggcctag ataccctcaa tgccttgcgc agggatggcg ttaccgcgca aattattatc
    29881 ctgaccgtat ccgatgcctc cagcgatgtc tttgcgctga tagacgcagg cgcagacggt
    29941 tatctgttga aagacagcga cccggaagta ttgctggaag cgattcgtgc cggagcgaaa
    30001 ggcagcaaag cctttagcga acgcgtcaat cagtacttac gtgaacgtga aatgtttggc
    30061 gcggaagaag atcccttcag cgtgctgacg gagcgcgagc tggatgttct gcacgagctg
    30121 gcacaggggc tgtcaaataa acagattgca tcggtgttga atatttccga gcagacagta
    30181 aaagtacata ttcgcaatct gctgcgtaaa ctcaatgtcc gctcacgcgt ggcggccacc
    30241 attctgttcc tgcaacaacg cggggcacaa taaaaatagc ccgatggatt tatcatcggg
    30301 ctgagattta tgacaaacgc aaaactgcct gatgcgctac gcttatcagg cctacgtgga
    30361 tcgatcaatt tattgaattt acacaatttt gtaggccgga taaggcgttc acgccgcatc
    30421 cggcataaac taagcgcact ttgtcatcag tctagcccga tggcatcacc atcgggcctc
    30481 tttttattta ctctcctgcg gcgacaaatg ttgcatcgcc tgcgcgatac tacgttcaat
    30541 caccgcacgg cgagtatcgt tggtaggtaa gagtttcaac atcatctccc acgcggcaac
    30601 ggcttcgcca aatcgctgct gctcaaaggc attaaacgca tacatgctta gcacacggat
    30661 attgctatgg tccgttctca ccagctgacg tagcagttca ccgccgaggc ggttgtcgtt
    30721 gggatcagat gaacgagtca acgcttcagc gtatcccagt gcggcatcgc tgttcttcgg
    30781 atcgaggcga tacgcagtag cgtatgcatc ggtggcgata ctggcgttac ccagcgccat
    30841 gccaacgcgg cccaacataa tccagccttc tatatctccc ggattttttt gcagttgagt
    30901 acgcatcccc agcgcaaggc gcgacatctc ttcttcgttg agcggatcgg ctttcgggtc
    30961 cagcgccctg tccagcaacg ccggagcctg tgccgtggcc tgctgccaga ttttcacctg
    31021 ctgataatta ccagtctggt agtagctgac gccagccaca attaacgcca ccacaatacc
    31081 cggcagataa acaacatatc cggcacgctt accttccggc acgctttgtt caggaaacgc
    31141 ttccggcacc acgagtaccc gacgccgcga gcgggcgtat atgacccaac cgccaatgcc
    31201 aatagccact actggcagca cccacagcag cacggtcagc ggcgttaacg gcggatcgta
    31261 agtgacgaag ttgccgtaac gcgccaccat ataatcgaca atctcttttt tacttttacc
    31321 ttcctgcatc agttcataca ctttctgacg caggtcggtg gcaatcatcg agttggaatc
    31381 ggcaatgctg ttgttctggc atttcgggca gcgcagttct tcagtgagct gacggaactg
    31441 ttgttcctgt gcttcatctt taaactgcaa cacgtcgatg gtcgccagtg ctgagccgga
    31501 gatcatcagc atcagcacgc ccaataaaaa cctcattgtg cggcctcctt actgtatttc
    31561 tcccacagcg gcttgatctc ttctccccag acgcgaggat tgagatcgcc cgcatggcga
    31621 tagcgaatga tgccgttgcc gtcaataagg aacgtttccg gcgcgccata gacaccgaga
    31681 tccagcccta acatgccatc gccatcaaac aggcttagcg cgtaaggatt acccagctct
    31741 ttcagccagc tgattgcctt ctggcgatcg tctttatagt tcatgccgac cacgcggatg
    31801 ccctgcgcag aaagctgatt cagatattga tgttccgcac ggcaggtcgg acaccaggtc
    31861 gcccagacgt taagcagcac cggtttgccc tgagtcagca catccgcctg ataaaactgc
    31921 cccggattgt ccagtgattc gagacgaaac ttcggcacag gcttgccaat gagcgccgat
    31981 tccagattgg tcggatcatc cccttcggca ttacgcgcca gctgccacag cagcgccgcg
    32041 gcaatcgcca ggaagataat caacggaatt aacaatactt tgcgcttcat acagcctccg
    32101 gcgcagtttt ctgcgggttc acgcgcttac gatagcgagg atcaaacaga cacagcagtc
    32161 cgcccaacgc catcatcagc ccgcccgccc aaatccagcg aacaaatggt ttgtagtaaa
    32221 gacgcacggc ccacgcgccg ttttccagct cttcaccgag cgcagcgtac aggtcacgcg
    32281 tgatgccgcc gtcaatcgcc gcttcggtca tcatcgaccc ggcagtgttg taataacgtt
    32341 tttccgcata cagcactgtt tccggtttac cctctcgcgt tacgccgata gtcgccacac
    32401 cgccacgcca gttcgggcca gtcacctctt tgacatcacg gaaggtgaag cgatattcat
    32461 gaatatcgac gctatcgccg gacttcatgc gcacatcacg ctcaacgcta tagttctgga
    32521 taaaggcaat gccaacaatt gtcactgcca gccccaggtg agccgccacc atcccccaat
    32581 aactgaaggt ggttttcgtg ccgcgtgaaa tacgtagcgc agcttccgca attgccagca
    32641 ccgcaatcca gcaggccatt gccaggccga gcaccgtcat cgccacaact ttgctttcga
    32701 acagccacgg caacagcaga gacagcacca gcgtagagat gaaggcgata atcaataaat
    32761 tgcggatttt acgtgggcga tcgcgccccc agcgcaccag aggaccgaca ccaagcagta
    32821 gcgcaaacgg caccatcagc caggtaaaca tggtgttgaa gaacggttcg ccaatcgaaa
    32881 tactgcccag tccaagttgc ttgtgcacca gcggcagcag cgtccccagc aacaccacca
    32941 gcatcgcggc ggccagcaaa acgttgttcg ctaacagcaa agattcccgc gaccacagcg
    33001 cattgtttac gcgtgagcga actttgtgtc cacgcgcggc aaacagcagc agcgaaccgc
    33061 caatcaccag caccataaag gcgaggataa acataccgcg cgccggatca gacgcaaacg
    33121 cgtgtaccga taccagcacg ccggaacgca cgaggaaagt ccccaacaga cacaacgaga
    33181 aggcactgat tgccagcagt aatgtccacg ctttgaagct ggcgcgttgt tcagtgaccg
    33241 ccagtgagtg catcagtgca gtccccacca gccacggcat aaacgaggcg ttttctaccg
    33301 gatcccagaa ccaccagcca ccccagccga gttcgtaata ggcccatgcg gaaccgagca
    33361 caatgccgag cgtcaggaaa atccacgccg ccagcgtcca cgggcgagta aaacgcgcat
    33421 aagtgctgtc cagacgcccg ctcagcaaag aagcaatggc aaaagcaaac gccaccgaga
    33481 aacccacgta ccccatataa agcagaggcg gatggaagat cagccccgga tcctgtaaca
    33541 gcgggttaag atcgcgccct tcaatcggga agttcggcag cgtgcgtgag aacgggttag
    33601 aggtaaagag aatgaacagc aaaaagccga cgctgaccat ccccattatc gccagtacac
    33661 gggccacaat atccagcgga atacgctgac taaaaatcgc caccgcaaag gtccagccgc
    33721 tcatcagcag cacccacagc agaagcgaac cttcatgcgc gcccaaggta gccgccacgc
    33781 gataccacac cggaagctgg gtattggagt tgctggcaac ataggtgacg gtaaagtcgt
    33841 tgaccacgaa agcattgacc agcaccagaa atgcgccagc cacagacata aacagcagcc
    33901 aggcaaacaa gcgggaagac gccatcatgc gcgcatctcc gcgcgccacg ccccatagcg
    33961 gatacacgga cagcagcagc gcaatcccta acgccaggca cagcagcccg tttccaattt
    34021 ccggcatcat gatgctgggt ccttataaac actcgccggg cgacggtggt tagcttccat
    34081 cgctttctca acttctggcg gcgtgtagtt ttcgtcgtgt ttcgccagca cttctttcgc
    34141 gaggatatga ttgccttttt ccagctcgcc ctgcaccaca acgccctgcc cttcacggaa
    34201 cagatccggc aaaatgcctt cgtaagagac atccactgag ccttcagcat cgtaaatggt
    34261 gaaggtcact ttcagcgaat tgggatcgcg ctgcacgcta cccggcatca ccatcccgcc
    34321 aacgcgcaga cgctgaccga cttccggcat ctgctgagtt tcacgcttgc cgtagagaat
    34381 ttcccccggc gtataaaaga gatcgatatt cgagcgcagc gcatatagca ccagaccgat
    34441 agtcagcgcc agccctgcca acacggcaca ggcaatccac aagcggtttt tacggcgaat
    34501 attcatgcag cctcctgctg ttgcgcagca cgtaaacgcg cctcacgcgc ccgctgttgc
    34561 gccacaccac gcagaattgc gcgatgttgc atcaccgagt gcacgaccat aaccaccagc
    34621 ggaataacgg tcatcaccac cgccagccag acaaaaaagg cgtaaccgcc cattgcgaaa
    34681 aattcattcc aggaagcaaa tgcaggggtc atttacggcc tcttttcagt atcagttcac
    34741 tcacccacgg acggcgtttt tccatcagca aaattaaatt acgcatccgc atcagcgtca
    34801 gcgtggcaga caggagcagg aagccaaaaa tcgaccagcg cagcggcgaa cgcatcgccg
    34861 gatcgatact ttgctgcatc cgcgttgatc cctgatgcag ggtgttccac cactccacgg
    34921 agtaatgaat aatcggcaga ttcaccacgc caatcagcac caggatacct gccgcacggc
    34981 ccgccagacg gcggtcgtcg aaggcgtgcc acagggcaat gacaccaaca tacagaaaca
    35041 gcagcaccag ttcagaagtc agacgtgcat cccataccca ccaggtgccc cacatcggtt
    35101 ttccccatgc agagccggta accagggcaa taaaggtaaa cacggcacca atgggggcca
    35161 tcgccgccac cgccaagttg gccattttca tctgccagac aaggccaata aacgctgcca
    35221 ccgccattga tgcataaatg cccatcgacc agatcgccgc aggcacatgc aggtagataa
    35281 tgcggtagct atttccctgc tgataatcag ccggagcaaa gccgaatccc cagatccagc
    35341 cgacggtaag cacgaccaca ctggcaattg ccagccacgg tataaaccag ccacagattt
    35401 gatacagccg tggtgggatc gtcagttgat gcagtgtttt ccacatagtt tcgataccag
    35461 actcgaacaa aaatcagtaa tccagcgtta ttgaatgctg attcgtaacg ctgccgccgt
    35521 cgcaaaagga cttaatgtcg cggtgcctgc cagcaacgcg cctaaaattg ccagataccc
    35581 gtcaacgggc aaatgcatgg aagccgcgtc catcgcggcg gtggcaaaga tgagtaatgg
    35641 gatagtcagc ggtaacacca gtatgctgag cagcacacca ccgcgcttaa gttccactgt
    35701 cagcgccacg cccggtgcac cgagaaagcc aagcgtaggc gttcccagca gcagcgtcag
    35761 cgccatcact tgccagccat aaacatccat tcccagtagc attgctacca gtggcgaaag
    35821 gatgagtaac ggcagaccgg ttaccatcca gtgcgccatc accttcgcca gcacaacggc
    35881 gggcaagggt aacggcaaca acatcaattg ttcaagactg ccgtcctgca aatcgtcacg
    35941 gaacagtcgt tccaacgcca gcaaggatga aagcagcgca gcaacccaga taatgcccgg
    36001 tgcaatacgc gccagcagtt gcggctccgg accgatactg agcggaaaaa gggtaattac
    36061 aatcaggaag aaccacagcg ggttggcgat ttcggcgcta tggcgaaacg ctacgcgcag
    36121 ttcaagacgg aaaatacgcc agaacatcat gcggccctcg tttgcgtcag tgaaatgcgg
    36181 cgaattttac tttcagcaac gttgagcggc tggtgggtag tcagaatcac aatccccccc
    36241 tgctccgtat gctgcgccat acgctgggtc agacgatcga cgccgttaac gtcaatcgcg
    36301 gtaaaaggct cgtcgaggat ccataatgtg gcacgggtca accacagacg cgctaaagcg
    36361 acgcggcgtt gttgcccggc agaaagttga tttaccggaa tatcttcgaa tccggcaagc
    36421 ccggcctgcg ccagggcttc cagacattgt gcggcatcgc catcgcgatg ataaaagtgc
    36481 agattttcta acgccgtcag ccgggttttg atccccggct gatggcctat ccataacagg
    36541 ttttgatggt agctgtcgcg tacctgatgc aagggctgcc cttgccagag aacctcgcca
    36601 gcgtcagggc gagacaaccc cgtcagcaaa cggagaagcg ttgtcttccc cgcgccgttg
    36661 ctaccggtga tttgtaccca ctctcctgcg ttcagcgtaa atgacaagcc actaaataag
    36721 gttcgttcat cccgctcaca aagtaactct ctggcttcaa gcatacccac gcaataaccc
    36781 tgttaaaaac ctggctcgac ttcacgcata tcgggcagct tgtgcgcgat ccctttatgg
    36841 caatcaatac aggtttgccc atctttcacc gcctggtcat gcatcttcgc ggcaaccgat
    36901 ttctgggcgg ttgtatccat atactcgaag ttgtgacagt tacggcactc ctgcgagtta
    36961 ttgtccttca tgcgccgcca ctcattctgt gccatcgtca gacgatgagc ttcaaatttc
    37021 tgcggcgtgt caataacgcc aaaaatttta ccatacagct ctttacttgc tttgagcttg
    37081 cgtatcatct tcggcacaaa ctcgtgcgga acgtgacaat ccggacaggt cgcacggacg
    37141 ccgctacggt tgttgtagtg cacggaatcc atgtattcct gatacaccgt gttgcgcatt
    37201 tcgtggcagc taatgcagaa ctcttcggta ttggcttttt ccatcccggt gttaaagcca
    37261 ccccagaaga cgatgccgcc aacaaaaccg atcaacagca gcgtccccag cgccagacgg
    37321 ctgggggtac gccaccattt ccacaggcgc ttaatcaggc caggcttacg gtcagaattt
    37381 cccataataa cctcttattt cccgtaacct tttgatgggg taaaggtatt ccccacgatt
    37441 ggcgcggtat cggcctgcgg tacgtgacat tgcagacaga aataacgacg cggagccact
    37501 tccgcgccca ctttgccgtc gctgtccata aagtgagtag ggctgatacg cggcgcgcca
    37561 gtggtgcgat agttttcgac accgtggcac tgtaagcagc ggttggtatt ggtcgttacc
    37621 tgataacctt caacgctatg cgggatcatt ggcggctgat tcacatagtt cagcggcatt
    37681 cgatcctgct cttttggcat ccgaatggcc ccttcctgcg tcccggatac ttccggcgac
    37741 tggctaaaat cgacgccatt agccgcccaa accgcgccgc ttaccaccag ggccagcatc
    37801 gccgtccatt gacacagcgc tttcttcagg tcatggcttt tcatgatttc gctcccgaac
    37861 tccatcgtgt agttattgta aatacatcct cagaacagac atccacgcag cgaccgcacg
    37921 tcatgcaatc gcggctggtg acctgcaccg ggctttgttc atccagcacc ggggcacgta
    37981 gcacatgcgg ttccgggcaa acatgaaaac aatccataca gcggttacat ttctgccgat
    38041 cggtggccgc aacggtaatc acacctttgc tacccagcac gccatacagc gcgccaaccg
    38101 gacaaatgtg cccgcaccag ccgtgttcaa cgaccagtag atcaaataaa aacagcgcga
    38161 gaataagcag cgcgccgctg ccgaagccca ttaccaggct acgccccatc agggaaacgg
    38221 ggttgatcca ttcccagatg agcgtgccgg ttaaggccga tcccagcaga atgaccacca
    38281 acagcacgta gcgaatgtgg cgagggatcg tcgcagactg attgaggtca aagcgcctgc
    38341 gtaaccaatt tgctaagtcg gtaatcgggt tcagcgggca gacccaactg caaaataatc
    38401 gctttcctgc cagggcgtag agcacggtga taatcaccgc accggtcaac gccaccgtgg
    38461 caggcagatg accactggca agactttgca gcgtcatcag cggatcggtc agcggaacgg
    38521 tatcgaataa caggctactg ctgtagttgc cgtgcaagat ccacacacca aaccacggac
    38581 cgctcaaaaa catccccagc acgaagaact gacaaaggcg acgtaacacc agccaacggt
    38641 gactgcgcca ccagcctttt ttctccagcg cctcgcgccc ggcgtcacgt ttacgatttg
    38701 ccattgttcc cctcctgcca gccgaagcgg taatggtgac ctaactcccc tttcgccagt
    38761 gacagcggta acaccttgat tgccggttgt tccagcacgc acactttttc gcacttaccg
    38821 caaccggtac aggcgtcgct gtgaaccgtc ggcagaaagc gggcgtgctt accggtacgc
    38881 gtgttgcgct ccagctccag ggtgatggcc tcatcaattt tcgggcattc gcgataacaa
    38941 acatcgcagc gcagcccctg aaagttgaga cagttttcct ggtccaccag taccgccagc
    39001 cccatccgcg cgtcgtcgat cgattcgatc tcacgatcca gcgcaccgct cgggcacact
    39061 ttggcgcacg gaatgtcctc acacatttcg caaggaatat cccgtgcgac aaaatatggc
    39121 gtgcccgccg acagaccaga ggccagcgtc gccagtttta aggtgtcgta agggcaagcc
    39181 tgaacacact gaccgcaacg cacacaggca ctggcaaagg cgttctcgtt tatggctccg
    39241 ggcgggcgca accgcacgcc agatgcgcgt gcggtttgct gttgtaaccc cagcgccaca
    39301 cccacggcag ccagcccgcc tgctgtgcga acaacatcgc gcagaaagcg gcggcgacca
    39361 ttttgaggtt tcgctgaccg ggacataatg gcttacacct tctccagttt gactgcgcac
    39421 ttcttgaagt ccgtctcttt cgagagcgga tcggtcgcgt ccagcgttag tttgttaacc
    39481 agctgtgcgg cgtcgaagaa cggcatgtac accaggccct gcggcggacg gttacgaccg
    39541 cgcgtttcga caatcgagat cacttcgcca cggcgagaaa ccactttcac tttgtcgcca
    39601 cgacgcagat cgcgcgcttt cgcatccagc gggtgaataa acagaaccgc ttccgggaag
    39661 gcgcggtgca gttctggtac acggcgagtc atactgccgg tgtgccagtg ctccagaacg
    39721 cgtccggtag agagccacag gtcgtactct tcatccggtg cttccgccgc cggttcgaat
    39781 ggcagtgcga agatcaccgc tttgccatcc ggtttaccgt agaacttata gccttcgccc
    39841 gctttcacgt acgggtcgtt accttcgctg taacgccact gcgtttcttt accgttcacc
    39901 accggccagc gcagaccgcg cgctttgtgg tagtcatcga acggcgcgag atcgtgaccg
    39961 tgaccgcgac caaaccatgc gtactcttcg aacagccctt tttgcagata gaagcccagc
    40021 tcgcgggatt catcgttcag ctgatcttcc gccagttcgg ataccgggaa tttgctcact
    40081 tcgggggtgg catacagaac ttcgtacagc gttttgccac gcagttccgg tttcttcgcc
    40141 agcagctctt ccggccatac ttcttcagtt ttgaagcggc gggagaactg gactaactgc
    40201 cagagatccg atttcgcttc gcccggtgcc tgtacctgct gacgccagaa ctgagtacgg
    40261 cgttcggcgt taccgtaagc gccctctttc tctacccaca ttgcggtcgg caggatcaag
    40321 tcggcggcca gcgcactgac tgtcggatac ggatcggaga cgatgatgaa gttgcgcgga
    40381 tcgcgccagc ccggcatacg ctcttcattg atgttcggcc cggcctgcat gttgttggta
    40441 cacatggtcc agtaaacatt cagcttgccg tctttcagcg cacggtcttg tgctaccgca
    40501 tgcagaccga ttttcgccgg aatggtgccg ctcgggatat tccacttctt ctcgcagata
    40561 tcacgatgct tctcgttagt caccaccatg tccgcaggca gacggtgagc aaaggtgccc
    40621 acttcacgcg cagtaccaca cgcggaaggc tgcccggtca gggagaacgg accgcaaccc
    40681 ggctgggaaa ttttgccggt cagcaggtgc aggttgtaga ccaggttgtt ggcccacacg
    40741 ccacgagtat gctggttgaa gcccatcgtc cagtaggaga tgactttctt gttcggatcg
    40801 gcatacagct gcgccagttg ttctaactgg tctttcggca cgccggtcat ttcagcggtt
    40861 ttttccagca tatactcagc aacgaaggct ttgtaatctt caaagctcat cggttcggag
    40921 gcgtcagaac ccggattctt cgctgctttt tccagcggat gggtcggacg taaaccgtag
    40981 ccgatgtccg tcgccccttt gcgcaggtta acgtgtttgc tgaagaagtc ctgatttatc
    41041 gcattgtttt gaatgatata gttggcgatg tagttcagga tcactaggtc agactgtggc
    41101 gtaaagatga tgccgttatc cgccagctcg aagctacgat gctggtaggt agaaagcacc
    41161 gccacggtga cgttctggtt agagagacga cggttagtga tgcgcgacca gaggatcggg
    41221 tgcatttccg ccatgtttgc gccccacagc acaaacgcgt cagcctgctc gatgtcgtca
    41281 tagcagccca tcggctcatc cataccaaag gtacgcataa agccaactac tgccgacgcc
    41341 atacagtgac gcgcgttcgg gtcgatgttg ttcgaacgga agcccgcttt aaacagcttg
    41401 gacgcggcat aaccttccca gatagtccac tgaccagaac cgaacatacc gatcgattcc
    41461 ggcccttttt ctttcagggc ggttttgaat ttctcttcca tcacatcgaa ggcctgatcc
    41521 caggtgattg gggtaaattc gccttctttg tcatatttac cgtttttcat acgcagcagc
    41581 ggctgcgtca aacggtcttt accgtacatg attttgggca ggaaatagcc cttaatgcag
    41641 ttcaggccac ggttaaccgg tgcgtccggg tcgccctgac aggccaccac acgcccctgc
    41701 tgcgttccga ccagaacgcc gcaaccagta ccgcagaaac ggcacggcgc tttatcccat
    41761 ttgatggctt cctgctgacc aacaacggcg cgggcaacgc ccggcacgct gagaccggca
    41821 gccgccgcag cggccgcaac ggcgttagct ttcataaagc tacgacgact gagtttcatg
    41881 gtgtttcctc accttgctct tcctgctggt gataaaccag cgacaccgcc agcacgccct
    41941 ctacgttgcg tactgactca atggtttgga tcagcgtttc gctgtcttct gcttccacca
    42001 ccacaatcaa ctgaccgctc ggcgcgtcgc tgacagcaac ttcacagccg ggaaaggcgt
    42061 tcagttgggt gctgatgtct gaaattcgtt cgcttttggc ctgcacgacc aggctgcaaa
    42121 cttgccagtt agtgtgcatg gagatactcc gcagttatgg ctgataccgg acagctggct
    42181 gcacatgctc cacatccgtt gcaaagttgg ctattaagtt gcggctggta gatcccggag
    42241 agcgtcgggc gaaagataat tgccattggc tcacagctat cctgacagcg gcggcattca
    42301 actgactgat acgccaggca cgcgtcccca atggtgaact gcaaatccca ggccctggtg
    42361 tggcgcggag aaaatagcga ttcggggcaa gcctgcgcgc aggcgtaaca gaagctgcac
    42421 tcgttatttt tgaaattaac gctcggatag ccgcccgcgc cgcgttgcag aatgttgttt
    42481 tcacaagcat taatacaggc gtcgcaacgg gtgcaatggg tcagaaaatg agattcatca
    42541 ccggaccagg gcggacggat accgttactg gctttgcgcc agcgaccagt gagtatgccc
    42601 cgacgggatg catcaatctt cacattgacc ttccatcatt aacgcgctct gaaaattgag
    42661 agcgaccaaa taaaccgcat aattaataag ccatttttat agccgctaag atattaaagg
    42721 atgtgtcaaa gatgcatacc ccgatcgggg taaaacctgt agcaagatca aaagagtggc
    42781 gggaagcgtg gcaaaaacgg gcttttgctc acatttcaaa tggttataaa catatttata
    42841 tagcgattaa ttcaccagag atatttctgc tggtttgctc cctcatcaga atttaacact
    42901 aaaagagcag gtaaaattgt ctgaatgttc tttaagttat tcataaagca aattaataaa
    42961 tctgatgaat atgttaacct tcagcgacat catcggtgaa aacctataaa tgaagaagga
    43021 aagcaaaaaa atgaagacca ttctacctgc agtattgttt gccgctttcg ctaccacttc
    43081 cgcctgggcg gcagaaagcg tccagccact ggaaaaaatc gcgccttatc cacaagctga
    43141 aaaaggcatg aagcgtcagg tgattcagtt aaccccgcaa gaagatgaat ctaccctgaa
    43201 agtagaactg ttaatcggtc agacgctgga agtcgattgc aatttgcatc gtctcggcgg
    43261 gaagctggaa agcaaaacgc tggaaggctg gggctatgat tattatgtct ttgataaagt
    43321 tagctcgccg gtttccacga tgatggcctg cccggatggc aagaaagaga agaaatttgt
    43381 caccgcgtat ctgggcgatg ctggaatgct gcgttacaac agcaagctgc cgatcgtggt
    43441 gtatacgcca gacaatgtag atgtgaaata ccgcgtctgg aaggcggaag agaaaattga
    43501 caacgcggaa gttcgctaaa ctgttgtgaa gtacggcacc ccgtaggttg gataaggcgg
    43561 ttacgccgca tccaacatct aacgcccgag ccggttgcct gatgcgacgc tggcgcgtct
    43621 tatcagtata cgccacatcc ggcataccat gccggatgtg gcacatcatt acaacgcaat
    43681 atccgccact tctttttgaa cgggttgcgg tttcaactgc ggtttcggcg tactatctgc
    43741 tgcctgcggc ttgtcgtatt tcaggcccag cacttcgctg gtgtactgca actcgcgttc
    43801 tgttgccgct acatcaccgt tcagcttgcg tccataagat ggaacgatcg ctttcaacgt
    43861 agcctgccat tgcgggctgg aaacgcgatc gccaaatact ttttccagca gattcaacat
    43921 aatcggcgcg gcggttgacg cccctggcga tgcccccagg agcgcggcaa tggttccttg
    43981 ctggtcactg accacttcag tacccagacg cagtacacca cctttatcgg catcacgctt
    44041 gataatctgc acacgctgcc ccgcttgcca caaacgccag tcctcttttt tcgcttgcgg
    44101 atagtactct ttcaacgctt caaaacgatc ctcttcactc aacatcacct gactcaccag
    44161 atatttcacc agatcgaaat tatccagccc gacgtgcatc atcggcatca cgttagaggt
    44221 ggtggtggaa ctcatcagat cccacaatga accgtttttg aggaatttgg ttgagaaggt
    44281 ggcaaatggc ccaaacagca ctacgcgttt accgtccaga acgcgggtat cgatatgcgg
    44341 aaccgacatc ggtggtgcgc caacggatgc tttaccgtaa accttcgcca gatggtgatt
    44401 aaccacgtcc gggttttccg aaacaaggaa ctgtccgccc accgggaaac cggcgtagtc
    44461 tttcgcttcc ggaatccccg attcctgtaa cagcttcagc gccgcaccgc ccgcgccgat
    44521 aaagacaaat ttggcgcgga tgttctgtgc agtgccattt ttcagatcgg caacggtaac
    44581 ggtccaggtg ttatcgtcat tacgctttag ggcgcggact tcgctgctga gttgcagcga
    44641 gaagttagat ttcttctgca aggaagcaat taactggcgg gtgatctcgc catagttcac
    44701 atcagtgcca atttctgtgc gtgttgccgc tactttctgt tgcggatcgc gcccttccat
    44761 cactaacggt gcccactctt tgatctgcgc gtgatcttca gagtaacgca taccgcgaaa
    44821 cagcgagctt tgttgcaacg cggcgtaacg ggcgcgcagg aaattgacgt tatcctcgcc
    44881 ccagacaaag ctcatatgcg gaacggtatt gataaatgaa cgcggagtac gcagcacgcc
    44941 gcgctcgacc tggtgcgccc agaactggcg ggaaatctga aatgcttcgt taatggcgac
    45001 tgctttttca atactgatgc tgccatcggc gttttgcggg gtgtagttca gttccatcag
    45061 tgcagaatgc ccggttccgg cgttgttcca gccgttcgaa ctctcctgcg cgaccccctc
    45121 caggcgctcc accatggtca tcgaccattc aggctccagc tcgcgtaaat aggtccccaa
    45181 cgtggcgctc ataatgccgc cgccaatcaa cagtacatcc gtttcctgct cctcggacgc
    45241 tttcgctttt gccgccatcg aaacggcatt aagccccacg gccatcgaga agagcatggc
    45301 agtcactttt ttcatcttgt taatgcctta cttttagtcg ctttattgca ggtgagattt
    45361 gcgcggcatc aacggtaaca cttaagtaat aacatttaaa taatgtttat aaattatatt
    45421 ctaattttag aaacattata atttcgttga ttaattatag ggttattaga aatgaaggga
    45481 tttttagcat attgacctga cggcagcagt ccgccaggtc agcgtcgtaa tattatgccg
    45541 tccgggcaac ggcatcacgc gaagcggcat cgcgctcttc gcccgtcagc tcgctaagtt
    45601 gcccattgcg catttccagc aggcggtcgg cgtggataaa gtaatgatca tcatgactga
    45661 tagcgaaaat agttttaccc atctcctgca tcagcggcag caacacctga taaaactcac
    45721 gacggaagtg tggatcctga tccgccgccc attcatccag caggataata tcgcgttctt
    45781 ctgccagcgc cagcaacagc gccacgcgtt ttttctgccc ttttgataac ttcaggttaa
    45841 caatacgccc gttgcttaac tcaagcttat gagccatttt cagctgcgcc agccacttct
    45901 caaccagttg cgggttagcg ggttgcccct ccggccccag cagttgatca aacagccaga
    45961 catcggtaaa cactgccgaa aacagtttgc gataatcttc cggttgttcg ccgctgacag
    46021 gtttgccatc cagcaagatt tcgccgcttt gtggctgata caagcccgtc aacaacatcg
    46081 ccagcgtcga ttttccgcta ccgttgccgc caatcagaaa cagcagctcg ccacgtttga
    46141 tggtgagatt aatcggacca acggaaaacg tgttatcctg ataagcaaac gtcacgttac
    46201 gcagctccag cgtttgccag ttgggaaacg cctgcgggcg cggaaactct gctttgaaag
    46261 gcgcgagcgc gaatttgttc agcttgttaa acgccacctg cgccgtcagc agcgtcggca
    46321 atgcgccaac cgccgaaagc agcggcgtac gcaggaataa aagcgtcaac gaataggtcg
    46381 cggcaacgtt ggtatcagcc caaccgagac tgttcgccat ccagaacaca aggccgatag
    46441 cgcccagcat catgatgttt gaccagttca cggcactaag atggaaggtg tctgcgcgaa
    46501 taatatgatg gcgatactct tgcgcatcgg ggatgtagag gttgttaaac acatactcgg
    46561 cgcgttcccg gttcagagtc agctctttgc gccctgcaag tacagtttga aaatccgtgt
    46621 acagcttgtc ttcggtttca cgcagggtcg ccatatgttt gtacacccgc gccaccagca
    46681 caaaaccgcc ccagatggtg atcgccatcc agatagccgt taccagcaac attttgcccg
    46741 acagcatcca cagatacgcc gctgaaccga tagtgagaat gatcccctgc accagttccg
    46801 gcagacgcac aaaagcaatg gtgatattgc gcacatcgct ggttaatccc gccagcaacg
    46861 aggcgctacc gagttgttca atgcgctcga cgtgggtatc cagaatccgc ttgataaatt
    46921 cactacgcag tcggtaaacg aagtgatgcc ccaaagtggt gagcgccagt tgcgatccca
    46981 gtgttaccgc cattaacagc agcaataaac ccagaaactc cggcaacacc agcagactgg
    47041 tatccgccgt ttcgataagg cgctgattga taaaagcaat taagccaatg cctaaagccg
    47101 cactggcgag gcttagcgcc atcacactga taaatggcca gcgatactgc cgccagacaa
    47161 gtacaagaag ttccatgcag aaaacccgga caatgaatta cagcccgcag tttaaacatc
    47221 ttcgcgcgca cagcaataat aattcttatt tttattcttt tttacctgcc tgacggaatg
    47281 tcaggttgta gcggcagtcg gtggtgagtg gatgaaaccc cgctttcaac ggttgaatac
    47341 cgtgataaaa cagcctcgat tcaccgcccc ataccaccac atcgccatgt tccaacaaca
    47401 aacgtttgag cggatcatta cgtttcaggc caccaaattg aaaaatcgcg ggtaagccca
    47461 gagaaacaga aacaattggc gcgcgcagat ccagttcgtc tttatcctga tgcagcgaca
    47521 gtttcgcgcc aggagcgtag cggttgataa gacaagcatc tggctggaaa tctggatagc
    47581 ccgccgccgt agccgcacgt tgacataaat tatgaaaact ctgcggcatg gcgggccacg
    47641 gtttatttgt ttgcggatca atgggcgaat agagataacc ttgccgatgg gtcgtccagc
    47701 ccagatgccc acagttggtc atcgcccccg acatggtata tcccccgggg gtgaccatct
    47761 ggcgaaacgg cgactggctg gcaacgtcat taatatcgcg gatcagttgc tccgcagcgt
    47821 taaaagcaaa acgccgtaaa attaccgcac cagccgccag tggctcttgc cacggttcag
    47881 catcggcaaa cagatccaac attacctctc ctcattttca acttcgcggc gcagcagttg
    47941 cgctttacgc gacacgcccc agcggtaacc ggaaagtgtg ccatcaccac ggaccactca
    48001 atgacagggt attacgatag ccagcttgtt ggcggcacag gcgctggcaa cggcccgtac
    48061 cgctttcggt ttgccgatgg cgttagccag ttgctgataa ctgacggttt caccgcaagg
    48121 tatcgtgcgc agtgcctgcc agacttgttg ctgaaaagca gtgccgcgaa tgtccagcgg
    48181 taacgtcagc ggcgtatcgc gttgattgag gctggcgatc acttcacgca catgttgctg
    48241 aaacatcaga tcggcaggcg cgttgtcggc agcgggaaac atttgctgca actcgctgat
    48301 taatgtggcg tcatcatcgc ccagcaatat cgcgcaaatc ccccgctcgc tttctgccac
    48361 caggcaacga cccagctcac aatcagccag cgcgtaacgc accgccagat tttcgccacc
    48421 gtgacggaat tgtttagccg tcatgcccag cgtttcatcg gcttttcggt agtaactgct
    48481 gctgtcgggg aatccggcgt taagaataga cgtcgtcacg ctctcccctt tcgccagcga
    48541 ttcgcgcaaa cggcgagcgc gccaggcctg ttgccaggct ttaggcgtca ttccggtagt
    48601 cgctttaaac aaccgatgta gatgaaatgg actcatcgcc acctggtcgg ctaaggcttc
    48661 cagcgttaca ggcgtttcct gttccagcag tcgacacgcg tgggtgattt tatccaaccg
    48721 atgttgccgg ggattggctt tgtctggctg acaacgtttg caggggcgaa atccggcggc
    48781 gagtgcctcg ctggcatttg cgtagaagga gacattttcc cgcaaggcat gtctggcgcg
    48841 gcaagacgga cggcaaaaga tacccgtggt gcgcacggcg aaaacgaatt cgccgtcggc
    48901 attcgggtcg cgggctaaga cagattgcca gcgttgatcg tcagttaagc atgtggcgtt
    48961 tttcataatc agctccctgg ttaaggatag cctttagtct gcccggtcac catcacgcaa
    49021 aaaccaacaa tcttgcgctt taattttttt cgctgataag gaagctttta aactgtggtg
    49081 acatccaggt tttaaagcta tcgccttctt tggtgatcat ataaaccgcc agcccttccc
    49141 ggcgaacaac ctctttggct ttctccggcc cgagtaccat caagccagta tcccaggcat
    49201 cggcttccag cgccgtcgga gcaatcaccg tcacggatac cagattgtgt tcgatgggac
    49261 gcccggtttg cggatcgata acatgggaaa gacgtttgcc gtccagttcg taatagttac
    49321 ggtagctgcc agaggtgcta atcccatgac cgttgatatc caccacagcc tgaaccgcgt
    49381 tttctttatc ggttggtttt tgaatcgcta cccgccacgg caggccttca ccgttcatac
    49441 cacggctgtt cagcgcgccg cccaccgaca ccagatagcg ggaaatccct tcctgctcca
    49501 tcaagcgtgc caggtgatcc gccgcataac cttcaccgac ggtggagaga tcgacatata
    49561 aatccggcag gtctttttgc agatattgct gatgcgactg attaatgacc gtcaggtgct
    49621 gtaagccggt tttggctttc atcgcatcga tctgttcctg gctcggaatt tgaaccggct
    49681 gttgttccgg gccaaagccc cacagattca ccagcggccc gacggttata tccatcgcgc
    49741 catcggtctt cgtgccaatg cgcagcgagg tggtgacgat atcggccatc gcttcactta
    49801 ccggccacgg cgataaactt tgcgaatcgt taaagcgcat cagcgcggaa tcttttttat
    49861 aggtcgaaag cagctgatcg tcggcgtcca gctgggtctg aatcttttct ttaagttcgg
    49921 cactgcgttt ggcatcaatg cccgggatgc tggcacgcca gaaggtaccc atggttttgc
    49981 cttctagaac ggtaacttca gtagcgtggg ttttggcggg ttgtggtttt tgatcgcaac
    50041 caacaaagaa gagcgcggca gccagcagtg ccacgcgggt aaagcttatt tccatacgtg
    50101 attatcctca tgcgaacggt cgcaagagta caccaaaaaa ctgtgtttgt acgctgaaaa
    50161 caatgaaaaa agggcccgca ggccctttgt tcgatatcca tcgagattag aactggtaaa
    50221 ccagacccag agctacgatg ttatcagttt tgatgccagc gtcacgagtg aactggttgt
    50281 cgtccagcag gttgattttg tagtcaacgt aggtggacat gtttttgttg aagtagtagg
    50341 tcgcaccaac atcaacatat ttcaggatat cttcgtcgtc gtagttacga ccagcaacga
    50401 cacctaggtt tttaccttta gactgcaggt atgctacaga cggacgcaga ccgaagtcga
    50461 actggtactg agcaacagct tcgaagttct gtgctttgtt cgcccaaccc agggaaccta
    50521 cgcgagttgc gttgtaggtc tgggtgtact gagcagcaag gtagatgttg ttagcgtcgt
    50581 atttcagacc accagtgtag gtttcagcac ggtcgccgtt accgatgtaa gcagcggtgt
    50641 tctgagcatc agtacgtttg gagctggaaa ctgcagcacc gataccgaag ccttcgtaat
    50701 cataagtgat agacccgccg acaccgtcgc cgttctgacg cagagcgcca cgaccgttgt
    50761 tggtcatgcc ttcgccgctt acgctaccgt ttttgccctg gtactgaaca gcaaagttca
    50821 gaccgtcaac cagaccgaag aagtcggtgt tacggtaggt cgcgaagccg ttaccacgct
    50881 gctgcatgaa gttgtcagaa ccgtaggtgt cgccaccgaa ttctggcagt acgtcggtcc
    50941 aggaagttac gtcgtaaaca acgccgtagt tacgaccgta gtcgaaagaa cctacatcct
    51001 ggaatttcag acctgcgaat gccacacggg tccaagagtt ttctttgttg tcttcagagg
    51061 tattgccctg gatctgatat tcccactggc cgtaaccggt cagctggtca gtaacctgag
    51121 tttcgccttt gaaaccaaga cgtacatagg tctggtcgcc gtcttctgac ttgttgtcag
    51181 agaaatagtg caggccgtct actttaccgt acagatctaa tttgttgccg tctttgttgt
    51241 aaacttcagc agcgtttgct gctcctgcta ccagcagagc tgggaccagg agggacagta
    51301 ctttaacttt catgttatta accctctgtt atatgccttt atttgctttt ttatgccact
    51361 gcatactgat taaccctcat taatcagtcg gcaagtccat tctccccaaa aatgcagaat
    51421 aatccaacac gaatatgata ctaaaacttt taaggtgttt catttatcgc tatagatgtt
    51481 tcaaaatgta aatacaaggg aactttttaa gattattgca gaatggcgaa ataagcacct
    51541 aacatcaagc aataataatt caaggttaaa atcaataact tattcttaag tatttgacag
    51601 cactgaatgt caaaacaaaa ccttcactc
//
LOCUS       DAJVTL010000011        50824 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.011, whole genome shotgun sequence.
ACCESSION   DAJVTL010000011 DAJVTL010000000
VERSION     DAJVTL010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 50824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 50824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..50824
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.011"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..236
                     /locus_tag="OQQ26_000638"
     CDS             <1..236
                     /locus_tag="OQQ26_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="acetyltransferase believed to catalyze the addition
                     of the acetyl group that is attached through an O linkage
                     to the first fucosyl residue of the colanic acid
                     repetitive unit (E unit); wcaB is induced in sessile
                     bacteria and by osmotic shock, and repressed when grown in
                     rich medium; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
                     /protein_id="HCS1856214.1"
                     /translation="AGDDFTIRHGVTIGNRGADNMACPHIGNGVELGANVIILGDITL
                     GNNVTVGAGSVVLDSVPDNALVVGEKARVKVIK"
     gene            233..1450
                     /gene="wcaC"
                     /locus_tag="OQQ26_000639"
     CDS             233..1450
                     /gene="wcaC"
                     /locus_tag="OQQ26_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HCS1856215.1"
                     /translation="MNILQFNVRLAEGGAAGVALDLHQRAMQQGLASHFVYGYGKGGK
                     ESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHV
                     LHSYWLNLKSVVRFCEKVKNHKTDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
                     TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN
                     NGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQHLVREMMALDDKIELHT
                     FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI
                     ATHSDAAREVLQKSGGKTVSEEDVLQLVQLSKPEIAQAIFGTTLAGFSQRSRAAYSGQ
                     QMLEEYVNFYQNL"
     gene            1425..2642
                     /gene="wcaD"
                     /locus_tag="OQQ26_000640"
     CDS             1425..2642
                     /gene="wcaD"
                     /locus_tag="OQQ26_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
                     /protein_id="HCS1856216.1"
                     /translation="MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLL
                     LFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIR
                     FKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGSSSIMESISKYLIYSNSYVL
                     NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGV
                     MTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGMVIAFPYISTRLGDLGTEGS
                     SSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIY
                     FSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIV
                     CPFILRKALNITR"
     gene            2653..3399
                     /gene="wcaE"
                     /locus_tag="OQQ26_000641"
     CDS             2653..3399
                     /gene="wcaE"
                     /locus_tag="OQQ26_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaE"
                     /protein_id="HCS1856217.1"
                     /translation="MLLSIITVAFRNLEGIVKTHASLAHLAQADDISFEWIVVDGGSN
                     DGTREYLENLNGIYNLRFVSEPDNGIYDAMNKGITMAQGKFALFLNSGDIFHQDAANF
                     VRNLKVQKDNVMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKW
                     RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQ
                     ILHVPGFWAELSWHLRQRTTSKTKALYNKS"
     gene            3415..3963
                     /gene="wcaF"
                     /locus_tag="OQQ26_000642"
     CDS             3415..3963
                     /gene="wcaF"
                     /locus_tag="OQQ26_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaF"
                     /protein_id="HCS1856218.1"
                     /translation="MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRA
                     FLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQ
                     KSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKS
                     LPANVVCRGNPAVVIRERVETE"
     gene            3990..5111
                     /gene="gmd"
                     /locus_tag="OQQ26_000643"
     CDS             3990..5111
                     /gene="gmd"
                     /locus_tag="OQQ26_000643"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HCS1856219.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHTCDPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF
                     EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWK
                     PEITLREMVSEMVANDLEAAKKHSLLKSYGYDVAIALES"
     gene            5114..6079
                     /gene="fcl"
                     /locus_tag="OQQ26_000644"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
     CDS             5114..6079
                     /gene="fcl"
                     /locus_tag="OQQ26_000644"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /EC_number="1.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HCS1856220.1"
                     /translation="MSKQRIFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDS
                     RAVHDFFACERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL
                     LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS
                     VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
                     AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK
                     PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRG"
     gene            6082..6560
                     /gene="gmm"
                     /locus_tag="OQQ26_000645"
                     /gene_synonym="nudD"
                     /gene_synonym="wcaH"
                     /gene_synonym="yefC"
                     /pseudo
     CDS             6082..6560
                     /gene="gmm"
                     /locus_tag="OQQ26_000645"
                     /gene_synonym="nudD"
                     /gene_synonym="wcaH"
                     /gene_synonym="yefC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707946.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
     gene            6557..7780
                     /gene="wcaI"
                     /locus_tag="OQQ26_000646"
     CDS             6557..7780
                     /gene="wcaI"
                     /locus_tag="OQQ26_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
                     /protein_id="HCS1856221.1"
                     /translation="MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYY
                     PQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQR
                     RWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVA
                     QLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAESVIFFPNWSEIARFQHVAEADV
                     DALRNQLGLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLE
                     KMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN
                     AVITAEAHTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTMAREYAERTL
                     DKENVLRQFINDIRG"
     gene            7783..9219
                     /gene="cpsB"
                     /locus_tag="OQQ26_000647"
     CDS             7783..9219
                     /gene="cpsB"
                     /locus_tag="OQQ26_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanyltransferase"
                     /protein_id="HCS1856222.1"
                     /translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
                     KRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
                     IRRGEVSAGEQDTVAFEVAQFVEKPNLQTAQAYVASGEYYWNSGMFLFRAGRYLEELK
                     KYRPDILDACEKAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG
                     WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFADRYGRV"
     gene            9324..10694
                     /gene="cpsG"
                     /locus_tag="OQQ26_000648"
                     /gene_synonym="manB"
     CDS             9324..10694
                     /gene="cpsG"
                     /locus_tag="OQQ26_000648"
                     /gene_synonym="manB"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis phosphomannomutase
                     CpsG"
                     /protein_id="HCS1856223.1"
                     /translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG
                     GDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLVREGARPISGDTGLRDVQRLAEANDVPPVDETKRGRYQQINLRDAYVDHLF
                     GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP
                     NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
                     KNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
                     FRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLAQPAEAINR
                     VEQHFSREALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTRTL
                     LTLLNE"
     gene            10749..12144
                     /gene="wcaJ"
                     /locus_tag="OQQ26_000649"
                     /pseudo
     CDS             10749..12144
                     /gene="wcaJ"
                     /locus_tag="OQQ26_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310879.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
     gene            12146..13624
                     /gene="wzxC"
                     /locus_tag="OQQ26_000650"
     CDS             12146..13624
                     /gene="wzxC"
                     /locus_tag="OQQ26_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid undecaprenyl disphosphate flippase
                     WzxC"
                     /protein_id="HCS1856224.1"
                     /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
                     TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGLVVCVAVFLLSDAI
                     GDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSVVLAGFTFTV
                     VSAHFWPLAMTAILGYLVNSAVRTLLFGYYGRKIYRPGLHFSLASVAPNLRFGAWLTA
                     DSIINYLNTYLSTLVLARILGASVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
                     DDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCVVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
                     INTILSYFVMIKPVLGSSCRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
                     VQIAAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG"
     gene            13804..15084
                     /gene="wcaK"
                     /locus_tag="OQQ26_000651"
     CDS             13804..15084
                     /gene="wcaK"
                     /locus_tag="OQQ26_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
                     /protein_id="HCS1856225.1"
                     /translation="MKLLILGNHTCGNCGDSAILRGLLDAINILNPQAEVDVMSRYPV
                     SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSCVTDTGKLRNI
                     AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
                     FQDEQFNQLANYVFGHCDSLILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDF
                     TASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQV
                     IALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT
                     RLHSAIISMNFSTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
                     LPALNARLSEAVSRERQTGMQMVQSVLERIGEVK"
     gene            15081..16301
                     /gene="wcaL"
                     /locus_tag="OQQ26_000652"
     CDS             15081..16301
                     /gene="wcaL"
                     /locus_tag="OQQ26_000652"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HCS1856226.1"
                     /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTEN
                     THATWTKYNLAGRTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESR
                     NLILSAICGQVATPFHADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREV
                     LNHYTPEYQQLFRRGDLMLPISNLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA
                     PATPLEIISVARLTEKKGLHVAIEACRQLKEQGMAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVVEMLGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
                     LHSGIQELVEADKSGWLVPENDARALAQRLAAFSQLDTDELAPVVKRAREKVEHDFNQ
                     QVINRELASLLQAL"
     gene            16312..17721
                     /gene="wcaM"
                     /locus_tag="OQQ26_000653"
     CDS             16312..17721
                     /gene="wcaM"
                     /locus_tag="OQQ26_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HCS1856227.1"
                     /translation="MPFKKLSRRTFLTASSALAFLHTLFARALPARQSVNINDYNPHD
                     WIASFKQAFSEGQTVVVPAGFVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGS
                     QVTGEKGGSMHNITLDVRGSDCTIKGLAMSGFGPVTQIYIGGKNKRVMRNLTIDNLTI
                     DNLTVSHANYAILRQGFHNQIIGGNITNCKFSDLQGDAIEWNVAINDHDILISDHVIE
                     RINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFV
                     IRNIKACNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLS
                     IPQNFRVNNIQMDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHLFM
                     RNIKVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRV
                     NHHIVNVEKINFRLPERRE"
     gene            17879..18874
                     /locus_tag="OQQ26_000654"
     CDS             17879..18874
                     /locus_tag="OQQ26_000654"
                     /EC_number="5.1.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,
                     octacis-undecaprenol 4-epimerase"
                     /protein_id="HCS1856228.1"
                     /translation="MNDNVLLIGASGFVGTRLLETAIADFNIKNLDKQQSHFYPEITQ
                     IGDVRDQQALDQALAGFDTVVLLAAEHRDDVSPTSLYYDVNVQGTRNVLAAMEKNGVK
                     NIIFTSSVAVYGLNKQNPDENHPHDPFNHYGKSKWQAEEVLREWYNKAPTERSLIIIR
                     PTVIFGERNRGNVYNLLKQIAGGKFMMVGAGTNYKSMAYVGNIVEFIKYKLKNVAAGY
                     EVYNYVDKPDLSMNQLVAEVEQSLNKKIPSMHLPYPLGMLGGYCFDILSKITGKKYAV
                     SSVRVKKFCATTQFDATKVHSSGFVAPYTLSQGLDRTLQYEFVHAKKDDITFVSE"
     gene            19117..20016
                     /gene="galF"
                     /locus_tag="OQQ26_000655"
     CDS             19117..20016
                     /gene="galF"
                     /locus_tag="OQQ26_000655"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalF"
                     /protein_id="HCS1856229.1"
                     /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV
                     RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
                     QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS
                     ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGATLRNYITKKLLKSD"
     gene            20188..20991
                     /locus_tag="OQQ26_000656"
     CDS             20188..20991
                     /locus_tag="OQQ26_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000433220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCS1856230.1"
                     /translation="MEPFSVLMSLYIKEKPEYFEECLISLKDQTLMPNEIIIILDGQI
                     TTALKSVIAKWKKCLPIKIISLDKNVGLGNALKLGLKNCTYRLVARMDTDDICHPQRF
                     EKQILQFENDNDLVLVGGNICEFNEDFSIKISKKRVPISPQDIKKYAQFRNPFNHMTV
                     MFDRYKIIDAGSYSHHLFMEDYNLWLRCLAKNYKMINLTEDLVYVRGGISMIRRRKGI
                     NYVKSEIQLYNIKKRLKIVSGIKGIKILIFRVLPRLMPQSLLFMIYKNR"
     gene            20993..22030
                     /locus_tag="OQQ26_000657"
     CDS             20993..22030
                     /locus_tag="OQQ26_000657"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCS1856231.1"
                     /translation="MKIAILVNSLEIKGPVIVAVNLAKQLYEAGEDVTLLYLNDKVER
                     IDTYGIKIKKINLVSFYILREFDIIHSHSLAPDLLNAFQRVIFKNRSITTVHNNIYTD
                     LYPEYTKLKSIILKSLWQISWWFIDEKICISKSLLNQYDNAKKKGWNYVYNSIRDDNN
                     LGLNDFDLNAINVLKKIKREGKIIVGSCAVITERKGLQHLVSAARFLPDKYRIVIVGD
                     GPYKVNLMKHSAENIIFFERTLSAKLYMRYFDIYAMTSLSEGFGLAAVEAALEGCHLI
                     CSNIDTFKELFGENCSYFELEKPSSLVDAIENAELKTGNKLLSYVREKFSGENMLKGY
                     LRIYYSNDKKK"
     gene            22014..23099
                     /gene="wzy"
                     /locus_tag="OQQ26_000658"
     CDS             22014..23099
                     /gene="wzy"
                     /locus_tag="OQQ26_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_158645904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O112ac family O-antigen polymerase"
                     /protein_id="HCS1856232.1"
                     /translation="MIKKNNIYRFYILVCVFSGFYIFGFFPAPYYLCLILGFVFLSLS
                     KIKHVDKNILFLLCIVIIYMVFMLFNSRINVWSYYFIGLLTYFIIILLRNNLDNYQKI
                     AIVRKTVLISLLLVILDTIYRFYYPREEYLLAIEQQGKIDYLFYGYKHSFLFQDSNFV
                     GLYILSVFFLFRDNMSIFKWKKSILLTIIILIILSLSRAAIVALILTECIRMLCGMKV
                     DVRLKIVSLIFMAIPTIYLLFVLVANIDDTSFESKFMLLNKFLTTFQERNFTELLFGW
                     GLDNTREHWGIAAHSLFNTLLLEMGLVGFIIITISIVYCWCLNTKTLYHFMGLSIAFL
                     SFGLIFTPFFIPLGLNIIMRDVSNEKL"
     gene            23077..24138
                     /locus_tag="OQQ26_000659"
     CDS             23077..24138
                     /locus_tag="OQQ26_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005010700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HCS1856233.1"
                     /translation="MCRMKNYDIIFISGSHQIYGGGQVFIDEINKKLSSQGIKSIILA
                     SDDIFDNSLNIPRVDTWKYKIKNYKKLLEILNEIDCNRKAKIITNDITLSMLAVILRF
                     NGWKIYPLIHMSLYNTSSNYKFIKFLYPYIRGFLIRMASEKILSVNKENDRILGKKVC
                     YIGNFTVNKQDSIQSINVDKNIDLLYVGRFDIEKRPDRFINIVQYLLQRGRPVRATMV
                     GSGKYYDQIRKYVHENNLSDYINLMGFLDKEKIIPLYKRSRMLVITSKTEGLPTVILD
                     AAVYGVNFISPPIGSIPYLHKNWNVGHIVDIHNMGEYIDQRWDILINKVSDMQLTMFA
                     QEHFIDSFILKFMDSLYEG"
     gene            24128..25012
                     /locus_tag="OQQ26_000660"
     CDS             24128..25012
                     /locus_tag="OQQ26_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCS1856234.1"
                     /translation="MKVKYSIVVPLYNKSSYIKDTLESICHQLTIDTEVIIIDDGSTD
                     DSVSIVEEFIHKYQQIKLFCFENKGVSEARNRGLKNANGDYVIFVDADDIINEGYVND
                     IIKTVNTIPEQFDILGYNYIRGGVPVIPNHVKDGYINYFELYLKYGPPFCSSSVVIAK
                     NKLSDLQLFPEGEWLGEDIYAWAKIIMGGGKVYFRNFNACNYITDINGAMAKQKTKIK
                     LIRKDNEIKIDDPKFDLFINYHKRDYLKSCLIFGDKNSLRQYIKNESSANILFYKILS
                     YLPHALFKFLVCVKRKML"
     gene            25009..25938
                     /locus_tag="OQQ26_000661"
     CDS             25009..25938
                     /locus_tag="OQQ26_000661"
                     /inference="COORDINATES: protein motif:HMM:NF016145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HCS1856235.1"
                     /translation="MTTLLFGYFDLNFGDDWLIHEFINQYHKDNVILVVSDENLYLPF
                     KHDIRFRKVSDLGKIKAFLQSDEICIVGGSMFQDSKHWFGHYLKLYIYLLIARILGKK
                     NYVIGCNLNAIKNKKLNMLLKLLYKQVDHFRVRDSNSVKILNKDYNINEALISVKPDL
                     ADKSKLSLTVTKENSCAVSIINNKNTGKKKYYDWLTSNFKELRRKGIYHFKLFGFDSG
                     AESDEKSINDFLVLKRHLFADCTFTIIIYNGNVDEFIMKWSTSKYALCTRFHSYILAR
                     NCKQNFRVFCYSNKIVEYIKTHSPFEMEYVDVA"
     gene            25922..27349
                     /gene="wzx"
                     /locus_tag="OQQ26_000662"
     CDS             25922..27349
                     /gene="wzx"
                     /locus_tag="OQQ26_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_158231405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O112ac family O-antigen flippase"
                     /protein_id="HCS1856236.1"
                     /translation="MSMLLNLIIPIISFGIVSIMGLIMTPFFINNFGYEGLGLISNSN
                     ALIQSLFFAGGAFTTVYSREYSNAVNNIEKSVLLRELNNILTAIFFIAVLLSIVFYIF
                     YIFKDNFSYNYYALVFLASAIIIISQSFNVFPFAANRLYINSVIDCARTLLRNILCMA
                     LFYLSIDNVLSNGWAMILSAVITLLVLKLVFKENKVFYVGRMSNNYNIKNSFWVCINQ
                     GGAYIFSFADVFLINLMLGHYIGGSYAVLIQIPVLLKSVSVVAIGSISSFTVKVHQRF
                     EKDRTIIKKIINKVVVFFSFFISLAFILVDLYKESFFSIWLPTAVTSSMLKQFNYICI
                     IMMLLSISSLVNIFLVAWGHFIIPAKATVFSAVVSVLVVVLLYFFNYKLSEMIIFSVI
                     YLMLILKNLICYLYFFMQSGLSLIHFIFSLILSFCVITINFLVAKSIRYYIESDFLSI
                     VILFFVMMTISLPLLWDFKKLREYI"
     gene            27370..28392
                     /gene="galE"
                     /locus_tag="OQQ26_000663"
     CDS             27370..28392
                     /gene="galE"
                     /locus_tag="OQQ26_000663"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001101993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HCS1856237.1"
                     /translation="MNVLVTGGLGYIGSHIVVDLLNSQFKVAVVDNLSNSNVNVKNKI
                     EFLTKRKVKFYECDVCDNESINKIFNNNDFYAVIHLAGLKSVAESIQEPVRYYANNLE
                     GTLCVIKNSIKYNVKKFVFSSSATVYGLPERIPLDENCQVGKTINPYGTSKFFSEQIL
                     HDIANANSQIDITILRYFNPVGAHSSMSIGEDPRGIPSNLVPYITKVAAGKLPFLSIF
                     GGDYDTKDGTGVRDYIHVMDLAKGHIAALRMAADSSKSNFHIYNLGTGKGYSVLELVN
                     TFETITGKKINYKICDRRKGDVAECWSDPSLALEELHWKAEKDLSDMLKDAWAWEIRD
                     VIPQEE"
     gene            28502..29908
                     /gene="gndA"
                     /locus_tag="OQQ26_000664"
     CDS             28502..29908
                     /gene="gndA"
                     /locus_tag="OQQ26_000664"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HCS1856238.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIA
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
                     TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIA
                     AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQT
                     FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKDQRVAASKVLSGPQAQSAGDKAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAEDPQIANLLLAPY
                     FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRIDKEGVFHTEWLD"
     gene            30157..31323
                     /gene="ugd"
                     /locus_tag="OQQ26_000665"
     CDS             30157..31323
                     /gene="ugd"
                     /locus_tag="OQQ26_000665"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HCS1856239.1"
                     /translation="MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISP
                     IVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIATPTDYDPKTNYFNTSSVESAIK
                     DVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI
                     GERSERAERFAALLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI
                     VDANRTRKDFIADAILLRKPQVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVII
                     YEPVMKEDSFFNSRLERDLATFKQQADVIISNRMAEELRDVADKVYTRDLFGSD"
     gene            31470..32447
                     /gene="wzzB"
                     /locus_tag="OQQ26_000666"
     CDS             31470..32447
                     /gene="wzzB"
                     /locus_tag="OQQ26_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310855.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HCS1856240.1"
                     /translation="MRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIAL
                     AIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGPAVPKVSDIQASLIGRYSTA
                     FSALAETLDNQEKSEKLTIEPTVKNQPLPLAVSYVGETPEGAQKQLAKYIQQVDDQVN
                     EELEQDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQ
                     QTEDVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIENLKVDDLDIHA
                     YRYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK"
     gene            complement(32544..33155)
                     /locus_tag="OQQ26_000667"
     CDS             complement(32544..33155)
                     /locus_tag="OQQ26_000667"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HCS1856241.1"
                     /translation="MLTEQQRRKLDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK
                     TIESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTS
                     SCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ"
     gene            complement(33149..33925)
                     /gene="hisF"
                     /locus_tag="OQQ26_000668"
     CDS             complement(33149..33925)
                     /gene="hisF"
                     /locus_tag="OQQ26_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HCS1856242.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
                     DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKVSI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL
                     DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
     gene            complement(33907..34644)
                     /gene="hisA"
                     /locus_tag="OQQ26_000669"
     CDS             complement(33907..34644)
                     /gene="hisA"
                     /locus_tag="OQQ26_000669"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HCS1856243.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAE
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
                     STAVKSPDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTG
                     VRGVIVGRALLEGKFTVKEAIACWQNA"
     gene            complement(34644..35234)
                     /gene="hisH"
                     /locus_tag="OQQ26_000670"
     CDS             complement(34644..35234)
                     /gene="hisH"
                     /locus_tag="OQQ26_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HCS1856244.1"
                     /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL
                     PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
                     EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
     gene            complement(35234..36301)
                     /gene="hisB"
                     /locus_tag="OQQ26_000671"
     CDS             complement(35234..36301)
                     /gene="hisB"
                     /locus_tag="OQQ26_000671"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HCS1856245.1"
                     /translation="MSQKYLFIDRDGTLISEPPNDFQVDRFDKLAFEPGVIPELLKLQ
                     KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
                     CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDREALNWPMIGE
                     QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI
                     NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            complement(36298..37371)
                     /gene="hisC"
                     /locus_tag="OQQ26_000672"
     CDS             complement(36298..37371)
                     /gene="hisC"
                     /locus_tag="OQQ26_000672"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HCS1856246.1"
                     /translation="MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
                     FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA
                     ILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTG
                     QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
                     AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIIAMRERVAQIIAER
                     EYLITALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL
                     RITVGTREESQRVIDALRAEQVL"
     gene            complement(37368..38672)
                     /gene="hisD"
                     /locus_tag="OQQ26_000673"
     CDS             complement(37368..38672)
                     /gene="hisD"
                     /locus_tag="OQQ26_000673"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HCS1856247.1"
                     /translation="MSFNTIINWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
                     ARGDDALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ
                     KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLC
                     SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
                     RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPDGD
                     MARRVAEAVERQLAELPRAETARQALSASRLIVTNDLTQCVEISNQYGPEHLIIQTRN
                     ARDLVDGITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
                     QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA"
     gene            complement(38678..39577)
                     /gene="hisG"
                     /locus_tag="OQQ26_000674"
     CDS             complement(38678..39577)
                     /gene="hisG"
                     /locus_tag="OQQ26_000674"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HCS1856248.1"
                     /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
                     GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     misc_feature    complement(39624..39747)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(39723..39764)
                     /gene="hisL"
                     /locus_tag="OQQ26_000675"
     CDS             complement(39723..39764)
                     /gene="hisL"
                     /locus_tag="OQQ26_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HCS1856249.1"
                     /translation="MTRVQFKHHHHPD"
     gene            40202..41026
                     /locus_tag="OQQ26_000676"
     CDS             40202..41026
                     /locus_tag="OQQ26_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1856250.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG
                     IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAH
                     RIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
     gene            41072..42001
                     /locus_tag="OQQ26_000677"
     CDS             41072..42001
                     /locus_tag="OQQ26_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1856251.1"
                     /translation="MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESD
                     LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
                     FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQ
                     TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI"
     gene            42216..42278
                     /gene="yoeI"
                     /locus_tag="OQQ26_000678"
     CDS             42216..42278
                     /gene="yoeI"
                     /locus_tag="OQQ26_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HCS1856252.1"
                     /translation="MGQFFAYATVITVKENDHVA"
     gene            42268..43626
                     /gene="plaP"
                     /locus_tag="OQQ26_000679"
     CDS             42268..43626
                     /gene="plaP"
                     /locus_tag="OQQ26_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HCS1856253.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNRTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            43805..44863
                     /gene="yeeE"
                     /locus_tag="OQQ26_000680"
                     /pseudo
     CDS             43805..44863
                     /gene="yeeE"
                     /locus_tag="OQQ26_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416517.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
     gene            44877..45104
                     /locus_tag="OQQ26_000681"
     CDS             44877..45104
                     /locus_tag="OQQ26_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HCS1856254.1"
                     /translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
                     AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
     gene            complement(45147..46574)
                     /gene="sbcB"
                     /locus_tag="OQQ26_000682"
     CDS             complement(45147..46574)
                     /gene="sbcB"
                     /locus_tag="OQQ26_000682"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HCS1856255.1"
                     /translation="MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIG
                     EPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGY
                     NNVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDG
                     LPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLM
                     ALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDS
                     DTLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDAERLGIDRQHCLDNL
                     KVLRENPQVRDKVVAIFAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLP
                     ALDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEYRRQVFTPEFLQGYADELQML
                     AQQYADDKEKVALLKALWQYAEEIV"
     gene            46780..47941
                     /gene="dacD"
                     /locus_tag="OQQ26_000683"
                     /pseudo
     CDS             46780..47941
                     /gene="dacD"
                     /locus_tag="OQQ26_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416514.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase DacD"
     gene            48060..48533
                     /gene="sbmC"
                     /locus_tag="OQQ26_000684"
     CDS             48060..48533
                     /gene="sbmC"
                     /locus_tag="OQQ26_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor SbmC"
                     /protein_id="HCS1856256.1"
                     /translation="MNYEIKQEDKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVP
                     KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEISGGQYAVAVARVV
                     GDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH"
     gene            48731..49789
                     /locus_tag="OQQ26_000685"
     CDS             48731..49789
                     /locus_tag="OQQ26_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1856257.1"
                     /translation="MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPE
                     STWPLVTMVVIMGPISFWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCA
                     AAMFLCGWLALGKKPYQGLLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTG
                     IWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIA
                     PASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQ
                     QILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNME
                     TAHQLELLSNLICRALRK"
     gene            49961..50290
                     /locus_tag="OQQ26_000686"
     CDS             49961..50290
                     /locus_tag="OQQ26_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310836.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HCS1856258.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE
                     MKNGEAK"
     gene            complement(50391..50687)
                     /locus_tag="OQQ26_000687"
                     /pseudo
     CDS             complement(50391..50687)
                     /locus_tag="OQQ26_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585847.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization protein"
BASE COUNT        13185 a        11422 c        12647 g        13570 t
ORIGIN      
        1 tagcggggga tgattttacc attcgccacg gcgtcactat cggcaatcgt ggtgccgata
       61 acatggcatg tccacacatt ggcaacggcg tcgaactcgg tgccaacgtc attattcttg
      121 gtgatatcac gcttggtaac aacgtcaccg tgggcgcggg cagcgtggtg ctcgactctg
      181 tcccggacaa cgcgctggtg gtgggagaaa aagcgcgagt gaaggtaatt aaatgaatat
      241 tctgcaattt aatgtgcgac tggcggaagg cggggcggca ggtgtggcgt tagatctcca
      301 ccagcgtgcg atgcaacagg ggctggcgtc acattttgtc tacggctacg gcaaaggcgg
      361 caaagagagc gtcagccatc agaactatcc gcaggtcatc aaacatacgc cgcggatgac
      421 cgcaatggcg aatattgccc tgtttcgtct gtttaatcgc gatctgtttg gcaatttcaa
      481 tgagttatat cgcaccatta ctcgcacacc gggcccggtg gtcctgcatt ttcatgtgct
      541 gcacagctac tggctaaatc ttaagagcgt ggtgcgcttt tgcgaaaagg tgaaaaacca
      601 taaaacggac gtcactctgg tctggacgct gcacgaccac tggagcgtta ccggacgctg
      661 cgcctttacc gacggttgcg aaggctggaa aacgggctgc cagaaatgcc cgaccttaaa
      721 taattatccg ccggtgaaga ttgatcgcgc acaccaactg gtggcgggca aacgccagtt
      781 attccgtgag atgctggcgc tgggctgtca gtttatttcc cccagccagc atgtggctga
      841 tgctttcaat agcctgtacg gtccagggcg ttgccggatt atcaataacg gtattgatat
      901 ggcaaccgaa gcgattctgg cggatctgcc tccggtgcgc gaaactcagg gcaagccgaa
      961 aatcgcggtg gtagcgcatg acctgcgtta cgacggcaaa actaaccagc acttggtgcg
     1021 cgagatgatg gcgctggacg acaaaatcga actgcatacc ttcggtaagt tctcgccgtt
     1081 caccgctggc aacgtggtta atcacggctt tgaaactgac aagcgcaagt tgatgagcgc
     1141 gctcaatcag atggatgcgc tggtattcag ttctcgcgtc gataactacc cgctgatttt
     1201 gtgtgaggcg ctatcgattg gtgtgccggt gattgccacc catagcgacg cggcgcggga
     1261 agtgctgcaa aaatccggtg gtaaaaccgt cagcgaagaa gacgtgctac aactggtgca
     1321 gttaagcaaa ccggaaatcg cgcaggcgat atttggtacc acgttggccg ggttcagcca
     1381 gcgcagccgc gccgcctaca gtggacaaca gatgctggag gagtatgtca acttctatca
     1441 gaatctgtag ctacctgctg ctgccgctga tctacctgct ggttaacgtc aaaatcgccc
     1501 agcttggtga aagtttcccc atcactatcg tcactttttt acctgtcttg ttactgctgt
     1561 ttttagaacg catcagcgtt aaaaaattga tgattgcctt agggattggt gcgggactca
     1621 cggcgtttaa ctacctgttt ggtcagtcgc tggatgccag taaatacgtc acatcaacca
     1681 tgctgtttgt ctatattgtg atcattattg gcatggtgtg gagtattcgt tttaaaacaa
     1741 tttcgccaca caaccatcgc aagatattac gtttctttta tctggtggtc gggctggtgg
     1801 tggcgctggc ggcagtggag atggcgcaaa ttatcctcac cggtagcagc agtattatgg
     1861 agtcgatttc gaaatatctg atttacagca acagctatgt actgaatttc attaaattcg
     1921 gcggtaagcg cacgacagca ctttatttcg aaccggcatt tttcgctctg gcattaatct
     1981 caatttggct cagcatcaaa cagtttggta tcaaaacgcc taaaaccgat gctatgattc
     2041 tcgcagggat aatattatcc ggatcgtttt caggggttat gacctttatc ctgttttatt
     2101 tgctggagtg ggcatttcaa tatctgaata aagaggcgat taagaaaaag ttaccgttag
     2161 cattgatttc tctggctgta ttcctggttg gtatggtaat cgcgtttcct tatatttcca
     2221 cccgtctggg cgatttaggt acggaaggat cgtcatcgta ttatcgtatt gtcggtccgc
     2281 tggtgatggt cggttattct ttgacccata ttgacggtgt agtcagattt ggctcacttt
     2341 atgaatatgt cgcatcattc ggaatattta acggtgcgga tgtcggaaaa accatagaca
     2401 atggtttgta tctgctgatt atttattttt cctggtttgc ggtgttttta tcgctgtggt
     2461 acatggggaa agtgataaaa atgatgatca acgcttttgg tgataaccgc aattttcgcg
     2521 tgcaattata tctttttact ccggtttcgc tgttttttac cggttcgata tttagcccgg
     2581 aatatgcatt tttaatcgtc tgtccgttta ttttgcgaaa agcgttaaat attacgaggt
     2641 aagaataaga acatgttgct tagcataatc actgtcgcgt ttcgtaacct cgaagggata
     2701 gtcaaaacac atgcctcgct ggcgcatctg gcgcaggcgg acgatatcag cttcgaatgg
     2761 attgttgtcg atggcggttc caatgacggc acccgtgagt atctggaaaa tctcaatggt
     2821 atctataacc tacgctttgt cagcgagcca gataacggta tctacgacgc catgaacaaa
     2881 ggcattacga tggcacaagg caagttcgcg ttgtttctca attcgggcga tatttttcat
     2941 caggatgccg caaattttgt ccgtaattta aaagtgcaaa aagataacgt gatgatcacc
     3001 ggcgatgcgc tgctggattt tggcgacggg cataaaatta aacgtagcgc caaaccgggc
     3061 tggtatattt atcacagcct gcccgccagt catcaggcga tatttttccc ggtatccggc
     3121 ttgaagaaat ggcgttatga cctggaatat aaagtttctt ccgactacgc gctggcagcc
     3181 aaaatgtata aagccggtta tgcatttaaa aaactcaatg gcctggtgtc tgaattttcc
     3241 atgggtgggg tatctaccac caataatatg gaattgtgtg ctgacgcgaa aaaagtccaa
     3301 cggcaaatat tacatgtacc tggcttttgg gctgaattat cctggcattt acgccaacgt
     3361 actacctcaa agacgaaagc cttatataac aaaagctgaa tataagggaa aacgatgcaa
     3421 gatttaagtg gattctcggt gccgaaaggg ttccggggcg gcaacgctat taaagtgcaa
     3481 ttatggtggg cagtacaggc aacaatattt gcctggtcgc cacaagtatt gtatcgctgg
     3541 cgggcttttt tattacgttt attcggcgca aaaataggaa aaaacgtagt tattcgtccg
     3601 tcagtaaaaa ttacctatcc gtggaaatta accttaggtg attacgcgtg ggtcggcgat
     3661 gacgtcaatt tatataccct cggtgaaata accattggcg cacattcggt gatatcgcaa
     3721 aaaagttatt tatgcaccgg tagccacgac catgcaagtc aacatttcac cattaacgcc
     3781 acgcctattg tgattggcga gaaatgctgg ctggcgacag atgtttttgt tgcccctggc
     3841 gtcacgattg gcgacggcac cgtcgtgggt gcacgaagca gtgtttttaa atcgcttccg
     3901 gcaaatgtgg tttgccgggg gaatcccgca gtggtgatac gcgaacgcgt tgaaactgaa
     3961 taaattcaaa aaatacagag gaataagaca tgtcaaaagt cgctctcatc accggtgtaa
     4021 ccggacaaga cggttcttac ctggcagagt ttctgctgga aaaaggttac gaggtgcatg
     4081 gtattaagcg tcgcgcatcg tcattcaaca ccgaacgcgt ggatcacatt tatcaggatc
     4141 cgcacacctg cgacccgaaa ttccatctgc attatggcga cctgagtgat acctccaacc
     4201 tgacgcgcat tttgcgtgaa gtacagccgg atgaagtgta caacctgggg gcaatgagcc
     4261 acgttgcggt ttcttttgag tcaccggaat ataccgctga cgtcgacgcg atgggtacgc
     4321 tgcgcctgct cgaggcgatc cgcttcctcg gtctggaaaa gaaaacccgt ttctatcagg
     4381 cttccacctc tgaactgtac ggtctggtgc aggaaattcc gcagaaagaa accacgccgt
     4441 tctacccgcg atctccgtat gcggtcgcca aactgtacgc ctactggatc accgttaact
     4501 accgcgaatc ctacggcatg tacgcctgca acggtattct cttcaaccat gaatccccgc
     4561 gccgtggcga aaccttcgtt acccgcaaaa tcacccgcgc aatcgccaac atcgcccagg
     4621 ggctggagtc gtgcctgtac ctcggcaata tggattccct gcgtgactgg ggccatgcca
     4681 aagactacgt aaaaatgcag tggatgatgc tgcaacagga acagccggaa gatttcgtta
     4741 tcgcgaccgg cgttcagtac tccgtacgtc agttcgtgga aatggcggca gcacagctgg
     4801 gcatcaaact gcgctttgaa ggcacgggcg ttgaagagaa gggcattgtg gtttccgtca
     4861 ccgggcatga cgcgccgggc gttaaaccgg gggatgtgat tatcgccgtt gacccgcgtt
     4921 acttccgtcc ggctgaagtt gaaacgctgc tcggcgaccc gaccaaagcg cacgaaaaac
     4981 tgggctggaa accggaaatc accctcagag agatggtgtc tgaaatggtg gctaatgacc
     5041 tcgaagcggc gaaaaaacac tctctgctga aatcttacgg ctacgacgtg gcgatcgcgc
     5101 tggagtcata agcatgagta aacaacgcat ttttattgct ggccatcgcg ggatggttgg
     5161 ttccgccatc aggcggcagc tcgaacagcg cggtgatgtg gagctggtat tacgcacccg
     5221 cgacgagctg aacctgctgg acagccgcgc cgtgcatgat ttctttgcct gcgaacgtat
     5281 tgaccaggtc tatctggcgg cggcgaaagt gggcggcatt gttgccaaca acacctatcc
     5341 ggcggatttc atctaccaga acatgatgat tgagagcaac atcattcacg ccgcgcatca
     5401 gaacgacgtg aacaaactgc tgtttcttgg atcgtcctgc atctacccga aactggcaaa
     5461 acagccgatg gcagaaagcg agttattgca gggcacgctg gagccgacca acgagcctta
     5521 cgccattgcc aaaatcgccg ggatcaaact gtgcgaatca tacaaccgcc agtacggacg
     5581 cgattaccgc tcagtcatgc cgaccaacct gtatggcccg catgacaact tccacccgag
     5641 taattcgcat gtgatcccag cattgctgcg tcgcttccac gaggcgacgg cacagaatgc
     5701 gccggacgtg gtggtgtggg gcagcggtac accgatgcgc gaatttctgc acgtcgatga
     5761 tatggcggcg gcaagcattc atgtgatgga gctggcgcac gaagtctggc tggaaaacac
     5821 ccagccgatg ttgtcgcaca ttaacgtcgg cacgggcgtt gactgcacca tccgtgaact
     5881 ggcgcaaacc atcgccaaag tggtgggtta caaaggtcgg gtggtttttg atgccagtaa
     5941 accggatggt acgccgcgca aactactgga tgtgacgcgc ctgcatcagc ttggctggta
     6001 tcacgaaatc tcactggaag cggggcttgc cagcacttac cagtggttcc ttgagaatca
     6061 agaccgcttt cgggggtaat gatgttttta cgtcaggaag actttgccac ggtagtgcgc
     6121 tccacaccgc ttgtctctct cgactttatt gtcgagaaca gtcgcggcga gtttctgctt
     6181 ggcaaaagaa ccaaccgccc ggcgcagggt tactggtttg tgccgggagg cgcgtgcaga
     6241 aagacgaaac gctggaagcc gcatttgagc ggctgacgat ggcggaactg gggctgcgtc
     6301 tgccgataac agcaggccag ttttacggtg tctggcagca cttttatgac gataactcct
     6361 ccggcacgga tttcaccact cactatgtgg tgctcggttt tcgcttcaga gtcgctgaag
     6421 aagatctgtt actgccggat gagcagcatg acgattaccg ctggctgacg ccggacgcgc
     6481 tgctcgccag taacgatgtt cacgctaaca gccgcgccta ttttctcgct gagaagcgtg
     6541 ccggagtacc cggattatga aaatactggt ctacggcatt aactactcgc cggagttaac
     6601 cggcatcggc aaatacaccg gagagatggt ggaatggctg gcggcacaag gtcatgaggt
     6661 gcgggttatt accgcaccgc cttactaccc gcaatggcag gtgggcgaga actattccgc
     6721 ctggcgctac aaacgagaag agggggccgc cacggtgtgg cgctgcccgc tgtacgtgcc
     6781 aaaacagccg agcaccctga aacgcctgtt acatctcggc agttttgccg tcagcagttt
     6841 ctttcctctg atggcgcaac gtcgctggaa gccggatcgc attatcggcg tggtgccaac
     6901 gctgttttgc acgccgggaa tgcgcctgct ggcgaagctc tctggtgcgc gtaccgtgct
     6961 gcatattcag gattatgaag tggacgccat gctggggctg ggccttgccg gaaaaggcaa
     7021 aggcggcaaa gtggcacagc tggcgacggc gttcgaacgt agcggactgc ataacgtcga
     7081 taacgtctcc acgatttcgc gctcgatgat gaataaagcc atcgaaaaag gcgtggccgc
     7141 ggaaagcgtc atcttcttcc ccaactggtc ggaaattgcc cgttttcagc atgtcgcaga
     7201 ggccgatgtt gatgcccttc gtaaccaact tggcctgccg gataacaaaa aaatcattct
     7261 ttactccggc aatattggtg aaaagcaggg gctggaaaac gttattgaag ctgccgatcg
     7321 cctgcgcgat gaaccgctga tttttgccat tgtcgggcag ggcggcggca aagcgcggct
     7381 ggaaaaaatg gcgcaacagc gtggtctgcg caacatgcaa ttttttccgc tgcaatcgta
     7441 tgacgcttta cccgcactgc tgaagatggg cgattgccat ctggtggtgc aaaaacgcgg
     7501 cgcggcagat gccgtattgc cgtcgaaact gaccaatatt ctggcggtag gcggtaacgc
     7561 ggtgattact gcagaagccc acacagaact gggacagctt tgcgaaacct ttccgggtat
     7621 tgcggtttgc gtggaaccgg aatcggtcga ggcgctggtg gcggggattc gtcaggcgct
     7681 cctgctgccc aaacacaaca cgatggcacg tgaatatgcc gaacgcacgc tcgataaaga
     7741 gaacgtgtta cgtcaattta taaatgatat tcggggataa ttatggcgca gtcgaaactc
     7801 tatccagttg tgatggcagg tggctccggt agccgcttat ggccgctttc ccgcgtactt
     7861 taccccaagc agtttttatg cctgaaaggc gatctcacca tgctgcaaac caccatctgc
     7921 cgcctgaacg gcgtggagtg cgaaagcccg gtggtgattt gcaatgagca gcaccgcttt
     7981 attgtcgcgg aacagctgcg ccaactgaac aaactcaccg agaacattat tctcgaacca
     8041 gcagggcgta acactgcacc agccattgcg ctggcggcgc tggcggcaaa acgtcatagc
     8101 ccggagagcg acccgttaat gctggtattg gcggcggatc atgtgattgc cgatgaagac
     8161 gcgttccgtg ccgccgtgcg taatgccatg ccatatgccg aagcgggcaa gctggtgacc
     8221 ttcggcattg tgccggatct accagaaacc ggttatggct atattcgtcg cggtgaagtg
     8281 tctgcgggtg agcaggatac ggtggccttt gaagtggcgc agtttgtcga aaaaccgaat
     8341 ctgcaaaccg cccaggccta tgtggcaagc ggcgaatatt actggaacag cggcatgttc
     8401 ctgtttcgcg ccggacgcta tctcgaagaa ctgaaaaaat atcgcccgga tattctcgac
     8461 gcctgtgaaa aagcgatgag cgccgtcgat ccggatctcg attttattcg tgtggatgaa
     8521 gaagcgtttc tggcctgccc tgaagagtcg gtggattacg cggtcatgga acgtacggca
     8581 gatgccgttg tggtaccgat ggatgcgggc tggagcgatg tcggttcctg gtcctcttta
     8641 tgggagatca gcgcccacac cgccgagggc aacgtttgcc acggcgatgt gattaatcac
     8701 aaaactgaaa acagctatgt gtatgccgaa tctggcctgg tcaccaccgt cggggtgaaa
     8761 gatttggtgg tagtgcagac caaagatgcg gtgctgattg ccgaccgtaa cgcggtgcag
     8821 gatgtgaaaa aagtggtcga gcagatcaaa gccgatggtc gccatgagca tcgggtgcat
     8881 cgcgaagtct atcgcccgtg gggcaaatat gactctatcg acgcaggcga ccgctaccag
     8941 gtgaaacgca tcaccgtgaa accgggcgag ggcttgtcgg tacagatgca ccatcaccgc
     9001 gcggaacact gggtggttgt cgcgggaacg gcaaaagtca ccattgacgg tgatatcaaa
     9061 ctgcttggtg aaaacgagtc catttatatt ccgctggggg cgacgcactg cctggaaaac
     9121 ccagggaaaa ttccgctcga tttaattgaa gtgcgctccg gctcttatct cgaagaggat
     9181 gatgtggtgc gcttcgcgga tcgctacgga cgggtgtaaa cgtcgcatta ggcaatgaat
     9241 gcgaaaccgc ggtgtaaata acgacaaaaa caaaattggc cgcttcggtc agggccaact
     9301 attgcctgaa aaaaggtaac gatatgaaaa aattaacctg ctttaaagcc tatgatattc
     9361 gcgggaaatt aggcgaagaa ttgaatgaag atattgcctg gcgcattggt cgcgcttatg
     9421 gcgaatttct caaaccgaaa accattgtat taggcggtga tgtccgcctc accagcgaaa
     9481 ctttaaaact ggcgctggca aaaggtttac aggatgcggg cgttgacgtg ctggatattg
     9541 gtatgtccgg caccgaagag atctatttcg ccacgttcca tctcggcgtg gatggcggca
     9601 ttgaagttac tgccagccat aatccgatgg attacaacgg catgaagctg gtgcgcgaag
     9661 gggctcgccc gatcagcggt gataccggac tgcgcgacgt ccagcgtctg gctgaagcca
     9721 acgacgttcc tcccgtcgat gaaaccaaac gcggtcgcta tcagcaaatc aacctgcgtg
     9781 acgcttacgt tgatcacctg ttcggttata tcaatgtcaa aaacctcacg ccgctcaagc
     9841 tggtgattaa ctcagggaac ggcgcggcgg gtccggtggt ggacgccatt gaagcccgct
     9901 ttaaagccct cggcgcaccg gtggaattga tcaaagtgca caacacgccg gacggcaatt
     9961 tccccaacgg tattcctaac ccgctactgc cagaatgccg cgacgacacc cgcaatgcgg
    10021 tcatcaaaca cggcgcggat atgggcattg cctttgacgg tgattttgac cgctgtttcc
    10081 tgtttgacga aaaagggcag tttatcgagg gctactacat tgtcggcctg ctggcagaag
    10141 cgttcctcga aaaaaatccc ggcgcgaaga tcatccacga tccacgtctc tcctggaata
    10201 ccgttgatgt ggtgaccgcc gcgggcggca ctccggtgat gtcgaaaacc ggacacgcct
    10261 ttattaaaga acgtatgcgc aaggaagacg ccatctacgg tggcgaaatg agcgcccacc
    10321 attacttccg tgatttcgct tactgcgaca gcggcatgat cccgtggctg ctggtcgccg
    10381 aactggtgtg tctgaaagga aaaacgctgg gcgaactggt gcgcgaccgg atggcggcgt
    10441 ttccggcaag cggtgagatc aacagcaaac tggcgcaacc cgctgaggcg attaatcgcg
    10501 tcgaacagca ttttagccgt gaggcgctgg cggtggatcg taccgatggc atcagtatga
    10561 cctttgccga ctggcgtttt aacctgcgct cctccaacac cgaaccggtg gtgcggttga
    10621 atgtggaatc gcgcggtgat gtgccgctga tggaagcgag aacgcgaact ctgctgacgt
    10681 tgctgaacga gtaatgtcgg atcttccctt accccactgc gggtaagggg ctaataacag
    10741 gaacaacgat gacaaatcta aaaaagcgcg agcgagcgaa aaccaatgca tcgttaatct
    10801 ctatggtgca acgcttttca gatatcacca tcatgtttgc cgggctatgg ctggtttgcg
    10861 aagtcagcgg actgtcattc ctctacatgc acctgttggt ggcgctgatt acgctggtgg
    10921 tgttccagat gctgggcggc atcaccgatt tttatcgttc atggcgcggt gttcgggcag
    10981 cgacagaatt tgccctgttg ctacaaaact ggacgttaag cgtgattttc agcgccggac
    11041 tggtggcgtt caacaatgat ttcgacacgc aactgaaaat ctggctggcg tggtatgggc
    11101 tgaccagtat cggactggtg gtttgccgtt catgtattcg cattggcgcg ggctggctgc
    11161 gtaatcatgg ctataacaag cgcatggtcg cggtggcagg ggatttagcc gccggacaaa
    11221 tgctgatgga gagcttccgt aatcagccgt ggttagggtt tgaagtagtg ggcgtatacc
    11281 acgacccaaa accgggcggc gtttctaacg actgggcggg taatctgcaa cagctggtcg
    11341 aggacgcgaa agcgggcaag attcataacg tctatatcgc gatgcaaatg tgcgacggcg
    11401 cacgagtgaa aaaactggtc catcaactgg cggataccac ctgttcggtg ctgctgatcc
    11461 ccgatgtctt taccttcaac attctccatt cacgtctcga agagatgaac ggcgttccgg
    11521 tggtgccgct gtatgacacg ccactttccg gggttaaccg cctgctcaaa cgtgcggaag
    11581 acattgtgct ggcgacgctt atcctgctgc tgatctcccc ggtgctgtgc tgtattgcgc
    11641 tggcggtgaa actcagttca ccagggccgg ttattttccg ccagactcgc tacggcatgg
    11701 atggcaagcc gatcaaagtg tggaagttcc gttccatgaa agtgatggag aacgacaaag
    11761 tggtgaccca ggcgacgcgg aacgatccgc gcgtcaccaa agtggggaac tttctgcgcc
    11821 gcacctcgct ggatgaactg ccgcagttta tcaatgtgct gaccgggggg gatgtcgatt
    11881 gtcgggccac gtccacacgc ggtggcgcat aacgaacagt atcgacagct cattgaaggc
    11941 tacatgctgc gccataaagt gaaaccgggc attactggct gggcgcagat taatggctgg
    12001 cgcggcgaaa ccgacacact ggagaaaatg gaaaaacgcg tcgagttcga ccttgagtac
    12061 atccgcgaat ggagcgtctg gttcgatatc aaaatcgttt tcctgacggt attcaaaggt
    12121 ttcgttaaca aagcggcata ttgatatgag cttacgtgaa aagaccatca gcggcgcgaa
    12181 gtggtcggcg attgccacgg tgatcatcat cggcctcggg ctggtgcaga tgaccgtgct
    12241 ggcgcggatt atcgacaacc accagttcgg tttgcttacc gtgtcgctgg tgatcatcgc
    12301 gctggcagat acgctttctg acttcggtat cgctaactcg attattcagc gaaaagaaat
    12361 cagccacctt gaactcacca cgctgtactg gctgaacgtt gggctggggc ttgtggtgtg
    12421 cgtggcggtg tttttgttga gtgatgccat tggtgacgtg ctgaataacc cggacctggc
    12481 accgttgatt aaaacattgt cgctggcgtt tgtggtgatc ccccacgggc agcagttccg
    12541 cgcgttgatg caaaaggaac tggagttcaa caaaatcggc atgatcgaaa ccagcgtggt
    12601 gctggcgggc ttcactttta cggtggttag cgcccatttc tggccgctgg cgatgaccgc
    12661 gatcctcggt tatctggtca atagtgcggt gagaacgctg ctgtttggct actatggccg
    12721 caaaatttat cgccccggtc tgcatttctc gctggcgtct gttgcgccga acttacgctt
    12781 tggtgcctgg ctgacggcgg acagcatcat caactatctc aacacctacc tttcaacgct
    12841 cgtgctggcg cgtattctcg gcgcgagcgt ggcagggggg tacaacctgg cgtacaacgt
    12901 ggccgttgtg ccgccgatga aactcaaccc catcatcacc cgcgtgttgt ttccggcgtt
    12961 tgccaaaatt caggacgaca ccgaaaaact gcgcgtcaac ttctacaagc tgctgtcggt
    13021 ggtggggatt atcaactttc cggcactgct cgggctgatg gtggtgtcga ataattttgt
    13081 accgctggta tttggcgaaa agtggaacag cattattccg gtactgcaat tgctgtgtgt
    13141 ggtggggctg ctgcgttcgg taggtaaccc gattggttcg ctactgatgg cgaaagcgcg
    13201 ggtcgatatc agctttaaat tcaacgtatt caaaaccttt ctgtttattc cggcgattgt
    13261 tataggtggg cagatggccg gcgcaatcgg cgtcacgctc ggcttcctgc tggtgcagat
    13321 tatcaacacc attctgagtt acttcgtgat gattaaaccg gttcttggtt ccagttgtcg
    13381 ccagtacatc ctgagtttat ggctgccgtt ttatctctcg ctgccgacgc tggtggtcag
    13441 ttatgcgctg ggcattgtgc tgaaagggca actggcgctg gggatgcttt tggcggtgca
    13501 aatagctgcg ggcgtgttgg cgtttgtggt gatgattgtg ctgtcgcgcc atccgctggt
    13561 ggtggaagtg aagcgtcagt tttgtcgcag cgaaaaaatg aaaatgcttt tacgggcggg
    13621 gtgaatggtt gttttaggct ccgacaacgg ttgccgggtg cagcgtaaaa cgccttatcc
    13681 atcctacggt tctgtgctcg ggacctgtag gcctgataag acgcgtcagc gtcgcatcag
    13741 gcaaaaagcg gcaacgaaca aaacaaacac agcctcactt ggcatcaaat ttatgaggaa
    13801 aaaatgaaat tacttattct gggcaaccac acttgcggca attgtggcga cagcgccatc
    13861 ttgcgcggct tacttgatgc catcaacatc ctcaatccac aagccgaagt ggacgtgatg
    13921 agccgctatc cggtcagttc ttcctggcta ctcaaccgcc cggtaatggg cgatcctctg
    13981 ttcctgcaaa tgaaacaaca caacagcgcg gcgggcgttg tcgggcgcgt taaaaaagtc
    14041 ctccgtcgcc gctatcaaca ccaggtattg ctctcatgcg tcaccgacac tggcaagctg
    14101 cgtaatatcg ccatcgccca gggattcacc gacttcgtgc gcctgctctc aggttacgac
    14161 gccattattc aggtcggagg atcgtttttt gtcgatctct acggcgtgcc gcagtttgaa
    14221 catgcgcttt gcacgtttat ggcgaaaaag ccgctgttta tgattggtca cagtgttggt
    14281 cccttccagg atgagcaatt taaccaactg gcgaactacg tctttggtca ctgtgactcg
    14341 ctgatcctgc gcgaatcggt cagccttgat ttgatgaaac gcagcaatat cactaccgca
    14401 aaagtggaac atggcgttga taccgcgtgg ctggtcgatc accacacaga agatttcacc
    14461 gccagctatg ccgtccaaca ctggctggac gttgccgcac aacagaaaac ggtggcaatt
    14521 accctgcgcg aactggcacc gttcgacaaa cgtctcggca ccactcaaca agcgtatgaa
    14581 aaagcctttg ccggggtggt aaatcgcatt ctcgacgaag ggtatcaggt gattgcgctc
    14641 tccacctgta cgggcatcga cagctataac aaagacgacc gcatggtggc gctcaacctg
    14701 cgccagcaca tcagcgatcc tgcccgttac cacgtggtga tggatgaact caacgatctg
    14761 gaaatgggca aaattctcgg agcctgtgaa ctcaccgtcg gtacgcgcct gcactctgcc
    14821 attatctcga tgaatttctc cactccggcg attgccatca actatgaaca taaatccgct
    14881 gggatcatgc aacagttggg actgccagag atggcaattg atatccgtca tttactggac
    14941 ggcagcctgc aagcgatggt tgcggatacc ttaggccagc ttccggcgct gaacgcacga
    15001 cttagcgaag ccgtcagtcg cgaacgtcag acgggaatgc agatggtgca atctgtgctt
    15061 gagcgcatcg gggaggtgaa atgaaggtcg gcttcttctt actgaaattt ccgctgtcgt
    15121 cggaaacctt cgtcctcaat caaattaccg cgtttattga tatgggattt gaggtggaga
    15181 ttgtcgcgtt gcaaaaaggc gatacagaga atacccacgc gacttggacg aaatacaacc
    15241 ttgctggcag aacccgctgg ttacaggacg aacctacggg caaagtggcg aaactgcgcc
    15301 accgcgccag ccagacctta cgtggcattc atcgtaaaaa tacctggcag gcgctcaacc
    15361 tcaaacgcta tggcgccgag tcgaggaacc tgattttgtc tgccatttgt ggtcaggtcg
    15421 caacaccgtt tcatgccgat gtctttatcg ctcattttgg ccctgcgggg gtaaccgcag
    15481 caaaactacg cgaactgggt gtcattcgcg gcaaaattgc cactattttc cacggcattg
    15541 atatttccag tcgggaagtg ctcaaccatt acactcccga atatcagcaa ctgtttcgcc
    15601 gtggcgacct gatgttaccg ataagtaatc tgtgggccgg aaggctgcaa aaaatgggct
    15661 gccccagaga aaaaatcgcc gtatcgcgta tgggcgtgga catgacgcgc tttagcccgc
    15721 gtccggtgaa agcacccgca acgccgctgg aaatcatttc cgtcgcacgc ttaaccgaga
    15781 aaaaaggtct gcatgttgcg attgaagcct gccgtcagtt gaaagagcag ggcatggcat
    15841 ttcgctatcg catcctcggc attggcccgt gggaacgacg cctgcgtacc ctcatcgaac
    15901 aatatcaact cgaagatgtg gtggagatgc tgggctttaa accgagccac gaagtgaaag
    15961 cgatgctcga cgacgcggat gtcttcctgt tgccatcggt aacgggcgcg gatggcgata
    16021 tggaaggcat tccggtggca ctaatggaag cgatggcggt cggcattccg gtggtttcta
    16081 ctctgcatag cggaatacag gaactggtgg aggctgacaa atccggctgg ctggtgcctg
    16141 agaacgatgc tcgcgcactg gcacaacgtc tggcggcatt tagccaactg gacaccgacg
    16201 aactggctcc ggtcgtcaaa cgtgcgcgcg aaaaagtcga acacgatttt aaccagcagg
    16261 tgattaaccg agaactcgcc agcttgttgc aggctttata gaggagaacg catgccattt
    16321 aaaaaactct cccgacgcac ctttctgacg gcaagctcgg cgcttgcctt cctccatacc
    16381 ctcttcgccc gcgcacttcc tgcccgacaa agcgttaaca ttaacgacta caaccctcac
    16441 gactggatcg cctcatttaa acaagccttc agcgaagggc aaacggtcgt cgtgcctgct
    16501 ggattcgttt gtgacaatat caacaccggc atcttcattc ctcctggcaa aacgttacac
    16561 atccttggaa gcctgcgcgg caacggcaga gggcgatttg tcttacagga cggcagccag
    16621 gtgacagggg agaagggcgg cagtatgcat aacatcaccc tggatgtgcg cggctctgac
    16681 tgcaccatca aagggctggc gatgagcggc tttggcccgg taacgcagat ttatattggc
    16741 ggcaaaaaca aacgagtcat gcgtaacctg accatcgata acctgaccat cgataacctg
    16801 accgttagcc acgctaatta cgccatctta cgccagggat ttcataacca gattatcggt
    16861 ggcaacatca ccaactgtaa gttcagcgac ttacagggcg acgctattga atggaacgtg
    16921 gcgattaacg accatgatat tttgatatct gaccatgtca tcgagcgcat caactgtact
    16981 aacggcaaaa tcaactgggg catcggcata ggccttgcgg ggagtactta tgataataac
    17041 tacccggaag accaggcagt gaaaaacttt gtcgtggcga atatcacggg atcggattgt
    17101 cggcagttga tccatgttga aaatggtaaa cattttgtta ttcgtaatat caaagcctgc
    17161 aatatcacgc cggatttcag taagaaagca ggtattgata acgcgacggt cgctatttac
    17221 ggttgtgaca atttcgtgat tgataatatt gaaatgatta atagcgctgg gatgttaatc
    17281 ggctatgggg taattaaagg caaatatctc tcaataccgc aaaatttccg agtgaataat
    17341 attcaaatgg ataacaccca tcttgcttat aaattgcgcg gtatccaaat ctctgccggg
    17401 aatgctgtct cctttgtggc gctgactaac attgagatga agcgtgcgtc gctggagtta
    17461 cacaacaaac cgcaacatct ttttatgcga aatatcaagg tgatgcagga atcctcagtt
    17521 ggaccagcat tgagcatgaa cttcgacatg cgcaaagacg ttcgcggcgt ctttatggcg
    17581 aaaaaagaaa cactgctgtc acttgcaaat gttcatgcgg tgaatgaaaa aggacaaagc
    17641 tccgtcgata tcgacagagt taatcaccat attgttaatg tggaaaagat taactttaga
    17701 ttgccggaac ggagggagta gatttgcgac cattcataaa cttactggat ataatgttct
    17761 aaaagattat aatcctcaca ctaactgtta aagctggggc tgggcagcat tgactactca
    17821 gggaaggtac tcatctttat cttgtgtttc ttacgtaaca accagactaa agtgatttat
    17881 gaacgataac gttttgctca taggagcttc cggattcgta ggaacccgac tacttgaaac
    17941 ggcaattgct gactttaata tcaagaacct ggacaaacag cagagccact tttatccaga
    18001 aatcacacag attggcgatg ttcgtgatca acaggcactc gaccaggcgt tagccggttt
    18061 tgacactgtg gtgctactgg cagcggaaca ccgcgatgac gtcagcccta cttctctcta
    18121 ttatgatgtc aacgttcagg gtacccgcaa tgtgctggcg gccatggaaa aaaatggcgt
    18181 taaaaatatc atctttacca gttccgttgc tgtttatggt ttgaacaaac agaaccctga
    18241 cgaaaaccat ccacacgatc ctttcaacca ctacggcaaa agtaagtggc aggcagagga
    18301 agtgctgcgt gaatggtata acaaagcacc aacagaacgt tcattaatca tcatccgtcc
    18361 taccgttatc ttcggtgaac ggaatcgcgg taacgtctat aacttgctga aacagatcgc
    18421 tggcggcaag tttatgatgg tgggcgcagg gactaactat aagtccatgg cttatgttgg
    18481 aaacattgtt gagtttatca agtacaaact gaagaatgtt gccgcaggtt atgaggttta
    18541 taactacgtt gataagccag acctgagcat gaaccagttg gttgctgaag ttgaacaaag
    18601 cctgaacaaa aagatccctt ctatgcactt gccttaccca ctaggaatgc tgggtggata
    18661 ttgttttgat atcctgagca aaattacggg caaaaaatac gctgtcagct ctgtgcgcgt
    18721 gaaaaaattc tgcgcaacaa cacagtttga cgcaacgaaa gtgcattctt caggttttgt
    18781 ggcaccgtat acgctgtcgc aaggtctgga tcgaactctg cagtatgaat tcgttcatgc
    18841 caaaaaagac gacataacgt ttgtttctga gtaatgcaga cgagtcagag aaaaaaagac
    18901 ctggttggac tacgattatt cggaaagagg tactgattaa attatcagta tgtggatttc
    18961 cgagtaatcc gagtaaccca gatgctgatg gtgtgtagtg ttatcgtaag gtttaatcaa
    19021 agttatgcgg aactaagctt tggtatatag ccataacgtt tggctaacct atggcaataa
    19081 tttacgcact atcagccatt tagaggtagg aaaagaatga cgaatttaaa agcagttata
    19141 ccggtagcag gtcttgggat gcatatgttg cctgccacta aggcgattcc caaagagatg
    19201 ctaccgatcg tcgacaagcc aatgattcag tacattgttg acgagattgt ggctgcaggg
    19261 atcaaagaaa tcctcctggt aactcacgcg tccaagaacg cggtcgaaaa ccacttcgac
    19321 acctcttatg aattagaatc tctccttgaa cagcgcgtga agcgtcagct gctggcggaa
    19381 gttcagtcca tctgtccacc gggagtgacc attatgaacg tgcgtcaggg cgaaccttta
    19441 ggtttaggcc actccatttt gtgtgcgcga cctgccattg gtgacaaccc atttgtcgtg
    19501 gtactgccag acgtagtgat cgacgacgcc agcgccgacc cgctgcgcta caaccttgct
    19561 gccatgattg cgcgcttcaa tgaaacgggc cgtagccagg tgctggcaaa acgtatgccg
    19621 ggtgacctct ctgaatactc cgttattcag accaaagagc cgctggatcg tgaaggtaaa
    19681 gtcagccgca ttgttgaatt tatcgaaaaa ccggatcagc cgcagacgct ggactcagac
    19741 atcatggccg ttggtcgcta tgtgctttct gctgatattt ggccggaact tgaacgcact
    19801 cagcctggcg catgggggcg tattcagctg actgatgcca tcgctgaact ggcgaaaaaa
    19861 cagtccgttg atgccatgct gatgacaggt gacagctacg actgcggtaa aaaaatgggc
    19921 tatatgcagg cgtttgtgaa gtatgggcta cgtaacctga aagaaggggc gactttaaga
    19981 aattacatta ccaagaaatt gttaaaaagt gattaagaat gctttaaatt tatgaagttg
    20041 aatagaaatt tttattcaac ttttgtagca tcagacctat tgttattata tataataagt
    20101 ctgaagctaa tgttaattct aaatacaatt ttagacttta ttatgtgatc tggttgcgat
    20161 agccaggggc ggtagcgtgg ggaaataatg gaaccttttt ctgtactaat gtctttatac
    20221 attaaagaaa aaccagaata ttttgaagag tgtcttataa gtctcaaaga tcaaactttg
    20281 atgccaaacg agatcattat tatattagat ggtcaaatta ctacagcatt aaaatccgtt
    20341 atagctaaat ggaaaaaatg tttacctata aaaataattt cattggataa aaatgttggg
    20401 ttgggtaatg ctctaaaatt aggtctgaaa aattgtacct atcgtttggt tgccagaatg
    20461 gacaccgatg atatttgtca tcctcagcga ttcgaaaaac aaattttaca gtttgaaaat
    20521 gataatgatc tcgtgcttgt aggcggcaat atctgcgaat tcaatgaaga cttcagtatc
    20581 aaaattagca aaaaaagggt gccaatcagc cctcaagata ttaaaaaata tgcacaattt
    20641 aggaatcctt ttaatcatat gactgttatg tttgatagat ataaaattat agacgcagga
    20701 agctatagtc atcatttatt tatggaagat tataacttgt ggttacgctg tctcgctaaa
    20761 aattataaaa tgataaattt aacagaagat ttagtttatg ttagaggcgg tatttctatg
    20821 ataagaaggc gcaaaggtat aaattacgta aaaagtgaaa ttcaattata taatattaaa
    20881 aaaagattaa aaattgtaag tggtatcaaa ggaataaaga ttctaatttt tagagtatta
    20941 cccagattaa tgcctcaatc gttgttattt atgatttata aaaatagata aaatgaaaat
    21001 tgcaatttta gtaaacagtt tagaaattaa agggcctgtc atagttgcag ttaatttagc
    21061 aaagcaacta tatgaagcgg gcgaagatgt gacattatta tatctgaacg ataaagtaga
    21121 acggattgat acatacggaa taaaaataaa aaaaataaat cttgtaagct tttatatact
    21181 tcgagaattt gacatcattc attctcactc attagcacca gatttattaa atgcatttca
    21241 aagagttatt tttaaaaata ggagcataac cacagttcat aataatatat acacggatct
    21301 ctatccagaa tacactaaac taaaaagcat aatacttaag tccttgtggc aaataagttg
    21361 gtggttcata gatgaaaaaa tttgtataag taagtcatta cttaatcaat atgataatgc
    21421 aaaaaaaaaa ggttggaact atgtatataa ttcaatacgt gacgacaata atttaggact
    21481 gaatgatttt gatttgaatg caattaatgt actaaaaaaa ataaagagag aaggtaaaat
    21541 tatagtagga tcatgtgcgg ttattacaga aagaaaaggc ctacaacatt tagtaagcgc
    21601 tgccagattc ttaccggata aatatagaat tgtgatagtt ggagatggcc cttataaagt
    21661 aaatttaatg aaacatagcg ctgagaatat aatatttttt gagcgaacat tatcagctaa
    21721 actatatatg cgttactttg atatatatgc tatgacttct ttaagtgagg gttttggtct
    21781 tgctgcagtt gaagcagcgt tagaaggttg tcatttaata tgtagtaata ttgatacgtt
    21841 taaagagctg tttggtgaaa actgtagcta ctttgaactc gaaaagccta gtagtttagt
    21901 tgatgctatc gaaaatgctg aattaaagac tggaaataaa ttattatcat acgttagaga
    21961 aaaattcagt ggtgaaaata tgttaaaagg ttacttaagg atatattact caaatgataa
    22021 aaaaaaataa tatttataga ttttatattt tagtatgtgt atttagtggt ttttatatat
    22081 ttggattctt tcctgcccca tactatcttt gtttaatatt ggggtttgtg tttttaagcc
    22141 ttagcaaaat caaacatgtt gataaaaata ttttatttct gttatgcatt gttattatct
    22201 atatggtttt tatgttgttt aactctagaa ttaatgtttg gagttattat tttattggcc
    22261 ttctgactta ttttattatt atcttactaa gaaataatct tgataattat caaaaaattg
    22321 caattgtgag aaagactgtc ttaatctcat tgttacttgt catattggat actatatata
    22381 gattctatta tccgcgagaa gaatatttac ttgcaataga acaacaaggg aaaattgatt
    22441 atctctttta tggatataaa catagctttt tattccaaga cagtaatttc gtaggtttat
    22501 atattttgtc agtttttttt ctgtttaggg ataacatgtc tatctttaaa tggaaaaaaa
    22561 gtatcctatt gacaataata atattaatta ttttatcctt atcaagggcg gcaatagtcg
    22621 cattgatttt aaccgaatgt atacgtatgt tatgtggcat gaaagttgat gtacgattga
    22681 aaattgtgtc attaatattt atggccatac cgacaatata tctcttattt gttttggtag
    22741 ctaatattga tgacacaagt tttgaatcga aattcatgct attaaataaa tttcttacta
    22801 cttttcaaga aagaaatttt actgaattat tatttggatg gggcttagat aatacacgag
    22861 aacactgggg aatagctgct catagtttat ttaatacatt acttctggaa atgggattgg
    22921 tgggattcat tataattacc atatcaatag tatattgttg gtgcttaaac accaaaacgt
    22981 tatatcattt tatggggtta agcatagcat ttctttcatt tggtttgatt tttactccat
    23041 tttttattcc tcttggctta aatataatta tgcgagatgt gtcgaatgaa aaactatgat
    23101 attattttta tctcaggatc acaccaaata tatggaggag gacaggtatt tatagacgaa
    23161 attaataaaa aactatcatc gcaagggatt aaaagtataa ttttagcatc tgatgatata
    23221 tttgataatt cgttaaatat accaagagtt gatacttgga aatataaaat aaaaaattat
    23281 aaaaaattac tggaaattct taatgaaatt gactgtaacc gcaaggcaaa aataatcaca
    23341 aatgacataa cgttatcgat gcttgccgtt atactaagat ttaacggttg gaaaatatat
    23401 cctcttatac atatgagtct gtataacaca tcgagcaatt ataaatttat taagttccta
    23461 tatccttata tccgaggttt tctgatacgt atggcctcag aaaaaatttt atctgttaac
    23521 aaagaaaatg atagaatctt gggtaagaag gtatgttata ttggaaattt tacggttaat
    23581 aaacaagact cgattcaatc tattaatgtc gataaaaata tagatctatt atatgttggc
    23641 cgttttgata tagaaaaacg gccagataga tttattaaca ttgttcaata tttgttacaa
    23701 agaggacgtc ctgtcagggc cacaatggtt ggcagcggaa aatattatga tcaaattaga
    23761 aaatatgtac atgaaaataa tcttagtgat tatataaatt taatgggttt tctagataaa
    23821 gaaaagatca ttccattgta caaaagaagt agaatgttag ttattacaag caaaactgaa
    23881 ggcttaccta ctgtaattct agatgcagct gtgtatggag ttaattttat ttctcctcct
    23941 ataggcagta ttccctattt acataaaaat tggaatgttg gacatattgt tgatattcat
    24001 aatatggggg agtatattga tcagcgatgg gatatattaa ttaataaagt atccgatatg
    24061 caactcacga tgtttgctca agaacacttt attgatagtt ttattcttaa gtttatggat
    24121 agtttatatg aaggttaagt atagcatcgt agtcccgtta tataataaat ctagctatat
    24181 aaaagatact ttagaaagta tatgtcatca attaactatt gatacggagg taataattat
    24241 tgatgatggc tcaactgatg attcagtttc aattgtggaa gaatttatac ataagtatca
    24301 acaaataaaa ttattttgtt ttgaaaataa aggggtgtcc gaggcaagaa atagagggct
    24361 taaaaatgca aatggagatt atgtaatatt tgtagatgct gatgatatta tcaatgaagg
    24421 ctatgttaat gatataataa aaacagttaa tactattccg gagcaatttg atatattagg
    24481 gtataattat attcgcggtg gagtaccagt aatcccaaac catgttaaag atggttatat
    24541 aaattatttt gaattatacc ttaaatatgg ccctcctttt tgttcatctt cagttgttat
    24601 agcaaaaaat aaattgtccg atctacagct atttcctgaa ggagaatggc tgggagaaga
    24661 tatttatgcg tgggcaaaga taattatggg ggggggcaaa gtatatttta gaaacttcaa
    24721 tgcttgcaat tatattacag atataaatgg tgcaatggct aaacaaaaaa ccaaaattaa
    24781 attaataaga aaagataatg aaataaaaat tgacgaccct aaatttgatt tgttcatcaa
    24841 ttatcataaa cgagattatc ttaaaagttg tttgatattt ggagataaaa actcacttcg
    24901 ccagtatatc aaaaatgaat ctagtgctaa tatattgttt tataaaattt tgtcttattt
    24961 acctcatgca ttatttaaat tcttagtgtg tgtaaaaagg aaaatgttat gaccacgcta
    25021 ttatttggct attttgattt aaattttggt gatgattggt taattcatga gtttataaat
    25081 caatatcata aagataacgt aatattagtt gtttctgatg aaaatcttta tttgcctttt
    25141 aaacatgaca ttagattcag aaaagtgagt gatttaggta agattaaagc ttttctacaa
    25201 agtgacgaaa tatgtattgt cggaggatca atgttccagg acagcaaaca ttggttcggt
    25261 cattatttaa aattatatat ttatttactg attgctagaa ttttagggaa aaaaaattat
    25321 gtgattggct gtaacttaaa cgccataaaa aataaaaaac tcaatatgtt attaaaatta
    25381 ttatataagc aagttgacca tttccgtgtg cgagattcaa attcagtaaa aatattaaac
    25441 aaagattaca acataaacga agcattgatt tctgtaaagc cagatcttgc tgataaaagt
    25501 aagttatcat taacagttac gaaagaaaac agttgtgcag tgtcaataat caacaataaa
    25561 aacaccggta aaaaaaaata ttatgattgg ttgacgagta attttaaaga attaagaaga
    25621 aaaggaatat atcatttcaa actatttggt ttcgattctg gggcagagtc agatgaaaaa
    25681 tcaattaatg attttcttgt attaaaacgt catttattcg ctgattgtac tttcacaatc
    25741 attatatata atggcaatgt agatgaattt ataatgaaat ggagtacaag taaatatgct
    25801 ttatgtacga gatttcattc atacatatta gcacggaatt gcaaacagaa tttcagagta
    25861 ttctgttatt ctaacaaaat tgtcgaatat attaaaacgc attctccgtt tgaaatggag
    25921 tatgtcgatg ttgcttaatt taatcattcc gattatttcc tttggaattg tgtcaattat
    25981 ggggttgatt atgaccccat ttttcattaa caattttggc tatgaaggtt tgggattaat
    26041 ctctaattca aacgcgctta ttcaatctct cttttttgct ggaggagcgt tcactactgt
    26101 ttactctaga gagtattcta acgcagttaa taatatagaa aagtctgtcc ttttgcgcga
    26161 attaaataat atattaactg ctatattttt tatagcggta ttacttagta tagtattcta
    26221 tattttttat atttttaaag ataattttag ctacaactat tatgcattag tttttttagc
    26281 atcagccata attataatat cacaatcatt taatgtgttt ccttttgctg caaacaggct
    26341 ttatataaac tcagttattg attgcgccag aacattattg cgtaatatat tatgtatggc
    26401 tttattttat ctaagcattg ataatgtact gtctaatggc tgggcaatga tattatccgc
    26461 agtcatcaca ttattagtcc tgaaactagt tttcaaagaa aataaagttt tttatgttgg
    26521 gagaatgtcc aataattata atattaaaaa ctcattttgg gtgtgtatca atcagggggg
    26581 ggcttatatt ttctcttttg ctgatgtatt cttgataaat ctaatgttag gtcattacat
    26641 tggaggttca tatgcagtgc taatacaaat accagtattg ttaaaatctg tttctgtagt
    26701 ggctatagga agtatatctt cttttaccgt gaaggttcac caaagatttg aaaaagatag
    26761 gacaataata aaaaaaatta taaataaagt ggtggtcttt ttctcttttt ttatttccct
    26821 tgcttttatt ttggttgatc tttataaaga atcttttttt tccatttggt tacctaccgc
    26881 tgttacgtca tcgatgttga aacaatttaa ctatatatgt attatcatga tgttactttc
    26941 tatatcatct ttggtaaata tttttttagt tgcttggggg cactttataa ttccagctaa
    27001 agctacagtt ttttctgctg tggtatcagt tttagttgtg gttttattat attttttcaa
    27061 ctataaacta tctgagatga ttatttttag tgtaatttat ctgatgttaa ttttaaaaaa
    27121 tctgatatgc tatttgtatt tctttatgca gagtggtttg tcattgatac attttatttt
    27181 tagtctcata ctcagtttct gcgtaataac tatcaatttc cttgtggcta aaagtattcg
    27241 gtattatatt gaaagtgatt ttttgtcgat tgtaatatta tttttcgtga tgatgactat
    27301 atctctaccc ttgctctggg attttaaaaa attacgagaa tatatttaac aagttaataa
    27361 gaggtcttta tgaatgtact ggttaccggt ggtttaggtt atattggttc tcatatcgtt
    27421 gtggatttat taaattcaca attcaaggtt gcagttgttg ataatttatc taattctaat
    27481 gttaatgtca aaaataaaat tgagtttctt acaaaaagaa aagtaaaatt ttatgaatgt
    27541 gatgtttgtg ataatgaatc aattaataaa atatttaata ataatgattt ttatgctgta
    27601 atacatttag ctgggctgaa atctgtcgct gaatctatcc aagaacctgt taggtattac
    27661 gcaaataact tagaaggcac actatgtgtt attaaaaact caataaaata taatgtcaaa
    27721 aaatttgttt ttagttcttc tgccactgta tacggcctac ctgaacgaat acctcttgat
    27781 gaaaattgtc aggttggtaa aacgattaat ccttacggca cttcaaaatt tttttctgaa
    27841 caaattcttc acgatattgc taatgcaaac tctcagattg atatcacaat attaagatat
    27901 tttaaccctg ttggtgctca tagttcgatg agcataggtg aagaccccag aggtatacct
    27961 agcaatttag tcccatacat cacaaaagtt gcagccggaa aactaccatt cttatcaata
    28021 tttggcggag attatgatac taaagatgga actggcgtaa gagactatat tcatgtcatg
    28081 gatctcgcca aaggccatat agcagcactg cgaatggcag ctgatagtag taaatccaat
    28141 ttccatatat ataatttggg gacaggtaaa ggatattccg ttcttgaatt ggtaaatacc
    28201 tttgaaacaa taacaggaaa gaaaataaac tataaaatat gtgatagaag gaaaggtgat
    28261 gtggctgaat gctggtcaga tccttcactt gctttagaag agttacactg gaaagccgaa
    28321 aaagatttaa gtgatatgtt aaaagatgct tgggcttggg aaatccgaga tgtaataccg
    28381 caggaagaat aatattatgg ctgtgtgtta aaaactatct ttatattcat tcttaactta
    28441 ttataatact gcatttatac cgttagcaaa gtacggtgtc tatccctgac aggagtaaac
    28501 aatgtcaaag caacagatcg gcgtagtcgg tatggcagtg atggggcgca accttgcgct
    28561 caacatcgaa agccgtggtt ataccgtctc tattttcaac cgttcccgtg aaaagacgga
    28621 agaagtgatt gccgaaaatc caggcaagaa actggttcct tactatacgg tgaaagagtt
    28681 tgttgaatct ctggaaacgc ctcgtcgcat cctgttaatg gtgaaagcag gtgcaggcac
    28741 ggatgctgct attgattccc tcaaaccata tctcgataaa ggcgacatca tcatcgatgg
    28801 tggtaacacc ttcttccagg acaccattcg tcgtaaccgt gagctttctg ccgaaggctt
    28861 taactttatc ggtaccggtg tttctggtgg tgaagaaggt gcgctgaaag ggccttccat
    28921 tatgcctggt gggcagaaag aagcctatga actggttgcg ccgatcctga ccaaaatcgc
    28981 tgcagtggct gaagacggtg agccatgcgt tacctatatt ggtgctgatg gtgcaggtca
    29041 ctatgtgaag atggttcaca acggtattga atacggtgat atgcagctga ttgctgaagc
    29101 ctattctctg cttaaaggtg gcctgaacct ttccaacgaa gaactggcgc agacctttac
    29161 cgagtggaat aacggtgaac tgagcagcta cctgattgac atcaccaaag atatcttcac
    29221 caaaaaagat gaagacggta actacctggt tgatgtgatt ctggatgaag cagcaaacaa
    29281 aggtaccggt aaatggacca gccagagcgc gctggatctc ggcgaaccac tgtcgctgat
    29341 taccgagtct gtgtttgcac gttatatctc ttctctgaaa gatcagcgcg ttgccgcatc
    29401 taaagttctc tctggtccgc aagctcagtc agcaggcgac aaggctgagt tcatcgaaaa
    29461 agttcgccgt gcgctgtatc tgggcaaaat cgtttcttac gctcagggct tctctcagct
    29521 acgcgccgcg tctgaagagt acaactggga tctgaactac ggcgaaatcg cgaagatttt
    29581 ccgtgctggc tgcatcatcc gtgcgcagtt cctgcagaaa atcaccgatg cttatgccga
    29641 agatccgcag atcgctaacc tgctgctggc tccgtacttc aagcaaattg ccgatgacta
    29701 ccagcaggcg ctgcgtgatg tcgttgctta tgcagtacaa aacggtatcc cggttccgac
    29761 cttcgccgct gcggttgcct attacgatag ctaccgtgcc gctgttctgc ctgcgaacct
    29821 gatccaggca cagcgtgact atttcggtgc acatacttat aagcgcattg ataaagaagg
    29881 tgtgttccat actgaatggc tggattaatc tgatttaacc aacaataaaa ttgaggcccg
    29941 gcgtatattg caccgggctt ttttttgcca tttatcttat agactaaatt tcactgctta
    30001 atattaactt aataaatatc agctattctt ataaagaaaa tctgaattgt ttttcgttgc
    30061 gttgaccatc gaacgacgta gcgttaaaac ttttagctct tatcaggatg ctaaaaacat
    30121 catgattcac agttaagtta attctgagag catgaaataa aaattaccat ttccggtact
    30181 ggctatgtag gcttgtcaaa cgggcttcta atcgcacaaa accatgaggt tgtggcatta
    30241 gatattttac cgtcacgcgt tgctatgctg aatgatcgga tatctcctat tgttgataag
    30301 gaaattcagc agtttttgca atcagataaa atacacttta atgccacatt agataaaaat
    30361 gaagcctacc gggatgctga ttatgtcatc atcgccactc caaccgacta tgatcctaaa
    30421 actaattatt tcaatacatc cagtgtagaa tcagcaatta aagacgtagt tgagataaat
    30481 ccttatgcgg ttatggtgat caaatcaacg gttcccgttg gttttaccgc agcgatgcat
    30541 aagaaatatc gcactgaaaa tattatattc tccccagaat ttctccgtga gggtaaagcc
    30601 ctttacgata atctccatcc gtcacgtatt gtaatcggtg agcgttcgga acgcgcagaa
    30661 cgttttgctg cgttattaca ggaaggcgcg attaagcaaa atatcccgac cctgttcacc
    30721 gattcaaccg aagcagaagc gattaaactg tttgctaata cctatctggc gatgcgcgtg
    30781 gcgtacttta atgaactgga tagctacgca gaaagtttag gtctgaattc ccgtcaaata
    30841 atcgaaggcg tttgtctcga cccacgtatt ggcaaccatt acaacaatcc gtcgtttggc
    30901 tatggtggtt attgtctgcc gaaagatacc aagcagttac tggcgaacta ccagtctgtg
    30961 ccgaataacc tgatttcggc aattgtcgat gcaaaccgca cgcgtaaaga ttttattgcc
    31021 gatgccattt tgttacgcaa gccgcaagtg gtgggtattt atcgtctgat tatgaagagc
    31081 ggctcagata acttccgcgc gtcttccatt caggggatta tgaagcgtat caaggcgaaa
    31141 ggcgttgaag tgatcatata cgagccagtg atgaaagaag actcattctt caactctcgc
    31201 ctggaacgag atctcgccac cttcaaacaa caagccgatg tcattatttc caaccgtatg
    31261 gcagaagagc ttagggatgt ggcagataag gtatacaccc gcgatctctt tggcagcgac
    31321 taacatcctg ttatcagggc gattttcgcc ctgattctct tatgttccct ttgtaataat
    31381 tcattatttt tatcatttat cctatagcat tcatggcgat tatcgctaaa ctatggcgac
    31441 ttaaaattat ttcgtccgtt agggtaatga tgagagtaga aaataataat gtttctgggc
    31501 aaaaccatga cccggaacag attgatttga ttgatttact ggtgcagttg tggcgcggca
    31561 agatgacaat tatcatctct gtcattgttg ctattgccct ggctataggg tatctggccg
    31621 ttgccaaaga aaagtggact tccacagcta tcgttactca acctgatgtg gggcaaatcg
    31681 ctggttatac caacgcgatg aatgtgattt acggtccggc tgtaccgaaa gtctccgaca
    31741 ttcaggcttc acttatcgga cgttacagca ctgcattctc agcattagcg gaaacgctgg
    31801 ataaccagga aaaatcagaa aagctgacca ttgagcctac tgttaagaac cagccgttac
    31861 cactggcggt gtcttatgtt ggtgaaacac ctgaaggtgc gcagaaacag ctggcgaagt
    31921 atatccagca agttgacgac caggtaaatg aagaactgga acaagacctg aaagacaaca
    31981 tcgcgctgcg tatgaaaaac ttgcaggatt ctctgaaaac tcaggaagta gtcgcgcagg
    32041 agcagaaaga tctgcgtatc cgtcagattc aggaagcgtt gcagtatgcg aatcaggcgc
    32101 aggtgacaaa gccacaggtt cagcagactg aagatgtgac gcaagatacg ttgttccttt
    32161 tggggagcga agcgctggag tcgatgatta agcatgaggc gacccgtccg ttggtgttct
    32221 cgccaaacta ctatcagact cgtcaaaacc tgctggatat cgaaaactta aaggttgatg
    32281 atcttgatat tcatgcttac cgttatgtga tgaaaccgac gttacctatt cgtcgcgata
    32341 gcccgaaaaa ggcaattacc ttgattctgg cggtgctgct gggcggcatg gttggcgcgg
    32401 ggattgtgct ggggcgtaac gctctgcgta attacaacgc gaagtaatct tttcggtttt
    32461 aaagaaaaag ggcagggtgg tgacaccttg cccgtttttt ttgccggatg cgacaacaat
    32521 atcgcatccg cttaccccgc aactcactga tgccgtttac gcaggttctc aattaccgtc
    32581 gttaaatcca gatcctgatc ctgcaacagc accagcaggt gatacatcaa atccgatgcc
    32641 tcgttggtca gctcaaagcg gtcatgtacc gttgcggcaa gtgcggtttc cacgccttct
    32701 tcgcccactt tctgcgcaat gcgtttagtg ccgctggcat acagtttggc tgtgtaagag
    32761 gtttccgggt cggcagattt gcgttcggcg agcagttgtt ccagttgata taggaacagc
    32821 cactggtgag cagtgtcgcc gaaacagctg ctggtgcctt tgtggcaggt cgggccgatg
    32881 ggattcgcca gtaccagtaa cgtgtcgttg tcgcagtccg gggcaatact caccacattg
    32941 aggaaattgc ccgacgtttc gcctttggtc cacagtcgct gtttagtgcg ggagaaaaag
    33001 gtgactttgc cgctttcgat ggttttgtcc agagcttccg ggttcatgta gcccagcatt
    33061 aacacttcac cggataccgc gtgttgcaca atcaccggca tcagtccgtc ggttttttcc
    33121 cagtccagtt tgcgacgctg ttgttctgtt aacatatcct gatctccacg ccctgtgttg
    33181 ccaggtacgc ttttaattca ccaatattga ttatttgttt gtggaatacg gaagctgcca
    33241 gcgcaccgtc aacgtcggca tcgcggaagg cttcgaggaa gtgttccatg gtccccgcgc
    33301 caccggaggc aattagcgga acgtggcaaa cttcacgcac ttttttcagt tgttcgaggt
    33361 cgtaaccgtt acgcacgccg tcctgattca tcatgttgag gacgatttct ccggcaccgc
    33421 gtttttgcac ttcctgtacc cagtcgagcg tttcccactg agtgacgcgg gtgcggcttt
    33481 catcgccggt atattgattc acatgatatt taccggtttc agcgtcgtac caggtatcaa
    33541 taccgaccac aatacactgc acgccaaagc gatccgccag gcgagtaatt aacgtcgggt
    33601 ccgccagcgc aggcgagttt atggaaactt tatccgcgcc aaaggaaaga attttcgcgg
    33661 catcttccag agacttaatc ccacccgcca cacagaacgg aatgtcgatc acttccgcca
    33721 cgcgagatac ccagctttta tctaccacac ggccatcgct ggaagcggtg atatcgtaga
    33781 acaccagttc gtctgcacct tcttcagcgt agcgttttgc tagcggtaca atatcgccaa
    33841 tgatttcatg gttgcgaaac tgtacgcctt tcaccacctg accatcacga acgtcgagac
    33901 acggaattat gcgttttgcc agcatgcgat ggcctccttc acggtgaatt taccttccag
    33961 taatgcacga ccaactatta cgccgcgcac gccagtgcca cgtagggcag caacatcatc
    34021 aatgtcacca atgccgccgg atgactgaaa tgccacctgc gggtatctgg cgcacacttc
    34081 ttcatataaa gagacgttag aacctgccag cgtgccgtcg cgcgagatat cggtacacag
    34141 cacatgtttc aggccgacgg gcagataggt ttccaccagt tgttccagtg aaacgcccga
    34201 gttctcttgc cagccgctga ctgccacctg cttgttgcct tgctcgtcaa tacggacatc
    34261 cagcgccagc actaaggcat cggcaccaaa acgttcaaac cagcctttca ccatatctgg
    34321 tgatttcacc gcggtggagc cgaccactac gcgcgcaacg cccgcttcca gtaacgccgc
    34381 cacatcttct tcgctacgca cgccgccgcc aacctgcacc ggcacgttaa cgcccgcgac
    34441 cagggtttta atcagcggga tttgacgttt tgccggatct tttgccccgg tcagatccac
    34501 cagatgcaac acttcggcac cttgcgcagc gtaatcctgt aagcgtggca gcgggtcgtt
    34561 accgtaatcg cgttgtttgc cgtaatcgcc ctgatggaga cgcaccacag tgccgtcaat
    34621 taaatctaat gccggaataa tcatcacatc tccaggaagt ttttcagcaa cttagcgcca
    34681 gcggcaccag aacgctccgg gtggaactgc acgccgtaga agttatcttt ttgtaccgcc
    34741 gcggtgaacg gttcgccgta attacactgg gcgatggtcc acggattgac tggcattgcg
    34801 tagctgtgaa caaagtaaaa gtacgcgccg tcttcaatcc cctgaaacag gcggttgcct
    34861 gcctgcgggt aaacgcggtt ccagcccata tgtggcagtg gcagaccaaa gtcggtcatt
    34921 ttcgggacgt cttcgtcgat gatgcccagc aagtcgacgc cgttgctctc ttcgctgcgc
    34981 cgcccaagca gttgcatccc taagcagatg cccagcaccg gttgggtaca ggctttgatg
    35041 agatcaaaca gttcgcgctc acgcacctga tccatcgctg cttgtgcggt gcctacgccg
    35101 ggtaaaaata gtttatcggc cagcaacacg acgtccgggt cacggctgac tttgggttca
    35161 taaccgtggc gcgcaatggc agacttcacc gagttcagat tggcgcagcc agtatcaagg
    35221 atcaccacgt tcattacagc actcctttcg acgagggcag ggtgtcgcct tccacgcgga
    35281 tggcctggcg cagggtgcga ccaaaggctt tgaacaggct ctctacacgg tggtgatcgt
    35341 ttttaccttt ggttttcagg tgtagcgtca cgcccatggt gtaagagagc gaacggaaga
    35401 agtgctcgat catctcggtg ctgagatcgc ccacgcgctg gtaggtaaat tcagctttat
    35461 attccaggtg cgggcgacca gatatatcca gcgcgcagcg ggcaaggcat tcgtccatcg
    35521 gcagcacaaa accaaagcgg caaataccgc gtttgtcgcc gagggcgatt tttaacgctt
    35581 cgcccaacgc caagccggta tcttcgacgg tgtggtgatc gtcgatatag aggtcgcctt
    35641 tgacgttgat ttccatacgg aaaccgccgt gggtagcgat ctgatccagc atgtgatcaa
    35701 agaagccaac gccggtgtta atcttgctgc caccttcgcg atccagccac acctggacat
    35761 caatttgcgt ctctttggtg ttgcgcacca catgggcgta acggtctcgt ttagtgagtt
    35821 gctcgccaat catcggccag ttcagggctt cgcggtcgta gcgtaaacca ttaatgccca
    35881 tgttttccgc cagttgaatg tcggtcgcgc gatcgccaat cacataacta ttggcacgat
    35941 ccatcgcttg ctcagccaga taacgctcca ccagttttac tttcggctta cggcagtcgc
    36001 actcatcggc gggcaggtgt gggcaaatca gcacttcatc aaactgcacg ccttgcgagg
    36061 tgaagatctg catcatcagg ttgtgcgggc catcgaaatc cgcctgcggg aaactttgtg
    36121 ttcccagacc atcctgattg gtgatcatca ccagcttata tcccgctttt tgcagcttca
    36181 gcagctccgg gatcacgccc ggttcaaagg cgagtttgtc aaaacggtcc acctgaaaat
    36241 cattcggcgg ttcgctaatc agggttccat cgcgatcgat aaaaagatac ttctgactca
    36301 taaaacttgc tccgcacgta aggcgtcaat gacgcgctgg ctttcttcac gggttccgac
    36361 ggtaattcgc aggcagccgc ttaaagaggg ttgtttattc tgatcacgta agataatgcc
    36421 ctgatcccac aaagatttaa acactgcgct ggaggcttta aagcgcgcca gaatgtagtt
    36481 ggtttcagag tcgaaaacct gctctacgca cgggatctct ttcagtgcgg taatcagata
    36541 ttcgcgttct gcaataattt gcgccacccg ctcacgcatg gcgataattc cctgcgggct
    36601 taacgcctgg gccgcaatgt cggcaaccgg cgtcgagagc gggtaggggg cgatcacttt
    36661 catcagcagg ttgatgactt cttcgtttgc cagcgtaaac ccgcaacgaa ggcccgccag
    36721 agcaaaagct ttcgacagtg tgcgcaaaat agccaggtgc ggatattccg ccagccagcc
    36781 agccagcgat gcctgcgggc aaaactcgat ataggcttca tcggcaacca caatcgcttt
    36841 accgcgggtt aactccagca gagtgcgaaa atcctgcggg ttgatcagtt gcccggtcgg
    36901 gttgttgggg ctgcaaacat agaccacttt tacgccgtcc agcttgtcgg aaatgccctg
    36961 taagtccagt tgccagttgt ccagcgtcgg cactgtgcgg cactcgacgc caatggtttc
    37021 ggcgctgacg ctgtacatgc cgtacgttgg cgggcagtag aggatggcgt ctttacccgg
    37081 ttcgcaaaaa gcgcgaatca gcagttcaat accttcgtcc gcgccacgac tgaccagcac
    37141 ctgttccggt tttacgcctg catattgcgc gtaattttca atcaccgctt tcggctgaca
    37201 ttccgggtag cggttgagcg tttgctgagt aagctgaaac tccacggctg tgggatattc
    37261 gttggcgttc agccagacgt cgccgttacc gcccagacga cgcgccgact gatacggcgt
    37321 caggttgcgg acgttttcac gcgctaaatc ggtaatagtc acggtgctca tgcttgctcc
    37381 ttaagggcgt taacacgcaa agtaacggca tttttatggg cggtcaggcg ctcggcggcg
    37441 gccaatgttt caatggtcga agccagcgcg gagaaacctt ctttcgacag ttcctgcacg
    37501 gtcatgcgct tctggaaatc tgccagcccg aggctggaac aggtggcggt gtaaccgtaa
    37561 gtcggcagaa cgtggttggt gccggaggcg taatcacctg ccgattccgg tgaccagtca
    37621 ccaagaaata ccgaaccggc gctggtgatg ccatcgacca gatcgcgggc gttgcgggtc
    37681 tggatgatca ggtgctccgg accgtactgg ttagagatct ctacgcactg cgttaaatcg
    37741 ttggtcacaa tcaggcggct ggcgctcagt gcctgacggg cggtttcagc tctcggcagt
    37801 tccgccagct ggcgttcgac agcttcggca acacgacgtg ccatatcacc gtcgggcgtc
    37861 agtaaaatca cctgagagtc cgggccgtgt tcagcctggg agagcaaatc agaagccacg
    37921 aaatccggcg ttgcgccgct gtcagcaatc accagcactt ccgacgggcc tgcgggcata
    37981 tcgatcgccg caccgtcaag acgctggctt acctggcgtt ttgcctcggt gacaaaggcg
    38041 tttcctggtc cgaagatttt gtccactttc ggcacggatt ctgtaccaaa cgccagcgcg
    38101 gcaatggcct gtgcgccgcc gacgttaaac acgtcctgta caccgcacag ctgcgccgca
    38161 taaaggatct catcagcaat cggcggcggt gagcacagca ccactttttt acagcccgca
    38221 atacgcgccg gagttgccag cattaatacc gttgagaaga gcggggcgga gccgccagga
    38281 atatacaacc caactgaagc taccgggcgc gtgacctgct ggcaacgtac gcctggctgc
    38341 gtttctacat caaccggcgg cagtttttgc gcagtgtgga aggtttcaat attctttact
    38401 gccaccgcca tcgcctgttt tagctcgtcg ctcaggcgtt cgctagcggc ggcaatttcc
    38461 tcagcagaca ccttcagcgc ggtaaccgtg gttttatcaa acttcgcgct gtattcccgc
    38521 agggcgtcat caccgcgtgc tttcacgtta tcgagaatat cgttaacagt gcgggtaatg
    38581 ctttcagaag cggagatcgc cgggcgcatt aacagctggc gttgttgctc cgcagtacag
    38641 ctattccagt taatgattgt gttaaagctc atggcgatca ctccatcatc ttctcaatcg
    38701 gcaggaccag gattgaactg gctcccagcg ctttcagttt ttccattgtt tcccagaaca
    38761 gggtttcgct gctgaccatg tgcatcgcta cgcgttgttg atcacccgcc agcggcagaa
    38821 tggttgggcg ttcggcacct ggcagcaggg cgatgacttc atccagacgt tcggtcggtg
    38881 cgtgcatcat gatgtatttt gattcgcgcg cttggatcac accctgaata cgggtcagca
    38941 gtttgtcgat cagttgctgt ttggattctt ccatttcgcc atcgcgctgg atcaggcagg
    39001 ctttcgagcg gtagataact tcgacttcgc gcaggccgtt agcttccagc gtggcaccgg
    39061 tagaaaccag atcgcaaatc gcatccgcca gtccggcgcg cggggcgact tcaacagaac
    39121 cgttcagtaa gcaggattta aaagagatgc ctttctggtc gagataacgc ttgagcaggt
    39181 gaggataaga ggtggcgata cgtttaccat ttaaggagag cgggccgtcc caggcttcat
    39241 caaccggcgt tgccagcgaa aggcggcagc cgccgaaatc cagacgacgc aaggtaaagt
    39301 agcgcggatc ttcaccctgg gcgcggcggt taagcagctc ttcttccagc acgttttcgc
    39361 cgataatccc aaggtctacc acgccatcca ttaccagacc gggaatgtcg tcgtcacgca
    39421 cacgcagaat atcaatcggc atgttttctg ccatcgcgat caggcgctgg gtgtgaagat
    39481 taattttaat gccacagcgc gccagcaatt cgcgtgagtc atcacttaaa cggccggatt
    39541 tctgcatagc tatgcgtaaa cgagtgttgt ctgtcatttt gttattcctc ttttaacctg
    39601 tctgaatcgt aatcaaccgc gcaataaaaa agcccccgga aggtgatctt ccgggggctt
    39661 tctcatgcgt tcatgcacca ctggaagatc tgaatgtctt ccagcacaca tcgcctgaaa
    39721 gactagtcag gatgatggtg atgtttaaat tgaacgcgtg tcataaaagt ctctgtgaat
    39781 gtttattcaa ctgatgtctt ttaacctaaa ccactttcac gttagaaagc aagggctttt
    39841 tatatatttt atggcaatgg atttgtttaa tgaatgagcg gggaaaggag aggcctggag
    39901 tgactacgtt agaaaagtaa tcgtgaaaat atgtctttaa aaccctcaag aacattgtgt
    39961 tctgtaacta aagtgggctt tgttcctgcc ggatgcggcg tgaatgcctt atcaggtcta
    40021 caaatgttgc ctaaattcaa tatattgatg tttttgtagg actgataagc ggagcgcatc
    40081 aggcaatggt atatttgcta acagtttcga tttcattcat agaatgaatt gtcagttttg
    40141 atacgctagc gtagcctgct agcgtagcct tatagatcta aggtgtatca ggagataacg
    40201 gatgaaaaag gtcgcaattg tcgggttagg gtggttaggc atgccgctgg cgatgtcact
    40261 ttcagcgcga ggctggcaag tcaccgggag taaaaccaca caagatggtg tcgaagcggc
    40321 ccgaatgagt ggcattgata gctatctgct tcgcatggag cctgagttag tttgcgattc
    40381 tgacgatctg gatgccctga tggatgccga cgcgctggtc attacgcttc cggcacgtcg
    40441 tagcggcccc ggcgatgagt tctatttaca agcggtacaa gagttagtgg atagcgcgct
    40501 ggcccatcgt attccccgaa ttatttttac cagctcaacg tctgtctatg gcgacgcgca
    40561 aggcacggtg aaagaaacca ccccgcgtaa tccggtaacc aacagtggac gagtattaga
    40621 agaactcgaa gactggctgc acaatttacc cggtacttcg gtcgatattc tgcgtcttgc
    40681 ggggctggtc ggaccgggac gtcatcccgg acgcttcttt gccggaaaaa ccgcgcctga
    40741 tggtgaacat ggtgttaatt tagtccattt agaagatgtt attggcgcta tcactctgtt
    40801 gttacaggca cctaaaggcg gacacatcta taatatatgt gcgccagctc accctgcgcg
    40861 taatgttttc tatccgcaga tggcccgttt actggggctg gaacctccgc agtttagaaa
    40921 tagtctggac agcggcaaag gtaagattat tgatggcagt cggatttgta atgaactggg
    40981 atttgaatac cagtatcccg atccgctggt aatgccgctg gagtaaacga tcacgccagc
    41041 aggacgccgc atacactgca agggggcgtg tatgaaacca ctgctggatg tgttgatgat
    41101 cctcgatgcc ttagaaaaag aaggcagttt tgcggcggcg tcggccaaac tctacaagac
    41161 gccgtccgct ctgagttaca ccgttcacaa gctggaaagc gaccttaata ttcaattgct
    41221 tgatcgtagc ggtcaccgcg ctaaattcac ccgtaccgga aaaatgttat tagagaaagg
    41281 gcgggaagtt ctgcataccg tgcgggaact ggaaaagcag gcgatcaaac tgcatgaagg
    41341 ctgggaaaac gagctggtga ttggcgtgga cgacacgttt cctttttctc tgcttgcgcc
    41401 actgattgaa gctttttatc aacatcatag cgtgacgcgc ctgaagttta tcaatggcgt
    41461 actcggtggt tcctgggatg ccctgactca ggggcgagcg gatattattg ttggcgcgat
    41521 gcatgagcca ccatcttcca gtgagtttgg tttttcacgg ttgggcgatc tggaacaagt
    41581 ctttgcggtc gcgcctcatc atccgttagc cctggaagaa gagccgttaa atcgtcgtat
    41641 tattaagcga tatcgggcga ttgtggtggg ggatactgcg caggcaggcg cttctacggc
    41701 ctcacaactt ctcgacgaac aagaagccat taccgttttc gattttaaaa ccaagctgga
    41761 gctgcaaatt agcggcctcg gctgcggcta tttaccccgt tatctggcgc aacgttttct
    41821 cgatagtggc gcgttaatcg agaagaaagt ggtcgcccaa actctctttg aacccgtctg
    41881 gattggctgg aacgaacaga ccgcagggct tgccagcggc tggtggcgag atgaaatttt
    41941 agcaaatagt gcgatcgccg gtgtttatgc aaaatctgat gacggaaaat cagccattta
    42001 aagaaaaatt attatgacaa gcctctcatt ctcttgtcat ttccccccca tttaggcaca
    42061 atgcgccgct gtcaaaaaat gactaaaaac cgacgtttca tcagcgtcgg ttattttttg
    42121 cttcaaacca atcattcata ccaagaggcc gggcttcgta ccggatagat atttactaaa
    42181 aatcgacagt tgttgtcgct gaggaatcca aaaaaatggg gcaatttttt gcttacgcga
    42241 cggttatcac cgtaaaggag aatgaccatg tcgcataacg ttactccaaa cacctctcgc
    42301 gtggaattgc gtaaaacgct tacgttagtt ccggttgtaa tgatgggtct tgcctatatg
    42361 cagccgatga cgctgtttga tacttttggt atcgtttcag gcctcacgga tggtcatgtg
    42421 ccgacagcct atgcgttcgc attgattgcg atcctgttta cggctctgag ctacgggaag
    42481 ctggttcgcc gctatccttc tgctggctct gcatacactt acgcccagaa atccattagc
    42541 ccgactgtcg gctttatggt gggttggtct tctctgctcg actatctgtt cgcgccgatg
    42601 atcaacattc tgctggcgaa aatctatttt gaagctctgg tgccttccat cccatcgtgg
    42661 atgtttgtgg tggcgctggt ggcctttatg accgccttta acctgcgtag tctgaaatcc
    42721 gtagcgaact tcaacactgt aatcgtcgtg ttgcaggtag tgctgatcgc ggtgattctg
    42781 ggcatggttg tttatggcgt atttgaaggt gaaggcgctg gtacgctggc gagcactcgt
    42841 ccgttctggt ctggcgatgc gcatgttatc ccgatgatta ccggggcgac aatcctgtgc
    42901 ttctccttta ccggctttga cggcatcagc aatctgtcgg aagaaaccaa agatgcagag
    42961 cgcgtgatcc cgcgtgcgat tttcctgacc gcgctgattg gcggcatgat cttcatcttt
    43021 gcaacttact tcctgcagct gtacttcccg gatatctctc gctttaaaga tccggatgcg
    43081 tcacagcctg aaatcatgct gtatgttgcg ggtaaagcgt tccaggttgg cgcgctgatc
    43141 ttctccacca ttaccgtact ggcgtccggt atggcggcgc acgcaggcgt agcgcgtctg
    43201 atgtacgtaa tgggtcgtga cggcgtattc ccgaaaagct tcttcggtta tgtacacccg
    43261 aaatggcgta ctccggcaat gaacatcatc ctggttggcg cgattgcctt gctggcaatc
    43321 aacttcgacc tggtaatggc tacggcgctg attaactttg gtgcgttggt ggcgttcacc
    43381 ttcgttaacc tgtcggtcat ctcgcagttc tggatccgtg agaagcgtaa caggacgctg
    43441 aaagatcact tccagtatct gttcctgccg atgtgtggtg cgctgaccgt tggtgcgctg
    43501 tgggttaacc tggaagaaag ctcaatggtt ctgggtctga tctgggcggc tatcggcctg
    43561 atttacctgg cttgcgtcac caagagcttc cgtaacccgg ttccgcagta cgaagacgtt
    43621 gcataatcat cttttctaat aataaaccgg agtcgaatga atatttggct ccggtttttt
    43681 tattcttttt tatcgaaatc ctcattaata accatttgtt ctaatttaga gaatttggtt
    43741 attggtctgc attccaccag tcatgaataa tttccctatt aacattcatc tggttaatta
    43801 atttatgttt tcaatgatat taagcgggct aatttgtggt gctctgctgg gatttgtcat
    43861 gtagcgtggg cgtttttgcc tgacaggtgg ttttcgcgat atgtatatcg cgaaaaataa
    43921 tcgcatgttt tacgccttgc tgattgcaat ttcggtacaa agcgtggggg tttttgcgtt
    43981 aattcaggcg ggcctactga cttacgaagc cggggcgttc ccgtggcttg gtactgttat
    44041 aggtgggtat atcttcgggc tgggaattgt tctggcgggt ggatgtgcca ccgggacctg
    44101 gtatcgcgcg ggtgagggat tgagcggcag ttggatcgcg cttttcactt atatggtgat
    44161 gagtgcggtg atgcgttctc cacatgccag tggtttaaat caaaccttgc agcactacag
    44221 tactgaacat aactctattg ctgagacttt taatttgtct gtgtggccgt tggttgccgt
    44281 tttgctggtg ataacgctct gggtggtgat gaaagagtta aagaagccaa aactcaaagt
    44341 cgcgacctta ccgccgcgca gaaccgggat cgctcatatt ctgtttgaaa aacgctggca
    44401 tccctttgtc actgctgtac tcatcggttt gattgcgctt ttagcctggc ccctgagtga
    44461 agctaccgga cgtatgtttg ggttaggcat cacttcccca acggccaata ttctgcaatt
    44521 tctggtcgcg ggtgacgtga aatacattaa ttggggcgtt ttcctggtgt tagggatctt
    44581 cgtggggtca tttattgcag ccaaagcgag ccgtgagttt cgcgttcgcg cagctgatgc
    44641 acaaacaaca ttacgtagcg ggttaggtgg tgtactgatg ggcttcggtg ccagtattgc
    44701 aggtggttgc tctatcggta atggactggt tatgactgca atgatgacct ggcagggctg
    44761 gattggcctt gtatttatga ttctcggagt ctggactgcg tcctggctta tgtatgttcg
    44821 accgcagcgt aaggcgcgac tggcaactgc tgcggcaaat taagtaaggt gtaaagatgg
    44881 cgattaaaaa gctggatgtg gtgacgcagg tctgtccgtt tccactcata gaagcaaaag
    44941 cagcactggc agaaatggcc agcggcgacg agttggtaat tgagtttgat tgcacccagg
    45001 caactgaagc aatcccacag tgggcggcag aagaagggca tgccatcacc gattatcagc
    45061 agattggcga tgcagcgtgg agcatcaccg ttcaaaaagc ctgactcaat attgacctcc
    45121 gccgtaccag cggcggaggc ttcaaattag acaatctctt ccgcgtactg ccaaagcgct
    45181 tttaacagcg ccactttctc tttgtcatcg gcatattgtt gtgccagcat ctgcaattca
    45241 tcagcatagc cctgcaaaaa ctctggcgtg aagacctggc ggcggtactc cagccagcgt
    45301 tgctgctcgg cataatccag cgtccccggg aagttgcgtg cccgataatt gaacaacagt
    45361 ttttcaattc gtttatcaac aaaggtgata tccagagccg gtaaattacg cggttcagtc
    45421 tccagcacga ttttcattgc tgcacgatcg gcgtcgctaa aaaagccatt ataaagctgt
    45481 gcatctacat tatctgatgg tgtaaacggt tcagcttctg caaaaattgc cacaactttg
    45541 tcgcgtactt gcgggttttc gcgcaacact ttcaggttat ccaggcagtg ttgacgatca
    45601 atccctaaac gctcagcgtc ttccgggcgt agcgtattcg cctgggccag caccggacat
    45661 ttattgatat gcaccagctt aaccggaacg gcggcgttat cgccaagatc ggtttttgcg
    45721 gtatataaac gctcgcgcaa tgtgtcgcta tccagttcca gtaatggcga aatgtctcct
    45781 gccaaatcca ccataattac ggcattgcga ttttcaggat gccacgccag cggtgccacc
    45841 cagctggtat tgccgcgcca tgccccaaac attccggaaa cgtgaaccag gggtttcatc
    45901 tgcggaacat caatcaacgc catcagtttg tgtttattac gatgggtaaa gagataatca
    45961 aacaggcgtg gctgacgcgt ttttaccagt ttcgccatcg caatagtggc gtacacatca
    46021 gccatcgcat cgtgggcgtt gctatgttca ataccattcg ctttggttaa atgctcaagg
    46081 cgaaagctcg gtagaccgtc atcattttca ggccagttta ttccttccgg gcgcagggca
    46141 taacaggcac gcataacatc cagtaaatcc cagcgcgagt tatcatgctg ccagctccag
    46201 gcgtaaggat cgtagaaatt acgataaaaa acgttgcgtg tgacttcgtc gtcgaaacgc
    46261 acattgttgt agcccagaat acaggtcttc ggtacggtaa aaagcgagtg aatccgggcg
    46321 gcaaacgcgg cttcgttttc tcctttcgcc cgtgcttcct gcggagtaat accggtaatt
    46381 aatactgctc caggctgggg taaatagtca tccgcgggct tgcagtaaaa gacttcgggt
    46441 tcgccgatga cattgaattc gctatcggtg cgaatggctg cgaactgtgc agggcgatct
    46501 aacgcggggt gcgtgccaaa ggtttcgtaa tcgtgaaaca aaaaggtaga ttgttgctta
    46561 ccgtcattca tcattaggtt aaatccgttg tttctgctgt ctgccagagt atcaaatatc
    46621 accgtgctaa tcagctttag cgcaatttga cagcgagtgg caacagatca tgtcagataa
    46681 aaatgcgagg gtagtcacat tttcttgcac tttattccag ccagttcata agtatttccg
    46741 taaaaagaac agctatttga aactcctgag ggtttgctgt tgaaacgccg tcttattatt
    46801 gctgcttctt tgttcgtttt taacttatcg tctggttttg cggcggaaaa cattcctttc
    46861 tcacctcagc ctccagagat tcatgccggg tcctgggtac tgatggatta caccaccggt
    46921 cagatcctca ccgcgggtaa tgagcatcaa cagcgcaatc ccgccagcct gacaaagctg
    46981 atgacgggtt atgtcgtgga tcgcgctatc gatagtcatc gcattacgcc agacgatatt
    47041 gtcaccgtgg ggcgcgatgc gtgggcgaaa gataatccgg tgtttgtcgg ttcttcactg
    47101 atgtttttga aagagggcga tcgcgtatcg gtacgtgatt taagccgtgg gttaattgtg
    47161 gattctggaa atgacgcttg tgttgcactg gctgactata ttgccggtgg gcaacggcag
    47221 tttgtagaaa tgatgaacaa ctatgccgag aagctgcatc tcaaggatac gcattttgaa
    47281 acagtgcatg gcctggatgc gccaggtcag catagctcgg cttatgattt agctgtgctt
    47341 tctcgtgcta tcatccacgg cgagcccgag ttttatcata tgtacagtga gaaaagcctc
    47401 acctggaacg gtatcaccca gcaaaaccgt aacgggttat tgtgggataa aaccatgaat
    47461 gttgacggcc tgaaaacggg tcatacttct ggtgccgggt ttaatctcat tgcttcgggt
    47521 gtagatgggc agcgtcgtct cattgcagtg gtaatgggtg ctgacagtgc aaaaggtcgt
    47581 gaggaagagg caagaaaatt actgcgttgg gggcaacaaa actttactac ggtgcaaatt
    47641 ttgcaccgtg ggaaaaaggt cggaacgcat ctggtatggc gataaagaaa atatcgacct
    47701 gggaacggaa caagagttct ggatggtgct accgaaagcc gaaattccac atatcaaagc
    47761 caaatatacc gttgatggta aagaactcac cgcgccaatt agcgcccatc agcgggtagg
    47821 ggaaattgaa ctttacgacc gtgataaaca ggtggcgcac tggccgctgg ttaccctgga
    47881 atctgtcggg gaaggcagca tgttttctcg cctgagtgat tatttccacc ataaggcctg
    47941 acctttcttt tgcagcagac tggcaggagt gcgagtctgc tcgcataatc aacactcatt
    48001 ccttgtggtt ttaatattgc aaccatactg tatataaaaa cagtattaat ggaggcgtca
    48061 tgaactacga gattaagcag gaagataaac gtaccgttgc aggtttccat ctcgttggcc
    48121 cctgggaaca gacggtaaag aaaggttttg agcagttgat gatgtgggta gatagtaaaa
    48181 atattgtgcc gaaggagtgg gttgctgtct attacgacaa tccagatgaa acacccgccg
    48241 aaaaattacg ctgcgacacc gtcgtgacgg tgccgggtta ctttacgctt cccgaaaaca
    48301 gtgagggcgt cattctgaca gaaatttcag gtggtcagta tgcggtggcg gtagctcgtg
    48361 tagtcggtga tgattttgct aaaccctggt atcagttctt taatagcctc ttgcaggaca
    48421 gtgcttatga aatgttacca aagccctgct tcgaggttta cttgaacaat ggcgcggaag
    48481 atgggtactg ggatatcgaa atgtatgttg cggtgcagcc aaaacatcac taattcatct
    48541 cagggcggtg tgttgacgcg aagaccactc tttttttgaa agcgaaaaga gtaagatgcg
    48601 cctttcaaat ttttcgctcc tgccgggaaa ttacactgtt cccggtatgt ccgtcggata
    48661 actcagaggc gcgccttctg gccgacagat gtgttatgag cgcttttaat cttcattacg
    48721 gagtttctgc gtgcgtgccg ataagtcatt aagcccgttt gaaatccggg tataccgcca
    48781 ttaccgcatt gtgcatggta ctcgggtcgc gctggcattc ctgctcactt ttctcattat
    48841 ccgcctgttt actatcccgg aaagcacctg gccgctggtc accatggtgg tgattatggg
    48901 gccaatctcg ttctggggta acgttgtccc tcgcgccttc gaacgtattg gcggtacggt
    48961 gttgggttcg attttaggtc ttatcgctct gcaactggag ttaatttcgt taccgctgat
    49021 gttagtctgg tgcgcggcgg ctatgtttct ttgcggttgg ctggcgctgg gcaagaaacc
    49081 gtatcaagga ttattgattg gggtgacgct ggcaattgtt gtgggttccc cgacaggtga
    49141 aattgatacg gcgttatggc gaagcggcga tgtgatcctc ggctctttac tggcaatgtt
    49201 gtttaccggt atctggccac aacgggcgtt catccactgg cgcattcaac tggcgaaaag
    49261 tctgaccgag tataatcggg tttatcaatc tgcattctca ccgaacttac tcgaacgccc
    49321 acgtctggaa agccatctac aaaaactgct gaccgatgcc gtgaaaatgc gtgggctgat
    49381 tgcgcccgcc agcaaagaaa cccgtattcc aaaatcgata tatgaaggta tccagaccat
    49441 taatcgcaat ctggtttgta tgctggagtt gcaaatcaat gcatactggg ccacgcgccc
    49501 cagccatttc gtgttattga acgcacaaaa acttcgtgat acccagcaca tgatgcagca
    49561 aatactgctg agccttgttc atgcgctgta cgaaggtaat ccgcagccgg tttttgccaa
    49621 tacggaaaaa ttgaacgatg ctgtggaaga gctgcgtcag ttgctcaata accaccatga
    49681 cctgaaggtt gtggaaacac caatctatgg ttatgtgtgg ctgaacatgg aaacggcgca
    49741 tcagcttgag ttgctatcga atctgatttg ccgggccttg cgcaaataat tcctgaacta
    49801 cagaatcatc ttgctgctgc ttcgattcag caaggataaa gggtatgata gtgaaaaggg
    49861 ataaaagcat tgtcatctgc ggcagctatg agtaatgttg gccctaacga atagcggttg
    49921 cttaaacgaa tccgactctc acattatcag gggtataaaa atggaaacta ccaagccttc
    49981 attccaggac gtactggaat ttgttcgtct gttccgtcgt aagaacaaac tgcaacgtga
    50041 aattcaggac gttgagaaaa agatccgtga caaccagaag cgcgtcctgc tgctggacaa
    50101 cctgagtgat tacatcaagc cggggatgag cgttgaagca atccagggca tcatcgccag
    50161 catgaaaggt gactatgaag atcgtgttga cgattacatc atcaaaaatg ccgagctctc
    50221 caaagaacgc cgcgatatct ccaaaaagct gaaagctatg ggcgaaatga aaaacggcga
    50281 agcgaagtaa ttcctgtttt attcaatgag ggttgcccgg caaccctcat tgctcattga
    50341 ttcttttctg tgtatcaaag tcatcattcc catctgataa cctatcgaaa ttagcgacag
    50401 acatcttctg tatgcagcaa ggcaaaaagt tctgtaactc cattgttatt aaccgcactg
    50461 gttactaaca cgttgtgcgc tccggcttcc cgtaaccaac atttcaccaa agatatttgt
    50521 tccatgctgg ctaaatctgc tttggttacg actccaatga ccgggcgatt cattgacgag
    50581 gtaaagcctg gcgaaaaagg tgaccacggt gcgtccgcat taagcaccag cgcgataatg
    50641 tctgcttcgc aggcactgac caacaatgca ctgtagaggc tgcggtttta tcggtgagga
    50701 gtggcagcaa gatttccagc ctcttgatgg tgggcctgtg caatcgttat cagatgcgta
    50761 tagcgattat tcagtgctgc tattgatagc agctgaaagc gagatatccg taccagaatg
    50821 gctc
//
LOCUS       DAJVTL010000012        49461 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.012, whole genome shotgun sequence.
ACCESSION   DAJVTL010000012 DAJVTL010000000
VERSION     DAJVTL010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 49461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49461
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.012"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            76..399
                     /gene="iraM"
                     /locus_tag="OQQ26_000688"
     CDS             76..399
                     /gene="iraM"
                     /locus_tag="OQQ26_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HCS1856259.1"
                     /translation="MKWIVIDTIIQPSCGISFSAIWSDMKMIIWYQSTIFLPPGSIFT
                     LIKSGIILKDKEYPITIYNIAPFNKDLWNLLKSSQECPPGESKITNKCLHNSCIIKIC
                     PYGLK"
     gene            complement(502..1752)
                     /gene="icd"
                     /locus_tag="OQQ26_000689"
     CDS             complement(502..1752)
                     /gene="icd"
                     /locus_tag="OQQ26_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HCS1856260.1"
                     /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
                     IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
                     FERLMEGAKLLKCSEFGDAIIKNM"
     gene            1924..2577
                     /gene="rluE"
                     /locus_tag="OQQ26_000690"
     CDS             1924..2577
                     /gene="rluE"
                     /locus_tag="OQQ26_000690"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HCS1856261.1"
                     /translation="MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILF
                     NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG
                     KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER
                     KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD"
     gene            2587..3048
                     /gene="nudJ"
                     /locus_tag="OQQ26_000691"
     CDS             2587..3048
                     /gene="nudJ"
                     /locus_tag="OQQ26_000691"
                     /EC_number="3.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase NudJ"
                     /protein_id="HCS1856262.1"
                     /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
                     VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
                     CCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI"
     gene            3102..4208
                     /gene="mnmA"
                     /locus_tag="OQQ26_000692"
     CDS             3102..4208
                     /gene="mnmA"
                     /locus_tag="OQQ26_000692"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309632.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HCS1856263.1"
                     /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP
                     GKIITVDGDEIGVHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILIVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD
                     EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
     gene            4244..4885
                     /gene="hflD"
                     /locus_tag="OQQ26_000693"
     CDS             4244..4885
                     /gene="hflD"
                     /locus_tag="OQQ26_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HCS1856264.1"
                     /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
                     DINPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
                     PQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
     gene            4889..6259
                     /gene="purB"
                     /locus_tag="OQQ26_000694"
     CDS             4889..6259
                     /gene="purB"
                     /locus_tag="OQQ26_000694"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HCS1856265.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPVFAADAIGYLDAIVASFSEEDTARIKTIERTTNHDVKAVEYFLKE
                     KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
                     YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
                     MVDELK"
     gene            6427..7098
                     /gene="phoP"
                     /locus_tag="OQQ26_000695"
     CDS             6427..7098
                     /gene="phoP"
                     /locus_tag="OQQ26_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HCS1856266.1"
                     /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
                     LFELR"
     gene            7098..8558
                     /gene="phoQ"
                     /locus_tag="OQQ26_000696"
     CDS             7098..8558
                     /gene="phoQ"
                     /locus_tag="OQQ26_000696"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HCS1856267.1"
                     /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
                     PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
                     VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
                     RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
                     RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
                     YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
                     EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
     gene            8634..9755
                     /gene="roxA"
                     /locus_tag="OQQ26_000697"
                     /gene_synonym="ycfD"
     CDS             8634..9755
                     /gene="roxA"
                     /locus_tag="OQQ26_000697"
                     /gene_synonym="ycfD"
                     /EC_number="1.14.11.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309600.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[50S ribosomal protein L16]-arginine
                     3-hydroxylase"
                     /protein_id="HCS1856268.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA
                     MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
                     LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD
                     ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(9804..11030)
                     /gene="pepT"
                     /locus_tag="OQQ26_000698"
     CDS             complement(9804..11030)
                     /gene="pepT"
                     /locus_tag="OQQ26_000698"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HCS1856269.1"
                     /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
                     MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
                     PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLASMKGTVERADMH
                     YIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
                     IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTAQRK"
     gene            11280..12416
                     /gene="potA"
                     /locus_tag="OQQ26_000699"
     CDS             11280..12416
                     /gene="potA"
                     /locus_tag="OQQ26_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HCS1856270.1"
                     /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRFVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
                     NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
     gene            12400..13257
                     /gene="potB"
                     /locus_tag="OQQ26_000700"
     CDS             12400..13257
                     /gene="potB"
                     /locus_tag="OQQ26_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000799378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HCS1856271.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASR
                     LLNKKVELE"
     gene            13254..14048
                     /gene="potC"
                     /locus_tag="OQQ26_000701"
     CDS             13254..14048
                     /gene="potC"
                     /locus_tag="OQQ26_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HCS1856272.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
                     YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK"
     gene            14045..15091
                     /gene="potD"
                     /locus_tag="OQQ26_000702"
     CDS             14045..15091
                     /gene="potD"
                     /locus_tag="OQQ26_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HCS1856273.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
                     QFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK
                     GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
                     SIYEEYYQKLKAGR"
     gene            complement(15247..16068)
                     /gene="cobB"
                     /locus_tag="OQQ26_000703"
     CDS             complement(15247..16068)
                     /gene="cobB"
                     /locus_tag="OQQ26_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HCS1856274.1"
                     /translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
                     EIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
                     VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL"
     gene            complement(16084..16995)
                     /gene="nagK"
                     /locus_tag="OQQ26_000704"
     CDS             complement(16084..16995)
                     /gene="nagK"
                     /locus_tag="OQQ26_000704"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HCS1856275.1"
                     /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC
                     ELVAEADQRFGCRGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL
                     DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL
                     PVDALTMMGLDFPLRRCGCGQIGCIENYLSGRGFAWLWQHYYHQPLQAPEIIALWEEG
                     DERALAHVDRYLDLLAVCLGNILTIVDPDLVVIGGGLSNFTAITTQLADRLPRHLLPV
                     ARVPRIECARHGDAGGMRGAAFQHLTD"
     gene            complement(17024..18268)
                     /gene="lolE"
                     /locus_tag="OQQ26_000705"
     CDS             complement(17024..18268)
                     /gene="lolE"
                     /locus_tag="OQQ26_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HCS1856276.1"
                     /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTG
                     LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
                     KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG
                     SSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
                     VIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            complement(18268..18969)
                     /gene="lolD"
                     /locus_tag="OQQ26_000706"
     CDS             complement(18268..18969)
                     /gene="lolD"
                     /locus_tag="OQQ26_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309522.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HCS1856277.1"
                     /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEINSRALDMLKAVGLEHRANHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            complement(18962..20161)
                     /gene="lolC"
                     /locus_tag="OQQ26_000707"
     CDS             complement(18962..20161)
                     /gene="lolC"
                     /locus_tag="OQQ26_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HCS1856278.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV
                     LQSARSVAVGVMLGIDPAPKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
                     QIRMMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGN
                     ITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGA
                     LLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            20423..21487
                     /locus_tag="OQQ26_000708"
     CDS             20423..21487
                     /locus_tag="OQQ26_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HCS1856279.1"
                     /translation="MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLS
                     KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW
                     LALSALNQWLAPERDLSNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRL
                     ALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHL
                     LMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIA
                     IYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQR
                     AFSDLLFSPPSLPAAVSYSR"
     gene            21615..25061
                     /gene="mfd"
                     /locus_tag="OQQ26_000709"
     CDS             21615..25061
                     /gene="mfd"
                     /locus_tag="OQQ26_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HCS1856280.1"
                     /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
                     RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
                     EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
                     PRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
                     GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLL
                     GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQQLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
                     RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
                     LTPHPKAMTTDAQKRLEAITSLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIE
                     FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA
                     IA"
     gene            25205..26167
                     /gene="ldtC"
                     /locus_tag="OQQ26_000710"
                     /pseudo
     CDS             25205..26167
                     /gene="ldtC"
                     /locus_tag="OQQ26_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415631.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtC"
     gene            complement(26250..26507)
                     /gene="bhsA"
                     /locus_tag="OQQ26_000711"
     CDS             complement(26250..26507)
                     /gene="bhsA"
                     /locus_tag="OQQ26_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple stress resistance protein BhsA"
                     /protein_id="HCS1856281.1"
                     /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAG
                     TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK"
     gene            26748..27380
                     /gene="comR"
                     /locus_tag="OQQ26_000712"
     CDS             26748..27380
                     /gene="comR"
                     /locus_tag="OQQ26_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HCS1856282.1"
                     /translation="MATDSTQCVKKSRGRPKVFNRDAALDKAMKLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA
                     AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE
                     IPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK"
     gene            complement(27442..27981)
                     /locus_tag="OQQ26_000713"
     CDS             complement(27442..27981)
                     /locus_tag="OQQ26_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HCS1856283.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
                     PGTQIPLDSNGQLILNNKV"
     gene            complement(28208..29512)
                     /gene="ndh"
                     /locus_tag="OQQ26_000714"
     CDS             complement(28208..29512)
                     /gene="ndh"
                     /locus_tag="OQQ26_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017384716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone dehydrogenase"
                     /protein_id="HCS1856284.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE
                     RILPALPPRISAAAHSELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
                     KAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAA
                     HQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
     gene            complement(29913..30455)
                     /locus_tag="OQQ26_000715"
     CDS             complement(29913..30455)
                     /locus_tag="OQQ26_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1856285.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(30478..31503)
                     /gene="nagZ"
                     /locus_tag="OQQ26_000716"
     CDS             complement(30478..31503)
                     /gene="nagZ"
                     /locus_tag="OQQ26_000716"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HCS1856286.1"
                     /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSD
                     VDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERW
                     QEEKAGH"
     gene            complement(31514..32338)
                     /gene="thiK"
                     /locus_tag="OQQ26_000717"
     CDS             complement(31514..32338)
                     /gene="thiK"
                     /locus_tag="OQQ26_000717"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HCS1856287.1"
                     /translation="MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
                     RFVVRQPHDPDAPQSAFLRQYRALSQLPTCIAPKPHLYLRDWMVVDYLPGEVKTYLPD
                     TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP
                     LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYA
                     TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
     gene            complement(32319..32960)
                     /gene="lpoB"
                     /locus_tag="OQQ26_000718"
     CDS             complement(32319..32960)
                     /gene="lpoB"
                     /locus_tag="OQQ26_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HCS1856288.1"
                     /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ
                     PVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSV
                     LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT
                     RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ"
     gene            complement(32974..33351)
                     /locus_tag="OQQ26_000719"
     CDS             complement(32974..33351)
                     /locus_tag="OQQ26_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HCS1856289.1"
                     /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
                     SAEKPVLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH
                     SAVTLYGSANFLGAHKVRLYLYL"
     gene            complement(33354..33713)
                     /gene="hinT"
                     /locus_tag="OQQ26_000720"
     CDS             complement(33354..33713)
                     /gene="hinT"
                     /locus_tag="OQQ26_000720"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HCS1856290.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
                     NILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
     gene            34047..36236
                     /gene="fhuE"
                     /locus_tag="OQQ26_000721"
     CDS             34047..36236
                     /gene="fhuE"
                     /locus_tag="OQQ26_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
                     /protein_id="HCS1856291.1"
                     /translation="MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETV
                     IVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM
                     ENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV
                     VRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSTEYGSWNKERYVADLQSPLTEDG
                     KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG
                     GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVE
                     FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL
                     FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT
                     HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST
                     YASYTSIFQPQNDRDSSGKYLTPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQ
                     STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN
                     PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF
                     TRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGTPRNFSITGTYQF"
     gene            complement(36296..37729)
                     /gene="ptsG"
                     /locus_tag="OQQ26_000722"
     CDS             complement(36296..37729)
                     /gene="ptsG"
                     /locus_tag="OQQ26_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HCS1856292.1"
                     /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFIWPPIGSAIRTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMCDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
                     AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNH"
     gene            complement(38024..38821)
                     /locus_tag="OQQ26_000723"
     CDS             complement(38024..38821)
                     /locus_tag="OQQ26_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1856293.1"
                     /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
                     PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT
                     PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
     gene            complement(38832..39836)
                     /gene="holB"
                     /locus_tag="OQQ26_000724"
     CDS             complement(38832..39836)
                     /gene="holB"
                     /locus_tag="OQQ26_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HCS1856294.1"
                     /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
                     SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKLNE
                     HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
                     LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQ
                     ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
                     LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
                     "
     gene            complement(39833..40474)
                     /locus_tag="OQQ26_000725"
     CDS             complement(39833..40474)
                     /locus_tag="OQQ26_000725"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HCS1856295.1"
                     /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
                     QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
                     LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
                     QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
     gene            complement(40464..41486)
                     /gene="yceG"
                     /locus_tag="OQQ26_000726"
     CDS             complement(40464..41486)
                     /gene="yceG"
                     /locus_tag="OQQ26_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HCS1856296.1"
                     /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
                     KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
                     ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHSLSDDKYATVAQALELENPEWIEGW
                     FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGHADGLPYKDKNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
                     TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
                     KEKNAQ"
     gene            complement(41489..42298)
                     /gene="pabC"
                     /locus_tag="OQQ26_000727"
     CDS             complement(41489..42298)
                     /gene="pabC"
                     /locus_tag="OQQ26_000727"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HCS1856297.1"
                     /translation="MFLINGYKQESLAVSDRATQFGDGCFTTVRVIDGKVSLLSAHIQ
                     RLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
                     ILSVTAYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
                     EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
                     VQASLEEALQADEMVICNALMPVMPVRACGDVTFSSATLYEYLAPLCERPN"
     gene            complement(42418..43659)
                     /gene="fabF"
                     /locus_tag="OQQ26_000728"
     CDS             complement(42418..43659)
                     /gene="fabF"
                     /locus_tag="OQQ26_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HCS1856298.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
                     AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
                     GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSS
                     TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGME
                     YTLCNSFGFGGTNGSLIFKKI"
     gene            complement(43747..43983)
                     /gene="acpP"
                     /locus_tag="OQQ26_000729"
     CDS             complement(43747..43983)
                     /gene="acpP"
                     /locus_tag="OQQ26_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCS1856299.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            complement(44194..44928)
                     /gene="fabG"
                     /locus_tag="OQQ26_000730"
     CDS             complement(44194..44928)
                     /gene="fabG"
                     /locus_tag="OQQ26_000730"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HCS1856300.1"
                     /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
                     ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
                     WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
                     VAFLASDEAAYITGETLHVNGGMYMV"
     gene            complement(44941..45870)
                     /gene="fabD"
                     /locus_tag="OQQ26_000731"
     CDS             complement(44941..45870)
                     /gene="fabD"
                     /locus_tag="OQQ26_000731"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HCS1856301.1"
                     /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
                     GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVFPVN
                     FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
                     ITFNAPTVSVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
                     PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
     gene            complement(45886..46839)
                     /gene="fabH"
                     /locus_tag="OQQ26_000732"
     CDS             complement(45886..46839)
                     /gene="fabH"
                     /locus_tag="OQQ26_000732"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HCS1856302.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
                     AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
                     AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
                     ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
     gene            complement(46907..47977)
                     /gene="plsX"
                     /locus_tag="OQQ26_000733"
     CDS             complement(46907..47977)
                     /gene="plsX"
                     /locus_tag="OQQ26_000733"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415608.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HCS1856303.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDA
                     ITPLLAKADFEQRSRLQIIPAQSVIASDVRPSQAIRASRGSSMRVALELVKEGRAQAC
                     VSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQSEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFELLDGGKSGTLR"
     gene            complement(48058..48231)
                     /gene="rpmF"
                     /locus_tag="OQQ26_000734"
     CDS             complement(48058..48231)
                     /gene="rpmF"
                     /locus_tag="OQQ26_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HCS1856304.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            complement(48283..48804)
                     /gene="yceD"
                     /locus_tag="OQQ26_000735"
     CDS             complement(48283..48804)
                     /gene="yceD"
                     /locus_tag="OQQ26_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HCS1856305.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
                     PEAYEPIKVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQK
                     PNPFAVLASLKRK"
     gene            49003..49461
                     /gene="yceF"
                     /locus_tag="OQQ26_000736"
                     /pseudo
     CDS             49003..49461
                     /gene="yceF"
                     /locus_tag="OQQ26_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
BASE COUNT        12183 a        13119 c        12212 g        11947 t
ORIGIN      
        1 atatactcat atgcaaaatc aagaaataaa catcctaatg aaccatatta aataccgtgg
       61 gattagacat aacaaatgaa gtggatagta attgacacga taattcaacc ttcatgcggc
      121 atatcttttt cagccatatg gagtgatatg aaaatgatca tctggtatca atctactata
      181 tttctccctc ctggtagtat atttacactg attaagtctg gtattatcct taaggataaa
      241 gaatatccta ttactattta taacatcgca ccattcaaca aggatttatg gaatttactc
      301 aaaagcagtc aagagtgtcc tccaggagaa agcaaaataa caaataaatg tttacataat
      361 agttgcatta taaaaatatg cccatatggg ctcaagtaat gggcttcata taaatatgct
      421 cgatgtgcta ttaataatac ccacataaat aaaacaacgg gcgtgttata cgcccgtttc
      481 aatatttaac acatatagag attacatatt cttgatgatc gcgtcaccaa actctgaaca
      541 tttcagcagt ttagcgcctt ccatcagacg ttcgaagtca taggttacgg tcttggcgtt
      601 gattgcacct tccatacctt taacaatcag gtcagccgct tcagtccaac ccatatggcg
      661 cagcatcatc tcagcggaga ggatgataga gcctggattt actttgtcct gaccggcata
      721 tttcggcgca gtaccgtggg tggcttcaaa cagggcgcat tcgtcaccga tgtttgcgcc
      781 aggggcgata ccgataccgc caacctgcgc tgccagggcg tcagaaatgt agtcaccgtt
      841 caggttcata caggcgataa catcatattc agccggacgc agcaggatct gttgcaggaa
      901 tgcatcagca atcacgtctt taatgacgat ctctttgccg gtattcgggt ttttaacttt
      961 cagccacggg ccgccgtcga tcagttcacc gccaaattct tcacgcgcca gctggtagcc
     1021 ccagtcttta aacgcgcctt cggtgaactt catgatgttg cctttgtgca ccagggtcac
     1081 agagtcacga tcgttagcaa ttgcgtattc gatcgctgca cgaaccagac gtttggtgcc
     1141 ttcttcagaa cacggcttaa taccgatacc gcaatgttcc gggaagcgaa ttttcttcac
     1201 gcccatctct tcacgcagga atttaatcac tttctcggcg tcggcagagt cagctttcca
     1261 ttcgataccc gcatatatgt cttccgagtt ttcacggaag ataaccatat cggtcagttc
     1321 agggtgttta accgggcttg gagtgccctg atagtaacgt accggacgca ggcagatgta
     1381 gagatccagt tcctggcgca gggcaacgtt cagagagcga ataccgccac caaccggagt
     1441 ggtcagcgga cctttaatgg caacgcgata ttcacgaatc agatcaagag tttcagcagg
     1501 cagccagacg tcctgaccat aaacctgtgt ggatttttca ccggtgtaaa tttccatcca
     1561 ggagatttta cgctcgcctt tataggcttt ctcgactgca gcgtcgacca ctttcagcat
     1621 ggctggggtt acatctacac cgattccatc accttcaatg taagggataa tcggattttc
     1681 aggaacgttg agtttgccgt tttgcagggt gatcttcttg ccttgtgccg gaacaactac
     1741 tttactttcc attcacctct ccttcgagcg ctactggttt gctcgtctgc caccacgttg
     1801 catatgcgtt tgcgtcctgc gatacggatg ctttagagca attttttgtt aatgatttgt
     1861 aattggcttg tcaatactac cctattgttt gccgtcatga aagatgcgca ttattaggct
     1921 ataatgcggc aattcataat ctctgaaaat accatgcaaa aaacttcttt tagaaatcac
     1981 caggttaagc gattcagctc gcaacgttct accaggcgta aacctgaaaa ccagcccacg
     2041 cgtgtgatcc tcttcaataa accctacgat gttcttccgc agttcaccga tgaagccgga
     2101 cgcaaaacat taaaagaatt catcccggtt cagggcgttt atgcagcagg tcgccttgac
     2161 cgcgatagcg aagggttgct ggtgctgacc aataacggcg cgttgcaggc gcgtttaacc
     2221 cagccgggta aacgcaccgg aaaaatctat tatgtgcagg tggaaggtat tcccacacaa
     2281 gacgcacttg aagccttgcg caatggcgta accttaaatg atggccctac cctgcccgca
     2341 ggcgcggagc tggttgacga acccgcgtgg ttatggccgc ggaatccacc aattcgtgaa
     2401 cgcaaaagta ttcccaccag ctggctgaag atcaccttat atgaaggacg taatcgccag
     2461 gtgcgccgca tgaccgccca tgttggtttc cccacgctgc gactgattcg ctatgcgatg
     2521 ggagattact ctttggataa tcttgccaat ggcgaatggc gagaagtgac agattaagga
     2581 tgccaaatgt ttaaaccgca cgttaccgtt gcttgcgtgg tgcacgcaga aggcaaattt
     2641 ttagtcgttg aagagacgat taatggtaaa gcgttatgga accaacctgc cgggcatctg
     2701 gaagccgatg aaaccttagt ggaagccgcc gcccgtgaac tgtgggaaga aaccggcatc
     2761 agcgcgcagc cgcaacactt tattcgtatg catcagtgga ttgcgccaga taaaacgccg
     2821 tttttgcgtt tcctctttgc cattgagctt gagcaaatat gcccgaccca gcctcatgac
     2881 agcgatatcg actgctgccg ttgggtcagc gccgaagaaa ttttacaggc gtcaaatctt
     2941 cgttcgccgc tggtggcgga aagtattcgt tgttatcaaa gcgggcaacg ttatccgctg
     3001 gagatgattg gcgattttaa ctggcctttt acaaagggtg tcatctaaaa ggctgcgtga
     3061 tagaatacgc cgccttgaag ttcaatgtcg tgagtgatcc aatgtctgaa accgcaaaaa
     3121 aagtaatcgt cggcatgtcc ggcggtgtcg attcctccgt ttctgcctgg ctgttgcaac
     3181 aacagggata tcaggtcgaa ggcctgttta tgaagaactg ggaagaagac gacggtgagg
     3241 aatattgcac agcggcagcg gatctggctg atgcccaggc cgtctgcgac aagctcggca
     3301 ttgaactgca caccgttaac tttgctgccg agtactggga caacgtcttc gaactgttcc
     3361 ttgccgaata taaagccggt cgcacaccga atccggatat tctgtgcaac aaggagatca
     3421 aatttaaagc cttcctcgaa tttgccgccg aagatttagg tgccgattat atcgctaccg
     3481 gtcattacgt acgtcgggcc gatgtcgatg gcaagagccg cctgctgcgt ggtctggaca
     3541 gcaataaaga ccagagctac ttcctttata cgctcagcca tgagcaaatt gcgcaaagcc
     3601 tgttcccggt cggcgaactg gaaaaaccgc aggtgcgtaa gattgctgaa gatcttggtc
     3661 tggtcaccgc gaagaaaaaa gactctaccg gcatttgctt cattggcgaa cgtaaattcc
     3721 gcgagttcct gggccgttat ctcccggcgc aaccgggcaa aatcattacc gtcgatggcg
     3781 atgaaattgg tgtgcaccag gggctgatgt atcacactct cggtcagcgt aaaggtctgg
     3841 gtatcggtgg caccaaagaa ggtaccgaag aaccgtggta tgtggtcgat aaagacgtcg
     3901 aaaacaacat tctgattgtt gcacagggcc atgaacaccc gcgtctgatg tctgtcggtc
     3961 taattgccca gcagctgcac tgggtcgatc gcgaaccatt caccggcact atgcgttgca
     4021 cggtaaaaac ccgctatcgc cagaccgaca ttccgtgcac cgtcaaggcg ctggacgatg
     4081 atcgcattga agtgattttc gatgagccgg ttgccgccgt gacgccgggc cagtctgccg
     4141 tcttctataa cggtgaagtg tgcctcggtg gcggtattat tgagcagcgt ctgccgctgc
     4201 cggtctgatt attatcttta cttaaaacaa ggaagcagtg aacgtggcaa agaattacta
     4261 tgacatcacc ctcgccctgg ccggtatttg tcagtcggca cgcctggtgc aacaactcgc
     4321 tcaccagggg cattgtgatg ccgatgcgct acacgtctca ctcaacagta ttattgatat
     4381 aaaccccagc tcgacgctgg cggtttttgg cggtagcgaa gccaacctgc gcgtcgggct
     4441 ggaaaccttg ctcggcgtgc tcaatgccag cagtcgccag ggcttaaacg ccgaattaac
     4501 ccgctacaca ctcagcctga tggtgcttga gcgcaaactc tcctcagcga aaggtgcgct
     4561 cgacactctg ggcaaccgga tcaacggcct gcaacgccag ctcgaacact tcgatttgca
     4621 gtccgaaacg ctgatgagcg cgatggctgc tatctatgtt gatgtgatta gcccgcttgg
     4681 cccacgcatt caggtcaccg gttcccctgc tgtactgcaa agcccacaag tgcaggcgaa
     4741 agttcgcgca accctgctgg caggcattcg cgccgccgtg ctctggcacc aggtcggcgg
     4801 cggacgtctg caactgatgt tttctcgtaa tcgcctgacc actcaggcaa aacaaattct
     4861 tgctcattta accccggagt tgtgatctat ggaattatcc tcactgaccg ccgtttcccc
     4921 tgtcgatgga cgctacggcg ataaagtcag cgcgctgcgc gggattttca gcgaatatgg
     4981 tttgctaaaa ttccgtgtac aagttgaagt acgttggctg caaaaactgg ccgcgcacgc
     5041 agcgatcaag gaagttcctg tttttgctgc cgacgcaatc ggttaccttg atgcaattgt
     5101 cgccagtttc agcgaagaag ataccgcacg catcaaaacc atcgagcgta ccactaacca
     5161 cgacgttaaa gcggttgagt atttcctgaa agaaaaagtg gcggagatcc cggaactgca
     5221 cgcggtttct gaattcatcc actttgcctg tacttcggaa gatatcaata acctctccca
     5281 cgcattaatg ctgaaaaccg cgcgtgatga agtgatcctg ccgtactggc gtcaactgat
     5341 tgatggcatt aaagatctcg ccgttcagta ccgcgatatc ccgctgctgt ctcgtaccca
     5401 cggtcagcca gccacgccgt caaccatcgg taaagagatg gcaaacgtcg cctaccgtat
     5461 ggagcgccag taccgccagc ttaaccaggt ggagatcctc ggcaaaatca acggtgcggt
     5521 cggtaactat aacgcccaca tcgccgctta cccggaagtt gactggcatc agttcagcga
     5581 agagttcgtc acctcgctgg gtattcagtg gaacccgtac actacccaga ttgaaccgca
     5641 cgactacatt gccgaactgt ttgattgcgt tgcgcgcttc aacaccattc tgatcgactt
     5701 tgaccgtgac gtctggggtt atatcgccct taaccacttc aaacagaaaa ccattgctgg
     5761 tgagattggt tcttccacca tgccgcataa agttaacccg atcgacttcg agaactccga
     5821 agggaatctg ggcctttcca acgcggtatt acagcatctg gcaagcaaac tgccggtttc
     5881 ccgctggcag cgtgacctga ccgactccac cgtgctgcgt aacctcggcg tgggtatcgg
     5941 ttatgcgctg attgcgtatc aatccaccct gaaaggcgtg agcaaactgg aagtgaaccg
     6001 tgaccatctg ctggatgagc tggatcacaa ctgggaagtg ctggctgagc caatccagac
     6061 agttatgcgt cgctatggca tcgaaaaacc gtacgagaag ctgaaagagc tgactcgcgg
     6121 taagcgcgtt gacgccgaag gcatgaagca gtttatcgac ggtctggcgt tgccagaaga
     6181 agagaaagcc cgcctgaaag cgatgacgcc ggcaaactac attggtcgcg ccatcaccat
     6241 ggttgatgag ctgaaataaa ctcgtatcag tgccggatgg cgatgctgtc cggcctgctt
     6301 attaagatta tccgcttttt attttttcac tttacctccc ctccccgctg gtttatttaa
     6361 tgtttacccc cataaccaca taatcgcgtt acactatttt aataattaag acagggagaa
     6421 ataaaaatgc gcgtactggt tgttgaagac aatgcgttgt tacgtcacca ccttaaagtt
     6481 cagattcagg atgctggtca tcaggtcgat gatgcagaag atgccaaaga agccgattat
     6541 tatctcaatg aacatttacc ggatattgcg attgtcgatc tcggattgcc agacgaggac
     6601 ggtctgtcac tgattcgccg ctggcgtagc aatgatgttt cactgccgat tctggtatta
     6661 accgcccgtg aaagctggca ggacaaagtc gaagtattaa gtgctggtgc tgatgattac
     6721 gtgactaaac catttcatat tgaagaggtg atggcgcgaa tgcaggcatt aatgcggcgt
     6781 aatagcggtc tggcttcaca ggtcatttcg ctaccaccgt ttcaggttga tctctctcgc
     6841 cgtgaattat ctattaatga cgaagtgatc aaactgaccg cgttcgaata caccattatg
     6901 gaaacgttga tacgcaataa tggcaaagtg gtgagcaaag attcgttaat gctccaactc
     6961 tatccggatg cggagctgcg ggaaagccat accattgatg tactgatggg acgtctgcgc
     7021 aaaaaaattc aggcacaata tccgcaagaa gtgattacta ccgttcgcgg ccagggctat
     7081 ttgttcgaat tgcgctgatg aaaaaattac tgcgtctttt tttcccgctc tcgctgcggg
     7141 tacgttttct gttggcaacg gcagcggtag tactggtgct ttcgcttgcc tacggaatgg
     7201 tcgcgctgat cggttatagc gtcagtttcg ataaaactac gtttcggctg ttacgtggcg
     7261 agagcaatct gttctatacc cttgcgaagt gggaaaacaa taagttgcat gtcgagttac
     7321 ccgaaaatat cgacaagcaa agccccacca tgacgctaat ttatgatgag aacgggcagc
     7381 ttttatgggc gcaacgtgac gtgccctggc tgatgaagat gatccagcct gactggctga
     7441 aatcgaatgg ttttcatgaa attgaagcgg atgttaacga taccagcctc ttgctgagtg
     7501 gagatcattc gatacagcaa cagttgcagg aagtgcggga agatgatgac gacgcggaga
     7561 tgacccactc ggtggcggta aacgtctacc cggcaacatc gcggatgcca aaattaacca
     7621 ttgtggtggt ggataccatt ccggtggagc taaaaagttc ctatatggtc tggagctggt
     7681 ttatctatgt gctctcagcc aatctgctgt tagtgatccc gctgctgtgg gtcgccgcct
     7741 ggtggagttt acgccccatc gaagccctgg caaaagaagt ccgcgaactg gaagaacata
     7801 accgcgaatt gctcaatcca gccacaacgc gagaactgac cagtctggta cgaaacctga
     7861 accgattgtt aaaaagtgaa cgcgaacgtt acgacaaata ccgtacgacg ctcaccgacc
     7921 tgacccatag tctgaaaacg ccactggcgg tgctgcaaag tacgctgcgt tctctgcgta
     7981 gtgaaaagat gagcgtcagt gatgctgagc cggtaatgct ggagcaaatc agccgcattt
     8041 cacagcaaat tggctactac ctgcatcgtg ccagtatgcg cggcgggaca ttgctcagcc
     8101 gcgagctgca tccggtcgcc ccactgctgg acaatctcac ctcagcgctg aacaaagtgt
     8161 atcaacgcaa aggggtcaat atctctctcg atatttcgcc agagatcagc tttgtcggtg
     8221 agcagaacga ttttgtcgag gtgatgggca acgtgctgga taatgcctgt aaatattgcc
     8281 tcgagtttgt cgaaatttct gcaaggcaaa ccgacgagca tctctatatt gtggtcgagg
     8341 atgatggccc cggtattcca ttaagcaagc gagaggtcat tttcgaccgt ggtcaacggg
     8401 ttgatacttt acgccctggg caaggtgtag ggctggcggt agcccgcgaa atcaccgagc
     8461 aatatgaggg taaaatcgtc gccggagaga gcatgctggg cggtgcgcgg atggaggtga
     8521 tttttggtcg ccagcattct gcgccgaaag atgaataaat atgtccatac ttcacgcatt
     8581 acgttaagca tccgttataa tcggttgcag ataccagcct gtggatgctt aacatggaat
     8641 accaactcac tcttaactgg cccgattttc ttgaacgtca ctggcagaaa cgcccggtgg
     8701 tgttaaaacg cggctttaat aattttattg acccgatctc tccagacgag ttggcgggtc
     8761 tggcgatgga aagcgaagtt gacagtcgac tggtcagtca ccaggatggc aaatggcagg
     8821 tcagccacgg cccgttcgaa agctacgatc atctcggtga aaccaactgg tcattactgg
     8881 tacaggcagt gaaccactgg catgagccga ccgccgcgct gatgcgaccg ttccgtgaac
     8941 taccggactg gcgtattgat gatctgatga tttctttttc tgtacctggc ggcggcgtcg
     9001 gcccgcatct cgatcagtac gacgtgttta tcattcaggg taccggacgt cgtcgctggc
     9061 gagtgggcga aaagctgcaa atgaaacagc actgcccaca tccggatctg ttacaggtcg
     9121 atccgttcga agccatcatc gatgaagagc tggagcctgg tgatattctt tatattccgc
     9181 caggattccc gcatgaaggc tacgcgctgg aaaatgcgat gaactattcc gtgggttttc
     9241 gcgcgccaaa tacgcgggaa ttaattagcg gatttgccga ttatgtgctg caacgtgaac
     9301 tgggcggcaa ctactacagc gatccggatg ttccacctcg cgctcatcct gcggacgttc
     9361 tgccgcaaga gatggataaa ctgcgtgaga tgatgctcga attgatcaac cagccggaac
     9421 actttaagca atggtttggc gagtttatat cccagtcacg tcatgaactg gatatcgcgc
     9481 cgccagagcc gccttatcag ccggatgaaa tctacgatgc gctgaaacaa ggtgatgtgc
     9541 tggtgcgcct gggtggtctg cgcgtattgc gcattggcga cgacgtgtat gccaatggtg
     9601 agaagatcga ttccccgcac cgtccggcac tggatgcact cgccagcaac attgcgctga
     9661 ctgcggagaa ttttggcgat gcgctggaag atccgtcatt cctcgcgatg ctcgcggcgc
     9721 tggtcaatag cgggtattgg ttcttcgaag ggtaagtttg gatttaagcc ggatgcggca
     9781 tcacatgccg catccctttt cgcttacttc cgttgcgccg ttaactcggc aatacggacg
     9841 atcacctgca ccgctttttc cataccttcc agagtcacaa actcatgctt accatgatag
     9901 ttgtaaccgc cagtgaacag gttcgggcaa ggtaatccca taaacgacaa ctgcgcgccg
     9961 tcggtaccgc cgcggatcgg tttcagttcc ggttcaatat cgcagtcacg catcgcctgc
    10021 tgggcgatat cgagaatatg cggatgctca accactttct cgcgcatatt gtagtaactg
    10081 tcttcaatca ccaattcaat gtagcaatca ggatgtaacc ctttgcccac ttttttggcg
    10141 atctccatca ttttacgttt acgcgcttca aactgtttac ggtcgaaatc acggatgatg
    10201 tagtgcatat cggcccgttc aacggtgcct ttcatgctcg ccaggtgata gaaaccttca
    10261 tagccttctg tcatttccgg gctttcatcc gccggaactt ccgcatgaat acgtgccgcc
    10321 agcgacagcg catttaccat cactcctttc gccgtgcccg gatgaacatt gttaccgaca
    10381 attttgatat tgaccgatgc ggcgttgaag ttttcaaact ccagttcgcc tacgccacca
    10441 ccatcaacag tgtaagccca gcgggcatcg aaggcgtcaa catcaaaatg tttcgcccct
    10501 ttgcccactt cttcatccgg ggtaaaggcg acgcgaatat caccatgcgg aatgtttttc
    10561 tgttgcaata ccgccagcgc ggtcatgatt tctgcaatac ctgctttgtc atcggcacct
    10621 aacaaggttt taccatcggt ggtaatcagc gtctgaccca gtagctgatg cagcaccggg
    10681 aacataaccg gtgataaaac ttcatcgccg atacccagcg caatatcgcc accgcgatag
    10741 ttttcaacaa tttgcggatt cacatttttg ccgctgcaat ccggtgaggt atccacatga
    10801 gaaataaagc caatcgccgg gatatcgcca gggacgttag ccggtaacgt cgccatcaaa
    10861 gtgcccttct cacttaaggt cacattgata agccccatct cttcgagctg ctctttcagc
    10921 agatgcaata acttccattg gccttccgtg ctgggaacct gtctcacccc tgcttttgat
    10981 tgggtatcca gagacacgta gttcaaaaat cgctcaagta gtttatccat gtagtcaccc
    11041 tcactttttg tgacaacatt attaagaagc aagaaaagac aaatattgcg tcaggtcact
    11101 tttacccctg caagcgggaa tatttatcag cattacctta atgaatataa agctaagcca
    11161 gtaattcaca acaaagattg gcgattcaag cggtttgccg tagaattacc gccctcatta
    11221 agagtcacca aggtggttaa ccacaaaccc cgcatcggta agccatccgt tgcgtttaca
    11281 tgggacagag taaaaaattg aataaacaac cgagttcgct ttcaccgctg gtgcaattgg
    11341 cgggaattcg caaatgcttt gatggtaaag aggtcattcc ccagctggat ctgactatca
    11401 acaatggcga gttcctcacg ctgcttggcc cttctggctg cggtaaaaca accgttcttc
    11461 gcctgattgc aggtctggaa actgttgatt ccggacgcat catgctggat aacgaggaca
    11521 tcacccacgt tccggcggaa aaccgctttg tgaacactgt tttccaaagc tacgcacttt
    11581 tcccccacat gaccgtgttc gaaaatgtgg cctttgggtt gcgcatgcaa aaaacccccg
    11641 ctgctgaaat tacgccccgc gtgatggaag ccctgcggat ggtgcaactg gaaaccttcg
    11701 ctcaacgtaa accgcatcag ctctctggtg gtcaacagca acgcgtcgcc attgctcgcg
    11761 cggtggttaa caagcctcgt ctgttgttgc tggatgagtc gctctcagcg ctggattaca
    11821 aactgcgtaa gcaaatgcag aacgagctga aagcgttaca gcgtaagctt ggcattacat
    11881 tcgtcttcgt gactcacgac caggaagaag cactcaccat gtcagacagg attgtggtga
    11941 tgcgcgatgg tcgcattgag caagacggca cgccgcgtga aatctacgaa gagccgaaaa
    12001 acctgtttgt tgccggcttc attggcgaaa tcaatatgtt taacgccact gtcatcgaac
    12061 gtctcgacga gcagcgcgta cgcgccaacg ttgaaggccg cgaatgtaat atctacgtta
    12121 acttcgccgt tgaaccgggg caaaaactgc atgttctgct gcgcccggaa gacttacgtg
    12181 ttgaagagat taacgacgac aaccacgctg aagggctgat tggttacgtt cgcgagcgta
    12241 actacaaagg catgacgctg gagtcggttg ttgaactgga aaatggcaag atggtgatgg
    12301 tcagcgaatt cttcaatgaa gacgatcctg actttgacca ctctctcgac caaaaaatgg
    12361 ccattaattg ggtagaaagc tgggaggtcg tactggctga tgaagaacac aagtaagttc
    12421 cagaatgtag tgattgtcac tattgtcggt tggcttgtgt tgtttgtctt tctgcccaac
    12481 ctgatgatca ttggcaccag ctttttgacc cgcgacgacg ccagtttcgt caaaatggtc
    12541 tttacgctgg ataactacac acgtctgctc gatccgctct attttgaagt gctattgcac
    12601 tcgctgaata tggcgctgat cgccaccctc gcctgcctgg tgctgggcta cccgtttgcc
    12661 tggtttctgg cgaagctgcc acacaaggtg cgtccgctgc tgctgtttct gctgattgtt
    12721 cccttctgga ccaactcact gattcgcatc tacgggctga aaattttcct cagcaccaaa
    12781 ggctatctca acgagttttt gctctggctg ggcgttatcg acacaccaat ccgtatcatg
    12841 ttcacgccca gtgcggtgat tatcggtctg gtttacattc tgctgccgtt tatggtgatg
    12901 ccgctgtact ccagtatcga aaaactggat aagccgttgc ttgaggcggc gcgcgatctc
    12961 ggtgccagca agttacagac ttttatccgc atcattattc cactgacgat gccggggatt
    13021 attgccggat gtctgctggt gatgctgcca gcgatgggcc tgttctatgt gtccgacctg
    13081 atgggcggtg cgaaaaacct gctgatcggt aacgtcatca aggtacagtt cctcaatatt
    13141 cgtgactggc cgtttggtgc agccaccagc attacgctga ctatcgtaat gggcctgatg
    13201 ttgctggttt actggcgcgc ttctcgtctg ctgaataaaa aggtggaact cgaatgatcg
    13261 gtcgactgct tcgcggcggt tttatgaccg ctatctacgc gtacctgtat atcccaatca
    13321 ttattttgat tgtgaactcc tttaacagct cgcgctttgg catcaactgg cagggtttta
    13381 ccaccaaatg gtatagcctg ctgatgaaca acgatagcct gttacaggca gcgcagcatt
    13441 cactaacaat ggcggtgttt tcggcgacgt ttgctacgct tatcggttca ctgacggcag
    13501 ttgcgctgta ccgttatcgc tttcgcggta agccgttcgt tagcggaatg ctgtttgtgg
    13561 taatgatgtc accagatatc gtgatggcaa tttcgctgct ggtgctgttt atgctgctgg
    13621 gtattcagct tggcttctgg tcgctgctgt tctcgcatat caccttctgc ctgccatttg
    13681 tggtggtgac ggtgtattcg cgcctgaaag gttttgacgt gcggatgctg gaagcggcga
    13741 aagatctcgg tgccagcgaa tttaccattc tgcgaaaaat cattctgcca ctggcaatgc
    13801 cagcggtggc ggcgggctgg gtgttaagct ttaccctgtc gatggacgat gtggtagttt
    13861 cttcgttcgt caccggacca agttatgaaa ttctgccgtt aaaaatttat tcgatggtca
    13921 aagtcggcgt atcgccggaa gttaacgcgc tggcaaccat attactggtg ctgtcgctgg
    13981 tgatggttat tgccagccag cttattgctc gtgataaaac gaaaggtaac acaggggacg
    14041 ttaaatgaaa aaatggtcac gccacctgct cgcggcgggt gctctggcac tgggcatgag
    14101 cgccgctcac gccgatgaca acaacacgct gtatttctac aactggaccg agtacgtgcc
    14161 gccaggactg cttgaacagt tcaccaaaga aaccggtatt aaggttatct attcgactta
    14221 cgagtcgaac gaaaccatgt acgccaagct gaaaacgtac aaagacggtg cctatgacct
    14281 ggtggttcct tcaacctatt acgtcgataa aatgcgtaaa gaggggatga tccagaagat
    14341 cgacaagtcg aagttaacga acttcagcaa tctcgatcca gacatgctca acaagccttt
    14401 tgacccgaat aacgactact ccattccgta tatctggggt gcgacggcga ttggtgttaa
    14461 cggtgatgcg gtggatccga aatctgtcac cagttgggcc gatctgtgga agccagagta
    14521 caaaggcagc ctgctgttga ccgacgatgc ccgtgaagtg ttccagatgg cgctgcgtaa
    14581 gctgggctac tccggtaaca ccaccgatcc gaaagagatt gaagctgcat ataacgagct
    14641 gaaaaaactg atgccaaacg tcgcagcgtt taactccgat aacccggcta acccgtacat
    14701 ggaaggcgaa gttaacctcg gcatgatctg gaacggttct gctttcgttg cacgccaggc
    14761 gggtacgcct attgacgtgg tgtggccgaa agaaggcggc atattctgga tggacagcct
    14821 ggcgatcccg gcaaatgcca aaaacaaaga aggcgcgctg aaattgatca acttcctgct
    14881 gcgcccggat gtggcaaaac aggttgctga aactatcggt tatccaacgc caaaccttgc
    14941 ggcgcgtaag ctgttaagtc cagaagtggc gaacgataag acgctctacc cggatgctga
    15001 aaccattaaa aatggcgaat ggcagaatga cgttggcgca gccagcagca tttatgaaga
    15061 gtattatcag aagctgaaag caggacgtta attcagcaag cgggcggtgg tattaccgcc
    15121 cgttttttag ttagcaagga tgtggctaat gagtcaggac agtaaagttt tatcccgctc
    15181 tttcgtcggt attgtggtcc gcttgtaggc ctgataagcg tagcgcatca ggcaatgctt
    15241 cctgctttat aatcccttca gcaacttttc aacaaattct ggcaccacct ggcttgccgg
    15301 gccgtaatat ttctcggcaa attcattacc gacctgactt ggttcgagat tcagttccac
    15361 ggtgtgcgcg ccatgcagtt tcgcttcgtg aacaaaccca gccgccggat aaacatgccc
    15421 ggaagtacca atggcaatga aaatatcagc catcgacaac gccatataaa tttcatccat
    15481 gccgagtggc atttcgccaa accaaacgac gtgcgggcgc aagggtgccg ggaactggca
    15541 acaatggcat ttatcttctg gcgtaacgtc tccggtccag tcgagaacct gaccactttg
    15601 cgaacaacga actttcagca attccccatg catatgaatg acattggtat tacctgcgcg
    15661 ttcatgcagg ttgtctatat tctgcgttac cagcaaaaag cgatcgccga gggcgtcttg
    15721 cagtttagcc agcgcaagat gcgcggcgtt aggctgaatt tctggctgct gcagctgtcg
    15781 acgacgggcg ttataaaacg cttgcaccag ttcaggatcg cgatcgaaac cttccggcgt
    15841 tgccacatct tcaacccgat gttcttccca caggccatct gcggcgcgaa aggtacgaat
    15901 acctgattcc gcagaaatcc ctgcccctgt cagtacgagt actcttggtt tttccattgc
    15961 ttccggcacc actttatctc tgaaaaaaat acgctgacgc aaacgctcgc gcaggcggcg
    16021 tttattttta cgaaaacgac ttaaccgatg accccgacgc gacagcatag caacctctgt
    16081 tgtttaatcg gttagatgtt ggaaggccgc gccgcgcata ccacctgcat ctccatgacg
    16141 cgcacattca atacgcggta cacgagctac aggtaacaga tgccggggca acctgtccgc
    16201 cagttgtgtt gttattgcag taaagtttga taatccgccg ccaatcacca ccagatcagg
    16261 gtcaacaata gtcaggatat ttcccagaca cactgccagc aaatccagat agcgatcaac
    16321 gtgtgccagc gcccgttcat cgccttcttc ccataaggca ataatttcag gagcctgcaa
    16381 cggttgatga taatagtgtt gccagagcca cgcaaagccc cgacctgata gataattttc
    16441 gatacaacca atttgaccac agccgcagcg gcgtaacggg aaatccaacc ccatcatggt
    16501 taacgcatca accggcagac gcatatggcc aaactcgccg gtaatgtagc ttttaccggt
    16561 aatcggtttg ccgttgaaaa tcagcccacc gccaacgccg gtaccaagaa tcaaccccat
    16621 caccagtgga tattgcgtaa attcatcatc ccaggcttct gaaagggcaa aacagttggc
    16681 atcgttatca aggcgtacat cgcgatcaag acgtgcgctc aggtcggcac gcagcggttt
    16741 accgctggca gcggggacat tggcggcata cagcgtacca tcttctgttt ccggcattcc
    16801 cggtataccg atgccgacag aacctctaca gccaaaacgt tgatcagctt cggctaccag
    16861 ctcgcacact gcatctaaaa atgcgtcata gctgtcacgc ggtgtcggca cccgcttttc
    16921 ccactgcaac tgccgaccgc tatcaaacac gccaagcgca atttttgttc caccaatatc
    16981 aaacccgtaa tacattgccg ctccttgttt taatgtactg cctttactgg ccgctaagga
    17041 ctcgcgcagg gtcaatatta ctggcgcgcc gcgccggata ccaacttgcc aaaagactca
    17101 gcaacaatgc tgtgaccagt acgtagaaga cgtccagcca gtgcaattcc gatggcagga
    17161 aatcaataaa atagatatcg ctggagagga actgatgacc gatcaacttt tcaatccact
    17221 caataatcgg ggtaagttgc agtgaaacca ccacaccgat aatcacccca cacaggctgc
    17281 cgaacagccc tgccagcaat ccataccaga caaagatggc gcgaattaaa ccatctttcg
    17341 cccccagcgt tcttaatact gcgatatcgc cactcttgtc tttcaccgcc atcactaagg
    17401 tggagacgat gttgaaacag gccacgccaa tcaccagtac catcgccaga tacataatgg
    17461 cgcggatcat ctggatatcg cgatacatat agccgtaagt accaatccaa cttttaatat
    17521 aaacatagct gttggtcact tcacccgcat cgcgtaccag cttattggcg ttgaaaacat
    17581 ccgtcatttt aagggcaata cctgacacgc tggaacccat atcaagatat tgttgggcat
    17641 ccgccagcgg gatcatggca aaactgtgat cgagttgacc actcaactgc aaaataccgg
    17701 caacgtgcaa acgcacacgt tttggctgca tcagtttatg ctcaggattc gagttgggga
    17761 tcatgatcga cacccaatcg ccctgcttca ctttcagcgc atccgccacg cctttgccga
    17821 tgataatttg ctgttcgccc gctttaaaat tgcgccaggc atccccctga acaaacgagg
    17881 gtaatgcgct cagacgctgt tcctgttgcg ggttaacgcc cttcacctgg attgcgcgca
    17941 gattggcacc actttctacc agtccggtga aattgatata cggcgcagcg gcggcaatac
    18001 ccggcacttt ctgcacgtta tccagtgctt cctgccagtt agtccatggc tgatttaccg
    18061 cttctatttc gccatgcggc accaccgcca gaatgcggtt attcagttcg cgttcaaagc
    18121 cgttcatcgc gcttaagccg acgatcaata ccgccacgcc gagggcaatg ccaatggtag
    18181 aaatgacgga gatcagcgac accatgccgc cgcgccgccg tccgcgacta aaacgcaggc
    18241 caatcaataa cgataaaggc atcgccatta ctccgccccc atcaggctca gttccgccgt
    18301 cagacgacca tcacgcatct ccagttggcg gctcatacgt ttcgccagtt gcaggtcgtg
    18361 agtaaccacc aggaaggcgg tgccctgcaa gcgattcaat tctccaagca actggaagat
    18421 gctgtcggcg ttacgtgcat caaggttacc ggttggttca tccgccagta ccagacgcgg
    18481 gttattcacc agcgcacggg caatcgccac acgctggcgt tcgccgccag aaagttcaga
    18541 tgggcggtga ttcgcacgat gctccagccc caccgctttt aacatatcaa gtgcacggct
    18601 gttgatttca gcgggctttt tcttgccaat cagcagcggc atagccacgt tttccagggc
    18661 ggtaaaatcc ggcagcaggt ggtgaaactg ataaataaag cccagcttct ggttgcgcag
    18721 ttctgctttc gccgccgaag acagtttgct catcggttga ccgttaaaga tcacatcgcc
    18781 ggaggttggt gtatccagcc cgcccagcag gtgcagcaag gtacttttac cggaaccaga
    18841 gctaccgacg atcgccatca tttcaccttc gcccacgctg aaactgacat tgtgcagtac
    18901 atcggtttgc acactgcctt cctgatagcg tttgcacagg ttgtcgcatt gcaacaggat
    18961 cttattcata acgtaaagcc tcagcgggtt gtgtggcggc agcgcgccat gaagggtaaa
    19021 gcgtagacag cagcgcgata gccatcgcca ccagcgcaat aacaatgacc tgtaaaggtt
    19081 cgatagccac cggcagcgcc gcgccatcaa gcaggacgcc gattatcggc atcagattat
    19141 ttaactggct ggcaagcagt gcgccaagcg ccgctccgag gatcgcaccg ataatcccgg
    19201 cgctggcccc ttgcaccata aagaccatca tgatttgtcg cggagttaag ccttgcgttt
    19261 gcaggatcgc tacttcgccc tgcttctcca tcaccatcag ccccagcgag gtaataatgt
    19321 taaacgccgc aacggcgaca atcaggctca gcagtaagcc catcatattt ttttccatgc
    19381 gtacggcctg gaacagctcg cctttacggt cacgccagtc ctgccatttg ctgccttcag
    19441 gcagtttttg ctgacttaaa gagtcaactt tcagcggctc atccagccac aaacgccagc
    19501 cggtaatatt gcctgccgga taacgcatca gacgcgaggc atcctcaata ttcaccagca
    19561 tttcattgcc atcgacttca ctgttggcgg cgaaagtgcc aatcacattg aacaggcgct
    19621 gacttggaat acgccccatc ggcgtgaact ggctggcaga tggtaccatc atgcggattt
    19681 gatcaccgcg attaacgcct agctgtgagg caagttgttc gccgaggatg acattatatt
    19741 tccccggctc gaggtcagtt tgtttcacat tgaccagata cggcgttagt ggatcttttg
    19801 gcgccgggtc gataccgagc atcaccccga ccgccacgct gcgcgcgctt tgcagtacca
    19861 catcaccggt agtaataggt gcgacgcgat taacgccgtc cagtttgact gccgtttccg
    19921 ggagttgctg cgggttaaga gagccatgct cagaagagag aattgcctgt ggcatcaggc
    19981 caaggatgtt gttttgcagc tcgcgctcaa agccgttcat cactgacaat actgtgacca
    20041 gcgccatcac cccgagggta atgccgatgg tagaaagcca ggagacgaaa cgaccgaagc
    20101 gatccgctgc acgcccacgc atgtaacgca ggccaataaa tagagcgaca ggttggtaca
    20161 tgaaatccgt ctggttgctg tagcaaagac acgagtatat aagcgaaagc aagatgggta
    20221 aacgtctgaa ctgtaagtga tcgtcaaggc taatctgaaa agcccccgta aatcaatcgg
    20281 ctaaattgcc atgttttatc atcaatcttg ccgcctgatc ttaatctgaa aaatcatcca
    20341 atacagacag atacccatta cacctcgggt cataacccgc aggatcaacc gcatgtaaat
    20401 aaaaaaagag cgtgttgtcc tgatgaaaca aaaagagcta tggattaacc agatcaaagg
    20461 gttatgtatt tgtctggtcg tgatttatca ctcggtcatt accttttatc cgcatctgac
    20521 cacttttcag catccgttat cggaagtcct gagcaaatgc tggatctatt tcaatcttta
    20581 ccttgccccc tttcgtatgc cggttttttt ctttatatcc ggctatttga ttcgccgcta
    20641 tatcgacagc gtaccgtggg gaaattgtct cgataaacgg atctggaaca tcttctgggt
    20701 gctggcgctt tggggcgtgg tgcagtggct ggcgttaagt gcgctgaacc agtggctggc
    20761 acctgagcgc gatttaagca atgccgctta tgccgattcc accggtgagt tcctgcacgg
    20821 gatgatcacc gccagcacca gcttgtggta tctgtatgcg ttaattgtct atttcgtggt
    20881 atgtaaaatt tttagccgtc tggcgctgcc actattcgcc ttgtttgtac tgctgagtgt
    20941 ggcggttaat ttcgttccca cgccgtggtg gggaatgaac agtgtgatcc gcaatttgcc
    21001 ttattacagc cttggcgcat ggtttggcgc aacaataatg acctgtgtta aagaggtgcc
    21061 gttgcgccgc catctgctga tggcttcttt gcttaccgtt ctggcggtcg gtgcctggtt
    21121 gtttactatc tcgctgctgt tgtcgctggt atcgattgtg gtgatcatga agctgtttta
    21181 tcaatacgag caacgattcg gtatgcgctc caccagcctg ctgaatgtga ttggctccaa
    21241 caccattgct atctacacca cccatcgcat tctggttgaa atattcagct taactctgct
    21301 tgcgcaaatg aatgcggcac gctggtcgcc gcaagtcgaa ctgacactcc tgctggttta
    21361 cccctttgtc agtttgttca tctgtactgt tgcgggcttg ctggtaagaa aactttcaca
    21421 gcgcgcattc agcgatctgt tgttctcccc gccttctctg cccgctgccg tcagttactc
    21481 ccgctaagcc atcgccccag ccggggcgat tcaatttgct aaaccatgtc gattacggat
    21541 aatgaacagc attgcttatc agagatatgc ccccatatgt tgaggcatat cctaacgaga
    21601 atctgacaac cgttatgcct gaacaatatc gttatacgct gcccgtcaaa gcgggtgagc
    21661 agcgtctgct gggcgagtta accggcgctg cctgcgcgac gctggtagcg gaaattgccg
    21721 aacgtcacgc cggtccggtg gtactcattg caccagatat gcaaaatgct ctgcgtttgc
    21781 atgatgaaat cagccagttt accgatcaaa tggtgatgaa tctggcggac tgggaaactc
    21841 ttccctacga cagtttttcg cctcatcagg acattatctc ctcgcgcctt tccacccttt
    21901 accagctacc gacgatgcag cgtggcgtac tgattgttcc ggtgaatacg cttatgcagc
    21961 gcgtttgccc acacagtttt ctccacggtc atgcgctggt gatgaaaaaa ggtcagcgcc
    22021 tgtcacgaga tgcattacga acccaactgg acagcgccgg ttatcgccat gttgaccagg
    22081 tgatggagca cggcgaatac gccacgcgcg gcgcgttgct ggatctcttc ccgatgggga
    22141 gtgagctgcc ttatcgtctt gatttctttg atgatgaaat cgacagcctg cgggtgtttg
    22201 acgtcgacag ccagcgcacg ctggaggaag tagaagcgat caatctgctg cccgcgcacg
    22261 aatttccgac cgataaagcg gcaattgaac tgttccgcag ccagtggcgc gataccttcg
    22321 aagtgaagcg cgatccggaa catatttacc agcaagtgag taaaggcaca ttacctgccg
    22381 ggatcgagta ctggcagcca ttgttcttca gcgaaccact gccgccgctg ttcagttatt
    22441 tccctgccaa taccttgctg gtgaatactg gcgatctgga aaccagtgcc gaacgtttcc
    22501 aggctgacac gctggcgcgt tttgagaatc gcggcgtcga tccgatgcgc ccgctgttgc
    22561 caccacaatc gctctggctg cgggtggacg agctcttctc agagctgaaa aactggcccc
    22621 gagtgcagct aaaaactgaa catttaccga caaaagccgc gaatgccaat ttaggtttcc
    22681 agaaactgcc agacctggcc gttcaggcgc aacaaaaagc gccgctggat gcgctgcgta
    22741 agttcctcga gactttcgac ggtccggtgg tgttctcggt agaaagtgaa ggtcgccgtg
    22801 aagcgctggg tgaactgctc gcacgaatta aaattgctcc gcaacgcatt atgcgtcttg
    22861 atgaagccag cgaccgtggg cgttatctga tgattggcgc tgccgaacat ggttttgtcg
    22921 ataaggtgcg taatctggct ctgatctgcg aaagcgatct gctcggtgaa cgtgttgccc
    22981 gccgtcgtca ggattctcgc cgcaccatca accccgatac actgatccgt aaccttgcgg
    23041 agctgcatat tggtcagccg gtggtccatc tggagcacgg cgtcggtcgc tatgccggaa
    23101 tgaccacgct ggaagctggc ggcattactg gcgagtacct gatgctcacc tatgccaacg
    23161 acgccaaact gtatgttccg gtgtcgtcac tgcatctgat tagccgttac gcaggtggcg
    23221 cggaagaaaa cgccccgctg cataaacttg gcggcgatgc gtggtcacgc gcgcggcaga
    23281 aagcggcgga aaaagtgcgt gatgtggcgg cggaattgct ggatatctac gcgcaacgcg
    23341 ccgccaaaga gggcttcgcg tttaaacacg atcgtgagca gtatcagttg ttctgcgaca
    23401 gcttcccgtt tgaaaccacg ccggatcagg cgcaggccat taatgcggta cttagcgaca
    23461 tgtgtcagca gttggcaatg gatcgtctgg tgtgcggcga tgttggcttt ggtaaaacag
    23521 aagtggcgat gcgcgccgct ttcctggcag tagataacca caagcaggta gcggtgttgg
    23581 tgcctaccac ccttcttgcg cagcagcatt acgacaactt ccgcgaccgt ttcgccaact
    23641 ggccggtacg tatcgaaatg atctcccgtt tccgcagcgc caaagagcag acgcaaatcc
    23701 ttgcggaagt ggcggaaggg aaaatcgata ttctgatcgg tacgcacaaa ctgctgcaaa
    23761 gtgacgtcaa gtttaaagat ttaggcctgc tgattgtcga tgaagaacac cgcttcgggg
    23821 tgcgtcataa agagcgcatt aaagcgatgc gcgcgaacgt ggatattctg acgcttactg
    23881 caacgccgat cccacgtacg ctgaatatgg caatgagcgg aatgcgtgac ctgtcgatta
    23941 tcgccacgcc gcccgcccgt cgtctggcag ttaaaacctt tgtccgtgag tatgacagcc
    24001 tggtggtccg ggaggcgatc ctgcgtgaaa ttttgcgcgg aggacaggtt tattatctct
    24061 acaatgatgt ggaaaacatt cagaaagccg ccgaacggct ggcagaactg gtgccagaag
    24121 cgcggatcgc catcggtcac gggcagatgc gcgagcgcga actggaacgg gtgatgaatg
    24181 atttccatca tcaacgtttc aacgtgctgg tttgtacaac cattatcgaa accgggatcg
    24241 acatcccgac agccaacacc attatcattg aacgcgcgga tcacttcggt ctggcgcagc
    24301 tgcaccagtt acgcggtcgc gtcggacgtt cgcatcatca ggcatatgca tggttgctga
    24361 caccgcatcc aaaagcgatg actaccgatg cgcaaaaacg tcttgaagcg attacctcgc
    24421 tggaagatct cggggcaggt tttgcgctgg caacgcacga tctggagatt cgcggcgcgg
    24481 gtgaactact tggcgaagaa caaagcggct caatggaaac catcggtttc tcgctgtata
    24541 tggagttgct ggaaaacgcc gtcgatgcac tgaaagccgg acgcgagccg tcgctggaag
    24601 atctcaccag ccagcaaaca gaagtcgagc tgcggatgcc gtcgctattg ccagatgatt
    24661 tcattcctga cgtgaatacg cgtttgtcgt tctataaacg tattgccagc gccaaaacgg
    24721 aaaacgaact ggaagagatc aaagtcgagc ttatcgatcg cttcggcctg ctgccagatc
    24781 cggcgcgtac cctgctggat attgcccgtc tgcgccagca agcgcagaaa ctggggatca
    24841 ggaagctgga aggtaatgag aaaggcgggg tgatcgaatt tgccgagaag aatcacgtta
    24901 atccggcctg gttgattggt ttgctgcaaa aacagccgca gcattaccgc cttgatggtc
    24961 cgacgcgcct gaaatttatt caggatttga gtgagcggaa aacgcgtatc gaatgggtac
    25021 gccagtttat gcgtgaactg gaagagaacg cgatcgctta atggtaaatc gggggcgttt
    25081 ctgcgccccc atctgcaaca tttacaaatt ctttgcactt ccctgcacta tccgacactg
    25141 tcaccatcca taattcaggc ttatctgttt attacaataa ccttatattt attatggatt
    25201 tttagtgatg atcaaaacgc gtttttctcg ctggctaacg ttttttacgt tcgccgctgc
    25261 cgtggcgctg gcgctaccgg caaaagccaa cacctagccg ctgccgccag cgggcagtcg
    25321 tctggttggc aaaaacaaat ttcatgtggt ggaaaatgac ggtggttctc tggaagccat
    25381 caccaaaaaa tataacgtcg gctttctcgc tctgttacag gctaaccccg gcgttgatcc
    25441 ttacgtaccg cgcgcgggca gcgtgttaac gatcccgttg caaaccctac ttccagacgc
    25501 gccgcgcgaa ggcattgtga tcaacattgc ggagctgcgt ctctattact acccgccggg
    25561 taaaaattcg gtaaccgtgt atccaatagg tattggtcag ttaggtggtg acacgctgac
    25621 accgacaatg gtgaccaccg tttcagacaa acgtgcaaac ccaacctgga cgccaacggc
    25681 aaacatccgc gcccgttata aagcacaggg aattgagttg cctgcggtag tgccggctgg
    25741 accggataac ccaatgggcc atcatgcgat tcgtctggcg gcctatggcg gcgtttattt
    25801 gcttcatggt acgaacgccg atttcggcat tggcatgcgg gtaagttctg gctgtattcg
    25861 tctgcgggat gacgatatca aaacactctt tagccaggtc accccaggca ccaaagtgaa
    25921 tatcatcaac actccgataa aagtctctgc cgaaccaaac ggtgcgcgtc tggttgaagt
    25981 acatcagccg ctgtcagaga agattgatga cgatccgcag ctgctgccaa ttacgctgaa
    26041 tagcgcaatg caatcattta aaaatgcagc acaaactgac gctgaagtga tgcaacatgt
    26101 gatggatgtc cgttccggga tgccggtgga tgtccgccgt catcaagtga gcccacaaac
    26161 tctgtaaatc ctggataaaa aaaatccccg cgacacggca tatcgcgggg aaaaaatcag
    26221 cagtagcagg cattaatgag ggttaatgct tatttataaa ttactgctgt tccatggagg
    26281 gtattcggac cggttacaga agtaatacgg aaagattttg cgcccatctc atccgctttt
    26341 tgcgccagct gctcttccag cgatcccaga tttgtccccg cgttagcact gatagtaccg
    26401 actttttgtt gaccttctgg cgttgactga acttcgacag ccgcaaagct ggcaaatgac
    26461 atggagctta aaatcgccgc agcgatgagg gtttttacgt ttttcataat agtggcctta
    26521 tgcagatgaa tgacgtcgca agcaattact taacgatcga taactaaatg atagatgtga
    26581 tctggatcac atacaagata ttttttataa caatcattaa ttaatttaaa aatctttaaa
    26641 tttcagtcaa atagaaagca attattttta tggggtctgg actggtgaac ggaggtgatt
    26701 atttttataa taaccttaca ttcacagtca ccaggtacaa cggcatcatg gcaactgact
    26761 caacacaatg tgtaaaaaaa agccgtggcc gcccaaaagt gttcaacagg gatgccgcgc
    26821 ttgataaggc catgaaattg ttctggcaac acggttatga agcgacttct cttgcggacc
    26881 tcgtcgaagc gaccggagcc aaagcgccca cgctatacgc ggaatttacc aacaaagagg
    26941 ggttatttcg tgccgttctc gaccgctata tcgatcgttt tgccgctaag catgaagcac
    27001 agctgttttg tgaagagaaa agcgtggagt ctgcgctggc tgactatttt gctgccatcg
    27061 ccaactgctt taccagcaaa gacaccccgg caggctgctt catgatcaac aactgcacca
    27121 ccctctcccc agattcagga gatatcgcca atacgttgaa atcacgccat gcgatgcaag
    27181 agcgcacttt gcagcagttt ttatgtcaac gacaagcgcg cggggaaatc ccgacccact
    27241 gtgacgtgac acatctggca gaattcctta attgtattat tcaggggatg tcgatcagcg
    27301 cacgcgaagg tgcatcgctg gaaaaactga tgcagattgc cggaacgact ttgcgtttat
    27361 ggcccgaact ggtgaaataa gtcgcaaaaa aagcccctca gcctgagcga atgaggggcc
    27421 aaattgcaga gtacagcctt gttatacttt gttattcaaa atcagttgcc cgttactatc
    27481 tagcgggatc tgcgtacccg gatcgcggtc catgcggatt ttgccctgct gatcgccaat
    27541 cttataggtc acatcataac cgagcatttt ttctgacttg tcatacaccg ttttacaacg
    27601 ctgttgcgta gtcgtgtaag tatcgctttc ctggagagag ccctggatct ggttaccggc
    27661 atatccacca cccagcgccc ccacaacagt ggcgacatct ttaccacgac caccaccaaa
    27721 ctgatgccct atcacgccgc cagcaacagc gccgagcacc gacccggtaa tgcgattttc
    27781 atcctgcacc ggtcgacgat gggtcactgt gacgttgcga cactcctgac gcggtgtttt
    27841 aaccgtttcc ttgattgggg ttgcagaaac aacctgagcg tattgcgggc cccgttcaaa
    27901 cacgttcaga ctggccactg ccgctacgcc cagcgcagct gcaacaccaa tcccgatacc
    27961 cgccaacatt gatttattca cgggaacacc tccttctttg cagttatgcc aatcatgcaa
    28021 gcgaaggaga aaagcagcta tcagacagaa gatgaaaagc gcgggaatgg ctggaaatac
    28081 ttaaggattc ggaggagtct gaaggaatgc ctgatgcgac gcttaacgcg tcttatcagg
    28141 cctaccgctc gtaccatttg tccagggcgg atgaggcgtt tatgccacat ccgccagtgt
    28201 acgtcgatta atgcaacttc aaacgcggac ggataacgcg gttaatactc cccaccagca
    28261 tcattaatcc ggttttaaag taaccatgca gcgcaatctg atgcattcgg tatagcgaga
    28321 tatatacaaa gcgcgcaatt cgtccttcaa tcatcattga gccgcgcgtc aggttaccca
    28381 tcaggctacc gacggtggag aagttcgaca gcgataccag cgaaccatga tctttatact
    28441 gataattttt cagcggctta ccgttcatct gcgccagaat gttgttcatt gcgcaagtcg
    28501 ccatctggtg tgcagcctga gcacgcggcg gaacaaagcc cccttccgga cgcgggcatg
    28561 acgcgcagtc gccaatagcg taaatgtctg gatcgcgggt ggtttgcagc gtcggttcca
    28621 ccaccagctg gttgatacgg ttagtttcaa gaccaccgat atctttcagg aagtctggcg
    28681 ctttgatccc ggctgcccac accatcagat cagcctcaat atattcacca tctttagtgt
    28741 gcaggccgcc ttcatcagca ctggtgacca tggtttgcgt cagcacgcga acgccaagtt
    28801 tcgttaactc actatgggcc gcagcagaga tgcgtggcgg taatgcaggc aaaatacgtt
    28861 ctcccgcttc taccagcgtt acgttcaggg cttcgttggt cagaccttta taaccgtagc
    28921 tgtgcagttg cttgaccgcg ttatgcaact cagcggagag ttctacaccc gtcgcgccgc
    28981 caccgacaat cgcaatgttc actttgccat tcgcgcccag gttggcggag tatttcagga
    29041 acagattcag catctcctgg tggaagcgac gcgcctggtg cgggttatcg aggaaaatgc
    29101 agttctcttt gacacctggt gtattgaaat cgttagaggt gctacccagc gccattacca
    29161 gtgtgtcata ggcgatttta cgttccggaa ccagcagttc acctttctcg tcgcgcagtt
    29221 ctgcaatagt gattgttttc gcttcacgat caatatcaat gacggaaccc agctggaact
    29281 ggaaaccatg attgcgcgca tgggccagat agctcaacgc atcgacgcct tcatcaagcg
    29341 agccagtcgc cacttcgtgc agcagcggtt tccacagatg gctgtggtta cgatcgacca
    29401 gcgtaatttt ggcttttttc ttgcgtccca gcttatgccc cagctgtgtt gccatttcca
    29461 gcccaccagc accgccgccg acaatcacaa tttttttcaa tggcgtagtc aacgtgaccc
    29521 ccttaaattt attaaccaat tgttaattaa tggttataaa catagctctt aattaacaac
    29581 aggttacagc aatgaaaatg ttcttcgcta ttgagaataa catgaatggt gcattggtca
    29641 taccaaaatt gatgttaatc aagttttgtt gctgaaaaga taggcgactt taccgggtga
    29701 gatcaaaaaa cagagtttat tatttgagca agtccggaag ggtgatatag ggtgacgcgt
    29761 atatcgaggg cgtttggtcg tcctgataag atgcgcagca tcgcatcagg cattgatgct
    29821 cgactgtcgg atgcggcgta aacaccttat ccgatccaca gaatccggag cgcatcaggt
    29881 accggcaagg ttacctgatg cgacgagggc atttacccga gggttttgaa cgctttaatg
    29941 cgctgtaaat gcggggagat attcttgaat ttgtgcgtct gctcttcgtc ccagacaatc
    30001 tcgtaataat gatgcaactc ttcagatgtc cgctggctgt taagcgcttc atcattacgc
    30061 gacaaaatca ccaggcaacg atcgcgattc ttctcacgga agttggtcac acacttagtg
    30121 gcaatatcgg catactcttc cgggcgatca atcttgcctt ccatgttctc ataagggaac
    30181 aaattagggt tgaagatcac ctggcggatg tcgcaaagaa aaccaatccg ttccgcccag
    30241 tatccgccca agccaacgcc gcaaattagc ggacgctcgt caacgttcag ttgcaacatt
    30301 ttgtccactt ctttaagcag atgctgcata tcatgtttcg gatgccgcgt actgtagctt
    30361 atcaagcgta catccgggtc aataaactgc aattgtaaga ctttctcgtg gttacccgga
    30421 ctgttagagt caaaaccgtg taaatagata atcatcgctt cctcacataa gccagggtta
    30481 gtgacctgct ttctcttcct gccagcgttc atgtaactga ttcagacggg tgctgatcgc
    30541 tttccagcga gccgagtcca tcagttcctg tcgcgaaaat gaacctttat gatacaaacg
    30601 tgtaacacgt tctgccttga tcggtgacag attatctaac acgctgacgg cccctttacg
    30661 attattgcag accaggatca tatcgcaacc cgcatccagt gatgcctgcc cgcgttcggc
    30721 ataactgccc ataatcgcgg caccttccat cgataaatcg tcagagaaaa tcacgccgtc
    30781 aaaacccagt tcctgacgca aaacggtttt cagccagtag ggagaaccgc tcgccggacg
    30841 cggatcaaca tcactgtaga tcacatgcgc aggcataatg gcgtcgagtt tattttcgcg
    30901 gattaaggaa ctgaagaccg acatatcttt agcgcgaatc tccgcttgtg gacgtggatc
    30961 gcacggtgtt tctttgtgtg agtctgccgt tactgcaccg tgtcctggga agtgtttccc
    31021 ggtcgttttc attccggctt catgcatacc atcaataaac cggctggcaa ttgccagggc
    31081 tttttgtgga tcggcatgat aagaacgctc gccaatcgcc gcgctgatat gcccgacatc
    31141 cagcactggc gcaaagctga tatcaatatc catagcgatc atttcgctgg ccatcagcca
    31201 acccgcctct tgcgccagtt tgccgccctc ttccattcct gacagcgcag cgaatgattg
    31261 cgccgctggc aagcgggtaa aaccttcacg aaaacgctgc acgcgtccac cttcctgatc
    31321 taccgccacc accagatgat tgcgcgaagc tgcgcggatc tggcgcacca gttcacgcaa
    31381 ctgggcagga tcatgatagt tacgcgtaaa gagaatcagc cctcccacca gcggatgcgc
    31441 aagtatttca cgctcttccg cgtccagttc gtaaccttcg acatccaaca ttactggacc
    31501 cacactgctc tccttattgt tttattaata gctgccgcca ggtgtcatcg gccagcctga
    31561 taaattgttg atcgccggtt tgtcgccagc ggtactcaaa ccaccctgct ttgagcatca
    31621 gcagccaggg aaaccatcgc ctgacctgac gccataattg cgccggataa atcttcgcgc
    31681 gagtggcata gtcattgacc aattgccggt gctgttcagt attttccacc cacactgccg
    31741 ccagttccag cgcgatatca ccatctccgg catactccca gtcgatgagt tttaaccctg
    31801 acgcgctatg cactaaattt ccggcgtgga catccatatg caatggactt aagcgtaaag
    31861 gccgtggttc ccgcgctttg cgcagacgtt ttaacattcg cagccaaccc actgtccgcc
    31921 gcgccggatc gctttgctgc cagtacagtt ccagtaacgg caacagcgtt attcgccagc
    31981 caaaacgtgg ttgttgatgt agataataca gcaagcctgc cagttcgttg gtatccggca
    32041 aatacgtttt tacctcgccg ggcagatagt cgactaccat ccagtcacga agatataaat
    32101 gcggcttcgg tgcaatgcat gtgggtagtt gtgataaagc ccgatactgg cgcaagaacg
    32161 cggactgcgg cgcatcagga tcgtgcggct gacgcacaac aaaacgctgg ccctgatgtt
    32221 caatgagaaa actcccgcca ctaagcccac tattaaacgt cgtgacggga tgaaactgcg
    32281 ggaaaaagcg cgacagcaat tcgtcgcgcg tgatgggatt attgctgcga aacggcacct
    32341 ttacctgacc agataatttc gcccgtctgc accagcatca gctgcatttg tagggtcgga
    32401 gcgttaacgt tgccagaggc gctggagtac agcacgtaat gagcgccgac attgcgggca
    32461 atgcctatgg ctttactacg ggtgcctaaa ctgtcctgcg gcgacaaacc taactgttgc
    32521 ttagccatcg acagctgctg ggcggaaacc agggtaaatt tcccgttatt agccagcgca
    32581 tttcgcagcg tttcggtcgc ttctgcggca ttcagcgaac cgttagtacg gttgttaacg
    32641 ctatcaacca gcaggacgct acccgcagtc accccgtcag ccccaagcat cttactgacc
    32701 atcggctgca ttgcgccatt ccagtcataa tggcgaatat gcggcgcagg cggtgcagtt
    32761 tgatcttcgt gctcaattgg gcctggctgc tgcgggatcg tcggcaccga gggcactgtg
    32821 gggacaggct gttgtggctc ggctggttgt tccggcgctg gtttcacttc ttctaccggt
    32881 gcaggttcac gttgccccac acacccggcg agaaacatcg ccagcgcggt aatcaaggcg
    32941 tagcgactca tttttgtcat caagattcac cccttacaaa tatagataaa gtctgacttt
    33001 gtgcgccccc agaaaattgg cgctgccgta cagcgttacc gccgaatgtg cgggaatggt
    33061 aacgctgcgt ggcctttcca gaggatgcat ctccagccct ctggcgtcat accagtaaaa
    33121 acgataatga acggtaacgg gttcttgcct ttcgttataa agcgttgagg atgctgaagg
    33181 ttgaatatca gacgtcgaaa ggacgggctt ttctgcactg atgcccgcag ccaataaaga
    33241 tgactccatc accagcgatt gctcatcatt caccggaatt tccggatgtg aacgacagcc
    33301 caccagcagt aacaacacca gagacaccag cccaaagcat ccttttctca tcgttacaga
    33361 cctttatgcg ccagcattgg tcccagcgga cggccaccca acaagtgcat atggatgtgg
    33421 taaacctctt gtccgccatg gcggttggta ttcatgatca gacgatagcc atcttcggca
    33481 ataccttctt gctcagcaat ttttgccgct acggtgatca tgcgtcccag cgcctgctca
    33541 tgctcagctg acacgtcgtt cacagtcgga atgaggatat tcggaatgat cagaatatgc
    33601 gttggcgctt gcggcgaaat atcgcgaaac gccgttacca gatcatcctg gtagacgata
    33661 tcggagggga tctcacgacg aataattttg ctgaatatag tttcttctgc cacgacattt
    33721 tcctttttca aatagccatg cgttgcgcca tgctacgccg cgccacactg cgagtataga
    33781 gtatggtcga gttaaacctg ctctttcaac cttaactcac gatttcttaa gcaaaaaatc
    33841 gttttgctgc cgtatatatc gccattattc ccatttctgc ctgcgaatgc gctgaaaaga
    33901 cattctctgt ttggtttaca cgacaaatat gaatgcgtat atttctcatt tgcatttaca
    33961 aacaaaatta ttcgcacact aaatataacc gctcatcacc ctcctccggc atgagcctga
    34021 cgacaacata aaccaagaga tttcaaatgc tttcaacaca atttaacagg gataatcaat
    34081 atcaagccat caccaaaccg tcactacttg ccggttgcat agcactggca ctattacctt
    34141 ctgccgcttt tgctgcacca gccactgaag aaacggtgat tgttgagggt tcagccacag
    34201 ctccagatga tggcgaaaat gattacagcg taacgtctac ctctgcgggt accaaaatgc
    34261 agatgactca acgtgatatt cctcagtcgg tcactattgt tagccagcag cggatggaag
    34321 atcagcagtt acaaacgctg ggcgaagtga tggaaaacac gctggggatc agcaaaagtc
    34381 aggcggattc cgatcgtgct ctttattatt cccgcggatt ccagatcgat aactatatgg
    34441 ttgatggtat ccccacctat tttgaatcgc gctggaatct gggcgacgca ctttctgata
    34501 tggcactgtt tgaacgcgta gaagtagtgc gtggcgcgac aggactcatg accgggacgg
    34561 gtaatccatc tgcggcaatt aatatggttc gaaaacacgc gaccagtcgt gaatttaaag
    34621 gcgatgtctc gacggaatac ggtagctgga acaaagaacg gtatgtggcg gatttacaaa
    34681 gcccactcac cgaagacggt aaaatccgcg cgcgaattgt cggcggctac cagaataacg
    34741 actcatggct ggaccgctac aacagtgaaa agaccttctt ctccggcatt gtcgatgctg
    34801 atttaggcga tcttacgacg ctttcagccg gttacgaata tcagcgcatt gatgttaata
    34861 gcccaacctg gggcggttta ccgcgctgga atactgatgg cagcagcaac agttacgatc
    34921 gcgcacgcag taccgcacct gactgggcgt acaacgataa agagatcaac aaggtcttta
    34981 tgaccctgaa gcagcggttt gctgatacct ggcaagcgac actgaatgcc acccactctg
    35041 aagtcgaatt tgacagcaaa atgatgtatg tcgatgccta tgtaaacaaa gcggatggta
    35101 tgctggttgg gccatacagt aattatggac ctggctttga ttatgtcggc ggcaccggtt
    35161 ggaacagtgg caaacgtaaa gttgatgcgc tggatttgtt cgctgacggt agttatgaat
    35221 tgtttggtcg tcagcacaat ctaatgtttg gtggcagtta cagcaaacaa aacaatcgtt
    35281 acttcagttc atgggccaac atcttcccgg atgaaattgg cagtttctac aactttaatg
    35341 gcaatttccc acaaaccgac tggtcaccac agagcctggc gcaggacgat accacacata
    35401 tgaaatcgtt atatgctgcc actcgtgtca cccttgccga tccgctgcat ctgatcctcg
    35461 gcgcacgtta taccaactgg cgggttgata cgctgactta cagcatggag aaaaaccaca
    35521 ccacgcctta cgctggtctg gtgtttgaca tcaatgacaa ctggtcgacc tacgccagct
    35581 atacctctat tttccagccg caaaatgatc gtgacagttc aggcaaatat ctgactccaa
    35641 tcaccggtaa caactacgag ctgggtctga aatcggactg gatgaatagc cgtctgacca
    35701 ccacgttagc catcttccgt attgagcagg ataatgtcgc tcagtccacc ggtacaccta
    35761 tccccggcag caacggcgaa accgcctata aagcggtgga tgggacagtc agtaaagggg
    35821 tggaatttga actcaacggc gcaattaccg acaactggca gctgacattt ggcgcaacgc
    35881 gctatattgc agaggataac gaaggaaacg ccgttaatcc taatctgcca cgcaccacgg
    35941 ttaaaatgtt caccagctat cggttgcctg tcatgccaga gttgacagtc ggcggtggtg
    36001 ttaactggca aaatcgcgtg tataccgaca ccgtgacacc gtatggcacc ttccgcgccg
    36061 agcaaggtag ctacgcgctg gtggatctct tcacccgcta ccaggtgacg aaaaacttct
    36121 cgttacaggg gaacgtcaat aacctgttcg acaaaaccta cgataccaac gtggaaggtt
    36181 ctatcgtcta cggcacaccg cgtaatttca gcattaccgg cacgtatcaa ttctgaataa
    36241 cacctgtaaa aaaggcagcc atctggctgc cttagtctcc ccaacgtctt acggattagt
    36301 ggttacggat gtactcatcc atctcggttt tcaggttatc ggatttagta ccgaaaatcg
    36361 cctgaacacc agaaccagca accactacgc ccgctgcgcc cagtttcttc aggccggcct
    36421 gatccacttt agacacatca gcaacgctga cgcgcagacg ggtaatacat gcgtcgaggt
    36481 tagtaatgtt ttctttacca ccaaatgcag caaccagagc cggtgccatt tcgctggtac
    36541 ctgtcgcttt tgcatcttca gtcgcgtctt cacgacccgg cgttttcaga tccagtgctt
    36601 taatcagcac gcggaagatg gtgtagtaaa caatcgcata accgataccg acgatcggga
    36661 acagccacag tttgctgctg ttaccagaca gaacgatgaa gtcgatcaga ccgtgcgaga
    36721 acgacgtacc gtcacacatc cccagaagaa tacagattgg gaatgccaga cctgccagaa
    36781 tcgcgtggat gatgtacagg atcggcgcaa cgaacatgaa ggagaactcg atcggctcgg
    36841 tgataccggt caggaacgag gtcagcgccg cggagatcat aataccgccc actttcgcgc
    36901 ggttttctgg tttagcagag tgccagatag caattgcggc agctggcaga ccgtacattt
    36961 tgaacaggaa gccaccagac agtttacccg cagtcgggtc acccgccata taacgcggaa
    37021 tgtcgccgtg gaaaacctga cctgctgcgt tggtgtattc accaatctgc atctggaaag
    37081 gtacgttcca gatgtggtgc agaccaaacg gtaccaggca acgttcgatg aaaccgtaaa
    37141 tgccaaacgc aactaccggg ttctggtaag cagcccactg agagaaggtc cggattgcag
    37201 aaccaatcgg cggccaaatg aaggacagca caacgccagt aaagatggca gccaggccag
    37261 aaatgatcgg cacaaagcgt ttaccggcaa agaagccaag atactcaggc agcttaatac
    37321 ggtagaaacg gttaaacatg tacgctgcga tcgcaccgga gataatccct ccgagtacgc
    37381 cagtatccgc caggtgttta gaggcgattt cttcagcagg taaatgcagt accagtggcg
    37441 caaccacggc catggtttta accatgattc cataggcaac aactgcggcc agcgcggata
    37501 cgccatcgtt attggtaaag ccgagggcga caccgatcgc aaaaatcagt ggcatgtttg
    37561 caaagacgga accgcctgct tctgccataa catgcgatac aacggcgggc agccagctga
    37621 aattcgcgga accgacgccc agcagaatac ctgcgatagg cagtacggat accggcagca
    37681 tcagcgattt accgaccttt tgcaggttag caaatgcatt cttaaacata attgagagtg
    37741 ctcctgagta tgggtgcttt ttttacgttc tcacgcgtgg caagggggga gagcctcgcc
    37801 gtgtacaggg catctaagcg ccctttattt attacacaga gtaaaataat tcagtgccaa
    37861 tttgtttgac ggctatcacg tttcaacttc agatcattgg agaagttgca cattttgaca
    37921 aaacatatgt cacaatattt caaacgtggt tattcaccgc ccaattttcg gcggtgaact
    37981 ttactcgttt tagccattaa ttacgagctt taaaaaaact cattcaacgg atagattgaa
    38041 ggcgggaagc gtcgatgtga aacagacggg cgaagttatc ggtggttacc tgcgccagtt
    38101 cttcaacggc aacacctttc aacacagcca tgtattctgc aacgtcacga accatcgcag
    38161 gttgattctc ttttcctcga tgcggtaccg gcgcaaggta aggtgagtca gtttccacca
    38221 gtaaccgatc cagggggaca taacgcgcag catcgcgcag ttgctccgca ttacggaagg
    38281 tcacaatgcc agaaaaggag atgtaaaatc cgagatccag taatttgccc gccgtttctc
    38341 tgtcctctgt aaaacagtgt agtacgccac cgcaatccgt cactttttct tcgcgcagaa
    38401 ttgccagcgt atcggcgcgg gcgtcacggg tatggacgat aaccggcttg ttcagttcac
    38461 gaccaatctg gatatgatgg atgaaggact cttgctgacg aactttagtt tccggtgtgt
    38521 aataataatc cagcccggtt tcacccagcg ctacaacacc ctcttctgcc gccagacggc
    38581 gtaaatcttc tacatcgtag ggatcattct ggttgagtgg atgcacgcca caagaaaata
    38641 cgacgttgtc acgttcgcct accagatccc gcatatgtaa ataacccggt aatgttgtgg
    38701 cgactgccag acaaaatttc acatcgcgtg cggcggcttt cgccagaacg tcatccacgt
    38761 ccttatgcaa agattcataa tccagaccat cgagatggca gtgtgagtcg actaaaaaca
    38821 tgatgtctct cttaaagatg aggaaccggt agcacaacgc ccggttgcag gtaatgctca
    38881 atacgcagta aaagatcggt gatgagaagc tcgcggttga tgcctgtgac agacattaac
    38941 tgttcacgaa tgtggcaaac atcccccagt atagcctgca ggcgcgaggg agaaagatgg
    39001 tttgccagtt cggcgaccag gcccggcaca tcaacattgg tcacctgcgc agcgccatga
    39061 tggcgtttta gcgcatccat cagcaacgtt gccagccagt gtaaacgcgc cggagcttgt
    39121 tcatgattaa gggccgccag cagcgaatac cagtcgcccg atggcacgct atatgccaac
    39181 gcctgacaca atgtttcacg agcctgccag ttatctccct gaaacaacgc cagtgccgcg
    39241 ccaggcgaac cggcgcttaa gcgcaatgcg gcaagtaatg catcctgtga cattgtcact
    39301 tcgcgtgaaa gccaggtcac ggcgtactgt tccggaggcg gcgcaaggta atgtaaccga
    39361 caacgactac gtaatgttgc cagtaaacgt tcaggctcgc gggtagccag gaaaaaccag
    39421 gtttctgctg gtggctcttc aagcgttttc agcaatgcgt tagccgcggc gtcggtcagt
    39481 aaggcagcat cggttaccca gacaactttc gcaccaccta ggcgtgcgtg ctcattcagc
    39541 ttttcggtga cctcacgtac cgcatcaatg cccagcgtat ttttcccttt ttcgggagcc
    39601 agggtgtagt aatcgggatg cgtgccagcc tgcatcaact gacatccacg acagtgaccg
    39661 caacttttgt ggccctgcgg ttgttggcag agtaaataac ggctcagggc gtagattaaa
    39721 gcatcatcgc ccatgcccgg taacgcctga atgagtagcg catggtgacc tcttccggcc
    39781 tgatagctgg ctaccagttt ttcgaaatca ggtcgtaacc atggatacca tctcatgcgt
    39841 ccaactcctt cacccagtgg gtcacggtag tgcggattgc atccatcacg gcctccagcg
    39901 gctgggtggc atcaatggta tgaatacttt tatcttgtgc agccagttcc agatagcggg
    39961 cgcgggtgcg attaaagaaa tcgaaagact cttgctcaat acgatccagc tcgccgcgcg
    40021 cacgcgcgcg ttttaagcca acttccgggg taacatcgag atagagcgtt aagtcggggc
    40081 gaaaatcccc gagaacagca tcacgcagtg ttgccagcat atgttggtca ataccacgtc
    40141 ctccgccctg atacgcctga gtggagagat cgtggcgatc gccaatcacc caggtgccgt
    40201 tagccagcgc aggtttgatg accgtttcta ccagttgaac gcgcgcggca taaaacatca
    40261 gaacttcggc tttatcggta atgacttcat cgcctaccga tttgatatcc agcaccaggc
    40321 ttcttaactt ttcggcaagt tgcgtaccgc caggttcccg agtgaaaacc atgtcgcgga
    40381 tacccagttg ctcgagcgtc tcaaccacca cattacgcgc ggtagttttg cctgcgcctt
    40441 ccagcccctc aatgacgata tacttactgc gcattttttt ccttaagcac tttcagataa
    40501 tcctgcacag acttgttatg actggcaaga ttggtattaa acgtgtgacc acctttacca
    40561 tcggccacaa aatagagata cggcgttttt gccggatgcg cagcagcctt cagcgaatcc
    40621 gcccccggcg tagctatcgc acccggcggc aaaccggtaa tggtataggt gttatacgct
    40681 gtcggcgttt ccaggtctgc acgagaaagt ttgccattat aacgctctcc catcccgtaa
    40741 atcacggttg ggtcggtctg caggcgcata ccaatgcgta aacggttgat aaataccgag
    40801 gcaacctgat cgcgttcact ggcaacggcg gtttcttttt cgataattga tgccatcgtc
    40861 accagctgat ttttatcttt ataaggcaga ccgtccgcat gcccttccca ggcgctatcg
    40921 accgctttca ccattttctt gtgcgctcgc ttgagtaacg cgacatcggt ggtattggcg
    40981 gtatacatcc aggtgtctgg ccagaaccaa ccttcaatcc actccgggtt ttccagttca
    41041 agtgcctgcg ctacggtggc gtacttatcg tcactcagcg agtgcttgat atacggagcc
    41101 tcacgcaatt gcttgaggta gtcgctcaga cgcatccctt ctaccagtcg cagcgggaac
    41161 tgtgcttctt taccgctttc caacaatttc agcatctcgc gcacggtcat ctgcggtgta
    41221 aagcggtaag tcccggcttt aaagtgagaa agatccggtt cgatacgcag cagccattga
    41281 aaaacccgtg ggcgattgat gatcttatca gcataaagct gttcaccgag cgccagacgt
    41341 ccggtccctg gcttcagggt aaatatcgtc tcttctttga taagcaattt gctgtcggca
    41401 agatggcgaa ccttccagac gcccacacca gcggcgatac ccagtaccac cagcaataac
    41461 aagataatca ataacacttt tttcatgact aattcgggcg ctcacaaagt ggggctaaat
    41521 attcatataa cgttgctgac gaaaaggtga catcgccaca ggcacgtacg ggcatcactg
    41581 gcattaacgc attacaaata accatctcat ctgcctgcaa cgcctcctcc agcgaggctt
    41641 gcacttcgac aagctgataa gaggattgtg ccagtaaacg gatacagaat tgtcgcataa
    41701 tgccgttaac acctgcctga tccagtcgcg gcgtataaac tacgttgccc ttccgccaga
    41761 acaaattagc cgcacagcat tccgtaaccc acccttcgct gtcaaggacc agcgcctcat
    41821 cagcgtttgt ctgctcaaga tgagagcgaa tcaatacttg ctcaagccga ttaagatgtt
    41881 taatacctgc aagatgagga ttgcgcccca gccgcaccgg gcttagcgcc aacgtcatcc
    41941 cctcgttacg caaacggtcg taatgtgcag gataagccgt aacggagaga atccgcgttg
    42001 ctggtccgct gttcaatgtg ctgtaccctc gcccgccact accgcgactg atcacgactt
    42061 tcagtacacc attttgctgt tctgctgcca gcgttttcat ctcttgttca agctgaggcc
    42121 agaagtcaca ggaaatcatc aaccgctgac aagcatcctg tagtcgctgg atatgcgccg
    42181 ataacaaact gactttaccg tcgataactc tgacggtggt aaaacaacca tcaccaaact
    42241 gcgttgcccg atcgcttact gccagcgatt cctgcttata accgttaatt aagaacatac
    42301 cggctcctta tcagagaatt gttagtgtgg cagcatgttc actacggaac aagtcggaat
    42361 aaaagctaag aaaaaaggcc cgcaagcggg ccttttatat gggtggaaaa tgacaactta
    42421 gatcttttta aagatcaaag aaccattagt gccaccgaag ccgaaggagt tacacagcgt
    42481 gtattccatt ccgctgacct gacgtgcttc atgcggtacg aaatccagat cgcaaccttc
    42541 atccgggtta tccaggttga tggttggcgg aacagcctga tcgcgcagcg ccaggatgga
    42601 gtagatagat tctactgcac ccgccgcacc taacaggtga ccggtcatag atttcgtgga
    42661 gcttaccaac acacggcttg cagcttcacc gaagatggtt ttcaccgcct gcgcttcagc
    42721 tttatcgcca gccggcgtag aagtaccgtg cgcgttaacg tagccaatct gactcgcttc
    42781 aatgcctgca tcacgcagag catttgccat tgccagagct gcgcctgcgc cattttctgg
    42841 cggtgacgtc atatgataag catcgctgct cataccaaag ccgacgagtt cagcgtaaat
    42901 tttcgcaccg cgttttttcg cgtgttcgta ctcttcaagt accagcatac ccgcaccatc
    42961 gcccagtacg aagccatcac gctctttatc ccacgggcgg ctcgccgctt gcgggttatc
    43021 attgcgggta gataatgcac gtgccgcgcc aaaaccacca acacccagcg gcgtactggc
    43081 tttctctgcg ccacctgcaa ccatcacgtc agcatcgcca tacgcgataa tacgcgcagc
    43141 atggccaatg ttgtgcacgc cggaagtaca ggcggtcgcg atagagatgc ttgggccacg
    43201 caggccatac atgatagtca gatgacctgc caccatgttc acaatcgttg acggaacgaa
    43261 gaatgggctg atcttacgtg gaccaccgtt catcagagat gtgtggtttt cttcgatcag
    43321 tccgaggccg ccaatcccgg agccaattgc ggcaccaatg cgggttgcgt tctcttccgt
    43381 tatttcaagg ccagaatcct gcatggcctg aacgccagcg acaattccat attgaatgaa
    43441 ggcatccatc ttgcgctgtt ctttgcgcga gataatgtcc tcacagttaa aatcctttac
    43501 taagccagca aatttcgttg cataggcgct agtatcgaaa tggtcgatta ggctgatgcc
    43561 actctgaccg gcaagcagag ctttccaggt agactctacg gtattgccga caggagacaa
    43621 catgcccagt ccggtcacaa ctacacgacg cttagacacg tttgtcctcc agggagggaa
    43681 aaaatgattc tagtgggaca aaaagataaa actcaggcgg tcgaacgacc gcctggagat
    43741 gttcacttac gcctggtggc cgttgatgta atcaatggca gcctgaacgg tggtgatttt
    43801 ctcagcttct tcgtccggaa tctcagtatc aaactcttct tccagagcca ttaccagctc
    43861 aacggtgtca agagaatccg cgcccaggtc ttcaacgaaa gaagcattgt tggtaacttc
    43921 ttcctgctta acgcccagct gttcgccgat aattttctta acgcgttctt cgatagtgct
    43981 catactctta aatttcctat caaaactcgc tttcgcgatg gttttcgtag tgtataaaat
    44041 gttgaaaaat ttgcaactaa atcccggcag gtcttaccac gattttacgt tattttgagg
    44101 ccttaccccc caataacgca aatcattttg cactaattat tactcataac cacgcagact
    44161 gcgcgcaaca tgagcatttt gtgcaaatcg cggtcagacc atgtacatcc cgccgttcac
    44221 atgcaaagtt tcacccgtga tgtaagctgc ttcgtcggat gccaggaatg caaccgcgtt
    44281 ggcgatttcc tgtgcgccgc cgaggcgacc cgcaggaacc tgcgccagga tacccgcacg
    44341 ctggtcatcg ctcagcgcac gtgtcatgtc cgtttcaata aagcccggag caacaacgtt
    44401 tacagtaata ccgcgtgacg caacttcgcg cgccagtgat ttactgaagc cgattaagcc
    44461 cgctttcgcc gcagcgtagt tggcctgacc gccatttccc atggtaccaa ccacagaacc
    44521 gatagtgata atacgaccat gacgcttttt catcatagcg cgcattaccg cttttgacag
    44581 acggaaaaca gatgaaaggt tggtttcgat aatatcgttc cactcttcat ctttcattcg
    44641 cattaacagg ttatcacgag tgataccggc attattgacc aggatatcca cttcaccaaa
    44701 ttctgcgcga attttttcca gaacagattc gatagatgcc gggtcggtca cattcaacat
    44761 cagacctttg ccgttggcac ctaaataatc gctgatcgcc tgagcgccat tttcactggt
    44821 cgcagtgcca ataactttcg cgccacgggc tgcgagcgtt tcagcaattg cgcggccaat
    44881 tccgcggctt gcaccggtta ccagtgcgat ttttccttca aaattcatga ttttcctctt
    44941 ttaaagctcg agcgccgctg ccatcgctga aggttcgttc agcgccgagg cggtcagggt
    45001 gtcgacaatg cgtttcgtca ggccagtaag caccttgccc gggccgactt catagagatg
    45061 ttctacgcct tgcgctgcca tgtactcaac agacttcgtc cactgaaccg ggttatacaa
    45121 ctgacgtacc agtgcgtcac ggatggcatc accattggtt tcgcatttca catcaacgtt
    45181 attcacaaca gaaactgttg gtgcgttaaa ggtgattttc gctaattcta ctgccagttt
    45241 gtcggctgct ggtttcatca gcgcacagtg agacggtacg ctcactggta acggcagcgc
    45301 gcgttttgcg ccagcagctt tacaggcagc gccagcacgc tcaaccgctt ctttatgacc
    45361 ggcaataacc acctgtcccg gagagttaaa gtttaccgga aaaacgacct gaccttctgc
    45421 agcttcttca cacgctttcg caatagacgc atcatccaga ccgatgattg ccgccatagc
    45481 gcccgtgcct tccggtacgg cttcttgcat gaacttaccg cgcatctcaa ccagacgcac
    45541 cgcatcagcg aaatcaatca cgccagcgca aaccagcgcg gagtattccc ccaggctgtg
    45601 accggccatc attgccggtg ctttaccgcc ctgctgctgc catacgcgat acagcgcaac
    45661 agatgcagtc aacagcgctg gctgggtttg ccaggtttta ttcagttctt cagctggccc
    45721 ctgctgggtc agcgcccaca ggtcgtagcc cagcgccgca gaagcttcag caaacgtttc
    45781 ttcgacaatt ggatagctcg ccgccatatc agccagcatt ccaacggttt gagaaccctg
    45841 tccagggaac acaaatgcaa attgcgtcat gttttaatcc ttatcctaga aacgaaccag
    45901 cgcggagccc caggtgaatc caccgccaaa ggcttcaagc agaaccaact gccccggctt
    45961 aatgcgcccg tcgcgtacag cttcatccag cgcgcacggg acagaggccg cagaggtatt
    46021 accgtggcga tccagcgtca ccacgacatt gtccatcgac ataccgagtt ttttcgccgt
    46081 tgcactgata atacgcaggt tagcctgatg cggaaccagc cagtcaagtt gagaacggtc
    46141 aagattattc gccgccagcg tctcatcaac gatgtgcgcc agttccgtta ccgcaacctt
    46201 gaagacttcg ttgcccgcca tcgtcagatg aattgaattc tctggattca cgcggtcggc
    46261 gtttggcagc gtcagcaatt caccataact accgtcggca tgcagatggg tggaaatgat
    46321 tcccggctct tcagaggcag ccagcaccgc agcgcccgcg ccatcgccaa aaataataat
    46381 agtcccacga tctgttggat cgcaggtgcg cgccagtaca tcggaaccga cgaccagagc
    46441 atacttcacc gccccagatt tcacgtattg atcggctacg cttaatgcat aggtgaaacc
    46501 tgcgcaggct gctgcaacgt caaatgccgg gcaaccttta atgcccaaca tgctttgaat
    46561 ctgacaagct gcgctcggga aagcgtgcgt agcagaagtc gttgccacaa cgatcaggcc
    46621 aatctggtct ttctcaatgc ccgccatctc aattgcgcgt gtcgccgctt caaagcccat
    46681 ggttgaaacg gtttcgtttg gcgcggcaat gtggcgttcg cggataccgg tacgagtgac
    46741 aatccactcg tcagaggtgt ccaccatttt ttccaaatcg gcgtttgtcc gcacttgttc
    46801 gggcagatag ctgccagtac caataatctt cgtatacatg tacgctcagt cacttttcgg
    46861 ttatataccg tcacttgcaa actgcgagtt cgctggcagc gtcctgctac cgcagagttc
    46921 cgcttttgcc accgtccagc agctcaaaac cagctgggta tacagattcc aggcgagcgg
    46981 caattcgctg aggaacttgt cgctgcaccg cctgcactgc ctgttcaatc gcgaccgcaa
    47041 aagctcgctg attggctgca ccatgacttt ttatcaccgt gccgcgcaat cctaacagac
    47101 aggcgccgtt atactggtcg gggttgaggt gactgaatcg cctcgtcagg ctcttttgta
    47161 gccaacgctt taataacagt agccaccacg accgtttttt cccttcactc tgagatttca
    47221 gcagagaaag gaacatcctg acaacacctt ccatcgtctt taatgtgaca tttcctgtaa
    47281 agccgtcaca aaccagcaca tctgtcttgc cagttaacaa ctcattggct tcaagatagc
    47341 cgatataatt gatagaaggg attgttttaa gcaccgctga ggcatcccga atactatcga
    47401 gaccctttac ttcttcttca ccaatattga gcaacgccac gcgaggattg ggaatttcca
    47461 ccacttcttc agccaggact gagcccataa tggcaaattg caccaacatt gtgctgtcac
    47521 aatcgacgtt ggcccctaag tcaaggacca ccgttttgcc cttttgctga tgtggtaata
    47581 ccgtcaccag cgccggacgc tcaatcccct ccaggggctt gagtaataat tttgccagcc
    47641 ccatcagtgc cccggtatta ccggcactga cacaggcttg cgctcgacct tctttcacca
    47701 gctccagggc cacgcgcatt gaactcccac gactggcgcg gatagcttgc gaaggccgga
    47761 catcactggc gataactgac tgcgcaggaa taatctgcag acgcgaacgt tgttcaaagt
    47821 cagctttagc aagtaatggc gtgatggcgt cgggattgcc gactaaaaga agagtgagtt
    47881 gcgaattaga attcagtgcc tgcaatgctg caggcactgt cacggaaggg ccaaaatccc
    47941 ctcccatgac atctaacgcc agggttagac gtgtcaaggt atcgtcgccg cccggtttgg
    48001 tctttcccca gttgcctggg gaaaatcctc actaagcttc atcacgcaga cgcgtgatta
    48061 cttagcgatg accttgcggc cgcggtagta accgtcggca gtgatgtggt gacgcaggtg
    48121 tttttcacca gaagttttgt ctacagacag gctggtgact gcggtcagcg cgtcatggga
    48181 acgacgcatg ccacgtttgg aacgggttgg tttattctgt tgtacggcca tggaccttac
    48241 tcctcaatta cggtttatcc ccgacccaac ggggagcacc aattacttac gctttaagct
    48301 ggctaatacg gcaaatgggt ttggcttttg cgcttcttca ggcagttcac caaagaccat
    48361 gtccgcttcg gacacttcac agtgttcaga atcatgcacc ggaactaccg gcaaggcgag
    48421 gatgatttca tcttcaacca ttgcaagcag atcgatttca ccgaattcgt taaccttaat
    48481 cggttcatac gcttccggca gtgcttcagc ctgttcgtct gaacgcacag gactaaaaca
    48541 atacgttgtg tagacctgat gagtaaacgg cttcccgcaa cgctgacact cgagcgttac
    48601 cgtcaccttc gcatcgccgt ttaacactgc gagacgttgg ttatcgatag cgaacgacat
    48661 ggagcattcc acatcactgt ccacactgac tacggattcg gcgacgcgct caacctgatc
    48721 aggggtatag ataccctggt aatcaaggcg tttttgagcc gtacgaaccg gatcgagagt
    48781 caggggtaat tttacctttt gcatagggcg cgcatattaa ctttgtaacg tcatagagtc
    48841 aaagaaaaag gcagcctgtg gttgcctttt gccaataatt cgcacacatt gcgggttact
    48901 gctttatttt cgttcagtgc tgataacgaa catcaacctg caaaacgaag cgcatagttt
    48961 aaaatggcta tcatcaatac gctatatctg atggaaaaaa atatgcctaa acttatttag
    49021 gcctccacct cgccatggcg tcgcgctctt ctggaaaaac tgcaaatctc ttttgaatgt
    49081 gcagcaccag aggtcgacga aaccccacgc agcgacgaat caccgcgaca gttggtgctt
    49141 cgactggcac aagaaaaagc gcaatctctg gcgtcacgtt atccggatca tttaattatt
    49201 ggttcagacc aggtatgtgt tcttgatggc gaaatcaccg gtaaaccgtt aacggaagaa
    49261 aatgcccgtc tgcaattacg caaagccagc ggcaatatcg tcaccttcta tactggactg
    49321 gcgttgttta attcgtcgaa tgggcatcta caaacagaag tggagccttt tgacgtccat
    49381 ttccgtcacc tgagcgaggc ggagattgat aattacgtgc gtaaagagca tcccctgcac
    49441 tctgaggaat ccccagaaaa c
//
LOCUS       DAJVTL010000013        49382 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.013, whole genome shotgun sequence.
ACCESSION   DAJVTL010000013 DAJVTL010000000
VERSION     DAJVTL010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 49382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49382
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.013"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..102)
                     /locus_tag="OQQ26_000737"
     CDS             complement(<1..102)
                     /locus_tag="OQQ26_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HCS1856306.1"
                     /translation="MKISRLGEAPDYRFSLANERTFLAWIRTALGFLA"
     gene            197..646
                     /locus_tag="OQQ26_000738"
     CDS             197..646
                     /locus_tag="OQQ26_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856307.1"
                     /translation="MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPQPTLESIV
                     ADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILDQSGIALAIAALLCAFIGDMRKE
                     NRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV"
     gene            complement(693..2127)
                     /locus_tag="OQQ26_000739"
                     /pseudo
     CDS             complement(693..2127)
                     /locus_tag="OQQ26_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418134.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
     gene            complement(2124..3767)
                     /locus_tag="OQQ26_000740"
     CDS             complement(2124..3767)
                     /locus_tag="OQQ26_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="solute:sodium symporter family transporter"
                     /protein_id="HCS1856308.1"
                     /translation="MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKA
                     PVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGI
                     ATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
                     AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFM
                     QGIEQITTIHAEKLNSVGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLA
                     EGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPLVGFFG
                     AVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLV
                     APWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITI
                     NYLVKFDFHFLYVLACTFCINVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRW
                     LAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDAKDSL"
     gene            3932..4825
                     /locus_tag="OQQ26_000741"
                     /pseudo
     CDS             3932..4825
                     /locus_tag="OQQ26_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418136.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(4822..6144)
                     /locus_tag="OQQ26_000742"
     CDS             complement(4822..6144)
                     /locus_tag="OQQ26_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-alpha-glucosidase"
                     /protein_id="HCS1856309.1"
                     /translation="MTKFSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGAR
                     QEVIAEACKVILKEKAPDIAFSYTTDPEVAFSDVDFVMAHIRVGKYPMRELDEKIPLR
                     HGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLR
                     PNAKILNICDMPIGIESRMAQIVGLQDRKQMRVRYYGLNHFGWWTSIEDLQGNDLMPQ
                     LRQYVSKHGYVPPQQDTHTEASWNDTYAKARDVQALDPDTLPNTYLKYYLFPDYVVQH
                     SNPEHTRANEVMEHREKQVFDACRAITAAGNSAAGKLEIDEHASYIVDLAAAIAFNTQ
                     ERMLLIVPNNGAIHNFDDEAMVEIPCLVGHNGPEPLVVGDIPQFQKGLMSQQVAVEKL
                     VVDAWEQRSYQHLWQAITLSKTVPSASVAKAILDELLEANKAYWPELR"
     gene            complement(6144..7685)
                     /locus_tag="OQQ26_000743"
     CDS             complement(6144..7685)
                     /locus_tag="OQQ26_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCS1856310.1"
                     /translation="MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTD
                     PNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFI
                     NAMGMTWGSYFGVDFTQDAVAGSGLTIMAGIKTLDTSIIGAIIISGIVTALHNRLFDK
                     KLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWV
                     YTFLERILIPTGLHHFIYGPFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGG
                     FALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLAASMSTVMYLFGVV
                     GNMGGGLIDQVLPQNWIPMFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPG
                     REDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGGGNISSINNCATRLRI
                     ALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVA
                     ITEAV"
     gene            7981..8697
                     /locus_tag="OQQ26_000744"
     CDS             7981..8697
                     /locus_tag="OQQ26_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCS1856311.1"
                     /translation="MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRK
                     AIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMP
                     APPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSDMPVKLFRNLSLQHLEGSKFEY
                     IEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMF
                     RNASEYQVEYHLRRLHPEKS"
     gene            complement(8694..10355)
                     /locus_tag="OQQ26_000745"
     CDS             complement(8694..10355)
                     /locus_tag="OQQ26_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HCS1856312.1"
                     /translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
                     HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     IGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
                     AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIRTINIRVENPNLHD
                     LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
                     EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKKRYDVVISRLNRAGVELVASGD
                     ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
                     GFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKS
                     GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
                     ALAFANNLHPTSGAAALSYATVYPLVMFLRIITPQLLAVLFWSIG"
     gene            complement(10551..10979)
                     /gene="ibpB"
                     /locus_tag="OQQ26_000746"
     CDS             complement(10551..10979)
                     /gene="ibpB"
                     /locus_tag="OQQ26_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709512.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HCS1856313.1"
                     /translation="MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
                     MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
     gene            complement(11091..11504)
                     /gene="ibpA"
                     /locus_tag="OQQ26_000747"
     CDS             complement(11091..11504)
                     /gene="ibpA"
                     /locus_tag="OQQ26_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HCS1856314.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
     misc_feature    complement(11498..11570)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01832"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ROSE (Repression Of Heat Shock gene Expression)
                     occurs in the 5'-region of heat shock genes and acts as an
                     RNA thermometer to modulate expression; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF01832"
     gene            11810..12142
                     /locus_tag="OQQ26_000748"
     CDS             11810..12142
                     /locus_tag="OQQ26_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418143.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HCS1856315.1"
                     /translation="MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSRVEKSEANAQATNAVI
                     PPARMPDN"
     gene            complement(12144..13358)
                     /locus_tag="OQQ26_000749"
     CDS             complement(12144..13358)
                     /locus_tag="OQQ26_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HCS1856316.1"
                     /translation="MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIER
                     VNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDKTWHYDFHHRRGVIFE
                     GGKMSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNV
                     GVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAF
                     IGDTLSPKGEKVPELFIVELPQDEAGWKAAGEAPLSGTETTLPAPPRGVVQRRLTFTH
                     HRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQ
                     SAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWM
                     EGGQLWSTETDR"
     gene            13459..14523
                     /gene="cbrA"
                     /locus_tag="OQQ26_000750"
     CDS             13459..14523
                     /gene="cbrA"
                     /locus_tag="OQQ26_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin M resistance protein"
                     /protein_id="HCS1856317.1"
                     /translation="MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQHGTEGFSK
                     PCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHA
                     FDLWMKSLIPASVEVYHDSLCRKIWREDNKWHVIFRADDWEQHITARYLVGADGANSM
                     VRRHLYLDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAY
                     PMKDGQTRFTTLKEKMSAFQFQFGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAG
                     FISASSLEGISYALDSAEILRAVLLKQPEKSNAAYWRATRKLRLKLFGKIVKSRCLTA
                     PALRKWIMRSGVAHIPQLKD"
     gene            complement(14520..15858)
                     /locus_tag="OQQ26_000751"
                     /pseudo
     CDS             complement(14520..15858)
                     /locus_tag="OQQ26_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709507.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(15936..17765)
                     /gene="dgoD"
                     /locus_tag="OQQ26_000752"
                     /pseudo
     CDS             complement(15936..17765)
                     /gene="dgoD"
                     /locus_tag="OQQ26_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001701293.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="galactonate dehydratase"
     gene            complement(17749..18627)
                     /gene="dgoK"
                     /locus_tag="OQQ26_000753"
     CDS             complement(17749..18627)
                     /gene="dgoK"
                     /locus_tag="OQQ26_000753"
                     /EC_number="2.7.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HCS1856318.1"
                     /translation="MTARYIAIDWGSTNLRAWLYQGDHCLESRQSEAGVTRLNGKSPA
                     AVLAEVTTDWREENTPVVMAGMVGSNVGWKVAPYLSVPARFSSIGEQLTSVSDNIWII
                     PGLCVSHDDNHNVMRGEETQLIGARALAPSSLYVMPGTHCKWVQADSQQINDFRTVMT
                     GELHHLLLNHSLIGAGLPPQENSADAFAAGLERGLNAPAILPQLFEVRASHVLGTLPR
                     EQVSEFLSGLLIGAEVASMRDYVTHQHAITLVAGTSLTARYQQAFQAMGCDVAAVAGD
                     TAFQAGIRSIAHAVAN"
     gene            complement(18624..19313)
                     /gene="dgoR"
                     /locus_tag="OQQ26_000754"
     CDS             complement(18624..19313)
                     /gene="dgoR"
                     /locus_tag="OQQ26_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-galactonate utilization transcriptional
                     regulator DgoR"
                     /protein_id="HCS1856319.1"
                     /translation="MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNI
                     IREVFRSLMAKRLIEMKRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVR
                     NLVEPAIARWAAERATSSDLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNP
                     VLQQLSIAISSLQRAVFERTWMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMI
                     ASSTRRLKEIT"
     gene            19591..20247
                     /locus_tag="OQQ26_000755"
     CDS             19591..20247
                     /locus_tag="OQQ26_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856320.1"
                     /translation="MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQ
                     SDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDAR
                     FVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKN
                     MDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ
                     "
     gene            complement(20293..21105)
                     /gene="yidA"
                     /locus_tag="OQQ26_000756"
     CDS             complement(20293..21105)
                     /gene="yidA"
                     /locus_tag="OQQ26_000756"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HCS1856321.1"
                     /translation="MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTG
                     RPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSRE
                     VGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEP
                     AILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAI
                     GDQENDIAMIEYAGVGVAMDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN"
     gene            complement(21220..21618)
                     /locus_tag="OQQ26_000757"
     CDS             complement(21220..21618)
                     /locus_tag="OQQ26_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000522202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HCS1856322.1"
                     /translation="MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGL
                     GAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIID
                     ALSPQGEVSPQANNDLLSAGMELLKGKLFH"
     gene            complement(21858..24272)
                     /gene="gyrB"
                     /locus_tag="OQQ26_000758"
     CDS             complement(21858..24272)
                     /gene="gyrB"
                     /locus_tag="OQQ26_000758"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HCS1856323.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
                     EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
                     TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLGHEFI
                     TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
                     GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            complement(24301..25374)
                     /gene="recF"
                     /locus_tag="OQQ26_000759"
     CDS             complement(24301..25374)
                     /gene="recF"
                     /locus_tag="OQQ26_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HCS1856324.1"
                     /translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLIKDKQGDSKVRIDGTDG
                     HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQ
                     RNAALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
                     SFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            complement(25374..26474)
                     /gene="dnaN"
                     /locus_tag="OQQ26_000760"
     CDS             complement(25374..26474)
                     /gene="dnaN"
                     /locus_tag="OQQ26_000760"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HCS1856325.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
                     NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            complement(26479..27882)
                     /gene="dnaA"
                     /locus_tag="OQQ26_000761"
     CDS             complement(26479..27882)
                     /gene="dnaA"
                     /locus_tag="OQQ26_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HCS1856326.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
                     QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
                     PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
                     IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
                     GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVR
                     ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
                     DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
                     SHDIKEDFSNLIRTLSS"
     gene            28179..28259
                     /locus_tag="OQQ26_000762"
     CDS             28179..28259
                     /locus_tag="OQQ26_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856327.1"
                     /translation="MTIDKNWLNRSNKDPGRSLRFTRQPV"
     gene            28489..28629
                     /gene="rpmH"
                     /locus_tag="OQQ26_000763"
     CDS             28489..28629
                     /gene="rpmH"
                     /locus_tag="OQQ26_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HCS1856328.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            28646..29005
                     /gene="rnpA"
                     /locus_tag="OQQ26_000764"
     CDS             28646..29005
                     /gene="rnpA"
                     /locus_tag="OQQ26_000764"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HCS1856329.1"
                     /translation="MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            28969..29226
                     /gene="yidD"
                     /locus_tag="OQQ26_000765"
     CDS             28969..29226
                     /gene="yidD"
                     /locus_tag="OQQ26_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HCS1856330.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            29229..30875
                     /gene="yidC"
                     /locus_tag="OQQ26_000766"
     CDS             29229..30875
                     /gene="yidC"
                     /locus_tag="OQQ26_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HCS1856331.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAA
                     GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET
                     SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNT
                     FTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYT
                     ANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMATVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            30981..32345
                     /gene="mnmE"
                     /locus_tag="OQQ26_000767"
     CDS             30981..32345
                     /gene="mnmE"
                     /locus_tag="OQQ26_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HCS1856332.1"
                     /translation="MSDNDTIVAQATPPGRGGVGILRISGLKAREVAETVLGKLPKPR
                     YADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPG
                     LRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE
                     ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR
                     NKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            32588..32662
                     /gene="tnaC"
                     /locus_tag="OQQ26_000768"
     CDS             32588..32662
                     /gene="tnaC"
                     /locus_tag="OQQ26_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase leader peptide"
                     /protein_id="HCS1856333.1"
                     /translation="MNILHICVTSKWFNIDNKIVDHRP"
     gene            32883..34298
                     /gene="tnaA"
                     /locus_tag="OQQ26_000769"
     CDS             32883..34298
                     /gene="tnaA"
                     /locus_tag="OQQ26_000769"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709490.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HCS1856334.1"
                     /translation="MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSE
                     DVFIDLLTDSGTGAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQG
                     RGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFD
                     TGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAK
                     KYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPM
                     GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYR
                     IAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIR
                     AVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIK
                     GLTFTYEPKVLRHFTAKLKEV"
     gene            34389..35636
                     /gene="tnaB"
                     /locus_tag="OQQ26_000770"
     CDS             34389..35636
                     /gene="tnaB"
                     /locus_tag="OQQ26_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity tryptophan permease TnaB"
                     /protein_id="HCS1856335.1"
                     /translation="MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAF
                     ILIIAWFSMLHSGLLLLEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTY
                     AYISANGAIISETISMNLGYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKI
                     ISFVIVFGSFFFQVDYSILRDATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIIC
                     YGKRKDKLIKSVVFGSLLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLG
                     TKQHGIIEFCLLVFSNLAVASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPP
                     ALLYLVFPNGFIYGIGGAGLCATIWAVIIPAVLAIKARKKFPNQMFTVWGGNLIPAIV
                     ILFGITVILCWFGNVFNMLPKFG"
     gene            35769..36944
                     /gene="mdtL"
                     /locus_tag="OQQ26_000771"
     CDS             35769..36944
                     /gene="mdtL"
                     /locus_tag="OQQ26_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtL"
                     /protein_id="HCS1856336.1"
                     /translation="MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMATAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQG
                     LGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF
                     WAMAMMGIAVLMLSLFILKETRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVI
                     LTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQM
                     LFLAAGITLAVSPSHAISLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIA
                     QVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVATHEEIHHHA"
     gene            36919..37878
                     /gene="yidZ"
                     /locus_tag="OQQ26_000772"
     CDS             36919..37878
                     /gene="yidZ"
                     /locus_tag="OQQ26_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HCS1856337.1"
                     /translation="MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA
                     AESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR
                     ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWSLDTFLRYPHISICWEQSDTWAL
                     DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL
                     PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA"
     gene            38035..38784
                     /locus_tag="OQQ26_000773"
     CDS             38035..38784
                     /locus_tag="OQQ26_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HCS1856338.1"
                     /translation="MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRG
                     LLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLD
                     MELQRATRGFHSPHAPDNHTFSSNESLWISKQNDHNEARAQLITLRRSVLKLTGDVLN
                     DDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWELDGKHGWK
                     SLPDIHSRANNPTSRMMRFAQLSTVKAFSPN"
     gene            38806..39372
                     /gene="yieF"
                     /locus_tag="OQQ26_000774"
                     /gene_synonym="chrR"
     CDS             38806..39372
                     /gene="yieF"
                     /locus_tag="OQQ26_000774"
                     /gene_synonym="chrR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I chromate reductase YieF"
                     /protein_id="HCS1856339.1"
                     /translation="MSEKLKVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA
                     DIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLP
                     DQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQT
                     GEVIDQGTLDHLTGQLTAFGEFIQRVKI"
     gene            complement(39426..40763)
                     /gene="adeP"
                     /locus_tag="OQQ26_000775"
     CDS             complement(39426..40763)
                     /gene="adeP"
                     /locus_tag="OQQ26_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeP"
                     /protein_id="HCS1856340.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQVGMGAIFWGAIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANPETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLG
                     WMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAV
                     VVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH"
     gene            40930..41595
                     /gene="yieH"
                     /locus_tag="OQQ26_000776"
     CDS             40930..41595
                     /gene="yieH"
                     /locus_tag="OQQ26_000776"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconate phosphatase"
                     /protein_id="HCS1856341.1"
                     /translation="MSQIEAVFFDCDGTLVDNEAICSRAYVTMFREFGINVDLEEIFT
                     RFKGVKLYEIIDIISKEQGVTMVQADAEHVYRAEVARLFDTELADIAGANELLASINV
                     PMCVVSNGPVSKMQHSLGKLNMLHYFPEKLFSGYDIQRWKPDPALMFHAAKAMNVNVE
                     NCILVDDSSAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTTFTELSQLPALWKARGWN
                     ITR"
     gene            complement(41732..44175)
                     /locus_tag="OQQ26_000777"
                     /pseudo
     CDS             complement(41732..44175)
                     /locus_tag="OQQ26_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018451.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III effector"
     gene            complement(44593..45318)
                     /gene="phoU"
                     /locus_tag="OQQ26_000778"
     CDS             complement(44593..45318)
                     /gene="phoU"
                     /locus_tag="OQQ26_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HCS1856342.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVK
                     GQDFRHVGGDELDKLLAGKDPKE"
     gene            complement(45333..46106)
                     /gene="pstB"
                     /locus_tag="OQQ26_000779"
     CDS             complement(45333..46106)
                     /gene="pstB"
                     /locus_tag="OQQ26_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HCS1856343.1"
                     /translation="MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            complement(46197..47087)
                     /gene="pstA"
                     /locus_tag="OQQ26_000780"
     CDS             complement(46197..47087)
                     /gene="pstA"
                     /locus_tag="OQQ26_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HCS1856344.1"
                     /translation="MAMVEMQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGI
                     MAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLLVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKNKHG"
     gene            complement(47087..48046)
                     /gene="pstC"
                     /locus_tag="OQQ26_000781"
     CDS             complement(47087..48046)
                     /gene="pstC"
                     /locus_tag="OQQ26_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HCS1856345.1"
                     /translation="MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            complement(48133..49173)
                     /gene="pstS"
                     /locus_tag="OQQ26_000782"
     CDS             complement(48133..49173)
                     /gene="pstS"
                     /locus_tag="OQQ26_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HCS1856346.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGY
                     VEYAYAKQNNLAYTKLISVDGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWP
                     ITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWK
                     TNIKDSSGKPLY"
BASE COUNT        12219 a        12825 c        12176 g        12162 t
ORIGIN      
        1 cgccagaaat cctagtgcgg tacggatcca cgccagaaaa gtacgctcat tagccagcga
       61 gaagcggtaa tcgggcgctt ctccaaggcg ggaaattttc attgctgctc ctttgcaatt
      121 tcactaactc tctaccttta gcggtttttt cgcccgtttc ctgatatgct ttttccatcc
      181 gctacaagga ggtcagatgg gtatcatagc gcaaaataaa atcagttcat tgggcatgct
      241 gttcggtgcc atcgctttaa tgatggggat tatccacttt tcattcggcc ctttttccgc
      301 accacagcca acgcttgaaa gcatcgtggc ggacaaaacg gctgaaatta aaagaggtct
      361 tctcgccgga ataaaaggcg aaaaaattac caccgtggag aaaaaagagg acgtagatgt
      421 cgataaaatc ctcgatcaaa gcggtatcgc actggccatt gctgcgctac tttgcgcatt
      481 tattggcgat atgcgtaagg aaaatcgctg gggcattcgc ggcgcgctgg tttttggcgg
      541 cgggacgttg gctttccata ccttgctttt tggtatcggc atcgtgtgca gcattttgct
      601 gatattcctt atcttttcct tcctgaccgg cggttcactg gtttaagcag cctgaatcat
      661 gcccgccggg tgatcatcag cgggcattat cgtcagaact tctgtttttt ctcctccacc
      721 ttcactcctt gcgtcggtag gccggtgtca tagtcgcgta ccactggcga atagccatct
      781 tgtgggcgtg gacgaaacgc ccccatccag cgcggtcgtg catctttacg ccacggacgc
      841 agactccatt ggtaactgcg gaacggatcg cgaattttat ccatgtaatc caataaggcg
      901 tcatgcattt tgctgcgaac gtctgcaaaa cggatatcat caatcaggtt atgcatttca
      961 tttgggtcat tacggcgatc gtaaagttca tcactggtga agaggttgag taccagttta
     1021 aagtcatccg tcacccagca acgcaccgga ataaaaccgc caaagctgtc atgctcaatc
     1081 tcgtagcggt taaattccac cattacaccg cgtggctctt tcacggcaag gatattttcc
     1141 cccggcagaa tctctggttt ttcaatatct gccagcgcca tcattgtcgg cagtaaatcg
     1201 atatgactga ctggcgtatc gacctgtcgc cgctccttta ctgatcagct tatgtgcgcc
     1261 catcatttca ccatgatcgg aggtataaat gacccacgta ttttcacgtt gctctggcgt
     1321 taaggcattg atgacccgtc cgatttggtc atcaacaaag tcattgcagg caaaatagag
     1381 cggatggtga taaagcccgt catcaccgac tggcgatggc atcgcctgcg cccataagcg
     1441 gtgatgttcc ggtttgttcg ccaggtcatc ctgtgatttc tcgccaagtt cgtagtaaaa
     1501 atcagcgtat ttctctaaat actccaccgg acaggtgaac gggtgatgcg gctcatcata
     1561 cgaaaccacc atcaggaagg gttcctcggc gcgcgcgggc tgttgcagaa aatctaccgc
     1621 ccgattgctg atgcggtgcg cccaggtgaa ggtttcgtcg atatggttcg cctgtaaatc
     1681 ctcaacgctg tttaggccat tgcgccacag gctgatctct ttttccgtca gttcgctaag
     1741 gtagttcgcc ccatcgaacc agtaatcagc gtcccactcc ggcggacact cgccagtgcc
     1801 gaaatagtca tgaccgtcga gatgccattt gccaatgtaa caggtgtgat agcccgcatc
     1861 cttaaagtag cgtcccatag tggagatgtt tttgcccggc gcgacgttat tggtccacgg
     1921 gccggactgg ttagcgtaga taccggtaaa cagcccggcg cgcgctggtg tacaaaccgg
     1981 tgaacaggtg taggcggaat taaagcgaat actttccgcc gccagactat caatattttg
     2041 cgtattcagc ggcttaccgc tatagcaacc gaccatattg gtgtcctggg tatcggtcat
     2101 gatgaacaga aaattggggc gtttcatagg ctatccttcg cgtcgggagt aaaggttacg
     2161 gctgggtcgt gacgatgccg ccaactgtca aaaatcaggt agacaatcac tacggcagcg
     2221 atgaaataac tgatcatcgc taaccagcgc gtaccgtagc caccgaattc agccagcccg
     2281 gcatagacgc caatcatcgc gaacaggatg ccaattgacg cgatcttgac gtttttccac
     2341 ggtttcatgt ccacgttgat acagaacgta caggccagca catagaggaa atggaagtcg
     2401 aacttcacca gatagttgat ggtgatgtag ctgattatgc caatccccat cgccactttt
     2461 gccgccagcg ccggaatgcg cgggaagaaa aagcccataa tgatgatggt aaccagcggc
     2521 acgttgtaaa tgccgttgag ctgtttcatc cagctataca gcccctgcgg cgcgttggcg
     2581 atccacggcg ctaccagcac cgaaacgata gcgataaaga aaccaaattt gcgcccgacg
     2641 gtgaccagct gctgcggctc ggcattctgg ttaatgatgc gacggtaaat acccatactg
     2701 aataacgtac tggcgctatt cagaaagccg ttgaaggtac tgatcaccgc accaaataac
     2761 accgcgccga agaaacccac cagtggcact ggcagaacgt tattgaccag cgtcgggtag
     2821 gccatgtcgg ctttcggtag atcctgatac agatgaaacg caatcaaccc tggcagcact
     2881 agtaccagcg ggtcgagcat tttcagcacc gccgttaaca gcgccccctt ttgcccttcc
     2941 gccaggcttt ttgacgccag cgtgcgttgc acgatgccct gatttgtaca ccagtaaaag
     3001 gtgttcacca gaattaaacc ggtaaatgcc gcgccaatcg gcaagggatc ggtcgggcca
     3061 ccgactgagt ttaatttctc ggcgtgaatg gtggtaattt gctcaatgcc ctgcataaag
     3121 ctgcccttgc ccatcgcgat caggccaaat accggcacca tcaacccgcc gataaccagc
     3181 ccaataccgt tgatggagtc cgccactgcc attgcgcgca gtccgccgat caccgcatac
     3241 aaaattcccg ccagaccaag caaaattacc agtagccaga tagccgcacc gtgagaaatc
     3301 tgtagcgatt ccccgacgtg aaacaggctg ttgagcgcca acgcgccgga gtagagaaca
     3361 atcggcagaa agcagacgcc ggtggcaatg aggaagcaga agtcgatgat aatacgcgtc
     3421 gttttatcat aacgttcctc cagaaaatcg gggatggtgg caatgccgcg cttcagatag
     3481 cgcggtaaaa agattagcgc gaggaagatc agcgtcaccg ctgaagtcac ttcccagccc
     3541 atcaccgaca tgccgctttt gtaggcctgc ccggaaagac caaccagttg ttccgtggaa
     3601 aggttggtta acattaacga agcggcaata accggcgctt ttagtgaacg tccggcaaga
     3661 aaatagcctt gttgcgatcc ggtatctgtt ttgcgaacct tccaccaggt gatcaccgcc
     3721 accagcagcg taaaaccgac aaaactcaag atttgtaacg aattcatctc atagccctta
     3781 tttatgttta tgtcccggac gcatgaatat agggagaggt aaaatgcgtc gggtcaggca
     3841 gtcattctta aaatacaaac gtcgtatccc tgaacggatt gttttctgtt aagttcaggt
     3901 tgtgagcata attcgccgga gggatattaa aatgaatgga aaattgcaaa gttcagatgt
     3961 aaaaaacgaa actccgtaca atattccctt attgattaac gaaaatgtga tctccagcgg
     4021 aatttctctg atctcgctct ggcataccta cgccgacgag cattaccggg tgatctggcc
     4081 gcgggacaag aagaaaccgc ttatcgccaa ctcatgggtt gcggtgtata ccgtacaagg
     4141 atgtgggaaa attcttttaa agaatggcga acaaataact ctgcatggca actgtattat
     4201 atttttaaag ccaatggata ttcactctta tcactgtgaa ggtttagtct gggaacagta
     4261 ctggatggaa tttaccccca ccagtatgat ggatattccc gttggtcagc aaagcgttat
     4321 ttataatggc gaaatttata atcaggaact caccgaagtt gctgagttaa taacttcacc
     4381 agaagcaata aaaaataatc tggcagtcgc ttttctgacg aaaattattt atcagtggat
     4441 ttgtcttatg tacgcagacg gtaaaaaaga tccacaacgg cggcaaattg aaaaattaat
     4501 tgccacttta catgccagtc tgcaacaacg ctgaagcgta gccgatatgg ctgccacgat
     4561 cccctgtagc gaagcctggt tgcgtcgtct gtttttacgc tataccggca agacgccgaa
     4621 agaatattac ctcgatgcgc gtctggatct ggcgctatcg ctattaaagc aacaaggaaa
     4681 ctcggttggc gaagtcgctg atacgctcaa cttcttcgac tcctttcatt tcagcaaagc
     4741 ctttaaacat aaatttggtt atgcgccgtc agccgtgcta aagaatacgg accagcaccc
     4801 aacggatgcc agtccacaca attaacgtaa ctccggccag tacgctttgt tggcctccag
     4861 caactcatcc agaatagctt tggcgaccga ggcgctcggt accgttttcg acaacgtaat
     4921 cgcctgccac aggtgctgat atgaacgctg ttcccaggca tccacgacca gtttttccac
     4981 cgccacttgc tgactcatta accctttctg aaactgcggg atatcgccga ccaccagtgg
     5041 ttctggtccg ttgtgcccga ccagacacgg gatctcgacc atcgcttcat catcaaagtt
     5101 atgaattgcc ccgttgttag gcacaatcag caacatccgc tcctgagtgt tgaaggcaat
     5161 tgccgccgcc agatcgacga tgtatgacgc atgttcgtca atttccagct tgcccgccgc
     5221 tgaatttcct gccgctgtaa tggcgcggca agcatcgaaa acctgtttct cgcgatgttc
     5281 catcacctca ttcgcgcggg tatgttcagg gttggaatgc tgaacgacat aatccgggaa
     5341 gagataatat ttcagatagg tgtttggtaa tgtatccggg tccagtgcct ggacatcccg
     5401 cgcttttgca taggtgtcgt tccagctcgc ttcagtatgt gtatcttgct gcggtggaac
     5461 ataaccgtgc ttagagacat attgccgcag ctggggcatc aggtcgttgc cctgcaaatc
     5521 ttcaattgat gtccaccagc caaagtggtt caggccgtag tagcgcacgc gcatctgttt
     5581 gcgatcttgc agcccaacaa tttgcgccat ccggctttca ataccgattg gcatgtcaca
     5641 gatgttgagg attttcgcat tcgggcgcag acgacgcgtg gcttctgcga caatggctgc
     5701 cgggttggag tagttgagca tccaggcatt tggtgaatat ttttccatat aatccaccag
     5761 ttccaggacg ccgccaatgg aacgcatgcc gtacgctatt ccgccgggtc cgcaagtttc
     5821 ctgaccaaca acgccgtggc gcagcgggat tttttcatcc agttcgcgca tcgggtattt
     5881 gccgacgcgg atgtgcgcca tgacaaaatc aacgtcgctg aatgccactt caggatcggt
     5941 ggtgtaacta aacgcaatgt ccggcgcttt ttctttaagg atgactttac aggcttcggc
     6001 aatcacttcc tgccgcgcgc catcgttatc ataaaatttc agtgcacgaa gcgggaaacg
     6061 gtcctgattc gccaggagca tcaacacgat gcctggcgta aaggtgcttc caccgcctgc
     6121 gacaaccact gagaatttgg tcattatact gcctccgtaa tggcaacatt ttctgctgat
     6181 tgatgagaat taattaagct atcgagctgt tcacgcaatt gggatacatg cagaccaatg
     6241 atcacctgaa tggcatcgcc actacggaag acgccgtgcg ctcccagctt tttaaagact
     6301 tcgtcatcca gcgtttgtga catgtcatgc agtgcaatac gtagacgcgt cgcgcaattg
     6361 ttaatgctgg agatattgcc gcccccgccc agggcttgca ggataccggc agcctgatcc
     6421 agctcttttt ttggctctgc agcggtggtt tggcctcgcg aggctttgta ttcggctttt
     6481 gagtagagtt tcacttccgc atcttcacgt cccggcgtgc acatgttgaa ctgcagaatc
     6541 agggtgcgga aaaccacgaa gtacagcagg gtaaagcaca acccaatggc gatttgggtc
     6601 agcatcatat ccgcgtggtt gctgaacatc gggatccagt tttgcggtaa aacctggtca
     6661 atcagacctc cgcccatgtt gcccaccaca ccaaagagat acattacggt cgacattgag
     6721 gccgccagca tggcggttaa ggttgcggga atcagcaagc ccgccacttt tacccgattt
     6781 tccggtgcgg cagtgaagta catcgctaaa gaaatgccca cggcaccaaa gatttttgag
     6841 ttaccgtgca gggcaaaacc gccttccggg aacaacgatt tcagcggctc ggcgctcaga
     6901 ctgaactctt gcagatgctg cgcccagtac atctgaatgc cgccttcaac agctgccgga
     6961 ccaaagataa acggtccgta gatgaagtgg tgtaaaccgg ttgggatcag aatacgttcg
     7021 aggaaggtgt aaacccacac cccaagcgca cccgccgaac gcaggaacgc ttgcagagat
     7081 tcaatcccca tttgtacttt tggccagccg agcaatgtca gccaggcaca ggggatcatc
     7141 accaggaagg cgataatcac cacataagac gtcccctgga aaatgccgag aaaaaccggc
     7201 agttttttat cgaacagacg gttatgcagc gccgtcacaa tgccggaaat gataattgcg
     7261 ccgataatgc tggtatcgag ggttttaatc ccggccataa ttgtcagacc gctacctgcc
     7321 accgcgtcct gagtgaaatc gacgccgaag taacttcccc aggtcattcc catcgcattg
     7381 atgaaatagt tccaggtcag gaaactcacc atcaccgcca gacaagctcg cccctgcgct
     7441 tgtttagcaa ggccaatggg taaaccgaca gcaaaaatca gcggcatatt acggaatacc
     7501 gtccaaccgc cctcctcaat aatgtgtacg atttgcgcga ataaactgtt cggatcggtc
     7561 agtgattccc cgacaaacat cgggttttgc agcaagatgg caagacccac cacaatcccg
     7621 gcgaagggaa acagcagcac tggcgtaaac atcgcgccgc caaagcgttg aatttgactg
     7681 agcatttcca catcctcttt tctcaattct gtaagtagga agcctgattg gttatgcggc
     7741 aggcctagag cgaggatagg aagatgcgat cggcagaaca tgacgaccca atgggattcg
     7801 tgatcgcttt catgcttttc gttgggcggt agagatctac gttttctcga aaaagtagac
     7861 atctgtgagc acaggtacac agcatcgaac acatctttaa aaaaaagatg ttttttcaat
     7921 cgattaagca gaacttgtgg gcgcattccc cgggcttgca ggcaaaaaag agatctagag
     7981 atgatctaca aaagcattgc ggagcggtta agaattcgac ttaattccgc ggatttcacg
     8041 ctaaacagcc ttcttcccgg tgaaaaaaag ttggcggaag aatttgcggt atcgcggatg
     8101 accatccgta aagccattga cctgctggta gcgtgggggc tggtggtccg ccgccacggc
     8161 agcggcactt acctggtgcg caaagatgtg ctgcatcaaa ccgccagcct gactgggctg
     8221 gtggaggtgt taaaacgtca gggaaaaacg gtcaccagcc aggtgctgat ttttgaaatc
     8281 atgcctgcgc ctccggccat tgccagccag ttacggattc aaatcaacga gcagatctac
     8341 ttctcccgtc gcgttcgttt tgtggaaggg aaaccgctga tgctggaaga cagcgatatg
     8401 ccggtaaaac tgttccgtaa cctttcactg caacatctgg aagggtcgaa gtttgaatat
     8461 attgaacaag agtgcggaat tttgattggc ggtaattatg aaagcctgac gccggtgctc
     8521 gccgatagac tgctggcgcg gcaaatgaag gtagcggaac acacgccact gctgcggatc
     8581 acctcgttgt catatagcga gagcggggag tttttgaatt attcagtgat gttcagaaat
     8641 gccagcgaat accaggtgga gtaccattta cggcgactcc acccggaaaa gagttaaccg
     8701 atactccaga agagcaccgc cagtaattgg ggggtgataa tgcgcaggaa catcactaac
     8761 ggatagacag tggcgtaaga gagcgccgcc gcaccactgg ttggatgaag attattagca
     8821 aacgccagcg ccggaggatc ggtcatggaa cctgccagca tcccgcacat ggtcaggtaa
     8881 ttcattttgg ctaacatccg cgccagaatg ccaacagtaa tcagcggaac ggcggtgatc
     8941 agggcaccat aaccaatcca gcttagccct tcgccattga ccagggtatt tacaaaatcc
     9001 ccaccagatt tcagaccaac gaccgagagg aacagcacga tccccagctc ccgcagcgcg
     9061 aggttggcac ttggcggcat aaaccagtac agcttgccga tactgccgat acgcccgagg
     9121 atcaacgcca taatcagcgg accgcccgcc agccccagtt tcaacgcggc cgggaatcct
     9181 ggcacaaaga cgggtataga acctaacaat acgccaagcc cgatgccaat aaacactggc
     9241 agcatctgaa cctgttgcag tttttgctgc gcattcccca gcacattggc aacggcatca
     9301 attgcggacg gacgccccac caggttgagg atatcgccga actgcaggct gatatcgcca
     9361 ctggcgacca gttcgacccc ggcacggttc aggcgcgaga taacaacgtc atagcgtttt
     9421 ttaaagtgca ggtcgcgaat acgcttacca agcacgtttt cattggtgac caccacacgc
     9481 tcgacgcgca aatcagtgcc tttcgtagac agcgaggtat cgacctcctg accaatcacc
     9541 agttgcgcat tatgtaaatc cgctggctgc cccaccagat gcagcaaatc gcccagttgg
     9601 ataatggtat ctggcgaagg tacttttagg gtttcttcgc gtttcagacg cgagcagata
     9661 attttgtcgc cgttgagaat cggtacatct ttaatggcta aatcatgcag gttagggttc
     9721 tcaacgcgaa tattgatagt cctgatcagc gcgccgccat tggtgcgtga agactcgtgc
     9781 tgctgggctt ctgtctcgac attgacgcgg aaaataaccc gcaacatcca catggtgaac
     9841 aatatcccgc aaatgccgaa tggatacgcc atcgcgtaac tcatccccat ctgatcgacc
     9901 atttccattg gtgtacccag gtcgcgcaag atctgctgcc ctgcccccag cgccggcgta
     9961 ttggttaccg caccggagaa aatccccagc actaccggca gtggaatatc aaacagttta
    10021 tgcaggatgg cggtaaccag accaccgatg atgacgatca gaacagcaaa caggttgagg
    10081 cgtaatccgg agacgcgcaa tgaggcaaag aagcccggcc ctacctgaat cccgatagta
    10141 taaacgaaca ggatcaggcc aaattcctga ataacatgca gcatatcgct acttaatgtc
    10201 atccccgcct gagaaacaaa atggccgacg atgatcccac caaacagcac gccgccaata
    10261 cctaatccta tgccgcgaaa tttgacgttg ccgataaaca aaccgacgac tgccaccaaa
    10321 gccagaatac tgaccgttaa tgctatatca ctcatcgtcc atttctcttg agataacatt
    10381 ttaattgcta cggattatgg ctgaatcggt gaagcagatt tgccttatag cgcacattat
    10441 cacgggaaag aacgtgccga aatatcttaa acaggcgaaa tttaacgcat tgttgaagaa
    10501 gaaagacaaa aaaagcccca ccagaatggc ggggcaaaga gaatagctag ttagctattt
    10561 aacgcgggac gttcgctgat agcgatacgc tgcgctgcga tgggttcagg ctcattacga
    10621 attaaatcaa tatgcagtaa accgtttacg aaggttgcgc cagagacttc catattttca
    10681 gccagcgtaa agctcaggct aaatggctga ttcataagcc cttgatgcag ccattttttc
    10741 tcttcttttg gctgctccgg cgtgcctttt acgctcaggc gcgtaccttc cagttgaatc
    10801 tctaaatctt cctgacggaa acctgccagc gcaagggtaa tgcggtagtg gttatcgtcg
    10861 cttttctcaa tgttgtacgg cgggaagctc tggctttcac cggcgttttg cagtgcgttg
    10921 gccagtttgt caaaaccgat ccattgacgc atcagtgggg ataaatcgaa gttacgcata
    10981 gtcatttctc cttctaagaa gcgagtaagt acctgcaaat ccgaagattc gcatatgctc
    11041 cctgacggcg agcatggaga tgtcaggccg cgccaggcgg ccttagggaa ttagttgatt
    11101 tcgatacggc gcggtttttt cgcttccgga atcacgcgtt cgagatcgat atacagcaaa
    11161 ccatttacca ggttagcgcc acgaacatga atgttctcag ctaactggaa tttgcgttca
    11221 aagttgcgtt cagcgatgcc ctggtacaga taggtgcgct ctttttgttc gtcggcgtga
    11281 gcacctttca ccaccagcag attatcctgg gcggtaattt ccagttcgct ctcagcaaaa
    11341 ccagccacag cgatagcaat gcggtaatgg ttttcgtcta ccagttcaac gttatacgga
    11401 gggtagccgc cattactctg gctctggttg ttttctaagt ggttaaacaa acggtcaaat
    11461 ccaatagcag aacggtaaag cggggataaa tcaaagttac gcataatcaa taactcctga
    11521 aatcagcgag aatgtaaaac cttccacaat ggacaggtca ggtagccaga acacccatca
    11581 ggcgcgtcct catcggctac gatgtaaaaa tgggtctgga aatgaacttt tcaagcctta
    11641 tcagcggact tttttttgca gtttatggtc tattgcatag actgaggggg cagcacgaaa
    11701 cgttaaagtg cgatagccgc cacagagcga cgtaatgatg atgttatttt cagcaaggga
    11761 tcgctataac tcatcaggcc aacacccacg atcaacagat gaatttatta tgataagaaa
    11821 tgtgttgtta gcgttcatga tatgcagcgg aatgacatta ctcggaggat gctccagcgt
    11881 gatgtcccat accgggggga aagaaggaac gtatcccggc acccgcgcca gcgccaccat
    11941 gattggcgac gatgaaacca actggggcac taagtcgctg gcgattctcg atatgccgtt
    12001 taccgctgtg atggacacgc ttttactgcc gtgggatgtg ttccgcaaag acagctcggt
    12061 gcgctcacgc gttgaaaaaa gcgaagccaa cgcgcaagcc accaatgcgg ttattccacc
    12121 ggccagaatg cctgataact gatttagcga tcagtttcgg tgctccacaa ctggccgcct
    12181 tccatccacg ccagccattg accatccggc gagaagacca cggcgtccgc agaaggtgga
    12241 ttggcgtggt tttcggttaa atactcaacc tcgccgcttt gcgcatgggc acaagcaatt
    12301 cgattatcca gcacaaagcc caaccattct cctgacggat gccagttaaa tgcagactga
    12361 atatccgttt tgttatgggt taactggcgc ggctcgccgc cctgtggcga gataagccac
    12421 agttgcacaa tgccgttatc atcacgcatt aaaaacgcga tttgcgtacc ctgcggatta
    12481 cagcgcaccc agtggcgcgg gacgttgact aaccccggat aagcccgatg gtgggtaaag
    12541 gttaaacgtc gctgcacgac gccgcgcggt ggcgcgggca gggttgtttc cgttccactt
    12601 aacggcgctt cacctgctgc tttccagcca gcttcatctt gcggtaactc aacgataaac
    12661 agctccggca ctttctcgcc ctttggcgaa agtgtgtcgc caataaacgc cagcgcgtga
    12721 tttcctaccc atccttcttc ataagcacga ttgatttcat cactgccagg ctgcggcgtg
    12781 ggcgtggttt tactcaccag cacgcaccag tggctaccgc tgtattcacg cggatgctgc
    12841 ttttgtacgt tgaccgggcc aaacggcgca gcaacaccga cgtttcgcaa atccagcgcc
    12901 ggatcgagtt catgcattac atggtcgtta taggtaaagc tcaccctttc accgttcggg
    12961 ctaaagacat gcacatggct gccgccgcgc agcgctcctg gcgtatacgg cgcggtaata
    13021 tccatcgcat caaggttact catcttgccg ccttcaaaaa tcactccgcg ccgatgatgg
    13081 aagtcgtaat gccatgtttt atcaggattt tccgggccgt ggatgaagac atacttctct
    13141 gacttcggat gaacggtcac cacgccgacg tgtgcgcctt gtgacgcgcg atagataacc
    13201 tcgacctcgc cggtatggat attcacacgc tcaatggtct cgccggtaaa cgacgcccca
    13261 gaaggacgca cgtcaaatac cagccactgg ctgtcgggcg tccaggtatt ggtattggtg
    13321 agcaggtgat tacggggagc aaaggttatc tgtttcatgg cgcggtcctg atacaaaacg
    13381 gttcccgcca tcatacttca caaggacttc actttcagac aatagtcttt tgccatcgtg
    13441 atgaatgtga gtgaaaagat ggaacatttc gacgtggcga ttattggcct cggcccggca
    13501 ggatcggcgt tggcacgaaa gttagcaggc aaaatgcagg tgatcgcgct ggataaaaag
    13561 caccagcatg gtactgaagg tttcagcaaa ccttgtggcg gtctgctggc accggacgcg
    13621 cagcgatctt ttattcgcga tgggctgacg cttcctgtcg atgtgatcgc taatccgcag
    13681 attttcagcg tcaaaaccgt cgacgtcgcc gcatcgctca cgcgtaacta ccagcgaagc
    13741 tatatcaata ttaatcgcca tgctttcgac ttgtggatga aatcgctgat ccccgccagc
    13801 gttgaggttt accacgatag cctgtgccgg aaaatctggc gtgaggataa taaatggcat
    13861 gtcatttttc gtgcagacga ctgggagcag catattaccg cccgctatct ggtcggtgcc
    13921 gatggtgcca actcgatggt gcggcgacat ctctacctgg atcatcaaat ccgtaaatat
    13981 gtcgcaatcc agcagtggtt cgcagagaaa catccggtgc cgttctactc ctgcatcttt
    14041 gataatgcga taactgactg ttactcatgg agtatcagca aagacggtta ttttatcttt
    14101 ggcggtgctt atccaatgaa agacggtcag acgcgtttca cgacgctgaa agagaaaatg
    14161 agcgcctttc agttccagtt tggtaaggcg gtgaaaagcg aaaaatgcac ggtgctgttt
    14221 ccctcacggt ggcaggattt tgtctgcggt aaggacaacg cctttctgat tggcgaagcg
    14281 gcgggattta tcagcgccag ctcgctggag gggattagct atgcgctgga tagcgcagag
    14341 attctgcgtg cggtgttact gaagcagccg gagaagagca acgccgctta ctggcgcgcc
    14401 acccgcaaac tgcgtttaaa actcttcggc aagatagtaa aaagccgatg cctgaccgca
    14461 ccggctttaa gaaagtggat tatgcgcagt ggtgtggcgc atattccaca gttgaaagat
    14521 tagccaacgc gcttcacatc gcccaccagc aggatgtaag agagcgcgcc aatcaacgcg
    14581 acggcggaga tataaaccag tgcaggtgcg aaaccgtaac cctgcgccag gtaccccacc
    14641 accaacggaa cggtgatgcc gcccagacca ccggcgaagt taaacacgcc gccggttaaa
    14701 ccaatcaggc gcatcggtgc cagagaagaa accagcgacc aggtaatcga agcaaaaccg
    14761 ttaccgaaga atgccagcac catcaggcac ataatcatca tcggatcgtt agtgtagtta
    14821 gcgcccataa tgcaggtgga gatcagcaag ccgcagataa tcggcgtttt acgcgcaaag
    14881 cccagtgaaa agcccttacg taccagcaga tccgcgaccc agccagagag caggacgccg
    14941 acaaacgccg cgaggaatgg caccgtggtc ataaagcctg ctttcagcgc cgtgattcct
    15001 tttttcctgg gttaaatagt tcgggaacca ggttaagaaa aaccacagtg tagaagccac
    15061 cgcaaattgc ccaagataga cgccgatcag tttacgatgg aacaccagct tccagtcttt
    15121 ggctgttaac ggctgacgtg cctctttttt caccggcgca tcaccatcca ccagaccgcc
    15181 gccatcacga atgtaatcca gttcagcttt gctgatacct ttggtcaggc gcggcggctg
    15241 ataaacctta aaccaaatca gcgaccagat aatgccgata ccaccagtga caatgaacac
    15301 ccagtgccag ctcaacatct cctgaatcca gatcagcagc ggagtcaaaa acgccagacc
    15361 gacaaactga ccagacgtat aaaaaccaac ggcggaagcg cgttcatgtt ccgggaacca
    15421 gctggtcacc atccggttat tggtcgggaa agcgggcgct tcgaaaatac cggttatcgc
    15481 gcgcagacca attaatgaca ttaatcccgt ggcaaagccc tggaataaag tcgccactga
    15541 ccagccaaat atcgcgataa aataagtcac gcgagaacct acgcgatcta aaaaccaacc
    15601 gccggggatc tgacatagcg tataaagcca tgcgaaggcc gaaaatacat agcccatttg
    15661 cgctttggta ataccgaact cttcctgaat atgggcggaa gccacggcca ggttagcgcg
    15721 gtcaacataa caaatgacca ccgtaataaa gatcatcacc agcgtcagat aacgccgacg
    15781 ccccggtttt gctgcattaa cgggaatatc catagcgagc tttctccaga ttttgggcat
    15841 agcgaagccg ctcaccatgc cctgtaattt acagagggtt atatttttgt attgctgttt
    15901 tagtgcccga tgaggggctt acgtggcagg aattatcact ctgctacgct gttatcttca
    15961 tgacgccaga gcggattacg ccagtccggg gcatttttac tgaactcaat aactttagct
    16021 ttgtcgattt ccacacctaa gcccggtttc gttaacggtt taaagaagcc gccaaccatg
    16081 ctgaagtctt ctttgttttt cacaaagtcg agtaactccg cgcctttgtt gtaatgaatg
    16141 cccatacttt gttcctgaag tacggcgtta taggaaacaa agtcgatatg caggcaagcc
    16201 gccagtgcaa tcggtccgag cggacagtgc ggcgcaaggg tcacatcata ggcttctgcc
    16261 attccagcaa ttttgtagca ttcggtaata ccgcctgcat gggagagatc cggttgcaga
    16321 atcgaaatac cgcctgtctc cagcacgcgt ttaaaatcga aacgtgagaa catgcgctca
    16381 cccgccgcca gtggaatatg cgtttgtgcc gccaatttcg ggtagtattc ggcttgttcc
    16441 gccagcaccg gctcttcaat aaacagcggg cgatacggct ccagttcttt aatcagcact
    16501 ttcgccattg gcgcgctgac gcgaccgtgg aaatcaagac caaactcaat ctgattgcca
    16561 aaagcttcac gaatttgtgc cacggtgttg actgccgcat ctaccgcgcg ggagttatca
    16621 attagcccca gttcttcaca accgttcagt ttgaaggtat cgaagccgat ttcgagcagg
    16681 gttttaatgc cgtcgataac atccgccgga cgatcgccgc cgacccaact gtaggcttta
    16741 attttgtcgc gaaccaggcc gcccatcagt tgccagactg gcgcattcag cactttgcct
    16801 ttgatatccc ataacgcctg gtcgatcccg gcgatggcgc tcatcaggat tggaccgcca
    16861 cgataaaatc cggcgcgata catcacttgc cataagtcgt tgatgcgcga aggatcctga
    16921 ccaatcaaat agtcacccag ctcgtgaact gccgcttcca ccgtacgggc gcggccttca
    16981 atcacgggct cgccccaacc gaccacgcct tcatcggttt caattttcag gaacatccag
    17041 cggggaggta aacgatacgt ggtaattttg gtgattttca ttgcactgcc tctcgatacg
    17101 ccttaacaaa tgctgctgcc tgctgcctgc tgcctgctgc ctgctgcctg ctgcctgctg
    17161 cctgctgcct gctgcctgct gcctgctgcc tgctgcgcgg tgcgttctac ggactgcccg
    17221 gcgcgataga gatcgctgcc taagcccgcc ccaacacaac ctgcgtctat ccactgcgcc
    17281 aggttttctg gcgtcacgcc gccaacggca aagactgcga tgtccggtgg taataccgct
    17341 tttaacgctt tgatgtattg cggaccaaaa gccgatgacg gaaatatttt cagcgcctgc
    17401 gcgcccgctt cgagcgcggt aaaggcttcg gtcgccgtcg cgcagccggg gcaaacggtc
    17461 atgccgtagc ccaccgcgcg gcggatcact tcactatgga tattgggcgt aacgatgagc
    17521 tgacagccca tcctggcgag cgcatcaacc tgttcaggtt tcagtaccgt acctgcgcca
    17581 atcaacgcct tgtcgccgta cgcatcaacg atggcgggaa tgctttgctc ccattgtggg
    17641 gaattcagcg ggatttcaac cgcgtcgaac ccggcgtcaa tcaccgcgcc aacatgcgcc
    17701 agcgcctcgt cgggcgtaat gccgcgcaaa atggcgatca gcgggagttt agtttgccac
    17761 tgcatgagca atgctcctta taccagcctg aaatgccgtg tcgcccgcca ccgccgccac
    17821 gtcgcaaccc atcgcctgaa aggcttgctg gtagcgcgcg gtcagcgatg ttccggcgac
    17881 aagggtgatg gcgtgttgat gggtcacata gtcgcgcata ctggcaacct ctgcgccaat
    17941 caacaaacca gagagaaatt cgctgacctg ttcgcgggga agtgttccca gcacatgcga
    18001 ggcgcgaact tcaaaaagct gcggcaatat ggcgggcgca ttaaggccgc gctcaaggcc
    18061 agccgcgaag gcatcggcag agttttcctg cggcggcaaa cctgcgccaa tcaatgagtg
    18121 atttaacagt aaatgatgta attcaccggt catcacggtg cgaaaatcgt tgatttgctg
    18181 gctatcggcc tgcacccatt tgcaatgggt tccgggcata acataaagag aggaaggagc
    18241 cagagctcgc gcgccgatca attgtgtttc ttcgccgcgc atcacattgt ggttatcgtc
    18301 atgagagacg cataatccgg gaataatcca gatattgtcg ctaacagacg ttaattgttc
    18361 gccaatagac gaaaaacggg caggaacaga taaatacgga gcaactttcc agccgacatt
    18421 gctgccgacc attcctgcca ttaccactgg cgtattctct tcacgccagt cggtcgtgac
    18481 ttctgctaac accgcagccg gagattttcc gttcaggcgc gtgacgcctg cttctgattg
    18541 cctgctctcc aggcagtggt cgccctgata aagccaggcg cgcagattgg tcgatcccca
    18601 gtcaattgcg atgtagcgag ctgtcatgtg atttccttta accttcgtgt cgagctggcg
    18661 atcatggtaa gcgccgcctg ctctgccgca tcgccgtcct gatgccgtat cgcatcgaac
    18721 agcgccttat gttcctggag cgtttgcggc atgttggcct catcgcccat ccaggttcgt
    18781 tcaaaaaccg cccgctgcag cgaactgatc gcaatgctaa gttgctgtaa caccgggtta
    18841 tgcaccgact gcagcaccgc ctcgtggtag cgaatatccg cttcgttaaa cgcttcgcgg
    18901 tcctgattgt tggcaatcat ctcgttcagc gccgattcaa tctgcgccag atcgctggag
    18961 gtcgcgcgct ctgctgccca acgggcaatc gccggttcca ccagatttcg cacttcgctc
    19021 atggcactga taagccgtgg gtcgtagtcg ttttccagca cccattgcag tacgtcagtg
    19081 tcgaggtaat tccactggtt acgcggtgcc acaaacgcgc cgcgataacg tttcatttca
    19141 atcagccgct tcgccatcag cgaacggaac acctcacgga tgatgttgcg ggaggttgca
    19201 aactcctcac agagttccgc ctcagccgga agtggagagc ctggtacgta tttgccgtga
    19261 acgatctgtt tacccagcgt aatgacaatg cgatcggttt tattgagagt catggagagt
    19321 ccttgtgctc tgtatgttct tctctacttt accccgatcg atgcataacg cggcaacttt
    19381 gtagtaccag cgtgatgacg ttcgcgtttg ctgtgtgcgt aatgtagtac aaacttatat
    19441 tattgtactg caatttagat cacaaaaaga acaatgcata aaaaaatgac atgcgtcggg
    19501 cagaaatctg aaaagggata tcaggcgcta aacaggaggg aaagaagagt atgctttcaa
    19561 cggcttagct actcgtttaa aggattaatc atgaagttga attttaaggg attttttaag
    19621 gctgccggtt tattcccact ggcgctgatg ctttcggggt gtatctcgta tgctctggtt
    19681 tcccataccg caaagggtag ttcaggaaag tatcaatcgc agtcagacac catcacgggg
    19741 ctatcgcagg caaaagatag taatggaaca aaaggatatg tttttgtagg agaatcgctg
    19801 gactacctta tcactgatgg tgccgatgac atcgttaaaa tgctcaatga tccagcactt
    19861 aaccggcaca atattcaagt tgccgatgac gcaagatttg ttttaaatgc ggggaaaaag
    19921 aaatttaccg gcacaatatc gctttactac tactggaata acgaagaaga aaaagcactg
    19981 gcaacgcatt atggttttgc ctgtggtgtt caacactgta ccaggtcact ggaaaaccta
    20041 aaaggcacaa tccatgagaa aaataaaaac atggattact caaaggtaat ggcgttctac
    20101 catccattta aagtgcgatt ttatgaatac tattcaccca gaggcattcc ggatggtgtt
    20161 tccgcagcat tactgccagt gactgttacg ctggacatca ttactgcacc gctgcaattt
    20221 ctggttgtat atgcagtaaa ccaataatca gtaagcgggc aaacgcgttt atgctgtttg
    20281 cccgtccact gattaattca gcacatactt ctcaatagca aacgccacgc catcttcaag
    20341 gttagatttg gtgacaaagt tcgccacttc tttcaccgaa ggaatagcgt tatccatcgc
    20401 cacaccgacg cctgcatatt caatcattgc gatgtcgttt tcctgatcgc caatcgccat
    20461 gatttcttcc ggtttaatac ctaacacgtc ggccagtgat ttcacccccg tacctttgtt
    20521 aacgcgttta tcgaggattt cgaggaagta cggcgcactt ttcagcacgg tatatttctc
    20581 tttcacttcc tgcggaatac gcgcaatggc ctggtcgagg atggcgggtt catcaatcat
    20641 catcactttc aggaactggg tattggggtc cattttctcc gcttcgcaga acaccagcgg
    20701 aatggtggca acgaaagatt catgcactgt gtagtagctg atatcgcggt tggcggtgta
    20761 cagcgtggtg cggtccaggg cgtggaaatg agaaccgact tcgcgagaga gtttttccag
    20821 gaaacgatag tcgtcataac tgagagcagt ttgcgccacg gtgctaccat cagcggcctt
    20881 ctgtaccagc gcgccgttat aagtaatgca gtagtcgccc ggctgttcca tatgcagctc
    20941 tttcaggtag ttgtgcacac ctgcatacgg gcgacccgtc gttagcacga cattcacgcc
    21001 acgggcgcga gctgcggcaa tcgcattttt aacggcgggt gaaatggtgt gatcgggcag
    21061 cagaagggtg ccatccatat cgatagcaat gagtttgata gccatgagtt ccccaggtag
    21121 attagttcct gacccatgct aacgcgattc cgctcaaaaa tcagtacaac acccgaggga
    21181 aaagggggat gcaacgcggg ttgcatgctc cccatttgct tagtggaaga gtttcccttt
    21241 cagcagttcc atgcctgcgg aaagcagatc gttattggct tgtggagaca cttcaccttg
    21301 cggtgagagc gcatcaataa tcttcggcaa ttgttctgcc agtaaactag aagctgtact
    21361 ggtatccacg cccagttttt gtccaagatc ggataccgca tttgtgccga gtgctgattc
    21421 cagttgctcg ccgctaaccg attgattgcc ctgttgatta ctcagccagg ttgagagaat
    21481 ggcacctaag ccgccacttt gcagtttttc cagcagcacc tgaatgccgc cctgctcctc
    21541 aacccaactt aaaatagcct gatatttccc cgcatcgcct ttcagaaagg caccgacaac
    21601 ttcatcaaaa agccccatga taatcacctg taaagcgtta cgtgttgacc caaaaagtat
    21661 agatctgcgg gatgataatt gcggattgca gaaataaaaa gggcggagat gatctccgcc
    21721 cttttcttat agcttcttgc cggatgcggc gtgaacgcct tatccggcct acaaaatcat
    21781 gcaaaatcaa tatattgcag gagtctcgta ggactgataa gcgtagcgca tcaggcacgc
    21841 tcgcatggtt aacgccatta aatatcaata ttcgccgctt tcagggcgtt ctcttcaata
    21901 aacgcacgac gcggttctac ggcgtcgccc atcagcgtgg tgaacaactg gtcagcggca
    21961 atcgcatcct taacggtaac gcgcagcata cgacgacttt ccgggtccat ggtggtttcc
    22021 cacagctgtt ccgggttcat ctcgcccaga cctttataac gctggatgga gaggccgcga
    22081 cgggactctt tcaccagcca gtccagcgcc tgctcgaagc tggctaccgg ctgacgacgc
    22141 tcgccacgtt cgataaacgc atcttcttcc agcaagccac gcagtttctc acccagcgtg
    22201 cagatacgac gatattcgcc accggtgata aactcgtgac ccagcggata gtcagtatcc
    22261 acaccgtggg tacgcacgcg aacaatcggc tcgaacaggt tttgctcggc attggtgtgg
    22321 acatcaaact tccactggct gccgtgctgt tctttgtcgt tcagttcgct gaccagcgcg
    22381 ttcacccagc gggtaacggt ctgctcatca gagaggtcgg cttccgtcag cgtcggctga
    22441 tagataagct ctttcagcat tgctttcgga taacgacgct ccatgcggtt gatcattttc
    22501 tgcgtcgcgt tgtactcaga taccagtttc tctaacgctt cgccagccaa tgccggtgca
    22561 ctggcgttgg tgtgcagcgt tgcgccgtcc agcgcgatag agatctggta ctgatccatc
    22621 gcttcgtcgt ctttaatgta ctgttcctgc ttgcctttct tcactttgta cagcggcggc
    22681 tgagcgatgt agacgtgacc gcgttcaacg atttctggca tctgacgata gaagaaggtc
    22741 aacagcagcg tacgaatgtg cgagccgtcg acgtccgcat cggtcatgat gatgatgctg
    22801 tgataacgca gtttgtccgg gttgtactcg tcacgaccga taccacaacc aagcgcggtg
    22861 ataagcgtcg ccacttcctg agaagagagc atcttatcga agcgcgcttt ctcgacgttg
    22921 aggattttac ccttcagcgg cagaatcgcc tggttcttgc ggttgcgccc ctgcttcgca
    22981 gagccgcccg cggagtcccc ttccaccagg tacagttcgg aaagcgccgg atcgcgttcc
    23041 tggcagtctg ccagtttgcc cggcaggccc gctaagtcga gcgcaccttt acggcgggtc
    23101 atttcacgcg cgcgacgcgc cgcttcacgg gcacgggcag catcgataat tttgccaacc
    23161 acgattttcg cgtcggttgg gttttccagc aggtattctg ccagcagttc gttcatctgc
    23221 tgttcaaccg ccgatttcac ctcagaagaa accagtttgt ctttggtctg ggaggagaat
    23281 ttcgggtccg gcactttcac ggaaacgacc gcaatcaggc cttcacgcgc atcgtcaccg
    23341 gtggcgctga ctttggcttt tttgctgtag ccttctttgt ccatgtaggc gttcagggta
    23401 cgggtcatcg ccgcacggaa gcctgccagg tgagtaccgc cgtcacgctg cggaatgttg
    23461 ttggtaaagc agtagatgtt ttcctggaag ccatcgttcc actgcaacgc cacttcgacg
    23521 ccaataccgt ctttttcagt ggagaagtag aagatattcg ggtggatcgg cgttttgttc
    23581 ttgttcagat attcaacgaa cgccttgatg ccgccttcat agtggaagtg gtcttctttg
    23641 ccgtcgcgct tgtcgcgcag acgaatggaa acgccggagt tgaggaacga caactcacgc
    23701 agacgtttcg ccagaatttc atattcgaac tcggtcacat tggtgaaggt ttcgaggcta
    23761 ggccagaaac gcaccatggt gccggttttt tcagtctcgc cggtaaccgc cagcggggcc
    23821 tgcggtacac cgtgttcgta gatctgacgg tgaattttac cctcgcgctg gataaccagc
    23881 tccagttttt gcgacagggc gtttactacc gaaacaccaa cgccgtgcag accgccggac
    23941 actttatagg agttatcgtc aaatttaccg cctgcgtgca gaacggtcat gatcacttcc
    24001 gccgccgata cgccctcttc cgggtgaata ccggtcggaa tgccgcgccc gtcgtcctgt
    24061 acagagacag agttatcggc gtgaatggtg acgataattt ctttacagtg acccgcgagc
    24121 gcttcgtcga tagcgttatc taccacctcg aataccatgt ggtgcagacc ggtgccgtca
    24181 tccgtgtcgc cgatatacat acccgggcgc ttacgcaccg catccagccc tttcaggact
    24241 ttgatactgg aggagtcata agaattcgac atcaacgttt ctcgctcatt tatacttggg
    24301 ttaatccgtt attttaccct tttccacggt aaacatcttc gaattttcgt ccgacatgtc
    24361 tataacgtgt tcagcactga tcgcgctgac aaagacctgt gattgcgtcg cttttaagcg
    24421 gctggcaagc agcccgcgac gctcatcatc aagctcagag gcaaaatcat ctatcaggta
    24481 gagacaccgc cgcccgcttt cacgggtgag gaactctcct tgcgccagac gtaaggcgca
    24541 catcaacagc ttaagctgcc cacgcgataa ggtatcttcc accggcgcac cgtcggcgcg
    24601 aatgcgtaag tccgctttgt gcgggccgtg cgcggtgtag gttagctggc gatcgcgttc
    24661 aaaattacgt tccagcacct cagcatattc tgtctctttc tcccagccgc gctggaaaga
    24721 gaaagtcaga gaaaactcag ggagaaattg cttacaggta tcagccatat cggccgcgat
    24781 accggcgcta tactccgcgc gccaggtgct gatttgctcc gccagcggga tcagctcttt
    24841 atcccacggg cgtagctgtt cgtaacgtgt cacctggcgc agcgccgcat tgcgctgctt
    24901 gagcaatcgc ttgagattgc tccaggcggt gaaaaatccg ggttcgttgt gaaagcatcc
    24961 ccagtcgagg aatgctcttc tgtatttggg gccgccgttg agtaaagtaa acccttctgg
    25021 cgttatcaac tgcattggca tcaggtgcgc cagttccgcg accttatgtc cgtctgtacc
    25081 gtcgatgcgg actttgctgt cgccctgttt gtctttgatt aagccaatcg ctgtctcgcg
    25141 ctcttcgccc tgtaatcgcc cgtggagaac aaacgcctcc tgctcgtggc gaatgacgcg
    25201 accaatctgc aaactgcgaa acgcccgacc atggccgagc gtatagatgg cttccagcac
    25261 gctggttttg ccactgccgt tggcacctac cagaaagtta aagccgggag ataaagcgag
    25321 atccgcggtt tcgatattgc ggaaatcgcg gatcaacaag cgggtgaggg acattacagt
    25381 ctcattggca tgacaacata ggcagccgac tgtgatgcgg catcttcaat ctgcacgctg
    25441 gaaaccgaat cggtcagcat catgcggacg ttttcgcatt tcagcgcgtt cagaacatcc
    25501 agcacatagc tgacgttgaa gccgatttcc atctccgcac cgctataggt aacgtcgagg
    25561 atctcttccg cttcttcctg ttccgggttg ttggcggtga ttttcagctg gttttcgctg
    25621 acatacaggc gcacgccgcg gaatttctcg ttagaaagaa ttgccgcacg ggcaaacgcc
    25681 tgcttgagca gatcgcagcc agcttccaga tgtttgtccg gattcttcgg cagaacgcgg
    25741 cggtaatccg ggaagcgacc atccaccagt ttggaggtga agataaagtc gccaacgtgg
    25801 gcgcgaatat tgttgctgcc aatctgcacg cgcagcggat tgtcgccgcc gtcgagcata
    25861 cgcatcagtt caatcacgcc tttacgcggt acgatcaccg aatggcttgg caaagattga
    25921 ccaattggca ttgaacagac cgccagacgg tggccgtcgg ttgccacggt gcgcagttct
    25981 tcaccttcgg tttcaaacag cataccattt aagtaatagc gaacgtcctg atgcgccata
    26041 gaaaactggg tcgcttcaat cagacgcttc atcgttgcct gcggcagggt aaattcgact
    26101 tcactctgcc agtcatcgag gttcgggaaa tccgccgctg gcagggtaga cagcgaaaaa
    26161 cggctacgcc cggagcgtac cagcatccgt tcaccttcca gctgcacggc aatttccgcg
    26221 ccttcaggca gaccacggca gatatcaaag aatttgcgcg ccggaacggt cgtcgctcct
    26281 ggctcgtgtg gctgaaccag cgcaacgcgt gccaccattt ccatctcgag atcagtaccg
    26341 gtcagcgaca acgtaccgtc agcaacctgt aacagcagat taccgagaat cggtagcgta
    26401 ggacgaccac ctaacggccc gctcacctgt tgtagcggtt ttaataaatg ctcacgttct
    26461 acggtaaatt tcataggttt acgatgacaa tgttctgatt aaattggaaa aatcttcttt
    26521 gatatcgtgg ctctcttcac gcagctgctc gatcttacgg caggcatgaa gcaccgtcgt
    26581 gtggtcacga ccaccaaacg catcgccaat ctccggcaga ctgtggttag tcagctcttt
    26641 cgccagcgcc atcgccatct ggcgcggacg cgccaccgag cgggatcgac gcttggaaag
    26701 gagatccgcg actttgatct tgtagtactc cgccaccgtc ttttgaatat tgtcgatggt
    26761 gaccagtttt tcctgcaatg ccagcaagtc gcgcagcgcc tcacgcacga agtcgatagt
    26821 gatcgcccgt ccggtaaagt tagcgttagc aataacgcgg ttcagcgcgc cttccagctc
    26881 acgtacgtta gatcgtagac gcttggcgat aaagaacgcc acttcgcccg gcaaacgaat
    26941 gtcgttttcg tcggcctttt tcatcaggat cgccacgcgg gtttccagct ctggcggttc
    27001 gatcgccact gtcagtcccc agccgaagcg ggatttcaaa cgatcctcaa cgccgttgat
    27061 ctctttcgga tagcgatccg aggtgagaat gatctgttga ttaccttcca gcagggcgtt
    27121 gaaggtgtgg aaaaactctt cctgagatcg ttctttatta gcaaaaaact gaatatcgtc
    27181 gatcagtaat gcatctacgg aacggtagta gcgtttaaac tcttcgatcg cgttgttttg
    27241 cagggctttt accatgtcct gaacaaagcg ctcggagtgc atataaacca ctttggcatt
    27301 cggcttgcgc gccataatgc cgttacccac cgcatgcagc aggtgagttt tacccagacc
    27361 cgtgccgcca taaaggaaca acgggttata ggcaccgcca gggttatccg ccacctggcg
    27421 agccgccgcg cgcgccagtt ggttagattt accttcgacg aagttatcaa acgtgtgttt
    27481 gacgtttacg ttagaacgat aggtcggttc tgccggggcc gggacgttat cccaacctga
    27541 gcgcgtagaa ggcgcagcac gttgcggctg cgtttgcgcc acctgtgcag gggccgcgac
    27601 gttgctcgtc actgccgctt gtggcgtttg cgtcaccggt ttggtgccga cttcaaaacg
    27661 cagctgtggg gcatccgctc cgcagaaact ggttagcagt ccattgatat tattaaggta
    27721 cttgtcccgt acccaatcga ggacaaaacg gtttggcgcg tacagggcca gcgtgttatc
    27781 gctcagttcc gcctgcaatg ggcgtatcca catactgaat tctgtggctg gtaactcatc
    27841 ctgcaatcgg gcaagacact gctgccaaag cgaaagtgac acggcggact ccactcgaac
    27901 aaaagtcgat aatgactaag gctgaaacat tcatgattgt tgacgtacgt cgaaaagacc
    27961 ctgcttgagg gtgacgcacg aaccgctgtc tgcggttata tgcccgatca agatcctgca
    28021 aaacgatcgg gaccgcggat catagcctaa actgcgcaag agatcttctg tttctcacag
    28081 attttcccga tttatccaca ggatgatcca gaactcgcta agtgtaaacg atcctgccgc
    28141 gaggcgggca cgatttacgc cgcatattgg aaaatttaat gaccatagac aaaaattggc
    28201 ttaatcgatc taataaagat ccaggacgat ccttgcgctt tacccgtcag cccgtataat
    28261 cctccacccg gcgcgccatg ctggttttca ctggtgtgag gtcgtacatt ttccctgcga
    28321 aaaggtgcgg aaaagcgcgg taaataagga aagagaattg actccggagt gtacaattat
    28381 tacaatccgg cctctttaat cacccatggc ttcggtgtcc atcgtttcat ttttcggcgg
    28441 atatccaata aagccattga atttattcaa gtttaggtag aaatcgccat gaaacgcact
    28501 tttcaaccgt ctgtactgaa gcgcaaccgt tctcacggct tccgtgctcg tatggctact
    28561 aaaaatggtc gtcaggttct ggcacgtcgt cgtgctaaag gccgcgctcg tctgaccgtt
    28621 tctaagtaat aaagctaacc cctgagtggt taagctcgca tttcccaggg agttacgctt
    28681 gttaactccc agtcaattca cattcgtctt ccagcagcca caacgggctg gcacgccgca
    28741 aattaccatt ctcggccgcc tgaattcgct ggggcatccc cgtatcggtc ttacagtcgc
    28801 caagaaaaac gttcgacgcg cccatgaacg caatcggatt aaacgtctga cgcgtgaaag
    28861 cttccgtctg cgccaacatg aactcccggc tatggatttc gtggtggtgg cgaaaaaagg
    28921 ggttgccgac ctcgataacc gtgctctctc ggaagcgttg gaaaaattat ggcgccgcca
    28981 ctgtcgcctg gctcgcgggt cctgatagcc ctcattcggg tctatcaacg cctgattagt
    29041 ccgctactcg ggccgcattg tcgtttcact ccaacctgtt caagctacgg aattgaggca
    29101 ttgcgcaggt ttggagtgat aaaaggcagt tggttgacgg tgaaacgcgt attaaaatgc
    29161 caccctttac accctggtgg tgacgatccc gtcccgcccg gaccatttga taccagagaa
    29221 cactaacgat ggattcgcaa cgcaatcttt tagtcatcgc tttgctgttc gtgtctttca
    29281 tgatctggca agcctgggag caggataaaa acccgcaacc tcaggcccaa cagaccacgc
    29341 agacaacgac caccgcagcg ggtagcgccg ccgaccaggg cgtaccggcc agtggccagg
    29401 ggaaactgat ctcggttaag accgacgtgc ttgatctgac catcaacacc cgtggtggtg
    29461 atgttgagca agctctgctg cctgcttacc cgaaagagct gaactctacc cagccgttcc
    29521 agctgctgga aacttcaccg cagtttattt atcaggcaca gagcggtctg accggtcgtg
    29581 atggcccgga taacccggct aacggcccgc gtccgctgta taacgttgaa aaagacgctt
    29641 atgtgctggc tgaaggtcaa aacgaactgc aggtgccgat gacgtatacc gacgcggcag
    29701 gcaacacgtt taccaaaacg tttgtcctga aacgtggtga ttacgctgtc aacgtcaact
    29761 acaacgtgca gaacgctggc gagaaaccgc tggaaatctc ctcgtttggt cagttgaagc
    29821 aatccatcac tctgccaccg catctcgata ccggaagcag caacttcgca ctgcacacct
    29881 tccgtggcgc ggcgtactcc acgcctgacg agaagtatga gaaatacaag ttcgatacca
    29941 ttgccgataa cgaaaacctg aacatctctt cgaaaggtgg ttgggtggcg atgctgcaac
    30001 agtatttcgc gacggcatgg atcccgcata acgacggtac caacaacttc tataccgcta
    30061 atctgggtaa cggcatcgcc gctatcggct ataaatctca gccggtactg gttcagcctg
    30121 gtcagactgg cgcgatgaac agcaccctgt gggttggccc ggaaatccag gacaaaatgg
    30181 caactgttgc tccgcacctg gatctgaccg ttgattacgg ttggttgtgg ttcatctctc
    30241 agccgctgtt caaactgctg aaatggatcc atagctttgt gggtaactgg ggcttctcca
    30301 ttatcatcat cacctttatc gttcgtggca tcatgtaccc gctgaccaaa gcgcagtaca
    30361 cctccatggc gaagatgcgt atgctgcagc cgaagattca ggcaatgcgt gagcgtctgg
    30421 gcgatgacaa acagcgtatc agtcaggaaa tgatggcgct gtacaaagct gagaaggtta
    30481 acccgctggg cggctgcttc ccgctgctga tccagatgcc aatcttcctg gcgttgtact
    30541 acatgctgat gggttccgtt gaactgcgtc aggcaccgtt tgcactgtgg atccacgacc
    30601 tgtcggcaca ggacccgtac tacatcctgc cgatcctgat gggcgtaacg atgttcttca
    30661 ttcagaagat gtcgccgacc actgtgaccg acccgatgca gcagaagatc atgaccttta
    30721 tgccggtcat cttcaccgtg ttcttcctgt ggttcccgtc aggtctggtg ctgtactata
    30781 tcgtcagcaa cctggtaacc attattcagc agcagctgat ttaccgtggt ctggaaaaac
    30841 gtggcctgca tagccgcgag aagaaaaaat cctgattcgg tgagttttcg ctaaaataag
    30901 ggcggtcagt tgaccgcctt ttttcttttc gtagggcgga taagcaccgc gcatccgcca
    30961 cacaaagcaa caggaacatc atgagcgata atgacactat cgtagcccag gccacgcctc
    31021 cgggacgtgg cggcgttggc atcctgcgca tctccggcct caaagcccgt gaagttgccg
    31081 aaaccgtgct gggtaaactg cctaagccgc gctacgccga ttatcttccg tttaaagacg
    31141 ccgacggcag cgtgctcgat caggggattg cgctatggtt ccctggcccg aactcgttca
    31201 ccggcgaaga tgtgctggaa cttcagggtc atggcggtcc ggtgatcctc gacctgctgt
    31261 taaaacgcat tctgaccatt cccggcctgc ggattgctcg ccctggtgag ttttccgaac
    31321 gcgcgtttct taacgataaa ctcgacttag cccaggccga ggcgattgcc gatcttatcg
    31381 acgccagttc ggaacaggcg gcccgctcgg cacttaactc gctgcaaggc gcattctccg
    31441 ctcgggtcaa ccatttggtg gaagctctca cccacttgcg catttacgtc gaagcggcaa
    31501 ttgatttccc tgatgaagag atcgatttcc tctccgacgg caaaattgaa gctcagctca
    31561 atgacgtgat tgccgatctt gatgcagtgc gtgctgaagc acgtcagggt agtttgttgc
    31621 gcgaagggat gaaagtggtg attgccggac gtcctaacgc cggtaaatcg agcctgttaa
    31681 acgcgctggc gggccgtgaa gcagcaatcg taaccgatat cgcaggaacc acgcgtgacg
    31741 tgctgcgtga gcatatccac attgacggaa tgccgctgca tatcatcgat accgctgggc
    31801 tacgtgaagc cagtgacgaa gtggaacgta ttggtatcga gcgcgcgtgg caggaaattg
    31861 aacaggccga ccgcgtgctg tttatggtcg atggcaccac aacagacgcc gtggatccgg
    31921 cagagatctg gccggaattt atcgcccgtc tgccagcgaa actgccgatc accgtggtgc
    31981 gcaataaagc cgatatcacc ggcgaaacgc tgggaatgag tgaagtgaac ggtcacgcgt
    32041 taattcgtct ctcggcaagg actggtgaag gcgtggacgt gctgcgtaac catctcaaac
    32101 agagcatggg ctttgacacc aacatggaag gcggcttcct ggcgcgtcgt cgccacctac
    32161 aggcgctgga acaggcagcg gaacatctac aacagggcaa agcgcaactg ttgggagcct
    32221 gggcaggtga actgctggcg gaagagttgc gcctggcaca gcagaactta agcgaaatca
    32281 ccggggaatt tacttcagac gacctgctgg ggcggatttt ctccagcttc tgtattggta
    32341 agtaaccgcg cttacgaagc cgtattctga ctgtcagatg cggcttcgct tcattgttag
    32401 cactcctgtt atgcctcaac ccttttttta aacattaaaa ttcttacgta atttataatc
    32461 tttaaaaaaa gcatttaata ctgctccccg aactattgtg attcgattca catttaaaca
    32521 atttcagaat agacaaaaat tctgagtgta ataatgtagc gtcgtgtctt tcgaggataa
    32581 gtgcattatg aatatcttac atatatgtgt gacctcaaaa tggttcaata tcgacaataa
    32641 gattgtcgat caccgccctt aatttaccct tctgtagcca tcaccagagc caaaccgatt
    32701 agattcaatg tgatcgatta gtttgctata tcttaatttt gccttttgca aaggccatct
    32761 ctcgtttatt tacttatttt agtaaatgat ggtgcttgta tatatacata gcgaattaat
    32821 ggatattgca gatgtaatat tcacagggat cactgtaatt aaaataaatg aaggattatg
    32881 taatggaaaa ctttaaacat ctccctgaac cgttccgcat tcgtgttatt gagccagtaa
    32941 aacgtactac tcgcgcttat cgtgaagaag caattattaa atccggtatg aacccgttcc
    33001 tgctggatag cgaagatgtg tttatcgatt tactgaccga cagcggcacc ggggcggtaa
    33061 cccaaagtat gcaggcagcg atgatgcgcg gcgacgaagc ctacagcggc agccgcagct
    33121 actatgcgtt agccgagtca gtgaaaaata tctttggtta tcaatatact attccgactc
    33181 accagggccg tggcgcagag caaatctata ttccggtact gattaaaaaa cgcgagcagg
    33241 aaaaaggcct ggatcgcagc aaaatggtgg cattctctaa ctatttcttt gataccacgc
    33301 agggccatag ccagattaac ggctgtaccg tgcgtaacgt ctatatcaaa gaagccttcg
    33361 atacgggcgt gcgttacgac tttaaaggca actttgacct cgaaggatta gaacgcggta
    33421 ttgaagaagt tggcccgaat aacgtgccgt atatcgttgc aaccatcacc agtaactctg
    33481 caggtggtca gccggtttca ctggcaaact taaaagcgat gtacagcatc gcgaagaaat
    33541 acgatattcc ggtggtaatg gactccgcac gctttgctga aaacgcctat ttcatcaagc
    33601 agcgtgaagc agaatacaaa gactggacca tcgagcagat cacccgcgaa acctacaaat
    33661 atgccgatat gctggcgatg tccgccaaga aagatgcgat ggtgccgatg ggcggcttgc
    33721 tgtgcatgaa agacgacagc ttctttgatg tgtacaccga gtgcagaacc ctttgcgtgg
    33781 tgcaggaagg cttcccgaca tatggcggcc tggaaggcgg cgcgatggag cgtctggcgg
    33841 taggtctgta tgacggcatg aatctcgact ggctggctta tcgtatcgcg caggtacagt
    33901 atctggtcga tggtctggaa gagattggcg ttgtctgcca gcaggcgggc ggtcacgcgg
    33961 cattcgttga tgccggtaaa ctgctgccgc atatcccggc agaccagttc ccggcacagg
    34021 cgctggcgtg cgagctgtat aaagtcgccg gtatccgtgc ggtagaaatt ggctctttcc
    34081 tgttaggccg cgatccgaaa accggtaaac aactgccatg cccggctgaa ctgctgcgtt
    34141 taaccattcc gcgcgcaaca tatactcaaa cacatatgga cttcattatt gaagccttta
    34201 aacatgtgaa agagaacgcg gcgaatatta aaggattaac ctttacctac gaaccaaaag
    34261 tattgcgtca cttcaccgca aaactgaaag aagtttaatt aatactacag agtggctata
    34321 aggatgttag ccactctctt accctacatc ctcaataaca aaaatagcct tcctctaaag
    34381 gtggcatcat gactgatcaa gctgaaaaaa agcactctgc attttggggt gttatggtta
    34441 tagcaggtac agtaatcggt ggaggtatgt ttgctttacc tgttgatctt gccggtgcct
    34501 ggtttttctg gggtgccttt atccttatca ttgcctggtt ttcaatgctt cattccgggt
    34561 tgttgttatt agaagcaaat ttaaattatc ccgtcggctc cagttttaac accatcacca
    34621 aagatttaat cggtaacacc tggaacatta tcagcggtat taccgttgcc ttcgttctct
    34681 atatcctcac ttatgcctat atctctgcta atggtgcgat cattagtgaa acgatatcaa
    34741 tgaatttggg ctatcacgct aatccgcgta ttgtcgggat ctgcacagca attttcgttg
    34801 ccagcgtatt gtggataagt tcgttagccg ccagtcgtat tacctcgttg ttcctcgggt
    34861 tgaagattat ctcctttgtg atcgtgtttg gttctttctt cttccaggtc gattactcaa
    34921 ttctgcgcga tgccaccagc accactgcgg gaacatctta tttcccgtat atctttatgg
    34981 ctttgccggt gtgtctggcg tcatttggtt tccacggcaa tattcccagc ctgattattt
    35041 gctatggaaa acgcaaagat aagttaatca aaagcgtggt atttggttcg ctgctggcgc
    35101 tggtgattta tctattctgg ctctattgca cgatggggaa tattccgcgc gaaagcttta
    35161 aggcgataat ctcctcaggc ggcaacgttg attcgctggt caaatcgttc ctcggcacca
    35221 aacagcacgg cattatcgag ttttgcctgc tggtgttctc caacttagct gttgccagtt
    35281 cgttctttgg tgtcacgctg gggttgttcg attatctggc ggatctgttt aagattgata
    35341 actcccacgg cgggcgtttc aaaaccgtgc tgttaacctt cctgccaccc gcgttgttgt
    35401 atctcgtctt cccgaatggc tttatttacg ggatcggcgg tgccgggctg tgcgccacca
    35461 tctgggcggt cattattccc gcagtgctgg caatcaaagc tcgcaagaag tttcccaatc
    35521 agatgttcac ggtctggggc ggcaatctta ttccggcgat tgtcattctc tttggtataa
    35581 ccgtaatttt atgctggttc ggtaacgtct ttaacatgtt acctaaattt ggctgatccc
    35641 ttcaagaagc cagccatttc gctggcttct tgcctgtcag gaaatctctt ttgtccaaat
    35701 ggcaactcgc ctgattctcc ttcaccacgt atgctttgcg tcaccttact atcaggacgc
    35761 tttaacccat gtcccgcttt ttaatttgta gttttgccct ggttttactt tatcccgccg
    35821 ggattgatat gtacctcgtt ggtttaccgc gtatcgccgc cgatctcaat gccagcgaag
    35881 cgcagttgca tattgcgttc tccgtatatc tggcggggat ggcaactgcg atgctatttg
    35941 ccggtaaagt ggccgatcgt tcagggagaa agccggtcgc catacccggc gcggcgctat
    36001 ttattattgc ctcggtgttc tgttcactgg ctgaaaccag cacgttattt cttgcaggcc
    36061 gatttctaca ggggttgggc gcgggctgtt gttacgtggt ggcgttcgcc attttgcgcg
    36121 acacgctgga tgatcgacgt cgggctaaag tgctgtcatt actcaacggt attacctgca
    36181 tcattccggt gttagcgcca gtgctcggac atctgattat gcttaaattc ccgtggcaga
    36241 gtctgttctg ggcgatggca atgatgggca tcgcggtact gatgttgtct ttgtttattt
    36301 taaaagaaac gcgcccagcg tcccccgctg cttcggacaa accacgagaa aatagcgagt
    36361 cgctgcttaa tcggtttttc ctcagccgtg ttgttatcac caccctcagc gtttcggtga
    36421 tcctcacttt cgtcaataca tcgccggtat tgctgatgga aatcatgggt tttgagcgcg
    36481 gagaatacgc caccattatg gcgctgaccg ctggcgtcag catgaccgtt tcattctcga
    36541 cgccatttgc gctgggaatc tttaagccac gtacgttgat gatcacttcg cagatgttat
    36601 tcctagcggc ggggatcacc cttgccgttt caccttccca tgcgatttct ctgtttggta
    36661 tcacgctgat ttgcgccggt ttctcggtag gttttggtgt ggcgatgagt caggcgttag
    36721 gaccattttc attacgcgcg ggcgtagcca gctcgacctt aggtattgcg caggtttgcg
    36781 gttcgtcact gtggatttgg ctggcagcgg tggttggtat tggcgcatgg aatatgctga
    36841 tcgggattct gattgcctgt agcatagtga gcctgttgct gattatgttc gtcgcgcctg
    36901 gacgccccgt tgccactcat gaagaaatcc atcaccacgc ttgatctcaa tttgctgctc
    36961 tgtctgcaac tgctgatgca ggagcgcagc gtgaccaaag cggcgaagcg gatgaacgtg
    37021 accccttcgg cggtgagtaa gtcgctggca aagttaagag cgtggtttga cgacccgctc
    37081 tttgtgaact caccgctggg gctgtcgccc acaccgctaa tggtcagcat ggagcaaaat
    37141 ctggcggaat ggatgcaaat gagcaatctg ctgctggata aaccgcacca ccagacaccg
    37201 cgcggcctga agtttgagtt ggcggcggaa tcgccgctga tgatgatcat gcttaatgcg
    37261 ctgtcgaaac ggatctacca acgttacccg caggcgacca tcaaactacg taactgggat
    37321 tacgattcct tagatgccat tactcgtggt gaagtggata ttggtttttc cggtcgcgaa
    37381 agccatcctc gctcgcggga gctgttaagc tcgctaccgt tagccattga ttatgaagtg
    37441 ctgtttagtg atgtgccctg cgtctggtta cgcaaagatc atccggcact gcatgaaacg
    37501 tggagtctgg acactttttt gcgttatccg catatcagca tttgctggga acagagcgat
    37561 acctgggcgc tggacaatgt gttacaggag ctagggcgcg aacgcacgat tgctatgagc
    37621 ctgccggaat tcgagcagtc actgtttatg gcagcgcagc ccgacaatct gctactggcg
    37681 accgcaccgc gctactgtca gtactacaat caactccacc aactgccgtt ggttgctctt
    37741 cctctcccgt ttgacgaaag ccagcaaaaa aagctggaag tcccttttac cctgctgtgg
    37801 cataaacgga acagccataa tccgaagatc gtctggttac gggaaaccat taaaaatctt
    37861 tacgcgtcga tggcataacc gaatcgtatg aaacgcgacc ctatttcaca ataaaatgta
    37921 aaaattttgt aataaacttg tctgaatcga acttttagcc gctttagtct gtccatcatt
    37981 ccagtaaatg attactcttg tattcataat ggaccattaa gcatggagcg aaaaatggcg
    38041 actcactttg cccgagggat tttaacggaa ggacatctga tttctgttcg tctcccctcc
    38101 cagtgtcatc aagaagcccg aaacattccc cctcatcgtc aaagccgttt tctggcgtcc
    38161 agaggtttac tcgcagaact gatgttcatg ctgtatggca ttggcgaatt gccggaaatc
    38221 gtcaccctgc cgaaaggtaa accggttttc agcgataaaa atttgccttc gttttctatt
    38281 tcctatgccg ggaatatggt tggcgtggcg ttaacaaccg aaggtgaatg tggcctcgat
    38341 atggaactac agcgtgcgac gcgcgggttt catagcccac acgcgcccga taaccacacc
    38401 ttttccagca atgaatcgct atggatcagt aaacaaaacg atcataacga agcgcgggcg
    38461 cagctcatca cgctgcgccg aagcgtgcta aaactaaccg gtgatgtttt gaatgacgat
    38521 ccgcgcgatc tgcagctgct gcccattgcc ggacgcctga aatgtgctca tgtaaatcat
    38581 gtagaagcgt tatgcgacgc ggaagacgtg ctggtgtggt ccgtggcggt cacgcccacg
    38641 attgaaaagc tcagtgtctg ggagttagat ggcaaacacg gctggaaaag cctgccggat
    38701 attcacagcc gcgccaacaa tcctaccagc cggatgatgc gttttgccca gctctctacc
    38761 gtgaaggctt tttcgccaaa ttgatagaca accacaggag tcatcatgtc tgaaaaattg
    38821 aaggtggtta cgttactggg gagcctgcgc aaaggctcat ttaatggcat ggttgcacgt
    38881 accctgccga aaattgctcc ggcgagcatg gaagtcaatg cgttaccttc cattgccgac
    38941 attcccttgt atgacgctga cgtacagcag gaagaaggtt ttccagcaac ggttgaagct
    39001 ctggcggaac agatccgtca ggctgacggt gtggtgatcg tcacgccgga atataactac
    39061 tcggtaccgg gtgggctgaa aaatgccatc gactggcttt cccgcctgcc ggatcaaccg
    39121 ctggcaggta aaccggtgtt gattcagacc agctcaatgg gcgtgattgg cggcgcgcgc
    39181 tgtcagtatc acctgcgcca gattctggtt ttcctcgatg caatggtgat gaacaagccg
    39241 gaatttatgg gcggcgtgat tcagaacaaa gttgatccgc aaaccggaga agtgattgat
    39301 cagggtacgc tggaccacct gaccgggcaa ttgaccgcat ttggtgagtt tattcagcga
    39361 gttaagatct aaataaaaaa cccgccagca atcatgcatg gcggtttttt aacgcgctat
    39421 cgattttagt gagcgtcgat aaagacaatc ttcaggataa acagcagcgc aacgatgatt
    39481 acgcacgggc ttagatcacg cagacgtccg gtaccgattt tcatcacgca gtaggagata
    39541 aagcccagcg cgataccttc ggtaatcgag aagctgaacg gcatcatcac ggcggtaata
    39601 aacgccggaa cagattcagt aagatcctgc cagttcacgc gtgccagact ggaagtcatc
    39661 agcacgccaa cgtaaatcag cgcaccagct gcagcgtagc ctggcaccat ccccgccagc
    39721 ggcgacagaa agataaccag caggaacagc agaccaacaa cgactgccgt cagaccggta
    39781 cgaccaccaa cggaaacgcc ggaagaagac tcgatatacg ccgtaacaga agaagtaccg
    39841 ataaacgaac cggtcaccga agagatactg tcgacatata gcgcctgctt catgcgcggg
    39901 aatttaccct tctcatccgc cagacctgct ttatcggtca cgccaatcag cgtaccggag
    39961 gagtcaaaca ggttgaccag catgaaagag aaaatcaccc ctgccaggcc gaggttaaac
    40021 gaaccggcta aatctacatg acccacgaca gtcattacgc tcggcggcgc agaaacgatg
    40081 ccattatagt ggacatcacc cagcatccag cccagcagcg ttgtcaccac gatggaaacc
    40141 agcaccgccg cgtgaatgtt gcgcgaggcc agaatggcga tgatgaagaa gccgaggatc
    40201 cccagcagca cgctgtgaga agtcagatta ccgatgctga ccagcgtttc cgggttagcg
    40261 acaatcacac ctgcgttttt cagccccatc atgccaatga acagaccgat accgctggta
    40321 atacccacac gcagactcac cggaatgttg gctatcatcc agtagcgaac gcggaaaatc
    40381 gtcagtaaca gcagacctat cgcgccccag aagattgcgc ccatcccgac ctgccacggc
    40441 aagcccatcg cctgtacaac gacaaaagcg aagaacgcat tcaggcccat agcgggtgcc
    40501 agtgcaactg gcaggttagc aaacagtccc atcataatac tgccgaatgc agcgatcaga
    40561 caggtagtga cgaagacggc gctggtatcc atgccagcaa cgccaagaat ttgcgggtta
    40621 acaaaaacga tgtaaaccat cgtcaggaag gtggtaaaac cggcgatcac ttcggtccgt
    40681 gccgtcgtgc catgttcgcg cagtttaaac acgcgttcca gcatcccctg gccagaagcc
    40741 tgggttgtgt gttgttgact cattatctat ttccgaacaa ggagggaaaa tccgtcgcta
    40801 tcgtatacca aaatgagaca atatggacgg ctgaagataa ctttttttca ttgtatttgc
    40861 ttatacggca acgattgcgt catgcgattt ggcatgacga aaacgttaaa ctaacgataa
    40921 aggaaagaca tgtcccagat agaagcggta tttttcgact gcgacggtac gctggtcgat
    40981 aacgaggcca tttgctctcg cgcctatgtc acgatgttca gggaatttgg cattaacgtt
    41041 gacctggagg agatttttac ccgttttaaa ggcgtaaaac tctacgaaat catcgacata
    41101 atcagtaaag aacagggcgt gacgatggtc caggccgatg ccgagcacgt ttaccgcgca
    41161 gaagtagcac gtctgtttga taccgaactt gcggacatcg caggagcgaa cgaattgctg
    41221 gcaagcatta acgtgccgat gtgcgtcgtc tctaacggtc cggtcagcaa aatgcagcat
    41281 tcgctgggta agctcaacat gctgcactac ttcccggaaa aactgttcag cggctacgat
    41341 atccagcgtt ggaagcccga tccggcatta atgttccatg cggcaaaagc gatgaatgtg
    41401 aacgttgaaa actgcattct ggtcgatgac tccagcgctg gtgcgcaatc agggatagat
    41461 gccggaatgg aagtgtttta cttctgcgct gacccgcaca ataaaccgat cgttcacccg
    41521 aaagtcacca cctttaccga gctgtcgcag ctgcctgcgc tctggaaggc acgcggctgg
    41581 aatataacgc gataatcgcc tccttacttc aacacttaca catcaggcac gctggtttga
    41641 gataaagaat accaggtgtc tgatgagtaa gcgtctattc cctatgaata atttatgtcg
    41701 ttattcgtcc tgtcatcctc cctctgcata gttaagcctt agttatattt ttcacaatat
    41761 cgggataccg tttgaaccaa tccagaatat tacgcatcgc gtcactgatg tttttatcag
    41821 ctttatattg attctcaagt ctattatttc gaacaatagt aagattagaa cgtatcttat
    41881 cgtcacattc gacaatcttc gcatccaatg catttacttc atcctgtact tctttactat
    41941 tccaattgtc ccttttgtta tcaaataaag cccttttatc atctactgat ttatcacggc
    42001 ttatggttga ctctttaatt tctcgcaata agtcatcgta atctttaatg gaagctttta
    42061 tttcctgata gttttttagt aaatcctgcc tgttaattgc aaatgcactg gataaatatt
    42121 gaaaatcgcg agcaaactta ttgagttctg agtcgtaata tgctttgaaa tttttatatt
    42181 ttccaattgg atttttagcg cttcaatttg ttgtttttca acatccttaa aaagggaggc
    42241 aaggtcacca taattcattt tataatcaat atcaaattgg ttatgagact cttgcttttt
    42301 ttgtcgaata aatttggctg aatcatcagt agacatcttt atatctgccg atggaatgat
    42361 ttcctttatg atagattcaa taaacttaat tcggtcactt gctatcatat tggtaatgat
    42421 attttgtgct ttatccttca tacctttgaa aataaaaaac tcagctctac cattattaaa
    42481 atgatatttc tcttggtacg atttattttc aacataaagt gtagacaaaa acgtctctag
    42541 ctctgaaaat gcgttattat attcttcctt aatctttgtc tcagtattat aaaaatcttt
    42601 tatatcgcta ttgatagcat ttaccttttc taagaaatta ggtattttgt ctttacttat
    42661 agctccgtcc agattcatat aaatgtattt tatcggtgta acaccatctt ctaaataaat
    42721 tgaatctgga tcaatagaac agtctttgca ccaatcttct ctgtaataat tgtctaaatt
    42781 ggcactccgc aaatcacaat aattaaagga gatattatca ttctctgaat tctgcttgct
    42841 aaatgaagtt ttaatagcct tctcgatatt ccctacgcac ttagaaaaat tatcatccaa
    42901 cttaagagtt ctcgatcttc tttcaatgta atcagaaaaa tactcttctg ggttaaactt
    42961 atattcatcg gaactcgcat taccaagact acacttcata ttaatactat tcaaattaca
    43021 ataattaaac acagttccct gatcctgctc ccaagtttcg ttatcaccag acttatagaa
    43081 tgcgtttgct aaaaaatcca ttctatgagc atcaagtcct gctatattac agttataaaa
    43141 atgacttaaa agtatactcg aatctggaca atatccaccc tgaattatgc aatcatgaac
    43201 aaaagactgc ataaacagat atgcaccaac cagcttaccc acattcgggt cttgatttac
    43261 agagtatatc tttgatgtat ctatgttaaa attttttatt tcacatcaat acagaaaaca
    43321 ctctttaaac acgccgtaaa taggtatttc attatttggt tttactcgac acctggagct
    43381 aacaagtgac acattctcaa aaatacagcc ctcaaaaaaa caatttccaa atactgaacc
    43441 attaagattt tcgtaagata tagcaccagt gaatttcact tttttaaagt tacaatattt
    43501 tagagatgcc agggcttctt tttccagcgc agataaatcg attgtgatat ttttaaaggg
    43561 gattttattt tttaaatata cgctaagctt ttcattatca tttgggaact gcattttcaa
    43621 catccctgat tgaaaagcct tctgatcaaa atgaatatca tgcttataaa tatccaagct
    43681 gagttcttct gaaaataaag aacgcattgt gtttttttca gcatcattat gatgatcttg
    43741 cgcattaata tttatattaa atactctact aactataatg tctttatttt catctacagt
    43801 aaattctgta gtcgtattaa agcgccattg ttgatcttga tcggcgagag atttaattct
    43861 attaaatata tcaactttat caccagtttc cgtcacgaaa tctataatgg cttgtttagc
    43921 ctccttaata tgatacatgg gaaaaagatc gagtataaat tcccaaagac ttcgtttaag
    43981 aaaagatcga ctatcaccag ctaaaatgtt tgttatatct ttatgagtta ctgaatactt
    44041 atccacatca tcaagaaaca aatcaatttt tcctgaatat ttttgcgttc tatttttttc
    44101 attcagattt tcatctgtca ttttagtcag cgtagaaaaa ttatctgtaa ctgtattata
    44161 tgatgatata gccataatca tttctcctga acacaatatt tattcgcccg agcacaacac
    44221 attgccgatt tgtcttaaaa aagcatactt gggtcttggt ttgctacgat tatgactaaa
    44281 ccacctatga atactgtaaa aaatcgctca ttttttatgt ttcgatatag ggcttttacc
    44341 ctagtttttt gttttctttt ccattctctg tgcaggtagc gatataaatg aaaagaataa
    44401 caaaaatgtt tttatagcgg ggtactacat taaaagcaaa ataattcaaa tgaaataatg
    44461 tatctgcaat gtactgggag agtttcgaga tgagtttgtg tgcagggaga atgtgtatca
    44521 gcccggtaac tatgtatgac cgggctgatt gccagatgcg gcttaaaagc cttatctgac
    44581 atacagttag cgttactctt tcggatcttt ccccgccagc agtttatcga gttcgtcacc
    44641 accgacgtga cggaaatcct gccccttcac gtagtagaag ataaactcac aaatattctg
    44701 gcagcggtcg ccaatacgtt cgatagaacg cgcgcagaac agcgcagtaa gtacgctcgg
    44761 aatggtacgc gaatcttcca tcatgtaggt catcagttga cgaacaatac cttcgtattc
    44821 ctgatcgact tttttatctt cacgataaat acgtaccgct tcgtcaatgt ccatccgcgc
    44881 gaacgcgtcc agcacgtcgt gcagcatctg gatggtatga cggcccagcg actccagact
    44941 taccagcaac ggctgatgct gctgggagaa tttctccagc gcagtacggc agattttgtc
    45001 cgccacgtcg ccaatacgct ccagctcggc aatggtttta ctgatcacca taaccagtcg
    45061 caggtcgctc gccgtcggct gacgtttggc gataatgcgc acgcaggctt catcgatcgc
    45121 cacttccatc atgttgacgt tcttgtcgcc ttcgatcacg cgcttcgcca gatcgctgtc
    45181 ctggttatgc atcgcggtga ttgcatcaga aagctgctgc tccaccatgc cgcccatggt
    45241 catcacctgc gtgcggatac tttccagttc ggcgttgaac tggccggaaa tatgtttatt
    45301 aagattgaga ctgtccataa cgcaatcctg aatcaaccgt aacgaccggt gatgtagtct
    45361 tctgtttgtt tcttcgctgg cttggtgaac agatcgtccg tgttgctgaa ctcaatcaat
    45421 tcgcccaggt acataaacgc cgtgtggtcg gaacaacgcg cagcctgctg catgttgtgg
    45481 gtaacgatca ccacggtgta atcctgcttc agttcggtga tcagctcttc aatacgcccg
    45541 gtagagatgg ggtcgagcgc cgaacacggt tcgtcgagca gcagcacttc cgggcgaatg
    45601 gcgataccac gcgcaataca cagacgctgt tgctgaccac cagagagaga gtaaccgctc
    45661 tggtgcaatt tatctttggt ttcgttccac aatgcggctt tggtcaatgc ccactgcacg
    45721 cgctcgtcca tgtcggcacg ggagagcttc tcaaacagac gaacaccaaa agcgatgttg
    45781 tcgtagatgg acatcgggaa cggcgtcggt ttctggaaca ccatgcccac tttcgcacgc
    45841 agcagtgcga tatcctgaga gttggtcagg atgttgtcgc catcaagcag aatttcacct
    45901 tctgcgcgct gctccggata cagttcaaac attttgttga aggtacgcag cagcgtcgat
    45961 ttaccgcagc cggacggccc gataaacgcc gttacctggt ttttagcgat atccaggttg
    46021 atgtttttca gggcatggaa tttgccgtag tagaagttca aattacgaac ctgaatttta
    46081 ctcggggcag tttcaaccat actcattgca atcttttcct catcgtgcct gatgcacttc
    46141 gctaatcagg cttaccgtag gccggatcag gcgttcacgc cgcatccggc aaagtgttaa
    46201 ccgtgtttat tcttcgcaaa aacaacgcgc gccagaatgt tcagcagcag tacgcacagg
    46261 gtaataatca ataccccggc ccaggccagt tgttgccatt ccgcaaacgg gctcatcgca
    46321 aacttaaaga tcgtcaccag caggttggcg atcggctgca tcatgtccgt gctccagaac
    46381 tggttggaga gcgcggtaaa cagcagcggc gcggtttcac cggcaatacg ggcaatcgcc
    46441 agcaggatac cggtcataat cccggacacc gacgctttca gcgtaatcgc ggagatcatc
    46501 ttccacttcg gtgtacccag cgcataagcc gcttcacgca ggctgtccgg caccagtttc
    46561 agcatgttct cggtggtgcg gataacgatc ggcacctgca acagcgccag cgcaattacg
    46621 cccgcccagc cggagaagtg ctccatctgt gccaccacga tggtgtagac aaacagacca
    46681 accacaatcg acggcgcgga gagcagaatg tcgttaatga agcgaataac ttctgccagc
    46741 caggatttac gaccatattc cgccagataa atccccgcca taatgcccag cggcgtaccg
    46801 aataccgtgg cccacaaaat taacagcccg ctacccgcca gggcgttcgc cagaccacca
    46861 ccttccgtat tgggcggcgg cgtcatttca gtgaacagcg ccagcgacat accgtcgata
    46921 ccgcgagtga tggtggacat taaaatccag atcagccaga acaggccgaa ggccatcgtc
    46981 gccatcgaga gcgtcagcgc aatacggttt ttgaggcggc gacgcgcctg cattttgcgg
    47041 cgagattcag ccagcgccgc agtggtttgc atttcaacca tagccattag cgtgccccct
    47101 cattcttagc caggcgcata atcataaact tcgatgcggc gaggacgatg aaggtaatca
    47161 caaacaggat caggcccagt tccatcagtg cggcaacgtg cagaccggat tccgcttccg
    47221 caaattcgtt cgccagcgca gaggtgatac tattgcccgg catgtacagc gaggcgctgt
    47281 cgagctggta ggtgttaccg atgataaagg tcaccgccat ggtttcaccg agcgcgcggc
    47341 ccagccccag catgatgccg ccgataacac catttttggt gaacggaaga acgatacgcc
    47401 agataacttc ccaggtggtg cagccaatac cgtaggccga ctctttcatc atcaccgggg
    47461 tttgttcgaa cacatcacgc attaccgccg caatgtacgg aataatcatg atggcgagga
    47521 tcacgcctgc cgcgaggata ccgataccaa atgcggggcc agagaacagc gcgccaacaa
    47581 tcgggatatt cgacatgata ttgccgaccg gctcctgaaa gtaaacggcg aacagcggcg
    47641 caaagataaa caggccccac atgccgtaaa cgatacttgg aatggctgcc agcagctcaa
    47701 tggcgatacc cagcgggcgt ttcagccagc caggcgcaag ctcagtcagg aacagggcga
    47761 taccgaaact caccgggacg gcgatcagca gcgcgataaa cgaagtcacc aacgtaccgt
    47821 agatcggcac cagcgccccg tagatatcgt tcggtgcatc ccactctttg gtccatagga
    47881 aagccagacc aaatttctga atgctcggcc aggaggagat gatcagagag acaataatgc
    47941 cacccaacat caatagcaca atcagcgccg ccagttttac cagcacgctg aaaattatgt
    48001 cgcccttttt acccggtggg ttaaaagcag gcttggttgc agccataagt tactcttcag
    48061 ttaaacgcgt ttacaaagtc attttgtaat gccggatgcg gcgtaaaaca ccgtacccgg
    48121 cctggagttt tattagtaca gcggcttacc gctactgtct ttaatattgg tcttccacgc
    48181 agcgcgaacc tgttcaacta cactatccgg caggctggcg taatccaggt cgttcgcctg
    48241 tttagccccg gttttgtacg cccagtcgaa gaatttcagc acttctgtgc cttgttctgg
    48301 tttcttctga tctttgtgga tcagaatgaa cgtggtagag gtaataggcc atgcatcttc
    48361 gcctttctgg ttggtcagat cctgagcgaa ggttttgctc cagtctgcac cttttgctgc
    48421 attagcgaag ttttcttcgg tcggactaac cggtttacca tcaacggaga tcagtttggt
    48481 gtacgccagg ttgttctgct tcgcgtaagc atattcaaca taaccaattg cacccggcag
    48541 acgctgaacg aacgcggcga taccgtcgtt acctttaccg cccagaccga tcggccattt
    48601 tacggtagag ccagtaccaa cgttgttttt ccactcttcg ttcactttcg ccaggtagct
    48661 ggtgaagacg aaggaagtcc cggagccatc tgcgcggcgt actacagcaa tgttttgtga
    48721 aggcagtttc agacccggat tcagtttggc gatggcttca tcatcccact tcttgatttt
    48781 gcccaggtag atgtcgccga gggttttacc atccagcacc agttcgccag acttcagccc
    48841 tggaatgtta accgccagca ccacgccgcc aatcacggtc gggaactgga acagaccttc
    48901 ctgagccagt ttttcgtcag acagcggcgc gtcagaggca ccaaaatcaa cggtattagc
    48961 gataatctgt tttacgccac cggaagaacc gataccctgg tagttaactt tattaccggt
    49021 ttctttctgg taagtgtcag cccatttggc atacaccggc gcagggaagg ttgcacctgc
    49081 acctgtcagg cttgcttctg caaacacaga gaaagcgctc atcgataagg tcgcggcgac
    49141 aacagttgcg acggtggtac gcataacttt cataatgtct cctgggagga ttcataaagc
    49201 attgtttgtt ggctacgaga agcaaaatag gacaaacagg tgacagttat atgtaaggaa
    49261 tatgacattt ttatgacaga aaggaattac caaataactt actgatttta aatgtgaaga
    49321 tgaaaatccc acatgtcatc tttttgtcat gatgcattta aaagtgataa agaaatgggt
    49381 ga
//
LOCUS       DAJVTL010000014        48098 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.014, whole genome shotgun sequence.
ACCESSION   DAJVTL010000014 DAJVTL010000000
VERSION     DAJVTL010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 48098)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48098)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48098
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.014"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..587
                     /locus_tag="OQQ26_000783"
     CDS             <1..587
                     /locus_tag="OQQ26_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000206726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HCS1856347.1"
                     /translation="IKEIKERIGSLDVRDNVERRAYEIALASLEAEPVAWLHSDNGLG
                     IPAITRSKNIADSWLSKGWYVQPLYMAQPVSVVPDALPSLNNGIVGFDEGWNACRAVM
                     LHGAEPVSQTYKLNKLSGNPPVTPDGWISCSERMPEDGQHVIILCDGAFVLYAQYRDG
                     EFFDVVRNGEEFFETQSRNVTHWIPLPEPPQEVN"
     gene            complement(917..1732)
                     /locus_tag="OQQ26_000784"
     CDS             complement(917..1732)
                     /locus_tag="OQQ26_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016570101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856348.1"
                     /translation="MQSEIITQKNGKGIFDRKAWLTESKKLYLSAKLLRSEGERNKKL
                     LRAASKKSPIVHEYIDIASATDQTSRLMLGYAFEMLLKSAILLMNLGARKKAIENEFC
                     NYGHKLDCMAVDLGLPLTVDELKLLKVASRDIVLNARYPIGIVDDNKYITELNERNIQ
                     LADENIFRDMVSLYDKIKSIVAKFDNDVANCANFNMLRLSEFTLFMRNGGGLSSRAIV
                     IFSDKFPEVSKRKSYLKKAIEEHAGKVAFLYTYRWSSFSFFEDTGKKLIPLVE"
     gene            complement(1887..3110)
                     /locus_tag="OQQ26_000785"
     CDS             complement(1887..3110)
                     /locus_tag="OQQ26_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1856349.1"
                     /translation="MALSDAWLRSVVGKERDKVLVKSDRDGLSVRVSPKGRVVFQYRY
                     QWAGKGERLDIGTYPATGLKEAREEVIRLRGELESNRNPRFVKQAEKRKATEAMTVES
                     VIRAWYEAYCVKNKKGSEQILRSFELHLFSKIGNIPHDAATLHDWLEVLEPLSTKTPA
                     IADRLLINAKQAHVWAYKRKLIETRPLSDITGKDMDIRKGQKKRFLTHDEIKILYAAI
                     DGSRMVPKYRAFIKLLLHFGCRSSELITARVDDFDFINKVWTVPPERHKTGEITGEPL
                     KRPIIEPVEELIKNAISMNNGSDMLFTKEGSREPVGRTSLQSLPYNLMQYAWRRLGYQ
                     FPHWSLHDLRRTARTNFSDLTAPHIAEIMLGHKLPGVWQVYDKSDYLEEQRKAYQAWW
                     ERVESIITCASSDPN"
     gene            complement(3496..4173)
                     /gene="yjjG"
                     /locus_tag="OQQ26_000786"
     CDS             complement(3496..4173)
                     /gene="yjjG"
                     /locus_tag="OQQ26_000786"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HCS1856350.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVS
                     LLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYAL
                     EQAGNPDRSRVLMVGDTAESDILGGINAGLVTCWLNAHHREQPEGIAPTWTVSSLHEL
                     EQLLCKH"
     gene            complement(4188..4634)
                     /gene="rimI"
                     /locus_tag="OQQ26_000787"
     CDS             complement(4188..4634)
                     /gene="rimI"
                     /locus_tag="OQQ26_000787"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HCS1856351.1"
                     /translation="MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQ
                     LTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM"
     gene            complement(4603..5016)
                     /gene="holD"
                     /locus_tag="OQQ26_000788"
     CDS             complement(4603..5016)
                     /gene="holD"
                     /locus_tag="OQQ26_000788"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HCS1856352.1"
                     /translation="MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVAN
                     DLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNNWRLGTDEPLSLEGAQ
                     VASPALTELRANPTARAALWQQICTYEHDFFPRND"
     gene            5119..6150
                     /gene="rsmC"
                     /locus_tag="OQQ26_000789"
     CDS             5119..6150
                     /gene="rsmC"
                     /locus_tag="OQQ26_000789"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HCS1856353.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRA
                     HTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLL
                     PVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWG
                     EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDIGCGAGVLSVAFARHS
                     PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
                     TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRA
                     IMTRQAKKG"
     gene            6418..6504
                     /locus_tag="OQQ26_000790"
     tRNA            6418..6504
                     /locus_tag="OQQ26_000790"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6452..6454,aa:Leu,seq:cag)
     gene            6533..6619
                     /locus_tag="OQQ26_000791"
     tRNA            6533..6619
                     /locus_tag="OQQ26_000791"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6567..6569,aa:Leu,seq:cag)
     gene            6654..6740
                     /locus_tag="OQQ26_000792"
     tRNA            6654..6740
                     /locus_tag="OQQ26_000792"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6688..6690,aa:Leu,seq:cag)
     gene            complement(6779..7015)
                     /locus_tag="OQQ26_000793"
     CDS             complement(6779..7015)
                     /locus_tag="OQQ26_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HCS1856354.1"
                     /translation="MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTP
                     VMLYHKQLRHYVLLPSCLALSAGIMLMIMNLNQG"
     gene            7156..7944
                     /gene="fhuF"
                     /locus_tag="OQQ26_000794"
     CDS             7156..7944
                     /gene="fhuF"
                     /locus_tag="OQQ26_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HCS1856355.1"
                     /translation="MAYRSAPLYEDVIWRTHLQPQDAGLAQAVRATIAEHREHLLEFI
                     RLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGL
                     MVPPLMLALLTQEKALDVSPEHFHVEFHETGRAACFWVDVCEDKNATPHSPQQRMETL
                     ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEK
                     TLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            complement(7982..8658)
                     /gene="bglJ"
                     /locus_tag="OQQ26_000795"
                     /pseudo
     CDS             complement(7982..8658)
                     /gene="bglJ"
                     /locus_tag="OQQ26_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418786.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
     gene            complement(8616..9341)
                     /locus_tag="OQQ26_000796"
     CDS             complement(8616..9341)
                     /locus_tag="OQQ26_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCS1856356.1"
                     /translation="MLPGCCKNGIVISKIPVMQAGLKEVMRTHLPEYEIISSASAEDL
                     TLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLM
                     CPTATLLSDVEPIENLVKTVRSSNTHAERISAMLTSPAMNETHDFSYRSVILTLSERK
                     VLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGTRELN
                     LPSVYGDAAEWNTAELRREMSHS"
     gene            9960..10730
                     /locus_tag="OQQ26_000797"
     CDS             9960..10730
                     /locus_tag="OQQ26_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HCS1856357.1"
                     /translation="MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMD
                     SVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV
                     EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAVITFFASTAAMYIRQLLAQ
                     RHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMF
                     KGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV"
     gene            10721..11194
                     /locus_tag="OQQ26_000798"
     CDS             10721..11194
                     /locus_tag="OQQ26_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HCS1856358.1"
                     /translation="MGVIEFLFALAQYMILAAIPAVGFAMVFNVPVRALRWCALLGAI
                     GHGSRMILMTSGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV"
     gene            11302..11841
                     /gene="dnaT"
                     /locus_tag="OQQ26_000799"
     CDS             11302..11841
                     /gene="dnaT"
                     /locus_tag="OQQ26_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HCS1856359.1"
                     /translation="MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYA
                     VTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFI
                     RLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPK
                     RDVNTVSEPDSQIPPGFRG"
     gene            11844..12581
                     /gene="dnaC"
                     /locus_tag="OQQ26_000800"
     CDS             11844..12581
                     /gene="dnaC"
                     /locus_tag="OQQ26_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HCS1856360.1"
                     /translation="MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAAL
                     ERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASF
                     IFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDL
                     SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVM
                     DRMRLGNSLWVIFNWDSYRSRVTGKEY"
     gene            12630..13124
                     /locus_tag="OQQ26_000801"
     CDS             12630..13124
                     /locus_tag="OQQ26_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HCS1856361.1"
                     /translation="MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNS
                     TTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLE
                     KLGLNSEEQKEDTNYQDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGL
                     NFIS"
     gene            13378..15669
                     /gene="opgB"
                     /locus_tag="OQQ26_000802"
     CDS             13378..15669
                     /gene="opgB"
                     /locus_tag="OQQ26_000802"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HCS1856362.1"
                     /translation="MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNIT
                     LFASDYFTGDGINDAVLYTLTNSLTGAGVNKYILPGIGIVLGLTAVFGALGWILRRRR
                     HHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDQDFAAYYKEPSKTIPDP
                     KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLFGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNY
                     LGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
                     LSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITA
                     KAYGNNASRPIPVRIGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVEREG"
     gene            complement(15809..16831)
                     /gene="lgoD"
                     /locus_tag="OQQ26_000803"
     CDS             complement(15809..16831)
                     /gene="lgoD"
                     /locus_tag="OQQ26_000803"
                     /EC_number="1.1.1.414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-galactonate oxidoreductase"
                     /protein_id="HCS1856363.1"
                     /translation="MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDI
                     HAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGR
                     TNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDSQAAALIEPFAISAHAVRRAAI
                     APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELLVLDPSAEDF
                     DAQLRAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELRFSDPEFHK
                     KETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHSYPFATLAETYERDVINNRELI
                     KGVITF"
     gene            16970..17884
                     /locus_tag="OQQ26_000804"
                     /pseudo
     CDS             16970..17884
                     /locus_tag="OQQ26_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026290.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
     gene            18084..19460
                     /locus_tag="OQQ26_000805"
     CDS             18084..19460
                     /locus_tag="OQQ26_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1856364.1"
                     /translation="MQESGAEKENITIVPRSSFTPSSSADIPVPPDGLVQRSTRIKRI
                     QTTAMLLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPC
                     GPLLDRKGPRLMLGLGMFFWSLFQAMSGMVHSFTQFVLVRIGMGIGEAPMNPCGVKVI
                     NDWFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGW
                     YMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTMWGMMLGFSGINY
                     TAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWLVKGGMAPIK
                     SRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMAPFCIHFAGTSCWGLIHVAVASR
                     MTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQ
                     PINDPRKD"
     gene            complement(19509..21161)
                     /gene="tsr"
                     /locus_tag="OQQ26_000806"
     CDS             complement(19509..21161)
                     /gene="tsr"
                     /locus_tag="OQQ26_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HCS1856365.1"
                     /translation="MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQ
                     TIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAE
                     KNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQ
                     DGFEKQYVAYMEQNDRLYDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASL
                     VAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRYMQGELMRTVGDVRNGANA
                     IYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
                     ETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVT
                     RVTDIMGEIASASDEQSRGIDQVGLAVAGMDRVTQQNAALVEESAAAAALEEQASRLT
                     EAVAVFRIQQQQRETSAVVKNVTPATPRKMAVADSGENWETF"
     gene            complement(21280..21726)
                     /gene="hpaR"
                     /locus_tag="OQQ26_000807"
     CDS             complement(21280..21726)
                     /gene="hpaR"
                     /locus_tag="OQQ26_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HCS1856366.1"
                     /translation="MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESP
                     SMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRA
                     QTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEAIPGDNE"
     gene            21998..23287
                     /locus_tag="OQQ26_000808"
     CDS             21998..23287
                     /locus_tag="OQQ26_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
                     /protein_id="HCS1856367.1"
                     /translation="MKGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNT
                     VIGCGEPIPFPQSEKVLSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESF
                     YRPAIKAKCRDGFCPIGETVALSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSAL
                     SEFATLNPGDAILLGTPQARVEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTL
                     PHPHGTLFALGLNYADHASELEFKPPEEPLVFLKASNTLTGDNQTSVRPNNIEYMHYE
                     AELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLRIKSRDGLTPML
                     STIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIA
                     TGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSEDTAK"
     gene            23284..24750
                     /gene="hpaE"
                     /locus_tag="OQQ26_000809"
     CDS             23284..24750
                     /gene="hpaE"
                     /locus_tag="OQQ26_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate semialdehyde
                     dehydrogenase"
                     /protein_id="HCS1856368.1"
                     /translation="MKKVNHWINGKNVAGNDYFQTTNPATGEVLADVASGGEAEINQA
                     VAAAKEAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIP
                     RASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATRKVAP
                     CLALGNTAVLKMSELSPLTADRLGELVLEAGIPAGVLNVVQGYGATAGDALVRHHDVR
                     AVSFTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFEDADIERALDAALFTIFSINGE
                     RCTAGSRIFIQQSIYPEFVKRFAERANRLRVGNPNDPNTQVGALISQQHWEKVSGYIR
                     LGIEEGATLLAGGPDKPSDLPAHLKGGNFLRPTVLADVDNRMRVAQEEIFGPVACLLP
                     FKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGG
                     VKASGTWREGGEYSFEVFAEMKNVCISMGDHPIPKWGV"
     gene            24752..25546
                     /gene="hpaD"
                     /locus_tag="OQQ26_000810"
     CDS             24752..25546
                     /gene="hpaD"
                     /locus_tag="OQQ26_000810"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HCS1856369.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLI
                     ADEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSHKL
                     GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWRE
                     GQFKEFCNMLLGMLGWDKYDGKVEFITELFPSSGTGQVNAVFPLPA"
     gene            25556..25936
                     /locus_tag="OQQ26_000811"
     CDS             25556..25936
                     /locus_tag="OQQ26_000811"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HCS1856370.1"
                     /translation="MPHFIVECTENIREEARLPELFASVNTALAATGIFPLGGIRSRA
                     HWIDTWQMADGKHDYAFVHMTLKIGSGRSLESRQEVGEMLFDLIKTYFASLMESRYLA
                     LSFEIAELHPTLNFKQNNVHALFK"
     gene            26004..26807
                     /gene="hpaH"
                     /locus_tag="OQQ26_000812"
     CDS             26004..26807
                     /gene="hpaH"
                     /locus_tag="OQQ26_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HCS1856371.1"
                     /translation="MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQR
                     EWVRLKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIV
                     PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWL
                     ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGSISCRFV"
     gene            26818..27606
                     /gene="hpaI"
                     /locus_tag="OQQ26_000813"
     CDS             26818..27606
                     /gene="hpaI"
                     /locus_tag="OQQ26_000813"
                     /EC_number="4.1.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxoheptanedioate aldolase"
                     /protein_id="HCS1856372.1"
                     /translation="MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGE
                     HAPNNVQTVLTQLQAIAPYPSQPIVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAR
                     EAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI
                     LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIREAGKAPGILIANEQL
                     AKRYLELGALFVAVGVDTTLLARAAEALAARFGAQATAIKPGVY"
     gene            27781..29157
                     /gene="hpaX"
                     /locus_tag="OQQ26_000814"
     CDS             27781..29157
                     /gene="hpaX"
                     /locus_tag="OQQ26_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HCS1856373.1"
                     /translation="MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGRDLGLSATMFGLATTLFYAAYIIFGIPSNIMLSIVGARRW
                     IATIMVLWGIASTATMFATGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARA
                     NALFMVAMPVTTALGSIVSGYILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDD
                     SPDKAKWLTKEDKKCLQEMMDNDRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTL
                     AYFCLTNTLSAISIWTPQILQSFNQGSSNITIGLLAAVPQICTILGMIYWSRHSDRRQ
                     ERRHHTALPYLFAAAGWLLASATDHNMIQMLGIIMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALRPFMIGWLKDLTGSFNSGLWFVAALLVIGAGIIWAIPMQ
                     SSRPRATP"
     gene            29167..30057
                     /gene="hpaA"
                     /locus_tag="OQQ26_000815"
     CDS             29167..30057
                     /gene="hpaA"
                     /locus_tag="OQQ26_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
                     /protein_id="HCS1856374.1"
                     /translation="MCDRQIANIDISKKYDESLGTDDVHYQSFARMAAFFGRHMLPHR
                     HEQYFQMHFLNSGQIELQLDNHRYSVEAPLFVLTPPSVPHAFITESDADGHVLTVRED
                     LIWPLLEVLYPSTRETFGLPGICLSLADKPDELAALEHYWQLIERESVEQLPGREHTL
                     TLLAQAVFTLLLRNAKLDDHAASGMRGELKLFQRFNMLIESHFHQHWTVPDYANELHI
                     TESRLTDICRRFANRPPKRLIFDRQLREAKRLLLFSDNAVNNIAWQLGFKDPAYFARF
                     FNRLVGCSPSAYRAKKVPVT"
     gene            30308..31870
                     /gene="hpaB"
                     /locus_tag="OQQ26_000816"
     CDS             30308..31870
                     /gene="hpaB"
                     /locus_tag="OQQ26_000816"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HCS1856375.1"
                     /translation="MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPA
                     FRNAAASVAQLYDALHKPEMQDSLCWNTDTGSGGYTHKFFRVAKSADDLRQQRDAIAE
                     WSRLSYGWMGRTPDYKAAFGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNP
                     PIDRHLPTDKVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNIIGFGSAQVMGENP
                     DFALMFVAPMDADGVKLISRASYEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPW
                     ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTLEFRG
                     VQADLGEVVAWRNTFWALSDSMCSEATPWVNGAYLPDHAALQTYRVLAPMAYAKIKNI
                     IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVQRIKILKLMWDAIGSEF
                     GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVPHLHN
                     NDDINMLDKLLK"
     gene            31888..32400
                     /locus_tag="OQQ26_000817"
     CDS             31888..32400
                     /locus_tag="OQQ26_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HCS1856376.1"
                     /translation="MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVT
                     DTPPSLMVCINANSAMNPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSC
                     WQKGPLAQPVLKGSLASLEGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFH
                     PVMLEMEAAI"
     gene            32793..34943
                     /gene="btsT"
                     /locus_tag="OQQ26_000818"
     CDS             32793..34943
                     /gene="btsT"
                     /locus_tag="OQQ26_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313340.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HCS1856377.1"
                     /translation="MDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
                     PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPV
                     PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
                     RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
                     ILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT
                     IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLY
                     FAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQT
                     AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
                     TRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
                     PLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNP
                     QMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYG
                     FKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH"
     gene            35074..35277
                     /locus_tag="OQQ26_000819"
     CDS             35074..35277
                     /locus_tag="OQQ26_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HCS1856378.1"
                     /translation="MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSY
                     EEFFRERQNARYGGDGKGGMRCC"
     gene            35288..36244
                     /gene="yjiA"
                     /locus_tag="OQQ26_000820"
     CDS             35288..36244
                     /gene="yjiA"
                     /locus_tag="OQQ26_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313338.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HCS1856379.1"
                     /translation="MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMA
                     DPSPIIQTFFSHEILCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT
                     DVAGEAEKLRERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIA
                     DKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDEKPHSTMVFIGIQLPEEEIRAAFAGLRK"
     gene            complement(36313..37966)
                     /locus_tag="OQQ26_000821"
                     /pseudo
     CDS             complement(36313..37966)
                     /locus_tag="OQQ26_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001298048.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
     gene            38244..40676
                     /locus_tag="OQQ26_000822"
     CDS             38244..40676
                     /locus_tag="OQQ26_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HCS1856380.1"
                     /translation="MAELNLSNLTEADIITKCVMPAILNAGWDNTTQIRQEVKLRDGK
                     VIVRGKVAARRTVKSADIVLYHKPGIPLAVIEAKANKHEIGKGMQQGIKYARLLDVPF
                     VFATNGDGFIFRDATAAEGECLEKQITLDDFPSPAELWQKFCLWKGYTQAQLPVITQD
                     YYDDGSGKSPRYYQLQAINKTIEAVSNGQNRVLLVMATGTGKTYTAFQIIWRLWKSKN
                     KKRILFLADRNILVDQTKNNDFQPFGTAMTKVSGRTIDPAYEIHLALYQAITGPEEDQ
                     KAFKQVAPDFFDLIVIDECHRGSASEDSAWREILDYFSSATQIGLTATPKETHEVSST
                     DYFGDPVYVYSLKEGIEDGFLAPYKVVRVDIDVDLQGWRPTKGQTDLNGEVIDDRIYN
                     QKDFDRTMVIDERTELVARTITDYLKRTNPMDKTIVFCNDIDHAERMRRALVNLNPEQ
                     VKKNDKYIMKITGDDEIGKAQLDNFINPKKPYPVIATTSELMTTGVDAKTCKLVVLDQ
                     NIQSMTKFKQIIGRGTRIDERYGKLWFTILDFKKATELFADERFDGIPEKVMDTTPED
                     IADPESDFEEKLEEISEHDEEQVTGVDEPPAPPYQVTDTDDVGPLPEEDEKKIRKFHV
                     NGVAVGVIAQRVQYYDADGKLVTESFKDYTRKTLLKEYASLDDFTRKWQDADRKEAII
                     HELEQQGIIWEVLAEEVGKDLDPFDMLCHVVYGQPPLTRKERAENVRKRNYFTKYSEA
                     AQAVLDNLLDKYADAGVQEIESIQVLKLKPFDSMGTLPEIIKTGFGDRNGYNQALSEL
                     ENEIYQLPPRSA"
     gene            40743..42212
                     /locus_tag="OQQ26_000823"
     CDS             40743..42212
                     /locus_tag="OQQ26_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HCS1856381.1"
                     /translation="MSISSVIKSLQDIMRKDAGVDGDAQRLGQLSWLLFLKIFDAQEE
                     ALELEQDNYQYPIPQRYLWRSWAANAQGITGDSLLEFVNDDLFPALKNLTAPIDKNPR
                     GYVVKQAFSDAYNYMKNGTLLRQVINKLNEIDFTSASERHLFGDIYEQILKDLQSAGN
                     AGEFYTPRAVTRFMVDRVDPKLGESIMDPACGTGGFLACAFDHVKNKYVKSVADHQTL
                     QQQIHGVEKKQLPHLLATTNMLLHGIEVPVQIRHDNTLNKPLSSWDEQLDVIVTNPPF
                     GGTEEDGIEKNFPAEMQTRETADLFLQLIVEVLAKNGRAAVVLPDGTLFGEGVKTKIK
                     KLLTEECNLHTIVRLPNGVFNPYTGIKTNLLFFTKGQPTKEIWFYEHPYPAGVKNYSK
                     TKPMKFEEFQAEIDWWGNEADGFASRIENEQAWKVSIDDVIARNFNLDIKNPHQAETV
                     SHDPDELLAQYAKQQAEIQTLRNQLRDILGAALSGKEVN"
     gene            42212..43948
                     /locus_tag="OQQ26_000824"
     CDS             42212..43948
                     /locus_tag="OQQ26_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HCS1856382.1"
                     /translation="MSVEKLIVDHMETWTSALQTRSTAGRGSSGKIDLYGIKKLRELI
                     LELAVRGKLVPQDPNDEPASELLKRIAAEKAELVKQGKIKKQKPLPEISEEEKPFELP
                     EGWEWVRVADLMEVINGRAYKKHEMLQTGTPLLRVGNLFTSNEWYYSDLQLDENKYIN
                     NGDLIYAWSASFGPFIWTGEKVIYHYHIWKLNLFAEEYSNKYFIHDFLLSITDKIKSQ
                     GNGIAMLHMTKEKMEQQIIALPPINEQQQIVRKIRELTVLCDQLEQQSLTSLDAHQQL
                     VETLLGTLTDSQNAKELAENWARISEHFDTLFTTEASVDALKQTILQLAVMGKLVPQD
                     PNDEPASELLKRIAQEKAQLVKEGKIKKQKPLPPISDEEKPFELPEGWEWCKFGLTSE
                     FINGDRGSNYPNKNEYVSQGIPWINTGHIEKNGTLTVTEMNFITEGKFNELRSGKIQK
                     GDLVYCLRGATFGKTAFVTPYETGAIASSLMIIRPFITEMGGYIYNYLTSPFGRSQIY
                     RFDNGSAQPNLSANSVMLYSFPCPPLTEQYRIFSQVGLLHELCDKLKTRIKTAQQTQL
                     HLADALTNAAIN"
     gene            44169..44510
                     /gene="symE"
                     /locus_tag="OQQ26_000825"
     CDS             44169..44510
                     /gene="symE"
                     /locus_tag="OQQ26_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease SymE"
                     /protein_id="HCS1856383.1"
                     /translation="MTDTHSIAQPFEAEVSPANNRQLTVSYASRYPDYSRIPAITLKG
                     QWLEAAGFATGTAVDVKVMEGCIVLTAQSPAPEESELMQSLRQVCKLSARKQRQVQEF
                     IGVIAGKQKVA"
     gene            complement(44557..46650)
                     /locus_tag="OQQ26_000826"
     CDS             complement(44557..46650)
                     /locus_tag="OQQ26_000826"
                     /inference="COORDINATES: protein
                     motif:HMM:NF015210.1,HMM:NF019151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HCS1856384.1"
                     /translation="MKATEARLLDFLKRSQQFVIPIYQRTYSWTEQQCRQLWDDIIRA
                     GKRDDISAHFIGSVVYIEQGLYQVSGISPLLVIDGQQRLTTAMLLIEALSRHLGEDEV
                     FDGFSAMKLRNYYLLNPYESGEKGFKLLLTETDKDSLLALIKQRPMPENYSHRIMENF
                     TFFDEQIAKLGDDLIPLCRGLAKLLIVDVALNRGQDNPQLIFESMNSTGKALSQADLV
                     RNFILMGLEPEHQTRLYEDHWRPMEVAFGQQGYSEYFDSFMRHYLTVKTGEIPRTDEV
                     YEAFKLHARSQSVAEKGVDRLVEDIHIYAEYYCAMALGKESDKSLATAFQDLRELKVD
                     VAYPFLLALYHDYKNDDLSHEDFLSIIRLIESYVFRRAVCAIPTNSLNKTFATFYKVI
                     NKEKYLESIQVHFMNLPSYRRFPNDDEFKRELKVRDLYNFRSRSYWLRRLENDKRRER
                     VEEFTIEHIMPQNENLSAKWREELGSDWQRIHKELLHTLGNLTLTRYNSRYSDRPFAE
                     KRDIEDGFKHSPLYLNIGLGQCEKWDEAAIHARADRLADVAVQVWQAPALPEEVLAVY
                     RAQPENKTSYSLSDYPFLADGSHSRVLFDHLRDEVMRLDAGITQEVLKLYIAFKAETN
                     FVDVVPQKSRLRLSLNMQFHELVDPKGIAKDVTNVGRWGNGDVEIGFSDLAQLPYIMG
                     LIRQAFEKQMESALV"
     gene            complement(46747..46911)
                     /locus_tag="OQQ26_000827"
     CDS             complement(46747..46911)
                     /locus_tag="OQQ26_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HCS1856385.1"
                     /translation="MEFHENKAKTPFIRLVQFWQAVRRWRRQMQARRVLQQMSDERLR
                     DIGLRREDVE"
     gene            47088..>48098
                     /locus_tag="OQQ26_000828"
     CDS             47088..>48098
                     /locus_tag="OQQ26_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HCS1856386.1"
                     /translation="MTRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQ
                     QAYQTLETMKLITPQPRSGYFVAQRKAQPPVPPMTRPVQRPVEIIQWDQVLDMLVAHS
                     DSSIVPLSKSTPDVETPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLML
                     DSGSVVTADDIIITSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIE
                     IPTDPETGISVEALEQWPIKGIILVPNCNNPLGFIMPDARKRAVLSLAQHHDIVIFED
                     DVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPERYHDKLLHMKY
                     AIS"
BASE COUNT        12314 a        12345 c        11611 g        11828 t
ORIGIN      
        1 tgattaaaga aatcaaagaa cgaatcggca gcttagacgt gcgagacaat gttgagcgcc
       61 gtgcttatga aattgctctg gcatcactgg aagcagagcc ggtggcgtgg cttcattcag
      121 acaatggctt aggtattccg gcaataacca ggagcaaaaa cattgctgac agttggttat
      181 caaagggctg gtatgttcag ccgctatata tggctcagcc agtgtcggtg gtgccggatg
      241 ctcttccgtc tttaaataat ggcatagtcg gctttgatga aggctggaac gcctgccgcg
      301 ccgtcatgct tcatggtgcc gaacctgtaa gccagactta caagttgaac aagctgtcgg
      361 gcaaccctcc tgtaactccg gatggttgga taagctgtag tgagcgaatg ccagaggacg
      421 gtcagcacgt aattatttta tgtgatggcg cattcgttct ttatgcgcaa tatcgagacg
      481 gtgagttttt tgatgttgtc cgcaatggtg aggagttctt cgaaacgcag agccgcaatg
      541 taacccactg gataccgcta ccggagccgc cgcaggaggt aaattaatga acaacttaat
      601 gacaacaaaa caagtcgccg aattctgtgg cgtttcaata tcgacggtgc ttcgctggaa
      661 cagcgtaaac cggagaactg gcaagaaata cagaccagac tttccagatc ctgatattaa
      721 atcctgccca aataaatggg catcacaaaa gatttacagg tttgcaggag tcattgagta
      781 atatgcctta gatcagatgt aagctgacac accactatgg cacagagtca aacctaatct
      841 aactacctgc tctgtgccaa aagaagatac tactaacata agtataaaat aatcaacggg
      901 acacagctca tctgtactac tccacaagcg ggataagttt tttacctgtg tcttcaaaga
      961 atgaaaacga agaccagcgg taagtatata aaaaagccac tttgcctgca tgttcttcga
     1021 tagctttttt taaatatgac ttgcgtttac tgacttctgg aaatttatcc gaaaagataa
     1081 ctattgctct tgatgatagt ccaccaccat tccgcataaa gagagtaaac tcactcaatc
     1141 taagcatatt gaaatttgca caattcgcta catcattatc aaacttagca actatacttt
     1201 ttattttgtc atacagactg accatatccc taaaaatatt ctcatctgcc aactgaatat
     1261 ttctttcatt caactctgtt atatatttat tatcatccac tattccaata ggatatcgag
     1321 catttaaaac tatatctcga gacgcaactt tcaataactt cagttcgtca acggttaatg
     1381 gcaaacctaa atcaacagcc atacaatcaa gtttatgccc ataattacaa aactcatttt
     1441 caatagcttt ttttctcgca ccgagattca ttagaagaat cgctgacttt aacaacattt
     1501 caaaagcata ccccaacata agtctgctag tttgatcagt tgccgatgcg atatcgatgt
     1561 attcatgaac aataggagat ttcttacttg ctgcccgaag caattttttg tttcgctcac
     1621 cttcacttct caacagcttc gcagataaat acagtttttt agactctgtt aaccaagcct
     1681 ttcgatcaaa tatacctttc ccatttttct gcgtgattat ctcgctctgc atcaataact
     1741 cctatgttat tagaaccaaa cctgccacta atcaattgca aatctcgtcg ctgttatttt
     1801 gaccagacat tacattgtct ccatttgtaa aataccactt aactaacttg aatgagaaat
     1861 tgtaagtatt ccgacaaaac agactatcag ttggggtctg agctagcaca agtaatgatc
     1921 gattcaaccc tctcccacca cgcctggtag gctttacgct gttcttctag ataatcgctc
     1981 ttgtcataaa cctgccaaac ccctggcagt ttatggccga gcattatttc tgcaatatga
     2041 ggagcagtaa gatcagaaaa gtttgttcgt gctgttcgcc tcaaatcatg aagagaccaa
     2101 tgagggaatt gataccccaa acgccgccat gcgtactgca ttaaattgta aggcagcgac
     2161 tgcaatgatg ttcgaccaac gggttccctg cttccttcct tagtaaaaag catatcggaa
     2221 ccattgttca tagagatagc gttctttata agctcctcca ccggttcaat aatgggcctc
     2281 tttagcggtt cgcctgttat ctccccagtc ttatgtcgtt ctggtggtac agtccatacc
     2341 ttattaatga aatcaaaatc gtccaccctg gcagtaatta gctctgaact acggcagcca
     2401 aaatgcagca atagcttaat gaaggcccgg tatttaggaa ccattcgaga accatcgatc
     2461 gcagcataaa ggattttaat ttcatcatgt gtcagaaacc gtttcttctg acctttacgg
     2521 atatccatat ctttacccgt gatatccgac agcgggcgag tttcaatgag ctttctctta
     2581 tacgcccaga catgggcctg ctttgcgtta attagcaatc ggtctgctat tgctggagtc
     2641 ttagtgctaa gaggctccag gacttctaac caatcatgca atgtagctgc atcgtgaggg
     2701 atattcccga ttttagagaa caggtgcagc tcaaacgagc ggagtatctg ttcagaacct
     2761 tttttatttt ttacacaata tgcttcatac caggcacgga tcacagactc taccgtcatg
     2821 gcttcagtag cttttcgttt ttcagcctgc ttgacaaatc gtggattacg gtttgactca
     2881 agttcaccac ggagacgaat aacttcttct ctggcctctt ttaatccagt tgccgggtaa
     2941 gttccgatat caagacgctc acctttccct gcccattgat aacgatattg gaacactacg
     3001 cgacctttcg gtgatactct gacagacaga ccatcacgat cggatttaac caaaacctta
     3061 tcacgttcct ttccaacgac tgaacgcaac cacgcatcag acagcgccat tactcacctt
     3121 gtacaaatcg caaaacacct ctgctgcttt gtacattatg tacaagcata tgtacagatt
     3181 tttgatgaaa gcaacctgat cgatttaaag ctacatgaaa gaattttcaa ttaaagaagc
     3241 catataacca aatgtattta aatgagttat atgactcaac ctcaattaac tgaaaggatt
     3301 ttgaaagaat aaaagagctt taaattgggc ttaattattg gggtgagaaa taatagcaaa
     3361 agtgcggcgc ttcgccacct cttgcaaata aggagacaac gtcataattc tttcttcttg
     3421 agtaagcggc atcgcgccgc gcttgttgaa aacgaaaaat tgcggctatt ttacccatca
     3481 acggggggga ggcaatcagt gtttacacag gagctgctcc agttcgtgca acgaagaaac
     3541 ggtccaagtg ggcgcgatgc cttctggttg ctcgcgatgg tgtgcattca gccagcaggt
     3601 cacaagcccg gcgttgatgc caccgagaat atcggactcg gcagtgtcgc caaccatcag
     3661 cacgcgtgaa cggtcaggat tgcccgcctg ttccagcgca taatcgaaaa ttttcttatt
     3721 cggtttggca acgccaactt cttcggaaat caccagcaaa tcgaagtaat cacgcaggcc
     3781 cgtccgttcc agacgcactt gctgcaaggc gctaaaaccg ttggtgatga tgccgatttt
     3841 agcgttgcca cgaatggcgt taagcagaga aaccgcgccc ggcagcggcg tgcagatttc
     3901 cgccatcgca ttaataaagg catcgttaag caagcctgct tcaactttca gccgttcggc
     3961 ccagctctcg aaacgcccgt gctgaagctg taatgaagtg atcgcgccgt tttgataatc
     4021 cacccacagt ggtttgttaa cggcctgata gtcctgaaaa tcttcagcgg taaaggtgac
     4081 gctgtaatca agaaacatcc gctgcaggcc ggtgaatgag tcaaaggtaa acagcgtttc
     4141 atcggcatca aagaaaatcc agtcccactt cattattcca ccttgtctta catactgatt
     4201 ggcaacgcca tgatgatggc gtcttcgcga ccgtccgtgg tggggtagta attgcggcga
     4261 atcgtcgcct cgttaaagcc taaactttcg tacagggcaa tggcggcagc gtttgaagca
     4321 cggacttcca gccatagtgt cgccacgccg cgtttttcca gttcgtcgat cagatgttcc
     4381 agcagcgccc ttcccaatcc ctgacgctga tagtcaggat cgaccgcaat attgaacaat
     4441 gtagcttcat ccagcaccac ttgcgtaatc gcaaacgccg ccattttgcc gttttgcgtt
     4501 aactgaaagt tgagataacg ctcgccctgg ttgctggcaa aggttttttc actccacgga
     4561 aaggcgtggg cgcgttgttc aatgtggtaa gccgctggta aatcagtcgt ttcgagggaa
     4621 gaaatcgtgt tcatatgtgc aaatttgttg ccataacgcg gcgcgtgccg ttgggtttgc
     4681 ccgtaattcg gtgagcgccg gtgatgccac ctgagcgcct tccagtgata gcggttcgtc
     4741 agtacccaac cgccagttgt tgcagcgact gccttgcggc agcatcgcga ttttttctgg
     4801 cgtcagttgc agcacttgat cggggctgac ggttaatgcg cgcagaacat cgctcactaa
     4861 aggatcagtc agggcgggaa gatcgtttgc caccatcacc agacggacgt gtgccgggat
     4921 cgcaatggca atctccccct gcaacgcgcc agggcgacgc agcgaccact gggtaatgcc
     4981 cagttgctgt aactgccagt ctcgtcggga tgtcatagcg aatcgctcct gttgtcaggg
     5041 gcgcaaatat agcaaattcg tcgataccgc gccaacatat ggctataatc gccgccagta
     5101 tcaattgagg agcattccat gtctgcattt accccggcaa gtgaagtctt gctgcgtcac
     5161 agtgatgatt tcgaacaaag ccgtattctg tttgccggag acttacagga tgacctgccc
     5221 gcgcgtttag ataccgcggc cagccgtgct catacccagc aattccacca ctggcaggta
     5281 ttaagccgcc agatggggga taacgcccgt ttcagtctgg tcgccacggc ggatgacgtc
     5341 gcagattgcg atacgctgat ttactactgg ccgaagaaca aaccggaagc ccagttccag
     5401 ttgatgaatt tactttctct gctgccggtg gggacggata tttttgtcgt tggcgagaac
     5461 cgcagcggcg tgcgcagcgc cgagcagatg ctggctgatt atgcgccgtt gaataaagtc
     5521 gacagcgccc gtcgctgtgg cctctatttt ggtcgtctgg aaaaacagcc agtatttgat
     5581 gcggataaat tctggggcga atacagcgtc gatggcctga cggtcaaaac gctgccgggc
     5641 gtgtttagcc gcgacggtct ggatgtcggt agccagttgc tgctctcgac gttaactccg
     5701 cacacgaaag gtaaagtgct ggatatcggc tgtggcgcgg gtgtgctttc agttgccttt
     5761 gcgcgccatt cgccgaaaat tcgtctcacc ttgtgcgatg tctctgcccc ggcggtagaa
     5821 gccagccgcg caacacttgc agccaacggt gttgaaggtg aagtttttgc cagcaacgtc
     5881 ttttccgagg tgaaaggtcg ttttgatatg atcatctcca acccgccgtt ccacgatggg
     5941 atgcaaacca gcctggatgc ggcgcaaacg ctgattcgcg gcgcggtgcg tcatcttaat
     6001 agcggcggcg agctgcgaat tgtagcgaac gccttcctgc cttatccgga cgtgctggat
     6061 gagacatttg gcttccacga agtgatcgcg caaactgggc gcttcaaggt gtatcgcgcc
     6121 attatgaccc gccaggcgaa gaaaggttaa ttatctcgcc gaataccgtg tcggatgcgg
     6181 cgtgaacgcc ttatccgacc tacaaaacct gcacgttagc ccttcgtagg ccagataaga
     6241 cgcgccagcg tcgcatctgg catctgcccc cgcatgccta ccaaacctgc acgctagttt
     6301 cctgatggac atttttccag caattacacc tccggcgata attaactatt gacgaaaagc
     6361 tgaaaaccac tagaatgcgc ctccgtggta gcaattcttt ttaagaattg atggtatgcg
     6421 aaggtggcgg aattggtaga cgcgctagct tcaggtgtta gtgtccttac ggacgtgggg
     6481 gttcaagtcc cccccctcgc accaaaaacc acgttgatat tgctcgcact gggcgaaggt
     6541 ggcggaattg gtagacgcgc tagcttcagg tgttagtgtt cttacggacg tgggggttca
     6601 agtccccccc ctcgcaccaa acgaggcgat atcaaaaaaa gtaagatgac tgtgcgaagg
     6661 tggcggaatt ggtagacgcg ctagcttcag gtgttagtgt ccttacggac gtgggggttc
     6721 aagtcccccc cctcgcacca attatcttta cttcctttct tgtttcttcc ctgttttgtc
     6781 atccctgatt caaattcatt atcatcagca tgatgccagc actaagcgcc aggcacgatg
     6841 gtagcaaaac gtaatgccgt aactgtttgt gatacagcat caccggcgtc aatactaatc
     6901 ccatcagaat gacaatccgc cattgatcag gcgataaatc cgcatacatc agccctgcaa
     6961 tcagcaatcc cggcagcaac actccccagc cactgcccag cgtacgttgc aacatggttt
     7021 catctctttc attgataatg ataaccaata tcatatgata atttttatca tttgcaagcc
     7081 agagaaatcc cttgctatcg ggtaaaccta ttgctaggat tagcaattat tatcatttag
     7141 attactatcc cgattatggc ctatcgttcc gcaccgctct atgaagatgt tatctggcga
     7201 acgcatctcc agccgcagga tgctgggctt gcacaagccg tacgtgcgac gatcgccgaa
     7261 catcgtgaac atttactgga gtttatccgc ctggatgaac ccgctccgct taacgccatg
     7321 acgctggcgc aatggtcatc accgaatgcg ctaagttctc tactcgcggt ctattccgat
     7381 catatctatc gcaaccaacc aacgatgatc cgcgagaaca agccgctgat ctcactgtgg
     7441 gcgcaatggt atatcggcct gatggtgcca ccattaatgc tggcgctgct gacgcaggaa
     7501 aaagcgttag atgtgtcgcc ggaacatttc cacgttgagt ttcacgaaac cggccgtgcc
     7561 gcctgtttct gggtcgatgt gtgtgaagat aaaaacgcaa caccacattc gccgcagcag
     7621 cgaatggaaa cgttaatcag ccaggcgctg gttccggttg tgcaggcact agaagcgacc
     7681 ggagagatca acggcaaact tatctggagt aataccggtt atttgatcaa ctggtatctc
     7741 actgagatga agcaactgct cggcgaggcg acggttgaat cgctgcgcca tgccctcttt
     7801 tttgagaaaa cgctcacgaa cggtgaagat aatccactct ggcgtaccgt tgtgctacgc
     7861 gacggcctgc tggtgcgccg cacttgctgc cagcgttatc gcttaccgga tgtgcagcaa
     7921 tgtggcgatt gtacgctgaa atgaaagcac tgccggggaa gtaaacccgg cataatgcgg
     7981 attaataggg atgcaacaca ttacttgctt cgcaatgccg catacataac agaatatctg
     8041 cggcctccaa caaccctgca tcagaactga cgcccagttt cgacatcaca ttaaatttat
     8101 gtgcacggat cgttttgata ttgcgtttaa gctgctcggc aatttgtgtc attgagtagc
     8161 cacgcgacat aaagcgcaat atttctctct ccgtcgggct taacgtccgg ctttggttaa
     8221 tgtaccactg attgttcagt cggtcggtcg cctgacgtac accatttaat gacaaaaaga
     8281 gttcctgatg aaaaatctcc agcgttgacg ctttacttaa tacaccgtcc agcggtgatg
     8341 gcgacaatga accaatcagc cgagcttcaa tatcatcatc cgcaataact aaacgccggg
     8401 tacgcggaaa cttaatcgcc agttcagtca ggcaagataa tccctctctg cgctcacttc
     8461 tcatggcaga aaaagaaaaa tgaccgccgc aaatgagatc cacgacatgg catcctgaaa
     8521 tgactcctga ctggtatagg tatggagctt ataagggtta cccgcaaact ttctgaataa
     8581 actctcaata ccgatactgc tcatgacgca tttttctatg agtgcgacat ttctcttctt
     8641 aattcggctg tgttccattc tgcggcatct ccataaacag aaggcaagtt aagttctctt
     8701 gtaccctgcg cgctatttat ccatgcatac atttcagcgt tgctgtgaat tgccagtcga
     8761 cgcatcgcac tgtttttttg ggcgctgata gttttattac ttttcttaag caatgaagct
     8821 atctggttga tgccccatcc tttacctaat agccgcagta ccttgcgctc tgaaagagtg
     8881 agaatgacgg agcgatagct aaaatcatga gtttcattca ttgccggaga ggtcagcatg
     8941 gcgctgatac gctctgcgtg cgtattgctg gaacgtacgg tcttgaccag attctcaatg
     9001 ggttcaacat cagacaataa cgtcgccgta gggcacatga gcaattctac tgcctgggaa
     9061 taccaggaac gtgacaccat gaaaacccag tgaatttccc gatattgtga gattaaagaa
     9121 taataatgct cacaaacaga acgtggatct tcactttcac cggctaaatc agcgatgact
     9181 aatccggaac gacgtaattg taataaggta aggtcctccg cagaggcgct ggatattatt
     9241 tcatattcag gtaagtgagt cctcatgacc tcttttaacc ctgcttgcat aacaggtatt
     9301 ttactgataa caattccatt tttgcagcat cctggcaaca tatttcctcc acatccactg
     9361 tctaaaaatc atgatggttt attcaggata ttcattcctt aaatgcttcc agcaaattaa
     9421 tagattaagc gaataaatta tccttagcat tcactttcat atcagcatac tcctgctgca
     9481 caacaactcc actgcatgtg tcagaaggtt agcatcaaat gataacctgg tgaaatagcc
     9541 tggagacatt taaaatatct acattaagtt gttagaaata cttaatgaaa aaaagaattc
     9601 tcattcattt aatttataat taactgatat cccttcccgc aggatgcaaa atcacacaac
     9661 caatatttat tcaatgaaat ctgatggttt taacttgtta acattaaaaa acgtgcccgg
     9721 ttatctatta tcctgattcg taaaggccaa acaataaatt cattatggtg ataatattca
     9781 tgtgatagtt tgtttgcggc gagagataat tcgcttttta tcaccgagct tctcccgata
     9841 accaggatta atcagcgcaa ttttgatctt aacctaccgc aaaacaaccg tgcttcatga
     9901 tacaaatgaa ttctcattat ctgaacaata cgcagcacgt ctatgacaaa gggcgagtta
     9961 tgcaaactga gcaacagcga gccgtaacac ggctttgtat ccagtgtgga ttatttcttt
    10021 tgcaacatgg tgcggaaagc gcgttggttg atgagctttc ctcacgactg ggtcgggcgc
    10081 tgggaatgga cagcgtcgaa agttctatct cttcgaacgc catagtgctg acaaccatta
    10141 aagatgggca atgcctgaca tcgacacgaa aaaatcacga tcgcggcatt aatatgcatg
    10201 tggtgactga agtccagcac attgtgattc tggcggagca tcatctgctg gattacaaag
    10261 gcgtagagaa acgatttagc caaattcagc cattacgtta cccaagatgg ctggtagcct
    10321 taatggttgg cctttcttgc gcctgtttct gtaaactcaa taaaggtggc tgggatggtg
    10381 ccgtcatcac cttctttgcc agtacggccg cgatgtatat ccgccagctg ctggcacaac
    10441 gtcatcttca tccacagatc aacttttgcc tcaccgcttt cgccgccacc accatttccg
    10501 gtttgctttt gcaacttccc acgttcagca atacacccac catcgcgatg gccgccagcg
    10561 ttctgctgct ggtgccgggt tttccgttga ttaatgccgt cgccgatatg tttaaaggcc
    10621 acatcaatac cgggctggca cgctgggcga tcgccagtct gctgacactg gctacctgcg
    10681 tcggcgtggt gatggcactg acgatttggg ggctacgcgg atgggtgtga tcgagtttct
    10741 gtttgcattg gcgcagtata tgatcctcgc cgccattcca gcggtcggct ttgcgatggt
    10801 gttcaacgtt cccgttcggg cgttacgctg gtgtgcgctg cttggcgcga ttggtcatgg
    10861 ttcccgaatg atcttaatga ccagcgggct gaatattgag tggtcaacct ttatggcttc
    10921 tatgctggtc ggcaccattg gtattcaatg gtcgcgctgg tatctggcgc atccgaaagt
    10981 gtttaccgtg gcggccgtta tccctatgtt cccgggcata tcggcttata ccgcaatgat
    11041 ttcggcggta aaaatcagcc agttaggtta cagcgaaccg ttgatgatta ccctgttaac
    11101 caactttctt acagcttcat cgattgttgg tgcgttatcc atcggtcttt ccattcctgg
    11161 attatggttg taccgcaagc gccctcgcgt ataaaattgc ctcgcttaaa gcacacggat
    11221 gagagacagc ctcctctcct ccgtgtgtta ctataaaagt tatctccctt ctcgttcatc
    11281 gttccatatt tgagaaacag tatgtcttcc agagttttga ccccggacgt cgttggtatt
    11341 gacgccttgg tacacgatca ccaaaccgtt ctggcaaaag ctgaaggcgg tgtggttgcc
    11401 gtatttgcta acaatgcccc ggcgttttat gccgtcacgc ctgcacgcct agctgaactg
    11461 ctggcgctgg aagaaaagct ggcgcgtccg ggaagcgatg tcgctctgga cgatcaactc
    11521 tatcaggaac cgcaagccgc tcccgttgct gtacccatgg ggaaattcgc catgtatccg
    11581 gactggcaac ccgatgccga ttttatccgc ctggcggcgc tatggggtgt ggcactaaga
    11641 gagccggtga ccaccgaaga actggcctca ttcattgcct actggcaggc ggaaggtaaa
    11701 gtctttcacc atgtacagtg gcaacaaaaa ctggcgcgca gcctgcaaat cggccgtgcc
    11761 agcaacggcg gactgccgaa acgagatgtg aatacggtca gcgaacctga cagccaaatt
    11821 ccaccaggat tcagagggta acgatgaaaa acgttggcga cctgatgcaa cgcctgcaaa
    11881 aaatgatgcc tgcccatatc aaacctgcgt tcaaaacggg tgaagaacta ctggcctggc
    11941 agaaagaaca aggagcgatc cgctccgccg ctctcgaacg tgaaaatcgg gcgatgaaaa
    12001 tgcagcgcac ctttaaccgc tccggtattc gtccactgca tcagaactgc tcctttgaga
    12061 actatcgcgt tgagtgtgaa gggcagatga atgcgttaag caaagcgcgc cagtatgtcg
    12121 aagagtttga cggcaacatc gccagcttca tcttttctgg taagccagga accggcaaaa
    12181 accatctggc ggcggcaatc tgcaacgagc tgctgctacg cggtaaatcc gtattgatca
    12241 tcaccgtggc cgatattatg tcggcgatga aagatacctt caggaatagc ggtaccagcg
    12301 aagaacaact gcttaacgat ctgagcaacg ttgatctgct ggtgatcgat gagatcggcg
    12361 tgcagaccga atcgaaatac gaaaaagtga tcatcaacca gatcgtcgat cgccgctctt
    12421 cttccaaacg cccaaccggg atgctgacca acagtaatat ggaagagatg accaagttgc
    12481 tgggcgaacg cgtgatggac cgtatgcgcc tgggtaacag tttgtgggtg atcttcaact
    12541 gggatagcta ccgtagccgt gtaacaggta aagagtatta atccccgttt ctggcggtat
    12601 actgcgacac aattccacct tgagtaatga tgatgaaaac tgttaaacat cttctgtgct
    12661 gtgccattgc cgccagcgca ttaatttcca ccggggtgca tgctgcgtcc tggaaagatg
    12721 cgctctccag cgccgccagc gaacttggca accaaaacag cacgacacag gaaggcggtt
    12781 ggtcgctcgc gtcattaact aacttgctta gcagcgggaa ccaggcctta agcgcagata
    12841 acatgaacaa cgccgcaggc attctgcaat actgcgcgaa gcaaaagctg gcttcggtaa
    12901 ccgatgccga aaacatcaag aaccaggtgc tggaaaagct gggcctgaac agtgaagagc
    12961 aaaaagaaga caccaactat caggatggca ttcagggttt gctgaaaacc aaagatggtc
    13021 agcaactcaa tctggataac atcggaacga ctccgctggc agaaaaggtg aaaaccaaag
    13081 cctgcgatct ggtgttaaag caggggctga acttcatttc ctgaaccgcg aaacgccgcg
    13141 ttttagctgt tacccggctg acgcggctct ctcctgccct tttccctgct cctggacggt
    13201 tttccccctg ttacacggga agcgaccgcg atcaaaaaag tctgtttata aactaattcc
    13261 taacaacatc gcattttttt gacactagaa ttgcagcaat atggcgacgc cattacattg
    13321 tgcttctcaa aaagcttaaa cgttggctaa acggcccggt ttagtgagga tcgcccgttg
    13381 tcagaactac tctctttcgc cctttttctc gcctctgtgc tgatttacgc atggaaagcg
    13441 ggacgtaaca cctggtggtt tgcagccacg ttaacggtgc tggggctatt tgtcgtttta
    13501 aatatcaccc tgtttgccag cgactatttt actggcgatg gtattaacga cgcggttctc
    13561 tataccttaa ccaacagcct gaccggtgct ggcgtcaaca aatacatcct gccgggtatc
    13621 ggcattgtgc tggggctgac agcggtgttc ggtgcgctag gctggatcct gcgccgtcgt
    13681 cgtcatcatc cgcaccattt tggttacagc ctgctggcgc tcttactggc gctgggttcg
    13741 gtggacgcca gcccggcatt tcgtcagata acggaactgg tgaaatccca gtcacgcgat
    13801 ggcgaccagg actttgcggc ttattataaa gagccgtcga aaactatccc tgacccgaaa
    13861 ctcaacctgg tttatatcta cggcgaaagt ctcgagcgga cctattttga taacgaagct
    13921 ttcccggatc tcacgcctga actgggcgcg ttgaaaaatg aaggcctgga tttcagccac
    13981 acgcagcagc tgccaggaac ggattacacg attgcgggca tggtggcttc tcagtgcggc
    14041 ataccgctgt ttgccccctt tgaaggcaac gcctccgctt ctgtttccag cttcttcccg
    14101 cagaacatct gtctgggcga tatcctgaaa aactcgggtt atcagaacta tttcgtgcag
    14161 ggcgcgaatc tgcgttttgc cggtaaagat gtgttcctga agtcgcatgg cttcgaccac
    14221 ttattcggct cagaagagct gaaaagcgtg gtggccgacc cgcactatcg caacgactgg
    14281 ggattctacg acgataccgt tctcgatgaa gcgtggaaaa agtttgaaga gctttcccgc
    14341 tcaggtcagc gattctcact gtttaccctg acagtcgata cccatcaccc ggatggtttt
    14401 atctcgcgta cctgtaaccg caaaaaatat gattttgacg gtaagccgaa ccagtcattc
    14461 agcgcggtaa gttgcagcca ggagaatatc gcggcgttta tcaacaaaat caaagcgtca
    14521 ccgtggttta aagataccgt catcgtcgtc tcttctgacc atttagcgat gaacaacacg
    14581 gcgtggaaat accttaataa gcaggatcgc aataacctgt tttttgtcat tcgtggcgac
    14641 aagccgcagc aagagacgct ggcagtgaag cgtaacacga tggataacgg cgcgacggtg
    14701 ctggacattc tcggtggcga taactatctc ggacttggtc gtagcagttt atccgggcag
    14761 tcaatgtcgg aaatcttcct caatatcaaa gagaaaacat tggcatggaa gccggatatc
    14821 atccgcctgt ggaaattccc taaagagatg aaagagttca ccatcgacca gcagaaaaac
    14881 atgattgcct tctcgggtag ccatttccgt ttgccgctgc tgttgcgggt ttcagacaaa
    14941 cgcgtggaac cgctgccgga aagcgaatac tcagcaccgc tgcgtttcca actggccgat
    15001 ttcgctccac gcgacaattt cgtctgggtt gaccgttgct ataagatggc acaactctgg
    15061 gctccggaac tggcactctc caccgactgg tgtgtctcgc aagggcagct tggcggtcag
    15121 caaattgttc agcatgttga caaaacaaca tggcagggca aaacggcatt taaagatacg
    15181 gtcatcgaca tggcgcgtta taaaggcaat gtcgatacgc tgaaaattgt tgataacgat
    15241 attcgctaca aagccgacag tttcatcttc aacgtcgccg gtgcgccaga agaggtgaaa
    15301 cagtttagtg ggatttcccg tccagagtcg tggggccgct ggtccaacgc gcagctgggc
    15361 gatgaagtaa aaatcgagta caagcatccg ctgccgaaga aatttgacct ggtgattacc
    15421 gccaaagcat acggcaataa cgccagccgt cctattccag tacgcatagg caatgaagaa
    15481 caaactcttg tgctgggcaa tgaagtgacc accaccacac tgcatttcga taacccaacc
    15541 gatgccgaca cactggtaat tgtgccgccg gaacctgtct caaccaacga agggaatatc
    15601 ctcggacact cgccgcgtaa gctcgggatc ggcatggtgg aaattaaagt tgtggaacgt
    15661 gaagggtaat ttctgactga tgtgtaggtc gcataaggtg cgatctacac atcttctccg
    15721 gcctacaaaa catcattgag aaacagaaaa aaaacagcgc ccaacacttc cccggacgct
    15781 gcatggcaac tttaataatc tcgccttatc agaaagtaat tacaccctta atcaactcac
    15841 gattgttaat cacatcgcgc tcgtaggttt ctgccagcgt ggcgaacgga tagctatggg
    15901 ttaacatcat gtcagcagtg atttttcctt ccgccatcag tcgaccgact ttagcaaaat
    15961 cttccggcgt ggcgttgcgg ctgcccatca tcgtcgtttc ttttttatgg aattccggat
    16021 cggagaaccg caactcacct ttaaacaggc cgacaaatac caccgtgcca ccgtgacgaa
    16081 tcagattcac ggtgttattc atcgcatgtt gattacctgt cgcgtcgatc actttctgcg
    16141 ccagagaacc accaaactgc gcccgtagct gcgcgtcaaa atcttcggct gacgggtcca
    16201 gtacaagtaa ttccagacgc gttgccacat gttcacggcg cgccggactg gtatcagcca
    16261 ccaccacctg tgcgccatcg gctttagcga ttgccgccgc gcccagaccg attggccccg
    16321 ccccgaccac cagcacctgc tcgccgggag caatggctgc gcgacgcacc gcatgagcgc
    16381 taatagcgaa aggttcaatc aatgctgccg cctgcgagtc aataccgtct gcgggcaaaa
    16441 tgttcgccac cggcacgctc aaatactcac taaaaccgcc atcctgatgc acgccaatga
    16501 ctgaaatttt ttcacagcaa ttggtacgcc cgcttttaca cgccgggcat tgctgacagg
    16561 caacataagg gatcacagca acttgctgac catttttaag atcagcaata tttttaccca
    16621 gcccaacaat ctccccacat atttcatggc ctaaaacacg tggataacta aaaaatggtt
    16681 gatttccacc ccaggcatga atatcggtac cgcaaatccc gacagactta atttttatta
    16741 atgcttcatt gtcacccgga ataggtatct cgcgttgttt ccagactaat tctttcggct
    16801 gctggcaaat taaaacattc atcgtagaca tgattcggct ctccattttt tgttgcctta
    16861 gatatcaatg aaaatgaaaa atggcagcgg aacggaaaat ctgttttgtg aaaacacacg
    16921 cataaaaatg ttttaaatcg ggttttaatg gactcacaag gaggaaaata tgagtcgttc
    16981 acaaaattta cgccacaatg tgattaacca ggtcattgat gatatggcgc ggggtcatat
    17041 cccttcccca cttccatcgc aaagtgcgct ggcggaaatg tacaacatca gccgcaccac
    17101 agtgcgtcat attctcagcc acttacgcga atgcggcgtc ttgacgcagg ttggaaacga
    17161 ctatgttatt gcgcgtaaac ctgaccatga tgacggtttc gcctgtacta ccgcttcaat
    17221 gagtgaacaa aacaaagtgt ttgagcaggc ttttttcacg atgataaacc agcgccagtt
    17281 acgcccaagg gaaacgtttt ctgaactgca actggctcgg gccgcgggtg tcagcccggt
    17341 tgtagtaaga gaatatcttt taaaattcgg ccgttataat cttattcaca gcgaaaagcg
    17401 cggccagtag agcatgaagc aattcgatca atcctacgcc gagcagctgt ttgagctacg
    17461 cgaaatgctc gaaacacatt cacttcagca ctttctcaac ctgcctgatc atgatccccg
    17521 ctggctgcag gcgaaaacca tgctcgaacg tcatcggcta ctgcatgaca acatcggcaa
    17581 tagctttcgc atgttctcgc aacttgacag agattttcac tccttactgc tttcaactgc
    17641 cgacaatatc ttttttgatc aatcgcttga gatcatctca gtcatctttc attttcacta
    17701 tcaatgggac gaaagcgatc ttaaacagcg caatatcatt gccgtcgatg agcatatgac
    17761 cattctcagc gctctgattt gccgcagtga ccttgatgcc acccttgcgc tccgtaacca
    17821 tttgaattca gctaaacaat caatgattcg atccattaat gagaacacgc gttatgctca
    17881 ttaagtacgg attaaaaaca gcaaactatt agcgggtgca cggttttatc aaaagataaa
    17941 taccgggaaa ttcccgctta cctatgctca caatcagtcg actaaaaatg tttttgtgag
    18001 cggtagtaaa gtcctaaaac tttaacctgc cgttaatgtc aaccttgcgt aatgcacaat
    18061 tacgtaaaca attaaaatta taaatacagg agtccggcgc ggaaaaagaa aatatcacca
    18121 tcgttccgcg ttcttcattt actccatctt cgtcggcaga tattcccgtg ccaccagatg
    18181 gattagttca acgcagtacc cgaattaaac gcattcaaac caccgccatg ttgttattat
    18241 tttttgcggc ggtaatcaat tatctcgacc gcagttcgct gtcggtagca aatttaacga
    18301 ttcgtgaaga attgggatta agtgccaccg aaatcggcgc tttgctctcc gtgttttcac
    18361 tcgcttacgg gattgcgcaa cttccttgcg gcccactatt ggatcgtaaa ggcccgcgcc
    18421 tgatgttggg acttgggatg ttcttctggt cactgttcca ggcaatgtct ggcatggtgc
    18481 acagctttac gcagttcgtg ttggtgcgta tcggtatggg aattggtgaa gcgccgatga
    18541 acccatgcgg tgtaaaagtc attaacgact ggttcaacat caaagagcgc ggacgcccga
    18601 tgggcttctt caacgcagct tctaccattg gcgttgccgt aagcccaccg attctggcgg
    18661 cgatgatgct ggtgatgggc tggcgcggga tgtttattac cattggtgta ctggggattt
    18721 ttctcgccat cggctggtat atgctctatc gcaaccgcga gcacgtagaa ctgactgccg
    18781 ttgaacaagc ttatctcaat gcaggtagcg tcaatgcccg ccgagatccg ctcagttttg
    18841 ccgaatggcg cagcctgttc cgtaaccgta caatgtgggg aatgatgctc ggattcagtg
    18901 gcatcaacta cactgcgtgg ctgtatctgg cctggcttcc tggttacctg caaacagcct
    18961 ataacctgga tttaaaaagc acagggttga tggcggctat ccctttcctg tttggggctg
    19021 ccgggatgct ggtcaacggt tacgttaccg actggctggt caaaggggga atggctccga
    19081 ttaaaagccg taagatctgc attattgccg ggatgttctg ttctgccgcc tttacgctga
    19141 tagtaccaca agcgacaaca tccatgacgg cggttctgct gattggcatg gcaccgttct
    19201 gtattcactt tgccggaaca tcctgctggg gcttgatcca cgtcgcagtt gcttctcgca
    19261 tgactgcgtc ggtgggcagt atccagaact ttgccagctt catctgcgcc tctttcgcgc
    19321 cgatcattac tggttttatt gttgatacca cccactcatt ccgtctggca ctaatcatct
    19381 gcggttgcgt caccgcagcg ggagcactgg cgtacatctt cctggttcgt cagccgatca
    19441 acgacccgcg taaagattaa actccctatg cccgataaca ttttgcttat cgggcatttt
    19501 tatggcgatt aaaacgtttc ccagttctcc ccgctatctg ccactgccat tttacgcggc
    19561 gtagctggcg tcacgttttt taccacagcc gatgtttcac gctgctgttg ctgaatccgg
    19621 aacactgcca cagcttcggt caggcgactg gcctgctctt ccagcgcggc ggcggcggca
    19681 gattcttcca ccagcgcggc gttctgttga gttacccggt ccatcccagc aaccgctaag
    19741 ccaacctgat cgataccacg gctctgctca tcagaagcag aagcaatttc gcccataatg
    19801 tccgtcacgc gggtcacggc gctgacaatc tccgccattg tttccccggc gctttcgacc
    19861 agcgtagagc caacatccac tttccccacc gagtcttcaa tcaggctttt aatttcacga
    19921 gccgcctggg cgctgcgctg ggccagatta cgcacttctc ccgcgaccac cgcaaaaccg
    19981 cgcccttgct cacccgcacg cgcagcctca accgccgcgt tcaaagccag aatattggtc
    20041 tggaaggcaa tgccgtcaat tacgctgata atatcggcga ttttctgcga actggtggag
    20101 atatcgcgca tagtctgcac cacgttatct accactttgc cgccgcgttg cgccgtttca
    20161 gaagcactta acgccagatg gctggcctgg cgcgcatttt cggcgttctg cttcaccgtt
    20221 gcggtcagtt gctccatgct ggctgccgtc tcttccagcg aagcggcctg ttgctcggtg
    20281 cgcgaagaga gatcgttatt gccggtggcg atttcgctgg caccgctata gatggcattg
    20341 gccccgttgc gcacatcacc gacggtacgc atcagctctc cctgcatata gcgcaaactc
    20401 tctgccagtt gccccatctc attagagcca tccacctcaa tcggtttcac cagatcgccg
    20461 cctgcaatat gacgaatgct gtcaatcagg cgattcattg gcgctaccag cgaggcttta
    20521 ataccgaacc agacggcgaa gatgaccgcc agtacgacga tcatcacgcc caccagaatc
    20581 cacatcgcct ggctgtagga ggcattgtta tcgctgacgg cgatatcata gagccgatcg
    20641 ttttgctcca tgtaagcaac atactgcttc tcgaaaccgt cctgatatcc ctgggtcggc
    20701 tgatcaaaga actcgttgat tttgcctgca cctaacagtt ggatcagctc cgccagcgca
    20761 ttgtgataaa tatcgtaatt acgtttgatc tctgccgctg cggcggtgct ctgacgcggg
    20821 tcacgcggca acgcttcgta atccgcccag tttttttccg cctgtttcag cgaaatactg
    20881 gcactctgca tcagctcagc aacggttgaa ccgctaccaa tattgttctg atccatcatg
    20941 tagcggatac ccgcgcggtt gagggtgtta cgcgtctgca acaacgcgac ccagctgcca
    21001 ttcagcgtgg attgctgctg gcgaatggtt tgtaaaacag tgaaattttc tttgtcattc
    21061 tttaaggcat taaagaacag accgcctgat gtcagttgta aaaggccaaa aacggccaaa
    21121 accagcagta agctggtcac gatcttgata cgttttaaca tggtttctct ttcctatgga
    21181 ccgatgcaag attttcggcc tggaaagcaa aaactttatg aaaaggtgta aaccgccatc
    21241 catggaaaaa ccaggcgctg gttatcagat actaaaaagt tattcattat cgcccgggat
    21301 ggcttcttgt cgggaattgc ccagagcaat aaattcctct aacagatggg ttaactgttg
    21361 cattttctcg gcagtaaact gagcttcaat ctgccgatag gcttcttcaa tctgtgtctg
    21421 agcgcggtta tacagcgcct gcccctcttt ggtcagcgag atatagagct tccgctgatc
    21481 attgatcggc tttaatcgca acactaaacc gtcgcgttcc atccgcgtga ggatcccggt
    21541 caggcttggg cgcaaaatgc aggcgcgata cgccagatcg tgaaaatcca ttgatgggct
    21601 ttccgccaga atacgcacga tgcgccactg ttgctcagtc aaattatgcc gtttaacgat
    21661 tgggcgaaaa taactcatcg ccgcttctcg cgcctggagc aacgcaatgg ttagtgagtc
    21721 gtgcattatc tttcccctga aaaattcaaa atcattaata tagaaacagt taatcgtcac
    21781 gttaccggga ctgcgctgtc cctgcaattc ctgattttat caaaattgat gatattttat
    21841 taacttactg atatttaata ttttattatc tttaaatgta aatagcttgt taattagatc
    21901 acatttacat cacttacttt tgccaaacta cgcaatcggg aataaaagca atcattaaca
    21961 tattaatgat taagatgatc gaatccgagg agtggtaatg aaaggcacta tcttcgccgt
    22021 agcgttgaac catcgcagcc aacttgatgc atggcaggaa gcgttccagc aatcccccta
    22081 caaagccccg cctaaaactg cggtctggtt tattaaaccg cgcaatacgg tgattggttg
    22141 cggtgaaccg attccctttc cacagagtga aaaggtactg agcggtgcga cagttgcgct
    22201 gattgtggga aaaacggcga cgaaagtacg tgaagaagat gcggcagagt acatcgccgg
    22261 atatgcgctg gctaacgatg tcagcctgcc ggaagagagc ttttaccgcc cggcaatcaa
    22321 agcaaaatgt cgtgatggat tctgccccat tggcgaaacc gtggctctca gcaatgtcga
    22381 taatctgacc atctataccg agatcaacgg gcgtcctgcc gatcactgga ataccgccga
    22441 tttacaacgt aacgccgcac agttgctgag cgccctgagc gaatttgcca cgctgaaccc
    22501 aggcgatgcc attctgctcg gcacgccaca ggcgcgcgtg gaaatacagc caggcgatcg
    22561 cgttcgtgtt ctcgcagaag gtttcccgcc gctggaaaat ccggtagtgg acgaacgtga
    22621 agtgaccacg cgcaagagct tcccaacgct gccacacccg cacggtacgc tgtttgccct
    22681 cggcctgaac tacgccgacc acgccagcga actggaattt aagccaccgg aagagccact
    22741 ggtgttcctg aaagcgtcga ataccctcac tggcgataac cagacctccg tgcgcccgaa
    22801 caatattgaa tacatgcact acgaagcgga gctggtggta gttattggca agcaggcgcg
    22861 taacgtcagc gaagccgatg ctatggatta tgtcgcgggc tacaccgtgt gtaacgacta
    22921 cgccattcgc gactatctgg aaaactacta ccgccctaac ctgcggataa aaagccgcga
    22981 cggactgacg ccgatgcttt caaccatcgt gccgaaagag gcgatcccgg acccgcataa
    23041 tctgaccctt cgcaccttcg tcaacggcga gttacgccag caaggcacca ccgccgatct
    23101 gatcttcagc gtgcccttcc tgatcgccta cttaagcgaa tttatgaccc tgaatccggg
    23161 cgacatgatc gccaccggca caccaaaagg cttatctgac gtggtgcctg gcgatgaagt
    23221 agtggtggaa gtagaaggcg tgggccgcct ggtgaaccga attgtgagtg aggatacagc
    23281 gaaatgaaaa aagtaaatca ttggatcaac ggcaaaaatg tcgcaggtaa cgactacttc
    23341 cagaccacca acccggcaac gggtgaagtg ctggcggatg tggcctctgg cggtgaagcg
    23401 gagatcaatc aggcggtagc ggcagcgaaa gaggcgtttc cgaaatgggc caatctgccg
    23461 atgaaagagc gtgcgcgcct gatgcgccgt ctgggcgatt tgatcgacca gaacgtgcct
    23521 gagatcgccg cgatggaaac cgcggacacg ggcctgccga tccatcagac caaaaatgtg
    23581 ttgatcccac gcgcttctca caactttgaa tttttcgcgg aagtctgcca gcagatgaac
    23641 ggcaagacct atccggttga cgacaagatg ctcaactaca cgctggtgca gccggtgggc
    23701 gtttgtgcgc tggtatcgcc gtggaacgtg ccgtttatga ccgccaccag gaaggtcgcg
    23761 ccgtgtctgg cgctgggcaa taccgcggtg ctgaagatgt cggaactctc cccgctgacc
    23821 gccgaccgcc tgggtgagct ggtgctggaa gctggtattc cggcgggcgt gctgaacgtg
    23881 gtacagggct acggcgcaac cgcaggcgat gcgctggtcc gtcatcatga cgtgcgtgcc
    23941 gtgtcgttca ccggcggtac ggcgaccggg cgcaacatca tgaaaaacgc agggctgaaa
    24001 aaatactcca tggaactggg cggtaaatcg ccggtgctga tttttgaaga tgccgatatt
    24061 gaacgcgcgc tggacgccgc cctgttcacc atcttctcga tcaacggcga acgctgcacc
    24121 gccggttcgc gcatttttat tcagcaaagc atctacccgg aattcgttaa acgctttgcc
    24181 gaacgcgcca accgtctgcg cgtgggcaat ccgaacgatc caaataccca ggttggggcg
    24241 cttatcagcc agcaacactg ggaaaaagtc tccggctata tccgtctcgg cattgaagaa
    24301 ggcgcaaccc tgttggcggg cggcccggat aaaccgtctg acctgcctgc acacctgaaa
    24361 ggcggcaact tcctgcgccc aacggtgctg gcagacgtag ataaccgtat gcgcgtcgcc
    24421 caggaagaga ttttcgggcc ggtcgcctgc ctgctgccgt ttaaagacga agccgaaggc
    24481 ttacgcctgg caaacgacgt ggagtacggc ctcgcgtcgt acatctggac acaggatgtc
    24541 agcaaagtgt tacgcctggc gcgtggcatt gaagcaggca tggtgttcgt caacacccag
    24601 aacgtccgcg acctgcgcca gccgtttggc ggcgtaaaag cctccggcac ctggcgtgaa
    24661 ggcggtgagt acagcttcga agtgttcgcg gaaatgaaga acgtctgcat ttccatgggc
    24721 gaccatccaa ttccgaaatg gggagtctga tatgggtaag ttagcgttag ccgccaagat
    24781 cacgcacgta ccgtcgatgt atctctctga actgccgggg aaaaaccacg gttgccgcca
    24841 gggcgcgatc gacgggcata aagagatcag caagcgttgc cgggaaatgg gcgtcgatac
    24901 cattatcgtt ttcgataccc actggctggt caacagtgct tatcacatca actgtgcaga
    24961 ccattttgaa ggcgtctaca ccagcaacga gctgccgcat tttattcgtg acatgaccta
    25021 caactacgag ggcaacccgg agttggggca gcttattgcc gatgaagcct taaagctcgg
    25081 cgtgcgggca aaagcgcaca atattcccag cctgaaactg gaatacggca cgctggtgcc
    25141 gatgcgctac atgaatgaag acaagcactt caaagtggtc tccatctccg cattctgtac
    25201 cgttcatgat tttgccgaca gccacaagct gggcgaagcg attctgaaag cgatcgaaca
    25261 gtatgacggc accgtggcgg tccttgccag cggttcgtta tcgcaccgct ttattgacga
    25321 tcagcgtgca gaagaaggga tgaacagcta cacccgcgag ttcgaccgcc agatggacga
    25381 gcgcgtggtg aagctgtggc gcgaaggcca gttcaaagag ttctgcaata tgctgctggg
    25441 gatgctcggc tgggataaat acgacggcaa ggtggagttt atcaccgagc tattcccaag
    25501 ctctggcacc ggtcaggtta acgctgtttt cccgcttccc gcgtaaggaa ccaccatgcc
    25561 gcactttatc gtggaatgta ctgaaaatat tcgtgaagaa gcccgcttac ctgagctgtt
    25621 tgccagtgtt aacactgcac tggcggcgac ggggattttt ccgcttgggg gaatacgtag
    25681 ccgggcacac tggatcgata cctggcaaat ggctgatggc aagcacgatt acgcctttgt
    25741 gcatatgacg ctaaaaatcg gcagcgggcg cagtctggaa agccgtcagg aagtgggcga
    25801 aatgctgttt gatctgatta aaacgtactt cgcctcactg atggagagcc gttacctggc
    25861 gctttcattt gagattgcag agctacaccc gacgttgaat ttcaaacaga acaacgtaca
    25921 cgcgttgttt aaataaattt gcaccagctt ccaggccgga tgataaggcg cagccgcatc
    25981 cggcaatgcc acaggatatc gctatgttcg ataaacacac ccacaccctg atcgcccagc
    26041 gtctggatca ggcagaaaaa cagcgcgaac agatccgcgc gatctccctg gattacccgg
    26101 agatcaccat cgaagacgct tacgcggtgc agcgtgaatg ggttcgactg aaaatcgccg
    26161 aaggtcgcac gctgaaaggc cacaaaatcg gcctgacctc gaaagcgatg caggccagct
    26221 cacaaatcag cgagccggat tacggtgccc tgctggatga catgttcttc cacgatggca
    26281 gcgatatccc gaccgatcgc tttatcgtgc cgcgcattga agtggagctg gctttcgtgc
    26341 tggcaaaacc gctgcgtggg ccaaactgca cgctattcga cgtttacaac gccacggact
    26401 atgtaatccc ggcgctggag ctgatcgacg ctcgctgcca caacatcgat ccggaaaccc
    26461 agcgcccgcg taaagtgttc gacaccattt ctgataacgc cgccaatgcc ggggtgatcc
    26521 tcggtggtcg tcccattaag cccgatgagt tggatctacg ttggatctcc gccctgatgt
    26581 atcgcaatgg cgtgattgaa gaaaccggcg tcgccgctgg cgtgctgaat catccggcaa
    26641 acggcgtggc ctggctggcg aacaaactcg caccgtatga cgtacaactg gaagccgggc
    26701 aaatcattct cggtggttcg ttcacccgcc cggttccggc gcgtaagggc gacaccttcc
    26761 acgtcgatta cggcaacatg ggttccatta gctgccgctt tgtttaagga gagaacgatg
    26821 gaaaacagct ttaaagcggc gctgaaagca ggccgtccgc agatcggatt atggctgggg
    26881 ctgagtagca gctacagcgc agagttactg gccggagcag gattcgactg gttgttgatc
    26941 gacggtgagc acgcgccgaa taacgtgcaa accgtgctca cccagctaca ggcgattgcg
    27001 ccctacccca gccagccgat agtacgtccg tcgtggaacg atccggtgca aatcaaacaa
    27061 ctgctggacg tcggcacaca aaccttgctg gtgccgatgg tacaaaacgc tgacgaagcc
    27121 cgtgaagcgg tacgcgccac ccgttatccc cccgccggta ttcgaggtgt gggcagtgcg
    27181 ctggcccgcg cctcgcgctg gaatcgtatt cctgattacc tgcaaaaagc caacgatcaa
    27241 atgtgcgtgc tggtgcagat cgaaacgcgt gaggcaatga agaacttacc gcagattctg
    27301 gacgtggaag gggtcgacgg cgtgtttatc ggcccggcgg atctgagcgc cgatatgggt
    27361 tatgccggta atccgcagca cccggaagta caggccgcca ttgagcaggc gatcgtgcag
    27421 atccgcgaag cgggcaaagc accggggatc ctgatcgcca atgagcaact ggcaaaacgc
    27481 tatctggaac tgggcgcgct gtttgtcgcc gtcggcgttg acaccaccct gctcgcccgc
    27541 gccgctgaag cgctggcagc acggtttggt gcgcaggcta cagcgattaa gcccggcgtg
    27601 tattaatgcc ggatgcgctg cgcttatccg gcctacactc gcaccaaacc gtaggccgga
    27661 taaggcgttt acgccgcatc cggcaaaaag ccgtaccaaa tcgcggaccg gataaggcgt
    27721 tacgccgcat ccgccataaa ccttgtcgta ccctacaaaa atcccattag aggaagaaaa
    27781 atgagcgaca cctcacctgc cataccggag agtatcgatc cggcgaatca gcataaagcg
    27841 ctgactgccg gacaacaggc ggttattaag aagctatttc gccgcctgat cgtctttctg
    27901 ttcgtgctgt ttatcttctc gttccttgat cgcatcaaca tcggctttgc cggactcacg
    27961 atgggacgcg acctcggtct gagcgccacc atgtttggcc tcgctaccac cctgttctat
    28021 gccgcttata tcatcttcgg cattcccagc aacattatgc tgagtattgt cggtgcgcgg
    28081 cgctggatcg ccaccatcat ggtgctctgg ggcatcgcct ctactgccac catgtttgcc
    28141 actggcccca ccagcttgta cgtactgcgt atactggttg gcattaccga agccggcttt
    28201 ctgcctggta ttctgctcta tttaaccttc tggtttccgg cctatttccg cgcccgtgcc
    28261 aacgccttgt ttatggtagc aatgccggta acgacagcgt tgggatcgat cgtttccggc
    28321 tacattttgt cgctggatgg cgtaatggca ttaaaaggct ggcagtggct gtttttgctg
    28381 gaaggcttcc cgtcggtatt actcggcgtc atggtgtggt tctggcttga tgactcaccg
    28441 gacaaagcta aatggctgac gaaagaagac aaaaaatgcc tgcaagagat gatggataac
    28501 gatcgtctga cgctggttca gccagaggga gccatcagcc accacgccat gcaacaacgc
    28561 agtatgtggc gggagatctt cactccggtg gtgatgatgt ataccctggc gtatttctgc
    28621 ctgaccaaca cacttagtgc gatcagcatc tggacaccgc agatcctgca aagttttaat
    28681 cagggcagca gtaatatcac catcggcctg ctggccgccg taccgcagat ttgtaccatt
    28741 ctcgggatga tctactggag ccgtcactca gatcgccgcc aggaacgaag gcatcacacc
    28801 gcccttcctt atttgttcgc tgccgctggt tggttactgg cttcggcaac tgatcacaac
    28861 atgatccaga tgctggggat cattatggct tcgaccggat cattcagcgc aatggcgatt
    28921 ttctggacaa caccggatca gtccatcagc ctgcgggcac gagcgatcgg tattgcggtg
    28981 atcaacgcca ctggcaacat tggttcagcg ttacgtccgt ttatgatcgg ctggttgaaa
    29041 gatctgaccg gcagctttaa cagtggattg tggtttgttg ccgcgctgct ggtgattggt
    29101 gcggggatta tctgggcaat tccaatgcag tcctcccgtc cgcgagcgac cccgtaagga
    29161 acgacgatgt gtgaccgtca gattgccaat attgatatca gcaaaaagta cgatgaaagc
    29221 ctgggcacgg acgatgtgca ttatcagtcc ttcgcccgca tggcggcatt ttttggccgc
    29281 catatgctgc cacatcgcca cgaacagtac tttcagatgc atttcctcaa tagcggacag
    29341 attgagctac agcttgacaa tcatcgctac tcggtggaag cgcccctgtt tgtcctgacg
    29401 ccgccgtcag tacctcatgc gtttattacg gagtctgacg ccgacggtca tgtgttgacg
    29461 gtacgggaag atctgatctg gcccctgctg gaagttcttt atccgagcac tcgggaaacc
    29521 tttggcctgc cggggatttg cctgtcactg gcagataaac ccgacgaact ggcggcgctg
    29581 gaacactatt ggcaactgat agagcgggaa tcggtggaac aactgcctgg acgggaacac
    29641 accctgacgt tactggcaca ggcagtgttc accctactgc tgcgtaacgc aaaactcgac
    29701 gaccatgccg ccagcggaat gcgcggagaa ttaaaactgt tccagcgttt taatatgctg
    29761 attgaaagcc attttcatca gcactggaca gtaccggatt acgctaacga actgcatatc
    29821 accgaatcac gcctcactga catctgccgc cgctttgcca accgtccgcc aaaacggttg
    29881 attttcgaca ggcagctgcg agaagccaag cggctgctgc tgttttctga taacgccgtg
    29941 aacaatattg cctggcaact cggttttaag gatccggctt attttgcgcg cttttttaat
    30001 cgcttagtcg gttgctcgcc cagtgcttat cgcgccaaaa aagtacctgt gacgtgaaaa
    30061 tcccttagcc ttaacgggaa accaggcacc acctgctatt cccctttctc cgcctggagc
    30121 aaggggattt agtaacgtca aaaatagcta aaagcgacct cgatcacaaa accgtacccg
    30181 acctgaaaag taccagccat tgtcccaaaa gtctcttccc gtaatcgccc ctgcaagctt
    30241 caattgaata acaaaaacaa cacacaaaat taacaatcgt attccgatta atactgtaga
    30301 ggtcgacatg aaaccagaag atttccgcgc cagtacccaa cgtccgttca ccggggaaga
    30361 gtatctgaaa agcctgcagg atggtcgcga gatctatatc tatggcgagc gagtgaaaga
    30421 cgtcaccact catccggcat ttcgtaatgc ggcagcgtct gttgcccaac tgtacgacgc
    30481 actgcacaaa ccggagatgc aggactctct gtgctggaac accgacaccg gcagcggcgg
    30541 ctatacccat aaattcttcc gcgtggcgaa aagtgccgac gacctgcgcc agcaacgcga
    30601 tgccatcgct gagtggtcac gcctgagcta tggctggatg ggccgtaccc cagactacaa
    30661 agctgctttc ggttgcgcac tgggcgcgaa tccgggcttt tacggtcagt tcgagcagaa
    30721 cgcccgtaac tggtacaccc gtattcagga aactggcctc tactttaacc acgcgattgt
    30781 taacccaccg atcgatcgtc atttgccgac cgataaagtg aaagacgttt acatcaagct
    30841 ggaaaaagag actgacgccg ggattatcgt tagcggtgcg aaagtggttg ccaccaactc
    30901 ggcgctgact cactacaaca taattggctt cggctcggca caagtaatgg gcgaaaaccc
    30961 ggacttcgca ctgatgttcg ttgcgccaat ggatgccgat ggcgtcaaat taatctcccg
    31021 cgcctcttat gagatggtcg cgggtgctac cggctcgccg tacgactacc cgctctccag
    31081 ccgcttcgat gagaacgatg cgattctggt gatggataac gtgctgatcc catgggaaaa
    31141 cgtactgatc taccgcgatt tcgatcgctg ccgtcgctgg acaatggaag gcggttttgc
    31201 ccgtatgtat ccgctgcaag cctgtgtgcg cctggcagtg aaactcgact tcattacagc
    31261 actgctgaaa aaatcactcg aatgtaccgg caccctggag ttccgtggtg tacaggccga
    31321 tctcggtgaa gtggtggcgt ggcgcaacac cttctgggca ttgagtgact cgatgtgttc
    31381 tgaagcgacg ccgtgggtca acggggctta tttaccggat catgccgcac tgcaaaccta
    31441 tcgcgtactg gcaccaatgg cctacgcgaa gatcaaaaac attatcgaac gcaacgttac
    31501 cagtggcctg atctatctcc cttccagtgc ccgtgacctg aacaatccgc agatcgacca
    31561 gtatctggcg aagtatgtgc gcggttcgaa tggtatggat cacgtccagc gcatcaagat
    31621 cctcaaactg atgtgggacg ccattggcag cgagtttggt ggtcgccacg aactgtatga
    31681 aatcaactac tccggtagcc aggatgagat tcgcctgcag tgtctgcgcc aggcacaaag
    31741 ctccggcaat atggacaaga tgatggcgat ggttgatcgc tgcctgtcgg aatacgacca
    31801 gaacggctgg actgtgccgc acctgcacaa caacgacgat atcaacatgc tggataagct
    31861 gctgaaataa cgcagcagga ggttaagatg caattagatg aacagcgcct gcgctttcgt
    31921 gacgcgatgg ccagcctgtc ggcagcggta aatattatca ccaccgaggg cgacgccgga
    31981 caatgcggga ttacggcaac ggccgtctgc tcggtcacgg atacaccacc atcgctgatg
    32041 gtgtgcatta acgccaacag tgcgatgaac ccggtttttc agggcaacgg taagttgtgc
    32101 gtcaacgtcc tcaaccatga gcaggaactg atggcacgcc acttcgcggg catgacaggc
    32161 atggcgatgg aagagcgttt tagcctctca tgctggcaaa aaggtccgct ggcgcagccg
    32221 gtgctgaaag gttcgctggc cagtcttgaa ggtgagatcc gcgatgtgca ggcaattggc
    32281 acacatctgg tgtatctggt ggagattaaa aacatcatcc tcagtgcaga aggtcacgga
    32341 cttatctact ttaaacgccg tttccatccg gtgatgctgg aaatggaagc tgcgatttaa
    32401 gctccagccc cttcacgcat tcgtcgaagg ggcattttta ttgtgatctc aatcacatat
    32461 ccacccgatg aataattctt gcccaaccgc tcaccgccat tcctgaccgc ttacgtccct
    32521 aaaataacca ctcagttatt taccttactt tacgcgcgcg taactctggc aacatcactg
    32581 caggatagcg gtcaatttac ctcctcaaac gcaacgcaaa cctagaacgg cttcggccta
    32641 tgattaacaa attactctat gaattttggt ttgcaggaag gcagcaagtg agtgaatccc
    32701 cgggagctta caacagtaag tgacaggggt gaacgaacgc aactgccgca cctgtaagcc
    32761 aaaagacgac gagtaaaatg ccaggtttta ctatggatac gaaaaaacta ttcaagcaca
    32821 taccctgggt gattctcgga atcatcggtg cattctgcct cgcggtagtt gcattacgtc
    32881 ggggggagca cgtcagcgcc ctgtggatcg tggtcgcctc tgtgtcggtg tatctggtgg
    32941 cgtatcgcta ctacagtctg tacatcgccc agaaggtgat gaaactcgac cccacgcgcg
    33001 cgacgcctgc ggttattaac aacgacggtc tgaactacgt tccgaccaac cgttacgtgt
    33061 tgtttggtca ccacttcgcc gctatcgccg gtgctggtcc gctggtcggt ccggttctcg
    33121 ccgcacagat gggctacctg cctggcacgc tgtggctgct ggcgggggta gtactggccg
    33181 gtgcggttca ggactttatg gtgctgttta tctcctctcg ccgtaacggc gcatctctcg
    33241 gtgagatgat caaagaagag atgggaccag taccggggac tatcgcgctg tttggctgtt
    33301 tcttaatcat gatcatcatc ctcgccgttc tggcgctgat tgtggttaaa gccctggccg
    33361 aaagtccgtg gggtgtcttc accgtttgct caaccgtacc gattgcgctg tttatgggta
    33421 tctacatgcg ctttatccgt ccggggcgtg tgggtgaagt ctctgtcatt ggtatcgtgc
    33481 tgctggttgc ctctatctac ttcggtggcg tgattgctca cgatccgtac tggggtccgg
    33541 cactgacctt taaagacacc accattacct tcgcgctgat tggctatgcg tttgtttccg
    33601 cactgctgcc ggtgtggctg atactcgcac cgcgcgacta tctggcaacc ttcctgaaaa
    33661 tcggcgttat cgtcggcctg gcgctgggta tcgtggtgct gaacccggaa ctgaaaatgc
    33721 ctgcgatgac ccagtacatt gacggtactg gcccgctgtg gaaaggtgct ctgttcccgt
    33781 tcttgttcat taccatcgcc tgtggtgcgg tatctggctt ccacgcactg atctcttccg
    33841 gtacgacgcc gaaactgctg gctaatgaaa ccgacgcgcg tttcattggc tacggcgcaa
    33901 tgctgatgga gtccttcgtg gcgattatgg cgctggttgc tgcatccatc atcgaaccgg
    33961 gtctttactt cgcgatgaat accccacctg ctggccttgg catcaccatg cctaacctgc
    34021 atgaaatggg tggcgagaac gcgccgatca tcatggcgca gctgaaagac gttaccgcac
    34081 acgcggcagc gacagtcagc tcctggggct tcgtgatttc gccagagcag atcctgcaaa
    34141 ccgcgaaaga cattggtgag ccttctgtcc tgaaccgtgc aggtggtgcg ccgacgctgg
    34201 cggtaggtat cgctcacgtg ttccacaaag tgttgccgat ggctgacatg ggcttctggt
    34261 atcacttcgg tattctgttc gaagccctgt tcatcctgac cgcgctggat gcgggtaccc
    34321 gttctggtcg ctttatgctg caagacctgc tgggtaactt catcccgttc ctgaaaaaaa
    34381 ccgactctct ggttgccggt atcatcggta ctgcgggctg tgtgggtctg tggggctacc
    34441 tgctgtatca gggcgtggtc gatccgctgg gcggcgttaa gagcctgtgg ccgctgttcg
    34501 gtatttccaa ccagatgctg gcagccgtag cgctggtact gggcaccgtt gtgctgatta
    34561 agatgaagcg cacccaatac atctgggtaa ctgttgttcc ggctgtatgg ctgcttatct
    34621 gcaccacctg ggcgctgggc ctgaaactgt tcagcaccaa cccgcagatg gaaggcttct
    34681 tctacatggc aagccagtac aaagagaaga ttgctaacgg tactgacctg acggcgcagc
    34741 agattgccaa catgaaccac atcgttgtga acaactacac caacgcgggc ctgagtattc
    34801 tgttcctgat tgtggtgtac agcatcatct tctacggttt caaaacctgg cttgcggtgc
    34861 gtaacagcga caaacgtact gacaaagaaa caccgtacgt tccaatcccg gaaggcggcg
    34921 tgaagatctc ttcgcaccac taaccggttg ccggatgcgc tgcgcgtatc cggcctacaa
    34981 agtgtctatc gtaggccgga taaggcgttt acgccgcatc cggcaaatcc ctagcccgga
    35041 ccttccgggc tttacgcata tctggaaggc aaaatgtttg gtaacttagg acaggcaaaa
    35101 aaatatctcg gccaggcggc gaagatgttg attggcattc cagactacga caactacgtc
    35161 gagcatatga agaccaacca tcccgacaag ccgtacatga gctatgaaga attcttccgc
    35221 gaacgccaga acgcgcgcta cggcggcgat ggtaaaggcg gtatgcgctg ttgttaatgg
    35281 agagagcatg aacccgattg cagttaccct actcaccggt tttttaggcg cgggcaaaac
    35341 caccctgctg cgccatattc ttaacgaaca acacggctac aagattgccg tgattgaaaa
    35401 cgaattcggc gaagtctccg ttgatgatca actgattggc gaccgcgcca cgcagatcaa
    35461 aacgctgacc aacggctgca tctgctgttc gcgctccaac gagctggaag acgcactact
    35521 cgacctgctg gataatctcg acaagggcaa tattcagttc gaccgtctgg tcattgaatg
    35581 caccggcatg gccgatccca gcccgattat tcagaccttc ttctcccatg agattttatg
    35641 ccagcgctac ctgctggacg gggtgattgc gctggtggat gcggtacatg ccgatgagca
    35701 gatgaaccag ttcaccatcg cccagtccca ggtgggctac gccgaccgta ttctgctgac
    35761 taaaaccgac gtcgcaggcg aagcagagaa actgcgtgaa cgcctggcgc gcatcaacgc
    35821 ccgtgcaccg gtctacaccg tcacccacgg cgacatcgac ctgggcctgc tgttcaacac
    35881 caacggtttt atgctggaag aaaacgtcgt cagcaccaaa ccgcgtttcc actttatcgc
    35941 ggataaacaa aacgatattt cgtcgattgt ggtggaactg gattacccgg tagatatcag
    36001 cgaagtttcc cgggtgatgg aaaacctgct gctggaatcg gcggataaac tgctgcgtta
    36061 caaagggatg ctgtggattg acggcgaacc taaccgcctg ctgttccagg gcgtccagcg
    36121 cctctacagc gccgactggg accgcccgtg gggcgatgaa aaaccgcata gcacgatggt
    36181 gtttatcggg attcagttgc cggaggaaga gattcgggcg gcgtttgcgg ggttgaggaa
    36241 gtaagttcgg gaaagatcaa ctttttgaga gttccaccgc aacattatta cgagtggaac
    36301 tctttagata tgtcagacca accaaagctt cttcaattgc gttttcattt tttcatgtct
    36361 cattttcagt tcagccaatc cccattctga agaattacaa acatcttttg ttaaatcaaa
    36421 agagctttta ctattaagtt tctcataaat agatttcttt ttgataaaat catagtgttg
    36481 tgcttcagaa tttttggaac cacttatgag tgttaaatta cctattttat gcagccagta
    36541 gacatgctct tgaggttgga atctattaat ccagtattca ttaactaatg cttgaggaag
    36601 aatatgctca attgtgattc tccccgtata ggttttaatc acgctctcat cttgttgctc
    36661 catatctaag cgaagcaaaa ttgcttttat taagttcact tgattcggac gaggctcata
    36721 taaatcttca tccagagcag ctataaaacc tgaattatct gcatgctggt ttatctgatt
    36781 tatcacagaa tcaaaaggca tatcattatt tattgctacc agagctgaat aacaaaccat
    36841 ttctctttgg cttttaattt gtttttttaa ccacccatgc atatatacct tctcaaaggc
    36901 ggtaataaat tgagaaaaat catctaaatt aaaatcttct gtacgagcca ttcgattcat
    36961 gaatgccata atcggaggaa tccactcatc tacccctaaa ttacttagcg atgctatttt
    37021 tcgtcgtatt gaagggtgtt caaaatcatt ctctaaaatc ttagtataat tttttgcaga
    37081 attaaccaac atcagtgaca tagcaatagc atctccatca aattgctgct ggagattttc
    37141 aataaaagct tcaaaacctt tttgtaacac cctgtcacga tcttttttct cggaaagctt
    37201 atgaagagtt agaaatttat caagccgtct cactccaacc atatcttcaa tttgcgacca
    37261 tgctgattct atttgctctg attttttatt atgcgtagaa gctgattcaa acagtgcatt
    37321 ttttaaaaga tctgcattac ttaaaggtaa acctcgacta tttaatacat taaaaatgtc
    37381 taaatgatga tgcgaaatca tcagtttgca caaatacgat atatacattt tgcaaaatat
    37441 atttagcaag caacttcaac tcatcaacag ataaccgcaa caaataatct ctaattgtct
    37501 ctgcgttgct aatgaatact aactcagtat ccgatggttt ttcaggttta taatctttag
    37561 aatcctgcag tatataatat ttataaagat catactcttt ttttctaaca attagtcttg
    37621 gttcatctgt ttcatcagaa taaacatcaa taggcagaac tcttttttgc aaatcatctt
    37681 ttatcccctg aatcgggatg atttttttta gctcggagac aataatgctt aacgttgtaa
    37741 gacgttgttg tccatctaca acttcatact gattttgccc tttattgata caaatcatac
    37801 tcccaataaa atattcattc tcttctgatt gagagctttt ataaatgtca tcaatgagtt
    37861 gctctgcatt atctaccgtc caactgtaag gacgctgata agaaggaata ataaactttt
    37921 tgttttcagt aaggatatcc tgcaccttac attctttagc ttccatttca tatacccaat
    37981 caaacaatca acaataacat tatctttctt gctcgaaaga aacgcaacta taagattttt
    38041 atatattttg ttagagttga tacggttcct gtaacttctg tttatctgtc tctgatatgc
    38101 ccagattaat tcaagcaaga tataacagag atatcaatgt gatctctgct acgtacttta
    38161 cgttgaaaca ccgccctaaa tcatagccag tctattgatt ttatgtacaa tcagaatcgt
    38221 cctgataaaa gcgagaacac cccatggcgg aactgaacct aagtaacctg acggaagcag
    38281 acatcattac caaatgcgtt atgccagcca ttctcaatgc aggctgggac aacacaacgc
    38341 aaatcagaca ggaggtcaaa ctccgggacg gtaaagtcat cgtacgtggt aaagttgcgg
    38401 cacgcagaac ggtaaaatct gctgacatcg tgctgtatca caaaccaggc attcccttag
    38461 ccgtgattga agcaaaagcc aacaaacatg aaattggcaa agggatgcaa cagggcatta
    38521 aatatgcacg cctgctggac gttccttttg tttttgccac caacggtgat ggctttatct
    38581 tccgcgatgc caccgcagcc gaaggtgaat gccttgaaaa gcaaataacg ctggatgact
    38641 tcccctcccc cgctgaactc tggcaaaaat tctgcctctg gaaaggatac acacaagctc
    38701 agcttccggt gattactcag gactattacg acgatggcag cggtaaatcg ccacgttatt
    38761 accagcttca ggcaatcaac aaaaccattg aagccgtctc caacgggcaa aaccgcgttc
    38821 tgctggtcat ggcgaccgga acagggaaaa cctataccgc attccagatc atctggcgcc
    38881 tgtggaaatc aaaaaataaa aaacgcattt tgttccttgc cgatcgcaac attctggtcg
    38941 accaaaccaa aaataatgat ttccagccat ttggtacggc aatgaccaaa gtcagcggac
    39001 gcaccattga tcccgcttat gaaattcacc tcgcgctcta tcaggctata actggcccgg
    39061 aggaagatca aaaagcgttt aaacaagtcg caccagattt cttcgatctg atcgtgatcg
    39121 acgaatgcca tcgcggcagc gcatccgaag acagcgcctg gcgagagatc cttgattatt
    39181 tcagttccgc cacccaaatt ggcttaaccg ccacgccaaa agagacgcat gaagtctcca
    39241 gcacggatta cttcggcgat ccggtttacg tctactcgct aaaagaaggg atcgaagacg
    39301 gcttcctcgc cccttataaa gttgtccgtg ttgatattga tgttgatctg caaggctggc
    39361 gcccaaccaa agggcaaact gacttaaacg gcgaagtgat cgacgatcgt atctataacc
    39421 agaaagattt cgatcgcacg atggtaatcg acgaacgcac agaactggtt gccagaacca
    39481 ttaccgacta cctcaagcgc accaatccga tggataaaac catcgtcttc tgtaacgaca
    39541 tcgatcatgc agaacgtatg cgccgcgccc tggttaatct caacccggag caggtgaaaa
    39601 agaacgacaa atacatcatg aaaatcaccg gcgatgatga aattggcaaa gctcagttgg
    39661 ataacttcat caacccgaaa aaaccgtacc cggttatcgc gaccacttca gagctgatga
    39721 ccaccggtgt ggatgctaaa acctgcaaac tggtagtact ggaccagaac atccagtcga
    39781 tgaccaaatt caagcagatt atcggtcgtg gtacacgcat cgacgaacgt tacggcaaac
    39841 tctggtttac catcctcgac tttaaaaaag ccaccgaact gtttgccgat gagcgtttcg
    39901 atggcattcc cgaaaaagtc atggatacca caccagagga tatcgccgat ccagaatctg
    39961 attttgaaga gaaactcgaa gaaatcagcg aacatgacga agaacaggta acaggcgttg
    40021 atgaaccgcc tgcgccacca taccaggtta ccgataccga tgatgtcggc ccacttccgg
    40081 aagaagacga gaagaaaatc cgcaagtttc acgtcaacgg tgtagcggtg ggcgttattg
    40141 cacagcgcgt tcagtattac gacgccgacg gtaaactggt taccgaatcc tttaaagatt
    40201 acacccgcaa aacactgctc aaagaatatg cctcgctgga tgattttacc cgcaagtggc
    40261 aggatgccga tcgcaaagaa gcaatcattc acgagctgga gcaacagggg atcatctggg
    40321 aagtactggc agaagaagtc ggtaaagatc tcgatccatt cgacatgctt tgccacgtag
    40381 tgtatggtca gccgccgtta acccgcaaag agcgcgccga gaacgtgcgc aagcggaact
    40441 acttcacaaa atactctgaa gcagcgcaag ccgtgctcga taatctgctg gataaatacg
    40501 ccgatgcggg cgtacaggag atcgaaagta ttcaggtgct gaaacttaaa ccattcgaca
    40561 gcatgggcac cctaccggag attattaaaa ccggatttgg cgaccgtaac gggtataatc
    40621 aggcgctcag cgagctggaa aacgaaatct accaattacc gccccgctct gcttaacaac
    40681 tctcttttgt gccttctgca accaacatgt tgcagaaggc cttgtttttc atggaataca
    40741 acatgtctat cagttcagta atcaaatcat tacaagatat tatgcgcaaa gatgccggtg
    40801 tggacggcga tgcgcagcgt ctcggtcagc tctcctggct gctgtttttg aaaatcttcg
    40861 atgcccagga agaggcgctg gaactggagc aggataacta tcaatatccg atcccacagc
    40921 gttatttatg gcgcagttgg gccgcaaacg ctcagggcat taccggtgat tccctgctgg
    40981 aattcgttaa tgatgatctg ttcccggcgt tgaaaaacct cactgcgcct atcgataaaa
    41041 acccacgcgg ctacgtggtg aagcaggcgt tcagcgatgc ctataactat atgaaaaacg
    41101 gtacgctact gcgtcaggtg atcaacaagc tgaacgaaat tgactttacc agcgccagcg
    41161 aacgccatct gtttggtgat atttacgaac agatccttaa agatctgcaa tctgcgggca
    41221 atgcgggcga attctatact ccacgcgccg tcactcgctt tatggtggat cgcgttgatc
    41281 cgaaactcgg cgaatccatt atggacccgg cctgcggtac gggcggtttt cttgcctgcg
    41341 cgttcgatca tgtaaagaac aaatacgtga agagcgtcgc cgatcatcag acactgcaac
    41401 aacagatcca cggtgttgag aaaaaacagc ttccgcacct gctggcgacc accaatatgc
    41461 tgctgcacgg cattgaagta ccggtacaaa ttcgtcacga caacaccctg aacaaaccgc
    41521 tttcctcctg ggatgaacaa ctggatgtca ttgttaccaa cccgccgttt ggtggcacgg
    41581 aagaagacgg tattgagaag aactttccgg cagagatgca aacccgcgaa acggcggatc
    41641 tgttcctgca actgattgtg gaagtactgg cgaaaaacgg tcgtgcggcg gtggtattgc
    41701 cggatggcac actatttggc gaaggcgtta aaaccaaaat caaaaagcta cttaccgaag
    41761 agtgcaacct gcataccatc gtgcgcttac cgaatggtgt gtttaacccc tataccggca
    41821 ttaaaaccaa cctgttgttc tttaccaaag gtcagccaac caaagagatt tggttctatg
    41881 agcatccgta tccggcgggc gtgaaaaatt acagtaaaac caagccgatg aagtttgaag
    41941 agtttcaggc ggaaatcgac tggtggggga acgaggccga tggttttgcc agccgcatcg
    42001 agaatgagca agcgtggaaa gtcagcattg atgacgtgat tgcgcgtaac ttcaatctgg
    42061 atattaaaaa cccacatcag gcggaaaccg tcagccatga cccggacgaa ctgttagcgc
    42121 agtatgcaaa acagcaggcg gagatccaga cgctgcgtaa tcaactgcgc gatattcttg
    42181 gcgctgcgct gtctggcaag gaggttaact aatgagtgtg gaaaagctga tcgttgatca
    42241 tatggaaacc tggacctcgg cgttgcaaac ccgttccacc gccgggcgcg gcagttccgg
    42301 taaaattgat ttgtatggca ttaagaaatt acgtgagctg attctggaac tggcagtgcg
    42361 cggtaaactg gtgccgcagg atccgaacga tgaaccggcg tcggagctgc tgaagcgtat
    42421 tgcggcggaa aaagcagagc tggtgaagca aggtaaaatt aaaaagcaaa aaccactgcc
    42481 ggaaattagc gaggaagaga agccgtttga attgccggag ggatgggagt gggtgcgggt
    42541 tgcagatctc atggaggtta ttaacggtcg agcatataaa aaacatgaaa tgcttcaaac
    42601 aggcactcct ttgctgcgtg ttggtaatct attcacatca aatgagtggt attactctga
    42661 cctccaatta gacgaaaaca aatatataaa taatggtgat ttaatatacg cttggtccgc
    42721 atcttttggg ccattcattt ggacaggaga aaaagtaatt tatcactacc atatatggaa
    42781 attaaattta tttgcagaag agtactcaaa caaatatttt atacatgatt ttcttttatc
    42841 cattacagat aaaataaaat cgcaaggtaa cggtattgca atgctccata tgactaaaga
    42901 aaaaatggaa caacagataa tcgctttacc gcctataaat gaacaacaac aaattgtcag
    42961 aaaaatcaga gaacttacag ttctctgcga ccaactggaa cagcaatccc tgaccagtct
    43021 ggacgcacat cagcaactgg ttgaaaccct gttgggaaca cttacagaca gccaaaacgc
    43081 caaggaactg gctgaaaact gggcgcgtat tagcgagcat ttcgacaccc tatttaccac
    43141 cgaagccagc gtggatgcgt taaaacagac cattcttcaa ctggccgtaa tgggtaaact
    43201 tgtgccgcag gatccgaatg acgaacccgc ctctgaactg ctcaaacgaa ttgcgcagga
    43261 aaaagctcaa ctggtgaaag aagggaaaat aaaaaaacaa aaaccactac cgccaattag
    43321 cgatgaggaa aaaccgtttg aactgccgga agggtgggag tggtgtaaat ttggtttaac
    43381 atcagagttt ataaatggcg atcgtggaag taattacccc aataaaaatg agtatgtttc
    43441 tcaaggtatt ccttggatca atactggaca tatagaaaaa aatggtacac ttacggttac
    43501 agaaatgaat tttataaccg aaggaaaatt taatgaatta agaagtggga aaattcaaaa
    43561 aggtgatttg gtttattgcc tacgaggagc aacttttggt aaaactgcct ttgtaacccc
    43621 ctatgaaaca ggagctattg cctcatcact aatgatcatt agaccattta tcacagaaat
    43681 gggagggtat atttataatt atttaaccag tccatttggg cgctcacaga tttaccgctt
    43741 tgataatggc tcagcacaac ccaacctatc agcaaatagt gtaatgttgt attcattccc
    43801 atgcccacca ttaactgaac aatatagaat attttcacaa gtaggtttac ttcatgaact
    43861 atgcgataag cttaaaactc gtataaaaac cgcccaacaa acccaactgc accttgcaga
    43921 cgcactgact aacgcggcga taaactaatt ttctcgccct cataaaacca ataaagcggc
    43981 tcaatagccg ctttattcac atcaccaaaa attatatttc acgctaactt tcatcttatt
    44041 ttcattaatt tttagctgga ctttccctat atttactgat gatatgtcca agtatttagc
    44101 gcggtgcgga tgtgcgccaa cacacccgca ccgctcatca caatcactat tatcggagaa
    44161 tagcagttat gactgacacg cattctattg cacaaccgtt cgaagcagaa gtctccccgg
    44221 caaataaccg tcaattaacc gtgagttatg cgagccgcta cccggattac agccgtattc
    44281 ccgccatcac tctgaaaggt cagtggctgg aagccgccgg ttttgccacc ggcacggcgg
    44341 tagatgtcaa agtgatggaa ggctgtattg tcctcaccgc tcaatcaccc gcccccgaag
    44401 agagcgaact gatgcagtcg ctgcgccagg tgtgcaagct gtcggcacgt aaacaaaggc
    44461 aggtgcagga gtttattggg gtaattgctg gtaaacagaa agttgcctga taaattgacc
    44521 cggtagcgcc agtgctaccg ggtattattc gccacgttat accaacgcgc tctccatctg
    44581 tttttcaaat gcctgacgaa ttaatcccat aatgtaagga agttgtgcga ggtcactgaa
    44641 accaatttcc acatcaccat tgccccagcg cccaacattt gtcacatctt tggcaatacc
    44701 tttcggatcg accagttcat gaaactgcat attaagcgac aatcgcagtc ggcttttttg
    44761 cggcacaaca tcaacaaaat tcgtttcagc tttaaacgca atatagagct ttaaaacttc
    44821 ctgcgtgatc cctgcgtcca ggcgcataac ttcatcgcga agatgatcaa ataacacccg
    44881 gctatgcgaa ccatcagcaa gaaaaggata atcactcagg ctgtaactgg ttttgttctc
    44941 cggctgcgcc cgataaacag ctaaaacctc ttcaggaaga gcaggcgctt gccagacctg
    45001 aaccgcaaca tcggccagac gatcggctcg ggcgtgaatg gcggcttcat cccatttttc
    45061 gcactgtcca agaccgatat tcaaatagag cgggctatgt ttaaagccgt cttcaatatc
    45121 gcgtttttcc gcgaaaggtc tgtcactgta acgggagtta tagcgcgtta aagtgagatt
    45181 ccccaacgta tgcaacaatt ctttatgaat acgctgccag tcgcttccca gctcttcgcg
    45241 ccatttagcc gacagatttt cgttctgcgg cataatatgc tcaatagtaa actcttctac
    45301 gcgttctctg cgtttatcgt tttccagtcg tcgtaaccag tagctgcggc tgcggaagtt
    45361 atagagatcg cgcactttta attcccgttt aaattcatca tcgttgggga aacgacgata
    45421 tgaaggcagg ttcataaaat gtacctgaat actttccaga tatttttctt tattaatgac
    45481 cttataaaaa gtggcaaacg tcttgttaag agaattcgtc ggaatcgcac atactgcacg
    45541 gcggaaaaca taagattcaa ttaaacgaat tatgctcagg aaatcttcgt gagacaaatc
    45601 gtcattttta tagtcatgat aaagcgccag taagaaagga tacgccacat caacctttaa
    45661 ctcgcgcaaa tcctgaaaag ccgtagcaag cgatttgtca ctttcttttc ccaatgccat
    45721 tgcacagtaa tactccgcgt agatatgaat atcttcaacc agccgatcta cgcctttttc
    45781 agcaacactc tggctgcggg catggagttt aaatgcctca tagacttcat ctgtccgagg
    45841 gatctccccc gtttttaccg tcagataatg acgcataaaa ctgtcaaaat attcgctgta
    45901 accttgctga ccaaaggcga cttccattgg acgccagtga tcttcataca accgggtttg
    45961 atgctctggt tcgaggccca tcagaataaa attgcgcacc agatcggcct gacttaacgc
    46021 cttaccggtg gagttcatac tttcaaaaat cagttgcgga ttatcctgac cacgattaag
    46081 cgccacatcg acaattaata actttgctaa cccacgacat aaggggatca agtcatcacc
    46141 gagtttggca atttgttcat caaagaaagt aaagttttcc attattcgat gggaatagtt
    46201 ttctggcatt ggtctttgtt ttattaacgc cagcaaactg tctttatcag tctcggtcag
    46261 cagtaattta aatcctttct caccggactc ataaggattg agcaaataat aattacgcaa
    46321 tttcattgct gaaaagccat caaaaacttc gtcttcgcca agatggcgcg ataaagcctc
    46381 aatcagcaac attgcggtcg tcagccgttg ttgaccatca atgaccagta acggagaaat
    46441 accagaaacc tgatacaacc cctgctcaat ataaacaacc gaaccgataa aatgcgctga
    46501 tatatcgtca cgctttccgg cacgaatgat gtcgtcccaa agttgccgac attgttgttc
    46561 tgtccatgaa taagtccgtt gataaatggg aataacaaac tgctgcgaac gttttaaaaa
    46621 atcgagtagg cgggcttctg tagctttcat tctgacgtct ttccgtgaag cgatgatttc
    46681 gcaataataa ccacttcctt gtggaggtta tagagaaatc ctgtttatcc gcgatgaatt
    46741 gccccctcac tccacatcct ccctgcgtaa cccaatatcc ctcaaccgct catcactcat
    46801 ctgctgtaac actcgtcggg cctgcatttg ccgccgccaa cgcctcaccg cctgccaaaa
    46861 ttgcacaagt ctgataaacg gcgttttggc tttgttttcg tgaaattcca tctgctgcct
    46921 cctcatcttt cagaggcttc atcatctgcc ttctggcagt tcacaataca gatgcaaata
    46981 ttagttttat ttaacataca gacaggttaa aacagcatct gcatccggtt ttttagcctc
    47041 atctgtaccg gtttttctct ctgtatggtc caaataagga acacagcatg acgcgttatc
    47101 aacatctggc gactctactt gccgagcgga ttgagcaggg gctgtatcgt cacggggaga
    47161 aattgccgtc ggtgcgcagc ttaagtcagg agcacggcgt cagcatcagc accgtgcagc
    47221 aggcgtacca gacgctggaa acgatgaagc tcatcactcc gcagccgcgt tcgggttatt
    47281 ttgtcgcaca acgtaaagcc cagccgcctg taccgccgat gacgcgtccg gtgcagcgcc
    47341 cggtggaaat tatccagtgg gatcaggtgc tggatatgct ggtggcgcat agcgacagtt
    47401 ccattgttcc gttaagcaaa agcacgccgg atgtcgaaac gcccagcctg aaaccgctct
    47461 ggcgggagct aagccgggtg gtgcagcata atctgcaaac cgtgctcggt tatgacttgt
    47521 tagccggtca gcgggtattg cgagagcaga ttgcccgcct gatgctcgac agcggctcgg
    47581 tggtcaccgc cgatgacatc atcatcacca gcggctgcca taactcgatg tcgctggcgt
    47641 taatggcggt gtgtaaaccg ggcgatattg tcgcggtcga atctccctgt tattacggtt
    47701 cgatgcagat gctgcgcggc atgggcgtga aagtgattga aatcccaacc gatccagaaa
    47761 ctggcatcag cgttgaagcg ctggaacagt ggccgattaa aggcatcatt ctggtgccaa
    47821 actgtaataa tccgctggga tttattatgc cggacgcgcg caaacgggcc gttctctctc
    47881 tcgctcagca tcatgatatt gtgatttttg aagatgatgt ctatggcgaa ctggcaacgg
    47941 agtatccgcg cccgcggacc attcattcct gggatatcga cgggcgagtg ctgctgtgca
    48001 gttcgttcag taaaagcatt gcacctggcc tgcgtgtggg ctgggtcgca ccggagcgtt
    48061 atcacgataa actgctgcat atgaaatatg ccatcagc
//
LOCUS       DAJVTL010000015        48060 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.015, whole genome shotgun sequence.
ACCESSION   DAJVTL010000015 DAJVTL010000000
VERSION     DAJVTL010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 48060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48060
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.015"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..1184
                     /locus_tag="OQQ26_000829"
                     /pseudo
     CDS             1..1184
                     /locus_tag="OQQ26_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001659238.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DKNYY family protein"
     gene            1181..2506
                     /locus_tag="OQQ26_000830"
     CDS             1181..2506
                     /locus_tag="OQQ26_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001584058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DKNYY family protein"
                     /protein_id="HCS1856387.1"
                     /translation="MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYGE
                     DEKIIAQFPKMNRADLRLVTNISGERELVEGYIPTDEISIKNEEYHWVTDGRVILWRG
                     KIVSNPPGTPTVDIASFQSIGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNS
                     TTLVDSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYL
                     NGVHLTANADSFEIIRWIPHSLLVFRDNKGMHRYPFGQLPGKAIPVDDDVSFEVGESR
                     VRWRKQLTPDRQWSKWIDLPGIEPEQFHLITGNIAQYKDRLYVTKLSTFGEDQLEIIQ
                     LDTPDLVIDHSFNSGKQHAYFIRQLRSKSVQIIPVNGLLTKNDRFAYDERNVYTWTNT
                     EVRITPSPCPAKTRVREENVREVQNRDIIIPVTDESCRNAAAEVQTLKP"
     gene            2554..2874
                     /gene="cyaY"
                     /locus_tag="OQQ26_000831"
     CDS             2554..2874
                     /gene="cyaY"
                     /locus_tag="OQQ26_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HCS1856388.1"
                     /translation="MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGET
                     VSFR"
     gene            complement(2914..5460)
                     /gene="cyaA"
                     /locus_tag="OQQ26_000832"
     CDS             complement(2914..5460)
                     /gene="cyaA"
                     /locus_tag="OQQ26_000832"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HCS1856389.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTL
                     YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVC
                     EKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLY
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEG
                     IIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKVDGREQVIPFRTKSIDNMPPANQDHDTPLLQQYFS"
     gene            5847..6788
                     /gene="hemC"
                     /locus_tag="OQQ26_000833"
     CDS             5847..6788
                     /gene="hemC"
                     /locus_tag="OQQ26_000833"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HCS1856390.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE
                     DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD
                     NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAA
                     LNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER
                     RGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA"
     gene            6785..7525
                     /gene="hemD"
                     /locus_tag="OQQ26_000834"
     CDS             6785..7525
                     /gene="hemD"
                     /locus_tag="OQQ26_000834"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HCS1856391.1"
                     /translation="MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLA
                     DQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPQLPTYFAIGRTTALALHTVSGQK
                     ILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTVRGAEVTFCECYQR
                     CAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERL
                     AKLARELGWQDIKVADNADNDALLRALQ"
     gene            7547..8734
                     /gene="hemX"
                     /locus_tag="OQQ26_000835"
     CDS             7547..8734
                     /gene="hemX"
                     /locus_tag="OQQ26_000835"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HCS1856392.1"
                     /translation="MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAI
                     AIALAAGVGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLK
                     QANRQQETLAKQLDEVQQKIATISSSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRL
                     ADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQD
                     IYLRENIRSRLLVAAQAVPRHQQETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQL
                     SQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGATEAKPAPAPAPQADTPAAAP
                     QGE"
     gene            8737..9933
                     /gene="hemY"
                     /locus_tag="OQQ26_000836"
     CDS             8737..9933
                     /gene="hemY"
                     /locus_tag="OQQ26_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HCS1856393.1"
                     /translation="MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHV
                     GDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTL
                     GQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRHDGLMLTL
                     QNNPPQ"
     gene            10612..10773
                     /locus_tag="OQQ26_000837"
     CDS             10612..10773
                     /locus_tag="OQQ26_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000395868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856394.1"
                     /translation="MEFSFSPKLLVVAVAAALPLMASAADTPSTATARKGFAGYDHPN
                     QYPQNAAIY"
     gene            complement(10857..12092)
                     /locus_tag="OQQ26_000838"
     CDS             complement(10857..12092)
                     /locus_tag="OQQ26_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709601.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HCS1856395.1"
                     /translation="MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTH
                     MDDDTLEAYIRHYIAASELQNEVAFTWQGGEPTLLGLEFYRRAVALQAKYGAGRKISN
                     SFQTNGVLLDDEWCAFLAENNFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL
                     QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAVRDGLKLH
                     APGDIQGELTEWSVRPDEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVC
                     HHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQ
                     LPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLL
                     AHGRPASDIMQAHLMVVNK"
     gene            complement(12239..12315)
                     /locus_tag="OQQ26_000839"
     tRNA            complement(12239..12315)
                     /locus_tag="OQQ26_000839"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12279..12281),aa:Pro,seq:tgg)
     gene            complement(12358..12444)
                     /locus_tag="OQQ26_000840"
     tRNA            complement(12358..12444)
                     /locus_tag="OQQ26_000840"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12408..12410),aa:Leu,seq:cag)
     gene            complement(12465..12540)
                     /locus_tag="OQQ26_000841"
     tRNA            complement(12465..12540)
                     /locus_tag="OQQ26_000841"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12505..12507),aa:His,seq:gtg)
     gene            complement(12599..12675)
                     /locus_tag="OQQ26_000842"
     tRNA            complement(12599..12675)
                     /locus_tag="OQQ26_000842"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12639..12641),aa:Arg,seq:ccg)
     gene            complement(12778..14163)
                     /locus_tag="OQQ26_000843"
     CDS             complement(12778..14163)
                     /locus_tag="OQQ26_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1856396.1"
                     /translation="MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVA
                     GVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA
                     IASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGL
                     NRHGKAHKLEE"
     gene            complement(14354..15094)
                     /gene="rffM"
                     /locus_tag="OQQ26_000844"
     CDS             complement(14354..15094)
                     /gene="rffM"
                     /locus_tag="OQQ26_000844"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HCS1856397.1"
                     /translation="MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAI
                     NAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMA
                     RAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASG
                     AQIVTVAMGSPKQEIFMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWL
                     YRLLSQPSRIKRQLRLLRYLRWHYTGNL"
     gene            complement(15097..16449)
                     /gene="wzyE"
                     /locus_tag="OQQ26_000845"
     CDS             complement(15097..16449)
                     /gene="wzyE"
                     /locus_tag="OQQ26_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA oligosaccharide polymerase"
                     /protein_id="HCS1856398.1"
                     /translation="MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKPRLRKRVADVPR
                     RPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTWEVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNRETNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLWTQVEG
                     "
     gene            complement(16446..17525)
                     /gene="rffT"
                     /locus_tag="OQQ26_000846"
                     /gene_synonym="wecF"
     CDS             complement(16446..17525)
                     /gene="rffT"
                     /locus_tag="OQQ26_000846"
                     /gene_synonym="wecF"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HCS1856399.1"
                     /translation="MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDD
                     GLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPS
                     QFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL
                     LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVP
                     MGYPPNNEAYIEEVRQAGLELFSEENLQVLSEKLEFDAYLTLLRQCDLGYFIFARQQG
                     IGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKN
                     TIAFFSPNYLQGWQRALAIAVGEVA"
     gene            complement(17522..18772)
                     /gene="wzxE"
                     /locus_tag="OQQ26_000847"
     CDS             complement(17522..18772)
                     /gene="wzxE"
                     /locus_tag="OQQ26_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HCS1856400.1"
                     /translation="MSLAKASLWTTASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFR
                     QLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAA
                     APISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGV
                     LAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLS
                     KFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKRDITREVVKSLKFVLPAVAAVSFTVWLLRDFAIWLLLSNKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEISQFTLLMVFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(18774..19904)
                     /gene="rffA"
                     /locus_tag="OQQ26_000848"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(18774..19904)
                     /gene="rffA"
                     /locus_tag="OQQ26_000848"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HCS1856401.1"
                     /translation="MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRP
                     DTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGR
                     IELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAVERFG
                     EFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS"
     gene            complement(19909..20583)
                     /gene="rffC"
                     /locus_tag="OQQ26_000849"
                     /gene_synonym="wecD"
     CDS             complement(19909..20583)
                     /gene="rffC"
                     /locus_tag="OQQ26_000849"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HCS1856402.1"
                     /translation="MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTSDALAPWSRV
                     QAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASA
                     AFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNA
                     TDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVEST
                     AYWLYR"
     gene            complement(20561..21442)
                     /gene="rfbA"
                     /locus_tag="OQQ26_000850"
     CDS             complement(20561..21442)
                     /gene="rfbA"
                     /locus_tag="OQQ26_000850"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HCS1856403.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKT
                     GYGQYLLELLRARPRQY"
     gene            complement(21461..22528)
                     /gene="rffG"
                     /locus_tag="OQQ26_000851"
     CDS             complement(21461..22528)
                     /gene="rffG"
                     /locus_tag="OQQ26_000851"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HCS1856404.1"
                     /translation="MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL
                     APVAQSERFAFEKVDICDRAELARVFTAHQPDCVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYG
                     NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN
                     KPHGVVHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN
                     ESWWKQVQDGSYQGERLGLKG"
     gene            complement(22528..23790)
                     /gene="wecC"
                     /locus_tag="OQQ26_000852"
     CDS             complement(22528..23790)
                     /gene="wecC"
                     /locus_tag="OQQ26_000852"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HCS1856405.1"
                     /translation="MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
                     GEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAA
                     RSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSARASELYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNI
                     DDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVM
                     LVDHSQFKVINGDNVHQQYVVDAKGVWR"
     gene            complement(23787..24917)
                     /gene="wecB"
                     /locus_tag="OQQ26_000853"
     CDS             complement(23787..24917)
                     /gene="wecB"
                     /locus_tag="OQQ26_000853"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312746.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HCS1856406.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALAKAPFFEAKVCVTAQHREMLD
                     QVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN
                     VADSRIFITGNTVIDALLWVRDQVMSSDTLRSELAANYPFIDPDKKMILVTGHRRESF
                     GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVE
                     EVTRLLKDENEYQTMSRAHNPYGDGQACSRILEALKNNRISL"
     gene            complement(24973..26019)
                     /gene="wzzE"
                     /locus_tag="OQQ26_000854"
     CDS             complement(24973..26019)
                     /gene="wzzE"
                     /locus_tag="OQQ26_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HCS1856407.1"
                     /translation="MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA
                     LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK
                     EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS
                     VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA
                     IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP
                     AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG
                     LIGAGVALTRRCSK"
     gene            complement(26031..27134)
                     /gene="wecA"
                     /locus_tag="OQQ26_000855"
     CDS             complement(26031..27134)
                     /gene="wecA"
                     /locus_tag="OQQ26_000855"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HCS1856408.1"
                     /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQ
                     GLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRAT
                     IQAAVGIVMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK"
     gene            complement(27374..28633)
                     /gene="rho"
                     /locus_tag="OQQ26_000856"
     CDS             complement(27374..28633)
                     /gene="rho"
                     /locus_tag="OQQ26_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HCS1856409.1"
                     /translation="MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(28718..28819)
                     /gene="rhoL"
                     /locus_tag="OQQ26_000857"
     CDS             complement(28718..28819)
                     /gene="rhoL"
                     /locus_tag="OQQ26_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide RhoL"
                     /protein_id="HCS1856410.1"
                     /translation="MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR"
     gene            complement(28960..29289)
                     /gene="trxA"
                     /locus_tag="OQQ26_000858"
     CDS             complement(28960..29289)
                     /gene="trxA"
                     /locus_tag="OQQ26_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HCS1856411.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            29420..30685
                     /gene="rhlB"
                     /locus_tag="OQQ26_000859"
     CDS             29420..30685
                     /gene="rhlB"
                     /locus_tag="OQQ26_000859"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HCS1856412.1"
                     /translation="MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTHELAVQIHA
                     DAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
                     IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD
                     LPKPLRLTRPRTGNGPRRTGAPRNRRRSG"
     gene            30819..32303
                     /gene="gppA"
                     /locus_tag="OQQ26_000860"
     CDS             30819..32303
                     /gene="gppA"
                     /locus_tag="OQQ26_000860"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HCS1856413.1"
                     /translation="MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAA
                     GLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFITKAQE
                     ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSL
                     SMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQAL
                     QEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIF
                     TELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVA
                     ANFFDQVENEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPA
                     QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMT
                     LKANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH"
     gene            complement(32350..34371)
                     /gene="rep"
                     /locus_tag="OQQ26_000861"
     CDS             complement(32350..34371)
                     /gene="rep"
                     /locus_tag="OQQ26_000861"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HCS1856414.1"
                     /translation="MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     ANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGER
                     DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGTELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISSGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY
                     EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
                     YVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK"
     gene            34588..35037
                     /locus_tag="OQQ26_000862"
     CDS             34588..35037
                     /locus_tag="OQQ26_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HCS1856415.1"
                     /translation="MAINFSPMVGEILECNFGNYPVSQNGQFSTTYYDGRIPPEMIKN
                     RLVVVLNGKINGNACIVVPLSTTRDHDKLNRGMHVEIASNVINDLQFFDQQIRWAKAD
                     LVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAISLIN"
     gene            35236..35517
                     /gene="ppiC"
                     /locus_tag="OQQ26_000863"
     CDS             35236..35517
                     /gene="ppiC"
                     /locus_tag="OQQ26_000863"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004097481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HCS1856416.1"
                     /translation="MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSG
                     KRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
     gene            complement(35563..37038)
                     /gene="ilvC"
                     /locus_tag="OQQ26_000864"
     CDS             complement(35563..37038)
                     /gene="ilvC"
                     /locus_tag="OQQ26_000864"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HCS1856417.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRYEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETALQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPE
                     GAVDNAQLRDVNEAIRSHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            37188..38081
                     /gene="ilvY"
                     /locus_tag="OQQ26_000865"
     CDS             37188..38081
                     /gene="ilvY"
                     /locus_tag="OQQ26_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HCS1856418.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
                     QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPM
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILDRSDEKTPFELGVCA
                     QKKRLHEPLIEAFWRILPNHK"
     gene            complement(38133..39677)
                     /gene="ilvA"
                     /locus_tag="OQQ26_000866"
     CDS             complement(38133..39677)
                     /gene="ilvA"
                     /locus_tag="OQQ26_000866"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HCS1856419.1"
                     /translation="MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIDLSQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIALHNIRGERLAHILSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEER
                     KEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRF
                     LNTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAF
                     RFFLAG"
     gene            complement(39680..41530)
                     /gene="ilvD"
                     /locus_tag="OQQ26_000867"
     CDS             complement(39680..41530)
                     /gene="ilvD"
                     /locus_tag="OQQ26_000867"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HCS1856420.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIG
                     ILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDSVKNMFRAGPAGIRTTQAFS
                     QDCRWDSLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELA
                     ARREAQEARGDKAWMPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(41595..42524)
                     /gene="ilvE"
                     /locus_tag="OQQ26_000868"
     CDS             complement(41595..42524)
                     /gene="ilvE"
                     /locus_tag="OQQ26_000868"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HCS1856421.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIF
                     VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ"
     gene            complement(42544..42807)
                     /gene="ilvM"
                     /locus_tag="OQQ26_000869"
     CDS             complement(42544..42807)
                     /gene="ilvM"
                     /locus_tag="OQQ26_000869"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HCS1856422.1"
                     /translation="MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQN
                     INIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA"
     gene            complement(42804..44450)
                     /locus_tag="OQQ26_000870"
     CDS             complement(42804..44450)
                     /locus_tag="OQQ26_000870"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HCS1856423.1"
                     /translation="MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKD
                     IQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE
                     FLAATKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQVCDLLIAVGARFDDR
                     VTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPALQQPLNINDWQQHC
                     AQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(44453..44503)
                     /locus_tag="OQQ26_000871"
     CDS             complement(44453..44503)
                     /locus_tag="OQQ26_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856424.1"
                     /translation="MNNSTKFCFSRFRTGN"
     gene            complement(44590..44688)
                     /gene="ilvL"
                     /locus_tag="OQQ26_000872"
     CDS             complement(44590..44688)
                     /gene="ilvL"
                     /locus_tag="OQQ26_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HCS1856425.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
     gene            45041..46561
                     /locus_tag="OQQ26_000873"
     CDS             45041..46561
                     /locus_tag="OQQ26_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418214.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HCS1856426.1"
                     /translation="MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKE
                     ARDRVRSAIINSRYEYPAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLD
                     EYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHL
                     QAVCAFLEGKNTLERPKPTDAVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGP
                     PGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFRSPHHSASLT
                     AMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITY
                     PARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGI
                     LSKTVVPGESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEET
                     LIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVSYRAIDRLLIHLQKLLT"
     gene            complement(46586..46924)
                     /gene="maoP"
                     /locus_tag="OQQ26_000874"
     CDS             complement(46586..46924)
                     /gene="maoP"
                     /locus_tag="OQQ26_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HCS1856427.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNE
                     LDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTDSDD"
     gene            47043..47882
                     /gene="hdfR"
                     /locus_tag="OQQ26_000875"
     CDS             47043..47882
                     /gene="hdfR"
                     /locus_tag="OQQ26_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HCS1856428.1"
                     /translation="MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLG
                     VNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWEC
                     MLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQL
                     LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQ
                     IAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLD
                     EVY"
     gene            complement(47978..48053)
                     /locus_tag="OQQ26_000876"
     tRNA            complement(47978..48053)
                     /locus_tag="OQQ26_000876"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(48018..48020),aa:Trp,seq:cca)
BASE COUNT        11914 a        12898 c        12147 g        11101 t
ORIGIN      
        1 ctcattattc ttggcatagt gatggtcgca atatcctcta cgcgggtgaa gttgtgcaaa
       61 accctcccgg cacacctccc gtcgatgtcg cctcgttcaa ggcatggggt gattttgccg
      121 cagataaaca cagtctctat tttgaaggca agcgcaccga tgacaatggt ggtggaaata
      181 gcttggatat caaaacgctg catcaggtgg aattccggcc tccctgggat cctgacttac
      241 tggggctgat attacgtgac gctaatttct tgtatatcaa tgggcatcgc ctcgctgacc
      301 ccgagagttt ccgtgtgctg gcgcagaagt cctgggatca gcgaggaaag ttttccacca
      361 cgtttaaccc ctgcattgcc gtaccatttg gcccctggga taccctggct cgtacacgga
      421 ccaaaatcct gatcaacggc gaacagcttg atgccgaccc ggacaccttt tccgtcgtgc
      481 gctggatgcc cggctcactc ttgacctgac gtgataaaaa cgggctgcag cgtaaagtcc
      541 tcgacaagga aaatctggag tgggatgaag atttaacaaa gcactgtctg gatttttctc
      601 tgctggaaaa gaaagtgttc tggcgtaaag gacctgcttg taaacaggaa gaattacccg
      661 gactcgatcc ggagcagttt caacccatca gtgatgctgt cgcccagtat caggactcgc
      721 tttataccat catcgaaaca gagtctggtg accgcaagct ggaaatcgtg aaacttgatg
      781 atcccaatct tattatcaac aaacgtttca acgccgggaa acgccacggc tatttactta
      841 cgcgtgccga agggtggcca taccattccg gtttacatgt gtttgaatct gacggaccgc
      901 tgatcttact ggataaccgt tctccggatg aacgcgaagc ccatcttaat gaccatccct
      961 ttttgcgcag atggtatgcc cgcgataacc gctacgttta cagctttgat ggcgcgcagc
     1021 tctggcgata ccgcaccgct gatccgaaac aagttcgctt aatctggaag gaacaacatt
     1081 cgggatatgg ctatggcgta aattacaaaa cgggatatct ggacggaaaa attaccgatg
     1141 acggcgaatt tattcctgcc ccgcgcaatg aggcgacaaa atgaatggtc aaataatcac
     1201 tgttgcactc atcctgttgg ggcacatatt tcttacacct gctgtacagg ccatagggtt
     1261 cgactattac aatgatcacg gtgtcatgtc ttacggtaaa ggttatgggg aggatgagaa
     1321 aatcattgcc caatttccga agatgaacag ggccgatttg cgccttgtga caaatatatc
     1381 cggggagcgg gagttggtgg aaggctatat acccaccgat gaaataagca taaaaaatga
     1441 ggaataccac tgggtgacag acggtcgcgt tattctctgg cgtggcaaaa tcgttagcaa
     1501 tccaccagga acacccactg tcgatattgc cagctttcag tctataggcc gcttcgcggt
     1561 cgataaatat agcctctatt ttgacggaca gcgcaccgaa agtaatagcg gcgcgtcacg
     1621 tgttgatctg gcgacactaa aagctatcga aggtaactct accacgctgg tggatagtaa
     1681 aaatctctat ttgtccggtc gacgtcaggg gagcagcagt aatgttactg tattagaaaa
     1741 aagatggtgg ggtattaatc cacgtcttat gagtgtaaac agaaatttgt attccaatga
     1801 tctgcttatt cgcagtgggc agaatattta tttaaatggc gttcacctta cggcgaatgc
     1861 agactcattt gagataattc gctggatacc tcattcactg ctggtttttc gcgacaataa
     1921 gggtatgcat cgttatccct ttgggcaatt gcctggcaaa gcgatacccg tagatgatga
     1981 cgtctctttt gaagtagggg aaagtcgcgt tcgctggcgt aaacagctca cgcccgaccg
     2041 tcagtggagc aagtggatag acctaccggg tattgaacct gaacaatttc atctgattac
     2101 tggcaatatt gcgcagtata aagatcggct gtatgtaaca aaattatcga catttggtga
     2161 agaccagctt gaaataatcc agctggatac gccagacctg gtcattgatc actcatttaa
     2221 tagcggcaaa cagcatgctt attttatccg ccaattacgg tcaaagagcg tgcaaattat
     2281 tccagttaac ggcctgctaa ctaaaaacga tcgcttcgct tatgacgaac gcaatgttta
     2341 tacatggacc aatacagagg taaggattac gccctccccc tgcccggcga aaactcgtgt
     2401 cagagaggag aacgtacgtg aagttcaaaa cagagacatc attattccgg tgacggatga
     2461 atcatgccgg aacgcagccg cagaggtgca aactttgaag ccctgacccc atgccgctat
     2521 actgccgcca tcacttaaaa acaggataca acaatgaacg acagtgaatt tcatcgcctg
     2581 gctgatcaac tctggctgac cattgaagaa cgcctggacg actgggatgg cgacagcgat
     2641 atcgactgcg aaatcaacgg cggcgtactg accattacct ttgaaaacgg cagcaaaatc
     2701 attatcaacc gccaggaacc gctgcaccag gtatggctgg caaccaaaca gggcggctac
     2761 cattttgacc tgaaaggcga cgaatggatt tgcgatcgca gcggtgaaac cttctgggat
     2821 ttgctggaac aggcggcaac gcagcaagcg ggtgaaacag tcagtttccg ctaagattgc
     2881 atgccggata agcctcgctt tccggcacgc tcatcacgaa aaatactgct gtaatagcgg
     2941 cgtatcgtga tcctgattgg caggcggcat gttatcgata gatttggtgc ggaacggaat
     3001 cacctgttcg cgaccatcaa ccttcacaat ctgatagaac tgcggcaggt tgaagttgat
     3061 gaagcttgag ccgtaggtga agcggtcgtg cgatgacgag tagaagcgac tgacgtcacg
     3121 caccagttcc tctttgctgc cttcgcagtg gtgatacacc tcaacccggt tgctttcgtc
     3181 aagaatgtag atattaaagc cattctcgtc ttgcgtttct tcgaagaaga actggatgat
     3241 cccttcacta gcaaagccgt ccaccaccgc cggtaatttg acgtgattgg tttcaacctg
     3301 cactgacagg ccgtgcagtt tgttatgcga aatagcgcca taaaactcga tggcgttctc
     3361 cagcttctgt accgatacat tcaggcgttc gaagaacaag ccccaggttt gaccagaaac
     3421 gcgcagcgcc ttgaaacgcc cggtttcttg gcgggtgctg gaaaggcgca gttcaataca
     3481 ctcagaaacc agttgctgca cgcgagtacg gattaagccg cgcagatgct ggctataaca
     3541 gaagacttcc acgctatctg gcggtgcggc gtcctgatgc attttgccga gaatagtttt
     3601 cagggcttcg atcatcgatt gctcgccgtt gaagtgcagc gtacgcactt cgttccacga
     3661 gttgcggtac agcaggtcaa cgctacctac caggcaattt tgattctcgc caaagctgaa
     3721 gacatccagc ttacggaaat caaaatgcac cacctgattg cggaacgcag ctgtcgggtc
     3781 atattccagg ttaacgataa tcgccagatg gcgaatctca cacgggctgt agagcgcctt
     3841 cggtgtcggt gcaggtaagc gcagcgggaa atggtgcgac acgtcggcga ccatctcctg
     3901 caacttaggc aaatcgacaa tgccgttacc tttaatatac aaacgggtgc gcgaggtcag
     3961 caggccgtta aaccatgccc acgccaccag tttattcagg taacggttat attccagcgg
     4021 ctgatggctg atgatcgact caatatttgg cgcgcggtta tacagatacc aacctgaacg
     4081 gttagcccgg cccggcggca cataaataaa ggtcagattc ggttccgaga gatcgggtga
     4141 aatctgcggg tttaccagcg tcactttacc tggcaatgct tcaaacgcgg catacagttt
     4201 acgcgtcagt acgccgatat cctgcggact ggcggagacg ctaaggttat tgcgacgcgc
     4261 aaagcggatc agattacggt agctctgcat catcgcgtcg agcagctcgt tgtgcgcctc
     4321 acgcacctga tcaatcttcc agttagcacg gttatcgagc attgccagac gagcttcgtc
     4381 ccaaccccac tcgctcacta actggctcaa cactgcgcga cgccagccta cgcaggcgcg
     4441 ttcacggctg agtttttcgc acacttttaa atagaagcag cgacgtacta aatccagacg
     4501 ggtgaaatct tcaatcgccg tcaggtattc agtaacacgc tccagcatca tgcagtatgg
     4561 atcgaggcca aacgatacaa tctcgccgtc gtgcaaacgc tgtttgatat ctttcgccag
     4621 cagacgtggg ttcgggtatt cccaggaata ggcttccagc agcagtgttt tcagcaccgc
     4681 tttgtatggg gaatcgatac tcttgtagag ctgccaaagg ctggcaccaa agtactcttc
     4741 agcagaaagc gagcttaagc caccgagatc cagccattca tttggcgtca gcacgccctg
     4801 cgcgtaaagc gtcatcacat agtcgtcata atgctcttct tcgtcgcacg gcaccatatt
     4861 ccacagaata cgcttaccgg cgagacgcac ggcggtacga taaaattcgt caagcagcag
     4921 tatatgctgg gtggagccac aatcttcgcc ccccaggctg ccgctttcat tatgacggaa
     4981 gcggttttca tcaatcagga agaagctgac ttccacaccc agcgatgcgg cccagctttc
     5041 cagcaggctg catttacgtt gtagtaactg gcgctcttcg ctatcgagcc aggattgatg
     5101 acagacccag atatctaggt cagaggaaca actttgccct acggacgagg tgctgcccat
     5161 ggtgtataca ccagtaattg gaagctcacc tttcggtggg tcctgtactg acattccacg
     5221 atacagttca agctcgttca ggtagtggcg ttgagtttca tcaggcgtgt aaaggcaaat
     5281 gcctttggga acgttaccat caaggtaacc cggcattagc ggatggtgat agtgcaacaa
     5341 tgtcggcagt agactgtaga cctgttgaaa tgcaggcccc atagcagcaa gcgcgcgatc
     5401 cacacgcaat tgatttatgg catccagtct ctgtttcaga gtctcaatat agaggtacaa
     5461 gacgtatcgc ctgatttgct acccgtcatg actgtgattc cgccaacatc aacggtaaca
     5521 cgcggcattc gggatatttc gtatgtcaaa ggtaaccgtt accacttttc gcgcctggtt
     5581 tttttagttt cacgacgaaa aaatggtcta aaacgtgatc aatttaacac cttgctgatt
     5641 gaccgtaaag aaagatgcgc tacatacaag tgtagcaccg tttattctct gtaaattcct
     5701 tattacgacg gcgtgaaacg cctgtcagga tccactgcca gacctcattt tactatttgc
     5761 gcaggcgtct acgtttcacc acaacactga catcactctg gcaaggatgt taggatggac
     5821 cacggatgat aatgacggta acaagcatgt tagacaatgt tttaagaatt gccacacgcc
     5881 aaagcccact tgcactctgg caggcacact atgtcaaaga caagttgatg gcgagccatc
     5941 cgggcctggt cgttgaactg gtaccgatgg tgacgcgcgg cgatgtgatt cttgatacgc
     6001 cgctggcgaa agtaggcgga aaaggcttat ttgtaaaaga gctggaagtc gcgctcctgg
     6061 aaaaccgcgc cgatatcgcc gtacactcaa tgaaagatgt gccggttgaa ttcccgcaag
     6121 gtctgggact ggtcactatt tgtgagcgtg aagatcctcg cgatgccttt gtgtccaata
     6181 actatgacag tctggatgcg ttaccggcag gcagtatcgt cgggacgtcc agtttacgtc
     6241 gccagtgcca actggctgaa cgccgcccgg atctgattat ccgctccctg cgcggcaacg
     6301 tcggcactcg cctgagcaaa ctagataacg gcgaatacga tgccatcatt cttgccgtag
     6361 ccggactaaa acgtttaggt ctggagtccc gcattcgcgc cgcgttacca cccgagattt
     6421 ctcttccggc ggtaggacaa ggtgcggtcg gtattgaatg ccgccttgat gatgcacgca
     6481 ctcgcgagct gcttgccgcg ctgaatcacc acgaaactgc actgcgcgtt accgcagaac
     6541 gcgccatgaa tacccgtctc gaaggcggat gtcaggtgcc aattggtagc tacgccgagc
     6601 ttattgatgg cgaaatctgg ctacgtgcgc tggtcggcgc gccggacggt tcgcagatta
     6661 ttcgcggtga acgccgcggt gcgccgcaag atgccgaaca aatggggatt tcgctggcag
     6721 aagagctact gaataacggc gcgcgcgaga tcctcgctga agtctataac ggagacgccc
     6781 cggcatgagt atcctggtca cccgcccgtc tcccgctgga gaagagttag tgagccgtct
     6841 gcgcacactg gggcaggtgg cctggcattt tccgctgatt gagttttctc cgggtcgaca
     6901 attaccgcaa cttgctgatc aactggcagc gctgggggag agcgatctgt tgtttgccct
     6961 ctcgcaacac gcggttgctt ttgcccaatc acagctgcat cagcaagatc gtaaatggcc
     7021 ccaactacct acttatttcg ccattggacg caccaccgca ctggcgctac ataccgtaag
     7081 cggacagaag attctctacc cacaggatcg ggaaatcagc gaagtcttgc tacaattacc
     7141 tgaattacaa aatattgcgg gcaaacgtgc gctgatatta cgtggcaatg gcggtcgtga
     7201 gctaattggg gataccctga cggtgcgcgg tgctgaggtc actttttgtg aatgttatca
     7261 acgatgcgca atccattacg atggtgcaga agaagcgatg cgctggcaat cccgcgaggt
     7321 gacgatggtc gttgttacca gcggtgaaat gttgcagcaa ctctggtcgc tgatcccaca
     7381 atggtatcgt gagcactggt tactacactg tcgactattg gtcgtcagtg agcgtttggc
     7441 gaaactcgcc cgggaactgg gctggcaaga cattaaggtc gccgataacg ctgacaacga
     7501 tgcgctttta cgggcattac aataactctc ataacaggaa gccataatga cggaacaaga
     7561 aaaaacctcc gccgtggttg aagagaccag ggaggccgtg gacaccacgt cacaacctgt
     7621 cgcaacagaa aaaaagagta agaacaatac tgcattgatt ctcagcgcgg tggctatcgc
     7681 tattgctctg gcggcgggtg tcggtttgta tggctggggt aaacaacagg ccgtcaatca
     7741 aaccgccacc agcgatgccc tggctaacca actgacggca ttgcaaaaag cccaggagag
     7801 ccaaaaagcc gagctggaag gcattattaa gcaacaagct gcgcagctta agcaggcgaa
     7861 tcgtcagcaa gaaacgctgg caaaacagtt ggatgaagtc caacaaaaga tcgccaccat
     7921 ttccagcagc gatgctaaaa cctggctgct ggctcaggcc gattttctgg tgaaactcgc
     7981 cggacggaag ctgtggagcg atcaggacgt cacgaccgct gcagcgttgc tgaaaagtgc
     8041 agacgccagc ctggcggata tgaatgaccc gagtctgatt accgttcgtc gggcaattac
     8101 cgatgatatc gccagccttt ctgcagtatc gcaggtggat tatgacggca tcatccttaa
     8161 gcttaatcag ctttcaaatc aggtagataa cctgcgtctg gccgataatg acagcgatgg
     8221 ttcgccgatg gattcagacg gtgaagagct ttccagttcc atcagcgaat ggcgtatcaa
     8281 tctgcaaaaa agctggcaga actttatgga caacttcatt acgattcgcc gtcgtgatga
     8341 caccgccgta ccgctgttag cgccaaatca ggatatctat ctgcgcgaaa atattcgctc
     8401 tcgcctgctg gtcgcagcac aagctgtacc gcgtcatcag caagagactt atcgccaggc
     8461 gctggagaat gtctccacct gggtacgtgc ttactacgat actgatgatg ccaccaccaa
     8521 agcgttcctc gacgaggtgg accagttaag ccagcaaaat atctcgatgg atcttccgga
     8581 aaccctgcaa agccaggcga tgctggaaaa actgatgcag actcgcgtgc gtaacctgtt
     8641 ggcacaaccg gcagcggggg caacggaagc taaacctgca cctgcacctg caccgcaagc
     8701 tgatactccg gcagccgcgc cgcaaggaga ataaccatgc taaaagtgtt attgctcttt
     8761 gtgttgctga ttgcggggat cgtggttggc ccgatgattg ccggtcatca gggttatgtg
     8821 ctgatccaga ccgacaacta caatatcgaa accagcgtca cgggcttggc gatcatattg
     8881 attctggcga tggtagtgct gtttgccatt gagtggctac tgcggcggat cttccgcact
     8941 ggcgcgcaca cccgtgggtg gtttgtcggg cgtaagcgtc gccgtgcacg taagcagacc
     9001 gaacaggcgc tgctgaaact ggcggaaggc gattatcagc aagttgaaaa gctgatggcg
     9061 aaaaatgccg atcacgctga acaaccggtg gtgaactatc tactggctgc cgaagccgcg
     9121 caacaacgtg gtgatgaagc gcgcgccaac caacatctgg aacgcgcagc ggagctggcc
     9181 ggcaatgaca ccattccggt agaaatcacc cgtgtacgtc tgcaactggc ccgtaatgaa
     9241 aaccatgctg cacgccacgg cgtggataag ctgctggaag ttacgccacg ccatcctgaa
     9301 gtattacgtc tggcggaaca ggcgtatatc cgcacagggg catggagttc tctgctggat
     9361 atcatcccat caatggcgaa agcccatgtt ggtgatgaag aacatcgtgc aatgctggaa
     9421 caacaggcat ggattggcct gatggatcag gcgcgtgccg ataacggtag cgaaggtttg
     9481 cgtaactggt ggaaaaacca aagccggaaa acgcgtcatc aggtagcgtt gcaggtggca
     9541 atggcggaac atcttattga atgtgacgat catgatactg cccagcaaat tatcatcgat
     9601 ggcctgaaac gccagtacga cgatcgccta ctgctgccga ttcctcgact gaaaaccaac
     9661 aatccggaac agttggaaaa agtgctgcgc cagcagatca aaaacgtcgg cgatcgcccg
     9721 ctgttgtgga gcacactggg ccagtcactg atgaagcacg gagaatggca ggaagcatcg
     9781 ctcgccttcc gcgcagcgct gaaacaacgt ccggacgcct acgattacgc atggcttgcc
     9841 gacgcgctgg acagactgca caagccggaa gaagctgcag cgatgcgtca cgacggtttg
     9901 atgttaacgt tgcagaacaa cccaccacag tagttccttc tcacccggag gcaagcacct
     9961 ccggggcctt cctgacacat aaaaaaacgc ctgctcttat tacggagcag gcgttaaaac
    10021 aggtctgtat gacaacaagt gggtgcttca ctcaacgttg tgtccatggt gtctgatgag
    10081 gcataagcga catctgtcag tggacgataa gcaccgtaaa ctgctctgcg tcattccgga
    10141 gtttatgagg cactaaggcg aacataagag atggaatgag catctacccg tttattatgc
    10201 cacagagaat cgggaaataa catcccttaa cacttgttat gagataattc tgtaatcctc
    10261 tttgcttcct gagtaataac ttcctgagtg aatatttaac ctgagcttga tcctacacat
    10321 acttattatg aatgataaaa ttcattcaat taataacaca tatattaatt gctgttaaaa
    10381 ctaaaaacag catcaataat caacgcgata taataaacct gccttacata tcaactgcgc
    10441 cagaggtagg attgaaaacg ctctcctgat tttccaattc attttctgga taaataaata
    10501 atttattttt gtcactatta tttatgtaat catcctgtca gggagaggga tctcaattat
    10561 caatgcttaa ttacgtcatc attttgatga catgaaaccg gagcattttg catggaattt
    10621 tcgttttcac ccaaacttct tgttgttgct gtcgccgccg ctcttcctct catggccagc
    10681 gcagcagata ccccgtcaac tgccaccgca cgcaaaggct ttgccggata cgatcaccca
    10741 aaccagtatc cacagaacgc tgcaatttat tgaatttgca cgatcatgta ggccggataa
    10801 ggcgtttacg ccgcatccgg caatcaaccg caggcggctt ccaaatggcc gcttttttac
    10861 ttattcacca ccatcaaatg tgcctgcata atgtcactgg ccgggcgacc gtgcgccagc
    10921 aaatcagcca ttgctttaag atatggcggt agatggcgga aataacgctg atacccggca
    10981 cacaaataat tcagccccgg tttgccgctg gcatcgagca tgaagcggtg tttcgggcag
    11041 cctccccaac atgcttttaa cacgttacaa ctgcgacact gcgccggtaa ttgcttaaat
    11101 ttatcttcac caaacacctg ctgttgcggg gaatcgatca tttctgcaat tgtttgctga
    11161 tgcatattcc ccagccgata ttgcggataa acatagtgat cgcaggcgta aacgtcgccg
    11221 ttgtgctcaa caatcaccga gcgcccacag gttggctgat gatggcaaac cgcacccggc
    11281 gcaccgacaa aattggcaaa cgcccattcg atattcatca cgaaaatctt gccgacgtcg
    11341 cgtttgatcc agtggtcaaa aatcgccacc agaaattcac caaattcatc ggggcgcaca
    11401 gaccattccg tcagttcccc ctgaatatca ccaggcgcat gtagtttcag tccatcgcgg
    11461 acagctgttt catcagccag gcgctcgacc accggaataa actggatgaa ttcgactccc
    11521 gcatcgcaca aaaaatcata aacctgtaac ggttgctgcg cgctggtgcg gttgacgcag
    11581 accagcacgt tatagtcgac atgatgtttt tgcaggagcg tcagggcacg catcaccagt
    11641 ttatgcgtgg gtctgccgcc tttggtcacg cgatattgat tgtggatctc agccggacca
    11701 tccagcgata acccaacaag aaaattattt tctgccagaa atgcacacca ttcgtcatcg
    11761 agcagcacgc cgttagtctg gaagctgtta cttatcttcc tgccagcacc atatttcgcc
    11821 tgtagcgcca cggcacggcg gtaaaactcc agcccgagta gcgttggttc gccgccctgc
    11881 caggtaaaag ccacttcgtt ttgcagttcg ctggcggcga tatagtgacg gatatacgct
    11941 tccagcgtgt catcgtccat atgcgtgact ggcttttcgc ggtaaaggga ttgtttttcg
    12001 agataaaaac agtagtcaca gttcagatta caatcggaac cgctcggttt cgccatcaca
    12061 tgaaaagcac gcgttggaac ctgttgcagc atggtcgctc cttgcctgaa gtcatccttc
    12121 aatacgttaa gggcgaaatc ataccgtggg gcaatgagtt attacgggcg tttattgcga
    12181 agggagggtg acgaaatgca cagaaaacaa aaaaccccgc cgaagcgggg ttcaaaattg
    12241 gtcggcgaga gaggattcga acctccgacc cactggtccc aaaccagttg cgctaccaag
    12301 ctgcgctact cgccgaaata ctgctttttg aatttttagt tcaattcttt aaagtcgtgg
    12361 tgcgaggggg gggacttgaa cccccacgtc cgtaaggaca ctaacacctg aagctagcgc
    12421 gtctaccaat tccgccacct tcgcattgtc acaacttcta ataatggggt ggctaatggg
    12481 attcgaaccc acgacaactg gaatcacaat ccagggctct accaactgag ctatagccac
    12541 cactacaaat cttgttacgc ggtattacta ccaccgcagc tcaagcgccg ggactaaatg
    12601 gcgcgcccga caggattcga acctgagacc tctgcctccg gagggcagcg ctctatccag
    12661 ctgagctacg ggcgcttagc gccgttgcgg gggtggataa tacggacttc ccacccctct
    12721 gtctagtccc tttttaaata aattgcgcgt ttggttacgg tttgtgcgtt ttgctgctta
    12781 ttcctccagt ttatgcgctt taccgtggcg attaagccca aaaactttat aaatcgccgt
    12841 caccgccagc ataaagatga tgccgacaaa cagcgacata cgcgtatctt cattaaagta
    12901 catgccgatc aaaacgcaaa tcaggaatgc cattgttacg tagttggccc acgggaacag
    12961 gattgagcgg aacggatggc tggcaatcgc cgctttatgt gcacgccgaa aacgcagctg
    13021 gcttatcaat atcacaaacc atggcaccat ccccggaagc acgctggcac tgtagacgta
    13081 gacaaacaca cgctgcggat tgggaatgat gtagttcagg catgagccaa ttagcagaat
    13141 agcaatagat actgccacac ccgcaactgg tacgccgtga cgggaaactt tcgccatcgc
    13201 cgctggtaac tgacggtttt tcgccagtgc gtagagcata cgtccgcaac tgtacatgcc
    13261 gctgttacag ccagagagcg cagccgtcag caccacaaag ttgataatgc ccgccgctgc
    13321 ggtaataccg attttggcaa aagtcagtac gaacgggctg ccgttgctgc caatttcatt
    13381 ccacgggaag atggtgacga taacgaaaat cgcgcctacg tagaaaatca ggatccgcca
    13441 cagcaccttg cctacggcac tgcgcagcgt cacctgcgga ttcttcgctt caccggcagt
    13501 aatgccaatc agctccacgc cctggtagga cgccaccaca atacacagcg cggtcaggaa
    13561 ccctttccag ccacccgcaa agaaaccgcc atgctctgtg agattgctaa aaccaatcga
    13621 ctgcccgcca ttgccaaagc caaagaaaat cacgcccagg ccaatgacaa tcatcacgat
    13681 aatcgtggtg actttgatca tcgcgaacca gaactcgatt tcgccgtaca accgcaccgc
    13741 cgccagattc gccaacgcca ccagcgccac tgcgatcaat gcgggtatcc actgcgccat
    13801 ctccgggaac cagaactgga cataaacgcc aatggcggtg atttctgaga tccccacggc
    13861 catccacata aaccagtaag accaggcggt gagataacca aaaaacgggc tcatataacg
    13921 atgcgcataa acggcgaacg aaccggtaac cggttcgagg aacaacattt cgcccattga
    13981 acgcatgatg aaaaagacga acagcccggc gatgatatag gccaacaata cggatggccc
    14041 ggcccatttc agggtactgg cggcccccat aaacaggccg acgccaatgg tgccccccag
    14101 ggcgatgagt tcgatatgtc gagcttccag cccacgctgt agctctggtt tgttatctgc
    14161 cataaatcct cgtgttgtgt ttgcatgctt tccggtgtta ccggttatcg ttatgggtac
    14221 atcgagtgtt gcgaatgttt tcgtaattca ggaaaaatgg caaataaagc attaaaaatt
    14281 tgaatgcttt gtgtaataaa aaagcagaca ggcgacgaag tgaccactcc gtcgctttac
    14341 aaagagagga aaatcagagg ttgccggtgt agtgccagcg taaataacgc agcaaacgaa
    14401 gctgacgctt aatgcggctc ggctgcgaaa gcaggcggta gagccactcc agtcccagcg
    14461 tttgccagat tttcggtgcg cgttttacgt gaccggtgaa aacatcgtaa gtcccgccaa
    14521 cgcccatata cagcgcatct ggatgcacca gacggcagtc gcgcatgaag atctcctgct
    14581 ttggcgatcc catcgcaacg gtgacgattt gcgctccgct ggcatgaatg cgttcaaaca
    14641 gcgcctgacg ctgctcgggt ttaaaataac catcctgact gccaacgata ttcacattcc
    14701 attggttgcg cagtttagct tcagtttgcg ccagcacttc aggtttaccg cccacaagaa
    14761 ataccggcgt cccttctttg cctgcgcgcg ccatcagctc ttcccagaga tcggcaccgg
    14821 caacgcggga aacctgcgcc tgcgggtact ttttacgtac tgaacgtaca acgctgatgc
    14881 catccgcata tttaaattcg gcagcgttaa ttaactccct gacctcggcg ttatcttcaa
    14941 tggtcagcat tttttcggca ttaatggcaa ccagcgttcc ctgcttaagc tgcccgtcag
    15001 caaacagata atcgagggcg tgctgcatat cacgccaacc aatcaactgt aagccacgca
    15061 gcgtataggt cggtgccgtg gtgttgttat tcattgttat ccttcaacct gcgtccagag
    15121 cgatgatttt gtacgtttat gaatgagtcc ggcgctttca aaaagccagt acaacagttt
    15181 tgcgatcatc agacatgcgc cgaagaccac gataaaaaag actacgcgtg agacaaacga
    15241 atccagccct tcacgtgcca gcacgatcat attgaagatc gccccaaagc agaaactgtg
    15301 caatatcgca gccttatagc gattagtctc gcggttgccc agctcataca gccagtcgaa
    15361 ccatttgatg atcagtccaa ccacaatcgc cccgagtggg atgaacaacg cgccgcccat
    15421 caccaccagt gagcctataa gcgtaggcga gatcgccagt ccggagtggt tattcagcac
    15481 ttcccaggta aagtaattgg ctgagttcag caccatactc gggcgccccg gccacagcca
    15541 ggaagggata aagacataga aatcgcggac aattggagcc aggccctgga agtcgatgtt
    15601 gtcgtagttc tgcaacagca acgccagatt ctcccacggt gaaaaggtgt cgcgagtgag
    15661 atagagaaac gtatagaacg cttcatcgcc gctcacattc attccatagc gttttaacgc
    15721 cagccagaac atgccaacaa tccccagcac gcccgccgcc gccagcatcc acaacgaaat
    15781 ccagccgcga ataatgccaa taaacaggaa gatagcgaat gcgatgatga tattggcgcg
    15841 agtgccgccg acaatcatat aagtcagcaa gccaaaggcg accgtgctga cgaggaaaaa
    15901 cagccatgct ttgctgtcct ggcgcagaaa gtagaccacc agcatcgccg ggatgaaaaa
    15961 gtaaaagaag cgttttaacg ccacgccgga gacttcactg gaaaagatct gactgtagga
    16021 gttaagccgg aacagcaaaa agccgttgtg catgaagaag atgccgacgc ttaccagcgc
    16081 gatacccatc aggatcaccc acgtaagatt ggtctccacg cggttcatgg taaatagcgg
    16141 acggcgcggt acatcagcaa cgcgtttgcg taggcggggt ttgtaggtga cgtagtaaac
    16201 cgcgtagaag cagcccgcag aaagcaacgc ctgcaacaag atttctggcg gcgcgacacc
    16261 aacatcaaag cgaaatacca gcacgctggt cagcgggaag ccgaagaaaa aggtgagtaa
    16321 aaacagcaat gaaaagaaga cattgaagtt aaagcgcaca cgccgaaact caaaccaggt
    16381 cagcgtggca ataaacagcg tgcagagcag ccagacaaca aacaggccac tgaattgcag
    16441 cagactcatg caacctcccc gacggcaatc gccaacgccc gctgccagcc ttgcagatag
    16501 ttcgggctaa agaaggcaat ggtgttttta tccaccgacg ccaactggcg ctgcgcttca
    16561 cgcacaatat cctcgttgag atcgtcggta gtaaacagca ccggtaaatg ctgttccgtc
    16621 atatcctgcc agaacggatt ttcccggtta agcacacaag gaatgcccgc ctgaatcagt
    16681 aagcacagcg taccaatgcc ctgctggcga gcaaaaataa agtaaccaag atcgcactga
    16741 cgaagtagcg tcagataggc gtcaaattcc agtttttcgc tcagaacttg cagattttct
    16801 tcgctgaata actccagccc cgcctgacga acttcctcga tgtacgcttc gttattaggc
    16861 ggatatccca tcggcaccac cacttttacc gtatcgccaa attgctgatg aacggcgcgc
    16921 aaggcagcaa tatggtcatt gctgcggtca ccggagttcc ccaccagaat ggtcattttc
    16981 ccttcacgtt gccgatcgtt cgccatcgta ttgagagaag ggtccatccg cgtcgggaag
    17041 tacagcagtt cgccccgcac ctttggatgc gttttggcaa aaaagctcaa atcaccgcgg
    17101 gtggcaaata cacagccgac tcgcttttgc gccaggcgac gtagcgggta aaaaagctta
    17161 tatctcaagc cactggaaag ctcatacagg tctgcccccc agatatgcca gaaaaactgg
    17221 ctgggcttaa tgccaccact cagcagagcc agccacagtg tgggattgaa ctgaccgtgg
    17281 aaaaaaaatc gctgctgacg gttagctttt gctttcgcga tgaccgcttc cgccagcgat
    17341 tttttcccag ggaaaaattg cacagaaagc gccggacagc tatcacttaa gccgtcgtcc
    17401 ttgccaacaa ccataaactc gcgcgcgtgc tcgctcgtcg cggccagcgc gtcattgaaa
    17461 aaccgcaaaa cggttcggtt atggtgaggg atatccgatc ccagtacgtg aatcagtaca
    17521 gtcatgcccg cctacgccag agtaaaaaca cgccacaaca aagagaaaaa tagacgatat
    17581 aagttgccat atatgcctgc gccgcgccca gtgcaccatg cgcagggatt agccagtggg
    17641 caaataccat caataaagtg aactggctga tttccgccag aatataaaac cgcaatgacg
    17701 ctttggcgat caccagataa ccaaagacat aagcgcccac ttttaacaca tcacccacca
    17761 actgccaggc aaagagatcg cgcatagcgg taaatttatt cgacaacagc agccagatag
    17821 caaaatcacg cagcaaccag acggtaaaac tcaccgccgc cactgccggt aagacgaatt
    17881 ttagcgattt aaccacttcc cgggtgatat cgcgcttttc cgttagccgc gacaacgtgg
    17941 gcagcaaata tacgctgaac gatgccgtaa taaattgcag gtaggcatcg gaaatactgc
    18001 tcaccccttg ccagatcccc acttcatccc agctatactg cgccgccagc agtttacgca
    18061 tcatgatgta agcaacaggc aaggtcaccg acgtaatcaa cgccatgagc gtaaatttgc
    18121 tcaactgccc tgccagaccg ttatcccagc tgggtttcag atagcttaac gggatgacac
    18181 cacgtttgat caacatgatg gcggcaggaa ttaccaccag cgcgggaatc agcgccagac
    18241 ccagcaacgc cccttcataa ccgcccaaac ggtaactgac gtagtacgcg agaacgccaa
    18301 tcaagctgcc gacaatcagc gataacgcat tacctgcggc atcgcgaaag cctttcatca
    18361 gcgccagtaa caggttgccc caggcgatcc ccatttgcac cagcgccact aaacgcacca
    18421 gcccctgata gtcggtatta ccaaacaatc cctggctgat tggcgcagct gccagcacaa
    18481 aaaccagcgc catcagcgta gagaaaccaa gtaccatcgc tgatgaagtg ccgaccacgc
    18541 ggcgcagctg ttgcggatta tcatggtact gggcaacgta tttggttaca ccgttaaaga
    18601 tgccagcccc ggcaagcacg ccgagcacgg taatcaactg gcggaaattt gccgccagcc
    18661 caagccccgc cggaccaaat gacaccgcca gcaacttacc gaccagtaac ccggcaccaa
    18721 tcttgaccag tgtactggcc gtcgtccaca aggacgcttt tgccaacgac atatcaggag
    18781 aagtagttca acaaagtcgc aattaccgta cgctgattga cgggcgacag gttgtagaac
    18841 agcggcaggc gcagcaggcg ctcgctctct ttggtggtgt agcgatcttc accgtggaac
    18901 tcaccaaagc gttccaccgc agggcaaccg tgcagcggaa tgtaatggaa caccgccatg
    18961 atttccgctt ctttcagaaa gttaatcaac gcgctccggt catcaatatc ccgcagttta
    19021 atgtagaaca tatgcgcgtt ctgcacgcag ccatcgggaa tcgacggcag ctcgatacgc
    19081 ccggctttcg ccagaggtgc taacgcatcg tagtagtttt gccacagcgc cagacgttgc
    19141 tggttgatac gatccgctgc ttccagttgc gcccacaggt acgcagcttg cagatcggac
    19201 atcaaatagc tggagccgat atcgcgccag gtatatttat cgacctggcc acggaagaac
    19261 tggctgcggt tagtgccttt ttcacggatg atctcggctc gttcgatcaa cgctttatcg
    19321 ttaatcagcg tcgcgccgcc ttcaccaccc gccgtgtagt ttttggtttc gtggaagcta
    19381 aagcagccaa tatgaccaat ggttcccagt gcacgccctt tgtaagtgga catcacgccc
    19441 tgagcggcat cttctaccac aaacagatta tgctttttcg ccaacgccat aatggtgtcc
    19501 atttcgcagg ccacgcccgc gtaatggacc ggcacgataa cgcgcgtttt gtcggtgatc
    19561 gccgcttcaa tcaacgtttc gtcgatgttc atggtgtccg ggcgaacatc cacaaaaacg
    19621 atttttgcgc cacgcagcac aaaggcattg gcggtggaga caaaggtgta gctcggcatg
    19681 atcacttcat cgccaggctg gatatcgagc agcagcgccg ccatctccag cgaagcggtg
    19741 caggacggcg tcagtaacac tttggcgctg ccaaaacgtt gctccagcca ctgctggcag
    19801 cgacgggtaa aaccgccatc gccacacagt ttgccgctac ccattgccga ctgcatatag
    19861 tcgagttcgg ttcccaccac cggcggtgcg ttaaatggaa tcatgtgatc acctgtataa
    19921 ccagtacgcg gtgctttcta cattcgcacc actttgtatg tatcgtttaa gcgcggcggt
    19981 gttgcccatt tgggtcgcca cccgcaaagt tgttttaccg cgagcatacg cccagtttag
    20041 cgccgtttgc atcagctcag cacctgcacc gcgtccagcc agcaggccaa ttcgcgcatc
    20101 tgtcgcattg agttcccgta aagagacata gccgcgaata tcgccggacg ccgcacgtaa
    20161 aatcagacat tgatgatcaa aggtgccgcg cacggcattt tcaatccact gtgcataaaa
    20221 gcgtccgctg gcgtcaggcg cataccacgg cgcacgaaaa cggctttgcg caaatgctgc
    20281 gctggctaac tgacgtaatg cgggaatatc ggtctcttgt gccactacag caccactatc
    20341 actgacattg ttcacgggta gcgccaaatc aacttcacct tcgaccaggg agaatcccag
    20401 ctgttgcagt gcatccagtt cacccgtatt tgatgccgca attttggcct gcacccgtga
    20461 ccatggcgct aaggcgtctg acgtcaggag cggtgcttca gacgtaatgc gcacgatggc
    20521 gctgttaaca ccaaagaagg cgttttccca ggttagtggc tcaatactgg cgcggacggg
    20581 cacgaagtaa ctccagcaga tattggccgt agccagtttt cgctaatgaa ctggcagcac
    20641 gcttcacacc ctcgtcatcg agccagccgt tacgccaggc gatctcttcc aggcaggcaa
    20701 tcttaaagcc ctggcgtttt tctactgtct gcacaaaagt gctggcctca atcaggctgt
    20761 cgtgagtgcc ggtatccagc caggcaaatc cgcgcccgag cagttcaacg gtcaggttgc
    20821 ccgcctcgag gtacatctgg ttgatggagg taatctccag ttcaccgcgc tccgacggct
    20881 tcacctgctt tgcgtactcc acgactttac tgtcgtagaa ataaagcccg gtcaccgccc
    20941 agtttgactt cggctgtttt ggcttttctt ccagcgagat agcgcggaaa ttgtcgtcaa
    21001 actccaccac gccaaagcgt tccgggtcca tcacctgata gccaaaaacc gtcgcccctt
    21061 ccgtgcgcgc cgcaacatga cgcagcttcg gactgaagcc ctgaccgaag aagatgttat
    21121 cgcccaacac cagacaagaa ggttcaccat taaggaaggt ttcaccgatg ataaaggcct
    21181 gcgccagacc gtccgggctg ggctgttcgg catattccag ctggataccg aactcactgc
    21241 cgtcacccag caggcgctgg aaataacctt tatcttccgg cgtagtgatg atgagaattt
    21301 cgcggatacc ggccagcatc agcaccgaca gcggatagta aatcattggc ttatcgtaaa
    21361 tcggcaacag ttgcttcgat acgccgcgcg taatcggatg caatcgggtg ccggaaccgc
    21421 ccgccaggat aatacctttc atgtttgcct ccgctgaaaa ttagcctttc agacctaaac
    21481 gctcgccctg atagctgccg tcctgcacct gcttccacca gctttcatta gccagatacc
    21541 actgcaccgt tttacgcatt ccactttcaa aggtttcctg cggcagccag ccaagttcac
    21601 gggcaatttt cgaagcatca atggcatagc gcagatcatg ccccggacgg tcagcgacaa
    21661 aggtgatcaa gtcacgatag tgcaccacgc cgtgcggctt gttcggagcc agttcttcca
    21721 gcagctcgca aatggtttcc acaacatcga gattcttacg ctcgttgtga ccaccgatat
    21781 tataggtttc accgactttc ccggtggtcg ccacgcaata cagcgcgcgg gcgtgatctt
    21841 caacatacag ccagtcacgg atttgctgcc cgttgccata taccggcagc ggtttacccg
    21901 ccagcgcgtt gaggatcatc agcgggatca gtttttccgg aaagtggtaa ggaccgtagt
    21961 tattcgagca gttggtgatc agcgtcggca gaccgtaggt ccgcagccag gcgcgcacca
    22021 gatggtcgct gctggctttt gacgcggaat aagggctgct cggcgcatac ggcgtggttt
    22081 cggtgaagaa atcatccgtc gagtgcaggt caccatatac ttcgtcggtg gagatatgat
    22141 gaaaacggaa cgctgatttt ttatcttccg tcagcgcatt ccagtaagcc cgcgccgctt
    22201 caagcaatgt ataagtcccg acaatgttgg tttcaataaa cgctgccggg ccgtcaatag
    22261 aacggtcaac atggctttcg gctgccagat gcatgacaca gtctggctga tgcgcagtga
    22321 atacgcgtgc cagttctgcc cgatcgcaga tatcaacttt ctcaaaggca aagcgctcgc
    22381 tttgcgcgac cggtgccagc gacatcaggt ttccggcgta ggtcagctta tcgaccacta
    22441 ccaccgcgtc gctcgtttcg ttgatgatat aacgcaccag cgccgagcca ataaacccgg
    22501 caccacctgt tatcagaatt tttctcatca gcgccagact cctttggcat cgacgacata
    22561 ctgctgatgg acattgtcgc cattgataac tttgaactgg ctatgatcga ccagcatcac
    22621 cagcacatct gccgttgcca gcgcctcgtc aagctgcgcc agagtacaaa gcccggtcag
    22681 ttttttcggc aactggtgga tgttaggctc aacaaccaga gtttcgccgc tatgccactg
    22741 ggcgatcagt tcagcgattt ccatcgccgg gctttcgcgc aggtcatcaa tattcggttt
    22801 aaacgccaga ccaaagcagg cgattttcag ttcactggcg cgtttatcgg tagccgccag
    22861 gcaatcagcc accgccgctt tcacctgatc gataacccag aacggtttgt gatcgttcac
    22921 ttcgcgcgcg gtacggataa gccgcgcctg ctgggggttc tgtgccacga taaaccacgg
    22981 atcaacagca atgcagtgac cgcccacgcc agggccaggc tgaagaatat taacgcgagg
    23041 gtgacgattc gccaggcgaa tcagttccca gacgttaatc ccctgatcgg cacaaatcag
    23101 cgacaattca ttagcaaaag cgatattcac atcgcggaag ctgttttcgg tgagcttaca
    23161 catttccgcc gtccgcgagt tagtgacgac acactcacct tcgaggaaaa ttttgtacag
    23221 ttcgctggcg cgggccgaac aaaccggcgt cataccacca atcacgcgat cgtttttaat
    23281 cagctcgacc ataacctggc ccggtaacac gcgttccggg cagtaagcaa tgttgacgtc
    23341 cgcctgctcg cccacctgct gtgggaaagt gagatccgga cgcatctctg ctaaccattc
    23401 tgccatcttc tcggttgacc ccaccggcga ggtggattca aggatcacca gcgcgccttt
    23461 tttcagcact ggcgcaatgg agcgagcagc cgattcaacg taggtcatat ctggctcatg
    23521 atcgccttta aacggcgtgg gtacagcaat cagccaggca tccgcttcaa ctggcgtcgt
    23581 gctcgctcgt aaaaaaccgc cttctacggc agtttttact acgctcgcca aatcaggctc
    23641 gacgatatgg atttcgccac gattgatggt atcaaccgcg tgttggttga tatcgacacc
    23701 aatcacctgt ttttgccgtg aggcaaacgc tgctgctgta ggcagcccga tgtaacccag
    23761 tccgataaca gaaatggtcg caaaactcat agtgatatcc gattattttt taacgcttcc
    23821 agaatgcgag agcatgcctg accatcacca tacgggttat gggcgcggct catagtttga
    23881 tattcgtttt cgtcttttaa aagacgcgtc acttcctcga caattcgctg cttatccgtg
    23941 cctaccagac gcaccgtacc cgccgtcacc gcttccggac gctcagtggt atcgcgcatc
    24001 accagcaccg gtttccccag cgaaggcgct tcttcctgaa tgccgcctga gtcggtcaaa
    24061 atcagccagg cgtggttcat cagccagaca aacggtaaat actcctgggg atcgatcaga
    24121 atgacatttt tcacatgccc cagaatgcga ttgaccggct ctctgacgtt cgggttgaga
    24181 tgcaccggat agacaatctg gatgtcctgg tgcgtggtgg cgatgtctgc caacgcgtgg
    24241 cagatttctt caaagccacg accgaaactc tcacgcctgt gaccggtcac cagaatcatc
    24301 tttttatcgg ggtcgataaa cgggtaattt gccgcaagtt ctgaacgcag cgtgtcgctg
    24361 ctcatcacct gatcacgcac ccataacagt gcatcaatga ctgtattacc agtaatgaag
    24421 attctgctat ccgcaacgtt ttcacgcagc aagttttgcc gggaagtttc ggttggagag
    24481 aagtgataca tcgccagatg cccggtcaat gtacggttag cctcttccgg ccacggcgaa
    24541 tagagatcgc ccgtgcgcag accagcctca acgtgaccaa caggaatacg ctgataaaac
    24601 gccgccaggc tggttgccag cgtcgtcgtt gtgtcgccgt gaaccagcac gacgtctggt
    24661 ttgaactcgg caagaatagg ttttagccct tccagaatcc gacaggttat ctctgtcagg
    24721 ccctgtcctg gctgcattat gttgagatcg tagtcaggta caatggaaaa gagtttcagc
    24781 acctgatcga gcatctcccg atgctgcgca gtgacgcaaa ctttagcctc aaaaaaagga
    24841 gcttttgcca acgcatgcac caacggagcc atcttgatgg cttccgggcg cgtaccaaat
    24901 acagtcagta ctttcacatc gattctcttc gaataagcgg cgagcgcctt tgcgctcacc
    24961 gcagcagtgt tgctatttcg agcaacggcg ggttaatgcg acaccagccc cgatcagccc
    25021 cccgacaatg ccccacataa tcatcaggaa ggcacgacgt gggctatcgc gttttaccgg
    25081 ttcttccggc gtacgcaaat agcgataggt ctgaaaacgc ggatccaggg ttggaccaac
    25141 attcagggtg tttaacatgg cccgattctg atcatagtcg agatcaaagg ccggaccgac
    25201 ggcctgtaaa ttttccagtc gagcctggag cattggacgc ccaagcagga acatttctga
    25261 atcaggtaat tcctcggcag gcacatctgt cgcactacgc gaaatattat gctgctcagc
    25321 aattttcagc gcctgctcaa tgctgttcat ccggcggtcg tagatggctt tcgccacctc
    25381 ttcctgacgc ttcacctgag ctttcatctg gatggtgcgt gccgcccatg cgcctttcag
    25441 ttcatcattc agatggctgg ctgcacgctg gctggcaaaa gcaacatact gacgtaacag
    25501 gttattagcg tcaggcgcag tttcggcaat cagcttcacg ctgtcattga ccgcgcgggt
    25561 aaagtctccg gggataaact ggatgttgtt aatcatttca tccagcaacg ccgcatcagc
    25621 tttgctgttg cccaccatcc gctgtttgta atagtcggtt tgcagccaga actctctgcg
    25681 ggtatcccac gaggccagtt gcataacaaa ctctttatag gcttcgtcca tgaccgatgg
    25741 ttggtcggca gaagccatgt ttgaacggac atccaggtta cgcaaaaatt gctgctgcga
    25801 gtaatatccc cccagcatat tcaccgttgg acgatcggta atcgccgtcg agctccactc
    25861 ctgacgagca aaaaaagtat acgccagcgc gattaacgca aacgccagcc ccatgccaat
    25921 aatccatagc ttcccagccc acaaggtacg aaacaaccca cgaatatcca gttcattttc
    25981 agcgtcttcg gccggtttcc caggcattgg ttgtgtcatc acatcctcat ttatttggtt
    26041 aaattggggc tgccaccacg atttctacgc agtctgcgtt ttacgcgctt aataaagcga
    26101 gcaactttcc aggcacgctt aatgcaatat ccatagagga agaatgctag caaaaagagc
    26161 accagcatga cccactccgg gacaaaatga gaatattctg ccagcacgcc aatggaagcg
    26221 agcagtgctg cggcaagggt aatcagcaca aacgcctgac gggaagtaaa cccggcacgc
    26281 atgatcaaat ggtgaatatg ctgacggtca ggagagaatg ggctcatgcc tttacgcagg
    26341 cgacggtaca taatcgccac catatccatt agcggaatgg cgattatcca caaagcggta
    26401 accgggctga tgggatgggt tttgccctgg gtcgtttcga gcaggatcca gataacggta
    26461 aaaccaatca gcgtactgcc cgcatcaccc ataaagactt tgtagcggcg acccaggata
    26521 ccaaggttaa gcatgatgta tggcaggatg gcggcgatca tcgcaaagca ccagattgcg
    26581 aggctggttt gcccgtcgaa ccacaaaatc ataccgattg ctgcaaacga gacgcaggac
    26641 aacccgccca gcaagccatc aatgccatca accatgttga acgcattaat ggccgcccag
    26701 acggcaaata gcgtcaggaa gtaaccaaac ggtccgagca ccatctccca ggagccaaag
    26761 atataaccca ggctactgag ataaagtttg ccgaacacca tcataacaat gccaacagcg
    26821 gcctgtatgg tggcacggat ttttacgctg atatcaaaac ggtcatccag cgcgccaatg
    26881 aaaacaagca caccggcaca agcgagatag agagatgcat gcggaatata gtaatcgaca
    26941 attccgaacg tgaagcaaat ccctgcgtaa accgaaatcc ccccaacgag aggtatcaat
    27001 ccctggtgac gtttgcggaa gtttggttta tccactaaac cgactttttt tgccacctta
    27061 cgggcaaaaa acagaaacag tgtcgtgaat aaaaaaatac tgatgagatc agtactcact
    27121 gtcagtaaat tcacaatgca tgctctcaga gaaaattatt agcagaagta taaccacgaa
    27181 gacctttatt cagaagggaa agtccgttcc gaacccacca gccctgtgca aaaattaacc
    27241 atttgatatg caaattgcat aacacgccag caaattccag gaattttcct aacatcgcca
    27301 gcgcggcatt aagattacag atataaaagc aaaacgccac gtaaacacgt ggcgtttttg
    27361 gcataagaca aatttatgag cgtttcatca tttcgaagaa atcgtcattg gtcttggtca
    27421 tggccagttt attaatgagg aattccattg catcgatttc gcccatcggg tgaatgattt
    27481 tgcgcaggat ccacattttc tgcagttctt cctgagtagt gagcagttct tctttacggg
    27541 taccggaacg gttgtagtcg atagccggga agacgcgttt ttcagcgatc ttacgagaga
    27601 ggtgcagttc catgttgcct gtacctttaa actcttcgta gataacttcg tccattttag
    27661 aaccggtatc gataagcgcc gtcgcgataa tggtcaggct gccgccctct tccacgttac
    27721 gcgccgcacc aaagaagcgt ttcggacgat gcagggcgtt ggcatccaca ccaccggtca
    27781 acactttacc tgacgccgga acaacggtgt tgtaagcgcg cgccagacga gtgatggagt
    27841 cgagcagaat gataacgtct ttcttgtgct caaccaggcg tttggccttc tcgatcacca
    27901 tttccgcaac ctgaacgtgg cgagatgcgg gttcgtcaaa ggtagaagca acaacttcac
    27961 cttttaccag acgctgcatc tcggttactt cttccggacg ttcgtcgatc agcagaacca
    28021 tcagcacaca atccgggtgg ttgtaagcaa tgctctgagc aatgttctgc agcagcatgg
    28081 ttttaccggc tttcggcggt gccacaatca gaccacgctg accacgaccg ataggtgatg
    28141 ccagatccag tacgcgagca gttaaatctt cagtagaacc gttaccacgt tccatacgca
    28201 gacgagagtt tgcgtgcagc ggggttaagt tctcaaagag gattttgttg cgggcgtttt
    28261 caggtttgtc gaagttaacc tcgttaactt tcagcagcgc aaaatagcgt tcaccttctt
    28321 tcggcgggcg aatcttacca gagatggtat caccagtgcg gaggttgaaa cggcggattt
    28381 ggctagggga aacgtagatg tcatcaggac cggcgaggta ggagctgtct gcggaacgga
    28441 ggaaaccaaa tccatcctgc aatatctcca gtacgccatc accaaagata tcttcgccac
    28501 tctttgcgtg ctgcttcagg atggcaaaaa taatgtcctg cttacgcata cgagccaggt
    28561 tttccagccc catattttcg ccgagagtga tcagctcaga aaccggcgta ttctttaatt
    28621 cggtaagatt catagtggtg tgagttctta aacttggggt aaatctcgaa cttaatgttg
    28681 tgaatggtat ggcaggatca tccatgcctg tttacggtca tcgactcatg tcttttcgct
    28741 gcctggtcac aggagagtac gcagaactga aacgacaaga cggattgagt gacgagccag
    28801 aaatctgttc acttcgcatt taagataaaa cgggaagcgt tggaaattac aagattcaaa
    28861 cttaataagg tatgtttaat acgaagtcaa cactaagtta gcatgactca cgccgggcgt
    28921 ccagttttta gcgacggggc acccgaacat gaaattccct tacgccaggt tagcgtcgag
    28981 gaactctttc aactgacctt tagacagtgc gcccactttg gttgccgcca cttcaccgtt
    29041 tttgaacagc agcagagtcg ggataccacg gatgccatat ttcggcgcag tgccagggtt
    29101 ttgatcgatg ttcagttttg caacggtcag tttgccctga tattcgtcag cgatttcatc
    29161 cagaatcggg gcgatcattt tgcacggacc gcaccactct gcccagaaat cgacgaggat
    29221 cgccccgtcc gctttgagta catccgtgtc aaaactgtcg tcagtcaggt gaataatttt
    29281 atcgctcata tataactcca caggaataag cctggcgtgt tggtttcgtt gttggtgtaa
    29341 cattaaccaa ctaaaggttg actttatttc accggatacg ctttcgtaaa gcaatagtaa
    29401 gctgatattc taccacacta tgagcaaaac acatttaaca gaacagaagt tttccgactt
    29461 cgccctgcat ccgaaggttg tagaagccct tgaaaaaaaa gggtttcata actgtacgcc
    29521 cattcaggca ctggcccttc cgctgacgct ggcgggtcgt gacgtagccg ggcaggcgca
    29581 aaccggtacc gggaaaacga tggcgtttct tacgtcaacg tttcattatc ttctctctca
    29641 tcctgcgatt gccgatcgca aggtgaatca accgcgtgcc ttaattatgg caccgacgca
    29701 tgaacttgcc gtgcagatcc atgccgacgc agaaccgctg gcggaagcta ctggcctgaa
    29761 gctgggtctg gcttacggtg gtgatggcta cgacaaacag ctgaaagtgc tggaaagcgg
    29821 cgttgacatt ctgattggca ccacgggtcg tttaattgac tacgccaagc agaaccacat
    29881 taacctcggt gccattcagg tagtggtact ggacgaagcc gatcgcatgt acgatctggg
    29941 ctttattaaa gatatccgct ggctgttccg ccgtatgccg cctgcaaacc agcgcctcaa
    30001 catgctgttc tccgccacgc tttcgtaccg ggtacgtgaa ctggcgttcg agcagatgaa
    30061 taatgccgaa tatattgaag tggaaccgga acagaaaaca ggccaccgta ttaaagaaga
    30121 gcttttctac ccttctaacg aagaaaaaat gcgtttgctg caaacgctga tcgaagaaga
    30181 gtggccagac agagcgatta ttttcgccaa taccaaacac cgttgtgaag agatctgggg
    30241 ccacctggcg gcagatggtc atcgtgtcgg tttgttgaca ggcgatgtcg cgcagaaaaa
    30301 acgtctgcgt attcttgatg aatttacccg tggcgatctg gatattctgg ttgccaccga
    30361 cgttgccgcg cgtggtttgc atatcccggc tgtgacacac gtctttaact acgatttacc
    30421 cgatgactgt gaagattacg ttcaccgtat tggtcgtaca ggccgcgcag gcgcaagcgg
    30481 tcactctatt agcctggcgt gtgaagagta tgcattgaat ttgcctgcta ttgagaccta
    30541 tattggtcac tcaattccgg taagcaaata caatccggac gcattgatga ccgatctgcc
    30601 aaaaccgctg cgcctcacgc gcccgcgcac aggcaatggt ccgcgtcgta ctggcgctcc
    30661 gcgtaatcgt cgtcgttcag gttaaataaa atgtcatact caaaatcatt caaactgtat
    30721 caagatggca agagaatgaa tcccgatgag cttactgtag taagtgattc gggtgaaaga
    30781 atgcagccaa cacagagaca gattgaagga tgaagagtat gggttccacc tcgtcgctgt
    30841 atgcagccat tgatctcggt tcgaatagtt ttcatatgct ggttgtgcgc gaggtggctg
    30901 gaagcatcca gacgctgacg cgaattaaac gcaaagtgcg tctggctgct ggcctgaata
    30961 gcgaaaatgc cctctctaat gaagcaatgg agcgcggttg gcaatgtctg cgcctgtttg
    31021 ctgaacgtct gcaagatatc cctccctcgc aaattcgcgt tgtcgccacg gcgacattac
    31081 gccttgccgt caatgcgggt gattttatta ccaaagcaca ggaaatcctc ggttgtccgg
    31141 tacaggtgat cagcggtgaa gaggaagcac gtctgattta tcagggcgtt gctcacacaa
    31201 ctggcggtgc cgatcagcgc ctggtggtgg atatcggcgg tgccagtacg gaactggtaa
    31261 ccggcacggg tgcacaaact acctcgttgt tcagcctgtc aatgggctgc gtcacctggc
    31321 tggaacgcta ttttgccgat cgtaatctgg ggcaggaaaa ttttgatgct gcagaaaaag
    31381 cggcacgcga agtgttacgt ccggttgccg atgaattacg gtatcacggc tggaaagtgt
    31441 gcgttggcgc ttccggcacc gtgcaggcgt tacaggaaat catgatggca caggggatgg
    31501 atgaacgcat taccctagaa aagttgcagc aactgaaaca gcgcgccatt cattgcggtc
    31561 ggctggaaga gctggagatt gacgggctga cgctggaacg cgcgttagtg ttcccgagtg
    31621 gtctggcgat cctgatcgcc atttttaccg aactgaatat tcagtgtatg accctggcgg
    31681 gcggtgcgct gcgtgaaggc ctggtctacg gcatgttgca tctggccgtc gagcaagata
    31741 ttcgcagccg tacgctgcgt aatattcaac gccgctttat gatcgatatt gatcaggcac
    31801 agcgcgtagc caaagttgcg gctaacttct tcgatcaggt ggaaaacgaa tggcatcttg
    31861 aagcaataag ccgcgatttg ctcatcagcg cctgtcaact tcatgaaatc ggcctgagcg
    31921 ttgacttcaa acaagcgccg caacacgctg cttatctggt gcgtaatctg gatcttcccg
    31981 gttttacccc cgcacagaaa aaattgctgg cgacgctact gctcaaccag actaatccgg
    32041 tcgatctctc atcgctgcat cagcaaaatg ccgtaccgcc gcgcgtcgca gaacaactct
    32101 gccgtttact ccgcctggct atcatttttg ccagccgtcg ccgtgacgat ctcgtgccag
    32161 agatgacatt aaaggctaac catgaactgt tgaccttgac gcttccgcaa ggttggctaa
    32221 cccaacatcc gctgggtaaa gagattattg ctcaggaaag ccagtggcag agctatgtcc
    32281 actggccgct ggaagtgcat taatgagtaa gtgccggatg cgatgctgac gcatcttttc
    32341 cggccttgat tatttccctc gttttgccgc catcatcgct ttcagattcg ccagatggct
    32401 ttgccctttc tgcatccgtt cttcggcgct gaccactttg cgctcctgtt cccaaatcag
    32461 atcatcctgc ggcagctcca gcaaaaagcg gctcggctcc gggcgcacca gttcgccgta
    32521 ctgacgacgt tctttacaca gcgtaaaggt caattccttc tgggcgcggg taatgccgac
    32581 ataggccagc cgccgctcct catcgatatt atcttcatcg atactgctct ggtgcggcaa
    32641 aaacccttct tccatgccga ccatgtagac ataaggaaac tccagccctt tcgacgcgtg
    32701 gagagtcatc agttgcacct gatccagctc ttcttcactc tcaccacgct ccatcatgtc
    32761 gcgcaaagta aagcgcgtca ccacctgggt gagcgtcatc ggctcatcca gttcgctgcc
    32821 ttccagcatc tccgtcatcc agctaaacag ttggttgacg ttcttcatgc gcatttcggc
    32881 agctttcggg ctgggcgatg tttcgtacag ccaggattca taatccatgc cgtggatcag
    32941 atcgcgcacc gcggcaatcg gctcccgctc cgccagacgc tggatttctg ccaaccagtg
    33001 agtgaagcgg gtcaatgctt cataaccacg tccgctaagc gtctgactca ggcccatatc
    33061 aaagctggcg gtaaacatgc ttttattgcg cgtcatcgcc cactcaccca gctttttcag
    33121 cgtcgccggg ccaatctctc gcttcggcgt gttaacgata cgcagaaatg cgctgtcatc
    33181 gtccgggtta gtcagcacgc gcagataagc cagcaagtcc ttgatttcag gacgagagaa
    33241 aaacgacgta ccactagaaa ttttgtacgg gatgcggttt tgcatcagga atttttcaaa
    33301 cacccgcgac tgatggttac cgcgataaag aatggcgtaa tctttgtact gcgttttatt
    33361 gacgaagtga tgcgcaatca gttcaccggt gacgcgctcg gcttcatgtt cctcgttatt
    33421 cgcgcttaaa acttttagct ctgtgccgta acccagttcg gagaacagac gcttttcaaa
    33481 gacgtgcgga ttattggcga tcaggatgtt cgccgctttc aaaatacgtc cggaagagcg
    33541 gtagttctgc tcaagcttaa tcaccttcag cgccggaaaa tcctgactca gcagcaccag
    33601 gttttgcgga cgtgcgccgc gccaggagta gatcgactgg tcatcgtcac ccaccacggt
    33661 aaagcgcgcg cggctgccca ccagcagttt caccagctca tactggctgg tgttggtgtc
    33721 ctgatactca tccaccagca ggtagcgaat tttgttctgc cagcgctcgc ggacttcttc
    33781 attgcgttgc agaagtagcg tcggcaataa aatcagatca tcgaaatcga gcacattaca
    33841 ggctttcagg tgtgcatcat acagcccata acaatgggca aaaatacggt cccgctcgcc
    33901 aatcgcactg gctgccgcct gggacggtgt tttgagatcg ttcttccagt tagagatggt
    33961 cgaaatcaac tgttgcagga gaactttgtc atcttcaatc agcccttcgg tcaactcttt
    34021 gagcaacgcc agctgatcgg tatcgtcaaa cagcgaaaag ttcgccttca tccccagcgc
    34081 cgcatactca cgcttgatga tatccagccc cagcgtgtgg aaggttgaga tcatcagccc
    34141 acgcgcctct ttgcgaccca gcgtctgtcc gacacgctct ttcatctcgc gcgccgcctt
    34201 attggtaaag gtcaccgccg cgatatgtcg cgcctgataa ccgcacccgc ggatcagatg
    34261 ggcgatttta ttggtgataa cacgagtttt accggaaccc gcgcccgcca gcaccaggca
    34321 ggggccggta acgaattcga cagcttgttg ttggccgggg tttagacgca taggtgtatt
    34381 gctcaatctt cgaacggggg gaggattgta gcagaatcgc atttgaatgt gaccgcgtgt
    34441 aagccgctaa ccggttggct gcggatgttt aaatcagaga gggaagaccg aaaccggagt
    34501 taatcgtgaa tccattagac ttagaaaata tcgggtcgta acgttgtgtt attacttttt
    34561 cagagtttac taaggagagg tttactcgtg gcgattaatt tcagccctat ggttggtgaa
    34621 atactggaat gcaactttgg taactatcct gttagccaga atggacagtt cagcaccacg
    34681 tattacgatg gccgcattcc tcctgaaatg ataaaaaaca ggttagttgt cgtgctcaac
    34741 ggaaaaatta atggcaacgc atgtatcgtc gttccattat caaccactcg cgatcatgac
    34801 aagttaaatc gtggaatgca tgttgaaata gccagtaatg ttatcaatga cctgcaattc
    34861 tttgatcagc agattcgttg ggccaaagcc gacctggtac aacaagtcag tcgaaaccga
    34921 ttaaacagag caaggactta cagagggtat cttaatcaat gtttgccaca tgagttggtt
    34981 gcagacatac agagggcggt catcaagtca atcaatgcca tatcgctcat aaattgacaa
    35041 taaaatcacc atccccgata atgactctgt agcccataga ggccctaagt tttctcccct
    35101 tgagggacct gcgaagcccg gattttccgg gcttttgcca tatatgtacc agcccccccc
    35161 tgactgacaa ttacgttagc atctgcggat catgctaaaa tcgccgcctg acaattattc
    35221 actcaaggca cgatcatggc aaaaacagca gcagcactgc atatccttgt aaaagaagag
    35281 aaactggctc tggatcttct cgagcagatt aagaacggtg ccgatttcgg caagctggcg
    35341 aagaaacact ccatttgccc atcaggcaaa cgcggcggtg atttaggtga attccgccag
    35401 ggtcagatgg ttccggcgtt cgataaagta gttttctctt gtccggtact ggagccgact
    35461 ggcccgctgc atacccagtt cggttaccac atcattaagg tgctttaccg taactaacag
    35521 caaggccttc tccaggagaa ggccttgaac tctgaatcgc tattaacccg caacagcaat
    35581 gcgtttcata tctgtcatat agccgcgcag ttttttacct acctgctcaa tcgcatggct
    35641 gcgaatcgct tcatttacat cacgcagctg cgcattatct accgcacctt ccggaatagc
    35701 tttacccagg tcgcccggtt gcagttctgc cataaacggt ttcagcagcg gcacacaagc
    35761 gtaagagaac agatagttac cgtactcggc agtatcagag ataaccacgt tcatttcata
    35821 cagacgctta cgggcgatgg tgttggcaat cagcggcagt tcgtgcagtg attcataata
    35881 tgcagactct tcaatgatgc cggaatcgac catggtttcg aacgccagtt caacgcccgc
    35941 tttcaccatc gcgatcatca gtacgccttt atcgaagtac tcctgctcgc cgattttacc
    36001 ttcatactgc agcgcggttt cgaacgcagt tttgccggtc tcttcacgcc aggtcagcag
    36061 tttcttatcg tcgttggccc agtccgccat catgccggag gagaattcgc cggagatgat
    36121 gtcgtccata tgtttctgga acaggggtgc catgatctct ttcagctgtt cagacagcgc
    36181 gtaagcacgc agtttcgccg ggttagagag acggtccatc atcagggtga tgccgccctg
    36241 tttcagcgct tcagtgatgg tttcccaacc gaactgaatc agtttttctg cgtatgccgg
    36301 atcggtgcct tcttccacca gcttgtcgaa gcacagcaga gagccagcct gcaacatacc
    36361 gcacaggatg gtttgctcac ccatcaggtc agatttcact tccgcaacga aggacgattc
    36421 cagcacgccc gcacggtgac caccggttgc tgccgcccat gctttagcga tcgccatacc
    36481 ttcgcctttc ggatcgtttt ccgggtgaac ggcaatcagc gtcggtacgc cgaatccacg
    36541 tttgtactct tcacgcactt cggtgccagg gcatttcggc gcaaccatga ctacggtgat
    36601 atctttacgg atctgctcgc ccacttcgac gatgttgaaa ccgtgcgagt aacccagcgc
    36661 cgcgccgtct ttcatcagtg gctgtacggt gcgcactaca tcagagtgct gcttgtccgg
    36721 cgtcaggtta accaccagat ccgcctgtgg gatcagttct tcgtaagtac ccactttaaa
    36781 accattttcg gtcgctttac gccaggacgc gcgcttctcg gcaatcgctt ctttacgcag
    36841 agcgtaggag atatcgagac cagaatcacg catgttcagg ccctggttca gaccctgtgc
    36901 gccacagccg acgatgacta cttttttacc ctgaaggtag ctcgcgccat cggcgaattc
    36961 atagcgcccc ataaagcgac atttgcccag ctgtgccagc tgctggcgca gattcagtgt
    37021 attgaagtag ttagccatgg tgattcctcg tgatgttgtg cttcttattg ttcggttcgc
    37081 gtttgcgaga ttgaattcac tatatgacag gaaatttatt gcggaaattg atatattcac
    37141 aacgtcacat tgcaatttct gcaacgtcaa cattgagggc tgcgccattg gatttacgcg
    37201 atctgaaaac cttcctgcat ctggcggaaa gccgccattt tggccgcagc gcgcgggcga
    37261 tgcacgttag cccatccacg ctctcacggc agattcagcg cctggaagaa gatcttggtc
    37321 agccgctatt tgtgcgcgat aaccgcacgg taacgctgac ggaagcgggc gaagagctgc
    37381 gcgttttcgc ccagcaaacg ctgttgcagt atcagcagct gcgccacacc atcgatcagc
    37441 aagggccgtc gctctctggc gaattacata tcttctgctc ggtgactgct gcctacagcc
    37501 atctgccgcc gattctggat cgcttccgcg cggaacaccc gtcggtggag attaaactca
    37561 ccactggtga tgcggcggat gcgatggaaa aggtcgtcac cggcgaagcg gatctggcga
    37621 ttgccgggaa accggagacg ctacccggcg ctgtggcgtt ttcgatgctg gagaatctgg
    37681 cggtagtgct gattgcgccc gcgctgccct gcccggtgcg taatcaggtc tcggtagaga
    37741 agccggattg gtcaacagta ccgtttatca tggccgatca ggggccagta cgccgccgca
    37801 ttgaactgtg gtttcgacgc aataaaatca gcaacccaat gatttacgcc acggttggcg
    37861 ggcatgaagc gatggtatcg atggtggcgc tcggctgtgg tgtggcgctg ttgccggaag
    37921 tggtgctgga aaacagcccg gagcctgtac gcaaccgggt aatgatttta gatcgcagcg
    37981 atgagaaaac gccgtttgaa ctgggggtgt gtgcacaaaa aaagcggctg catgagccgc
    38041 tgattgaggc gttctggagg attttgccga accacaaatg acgttgtcgc gcgggtaggc
    38101 ctgataagcg aagcgctatc aggcattttt ccctaacccg ccaaaaagaa cctgaacgcc
    38161 gggttattgg tttcgtcgtg gcaatcgtag cccagctcat tcagccgggt ttcgaaatcc
    38221 ggttcatggt cgccaagttc gaacgccgcc agtacgcgcc cgtagtcggt gccatggctg
    38281 cgatagtgga acaaagaaat gttccagtgc gtacccagcg tgttgaggaa gcgcagcagc
    38341 gcgcccggtg attccgggaa ttcgaagctg tagaggcgtt cctgcaacgg atgcgatgga
    38401 cgtccgccga ccatatagcg cacatgcagc ttcgccattt cgtcgtcgga gagatcaacc
    38461 acgctgtagc cgccgtcgtt gagcatctgc aaaatttctt tgcgctcttc gaggccgcgg
    38521 ctcaggcgca caccgacaaa gatgcaggcg tttttggcat cggcaaaacg gtagttgaac
    38581 tcggtgaccg aacgcccgcc aagcagttgg cagaatttga ggaagctgcc tttttcttcc
    38641 ggaatggtca ccgccaacaa cgcttcacgc tgttcgccca gttcgcagcg ttctgagacg
    38701 tagcgcaggc cgtggaagtt cacgttggca ccggaaagaa tatgcgccag ccgttcgccg
    38761 cgaatgttgt gcagggcgat atattttttc attcccgcca gcgccagcgc gccagagggt
    38821 tccgccaccg cgcgcacatc ttcgaataaa tccttcatcg ccgcacagat cgcatcgcta
    38881 tcgacggtga tgatgtcgtc gagatactcc tggcataaac ggaaggtttc gtcaccgatg
    38941 cgttttaccg cgacaccttc ggcgaacagt cccacgcgtg gcagatcaac cggatgaccc
    39001 gcatccagcg ctgctttcag gcaggcggag tcttccgctt ctacggcgat cactttgatt
    39061 tgtggcatca gttgtttgat cagcaccgct acgcctgccg ccagaccacc gccgccgact
    39121 ggcacaaata cacggtcgag atgggcatcc tgctggagca gttccagcgc cagcgtacct
    39181 tgcccggcta tcaccatcgg atggtcgaac ggcggcaccc aggtgaagcc ctgctgctgg
    39241 gacagatcga tcgctttggc tttcgcttcg tcaaagttcg cgccatgaag cagcacttcg
    39301 ccgccgaatc cacgtaccgc atcgactttg atatcggcgg tggcggttgg catgacgatc
    39361 agcgccttca cgcctaaccg tgcggaagaa aacgcgacgc cctgcgcgtg gttacccgca
    39421 gaagcagtga tcacgccgtg cgctttctgt tcttccgtca ggcccgccat catggcgtat
    39481 gcgccgcgca gcttaaagct atgaactggc tgacgatctt cgcgcttcac cagaatgacg
    39541 ttatcaagac gagacgagag cttttccatt ttttgtagcg gcgtgacctg cgccgcttcg
    39601 tagaccggcg cgcgcagcac cgctcttaaa tattcggcac cttccggagc accggacagg
    39661 ggttgtgagt cagccatcat taacccccca gtttcgattt atcgcgcacc gcacctttgt
    39721 cggcgctggt cgccaggctg gcgtaggcac gcagggcaaa ggaaacctga cgttcacggt
    39781 ttttcggcat ccaggctttg tcaccccgag cttcctgcgc ttcacgacgc gccgccagtt
    39841 cggcatcgct tacctgtaac tgaatgccac ggttcgggat gtcgatagcg atcaggtcac
    39901 catcttcaat cagaccaatg ctgccgccgc ttgccgcttc cggtgagacg tggccgatgg
    39961 aaagaccaga ggtgccgcca gagaaacgac cgtcggtgat cagcgcacag gctttaccga
    40021 gacccattga tttcaggaag ctggttgggt agagcatttc ctgcatgcca gggccgcctt
    40081 tcgggccttc atagcggatc accaccacat cgcccgcgac aactttgcca ccgaggatcg
    40141 cttctaccgc gtcgtcctgg ctttcgtaca ctttcgccgg gccggtgaat ttgaggatgc
    40201 tgtcatcgac gcccgcggtt ttcacgatgc agccgttttc agcaaaatta ccgtagagca
    40261 ccgccaggcc gccgtctttg ctgtaggcgt gttccagcga gcggatacag ccgtttgcgc
    40321 gatcgtcatc gagagaatcc caacggcaat cctgcgagaa tgcctgtgta gtacgaatgc
    40381 ccgcagggcc tgcgcggaac atatttttta ccgagtcatc ctgggtcagc ataacgtcgt
    40441 attgttccag agtttgcggc aacgtcaggc caagtacgtt tttcacatca cggttcagta
    40501 accccgctcg atccagttca ccgagaatac cgataacacc accagcacgg tgaacatctt
    40561 ccatatggta tttttgggtg ctcggcgcaa ctttgcataa ctgcgggact ttacgcgaaa
    40621 gtttgtcgat atcactcatg gtgaagtcga tttccgcttc ctgcgccgcc gccagcaggt
    40681 gaagtaccgt gttggtagag ccgcccatcg cgatatccag cgtcatggca ttttcaaacg
    40741 ccgctttgct agcaatattg cgcggcagtg cactttcgtc gttttgctcg tagtaacgtt
    40801 tggtcaattc aacaatgcgt ttaccggcat tgaggaacaa ctgcttacgg tccgcgtggg
    40861 ttgccagcag cgaaccgttg cccggctgcg acaggcccag cgcttcggtc aggcagttca
    40921 ttgagttagc ggtaaacatc ccggagcagg agccgcaggt cggacacgcg gaacgttcaa
    40981 cctgatcgct ctgggagtca gaaactttcg ggtctgcgcc ctggatcatc gcatcaacca
    41041 gatcgagttt gattatctga tcggacagtt tggttttccc ggcctccatc gggccgccgg
    41101 aaacaaagat caccggaata ttcaggcgca gggaagccat cagcatcccc ggggtgattt
    41161 tgtcgcagtt agagatgcag accatggcgt cggcgcagtg ggcgttgacc atatactcaa
    41221 cggaatcagc gatcagttcg cgagatggca gtgaataaag catccccccg tggcccatgg
    41281 caatcccatc atccaccgca atggtgttga actctttggc aacgccgcca gccgcttcaa
    41341 tttgttcggc gaccagttta ccgagatcgc gcagatggac gtgacccggt acaaattggg
    41401 tgaacgagtt cacaaccgcg ataatcggct tgccaaaatc ggcgtcggtc attccggtgg
    41461 cgcgccacag cgcacgagca cccgccatat tacgaccatg agtggtggtg gcggaacggt
    41521 acttaggcat actttattta ctcccagtgt ctgtctcgta aatgggacgg tgcgtgccgt
    41581 cccatttttt gtatttattg attaacttga tctaaccagc cccatttatc ttcggtttcg
    41641 ccagtgaaga ggccgaagaa ggcttgctga atgcgtttgg taaccgggcc acaacggcct
    41701 tcgccaacct gaataccgtc tacgctgcgc actggcgtga tttctgccgc agtaccggac
    41761 ataaacactt catccgccag gtacagggat tcgcgcgaca gcacctgctc acgtacttca
    41821 attcccagct cttttgccag tttgatgatg gcatcacggg taatacccgg cagcgcggag
    41881 gaggtgaacg gtggggtgaa cagcacgccg tctttcactt caaacaggtt ttcgcctgcg
    41941 ccttcagaga tataaccgtt cacatccagc gcgatacctt cctgataacc gtggcggcgc
    42001 gcttcgctac ccaccagcag ggaagagagg tagttaccac cggcttttgc tgcggttggg
    42061 atggtgtttg gtgctgcgcg gttccaggag gaaaccatcg catcgatccc ctgctccagc
    42121 gcttctgcgc ccagatacgc tccccacggg aaagcggcga taatcacatc ggttgagtat
    42181 cccgctggcg ggtttactcc catgccaaca tcaccgacga agatcagcgg acggatatag
    42241 gcgctggtga gattgttttt gcggatcacg tcacgacaag cttccatcag ctcatcaatg
    42301 ctctgtgaaa ccgggaagcg atagattttg gcggagtcat gcagacgctg catatgctca
    42361 cgatggcgga atacaaccgg tcctttgtgt gagtcgtagc aacggatgcc ttcaaaaacc
    42421 gaggtgccat agtgcagcgc gtgcgacatc acatgcacct tcgcgtcttc ccagcgaacc
    42481 atctccccat tgaaccaaat gtaatcagct ttcttcgtgg tcatttttat attccttttg
    42541 cgctcaggcg cggatttgtt gtgatgtggt tgtgctctgg cagatggcaa cgtgtgcgac
    42601 gtccaccagt ttatttaact gactaaacag taagtcgacc gaccgtgggc tggcaacggt
    42661 caattcgata tttatatttt gtgcatcgct ggcggcagcc atattcattg agcagacgtg
    42721 gaaaccacga tgacgcacca cgcgtaaaac acgttctaag gtttccggat tgaagcgagc
    42781 cgatacattg acctgatgtt gcatcatgat aatttctcca acatttctga attactggca
    42841 cctggcggca ccagcggcca gacgttctca agttcgtcga ttgagacatg aagcaggtat
    42901 ggcccatcac tgttcagcat ggtgtcgagt gccgcttcaa cctggtcttt acgggtgatg
    42961 tgttggccag ggatgccgaa ggcgctggct aacatgagga aatcggggtt atcggtaagg
    43021 gtggtttcgc tgtatcgttc ctgaaaaaac agttgctgcc attgtcgaac catccctaac
    43081 cgttggttat cgagtaagac gattttcaac ggtaactgct tgcgttttac ggtgcccagc
    43141 tcttgcacat tcatcatgaa agagccgtca ccggagatac agacaacggt atcgttcggt
    43201 cgcgcgactt gtgcgccaac tgccgccggt aaaccaaaac ccatggtacc taagccgctg
    43261 gaggtgatga aattttccgg gcgagtgtgg gcgatgtgct gcgcagccca catctggtgc
    43321 tgccccacat ctgtggtcac gacacaatcc gcaggtttac gatccgacag ttgttttaac
    43381 aacaacggcg cgtagatagc gtcaccggga tggtcgtaac gccaggaatg ttcatcacgc
    43441 agctgcgcgc agtgttgctg ccagtcattg atatttaacg gctgctgtaa tgctggtaac
    43501 agagcattta aatcaccttg taatgccaca tgtgcctgac gcagcttgtt catttctgcc
    43561 gggtcgatat ccatatggat aacactggcg tgtggtgcga aggtgttcag tttgccggtc
    43621 acccggtcat caaaacgtgc acccacggcg atcagcaggt cacacacctg caccgcgaag
    43681 tttgccgctt tggttccgtg catccccagc atgcccagat agtacggata atctgcttct
    43741 actgcgccca gccctttcag cgtacaggtg gcaggcattt ttgtggcagc gagaaattca
    43801 cgcaaagccg gaactgcctg cgccatcccc acgccaccgc caacgtacag catcggtttt
    43861 tgcgcttttg ccagcatctg gcgcgcttgc tcgacttcgg catgtgggaa agtcacttcg
    43921 ttttcaacgg tggtgaacca cggttccaga tcgccactgg ctaactggat atcttttggg
    43981 atatcgacca gaaccggacc aggacgacct gagctggcaa cgtcgaatgc ttcagccatg
    44041 atgcgcggca actcttccag cgactgcacc agaaagctgt gcttggtaca ggctaacgac
    44101 aatcccagga catccacttc ctgaaatgcg tcggtgccga taaacggtgc ggacacctga
    44161 ccagtgatgg caacgacagg gatggaatct aacagtgcgt ccgcaagccc ggttatcagg
    44221 ttggttgcac ccggaccaga cgtggcgata catacgccag ttttaccggt agcacgggca
    44281 taaccgatag ccgccattgc cgcaccctgc tcatgtcggc acagcaagtg ctccacgccg
    44341 ccgtcataca atgcatcgta aaccggcata attgcgccac ccggataacc gaaaacggtg
    44401 ttcacaccct gtgcccgcaa cgcatgtacc acccactgtg cgccattcat agttagttcc
    44461 ccgtcctgaa tcttgagaaa cagaattttg tgctgttatt cattgtctgc tcctcggtta
    44521 tgtttttaag gtcaaaaaaa acccccggac ctttcggtgc gggggtctta gttcgttaag
    44581 gcttgatctc taagcctttc ctcgtccaag tgcagccccg cacggtggga taataatcac
    44641 caccacgcta attacgacca ggctaatcac tcgtagaagg gctgtcattt tgtcttttct
    44701 tgcatcttgt tcgaaggaat gcctaaagag ttaccataga ttttgcgaat agcacaagat
    44761 atttttgggc ctatttttat gatggcttta ataatttcaa tagaaattgt tgttttttaa
    44821 aaagaaaata gtgagtgaaa aaaattcaat ttcagtataa atgttgttcc cttcctcgta
    44881 gttcatcctt tgtccgctgc atttttgcga gcatcattcc accgccagaa caactcaact
    44941 tcacttgcac aaataaacag gaatcagcca ctaaaattca cgaattagcg ggctacagca
    45001 gcgatatctt atgcacataa tggtgactca aggagggttt atgtcactgt caattgttca
    45061 tacccgcgca gccctgggag taaatgcgcc cccaatcact gttgaggtac atatcagtaa
    45121 aggtctaccc ggcttaacga tggtgggctt accagaaaca acggtgaaag aagctcgcga
    45181 tcgcgtgcgc agcgccatta tcaatagcag atatgaatat ccggcgaaaa aaatcaccat
    45241 caaccttgct ccagccgatc tgccaaaaga agggggacga tatgatttac ctatcgccat
    45301 tgcgttgctg gcggcctcag aacagcttac agccaataag ttagatgaat atgaattagt
    45361 cggagaacta gcgcttacag gcgctctgcg tggcgttccc ggtgcaatct ccagtgcaac
    45421 tgaagctatt aagtcgggca gaaaaattat cgtcgcgaaa gataacgaag atgaagtggg
    45481 gctaattaac ggtgaaggat gcctgatagc cgatcatctg caggctgtct gtgcgtttct
    45541 ggaaggtaag aacactctcg aacgcccgaa accaactgat gcagtatccc gggcgctaca
    45601 acatgatctc agtgatgttg tcggtcagga gcaaggaaaa cgaggactgg aaattaccgc
    45661 cgctggtggg cacaaccttt tactgattgg gccgccggga acaggtaaaa caatgctcgc
    45721 cagccgtatt aatggcctgt tgccagattt aagcaatgaa gaggcactgg agagcgctgc
    45781 gatattaagt ctggtaaatg ctgaatcagt acaaaaacaa tggcggcagc gcccgttccg
    45841 ctcacctcat cacagtgcgt cgttaactgc gatggtgggc ggtggtgcaa ttccagggcc
    45901 aggtgaaatt tcgttggcgc ataacggcgt gctttttctt gatgagctac ctgaatttga
    45961 acggcgtaca ctggatgcct tgcgagagcc gattgaatcc gggcagatcc atctttcacg
    46021 cacacgagca aaaataacct atccagcccg tttccagctt gttgcggcga tgaatcccag
    46081 ccctaccgga cattatcagg gaaaccataa ccgctgcacg ccagaacaga cattacgtta
    46141 tctcaaccgg ctctcggggc cctttctcga ccgcttcgat ctctcactgg agatcccatt
    46201 accacccccc ggcattttga gtaaaacggt agtgccggga gaaagcagcg ccaccgttaa
    46261 acaacgcgta atggccgcca gagaacgcca atttaagcgg cagaataaac tgaatgcctg
    46321 gctggatagt ccggaaatac gccaattctg caaacttgag agcgaagatg cgatgtggtt
    46381 ggaagaaacg ctgatccatc tggggttatc gattcgtgcc tggcagcggt tactgaaagt
    46441 tgcacgaacc attgctgata ttgatcagtc tgacattatc acacgtcagc atttgcagga
    46501 ggcagttagc tatcgtgcga ttgaccgttt gctcatccat ctgcaaaaac tactgacata
    46561 aaaaaagggc atttcgccct ttttattaat cgtcagaatc ggtgtagtct tcagcacctt
    46621 caacctgcgg tttaccgccg gaaagggtgt gaaaacgttt tggacgctta atacgcgtca
    46681 tatacttgga ccacacgcgt tctgcttctg tcactggctc acgttcgcca cggcatactg
    46741 ctacgaagag tttctcttcc tcggtaaccg gctcgcgttt gccaagatcc aactcattga
    46801 aggcataacc atgacgctca agcagttgtg cctctttgat ggtgaaatca ccatgacgag
    46861 agaatccacg tggataatgt ttattgtcga aatatcgatt agtcgtcgta aagctttccg
    46921 ccatcctgca cgctcctaat tctttgaccg agctagttat ggcgcggagt attagttacg
    46981 cttgacagag tgtaaaacaa aacatttaaa tcataacgac aaataatttt gcggagagca
    47041 ctgtggatac ggaattgtta aaaactttcc tggaagttag ccgaacgcgt cactttggtc
    47101 gagcggctga atcgctctat ctgacccagt cagcagtgag ctttcgaatc agacaactgg
    47161 aaaatcaact gggtgtgaac cttttcaccc gccacagaaa caatatccgt ttaaccgctg
    47221 ccggtgaaaa actactgcct tatgcagaaa cgctcatgag cacctggcag gccgcccgta
    47281 aggaggtggc gcatacctca cgacataacg agttttctat cggtgccagc gcctcattgt
    47341 gggaatgtat gcttaatcag tggctgggac gtttgtatca aaatcaggat gcccatacag
    47401 gcttacagtt cgaagcgcga attgcccaac ggcagtctct ggtaaaacag ctgcatgaac
    47461 gccagcttga tcttcttatt accactgaag cacctaaaat ggacgaattt agcagtcagt
    47521 tgctcgggta tttcacttta gcgctttata ccagtgcccc ttccaaacta aagggagatc
    47581 ttaactatct gcggctggag tgggggccag attttcaaca gcatgaggca ggtttgatcg
    47641 gtgctgacga agttcccatt ctgacaacca gttctgctga actggcacag caacagattg
    47701 cgatgcttaa tggttgcacc tggctacccg tcagctgggc gcgtaaaaaa ggcggcctgc
    47761 atactgttgt tgatagcaca acactttcac gaccgcttta tgccatatgg ctgcaaaata
    47821 gcgataaaaa tgcgttgatt cgcgatctat tgaaaattaa cgtgctggat gaagtgtatt
    47881 aacctgaatg gctggcaagg atgccggtag aaggatttgc ttcagagagg gttatttcag
    47941 ataaaaaaaa tccttagctt tcgctaagga tgatttctgg caggggcgga gagactcgaa
    48001 ctcccaacac ccggttttgg agaccggtgc tctaccaatt gaactacgcc cctaattagg
//
LOCUS       DAJVTL010000016        46565 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.016, whole genome shotgun sequence.
ACCESSION   DAJVTL010000016 DAJVTL010000000
VERSION     DAJVTL010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 46565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46565
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.016"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            228..1646
                     /gene="araE"
                     /locus_tag="OQQ26_000877"
     CDS             228..1646
                     /gene="araE"
                     /locus_tag="OQQ26_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-proton symporter AraE"
                     /protein_id="HCS1856429.1"
                     /translation="MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIA
                     GALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLG
                     SIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLG
                     IVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVL
                     RMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNI
                     IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVM
                     ALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKC
                     HDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETK
                     NVTLEHIERKLMAGEKLRNIGV"
     gene            1775..2467
                     /gene="ygeA"
                     /locus_tag="OQQ26_000878"
     CDS             1775..2467
                     /gene="ygeA"
                     /locus_tag="OQQ26_000878"
                     /EC_number="5.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HCS1856430.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQMLLHSVD
                     FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
                     HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
                     IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
                     IHAEDAVAFMLS"
     gene            complement(2454..3389)
                     /gene="lysR"
                     /locus_tag="OQQ26_000879"
     CDS             complement(2454..3389)
                     /gene="lysR"
                     /locus_tag="OQQ26_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator LysR"
                     /protein_id="HCS1856431.1"
                     /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
                     VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
                     TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
                     RMIVETHSAASVCAMVRAGVGVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
                     RPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA"
     gene            3511..4773
                     /gene="lysA"
                     /locus_tag="OQQ26_000880"
     CDS             3511..4773
                     /gene="lysA"
                     /locus_tag="OQQ26_000880"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HCS1856432.1"
                     /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
                     QFEVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
                     VIDQATLERVSELKIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
                     LQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
                     SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
                     TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLL
                     PEVLFDNGQARLIRRRQTIEELLALELL"
     gene            complement(4780..5811)
                     /gene="galR"
                     /locus_tag="OQQ26_000881"
     CDS             complement(4780..5811)
                     /gene="galR"
                     /locus_tag="OQQ26_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HCS1856433.1"
                     /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
                     YHPNANARALAQQTTETIGLVVGDVSDPFFGAMVKAAEQVAYHTGNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
                     RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
                     PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
                     VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
                     EASHHATSD"
     gene            6200..8359
                     /gene="aas"
                     /locus_tag="OQQ26_000882"
     CDS             6200..8359
                     /gene="aas"
                     /locus_tag="OQQ26_000882"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HCS1856434.1"
                     /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
                     LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
                     FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
                     TLHILPPTQVEMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
                     AGKKCVEDVNFTPDSYRKLLTKTLFVERILEKYSVEGERIGLMLPNAGISAAVIFGAI
                     ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPEL
                     AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
     gene            8352..9545
                     /gene="lplT"
                     /locus_tag="OQQ26_000883"
     CDS             8352..9545
                     /gene="lplT"
                     /locus_tag="OQQ26_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HCS1856435.1"
                     /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
                     FLGYTLVGVGAVAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
                     WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
                     RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKL
                     VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVLGGFFVVPLNALLQERG
                     KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWI
                     WQRRH"
     gene            complement(9577..10617)
                     /locus_tag="OQQ26_000884"
     CDS             complement(9577..10617)
                     /locus_tag="OQQ26_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HCS1856436.1"
                     /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
                     NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
                     QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
                     LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVG
                     LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAA
                     YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMEQLKTNVESLHLELNEDVLAEI
                     EAVHQVYTYPAP"
     gene            complement(10725..10943)
                     /gene="ygdR"
                     /locus_tag="OQQ26_000885"
     CDS             complement(10725..10943)
                     /gene="ygdR"
                     /locus_tag="OQQ26_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YgdR"
                     /protein_id="HCS1856437.1"
                     /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
                     DTGLVSYHDQQGNAMQINRDDVSQIIER"
     gene            complement(11059..11772)
                     /locus_tag="OQQ26_000886"
     CDS             complement(11059..11772)
                     /locus_tag="OQQ26_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCS1856438.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RAHARRLGLAGVMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
                     FFSIAVESLNLIRNKKNPL"
     gene            complement(11841..12530)
                     /gene="mutH"
                     /locus_tag="OQQ26_000887"
     CDS             complement(11841..12530)
                     /gene="mutH"
                     /locus_tag="OQQ26_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HCS1856439.1"
                     /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWGPNEEEDRQLREDWEE
                     LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
                     SALLARHFLIQ"
     gene            13215..13745
                     /gene="rppH"
                     /locus_tag="OQQ26_000888"
     CDS             13215..13745
                     /gene="rppH"
                     /locus_tag="OQQ26_000888"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HCS1856440.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
                     NTPKPQNASAYRRKRG"
     gene            13758..16004
                     /gene="ptsP"
                     /locus_tag="OQQ26_000889"
     CDS             13758..16004
                     /gene="ptsP"
                     /locus_tag="OQQ26_000889"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCS1856441.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
                     ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
                     EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
                     LAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGE
                     LLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
                     LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
                     PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
                     EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
                     YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
                     GLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLEAQLATEVRHQVAAFMERRGM
                     GGLIRGGL"
     gene            16155..17030
                     /gene="lgt"
                     /locus_tag="OQQ26_000890"
     CDS             16155..17030
                     /gene="lgt"
                     /locus_tag="OQQ26_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HCS1856442.1"
                     /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
                     HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
                     PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
                     MMVWAYRRSPQQHVS"
     gene            17037..17831
                     /gene="thyA"
                     /locus_tag="OQQ26_000891"
     CDS             17037..17831
                     /gene="thyA"
                     /locus_tag="OQQ26_000891"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HCS1856443.1"
                     /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
                     QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI"
     gene            18016..18480
                     /locus_tag="OQQ26_000892"
     CDS             18016..18480
                     /locus_tag="OQQ26_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HCS1856444.1"
                     /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
                     QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
                     EMSDLTPSLAFFGLRNRAGHIRFKNSMGEWWLVVSPWGRLRLCQQGETEGCL"
     gene            18471..19034
                     /locus_tag="OQQ26_000893"
     CDS             18471..19034
                     /locus_tag="OQQ26_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HCS1856445.1"
                     /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
                     LALEDEIWLRVFTVAKHLQRAGYCHGSCTGEGLEIVGQGDCIIVQWDANSNGIWDREP
                     VKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVL
                     TVNMRAASKSEPQTVVDASYSVTGFNL"
     gene            19031..19438
                     /locus_tag="OQQ26_000894"
     CDS             19031..19438
                     /locus_tag="OQQ26_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HCS1856446.1"
                     /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
                     LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAGTDARVCLRLLADNEALLVAGYEGVSL
                     WRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP"
     gene            19423..19746
                     /locus_tag="OQQ26_000895"
     CDS             19423..19746
                     /locus_tag="OQQ26_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HCS1856447.1"
                     /translation="MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASR
                     NQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLH
                     CPNRQ"
     gene            19759..23127
                     /gene="recC"
                     /locus_tag="OQQ26_000896"
     CDS             19759..23127
                     /gene="recC"
                     /locus_tag="OQQ26_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HCS1856448.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
                     LDRENFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGE
                     AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
                     LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
                     FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
                     LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
                     LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
                     LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD
                     DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
                     GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS
                     ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGG
                     RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
                     FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
                     IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
                     SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
                     MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDI
                     WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
     gene            23303..26191
                     /gene="ptrA"
                     /locus_tag="OQQ26_000897"
     CDS             23303..26191
                     /gene="ptrA"
                     /locus_tag="OQQ26_000897"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HCS1856449.1"
                     /translation="MPRSTWFKALLLFVALWAPLSQAETGWQPIQETIRKSDKDNRQY
                     QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
                     QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
                     KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
                     GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
                     ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
                     PQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIP
                     DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQ
                     VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
                     FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
                     TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVD
                     KKQSVIFEKAGNSTDSALAAIFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPEEFAQIQQ
                     AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQISGSQNGKAEYVHPEGWKLWENVSALQQTMPLMSEKNE"
     gene            26184..29726
                     /gene="recB"
                     /locus_tag="OQQ26_000898"
     CDS             26184..29726
                     /gene="recB"
                     /locus_tag="OQQ26_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HCS1856450.1"
                     /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
                     EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
                     ASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEE
                     TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAE
                     IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWYHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
                     PGMVNSVNKLFSQTDDAFIFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
                     CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
                     VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
                     ALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
                     RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
                     IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAED
                     LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
                     IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
                     GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
                     VQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSDRDKQVEMEFYLPISEP
                     LIASQLDALIRQFDSLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
                     DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
                     DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
     gene            29726..31552
                     /gene="recD"
                     /locus_tag="OQQ26_000899"
     CDS             29726..31552
                     /gene="recD"
                     /locus_tag="OQQ26_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HCS1856451.1"
                     /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
                     DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
                     CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
                     ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
                     ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
                     PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG
                     THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
                     IEKRLLQSGEDYIAMLEEVLAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
                     VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
                     RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
                     YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
     gene            complement(31614..32945)
                     /gene="argA"
                     /locus_tag="OQQ26_000900"
     CDS             complement(31614..32945)
                     /gene="argA"
                     /locus_tag="OQQ26_000900"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HCS1856452.1"
                     /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
                     IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
                     TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
                     IHRQLESGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
                     GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNTTIACAALYPFPEENIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS
                     GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
     gene            33177..34430
                     /gene="amiC"
                     /locus_tag="OQQ26_000901"
     CDS             33177..34430
                     /gene="amiC"
                     /locus_tag="OQQ26_000901"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiC"
                     /protein_id="HCS1856453.1"
                     /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
                     SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
                     VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
                     YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
                     ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
                     QEVAESILAGIKAYFADGATLARRG"
     gene            complement(35044..35991)
                     /locus_tag="OQQ26_000902"
                     /pseudo
     CDS             complement(35044..35991)
                     /locus_tag="OQQ26_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683247.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ImpA family N-terminal
                     domain-containing protein"
     gene            complement(35991..36419)
                     /gene="tssE"
                     /locus_tag="OQQ26_000903"
     CDS             complement(35991..36419)
                     /gene="tssE"
                     /locus_tag="OQQ26_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000106970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssE"
                     /protein_id="HCS1856454.1"
                     /translation="MSTPSLYEMLTFSFSGELPLEQVSERDQLILSVMDNMQRIINCR
                     AGTLAHLPDYGLPDLSLIHQGMAAGIHGLMRQIEETLLRYEPRLSQIQVELLPQPRPG
                     HLNYLIHAQLPDTGWIRFDGVFSPEGRIVLRHLKQQERAY"
     gene            complement(36423..36959)
                     /gene="tssJ"
                     /locus_tag="OQQ26_000904"
     CDS             complement(36423..36959)
                     /gene="tssJ"
                     /locus_tag="OQQ26_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000484007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system lipoprotein TssJ"
                     /protein_id="HCS1856455.1"
                     /translation="MFPIRFKRPALLCMAMLTVVLSGCGLIQKVVDESKSVASAVFYK
                     QIKTLHLDFFSRSALNTDAEDTPLSTMVHVWQLKTREDFDKADYDTLFMQEEKTLEKD
                     VLAKHTVWVKPEGAASLNVPLDKETQFVAIIGQFYHPDEKSDSWRLVIKRDELEVDKP
                     RSIELMRSDLRLLPLKDK"
     gene            complement(36940..38018)
                     /gene="tssG"
                     /locus_tag="OQQ26_000905"
                     /pseudo
     CDS             complement(36940..38018)
                     /gene="tssG"
                     /locus_tag="OQQ26_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000373314.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
     gene            complement(37982..39742)
                     /gene="tssF"
                     /locus_tag="OQQ26_000906"
     CDS             complement(37982..39742)
                     /gene="tssF"
                     /locus_tag="OQQ26_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001536307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HCS1856456.1"
                     /translation="MDDLTQRYYEAEMRYLREAGKEFAQAYPDRAAMLNLDKPGARDP
                     YVERLFEGFAFLMGRLREKLDDDLPELTEGLVSLLWPHYLRTIPSLSVVELSTDHRQM
                     KQSETLSDFQVLSRPVGERRTRCFYSATRDITLHPLALPDVSLQYEPDGRSVIRLRFE
                     CGPLVGDWSQIDLSRLPLYLNADSPVACALHRALTLGTQQFWLRLPGQDRRTLDAHFS
                     PMGFEDDDRLWPKGESAFSGYQLLLEYFTFREKFMFVALNGLEQVAWPEGITGFEIDV
                     VLNENWPHDLPFDSDNIRLHCVPVINLFPLEADPLHLSPLENEFLLRPMRIQDGHTEI
                     YSVDNIISSRHTGSQAYVPFSSFRHRGGMLRHDAPERYYHTRVKRGPSGLHDTWLILG
                     GDAFDADRMLEDETLSLSLTGTNGQLPRKALQSTLLDTPVHASQNVLWVRNLCAPTQP
                     CYPPARDRFHWRVLSHLGSNFLSMMDNAEILRGTLALYDWTESEMNRRRLEAIVDVQH
                     SLIQRFERGFLLRGVDIQVTLDSNGFAGEGDITLFGELLHRFFALYADIHLFTQLTLI
                     LQPTGKCLQWTEHHSQRVPG"
     gene            complement(39982..40449)
                     /locus_tag="OQQ26_000907"
     CDS             complement(39982..40449)
                     /locus_tag="OQQ26_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000217701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin immunity protein"
                     /protein_id="HCS1856457.1"
                     /translation="MTVNIEALIYSLEKSHPELIDNGVITYKTEPKGYAGSPNLNLEM
                     AKEGLFLSFRRDGKIFNEMTLYIQHDKVENWIFPNELPLPLQSKMSRKWVHETFGLPD
                     KSIPPRMIGTTMFGWVERFSIDGFHIPVTMRVAYDSDELVKSITYMPTSELRW"
     gene            complement(41656..42579)
                     /locus_tag="OQQ26_000908"
     CDS             complement(41656..42579)
                     /locus_tag="OQQ26_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001442322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HCS1856458.1"
                     /translation="MTMGRGYFLVRGDKTTCGGKIIEGADDHTIMGIPQARDMDRVTC
                     GRYPGMFIIVGGVPETDIHGRLMAGTLDSQSSCPCKARFIASMMDDTYETEEGSGTDN
                     QIAGIDQNRLNKEWTDVRGDNTQKKTKYTSEIILITSTIRVYSTNAEVMGDHSAIYFE
                     VSGDSSSPYLYDPNGSYNPYKKLENENGQRGSGFVFSGEFAKLDDFISYQENPNEVTQ
                     NKLDSEWFPYKVKLLSLPVTNDELLTIKNAALALDDGDEEPGSFSCAEWSSKLLKYII
                     PELDIYTLPNSLWEAVVKEKEKRIKLNGENK"
     gene            complement(42579..42740)
                     /locus_tag="OQQ26_000909"
                     /pseudo
     CDS             complement(42579..42740)
                     /locus_tag="OQQ26_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001299109.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion protein"
     gene            complement(42743..45805)
                     /locus_tag="OQQ26_000910"
                     /pseudo
     CDS             complement(42743..45805)
                     /locus_tag="OQQ26_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001335663.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion protein VasK"
     gene            complement(45862..46479)
                     /locus_tag="OQQ26_000911"
     CDS             complement(45862..46479)
                     /locus_tag="OQQ26_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001296339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856459.1"
                     /translation="MRALRTIWQDEWQKAGLPEARLFSAPEPGLAAVDGWLDNFIQEK
                     AVLLVISVRLEPKNPERTAESATALLLANRLTQTALTPLALLHRPERITDTEMMASGI
                     AQALDWMPVQPYAISGIWTAELDREQRAALLSLNQPFAQEALMYELDAFLGRSGPAAP
                     WLSVAAATLAAIQSQHPQLTLSGVQGGHYSWATVVSPFVSPQEAS"
BASE COUNT        10907 a        11754 c        12484 g        11420 t
ORIGIN      
        1 tcatcataat ccatatcaat taatgaactt tatgaatttt atctgcttta aaattaggtg
       61 gttaataata atctcaataa ttcaacttaa ttttaaaatt ggaatatcca tcacataacg
      121 gcatgtcgca gcaatttaat ccatatttat gctgtttccg acctgacacc tgtgtgaatt
      181 gttcacgtat tttttcacta tgtcttactc tctgctggca ggaaaaaatg gttactatca
      241 atacggaatc tgctttaacg ccacgttctt tgcgtgatac gcggcgtatg aatatgtttg
      301 tttcggtagc tgctgcggtc gcaggattgt tatttggtct tgatatcggc gtaatcgccg
      361 gagcgttgcc gttcattacc gatcactttg tgctgaccag tcgtttgcag gaatgggtgg
      421 ttagtagcat gatgctcggc gcagcaattg gtgcgctgtt taatggttgg ctgtcgttcc
      481 gcctggggcg taaatacagc ctgatggcgg gggccatcct gtttgtactc ggttctatag
      541 ggtccgcttt tgctaccagc gtagagatgt taatcgccgc tcgtgtggtg ctgggcattg
      601 ctgtcgggat cgcgtcttac accgctcctc tgtatctttc tgaaatggca agtgaaaacg
      661 ttcgcggtaa gatgatcagt atgtaccagt tgatggtcac actcggcatc gtgctggcgt
      721 ttttatccga tacagcgttc agttatagcg gtaactggcg cgcaatgttg ggggttcttg
      781 ctttaccagc agtcctgctg attattctgg tggtcttcct gccaaatagc ccgcgctggc
      841 tggcggaaaa ggggcgtcat attgaggcgg aagaagtgtt gcgtatgctg cgcgatacgt
      901 cggaaaaagc gcgagaagaa ctcaacgaaa ttcgtgaaag cctgaagtta aaacaaggcg
      961 gttgggcact gtttaagatc aaccgtaacg tccgtcgtgc tgtgtttctc ggtatgttgt
     1021 tgcaggcgat gcagcagttt accggtatga acatcatcat gtactatgcg ccgcgtatct
     1081 tcaaaatggc gggctttacg accacagaac aacagatgat tgcgactctg gtcgtgggac
     1141 tgacctttat gttcgcgacc ttcattgcgg tctttacggt agataaagca ggtcgtaaac
     1201 cggctctgaa aattggtttc agcgtgatgg cgttaggcac tctggtgctg ggctattgcc
     1261 tgatgcagtt tgataacggt acggcttcca gtggcttgtc ctggctctct gttggcatga
     1321 cgatgatgtg tattgccggt tatgcgatga gcgccgcgcc agtggtgtgg atcctgtgct
     1381 ctgaaattca gccgctgaaa tgccacgatt tcggtattac ctgttcgacg acgacaaact
     1441 gggtgtcgaa tatgattatc ggcgcgacct tcctgacact gcttgatagc attggcgctg
     1501 ccggtacgtt ctggctctac actgcgctga acattgcgtt tgtgggcatc actttctggc
     1561 tcattccgga aaccaaaaat gtcacgctgg aacatatcga acgcaaactg atggcaggcg
     1621 agaagttgag aaatatcggc gtctgatttc acgggccgga tgtgctgtac atccggccct
     1681 tttttcgtta atagagattg ggcacctagc cgttgaggcg tttgtctcgt tccttattca
     1741 gccttgttgc ggtaacacac atcaggagag aggaatgaaa acaattggtt tgctgggagg
     1801 aatgagctgg gaatccacca ttccttacta tcgtctgata aatgaaggca ttaaacagcg
     1861 gcttggtggg cttcactctg cgcaaatgct gctacatagc gtcgattttc atgaaataga
     1921 agagtgccag cgtcgcgggg aatgggataa aaccggggac attctggctg aggcggcgct
     1981 tggcttacag cgggcgggcg cagaaggtat tgtgttatgt accaatacga tgcataaagt
     2041 ggcggatgcc attgagtcac gttgcactct gcctttctta cacattgcgg atgccaccgg
     2101 acgtgcaatt accggggccg gaatgactcg tgtggcgctg ctgggtacgc gttacaccat
     2161 ggaacaggat ttttatcgcg ggcggctgac ggaacaattt tccatcaatt gtcttattcc
     2221 tgaagcggat gaacgggcga aaattaatca gattattttt gaagaactgt gtctggggca
     2281 atttaccgaa gcgtcacgcg cttattatgc gcaagtgatt gctcgccttg cagaacaggg
     2341 cgcacagggc gtcatttttg gctgcacaga aattggttta ctggtgccag aagagcgcag
     2401 tgttttgcct gtgtttgata ccgcggcgat ccatgccgag gatgctgtcg cttttatgct
     2461 gtcgtagctg acgacaaaat agcgtcaaga gaagtgacca gtttcggtaa ccccgcttgt
     2521 aaatgcccac taaacgcctg aaccagcgct gatgacgggc ggtgcagggg gcggatcagg
     2581 ctgacggtga acggaaccgc aatactgaac cgccgcacca ctaaaccgct tgccgcataa
     2641 tctagtgcgg tgagcgggtt aaccaccgaa acacctaccc ccgcccgtac cattgcgcag
     2701 actgacgcgg cgctgtgggt ttctacgatc atgcgtcgtt taacctgatg ttcagtaaat
     2761 agctgatcca gcaactggcg atagctgtca gtacgggaaa ggctgatgta gttctcaccc
     2821 tgaaaatcat ccggcgttaa tacctttttt accgccagcg gatgacccgg aggtaacaca
     2881 cacacttcat ctaaagagag taattcggta cgttctgttc ccgcaggcgt atggagcgtt
     2941 tcagtgagtc ctaaatcatg acgctgggcc gagagccact cttcaagtag cggtgattcc
     3001 tggggcacga tatttaagct gacatcggga taacgtgcca gaaagggttg caggagctgc
     3061 ggtaaaaaag attgcgaaaa gaccggcagg caggcaatag acagttctcc ctggcgaaac
     3121 tcgcgcagac tttctgcggc gctgacaatg cgatccagtc cgtaccagga tcgttgcact
     3181 tcttcaaaca gacgcagtcc ttgcacggta ggatgtaatc gtccacgtac gcgctcaaac
     3241 aatttcagcc cgatcacctt ctcaaagcgc gccagttcgc ggctgacggt tggctgtgag
     3301 gtgtgtagca ggtgtgctgc ctcagtcagg cttccggcgg tcattaccgc atgaaaaatt
     3361 tcaatatgac gtaagttaac ggcggccatt agcgctctct cgcaatccgg taatccatat
     3421 catttttgca tagactcgac ataaatcgat attttttatt ctttttatga tgtggcgtaa
     3481 tcataaaaaa gcactcatct ggagtttgtt atgccacatt cactgttcag caccgatacc
     3541 gatctcaccg ccgaaaatct gctgcgtttg cccgctgaat ttggctgccc ggtgtgggtc
     3601 tacgatgcgc aaattattcg tcggcagatt gcagcgctga aacagtttga agtggtgcgc
     3661 tttgcacaga aagcctgttc caatattcat attttgcgct taatgcgtga gcagggcgtg
     3721 aaagtggatt ccgtctcgtt aggcgaaata gagcgtgcgt tggcggcggg ttacaatccg
     3781 caaacgcacc ccgatgatat tgtttttacg gcagatgtta tcgatcaggc gacgcttgaa
     3841 cgcgtcagtg aattgaaaat tccggtgaat gcgggttctg ttgatatgct cgaccaactg
     3901 ggccaggttt cgccagggca tcgggtatgg ctgcgcgtta atccggggtt tggtcacgga
     3961 catagccaaa aaaccaatac cggtggcgaa aacagcaagc acggtatctg gtacaccgat
     4021 ctgcccgccg cactggacgt gatacaacgt catcatctgc agctagtcgg cattcacatg
     4081 cacattggtt ctggcgttga ttatgcccat ctggagcagg tgtgtggtgc tatggtgcgt
     4141 caggtcatcg aattcggtca ggatttacag gctatttctg cgggcggtgg gctttctatt
     4201 ccttatcaac agggtgaaga ggcggttgat accgaacatt attatggtct gtggaatgcc
     4261 gcgcgtgagc aaatcgctcg ccatttgggc caccctgtga aactggaaat tgaaccgggt
     4321 cgcttcctgg tagcgcagtc tggcgtatta attactcagg tgcggagcgt caaacaaatg
     4381 ggtagccgcc actttgtgct ggttgatgcc gggttcaacg atctgatgcg cccggcaatg
     4441 tacggtagtt accaccatat cagtgccctg gcagctgatg gtcgttctct ggaacacgcg
     4501 ccaacggtgg aaaccgtcgt cgccgggccg ttatgtgaat cgggcgatgt ctttacccag
     4561 caggaagggg gaaatgttga aacccgcgcc ttgccggaag tgaaggcagg tgattatctg
     4621 gtactgcatg atacaggggc atatggcgca tcaatgtcat ccaactacaa tagccgtccg
     4681 ctgttaccag aagttctgtt tgataatggt caggcgcggt tgattcgccg tcgccagacc
     4741 atcgaagaat tactggcgct ggaattgctt taactgcggt tagtcgctgg ttgcatgatg
     4801 acttgcctcc agcgacggag ttgacactga atgacgacgt accagcgtcg gactaaatac
     4861 attagtaatt tccgggagag ggcgattatc cgccagcgcc aaagccagtt cggcagcctg
     4921 ggtcgccatc gtcacgattg ggtaacgcac ggtggtcagg cgcggacgca catagcgtga
     4981 caccagcaca tcatcaaagc caattaacga aatctcaccc ggtacatcaa taccattatc
     5041 attgagaacg cccatcgcac ccgccgccat tgaatcgtta taacaggcta ccgcagtgaa
     5101 atttcttcct cgtcccaaaa gctcggtcat tgcctgttcg ccgccgcttt cgtctggttc
     5161 gccaaatgtc accagccggt cattggccgc aataccactt tcagcaaggg catcgtaata
     5221 cccttgcaga cgatcttcgg cgtcagaaat agagtggtta gagcacagat aaccaatgcg
     5281 ggtatgacct tgctgaatta aatgacgcgt agccagccag gcaccgtaac gatcgtccag
     5341 agcaatacaa cggttttcaa agccaggcag gatacggttg atcagcacca taccgggcat
     5401 ttgtttcatt aatgaggcta aatcggcatc cgggatcatt ttggcatgga cgaccaacgc
     5461 agcacagcga tggcggatca gttgctcaat ggcctgacgt tctttttgtt cgttgtggta
     5521 accattgcca atcaataaga aattaccggt gtgataagcc acctgttcgg ccgctttcac
     5581 cattgcaccg aaaaacggat cggaaacatc accaacgacc agaccgatcg tttcagtggt
     5641 ctgctgcgcc agcgcacggg cgttggcgtt cgggtgatag ctaagagact ccattgcact
     5701 atgcacagcc agccgggaag cttcgctggc tttgggtgaa ttattaatga cgcgggaaac
     5761 ggtggcgact gaaacgcctg ccagtcgggc tacatccttt atggtcgcca tgaaaatacc
     5821 ttagtgggta aacgcttaca ttgtttcagt gttacggaaa acgcccgttg gttcaagggg
     5881 cggcgtgttt tcatcgtggg aatgtgagcc aaacgcaaat aagtaagaca aaaaaagaga
     5941 ttgcaaacct ttggttacac tttgcgaaac gctgttgcga ttgaccgctg gtggcgtttg
     6001 gcttcaggtt gctaaagtgg tgatcccaga ggtattgatt ggtgagatta ttcggtacgc
     6061 tcttcgtacc ctgtctcttg caccaacctg cgcggatgcg caggtttttt ttcgcaccta
     6121 atttactgtc gctcgcgttc tttatctcgt gtaatcttcc tccattcgct tttactgaat
     6181 cagagcaaag ggagttggaa tgctttttag cttttttcga aatttgtgcc gtgttttgta
     6241 tcgcgttcgc gttacgggtg acacccaggc actgaagggc gagcgcgttc taattacgcc
     6301 taatcacgtc tcttttattg atggcatttt gcttggactg tttttacctg tgcgtccagt
     6361 gtttgccgtt tacacctcaa taagccaaca gtggtatatg cgttggctga aatcatttat
     6421 cgattttgtt cctctcgatc cgacgcaacc tatggcgatt aaacatctgg tacgcctagt
     6481 ggaacagggg cgtccggtgg tgattttccc tgaaggacgc atcaccacca caggctcgct
     6541 gatgaaaatc tacgatggcg cgggttttgt cgcggcgaag tctggtgcaa cggttattcc
     6601 tgtgcgtatt gaaggggcgg aactcacgca cttcagccgc ctgaaaggtc tggttaaacg
     6661 tcgcttgttc ccgcaaatta ctctgcatat tttgccacca acgcaggtgg agatgccgga
     6721 tgcgccgcgt gcccgtgacc gtcgcaaaat cgctggcgaa atgctgcatc aaataatgat
     6781 ggaagcgcga atggcggtgc gcccgcgtga aacgctgtac gaatctttac tgagtgcaat
     6841 gtaccgcttc ggagccggga agaaatgtgt cgaagacgtc aattttaccc cagactccta
     6901 tcgcaaattg cttacgaaaa cgctgtttgt tgaacgcatc cttgaaaaat acagtgttga
     6961 aggcgaacgc atcggcttaa tgctgcccaa tgcaggcatc agtgcggcag tgatttttgg
     7021 ggccatcgcc cgtcgccgca ttccagcaat gatgaactac actgctgggg taaaagggct
     7081 gaccagtgct attacggcgg ctgaaatcaa aaccatcttc acttcccgcc agtttctcga
     7141 taaaggcaaa ctctggcatc tgccggagca actcactcag gtgcgctggg tctatctgga
     7201 agatttaaaa gcagatgtca ccactgccga caaagtatgg atcttcgctc atttgctgat
     7261 gccgcgtctg gcacaggtta aacagcagcc ggaagaagag gcgctgatcc tttttacctc
     7321 cggttctgaa ggccatccga aaggcgtcgt ccatagccat aaaagcattc tggcgaatgt
     7381 cgagcagatt aaaacgattg ccgacttcac caccaacgat cgctttatgt cggcgttacc
     7441 gctgtttcac tcctttgggc tgacggtagg cctgtttacg ccactgctca caggtgcaga
     7501 agtgtttctt tatccaagcc cgctgcatta ccgtattgtg ccggagttgg tgtatgaccg
     7561 cagttgcacc gtgttgttcg gcacttcgac tttcctcggt cactacgcgc gtttcgccaa
     7621 cccgtatgac ttctatcgtc tacgctatgt ggtggcaggc gcagaaaaac tacaagaaag
     7681 taccaaacag ctttggcagg ataaatttgg cctgcgcatc cttgaaggct acggtgtgac
     7741 cgaatgcgcg cctgtcgttt ctatcaacgt accgatggcg gcgaaacccg gtacggtagg
     7801 gcgtattcta ccaggaatgg atgcgcgcct gttgtcggtc cctggtatcg aagagggcgg
     7861 acgcctgcaa ctgaaagggc cgaacataat gaacggctat ctgcgggtgg agaagcctgg
     7921 tgtactggaa gtgcccaccg ccgagaatgt tcgcggcgaa atggagcgcg gctggtatga
     7981 cactggcgat attgtgcgtt ttgacgagca gggctttgtg cagattcagg gccgcgcaaa
     8041 acgctttgcc aaaattgcag gcgaaatggt gtcgctggaa atggtggaac aactggcact
     8101 tggtgtttcg ccagataaag tccatgccac tgcgattaag agcgatgcca gcaaaggcga
     8161 ggcactggtg cttttcacca cagataacga actgacgcgc gataagttgc aacagtatgc
     8221 ccgcgagcac ggcgtgccgg agcttgctgt accgcgcgat attcgctatc tgaaacagat
     8281 gccattactt ggcagcggca aacctgactt tgtcacgttg aaaagctggg tagacgaagc
     8341 ggaacaacac gatgagtgag tcagtgcaca ctaacacttc gttgtggtcg aaggggatga
     8401 aagcggttat cgtggcgcag tttctctctg cgtttggcga taatgcccta ctgtttgcca
     8461 ctctggcgtt actgaaagcg cagttctatc cggagtggag ccagcccatc ctgcaaatgg
     8521 tgtttgtagg tgcttacatt ctttttgcgc cgtttgtcgg gcaggtggcg gatagcttcg
     8581 ccaaaggccg ggtgatgatg tttgccaacg gcctgaagct gctgggcgca gccagtatct
     8641 gctttggtat caatccgttt ctcggctata cgctggtggg tgttggtgct gtagcctatt
     8701 caccggcgaa atacggtatt ctcggcgaat taaccacggg tagtaagtta gtgaaagcta
     8761 acggtttaat ggaagcttct accatagcgg cgattttgct cggttccgta gccggtggtg
     8821 tgctggctga ctggcatgtc ctggttgccc tggccgcatg cgcactggcc tacggtggtg
     8881 cggtcgttgc caatatctac attcccaaac tggcggcggc gcgtccgggg cagtcctgga
     8941 atctcatcaa catgacccgc agtttcctga atgcctgcac ctcgctatgg cgcaatggtg
     9001 aaacgcgttt ttcgctggtg ggcaccagtt tattctgggg agcgggtgtc acgctgcgtt
     9061 tcctgttggt gctgtgggta ccggtggcgc tgggcattac cgataacgct acgccgacct
     9121 atctcaacgc gatggtagcg attggtatcg tggttggcgc aggtgcggca gcgaagttag
     9181 ttacgctgga aaccgtgtca cgctgtatgc cagccgggat tttgattggc gtggtggtac
     9241 tgattttttc cctgcaacac gagctgctgc cagcctatgc cttgttgatg ctgattggcg
     9301 tgctgggggg cttttttgtc gttccgctca atgcgttgct acaggagcgg ggtaaaaaaa
     9361 gcgtcggggc ggggaatgcg attgcagtac aaaaccttgg cgaaaacagc gccatgttgt
     9421 tgatgctggg catttactcg ctggcggtaa tggtaggcat cccggtcgtg cccattggca
     9481 ttggcttcgg tgcgctgttt gcgctggcaa taacggcgct gtggatctgg cagcgccgtc
     9541 attaatattt aacgccggtt ttaaccggcg ttaatcttat ggtgccggat aagtataaac
     9601 ctgatgcaca gcttcaattt cagctaatac gtcttcgttt aactccagat gcaaactttc
     9661 gacgttagtt ttcaactgct ccatcgtggt tgcgcccagc agagtgctgg caacaaacgg
     9721 ttgacggcgt acaaatgcga gcgccatttg agcagggtcc aagccatgac gtctggcaat
     9781 atcaacatac gccgcgacgg ctttttgcgt ttgctcaccg ctatagcggg tgaaccgact
     9841 aaagagcgta ttacgtgcgc cagcgggttt tgcaccattg agatatttcc cggtcagcgt
     9901 accgaaaccc aggcacgaat aggccagcag ttcgacccct tcatactggc tgacttctgc
     9961 cagacctact tcaaaactgc ggtttaacag actgtagggg ttctgaatgg tgacaatacg
    10021 cggcagatcg tgtttgtccg ccagatgcag gtagcgcatt acgccaaatg cagtttcgtt
    10081 cgacacgccg atataacgaa tttttcccgc gcgttggtac tctgccagtg cgtccagcgt
    10141 atccagcagc gaaaccgcag gcgcagaatc cgtccagcta taaccgagtt tgccgaagca
    10201 gttggtcggg cgctgcggcc agtgcacctg ataaagatcg aggtaatcag tctgtaggcg
    10261 cttgaggctg tcatgcagcg cttcgcggat attcttccga tccagcgcct gatccgggcg
    10321 gatgcccttg tcattattgc gcgacggtcc gctcactttg gaggcgataa ttaacttttc
    10381 gcggctgcca tgtttcgcca gccagttgcc gacgtaggtt tcggttaacc cttgcgtttc
    10441 ggggcgcgga ggtactgggt acatttcggc aacgtcgata aggttaatgc cctgagcgac
    10501 ggcatagtcg agttgtgcgt gggcgtcggc ttcgctgttc tgttcaccaa acgtcatcgt
    10561 gccaagcccc agcgtgctga cttccagcga actgtggggt atacggtgat attgcatagc
    10621 cgtttccttt ttataatcac gacataagga atataaaaat ggcagaggga agggaaaagg
    10681 gaaagagaaa aatcttaagg ccagccggat gctgacctta tttgttaacg ttcaataatt
    10741 tgcgaaacat catcacggtt aatttgcatc gcgttacctt gctgatcgtg ataactcacc
    10801 agcccggtat catcatcaat ttcaggtttt ccatcggtca aaatcatacg gccatctttg
    10861 gtcgccatga cgtaatcact ggaacacccg gaaacagcaa acgccagtcc gactgcagaa
    10921 attattactg cccatttttt catccggtta tcctcatttg gcccacctat gataatagtc
    10981 tgtttataaa ccgacgttat atatcttgaa agcaggaaaa tcttaaactg tgagggtaac
    11041 aggagagcgt acggagtatc agagcgggtt ctttttgttg cgaatcaggt tgaggctttc
    11101 aaccgcaata gagaagaaca tcgcgaagta gatgtaacct ttcggtacgt ggatgtcgaa
    11161 actttccaga atcagggtaa agccgaccag aatcaggaaa gagagcgcca gcatttttac
    11221 cgaaggatgg cgttcgacaa aatcaccaat cgagcgcgcg gcgaacatca tcacgcctac
    11281 ggcaatcacc acggcggcca tcataataaa caggtgatct gacagaccca cagccgtaat
    11341 caccgagtcg aggctaaaga taatatccag cagcataatc tgcacgatag cgccgaggaa
    11401 tgatgaaacg cgtgttttca gcccttcttc ttcaccttca atggattcgt ggatttcctt
    11461 gctggctttc cagataagga acaagccacc cagaagcaga atcaagtcac gggcagaaat
    11521 ttcctgactg aatattgtaa aaagcggatt tgtcaggcgc gtaacccagg cgattgatgc
    11581 cagcagcgcc agacgcataa ccatgactcc cgccaacccc agacggcgcg catgagcacg
    11641 ttgtgctgtg ggaagctttg ccaccaccag agaaaggaaa ataatattgt cgatcccaag
    11701 aacgatctcc agcagcgtca gcgtaccgag cgcaagccag gcgttaggat cggttatcca
    11761 tgcaaataac atctaaaaag ccctgccaaa aaaatgaagc ggtaattata tgcccggaaa
    11821 gcggcaggtc aaagcgatgg ctactggatc agaaaatgac gggccagtag tgcactggtg
    11881 aaattcttct tcaaataaaa gccgcgtggc agcgtcagaa tccgttcgcc ccgggcacca
    11941 atggcttcgg taagcgcttt cgcattcgct gctttcggtc gtatctgtaa atattccccg
    12001 tgacgagcgg taatccgctc aacctgaccg agaacaatca tatccattaa ttcttcccag
    12061 tcttcgcgta gctgtcggtc ttcctcttca ttcgggcccc acagtaacgg tgatccaacg
    12121 cgacgctgcg ccagcgggat gctgcgctcg ccttcaaccg gtatccacag cacgcgtttg
    12181 agcttgtggc gcacgtggct ggtttcccag gtcaccccgc tattgcccgt taacggggca
    12241 acacaaacga atgttgtttc cagcggacga ccaagactat ccacagggat agttttaagt
    12301 tccacgccca gagcagcaaa atcttgctca ggtttacttc ctgcgctggc acctagccag
    12361 atctccagta acacgccaat ccagccttta tcgcgtttta aattctctgg cgtaaccagc
    12421 ccggcaagtg ccgccagttc tcccaatgta taaccagaaa gttgctgtgc ttgcgctaac
    12481 aactgttctt cagtttcggg aggagagagc agtgggcgag gttgggacat gtcatgatac
    12541 cttggttaaa aaacaaacag taattatgtg ccgaatattc gcagtgtaac tttttccaca
    12601 tgtgttgttc aattctctga tttatattgc tttttaggct gccggtaatc gagttgcgca
    12661 acactgcaat aggttttcca aatctggtca ctgaaaataa acaggatctt acaccatgtt
    12721 atccacagaa agctgggata actgtgaaaa acctccacta ctgtttccat ttacagcctt
    12781 gacgtgcgac gaaactccag tttttagtgg ttcagtgctt aacttagtgg cacattctgt
    12841 ggataaatac ggcattggtt gatctttcgc caacccgtaa atgagaggtg tgacctgggt
    12901 cacgaattac tctttttcat tactcaaatt acatgtaatg cattgactaa taatgaatat
    12961 tttaaaatgt ctatatcggg cttattcaga atgctccggg ttttcccgta gtaattccgt
    13021 agttcttcac aactctatcc acagaaaagg tgaataaaaa cggctatcca ccccttcctc
    13081 tgtttataac tctgcacata actgtgagtt attcaattgt tattagtgtg taatgccctg
    13141 cagagagtgg tttaccgtct tcctggagta tgaaacaatc attcgtatat aaagctttat
    13201 tttgaggtag tccggtgatt gatgacgatg gctaccgccc aaacgtaggt atcgtgattt
    13261 gtaatcgcca ggggcaggta atgtgggccc ggcgatttgg tcagcactcc tggcaatttc
    13321 cgcaaggcgg aatcaacccc ggagaatccg cagagcaggc gatgtaccgt gaattgtttg
    13381 aagaagtagg attaagccgc aaagacgttc gaatccttgc ttcaacgcgt aactggttgc
    13441 gctacaaatt accgaaacgt ttggtgcgtt gggacacgaa gccggtttgt atcggccaaa
    13501 aacaaaaatg gtttctcttg cagctggtaa gcggcgatgc agaaatcaat atgcaaacca
    13561 gcagtacacc agagtttgac ggctggcgat gggtaagtta ctggtatccg gtcagacagg
    13621 tggtgtcatt taaacgtgat gtctaccgta gggtaatgaa agagttcgcg agtgtggtga
    13681 tgtcactgca ggaaaatacg ccaaaaccac aaaacgcatc tgcttatcga cgtaaaagag
    13741 gttaagtcac gccaattatg ctcactcgcc tgcgcgaaat agtcgaaaag gtagccagcg
    13801 caccacgcct gaatgaggcg ttaaatattc tggttaccga catctgtctt gcgatggata
    13861 ccgaggtctg ttcggtctac ctggccgatc atgatcgacg ttgttactac ctgatggcga
    13921 cccgggggct gaaaaaacca cgcggtcgca ctgtaacgct tgcgtttgat gaagggatcg
    13981 tcggcctggt tggcaggctg gcggaaccga taaaccttgc agatgcgcaa aagcacccca
    14041 gcttcaaata cattccctcc gtaaaagaag aacgtttccg cgcgttttta ggcgtaccaa
    14101 ttattcaacg tcgccagttg cttggtgtac tggtggtaca gcaacgagag ttgcgccagt
    14161 atgacgaaag tgaagaatcc ttcctggtga cgcttgccac ccagatggca gctattcttt
    14221 ctcagtcgca gttgactgcc ttgtttgggc aatatcgcca gacgcgaatc cgcgcattac
    14281 cggcagcacc tggtgtggcg attgccgaag gctggcagga tgccacgtta cctttaatgg
    14341 aacaggtgta tcaggcatca acgctggatc cggctctgga acgcgaacga ctgaccgggg
    14401 cgctggaaga agcggcaaac gagtttcgcc gctacagcaa acgctttgcc gccggagcac
    14461 aaaaagaaac ggcggctatt ttcgatcttt actcgcacct gctttcggac acccggctgc
    14521 gtcgcgaatt gtttgccgag gttgacaaag gctcggtggc agagtgggcg gtaaaaacgg
    14581 tcattgaaaa atttgccgaa cagtttgccg cgctaagcga taactatctc aaagagcggg
    14641 ctggcgattt acgtgcgctg ggtcagcgat tgctgtttca tcttgatgac gctaatcaag
    14701 ggccgaacgc ctggccggaa cgtttcattc tggtggcaga tgaactgtca gcgacaacgc
    14761 ttgctgagtt gccccaggat cgcttagtcg gtgttgtcgt gcgcgatggc gcagccaact
    14821 cccatgctgc gatcatggta cgtgcgctgg ggatccctac cgtgatgggc gcggatattc
    14881 agccttcggt gctgcatcgt aggacgctga tcgttgatgg ctatcgcggt gaattgttgg
    14941 tcgatccgga gccggtactg ctgcaagaat atcagcggct aattagtgaa gagattgagc
    15001 ttagccgtct ggcggaagat gacgtcaatt tacccgcgca gttaaaaagt ggcgagcgta
    15061 taaaagtcat gctcaatgcc ggtttaagcc cggaacatga agaaaaactg ggtagccgta
    15121 ttgatggcat cggtctttat cgcactgaaa tcccattcat gctgcaaagt ggtttcccgt
    15181 cggaagaaga acaggtggcg cagtatcagg ggatgctgca aatgttcaat gataaacccg
    15241 tcaccttgcg tacgctggat gtcggagcag ataagcagct gccttacatg ccgatcagcg
    15301 aagagaatcc atgcctgggt tggcgtggga ttcgcattac gctcgatcag ccggagatct
    15361 tcttgatcca ggtgcgggcg atgctgcgtg ctaatgccgc tacgggcaac ctgaatattc
    15421 tgttgccgat ggtcaccagc ctcgatgaag ttgacgaagc acgccgcctg attgaacgtg
    15481 ccggacgtga agtcgaggag atgatcggtt acgaaattcc caaaccacgt atcggtatca
    15541 tgctggaagt gccgtcaatg gtatttatgc tgccgcatct ggcaaagcgg gtcgatttca
    15601 tctctgttgg caccaacgat ctgactcaat acatactggc cgttgatcgc aacaataccc
    15661 gggtggcgaa catttatgac agccttcatc ctgcaatgtt acgagctctg gcgatgatcg
    15721 cccgggaagc ggaaatacat ggaatcgatc tccgtttgtg cggtgaaatg gcgggcgatc
    15781 ctatgtgcgt ggcaatcctc attgggcttg ggtatcgcca tctgtctatg aacggacgtt
    15841 ctgtagcgcg ggtaaaatac ctgctgcggc gcattgattt tgccgaagca gaaaatcttg
    15901 cgcagcgtag tctggaagcg caactggcga ccgaagttcg ccatcaggtt gcagccttta
    15961 tggagcgtcg cggcatgggc gggctgattc gcggagggtt atagcgcgga tcatatacat
    16021 atcttttaac ggtatccggc aaccagctag gtccccttgt gctattattc gcacctttgg
    16081 agcgcctgaa acctgcggcg cgcatttcaa tcgctgttct ctttcagcga aataacaaga
    16141 acttgtggtg acagatgact agtagctatc tgcattttcc ggagtttgat ccggtcattt
    16201 tctcaatagg acccgtggcg cttcactggt acggcctgat gtatctggtg ggtttcattt
    16261 ttgcaatgtg gctggcaaca cgtcgggcga atcgtccggg cagcggctgg accaaaaatg
    16321 aagttgaaaa cttactctat gcgggtttcc tcggcgtctt ccttggggga cgtattggtt
    16381 atgttctgtt ctacaatttc ccgcagttta tggccgatcc gctgtatctg ttccgtgtct
    16441 gggacggcgg catgtctttc cacggcggcc tgattggcgt tatcgtggtg atgattatct
    16501 tcgcccgccg tactaaacgt tccttcttcc aggtctctga ttttatcgca ccactcattc
    16561 cgtttggtct tggtgccggg cgtctgggca actttattaa cggtgaattg tggggccgcg
    16621 ttgacccgaa cttcccgttt gccatgctgt tcccaggctc ccgtacagaa gatattttgc
    16681 tgctgcaaac caacccgcag tggcaatcca ttttcgacac ttacggtgtg ctgccgcgcc
    16741 acccatcaca gctttacgaa ctgctgctgg aaggtgtggt gctgtttatt atcctcaacc
    16801 tgtatattcg taaaccgcgc ccaatgggag ctgtctcagg cttgttcctg attggctacg
    16861 gcgcgtttcg catcattgtt gagtttttcc gccagcccga cgcgcagttt accggtgcct
    16921 gggtgcagta catcagcatg gggcaaattc tttccatccc gatgattgtc gcgggtgtga
    16981 tcatgatggt ctgggcatat cgtcgcagcc cacagcaaca cgtttcctga ggaaccatga
    17041 aacagtattt agaactgatg caaaaagtgc tcgacgaagg cacacagaaa aacgaccgta
    17101 ccggaaccgg aacgctttcc atttttggtc atcagatgcg ttttaacctg caggatggat
    17161 tcccgctggt gacaactaaa cgttgccacc tgcgttccat catccatgaa ctgctgtggt
    17221 ttctgcaggg cgacactaac attgcttatc tacacgaaaa caatgtcacc atctgggacg
    17281 aatgggccga tgaaaacggc gacctcgggc cagtgtatgg taaacagtgg cgcgcctggc
    17341 caacgccaga tggtcgtcat attgaccaga tcactacggt actgaaccag ctgaaaaacg
    17401 acccggattc gcgccgcatt attgtttcag cgtggaacgt aggcgaactg gataaaatgg
    17461 cgctggcacc gtgccatgca ttcttccagt tctatgtggc agacggcaaa ctctcttgcc
    17521 agctttatca gcgctcctgt gacgtcttcc tcggcctgcc gttcaacatt gccagctacg
    17581 cgttattggt gcatatgatg gcgcagcagt gcgatctgga agtgggtgat tttgtctgga
    17641 ccggtggcga cacgcatctg tacagcaacc atatggatca aactcatctg caattaagcc
    17701 gcgaaccgcg tccgctgccg aagttgatta tcaaacgtaa acccgaatcc atcttcgact
    17761 accgtttcga agactttgag attgaaggct acgatccgca tccgggcatt aaagcgccgg
    17821 tggctatcta attacgaaac atcctgccag agccgacgcc agtgtgcgtc ggtttttttt
    17881 accctccgtt aaattcttcg agacgccttc ccgaaatttt gcaacgtcct gcaacggcgt
    17941 aaatagtccg gaagatgcgc cgaagaaata gaaactggcc ctcgtctttt tttctcctcg
    18001 ctccatactg ccggcatgaa aacacaacgt ggttatacgc tgattgaaac gctggtcgcg
    18061 atgctgattt tggtcatgct aagcgcaagt ggactctatg gctggcaata ctggcagcag
    18121 tcgcaacggc tatggcaaac cgccagccag gcgcgggact atttgctcta tttacgtgaa
    18181 gatgccaact ggcataaccg cgaccacagt atcagcgtta tcagggaggg gacgttatgg
    18241 tgccttgtga gttccgctgc tggggccaat acctgtcatg gcagttcacc attggtcttt
    18301 gtgccacgct ggcccgaagt cgaaatgagc gacctgacac cttcgcttgc tttctttggc
    18361 ctgcgcaata gggccgggca tattcgcttc aaaaactcaa tgggcgagtg gtggctggtg
    18421 gtttcgccgt ggggaagact ccggctttgt cagcaaggag aaacagaagg atgcctgtaa
    18481 aagagcaagg tttttctctg ctggaagtgt tgattgctat ggcgatcagt agcgtattgt
    18541 tgctgggggc tgcacgcttt ctgcctgcgt tacagcgtga aagtttaacg agcactcgta
    18601 agctggcact ggaagatgaa atctggctgc gggtatttac cgtcgcgaag catctccaga
    18661 gggcgggtta ttgtcatggc agctgtaccg gcgaagggct ggaaattgtc ggacagggtg
    18721 actgtatcat tgtgcagtgg gatgcgaaca gtaacggtat ctgggatcgc gaaccggtaa
    18781 aagagtccga ccagattgga tttcgtctga aggagcatgt gctggaaacg ctacgcggtg
    18841 cgacatcctg tgaaggtaag ggctgggata aagtcactaa tccggatgcc atcattatcg
    18901 acacttttca ggtcgtacgt caggatgtca gcggcttctc gccggtgttg acggttaata
    18961 tgcgtgctgc cagtaagtct gaaccgcaaa ccgtggtgga tgccagctat agcgtgacag
    19021 gattcaacct gtgaaccgcg aaaaaggtgt ttcgtcactg gctctggtcc ttatgctgct
    19081 ggttttgggt agcttgctat tgcaaggaat gagtcagcag gatcgcagtt ttgcctctcg
    19141 cgtgagcatg gaaagtcagt cattgcgccg ccaggccatc gttcagtcgg cgctggcgtg
    19201 ggggaaaatg cactcctggc agacgcagcc cgcagttcag tgctcgcagt acgctggaac
    19261 cgatgcccgg gtttgtttgc gtttactggc agataatgaa gccttattgg ttgccggtta
    19321 tgaaggcgtt tcgttgtggc gaacaggcga agtcattgat ggaaacattg ttttttcgcc
    19381 acgcggctgg agcgattttt gtccgctgaa agagagggcg ttatgtcagc ttccctgaag
    19441 aatcaacaag gctttagcct gccggaggta atgttggcga tggtgttgat ggtgatgatt
    19501 gtcactgcgt tatcgggttt ccagcgaaca ttaatgaaca gtcttgccag cagaaaccag
    19561 taccaacagc tctggcggca tggctggcag caaacgcaac tgcgcgcgat ttcgccacct
    19621 gccaactggc aggtcaaccg aatgcagaca tcgcaggcgg gatgtgtcag catcagcgtt
    19681 acgctagttt cacccggggg cagagaaggc gagatgaccc gcctgcattg cccgaatcgt
    19741 cagtagtcag gagccgctat gttaagggtc taccattcca atcgtctgga cgtgctggaa
    19801 gcgttgatgg agtttattgt cgaacgcgaa cggctggacg atcctttcga accagagatg
    19861 attctggtgc aaagtaccgg tatggcacag tggctgcaaa tgaccctgtc gcaaaagttt
    19921 ggtattgcgg caaacattga ttttccgctg cctgcgagct ttatctggga tatgttcgtc
    19981 cgggtgttac cggagatccc caaagagagc gcctttaaca aacagagcat gagctggaaa
    20041 ctgatgactc tgctgccgca attgctggat cgcgaaaact ttaccctgct gcggcattat
    20101 ctgactgacg atagcgacaa gcgaaaactg ttccagcttt cctcaaaagc ggcggacctg
    20161 tttgaccagt atctggtcta tcgcccggag tggctggcac aatgggaaac aggacatttg
    20221 gttgaagggc tgggagaagc acaggcctgg caagcgccgt tgtggaaggc gctggtggaa
    20281 tatacccatg aactcggaca accgcgctgg caccgcgcga atctctatca gcgctttatc
    20341 gaaacgctgg agtccgcgac gacctgcccg ccggggttac cttcgcgcgt ctttatatgc
    20401 ggtatttccg cgttaccgcc tgtttatctc caggcgctcc aggcgctggg taaacatatt
    20461 gaaatccatc tcctgtttac caacccctgc cgttattact ggggcgatat taaagatcct
    20521 gcttatctgg cgaaactgct gactcgtcag cgtcgacaca gttttgaaga tcgcgaattg
    20581 ccgctatttc gcgatagcga aaatgccgga cagctcttta acagcgatgg tgaacaggat
    20641 gtcggcaacc cgctgctggc ctcatggggg aagcttgggc gcgactacat ttatctcctt
    20701 tctgacctgg agagcagcca ggagctagac gcttttgtcg atgtgacgcc agataacctg
    20761 ctgcataaca ttcagtctga cattctggaa ctggaaaacc gcgccgtagc gggtgtgaac
    20821 atcgaagagt tttcccgtag cgataacaaa cgcccgcttg atccactgga tagcagtatc
    20881 acattccacg tttgccatag cccgcagcgt gaagttgaag ttttacacga tcgcttgctg
    20941 gcgatgctgg aggaagaccc gacacttact ccgcgcgaca tcatcgtgat ggtggctgat
    21001 atcgacagct acagtccgtt tattcaggca gtgtttggta gcgcacctgc ggatcgttac
    21061 ctgccttacg ccatttccga ccgtcgtgcg cggcagtcac atccggtact ggaagcgttt
    21121 atcagcctgt tatcactgcc tgacagtcgc tttgtgtcag aggatgtgct ggcgctgctg
    21181 gatgtgccgg tgctggcggc gcggtttgac atcaccgaag aagggctgcg ttatttacgc
    21241 cagtgggtca acgagtccgg cattcgttgg gggatagatg acgacaacgt tcgcgagctg
    21301 gaactccccg ctaccggtca acacacctgg cggtttggcc tgacgcgcat gttgctgggt
    21361 tacgcgatgg agagcgcgca gggcgagtgg caatcggttc taccttatga tgaatcgagc
    21421 ggcttaattg cagaactggt ggggcatctg gcttccctgc taatgcagct aaacatctgg
    21481 cgtcgcgggc tggcacagga gcgtccgcta gaagagtggt tgccggtttg tcgcgatatg
    21541 ctcaacgcct tcttcctgcc ggatgcggaa accgaagcgg cgatgacgct gatcgaacaa
    21601 caatggcagg cgattatcgc cgaaggttta ggtgcgcagt atggcgacgc ggtgccgctg
    21661 tcactattgc gtgatgaact ggcacagcgc ctggatcaag aacgtatcag ccagcgtttt
    21721 ctcgccggac cggttaacat ttgtactctg atgccaatgc gttcaattcc gttcaaagtg
    21781 gtttgcctgc tgggaatgaa cgacggcgtt tatccacgtc agcttgcgcc attgggcttt
    21841 gacctgatga gccagaaacc gaagcgtggc gaccgtagcc gtcgcgatga cgaccgctat
    21901 ctgttcctgg aagcgttaat ttccgcgcag caaaaactct atatcagcta tatcgggcgt
    21961 tccattcagg ataacagtga acgtttcccg tcggtactgg tgcaggaact gatcgactac
    22021 atcgggcaaa gtcattatct accgggcgat gaagcgctca actgtgatga aagcgaggca
    22081 agggtaaaag cgcatcttac ttgcctccat acccgaatgc cgtttgatcc acaaaactac
    22141 cagccaggcg gacgacaaag ctatgctcgt gaatggctac ctgcggccag ccaggctggt
    22201 aaagcacatt ctgaatttgt tcagccgctg ccgtttacct taccggaaac cgtgccgctg
    22261 gaaacgctac aacgattctg ggcacatccg gtgcgggcgt tcttccagat gcgtttgcag
    22321 gtgaacttcc gtactgaaga cagcgaaatc ccagacaccg agccatttat tctggaaggg
    22381 cttagccgtt atcaaatcaa tcagcagtta ttgaatgcac tggttgagca ggatgatgcc
    22441 gaacgcttgt tccgccgctt ccgggcggca ggggatttac cgtatggcgc ttttggtgaa
    22501 attttctggg aaacacagtg ccaggagatg cagcagcttg ccgacagagt cattgcctgt
    22561 cgccagccgg ggcagagtat ggaaattgat ctcgcctgca acggtgtgca gataactggc
    22621 tggttgccgc aggtgcagcc ggatggcctg ttgcgctggc gtccctcttt attaagtgtg
    22681 gcgcagggaa tgcaactttg gctggaacac cttgtctact gtgccagcgg tggtaatggc
    22741 gaaagtcgcc tttttctacg caaagacggt gagtggcgtt ttccgccgct tgcagccgaa
    22801 caggctttgc attacctctc acaactgatt gaggggtatc gtgaaggaat gtccgcgcca
    22861 ttgctggtgt tacctgaaag tggcggcgcg tggctaaaaa cctgttatga cgcgcaaaac
    22921 gatgccatgc tggatgacga ttccacgttg caaaaagccc gtacgaaatt ccttcaggct
    22981 tacgaaggca acatgatggt gcgtggcgaa ggtgatgata tctggtatca acggctctgg
    23041 cggcaattaa caccagagac aatggaggcc atcgttgaac agtcgcaacg tttcctgtta
    23101 ccgctgtttc gctttaatca gtcatgagtg ttgtataaaa attgcgcaat ctatccgctt
    23161 actttatgat gcgcaccagt cacggactga tggttatata aacataggct gactcgtgca
    23221 gcacaagatt aaattctggc agatgatttg cgttaacctg ttgaatctgt ccagaaaata
    23281 aagttgatta tgaggtccgt gaatgccccg cagcacctgg ttcaaagcat tattgttgtt
    23341 tgttgccctc tgggcaccat taagtcaggc agaaacggga tggcagccga ttcaggaaac
    23401 catccgtaaa agtgataaag ataaccgcca gtatcaggct atacgtctgg ataacggtat
    23461 ggtggtcttg ctggtttctg atccgcaggc agttaaatcg ctctcggcgc tggtagtgcc
    23521 cgttgggtcg ctggaagatc ccgaggcgta ccaggggctg gcacattacc ttgaacatat
    23581 gagtctgatg gggtcgaaaa agtacccgca ggctgacagt ctggccgaat atctcaaaat
    23641 gcacggcggt agtcacaatg ccagcactgc gccgtatcgc acggctttct atctggaagt
    23701 tgagaacgac gccttgcccg gtgcggtaga ccgcctggcc gatgctattg cagaaccctt
    23761 gctcgacaag aaatacgccg aacgtgagcg taatgcagta aacgctgaat taaccatggc
    23821 gcgtacgcgt gacgggatgc gcatggcaca ggtcagcgca gaaaccatta acccggcaca
    23881 ccccggttca aagttttctg gtggtaacct cgaaacttta agcgacaaac ctggtaatcc
    23941 ggtgcagcag gcgctgaaag atttccacga gaagtactat tccgccaatc tgatgaaggc
    24001 ggttatttac agcaataaac cgctgccgga gttggcaaaa atggcggcgg acacttttgg
    24061 tcgcgtgccg aacaaagaga gcaaaaaacc ggaaatcacc gtgccggtag tcaccgacgc
    24121 gcaaaagggc attatcattc attacgtccc ggcgctgccg cgtaaagttc tgcgcgttga
    24181 gtttcgcatc gataacaact cagcgaagtt ccgtagtaaa acggatgaat tgattaccta
    24241 tctgattggt aatcgcagcc caggtacact ttccgactgg ctgcaaaagc agggattagt
    24301 tgagggcatt agcgccaact ccgatcctat cgtcaacggc aacagcggcg tattagcgat
    24361 ctctgcgtct ttaaccgata aaggtctggc gaatcgcgat caggttgtgg cggctatttt
    24421 tagctacctc aatttgttac gtgaaaaagg gatcgataaa caatacttcg atgaactggc
    24481 gaatgtgctg gatatcgact tccgttatcc gtcaatcacc cgtgatatgg attacgtcga
    24541 atggctggca gataccatga ttcgcgttcc tgttgagcat acgctggatg cagtcaatat
    24601 tgccgatcgg tacgatgcta aagcagtaaa ggaacgtctg gcgatgatga cgccgcagaa
    24661 tgcgcgtatc tggtatatca gcccgaaaga gccgcacaac aaaacggctt actttgtcga
    24721 tgcgccgtat caggtcgata aaatcagcgc acaaactttc gccgactggc agaaaaaagc
    24781 cgccgacatt gcgctctctt tgccagagct taacccttat attcctgacg atttctcgct
    24841 gattaagtca gagaagaaat atgaccatcc agagctgatt gttgatgagt cgaatctgcg
    24901 cgtggtgtat gcgccgagcc gttattttgc cagcgagcca aaagccgatg tcagcctgat
    24961 tttgcgtaat ccgaaagcca tggacagcgc ccgcaatcag gtgatgtttg cgctcaatga
    25021 ttatctcgca gggctggcgc ttgatcagtt aagcaaccag gcgtcggttg gtggcattag
    25081 tttttccacc aacgctaaca acggccttat ggttaatgcc aatggttaca cccagcgcct
    25141 gccgcagctg ttccaggcat tgctcgaggg gtactttagc tataccgcta cggaagatca
    25201 gcttgagcag gcgaagtcct ggtataacca gatgatggat tccgcagaaa agggcaaagc
    25261 gttcgagcag gcgattatgc ccgcgcagat gctctcgcaa gtgccgtact tctcgcgaga
    25321 tgaacggcgc aaaattttgc cctccattac gttgaaagag gtgctggcct atcgcgacgc
    25381 cttaaaatca ggggctcgac cagagtttat ggttatcggc aacatgaccg aggcccaggc
    25441 aacaacgctg gcacgcgatg tgcaaaaaca gttgggcgct gatggttcag agtggtgtcg
    25501 taacaaagat gtcgtggtcg ataaaaaaca atccgtcatc tttgaaaaag ctggtaacag
    25561 caccgactcc gcactggcag cgatatttgt accgactggc tacgatgaat acaccagctc
    25621 agcctatagc tctctgttgg ggcagatcgt acagccgtgg ttctacaatc agttgcgtac
    25681 cgaagaacag ttgggctatg ccgtgtttgc gtttccaatg agcgtggggc gtcagtgggg
    25741 tatgggcttc cttttgcaaa gcaatgataa acagccttca ttcttgtggg agcgttacaa
    25801 ggcgtttttc ccaaccgcag aggcaaaatt gcgggcgatg aagccagaag agtttgcgca
    25861 aatccagcag gcggtaatta cccagatgct gcaggcaccg caaacgctcg gcgaagaagc
    25921 atcgaagtta agtaaagatt tcgatcgcgg caatatgcgc ttcgattcgc gtgataaaat
    25981 cgtggcccag ataaaactgc tgacgccgca aaaacttgct gatttcttcc atcaggcggt
    26041 ggtcgagccg caaggcatgg ctattctgtc gcagatttcc ggcagccaga acgggaaagc
    26101 cgaatatgtg catcctgaag gctggaaatt gtgggagaac gtcagcgcgt tgcagcaaac
    26161 aatgcccctg atgagtgaaa agaatgagtg atgtcgccga gacactagat cctttgcgct
    26221 tgcccttaca gggcgagcgc ctgattgaag cctctgccgg cactggcaaa acctttacga
    26281 ttgcggcgct ctatttgcgc ctgttacttg gactaggtgg ttccgccgcc tttccccgcc
    26341 cgctgaccgt tgaagaactg ctggtggtca cctttaccga ggctgccacg gcagaattgc
    26401 gcggtcgtat ccgtagcaat atccacgagt tgcgcatcgc ctgtctgcgt gaaaccaccg
    26461 acaatccact gtacgaacgc ctgctggaag agatcgacga taaagcgcaa gccgcgcagt
    26521 ggttgttgtt agccgaacgg cagatggatg aagcggcagt ctttactatt cacggctttt
    26581 gccagcgcat gctcaacctg aatgcctttg aatccggcat gctgtttgag cagcagctga
    26641 ttgaagatga gtctctgcta cgttaccagg cctgcgccga tttctggcgt cgccactgct
    26701 acccgctgcc gcgtgaaata gcccaggtcg tctttgaaac ctggaaaggg ccgcaggcgt
    26761 tgctgcgcga tattaatcgt tatctgcaag gcgaagcgcc ggttatcaaa gcaccgccgc
    26821 ccgatgatga aacgctggct tcccgccacg cgcaaattgt ggcgcgtatt gatacggtaa
    26881 aacagcagtg gcgcgacgca gtgggtgaac tggatgcgct gatcgaatct tctggtattg
    26941 atcgacgcaa gtttaaccgt agcaatcagg ctaaatggat cgaaaagatc agcgcctggg
    27001 cagaagaaga gacaaacagt tatcagttgc cggagtcgct ggaaaaattc tcccagcgtt
    27061 tcttagaaga tcgcacgaag gccggggggg aaaccccgcg acatccactg tttgaggcga
    27121 tcgatcaact gcttgcagaa ccattgtcga tccgcgattt ggtgatcacc cgcgcattgg
    27181 ctgagatccg cgaaacagta gcgcgtgaaa aacgccgccg tggcgaattg ggttttgatg
    27241 acatgttaag tcggctcgat tccgcgctgc gtagcgaaag cggtgaggtg ttggcagcgg
    27301 cgatccgtac gcgattcccg gtggcaatga tcgatgaatt tcaggatacc gacccccagc
    27361 agtaccgaat ttttcgccgt atctggtacc atcagccgga aaccgcattg ttgctaattg
    27421 gcgacccgaa gcaggccata tatgcattcc ggggtgcgga tatcttcact tatatgaagg
    27481 cgcgtagcga agttcacgcc cactacactt tagacaccaa ctggcgttcc gcaccaggaa
    27541 tggtgaacag tgtgaacaag cttttcagcc agactgatga cgcgttcata tttcgcgaaa
    27601 taccgtttat tccagtgaaa tcagccggga aaaatcaggc gttacgtttt gtatttaaag
    27661 gtgaaacgca gcctgcgatg aaaatgtggc tgatggaagg cgaaagctgc ggcgttggcg
    27721 actatcaaag taccatggca caggtatgtg ctgcgcaaat ccgcgactgg ctacaagccg
    27781 gacagcgggg cgaagcgttg ctgatgaacg gcgacgacgc gcgtccggtg cgtgcttcgg
    27841 acatcagtgt gctggtgcgc agccgccagg aggctgccca ggtgcgcgat gccttaacgt
    27901 tgctggaaat cccttccgtt tacctttcga accgcgacag tgtttttgaa actctggaag
    27961 cgcaggaaat gctttggttg ttgcaggcgg tgatgacgcc cgaacgtgag aacaccctgc
    28021 gtagtgcgct ggcaacgtca atgatggggc tgaacgcgct ggatatcgaa acgctgaata
    28081 atgacgaaca tgcgtgggac gcggtggtcg aagagttcga tggttatcgg caaatctggc
    28141 gcaaacgtgg cgttatgcca atgctgcggg cgctgatgtc ggcgcgtaac attgcagaaa
    28201 acttgctggc aacggcaggc ggtgagcggc gtcttaccga tatcttgcat atcagcgaac
    28261 tgctacaaga agccggaacg cagctggaaa gtgaacatgc gctggtacgc tggttatcgc
    28321 aacatatcct cgagccagac agtaatgcct ccagccaaca aatgcgcctc gaaagtgata
    28381 aacatctggt gcagattgtc acgatccata aatcgaaagg gctggaatat ccgctggtct
    28441 ggttgccatt tattaccaat ttccgcgtcc aggatcaggc gttttatcac gatcgccact
    28501 cgtttgaggc agttttggat cttaatgctg cgccagaaag cgtcgacctc gcggaggccg
    28561 aacgtctggc ggaagatctg cgtttgcttt acgtggcgct gacgcgttcg gtttggcatt
    28621 gcagtctcgg cgttgcaccg ctggtgcgcc gtcgtggcga taaaaaaggt gacaccgacg
    28681 tccaccaaag tgcgctcggg cgtttgctgc aaaaagggga accgcaagat gcggcagggc
    28741 ttcgcacctg tattgaagcg ttatgcgatg atgatattgc ctggcaaacg gcacaaactg
    28801 gtgataacca gccctggcag gttaatgatg ctttaactgc agaactgaat gcgaggacac
    28861 tacaacgatt gcccggcgat aactggcgtg tcaccagcta ctccggcttg cagcagcgtg
    28921 gtcacggtat cgctcaggat ctgatgccac ggctggatgt tgatgccgca ggcgtggtca
    28981 gcgtcgttga agaaccgacg ttaacaccgc atcagttccc gcgcggtgcg tcaccgggga
    29041 cattcttgca cagtttgttt gaagacctcg attttaccca gccggttgac ccgaactggg
    29101 tacaggaaaa actggaactc ggcggctttg aatcgcagtg ggaaccggtg ttgaccgagt
    29161 ggatcacggc tgtcctccag gcacctctca atgaaacggg tgttagcctg agtcagcttt
    29221 ccgaccgcga taaacaggtg gagatggagt tttacctgcc gattagcgaa ccgctcattg
    29281 ccagccagct tgatgcacta attcgccagt ttgactcgct atccgctggc tgcccgccgc
    29341 tggagttcat gcaggtacgt ggcatgttaa aaggctttat cgacctggta ttccgccacg
    29401 aagggcgtta ttacctgctc gactataaat ccaactggct gggtgaagac agttcggctt
    29461 acacccaaca ggctatggca gcagcgatgc aggcacaccg ctatgatctg caatatcagc
    29521 tttataccct ggcgctgcat cgttatctgc gccatcgcat tgctgattac gactatgatc
    29581 gtcactttgg cggcgttatc tatctgttcc tgcgtggcgt tgataaagaa catccgcaac
    29641 aagggattta cacaacccga cccaacgccg ggttgattgc cctgatggat gagatgtttg
    29701 ccggtatgac cctggaggag gcgtaatgaa attgcaaaag caattactgg aagctgtgga
    29761 gcacaaacag ctacgcccgc tggatgtgca atttgccctg accgtggcgg gagatgaaca
    29821 tcctgccgtc accctcgcgg cggcactgtt aagtcatgat gccggagagg gacacgtctg
    29881 tttgccgctt tcacgactgg aaaataacga ggcgtcgcat ccgctgttgg cgacctgtgt
    29941 cagtgaaatc ggtgagctac aaaattggga agaatgcttg ctggcttctc aagcggtcag
    30001 caggggagat gaacccacgc cgatgatcct ctgtggcgat cgtctttatt tgaatcgcat
    30061 gtggtgtaac gagcggacgg tagcgcgctt cttcaatgag gtgaatcatg ccattgaggt
    30121 tgatgaagct ctactggcgc aaaccctgga caagcttttt ccagtaagcg atgaaattaa
    30181 ctggcaaaaa gttgcagcgg cagtggcgct aacgcggcgg atctcggtga tttccggcgg
    30241 cccaggcacc ggtaaaacga ccaccgtggc gaagttgctg gcagcgttaa ttcaaatggc
    30301 cgacggcgaa cgctgccgta tccgtctggc tgcaccaacg ggtaaagctg ccgcgcgctt
    30361 aaccgaatct ctcggcaagg ctttgcgaca gttaccgctg accgatgaac aaaagaaacg
    30421 cattccggaa gatgccagca ctttgcaccg attgctgggc gcgcagccgg gtagccagcg
    30481 tttacgtcat catgccggta acccgctgca tcttgatgtg ctggtggtag atgaagcgtc
    30541 aatgatcgat ctgcctatga tgtcgagact gatcgacgcc ttgccagatc atgcgcgagt
    30601 gatctttctc ggcgatcgtg atcaactggc ctcggttgag gctggggctg tgctgggcga
    30661 tatctgcgct tatgccaacg cgggctttac cgccgagcgt gccaggcagc taagccgcct
    30721 gacggggact cacgttccgg caggaaccgg cacagaagcg gcatctttgc gcgacagtct
    30781 ctgcctgctg caaaaaagct atcgtttcgg cagcgattct ggcattggtc agttagctgc
    30841 ggcgatcaac cgtggtgata aaacggcagt gaaaaccgtt tttcagcagg attttactga
    30901 tatcgaaaaa cgacttttac agagcggcga agattatatt gcgatgcttg aggaagtcct
    30961 tgcgggttac ggacgttatc tggatctgct gcaagcgcgt gccgagccgg atttaatcat
    31021 tcaggcgttc aatgagtacc agcttttgtg cgccctgcgg gaagggccgt ttggcgtggc
    31081 tggactgaat gagcgaattg agcagtttat gcaacagaag cgcaaaattc atcgtcatcc
    31141 gcactctcgt tggtacgaag gccgaccggt gatgattgcc cgtaatgaca gcgcgcttgg
    31201 gttgtttaat ggcgatatcg gtattgcgct ggatcgcggg caggggacgc gcgtctggtt
    31261 tgcgatgccg gacggcaata ttaagtctgt gcaaccgagt cgcttgccag agcacgaaac
    31321 tacgtgggcg atgacggtac ataaatcgca gggatcggag ttcgaccatg cggcgttgat
    31381 tttaccgagc caacgcacgc cggtagtaac gcgagagctg gtatacaccg cggtgacccg
    31441 cgcgcgtcgc cgtctgtcgc tgtatgccga tgagcgtata ttaagtgcgg caatcgccac
    31501 tcgtactgag cggcgcagtg gtctggcggc gttgtttagt tcgcgggaat aaacgtaatt
    31561 gccggatgcg acgcacgagt gttacgcctg ccgcatccgg cgattttcat cgcttaccct
    31621 aaatccgcca tcaacacttt ggatttacgc tggtagttgt acaactgctt tttgctctcg
    31681 ggcagtaaat caatatccac cggggtaaat ccacgttcct ggaaccagtg aatactgcgc
    31741 gtggtcagca caaacaattt gcttaagccg ctctgcttcg cctgagcggc aatgcgttcc
    31801 agcagaacct cgccccgtga tgaactgcgg taatccgggt gaactgccac acaggccatt
    31861 tccccaatat tctcttccgg gaacggatag agcgcggcgc aggcaatagt cgtgttatcg
    31921 cgctgaataa tggtgaattt gtcgatttcc atctccagct gctcgcgaga acggcgcacc
    31981 agaatacctt gctgctccag cgggcgaatc aactccagaa taccgccaat atcgttgatt
    32041 gttgcgcgac gaatctgctc ggcgctttcc atcacaatct gcgtaccgat accgtcgcgt
    32101 gagaacaact cttgcaacag cgcgccatct tcctgataac tgattaaatg acagcggcgc
    32161 acgccgctgc ggcaggcttt cactgcgcca cgcaaaaagc gcaccgtacc ggagttgtaa
    32221 tcgcctttct cttcctgggc ttctacccgt gcttgcgctt cgttagggaa aagttcggag
    32281 acaatatcac cgtcgtcatt agtaacgcct tgggaagagc aaaaaccaat catcttttca
    32341 gctttcagtt tgatggctag ttgagtggca atctcttccg aggtcagatt aaagctctcg
    32401 ccagtgactg aaacagcgac cggccccatt agcactattg caccgctttc cagttgacga
    32461 tggatcgcgt cttcatcaat ccgccggata cgcccgctat ggcagtaatc cacgccgtca
    32521 tcgacgccca gcggctgggc aataataaaa ttgccactaa cgacgttgat atgcgcgccc
    32581 tgcagcggcg tgttattgag actcatcgac aggcgagcag taatatccag ttgcaatgtt
    32641 cccgcagcct gcttcaccag ttccagtgtt ttggcgtcgg tcacacgtat attcttgtga
    32701 tacagcggtt cgtggtgatg cgcagccaga tttgcgtcga tctgcggacg tgcgccatag
    32761 accaccacca gacggatgcc gaggctgtgc aacaacccga tatcattaac gatactggag
    32821 aaattctcat gctcaatggc ttcaccgccg agcatgatga caaacgtttt tccccggtgg
    32881 gtattgatat agggaaccga atggcggaat ccctcgacca gctcggtttt acgttccttt
    32941 accacggcac acctctttgc atgattattc gaaattattg tatttttatt ctgttttttc
    33001 gcagggtgca agtgtaaatt ttatgcgaga gcgacttttt tatcagtaat gccgtgaata
    33061 taaaaagaat gtttaccgtt tattagatga cagattatgc gtctttcgct aaagtttccg
    33121 gtcaaattag tcgtttactt gttacacagc ttagatttct tttgctcggg agaggcatgt
    33181 caggatccaa cactgcaatc agccgtcgtc gtttactgca aggcgcgggc gctatgtggc
    33241 tattgagcgt aagtcaggtc agcctggctg cggttagcca ggtcgtggcg gtgcgcgtct
    33301 ggcctgcgtc cagctacacc cgcgtgacgg tagaatcaaa tcgtcagctg aaatataagc
    33361 agttcgcgtt gagtaaccct gaacgcgtgg tggtggatat cgaagatgta aacctgaact
    33421 cggtactcaa ggggatggcg gcacaaattc gtgcagacga cccgttcatc aagtcggcgc
    33481 gcgtcgggca atttgacccg caaaccgtac gcatggtttt tgaattaaag caaaacgtaa
    33541 aaccgcagct gtttgccctt gcgccggtcg ccgggtttaa agagcgtctg gtgatggacc
    33601 tctatccggc caatgcacag gatatgcagg acccgctgct ggcgctgctg gaggattaca
    33661 acaaaggcga cctcgaaaag caggtgccgc cagcgcaaag tggtccacaa ccgggtaaag
    33721 cagggcgcga tcgtccgatt gtcattatgc ttgaccctgg ccacggtggc gaagactccg
    33781 gtgcggtggg gaaatacaaa acgcgcgaaa aagatgtggt attgcaaata gctcgccgtt
    33841 tgcgctctct gatcgagaaa gagggcaata tgaaggtgta catgacgcgc aatgaagaca
    33901 tcttcattcc gttgcaagtg cgcgtagcaa aagcccagaa acagcgtgct gacctgtttg
    33961 tctctatcca tgccgacgcc tttaccagtc gtcagccgag cggttcctcg gtgtttgcgc
    34021 tctcaaccaa aggcgcaacc agtactgcgg caaaatatct ggcacaaacc cagaacgcct
    34081 cggacttgat tggtggcgtg agcaaaagcg gtgaccgcta tgtcgaccac accatgttcg
    34141 atatggtgca gtcgctgact attgctgaca gccttaagtt tggtaaagcg gtactgaata
    34201 agctcggaaa aatcaacaag ctgcataaaa atcaagttga acaggccggg tttgccgtac
    34261 taaaggcacc agatattccc tccattctgg tcgaaacggc gtttatcagt aacgttgagg
    34321 aagagcgtaa actgaaaacg gcgactttcc agcaggaagt tgcggagtct attcttgcgg
    34381 ggattaaagc gtattttgcc gatggggcaa cgctggcgag aaggggatga taaaaaggcg
    34441 ccgaatggcg ctttttttat gggagaccag aaacaaaaaa acacccgtta gggtgttcaa
    34501 taattggttg cgggggccac agtcaaaagg ttaatctaac cttttgaaac ttaaggcatt
    34561 cactgttccc gaatccaagc tttctaccga attatacact cattatctaa tgtgaatcaa
    34621 cgagtatatt cgaaccaact acactcaagg cgctggttat tcctgattaa aagttagaaa
    34681 agtacgcagt ttgcttgact cactaagagc agtctatcag atgtgccggt tcgcgcatag
    34741 cggctttatt gaaggcattg agagcacatg agcgcctaca tctttagcca gtgatacaat
    34801 ctgctgatag atacgttcag gtcatcggca atatcctgga cttttccccg acgaccttcc
    34861 tgtttttcat tcgccttata gcttctgttt tcaactccac agagacactt tttatgctgg
    34921 gagatctttc ccataccctg tttttaagga tatctcgtcg ggcatattgt ttcttcaata
    34981 tagaaccgga gcgattacgc cagtcaggat ctgactttag ttgccttccc tttattctca
    35041 tcatggcaat ttgtttaact gctccagttg catctgactt gccgcaattg ttctgtcctg
    35101 agccagcagc gccttatcct ttacatccag ctttgccagc tcgccgctct ccagcgactg
    35161 cggtaatggc atgacagaca gttgtattcg ctggattagc gcgtccggct gattaagctg
    35221 cgaccagccc cataatcctg ttccgccgag acaggccatc gcaaccattc cggccataaa
    35281 tatcggccat gcccgttgcc gggagatttc aggggatggc acgggtggac tggcatcctt
    35341 atcgttttgc tgagcgggtc tggttgcaaa aaccggctgt ggactttctt ctgacttttt
    35401 cggttgattc atttcccggc ggggtaattc agggggagtg atagtggttt ccgctccctg
    35461 tggtgccagc cgctccagac gtagcgccgc attacgaaac tgcccggcca gcacatccag
    35521 tttcgtcata tgccacagtt cacactgttg cagtgtggtt tcgatggcag aaagatgctg
    35581 tacacaacgg tagatttgtg gcagatcctg atactgaata tccagcgctc tcagtgcctg
    35641 ctgcattttt tctgtgaccc aactgagcag tgatattctg gaatgtacct gtaccggcca
    35701 gaagtcagcc cagcgctgga gcagtatgtc cagtgaaccg agtccgtctg ccatccctgc
    35761 cagcccctgc cgtctggtta ttgccagtac gtaacagacc agcgtctgta attccacgcc
    35821 attttgccgg aacagcgcga ggctgagttt ttccacctga cgccagtcca catccggtcg
    35881 ggccgggtga gtcagtttac tcatttcagc ctgcagttca ccggattcct tataagtaca
    35941 gggatcgccg cccatgacga actggctgat aaaattcgcg ttacttgcca tcagtacgcc
    36001 cgctcctgct gtttgagatg acgcagaaca attcgtcctt ccggagaaaa cacgccatca
    36061 aagcgtatcc agccggtatc gggaagctgc gcgtggatca ggtaattaag atgccccgga
    36121 cggggctggg ggagtaattc cacctgtatc tgactcaggc gtggttcata acgcagcaac
    36181 gtttcttcaa tctgacgcat caggccatga atacccgcag ccatcccctg atggatcaga
    36241 ctgagatccg gcagaccgta atccggcaaa tgtgccagcg tgcctgcccg acagttgata
    36301 atgcgttgca tattgtccat cacggaaagg ataagctgat cccgctcgct gacctgttcc
    36361 agcggtaact cgccgctgaa actgaacgtc agcatttcat ataaggaagg tgtcgacatc
    36421 ggttatttat ccttgagagg cagcagtcgc aggtcgcttc tcatcagttc aatcgagcgc
    36481 ggcttgtcga cctccagttc gtcccttttg atcaccagac gccagctgtc gcttttttca
    36541 tcagggtgat aaaactgccc aataatggcg acaaactgcg tctctttatc cagcggcaca
    36601 ttcagggatg ctgcaccttc cggttttacc cagacggtgt gttttgccag tacgtccttc
    36661 tccagtgtct tctcttcctg cataaacagg gtgtcataat ccgccttatc aaaatcttcg
    36721 cgggttttca gttgccacac atgcaccatt gtggaaagcg gcgtatcttc cgcatccgta
    36781 ttcagggcgc tgcgggagaa gaaatcgaga tgcagtgttt tgatttgttt gtagaaaacg
    36841 gctgaggcca cgctctttga ttcatccacc actttctgaa tcagcccgca gccactcaga
    36901 acaaccgtca gcatcgccat acagagcagc gccggacgtt taaaacgaat aggaaacatg
    36961 agtcatacac tccctgttac gaatggataa agcgggtatt aatccctgat aacgccccag
    37021 actgaccgtc actgttccgg tcgcgggcgc ggcaaaggag gcgcgaagga tgccggtacg
    37081 gctaatctgt acacgctgtt ttcccagccg ggcagcaggc aacaggctga cgggcagtgt
    37141 cagttgcaga cggcctgaca gcgccagccc agataaacgc gcagcagcac cagcaaatcg
    37201 ctgtgcagtt gcccgccagg cagccagcca cgtgcttctg cggcatcttc ggtatacagt
    37261 ttcagcagca actggctgtt gacgtcggtg ccggtacgcc ccagcagcgt tcgcgttttc
    37321 aggctgatgc gtgaattttt tgacagaccc gcaggggccg ggagaataac aggctgcgga
    37381 tcgtgaggca ccaccgtcgc tttcgtcagc ggggcaagca gtcccaccag tgccgtgacg
    37441 ccttccgccg tgcgcgtcgg caggctcatc acgctgagca gggccagaaa acgggatacc
    37501 ggcgtggcga tatggttctc gctgccggga atacccagcc cgatgagtcc caacagacaa
    37561 cgggaaatgt catccacggc acctgcttca aacgacgccg ggtagttata tttgcgccag
    37621 atgcggtaat actgggtgat aaagcggtgg ttaaaaatat cgagaaacgc catcactgcg
    37681 tcatgtccgt catgacgttg ggtaatgtag tccagatagg cggtgggcag cggcgaatcc
    37741 acgccgtaca ggccgagaaa ggtggtgcgc accgtgggtg gcgcgtcggg attgcacacg
    37801 tcacgttcaa cgttctttaa ctcgctgacc ggaaagccca ttccgggatg gggacgaaag
    37861 cgcaccgcat cggcggcggg gctgtcggta ctgcccagcg gcgcgttctg ctggctctgt
    37921 tccagcaact ggcaaaaacg gtaaaaattg atccgcgcaa tatccggggc cagccggtcg
    37981 gtcagcccgg tacgcgctgg ctgtgatgct ctgtccattg caggcacttt cctgtgggtt
    38041 gcagaattaa ggtcagttga gtgaataagt ggatatcggc atacagtgcg aagaagcggt
    38101 gcagcagttc accaaacagc gtgatatcac cctctccggc aaagccgtta ctgtccagcg
    38161 tcacctgaat atccacgcca cgaagcagaa agcctctttc aaaacgctgt atcaggctgt
    38221 gctgaacgtc gacaatcgcc tccagacgac ggcggttcat ctcgctttcg gtccagtcgt
    38281 acagcgccag tgtgccgcgc agaatttcgg cgttatccat catcgataaa aagttagaac
    38341 caaggtggct gagcacccgc cagtggaagc ggtcacgcgc cgggggatag cagggctgcg
    38401 tcggagcgca caggttgcgc acccacagga cgttctgtga ggcatgaact ggcgtatcga
    38461 gcagcgtgct ctgtaaagct ttacggggaa gctgcccgtt agtaccggtc aggcttaaag
    38521 agagcgtttc atcctccagc atccggtcag catcaaacgc atcaccgccc agaatcagcc
    38581 aggtgtcatg cagaccggaa gggccgcgct ttacccgcgt gtggtaatag cgttccggcg
    38641 catcgtggcg cagcatcccg ccccggtgac gaaagctgga gaaggggaca tacgcctgac
    38701 tgccggtatg gcgcgaagaa ataatgttgt cgacggaata aatctcggta tgcccgtcct
    38761 gaatgcgcat cgggcgcagc aggaactcgt tttccagtgg cgaaaggtgt aacggatcgg
    38821 cttccagcgg gaacaggttg ataaccggca cgcagtgcag acggatatta tcgctgtcaa
    38881 acggcaggtc gtgaggccag ttctcgttca gcaccacgtc aatctcaaag ccggttatcc
    38941 cctccggcca tgcaacctgc tccagcccgt tcaacgccac gaacataaac ttctcgcgga
    39001 aggtgaaata ctccagcagc aactggtagc cgctgaaggc tgactcacct tttggccaga
    39061 gcctgtcatc atcttcaaag cccatcgggg aaaagtgtgc gtcaagcgtc cggcgatcct
    39121 gtcccggcag acgcagccag aactgctgtg tgccaagcgt taatgcccgg tgcagcgcac
    39181 aggccaccgg gctgtcggca ttgagataga gcggcagccg ggataaatcg atctgtgacc
    39241 agtcaccaac cagcgggccg cattcaaagc gcaggcgaat gactgagcgt ccgtccggtt
    39301 catattgcaa tgacacgtcc ggcaacgcca gcggatgcag cgtgatatcc cgcgtggcgc
    39361 tgtagaaaca gcgtgttctg cgctcgccaa caggacgcga caatacctga aaatcgctca
    39421 gcgtttcgct ctgcttcatc tgccggtgat ctgtcgacag ttcaaccacg gaaagtgacg
    39481 ggatggttcg caggtagtga ggccacagca ggctgaccag cccttcagtc agttccggca
    39541 gatcgtcgtc cagcttttca cgcaggcggc ccattaaaaa agcgaagcct tcgaacaggc
    39601 gttccacata gggatcgcgc gcgccgggtt tatcaaggtt aagcatcgcg gcgcggtcgg
    39661 ggtaagcctg cgcaaattct ttccccgcct cacgcaggta gcgcatttcg gcttcgtagt
    39721 agcgttgggt taagtcgtcc attcagaccc tgtgatttaa ttaacgaata ataaacgtgt
    39781 ttttcagttt taataatgaa ataaattgat atcagtaagt cgggaatttt agacacacca
    39841 tattaaaata tatggttgaa gcgtgacgcc atttttctgt cacgctgaat atttagcatt
    39901 ttattttcag taaattaaac gcttacatga tgttcggttc gcgtctaata tattcaattg
    39961 ggatgaaatt aagttaaaat attaccagcg caattctgat gtcggcatat atgtaatact
    40021 cttaactaac tcatcagagt cataggctac tctcattgta accggaatat gaaaaccatc
    40081 aatcgaaaac cgttcaaccc atccaaacat cgtagttcct atcatccgag gaggaatgga
    40141 tttgtctggc aagccaaatg tttcatgtac ccacttgcgt gacattttac tttgcagtgg
    40201 taaaggtaat tcattaggga aaatccagtt ttctaccttg tcatgttgaa tataaagggt
    40261 catttcgttg aagattttcc catcacgcct gaatgataaa aataaccctt cttttgccat
    40321 ctccaggttg agatttgggg agcctgcata acctttaggt tctgttttgt aagtaatgac
    40381 accattatca attagttcgg ggtggctttt ttctaagcta taaattaacg cttcaatatt
    40441 cacggtcatt tatataatcc ctgttctgag tttaacttgt gtattctcgc tctggcatct
    40501 ttcagttgtt cttctgatgc tccttgatct tttaattttg gctctaatgc gtcaaaatta
    40561 cgatcgacta cagctctaag gttcctggca tgtttggcaa gattatcagc attattacgc
    40621 ccgtcaaaag tctctgggtg ttacttcttt attggtttat ttattgccgt ttctttcaca
    40681 taatgatttt tctttaacgt atttcgttgc cagacccggc atccacccag acggatacca
    40741 ttacaagcaa tataatttct agataataat tcttttttgt aaattgaaga gaaaatcaac
    40801 attgcgcaaa tagagaaagc aataataatc ttaattatta accaaaggcg caccattgtt
    40861 actttagata atcgtcgccc actaatagaa aaaaacaaaa tctcaaacga cattacatat
    40921 aatgtaaaag gtaaaaagat aattaatata tacccccagc tatatacaat aatatcattc
    40981 cataaaaata gttcataagt agcataacag ccaaaaaaaa caaaagttgt ggataaaaaa
    41041 tataaatatg gctccgcaag ttaactttag cttttctttt aatgcattta tagtcatatc
    41101 tatttcaatt cccatttact cacattattt agtttatctt ttaaatactc cttcacttca
    41161 tgttccagta cttccttccc tttaataagc atgtgttttg cccacatagc tcccagatcc
    41221 cttcttcaat ctctctggct ttcttaatat tattttatta tttacttgat cactaacttc
    41281 cctgagcatc taataaataa aacaaagtaa gaaaaataat accatcccat tagcaatgtg
    41341 tttgatatta acgcaagcac ctctagatta ttataagcat ctacacccct gaatattata
    41401 tctgtcaata ataaagcaat gaatgataat agaccacctg tacaacaccc aaagaacaaa
    41461 gaataaaaaa catttaattt ataaaaaata tcagtaacaa ataaaataaa aaaggaaaat
    41521 gaaaggtata aaattaggta agaataccag taaaaatcat gaagttgatg tttggcgtca
    41581 actttataaa caagataaac attaacaaat aatgatatga taaaaaataa aagtaatact
    41641 acaaatctaa atatttcatt tattctcgcc atttaacttt attctttttt ctttttcttt
    41701 aacaaccgct tcccatagtg aatttggcag cgtataaata tcaagttctg ggattatata
    41761 ttttaacaat tttgaagacc attcggcaca actaaaactc cccggttctt catcgccatc
    41821 atctaatgcc aatgcagcat tctttatcgt taataactcg tcattcgtta ccggtaaaga
    41881 taataacttt accttatagg gaaaccattc gctatccagc ttattctgcg ttacttcatt
    41941 cggattttct tgataactga taaaatcatc cagttttgca aattcaccac taaatacaaa
    42001 accggatcct ctctgcccat tttcattttc taatttttta taaggattat agcttccatt
    42061 aggatcataa agataagggc ttgatgaatc accagacact tcaaaataaa tagctgaatg
    42121 atctcccatt acctcggcat tagtactata tactctaatt gtggatgtaa ttaaaattat
    42181 ttctgatgta tattttgttt ttttctgagt gttatctcct cgaacatccg tccattcttt
    42241 atttaaccta ttctgatcta ttcctgctat ctggttatct gttcctgaac cttcttcggt
    42301 ctcatacgta tcatccatca ttgacgcaat aaatcgcgcc ttacacgggc aactgctctg
    42361 gctgtccagc gtccccgcca tcagcctgcc gtgaatatct gtttcaggaa cgccgcccac
    42421 aataataaac attcccggat atctgccgca ggtgacccgg tccatatccc gtgcctgtgg
    42481 gatacccatg atcgtatggt cgtccgcgcc ttcaataatc ttcccgccgc aggtggtctt
    42541 atcgcccctg accagaaaat agcctcttcc catcgtcatc actccttatg ctgcgtatca
    42601 cacagtaccg ctgcccgtac cggatcgatt gttaccagcg ttcccagcag gatttccatt
    42661 tttcggttca gcagggcttt atcagcatag cggtgcgccc gcaggcgcag cagtttcagc
    42721 tgtcgggctt ttacctcaaa ctcgcctgtg tgctggtcca gctcagcgat gcgccgggtt
    42781 gccactgttc atccggccag ttaaaacgct gccagcgttc cttctggttg aaatactcca
    42841 gttcctgccc gtcaatcacc agatgtgttt tcatcacgtc tcgggccggt tttgcccgca
    42901 gttcaaaatg tattccggca tcgccgctgg caaaggcggt gtcggccaca tcgcgcaggc
    42961 ggttcagggc gcggataaag tccgggttga ccgtcagccc ctgcgtgttc atggcgtcag
    43021 ccacccagta gcggccttca cgtttcagta cgccggaaag gttggcggca ataaactggt
    43081 tgatgcgccc gtcatcgcgc agatactgcg ccagcagggg aagagaggca tcgttttgtg
    43141 aggctttgaa cgggtagcga ccggcgaagt cctgattcca gtggctgaca atcgcccgct
    43201 gccactggcg gttcaggctg tccgccgcag gcgtcagcac ctgccgccac gactgctcca
    43261 ccgggcggac gaacagcgcc tgaccgaagc cactccattc ctcgcccaga ctggcggcga
    43321 ttaaccgtcc gtagtcgcgg gtgtcggtga ggtcaacggt tttgccctgt aaaaccgtct
    43381 gcgccagttg ctgggtcatc tcctgtgggt cgggggcgtt ggtcacctgt tgcagtttga
    43441 ggcgtacgcg ggtgacgcgg gtcagatacg tttgcaggct gagttgcgta tcaccaccac
    43501 tgcctccggc cttatcgccc agcaaccgca gcagcggcgc gaaggtttta tccagcggcc
    43561 cgacaggcac gtcgccttca cgggattgct gtggcgtttt ctccttgccg ttaaacagtt
    43621 cctgtgccga tttcgccagc gagtctgaca gaccacggtt ttccctgcca gccgccgcct
    43681 gccacgcgag ggtgtccgtc agcgcaatca gtggcgactg acgggcatcg gccatcagtg
    43741 tcagctggtc gagaatgccg gagagcgagt cttccttttt ccagcgaatg ctgttgagaa
    43801 acgccagcca gcttccggca aagtcggtaa agtagcgtga ggtgagacgg ttacgcagcg
    43861 tatccggcga gatatccgca gaggtatcct gctggcggtc gctgagtacc cagtctattt
    43921 cctcgcgccg cgccgtcacc acctgctcga tggcttccct gacctgtcct tcccacgcct
    43981 gacgggtgaa catccccggc accgtctgtt ccgtactgaa aagagattcg gtgagggtat
    44041 ccccggtcat gtccgccagc gtcatatcgg cgtagttgcg ggacacctgt tgcagtacgt
    44101 tctggtagag agtgttttcg gcattacgca caccaatctg gcgcagcagg attttacgca
    44161 ccgcgccggt cagttccggt ggcggcgagg ttttccactg caggtgttcc ggcaggttcg
    44221 ccatccagaa ggtcagcagc gagggcaaca cgctctgacg cacaccttcc gggatatttt
    44281 catagcgcag gccgtccgcc atcagcgtgg tactgaaaaa ggcagcgtcg gccttttccg
    44341 ggcgggaagt catcagcaat gccttaagct gcttatagcg ttgttcaccg gtggcggtac
    44401 gctgaggact gttgggcggc agtgcgacaa aggcgttcag ttgctgttgc agatggtcaa
    44461 cggccacgtc gcgcaccagc cggtttgccg cctttgcata gccgggaaag gcggcggcga
    44521 gcagttgttg gttacgttca agaccaaaac gctgatacca cggcgcacct tcgcggatac
    44581 gatattgcag gcgctccagt tcgccctgca gggtatgcag cgccaccagt tgttctgcca
    44641 gcggcaggcg ggtatcaagc gcacgtgccg tctggatacc ggtttcctga acaagagcgc
    44701 ggttggcgaa gaacgaggtc gtcattccgg ccccccatat tgccagcacg cagacagcgg
    44761 acatcagcgc ggcgcgtagc cacggaaagc ccactgtacg cccccgtgcg ttatcgccgg
    44821 tcacgcccgc ccagaccggt gacggcagcc acgcatgagg tgcggcctcc ggcacggcgg
    44881 taagcggcgg gctgaacatc aggccgcgca ggcgcaggga agagaatgcg ccgcctgcca
    44941 gcagcggttt cagaacgctt tgccagtgag cgataccccg ctctgcaagg gtatgggcca
    45001 gacgcagcag aaaatcatgg cggttatcgg tcagtagctg cgacatgccc tgttccgtca
    45061 gcggcagggt ttgtgcttcc agcattgcag ccagttgttc cggggtacag ccttccggca
    45121 gcaggcagcc gacgctttgc aggacgcgcc cggactgata atcaccgttg tcacagacct
    45181 gccacaaata gagtggggcc tgaaaaccga gtcgcttacc gccgtttatc agttcgcgcc
    45241 agcctttgtc gagttgcact gtctggcggc tttgttcttc tgtcagcggc cagatgatgc
    45301 cgtccagcgg acggctgcgg cgcagttttt ttaaggcggt cagcagtgtg acatcaggct
    45361 ccgctgatgg cctgccgcca tatatcagta ctgtgtggtc gccctccagc cagtgttgcc
    45421 cggtcagccc cggcgcaata gcctctgcct gttcaggctc gccggtcacc agcagcagac
    45481 ggattttacg ccgccagaac gggccgtagc ggtcgcgcag gaaggcggcg agttccacca
    45541 ttgccggatg acggctgtcg gctttctttg tcgtcaccgc acgatagtca tctccggcgg
    45601 caagttgtct gcggagttca aagttctgta cggcagcgtg gcggttcagc agatgataaa
    45661 cccccatgat aatcagaaag accacgcctg cggcaatcac gccagccatc cagtacattt
    45721 gctgtgagct acccggttca acgcccagca atgcctgttt acggtgaata aacgtgcaaa
    45781 gcgcaaccac aacagccacg gtcatgacga tggcaggccc tgaaacagaa cggggccgga
    45841 gacggtttaa tcccggaacc actatgatgc ctcctgtggg gaaacgaatg gcgacaccac
    45901 ggtcgcccat gaataatgcc cgccctgaac gccgctgagc gtcagttggg ggtgttgtga
    45961 ttgtattgcc gccagcgttg ccgcagcgac ggacagccat ggcgcagccg gtccggagcg
    46021 ccccagaaag gcatccagct cgtacatcag ggcttcctga gcaaacggct ggttcaggct
    46081 taacaacgcg gcacgttgtt ccctgtccag ttcggcagtc catatgccgg atatggcata
    46141 tggctgcacc ggcatccagt ccagcgcctg tgcaatgcct gacgccatca tctctgtatc
    46201 tgtgatacgt tcaggacgat gcagcagggc cagcggcgta agcgcggttt gcgtcagtcg
    46261 gtttgccagc aacagcgcgg tggcggattc tgccgtccgt tccgggttct tcggttcaag
    46321 tcgtacggaa atcaccagca gtacggcctt ttcctgaata aagttgtcca gccagccgtc
    46381 cacggcggcc agccccggct ccggggcaga aaacagacgg gcttccggga gtccggcttt
    46441 ttgccattcg tcctgccaga tagttcttaa agcgcgcaaa attattcaag atagatatgg
    46501 aattctttca agataagcca gaagcgcgca tatggaagtt attcaagata aaacagcggc
    46561 attaa
//
LOCUS       DAJVTL010000017        45314 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.017, whole genome shotgun sequence.
ACCESSION   DAJVTL010000017 DAJVTL010000000
VERSION     DAJVTL010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 45314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45314
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.017"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..1720)
                     /locus_tag="OQQ26_000912"
                     /pseudo
     CDS             complement(1..1720)
                     /locus_tag="OQQ26_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313269.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(1810..1894)
                     /locus_tag="OQQ26_000913"
     tRNA            complement(1810..1894)
                     /locus_tag="OQQ26_000913"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1858..1860),aa:Leu,seq:caa)
     gene            2090..3109
                     /gene="ahr"
                     /locus_tag="OQQ26_000914"
     CDS             2090..3109
                     /gene="ahr"
                     /locus_tag="OQQ26_000914"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent aldehyde reductase Ahr"
                     /protein_id="HCS1856460.1"
                     /translation="MSMIKSYAAKEAGGELEVYEYDPGELKPQDIEVQVDYCGICHSD
                     LSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDAC
                     ISGNQINCEQGAMPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
                     LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVN
                     SRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLI
                     AGDRSISGSATGTPYELRKLMRFAARIKVAPTTELFPMSKINDAIKHVRDGKARYRVV
                     LKADF"
     gene            3239..4741
                     /locus_tag="OQQ26_000915"
     CDS             3239..4741
                     /locus_tag="OQQ26_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HCS1856461.1"
                     /translation="MSEPRLIARTPDTELFLLPAMANRHGLITGATGTGKTVTLQKLA
                     ESLSEIGVPVFMADVKGDLTGVAAEGTTSEKLLARLKNIGVNDWQPHANPVVVWDIFG
                     EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
                     IGDNAKSFQNQYGNISSASVGAIQRGLWSLEQQGAAHFFGEPMLDIKDWMRTDANGKG
                     VINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
                     QVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAV
                     KAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTE
                     DERNGLINHSPVYGKYEDDVDRESAYEMLQKGVQASTEQQNNPAVKGKEVAVDDGILG
                     GLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR"
     gene            complement(4860..5942)
                     /gene="lptG"
                     /locus_tag="OQQ26_000916"
     CDS             complement(4860..5942)
                     /gene="lptG"
                     /locus_tag="OQQ26_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313266.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HCS1856462.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIIGALLPSASFFLISLWLLMRKS"
     gene            complement(5942..7042)
                     /gene="lptF"
                     /locus_tag="OQQ26_000917"
     CDS             complement(5942..7042)
                     /gene="lptF"
                     /locus_tag="OQQ26_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HCS1856463.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAL
                     LRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTV
                     FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV
                     NLIYLALAIVLNLWDTVPVRRLRASFSRKGAV"
     gene            7309..8820
                     /gene="pepA"
                     /locus_tag="OQQ26_000918"
     CDS             7309..8820
                     /gene="pepA"
                     /locus_tag="OQQ26_000918"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HCS1856464.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMESVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE"
     gene            9174..9617
                     /gene="holC"
                     /locus_tag="OQQ26_000919"
     CDS             9174..9617
                     /gene="holC"
                     /locus_tag="OQQ26_000919"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HCS1856465.1"
                     /translation="MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACE
                     DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK"
     gene            9617..12472
                     /gene="valS"
                     /locus_tag="OQQ26_000920"
     CDS             9617..12472
                     /gene="valS"
                     /locus_tag="OQQ26_000920"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HCS1856466.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQK
                     LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRN
                     EEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFN
                     QTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVL
                     PADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEG
                     FVAHAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL"
     gene            complement(12528..13724)
                     /locus_tag="OQQ26_000921"
     CDS             complement(12528..13724)
                     /locus_tag="OQQ26_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 domain-containing protein"
                     /protein_id="HCS1856467.1"
                     /translation="MVQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLP
                     WALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCV
                     LTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTV
                     FFISTKMLHANSSSSVIVSVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFK
                     VKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDTENLQQFMEMQ
                     RKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYLMCAL
                     VVRSGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLARISRGIM
                     PSLPFL"
     gene            13917..14420
                     /locus_tag="OQQ26_000922"
     CDS             13917..14420
                     /locus_tag="OQQ26_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1856468.1"
                     /translation="MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVA
                     DPNLDELYQVYSQPGHAYWVVEFDGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGK
                     GLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGYTGHVDCE
                     VRMLREL"
     gene            complement(14466..14882)
                     /gene="rraB"
                     /locus_tag="OQQ26_000923"
     CDS             complement(14466..14882)
                     /gene="rraB"
                     /locus_tag="OQQ26_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HCS1856469.1"
                     /translation="MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLE
                     TLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAE
                     KFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH"
     gene            15044..16048
                     /gene="argF"
                     /locus_tag="OQQ26_000924"
     CDS             15044..16048
                     /gene="argF"
                     /locus_tag="OQQ26_000924"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HCS1856470.1"
                     /translation="MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSSKEEAKLT
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD
                     GIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED
                     VAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLP
                     AFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
                     "
     gene            complement(16127..16444)
                     /locus_tag="OQQ26_000925"
     CDS             complement(16127..16444)
                     /locus_tag="OQQ26_000925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856471.1"
                     /translation="MKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVKK
                     HPGYVVKIFEEKMGNELKIRTRMMKILRNGKINIYEYINNEQLGKLNPPEDLRIVIEK
                     FGW"
     gene            complement(16883..17774)
                     /locus_tag="OQQ26_000926"
                     /pseudo
     CDS             complement(16883..17774)
                     /locus_tag="OQQ26_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409190.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
     gene            complement(17897..18349)
                     /gene="tabA"
                     /locus_tag="OQQ26_000927"
     CDS             complement(17897..18349)
                     /gene="tabA"
                     /locus_tag="OQQ26_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin biofilm protein TabA"
                     /protein_id="HCS1856472.1"
                     /translation="MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRL
                     FYLISEDMTEPYEARRAEYHARYLDIQIVLRGQEGMTFSTQPAGTPDTDWLADKDIAF
                     LPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA"
     gene            complement(18494..19087)
                     /locus_tag="OQQ26_000928"
     CDS             complement(18494..19087)
                     /locus_tag="OQQ26_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HCS1856473.1"
                     /translation="MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTD
                     YLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAAR
                     RYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAKCVTDFM
                     STVMSGLSAKAREGHSIEQLCATAALAGEAIKTILEE"
     gene            19158..19871
                     /gene="bdcA"
                     /locus_tag="OQQ26_000929"
     CDS             19158..19871
                     /gene="bdcA"
                     /locus_tag="OQQ26_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1856474.1"
                     /translation="MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA
                     ERLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRL
                     FKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMLVAGMAAYAASKSALQGMARGL
                     ARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAG
                     PEASFVTGAMHTIDGAFGA"
     gene            20002..20397
                     /locus_tag="OQQ26_000930"
     CDS             20002..20397
                     /locus_tag="OQQ26_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HCS1856475.1"
                     /translation="MVERTAVFPASRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGT
                     PEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAP
                     PYPNWTAVGVTWLAGFDFEIKVIARIPEQ"
     gene            20678..20812
                     /gene="pyrL"
                     /locus_tag="OQQ26_000931"
     CDS             20678..20812
                     /gene="pyrL"
                     /locus_tag="OQQ26_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HCS1856476.1"
                     /translation="MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
                     "
     gene            20816..21751
                     /gene="pyrB"
                     /locus_tag="OQQ26_000932"
     CDS             20816..21751
                     /gene="pyrB"
                     /locus_tag="OQQ26_000932"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HCS1856477.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAM
                     VGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEE
                     VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT
                     DVDKTPHAWFFQQAGNGIFARQALLALVLNRDLVL"
     gene            21764..22225
                     /gene="pyrI"
                     /locus_tag="OQQ26_000933"
     CDS             21764..22225
                     /gene="pyrI"
                     /locus_tag="OQQ26_000933"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HCS1856478.1"
                     /translation="MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPER
                     IDNVLVCPNSNCISHAEPVSSSFTVRKRANDIALKCKYCEKEFSHNVVLAN"
     gene            22298..22684
                     /gene="ridA"
                     /locus_tag="OQQ26_000934"
     CDS             22298..22684
                     /gene="ridA"
                     /locus_tag="OQQ26_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HCS1856479.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA
                     DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAVRR"
     gene            complement(23251..25947)
                     /gene="mgtA"
                     /locus_tag="OQQ26_000935"
     CDS             complement(23251..25947)
                     /gene="mgtA"
                     /locus_tag="OQQ26_000935"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HCS1856480.1"
                     /translation="MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTAVPPSLSAHCLK
                     MAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQPSPWWVHLWVCYRNPFN
                     ILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL
                     RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLP
                     VEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQES
                     EPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLP
                     MIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS
                     GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR
                     RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDTMLRKIKRVTDTLNRQ
                     GVRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK
                     ILTGDSELVVAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKER
                     IVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLE
                     EGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVS
                     QVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET
                     QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPL
                     ASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(26088..26141)
                     /gene="mgtL"
                     /locus_tag="OQQ26_000936"
     CDS             complement(26088..26141)
                     /gene="mgtL"
                     /locus_tag="OQQ26_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_003933616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HCS1856481.1"
                     /translation="MEPDPTPLPRRRLKLFR"
     gene            26326..27273
                     /gene="treR"
                     /locus_tag="OQQ26_000937"
     CDS             26326..27273
                     /gene="treR"
                     /locus_tag="OQQ26_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HCS1856482.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQF
                     SPQLVAEHLRVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDE
                     GAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAM
                     KQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPE
                     IVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIISATLS"
     gene            27392..28813
                     /gene="treB"
                     /locus_tag="OQQ26_000938"
     CDS             27392..28813
                     /gene="treB"
                     /locus_tag="OQQ26_000938"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HCS1856483.1"
                     /translation="MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANAR
                     PKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMK
                     WHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFL
                     WLIGEVIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDF
                     GMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHA
                     LIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQ
                     SMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGIN
                     LKYRFPMLCAMIGSDLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMAIAI
                     IIPIVLTSFIYQRKYRLGTLDIV"
     gene            28863..30518
                     /gene="treC"
                     /locus_tag="OQQ26_000939"
     CDS             28863..30518
                     /gene="treC"
                     /locus_tag="OQQ26_000939"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HCS1856484.1"
                     /translation="MTNLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLRK
                     LGVDAIWLTPFYISPQVDNGYDVANYTAIAPIYGTLDDFDELVTQAKSRGIRIILDIV
                     FNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWHWHAESEQYY
                     LHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKDPRFPEDLDGD
                     GRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFN
                     FHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFG
                     DEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELR
                     NDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTDGEPWIGLGDNYQQINVEAALA
                     DESSVFYTYQKLIALRKQEAVLTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSRE
                     IQPWQPEQMRGNWQLVMHNYEEASPQPCAMTLRPFEAVWWLQK"
     gene            30912..33050
                     /gene="nrdD"
                     /locus_tag="OQQ26_000940"
     CDS             30912..33050
                     /gene="nrdD"
                     /locus_tag="OQQ26_000940"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HCS1856485.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA
                     VVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI
                     RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI
                     RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDEAAFWKLLDERLVLARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY
                     DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            33208..33672
                     /gene="nrdG"
                     /locus_tag="OQQ26_000941"
     CDS             33208..33672
                     /gene="nrdG"
                     /locus_tag="OQQ26_000941"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HCS1856486.1"
                     /translation="MNYHQYYPVDIVNGPGTRCTLFVSGCVHECSGCYNKSTWRVNSG
                     QPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIW
                     VWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR"
     gene            complement(33717..34103)
                     /gene="cybC"
                     /locus_tag="OQQ26_000942"
     CDS             complement(33717..34103)
                     /gene="cybC"
                     /locus_tag="OQQ26_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313240.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HCS1856487.1"
                     /translation="MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADN
                     AAQVKDALTKMRAAALDAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLAN
                     EGKVKEAQAAAEQLKTTRNSYHKKYR"
     gene            complement(34286..35638)
                     /gene="pmbA"
                     /locus_tag="OQQ26_000943"
     CDS             complement(34286..35638)
                     /gene="pmbA"
                     /locus_tag="OQQ26_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HCS1856488.1"
                     /translation="MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEG
                     GSFNSHYGVKVFGNSHGMLQGYCSTRHSLSNCVIAEENGDMERDYAYTIGRAMSDLQT
                     PEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFL
                     LDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            35732..36283
                     /locus_tag="OQQ26_000944"
     CDS             35732..36283
                     /locus_tag="OQQ26_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HCS1856489.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     EIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAEHEG"
     gene            complement(36434..37807)
                     /gene="mpl"
                     /locus_tag="OQQ26_000945"
     CDS             complement(36434..37807)
                     /gene="mpl"
                     /locus_tag="OQQ26_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HCS1856490.1"
                     /translation="MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEK
                     QGIELIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLV
                     GEHNMHNGLMAIAAARHVGVAPADAANALGSFINARRRLELRGEANGVTVYDDFAHHP
                     TAILATLAALRGKVGGTARIIAVLEPRSNTMKMGLCKDDLAPSLGRADEVFLLQPAHI
                     PWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA
                     KKAEAAQ"
     gene            37972..38970
                     /gene="fbp"
                     /locus_tag="OQQ26_000946"
     CDS             37972..38970
                     /gene="fbp"
                     /locus_tag="OQQ26_000946"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HCS1856491.1"
                     /translation="MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA"
     gene            complement(39003..39998)
                     /gene="yjfF"
                     /locus_tag="OQQ26_000947"
     CDS             complement(39003..39998)
                     /gene="yjfF"
                     /locus_tag="OQQ26_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease YjfF"
                     /protein_id="HCS1856492.1"
                     /translation="MIKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAF
                     LGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFG
                     AFMGLLIDAMKIPAFIITLAGMFFLRGVSYLISEESIPINHPIYDTLSSLAWKIPGGG
                     RLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLST
                     GLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQG
                     LIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQR"
     gene            complement(39985..41007)
                     /locus_tag="OQQ26_000948"
     CDS             complement(39985..41007)
                     /locus_tag="OQQ26_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1856493.1"
                     /translation="MPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQV
                     VLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVA
                     GVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
                     FNSPDLSWFGSGSLLFLPTSVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAG
                     VNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMG
                     GRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGV
                     RSRDKT"
     gene            complement(41021..42523)
                     /locus_tag="OQQ26_000949"
                     /pseudo
     CDS             complement(41021..42523)
                     /locus_tag="OQQ26_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026286.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
     gene            complement(42664..43620)
                     /gene="ytfQ"
                     /locus_tag="OQQ26_000950"
     CDS             complement(42664..43620)
                     /gene="ytfQ"
                     /locus_tag="OQQ26_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactofuranose ABC transporter
                     substrate-binding protein YtfQ"
                     /protein_id="HCS1856494.1"
                     /translation="MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNV
                     AKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
                     AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
                     ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYA
                     HNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMIDGEVNASVELTPNMAGPA
                     FDALEKYKKDGTMPEKLTLTKSPLYLPDTAKEELEKKKNMGY"
     gene            43930..44460
                     /gene="ppa"
                     /locus_tag="OQQ26_000951"
     CDS             43930..44460
                     /gene="ppa"
                     /locus_tag="OQQ26_000951"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HCS1856495.1"
                     /translation="MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
                     DAKLIAVPHTKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAE
                     AAKAEIVASFERAKNK"
     gene            complement(44540..44890)
                     /gene="chpB"
                     /locus_tag="OQQ26_000952"
     CDS             complement(44540..44890)
                     /gene="chpB"
                     /locus_tag="OQQ26_000952"
                     /EC_number="4.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease toxin ChpB"
                     /protein_id="HCS1856496.1"
                     /translation="MVKKSEFERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLG
                     MTLVAPITQGGNFARYAGFSVPLHCEEGDVHGVVLVNQVRMMDLRARLAKRIGLAADE
                     VVEEALLRLQAVVE"
     gene            complement(44884..45135)
                     /gene="chpS"
                     /locus_tag="OQQ26_000953"
     CDS             complement(44884..45135)
                     /gene="chpS"
                     /locus_tag="OQQ26_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin ChpS"
                     /protein_id="HCS1856497.1"
                     /translation="MRITIKRWGNSAGMVIPNIVMKELNLQPGQSVEAQVSNNQLILT
                     PISRRYSLDELLAQCDMNAAELSEQDVWGKSTPAGDEIW"
BASE COUNT        11462 a        11729 c        11284 g        10839 t
ORIGIN      
        1 gcgcacgtag ttccgggctg acacccttct ctttaagtaa ggttgagaca gagtggcgaa
       61 acgagtgaaa agactttgtt ctgttcctct caagtttcaa tcaacgtgcc aacagcgatt
      121 cattgaacca tgcggaaact ggcctgccat agcctttagt tttatgcggc ttgagttcgg
      181 ggaacaggcg gtcatatccg gcatctttta aggcgttcac atagtctata aaaccgagac
      241 caataagcgt ggagtgaatc ggaattttgc gacgagcatt agcgtttttt agtttctttc
      301 cattttcgct atcgctttca aggttcaagt agtaaacacc gtcctctgcc agaacatcat
      361 ccagcagcaa ttgcgcgatt tcattaactc gcgcccccgt cagcaccccc agtaaaggtg
      421 tccaatagtg aaacgggcaa tattgatgaa atcgcccttg cacgttacgc tcaccggttc
      481 cagccaaaaa ccacggaagt gaaaaaatcg ccttaatttc atgcggttca aacacgtccg
      541 tgtgatcctg gtctcgctcg tttttatcat cgcgtgggaa aaagttttcg catggcgatt
      601 tcagtaattt gccatcagca acagcccact tcattgcacc ataaaggcca ttgatatact
      661 ttctgacgga ctcctccgtc atcaacttat ctccaaattc tgccgctttg gtgatcaact
      721 catccagcgt tttcactcca tatttagctt tgactaaatt ccggtttgcc gggatcgtgc
      781 gcagtttgct ctcataagcc cgaaggaaat cgcgatcaaa ctcttccaac tgaatgtcac
      841 ccatcgcttc gatcataaag ccaaagtaat tacggatatc acttatagcc gactcagata
      901 ccttgccctt gcgccgatgt tttagatatt cagaacataa ccacgacagg cgcttggtgt
      961 aatactttcg attaacatac tcgttatcga tagtagggac cggagcgaca agaggcacgg
     1021 tagtagtatg aacgctagcg gctggaggcg tggtcttagc cagccaatca agccttaggc
     1081 tttctgcatg gactttattg atcaacagtg tatcgggttt gattaccggg caaccggagg
     1141 tgaaaaacca accgccttta gcgtcgcttc cggcagtttt gaacaccgaa gcttctgaat
     1201 aaccgtcgct aataatatta cgtaaatgcg ctggttgcgc agtgagttgc agatagcctt
     1261 tagcaatccc ctcgataccc tgctcttcgc cataattaag aacataactg ccatcaagcg
     1321 ggtctagctc agcctcagag agcgctgcaa cataaaagcc agcctgcccc gtcgccagcc
     1381 agaatacagg cagattacgg ttcatgaccg cctgtattaa ttgcgcaaca ggcaactcaa
     1441 ctgactgagc aaagttagaa agcgagatca tgccctcccc ggcaagcagc ggggcacagt
     1501 catttaaaga ttggtaatcc aattattcat actcttgtaa ggtctgatac cagaccgtca
     1561 acaggagcgt ggacttctgc tttgcttcat gaaggtcatg agtgcctgtt gaagtgtgaa
     1621 tctcacactg tcctgcgtat cgacgaaaac gttggggaac gctgatgcgg acaacataaa
     1681 tgccgctggt tcgacgatag agtttatatc gctgagacat cgcctcgtat agccttttgt
     1741 agtagggcta cgcaattaca agcgaaaaaa cggagaaagt tatttaaaaa caactaatta
     1801 gatgagtctt ggtgccgaag gccggactcg aaccggcacg tatttctacg gttgattttg
     1861 aatcaactgc gtctaccgat ttcgccactt cggcactgaa gaggtatgcg gaaaacgttg
     1921 tggattatac ctgtcgcacg ccaccatgca agcgccagct tgctcgcacc tcgctaagtg
     1981 ctgaaatttt cagcattgca tacagcgatg tgtaaccttt gtcacactcc aggcaccccg
     2041 ccctgccatg ctctacactt cccagagcac accagagaag gaccaaaaaa tgtcgatgat
     2101 aaaaagctat gccgcaaaag aagcgggcgg cgaactggaa gtttatgagt acgatcccgg
     2161 tgagctgaag ccacaagata ttgaagtgca ggtggattac tgcgggatct gccattccga
     2221 tctgtcgatg atcgataacg aatggggatt ttcacaatat ccgctggttg ccgggcatga
     2281 ggtgattggg cgcgtggtgg cactcgggag cgccgcgcag gataaaggtt tgcaggtcgg
     2341 tcagcgtgtc gggattggct ggacggcgcg tagctgtggt cactgcgacg cctgtattag
     2401 cggtaatcag atcaactgcg agcaaggtgc gatgccgacg attatgaatc gcggtggctt
     2461 tgccgagaag ttgcgtgcgg actggcaatg ggtgattcca ctgccagaaa atattgatat
     2521 cgagtccgcc gggccgctgt tgtgcggcgg tatcacggtc tttaaaccac tgttgatgca
     2581 ccatatcact gctaccagcc gcgttggggt aattggtatt ggcgggctgg ggcatatcgc
     2641 tataaaactt ctgcacgcaa tgggatgcga ggtgacggcc tttagttcta atccggcgaa
     2701 agagcaggaa gtactggcga tgggtgccga taaagtggtg aatagccgcg atccgcaggc
     2761 actgaaagcc ctgtcggggc agtttgatct cattatcaat actgtgaacg tcagcctcga
     2821 ctggcagcct tattttgagg cgctgaccta tggcggtaat ttccatacgg tcggtgcggt
     2881 tctcacgccg ctgtctgttc cggcctttac gttaattgcg ggcgaccgca gcatctctgg
     2941 ttctgctacc ggcacgcctt atgagctgcg aaagctgatg cgctttgccg cccgtatcaa
     3001 ggttgcgccg accaccgaac tgttcccgat gtcgaaaatt aacgacgcca tcaagcatgt
     3061 gcgcgacggt aaggcgcgtt accgcgtggt tctgaaagct gacttctaat tcctttgccg
     3121 ggtgcctgtc gcccggcact taactctctt tggaaggcgt ctcgcaatct gctgaattta
     3181 gcggtgaaga gtgcacagcc gttgcctata ctccaggcag gaaactggag gaaatctcat
     3241 gagcgaacca cgtttaattg cccgcacgcc ggacacagaa ctgtttttac tacccgctat
     3301 ggctaaccgt cacggactga ttactggcgc aacggggaca ggtaaaactg tcacgctgca
     3361 aaaactggcg gaatctctgt cagaaatcgg cgttccggtg tttatggccg atgtaaaagg
     3421 tgatttaacc ggggttgcgg cagaaggtac gacctcggaa aaactgctcg ctcggttgaa
     3481 aaatatcggt gtcaacgact ggcaaccgca tgccaatccg gtggtggtgt gggatatctt
     3541 tggcgagaaa ggccatccgg tgcgggcgac ggtttcggat ctggggccgc tgttgctggc
     3601 gcggctgttg aatctcaacg atgtgcaatc tggcgtgctg aatatcatct tccgtattgc
     3661 tgacgatcag ggattgttgc tgctcgactt taaagatttg cgggcgatta cccagtacat
     3721 cggtgataac gccaaatcat tccagaatca gtacggtaat atcagtagcg catcggttgg
     3781 tgccatccag cgcgggctgt ggtcgctgga acagcaaggc gcagcacact tctttggtga
     3841 gccgatgctg gatatcaaag actggatgcg caccgatgcc aacggtaaag gcgttatcaa
     3901 tatcctcagc gccgagaaac tttatcagat gccgaaactg tacgccgcca gcctgctgtg
     3961 gatgctttca gagttgtatg aacaattgcc ggaagcgggc gatctggaga aaccaaaact
     4021 ggtgtttttc ttcgacgaag cacatctgct gtttaacgat gcaccgcagg tactgctgga
     4081 taagattgag caggtgataa gacttattcg ctcaaaaggc gtgggcgtct ggttcgtttc
     4141 gcaaaatccg tccgatattc cggataacgt gctcggccag ctcggtaatc gcgttcaaca
     4201 cgctttgcgg gcttttacgc ccaaagatca gaaagcggta aaagctgcgg cgcaaaccat
     4261 gcgggccaat ccggcatttg atacggaaaa ggcgattcag gaactaggga ccggcgaggc
     4321 gttaatctcg tttctcgatg caaaaggaag tccttctgtg gtggaacggg cgatggtgat
     4381 tgcgccttgt tcgcggatgg gaccggtgac ggaagatgag cgtaatggct tgattaatca
     4441 ctctccggtg tatggcaagt acgaggatga cgtggaccgg gaatccgcct atgagatgtt
     4501 gcaaaaaggc gtacaggcaa gcaccgagca gcaaaataat cctgccgtga aagggaaaga
     4561 ggtggcggtg gatgacggca ttcttggtgg attgaaggat attttgtttg gcactaccgg
     4621 accacgcggc gggaagaaag atggtgtggt gcaaacaatg gccaaaagcg ccgctcgcca
     4681 ggtgacgaat cagattgtac gcggaatgtt ggggagtttg ctggggggga gaagaaggta
     4741 agtcaggtgc ggtctgtgcc cctcacccta accctctccc caaaggggcg aggggaccga
     4801 ttgaactcgt atttgacttt atcaacaatg tgaaagggag ctttcgctcc cttgcttggt
     4861 tacgattttc tcattaacag ccacaggctg attaagaaga agctggcact tggcaacagt
     4921 gcgccgatga tcggcgggat gccataaacc aacgtcagcg ggccgaagat ctggtccagt
     4981 acgtagaaga caaaaccgaa gctgataccg gtgaccacac gcacgcccat cggtacgcta
     5041 cgcagtgggc caaagatgaa cgacagcgcc atcagcatca tcaccgccac ggatagcggc
     5101 tggaagattt tgctccacat gttgagctga taacgtccgg catcctgacc actcgacttc
     5161 agatacttca cgtagttgtg caaaccgctg attgagagtg catccgggtc cagcgccacc
     5221 acgcccagtt tgtctggcgt gaggttggtt ttccaggtac cgctcaccgt ctgcgaaccg
     5281 gtgatctgtt tcggattggt cagatcagat tcatccacct gcgacagacg ccagacttta
     5341 tgttccgggt caaacttcgc ggtagcggca tagcgtacgg attgcagacg acgattctcg
     5401 ttaaaggcat aaatgctgat gccacctaac tcttcgtcac ctttaacccg ctcaatgtag
     5461 acgaagttgt tgccatcttt cgcccataag ccttgctggg tagagagcaa cgagccgccg
     5521 tacatcgcct gcgcacggta gttacgcgcc atctgctcgc cctgcggcgc gacccattca
     5581 ccaatcgcca tcgtcaacaa gaccagcgga atggcggttt tcatcaccga cagcgccacc
     5641 tgcatacggg taaaaccaga agcctgcatc accaccagtt cgctgcgctg cgccagcatc
     5701 ccaagaccaa gcaacgcccc aagcagagcc gccatcggga agaagatttg cacatctttc
     5761 ggcacgctca gcaaggtata cattcctgcg cctaacgcgt cgtaactccc ctgcccggct
     5821 tttttcagtt gatcgacaaa cttgataatg cccgacagcg acaccagcat gaacagcgtc
     5881 atcatgatgg tggtgaaaat agttttaccg atatagcggt caagtacgcc aaaaggttgc
     5941 atcacaccgc tcctttacgc gaaaaactgg cgcgcaggcg gcggaccggc acggtgtccc
     6001 aaaggttgag aacaatcgcc aaagccagat aaatcaggtt aacggtccac atccacagcg
     6061 tcgggtccag cttaccttta ccgccgttcg atttcagaga ggtttggatc aggaagaaaa
     6121 gtagatacag cagcatggct ggcagcatcg atagtacgcg tccctgacgc gggttaacca
     6181 cgctcagcgg tacgaccata agtgccatca taaacacggt gaataccaac gtgatacgcc
     6241 agttcagttc tgcgcgggca cgatcggtgt cagtattcca caatgtacgc atgtccatct
     6301 ggtcggtatc gttcgggtcg agcgccaccg cctggtgacc aatgatcgcc tgataatcct
     6361 ggaagtccgt aatgcggaaa tcacgtaaca gtgcagtgcc ttcgaagcgc gttccctggt
     6421 tgagagtgac gacctgggag ccgtcgcgca gctgggttaa atgtccggaa tcggccacca
     6481 ccacagaagg acgtgcatta ccttttggtc gaatttgcgc gaggaacaca tctttgaaat
     6541 cactgccgtc aacgctttca atgaacagca ccgagctgcc attagtcgct tgctggaatt
     6601 gcccttgcgc cagcgccgcc atgccagggt tcgctttcgc ttctgctaac acttcatcct
     6661 gatgacgcga tgaccacggt cccgcccaca tcacgttaac cgccgcgacg attgccgtga
     6721 ataccgcaag gatcattgcc gctttcacca gaaccgcttt gctcaggccg caggcatgca
     6781 ttaccgtaat ttcactttcg gtatacagtt tgcccagcgt catcagcagc ccgaggaaca
     6841 ggcttaatgg caggataagc tgcgccattt ccggcacgcc caacccgaga agggagagca
     6901 ccagattcgc cggaatatcg ccgtcaaccg ctgcgccgag gatcctcact aacttttgac
     6961 agaagaagat caaaagcaag atgaagagta tcgccaactg gcttttgagc gtctcccgca
     7021 ccagatatct tatgattatc actttaaata cgcccgtaaa aactcgtctt ttgcaggatt
     7081 ttagcttgtt tcatggctta aacgtcattt attctcttga gtcgtcgaaa tcgtcgctaa
     7141 gataattata ctcaacggat tcacctctca gattttgttc tgacgtgcca atgccgtaat
     7201 aacgttaaga ttaacacgaa gtcatcgcaa cagcggacat gagttacgaa agcttgcaat
     7261 tctatctgta gccaccgccg ttgtctttac gattcaggag cgtagtgcat ggagtttagt
     7321 gtaaaaagcg gtagcccgga gaaacagcgg agtgcctgca tcgtcgtggg cgtcttcgaa
     7381 ccacgtcgcc tttctccgat tgcagaacag ctcgataaaa tcagcgatgg gtacatcagc
     7441 gccctgctac gtcggggcga actggaagga aaaccggggc agacattgtt gctgcaccat
     7501 gttccgaatg tactttccga gcgaattctc cttattggtt gcggcaaaga acgtgagctg
     7561 gatgagcgtc agtacaagca ggttattcag aaaaccatta atacgctgaa tgatactggc
     7621 tcaatggaat cggtctgctt tctgactgaa ctgcacgtta aaggccgtaa caactactgg
     7681 aaagtgcgtc aggctgtcga gacagcaaaa gagacgctct atagtttcga tcagctgaaa
     7741 acgaacaaga gcgaaccgcg tcgtccgctg cgtaaaatgg tgttcaacgt gccgacccgc
     7801 cgtgaactga ccagcggtga gcgcgcgatc cagcacggtc tggcgattgc cgcagggatt
     7861 aaagcagcaa aagatctcgg caatatgccg ccgaatatct gtaacgccgc ttacctcgct
     7921 tcacaagcgc gccagctggc tgacagctac agcaagaatg ttatcacccg cgttatcggc
     7981 gaacagcaga tgaaagagct ggggatgcat tcctatctgg cggtcggtca gggttcgcaa
     8041 aacgaatcgc tgatgtcggt gattgagtac aaaggcaacg cgtcggaaga tgcacgccca
     8101 atcgtgctgg tgggtaaagg tttaaccttc gactccggcg gtatctcgat caagccttca
     8161 gaaggcatgg atgagatgaa gtacgatatg tgcggtgcgg cagcggttta cggcgtgatg
     8221 cggatggtcg cggagctaca actgccgatt aacgttatcg gcgtgctggc tggctgcgaa
     8281 aacatgcctg gcggacgagc ctatcgtccg ggcgatgtgt taaccaccat gtccggtcaa
     8341 accgttgaag tgctgaacac cgacgccgaa ggccgtctgg tactgtgcga cgtgttaact
     8401 tacgttgagc ggtttgagcc ggaagcggtg attgacgtgg cgacgctgac cggtgcctgc
     8461 gtgatcgcgc tgggtcatca tattactggt ctgatggcga accataatcc gctggcccat
     8521 gaactgattg ccgcgtctga acaatccggt gaccgcgcat ggcgcttacc gctgggtgac
     8581 gagtatcagg aacaactgga gtccaatttt gccgatatgg cgaacattgg cggtcgtcct
     8641 ggtggggcga ttaccgcagg ttgcttcctg tcacgcttta cccgtaagta caactgggcg
     8701 cacctggata tcgccggtac cgcctggcgt tctggtaaag caaaaggcgc caccggtcgt
     8761 ccggtagcgt tgctggcaca gttcctgtta aaccgcgctg ggtttaacgg cgaagagtaa
     8821 ttgcgtcagg caaggctgtt attgccggat gcggcgtgaa cgccttatcc gacctacaca
     8881 gcactgaact cgtaggcctg ataagacaca acagcgtcgc atcaggcaat gctgttattg
     8941 tcggatgcgg catgaacgcc ttatccgacc tacacagcac cgaactcgta ggcctgataa
     9001 gacgcggcag cgtcgcatca ggcaatgctg ttattgtcgg atgcggcgtg agcgccttat
     9061 ccgacctaca cacagcactg aactcgtagg cctgataaga cacaacagcg tcgcatcagg
     9121 cgctgcggtg tatacctgat gcgtatttaa atccaccaca agaagcccca tatatgaaaa
     9181 acgcaacgtt ctaccttctg gacaatgaca ccaccgtcga tggcttaagc gccgttgagc
     9241 agctggtgtg tgaaattgcc gcagaacgtt ggcgcagcgg taagcgcgtg ctcatcgcct
     9301 gtgaagatga aaagcaggct taccggctgg atgaagccct gtgggcgcgt ccggcagaaa
     9361 gctttgttcc gcataattta gcgggagaag gaccgcgcgg cggtgcgccg gtggagatcg
     9421 cctggccgca aaaacgcagc agcagcccgc gcgatatatt gattagtctg cgaacaagct
     9481 ttgcagattt tgccaccgct ttcacagaag tggtagactt cgttccttat gaagattctc
     9541 tgaaacaact ggcgcgcgaa cgctataaag cctaccgcgt ggctggtttc aacctgaata
     9601 cggcaacctg gaaataatgg aaaagacata caacccacaa gatatcgaac agccgcttta
     9661 cgagcactgg gaaaagcagg gctactttaa gcctaatggc gatgaaagcc aggaaagttt
     9721 ctgcatcatg atcccgccgc cgaacgtcac cggcagtttg catatgggtc acgccttcca
     9781 gcaaaccatc atggatacca tgatccgcta tcagcgcatg cagggcaaaa acaccctgtg
     9841 gcaggtcggt actgaccacg ccgggatcgc tacccagatg gtcgttgagc gcaagattgc
     9901 cgcagaagaa ggtaaaaccc gtcacgacta cggccgcgaa gctttcatcg acaaaatttg
     9961 ggaatggaaa gcggaatccg gcggcacgat tacccgtcag atgcgccgtc tcggcaactc
    10021 cgtcgactgg gagcgtgaac gcttcaccat ggacgaaggc ctgtccaatg cggtgaaaga
    10081 agttttcgtt cgtctgtata aagaagacct gatttaccgt ggcaaacgcc tggtaaactg
    10141 ggatccgaaa ctgcgcaccg ctatctctga cctggaagtc gaaaaccgcg aatcgaaagg
    10201 ttcgatgtgg cacatccgct atccgctggc tgacggtgcg aaaaccgcag acggtaaaga
    10261 ttatctggtg gtcgcgacta cccgtccaga aaccctgctg ggcgatactg gcgtagccgt
    10321 taacccggaa gatccgcgtt acaaagatct gattggcaaa tatgtcattc tgccgctggt
    10381 taaccgtcgt attccgatcg ttggcgacga acacgccgac atggaaaaag gcaccggctg
    10441 cgtgaaaatc actccggcgc acgactttaa cgactatgaa gtgggtaaac gtcacgcgct
    10501 gccgatgatc aacatcctga cctttgacgg cgatatccgt gaaagcgccc aggtgttcga
    10561 taccaaaggt aacgaatctg acgtttattc cagcgaaatc ccggcagagt tccagaaact
    10621 cgagcgtttt gctgcacgta aagcggtcgt tgctgcggtt gacgcactcg gcctgctgga
    10681 agaaattaaa ccgcacgacc tgaccgttcc ttacggcgac cgtggcggcg tagttatcga
    10741 accaatgctg accgaccagt ggtacgtgcg tgccgatgta ctggcgaaac cggcggttga
    10801 agcggttgag aacggcgaca ttcagttcgt accgaagcag tacgaaaaca tgtacttctc
    10861 ctggatgcgc gatattcagg actggtgtat ctctcgtcag ctgtggtggg gtcaccgtat
    10921 ccctgcatgg tacgacgaag caggtaacgt ttatgttggc cgcaacgaag aagaagtgcg
    10981 caaggaaaat aacctcggtg ccgacgttgc cctgcgtcag gacgaagacg ttctcgacac
    11041 ctggttctct tctgcgctgt ggaccttctc taccctaggc tggccggaaa acaccgacgc
    11101 actgcgccag ttccacccaa ccagcgtaat ggtatctggt ttcgacatca tcttcttctg
    11161 gattgcccgc atgatcatga tgaccatgca cttcatcaaa gatgaaaatg gcaaaccgca
    11221 ggtgccgttc cacaccgttt acatgaccgg cctgattcgt gatgacgaag gccagaagat
    11281 gtccaaatcc aagggtaacg ttattgaccc gctggatatg gttgacggta tttcgctgcc
    11341 agaactgctg gaaaaacgta ccggcaatat gatgcagccg cagctggcgg acaaaatccg
    11401 taagcgcacc gagaagcagt tcccgaacgg cattgagccg cacggtactg atgcgctgcg
    11461 cttcaccctg gcggcgctgg cttctactgg tcgtgacatc aattgggata tgaagcgtct
    11521 ggaaggttac cgtaacttct gtaacaagct gtggaacgcc agccgctttg tgctgatgaa
    11581 cacagaaggt caggattgcg gcttcaacgg cggtgaaatg acgctgtcgc tggcggatcg
    11641 ctggattctg gcggagttca accagaccat caaagcgtac cgcgaagcgc tggacagctt
    11701 ccgcttcgat atcgccgcag gcattctgta tgagttcacc tggaaccagt tctgcgactg
    11761 gtatctggag ctgaccaagc cggtaatgaa cggtggcacc gaagccgaac tgcgcggtac
    11821 tcgccatacg ctggtgaccg tgctggaagg tctgctgcgc ctcgcgcatc cgatcattcc
    11881 gttcatcacc gaaaccatct ggcagcgtgt gaaagtactt tgcggtatca ctgccgacac
    11941 catcatgctg cagccgttcc cgcagtacga tgcatctcag gttgatgaag ccgcactggc
    12001 cgacacagag tggctgaagc aggcgatcgt tgcggtacgt aacatccgtg cagaaatgaa
    12061 catcgcgccg ggcaaaccgc tggagctgct gctgcgtggt tgcagcgcgg atgcagaacg
    12121 tcgcgtaaat gaaaaccgtg gcttcctgca aaccctggcg cgtctggaaa gcatcaccgt
    12181 gctgcctgcc gatgacaaag gtccggtttc cgttactaag atcatcgacg gcgcagagct
    12241 gctgatcccg atggctggcc tcatcaacaa agaagatgag ctggcgcgtc tggcgaaaga
    12301 agtggcgaag atcgaaggcg aaatcagccg tatcgagaac aagctggcga atgaaggctt
    12361 tgtcgcccac gcaccggaag cggtcatcgc gaaagagcgt gagaagctgg aaggctatgc
    12421 agaagcgaaa gcgaagctga ttgaacagca ggctgttatc gccgcgctgt aatcaaaaca
    12481 cagtgatgaa aacgaaggcc ggagcatgct ccggcctttt ttatctctta cagaaatggt
    12541 aaagaaggca taattccccg tgaaatcctg gctaagaagc ctttatctgg ttgttcttct
    12601 ttattgatta aaggaaggtc atccaaatcg cccagcaaat acgtattttt tgcctgccag
    12661 tcaatcatcc atattttcag cagtggataa gccagaccgc ccgtaatccc ggatctcacc
    12721 accaacgcac acatgagata aagcataccg tggtatgtta aagttgagcg aaaacgaata
    12781 cgcccatcat tcagtgacag gttgctcata aaatgatttc gcaacgacac cgttaaataa
    12841 ctggtgctaa cagcaatccc aaaataatag attaactgcg cgattatcat tttacgttgc
    12901 atttccataa attgctgtaa attctcagta tcatcatttg catacacaga actatcatac
    12961 gcatttaata tttgatcgaa gataatataa ccagcaacag cgagaaaagg taataaagct
    13021 aaaaatgcga gaatggcata ttttatacaa tacgtagtat ctaatttcac cttgaaacga
    13081 tgtataccga aactggtatt gctccagaga aaactcatta ccagactata taaagtacca
    13141 ttaaaaatac caatggaaac aataccaact attgccatca gaaccacaga tacaataaca
    13201 ctacttgaac tattggcatg tagcatcttt gtcgagataa agaaaacagt ccccatccca
    13261 atggccatta aaatcggcaa gaaaaaggtt acccaccaga accctttcat agagcaatta
    13321 aaactaaatc ttacgccgtt gagactggtc atcaaggcct gataacgcag tccttttgct
    13381 gccataaata taagcaaaac caacagtgac aaagtcaaaa cacagccaac aagcggcata
    13441 tctgctgaca ctgtcattaa gattgcgaaa tagaaaaaaa caaaaacaag acaactaaca
    13501 aaaacattcc caccagtaat tccataagaa aatcgttgtc cgttaacttc catattagca
    13561 tagagataac gcttacattt cattaatgcc catggtaaat agatacctag cgttataatc
    13621 gttaacaaca cattcaccac acaaataaga aaatatctct cacctgtacc atgaaaaaca
    13681 aacgaatggg acggaacatc catttcatta ataacttgaa ccataaaaac cccctgaatt
    13741 aaaaaatcca ttgatataat ttatagatac agacagtaaa atgttctgcc acgttacaat
    13801 actcttatca gtaataggct ggcaaaaact ttattacttt ataagtcgct tgcgcacgta
    13861 agaagagagt ggtattaaac aaatgtataa ttactttatt tttattgggt taaactatga
    13921 ataacattgc gccgcaatca cctgtaatgc gtcgcctgac gctgcaggat aatcccgcta
    13981 tcgcccgcgt cattcgtcag gtatccgccg aatacggtct taccgctgat aaaggctaca
    14041 ccgtcgccga tccgaacctt gacgagttgt atcaagtgta tagtcagcct ggccatgcat
    14101 attgggtggt tgagttcgat ggtgaagtgg tcggcggcgg tgggattgcg ccattagcag
    14161 gtagtgaatc ggacatttgc gaactgcaaa agatgtattt tcttccggct attcgcggta
    14221 aagggctggc gaaaaaactg gccttaatgg cgatggagca ggcacgagag atgggcttca
    14281 aacgctgcta tctggaaacg accgcttttt taaaggaagc cattgcgctt tatgagcatt
    14341 tgggctttga gcatatcgac tatgcgcttg gctacacggg ccatgtcgat tgtgaagtgc
    14401 ggatgctacg cgaactctaa aaaaatgccc gctagtgtgt gctatcgggc attttaatca
    14461 attaattagt ggcgaacccc atcatcgtct tcgtcgacaa aatcttcatc gtcgccgtct
    14521 tcgccgttgg gatcttcaaa gtaagtgccc caaccgtcgt actcaacgtc aaatttctcc
    14581 gccagcgtca tcagttgttc aacctgggca tcgatcagat cagcattcaa cgcgcactcg
    14641 ctgaggatgt cgcagcaaat cacgatatca ccatcttcaa cttccagctc ttctggatcg
    14701 gtcacttcgt aaccgagttt aaacgcttca actgctgctt tttccagggt ttccagatcg
    14761 tctgcggaaa gatggtgttc gatggtgtac agcgcgtccg gatcgctgcc atcttccagt
    14821 aattcttcaa taatcaaacg tgtttcttca cgctgttctt ccagttgttc cgggtttgcc
    14881 atggctcatt cctcttaatg tcctgccgat actcttattg tcacacacca ctgacattgc
    14941 ctccaccttt gtgacaaaga tttatgcttt agacttgcaa ataaataact atctatataa
    15001 attgaatttt aattcattga ggcgatagcc acaggaggga tctatgtccg ggttttatca
    15061 taagcatttc ctgaaattac tcgatttcac gccagctgaa ctcaacagcc tgttgcagtt
    15121 agccgcgaag ctgaaagccg ataagaaaag cagtaaagaa gaagccaaac tcactggtaa
    15181 aaacatcgcg ctcatcttcg aaaaagactc gactcgtacc cgatgctctt tcgaagttgc
    15241 cgcatatgac caaggtgctc gcgttactta tctcggccca agcggcagcc agattggtca
    15301 taaagagtcg attaaagaca ctgcccgcgt gcttgggcgc atgtatgacg gtattcagta
    15361 tcgcggctat ggtcaggaga ttgtcgaaac actggcggaa tacgctggcg tgccggtatg
    15421 gaacggcctg accaatgagt ttcaccccac acagttgctg gcggatctcc tcaccatgca
    15481 ggagcattta cccggcaaag cgttcaacga aatgacgctg gtctatgcag gtgacgcacg
    15541 taacaacatg ggcaattcga tgctcgaagc tgcagcgctt accggtctgg atttgcgtct
    15601 ggtcgcgcca caggcatgct ggccggaagc tgcgctggtt acggaatgcc gcgccctggc
    15661 acagcaaaat ggcgggaata ttacgctaac ggaagatgta gccaaaggag ttgaaggtgc
    15721 tgactttatc tataccgatg tatgggtgtc gatgggtgaa gcaaaagaga aatgggctga
    15781 acgcattgca ttgctgcgtg attatcaggt gaacagcaag atgatgcagt tgactggtaa
    15841 cccggaggtc aaattcctcc actgcctgcc cgcgtttcat gacgaccaaa cgacgcttgg
    15901 caagaaaatg gcggaagagt ttggcctaca tggcggaatg gaagtgactg atgaggtctt
    15961 cgaatctgcc gccagcattg tatttgatca ggcggaaaac cgcatgcata ccatcaaagc
    16021 ggtgatggtc gcgacgctca gtaaataatt gatatcgcta taaagatgcc gggaaacaca
    16081 aaaaatatct cggcatcaca ttattttatg tagtaatagt tctattctac cacccaaatt
    16141 tttctattac tatacgtaaa tcttccggag gatttaattt tcccaactgt tcattattaa
    16201 tatattcata tatattgatt ttgccattcc ggaggatttt catcattctt gttctaattt
    16261 ttaattcatt acccatcttt tcttcaaaaa tcttaacgac ataacccgga tgttttttta
    16321 caatttcatt tgttttttct tcattaccat aaacatatcc taactcatta agatacagct
    16381 gttcaccctc atacttctta agtaattgat agaagtacca cttcgcaaaa tcaggttgct
    16441 tcatgaaaaa atccttcaaa aaaatatcat ttactaaaat gctgacaggc acttcattaa
    16501 atagcaactt aacatcatca aataacctta gtattaagcg tgatttttct tgattgctta
    16561 agttaaaatc attgacatac gcaaccaact tatcccaaat ccattcctgt aatttacggc
    16621 tatttttata ggattcttta tcgagattga aaaataaggt ctcagctatt ttaattttag
    16681 attaatcgca gctaaaatct ttagattgat cgcgactaaa atcaatatga tttatcacag
    16741 agcatgcata ctttatcttt tcagaatcac caaaatattg catgctttta ttaaaacacc
    16801 aatccagtat tcttacatca ttaatatatg gggattttaa aaaagtctcc agaatcgaac
    16861 cgatgaccgg tgtaaggtta acttacgcat catctaagga atcaataaga atatgagaca
    16921 ggttaacttt gatgtcatta atttcattgt cagtagcttt cttattatta ataagataat
    16981 tatttaaggc tttaagggca tctatttctt tcagtatccc tttttcacca agtaagtatg
    17041 aaatcgattc attacacata taaggcatta tatagcagat gttctttcct tattgctaat
    17101 aatgcattgt tcaatggttt ttctaataaa tccgtaatcg tagaatcaac tgagttttta
    17161 caactcacct gcgagtaatt taagtcatga ggattattta actcctgcgg aacatttaat
    17221 agaagagcta tttccttgtt agcttcgcgt tggtaacatg ccagaatctt gttagtaatc
    17281 aggtgtaatg aactctcatc ttttctttca aaggactttc cttcataacg attagtcgaa
    17341 ccatcaggtt gttgaaatat aatagccgta tgtccttgac gagtccccat agtagtgaaa
    17401 gtggaaagtg tgatttctat ttccacctta gataaatccg ctcgttctcc ttcaggatta
    17461 ttcataacaa acttcattat ctcactacca tcattatttt tgatataaga tgaggactta
    17521 atatgagcca tcatatttct acccgcttcg ttggagcgtt tgctaaaatc cacataaccc
    17581 agagtaaata tcttagccaa aaactccaaa aatgctctgg gagaaagaat attgcttctg
    17641 ctattctgcc ctccggcaat tcgggcaaaa tcattcattc ccacatacca ggtatctaag
    17701 tcttcatttt tttgtttaca attgtcggct gatgtaatgt tttgagaaaa attccaacct
    17761 gatattttgc tcatgacgga ctccttgagt taataagaac gtctaagcat tacaaatttt
    17821 actcacaaaa aaatatcaaa aaacgctctt ttcacaaact cgccgtaaac ctggagttat
    17881 ttacggcgaa aagtcatcac gccatcagca tcttcactac tgctttgcga acctgggctg
    17941 gtgcacccac tgcgcacagc ggtttatgca cttcccccgg ataaaacaca acaaaatcac
    18001 cttcatttag gataactgtt ttctcatcaa cgccttccgg caaaaatgcg atgtctttat
    18061 cagctaacca gtcggtatcc ggcgtgcctg caggttgcgt gctgaaggtc atgccttcct
    18121 gacctcttaa cacaatctga atgtcgagat agcgggcatg gtactccgca cggcgagctt
    18181 cgtacggctc ggtcatatct tccgagataa gataaaacag acgattgcct tcgatatcgt
    18241 gcttgccctt tggcgtttct gccgtaacgt gtgctttgat atgctcaatc gcctggcgta
    18301 actcctgggg tagccacggc tgaagattat gaatatttcc gatgatcatc ttttccactc
    18361 cttaattaaa acaacgtttc atttctatcg ttatacgaaa agatgatcaa ttccgctagc
    18421 cttaacgcgt gaattattgt cttatcacaa cttatcggca ggcgcgttcc cgcctttcgg
    18481 gtcaaggtca gcatcactcc tcgagaatag tttttatcgc ttcccccgcc agtgcagctg
    18541 ttgcacagag ttgttcgatg gagtgcccct cccgtgcctt cgcagaaagc cctgacatca
    18601 cggtactcat aaaatcagtc acacattttg cgctttgtgg atgccgcctg gcgatatagt
    18661 cataaatggt cgtttctgcg gcgtgataat attgaacggc aatatcacgc gcttgtggat
    18721 catgactatg aataccttca agaaccatac agccagcgca gccgccgttt tggctatatc
    18781 tgcgcgccgc ttcttttaat acctcaacca gacactcgcc taccggacga tcatcacgaa
    18841 gaatatcggc aagcggaata gcttccgtac caacatattc attgagtaca cggctaaata
    18901 acccagcctt actgccaaaa gccgcgtaga ggctcggggg gttaatacca agataatcag
    18961 taacttcagc aacactgaca gcatcgaaac ctttttggtg aaaaagcact tttgccgcag
    19021 agactgcctg ctcaggagcg aaacgtctgg gacgacctgg aacgcgagat tgttttttag
    19081 tgaccattac aaaacttgtt gacagaaagt taaaacagtt ttgtaatgca tgttacataa
    19141 taaatcaagg agtccttatg ggcgctttta caggtaagac agttctcatc ctcggtggca
    19201 gtcgtggaat cggtgccgct atcgtacgtc gtttcgtcac cgatggggcc aatgtacgat
    19261 tcacctatgc ggggtcgaaa gatgccgctg aacgcctggc acaagagact ggagcgacag
    19321 cagtattcac agatagtgct gacagagacg ctgtcattga tgtcgttcgt aagagtggcg
    19381 cattggatat tctggtagta aatgcaggta ttggcgtctt tggcgatgcc ctggaattaa
    19441 atgccgacga tattgatcgc cttttcaaaa tcaatattca tgctccttat catgcctctg
    19501 ttgaagccgc ccggcagatg cccgaaggcg ggcgcatctt aatcatcggc tccgtgaatg
    19561 gcgatcgtat gcttgttgca ggcatggctg cttatgccgc cagtaaatct gccctgcaag
    19621 gcatggcgcg cgggctggcc cgtgatttcg gaccgcgtgg gatcaccatc aacgtcgtcc
    19681 agccagggcc aattgatacc gacgctaatc ccgccaacgg gccaatgcgc gatatgttgc
    19741 atagttttat ggctatcaaa agacatgggc aaccggaaga ggtcgctggt atggtcgcat
    19801 ggttagcagg gccagaagcc agttttgtta ccggcgcgat gcataccatt gatggcgcgt
    19861 ttggcgcata accgactacg ctcaattaag cccagccatt atccatgatg tccgggtttt
    19921 gtttactcac gtcgtccgct aaaagcggct cccggtaaat agaaatcttc tgttcatgtc
    19981 gtaaatcttg aggataacca aatggtagaa agaaccgctg ttttccctgc tagccgacat
    20041 tcactgtatg ctgagcatcg ttattctgcg gctattcgtt ccggcgattt gctgtttgtt
    20101 tccgggcaag taggaagtcg agaggacgga acaccagaac ccgattttca gcaacaagtc
    20161 agactggcat ttgataattt gcatgcgacc ctggctgctg cgggatgcac ttttgacgat
    20221 atcattgatg ttacgagctt ccataccgat ccagaaaacc aatttgaaga catcatgacg
    20281 gtgaaaaatg aaatatttag cgccccacct tatccaaact ggacggcggt gggcgttaca
    20341 tggctggcag gctttgattt tgaaattaaa gtgatagcgc gcatccctga gcagtaagca
    20401 atagtgttag ccgttcgttt tcacactccg ccctataagt cggatgaatg gaataaaatg
    20461 catatctgat tgggtgaaag tgaaaaagaa aaaagcagga aatgtctgca attattgata
    20521 ccgaaggaca gttcccctcc agaatcacat agaataaaaa tgcatatatc ttgactttta
    20581 attcaaacaa accgtttgcg ctgacaaaat attgcatcaa atgcttgcgc cgcttctgac
    20641 gatgagtata atgccggaca atttgccggg aggatgtatg gttcagtgtg ttcgacattt
    20701 tgtcttaccg cgtctgaaaa aagacgctgg cctgccgttt ttcttcccgt tgatcaccca
    20761 ttcccagccc ctcaatcgag gggctttttt ttgcccaggc gtcaggagat aaaagatggc
    20821 taatccgcta tatcagaaac atatcatttc cataaacgac cttagtcgcg atgaccttaa
    20881 tctggtgctg gcgacagcgg cgaaactgaa agcaaacccg caaccagagc tgttgaagca
    20941 caaagtcatt gccagttgtt tcttcgaagc ctctacccgt acccgcctct ctttcgaaac
    21001 atctatgcac cgcctgggtg ccagcgtggt gggcttctcc gacagcgcca atacatcact
    21061 gggtaaaaag ggcgaaacgc tggccgatac catttcggtt atcagcactt acgtcgatgc
    21121 gatagtgatg cgtcatccgc aggaaggtgc ggcgcgcctg gccaccgagt tttccggcaa
    21181 tgtaccggta ctgaatgccg gtgatggctc caaccaacat ccgacgcaaa ccttgctgga
    21241 cttattcact attcaggaaa cccaggggcg tctggacaat ctccacgtcg caatggttgg
    21301 tgacctgaaa tatggccgca ccgttcactc cctgactcag gcgttagcga agttcgatgg
    21361 caaccgtttt tacttcatcg cgccggacgc gctggcaatg ccgcaataca ttctggatat
    21421 gctcgatgaa aaagggatcg catggagtct gcacagctct attgaagaag tgatggcgga
    21481 agtagacatc ctgtacatga cccgcgtgca aaaagagcgt ctggacccgt ccgagtacgc
    21541 caacgtgaaa gcgcagtttg ttcttcgcgc cagcgatctc cacaacgcca aagccaatat
    21601 gaaagtgctg catccgctgc cgcgtgttga tgagattgcg acggatgttg ataaaacgcc
    21661 acacgcctgg ttcttccagc aggcaggcaa cgggattttc gctcgccagg cgttactggc
    21721 actggttctg aatcgcgatc tggtactgta aggggaaata gagatgacac acgataataa
    21781 attgcaggtt gaagctatta aacgcggcac ggtaattgac catatccccg cccagatcgg
    21841 ttttaagctg ttgagtctgt tcaagctgac cgaaacggat cagcgcatca ccatcggtct
    21901 gaacttgcct tctggcgaga tgggccgcaa agatctgatc aaaatcgaaa ataccttttt
    21961 gagtgaagat caggtagatc aactggcatt gtatgcgccg caagccacgg ttaaccgtat
    22021 cgacaactat gaagtggtgg gtaaatcgcg ccccagtctg ccagagcgca tcgacaatgt
    22081 gctggtctgc ccgaacagca actgtatcag ccatgccgaa ccggtttctt ccagctttac
    22141 cgtgcgaaaa cgcgccaatg acatcgcact caaatgcaaa tactgtgaaa aagagttttc
    22201 ccataatgtg gtgctggcca attaattgcg gttggtaata aaagtctggc tccctataat
    22261 gagccagact ttttaccgct gtaataaagg agaaatcatg agcaaaacta tcgcgacgga
    22321 aaatgcaccg gcagctatcg gtccttacgt acagggcgtt gatctgggca atatgatcat
    22381 cacctccggt cagatcccgg taaatccgaa aacgggcgaa gtaccggcag acgtcgctgc
    22441 acaggcacgt cagtcgctgg ataacgtaaa agcgatcgtc gaagccgcag gcctgaaagt
    22501 gggcgacatc gttaaaacca ccgtgtttgt gaaagatctg aacgacttcg caaccgtaaa
    22561 cgccacttac gaagccttct tcaccgaaca caacgccacc ttcccggcac gttcttgcgt
    22621 tgaagtagcc cgtctgccga aagacgtgaa gattgagatc gaagcgatcg ctgttcgtcg
    22681 ctaatatcta ctgaaagata atccaggtat tgcgcctggg ttatctgatt caaccacgga
    22741 gggttgaaga tggctaaacc ccgtttcact aacgaacaaa tcgctgaaat tttacagcag
    22801 tcaaaagtag ggggcgtcta ataaggagct atgtgaacac tatcaattta gcgttagcac
    22861 gctgcggcgc tggcaagaac agcacgctga cggcatcaga agcgaattaa aaaaaacaga
    22921 atccaaagca caaatcgtct ttctggtttt ctttgctatc gctattctac tgactcttat
    22981 atttgacaaa cctacaggtg gatgggtaat tccgccttta ttaatctatt gtgtttatta
    23041 tatccgccag tatcgcaaca tctctggcag acatattaaa aaagaagata tctatctctc
    23101 tcgttcagta aataacagct atagcgccct ttataatttg agctggacgt ttatttgttt
    23161 ttttattttt gcagtaattt atttttttat tcaggtgttt tcgtaaaaga ctgacctgaa
    23221 agagtatttc aggccagtct catcacttgc ttactgccag ccgtaacgac ggctataaaa
    23281 tcctttcacc aactgggtta acgtcatata ccctgccaga atcgcaacca gccacgggaa
    23341 atagcttaac ggcagcgcct gcagctgcag ataactggcc agcggtgaaa acggcaatgc
    23401 gatcccgaca atcatcacga tcacggtcat gatcattaac ggccacgatg cacagctctg
    23461 aataaacggc acacggcggg tacggatcat atgcacaatc agcgtttgcg acagtaagcc
    23521 caccacaaac catcccgact ggaacagcgt ttgcgtttcc ggcgtgttgg catggaatac
    23581 ccaccacatc aggcaaaacg tcagaatatc gaagatcgag ctgatcggtc cgaagaagat
    23641 cataaatcgc cccagatccg ccggattcca acgctgcggc ttttgaattt gctcgtcatc
    23701 aacgttatca aacgggatcg ccacctgtga cacatcatac agcaggttct gaataagcaa
    23761 gtgtaacggc aacatcggca ggaagggcaa gaaagcactc gccaccagca cactgaacac
    23821 attaccgaag ttggagctcg ccgtcatttt gatgtatttc agcatgttgg cgaaagtgcg
    23881 acgtccttca ataaccccct cttccagcac catcaggctt ttttccagca ggatgatatc
    23941 agccgcttca cgggcaatat ctaccgcgcc gtccacagaa atgccgatat ccgcagcgcg
    24001 taaggcgggc gcatcattaa taccatcgcc cataaagcca accacatgcc cttcgcgctt
    24061 cagcaacgtt acgatgcgtt ctttatgcat cggcgtcaga cgagcaaaca gcgtggtgcg
    24121 ctgtgcgaga tttgccagtt cgtcgtcaga tagcgtttca atatcactac caatgaccac
    24181 ctctcccgcg tccagcccca cttcatggca cactttcgct acaactaact cactgtcgcc
    24241 agtaaggatt tttacggtaa ttccactcgc ttttaatgcc ttcagtgccg gagcggttgt
    24301 ctcttttggc ggatcaagga aagcaatata tccttcgagg atcaggtcgg attcatccgc
    24361 ccgctggtaa tctccttcac gcgctggcag gtatttcgtc gccaccgcaa ccacgcgcac
    24421 cccctgacga ttcagcgtat cagtaacccg cttaatctta cgcagcatgg tgtcatcgag
    24481 cggtactatc tcgccattgt gacgcacttg cgaacacaca ttgaggattt cctgcaatgc
    24541 gcctttgcaa accagctgat ggtgttcggt attttctgcc actaccaccg acatccgacg
    24601 acgctcgaaa tcaaacggaa tctcatcaat tttttgccaa cggctggcca gcgagcgcgc
    24661 tgactcttca tccgtacctt cgagcaccgc tgtatcaagc agatttttaa gtccggtctg
    24721 gtaatgactg ttcaaccacg cgctatgcag cacgcgttcg ctggttttac cggagatatc
    24781 ggtatgattc tccagcacaa ttttgtcctg tgtcagggtg ccggttttat cagtgcacag
    24841 aatatccatt gcgccaaagt tctgaatggc atccagatgt ttgacgatca ctttctgttt
    24901 cgacagcttt actgcgccgc gcgccagcgt cgaggtaaca atcatcggca acatttccgg
    24961 cgttaggcct accgcgaccg aaagcgcaaa cagcgccgct tcccaccagt cgcctttggt
    25021 gtagccattg attaacagta ccaccggtgc catcaccagc ataaagcgaa tcagcagcat
    25081 actgacgcgg ctgatccctt gctgaaaggc attcggctcg ctttcctgct cactaacacg
    25141 ccccgccagt tgaccaaacc aggtattggc acctgtagca atcaccattg cttgtgccgt
    25201 gccgctcacc acggtggtgc ccataaaaca cagggtgtcg cactccagcg gattgctgtg
    25261 ctccggctgg cgagtggtag ctgctttttc tacgggcaga gactcaccgg ttaacgacgc
    25321 ctgagcgacg aacagatccc gcgcctgcaa gatacgtaaa tctgccggga tcatatcccc
    25381 cgccgccagt tttataatat cgccgggcac cagctggtcg atcgggatct ccagccagcc
    25441 attttcgcct ttgtcgttaa ttacgcgcag caccgtcgcg gtattgctga ccatcgcttt
    25501 cagggcatct gccgctttag tggaacgtgc ttcctgaata aagttcagca acgtagaaat
    25561 agcgaccatt agcgcgataa cgcccgcggc aaataaatct tccgtggcgt aagaaatagc
    25621 gccgagaatg gtgagtaaaa tattaaatgg gttgcgatag cagacccata aatgtaccca
    25681 ccacggcgac ggttgttgtg cgggtaattt attttcacca tgttgttcgc gggcagattc
    25741 cacttccgcc tgatttaacc cttccggatg ggtgtcgaac gttttccata attcttcttc
    25801 gggcatcacc gccattttca ggcaatgcgc acttaaggac ggcgggaccg ccgtattcac
    25861 tgtctgctgc gcgccaggca atggatcgcg atgaaccaga cgggaaggta aatggcgaat
    25921 gagccgggta aaaatttctt taaacataag gagtccctcc gcactgtctg aaacagtaca
    25981 gaaatgtctt caggcgtggc gaagccttac ctgaaggtaa taaagctgag cagggacgtt
    26041 aaaacgtcac ggccttacgc atccggtaac gccgtgaaaa gacgggctta ccggaaaagt
    26101 tttaatctcc gtcgagggag aggcgtggga tcaggttcca tataacctcc ggtaagtgaa
    26161 aaaagcgccg caaataataa ggagaatcca ataatattcg tagcatctat ggcgatataa
    26221 tacctgctgg caactaaacc aacgataaac cagactttac ccattgctga atgcacgggt
    26281 aaagttaggc tcaaataatt aaacaacacg ttacaggaca acaggatgca aaatcggctg
    26341 accatcaaag acatcgcacg cttaagcggc gtggggaaat ctacagtttc ccgggtgctg
    26401 aataacgaaa gcggcgtgag ccagcgcacc cgcgagcgtg ttgaagcagt gatgaatcag
    26461 catggatttt ccccttcccg ctctgcgcgc gctatgcgtg ggcaaagcga taaagtggtc
    26521 gccatcattg ttacccgtct ggattcgttg tcagaaaatc tcgccgttca aaccatgctg
    26581 ccagcgttct atgaacaagg ttacgaccca atcatgatgg aaagtcagtt ttccccacag
    26641 ttagttgctg aacatttgag ggtgctgaaa cggcgtaata tcgacggcgt agtgctgttc
    26701 ggttttactg gcataacaga agaaatgtta gcccactggc agtcatcgct ggttctgctg
    26761 gcgcgtgacg caaaaggctt tgcttcggtc tgttatgacg acgaaggggc aatcaagatc
    26821 ctgatgcaac ggctgtatga ccaggggcat cgtaatatca gttatctcgg cgtgccgcat
    26881 agtgacgtga caaccggtaa gcgacgtcac gaagcctacc tggcgttctg caaagcgcat
    26941 aaactgcatc ccgttgccgc tctgccaggg cttgctatga agcaaggcta tgagaacgtg
    27001 gcaaaagtga ttacgcctga aactactgcg ttactgtgcg caaccgacac gctggcactt
    27061 ggcgcaagta aatacctgca agagcaacgc atcgacacct tgcaactggc gagcgtcggt
    27121 aatacaccgt taatgaaatt cctccatccg gagatcgtca ccgtagatcc cggttacgcc
    27181 gaagctggac gccaggcggc ctgccagttg atcgcacagg taaccgggcg cagcgaaccg
    27241 caacaaatca tcatctccgc caccctgtcc tgatcgtttc ctgaacgata aattgtgatc
    27301 ttcgctgcgt ttcgggaacg ttcccgtttt taaatttttc cgcgcaatat attctgcagc
    27361 caaccaaaaa tgtcatctgc catggggctt tatgatgagc aaaataaacc aaacggatat
    27421 cgatcggttg attgaactgg tcggcgggcg cggcaatatt gcgacggtga gccactgtat
    27481 tactcgcctg cgctttgtcc tcaaccaacc ggccaatgcc agaccgaaag aaattgagca
    27541 actccccatg gtgaaaggct gtttcaccaa tgccgggcaa tttcaggtgg tgattggcac
    27601 caatgtgggt gattactatc aagcactgat tgcgtcaacc ggacaggcgc aggttgataa
    27661 agagcaggta aaaaaagccg cccggcagaa tatgaaatgg catgagcagt tgatctctca
    27721 tttcgcggag atcttcttcc cgttgctgcc cgcgttgatt agcggtggtt tgatcctcgg
    27781 ttttcgcaat gtgatcggcg atttgcccat gagcaacggt cagacgctgg cgcaaatgta
    27841 cccttccctg caaacgatct acgattttct gtggttgatc ggtgaagtga tcttcttcta
    27901 cctgccggtc ggtatttgct ggtcagcggt gaaaaaaatg ggcggcacgc cgatccttgg
    27961 tatcgtgctt ggcgtgacac tggtttctcc acagctgatg aacgcttatc tgctcgggca
    28021 gcaactgccg gaagtgtggg actttggcat gttcagcatc gccaaagtag gctatcaggc
    28081 gcaggtgatc ccggcactgt tagccggact ggcgctgggc gttattgaaa ctcgccttaa
    28141 acgcatcgtg ccggattacc tctatctggt ggtggtaccc gtctgttcgc tgatcctcgc
    28201 ggtgttcctc gcccatgcgc tgattggtcc gtttggtcgc atgattggcg atggcgttgc
    28261 ctttgcggta cgtcacctga tgaccggcag ctttgctccg attggtgcgg cattgtttgg
    28321 cttcctgtac gcgccgctgg tgatcaccgg cgtacaccag accacccttg ctattgattt
    28381 gcagatgatt caaagcatgg gtggcacgcc agtgtggccg ctgattgcgc tgtcgaatat
    28441 cgctcagggc tccgccgtaa taggcattat catttccagc cgcaagcaca atgagcgcga
    28501 gatctccgtg cctgccgcta tctccgcctg gcttggggtc actgagcctg caatgtacgg
    28561 catcaacctg aaatatcgct tcccgatgct gtgcgcgatg attggttctg atctggcagg
    28621 attgctatgc ggcctgaacg gcgttatggc gaatggtatc ggcgtaggcg gcctgccggg
    28681 aattctctcg attcaaccga gctactggca ggtatttgcg ctggcaatgg ctatcgccat
    28741 catcatcccg attgtactca cctcgtttat ctatcagcgg aaataccgcc tgggcacgct
    28801 ggacattgtt taattttctt cggggcgcaa ttgcgccccc tcgcatttgc aggaataacg
    28861 taatgactaa tcttccccac tggtggcaaa acggcgttat ctaccagatt tatccaaaga
    28921 gttttcagga caccacgggt agcggcaccg gcgatttacg tggcgttatc caacgcctgg
    28981 actatctgcg taaactgggc gttgatgcca tctggctaac ccccttttat atctctcccc
    29041 aggtcgataa cggttacgac gtagcgaact atacggcgat tgctcccatc tacggcacgc
    29101 tggacgattt tgacgaactg gtgacgcagg caaaatcgcg cgggattcgt atcattctcg
    29161 atattgtgtt taaccatacc tctacccaac atgcctggtt tcgcgaggcg ctgaacaaag
    29221 aaagccctta ccgccagttt tatatctggc gcgatggcga accagaaacg ccaccgaaca
    29281 actggcgttc aaaatttggc ggtagtgcgt ggcactggca tgcggaaagc gaacagtact
    29341 atttgcatct ctttgcacca gagcaggcgg atctcaactg ggagaatcca gcggtacgcg
    29401 cagagctgaa aaaagtctgt gagttctggg ccgatcgtgg ggtcgacggg ttgcgcctgg
    29461 atgtggtgaa tctgatctcc aaagacccgc gtttccctga agacctggat ggcgacgggc
    29521 gtcgcttcta caccgacggg ccacgagcac acgagttttt gcacgagatg aaccgcgatg
    29581 tgtttacgcc acgcgggtta atgaccgtag gtgaaatgtc ctccaccagc cttgagcatt
    29641 gccagcgata cgcggcactg acaggcagtg aattgtcgat gacctttaat tttcatcacc
    29701 tgaaggtcga ttatcccggt ggtgaaaaat ggacgctggc taaacctgac tttgtggcgt
    29761 tgaaaacatt gttccgccac tggcaacaag gaatgcacaa cgtagcatgg aatgccttgt
    29821 tctggtgtaa ccacgatcag ccgcgcattg tttctcgctt tggtgatgaa ggtgaatacc
    29881 gcgtgcctgc ggcaaaaatg ctggcgatgg tgctgcatgg catgcaggga acgccgtata
    29941 tctaccaggg cgaagagatt ggcatgacca acccgcattt cacgcgcatt actgactatc
    30001 gcgacgtgga gagcctcaat atgtttgccg agctgcgcaa cgatgggcgt gatgccgacg
    30061 agttattggc aatcctcgcc agtaaatccc gtgacaacag tcgcacgccc atgcaatgga
    30121 gcaacggcga taatgccggg tttacggatg gcgaaccgtg gattggcctg ggcgataact
    30181 atcaacaaat caacgtagaa gccgcgctgg ccgatgagtc ctcggtgttt tacacctacc
    30241 aaaagttaat cgcactgcgt aagcaagaag ctgttctgac atggggcaat taccaggatc
    30301 tgctgccaaa cagccctgta ttgtggtgct atcgccgtga atggaagggg caaaccttgc
    30361 tggtcattgc caaccttagc cgtgagatcc aaccctggca gccagagcaa atgcgcggca
    30421 actggcagct tgtgatgcat aactacgaag aagcctcacc acaaccctgt gccatgactt
    30481 tacggccttt tgaggctgtc tggtggttac agaagtaaat cttccctaag ccccggtaat
    30541 gccggtcatt ccggggtttt gtctgtcaac atgttgtttt tgttgatttt tcaaccagca
    30601 aattcattaa aaaatttaca taacgctgta gcgcccgtca tccgtacgct ctgcttttta
    30661 ctttgagcta catcaaaaaa agttcaaaca tccttgatgc aaagcactat atatagactt
    30721 taaaatgcgt cccaacccaa tatgttgtat taatcgacta taattgctac tacagctccc
    30781 cacgaaaaag gtgcggcgtt gtggataagc ggatggcgat tgcggaaagc accggaaaac
    30841 gaaacgaaaa aaccggaaaa cgcctttccc aatttctgtg gataacctgt tcttaaaaat
    30901 atggagcgat catgacaccg catgtgatga aacgagacgg ctgcaaagtg ccgtttaaat
    30961 cagagcgcat caaagaagcg attctgcgtg cagctaaagc agcggaagtc gatgatgccg
    31021 attattgcgc cactgttgct gcggttgtca gcgagcagat gcagggccgc aaccaggtgg
    31081 atatcaatga gatccagacc gctgttgaaa accagctgat gtcaggtcca tacaaacaac
    31141 tggctcgtgc ttacatcgag taccgtcacg atcgcgacat tgaacgtgaa aaacgcggtc
    31201 gcctgaacca ggagatccgt ggtctggtcg agcagaccaa cgcctcgtta ctcaacgaaa
    31261 acgccaacaa agacagcaag gtgattccaa cccagcgcga cctgctggcc gggatcgtgg
    31321 ctaaacacta tgcacgccag cacctgctgc cgcgtgacgt ggtgcaggca catgagcgtg
    31381 gcgatattca ctatcacgat ctcgattact cgccgttctt cccgatgttc aactgcatgt
    31441 tgatcgacct gaaaggcatg ctgacccaag gctttaagat ggggaacgcc gagattgaac
    31501 caccgaagtc gatctctacg gcaaccgcgg taactgcgca gattattgct caggtcgcca
    31561 gccatattta tggtggcacc accattaacc gtatcgatga agtgctggca ccgtttgtca
    31621 ccgccagcta caacaaacat cgcaagaccg cagaagagtg gaacatcccg gacgccgaag
    31681 gctacgctaa ctctcgtacc attaaagagt gctacgatgc cttccagtcg ctggagtacg
    31741 aagtaaacac cctgcacacc gccaacggtc agacgccgtt tgtaaccttt ggttttggtc
    31801 tgggcaccag ctgggaatcg cgcctgattc aggaatcgat cctgcgtaac cgtatcgcag
    31861 gcctcggtaa aaaccgtaaa actgcggtgt tcccgaaact ggtgtttgcg attcgcgatg
    31921 gcctgaacca taaaaaaggc gatccgaact acgacatcaa acagctggcg ctggagtgcg
    31981 caagcaagcg catgtatccg gatatcctga actacgatca ggtagtgaaa gtcaccggtt
    32041 cgtttaaaac cccgatgggc tgccgcagct tcctcggcgt gtgggaaaat gaaaacggcg
    32101 agcagatcca cgatggtcgt aacaacctcg gcgtgatcag cctgaacctg ccgcgtattg
    32161 ctctggaagc aaaaggcgat gaagccgcct tctggaagct gctggatgaa cgactggtgc
    32221 tggcacgtaa ggcgctgatg acccgtatcg ctcgtctcga aggcgtgaaa gcgcgcgtgg
    32281 ccccgatcct ctatatggaa ggtgcttgtg gcgtgcgtct caatgctgac gatgatgttt
    32341 ctgaaatctt caaaaacggt cgtgcgtcta tttcactggg ttacatcggc atccacgaaa
    32401 ccattaacgc gctgttcggc ggcgaacatg tttacgacaa cgagcagctt cgcgcgaaag
    32461 gtatcgcgat tgttgaacgt ctgcgtcagg cagtggatca gtggaaagaa gaaacgggtt
    32521 acggtttcag tctctacagc acgccgagtg aaaacctgtg cgaccgcttc tgccgtctcg
    32581 atactgctga gtttggcgtg gtgccgggcg taacggacaa aggttactac accaacagtt
    32641 tccacctcga tgtggagaag aaggtgaacc cgtacgacaa gatcgacttt gaagcgcctt
    32701 acccgccgct ggcgaacggt ggtttcattt gctacggcga gtatccaaac attcagcaca
    32761 acctgaaggc gctggaagat gtctgggatt acagctatca gcatgtaccg tattacggca
    32821 ccaatacacc gattgatgag tgctacgagt gtggctttac cggtgagttc gagtgcacca
    32881 gcaaaggctt cacttgcccg aaatgtggta accatgacgc ctcccgtgtg tcggtaactc
    32941 gccgcgtgtg cggatattta ggtagcccgg atgcacgtcc gtttaacgct ggtaagcagg
    33001 aagaagttaa gcgccgcgtt aaacatttgg ggaatgggca gataggttaa tcttcactct
    33061 gcgctaagca aatgccggat gcggcgtaaa cgccttatcc ggcctacatt tggcaacggc
    33121 tgtaggcctg ataagacgcg acagcgtcgc atcaggcgtt gattaccgga tgcatcctat
    33181 acgcggactg ataagccagg cgaaacaatg aattatcatc agtactatcc tgtcgacatc
    33241 gtcaacggcc ccggcactcg ctgcaccctg tttgtctccg ggtgtgttca tgaatgctcc
    33301 ggttgctata acaaaagcac ctggcgggta aattccggtc agccatttac caaagcaatg
    33361 gaagaccaga tcattaacga tctgaatgac actcgtatca aacgccaggg tatttcgctt
    33421 tccggcggcg atccgctgca tccacaaaac gtgccggata ttctgaaact ggtacaacgc
    33481 atccgcgccg agtgtccggg taaagacatc tgggtatgga caggctacaa actcgacgaa
    33541 ctcaacgctg cgcaaatgca ggttgttgat ttgattaacg tgctggtcga cggcaaattt
    33601 gtgcaggatt taaaagaccc ttccctgatc tggcgcggca gcagcaatca ggtggtgcat
    33661 catttgcgat gataagttcc ctgttacctg agtgcaggca acagggaaat gaggaattaa
    33721 cgatacttct tgtgatatga attgcgggtc gttttcagtt gctctgcagc agcctgcgct
    33781 tcttttactt taccttcatt tgccagcttc agcgcgtcgt caatctgacc gaccagaata
    33841 tcgaaaccgt gacggaagtc tttcatctcc gggctgtccg gtgatttgcc ttcgagcttc
    33901 ggcggcgttg ctttttgcgc atccagcgct gcggcgcgca tcttcgttaa cgcgtctttg
    33961 acttgcgccg cgttatcggc tttttcgacc acttttaaat tgtcgttgag ggtttccata
    34021 ttgtcttcaa gatcagcggc aaacgacgcc gaactgaata ccaacgagga gaccgcaaga
    34081 atagctaaca ggcttttacg cattgctcac ttcctttttt atttacactt catccttcac
    34141 actacctcat cgacggctac gctcattcgc ccgggtcacg tactacgagt acgctccccg
    34201 gctctcattc actttccgtc tcgatgcagt gcgaatgatt ttgtgtaatt ttttagttta
    34261 tagcgcggca ggtcgcgcca gttttttact gcccggcgat tttcatctcc ggcaacagca
    34321 cagaaccaca ctgtatatta ctgcgtgttt caatatcgtt accgacggtg acaatattgc
    34381 gccacatatc ttttaaatta cctgcgatgg tgatttcgct caccggatac tgaatttcgc
    34441 cattctctac ccagaagccc gctgcaccgc gggaataatc accggtaatg gcactcacgc
    34501 cctggcccat cagctccgtc accaccagcc cggtgcccat ctctttgagc atttgttcga
    34561 agcttagccc ttgtccggca atccgccagt tgtgaatacc gcccgcatgt ccggtgcttt
    34621 tcagccccag tttccgcgcc gagtagctgg tcagcagcca ctgagtcagg atgccatctt
    34681 taataatatc gcgacgctcg gtgcgcacac cttcgctgtc gaatggcgtc gacgccagcc
    34741 ctttcagcag atgcggatgc tcttcaatgg tcagccagtc cggcagaatt tgtttaccca
    34801 gcgaatccag caggaaggta gatttacggt aaaccgatcc acccgctatc gcccccacca
    34861 gatggccaaa aagcccggtt gccacttcat tggcaaaaat gaccggcgct ttcatggtgg
    34921 agagtttacg cggtgacagg cgcgataaag tacggcgagc acagtcggcc ccaacccact
    34981 ctggcgtttg cagatcgctc atcgcacgac caatggtgta ggcgtaatca cgctccatat
    35041 cgccattttc ttcggcaatt acacagttgg agagcgaatg acgcgttgag cagtaaccct
    35101 gcaacatgcc gtggctgttg ccaaaaactt tgacaccgta gtggctgtta aagctgccac
    35161 cttcggtatt ggtgatacgt ttatccgcct gtaatgctgc ctgttctgcg cgggccgcca
    35221 gttcaatggc ttcgtcaggg gaaacttctg ccgggtggaa caagtcgaga tccggtgcgt
    35281 caaaggccag caactctttg tctgccaccc cggcacaggg atcgggcgaa gtgtaccgcg
    35341 caatatccag cgccgcctgc acggtgcggg caatggcctg cgggcttaaa tcggtggatg
    35401 atgcgctacc tttgcggttc tggtgataaa cagtgatccc cagcgcgcca tcgctattga
    35461 attcaacatt ctccacttca ccataacgcg tgcttacgct aatgccggtg gtcttgctga
    35521 cggcaacttc cgcaccgtcc gatttgcctg aggccaactc cagcgcagtg gaaactgctt
    35581 cttccagaat cttgcgctgc gcttcaactt gagagattac tttcattgca agtgccataa
    35641 tgtagagagt ttctctgaag tctaacagag aaccgttttt cagtgcgcat cttaactggt
    35701 aacattagcc tcttttttta aggagcctga gatgactaag cagcccgaag actggctcga
    35761 cgacgttccc ggtgatgaca tcgaagacga agacgatgaa attatctggg tcagtaaaag
    35821 tgaaattaaa cgtgatgccg aggagctaaa acgccttggc gcggaaattg ttgatctggg
    35881 gaaaaacgcg ctggataaga tcccgttaga tgcggatctg cgcgcggcta ttgagctcgc
    35941 ccagcgtatt aagatggaag gtcgccgccg ccagttgcag ctcatcggta agatgctgcg
    36001 ccagcgcgat gttgaaccga tccgtcaggc gctggataag ctgaaaaacc gtcacaacca
    36061 gcaggtggtg ctgttccata aactggaaaa tctgcgcgat cgtctgatcg atcaaggtga
    36121 tgacgccatc gctgaagtat tgaatctgtg gcccgatgcc gatcgtcagc agctgcgtac
    36181 tctgatccgc aatgcgaaga aagagaaaga agggaataag ccgccgaaat ccgcacgcca
    36241 gattttccag tatctgcgcg aactggcgga gcatgaaggg taattttcgt tgttgatgtg
    36301 agaatggttt gccggatgcg gtgcacccgt aggccggata agacgcatca agcgtcgcat
    36361 caggcactat gctcaaatgc cggatgcggc gtaaacgcct tatccggcaa tgctatatca
    36421 ggctgaagcc gaattactgc gcagcttccg ccttcttcgc cagaccatcc agcagtttct
    36481 gatggatccc accaaaaccg ccgttgctca tcaccagaat atggtcgcca ggctgagcgg
    36541 ttttcaccac catatctgcc agcgtatcca catcgccact ccagtgtgca ggctgaacgc
    36601 aggcttctgc cacttctgcc acctgccacg gaatatgcgc cggttgcagc aggaagactt
    36661 catcggcacg acctaatgaa ggtgccagat cgtctttgca gagccccatt ttcatggtat
    36721 tcgagcgcgg ttccagcaca gcaataatgc gcgccgtacc accaactttg ccacgcagcg
    36781 ccgcaagcgt tgccagaatc gccgtcgggt gatgggcaaa atcgtcatat accgtgacgc
    36841 cattcgcttc accacgcaac tccagacggc gacgagcatt aataaacgaa cccagcgcgt
    36901 tagcggcatc tgccggcgct acaccaacat ggcgagccgc tgcaatcgcc atcagtccat
    36961 tgtgcatatt atgttcgcct accagcgacc atttcacttc gcccactttt tcgccatcca
    37021 gcaagacttc ccattcagaa gcgtcagtgg tcagcttttt cgcctgccag tgaccttgct
    37081 cgcccaccag ctcctgctcg ctccagcagc ccatcgccat ggtctgtttc aggttgatgt
    37141 cgttttccgg ccagataata cggccctgcc ccggaacgat acgcaccaga tggtggaact
    37201 gtttctggat cgctttcagg tcgtcaaaga tatcggcgtg atcgaactca aggttgttga
    37261 ggatcagcgt acgcgggcag taatggacaa atttagagcg tttgtcgaag aaggcgcagt
    37321 catactcatc cgcttcgata acaaagaagt cgctttcgcc cagacgcgcc gaaacctcaa
    37381 agttccccgg cacaccgccg atcacaaatc ccggtttgta accgcactgt tccagaatcc
    37441 aggttgccat tcccgcggtg gtggttttgc catgtgtacc ggcaacggcc agcacccagc
    37501 ggtcacgcag cacaaaatcg tgcagccact gtggacctga catataaggg atgttttttt
    37561 ccagtaccgc ttccacacac ggatttccac gggtcatggc gttgccaata atcaccagat
    37621 ccggctgcgg atcgagctgg ctggcatcgt aaccctgaat cagttcaatg ccttgcttct
    37681 caagtaaggt gctcatcggc ggatacacat tggcgtccga acccgttact tcatggccta
    37741 actggcgcgc cagcatcgcc agaccgccca taaacgtgcc acaaattcct aaaatatgaa
    37801 tgcgcatgcg tcactatcct tttttaatct gccgctcatt ttacgcatat gtcgggcaag
    37861 tgagaaacgc atttcaggat agctggcgcg attcacctga gcgcaacatt ccgattattt
    37921 gttaagattg ttacggtcgc tttactccat aaacattgca gggaaagttt tatgaaaacg
    37981 ttaggtgaat ttattgtcga aaagcagcac gagttttctc atgctaccgg tgagctcact
    38041 gctttgctgt cggcaataaa actgggcgcc aagattatcc atcgcgatat caacaaagca
    38101 ggactggttg atatcctggg tgccagcggt gctgagaacg tgcagggcga ggttcagcaa
    38161 aaactcgact tgttcgctaa tgaaaaactg aaagccgcac tgaaagcacg cgatatcgtt
    38221 gcgggcattg cctctgaaga agaagatgag attgtcgtct ttgaaggctg tgaacacgca
    38281 aaatacgtgg tgctgatgga ccccctggat ggctcgtcca acatcgatgt taacgtctct
    38341 gtcggtacca ttttctccat ctaccgccgc gttacgcctg ttggcacgcc tgtaacggaa
    38401 gaagatttcc tccagcctgg taacaaacaa gttgcggcag gttacgtggt atacggctcc
    38461 tctaccatgc tggtttacac taccggatgc ggtgttcacg cctttactta tgatccttcg
    38521 ctgggcgttt tctgcctgtg ccaggaacgg atgcgcttcc cggagaaagg caaaacctac
    38581 tccatcaacg aaggaaacta cattaagttt ccgaacgggg tgaagaagta cattaaattc
    38641 tgccaggaag aagataaatc caccaatcgc ccgtatacct cgcgttatat cggttcactg
    38701 gttgcggatt tccaccgtaa cctgctgaaa ggcggtattt atctctaccc aagcaccgcc
    38761 agccacccgg acggcaaact gcgtttgctt tatgagtgca acccgatggc attcctggcg
    38821 gaacaagcgg gcggtaaagc gagcgatggc aaagagcgta ttctggatat catcccggaa
    38881 actctgcacc agcgccgttc gttctttgtc ggcaacgacc atatggttga agatgtcgaa
    38941 cgctttatcc gtgagttccc ggacgcgtaa tctcctgcgc ctctccacac ggagaggcat
    39001 ttttatcgct gcgcaatgtt gactcttgtc actggcgaac tctgacgatt ctcccacagc
    39061 accgttaacc cacgctgtaa tgctataaaa ataaacaaca aaataccgat ggcgattttc
    39121 gtccaccagg aactcagcgt gccgtcaaag ttgatgtaag tctggatcag tccctgaatt
    39181 gccacgccaa aaagcgtccc aagcaccgtc ccgacgccac cacttaacaa cgtaccgcca
    39241 atcaccaccg acgcgatggc gtccagttcc acacctacgc ccgccagtgc atatccggcc
    39301 tgggtataaa tcgagaagac aatccccgcc agtgttgcca gtccggtgga gagcatataa
    39361 atgcgaatag tggtgctgcg agtagaaatc cccatcaggt tcgccgacgt cgcgttgccg
    39421 ccaatagcgt acacctgatt gccaaaacgg gtacgatgcg caaggaaaat accgataacc
    39481 accaccgcca gcatcaacag ccccatcgca ctaaggcgac cgccgccggg gattttccac
    39541 gcaaggcttg agagcgtatc ataaatggga tggttaattg gaatcgactc ttctgagatg
    39601 agatagctga cgccgcgcaa aaagaacatc cccgcaagcg taatgatgaa cgccgggatc
    39661 ttcatcgcgt cgatcaaaag ccccataaat gcgccgaagg cacagcccat caccagcacc
    39721 agcggaaacg ccagcagcgg tgagagaccg aaatcgccaa tcacttttgc cagaaacacg
    39781 ccggtaaagg cgatcaccga accgacggag agatcgatcc caccggagag gatcacaaag
    39841 gtcatgccaa cggcaatgat cccaagaaag gcgttatcgg tcaggatatt gcagatcact
    39901 cttgtggaag caaaaccagg aaactgcgtc aggcagtaga gatagcccag cacaaagacg
    39961 ccgatggtga tcataagcgg caagttacgt tttatcacgg ctacgcactc ctttaatcag
    40021 actgataaag cgttgcgact ggacaatcag cacgcaaaga accaccaccg cttttacaac
    40081 ctggttcatc tctggcggaa agcccgaaag caaaattccg gtgttcatcc cctgaataat
    40141 cagcgccccc accaccgaaa gcagtaggtt aaaacgtccg cccatcagcg atccgccgcc
    40201 aatcaccacc gcgagaatgg cgtccagctc cagccataat ccggcgttgt tggcatcggc
    40261 accgcgaata tccgccgcca cgataatgcc cgcaatcgcc gcacatagcc cgctcaacac
    40321 gtaggtgagc atgacgatga ttcgcgtgtt taccccggca ttttttgccg cccgaatgtt
    40381 gataccaacg gcttcgataa acatccccag tgccgttttg cgggtcaaca gccagaacag
    40441 gagaagcgtc agtaccgcaa taatgactga cgttggcagg aacaacagcg atccactgcc
    40501 aaaccatgag agatccggcg agttaaacgt gacgatctgt ccggaggtga tcagttgcgc
    40561 cacgccgcgc ccggcgacca tcaggatcag ggtggcgaca aatggctgaa ttttgaggat
    40621 cgctaccagt atgccgttcc acaatcccgc caggatgccg gtgcccaggg cgcttaacaa
    40681 aacaatcggc aggctgactc ccgcgaccgt catcgcagcc gttgtggctc cggcgatagc
    40741 catcaccgcc cctacggaga gatcaatccc accggtggcg atcaccagcg tcataccaat
    40801 cgccagtaac gcaacgggtg ctgcacggtt aagaatgtct atggggctac cgaacaaacg
    40861 cccatcctga agcactacct gccagaaatg cggggctacc aggctgtcga ccagcagcac
    40921 cagcaatagt gctaccagct gcggcatccc cgtcggccag cgaaagcgcc tttttggcgt
    40981 agtggtgtcc ggaagagatt gaggcatcac actgttctcc ttacgccgca atggcgttca
    41041 tgatcgccgg aacggaaagc tctgccagcg ggatctccgc cacctgtttg cgatcgcgca
    41101 tgatgatcac ccggtcggca tagcccacca gttcttccag ttcggaggag atcaccagca
    41161 gcgccagacc atcggcgcat agcgtttcaa tcaggcggat gatctcggcg tgggcaccaa
    41221 catcaatgcc acgggttggc tcatcgagga tcagaaattg cggtcgggtc agtagccaac
    41281 gtgaaagcaa cactttttgc tgattgccgc cggagagaaa ttcaatcggt tgttcagttg
    41341 aaggtgtgcg aatgccaagc tggcggataa agcgttcggc aatctcttgc tgctctttgc
    41401 gggaaatggg tcgtagccag ccgcgctggg cctggagagc gaggatgata ttttcccgca
    41461 ccgaggcggc agcgatgatg ccatcggttt tcctgtcttc cgggcagaag ccaatgccca
    41521 gtaccgacgc ctgatgtgac gatcgcaggg tttgcggttt gcctttgatc aacgccgtgc
    41581 cgctgtcagc aggtttgata ccgaagatca cttcggcggt ttcggtacgt cctgatccca
    41641 gcaagcctgc caggccgacg atctctccgg ggcgcacttc gagatcaaac ggtgcgatcg
    41701 ttcctttttt gccgtaattt ttgaacgcgg caacgggttt gtcgctcaac aatgttcgcc
    41761 cggcacgctg tagcgcgtgg gtatccagct cgcgccccag catcattttt accagttcga
    41821 tctgcggtag ctagcgcgtt tcccgacagc ctacgaaact gccgttgcgt aagacagtga
    41881 tccgatcgct gacctgatag acctgatcga gaaagtgagt gacaaagatc aggctgacgc
    41941 cgcgatcgcg caactgacgc atcaggccaa ataatagctc cacttcctgg gtgtcgaggc
    42001 tggcggtggg ttcatcgagg atcagcactt tggcggagag atcgatagcc cggcaaatgg
    42061 cgacgatttg ctgcatcgcg actgaaaagc ggttaagcgg ttcgcgcacg tcgaggaaga
    42121 aaccgtaaga tgccatcagt tcggtggcgc gcttttccat ctctttacgg cgtagaaggc
    42181 cgaaacgttt gggttcgcga cctatgaata gattatcagc gaccgacata ttgggtagca
    42241 ggttgacttc ctgatagacg gtgccgatgc ctagttgttg tgcatgggcg gtatttttcg
    42301 gtgagatagc ctggccttcc agccagatgg tgccgcgatc ggcgtggtat acaccggtta
    42361 atgctttgat tagcgttgat tttcccgccc cgttttcacc gagcagcgcc atgatttcgc
    42421 cacggcgcag gctgaaatca acgttgtcta acgctttgac gccggggaaa aatttactta
    42481 atccttcggt gcggaggatt tcctggtgtt ggtcggtcgt catggtttcc cccggtgtaa
    42541 agcgtgctcc cagtaggcat gataagacgc ggtaagcgtc gcatcaggct tcagcgcacc
    42601 accgccggat gcggcgcgag cgccttatct ggcctacgaa tcggcatcag gcatcgatgc
    42661 ccctcaatac cccatatttt tcttcttctc taactcttct tttgcggtat caggcagata
    42721 aaggggggat ttggtcaggg tcagcttttc aggcatggtg ccgtcttttt tgtatttctc
    42781 cagcgcatcg aaagcgggac ctgccatgtt cggcgtcaat tcaacgctgg cgttcacctc
    42841 gccatcaatc atcgctttgt agatgtccgg tacaccgtca atggaacccg taagaatatc
    42901 tttgcctggt ttcaggcccg cttctttaat tgcctgaatt gcgccaatca ccatgtcatc
    42961 gttatgggcg taaaccatgc agatgttttt gccgttgttt tccgctttga taaagctctc
    43021 catgacttct ttgcctttac tgcgggtgaa gtcacctgac tgcgagcgga taattttgat
    43081 atttggcgca ttcttaatgg cttcggcaaa gcctttctta cggtcaatgg cgacgctggc
    43141 cccaacggtg ccctgcagct ccaccacgtt gcatggtttg ccattcactt cttttaccag
    43201 ccagtcaccg atcaacttac cttcgaggat gttgtcggca gtaacggtgg tcatatagag
    43261 agatttgtct ttcacatcga tggaacggtc gagcaagaag accgggattt cggcatcttt
    43321 cgcctctttt aataccggtt cccaacctgt cgcgaccacc ggagcgataa agatcgcatc
    43381 caccccttgt gcaacgaagg aacgtaccgc tttaatctgg ttttcctgct tttgctgacc
    43441 atcggcaatt ttcaacgtga ttccgcgctt ttcggcttca cttttcgcca cattggtttc
    43501 tgcggcgcgc cagccggatt ccgatccgac ctgcgaaaat ccaacggtta atggagcggc
    43561 caacgccata gacgacatgg ctgccgagac tgcagagact acaagtaagc gtttccacat
    43621 agggttgtcc tcgtcggggt aattattatt ggttaaaaga tgttcgcgaa aaaactatag
    43681 acaatcggtg atgtaacgaa ttgcgttaca tcacacttca aaaaagtaaa taaaacgtta
    43741 atcacaagtt tgtaatcgct ttcatctcac tatgaaaaat gcggctacgg ttatggattt
    43801 tcctgctctg tataccgtct taaaactggt gaaaaaggaa aatgaagacg aaaacaagcg
    43861 aagacattcg gcgcgagttg gctataatac tcggcacttg tttgccacat atttttaaag
    43921 gaaacagaca tgagcttact caacgtccct gcgggtaaag atctgccgga agacatctac
    43981 gttgttattg agatcccggc taacgcagat ccgatcaaat acgaaatcga caaagagagc
    44041 ggcgcactgt tcgttgaccg cttcatgtcc accgcgatgt tctatccgtg caactacggt
    44101 tacatcaacc acaccctgtc tctggacggt gacccggttg acgtactggt cccgactcca
    44161 tacccgctgc agccgggttc tgtgatccgt tgccgtccgg ttggcgttct gaaaatgacc
    44221 gacgaagccg gtgaagatgc gaaactgatt gctgttccgc acaccaagct gagcaaagaa
    44281 tacgatcaca ttaaagacgt taacgatctg ccagagctgc tgaaagcgca gatcgctcac
    44341 ttcttcgagc actacaaaga cctcgaaaaa ggcaagtggg tgaaagttga aggttgggaa
    44401 aacgcagaag ccgctaaagc tgaaatcgtt gcctccttcg agcgcgcaaa gaataaataa
    44461 gttcttatag cgcaataacc ctgaacaccg ggcttcggtt agtaagggtt tttttatgcc
    44521 cgcgataaat aaacacacct tattccacca ccgcctgcaa gcgtaataac gcctcttcca
    44581 ccacctcatc cgcagccaga ccaatacgct ttgccagccg ggcgcgtaga tccatcatcc
    44641 gcacctgatt caccagcacc acgccgtgca catcgccttc ttcgcaatgt aaaggaacgc
    44701 taaatccggc ataacgggca aaatttccgc cctgcgtaat gggggccacc agcgtcattc
    44761 ccagttgatt aaaggcttga acggagagca caagcgcagg tcgaccagca ccttgctgtt
    44821 catggccgct tgctggatca aagccaacca gcacaatgtc tccccgttca aattcacttt
    44881 tctttaccat atttcgtcac ccgcaggggt ggatttaccc cagacatcct gctcgctaag
    44941 ttccgcggcg ttcatgtcac actgtgccag cagttcatca agcgagtagc gcctggagat
    45001 gggtgtcaga atcagttggt tgttgctcac ctgcgcttcc acgctctgcc ccggctgtaa
    45061 gttaagttct ttcattacga tattgggaat gaccatacct gcactgttcc cccatctttt
    45121 tatggtaata cgcatctgca cctccttaag ttatacaaag tataactcac ggtgctacag
    45181 gaaacgtttt acccctgcgc atttgtgaat gccagcagag ttttttatgc gttaatagat
    45241 atggaaagcg gctcggagag aaaagcaaaa ggtgagggaa ttacaaaaca gaatgcgagt
    45301 cgtctcgcaa aaaa
//
LOCUS       DAJVTL010000018        45094 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.018, whole genome shotgun sequence.
ACCESSION   DAJVTL010000018 DAJVTL010000000
VERSION     DAJVTL010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 45094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45094
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.018"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(267..884)
                     /gene="tdk"
                     /locus_tag="OQQ26_000954"
     CDS             complement(267..884)
                     /gene="tdk"
                     /locus_tag="OQQ26_000954"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HCS1856498.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAQHEQQAIHCVLVDECQFLTRQQVYELSE
                     VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
                     GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVDSLTAIQERHRHD"
     gene            1488..1901
                     /gene="hns"
                     /locus_tag="OQQ26_000955"
     CDS             1488..1901
                     /gene="hns"
                     /locus_tag="OQQ26_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HCS1856499.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
     gene            complement(2044..2952)
                     /gene="galU"
                     /locus_tag="OQQ26_000956"
     CDS             complement(2044..2952)
                     /gene="galU"
                     /locus_tag="OQQ26_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HCS1856500.1"
                     /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNTLGTEFKAWLEEEMGIKK"
     gene            complement(3154..4167)
                     /gene="rssB"
                     /locus_tag="OQQ26_000957"
     CDS             complement(3154..4167)
                     /gene="rssB"
                     /locus_tag="OQQ26_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HCS1856501.1"
                     /translation="MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDAL
                     ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQEL
                     QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
                     LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
                     LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
                     SAE"
     gene            complement(4259..5164)
                     /gene="rssA"
                     /locus_tag="OQQ26_000958"
     CDS             complement(4259..5164)
                     /gene="rssA"
                     /locus_tag="OQQ26_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HCS1856502.1"
                     /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
                     LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEI
                     ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
                     PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLG
                     SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
                     AAIAAGQLAVEKKMDELLPLVRTNI"
     gene            5277..5735
                     /locus_tag="OQQ26_000959"
     CDS             5277..5735
                     /locus_tag="OQQ26_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HCS1856503.1"
                     /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
                     DADYLIKTWHPSCGTAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
                     GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
     gene            5785..6627
                     /gene="purU"
                     /locus_tag="OQQ26_000960"
     CDS             5785..6627
                     /gene="purU"
                     /locus_tag="OQQ26_000960"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HCS1856504.1"
                     /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQ
                     PDYVVLAKYMRVLMPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
                     TIIL"
     gene            6788..6872
                     /locus_tag="OQQ26_000961"
     tRNA            6788..6872
                     /locus_tag="OQQ26_000961"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6822..6824,aa:Tyr,seq:gta)
     gene            6919..7050
                     /locus_tag="OQQ26_000962"
     ncRNA           6919..7050
                     /ncRNA_class="other"
                     /locus_tag="OQQ26_000962"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(7234..7911)
                     /gene="narI"
                     /locus_tag="OQQ26_000963"
     CDS             complement(7234..7911)
                     /gene="narI"
                     /locus_tag="OQQ26_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HCS1856505.1"
                     /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
                     IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QLVRARH"
     gene            complement(7911..8621)
                     /gene="narJ"
                     /locus_tag="OQQ26_000964"
     CDS             complement(7911..8621)
                     /gene="narJ"
                     /locus_tag="OQQ26_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HCS1856506.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEYAHALG
                     IFLRDLTTMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
                     LQLNSRELPDHLPLYLEYLAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDL
                     LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            complement(8618..10156)
                     /gene="narH"
                     /locus_tag="OQQ26_000965"
     CDS             complement(8618..10156)
                     /gene="narH"
                     /locus_tag="OQQ26_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HCS1856507.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
                     ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
                     PFDFDYQNLHTAPEGSKAQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
                     FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
                     GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
                     ADAIERAASTENEKDLYQRQLDVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
                     MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN
                     LLTAGDTKPVLRALRRMLAMRHYKRAETVDGKVDIRALEEVGLTEAQAQEMYRYLAIA
                     NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
                     EPHP"
     gene            complement(10153..13896)
                     /locus_tag="OQQ26_000966"
     CDS             complement(10153..13896)
                     /locus_tag="OQQ26_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HCS1856508.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQVRGRGGFVR
                     SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
                     VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
                     EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
                     CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
                     TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
                     YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
                     GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
                     NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD
                     SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGG
                     KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
                     AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
                     HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVMGQKSNGNPEKALN
                     FLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKELGIADNDWIEVFNSNGALT
                     ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAH
                     LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK"
     gene            complement(14412..15803)
                     /gene="narK"
                     /locus_tag="OQQ26_000967"
     CDS             complement(14412..15803)
                     /gene="narK"
                     /locus_tag="OQQ26_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HCS1856509.1"
                     /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
                     RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
                     WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
                     LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKK"
     gene            16142..17938
                     /gene="narX"
                     /locus_tag="OQQ26_000968"
     CDS             16142..17938
                     /gene="narX"
                     /locus_tag="OQQ26_000968"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HCS1856510.1"
                     /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGL
                     QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
                     VFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
                     MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
                     NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
                     ADSHTQYGILLATLPQGRHLSHDQQQLLDTLVEQLTATLALDRHQERQQQLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPASSRELLSQIRNELNASWAQLRELLT
                     TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
                     NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
                     CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
     gene            17931..18581
                     /gene="narL"
                     /locus_tag="OQQ26_000969"
     CDS             17931..18581
                     /gene="narL"
                     /locus_tag="OQQ26_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HCS1856511.1"
                     /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
                     IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
     gene            complement(18582..19976)
                     /gene="ychO"
                     /locus_tag="OQQ26_000970"
     CDS             complement(18582..19976)
                     /gene="ychO"
                     /locus_tag="OQQ26_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415738.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter invasin YchO"
                     /protein_id="HCS1856512.1"
                     /translation="MSRFVPRIIPFYLLLLAAGGTANAQSTFEQKAANPFDNNNDGLP
                     DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV
                     ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDDGLVSNV
                     GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQT
                     ATQEQRMARGYDLTARMRMPFYQHLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGL
                     NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY
                     DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ
                     ILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSMVVEDNQGQRVSSNEITLTLVE
                     PFDALSNDELRWEP"
     gene            20162..20515
                     /gene="ychN"
                     /locus_tag="OQQ26_000971"
     CDS             20162..20515
                     /gene="ychN"
                     /locus_tag="OQQ26_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/F sulfur relay family protein YchN"
                     /protein_id="HCS1856513.1"
                     /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
                     AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
                     ELAQWTLSADKVLTF"
     gene            complement(20559..21254)
                     /gene="chaC"
                     /locus_tag="OQQ26_000972"
     CDS             complement(20559..21254)
                     /gene="chaC"
                     /locus_tag="OQQ26_000972"
                     /EC_number="4.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-specific
                     gamma-glutamylcyclotransferase"
                     /protein_id="HCS1856514.1"
                     /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE
                     GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG
                     RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHP
                     EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA
                     ENYSDGVLRPGFA"
     gene            complement(21412..21642)
                     /gene="chaB"
                     /locus_tag="OQQ26_000973"
     CDS             complement(21412..21642)
                     /gene="chaB"
                     /locus_tag="OQQ26_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HCS1856515.1"
                     /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRD
                     DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
     gene            21912..23012
                     /gene="chaA"
                     /locus_tag="OQQ26_000974"
     CDS             21912..23012
                     /gene="chaA"
                     /locus_tag="OQQ26_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HCS1856516.1"
                     /translation="MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINL
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH
                     SSVWHAIWLIIHLIAVIAVTKMNASPLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
     gene            23417..23524
                     /locus_tag="OQQ26_000975"
     CDS             23417..23524
                     /locus_tag="OQQ26_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small toxic polypeptide LdrA/LdrC"
                     /protein_id="HCS1856517.1"
                     /translation="MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK"
     gene            complement(23673..24527)
                     /gene="kdsA"
                     /locus_tag="OQQ26_000976"
     CDS             complement(23673..24527)
                     /gene="kdsA"
                     /locus_tag="OQQ26_000976"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HCS1856518.1"
                     /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
                     EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
                     AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
                     FEELDTSK"
     gene            complement(24563..25372)
                     /locus_tag="OQQ26_000977"
     CDS             complement(24563..25372)
                     /locus_tag="OQQ26_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HCS1856519.1"
                     /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
                     AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG
                     AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
                     SPSAELFYEDLDEADNIEVIRTLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
                     RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH"
     gene            complement(25376..25768)
                     /locus_tag="OQQ26_000978"
     CDS             complement(25376..25768)
                     /locus_tag="OQQ26_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HCS1856520.1"
                     /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
                     PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
                     ARIIAFPLALVVLYIIIKLATTKVPLLG"
     gene            complement(25765..26598)
                     /gene="prmC"
                     /locus_tag="OQQ26_000979"
     CDS             complement(25765..26598)
                     /gene="prmC"
                     /locus_tag="OQQ26_000979"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HCS1856521.1"
                     /translation="MDYQHWLRDAINQLQGSESPRRDAEILLEYVTGRGRTFVLAFGE
                     TQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWSLPLFVSPATLIPRPDTECLVEQA
                     LERLPEQPCRILDLGTGTGAIALALASERPDCEITAVDRMPDAVALAQRNAQHLAIKN
                     IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
                     HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
                     Q"
     gene            complement(26598..27680)
                     /gene="prfA"
                     /locus_tag="OQQ26_000980"
     CDS             complement(26598..27680)
                     /gene="prfA"
                     /locus_tag="OQQ26_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HCS1856522.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
                     LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
                     EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
                     PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
                     RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
                     GKLDMLIEPIIQEHQADQLAALSEQE"
     gene            complement(27722..28978)
                     /gene="hemA"
                     /locus_tag="OQQ26_000981"
     CDS             complement(27722..28978)
                     /gene="hemA"
                     /locus_tag="OQQ26_000981"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041689438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HCS1856523.1"
                     /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMS
                     WLRAQSASETIREYRSQAEHIRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
                     TKSLQQAARDGDNERLNILRDSLGLE"
     gene            29192..29815
                     /gene="lolB"
                     /locus_tag="OQQ26_000982"
     CDS             29192..29815
                     /gene="lolB"
                     /locus_tag="OQQ26_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HCS1856524.1"
                     /translation="MPLPDFRLIRLLPLASLVLTACTITSPKGPGKSPDSPQWRQHQQ
                     DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYLLSEI
                     TYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK"
     gene            29815..30666
                     /gene="ispE"
                     /locus_tag="OQQ26_000983"
     CDS             29815..30666
                     /gene="ispE"
                     /locus_tag="OQQ26_000983"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HCS1856525.1"
                     /translation="MRTQWPSPAKLNLFLYITDQRADGYHTLQTLFQFLDYGDTISIE
                     LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGADISIDKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
                     FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
                     PLHRAML"
     gene            30817..31764
                     /gene="prs"
                     /locus_tag="OQQ26_000984"
     CDS             30817..31764
                     /gene="prs"
                     /locus_tag="OQQ26_000984"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HCS1856526.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            31889..33568
                     /gene="dauA"
                     /locus_tag="OQQ26_000985"
     CDS             31889..33568
                     /gene="dauA"
                     /locus_tag="OQQ26_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HCS1856527.1"
                     /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTAVVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGL
                     AGLLVATLLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLELPWDLPNSEFTLTWDSIR
                     TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA
                     AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE
                     AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP
                     VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF
                     QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL"
     gene            complement(33623..33901)
                     /gene="ychH"
                     /locus_tag="OQQ26_000986"
     CDS             complement(33623..33901)
                     /gene="ychH"
                     /locus_tag="OQQ26_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HCS1856528.1"
                     /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
                     GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
     gene            34179..34763
                     /gene="pth"
                     /locus_tag="OQQ26_000987"
     CDS             34179..34763
                     /gene="pth"
                     /locus_tag="OQQ26_000987"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HCS1856529.1"
                     /translation="MTIKLIVGLANPGAEYAATRHNTGAWFVDLLAERLRAPLREEAK
                     FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
                     AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
     gene            34880..35971
                     /gene="ychF"
                     /locus_tag="OQQ26_000988"
     CDS             34880..35971
                     /gene="ychF"
                     /locus_tag="OQQ26_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HCS1856530.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
     gene            36816..39701
                     /locus_tag="OQQ26_000989"
     CDS             36816..39701
                     /locus_tag="OQQ26_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pertactin family autotransporter"
                     /protein_id="HCS1856531.1"
                     /translation="MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLL
                     IAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVND
                     ASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDG
                     IIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNN
                     ANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVST
                     NALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDATINFSGTAAQRNS
                     IFSGGSYGASAQTATAVINMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGA
                     KGIYAMTNSQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKG
                     GLINLDMHPGSVWTGSSLSDNFNGGKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFAS
                     YGSTAGTLTTLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNHVLAIRN
                     QGSEATTGNEVLTVVKNTDGAASFSASSQVELGGYLYDVRKNGTNWELYASGTIPEPT
                     PNPEPTPAPAQPPIVNPDPTPEPNPTPTPTPAPKPTTTADAGGNYLNVGYLLNYVENR
                     TLMQRMGDLRNQSKNGDIWLRSYGGSLDSFASGKLSGFDMGYSGIQFGGDKRLSDVMP
                     LYVGLYIGSTHASPDYNGGDGTARSDYMGMYASYMAHNGFYSDLVVKASRQKNSFHVL
                     DSQNNGVNANGTANGLSISLEAGQRFNLTPTGYGFYIEPQTQLTYSHQNEMAMKASNG
                     LNIHLNHYESLLGRASMILGYDITAGNSQLNIYVKTGAIREFSGDTEYLLNNSREKYS
                     FKGNGWNNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF"
     gene            complement(39801..41720)
                     /gene="dhaR"
                     /locus_tag="OQQ26_000990"
                     /pseudo
     CDS             complement(39801..41720)
                     /gene="dhaR"
                     /locus_tag="OQQ26_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415719.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase operon
                     transcriptional regulator DhaR"
     gene            41948..43018
                     /gene="dhaK"
                     /locus_tag="OQQ26_000991"
     CDS             41948..43018
                     /gene="dhaK"
                     /locus_tag="OQQ26_000991"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415718.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HCS1856532.1"
                     /translation="MKKLINDVRDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG
                     KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQIDGGEGVLLI
                     IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV
                     GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH
                     GEPGIDRRPFSSLDQTVDEMFDTLLENGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD
                     RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK
                     VDDETLALWDAPVHTPALNWGK"
     gene            43029..43661
                     /gene="dhaL"
                     /locus_tag="OQQ26_000992"
     CDS             43029..43661
                     /gene="dhaL"
                     /locus_tag="OQQ26_000992"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HCS1856533.1"
                     /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR
                     GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
                     LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS
                     IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
     gene            43672..45090
                     /gene="dhaM"
                     /locus_tag="OQQ26_000993"
     CDS             43672..45090
                     /gene="dhaM"
                     /locus_tag="OQQ26_000993"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaM"
                     /protein_id="HCS1856534.1"
                     /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
                     IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVE
                     GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPPYDEEARSLAV
                     VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
                     AKGPEAEEALIAFRQLAEDNFGEMEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTL
                     TVEEEQERLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASEL
                     LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
                     FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
                     YAIQPEETLTLDVKTQRFNRQG"
BASE COUNT        11274 a        11608 c        11095 g        11117 t
ORIGIN      
        1 ctggggccgt ttttttgttt acccaaagca acttttccat aaaccgacag cattagcctt
       61 catcatattt gcgacgatgt ataacgccta aacacaggga tattgtactt tacaggtcac
      121 aagtcaacgt cggtgcttaa gagccctgtg aggcgtatag cggcgttaaa aaactgccga
      181 gaagggtgta tagcccggaa gaagtgcgta aaacgaactg acaggataaa agcgccctcc
      241 tcaccctgtc agtaaagaaa ttcttattaa tcgtggcgat gcctttcctg aatagccgtt
      301 aatgagtcga cttgtaacgc ctctttatag tgtttacggc atacagaaac gtatcgttca
      361 ttaccaccaa taaccacctg ctcaccttcg ttataaggtc tgcctgcttg atcaagacgc
      421 agcaccatgc ttgctttacg gccacaaaaa cagatggttt ttaattcaac cagtttgtcg
      481 gaccatgcca gtaagtattg gctgccaata aataattcac ctcgaaaatc ggtacgtaaa
      541 ccataacaaa gtacgggtat atcgagttga tcgacaacct ccgataattc atatacttgt
      601 tgtctggtta aaaactggca ttcatcaacc agtacgcaat gaattgcctg ctgttcatgt
      661 tgcgcgcgaa tctcatcaaa taatgatgaa ttttggttaa ataattttgc aggcgatgac
      721 aaacctatac gcgaactgac tttcccggca ccaaagcgat catcaatttc tgccgtatat
      781 acgacagtgc gcatgccgcg ttcctgataa ttgtatgaag attgcaacaa tgctgtagac
      841 ttacccgcat tcattgcgga atagtagaaa tatagctgtg ccatcagcca caggccctca
      901 atgatatgaa ataaagttgg ctggagttta tcataattcg tcagtttttc agctcaacag
      961 tatgcacaga agtggtatat gcgttctccc ttacgaagcc ttgcataatc cttctgagct
     1021 atcattacaa ctgcctcgct tgttataagc ggataaatga ctgctggtaa ctattcacaa
     1081 tctttaacct gttgcgcaag taatagccct ctgttgacct ccaggagata gtgcaatact
     1141 aagtccctgc tcttattgcg actgttctac ttttcatcat tcgcttaata gggaattctc
     1201 gtaaacacga ctaatacaga agactgaaag gtcgtcagcc tacgataatc tccccataaa
     1261 atgtgacatg aatcaggaag ttttaacctc acgtgctgcg aaatcatcgg tgcaaatagg
     1321 gctatatgcc gcgtcttttc tggctaattt tatgaaaaga tatttattgg cgacacaaaa
     1381 taaagaacaa ttttgaattc cttacattcc tggctattgc acaactgaat ttaaggctct
     1441 attattacct caacaaacca ccccaatata agtttgagat tactacaatg agcgaagcac
     1501 ttaaaattct gaacaacatc cgtactcttc gtgcgcaggc aagagaatgt acacttgaaa
     1561 cgctggaaga aatgctggaa aaattagaag ttgttgttaa cgaacgtcgc gaagaagaaa
     1621 gcgcggctgc tgctgaagtt gaagagcgca ctcgtaaact gcagcaatat cgcgaaatgc
     1681 tgatcgctga cggtattgac ccgaacgaac tgctgaatag ccttgctgcc gttaaatctg
     1741 gcaccaaagc taaacgtgct cagcgtccgg caaaatatag ctacgttgac gaaaacggcg
     1801 aaactaaaac ctggactggc cagggccgta ctccagctgt aatcaaaaaa gcaatggatg
     1861 agcaaggtaa atccctcgac gatttcctga tcaagcaata atcttttgta gattgcactt
     1921 gcttaaaatc ccgccatcgg cgggattttt tattgtccgg tttaagacaa tttaataaga
     1981 ataagctata aaaaacggcg tcgattgctc aacgccgttt cgtggataac accgatacgg
     2041 atgttacttc ttaatgccca tctcttcttc aagccaggct ttaaattccg tgccaagggt
     2101 gttatgacga ataccgtatt caacgaaggc ctgcatgtaa cctaatttat taccgcagtc
     2161 atggctcttc cctttcatat gataggcttc aaccgtttct ttttcgatca gcatatcaat
     2221 tgcgtcggtg agctgaattt catcaccagc tcccggaggg gtttttgcca gcaacggcca
     2281 aatatccgcg ctaagtacgt aacgacccac aatagcgaga ttagacggcg caacatccgc
     2341 tttcggtttt tctaccacac caaccatcgg tacgctttca cccggcgcta attcaacgcc
     2401 tttgcaatcc acaacgccat atgcggtcac atcagcaacc ggttcaacca tgatctggct
     2461 atgacccgtt tcatcaaagc ggcggatcat ctctgccagg ttatcctgtg acaaatcgga
     2521 ttcatattca tccagaataa cgtcaggcaa aataacagcc acaggttcat cacccactac
     2581 cgggtgagca cacaataccg cgtgtcccag gcctttagcc agcccctgac gaacttgcat
     2641 aatagttacg tgcggcggac aaatagactg cacttcatca agcagttggc gttttacacg
     2701 tttttccagc attgcttcca gttcaaaact agtatcaaag tggttttcaa tagagttttt
     2761 agatgagtga gtaaccagca caatttcagt aatgccagcc gcaatacatt cattcacgac
     2821 gtattgaatt aatggcttat cgacaagtgg cagcatctct ttcgggatgg ctttcgtcgc
     2881 cggcaacatc ctagttccta atcccgcaac ggggataacg gcttttttga ctttcgtatt
     2941 aatggcagcc atttaaattc tcctggactg ttcgtgtttt gaacgtgttc atatttctgt
     3001 atcgcatccc agtatatcag caccccgaag gggctaagtt ctgaaaagga ggcgagttag
     3061 cataattaag acaattactt atacgaatgg cgacgatagt accaccagcc gacattagca
     3121 ggtaatgcaa atttagcccg cgttatcgtt tgctcattct gcagacaaca tcaagcgcag
     3181 tcgaccaccg gttccccata tttggcattg ccaggcatcg catcgctggc tcaattgatt
     3241 caaataagcg ttacctaaag tgcctaacgg aacaccatta ctgatttgca cctggtgttc
     3301 gccggtattt aacgtagcat tcagacccgc agaaaccaga atgagatttt tcagttcgcg
     3361 atgataatag ccaactaata gcggaaactg ccccggcaga ttggcctgac ggagtaaatg
     3421 gtttacctgc ttcaataacg cgcccaactc tggcaaccgt tgattttggt gtgcaagctg
     3481 ttcctgtaat aatccgttaa acaatgcgcg taataacaag gcagcaagta cgccattatg
     3541 tccagctcgg gtgacatcaa ggcaataaaa tgccagatcg ttttccgaaa gtgcggcaat
     3601 atcaagcacc aggccgggtt tgtccgcggc aaccaattga cgataattaa cccggcaatg
     3661 ggaaatcacc tgctgaaccg gcggttgtag ttcctgtaat aatttcgccg ctgcggcagg
     3721 gttatcaacc attgcatccc agtcgcgaaa aagcctttcc tcttcctcaa cgcgcgaatt
     3781 aaacatgctg ggatagagac aggcaaaaac catctcgcgc aagcgattca gatctttaac
     3841 tggtttcagc aaaacatctt caacgcccag acgtaacgct ttggcaatat ctgccatatt
     3901 ttcggtggca gatatcacca gaaccggtgt ctggtcacct ctgttgcgta tatgttccag
     3961 cagtttaagc ccgttcattc gtggcatcgc gatatcacat atcatcaggt ctggagtgaa
     4021 acctcccagc aactcaaggg catccacccc atcagccgcc agtaccgttg tcgctcccaa
     4081 tgaggaaaac cacgaatcca gaagcgagcg aaataccggc tcatcttcaa caatgagaat
     4141 ctgttttccg accaatggct gcgtcatgtt ctctcccctg actggcttta ctcaatagtg
     4201 gcatgctatt gccacctgcg cctgtcagaa ttaacttaag tgtagataaa aattctggtc
     4261 aaatgttggt gcgtaccaac ggcaaaagtt cgtccatttt cttttccact gccagctgtc
     4321 cggccgcaat ggcagcgtgc gcgcgatgga aatcaagcgt agatatttgc gggcaaacag
     4381 gttgaatcag aatatcgggc ggatcacctg ccatgcggtt ccttttaagg cggttctcca
     4441 gcacctggat agaagtggtc ataatctctg ttgccgttgg cgctgtcacc gcccgacgtg
     4501 tcgttatgct gcctaacctt tctttcagac gcgcatgcca cggcaaagat tcaccattct
     4561 cgctattttc ttcactgaca ttaaaggaga gcagatcttg ttgcatcaaa tgagcatcgt
     4621 gctgcaggtc gaccgctatc acaatatcag cacccaatgc acgcgtgagg gaaataggaa
     4681 ttgggttaac gactgcccca tcaaccagcc agtagccgtt atgcgcgact ggtgccatga
     4741 gtcctggaat actgcatgat gcgcgaatag caagatggag atcgccttca gtaaaccata
     4801 attcacgccc agtacttaaa ttggtggcaa cagccgcgaa gcgacgggaa caattttcga
     4861 tctctgtttc cggcattatt tcgcggtatt gattgaagac acgctcgccg cgcagtaacc
     4921 caccgcgctg ccaggagagg tccatcaggc gtaaaacatc ccaataactg aaagaggtta
     4981 cccaatcttc cagcgcagat aatcgatcgc atgcataggc cgcgcccacc agcgaaccaa
     5041 ttgaacatcc tgcaacgata tcaatttcaa tacccacttt ttttagcgca ttaataacgc
     5101 caatatgcga ccaacctctc gccgcgccag atcccagcgc cagccctatt tttatctttc
     5161 tcattattcc cgcaagattc ccctggaatg caatcgtagc cacatcgcta ctgctcggtt
     5221 aacatagtgc tactcaggcg gttaatacgc cgttattgtt tccagggaga ttatttgtgt
     5281 ctcagctttg tccctgtggt agtgctgtcg agtatagcct atgttgccac ccttatgtgt
     5341 ctggtgaaaa ggttgcacct gatccagaac atctcatgcg ttcgcgttac tgcgcttttg
     5401 tgatgcaaga cgcagattat ttaataaaga cctggcatcc ctcttgtgga acagcggcgt
     5461 tacgtgccga attgatggcc ggatttgcgc atactgaatg gttgggattg accgtatttg
     5521 aacattgttg gcaggacgcc gacaatatcg gatttgtcag ttttgttgct cgatttaccg
     5581 aaggtggcaa aacaggtgca ataattgaac gttcgcgatt tttgaaagaa aacggtcaat
     5641 ggtactatat tgacggtaca cgtccgcagt ttggtcgcaa cgatccctgc ccttgtggtt
     5701 caggtaaaaa atttaaaaag tgctgcggcc aataatggtt gacggtacgg tttagcaaac
     5761 actctcaaca aggtttttcc agcaatgcat tcactccaac gtaaagttct gcgtactatt
     5821 tgtccggacc aaaaaggtct gatcgcacgt attaccaata tttgctacaa gcacgagtta
     5881 aatatcgtgc agaacaatga atttgttgat caccgtaccg ggcgcttttt tatgcgcacg
     5941 gaactggaag ggatttttaa tgattccacc ctgctggcgg atctcgatag cgcattgcca
     6001 gaaggctcgg tgcgtgagct gaaccctgcc ggtcgtcgcc ggatagtgat tctggtcact
     6061 aaagaagcgc attgccttgg cgatttgttg atgaaagcca attacggcgg cctggatgtc
     6121 gaaatcgcgg cagttattgg taaccacgat actttacgtt ctctggttga gcgttttgat
     6181 attccgtttg agctggtaag ccatgaaggg ttaagccgca acgagcacga tcaaaagatg
     6241 gcggacgcca ttgatgctta tcaacctgac tatgtggtgc tggcgaagta tatgcgggta
     6301 ttaatgccgg aatttgtggc acgcttcccg aataaaatca tcaatattca ccattcattc
     6361 ctgcctgcgt ttatcggcgc acgtccttat caccaggcct atgaacgtgg tgtgaagatt
     6421 attggcgcaa ccgctcacta tgtgaatgac aatctggacg aaggcccaat catcatgcag
     6481 gacgttattc atgtcgatca tacctacaca gctgaagata tgatgcgcgc aggtcgtgac
     6541 gtcgagaaaa acgtcttaag tcgtgcgcta tacaaagtac tggcacagcg cgtctttgtt
     6601 tacggtaatc ggacgattat tctttaatcg ccagcaaaaa taactggtta cctttaatcc
     6661 gttgcggatg aaaattacgc aaccagttca tttttctcaa tgtaacactt tacagcggcg
     6721 cgtcatttga tatgatgcag ccctgcttcc cgataaggga gcaggccagt aaaaagcatt
     6781 accccgtggt ggggttcccg agcggccaaa gggagcagac tgtaaatctg ccgtcatcga
     6841 cttcgaaggt tcgaatcctt cccccaccac catcactttc aaaagtccct gaactctcaa
     6901 gcgaatccgt aattaaatat tctgcccaag cggggaagga tgagaagctt cgaccaaggt
     6961 tcgacttgag cgccaacgag agagcgttgc cgcaggcaac gacccgaagg gcgaagcgcg
     7021 cagcgctgag taatccttcc cccaccacca tcgcttcctg aaataatcaa aacctgttac
     7081 tccgagctaa ttttgcccga tggcaccgcg tttaccggac ctaaaatatc cttccctgta
     7141 gttcggataa gcgaagcgca ttcgacaact caccccgcac cgtgcccata aaaaaacccc
     7201 gccgaagcag ggtctatgtg aactaaaatt cgcttagtga cgagcgcgca ccagctgata
     7261 cttacgtgtc agatactcca ccggtacgct ccagatgtgc accagacgcg agaacgggaa
     7321 cagcaggaat aacgtcatcc ccaacaccag gtgcagacgg aagataaacg ctacaccatc
     7381 aaggtgttga gaagcgccac cgtggaaggt cactaccgac tgcgcccagc caaccagttt
     7441 catcatctcg ctaccgtcca tatgctgggc ggagaacgga atggtcaaca ggcccagcgc
     7501 gcactggata acgagcagcg acaggatcag gatatccgct ccggtagtgg ttgcacgcac
     7561 gcgtgggctg aacagacgac gcttaagcaa cagcacgccg ccaatcagac acagcacgcc
     7621 gctggcacca ccagcaaaca tggccatttt ctgtttcact tcaatcggca gccaggcttc
     7681 atacatccag tgcggcgtca acataccgaa gaagtgaccg acaaaaatcc ccagaatacc
     7741 gatatggaac aggttcgacg ccaggttcat ccctttgcga tccagcatct ggctggacgc
     7801 cgcgcgccag gtgtactgcc cgtagtcata acgcagccag ctaccaatca ggaagaccgc
     7861 cccggctatg tacgggtaga tatcaaagaa gaacatattc aggaattgca ttagtgctgt
     7921 cctccggtgg tgatattcag atattgcggc gcgacggcac cggcaaagcg acgctgatga
     7981 gcagtgattg ctgaatcacc gcagcctttg tcagcaaaga atttaacctg ctcttcttcc
     8041 cagacagcat ccagcgcctg cggcgtatcg tcgcgcgctt cgtcggcaat tttttccgcc
     8101 actttgtcgc tgtcgatagc ggtattcgcc agtttcagca gcagatcaaa cagcacggca
     8161 taacggcttt cacgctgttg cagacgcgcg ctcagcaatg ccagaatcgg cgcgatatct
     8221 ttcaaacctt ccacggcttc gctttgcggc agctgcgcca agtactccag atacagcggc
     8281 agatgatccg gcaattcgcg gctgtttaac tgcaagccgt gctgctcgta ctgcgccagc
     8341 aggtccacca tcgcctggcc gcggtcgcgg gattcgccgt gcacatgttc aaacagcaac
     8401 agtgacgtgg cgcggccacg gtcgaacagt tcgctgtact gcgcctgggc atcgagcgga
     8461 tccatcgtcg ttaaatcgcg caggaaaatg cccagcgcat gggcatactc ttttggcaga
     8521 tttttcgacg cggcaatcgc ctcaaacatc tcttgttgat gctgccataa ggcagcatcc
     8581 ggatattcaa ggagacgcga tacaatcacg agttcgatca tggatgcggc tccgttttgc
     8641 tggtcacatc gatggcatcg atacgacggc tgttgaacag attgaatttg gtatctgaac
     8701 cgtggcagcc atcaccaaag gtaaagccgc agccattttt ctccgggaag gcttcccgtg
     8761 ccagttcacg atgactactc ggcaccacaa agcgatcttc gtagttagca atcgccagat
     8821 aacggtacat ctcctgtgcc tgggcttcgg tcagaccgac ctcttccagc gcacggatat
     8881 cgactttacc gtcaacggtt tcagcacgtt tgtaatgacg catcgccagc atacgtctca
     8941 gcgcgcgcag taccggtttg gtatcaccgg cggtcagcag attcgccaga tactgtaccg
     9001 gaatacgcag gctttcgacg tctggcagaa tgccgttgct acccagctca cccgcgtctg
     9061 ctgcagactg aatcggagac agaggcggca cgtaccagac catcggcagt gtgcgatatt
     9121 ctggatgcag cggcagcgcc agtttccatt ccattgccat tttataaacc ggcgactgct
     9181 gtgcggcttc aataacgctc agcggaatac cgtctttaat cgcctgctcg atgactttcg
     9241 gatcgttcgg atcgaggaac acgtccagct gacgctggta aagatctttc tcgttctcag
     9301 tgctggctgc acgttcaatc gcgtcggcat cgtacaacag cacgccgaga taacggatac
     9361 gaccgacaca ggtttctgag cacacggtcg gctgacccgc ttcaatacgc ggatagcaga
     9421 agatgcactt ctcagactta ccgctcttcc agttgaagta gatttttttg tacgggcatc
     9481 cggtgatgca catacgccag ccacggcatt tatcctggtc gatcaggacg atgccatctt
     9541 cttcacgctt gtaaatcgca ccgctcgggc aggtcgccac acatgccggg ttcaggcagt
     9601 gttcgcacag gcgcggcaaa tacatcatga aggtgttttc gaactggcta tacatcgcct
     9661 tctggatgtt gtcgaagttc ttgtctttcg ccagtttgtc aaactcaccg cccaggtcat
     9721 cttcccagtt cggccctttt tcgatttttg ccatccgttc gccggtaatc agtgaacgcg
     9781 gacgggcaat cggctgcgct ttgctgcctt ccggcgcggt atgcaggttc tgatagtcaa
     9841 aatcgaacgg ctcgtaataa tcgtcgatcc ccggcagatg cgggttagcg aagattttac
     9901 ccagcagcat ggcacggtta cccatgcgcg gctgcagttt gccgttgatt ttacggatcc
     9961 agccgccttt gtatttttcc tggttttccc agtcagtcgg gaagccctgg cccggcttgg
    10021 tttccacgtt gttgaaccac gcgtattcca cgccttcgcg gctggtccag acgtttttac
    10081 aggtaactga acaggtgtgg cagccgatgc acttatcgag attcagcacc atgccgactt
    10141 gtgaacgaat tttcatttta cgctctcctg tacctggtca ttgccttcgc catctaacca
    10201 gtcaatgttc ttcatcttac gcactacaac aaactcatcg cggttagaac ctacggtgcc
    10261 gtagtagtta aagccgtatg ccagatgggc atagccgccg atcatatgcg tcggtttcgg
    10321 cgtgatacgg gtgaccgagt tatggatacc accacgctgt tgggtaattt ccgaaccagg
    10381 caggttaacg atacgttcct gcgcgtggta catcatggtc atccctgccg gaacacgctg
    10441 gctgacaacc gcacgggcag tcagagcgcc gttgctgttg aagacttcaa tccagtcgtt
    10501 atcggcgata cccagctctt tggcatcggc ttcactcaac cagaccaccg gaccaccgcg
    10561 acctaaagtc agcatcaaca ggttgtcgct gtaggtggag tggatacccc acttctggtg
    10621 cggcgtcagg aagttgagcg ctttttccgg gttgccgttg gatttctggc ccatcacttc
    10681 tttcaccgaa cgggtgtcga tcggcggacg ataaaccagc aagctttcac cgaaatcacg
    10741 catccactgg tgatcctgat acagttgctg acgaccagag agtgtacgcc atgggatcag
    10801 ctcgtgaacg ttggtgtaac cggcgttgta agaaacgtgt tcatcttcca gaccagacca
    10861 ggtcgggctg gagataattt tgcgcggctg tgcctgaata tcgcggaagc ggatcttctc
    10921 gtcttcttta ttcagcgcca gatgcgtatg gtcacgaccg gtaaattcgc tcagggcagc
    10981 ccaggctttc acggctacct gaccgttggt ttccggtgcc agtgtcagga tcatctctgc
    11041 cgcatcaatt gcggtgttca gcatcggctg gcctttcgcc ggaccttccg ctttggtgta
    11101 gttgagctta cgcagcagat ccatctcgct ctgggtgttc caggcaatcc ctttaccgcc
    11161 gttaccgatt ttctccatca gcgggccgat agaggtaaag cgttcgtaag ttgccggata
    11221 atcgcgctct acgaccataa tgtgcggtgc agttttgcct gggatcaggt cgcattcgcc
    11281 ttttttccag tctttcacat ccagcggctg cgccagttca gcggcagagt cgtgctggat
    11341 aggcagcgtg acgatgtcgg tttctttacc cagatggccg acgcacactt cggagaattt
    11401 cttcgcgatg gctttgtaga tttcccagtc gcttttcgct tcccaggccg gatcgaccgc
    11461 cgcagacagc gggtgaataa acggatgcat atccgaagta ttcatgtcgt ctttttcgta
    11521 ccaggtcgcc gtcggcaaaa tgatgtcgga atagagacag gtgctcgaca gacggaagtc
    11581 cagcgtaacc accagatcca gcttgccttc cagaccattg tcctgccagt ccacttcttc
    11641 cggcttcacg ccgccctgct gccccagatc tttaccctgg ataccgtgct ccgtccccag
    11701 caggtacttg agcataaact catgaccttt accggaagaa ccgagcaggt tagaacgcca
    11761 gatgaacagg ttgcgcgggt ggtttttacc gttttctggt tgttctgccg caaaacggat
    11821 ggaaccctct ttcagggatt tcaccgtata gtccaccgga ttcatcccgg ctttttccgc
    11881 ctcgccagcg atagtcagcg ggttagtgcc taactgcggt gcagacggca gccagcccat
    11941 gcgttccgca cggacgttaa agtcgatcag gtgtccggta taacgagatt tatccgccat
    12001 cggcgacagc agttcttccg cagttacggt ttcataacgc cactggctgg agtggttata
    12061 gaaataagaa gtgctgttca tgtgacgcgc cggacgctgc cagtcaaggg caaacgccag
    12121 cggctgccag ccggtttgcg gacgcagttt ttcctgacct acatagtgcg cccagccgcc
    12181 accgctctga ccgacacagc cgcagaaaat cagcatgttg atcagaccac gatagttcat
    12241 atcgaggtga taccagtggt tcagccccgc accgacgata atcatcgaac gaccgtgcgt
    12301 tttatcagcg ttatcggcaa attcacgggc gatgcgaata atctggctgc gagaaacgcc
    12361 ggtaatctgc tcggcccagg ccggggtata agctttcaca tcgtcatagc tggttgcaca
    12421 gttaacgtcg ttcaggccac gttccagacc gtagtttgcc agcgtcagat cataaacggt
    12481 ggtcaccagg gcggtgctgc catcagccag ttgcaggcgt ttcaccggca gtttgtgcag
    12541 cagcacgttt tccagttcca ctttgttgaa gtgttccgtg ccgtcgccac caaagtacgg
    12601 gaagcctacc tcagcgatct catcctggct acccagcagg ctcagttgca gctcggtttc
    12661 ttcgccagtt ttgccgtcgc gctgctcaag attccatttg cccttctcgc cccagcggaa
    12721 gccaatagaa ccgttcggcg caaccatttc gccattggta ttaaaggcga cagttttcca
    12781 ttccggattg ttttcctggc ccagcgcatc aaccagatca gcagcgcgca gcatacgacc
    12841 tgcagcgtag taaccgtcgc gttcttccag catcaccagc atcggcatgt cggtgtagcg
    12901 acgcacatag tcggtgaaat actggcttgg gttgtcgagg tggaattcac gcagcattac
    12961 gtggcccatc gccagcgcca ttgccgcatc ggtgccctgt ttcggtgcca gccacagatc
    13021 gcacagtttg gcgatttcag cgtagtctgg tgtgacggca acagttttgg tgcctttgta
    13081 acgcacttca gtaaagaagt gagcatccgg ggtacgcgtc tgcggcacgt ttgaacccca
    13141 ggcgatgatg tagctggagt tgtaccagtc agcagattcc ggtacgtcag tttgctcgcc
    13201 ccaggtttgc ggagacgcag gaggcaggtc gcagtaccag tcgtagaagc ttaagcaagt
    13261 accgccaatc agcgagagat agcgcgcacc cgacgcgtaa gaaaccatcg acattgccgg
    13321 aattggcgag aagccagcga cacggtccgg gccgtagttt ttgatggtgt aaacgttaga
    13381 tgcggcgatc agttcgttca cttcctgcca ggaagaacga acaaaaccac cgcgtccacg
    13441 cacctgttta aagcttttcg ctttatcggc gtcttcaatg atagaagccc atgcctcaac
    13501 cggatcgcta tgcagcgcct tcgcttcacg ccacattttc atcaggcgtt tgcgcatcat
    13561 cgggtatttc aggcggttgg cgctgtaaag ataccaggag tagctggcac cgcgcgggca
    13621 gccgcgaggt tcatggtttg gcagatccgg acgggtacgc ggatagtcag tctgctgggt
    13681 ttcccaggtg accagaccgt ttttgacgta gattttccag ctgcaggagc cggtgcagtt
    13741 taccccgtgg gtagagcgga cgattttgtc atgctgccaa cgctggcgat atccatcctc
    13801 ccagtcacgg ttggtattga gaagctggcc atgcccatcg gcaaaggttt cgcccttctg
    13861 cttgaagtag cgaaaccggt ccaggaattt actcatcggt tttctcctgt gggagcctgt
    13921 cggctctctg ataaatcgac attgctaatg tttaagggca aggtaacgct ctgaaacagc
    13981 gtgggaattg ataacgatca agagtgatgg ggatgaaaaa taaagtaaat tcctaagata
    14041 cccctttagg ataattaaca gttaaagcat aacatgctgt aaattaagac gttttatacc
    14101 tgtagttatt taaagcatga agatttttat gcagatgggt attaaggagt attccccatg
    14161 ggtaacatat taatggctct taatgaaatc cggcgaaata agccatataa tatgagtatg
    14221 ttgtaactaa atgacgcata aaaaaagcgc gacatcatgc cgcgcaaagg ataatcaaat
    14281 attttactct atataattcg gtttacagga aggcggcaag tgaatgaatc ccaggagctt
    14341 actaaagtaa gtgactgggg tgaatgaacg cagccgcagc acatgtaacc cgaagtatga
    14401 cgagtaacgg tttatttttt agaatgccga ccatataccg cccaggtaat cactacgcag
    14461 gcgatataga aaatcaaaaa tactttcatt gcgccgactg gcgaacccgt taatgccagc
    14521 gagctaccga acgctttcgg gataaagaag ccaccaatcg cgccaatcgc agagatgaaa
    14581 cccaacgccg ccgccgtgtc ggttgccgct tcacgcatcg cacgttcgtc agaaccccct
    14641 tctgctttca cgcgatccat tgtcagttta cggaagatca cggaaatcat ctggaaagtg
    14701 gaaccactac ccagcccagc tgtcaggaac agcgccagga agaccgcgaa gaacgccatg
    14761 aagcttccgc cctgcccgtc agtcggtaag gtcaggaaca gcaggccgct gaaaatcgcc
    14821 atcagaataa agttcaccag cgtgacacga gttccgccca aacggtcaga taatgcacca
    14881 cctgcagaac gcgccagcgc accaataaac ggcccgaaga aagcgtattg cagaatctga
    14941 acatccggga actgcgtttt tgacagcatc gcaaagcccg cggagaagcc gatgaaggag
    15001 ccgaaggttg ccagatacag caggctcata atccacagat gaccccgttt gagtaccggc
    15061 aactgctcct tgatggaggc tttcgaggta gcaagatcgt tcatgccaaa ccacgccgca
    15121 atggtgaaga tggcaaggaa cggcacccat atccaggacg cattcgccag atacagctca
    15181 gtcccatccg gctgtttgac gccctggcta ccaaatactg cgaaaatcga cagtgatacc
    15241 accagcggag caaccaactg catgacgctg acgcccatgt ttcccagacc accattcaga
    15301 cccagcgcgc caccctgctt ctgtttcgga aagaagaagc tgatgtttgc catactggat
    15361 gcgaagttcg cgccagcaaa gccgcatagc agagagatga tgatgaagac gctataaggc
    15421 gtggaggtat cctgcacggc aaaacccagc cagacgcaag gaataatcag aataccggtg
    15481 ctgaacgccg tccagcgacg accaccgaag ataggaacca taaaggagta tggaacacgt
    15541 aataacgcgc cagaaaccga aggcagcgca gtcaacataa atagctgatc ggtcgtaaaa
    15601 ttaaaaccaa ctttcggtaa gttcaccgca acagcgctga acaacatcca tacgcaaaac
    15661 gccagcagca gacagggaac ggaaatccac aggttgcggc tggcaatacg ttgaccgcgt
    15721 tgttgccaga acgcaggatc ttccggtcgc caatctgtaa tgacagctcc agtagccctt
    15781 tcgggggcgg atgagtgact catagacacc tctgatactc gtttcgatgt ttgccacctt
    15841 agtgtctgta gctaaaggca atttgatgta aatcaaacga taagataact ttatctatca
    15901 ttgatattta tcattaccca tagtgagtac agtgatttca taaaaattat gagatttttc
    15961 acggtgctgt aaaatcccta cccttaccga tgtaaagcga ctaaccacac ggcaaataag
    16021 gagtaactct ttccgggtat gggtatactt cagccaatag ccgagaatac tgccattcca
    16081 gaatgcatcg tcacattcat taaggttatt gcttatttaa agcctgaagg aagaggttta
    16141 catgcttaaa cgttgtctct ctccgctcac cctggttaat caggttgcgc ttattgtgtt
    16201 gctttctact gctattggac tggcagggat ggcggtttct ggctggctgg tgcaaggcgt
    16261 tcagggcagc gcccatgcga tcaacaaagc gggatcgctg cgcatgcaaa gttaccgtct
    16321 gttggcagca gtgccattaa gcgagaaaga caagccctta attaaagaga tggaacaaac
    16381 ggcatttagc gccgagttga ctcgagcagc agaacgagac ggacaactgg cgcaattaca
    16441 gggtttacaa gattactggc gtaatgaact gatccctgca ctgatgcgtg cacaaaaccg
    16501 cgaaacggtg tcagcggatg tcagccagtt tgttgccggg cttgatcagc tggtatctgg
    16561 ttttgaccgc accacggaaa tgcgcattga gacagtggta ctagtccatc gggtaatggc
    16621 ggtatttatg gcacttttac tggtgttcac tattatttgg ttgcgggcgc gactgctaca
    16681 accgtggcgg caactgctgg caatggcgag tgccgtcagc catcgcgatt ttacccaacg
    16741 cgcgaacatc agcgggcgca acgaaatggc gatgcttgga actgcattga acaatatgtc
    16801 tgcagaactg gccgaaagtt atgccgtact tgagcagcgg gttcaggaga aaaccgccgg
    16861 gctggagcat aaaaatcaga tcctctcttt tttatggcag gctaaccgcc gtttgcattc
    16921 ccgcgccccg ctgtgtgaac gcctgtcacc tgtactcaac ggcttacaga atttaaccct
    16981 gctacgtgat atcgaattgc gggtgtatga cactgatgat gaagagaatc atcaggagtt
    17041 tacctgccag ccagatatga cttgtgatga taaaggctgc cagctctgcc cgcgcggcgt
    17101 attacccgtt ggcgatcgcg gcacaaccct gaagtggcgg ctggctgact ctcatacgca
    17161 gtacggtatt ttgctggcga ccctgccgca ggggcgtcat cttagccatg atcaacaaca
    17221 actgctggat accctggttg aacaactcac cgccacgctg gcgctggatc gccatcagga
    17281 acgccagcaa cagttgatcg tgatggaaga gcgtgccacc attgcgcgcg aactgcatga
    17341 ttctattgcc caatctctct cttgtatgaa gatgcaggtg agttgtttac agatgcaggg
    17401 cgatgcgctg ccagcaagca gccgcgaact gttaagtcag atccgtaacg aactgaatgc
    17461 atcctgggcg cagttgcgtg aattgctcac cacattccgt ttgcagctca ccgagcctgg
    17521 attacgtccg gcgctggagg cgagttgcga agagtacagc gccaaatttg gcttcccggt
    17581 gaagctggat tatcaattgc cgcctcgtct ggtgccttcg catcaggcaa tccacttgtt
    17641 gcaaattgcc cgtgaggcat taagtaacgc cctcaaacat tcgcaagcga gtgaggtcgt
    17701 ggtgacggtg gcgcaaaacg ataatcaggt caaactgacc gtccaggata acggctgcgg
    17761 cgtgcctgaa aatgccatcc gcagcaatca ctacggcatg ataataatgc gcgatcgtgc
    17821 gcaaagttta cgaggcgatt gccgcgttcg ccgtcgtgaa tcaggtggca ccgaagtggt
    17881 ggtcaccttt attcccgaaa aaactttcac agacgtccaa ggagataccc atgagtaatc
    17941 aggaaccggc tactatcctg ctgatcgacg atcacccgat gctgcgaact ggcgtaaaac
    18001 agcttatcag tatggcacca gatatcaccg tggttggcga agcgagtaat ggcgaacagg
    18061 gtattgaact ggcggagtct cttgatcccg atctgatcct gttagatctc aatatgcccg
    18121 gcatgaacgg tctggaaacg ctggataaac tgcgcgaaaa gtccctctca gggcgcattg
    18181 tggtattcag cgtctctaac catgaagaag atgtggtcac cgcactgaaa cgcggcgcgg
    18241 atggctatct gttaaaagat atggaaccgg aagatctgct gaaagcattg catcaggcag
    18301 ctgctggcga aatggtatta agcgaagcat taacgcctgt tctggccgcc agcttgcgcg
    18361 ctaaccgtgc cactactgag cgcgatgtta accagttaac cccacgcgag cgcgatattc
    18421 tcaagctgat tgcccagggt ttgccgaaca agatgattgc ccgccgcctg gatatcaccg
    18481 aaagcacagt aaaagtgcac gtcaagcaca tgctgaagaa aatgaagctc aagtctcgcg
    18541 tggaagcagc ggtatgggtg catcaggagc gcattttctg attacggttc ccagcgcagt
    18601 tcgtcgtttg acaatgcgtc gaacggttcg acaagcgtta gcgtgatctc attggaggag
    18661 acacgctgcc cctggttatc ttccaccacc atcgacaatc gccagtgatt gctcgcccct
    18721 tccccgttct gccagtcagg catgatcagc gtccagccct ccgcgctgtt ggcttgtgcg
    18781 cctggcgtca aacttaatat ctgcgtatcg ccctgccaaa tcagttgccg aataccataa
    18841 cgactgcgga tttgtaattt cagcggcact gtttcgccag gttttagatc ccacggaggt
    18901 gtcgccagaa acaccgttaa cgtttttcgc tgtcggtact caagagtcgg tagattattt
    18961 cgctgcggat tatcatagcg actaccacgt aacgactgac tttcggcaac ctcgcccgca
    19021 gaaagttgtt ttttgagcgg tacaccaaag cggtaattaa gattcagccc gaggttattt
    19081 tgattctcgc cactttcacc ctgtttatgc tgggccgtca cagtgactaa tggcacaggg
    19141 gtgtaattta atcccagact caacgcgacg ggattgtgat aacccgtacc agagttaaac
    19201 aaatcaacac gatcaccaaa atactgttct acgctgacac tggtattgag gtgttgatag
    19261 aacggcatgc gcatccgggc tgtcaggtca tacccgcgcg ccatccgttg ttcctgcgtg
    19321 gctgtctgtt catgccatgc agcaaacggc tgataaaagt ttgccgatag tcgcaaatat
    19381 tcgccccacg cttcggcacc aaagcccgct cgctgaagat tttcgtccag caagttgtca
    19441 taaaaagtgt tataacccac cagccagttg ccgcgcgccc agcgttgccc aacgcccaca
    19501 ttgctcacca acccatcatc ctgctgagta agaccaagct ggctccaggt gagataacga
    19561 tcattatctt gtaacggcac aaaccagctt ccacgactgc cggtgaaatg tccttcgtta
    19621 tccactttga cgtcaacact ggcatttccc cacggtgata gccaggactc tacgtgctga
    19681 ttaacctgtt gactaagcgc gtcgcggact tttcccaatg cgaaagcttt tgcctgctcg
    19741 ccagtatcca gcccgttatc attcatactg gtttcgccga aatctttcac aatttcagca
    19801 aagtgttttt ccccatcatg attttcaggt gccatgccta aatccggcag accatcattg
    19861 ttattatcaa agggatttgc cgctttttgc tcgaaggtag attgtgcgtt agctgtaccg
    19921 cctgccgcca gcaagagtaa ataaaacgga ataatgcgag gaacgaaacg gctcaaaacg
    19981 tcggtaactt ccgataaaaa atgaaaaacc atagccttaa agaataacga ttactggcaa
    20041 cttttgtcgt attttctcgc gctttcagga aaatccttaa aaatgtgacc gattggtcag
    20101 acgctgcaga agcagtaaga tagaagatga gtgtctaatt ccctgaatac aggagtaaat
    20161 aatgcaaaaa atcgtgatcg ttgccaatgg cgcaccttac gggagcgaat ccttgtttaa
    20221 cagcttgcgg ctggccattg cgttacgaga gcaggagagc aatctggatc tgcgtctgtt
    20281 cctcatgtct gatgcggtca cagccgggtt gcgcgggcaa aaaccagggg aaggctacaa
    20341 cattcagcaa atgctggaga tccttaccgc tcagaatgta ccggtgaaat tgtgcaaaac
    20401 ctgtaccgac gggcgcggga ttagtacact tcctctgatt gatggggtgg aaatcggtac
    20461 tcttgtggaa ctggcgcaat ggacgctgtc agccgataaa gtgctcacat tttaatgttt
    20521 gagggggcgt ctgacgcccc actatgaggg aagtttactc aggcgaatcc cggccgtaac
    20581 acaccatccg aataattctc cgccagcagt ttttttaccg ataccagcaa atcattcagc
    20641 ccatcgtcct gcattcccag tttgataagc tcctgttcca gtgaaaacag gtattgtgcg
    20701 ttggttccca gcggaccgct cgccgccgca atcaacggcg cgatgacctg agcgcgagtg
    20761 tcagattcat attctggatg tcgcgggtcc ataataaaca caatggcgtt tactgtgcgt
    20821 ccatcatcaa gatcaagctg acaccaggtt ggcaaataac agccggtaat catctcgcgc
    20881 ttccacaaca gggttagttc ctgctccagc gtctcttctg gcagtcgata ggcgacgcct
    20941 gtggtgcgtc cgccctcttt cagtgcaagc atccgtcccg gctggtgcgc agtcccgcgc
    21001 ccggcggtca ggcgcaggca aaatgcgcga tgccatccaa ccagtgtacc ggtgcacgat
    21061 tcggtaaact ccagtgccgg attccacatc aacgatccat aaccgaagat ccacaccggt
    21121 ccctcatcag gtcgacaagc cagcgtcgcc gccagcgaag ccgcccgttg ttctgctgac
    21181 cataagagtg attcttcaat ggcaccaaat gccgttttac aatcggcatt catcaagaaa
    21241 tcacgcgtta tcaccttaca cctccgccac tgcatacttc cctgcgacaa ctttttggtg
    21301 tcttccggac atttttactg ctcattttga aaccactaac gggacaatat gcaatccacg
    21361 gaccacttgc aaggcaacac cgcacgaata gctttaacta agctaccggt tttacgattt
    21421 tttatgccat ttatcatcat cccctttggc atattcatgc ttcacagcag cccaggccac
    21481 tttatgcgcg gtttcttcgc gactggcgtc atcacgccga tcttctttat ctttatattg
    21541 atcccatgcg ctgttgaacg cttctttata gatatcctgg gcatgagacg gtagaacgtg
    21601 ctttacgctt tccggcagat cgcttttcgt tttatacggc atcgttgact ccttttacaa
    21661 agttgaacat taagtgtggt caacaatatc tactcttgcc aaaacataag aattttcatg
    21721 tcagactgtt cttaagaaac gctaaaacaa acattgtcta aacgtattac ttatttttat
    21781 gccccaatga gtaaaaaatc gacagcgggg taaaaattcg taaaatgtta ccgatatcca
    21841 gacactttct gttatttttc ctacctattt tttacatttt cgataaattc atctgcaaag
    21901 ggataaccat aatgtcaaat gctcaagagg cggtaaaaac ccgccacaag gagacttcgc
    21961 ttattttccc ggttctggcg ctggtagtgc tgttcctgtg gggaagtagc cagacactac
    22021 cagtggtcat tgccatcaat cttcttgcgc ttattggtat tttaagtagc gcctttagtg
    22081 ttgtccgtca tgcggacgta ttagcccatc gcctgggaga accttacggt tcgcttattc
    22141 ttagcctttc agtggttatt cttgaagtca gtttgatttc agctttaatg gcaaccggcg
    22201 acgccgcgcc aacgctaatg cgtgatacgc tctattcaat cattatgatt gttaccggtg
    22261 ggctggttgg cttttcatta ttgttgggcg gtcgtaagtt tgccacccaa tatatgaatc
    22321 tgtttggtat caagcagtat ttaattgcgc tgttccccct ggcgataatc gtactggtat
    22381 ttccaatggc tctgcctgcg gcgaattttt caaccggtca ggcgttactg gtagcattaa
    22441 tttctgcggc aatgtatggc gtatttttgc tgatccagac caaaacgcat caaagtttgt
    22501 ttgtctacga gcacgaagat gacagtgatg acgatgaccc gcatcacggt aaaccgtctg
    22561 cccatagcag cgtgtggcat gctatctggt tgattatcca tctgattgcc gttattgcag
    22621 tcaccaaaat gaatgccagc ccgctggaga cattgctcga cagcatgaat gcccctgtcg
    22681 cctttactgg cttcctggtg gctctgttga ttctgtcgcc ggaaggttta ggtgcgttaa
    22741 aagcagtgtt gaacaaccag gtccagcgcg cgatgaatct gttctttggt tcagtgttag
    22801 caaccatttc gcttaccgta cctgtcgtca cgctaattgc ctttatgacg ggtaacgaat
    22861 tacagtttgc acttggtgcg ccagaaatgg tggtgatggt ggcctcttta gtgctgtgcc
    22921 atatctcctt ctccaccgga cgtactaacg tgctcaatgg cgcagcgcat ctggcactgt
    22981 ttgccgccta tttgatgacg atatttgcct gacagttata tctcctccga tgacggaaat
    23041 cgggggagat aatataaatt cctgcttaat gtatttcttc atactacctg gacaggtcgt
    23101 taatcagaat tgcgagcctg taccacaacc tgcacgaaac cactgcaaca gctgttgaaa
    23161 agccggaatg tactctttat tgcaaacatt tcagggatga agtgaagatg aattgagacg
    23221 tagtatccac accaagccgg cgttatccgg tgaggcgcaa tgttgcgggg gctttatccc
    23281 tggtggcatt ggttgctgga aagagaaaac ccccgcacgt tgagaggtat aacctgacaa
    23341 cagaacgggg gctaatcttg aaaccagaca cttcaagaat agccgcaaaa tgttgtcatt
    23401 acaacaaggc ggctatatga cgctcgcgca gtttgccatg attttctggc acgacctggc
    23461 agcaccgatc ctggcgggaa ttattaccgc agcgattgtc agctggtggc gtaaccggaa
    23521 gtaaggtgaa aacgagcgtc aggctgccgt gatggcaata tgcgctcgaa accggccgca
    23581 ggggtaacag cctgcggcct tttttgtatc cggcacccat gaaaaaagtc ttaacgcaga
    23641 acgctaagac tttatttttc aagcaaaaaa gattacttgc tggtatccag ttcttcgaaa
    23701 cctttcacca gatcatcaat cgctttcatc tgcttgagga acggttccag tttagccagc
    23761 ggcagcgcgg atgggccatc acatttcgca tgttccggat ccggatgcgc ttcaataaac
    23821 agccccgcca gacctaccgc cataccggct cgtgccagct cagccacctg agcacgacga
    23881 ccgccggaag ctgcgccaaa cggatcgcgg cattgcaatg cgtgggtcac gtcgaaaatc
    23941 accggcgagt taccagacac tttcttcata atgctgaagc ccagcatatc gacaaccagg
    24001 ttgtcatagc cgaagttagc accacgatcg caaagaatca ctttttcgtt gccgccttct
    24061 ttgaatttat caacgatatt acccatctgt cccgggctga caaactgtgg tttcttgacg
    24121 ttaattaccg caccggtttt cgccatggct tcaaccaggt cagtctggcg agcaagaaac
    24181 gccggcaact gaatcacatc cacgacatca gcaacgggct gtgcctgact tggttcgtga
    24241 acgtcggtga taattttcac gccaaaagtc tgcttcaact cctggaagat tttcatccct
    24301 tcttccaggc ccggtccacg ataagagtgg atggaggagc ggttggcttt gtcaaaagag
    24361 gctttgaaca cgtaagggat acccagtttc tgggtcacag ttacgtagtg ctcgcaaatg
    24421 cgcatcgcca gatcgcgaga ttccagcacg ttcataccgc caaacagtac gaacggcagg
    24481 tcatttgcta cgttgatgtc gccaatgcta accacttttt gtttcatagg atcgccttaa
    24541 tcttgagtaa aatgtcgatt aattaatgca gcacaatatg tttatgcgcg atgttattta
    24601 tttgcgcacg gatcatttcg ctgatcgggt cttccggaca ctgttcaacg aaataactta
    24661 aatcgttcaa cgcaacgtgt tcgcaatcca gttgcgcata aatcaacccg cgatcgcgaa
    24721 tttcataggg atcttcaggg ttgaattgta ataaagcttc gctggtgcgt aacgccagct
    24781 ccatctgatt ttcttccatc aacgaggctt tgagtgtatc cagcaatgtg cggattacct
    24841 caatgttatc agcttcatca aggtcttcat aaaacagttc cgccgacggg ctgatatttc
    24901 cctttaacca tacgtccagc atatgttcgc ttaacgattc accgttaaaa ggattaatca
    24961 gccaaatttc gccatccgga cattcaatgc gcaatatcag ctgcgtaggg aaaatcaccg
    25021 gcagcagcgg caaatcgaga cgattcgcga cccataataa aaccgcacct aatgataccg
    25081 cactgccctg tcgattcttt aacacctggt ccagccataa tgcatcggaa agacgataaa
    25141 cgccgcgtga ggctttaaat ccccagtcgc cgtaaaacag cgcgatcagt ttttccagct
    25201 gctcttctaa aggcagaagc tggctgattt cttccttcgc cagactaacg agacgctcca
    25261 gttcgtcgta aacatcttgc gagggaaaat cgcggcggat tgcttcgcaa gccaggatca
    25321 tgccttcgca caatggcgct ttattaaatt cgaaatcagc taacgatctc atgacttacc
    25381 ccagtaacgg tacttttgtg gtggcgagtt taatgatgat gtacagcacc accaacgcca
    25441 gcgggaaggc aataatgcgc gcctgctgac tgtgcatacg acgataatcg agtgcaataa
    25501 aacccaaaac gatataaatg ataactccaa acagcttttc agtcagccac tgtgcctgcc
    25561 cggaaaatgg caggatgtgc gctttagcca tcaacgcaat gccgcttaac aataacaccg
    25621 tatcgacaac cggcggcaca atgcgcgtcc agcgagcaaa tgcctgtgga tgcttctgat
    25681 aacgtagcca gaaacgtaag gttaatagcc caacagaaag cgcgatacta ataagatgaa
    25741 cactaagcag tgtagaaaaa cttgtcattg ataatagcgg ccgagcgtta cgcgctcgtt
    25801 atcaccatag tcacggcagg tttcgacgtc atgatacccc gcgaggataa atgcttgtcg
    25861 caccgcttcg ccctgctgcc agccatgttc cagaagcaga aagccgccgg ataccagcgc
    25921 gttacgcgac tgttcgatga tatgcacgat gtctgccatt ccactgtctg ccgcaaccag
    25981 cgcagtgagc ggttcaaagc ggacatcgcc ttgttgaaga tgtgggtcct gctcgtcaat
    26041 atacggcgga ttgctgacaa tcatcgcaaa ctgctgcccg gctagcgcgc taaaccagtc
    26101 gctttgtaga atgtggatat ttttgattgc cagatgctgc gcattacgtt gtgccagagc
    26161 gacagcatcg ggcatgcgat ctacagcggt aatttcgcag tccgggcgct cgctggcaag
    26221 cgcaagcgca atcgccccgg tgcctgtacc gagatcgaga atgcgacaag gttgttcagg
    26281 taggcgctcc agtgcctgtt ccaccagaca ttcggtgtcc gggcgcggaa tcaaggtagc
    26341 tggcgataca aataacggca gcgaccagaa ttcacgctgc ccagtcaaat gtgcaacagg
    26401 ttctccagtg cgacgacgcg ccagtagcgc gtcgagttgc tgaagttgtt cgtcagtcag
    26461 ttgcgtttcg ccaaaggcca gaacaaaagt ccgcccccgg ccagtgacat actccaataa
    26521 gatttcagcg tcacggcgtg ggctttcgct accctgtaat tggttgatgg cgtcacgcag
    26581 ccagtgttga taatccatta ttcctgctcg gacaacgccg ccagttggtc ggcctgatgt
    26641 tcctggataa tcggttcaat cagcatatcc agcttacctt ccatcacttc atccaggcgg
    26701 tagagcgtca ggttaatgcg gtgatcggta acgcgcccct gcgggaagtt gtaagtacgg
    26761 ttacggtcgc tgcgatcgcc actccccagc aggttacggc gggtagacgc ttcggcctgt
    26821 tgacgttttg ccatttcagc cgcgtggatg cgagcaccga gcactgaaag cgccttcgct
    26881 ttgtttttat gctgagatcg ttcgtcctga cattcaacaa caatcccggt tggcaagtga
    26941 gtaatacgga ttgccgaatc ggtggtgtta acgtgctgac cacctgcccc tgaagagcgg
    27001 aaagtatcaa tacgcaaatc tgccgggtta atatccggca gttctgcgtc aggcagttct
    27061 ggcattaccg caacagtaca agcagaagta tgaatacgac cctgtgattc cgtggccgga
    27121 acacgctgca cgcgatgacc gccggattca aatttcaaac gaccatacac accatcaccg
    27181 ctaatttttg cgatgatctc tttataaccg ccatgttcac cttcgctggc gctcatgatt
    27241 tctacacgcc agcggcgggc ttcggcataa cggctgtaca tacggaacag atcgccagcg
    27301 aacagcgccg cttcgtcgcc gccggttccg gcacggactt cgaggaaggc gttacgttcg
    27361 tcatcaggat cttttggcag taacagaacc tgtaattgct gttccagttg ctcgcttttt
    27421 tcttttgctt cgcgcagttc atcctgcgcc atctcacgca tttcaggatc gtcgagcatc
    27481 atctgtgcgg tttcgatatc ttcctgaact tgttgccagt cggtgaaaca gcgcgaaaca
    27541 tcacttaact gcgcatattc acgagataat gcgcgaaaac gttcctggtc agcgatggtt
    27601 tgcgcatcac ccagcagcgc ctgaacttct tcatggcgtt catgcagggc ttccagtttg
    27661 gcaacgatag aaggcttcat aggcgtaaat gcaccctgta aaaaaagaaa atgatgaact
    27721 gctactccag cccgaggctg tcgcgcagaa tattcaggcg ttcgttatcc ccgtcacggg
    27781 cggcctgttg aagtgatttc gttggcgcat ggatcaggcg gttagtcagt ttccatgcca
    27841 gatcctgcat tatggcttgc gcgtcgccgc cctgctcaag agcggctaat gctttggcgg
    27901 tcaattcatc acggatatgc tcagcctggc tgcgatattc acgaatggtt tcgctggcac
    27961 tttgagcgcg taaccaggac ataaactcgc tcgtttcctg agcaacaatc gtttcagctt
    28021 ccacagctgc agctttacgc tgcgccaagt tgtgcgaaat gatgctttgc agatcgtcca
    28081 cgctataaag ataagcattc gccagtttgc caacttccgg ctcaacatcg cgcggaacgg
    28141 caatatccac caacagcatc ggttggttgc gacggctttt taatgcacgc tcaaccatgc
    28201 ctttcccgat aatcggcaac gggctggcgg tggaactgat gatgatatcg gcttcgcgca
    28261 gacgctcgtc gatatcgctc agggcaatca cttccgcgcc gacttcatct gccagaattt
    28321 gggcacgttc gcgagtgcgg ttggcgataa tcatcttctg tactttgtgt tcgcgcagat
    28381 ggcgcgccac cagctcgatg gtttcgcccg caccaaccag cagtaccgtc accgtagaga
    28441 gcgattcaaa gatctgccgc gccagcgtac aagccgcaaa agcgacagac acagcactgg
    28501 caccgatatc tgtttcagtg cgaacgcgtt tcgcgacaga gaaagatttc tggaacatgc
    28561 gttccagttc gctggccttc atatggcctt tttgcgaatc ggcaaacgct tttttaacct
    28621 gaccgaggat ctgcggctcc ccaagaacca gtgaatccag accactagca acacgcatta
    28681 aatggctgac agcgtcgtta tcctgatgcc agtagaggct tttacgcaga tcttcttcat
    28741 taagattgtg ataatcgcaa agccagcgga ttaacgcctc ttgcaggttg tcctgctctt
    28801 cgacgctaag ataaagctca gtgcggttac acgttgacag caccacaccg ccctgcacca
    28861 tcggctgcgc gagcaggctg tccagcgcct gatcaagttt gtccggcgaa aacgatacac
    28921 gttctcgcag cgatacaggt gccgttttat ggttaatacc gagcgctaaa agggtcatgt
    28981 ctgcgggaaa taataccaac gttgataagg ttagtctcgg cgcatcatac cgtatgcgcg
    29041 agatcaataa aagggagcgc ccccttttgg agtaattgcc cgaacccgtt agatttctgc
    29101 aattaagaca acttgaacat agacgatgac taatggtgac gctagcatta agggttataa
    29161 ctgcaacgta tctcaaggat ttgtcatcat tatgcccctg cctgattttc gcctgattcg
    29221 cctgctgccg ctggcaagcc tcgtcctcac agcttgtacc attacttccc ctaaaggtcc
    29281 tggtaaaagc ccggattctc cccagtggcg acagcatcag caagacgtgc gcaacctcaa
    29341 tcaatatcag acgcgcggcg cgttcgctta tatttccgac cagcagaaag tctatgctcg
    29401 tttcttttgg cagcaaacag gtcaggatcg ttaccgcttg ttattaacga acccgctggg
    29461 cagcactgag ctggagttaa atgctcagcc tggcaatgtt cagttggtgg ataataaggg
    29521 tcagcgctat accgccgatg acgccgaaga gatgattggc aaattgaccg gaatgccaat
    29581 tccgctcaac agcttgcgcc agtggatttt aggtttaccg ggtgatgcga ctgactacaa
    29641 actggacgat caatatctcc tgagcgaaat tacctacagc cagaatggca aaaactggaa
    29701 agttgtttac ggtggttatg acaccaaaac gcaacctgcg atgccagcca atatggaact
    29761 caccgacggt ggtcaacgca tcaagttaaa aatggataac tggatagtga aataatgcgg
    29821 acacagtggc cctctccggc aaaacttaat ctgtttttat acattaccga tcagcgtgcg
    29881 gatggttacc acacgctgca aacgctgttt cagtttcttg attacggcga caccatcagc
    29941 attgagcttc gtgacgatgg ggatattcgt ctgttaacgc ccgttgaagg cgtggaacat
    30001 gaagataacc tgatcgttcg cgcagcgcgg ttgttgatga aaactgcggc agacagcggg
    30061 cgtcttccga cgggaagcgg tgcggatatc agcattgaca agcgtttgcc gatgggcggc
    30121 ggtctcggcg gtggttcatc caatgccgcg acagttctgg tggcgttaaa tcatctctgg
    30181 caatgcggac taagcatgga tgagctggcg gaaatggggc tgacgctggg cgcagatgtt
    30241 cctgtctttg ttcgggggca tgccgcgttt gccgaaggcg ttggtgaaat actaacgccg
    30301 gtggatccgc cagagaagtg gtatctggtg gcgcaccctg gtgtaagtat tccgacacca
    30361 gtgattttta aagatcctga actcccgcgc aatacgccaa aaaggtcaat agaaacgttg
    30421 ctaaaatgtg aattcagcaa tgattgcgag gttatcgcaa gaaaacgttt tcgcgaggtt
    30481 gatgcggtgc tttcctggct gttagaatac gccccgtcgc gcctgactgg gacaggggcc
    30541 tgtgtctttg ctgaatttga tacagagtct gaagcccgcc aggtgctaga gcaagccccg
    30601 gaatggctca atggctttgt ggcgaaaggt gttaatcttt ccccattgca cagagccatg
    30661 ctttaagccg ggcaagctga gtttcggtga caacgtcacc ttgttccaga cgttgcatcg
    30721 cgctctttaa tacaccgcct ggaaaggatc atgcctggcc cgcacagttt tcggctgatt
    30781 ctttccacca atggacgcat gcctgaggtt cttctcgtgc ctgatatgaa gctttttgct
    30841 ggtaacgcca ccccggaact agcacaacgt attgccaacc gcctgtacac ttcactcggc
    30901 gacgccgctg taggtcgctt tagcgatggc gaagtcagcg tacaaattaa tgaaaatgta
    30961 cgcggtggtg atattttcat catccagtcc acttgtgccc ctactaacga caacctgatg
    31021 gaattagtcg ttatggttga tgccctgcgt cgtgcttccg caggtcgtat caccgctgtt
    31081 atcccctact ttggctatgc gcgccaggac cgtcgcgtcc gttccgctcg tgtaccaatc
    31141 actgcgaaag tggttgcaga cttcctctcc agcgtcggtg ttgaccgtgt gctgacagtg
    31201 gatctgcacg ctgaacagat tcaggggttc ttcgacgttc cggttgataa cgtatttggt
    31261 agcccgatcc tgctggaaga catgctgcag ctgaatctgg ataacccaat tgtggtttct
    31321 ccggacatcg gcggcgttgt gcgtgcccgc gctatcgcta agctgctgaa cgataccgat
    31381 atggcaatca tcgacaaacg tcgtccgcgt gcgaacgttt cccaggtgat gcatatcatc
    31441 ggtgacgttg caggtcgtga ctgcgtactg gtcgatgata tgatcgacac tggcggtacg
    31501 ctgtgtaaag ctgctgaagc tctgaaagaa cgtggtgcta aacgtgtatt tgcgtacgcg
    31561 actcacccga tcttctctgg caacgcggcg aacaacctgc gtaactctgt aattgatgaa
    31621 gtcgttgtct gcgataccat tccgctgagc gatgaaatca aatcactgcc gaacgtgcgt
    31681 actctgaccc tgtcaggtat gctggccgaa gcgattcgtc gtatcagcaa cgaagaatcg
    31741 atctctgcca tgttcgaaca ctaatcgaac ccggctcaaa gacccgctgc ggcgggtttt
    31801 tttgtctgta atatccattt gtatgaccta tgcctccttc acctgccatt tagttgacag
    31861 atgatgcgct cacggatgaa acattattgt gaacaaaata ttttcctcac atgtgatgcc
    31921 tttccgcgct ctgatcgacg cttgctggaa agaaaaatat actgccgcac ggtttacccg
    31981 tgacctgatt gccgggataa ccgtcgggat tattgctatc ccgctggcga tggcgttggc
    32041 tattggtagt ggtgtggcac cccagtacgg tttatatacc gcagttgttg cggggattgt
    32101 cattgctctg acgggtgggt cacgctttag cgtttccggt ccgactgcgg catttgtggt
    32161 aattctctat cccgtgtcgc aacagtttgg actggcagga ctgctggttg cgaccttgct
    32221 gtcggggatc tttttgattc tgatgggtct ggcacgcttt ggtcgcctga ttgagtatat
    32281 tccggtttcc gtcaccttag gtttcacctc gggtatcggg atcaccatcg gtaccatgca
    32341 gattaaagat tttctcggtc tgcaaatggc ccatgtcccg gaacattatc tacaaaaagt
    32401 cggcgcatta tttatggcgc tgccgaccat taatgtgggt gatgctgcca ttggcattgt
    32461 gacgctaggt attcttgttt tctggccgcg tctgggcatt cgtttacccg gtcaccttcc
    32521 ggccttgctg gctggttgcg cggtgatggg gattgttaac ctgctcggcg gacatgttgc
    32581 taccatcggt tcgcaattcc actacgtcct ggccgatggt tctcagggta acggtattcc
    32641 gcaactgctg ccgcaactgg agctgccgtg ggatctgcct aattcagaat tcacgctaac
    32701 ctgggattct attcgcacac tgctgcctgc ggcattctca atggcaatgc tcggcgcaat
    32761 cgaatctctg ctctgcgccg tggtgctgga tggtatgacc gggacgaaac acaaggcgaa
    32821 tagcgaactg gttggacagg ggctggggaa tatcatcgct ccgttctttg gtggtattac
    32881 cgctacagct gccatcgcgc gttctgccgc taacgtccgt gccggggcaa cttcccctat
    32941 ctcggcggtg atccactcta ttctggttat tcttgccctg ctggtactgg caccgctgct
    33001 ctcctggctg ccgctttccg ctatggcagc cctgctgttg atggtagcgt ggaacatgag
    33061 tgaagcgcat aaagtggtcg acttgctgcg tcatgcaccg aaagatgaca tcattgtcat
    33121 gctgttatgc atgtcgctga ccgtgctgtt tgatatggtt attgccatca gcgtggggat
    33181 cgtgctggca tcgctgctgt ttatgcgtcg tatcgcacgt atgactcgcc tggcaccggt
    33241 agtcgtagac gttccagacg atgtcctggt tctgcgcgtt attggcccgc tgttttttgc
    33301 tgccgctgaa ggcttgttca cggacctgga gtcacgtctt gaaggcaaac ggattgtgat
    33361 tctgaagtgg gatgccgttc cggtacttga tgctggtggt cttgatgcgt tccagcgttt
    33421 tgtgaagcgt ctgcccgaag gatgtgaact gcgcgtgtgc aacgtggaat tccagccact
    33481 gcgcactatg gctcgcgcag gcattcaacc gatcccggga cgcctcgctt tcttcccgaa
    33541 tcgtcgcgcg gcgatggcgg atttataact acgagattga ccagtcagcg caaactgact
    33601 ggtcagcaaa ctgcattatt tgttagctat gacggcgatt atcgctacgg cggcaacgtt
    33661 tgtcatagtg gcgaacccac cagtaacggt cgcacacctg ttcatgcccg ccaacacggg
    33721 cacccgccag ccagagaatg gcaccgacga aaatacttag cactgcacca tgtgcgaaat
    33781 actggggcat attaaactgt ggtaactggt tgaggattga ataccccacg ccgaccacca
    33841 ttaccaccag acccaacccc atgagcacgt taccgagtaa cgaagcgttt ttgcgtttca
    33901 tatgtcacct ccggaacttt ctgggttgta acagggaata cccctcttcc ttatgtgtaa
    33961 agtatagaca acaccctgtg ggttatgtgc gggcgtgatc acaattacaa cccttatttc
    34021 aacaaaactt tacaaataaa cgcctgaaca ccttgacttt ctaatagtcc actcaggcaa
    34081 ttattacgtt atctgcattt gatacgcagt tttttgtcaa gcggggccgc aaccagtaaa
    34141 ctacgcgcca gttatgtaca cactcaggac aaaaaaacgt gacgattaaa ttgattgtcg
    34201 gcctggcgaa ccccggtgct gaatacgccg caacgcgaca taatactggt gcctggttcg
    34261 ttgacttact ggcagagcgt ttgcgcgctc cgctgcgcga agaggctaaa ttctttggtt
    34321 atacttcgcg agtcaccctt ggaggcgaag atgtccgcct gttagtcccg actacattta
    34381 tgaatctcag cggcaaagcc gttgcggcga tggccagttt tttccgcatt aatccggacg
    34441 aaattctggt ggcccacgac gaactggatc tgcctcctgg cgtcgccaaa tttaagttgg
    34501 gcggtggcca tggtggtcac aatggactga aagacatcat cagtaaattg ggtaataacc
    34561 ctaactttca ccgtttacgc atcggaatcg gtcatccggg cgataaaaat aaagttgtcg
    34621 gttttgtgtt aggcaaaccg cctgttagtg aacagaagtt aattgatgaa gccatcgacg
    34681 aagcggcgcg ttgtactgaa atgtggttta cagatggctt gaccaaagca acgaaccgat
    34741 tgcacgcctt taaagcgcaa taagtcgttg tctgcggcat ttttgccgag tgccgtgtat
    34801 aataggcaaa gttatttcca tttctgcaat ctgttagcaa taacaggttg attattaaga
    34861 tattaaggtg atttaaatca tgggattcaa atgcggtatc gtcggtttgc ccaacgtcgg
    34921 gaaatctacc ctgttcaacg cgctgaccaa agccggtatt gaagcggcca actttccatt
    34981 ctgcaccatt gagccgaaca caggcgtcgt accaatgcct gaccctcgcc tggatcaact
    35041 ggctgaaatc gtaaaaccgc agcgtacgct tcccacgacc atggaatttg tcgatatcgc
    35101 cggtctggta aaaggcgcat cgaaaggcga aggtctgggt aaccagttcc tgaccaacat
    35161 ccgtgaaacc gaagcgatcg gtcacgttgt tcgctgcttt gaaaatgaca acatcattca
    35221 cgtttccggc aaagttaacc cggctgacga tattgaagtt atcaataccg aactggcgct
    35281 ggcggacctc gacacctgcg aacgtgcgat tcatcgcgta cagaagaaag ccaaaggtgg
    35341 cgataaagac gcgaaagctg agctggcggt cctggaaaaa tgcctgcccc agttggaaaa
    35401 cgcaggtatg ctgcgcgcgc tggatttaag cgctgaagag aaagcggcta ttcgttacct
    35461 gagcttcctg acgctgaaac caacaatgta catcgccaac gtcaacgaag acggttttga
    35521 aaacaaccca tatcttgacc aggtgcgtga aatcgcggcg aaagaaggtt ctgttgtggt
    35581 tccggtttgt gctgctgttg aagcagacat tgccgaactg gacgacgaag aacgtgacga
    35641 gtttatgcag gagcttgggc tggaagagcc gggcctgaac cgtgtgatcc gtgccggtta
    35701 taagctgctg aacctgcaaa cctacttcac cgctggggtc aaagaagtgc gtgcatggac
    35761 cattccggtt ggagcaaccg cgccgcaggc agcgggcaaa atccatactg attttgaaaa
    35821 aggctttatc cgtgcacaaa ccatctcgtt tgaagatttc atcacttaca aaggtgaaca
    35881 aggcgcgaaa gaagcaggca aaatgcgtgc agaaggtaaa gattacatcg tgaaagatgg
    35941 cgatgtgatg aacttccttt tcaacgtcta attaatttat tgtctcatga ggtttcgcta
    36001 aatctcatga agagcgcaaa agtatataaa atccacgcaa ttgcgtggat ttttcatttc
    36061 accgagtcct aatcattctt gtaacatcct acacttttgt gcttattgcc tacagtgaac
    36121 cacgagaata attaaagaca taagtgttca gatgactgat atctcattag cagtgatata
    36181 acgtcagttt ttgttccact acacatcagc cctcttcaca actgatcaat attgatctcg
    36241 ctccaatatg ctggcgagaa aaggacttac ctgaagggta atatcccgca gataaagtcc
    36301 ccgaataacg tgattacgtg cgatcctgac aagatgaaaa tgataaccag tagcacaata
    36361 ataacgatag gccagaaaac ccattgacca aaaatgaata tcgatgtttt ttgctttttc
    36421 ttattagtaa tgcaaaaatg gcacataatg ttttttgtta tgcagataca tcaagcgaaa
    36481 atcccataac taattaggat tattaccaaa aatattcacc aattttttta tcgctgtttg
    36541 ttgtaatatt ttttgtcata ttcatagtaa cgaattggaa taagtaacga caacttaggg
    36601 aataactcga tataaactca cctttgtaag ggggatgtta aatatatatt aattcctgtg
    36661 ttcctgattt tgcccggtaa tagagaatta ttctcagaga agctcatcat gattgcacca
    36721 tacagatatc atgatgataa gaggatatta ttcattgact taaacaaaat gacaaaatcc
    36781 atagacccat agcctgggta ctatatagga gtggtatggg catcaaacaa cacaatggga
    36841 ataccaaagc cgatcgtctc gctgaattaa aaatccgttc gccctcaatt caactgataa
    36901 aatttggcgc tattggtttg aatgcaatta tcttttcccc cctgctgata gctgctgata
    36961 caggaagtca atatggcacc aatattacta ttaatgatgg tgacagaatt acaggagata
    37021 ccgccgatcc atcaggaaac ctctatggtg taatgacccc agcaggaaac acgcctggca
    37081 atatcaacct aggtaatgat gtcaccgtca atgtcaacga cgcctctgga tatgcaaaag
    37141 gaatcattat tcagggcaaa aacagctccc tgacagctaa ccgactcaca gtagatgttg
    37201 ttggtcaaac ctctgccatc ggcattaact taattggtga ctatacccat gctgacttag
    37261 gcacaggcag caccattaag agtaacgatg acggcatcat tattgggcat agctcaacac
    37321 taacagccac tcaattcacc attgaaaact cgaacggtat aggcctaacc atcaatgact
    37381 atggcaccag tgtcgatctt ggaagcggaa gtaaaatcaa gaccgatgga agtacaggtg
    37441 tttatatcgg tggtctcaac ggcaataacg ccaatggtgc tgcgcgtttt acggcgacag
    37501 acctgacaat cgatgttcag ggctacagcg ccatggggat aaacgtacag aaaaactctg
    37561 ttgtcgatct cggaacaaac agtaccatta aaaccaatgg cgataatgct cacggcctct
    37621 ggagctttgg ccaggttagc acgaatgcac tcactgttga tgtaactgga gccgcggcca
    37681 atggcgtcga agttcgtggt ggtacaacca ctatcggtgc agatagccat atttcttccg
    37741 cgcagggcgg tggcctcgtc accagtggtt cagacgcgac aatcaatttt tctggcacgg
    37801 cagcgcaacg aaacagcatc ttttccggcg gttcttatgg tgcatcagcc cagacggcaa
    37861 cggctgttat caacatgcaa aataccgata ttacggttga tcgtaatggc agtctggcgc
    37921 taggtttgtg ggcgctcagc ggcggtagaa taaccggaga cagtttggct atcaccggcg
    37981 cggcaggagc caaggggatt tatgccatga ccaacagcca gatcgatctc acgagcgatc
    38041 tggtcattga tatgagtaca cccgaccaga tggccatcgc aacgcaacat gacgatggtt
    38101 atgccgccag ccgcatcaac gcctcgggtc ggatgcttat caacggtagc gttctttcca
    38161 aaggtgggct aatcaatctg gatatgcacc ctgggtcggt ttggacaggt tcctccctca
    38221 gcgataattt caatggcggg aaactggacg ttgcaatgaa taacagcgtc tggaacgtaa
    38281 caagtaattc taatctcgac acgctggcgc tgagccattc aactgtcgat tttgccagct
    38341 acgggtcaac tgccggcaca ttaaccacat taaacgtaga gaacctgagc ggtaacagta
    38401 cctttattat gcgtgctgat gttgttggcg agggtaatgg cgttaataat aaaggggatt
    38461 tattgaatat cagcgggagt agtgctggta atcacgtatt ggctatccgt aaccagggca
    38521 gcgaggccac aacgggaaat gaagttctga cagtggtaaa aaacactgat ggcgcggcct
    38581 ctttcagcgc gtcttctcag gttgagttgg gaggatatct gtacgatgtg cgtaaaaatg
    38641 gcactaactg ggagctttat gcttccggga caattccgga gccgactcca aatcctgaac
    38701 caacgccggc tcccgctcag cctcccatag tcaaccccga tcctacgcct gaacccaatc
    38761 ctacgccaac ccccactccc gcacctaaac ccaccacgac cgcagatgct ggcggcaatt
    38821 atctcaatgt cggttattta ttaaactatg ttgaaaaccg tacgctgatg caacggatgg
    38881 gtgacctgcg aaatcagagt aaaaacggtg atatctggct gcgcagttat gggggaagcc
    38941 tggactcctt cgccagtggc aaactgagcg gctttgacat gggttacagc ggtatccagt
    39001 ttggtgggga taaacgtctc tctgatgtaa tgccgttgta tgtcggtctg tatattggct
    39061 caacacatgc atcgccggac tataacggag gcgacggtac cgcacgttca gactacatgg
    39121 gaatgtacgc cagttacatg gcacacaacg gtttttacag cgatctcgtt gtaaaagcat
    39181 cgcgccagaa aaatagtttc cacgtactgg acagtcagaa caacggcgtt aacgccaacg
    39241 gcactgcgaa tggattgagt atctccctgg aagccgggca gaggttcaac ctgaccccta
    39301 ctggttatgg gttctatata gagccgcaaa cccagctcac atacagccac cagaatgaga
    39361 tggctatgaa ggcgagtaat ggtctcaata tacatctgaa tcactacgaa tcgctgctgg
    39421 gacgtgccag catgatactg ggatatgaca tcaccgcagg caacagccag ctgaatatct
    39481 atgtgaagac tggcgctatc cgcgagtttt caggggatac agaatacctg ttgaacaact
    39541 cccgggagaa gtacagtttc aaaggtaatg gctggaataa cggcgtggga gtcagtgcac
    39601 agtataacaa acagcacaca ttctacctcg aagcggatta cacgcagggt aacctctttg
    39661 atcagaagca agtcaacgga ggatatcgtt tcagctttta agtgcgggat agacaagccc
    39721 ttaaacgatg ctgaaaattg ttagcgtgcg ccggaatgaa atacagatca ctctgatgta
    39781 tcagaaatcg tttctgtctt tcatacccgg cgcttaaact gccctgcatc aatgccatgt
    39841 tgcttcattt tccgccacag cgtagtgcgg ccgatcccaa gtaaagccga catttcctga
    39901 atgcgaccgc ctgtgacctg ggctgcgtta ataattgcct ctttttcaac ttccgcaaat
    39961 gacagactgg tggaaaggcg ggtggcgctg acatcatctg tcgcatgctc ggtaaacaga
    40021 tgttcaggta aatcactgac gcgaatgcgc ccgttatcac tactcagagc aagattctcg
    40081 atgacgctgt aaagttcaaa atcgttgcct ggccatgcac aagaaaccag gcgagcgagg
    40141 gcattgtcat caattttcag ccgcgtagag aagcgttttt caagactgcg taatttgtta
    40201 ttcaccagcg ccggaatgct gccacgccgc atacgcagag gcgggatggt aatttcaaat
    40261 gcatgcagcg cgtaatacag ctggcgacta aaacgatttt gttccaccag cattgcgagg
    40321 tccgcggtcg ttgttgcaat cactttgaca tcaattggta ttaaacgccg cgcatccagt
    40381 cgcgtgataa caccctgctt gataacctga agcaaagcag actgtaactc caccgccaga
    40441 tattcaatct tttcaagaaa cagcgtgccg ccgtgtgcca gttccagccg actcagacgg
    40501 ccattttcat tgtccgtgcg atcgccacca ataaattctt ccgccagcgc cgcatcacca
    40561 tataactcac aattgacggc gatataagga cctgcagcac gctcgctttc attatgaatt
    40621 gcctgactta gcagtgcctt gcccacgccc tcttctccac aaagcaggac aggaaagcta
    40681 ctgcgcgccg cctggcgacc aaaatgaatc aagcggcggg tttgcggatc gtcctgtggc
    40741 atatgagcga aggtatggct gacttttcct aattgactgg tcattaactg ccgcatctgt
    40801 tccacaggat ggagcaacaa aataaagctg gttccctgcg tttctattat cggtttaagg
    40861 gttatcaccg catcaataaa ctgatgctga ctttcaaagg ttgcttctac gtgtttgagc
    40921 ggatgtgcct gttttattgc ttgttgcaat acggcgggta acgttaagag ttcagtgatt
    40981 gcccgtccct gacttgccgt cacgtcaagg cgcaagaccc gcgccgcctg ggcattaata
    41041 aattgcaaat taccctgctc gtcccagcta atcacgccat catccatact ttctaacagg
    41101 gcattaagtt gatttaaatg acggttagtt tcagcgagca aactgtccgt cagcagtaaa
    41161 ttaccgacct cgcgggcgat tgctaacgtc aacggcaaat cagctgcggt agtttgctca
    41221 accggacacg ccagcgctat tgttcccgtc aatcggccct tgctgtcaaa caacggcgtt
    41281 gcacaaaagg cccagttcca gagtgcctgt ttgaaatgtt gatcggccat cgttttcacg
    41341 gcctgaccag agatagccgc taacgatagc gcacaagtac caataattcc ctcggcgcaa
    41401 tacgtgccgt catggaatcc aagtgcactt agctgctgca aggtttgcgg atcgccatta
    41461 cggctgagaa tgcaggcggt ttcatcgagg ataaacagcg cacactctcg cggtgccata
    41521 tattcccagg catcttccag cgctgcctgc ccgagcgtca gcatcgcttt cttacgccga
    41581 taaatagaag caaatgtcac gccctaggcc tgatgtggta cgttccatgt ctcccgtttc
    41641 atcagcttat tgcatcgctc ccaggaggtt gcaattaagg gagatatgcc ccgaccatcg
    41701 ttgttaaaag cgccactcat atcccgcatc ccttatgaca aaaggtgttc cggctcgcaa
    41761 ttttaagtat taatacacgt aaaagtttca atatggaaca ttcattaaag catatgtttc
    41821 actatgaaac ataatttgag ctaattttct tttcccttgc ctgatgcaca atggattcat
    41881 cggcagtcag tggtcgccgt gtcgttgaac atcatccatg ccctaccgta attgctggag
    41941 caaaataatg aaaaaattga tcaatgatgt gcgagacgta ctggacgaac aactggcagg
    42001 actggcgaaa gcgcatccat cgctgacact gcatcaggat ccggtgtatg tcacccgagc
    42061 tgatgcccct gttgcaggaa aagtcgccct gctgtctggt ggcggcagcg gacacgagcc
    42121 gatgcactgt ggttatatcg gtcaggggat gctttcgggg gcctgtccgg gcgaaatttt
    42181 cacctcaccg acgcccgata aaatctttga atgcgccatg caaattgatg gcggcgaagg
    42241 tgtactgttg attatcaaaa attacaccgg cgatattctt aactttgaaa cagcaaccga
    42301 gttactacac gatagcggcg taaaagtgac cactgtggtc attgatgacg acgttgcagt
    42361 aaaagacagt ctttataccg ccgggcgacg cggcgttgcc aacaccgtat taattgaaaa
    42421 actcgtaggc gcagcggcgg agcgtggcga ctcactggac gcctgtgcgg aactggggcg
    42481 taagttgaat aatcaaggcc actcaatagg tatcgctctc ggtgcctgta ccgttcctgc
    42541 cgcgggcaaa ccttctttta ccctggcgga caatgagatg gagtttggcg tcggcattca
    42601 tggtgagccg ggtattgacc gccgcccctt ctcttccctt gatcaaaccg tcgatgaaat
    42661 gttcgacacc ctgctggaaa atggctcata ccatcgcact ttgcgtttct gggattatca
    42721 acaaggcagt tggcaggaag aacaacaaac caaacaaccg ctccagtctg gcgatcgggt
    42781 gattgcgctg gttaacaatc ttggcgcaac tccgctttct gagctgtacg gcgtctataa
    42841 ccgcctgacc acacgttgcc agcaagcggg attgactatc gaacgtaatt taattggcgc
    42901 gtactgcacc tcactggata tgaccggttt ctcaatcacc ttactgaaag ttgatgacga
    42961 aacgctggca ctctgggacg ccccggtcca caccccggcc cttaactggg gtaaataagg
    43021 agaaagcaat gtcactgagc agaactcaaa ttgttaactg gctcactcgt tgtggcgata
    43081 ttttcagcac cgagagcgag tatcttaccg gactggatcg cgaaattggc gacgctgacc
    43141 acgggctaaa tatgaaccga ggctttagca aagtggtgga aaaactccct gctatcgcag
    43201 ataaagatat cggtttcatt ctcaagaata ccggtatgac gctgctttcc agcgtcggtg
    43261 gtgccagtgg tccgctgttc ggtaccttct ttatccgcgc cgcacaggcg acccaggcac
    43321 ggcaaagcct gacactggaa gagctttatc agatgttccg cgatggcgcg gacggcgtaa
    43381 tcagtcgcgg gaaagccgaa cctggcgata aaaccatgtg tgatgtgtgg gtgccggtgg
    43441 tggaatcgtt acgtcagtcc agcgagcaaa atctctctgt tccggtggcg ctcgaagctg
    43501 ccagtagcat cgccgaatcc gctgcacaaa gtacgattac gatgcaagcc cgcaaaggcc
    43561 gcgccagtta tctcggtgaa cgcagtattg gtcaccagga tcccggcgcg acctcggtga
    43621 tgtttatgat gcaaatgttg gcgttagccg caaaagagta aggaattggt gatggtaaac
    43681 ctggtcatag tttcacatag cagccgactg ggagaaggtg tcggtgaatt agcccgtcag
    43741 atgttaatga gtgatagttg taaaatcgcc attgccgcgg gaattgacga tccacaaaat
    43801 cccattggta ccgatgccgt caaagtgatg gaggccatcg aatctgttgc tgatgccgac
    43861 catgtgctgg tcatgatgga tatgggtagc gcattattga gtgctgaaac tgcgctggaa
    43921 ttgctggctc ccgagatcgc cgcaaaagta cgtttgtgtg ctgcgccgtt ggtcgaaggt
    43981 acactggcag caacggtcag cgcggcctcg ggggcggata tcgacaaagt tatctttgac
    44041 gccatgcatg cgctggaagc caaacgtgaa caactgggtt taccgtcctc cgacactgaa
    44101 atctctgaca catgtcctcc gtacgatgaa gaagcccgtt ctctggcggt ggtcataaag
    44161 aaccgtaacg gtctgcatgt acgtccagcc tcccggctgg tttatacctt atcgacattt
    44221 aatgccgata tgttgctgga aaaaaacggc aaatgcgtca caccggagag tattaaccag
    44281 attgcgttac tacaagttcg ctataacgat acgctgcgcc tgattgcgaa agggccagaa
    44341 gctgaagagg cactgatcgc tttccgtcag ctggctgaag ataactttgg tgaaatggag
    44401 gaagttgctc cacctactct gcgtcccgtt ccgcctgttt cgggtaaagc cttttattat
    44461 caaccggttt tatgtacggt acaggccaaa tcaaccctga ccgtggaaga agaacaagaa
    44521 cgattacgcc aggccattga cttcacgtta ttagatctga tgacgttaac agcgaaagca
    44581 gaagccagcg ggcttgacga tattgccgca atcttttctg gtcaccatac actgttagat
    44641 gatccggaac tgctggcggc ggcaagcgaa ctccttcagc acgaacattg cacggcagaa
    44701 tatgcctggc agcaagttct taaagaactt agccagcaat accagcaact ggatgatgaa
    44761 tatctacaag ctcgctatat tgatgtggac gatcttctgc atcgcaccct ggtccacctg
    44821 acccaaacga aagaagaact cccgcagttt aactcgccaa ctattctact ggcggagaac
    44881 atttatcctt ccacagtact gcaactggat ccggcggttg taaaaggtat ctgccttagc
    44941 gccggaagtc cggtatccca cagcgccctg atcgcccgtg aactggggat tggctggatt
    45001 tgccagcagg gtgagaaact gtatgcgata caaccagaag aaacgctaac gctggacgtt
    45061 aaaacgcaac gtttcaaccg tcagggttaa gcca
//
LOCUS       DAJVTL010000019        44331 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.019, whole genome shotgun sequence.
ACCESSION   DAJVTL010000019 DAJVTL010000000
VERSION     DAJVTL010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 44331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44331
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.019"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(20..877)
                     /gene="murI"
                     /locus_tag="OQQ26_000994"
     CDS             complement(20..877)
                     /gene="murI"
                     /locus_tag="OQQ26_000994"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HCS1856535.1"
                     /translation="MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLL
                     PDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA
                     LREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
                     GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFE
                     TLEKLAVLG"
     gene            complement(822..2666)
                     /gene="btuB"
                     /locus_tag="OQQ26_000995"
                     /pseudo
     CDS             complement(822..2666)
                     /gene="btuB"
                     /locus_tag="OQQ26_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418401.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
     regulatory      complement(2731..2921)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3035..4135
                     /gene="trmA"
                     /locus_tag="OQQ26_000996"
     CDS             3035..4135
                     /gene="trmA"
                     /locus_tag="OQQ26_000996"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HCS1856536.1"
                     /translation="MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHY
                     RMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELY
                     CGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLE
                     TLSQTHKVERLALFDQFPYTHHMECGVLLTAK"
     gene            complement(4175..4534)
                     /locus_tag="OQQ26_000997"
     CDS             complement(4175..4534)
                     /locus_tag="OQQ26_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HCS1856537.1"
                     /translation="MKQSNQDKGTLLLALVAGLSINGTFSALFSSIVPFSVFPIISLV
                     LTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIM
                     VFWIGAKMRNRKQEVAE"
     gene            complement(4534..5184)
                     /gene="fabR"
                     /locus_tag="OQQ26_000998"
     CDS             complement(4534..5184)
                     /gene="fabR"
                     /locus_tag="OQQ26_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HCS1856538.1"
                     /translation="MMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQDKTAIIPGNVKDE"
     gene            complement(5288..6604)
                     /locus_tag="OQQ26_000999"
     CDS             complement(5288..6604)
                     /locus_tag="OQQ26_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1856539.1"
                     /translation="MTAIVNETVSVKKKPSGRRVIFASAFGNALEFFDFGVYNFFVVY
                     ISTLFFPPSADHNVALLLAFATFGVSFFMRPLGGIIVGAWADRFGRKPAMVFTIALMS
                     LGTLMIGIAPTYATAGYWGTATLVLARLIQGVAAGGEVGASMSLLVESAPANRRGFYS
                     SWSLATQGLATTFGGVVALGLSAWLPFATGSETVMAEWGWRVPFFIGVLLAPIGCWLR
                     LSLENDVPEPVRNKKAATSESAFSLLLQHKATIVNGVLLAIGSTVATYISLFYYGTWA
                     AKYLAMPQHYSHAAMLLAGVITFVGALLVGMLCDSVGRKKLILISRVMVLICSWPSFW
                     LLVNYPSPGMLLTVVFVMVSFTTLGGVPVMLLISELLPKRIRALGFALVYSIGVAIFG
                     GFAQYFATQSIVLLDSLTAPAWYLGGGTLLSMLALLYVKEPAKELQ"
     gene            complement(6648..7805)
                     /locus_tag="OQQ26_001000"
     CDS             complement(6648..7805)
                     /locus_tag="OQQ26_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HCS1856540.1"
                     /translation="MIEHYIRGFEEELREIRHQIHENPEQGLQEFKTSALVAEKLRQW
                     GYEVEQGLATTGIVATLKVGDGEKSIGLRVDMDALPIYENSGKPWASKHPGLMHACGH
                     TTILLGAARYFAETRRFNGTLRLIFQPAEEMINGGEIMVKEGLFDRFPCDVIFGMHNM
                     PGLPVGKFYFQPGALMASMDQFHITVRGCGGHGAIPHKAIDPVLVAAHIATALQSIVS
                     RNVDPLEAAVITVGSIVAGEAANVIPDSAEMKISVRSLSRDTRQLLLTRIPALAQAQA
                     ASFGATAEVTHVNGTPVLVNDEEMARFAWQVACKTFGEERAEFGIKPLMGSEDFSFML
                     EAQPKGGFLLFGNGDAGEGSCMVHNPGYDFNDASLVPASSYWGALVEAWLQ"
     gene            8135..9535
                     /gene="sthA"
                     /locus_tag="OQQ26_001001"
     CDS             8135..9535
                     /gene="sthA"
                     /locus_tag="OQQ26_001001"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418397.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HCS1856541.1"
                     /translation="MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTH
                     PRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            complement(9518..10435)
                     /gene="oxyR"
                     /locus_tag="OQQ26_001002"
     CDS             complement(9518..10435)
                     /gene="oxyR"
                     /locus_tag="OQQ26_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HCS1856542.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
                     PYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPL
                     FDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGS
                     PLRSRYEQLAEAIRARMDGHFDKVLKQAV"
     gene            complement(10702..12075)
                     /gene="argH"
                     /locus_tag="OQQ26_001003"
     CDS             complement(10702..12075)
                     /gene="argH"
                     /locus_tag="OQQ26_001003"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HCS1856543.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     ASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDT
                     WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEELPLTELQKFSQVIGEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIA
                     FAQARLG"
     gene            complement(12136..12912)
                     /gene="argB"
                     /locus_tag="OQQ26_001004"
     CDS             complement(12136..12912)
                     /gene="argB"
                     /locus_tag="OQQ26_001004"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HCS1856544.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGL
                     FLGDGDSVKVTQLDEELGHVGLAQPGSPKLINTLLENGYLPVVSSIGVTDEGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTTAKAEQLIEQGIITDGMIVKV
                     NAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA"
     gene            complement(12920..13924)
                     /gene="argC"
                     /locus_tag="OQQ26_001005"
     CDS             complement(12920..13924)
                     /gene="argC"
                     /locus_tag="OQQ26_001005"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HCS1856545.1"
                     /translation="MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL
                     ISDLHPQLKGIVDLPLQPMSDISEFSPGGDVVFLATAHEVSHDLAPQFLEAGCVVFDL
                     SGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ
                     LALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     ATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI
                     "
     gene            14078..15229
                     /gene="argE"
                     /locus_tag="OQQ26_001006"
     CDS             14078..15229
                     /gene="argE"
                     /locus_tag="OQQ26_001006"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HCS1856546.1"
                     /translation="MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFK
                     DLGFNVEVQPVPGTRNKFNMLASCGQGAGGLLLAGHTDTVPFDDGCWTRDPFTLTEHD
                     GKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTAL
                     RPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQ
                     LRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNG
                     LLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEA
                     PFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVIHHFCWH"
     gene            15581..18232
                     /gene="ppc"
                     /locus_tag="OQQ26_001007"
     CDS             15581..18232
                     /gene="ppc"
                     /locus_tag="OQQ26_001007"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004203687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HCS1856547.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS
                     SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ
                     LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
                     DLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL
                     KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAE
                     TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK
                     TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
                     EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDLYRGYVRENKDFVPYF
                     RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
                     VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL
                     RNLQEEDIKVVLAIANDSHLMADLPWIAKSIQLRNIYTDPLNVLQAELLHRSRQAEKE
                     GQEPDPRVEQALMVTIAGIAAGMRNTG"
     gene            18414..20147
                     /locus_tag="OQQ26_001008"
     CDS             18414..20147
                     /locus_tag="OQQ26_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HCS1856548.1"
                     /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN
                     GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF
                     VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL
                     YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE
                     NNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT
                     VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQEVLNDPAPKKLIIVHLLGT
                     HIKYKYRYPENQGKFDGNTDHVPPGLSAEELESYNDYDNANLYNDHVVASLIKDFKAA
                     DPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS
                     QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD
                     TLPYGEQVGNQ"
     gene            20296..21105
                     /locus_tag="OQQ26_001009"
     CDS             20296..21105
                     /locus_tag="OQQ26_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1856549.1"
                     /translation="MYHDVSYLLSRLINGPVPDLAYQVDSPRLEIVLEGEFVDTGAGA
                     TLVPGDVLYVAAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR
                     RGPLIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAI
                     RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG
                     YDLKVKEVAHAYGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE"
     gene            complement(21092..21433)
                     /locus_tag="OQQ26_001010"
     CDS             complement(21092..21433)
                     /locus_tag="OQQ26_001010"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HCS1856550.1"
                     /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALG
                     TENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVL
                     SAPQQTHLILE"
     gene            complement(21435..22313)
                     /locus_tag="OQQ26_001011"
     CDS             complement(21435..22313)
                     /locus_tag="OQQ26_001011"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312908.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[formate-C-acetyltransferase]-activating enzyme"
                     /protein_id="HCS1856551.1"
                     /translation="MTSSAGQRISCNVVETRRNDVARIFNIQRYSLNDGEGIRTVVFF
                     KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA
                     LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
                     KLLPLAKLCDEVLFDLKIMDATQAWDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPS
                     FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVTT
                     MREMAERAGFQVTVGG"
     gene            complement(22279..24576)
                     /locus_tag="OQQ26_001012"
     CDS             complement(22279..24576)
                     /locus_tag="OQQ26_001012"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HCS1856552.1"
                     /translation="MTNRISRLKTALFANICEISLERALLYTASHRQTEGEPVILRRA
                     KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA
                     ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIID
                     YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAELAETMAANCT
                     DAQRREELLTIAEISRHNAEHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM
                     LPFYQASLTQGEDAAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT
                     ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRLGTGIPQIF
                     NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN
                     EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR
                     DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEDE
                     KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP
                     LGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTAVLKSVSKLDNTLLSNGTLLNVK
                     FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLREAQQRPQDYAGLVVRVA
                     GYSAFFVELSKEIQDDIIRRTAHQL"
     gene            complement(24627..24947)
                     /locus_tag="OQQ26_001013"
     CDS             complement(24627..24947)
                     /locus_tag="OQQ26_001013"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HCS1856553.1"
                     /translation="MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIG
                     LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL
                     AQTA"
     gene            complement(24962..26041)
                     /locus_tag="OQQ26_001014"
     CDS             complement(24962..26041)
                     /locus_tag="OQQ26_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIC"
                     /protein_id="HCS1856554.1"
                     /translation="MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGA
                     VPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAG
                     FFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGA
                     LTNSMTQWLQGMQQGSIVMLAVIMGLMLAFDMRGPVNKVAYAFMLICVAQGVYTVVAI
                     AAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVI
                     PSIMIGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVL
                     KSLARKNGSSTDEKEDDLDLDFEIN"
     gene            26350..28851
                     /gene="ptsP"
                     /locus_tag="OQQ26_001015"
     CDS             26350..28851
                     /gene="ptsP"
                     /locus_tag="OQQ26_001015"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HCS1856555.1"
                     /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDHK
                     GNAKSALALIGTDTLAGDNCRLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE
                     LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALGNLPAAKDVDAEQSALE
                     NGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLHEHLLAGVSAGLSCAEAIVAS
                     ANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQSAICMADELT
                     PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDG
                     NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE
                     AQAAFVNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG
                     DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSM
                     EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCFEEIDFFSISSN
                     DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL
                     PLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRQLLNQAMACRTSLEVEHLLAQFRI
                     TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST
                     GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF
                     SRLARRIMHEEFRNALVNAASADAIASLLQHELEL"
     gene            28863..29525
                     /gene="fsa"
                     /locus_tag="OQQ26_001016"
     CDS             28863..29525
                     /gene="fsa"
                     /locus_tag="OQQ26_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HCS1856556.1"
                     /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLP
                     RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKE
                     GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQTLLEMHAPES
                     MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT
                     HL"
     gene            29536..30639
                     /gene="gldA"
                     /locus_tag="OQQ26_001017"
                     /pseudo
     CDS             29536..30639
                     /gene="gldA"
                     /locus_tag="OQQ26_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418380.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional L-1,2-propanediol
                     dehydrogenase/glycerol dehydrogenase"
     gene            30914..31531
                     /locus_tag="OQQ26_001018"
     CDS             30914..31531
                     /locus_tag="OQQ26_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HCS1856557.1"
                     /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR
                     QQIGSTLFYDPAYMQLTYPGGDVPQERGVCSDVVIRELRSQKVDLQKLVHEDMAKNFA
                     DYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
                     HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK"
     gene            complement(31558..32463)
                     /gene="yijE"
                     /locus_tag="OQQ26_001019"
     CDS             complement(31558..32463)
                     /gene="yijE"
                     /locus_tag="OQQ26_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine transporter YijE"
                     /protein_id="HCS1856558.1"
                     /translation="MSAAGKSNPLAISCLVVLTLIWSYSWIFMKQVTSYIGAFDFTAL
                     RCIFGALVLFIVLLLRGRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAIL
                     SYTMPFWVVIFAAVFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILS
                     GVSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTAFW
                     ALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGS
                     GIVLIVLALALVSRKKKEAVSVKRI"
     gene            complement(32521..34701)
                     /gene="katG"
                     /locus_tag="OQQ26_001020"
     CDS             complement(32521..34701)
                     /gene="katG"
                     /locus_tag="OQQ26_001020"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HCS1856559.1"
                     /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG
                     PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI
                     IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR
                     ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI
                     EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTVPEMTALVGGMRVLGANFD
                     GSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASHADL
                     VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDML"
     gene            complement(35030..35920)
                     /gene="metF"
                     /locus_tag="OQQ26_001021"
     CDS             complement(35030..35920)
                     /gene="metF"
                     /locus_tag="OQQ26_001021"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HCS1856560.1"
                     /translation="MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            35996..36241
                     /locus_tag="OQQ26_001022"
     CDS             35996..36241
                     /locus_tag="OQQ26_001022"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856561.1"
                     /translation="MKEKPKGVNRKMTNDGEEKSGKMKKLQDGKKKKIRYEKQTGLQI
                     LTNHVLIASCRIRRKRFIRPNPMIIQYISLETIDPKT"
     gene            complement(36269..38701)
                     /gene="metL"
                     /locus_tag="OQQ26_001023"
     CDS             complement(36269..38701)
                     /gene="metL"
                     /locus_tag="OQQ26_001023"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HCS1856562.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAF
                     VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE
                     RAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
                     SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAH
                     KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA
                     LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ
                     SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
                     GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF
                     HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL
                     SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR
                     EAGYNIEPDQVRVESLVPTHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVA
                     RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
                     IQSDINRLAQLL"
     gene            complement(38704..39864)
                     /gene="metB"
                     /locus_tag="OQQ26_001024"
     CDS             complement(38704..39864)
                     /gene="metB"
                     /locus_tag="OQQ26_001024"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HCS1856563.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC
                     HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV
                     VTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            40141..40458
                     /gene="metJ"
                     /locus_tag="OQQ26_001025"
     CDS             40141..40458
                     /gene="metJ"
                     /locus_tag="OQQ26_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HCS1856564.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET
                     WEY"
     gene            40642..41251
                     /locus_tag="OQQ26_001026"
                     /pseudo
     CDS             40642..41251
                     /locus_tag="OQQ26_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312893.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX family permuted papain-like enzyme"
     gene            41396..41676
                     /locus_tag="OQQ26_001027"
                     /pseudo
     CDS             41396..41676
                     /locus_tag="OQQ26_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(41685..42821)
                     /locus_tag="OQQ26_001028"
     CDS             complement(41685..42821)
                     /locus_tag="OQQ26_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HCS1856565.1"
                     /translation="MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGW
                     EDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDD
                     KDVIAIDGKTLRHSHDKSRRRGAIHVISAFSTMHSLVLGQIKTDEKSNEITAIPELLN
                     MLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNP
                     EHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKE
                     PEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFS
                     GIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS"
     gene            42966..43372
                     /locus_tag="OQQ26_001029"
                     /pseudo
     CDS             42966..43372
                     /locus_tag="OQQ26_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(43545..43781)
                     /locus_tag="OQQ26_001030"
     CDS             complement(43545..43781)
                     /locus_tag="OQQ26_001030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856566.1"
                     /translation="MKAIQCCYFLALVSSNLMAGVMGDDNIFLSNSDSAALYCVAKIF
                     PDGENILIYKVNIINASSKKDVFFMKAQHQPTMT"
     gene            complement(43783..>44331)
                     /locus_tag="OQQ26_001031"
     CDS             complement(43783..>44331)
                     /locus_tag="OQQ26_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
                     /protein_id="HCS1856567.1"
                     /translation="LQGRYITQDPIGLKGGWNLYTYPLSPVNSMDPLGLYEFKSKNID
                     DIGIFALAMCNGESINENKEYGGLICKKQGEYFPMNPISSNDNDSVDLRNIKCPEGSE
                     RVGDYHTHGFYSDDKGNKVTKENDVYDSLNFSSKDLTNSYMNGMGKKEYSSYLGTPNN
                     TYLKYNPKAKGNGVAIIRQGSN"
BASE COUNT        11020 a        12158 c        10829 g        10324 t
ORIGIN      
        1 cgcgcaacat tcaaccaaat cagcctaaaa ctgccagttt ttcgagcgtt tcgaagccgt
       61 aacgctgtaa aacgggcaat aattgttcag cttctggcgt cattgccata caaaaggcaa
      121 tattcgcatc agcagatttt gcatccgggg cttcatgttc taacaaccaa gccgttcggc
      181 gagcaatcgc tgcgccagaa tccaccagcc gggtcccctc tggcagcact tgtaacagtt
      241 cttcttgtag tagagggaaa tgggtgcaac ccaatacaac ggtatctggc ggctctttca
      301 ttcttaacca cgggcgtagg atacgtttta gtgcatccag agaaacatct tcgccatgca
      361 gcttcgcttc agccaactca accatctctg ccgagcccag catttctatc tggcattcat
      421 tagcgaaacg cgcgatcagc tcatgagtat aagaacgttt aacagttccg cgggttgcca
      481 gtaatccgac aatgccattt gccgtcagac gtgcagcagg tttaatcgcc ggcacgacac
      541 caacaaccgg gaagtcgaac ttttcgcgta atgcaggaag tgaaacggta ctggcggtgt
      601 tgcaagcgac cacagccagc gcaaggggat aacgttcttg cactgcggtg acaattgcca
      661 ccactcgctc aacaataaac tcttcgcttt tttcgccata cgggaaagcg acgttatcga
      721 aagcataaat gtaatggaga tccggtaaga gatgccggat ctcgtcatag accgacaacc
      781 caccgacgcc ggagtcaaac accagcacgg tgggacgtgg ttcagaaggt gtagctgcca
      841 gacaaggtgt attcccgtcc tgcagtttgg tagccataga ctgtctcata atctttgtcg
      901 aacaggttgg ctattttacc acgaactgtc aggtgagagg tgaccggata cgcaaccgca
      961 agatcccaca agctcacacc gcccatttta acggtttgat aaggataaga tgagtaatcc
     1021 ttatcatagc gagtgcctaa atactgataa gtaatacccc agtcgaagtc atacaactgc
     1081 cagtcgagct ggtatttcac ctgctgttta gcacggcgta acaacggcgt gtcggtaatc
     1141 gcattgcgcg catcgacata atcataactc acagtatgcg tcagtggtcc ggtatcaaaa
     1201 ttggcggtcg cctcgacgcc cttaatccgc gctttccctt cgttgtaata tttcagggtg
     1261 tgatcatcat aatcgatcaa gtcactgaca tcgttacgat atccggaaat acgccagttc
     1321 accccagcgg ttaagccttc aaacgcgcct tcccactgtt tgcttttctc agggtccaga
     1381 ttcggatttc cgtagaagcc atacagttgc ccaagatttg gtgccttata agatgtcccg
     1441 taggaagcaa tgaagcgata accttcgata aattcccaac cggcgctggt ttgccaggtt
     1501 ccatgacgac caaactgtga gttatcgtcg ctgcgtgctg cgccttcaaa ggtaaaatcg
     1561 ccgacttgtt gcagcccggt cagatagatg ccggtattac gttgatcata tccatcctca
     1621 acataacctg tacccggcgt cgtagtctgt ttctgccagt cgacacccgc accaatacta
     1681 ccgtgaccaa cgatgacatt gtttgcccac tggacggtgt attgcttcat ctcatcgagc
     1741 gtcgccgacg aatcataacg accataatgg ggatcgtagt tgtaatcttt gctatggcta
     1801 tagctggtaa tgagttgtga tttaatcagt tcgccgttat agcgcagccc ggcgtcccaa
     1861 ctttggctat agagtttacg ggtatcgagc aacggtgaac cgggagaata atacgcgtca
     1921 taattggtac ggttatcata gccatagccg cgcacaaagc cgctctaggc atcagtaaag
     1981 ttatgctcca gcgcgccata aagcgtttta cttaaaaaac catcgttatc tgtctgcgct
     2041 tgcgttccgg tattaccata ggcaacaaca tcataaccat gagtatgggc ataatcgccc
     2101 aacaacgtta ctcgtgtctt atcccccagt tgttgctgtg tagagacatc atagttttga
     2161 taactattgc ttccccaccc tgctgaaatt tccgttccgg gttcatcgcg cgtcgtgatg
     2221 atattcacca ccccacctat tgcatcggaa ccataaacgg cggagcgtgg cccacggata
     2281 tattcaacac gctggacaag cgcaataggg aactggctaa ggtcggcaga accactcacc
     2341 cccgccagat tcaggcgtac gccatcaatt aacaccaaca catgactggc atttgtaccg
     2401 cgaataaaaa tagatgagag ctgacctgaa ccgccgtttt gggtgatatc gacgcccgga
     2461 agacggcgca gcacatcatt gaccgaggtc gactgccagc ggtcgatatc ctgacgcgtc
     2521 acaacggtgg ttggtgcaag cacagtgctg cgcggctgtt caaaacggtt agcagtaacg
     2581 acgagagtat ccgggctggt atcctgtgcc caagcggaaa aggctgtgac agaacacgcc
     2641 gtcagcagcg aagctttttt aatcattgta aagcatccac aatagaagaa ggatgccgca
     2701 ggtttcatca atattacgcg atgatgagaa ccagatgcga cgttggccgg caggtcttcg
     2761 ggcttggagg ggtatctaag atactaagag atgatgacct cccaccggat ggcagtgtcc
     2821 gcataacgca atcatcgcac ctttccttac cgctgcgcgt cagctccaga ttcgcactgg
     2881 attccctatt aactcacagg accggcaagt ggatgctaca ggttgtaaca agttactgtc
     2941 cagacgtagc tcacaaatag gaattcatca agatctggac atctgatgag caatccctac
     3001 aatcgccgcg tactttaatt tttcaggata catcatgacc cccgaacacc ttccaacaga
     3061 acagtatgaa gcgcagttag ccgaaaaagt ggtacgtttg caaagtatga tggcaccgtt
     3121 ttctgacctg gttccggaag tgtttcgctc gccggtcagt cattaccgga tgcgtgcgga
     3181 gttccgcatc tggcacgatg gcgatgacct gtatcacatc attttcgatc aacaaaccaa
     3241 aagccgtatc cgcgtggata gcttccccgc cgccagtgaa cttatcaacc agttgatgac
     3301 ggcgatgatt gcgggtgtgc gtaataatcc cgttctgcgc cacaagttgt tccagattga
     3361 ttacctcacc acgctgagta atcaggcggt ggtttccctg ctataccata agaagctgga
     3421 tgatgagtgg cgtcaggaag cggaggccct gcgcgatgca ctgcgcgcgc agaatctgaa
     3481 tgtgcatctg attggtcggg caacgaaaac caaaatcgag ctggatcaag attacatcga
     3541 cgagcgtctg ccggtcgcag ggaaagagat gatctaccgt caggtagaaa acagctttac
     3601 ccagccgaac gcggcgatga atattcagat gctggaatgg gcgctggacg taaccaaagg
     3661 ctcaaaaggc gatttactgg agctgtactg cggcaacggt aacttttcat tagcgctggc
     3721 gcgcaatttt gatcgggtat tagccactga aatcgccaag ccgtcagtcg ctgccgcgca
     3781 atacaacatt gccgctaacc atattgataa cgtacaaatt attcgtatgg cggcagaaga
     3841 atttactcag gcgatgaatg gtgtgcgcga gtttaaccgc ctgcaaggga tcgacttaaa
     3901 gagttatcag tgcgaaacca tttttgtcga cccaccgcgc agcggtctgg acagtgaaac
     3961 cgagaaaatg gtgcaggcgt atccgcgtat tttgtacatc tcctgtaacc cggaaacgtt
     4021 atgcaagaat ctggaaacat taagccagac gcacaaggtc gaacgtctgg ctctgtttga
     4081 tcagttcccc tacacgcacc atatggagtg cggcgtatta ctgaccgcga agtaaaaccc
     4141 atgccggatg cgccagcatc cggcataata ccgattactc agcaacttcc tgcttacggt
     4201 tacgcatctt cgcgccaatc cagaacacca taatgacgga gagtactgcc gggaagaagt
     4261 tagagccgat atccggatat tccgcacgaa ctaccgtgct gtacagcagt acgccgagaa
     4321 taaaacaggc agctgccaga cccggcaagc ctaccggcat agtgcgatta aggtaacgtt
     4381 gatgcaggca gtaaactgtc agcaccaggg aaataatcgg aaatactgaa aatggcacaa
     4441 tggagctaaa cagcgccgaa aacgtaccat taattgacag gccagccacc agcgccagca
     4501 gtagcgtacc tttatcttga ttagattgtt tcattactcg tccttcacat ttcccggaat
     4561 aattgcggtt ttatcttgct cacggcgata ccagtaataa gcccctttcg aaatcattcg
     4621 cagttgcagt accagtcgct cttctaattg ccgacgttgt tcgacgccga cgtccaacgc
     4681 ctcggcaccc gcactgaaga caattgtcac cattgcttcg gcttgcgctt cagtaaacgc
     4741 acgcggcata tggttttcga gttccagata gtccgcaagt tccgcaatga agtgctgaat
     4801 ttcacgcgca acggcggcac gaaacgcagc ggaggtgccg gagcgttccc gcaataataa
     4861 ccggaaggcg ttaggattat taccgatgaa ctccataaat gtggagaccg aggtgcggat
     4921 cacactcccg cctttggcga tacgctgacg cgcctggcgc atgagttggc gtagcattaa
     4981 accgctctca tcaaccatgg tcagacccag ttcgtctacg tcgcggaaat gccgataaaa
     5041 agaggtggga gcaatgcccg cttcacgcgc cacttcacgc aaactcaggc tggcgaagct
     5101 gcgttcagca cttaattggc taaatgcggc ttccaccagc gaacggcggg ttttttcttt
     5161 ttgttgcgct cttacgccca tcacgatgtc tgaatccttg ccaaaagtac tgctggcact
     5221 ataccagaga atgaacatac tggattgctc cagtattgtg aatgaacggt aacgcaataa
     5281 aacatattta ctgcaattct ttggccggtt cttttacgta caacaacgcc agcatcgaca
     5341 gcaacgtgcc tccacccaga taccacgccg gagctgtcaa actatccagc aacacgatgg
     5401 attgcgtagc gaaatattga gcaaaaccgc caaagattgc cacaccaatg ctataaacca
     5461 gcgcaaaacc caatgcccga atccgtttcg gcaacagttc agagatcaac aacatcactg
     5521 gcacaccgcc aagcgtggta aagctgacca tcacaaaaac caccgtcagc aacatgccag
     5581 gacttgggta attcaccaac agccagaatg acggccagct acagatcagc accatcacac
     5641 gggagattaa aatcagcttt ttacgcccga ccgaatcgca caacatcccc accagcagcg
     5701 cacccacaaa cgtaataacg cccgccagta acatcgctgc atgagaataa tgttgaggca
     5761 tcgccagata cttcgccgcc caggtgccgt aataaaagag ggagatatag gttgcgaccg
     5821 tgctaccaat agcgagtaaa acgccattaa caatagtcgc cttatgttgc aggagcagag
     5881 aaaacgcgct ttcgctggta gcagcttttt tattgcgcac aggctcaggt acgtcatttt
     5941 ccaggctcag acgcaaccag caaccgatag gtgctaataa cacgccaata aaaaatggca
     6001 cacgccagcc ccattcagcc attacggttt ctgaacctgt agcgaacggt agccatgcgc
     6061 tcagacctaa agcgacaaca ccgccaaaag ttgttgccag gccttgagtc gccagtgacc
     6121 aactgctgta aaagccgcga cgatttgccg gagctgactc caccagtagc gacattgaag
     6181 ccccaacttc accgcctgct gcaacaccct gaatcaaacg agcaagtacc agagttgccg
     6241 ttccccaata gcccgccgtc gcatacgtcg gcgcaatgcc aatcatcaac gtgccgaggc
     6301 tcatcagggc aatagtgaac accatcgcgg gtttgcgtcc gaaacgatcg gcccaggccc
     6361 cgacgataat tccaccaagc gggcgcataa aaaaactcac gccaaacgtt gcaaatgcca
     6421 gtaacagcgc gacattgtga tcagcgctgg gtgggaagaa aagcgtactg atatagacca
     6481 caaaaaagtt gtaaacgcca aaatcaaaaa attcgagcgc attgccaaac gccgaggcaa
     6541 aaatcacccg cctgccgctg ggctttttct tcacactcac ggtttcattt acgatcgccg
     6601 tcattccata ttccttgcca taaagagttg ttgtgttgtt tttttattta ttgcagccag
     6661 gcttcaacca gtgcgcccca gtagctgctt gccgggacca ggcttgcatc gttaaagtcg
     6721 taaccagggt tatgcaccat gcaggaacct tctccagcat cgccattacc gaataacagg
     6781 aaaccgcctt tgggttgggc ttccagcatg aaagagaaat cttcactgcc catcagaggc
     6841 ttgatgccaa actcggcccg ctcttcacca aacgttttac acgccacctg ccaggcgaag
     6901 cgcgccatct cctcgtcatt tactaatact ggtgtaccgt taacatgcgt aacctcagcc
     6961 gtagcgccaa agctggcagc ctgggcttgt gccagagcag gaatacgggt cagaagaagt
     7021 tgtcgggtat cgcggctaag agagcggacg ctgattttca tctcagcact gtcaggaatg
     7081 acgttagccg cctcccctgc aacaatactg ccgacggtaa ttaccgccgc ttccagcgga
     7141 tcgacattgc gcgacacaat gctttgtaat gcggtggcga tatgtgcggc aaccagcacc
     7201 ggatcgatgg ctttgtgcgg gatcgcaccg tgtccgccac aaccacgaac cgtaatatgg
     7261 aactgatcca ttgacgccat cagtgcccct ggctggaaat aaaacttacc caccggcagc
     7321 ccgggcatgt tatgcatccc gaaaatgaca tcgcagggga aacgatcaaa aagcccctct
     7381 ttaaccatga tctcaccgcc gttaatcatc tcttccgcag gctggaagat aagacgtaac
     7441 gtgccgttaa aacgacgagt ctcggcaaaa taacgcgcgg cccccagtag tatggtggta
     7501 tgcccgcagg cgtgcattaa accaggatgt ttactggccc agggcttgcc gctattttca
     7561 taaatcggca acgcatccat atccacccgc aggccaatac ttttctctcc gtcgcccact
     7621 tttaacgtgg ccactatccc cgtcgtcgcc agtccttgct ctacttcgta gccccactgg
     7681 cgcagctttt ccgctaccaa agcactggtt ttaaattcct gtaatccctg ctccgggttt
     7741 tcatggatct gatggcggat ctcgcgtagt tcttcctcaa acccacgaat atagtgttcg
     7801 atcatcggct attcctttat tcacttataa acaggctaat taacggattt tattgatggt
     7861 ataaatacaa ataactcatc aatataaaat atttatatgt ttgttttata ataatattta
     7921 ataaagacaa taacaaaaaa gaacgcttcg gcaagataaa actatcagcc ataagaaaaa
     7981 gcgattaata gtgaattaat aaaataagaa gggggaagac aaagcaaagg ccgctcagga
     8041 tatagccaga taaatgacgg ggatcaattg gcttacccgc gatagaatgt taccattctg
     8101 ttgcttttat gtataagaac aggtaagccc taccatgcca cattcctacg attacgatgc
     8161 catagtaata ggttccggcc ccggcggcga aggcgctgca atgggcctag ttaagcaagg
     8221 tgcgcgcgtc gcagttatcg agcgttatca aaatgttggc ggcggttgca cccactgggg
     8281 caccatcccg tcgaaagctc tccgtcacgc cgtcagccgc attatagaat tcaatcaaaa
     8341 cccactttac agcgaccatt cccgactgct ccgctcttct tttgccgata tccttaacca
     8401 tgccgataac gtgattaatc aacaaacgcg catgcgtcag ggattttacg aacgtaatca
     8461 ctgtgaaata ttgcagggga acgctcgctt tgttgacgag catacgttgg cgctggattg
     8521 cccggacggc agcgttgaaa cactaaccgc tgaaaaattt gttattgcct gcggctctcg
     8581 tccatatcat ccaacagatg ttgatttcac ccatccacgc atttacgaca gcgactcaat
     8641 tcttagcatg caccacgaac cgcgccatgt acttatctat ggtgctggag tgatcggctg
     8701 tgaatatgcg tcgatcttcc gcggtatgga tgtaaaagtg gatctgatca acacccgcga
     8761 tcgcctgctg gcatttctcg atcaagagat gtcagattct ctctcctatc acttctggaa
     8821 cagtggcgta gtgattcgtc acaacgaaga atacgagaag atcgaaggct gtgacgacgg
     8881 tgtgatcatg catctgaagt cgggtaaaaa actgaaagct gactgcctgc tctatgccaa
     8941 cggtcgcacc ggtaataccg attcgctggc gttacagaac attgggctgg aaactgacag
     9001 ccgcggacag ctgaaggtca acagcatgta tcagaccgca cagccgcacg tttacgcggt
     9061 gggcgacgtg attggttatc cgagcctggc atcagcggcc tatgaccagg ggcgcattgc
     9121 cgcgcaggcg ctggtgaaag gtgaagccac cgcacatctg attgaagata tccctaccgg
     9181 catttacacc atcccggaaa tcagctctgt gggcaaaacc gaacagcagc tgaccgcaat
     9241 gaaagtgcca tatgaagtgg gccgcgccca gtttaaacat ctggcacgcg cacaaatcgt
     9301 cggcatgaac gtgggcacgc tgaaaatttt gttccatcgg gaaacaaaag agattctggg
     9361 tattcactgc tttggcgagc gcgctgccga aattattcat atcggtcagg cgattatgga
     9421 acagaaaggt ggcggcaaca ctattgagta cttcgtcaac accaccttta actacccgac
     9481 gatggcggaa gcctatcggg tagctgcgtt aaacggttta aaccgcctgt tttaaaactt
     9541 tatcgaaatg gccatccatt cgtgcgcgga tggcctctgc cagctgctca tagcggctgc
     9601 gcagcggtga gccaggacga taaaccaagc caatagtgcg gcgtggttcc ggcttaatgc
     9661 acggcagata aacaacccca tcgcgtttgc gctccggcgg cacagccagc gcaggcagta
     9721 aagtgatccc gctacctgcc gccaccatgt tgcgcagcgt ctccaggctg gtcgcgcgga
     9781 agtgtgtatc ttcatccgcc ccggcttcaa aacagaaacc cattgcctga tcgcgcaaac
     9841 agtgaccatc ttccagcatc agcagttttt cccctgccag atcggccatc ggtacgcatt
     9901 cgcggttcgc ccacgggtga tcttcataga tagccagcaa cattggctca tcaaacaacg
     9961 gcacttcaat gaatgcttcg ctctctttca ccagcgcgag gatcacgcaa tcgagtttgc
    10021 cgctgtccag ttgcgccagt aactggtggg tctgtgcttc atgcagatac atttccagct
    10081 ttggaaaggt ctggtgcagc atagggataa tatgcggtag caggtacggt ccaactgtgg
    10141 gaatcaaacc aatgtgcagc ggcccggaca tcgtctcgcc ctgctggctt gccatctctt
    10201 taaggacttt cacctcacgc agtacggtac gcgcctgatc caccagcagc attcccgcct
    10261 gggtgaacaa cactttacgg ctggtccgct ccagcaacat cacgcccaac tcatcttcca
    10321 gcttacgaat ttgcccgcta agcgtcggct ggctaacgtg gcaggaatct gccgcacgcc
    10381 gaaaatggcg gtgttcggcc aatgccacca ggtactcaag atcacgaata ttcattatcc
    10441 atcctccatt gccacgatag ttcatggcga taggtagaat agcaatgaac gattatccct
    10501 atcaagcatt ctgactgata attgctcaca gaaacggagc ggcacctctt ttaacccttg
    10561 aagtcactgc ccgtttcgag agtttctcaa ctcgaataac taaagccaac gtgaactttt
    10621 gcggatctcc aggatccgct tttttttgcc ataaaaaagc ccggcgataa gccaagctca
    10681 aatttataca tataaatgtt cttaccccaa ccgcgcctgc gcaaaagcaa ttgcctgcgc
    10741 cacctgctgc ggtgagacgc cgccttttgc cgcacgcttg tcgaggcacg attgcagcga
    10801 cagaatcgga tagacatctt cgccaatcac ctggctgaat ttctgtaact cagtcagcgg
    10861 caactcttcc agcggtttgc cctgacgaat agcttccacc accgcttcac ccacgatatg
    10921 gtgcgcctcg cggaacggca cgcctttcgc caccaggtaa tccgccagtt cagtggcgtt
    10981 cgcatacccc tgctgcgccg cttcctggca acgcggacgt ttcacctgaa tgccgtccag
    11041 caccagcgcc gccatatgca ggcagtccag ccaggtgtcg agcgcgtcga acaggccttc
    11101 tttgtcttcc tgcatatctt tgttgtaagc cagcggcaaa cctttcagcg tcatcatcat
    11161 gccggttaac gcgccctgca cacgaccgca tttaccgcga atcagctcca gcgcatccgg
    11221 gtttttcttc tgcggcatta atgatgaacc ggaagtcacg cggtccgaaa gctccacaaa
    11281 ccccgcttcg ccggtgttaa agaaaatcag atcttcagca aaacgcgaca gatgcaccat
    11341 gccgatagcg gcagcagaaa gcagttccaa cacatggtca cggtcagaaa cgctgtccag
    11401 actgttacgg gtcgccgaag caaagcccag ccagcctgct aactgttcac ggtcgatttc
    11461 ataggccgtt cccgccagcg cgccacagcc tagcgggctg acatccagac gcttaagcgc
    11521 atcctgcaaa cggctttcat cacgcgccag catctcaaca taggccaggc accagtgcgc
    11581 gaacgtcacc ggctgggcgc gttgcaggtg agtgtaacct ggcatcaccg catcctgatt
    11641 gttttgtgca gtttccacca gcgccgattg cagttggcgg ttagccgtca gcaactcgct
    11701 aacggtatct ttgcaccaca gtttcaggtc agtcgctacc tgatcattac ggctacgccc
    11761 ggtgtgcagc tttttgccta actggcccac tttgtcgatc agtttgcctt ccacccagct
    11821 atggatatct tcggcgtcgc tttcaaggat ttgttgtggc ctggcgcgaa catcttccag
    11881 cagcacgttc agcgcctctt ccagttgcgc ctgctcttct gcggttaaca cgccgaccgt
    11941 taccagggct ttggaccagg ccacagagcc aacaatatcc tgctccgcca gacggtaatc
    12001 aaagcgcagt gagtcgttga attgtttgaa ccgttgatct gctgcctggg taaaacgccc
    12061 gccccaaagt gccataactc tgtttcctta ttttgaaatt caatgccgga aagctgcgcc
    12121 tccggccaac aaaacttaag ctaaaatccg cgtacccatc ggcataccgt taaacagtgc
    12181 cggaagctgc tccgcatgac gccaggaggc gatatctacc ggacggccca acgtgcgcgc
    12241 agcatccagc gccgcgttca ctttcactat catgccgtca gtaataatac cctgctcaat
    12301 cagttgttct gctttcgcgg tggtcatttc ggcaatgcgt tgccctttgc cgtcgagaat
    12361 gccactgacg tcggagagca aaatcagatc cgcgcccagc gttgccgcca gcgccgttgc
    12421 cgcctgatcg gcattgacgt tcatcagttg cccttcgtct gttacgccaa tggagctgac
    12481 caccggcaga taaccgttct ccagcaaggt gttgataagc ttaggcgaac ctggctgcgc
    12541 cagtccaaca tggcctaact cttcatcaag ctgggtcact ttgacgctgt cgccgtcacc
    12601 gagaaacaaa cctacggccg caatctgatg tttcttcgcc catgccaaca gggttttatt
    12661 tgccgttccc gccagtgctc cggtgataat gtctatctga tcagcaggcg tcacccgcag
    12721 gccatttttc tttttcaccg gcagattcag ccctttcatc agctcatcca ccacgcaacc
    12781 gccgccgtgc acaatcacca gcggacgctg atgtgactca cgataattca ccagtgcgct
    12841 aaacagacgt tccagcgcct cttcactatc cagcagtacg ccacccagtt tgataattaa
    12901 tggattcatc attgcaccct taaataagag actgcgtttc cgcatagccg aaacgaatat
    12961 tggcgcactg taccgcttgt gccgccgcgc ctttcagtaa gttgtcttcg gtcgccacaa
    13021 taatcagatg ctcgccctga acggcaaacc cgatatcgca aaatggcagc ccaacgacat
    13081 ttttcagcgc cggaacgcct ttgtcataca gccgcaccag cggtttatgg gcatacgcct
    13141 gctgtaacac ttgcgcgact tgcgcctggg tcacacccga tttcaggcgg caggtaatgg
    13201 tttcgagaat gccgcgcggg aaattgccca gatgtggggt gaagataacg tcagcaccga
    13261 ggtgtgtggc gatctctggt tgatggcgat gagtaaagac gccatacggt tgcaggctaa
    13321 cttcacaaaa gctgtttgaa atggccgctt tacgccctgc accgctcacg ccgctggtgg
    13381 cgttgatcac cggccactga ttgaggtcaa gaagatcggc atcaatcaac ggtttcagcg
    13441 ccagctgtgc cgccgtcgga taacagcccg gcaccgcaat caaattcgct tcttttaatt
    13501 tattaccgca ccactccgcc agaccgtagg ctgcctgttc caacagttcc gggtattgat
    13561 gggtaaagcc gtaatatttt tcatagaagg tggcgtcgtt aacacgaaac gcgccggaaa
    13621 ggtcgaacac cacgcagccc gcttcaagaa actgcggcgc taaatcgtgg ctaacttcat
    13681 gggcggtggc gagaaacact acgtcccccc ctgggctaaa ctcgctgata tccgacatcg
    13741 gctgcaacgg cagatcaacg atgcctttta gctgcggatg caaatcggag attaactttc
    13801 ccgcatcatt gctttgcgct gaaacagtca aagcggttat gttcatatgc ggatggcgat
    13861 ttacataggt cactagctct gcgccagcgt agccgctggc acccacaatc agcgtattca
    13921 acatcggggc tattcacctt cttatgtctg gttgccaggt taaacgtaaa acattcacct
    13981 tacggctggt gggttttatt acgctcaacg ttattgtatt tttattcata aatactgcat
    14041 gaatattgat actatcatga ccagaggtgt gtcaacaatg aaaaacaaat taccgccatt
    14101 tatcgagatt taccgtgctc tgattgccac accttcaata agcgccacgg aagaggcact
    14161 cgatcaaagc aatgcagatt taatcactct gctggcggac tggtttaaag atttaggctt
    14221 caatgtggaa gtgcagcctg tgccaggaac tcgcaacaaa tttaatatgc tggccagttg
    14281 cggacagggg gctggcggct tgttgctggc ggggcatacc gatacggtgc catttgatga
    14341 cggttgctgg acgcgcgatc cgtttacact gacggagcat gacggcaagc tttacggctt
    14401 aggcaccgcg gacatgaaag gcttttttgc gtttatcctt gatgcgctac gcgatgtcga
    14461 cgtcacgaaa ctgaaaaaac cactctacat tctggcgact gctgatgaag aaaccagtat
    14521 ggccggagcg cgttattttg ccgaaactac cgccctgcgc ccggattgcg ccatcattgg
    14581 cgaaccgacg tcactacaac cggtacgcgc acataaaggt catatctcta acgccatccg
    14641 tattcagggc cagtcggggc actccagcga tccagcacgc ggagttaacg ctatcgaact
    14701 aatgcacgac gccatcgggc atattttgca attgcgcgat aacctgaaag aacgttatca
    14761 ctacgaagca tttaccgtgc cataccctac gctcaacctc gggcatattc acggtggcga
    14821 cgcttctaac cgtatttgcg cttgctgtga gttgcatatg gatattcgtc cgctgcctgg
    14881 catgacactc aatgaactta atggtttgct caacgatgca ttggctccgg tgagcgaacg
    14941 ctggccgggt cgtctgacgg tcgacgagct gcatccgccg atccctggct atgaatgccc
    15001 accaaatcat caactggttg aagtagttga gaaattgctc ggagcaaaga ccgaagtggt
    15061 gaattactgt accgaagcgc cgtttattca aacgttatgc ccgacgctgg ttctggggcc
    15121 tggctcaatt aatcaggctc atcagcctga tgaatatctg gaaacacggt ttatcaagcc
    15181 cacccgcgaa ctgataaccc aggtaattca tcatttttgc tggcattaaa acgtaggccg
    15241 gataaggcgc tcgcgccgca tccggcaccg ttgccaaact ccggtgccgc aataatgtcg
    15301 gatgcgatgc ttgcgcatct tatccgacct acacctttgg tgttatgtat ggcgattttt
    15361 taacattccc ataagttacg cttatttaaa gcgtcatgaa tttaatgacg taaattcctg
    15421 ctatttattc gtttgctgaa gcgatttcgc agcatttgac gtcaccgctt ttacgtggct
    15481 ttataaaaga cgacgaaaag caaagcccga gcatattcgc gccaatgcga cgtgaaggat
    15541 acagggctat caaacgataa gatggggtgt ctgggataat atgaacgaac aatattccgc
    15601 attgcgtagt aatgtcagta tgctcggcaa agtgctggga gaaaccatca aggatgcgtt
    15661 gggagaacac attcttgaac gcgtagaaac tatccgtaag ttgtcgaaat cttcacgcgc
    15721 tggcaatgat gctaaccgcc aggagttgct caccacctta caaaatttgt cgaacgacga
    15781 gctgctgccc gttgcgcgtg cgtttagtca gttcctgaac ctggccaaca ccgccgagca
    15841 ataccacagc atttcgccga aaggcgaagc tgccagcaac ccggaagtga tcgcccgcac
    15901 cctgcgtaaa ctgaaaaacc agccggaact gagcgaagac accatcaaaa aagcagtgga
    15961 atcgctgtcg ctggaactgg tcctcacggc tcacccaacc gaaattaccc gtcgtacact
    16021 gatccacaaa atggtggaag tgaacgcctg tttaaaacag ctcgataaca aagatatcgc
    16081 tgactacgaa cacaaccagc tgatgcgtcg cctgcgccag ttgatcgccc agtcatggca
    16141 tactgatgaa atccgtaagc tgcgtccaag cccggtagat gaagccaaat ggggctttgc
    16201 cgtagtagaa aacagcctgt ggcaaggcgt accgaattac ctgcgcgaac tgaacgaaca
    16261 actggaagag aacctcggct acaaactgcc cgtcgaattt gttccggtac gttttacctc
    16321 gtggatgggc ggtgaccgcg acggcaaccc gaacgtcact gccgatatca cccgccacgt
    16381 cctgctgctc agccgctgga aagccaccga tctgttcctg aaagatattc aggttctggt
    16441 ttctgaactg tcgatggttg aagcgacccc tgaactgctg gcgctggttg gcgaagaagg
    16501 tgccgcagaa ccgtatcgct atctgatgaa aaacctgcgt tctcgcctga tggcgacaca
    16561 ggcatggctg gaagcgcgcc tgaaaggcga agaactgcca aaaccagaag gcctgctgac
    16621 acaaaacgaa gaactgtggg aaccgctcta cgcttgctac cagtcacttc aggcgtgtgg
    16681 catgggtatt atcgccaacg gcgatctgct cgacaccctg cgccgcgtga aatgtttcgg
    16741 cgtaccgctg gtccgtattg atatccgtca ggagagcacc cgccataccg aagcgctggg
    16801 cgagctgacc cgctacctcg gtatcggcga ctacgaaagc tggtcagagg ccgacaaaca
    16861 ggcgttcctg atccgcgaac tgaactccaa acgtccgctt ctgccgcgca actggcaacc
    16921 aagcgccgaa acgcgcgaag tgctcgatac ctgccaggtg attgccgaag cgccgcaagg
    16981 ctccattgcc gcctacgtga tctcgatggc gaaaacgccg tccgacgtgc tggctgtcca
    17041 cctgctgctg aaagaagcgg gtatcgggtt tgcgatgccg gttgctccgc tgtttgaaac
    17101 tctcgatgac ctgaacaacg ccaacgatgt catgactcag ttgctgaata tcgactggta
    17161 tcgcggcctg attcagggca aacagatggt gatgattggc tattccgact cagcaaaaga
    17221 tgcgggcgtg atggcagcgt cctgggcgca atatcaggca caggatgcat taatcaaaac
    17281 ctgcgaaaaa gcgggtattg agctgacgtt gttccacggt cgcggcggtt ccattggtcg
    17341 cggcggcgca cctgctcatg cggcgctgct gtcacaaccg ccaggaagcc tgaaaggtgg
    17401 cctgcgcgtg actgaacagg gcgagatgat ccgctttaaa tatggtctgc cagaaatcac
    17461 cgtcagcagc ctgtcgcttt acaccggggc gattctggaa gccaacctgc tgccaccccc
    17521 tgagccgaaa gagagctggc gtcgcattat ggatgaactg tcagtcatct cctgcgatct
    17581 ctaccgtggc tacgtacgtg aaaacaaaga ttttgtgcct tacttccgct ccgctacgcc
    17641 ggaacaagaa ctgggcaaac tgccgttggg ttcacgtccg gcgaaacgtc gcccaaccgg
    17701 cggcgtcgag tcactacgcg ccattccgtg gattttcgcc tggacgcaaa accgcctgat
    17761 gctccccgcc tggctgggtg caggtacggc gctgcaaaaa gtggtcgaag acggcaaaca
    17821 gagcgagctg gaggctatgt gccgcgattg gccattcttc tcgacgcgtc tcggcatgct
    17881 ggagatggtc ttcgccaaag cagacctgtg gctggcggaa tactatgacc aacgactggt
    17941 agacaaagca ctgtggccgt taggtaaaga gttacgcaat ctgcaagaag aagacatcaa
    18001 agtggtgctg gcgattgcca acgattccca tctgatggcc gatctgccgt ggattgcaaa
    18061 gtctattcag ctacggaata tttacaccga cccgctgaac gtattgcagg ccgagttgct
    18121 gcaccgctcc cgccaggcag aaaaagaagg ccaggaaccg gatcctcgcg tcgaacaagc
    18181 gttaatggtc actattgccg ggattgcggc aggtatgcgt aataccggct aatcttcctc
    18241 tcctgcaaac cctcgtgctt ttgcgcgagg gttttctgaa atacttctgt tctaacaccc
    18301 tcgttttcaa tatatttctg tctgcatttt attcaaattc tgaatatacc ttcagatatc
    18361 cttaaggaat tgtcgttaca ttcggcgata ttttttcaag acaggttctt actatgcatt
    18421 ccacagaagt ccaggctaaa cctcttttta gctggaaagc cctgggttgg gcactgctct
    18481 atttttggtt tttctctact ctgctacagg ccattattta catcagtggt tatagtggca
    18541 ccaacggcat tcgcgactcg ctgttattca gctcgctgtg gttgatccca gtattcctct
    18601 ttccgaagcg gattaaaatt attgccgcag tgatcggcgt ggtgctatgg gcggcctctc
    18661 tggcggcgct gtgctactac gtcatctacg ggcaggagtt ctcgcagagc gttctgtttg
    18721 tgatgttcga aaccaacacc aacgaagcca gcgagtattt aagccagtat ttcagcctga
    18781 aaattgtgct tatcgcgctg gcctatacag cggtggcagt tctgctgtgg acacgcctgc
    18841 gcccggtcta tattccaaag ccgtggcgtt atgttgtctc ttttgccctg ctttatggct
    18901 tgattctgca tccgatcgcc atgaatacgt ttatcaaaaa caagccgttt gagaaaacgt
    18961 tggataacct ggcctcgcgt atggagcctg ccgcaccgtg gcaattcctg accggctatt
    19021 atcagtatcg tcagcaacta aactcgctaa caaagctact gaatgaaaat aatgccttgc
    19081 cgccgctggc taatttcaaa gacgaatcag gtaacgaacc gcgcacctta gtgctggtga
    19141 ttggcgagtc gacccagcgt ggacgcatga gtctgtacgg ttatccgcgt gaaaccacgc
    19201 cggagctgga tgcgctgcat aaaaccgatc cgaatctgac cgtgtttaat aacgtagtta
    19261 cgtctcgtcc gtacaccatt gaaatcctgc aacaggcgct gacctttgcc aatgaaaaga
    19321 acccggatct gtatctgacg cagccgtcgc tgatgaacat gatgaaacag gcgggttata
    19381 aaaccttctg gatcaccaac cagcagacga tgaccgcccg caataccatg ctgacggtat
    19441 tttcgcgcca gaccgacaag cagtactaca tgaaccagca acgtacgcag agtgcgcgtg
    19501 aatacgacac caacgtgctg aagccgttcc aggaagtgct gaatgaccct gcgccgaaga
    19561 aactgatcat cgttcatctg ctgggtacgc atatcaaata caaataccgc tacccggaaa
    19621 atcagggcaa gtttgatggc aataccgatc atgttccgcc aggattaagc gcagaagagc
    19681 tggaatcata taacgattat gacaacgcta acctgtataa cgatcatgtg gttgccagcc
    19741 tgattaaaga ctttaaagcg gcagacccga acggattcct ggtttacttc tctgaccacg
    19801 gtgaagaggt ttacgacacg ccgccgcaca aaactcaggg gcgtaacgaa gacaacccga
    19861 cgcgccacat gtacaccatt ccgttcctgc tgtggacgtc ggaaaaatgg caagcgactc
    19921 atccccgtga tttctcgcag gatgttgatc gtaaatacag ccttgcggaa ctgatccaca
    19981 cctggtcaga tttagcaggc ttatcttacg acggttacga tccaacccgt tcagtggtga
    20041 atccgcagtt caaagaaact acccgctgga ttggtaaccc gtacaagaaa aacgcgctga
    20101 tcgattacga cacactgccc tatggcgagc aggtgggtaa tcagtaaatg acctttgtat
    20161 cgcgtctggc gctatttgcc ggatgcgata ctgccgcaat gtttacatcg aactcccctc
    20221 aggccacact tttcaggtgg ccttttttaa taatgccagt tactgttttc ccgtctacat
    20281 acctaaggga ataacatgta tcacgacgtc agctatctgc tctcccgcct gatcaacggc
    20341 ccggtgcccg atcttgcgta tcaggtcgat tctccacggc tggaaattgt gctggaaggt
    20401 gagtttgttg ataccggcgc tggagcaacg ttagttcccg gcgatgtgct gtacgttgcc
    20461 gctggtggct ggaattttcc acaatggcaa gcccccgcca ctacctttag tgtgctgttt
    20521 ggcaaacagc aactcggctt cagcgtcgtg caatgggatg gcaaacaata tcaaaatctg
    20581 gcgaagcaac acgtcgcccg acgcggccca ctcataggtt cttttctgct acaaacgctc
    20641 aatgaaatgc aaatgcagcc gcaggagcag caaacggcaa ggcttatcgt agccagcctg
    20701 cttagccact gccgcgattt gctcggcagc caaatccaga ccgcctcacg cagccaggca
    20761 ctatttgaag ctattcgcga ttatatcgac gaacgctatg cctccgcgct tacccgcgaa
    20821 tctgtcgcac aggcattcta tatttcacca aactatctct cgcacctgtt tcaaaaaacg
    20881 ggggccattg gttttaacga atacctgaat cacacgcgac tggagcacgc taagacgtta
    20941 ttgaaaggct atgacctgaa ggtaaaagaa gtggcgcacg cctacggctt tgtcgacagc
    21001 aactacttct gccgtctgtt tcgtaaaaac accgaacgct cgccgtcgga atatcgccgg
    21061 cagtaccaca gccaactgac agaaaaaccg actactccag aataagatgg gtttgctgcg
    21121 gcgcagaaag cactttgcgc accgcgctca ttacccgctg cggctcacgc aggaatgcgt
    21181 agatgctgca ttgcacatag cggcaatgtt caaatcgctc ggcaccggca agctcgatat
    21241 ccgtaatcaa cagagcaaca tccgcccgac ggatatcctc gtccgctaaa cgattctccg
    21301 ttcccagcgc gccctgagtt tcaatgctga cgccccactt ctctaactgg cacaactttt
    21361 ccagccgctc cgccgccata taagtatgcg ccacgccgct tacgcaggcg gttactgcca
    21421 ccaggtatgc cattttaacc tcccacggta acctgaaatc cggcccgttc tgccatttcg
    21481 cgcatcgttg tcacatcggc tgacgacggc gcaggcacct ctttcatcga ccatgttttc
    21541 cccagcaggc ggtatttcgg ttcgccgtac tgatgaaacg gtaacagatg gatctgcctg
    21601 atattcagcg ggatcagcac gtccagcgcc tgctgcatat tctcccggct gagcgtgaaa
    21661 ctagggatca gcggtaaacg cgggatcacg ttgacgccct cactcaccag caaacgcaga
    21721 ttctccagca cgcgtggcag gttcatcttc accacatccc acgcctgagt cgcgtccata
    21781 atttttaaat cgaacaacac ttcatcgcac aatttcgcca gcggtaacag cttgcttgct
    21841 ggcgcgtctc cggcagtttc aatggcgcat gacacacccc acagccgcag tcgctgtaaa
    21901 aaacgggtag caaactccgc ctgcattaac acttcgccgc cagaaagcgt gacgccgccg
    21961 ccggacgtgc gaaagaaaat gtcatctttc atcacttccc gttccagagc gtcaaggctg
    22021 atatcgcgac caatccgttc aaacgcaccg gaggggcatt catccgcatc acgcaaacat
    22081 ttcgcacagt gcagacattt cgcctctctg cgtaccgtct ggattttgcc ggagatcgac
    22141 tccggattag cacaccacgg gcaaagatgc ggacagcctt taaaaaagac caccgtacga
    22201 atgccctcgc cgtcattcag tgaataacgc tgaatgttga aaatgcgcgc cacatcattg
    22261 cggcgcgttt ccacaacgtt acagctgatg cgctgtccgg cggatgatgt catcctggat
    22321 ctccttcgac agttcgacaa agaaggcgct gtatccggca acgcgcacca ccagcccggc
    22381 ataatcttgt gggcgctgtt gcgcttcccg caacgtgtcg gcgttcacca cgttaaactg
    22441 aatatgttgt aacttaagct gggtaaatgc ccgtaagaag tcggccagtt tgcgtaatcc
    22501 cgcttcacct tccagggtcg ccggagtgaa tttcacgttc agcaacgtac cgttagacag
    22561 cagcgtatta tcgagcttac tgactgactt cagtaccgcc gttggccctt gtgcgtcctg
    22621 acccagcata ggtgacaagc cgccgtctgc cagttgttcc ccggcaaaac gaccgtctgg
    22681 cgtcgcgcca accaccgatc ccaacgggac gtgagcagaa acggtatacg atcccggcgt
    22741 gaagtagccg ccgcgcgggt tctggtattt ttccacttct ttgcagtagt ggcgcaacag
    22801 ttcggcgcta atgttatcca cctcgtcgat atcgttaccg tatttctcaa agcggttaat
    22861 taagcgagcg cggacttttt cgtcttctgg cgttgcaaag ttggctttta ataccgacag
    22921 caattcgtca aaacttaaac gctgttgctc aaaaaccatc cctttcaacg catggagaga
    22981 atcgctcagg ttggcgatac caattccctg tacgccggag aagttataac gcgcgccgcc
    23041 atcggtaata tcgcgacctt tttccagaca atcgctgata aaagacgaga gcagcggtac
    23101 aggtgcccag tcgcgatggc cgatatcaca aatattgctg ccctcaacca tcagggtgat
    23161 gtagtggctg atcttggcgc ggatctgctc cagtaaacct tcataagtca gcgcagcatt
    23221 gccttcattt tcatgcaggc agatttccat cactttcagc agattaaaca tcgcgatgtc
    23281 atgcaagccg taggttctgc cgggaataga taattccaca cagcccacta cggaatagtc
    23341 gcgcgcatct tccagcgaaa cgccacggtt gaggaacgct ggcaccacca cttcatcgtt
    23401 aaagatttgc ggaataccgg tgccgaggcg aatggtttcg gcggttttca tcaggaacgg
    23461 cgtgtcgatc aaggcgttag tgcgcacgcc gaggttcggt tgcggtaatt gcacgctttg
    23521 ataggcgtca aggcaaagga acgaaagcac gttcaccgcg ctacgtccgt tctcggttaa
    23581 cccgccgagc agtgcggtat agccggtcgg gaaacctgcg aaataacgcg cgctgctggt
    23641 ggagcgcaac agcacgatgt cgttgcattt cacccataaa gattcgagca gttctttcag
    23701 gaacgccgca tcttctccct gggttaatga tgcctgatag aacggcaaca tatactggtc
    23761 gaagcgcccc aacgatagcg aactggcgtt ggattcgtat tgcagaatga tgttcatgta
    23821 ccagaataac tggcacgcct gccagaacgt ctgcggctta tgttcggcgt tatggcgaga
    23881 gatctccgca atagtcagca gttcttcgcg acgctgggca tctgtgcagt ttgccgccat
    23941 cgtttccgcc agttcggcgt aacgcaaaat gtgtttctgc gaggcttcca gcagtaacag
    24001 cgctgcctga taaaagtgat tctccggctg ttgctgacaa tgttgctgca tctgtgccac
    24061 cagctcaccc agaccgtgat tcaacaggcg tgggtaatca ataataatgt gcccctggcc
    24121 tttatctgtc tggttgatgc tgaaaatctg cgtgctggtc gcggctttta cttcatctgt
    24181 catctgcccg ttgatgaaat ctttcatcga acgtttttcc cagtacggga acaactcttc
    24241 acggtagata cgtttatctt cttcgctgat agcaaagcgg tcctgcggac gcgtcgggaa
    24301 ttgatccagc tctttcagca gccagtaagg gtccatttcc ggcgacataa tcccggcgcg
    24361 cggttttacg gtgcggttac cggcaatcag ttcttcatca cgaatcgaaa tttcgacatg
    24421 ttcaaggata tacgctgttg ctttcgcccg gcgcaatatc accggttcgc cttcggtttg
    24481 ccgatggctg gcggtataaa gcagcgcccg ctccagcgag atttcacaga tattggcaaa
    24541 cagtgcagtt ttgaggcgag agatacgatt cgtcatgagg aactcctgtg ggaaagcgaa
    24601 cccgcccttg cgagcgggag aagaacttaa gcggtttgcg ccaggtgagc ttcaattttg
    24661 ctcataatgg cgtcagcacg ttttactgca tcgctgatgt tgacgcgcac gatggtcttg
    24721 ccagcaaaac gctcttcaaa cttgatgccg atatctttgg tcagaatcac catatcagcg
    24781 ctcgccacgt cttccgcagt cagttcattt tccagaccaa ttgacccctg ggtttctact
    24841 ttcacttccc agcctttcgc tttcgcggca ctttccagcg cctctgctgc catataggta
    24901 tgggcaacac ctgaaggaca tgcggttact gcaataattt tcgtcatggc tcgttcctca
    24961 attaattaat ttcaaaatcc aaatccaggt cgtcttcttt ttcatcagtc gaagacccat
    25021 ttttacgcgc cagacttttc agcacgttca cacaaacagc cgtcaccact gctccgacag
    25081 ccactgctgc gatataaccc agcttgcctt caaccaccgg cagcacaatc agaccacccc
    25141 agcctgcata gcactgcgca ccgaccagcg ccgcagttac tgcaccacaa actgaaccga
    25201 tcatgatgga aggaataaca cgcagcggat cggcagcggc gaaaggaatc gccccttcag
    25261 taaccccaac gcaccccatc accagcgccg ctttgccggt ttcgcgctct tctgcggaga
    25321 aatttttacg accaatcagc gtcgccagcc ccatccccag cggcgggata caaataccca
    25381 cggcagcaat ggccaccacg gtataaacac cctgagcaac gcaaatcagc atgaaggcat
    25441 aggccacttt gttaaccggg ccgcgcatat cgaacgccag catcagaccc atgatcaccg
    25501 ccagcataac aatgctgccc tgctgcatcc cctgtagcca ctgagtcatg ctgttggtca
    25561 acgcccctac aggctcgccc agaccccaca tcatgatgcc tgcggtaatc agtgtgccga
    25621 cgataggaat gatgaagatg ggcatcaccg agcgcagaac tttatgcacc ggaattttct
    25681 tcaggtaatg caccacgatg ccgccgataa tcccggcgat cagcgcacca aagaaacccg
    25741 cgccaaagct gttgccgacc caggcaccga tagcgcacgg agccagcgca gaacgctctg
    25801 caatggagta accaatgtaa gcggcgagga aaggcaccat cagcgtcaaa cccgcaacgc
    25861 cgatatcaaa cagttttttc agattcggat cggctacggc atccggcact gcgcctttgc
    25921 catacaacat gacggaaacc gccagcaaaa taccgcccga tactacgaag ggaatcatgt
    25981 gtgaaacgcc cgtcattaaa tgctgacggg tatttttcag gatctgcacc aactcattca
    26041 taagctgctc ccgggcttgc gaaagcccat gtccatattt ttgatggagg aaacaatagg
    26101 caatcgcagg cggagcaaac agtggataaa aaggccattt actggacttt tgtaatatca
    26161 gtacaaaaat gcgatccgcc tcataacttg cgctaatccg gaagcatgcc gcaaaacggc
    26221 gtcttgtgag acgcgtcgca aattgacggt tacattacat ttgtccagct tttggcagat
    26281 ttgtcacatg gcaggccgtt gccgtgcgct cttatcctgt aaacagaaaa ccgtaccggg
    26341 agagaggcaa tggccctgat tgtggaattt atttgtgagc tacctaacgg cgtacatgca
    26401 cgtccggcaa gccacgttga aacgctgtgt aatacttttt catcacaaat tgagtggcat
    26461 aacctgcgca ctgaccacaa gggcaacgcc aaaagcgccc ttgcgctgat tggcaccgac
    26521 acgctggcgg gcgataactg ccggttactg atttccgggg ccgacgaaca ggaagcgcac
    26581 cagcgtttaa gccaatggct gcgcgatgaa ttcccccact gcgatgcgcc gctggcggaa
    26641 gttaaatctg acgaactgga accactgccg gtttcactga ccaatctgaa tccgcaaatt
    26701 atccgcgccc gcaccgtgtg cagcggtagc gcaggcggca ttctgacgcc gatctcttct
    26761 ttagatctca atgcgctggg taatcttccc gcagccaaag acgttgacgc cgagcaatcc
    26821 gcactggaaa acggcctgac gctggtactg aaaaacattg agtttcgtct gctggatagc
    26881 gacggtgcta ccagcgcgat tctggaagcg caccgatccc tggctggcga tacttccctg
    26941 cacgaacatt tactggcagg cgtcagcgcc ggattaagct gcgccgaagc gattgtcgcc
    27001 agtgcgaatc acttttgtga agagttcgcc cgttccagca gcagctacct gcaagaacgt
    27061 gccctggacg tacgcgacgt ctgcttccag ttactccagc aaatctacgg tgagcaacgc
    27121 ttcccggcac cgggcaaact gacgcagtcc gccatttgta tggctgatga actgaccccc
    27181 agccagttcc tcgaactgga taaaaatcac ctcaaaggat tgttactgaa aagcggcggc
    27241 accacgtcac acacggtgat ccttgcccgt tcgttcaaca ttccgacgct ggttggtgtg
    27301 gatattgatg ctctcactcc gtggcagcat caaacgattt atatcgacgg caacgctggg
    27361 gcgattgtgg ttgagccagg ggaagccgta gctcgttatt atcagcaaga agcccgcgta
    27421 caggacgccc ttcgtgagca acagcgtgtc tggctgaccc aacaagcccg taccgctgac
    27481 ggtatccgca ttgaaattgc cgctaacatc gctcactccg tggaagcgca ggccgcattc
    27541 gtcaatggtg cggaaggcgt tggtttattc cgcactgaaa tgctctatat ggatcgcacc
    27601 agtgcaccgg gcgaaagcga gctgtacaac attttttgtc aggcgctgga gtccgccaac
    27661 ggacgcagca ttattgtgcg cactatggac attggcggcg acaaacccgt tgattatctc
    27721 aacattccgg cagaagctaa cccgttcctc ggttatcgcg ctgtgcgtat ttatgaagaa
    27781 tacgcctcgc tgttcaccac acaactacgg tcgatcctgc gcgcctccgc tcacggcagc
    27841 ctgaaaatca tgatcccgat gatctcttca atggaagaga tcttatgggt gaaagaaaaa
    27901 ctggcggaag ccaaacagca actgcgtaac gaacacattc cgtttgatga gaagatccag
    27961 ctcggcatta tgctggaagt gccgtcggtg atgttcatca tcgatcaatg cttcgaagag
    28021 attgatttct ttagtattag tagtaatgac ctgacgcaat atctgctggc ggtggatcgc
    28081 gataacgcta aggttactcg tcactacaac agcctgaatc cggcattctt gcgggcgctc
    28141 gattacgccg tgcaggcggt gcatcgccag ggcaaatgga ttggtctgtg cggtgagctg
    28201 ggagcgaaag gttccgtgct gccgttgctg gtcggtttag ggctggatga actcagcatg
    28261 agcgcaccgt caattccggc ggcgaaagcg cgaatggcgc aacttgatag ccgtgagtgc
    28321 cgccagttgc tcaaccaggc aatggcctgc cgtacttcgc tggaagtgga acatctgctg
    28381 gcgcaattcc gcataaccca acaggacgca ccactggtca ccgccgagtg catcacactg
    28441 gaaagcgact ggcgcagcaa agaagaagtg ctcaaaggca tgaccgataa cctgctgctg
    28501 gcgggccgct gccgctatcc gcgtaaactg gaagccgact tatgggcgcg cgaggccgtt
    28561 ttctctaccg gtctgggctt tagttttgcc attccacaca gcaaatcaga acacattgag
    28621 caatccacca tcagcgtggc gcgtctgcaa gcgccggtgc gctggggcga tgatgaagcg
    28681 caattcatca ttatgttaac cctgaacaaa cacgctgcgg gcgatcagca catgcgcatt
    28741 ttctcgcgcc tcgctcgccg catcatgcac gaagaattcc gtaacgcgct ggttaacgcc
    28801 gcctctgccg acgctatcgc cagcctgctg caacatgaac tggaactgta aaaggaaaca
    28861 tcatggaact gtatctggac accgctaacg tcgcagaagt cgaacgtctg gcacgcatat
    28921 tcccgattgc cggggtgaca actaacccga gcattatcgc tgccagcaag gagtccatct
    28981 gggaagtgct gccgcgtctg caaaaagcga ttggtgatga gggcattctg tttgctcaga
    29041 ccatgagccg cgacgcgcag gggatggtgg aagaagcgaa gcgcctgcgc gacgctattc
    29101 cgggtattgt ggtgaaaatc ccagtgactt ccgaaggtct ggcagcaatt aaaatactga
    29161 aaaaagaggg tattactaca cttggcaccg ctgtatatag cgccgcacaa gggttattag
    29221 ccgcactggc aggggcaaaa tacgttgctc cgtatgttaa ccgcgtagat gcccagggcg
    29281 gggacggcat tcgtacggtt caggagctgc aaacgctgtt agaaatgcac gcgccagaaa
    29341 gcatggtgct ggcagccagc tttaaaacgc cgcgtcaggc gctggactgt ttactggcag
    29401 gatgtgaatc catcaccctg cccttagatg tagcgcaaca aatgctcaac acccctgcgg
    29461 tagagtcagc tatagagaag ttcgaacacg actggaatgc cgcatttggc actactcatc
    29521 tctaaaggag caattatgga ccgcattatt caatcaccgg gtaaatacat ctagggcgct
    29581 gatgtgatta atcgtctggg cgaatacctg aagccgctgg cagaacgctg gttagtggtg
    29641 ggtgacaaat ttgttttagg ttttgctcaa tccactgtcg agaaaagctt taaagatgct
    29701 ggactggtag tagaaattgc gccgtttggc ggtgaatgtt cgcaaaatga gatcgaccgt
    29761 ctgcgtggca tcgcggagac tgcgcagtgt ggcgcaattc tcggtatcgg tggcggaaaa
    29821 accctcgata ctgccaaagc tctggcacat ttcatgggtg ttccggtagc gatcgcaccg
    29881 actatcgcct ctaccgacgc accgtgcagc gcattgtctg ttatctacac cgatgagggt
    29941 gagtttgacc gctatctgct gttgccaaat aacccgaata tggtcattgt cgacaccaaa
    30001 atcgtcgctg gcgctcctgc acgtctgtta gcggcgggta tcggcgatgc gctggcaacc
    30061 tggtttgaag cacgcgcctg ttcccgtagc ggcgctacca ctatggcggg cggcaagtgt
    30121 acccaggcgg cgctggcact ggctgaactg tgctacaaca ccctgctgga agaaggcgaa
    30181 aaagcgatgc ttgccgccga acagcatgta gtaacccctg cgctggaacg cgtgattgaa
    30241 gcgaacacct atttaagcgg tgtaggcttt gaaagtggtg gtctggctgc ggcgcacgca
    30301 gtgcataacg gcctgaccgc tatcccggac gcgcatcact attatcacgg tgaaaaagtg
    30361 gcatttggta cgctaacgca gctggttctg gaaaacgcac cggttgagga aatcgaaacc
    30421 gtagctgcac ttagccatgc ggtaggtttg ccaataactc tcgctcaact ggatattaaa
    30481 gaagatgtcc cggcgaaaat gcgaattgtg gcagaagcgg catgtgcaga aggtgaaacc
    30541 atccacaaca tgcctggcgg cgcgacgcca gatcaggttt acgccgctct gctggtagcc
    30601 gaccagtacg gtcagcgttt cctgcaagag tgggaataac ctactccaaa ctcccggctt
    30661 gtccgggagt ttgaacgcaa aattgcctga tgcgctacgc ttatcaggcc tacgcaatct
    30721 ctgcaatata ttgaatttgc gtgcttttgt aggccggata aggcgttcac tccgcatccg
    30781 gcactctgtg ccagtaatct gaaactccca cgttgttcag gagtttttta tccgcttctg
    30841 gacattttct ccacagaaca atcgttagcc cggaaggtcg aatctgtgac tcttattttc
    30901 acggacgaac cagatgaaag cttcactggc gctgctcagc ctgctaacgg catttaccag
    30961 ccactcctta aaatctcccg ccgttccacc aaccgtggta caaatccagg ccaataccaa
    31021 ccttgccatc gcagacggtg ccagacagca aattggcagc acgctatttt acgatccggc
    31081 gtatatgcag cttacctatc ctggcggtga tgttccgcaa gaacgcggtg tatgttccga
    31141 tgtggtgatc cgtgaattgc gcagccagaa ggtcgatttg cagaaactgg ttcacgaaga
    31201 tatggcgaag aattttgccg attatccgca aaagtggaag ttaaagcgcc cggacagcaa
    31261 catcgatcac cgtcgggtgc ctaatctgga aacctggttt agccgccaca acaaaacacg
    31321 ccccatcagt aaaaatgccg gtgactatca agcgggcgat attgtctcct ggcgattaga
    31381 taacgggctg gcacatattg gggtggtttc agatggcttc gcccgcgacg gtacgccgct
    31441 ggtgatacat aacattggcg caggcgcgca ggaagaagat gtgctgttta gctggcggat
    31501 ggtggggcat tatcgttatt ttgttaaata agcgatcgcc ccacatgaag aaaaaattca
    31561 gatccttttt acactgacgg cttctttttt cttacggctc accagcgcca gtgccagcac
    31621 aatcagcaca ataccgctac cttcaacggc ccccggattc tcaccgagca gccaccagga
    31681 aaagagtacg ccgcaaacgg gaacggccag tgtgcttaag ctggcaatac tggcaggcaa
    31741 gtttttcaat acaaacaacc ataagctcca cgccagtgcc gtcgccagaa tcgcactgta
    31801 ggccagcgcc cagaacgcgg tgggctgcca gtcaatttca cgttgcggca ccagtaaagc
    31861 gaccacactc atcaccagcg ccgcatacag catctgccag gatgttaacg acaataaatc
    31921 cacgcgcgga tgacgggcat acagacgttt agcaacaatc gcgctcgccc cccaactgac
    31981 gccggagagg attgccagca tggcactttt catcgaagag aaatcgagtt gccacggctg
    32041 caacaccaaa aataagccga aagcggcaat cagaatcgcg aaatattgcc cacgtcgcag
    32101 gcgttcaccg agaaacaccg cggcgaaaat caccacccag aacggcatgg tatagctcag
    32161 gattgccacc ttccccgctc cgccgctgac cagcgcccac tgcgccaggc caaccatccc
    32221 gcaggtttgt aacagggcaa tggctaaggt gtatttaaac ggcgtcgggc gcattccgcg
    32281 accacgtaat aaaaggacga tgaataaaac gagagcgccg aaaatgcagc gtaaggcggt
    32341 gaagtcgaag gcaccgatgt agctggtgac ttgcttcatg aaaatccagc tataactcca
    32401 gataagtgtg agcacaacca ggcaactgat tgccagtggg ttgctctttc ctgcggcaga
    32461 catgagagat ccagtgtgta gttttcctgt ggacactata cgccgctgaa gaaggtcaga
    32521 ttacagcatg tcgaaacggt cgaggttcat cactttcacc catgccgcca cgaagtcttt
    32581 aacaaacttc tcgtgggcat cgctgctggc gtaaacttcc gctaccgcac gcaggacaga
    32641 gttagaacca aataccagat ccgcatggct ggctgtgtat ttcacttcgc cggtttcgcg
    32701 gtcacgtcct tcgaacagtt ctttcgattc gtcggtcgct ttccactcgt aacgcatatc
    32761 cagcaagttc acgaagaagt cattgctcaa tacgccaacg cggtcagtga agacgccgtt
    32821 tttgctgcca tcgaagttgg cacccagtac gcgcatcccg cccaccagcg cagtcatttc
    32881 cggcacggtc agcgtcagtt gctgggcttt gtcgatcagc agtgactcgg tggtggaaac
    32941 atccagacga gcgcgatagt tacggaaacc gtcagcaatt ggctccagca gttcgaacat
    33001 ctcaatgtca gtctgatcct gacgcgcatc aacgcgaccc ggcgcaaacg gtacatgaat
    33061 gctcaaacca gcggcgcttg cggctttctc aacgccaacc acacctgcca gcacgatgat
    33121 atccgccagc gaggctttac cagactcttt ctgaattttc tccagaactg gcagcgcacg
    33181 aacggctgcg gcgttcacat cccagtcgcg ctgtggcatt aatgccagac gcgcaccgtt
    33241 ggcaccaccg cgtttgtcgc caccacggaa ggtagaagca gacgcccagg ccaccgatac
    33301 cagctcgctg acagacagac cagaatccgc aatcgcaaat ttcagatcga taatgtcctg
    33361 ctcggtcggg ttgtagatcg gctgcggcag cggatcttgc cagatcagat cttctttcgg
    33421 tacttccggc ccgatgtaac gggatttcgg ccccatatcc ctgtgcgtca gtttgaacca
    33481 agcacgggca aaggcttcat tgaacgcctg cggatcgttg aggaaacgac gagagatctt
    33541 ctcgaactca ggatcaaaac gcagcgtcag gtcggtcacc agcattgtcg gtttacgttt
    33601 cttcgacgga tcaaacggat ccgggataat ttccggtgcg tctaccgctt cgaactggat
    33661 tgcgccagcc ggactgcggg tctgtaccca ctcatatttg aacaggttct cgaagaaata
    33721 gttgctccac tgggtcggcg tctgggtcca gactacttcc agaccagagg taatggcatc
    33781 tgcgccaacg ccgctgccgt aagtgctcgc ccagcctaaa ccttgttctt caatcggtgc
    33841 agcttctgga tcaggaccta cgtttgatgt cggaccggca ccgtgggttt tacccagcgt
    33901 gtgaccaccc gcaatcagcg ccacggtttc ttcgtcgttc atgcccatgt tgccgaaggt
    33961 cgcgcggata gctgctgccg cagaaagcgg ttcgccgctg tgatccgggc cttccgggtt
    34021 aacgtaaatc agacccatct cggttgcacc cagcggtgct ttcgccagcg cttccggatg
    34081 acggtgagtc agccaggctt tttcatcacc ccagttaaca tccagatccg gttcccagac
    34141 gtcttcacga ccggcaccaa aaccgaaggt acggaagccg gagttttcca gcgccacgtt
    34201 acccgcgagg ataaacaggt cggcccagga gattttctga ccatatttct gtttgattgg
    34261 ccacaacagg cgacgtgctt tatcgaggct tacattatcc ggccaggagt tcagcggtgc
    34321 aaaacgttgc tgaccacgac ccgcgccgcc gcgtccatcg attgaacggt aagtacccgc
    34381 gccgtgccag gccatacgaa taaacagacc ggcgtaactg ccccagtcgg caggccacca
    34441 cggctgagat tctgtcagca gggctttcag atcttttttc aggccgtagt aatctaattt
    34501 gctgaattct ttgcggtagt caaagtcctc acccagtggg ttagaacgat tagaatgttg
    34561 gtttaacagg tcaacacgaa gttgatttgg ccaccagtcg cgagtggttg tgcccgcccc
    34621 cgcactctgg tcgtgaccgc cctgatggaa cgggcatttg ccagtggctg tggtgttatg
    34681 gatatcgtct gacgtgctca tcaatgtgct cccctctaca gtgttaccgt tacgatacac
    34741 agcgttagag agaagttata attgaattaa tccacggatg cgatagttga gatcttacat
    34801 attgttggtt aaagagatgt agatcaaatt gatcgtaatt aagctttttt gattatgtcc
    34861 gaattcggac aaatgcttta taaaaaaggg ttttagcttc atatccttca agtaatgagg
    34921 gagaaaacaa ggctgataac cttattttcc cgccctcatt tcgaggcagc attttgtgct
    34981 ctgtttaaaa tttgtgatca ctgtgtgatt ttcacaaaag ccacactatt tataaaccag
    35041 gtcgaacccc cagcgtatgg caaatcgcgt aactcatttc agcacggtta agcgtataga
    35101 agtggaaatc tttcactcct tcacggctta aaatcttcac catatccatg gcaatattcg
    35161 cgccaaccag tttgcgggtt tcggcatcat catccagacc gtcgaacatt tgcgccatcc
    35221 acgccggaat acgcacgttg gtcatatcgg caaatttctt cgcctgttta aagttagata
    35281 ccggcaaaat tcccggaata atttccacat caatgcccgc cgatacacag cggtcacgaa
    35341 aacgcaggta gctttcgaca tcgaagaaga actgagtaat cgcgcggttg gctccggcat
    35401 cgactttgcg tttcagatta agcaaatccg cctgagcgct ttttgcttct gggtgaactt
    35461 ccggatacgc cgccacggag atatcgaaat ccgccacttc ttttaatagc gtcaccaggt
    35521 cagaagcata catttctggc ttaccacttc ccggcggcag atcgccacgc agcgccacga
    35581 tatgacgaat accgttattc cagtagtcgc gtgcaatggt gcgcaactcg tcgggcgtcg
    35641 catcaataca agtaagatgc ggtgccgctt ccagaccagt gcgatcttta atgcctttaa
    35701 taatgctgtg cgtacggtcg cgctcgccgg agttcgcgcc ataggtcacc gatacaaact
    35761 tcggtttcag gctgctaagg cgatcgatgg agttccacag ggtctgctcc atttcactgg
    35821 tacgcggcgg gaaaaactcg aacgaaacgt taatctgccc ctggacttct gccaggctct
    35881 gattcagggc atcccgctgg ctggcgtgaa aaaagctcat accttacctc atcaatcgct
    35941 tgtagttata tgttgtgttg tgcacatcta tccgtttaga cgtccagatg taaagatgaa
    36001 ggaaaagccg aagggcgtca accgaaaaat gaccaatgat ggtgaggaaa aatcagggaa
    36061 gatgaaaaaa cttcaggatg gtaagaaaaa gaaaatccgg tatgaaaagc aaaccggact
    36121 gcaaatatta actaaccatg tacttattgc ttcttgccgg attcgtcgta aacgcttcat
    36181 ccggcctaat cctatgataa ttcaatatat ttcattagaa accatagacc cgaaaacatg
    36241 agtaccgggc attattaaat ttctgaaatt acaacaactg tgccagccgg ttgatatccg
    36301 actgaatcgc cccggcggtg acgtcgcgcc ccgcgccagg cccacggatc accagcggat
    36361 tatcgcggta ccagcggctt tcgatggcaa agacgttatc gcatggcagc agtgatgcca
    36421 gcggatggtc ttcacgcacc gcttccacgc ccacacgcgc tttgccattg gcatcgaaac
    36481 gcgccacgta gcgcagcacc agccccattt cgcgggccgc ttccagccgt tgcaccatct
    36541 gctcgttaag ttcatcgcca ttttcaaaga aatggtcgat gctgccgcct tcgcaatggg
    36601 taggcaccag cgactccacg cgtacctgat ccggttcgat gttgtaacct gcttcacgcg
    36661 ccagaatcac cagcttgcgc atcacgtctt tgccagagag atcgtcacgc gggtcaggtt
    36721 cggttaagcc ctgctgccac gcctgatcca ccagctcggt aaacggcacg ctaccgtcga
    36781 attgcaggaa cagccaggag agcgtgccgg agaagatccc actgatcgac aaaatagtat
    36841 cgccgctgtc gatcagatcg cgcacggtgt ggttgatcgg caagcccgca ccgacggtgg
    36901 cgttgtatag ccagtgacgc ccggtttttt cgaaggcgtc gtggatctgg cgatatttat
    36961 tgctgtcgct ggctcctgcc agtttgttgg cgctaatgac gtggaaaccg tggctggcga
    37021 aatcgagata ctggtcagca agctgctggc tggcggtaac gtccagcacc actaaatcat
    37081 catacggatg ggcgcgcatc cacaggaaca gcgactcttc atcctgctcg accgcttcat
    37141 cgttgaagaa ggctaacgcg cggctggcgt ccagcccgtc ataactcaac aggctacggc
    37201 ggctgtccac cacacctgcc agcacaaatt caaagccggt acgtgccgaa agcgtgctct
    37261 gctcacgggc gaacagttcc agccagcggg aaccgatatt gcccttgccg aacaatacca
    37321 ggccgatgcg tttttccgcg cggaagacgg actgatgcag gccctgaatc aggctttcgg
    37381 tcgggccggt gcgcagtact gccaccagac tgatgccgtc atcggactgc caggtaaatt
    37441 cgaccggctg gcctttcagt tgctgccaga agcggtggca atgcagcggg ttacgggtga
    37501 cgcccgcccc gaccatcgcc accagcgcca gcccctgacg caggcgcagt tcgccaggta
    37561 atcccgcttc gtcgaggatt ttcagcgcac tgtcggccac ttctgaggtg tagcaaaatt
    37621 gcagtaactg gcgatcgtta tgcacgccaa ccgccagcgg gcgtacctgc gcgcgtttca
    37681 ggatttggtc gatctcttta tgcgccagtt tgaaatcctg actggcgggc acctgaaact
    37741 caatcaagca gacatcatcg tggctggtga caatacgcgc accagtaccg gaggccagca
    37801 cgcgttcaat gcgcgtggaa ccttgatccg gcgtgtagct acagcgcagt tgcaggtcga
    37861 tttcgctgcc agaaaccggc tgtaaagtac gggcgtgaag aacgggagcc gccagacgag
    37921 ccagttcgct ggcttcatcc agacgcagca acggcagcag acaggcatct ttcactttac
    37981 gcgggtcggc actgtatacc ccggcgacgt cgctccagat ggttacacga gaaacacccg
    38041 ccagcgcacc gatttgtgtc gcggaatagt cggaaccgtt acgccccagc agcaccgttt
    38101 caccggcgtt gttacggctg ataaacccgg tcaccaccag acgtttgccc ggatgttgca
    38161 ccagtagctg ttgcagcaac gggtaagaaa gcccttcatc aacctgcggt tgcgcagcgc
    38221 gttcagcgcg taaaaactcg cgggcatcaa gccaggccgc tggcagccct tgttgattaa
    38281 gcaccgcaga catcaggcgc gccgaccaca cttcaccgtg ccccaccact tccgcataca
    38341 ccgcgtcgtt aataccgctg tcgagcagtg ccgccaggcg ctccaaatcg ctgacaaaag
    38401 cgctaatgag gctatcggct tcttcagcgg gtagcagacc gctaatcaga tcgcactgat
    38461 agcgacgcag cgtttgttga acctgatgcg cagagagacg atcggtctgg cttagtttca
    38521 accagttaat caactggtta gtggtgctac cggcggcgga aaccaccatc atatcgtcag
    38581 gctgagagta ctccgccata atgcccgcga cacgcaaata acacttcaca tcagccagac
    38641 tactgccacc aaatttatgc agttgacgac ctttcgcccc tgcctgcgca atcacactca
    38701 tttttacccc ttgtttgcag cccggaagcc attttccagg tcggcaatta aatcttcgcc
    38761 atcttcaata ccggtggaga tacgcagcag cgtctcggag atcccggcgg cagcacgcgc
    38821 ttctggtgcc atgcctgcat gtgtcatggt tgcggcgtga gagattaaac tttccactcc
    38881 ccctaatgat tccgccagcg taaacaacga cagcccgccc aggaaacgac gcagcgtctg
    38941 ctcatcgcca tccagttcaa aactcaacat tgcgccaaag cctttttgct gacgcgcggc
    39001 aatttcatgc ccctgatttt ccggcagcga cgggtgatac agttttttca ccaacggctg
    39061 ggtttgcaga tatttcacaa tcgcctgcgc gttgcgctgc gccagctcca tacgcggcac
    39121 cagcgttcgc aacccgcgta gcagcagata gctgtcaaac gcgccgcccg tcacgccaat
    39181 attgtttgcc caccaggcaa gttcagtgac aacatccggg tctttagcaa tcaccacgcc
    39241 ggccaccacg tctgagtgac cgttcagata tttcgtgcat gaatgcaaca ccagatcggc
    39301 acctaatgcc agcggatttt gtaatgccgg gcttaagaag gtgttatcca ccacgctcac
    39361 cgccccgact tcccttgcca gatggcagat tttcgcaata tccacgacgc gtaacaatgg
    39421 attacttggg ctttctacca gtaccagttt gggtttttct gccagcgctg cccgtaatgc
    39481 ctgttcatcg ccttgatcaa caaacaacac gcgatagcaa ccgcgtttcg ccagactgtc
    39541 gaacaggcga tagctaccgc cgtagcagtc gtgcggcgca accagcagat cgccaggttt
    39601 caaaaagacg gtcgttacca ggtgaatcgc ggacatgccg gtattagtaa gtactgcacc
    39661 agcaccgcct tccagttctg ccagcgcacg ctgaaccaca tcgcgcgttg ggttgccgcg
    39721 acgcgagtaa tcatgcgcgc gcggttcatt aaatccggta aagttatagg tgctggaaag
    39781 atggatcggt gggacaacgc aaccatactg ttcgtcgtca tttaacccgc tacgcactgc
    39841 gatggtggcc tgtttacgcg tcatgtgatg aagttccctg ggctttgtcg gtgaaatgtc
    39901 aggcaccaga gtaaacattg tgttaatgga cgtcaataca tctggacatc taaacttctt
    39961 tgcgtataga ttgagcaaat cccaaatagc cgttaaaatt atatgcatta tcacgccgac
    40021 aggtgcatta cacgatgtca cggtaacgcc tgtacggtaa actatgcggg tttacggtca
    40081 gtacctacat taattgtgtg gtctgatctc aatttattga cgaagaggat taagtatctc
    40141 atggctgaat ggagcggcga atatatcagc ccatacgctg agcacggcaa gaagagtgaa
    40201 caagtcaaaa agattacggt ttccattcct cttaaggtgt taaaaatcct caccgatgaa
    40261 cgcacgcgtc gtcaggtgaa caacctgcgt cacgctacca acagcgagct gctgtgcgaa
    40321 gcgtttctgc atgcctttac cgggcaacct ttgccggatg atgccgatct gcgtaaagag
    40381 cgcagcgacg aaatcccgga agcggcaaaa gagatcatgc gtgagatggg gattaacccg
    40441 gagacgtggg aatactaaag cggaaaagag cggcgcggag tggaatcgcc tgatgcacta
    40501 cgcttatcag gcctacgtca tattgcaatt tattgaattt gcacgaactt gtaggccgga
    40561 taaggcgttc acgccgcatc cggcataaac aacgagcacg ttgtctgcga cccaccgctt
    40621 tttatacatg gacgtttaac tatgaaaaac aggctgctga tcctcagcct gctggtttct
    40681 gtacctgcct ttgcctggca gccacaaacc ggcgacatca tctttcagat ctctcgctca
    40741 tcgcaaagta aagcgatcca actggcgacc cattccgatt atagccacac cggtatgctg
    40801 gtgatacgca acaaaaagcc ctacgttttt gaagcggtcg gcccggtgaa atacaccccg
    40861 ctcaagcagt ggatcgccca tggtgaaaag ggcaaatacg ttgttcgccg cgttgaaggc
    40921 ggactgagtg ttgaacaaca gcaaaaactg gcgcaaacgg caaaacgtta tctcggtaaa
    40981 ccagtatgat ttcagcttct catggagcga cgatcgccag tactgttcgg aagtggtgtg
    41041 gaaggtttac cagaacgcgc tgggaatgcg cgtgggcgag cagcagaagt tgaaagagtt
    41101 cgatctcagc aacccgctgg ttcaggcaaa gctcaaagaa cgctacggca aaaatattcc
    41161 gcttgaggaa acggtggtct cgccacaagc cgttttcgac gcgccacaac tcaccacggt
    41221 tgccaaagag tggccgctgt tttcgtggta atggatgatg aaaaaaataa ttctccccgt
    41281 agtctgttgg ttgctttgta gttgcacgac ctttccgcaa gctgtcgctc cggtaaacgg
    41341 tgatgccttc aattagttga attaagcata taatactcgc ttttaaggtt gtttcatgat
    41401 cacagttaac cttcattgcc cccgttacca gtccgttcag gtttaccgtc acgggcagaa
    41461 cccaaaaaga catgatcgat tccgcggccg tgactgtcac cgggtatttc agctcagtta
    41521 ctgttacgag ccccgtaaac cgggagttaa agaccaaatc gctgaaatga ctttcaacgg
    41581 tgccggggtt cgcgatactg cccgtacgct gaaaatcggc attaatacag tcatccgaac
    41641 tttaaaaaac tctcgccacg aagaataacg tcatcagggc aagattacga aagcccgctc
    41701 cccgcaagga ctgacgccag atagtttctg tccatggctg cttttcgcat cttacgtctt
    41761 aaccctgcct tgaatacctt atcattcgtc aaaatattaa tagcaatgtg ccgtatccct
    41821 gaaaataatt ctgctgcatt tcctcttctt attttgcagt cgtcttcatt cattaccacg
    41881 tccagacgcc agtgcagctt attctccacg tgccagtggt ttcggattgc tgtggcgaac
    41941 ttctctgcgg ttaaatcagc agaactgata taatatctga ccgtcatttc tggctctttc
    42001 ttttgttctg ctattatgga ccgaaaggag actgccacgc ataatttctt cagccctttc
    42061 cattcaaacg tgaaatcaat aagttcatca gggacatcgc aaacaatatg aagacggatt
    42121 tcttctctgc cgtgactctt ttcactaatt gcgtaactgt catgctctgg attatttaat
    42181 tctttcagcg gaaatttttc ctcgaaggct ttattaagcc gcccctggtt tccttttaca
    42241 gcgaataaat aatcaccgcc ctgtttttgt atcttctctg caatatcttt ctggcatccc
    42301 atcgcatcag ttgtgatgat ttttccttta atatccagca tgttaagaag ttcaggaatg
    42361 gctgtaatct cattggattt ctcatccgtc ttaatctgcc cgagaaccag actgtgcatt
    42421 gttgagaacg cactaatgac atgaatcgct cccctgcggc gactcttgtc atgagagtgc
    42481 cggagcgttt ttccatcaat tgcaatgacg tctttatcat ctgaagaatg gcagtcacgc
    42541 atccagttaa taaagcactc gtgaaatttt gcaggactga tacaggatac aactctggca
    42601 atggtatcgt gaacaggaat accattttca aaatcaccat attgcttcaa aaaatcgaga
    42661 tgtgtttccc caaaatcctc tatatcttcc caaccctctg caccagaaat aacggcacaa
    42721 atagtcaaca gtagaatatc cgataattta tgttccactt tccaggcttg tctgtaatcg
    42781 gggataatag aaatatgttc catcaatttt ttaagttcca ttttgttctc cttaattatg
    42841 taaggagtat ttgatcatgt ataagcaata aaaaacagct ttaggtaata aggaatatct
    42901 caatttttaa acataaaatg cgaattattt agtacaaaaa gtgaacttct gatgatcttt
    42961 ccctgataac gtcatccccg gtcgctcatg ctgatgtggc actcatctgc gaacttagtc
    43021 agcaatggag ctttgtcggc agtaaagcgc gacagcactg gctctggtac gtgtacaaca
    43081 cgaaaactgg tggtgttctg gcctacactt ttggcccccg gactgacgaa acctgtcgtg
    43141 aattgctggc gctgcttacc cttttaccat cggcatgttg accactgacg aatggggtag
    43201 ttacgctaga gagttaccga aggagaagca tctgactggt aagattttta ctcagcacat
    43261 tgagcgtaac aatctgaccc tgagaatcca aatcaaacgt ctggcccgca gaaccatctg
    43321 tttctcgcgt tctgtagaac ttcatgaaaa agtcatcggt gcttttatcg aaaatatatg
    43381 ttctactaat tggagtcatc acccttctga tgagcgttcc ttggatgatt accagactga
    43441 atacacagcc aaagattttt acctcattct gctctttttt ctcaaatgac atatattata
    43501 ttttacatca tattcatagg catatgacat tcccccgctc cccattatgt cattgtgggt
    43561 tgatgttggg ctttcataaa aaaaacatct ttttttgaac tagcattaat tatatttact
    43621 ttatatatta aaatattttc tccatctgga aatattttag ccacacaata taaagcagct
    43681 gaatccgaat tacttaaaaa tatattatca tcacccataa ctccagccat taaattacta
    43741 gagactaaag caaggaaata acaacattgt attgccttca ttttaattac tcccttgcct
    43801 gataattgca actccattcc ctttagcttt gggattatat tttagatagg tgttatttgg
    43861 tgttcccaag taactactgt attctttttt tcccattcca ttcatataag aattcgttaa
    43921 atctttgctt gaaaaattta gactatcata aacatcattt tcttttgtta ctttatttcc
    43981 tttatcgtca gagtaaaaac cgtgagtgtg ataatcgcct actctctctg aaccttcagg
    44041 gcattttata tttcgcaagt ctacactatc attatcattt gaacttatcg gattcatggg
    44101 gaaatattca ccttgcttct tacatattag tccaccatat tctttattct cgttaattga
    44161 ttctccatta cacattgcca atgcaaatat tccaatatca tctatatttt ttgatttaaa
    44221 ttcatataat cctaatggat ccatgctatt caccgggctc agcggatatg tatacaggtt
    44281 ccatcccccc ttcagcccaa tcggatcctg agtgatatac cgcccctgca g
//
LOCUS       DAJVTL010000020        43333 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.020, whole genome shotgun sequence.
ACCESSION   DAJVTL010000020 DAJVTL010000000
VERSION     DAJVTL010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 43333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43333
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.020"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(41..118)
                     /locus_tag="OQQ26_001032"
                     /pseudo
     CDS             complement(41..118)
                     /locus_tag="OQQ26_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
     gene            complement(122..481)
                     /gene="yeaR"
                     /locus_tag="OQQ26_001033"
     CDS             complement(122..481)
                     /gene="yeaR"
                     /locus_tag="OQQ26_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
                     /protein_id="HCS1856568.1"
                     /translation="MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLS
                     VMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAP
                     EVLMEGAQQRKVIHNGK"
     gene            complement(652..1290)
                     /gene="leuE"
                     /locus_tag="OQQ26_001034"
     CDS             complement(652..1290)
                     /gene="leuE"
                     /locus_tag="OQQ26_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HCS1856569.1"
                     /translation="MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGY
                     LAACGVFIGDAVLMFLAWAGVATLIKTTPILFNIVRYLGAFYLLYLGSKILYATLKGK
                     NSEAKSDEPQYGAIFKRALILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILATTL
                     ELVSFCYLSFLIISGAFVTQYIRTKKKLAKVGNSLIGLMFVGFAARLATLQS"
     gene            complement(1417..2340)
                     /gene="dmlR"
                     /locus_tag="OQQ26_001035"
     CDS             complement(1417..2340)
                     /gene="dmlR"
                     /locus_tag="OQQ26_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310535.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DmlR"
                     /protein_id="HCS1856570.1"
                     /translation="MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLE
                     QTLKVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISS
                     FGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARK
                     LATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKV
                     TGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVS
                     RLATSAKVRITVEFLRQYFAEHYPNFSLEHA"
     gene            2443..3528
                     /gene="dmlA"
                     /locus_tag="OQQ26_001036"
     CDS             2443..3528
                     /gene="dmlA"
                     /locus_tag="OQQ26_001036"
                     /EC_number="1.1.1.83"
                     /EC_number="1.1.1.85"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional
                     D-malate/3-isopropylmalate/tartarate dehydrogenase"
                     /protein_id="HCS1856571.1"
                     /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFALSFEQME
                     WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ
                     YVNLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES
                     VFTRRGVDRILRYAFELAQSRPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRW
                     DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP
                     SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA
                     HGPKTPDMKGNATTPQVADAICKIILR"
     gene            3779..5390
                     /gene="yeaV"
                     /locus_tag="OQQ26_001037"
                     /pseudo
     CDS             3779..5390
                     /gene="yeaV"
                     /locus_tag="OQQ26_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310537.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter YeaV"
     gene            5422..6546
                     /gene="yeaW"
                     /locus_tag="OQQ26_001038"
     CDS             5422..6546
                     /gene="yeaW"
                     /locus_tag="OQQ26_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaW"
                     /protein_id="HCS1856572.1"
                     /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA
                     KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK
                     AKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMAPN
                     ATSVEDQLPGLGAKVLEACPKVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPG
                     FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI
                     KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK
                     GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD"
     gene            6602..7567
                     /gene="yeaX"
                     /locus_tag="OQQ26_001039"
     CDS             6602..7567
                     /gene="yeaX"
                     /locus_tag="OQQ26_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaX"
                     /protein_id="HCS1856573.1"
                     /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVI
                     VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTP
                     NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV
                     QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIAAD
                     TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
                     TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
     gene            complement(7621..8736)
                     /gene="rnd"
                     /locus_tag="OQQ26_001040"
     CDS             complement(7621..8736)
                     /gene="rnd"
                     /locus_tag="OQQ26_001040"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707318.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HCS1856574.1"
                     /translation="MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD
                     GEHLALIDPLGITDWSPLKSILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
                     AAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
                     KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
                     WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVE
                     KAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
                     NWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
     gene            complement(8818..10503)
                     /gene="fadD"
                     /locus_tag="OQQ26_001041"
     CDS             complement(8818..10503)
                     /gene="fadD"
                     /locus_tag="OQQ26_001041"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HCS1856575.1"
                     /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALYNGYRMQYVKPELVPEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG
                     GQNLLITSPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDGTDEIIKNGWLHTGDIAVMDEEGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL
                     TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(10708..11289)
                     /gene="yeaY"
                     /locus_tag="OQQ26_001042"
     CDS             complement(10708..11289)
                     /gene="yeaY"
                     /locus_tag="OQQ26_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein YeaY"
                     /protein_id="HCS1856576.1"
                     /translation="MAVQENVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRV
                     MSAPQLYVGQEARFGGKVVVVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
                     GFLDPVDFRGQLVTVVGPITGTVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
                     DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE"
     gene            complement(11329..12024)
                     /gene="tsaB"
                     /locus_tag="OQQ26_001043"
     CDS             complement(11329..12024)
                     /gene="tsaB"
                     /locus_tag="OQQ26_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HCS1856577.1"
                     /translation="MRILAIDTTTEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
                     ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
                     WRKNGATRVLAAIDARMGEVYWVEYQRDENGIWHGEETEAVLKPELVHERMQQLSGEW
                     VTVGTGWQAWPDLGKESGLVLRDGEVLLPAAEDMLPIACQMFAEGKTVAVEHAEPVYL
                     RNNVAWKKLPGKE"
     gene            complement(12082..13992)
                     /locus_tag="OQQ26_001044"
     CDS             complement(12082..13992)
                     /locus_tag="OQQ26_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HCS1856578.1"
                     /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAITQAIEKGQPLVVE
                     AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
                     RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
                     ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTSLSVADKFKELMAQKPGSW
                     IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGCAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCCLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSSR"
     gene            14124..14468
                     /locus_tag="OQQ26_001045"
     CDS             14124..14468
                     /locus_tag="OQQ26_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HCS1856579.1"
                     /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
                     QIDAVLGKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
     gene            14890..15188
                     /locus_tag="OQQ26_001046"
                     /pseudo
     CDS             14890..15188
                     /locus_tag="OQQ26_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416324.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1889 family protein"
     gene            complement(15308..15487)
                     /locus_tag="OQQ26_001047"
     CDS             complement(15308..15487)
                     /locus_tag="OQQ26_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HCS1856580.1"
                     /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
                     HSGERIVARFEDEDE"
     gene            15561..16922
                     /gene="pabB"
                     /locus_tag="OQQ26_001048"
     CDS             15561..16922
                     /gene="pabB"
                     /locus_tag="OQQ26_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HCS1856581.1"
                     /translation="MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
                     RFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
                     QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
                     NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF
                     HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
                     LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
                     PAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
                     SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVNKILRQ
                     LEK"
     gene            16926..17504
                     /locus_tag="OQQ26_001049"
     CDS             16926..17504
                     /locus_tag="OQQ26_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HCS1856582.1"
                     /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP
                     GLLLTQRSIHLRKHAGQVAFPGGAVDDTDATVIAAALREAEEEVAIPPSAVEVIGVLP
                     PVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
                     HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP"
     gene            17688..19052
                     /gene="sdaA"
                     /locus_tag="OQQ26_001050"
     CDS             17688..19052
                     /gene="sdaA"
                     /locus_tag="OQQ26_001050"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HCS1856583.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSITR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGQ
                     HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
                     AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
                     VQCD"
     gene            19183..20781
                     /locus_tag="OQQ26_001051"
     CDS             19183..20781
                     /locus_tag="OQQ26_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1856584.1"
                     /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
                     RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV
                     QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
                     AGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
                     SQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLG
                     LAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTR
                     YVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITE
                     RDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD
                     AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPIPLRDFP
                     KWLAGSQPPPARHNGHITPIMPLR"
     gene            complement(20785..22335)
                     /gene="yoaE"
                     /locus_tag="OQQ26_001052"
     CDS             complement(20785..22335)
                     /gene="yoaE"
                     /locus_tag="OQQ26_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HCS1856585.1"
                     /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
                     TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPIPE
                     GAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPV
                     CRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS
                     FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQA
                     LDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKE
                     QPAHDEDE"
     gene            22798..23769
                     /gene="manX"
                     /locus_tag="OQQ26_001053"
     CDS             22798..23769
                     /gene="manX"
                     /locus_tag="OQQ26_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HCS1856586.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
                     IARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
                     YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
                     HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
                     VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
     gene            23832..24632
                     /gene="manY"
                     /locus_tag="OQQ26_001054"
     CDS             23832..24632
                     /gene="manY"
                     /locus_tag="OQQ26_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIC"
                     /protein_id="HCS1856587.1"
                     /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
                     SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMIINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
     gene            24645..25496
                     /gene="manZ"
                     /locus_tag="OQQ26_001055"
     CDS             24645..25496
                     /gene="manZ"
                     /locus_tag="OQQ26_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020804907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HCS1856588.1"
                     /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVST
                     ITGQDGQTRVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     ACGLLGL"
     gene            25550..26008
                     /locus_tag="OQQ26_001056"
     CDS             25550..26008
                     /locus_tag="OQQ26_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HCS1856589.1"
                     /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLQRGR
                     IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA
                     NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ"
     gene            26437..27003
                     /gene="mntP"
                     /locus_tag="OQQ26_001057"
     CDS             26437..27003
                     /gene="mntP"
                     /locus_tag="OQQ26_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HCS1856590.1"
                     /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR
                     HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
                     IIGKKAEILGGLVLIGIGVQILWTHFHG"
     gene            complement(27000..27809)
                     /gene="rlmA"
                     /locus_tag="OQQ26_001058"
     CDS             complement(27000..27809)
                     /gene="rlmA"
                     /locus_tag="OQQ26_001058"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HCS1856591.1"
                     /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA
                     FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYALCK
                     AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY
                     PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
     gene            complement(27975..28184)
                     /gene="cspE"
                     /locus_tag="OQQ26_001059"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(27975..28184)
                     /gene="cspE"
                     /locus_tag="OQQ26_001059"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HCS1856592.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            complement(28197..28340)
                     /locus_tag="OQQ26_001060"
     CDS             complement(28197..28340)
                     /locus_tag="OQQ26_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HCS1856593.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
                     KTI"
     gene            complement(29010..29297)
                     /locus_tag="OQQ26_001061"
     CDS             complement(29010..29297)
                     /locus_tag="OQQ26_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebO family protein"
                     /protein_id="HCS1856594.1"
                     /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKADKKTVESQKSDEDEDIIRLVAER"
     gene            complement(29372..29515)
                     /gene="mgrB"
                     /locus_tag="OQQ26_001062"
     CDS             complement(29372..29515)
                     /gene="mgrB"
                     /locus_tag="OQQ26_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HCS1856595.1"
                     /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
                     IPW"
     gene            29674..29913
                     /locus_tag="OQQ26_001063"
     CDS             29674..29913
                     /locus_tag="OQQ26_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856596.1"
                     /translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENATGLGLQCTYLT
                     ARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG"
     gene            complement(30057..30848)
                     /gene="kdgR"
                     /locus_tag="OQQ26_001064"
     CDS             complement(30057..30848)
                     /gene="kdgR"
                     /locus_tag="OQQ26_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HCS1856597.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
     gene            31025..32398
                     /locus_tag="OQQ26_001065"
     CDS             31025..32398
                     /locus_tag="OQQ26_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1856598.1"
                     /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANIALPTIAT
                     DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD
                     SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA
                     AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL
                     ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT
                     SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG
                     LLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE
                     RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI
                     TQPRSRA"
     gene            complement(32444..33325)
                     /gene="htpX"
                     /locus_tag="OQQ26_001066"
     CDS             complement(32444..33325)
                     /gene="htpX"
                     /locus_tag="OQQ26_001066"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HCS1856599.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF
                     GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
                     TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS
                     RHREFYADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRTGEYLK"
     gene            complement(33517..35565)
                     /gene="prc"
                     /locus_tag="OQQ26_001067"
     CDS             complement(33517..35565)
                     /gene="prc"
                     /locus_tag="OQQ26_001067"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HCS1856600.1"
                     /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGD
                     ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA
                     ELNALWDSKVKFDELSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI
                     SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT
                     RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL
                     RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA
                     FEPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
                     ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK
                     "
     gene            complement(35585..36283)
                     /gene="proQ"
                     /locus_tag="OQQ26_001068"
     CDS             complement(35585..36283)
                     /gene="proQ"
                     /locus_tag="OQQ26_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HCS1856601.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
                     RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
                     PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
                     SGMSLIVRAEHLVF"
     gene            complement(36380..36877)
                     /gene="msrC"
                     /locus_tag="OQQ26_001069"
     CDS             complement(36380..36877)
                     /gene="msrC"
                     /locus_tag="OQQ26_001069"
                     /EC_number="1.8.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine (R)-S-oxide reductase"
                     /protein_id="HCS1856602.1"
                     /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
                     AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
                     ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF
                     ASVAG"
     gene            37007..38290
                     /gene="yebS"
                     /locus_tag="OQQ26_001070"
     CDS             37007..38290
                     /gene="yebS"
                     /locus_tag="OQQ26_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HCS1856603.1"
                     /translation="MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEIN
                     SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
                     MQGIWQMTKQGDAITGSMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
                     EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
                     PQRPATRRNEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL
                     LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
                     LLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
     gene            38259..40892
                     /gene="yebT"
                     /locus_tag="OQQ26_001071"
     CDS             38259..40892
                     /gene="yebT"
                     /locus_tag="OQQ26_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding membrane homeostasis protein YebT"
                     /protein_id="HCS1856604.1"
                     /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQD
                     RGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGD
                     LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG
                     SRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH
                     SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL
                     LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV
                     LTLTLTAPESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS
                     LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY
                     ASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY
                     PEYIQTFARGGTRFSVVTPQISAAGVEHLDTILQPYINVEPGRGNPRRDFELQEATIT
                     DSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
                     QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK
                     HFLLQESEPKEWREWGTALPK"
     gene            40972..42411
                     /gene="rsmF"
                     /locus_tag="OQQ26_001072"
     CDS             40972..42411
                     /gene="rsmF"
                     /locus_tag="OQQ26_001072"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HCS1856605.1"
                     /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN
                     TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDDEDALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHA
                     NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD
                     LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD
                     REAGQIRQAAAGVGLNWDENLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHN
                     KGYRWQHEAVIALASPDNMNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI
                     GLAKRIGSRLKNSYPRELVRDGKLFTGNA"
     gene            42528..42752
                     /locus_tag="OQQ26_001073"
     CDS             42528..42752
                     /locus_tag="OQQ26_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HCS1856606.1"
                     /translation="MKTSVRIGAFEIDDGESPGDRTLTIPCKSDPDLCMQLDAWDAET
                     SIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
     gene            42857..43048
                     /locus_tag="OQQ26_001074"
     CDS             42857..43048
                     /locus_tag="OQQ26_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HCS1856607.1"
                     /translation="MFALVLFVCYLDGGCEDIIVDVYNTEQQCLYSMSDQRIRHGGCF
                     PIEDFIDGFWRPAQEYGDF"
     gene            complement(43049..>43333)
                     /locus_tag="OQQ26_001075"
     CDS             complement(43049..>43333)
                     /locus_tag="OQQ26_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein phosphatase"
                     /protein_id="HCS1856608.1"
                     /translation="LPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRL
                     GERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ"
BASE COUNT        10548 a        11109 c        10644 g        11032 t
ORIGIN      
        1 tatttcagga aggagtgtcc gttaaactca ggctacctca cggcgtctct gtttcataat
       61 cgacagaaac gccattgctg ttattggtga cggtcacggt atacgttgct ttgcccatga
      121 ttcatttccc gttatgaatg actttccgtt gttgcgcacc ttccatcagg acttcaggag
      181 ccacgaagaa gtcaatgttg aaataagtat cgtcagtcat ggcttcaatg ttgtgccact
      241 tttctggagg gaacaccgca aactgccccg cttcgataag gatcacctga tcaggctctg
      301 cactgtgttc atcagcgtag ccgagatatt tgaccgcccc atgcataacg gaaaggcgtg
      361 ggtaaacccc cgggcgcgtt cctttatcaa gatgacgttc gaatatgccg gcaggcgcag
      421 tttgtttatt ccagaaaggc gttgagcgcg tatgaatata attctgtggg atttgcagca
      481 tctttttccc tccttcgttg aatgcgctga aaacggtatt ccagccgttt cagagtacgc
      541 ctgataattt gcattttaaa taccatttat tggttatttt ttagcatcat atcagagaag
      601 aatcagggag gattacaagt gggaagcccg cgacaacgcg ggctgaatgt atcaggattg
      661 cagcgtcgcc agtcgggcag cgaaacccac gaacatcaaa ccaatcagtg agttgcccac
      721 tttagccagt ttctttttgg tacgtatgta ctgcgtgaca aaagcaccag aaataatcag
      781 gaagctcaaa tagcagaaac tcaccagttc cagcgtcgtc gccagaataa agaatgaaat
      841 tcccgtatgt ggggcattaa catcgataaa ctgtacgaaa aacgacacat agaacaaaat
      901 ggctttcgga ttagtcaggc tcaaaattaa cgcgcgttta aaaatagcac cgtattgggg
      961 ctcatcggac ttggcctcgc tatttttacc cttcagggtc gcgtaaagaa ttttactccc
     1021 cagatagagc aaataaaacg caccaagata acgtacaatg ttgaataata tcggggtagt
     1081 cttaattaat gtcgccactc cagcccatgc cagaaacatc aataccgcat cgccaataaa
     1141 tacaccgcag gccgcaagat aaccgccttt cataccgcta ctgacgctat ttttgagtac
     1201 aaacagggta tttggccctg gcaccaacac aataaaaatg gccccaacca gataggtcca
     1261 gtaattcaga accccgtatt cagcgaacac attaacctct ttaattatct ttcgatcatg
     1321 cgcgattaaa ggtgaatatg ctaaccaatc tgtagcggct tagaaaggag aaaatcaggt
     1381 tttaacctga tatcaacccg ataagtgaat cattaatcag gcatgctcca gtgaaaaatt
     1441 cgggtagtgc tcggcaaaat actggcgtaa aaattctacc gttatccgca ctttcgctga
     1501 cgtcgccagc cttgaaacat aaacagccca gacgttcgct ggctggtaat attccggtag
     1561 cacttgcact aaatgaccac tggcaatgtt ttcgctaaca tcccaccagg aacgcagagc
     1621 aatcccctgc ccatcgagac accactgatg gacaatttct ccatgattag acgacagtgg
     1681 gccggtgact ttaatcgcat ggtggccttc tttattgcgt aattgccaga caccaaaagg
     1741 atgatcgcgc tctttaatga ccaggcacgg caatgcagaa agatcggtta aatgtttcgg
     1801 cgcaccatgt tgcgcaataa attccggcga cgcgcagaga atgcggtaat tagtcgccag
     1861 tttgcgggcg attaaattag gtgcgatgtc atcgccaatg cgaatatcga gatcgacacc
     1921 ttcattgacc aaatcgacca accggtcttc cacatcaaaa cgtaattcca gttgcggata
     1981 cgccttcgcc agcgctgata acgccggagc caccacctgt cgtccaaaac caaagctgct
     2041 gataatacgc agcatcccct ggggcacctg acgcacgtca gaaagttcgt ccatcatctg
     2101 accgacatcc tgcaaaatcc gctgcgccca ttcataaatc cgctctcctt cttcggtaat
     2161 ggtgacgcgg cgggtggtgc ggtgtaacaa caccaccttt agcgtttgct ccagcaaggc
     2221 gatacgcttg ctgacgaacg ccggtgaaac gcccagttct tccgccacgg cggcaaaacc
     2281 agcccgacga gccaccagca taaagacgcg caaatcgttc agcagcggta aattattcat
     2341 gattcgtgtt ttatgtttca ccagttacgg ggattaattc cttttcagtc aattatagga
     2401 tggtgatgtt gtcaattttg atggtcagga agtgagaacc caatgatgaa aacgatgcgt
     2461 attgctgcga tcccgggaga cgggattggc aaagaagtcc ttcctgaagg aattcgcgtg
     2521 ttacaggctg ccgctgagcg ctggggcttc gccttgagtt ttgagcaaat ggagtgggcg
     2581 agctgcgagt attacagcca tcacggtaaa atgatgccgg acgactggca tgagcaactt
     2641 agccgtttcg acgccatcta ttttggtgcc gtcggctggc cggataccgt tccggaccat
     2701 atttcgttgt ggggttcgct gctgaaattt cgtcgtgaat tcgaccagta cgtcaacctg
     2761 cgcccggttc gtctctttcc tggcgttccc tgcccgctgg cgggaaaaca gcctggcgac
     2821 atcgattttt acgtggtcag ggaaaacacc gaaggcgaat attcctcgct cggcggtaga
     2881 gtgaatgaag gtacagagca tgaagtcgtc attcaggaat cggtatttac gcgtcgtggt
     2941 gtcgatcgca ttttgcgtta tgccttcgaa cttgcacaaa gccgcccacg taagacgcta
     3001 acttctgcca ctaaatcgaa cggtttagcc atcagcatgc cgtactggga tgagcgagtg
     3061 gaagcaatgg ccgagaatta cccggagatc cgctgggaca agcagcatat tgatattctc
     3121 tgcgcacgtt ttgtgatgca gccggaacgc ttcgatgtgg tggtggcgtc caatttgttt
     3181 ggcgatatcc tttccgatct tggcccggcc tgcaccggca ccattggcat tgccccatcc
     3241 gctaatctga atccggaacg cactttcccg tcgctcttcg agcctgtcca cggttccgcg
     3301 ccggatatct acgggaaaaa tattgctaac cctatcgcca cgatttgggc cggggcaatg
     3361 atgctcgatt ttctcggcaa tggcgatgag cgtttccagc aagcgcataa cggtattctg
     3421 gcagcaattg aagaagtgat tgctcacggg ccgaaaacac cggatatgaa aggcaatgcc
     3481 accacgccac aggttgccga cgcgatttgc aaaattattt tgcgttaagg tcaaaccagt
     3541 ttatttgaac cgcgtcactg acgcggtttt tttattcgtt ctttgcagtt aataacctgc
     3601 gtcatttcac cttttattgt ttccgtttcg tgttttatgg ctttccgtat tcttaattgt
     3661 ttaatttatg taacatgcaa ataatcaatt tgttaaacac aacatgcaac tcattaccct
     3721 gcaaataatt acaactggca aaagccagag acgggctttt atgcccagga gatgactcat
     3781 gatgagcaat gttaagaaaa aagatgtgcc gctgataagc atcagcctgg tggccattct
     3841 tttcatcgca gctgcattaa gccttttccc acaacaatcg gccgacgcgg ccaacgcaat
     3901 atacactttt gttacgcgta tgttaggttc cgccgtacag gtattggttt tgctggcaat
     3961 gggactggtg atttatttag ccaccagtaa atacggcaat attcgtcttg gcgaaggaaa
     4021 accggaatac agcacgctct cctggctgtt tatgtttatt tgtgccggtt taggttcttc
     4081 tacgctttat tggggggttg ctgaatgggc ctattattat caaacgcctg gattaaatat
     4141 cgcaccgcgt tcacaacagg cactcgaatt tagcgttccc tactctttct tccactgggg
     4201 gcatcagcgc ttgggcaact tatacgctgg cctcattaat catggcttat cactttcatg
     4261 tacggaaaaa taaggggctg agcctttccg gcattattgc tgctattacc ggcgttcgcc
     4321 cgcaaggccc atggggaaaa ctggtcgatt tgatgttcct gatcgccact gtcggcgcgc
     4381 tgactatttc ccttgtcgtc accgccgcaa cctttactcg tgggctttcc gcgctgaccg
     4441 gtttacccga taacttcacc gtacaggcat ttgtgatcct gctttccggc ggcatttttt
     4501 gcctaagctc atggataggt atcaacaacg gtttgcaacg tctgagcaaa atggttggct
     4561 ggggcgcgtt cctgctgcca ttactggtgc tgattgtcgg tccaaccgaa tttattacca
     4621 acagcatcat caatgccatc ggcctgacca cgcaaaactt cctgcaaatg agcttattca
     4681 ccgatccgct tggcgatggt tcatttaccc gcaactggac cgttttctac tggctgtggt
     4741 ggatctcata cacccctggc gtagcaatgt ttgtcacccg cgtttcccgc ggtcgtaaga
     4801 ttaaagaagt tatctgggga ctgatcctcg gcagcaccgt cggttgctgg ttcttctttg
     4861 gcgtaatgga aagctatgcc attcatcagt ttatcaatgg cgtaatcaac gtcccacagg
     4921 tgctggaaac actgggcggc gaaacagctg tgcagcaagt tctgatgtcg ttgccagccg
     4981 gtaaattgtt cctcgccgca tacctgggcg tgatgattat tttccttgcc tcgcatatgg
     5041 atgcggtggc ctacaccatg gctgcgacca gtacgcgtaa tctccaggaa ggtgacgatc
     5101 ctgaccgtgg gctgcgtctt ttctggtgcg tggtgatcac tctgatcccg ctttccatct
     5161 tgtttaccgg tgcttcgctg gaaacgatga aaaccaccgt cgtgctcaca gcccttccct
     5221 tcctcgtcat tttactggtg aaagtcggcg gatttattcg ctggctgaaa caggattacg
     5281 ccgacattcc ggctcatcaa gttgaacatt atctcccgca gacaccggtt gaagccccgg
     5341 aaaaaacgcc agtgctccct gcgggaaccg tattcaaagg cgacaactga gcgccatcat
     5401 cctaacgata aaggtaaccc tatgagcaat ctgagccctg actttgtact acccgaaaat
     5461 ttttgcgcta acccgcaaga ggcgtggacc attcctgccc gtttttatac cgatcagaac
     5521 gcctttgaac acgaaaaaga gaacgtcttc gccaaaagct ggatttgcgt cgctcacagc
     5581 agcgaactgg cgaatgccaa tgattatgtg acgcgtgaga tcattggcga aagcatcgtg
     5641 ctggtacgtg gtcgtgataa ggttttgcgc gcgttctata acgtgtgtcc gcaccgtggt
     5701 catcagttgt tgagcggtga aggaaaagca aaaaatgtga ttacctgccc atatcacgca
     5761 tgggcattca aactcgatgg caatctggcc catgcacgta actgcgaaaa cgtcgccaat
     5821 ttcgatagcg acaaagcgca actggttccg gtgcgtctgg aagaatatgc cggattcgtc
     5881 ttcatcaaca tggcccccaa cgccaccagc gtagaagatc agttacccgg tctgggcgcg
     5941 aaagtgctgg aagcctgccc gaaagtccac gatctgaaac tggcggcccg ctttaccacc
     6001 cgcacgcctg ccaactggaa gaacattgtc gataactatc tcgagtgcta tcactgtggt
     6061 ccggcgcatc caggtttctc cgactccgta caggttgatc gttactggca caccatgcac
     6121 ggtaactgga cgctgcaata cggtttcgcc aaaccgtccg aacagtcgtt taaatttgaa
     6181 gagggtacgg atgcggcatt ccacggtttc tggctgtggc cgtgcacgat gctgaacgtc
     6241 accccgatca aagggatgat gacggtcatt tatgaattcc cggtggattc tgaaactacc
     6301 ctgcaaaact acgatattta cttcaccaat gaagagttaa ccgacgagca aaaatcgctg
     6361 attgagtggt atcgcgatgt gttccgtccg gaagatttac gtctggttga aagcgtacag
     6421 aaagggctga aatcgcgtgg ctatcgtggt caggggcgca tcatggccga cagtagcggt
     6481 agcggcattt ccgaacatgg tatcgcccat tttcataatc tgctggcgca ggtatttaag
     6541 gactaatgac atcggcggcg gtattttccg ccgccgggct gatttttgat ggagtacagc
     6601 aatgtcagac tatcaaatgt ttgaagtaca ggtgagtcag gtggaaccgc ttaccgaaca
     6661 ggtgaaacgc ttcacgctgg tggcaaccga tggcaaacca ttacctgcgt ttactggagg
     6721 aagtcacgtc attgtgcaga tgagcgatgg tgataaccag tacagcaatg cgtattcact
     6781 actgagttcg ccgcatgaca cctcttgtta tcagattgcc gttcggctgg aggaaaactc
     6841 gcgcggcggt tcccgctttt tgcatcagca ggtaaaagtg ggcgatcggt taacgatttc
     6901 aacgcctaat aacctgtttg cgctaattcc ctcagccaga aagcatctgt ttatcgcggg
     6961 cggtattggt atcacccctt tcctgtcgca catggcagag ctgcaacaca gcgacgtcga
     7021 ctggcagcta cattactgct cgcgaaatcc agaaagttgc gcatttcgtg atgagctagt
     7081 ccagcatccg caggctgaga aagtccattt gcatcattca tcaaccggaa cacgactgga
     7141 attagcgcga ttattggcgg atatcgaacc tggcacacac gtttatacct gtggccccga
     7201 ggcgctaaat gaagcggtaa gaagtgaagc tgcgcgtctg gacatcgccg ccgatacgct
     7261 gcactttgag caatttgcta tcgaagacaa aaccggcgat gcctttaccc tggtgcttgc
     7321 ccgttccgga aaagagtttg tggtgccgga agagatgact attttgcagg ttattgaaaa
     7381 taataaagcc gcgaaagtgg aatgtttatg tcgtgaaggg gtatgcggaa cctgcgaaac
     7441 agcaatactg gaaggtgaag ctgaccatcg ggatcagtat tttagcgatg aagagcgtgc
     7501 cagccagcaa agtatgttga tctgttgttc gcgtgcgaag ggtaaacgcc tggtgttgga
     7561 tttgtagttt gccgaagccg gatgtggcgc tgagcgcgcc cagtccggct tcggaagatt
     7621 ttactgcgga tattcctgca ataaattgtg taatgcttcc gccatcagct caccacgcca
     7681 gccggaaatc agctccggca aattgttctg cggtttcagt ttccagtgcc agttcagcag
     7741 ttggttgatt tgccgacgcg atgccagcaa ttcggcgctg atcttgtgcg tttcgctcac
     7801 gtcagtaatc agcgacttaa tcgctttaaa cgctttacga taacccggca tgtccatcag
     7861 gttaagcatc ggctgcggta aggcatcttc cggcaatgtc tgcgcttttt ccaccagcgc
     7921 cagcagcgtt ttaccgtgaa agcggatttc gctaccggat aaacccaggc tgtccagttc
     7981 gcctaaactt cccggcatat aacgcgcgac cgaccacaaa tgctcttcac gcacgacaaa
     8041 gttcaccgcc agatcacgct ctcgcgcctt gcgcagtcgc cagtcggcta acagttgcag
     8101 acaggccagt tggcgtgtgc gtaactgcca ggcattggtg atatcacgcc aggcatcttc
     8161 cggcgcaacg acttcctgac gacgcatttg catcaggcgg cattcatcca gcgccgcagg
     8221 tagccagccg gaggcctccg tttctaccat aagcttggcg gtgatcggta acagatacca
     8281 gacatccgcc gctgcgtatt cacactgacg ttcggtcagc ggtctggcca gccagtcggt
     8341 gcgcgattca ctcttgtcca gcgtaacgcc ggaatactct tccaccatgg aagcgaaacc
     8401 ccatgacatc gggcgtccgc agaaggcagc aaggatttgc gtgtcaatca ggggttgtgg
     8461 taattcgcca aagacattga ggaacacttc cagatcttca ctgcctgcat ggagaaattt
     8521 tgtgatggac ggatcgcgca ggatcgattt cagcggtgac cagtcggtga tcccgagagg
     8581 atcaattagc gccagatgct cgccatcgaa aagttgaatc aaccccagtt gcgggtaata
     8641 agtgcgcgta cgaacaaatt cagtatccag ggctatcgcc ggaaaggcac ggacggcttc
     8701 acacaaagaa gccagcgcat cgtccgtggt aatcatttgg taattcaaat tgtattctct
     8761 ttagtgggcg tcaaaaaaaa cgccggatta accggcgtct gacgactgac ttaacgctca
     8821 ggctttattg tccactttgc cgcgcgcttc gtcacgtaat tctcgtcgca aaatttttcc
     8881 gacgttagat ttcggtaact catcacgaaa ctccaccagc ttcggtactt tgtagcccgt
     8941 gagctgacgg cggcaaaagg tcaccagtga ttcttcggta agcgatggat cttttttcac
     9001 tacgaagatt ttcaccgctt caccactgga gccggaaggt acgccaacag ccgcgacttc
     9061 ctgtacgcca ggatgctgca tgacgacatc ttcaatctcg ttgggataga cgttaaaacc
     9121 ggaaaccaga atcatgtctt ttttacgatc gacaatgcgc aggaaccctt cttcatccat
     9181 caccgcgatg tcgccggtgt gtaaccagcc atttttgatg atctcatctg taccatccgg
     9241 acgctgccag taacccagca tcacctgcgg tcctttgaca caaagctcac ccggttgacc
     9301 cggtggtact tcattatcat catcatccac cagtttggct tccgtcgacg gcaccggcaa
     9361 accgatgcta ccactatgat aatcaatatc atatgggtta acgctgacca gcggcgcaca
     9421 ctcggtaagg ccatagcctt ccagcagata ctgtcctgtc agtttcaccc aacgctctgc
     9481 caccacttgc tgcactggca tcccaccgcc tgcggaaaga tgcagactgg agaaatccag
     9541 ttgctgaaac tctttattgt tcagcaacgc attgaacaag gtgttaacgc cagtgatagc
     9601 ggtaaacgga tatttcgcta actcttttac caaccctgga atatcacgcg ggctagtgat
     9661 aagcaggttc tgcccaccca gttcgataaa cagcaggcag ttaatggtca gggcaaaaat
     9721 gtgatagagc ggcagtgccg ttactaccag ttctttacct ggatgcagca acggcccata
     9781 ggtggcattg acctgttcca agttcgccag catattgcgg tgagtcagca tcgcgccttt
     9841 cgccacacct gtggtgccgc cggtgtattg caggaaggct aaatcttccg gcaccagttc
     9901 gggtttgacg tactgcatcc ggtagccgtt gtacagggcg ctacgaaatg aaatggcatc
     9961 tggcagatgg tatttcggca ccaaacgctt gatgtattta acaacgaaat tgactaccgt
    10021 gccttttgcc gtagatagct gatcgcccat acgggtcaga attacgtgct gaacggcggt
    10081 tttatcaacc actttttcca gtgtgtgagc aaagttagac acgataacaa tcgccgatgc
    10141 gccgctatcg ttaagctgat gctcaagctc acgcggggta tacaacgggt taacgtttac
    10201 gacgatcatc ccggcacgca aaatgccaaa cagcgccacc ggatattgca ataagttagg
    10261 catcatcaac gcaacgcgat cgcctttctt cagccccaac ccttgttgca aataagcggc
    10321 aaacgcgcga ctgcgttctt ccagcttgcg gaaggtcatc acctccccca tattcacaaa
    10381 cgcaggctga tcggcgtagc gcgcgaccga ctgctcaaac atatctacca gagattgata
    10441 acggtcaggg ttgatctccg tcggaacgtc cgcgggataa cggttaagcc aaaccttctt
    10501 caattcttca cctctaaaat gcgtgttcgt cgtcatcgca accccaaatg ataaacatat
    10561 tgttaacata atattaactc atcttaccag cttgataatt acccaacgaa aaggttgcga
    10621 agcgcgtcac tatttatttt tatctttacc gtaagaatgc agaaacagcg gaccagccgc
    10681 tgtttctttt tctttaaaaa caagcaatta ttcagttaca actgtttgta ctctcgcggg
    10741 gccgggatta taccagcccc atccaccgta gccatagggc cagccacgac cgccataaaa
    10801 ccatggatca atcggctgag gcggcataat cacctgctgg gttaaatgcc aacgtttgta
    10861 acccgttact tgcatcacca taaatttata gggcgtgttg ccgatttttc cgtcaaccgt
    10921 accggtgatt ggcccgacaa ccgtcaccag ttgtccacgg aaatccaccg ggtccagaaa
    10981 accgttcaca tcggcataaa tgcgaccgcg agaaggttct cccagcgtcg gtctggctcc
    11041 gctgtccaac ggtacggtag caatttccag gcgggttttc ccttgctggt tttgtaccac
    11101 aaccactttg ccaccaaagc gtgcctcctg accaacgtac agctgcggcg cactcatcac
    11161 ccgaactaaa tcttgttgcg gcgtgggact gctgccttta atggcgtccg gcacagtgac
    11221 acaaccgctc agcattagcg caaacgtacc tgccagtatg cctttgataa cattctcttg
    11281 aaccgccatg atgcgactcc tttttttctc agggcatact cttaagattc attctttgcc
    11341 cggaagtttc ttccatgcga cgttgttacg taaataaacc ggttcggcat gttccaccgc
    11401 caccgtttta ccctcggcaa acatctgaca agcaatcggc agcatatctt ctgcagcggg
    11461 gagtaacact tcgccatcgc gcaaaaccag cccgctctct ttaccgagat ccggccaggc
    11521 ttgccagccc gtccctaccg ttacccattc gccggaaagc tgttgcattc gttcatgaac
    11581 gagttcgggt ttgagtacgg cttcggtttc ttcaccgtgc cagataccgt tttcatcacg
    11641 ctgatattcg acccagtaaa cttcgcccat tcgcgcgtca atggctgcca gcacgcgtgt
    11701 tgcgccgttt ttgcgccacg ctccttgcgc catcgtcatt agcgtggaga cgccaatcat
    11761 cggcagctct gcgccaagcg ccagcccctg cgcgatgcca ataccaatgc gcacgccagt
    11821 aaagctaccg gggccgcgcc cgtaagccag agcgtttatg tcagtcaggg aagttccgct
    11881 ggtggtcagg atatcctgca ccatcggtaa gattcgttga gtatgttcac gagggcaaag
    11941 ctcaaaatga gcgttgacag taccgtcgtt ccacagggcg acagagcagg cctctgtcgt
    12001 ggtatcgata gccagaattc gcatgggtct tcgtgcttag atcaataaaa aggcgcgcat
    12061 cataccatac tccgtaacaa attacctgga ggatggtatc gcaaggaaac gaaccgctcg
    12121 ggcaatgtca cgggtgcgtg gcgcgggcgg cagactggcg agaaacgtcg cgccgtaagg
    12181 gcgcattacc agccgattgt cgcaaatcac cagcacaccg cgatcgtcgg cgtcgcgaat
    12241 cagtcgccct accccctgct tgagagtaat gaccgcatcc ggcagctgca cttcatcgaa
    12301 cgggtcgcca ccgcgcaaac aacaatcttc catgcgcgct tttaacagtg gatcatccgg
    12361 cgaggtaaac ggcaatttgt cgataattac caatgacaat gtatcgccac gcacgtccac
    12421 cccctcccag aaactgctgg ttgccacaag aagcgcatta ccggcgctga caaattgctg
    12481 caacagttgc cctttgctgg tttccccctg caacaataca ggaagcgtca tggtagcgcg
    12541 gaactgctcg gccagatcgc gcatcatggc gtgcgaggta caaagcataa aacaacgacc
    12601 gttgttagct tcgatgatcg gtcgcagcat tgccgccagt tgccgtgcac aacccggttg
    12661 attggtttgc ggcaggttgc gcggcacaca gagtaacgcc tggcggctgt aatcaaacgg
    12721 gcttggcaat agcaacgact ccgcctgttc tatcccaagc cgcgaggtga aatgatgcag
    12781 atcgtcgttc accgacagcg ttgctgaggt gaagatccag ctaccgggtt tttgcgccat
    12841 taactctttg aatttatccg ccacgctgag cgacgtgaga gccagagtaa aatggcgcga
    12901 agtgcattcg taccagtagc tgtagcccgg ctgattgatc tcttttagcc gcttcagccg
    12961 tgtgcgatac aacgtggcgc gctcaaatgc cgcatccagc aaggcggaac gccccagtga
    13021 cagtttcgcc acgtcataac aaagttccag ggtgtcatcg agcagtaaaa atgcccgctg
    13081 aatttgcgga ttagctaaca gctcacgcag gttaccgcga taacctggct caccgagttg
    13141 cagacgaaaa tcctgcgcac tctgggcaag acgatcagcg cacttttgta actgctgggt
    13201 gtcttttaat tcggtgcggt aggcgatggt gatgtctttt gccaagtcga gcagttgtcg
    13261 actggagagt gactgaccaa aatactggct ggcaatgtcc ggtagctggt gggcttcgtc
    13321 gaagatcatg acgtccgctt ccgggatcaa ctcgccaaat ccactctctt taaccaccat
    13381 atccgccaga aagagatgat ggtttaccac caccacatcg gcgtccatcg cttttttacg
    13441 tgctttgacc acaaagcaat ctttatacat cgggcagtcg ctgccaagac agttgtcgtt
    13501 ggtgctggtg accagcggcc acgcctgtga atcttccgcc acgctgacgc aggtgctgat
    13561 atcaccatcg actgtttgat tagaccagga gcgcagcagg atcacatcgc ttaagatttg
    13621 taccggcaga tcgccccccg ccagcgcctg ctgttcgaga cgctcgaggc agaggtagtt
    13681 tgagcgccct ttcagcagcg ccacgttgcc cgtatatttc aatgcctttg agactgttgg
    13741 caaatcgcgg ctgtagagct gatcctgcaa cgcttttgag ccggtcgaga taatgacttt
    13801 ctttttcgcc cgcagcgcag gagccaggta agcgtaggtt ttgcccgtac cggttcctgc
    13861 ttccaccacc agcggctggc ctttttctat cgcctgggtg atggctaccg ccatctgtcg
    13921 ctgtggttct cgcggcttaa agcctggtat cgctttcgcc agctgaccgt ctggtgcaaa
    13981 atcgtccgtc acactacccc ctgttgattt aaacagggat tatgtcagga tgagggcgct
    14041 ttcgccagtt gaagtggtga cggcgacctc acattgtggc agtctttgca gcacgaaaat
    14101 ggaaggataa tgaggacaaa atgatgacta tcgttcgtat cgatgctgaa gcccgctggt
    14161 ctgatgtagt aatccacaac aacacgctct actacactgg tgtaccggaa aacctcgacg
    14221 ccgatgcctt tgagcaaacc gccaacacgc tggcgcagat tgacgccgtg ctgggaaaac
    14281 agggcagcaa taaatcgagc attctggatg ccaccatttt cctggccgat aaaaacgact
    14341 tcgcggcgat gaataaagcg tgggatgcct gggttgtcgc gggtcatgcg ccggtgcgct
    14401 gcacggtaca agcgggtttg atgaacccga agtataaagt tgaaattaag attgtggctg
    14461 cggtgtaagc tttatcgaag caaaataagt cagacgataa tttatcgata atactggtcg
    14521 gttttacata aatcgaccag agaataagat attactgttg atgcttctgc taattcatta
    14581 tttattttta taatttcaat tttatctata aaactaacta tataaataaa cataaccatg
    14641 ccgttgtgtt cgccctttga ttagcaactc tggttttctt tcttagctga acaatctggt
    14701 tatagcgtgc ggactgaccg ttaattttct ccatctgact ggataacaca ccatgagctg
    14761 ctacctttaa aacacctgaa tgtcaacagg ttaactcgtg ccatatcgtt ataatccctt
    14821 tgatattaga tgcaaattaa ggtcatatat agccttatcg ataacatggt taattttaag
    14881 gataagaata tgcctgctgt aatagataaa gccctggatt tcattggtgc catggatgta
    14941 tcagcgccaa caccaagttc gatgaatgaa agcacggcga agggaatctt taaatattta
    15001 aaagaactgg gagtacccgc gagtgccgct gatattacgg cgcgagctga ccaggaaggc
    15061 tggaaccctg ggttcacgga aaaaatggtt ggatgggcaa aaaaatggag actggtgaac
    15121 gctctgtgat taaaaatcct gaatactttt caacatatat gcaggaagaa ctaaaagcac
    15181 tggtctgagt taaatttata tcagcataaa tgggtcagga cgcttttaat cacatataaa
    15241 aagcgtcctt tttctcacaa tcaaataatc atcgacttct ataacgaaat cgatacggat
    15301 tagtgtgtta ctcgtcttca tcctcaaaac gcgccacgat tcgctcgccg gaatggttgg
    15361 cacgcagctc ttctgccacc agcgcgattg cctggccgct gctcatccct tgtgccatca
    15421 gctcctggat ccgctcgacg gctttttgct gctgttcatg ggtgagtgaa ggtaaacctg
    15481 caaacattgt taactcctgc taaattgttg gcgctaatta tttcatgcta cccggcacat
    15541 agccagtaga gtcaggactg atgaagacgt tatctcccgc tgtgattact ttaccctggc
    15601 gtcaggacgc cgctgaattt tatttctccc gcttaagcca cctgccgtgg gcgatgcttt
    15661 tacactccgg ctatgccgat catccgtata gccgctttga tattgtggtc gccgagccga
    15721 tttgcacttt aaccactttc ggtaaagaaa ccgttgttag tgaaagcgaa aaacgcacaa
    15781 cgaccactga tgacccgcta caggtgctcc agcaggtgct ggatcgcgca gacattcgcc
    15841 caacgcataa cgaagatttg ccatttcagg gcggcgcact ggggttgttt ggctacgatc
    15901 tgggccgccg ttttgagtca ctgccagaaa ttgcggaaca agatatcgtt ctgccggata
    15961 tggcagtggg tatctacgat tgggcgctca ttgtcgacca ccagcgtcat acagtttctt
    16021 tgctgagtca taatgatgtc aatgcccgtc gggcctggct ggaaagccag caattctcgc
    16081 cgcaggaaga tttcacgctc acttccgact ggcaatccaa tatgacccgc gagcagtacg
    16141 gcgaaaaatt tcgccaggta caggaatatc tgcacagcgg tgattgctat caggtgaatc
    16201 tcgcccagcg ttttcatgcg acctattctg gcgatgaatg gcaggcattc cttcagctta
    16261 atcaggccaa ccgcgcgcca tttagcgctt ttttacgtct tgaacagggt gcaattttaa
    16321 gcctttcgcc agagcggttt attctttgtg ataatagtga aatccagacc cgcccgatta
    16381 aaggcacgct accacgcctg cccgatcctc aggaagatag caaacaagca gaaaaactgg
    16441 cgaactcagc gaaagatcgt gccgaaaatc tgatgattgt cgatttaatg cgtaatgata
    16501 tcggtcgtgt tgccgtagca ggttcggtaa aagtaccaga gctgttcgtg gtggaaccct
    16561 tccctgccgt gcatcatctg gtcagcacca taacggcgca actaccagaa cagttacacg
    16621 ccagcgatct gctgcgcgca gcttttcctg gtggctcaat aaccggggct ccgaaagtac
    16681 gggctatgga aattatcgac gaactggaac cgcagcgacg caatgcctgg tgcggcagca
    16741 ttggctattt gagcttttgc ggcaacatgg ataccagcat tactatccgc acgctgactg
    16801 ccattaacgg acaaatatac tgctctgcgg gcggtggaat tgtcgccgat agccaggaag
    16861 aagcggaata tcaggaaact tttgataaag ttaataagat attacgccaa ctggagaagt
    16921 aagacgtgga ataccgtagc ctgacgcttg atgatttttt atcgcgcttt caacttttgc
    16981 gcccgcaaat taaccgggaa accctaaatc atcgtcaggc tgccgtgtta atccctatcg
    17041 tccgtcgacc gcaaccgggg ttgttgctga ctcagcgttc gattcatctg cgtaaacacg
    17101 ctggacaagt ggcattcccg ggaggcgcag tcgatgacac ggacgcaaca gttatcgccg
    17161 ccgcgctgcg cgaagctgaa gaagaggtcg ctataccgcc ttccgccgtt gaagttatcg
    17221 gcgtgctgcc gcccgtcgat agcgtcactg gctaccaggt aaccccagtg gtcggcatta
    17281 tcccgcccga tctgccgtat cgcgccagtg aagatgaagt ctccgctgtg tttgaaatgc
    17341 cgctcgccca ggcattacat ctgggtcgtt atcacccttt agatatctac cgccgtggcg
    17401 attcacatcg ggtatggcta tcctggtacg aacagtattt tgtatgggga atgaccgcag
    17461 gcataattcg tgagctggcg ctgcaaattg gtgtgaaacc ctgactatac ttatctttac
    17521 atctacaaaa cactacttga gacaatcatc gcaatattag ttaaatcgcg gtttttgatt
    17581 agtttaattc atgtgaatag ttaagccagt cgccgcgttc cctcttacac tatgcgctgt
    17641 tattagttcg ttactggaag tccagtcacc ttgtcaggag tattatcgtg attagtctat
    17701 tcgacatgtt taaggtgggg attggtccct catcttccca taccgtaggg cctatgaagg
    17761 caggtaaaca gttcgtcgat gatctggtcg aaaaaggctt actggatagc attactcgcg
    17821 ttgccgtgga cgtttatggt tcactgtcgc tgacgggtaa aggccaccac accgatatcg
    17881 ccattattat gggtcttgca ggtaacgaac ctgccaccgt ggatatcgac agtattcccg
    17941 gttttattcg cgacgtagaa gagcgcgaac gtctgctgct ggcacaggga cagcatgaag
    18001 tggatttccc gcgcgacaac gggatgcgtt ttcataacgg caacctgccg ctgcatgaaa
    18061 acggtatgca aatccacgcc tataacggcg atgaagtcgt ctacagcaaa acttattatt
    18121 ccatcggcgg cggttttatc gtcgatgaag aacactttgg tcaggatgct gccaacgaag
    18181 tgagcgtgcc gtatccgttc aaatctgcca ccgaactgct cgcgtactgt aatgaaaccg
    18241 gctattcgct gtctggtctc gctatgcaga acgaactggc gctgcacagc aagaaagaga
    18301 tcgacgagta tttcgcgcat gtctggcaaa ccatgcaggc atgtatcgat cgcgggatga
    18361 acaccgaagg tgtactgcca ggcccgctgc gcgtgccacg tcgtgcgtct gccctgcgcc
    18421 ggatgctggt ttccagcgat aaactgtcta acgatccgat gaatgtcatt gactgggtaa
    18481 acatgtttgc gctggcagtt aacgaagaaa acgccgccgg tggtcgtgtg gtaactgcgc
    18541 caaccaacgg tgcctgcggt atcgttccgg cagtgctggc ttactatgac cactttattg
    18601 aatcggtcag cccggacatc tatacccgct actttatggc agcgggcgcg attggtgcat
    18661 tgtataaaat gaacgcctct atttccggtg cggaagttgg ttgccagggc gaagtgggtg
    18721 ttgcctgttc aatggctgct gcgggtcttg cagaactgct gggcggtagc ccggaacagg
    18781 tttgtgtggc ggcggaaatt ggcatggagc acaaccttgg tttaacctgc gacccggttg
    18841 cagggcaggt tcaggtgccg tgcattgagc gaaatgccat tgcctcagtg aaagcgatca
    18901 atgctgcacg catggcctta cgccgcacca gtgcaccgcg cgtctcgctg gataaggtta
    18961 tcgaaacgat gtacgaaacc ggtaaggaca tgaacgccaa ataccgcgaa acctcacgcg
    19021 gtggtctggc aatcaaagtc cagtgtgact aatacttctt actcgcccat ctgcaacgga
    19081 tgggcgaatt tatccccgct ttctcgtctg ctgtaatatt ccccactaca cttccactgt
    19141 tgcgtcaggc gtttgtcgcc atacgcttac agggtggccc gcatgcaaaa agcacaacgg
    19201 atcattaaaa cctatcgccg taatcgaatg attgtttgta cgatttgcgc actcgttacg
    19261 ctcgcttcga ccctgagcgt gcgatttatt tcacagcgta acttaaatca acaacgggta
    19321 gtacaattcg ccaatcacgc tgtagaagaa ttagataaag tactgcttcc cctacaggca
    19381 ggtagcgaag tcttgcttcc gctgattggt ctgccctgct ctgtcgccca tttgccatta
    19441 cgtaaacagg cggcaaaact ccaaactgtg cgatccattg gcctggtgca agacggcaca
    19501 ctttattgct ccagcatttt tggttaccgc aatgtgcccg tcgtggacat tctggctgaa
    19561 cttcctgcac cgcaaccact tttacgcctg acgatcgacc gtgccctgat taaaggcagt
    19621 ccggttttga ttcaatggac gcctgcagcg ggcagtagca atgctggggt catggagatg
    19681 attaacatcg acttactgac ggcaatgctc cttgagccac aactgccgca aatcagtagc
    19741 gccagcctga cggtggacaa acggcatttg ctctatggta atgggctggt agattccctt
    19801 ccgcaacctg aagacaatga aaactatcag gtttcttcgc aacgctttcc ttttaccatt
    19861 aacgttaatg gtccgggggc tacggcgctg gcatggcact atcttccaac acaattaccg
    19921 ctggcggtgc tgctaagttt actggtgggc tacatcgcct ggctggcgac cgcttaccga
    19981 atgagctttt cccgcgaaat caatctgggc ctggcgcaac atgagttcga attgttctgt
    20041 cagcctttgc ttaatgcgcg cagccagcaa tgtattggtg tagagatttt gctgcgctgg
    20101 aacaatccgc gtcagggctg gatttcaccg gatgtgttta ttcctatcgc ggaagaacat
    20161 catttaattg tgccactgac ccgctatgtg atggcagaaa ccattcgtca gcgccatgtt
    20221 ttcccgatga gtagtcagtt tcatgttggc attaacgtcg cacccagcca ttttcgccgt
    20281 ggtgtgctga taaaagatct caatcagtac tggtttagcg ctcacccgat tcagcaactg
    20341 atcctcgaaa tcaccgaacg cgatgcctta ctggatgttg attatcggat tgcccgcgag
    20401 ctgcatcgta aaaacgtcaa actggcgatt gatgacttcg gcaccggcaa cagctcgttt
    20461 tcctggcttg aaacattacg tcctgacgtg ctgaaaattg ataagtcatt taccgcagct
    20521 ataggttctg acgcggttaa ctcgacggtg accgatatca tcatcgcgct ggggcaaaga
    20581 ctgaatattg aactggtggc ggagggcgtg gaaacgcaag aacaggcgaa gtatttgcgc
    20641 cgtcatggcg tgcatatttt gcaagggtat ttgtacgcac agccgatacc gctacgtgat
    20701 tttcccaaat ggctggcggg cagccaaccg ccgcccgccc ggcataatgg acatatcacg
    20761 cccattatgc cgttacgtta acgcttactc atcttcatcg tgcgccggtt gctctttaac
    20821 aatgcgaacc agatcaacac gataatcatt ggcttcaatg atggtgatat gcagtggccc
    20881 tacatcaatc acatcgccca cacggggaat gtgaccattt gccgagatca cgaggcccgc
    20941 gaccgtcgcg atatcatcgt catcggcaag gtgctcaaca tcaagcgcct gctgcaaggc
    21001 atgcaaatct gtaccgcctt ttaccagcca gccgtcacca tcagtaatga tttccggcgt
    21061 ttcgtcagcg tccgggaatt cacccgcaat ggcttccagc acatccagcg gcgtgaccag
    21121 accttgtacc acaccaaact cgttggtcac gataacaaag ctcccgcgag cacgacgcag
    21181 cacgcccagc aggttgatcg gatcgagggt ttcagggacg ataatcgccg gagacgccga
    21241 agcaatcgcc gccacatcaa cgccctcttc cagcgccacc agcagttctt tagcacgtac
    21301 gattccgatg atttcatcca gttcaccgcg acataccggg aacaggctgt gcggtgagga
    21361 gagcagctgc tcgcggattt catcgacccc gagattagcg tcaacccaac ttatttcacc
    21421 gcgcggcgtc atgatcccgc gcagagaacg cgacgccagc gtcagtacgc cgttaatcat
    21481 gtaacgttct tcttcggcaa atgcaccttc cgggatcggc atcgggttat cggcatcgtg
    21541 ctgaacattg gcctgacgtt tcccgcccat caaacgcagg atggcatcgg cagtacgcgc
    21601 tcgcagcggc aaagtcgact ggtgacgaat aaagttgcga cgcgcaatct ggttaaacac
    21661 ttcgataatg atcgagaagc caatcgcggc atacaggtaa cctttcggaa tgtggaaacc
    21721 gaaaccttct gccaccagac tcagaccaat cattaacagg aagctcagac agagcaccac
    21781 caccgtgggg tgctggttaa cgaatcgcgt cagcggtttc gatgccagca acataaccgc
    21841 catcgcaatc actaccgccg ccatcatcac cggcagatgg ttaaccatcc ctactgcagt
    21901 aattaccgca tccaacgaga agacggcgtc aaggatgaca atctgtgtga cgaccaccca
    21961 gaaactggcg tagcctttac cgtggccgga atcatgatcg cggttttcca gccgttcatg
    22021 cagttcggtt gttgctttga acagcaagaa tatccccccg aacaacataa tcaggtcgcg
    22081 tccggagaag gagaaatcca taacggtaaa tagcggtttg gtcagcgtga ccatccatga
    22141 aatcagcgac agcagcccca gacgcataat cagcgccagt gataatccca gcaaacgcgc
    22201 tttatcgcgt tgttttggcg gcagtttgtc agcaagaatg gcgatgaaga ccaagttatc
    22261 gatacccagc acaatttcga gaacaacaag cgtgagtagc cccgcccaaa ttgaggggtc
    22321 cattaagaat tccatgacaa gctcctgctt aaggaatagc tatttgacgc cagaaataat
    22381 gcaggcgtaa cgacaaaatg caaacgaaag gtgcggctta gagtgccaga aaggcaggcg
    22441 ttaaaaggcc tgatactgaa atgacgtcgg tgacgatcca tactgcgggc tactgcccta
    22501 tactccatgg ttgttaaacg ggagttaaac atatcagaga cacctctgat ttggcaaaga
    22561 tttaccttcc tttgcaaacg aatgtgacaa ggatatttta cctttcgaaa tttctgctaa
    22621 tcgaaagtta aattacggat cttcatcaca taaaataatt ttttcgatat ctaaaataaa
    22681 tcgcgaaacg caggggtttt tggttgtagc ccttatctga atcgattcga ttgtggacga
    22741 cgattcaaaa atacatctgg cacgttgagg tgttaacgat aataaaggag gtagcaagtg
    22801 accattgcta ttgttatagg cacacatggt tgggctgcag agcagttgct taaaacggca
    22861 gaaatgctgt taggcgagca ggaaaacgtc ggctggatcg atttcgttcc aggtgaaaat
    22921 gccgaaacgc tgattgaaaa gtacaacgct cagttggcaa aactcgacac cactaaaggc
    22981 gtgctgtttc tcgttgatac atggggaggc agcccgttca atgctgccag ccgcattgtc
    23041 gtcgacaaag agcattatga agtcattgca ggcgttaaca ttccaatgct cgtggaaacg
    23101 ttaatagccc gtgatgatga cccaagcttt gatgaactgg ttgcgctggc agtagaaaca
    23161 ggccgtgaag gcgtgaaagc actgaaagcc aaaccggttg aaaaagccgc gccagcaccc
    23221 gctgccgcag caccaaaagc ggctccaact ccggcaaaac caatggggcc aaacgactac
    23281 atggttattg gccttgcgcg tatcgacgac cgtctgattc acggtcaggt cgccacccgc
    23341 tggaccaaag aaaccaatgt ctcccgtatt attgttgtta gtgatgaagt ggctgcggat
    23401 accgttcgta agacactgct cacccaggtt gcacctccgg gcgtaacagc acacgtagtt
    23461 gatgttgcca aaatgattcg cgtctacaac aacccgaaat atgctggcga acgtgtaatg
    23521 ctgttattta ccaacccaac agatgtagag cgtctcgttg aaggcggcgt gaaaatcacc
    23581 tctgttaacg tcggtggtat ggcattccgt cagggtaaaa cccaggtgaa taacgcggtt
    23641 tcggttgatg aaaaagatat cgaggcgttc aaaaaactga atgcacgcgg tattgagctg
    23701 gaagtccgta aggtttccac cgatccgaaa ctgaaaatga tggatctgat cagcaaaatc
    23761 gataagtaac gtattgtgtt gattatcact cagttttcac actttagtct tacgtaaaca
    23821 ggagaagtac aatggagatt accactcttc aaattgtgct ggtatttatc gtagcctgta
    23881 tcgcaggtat gggatcaatc ctcgatgaat ttcagtttca ccgtccgcta atcgcgtgta
    23941 ccctggtggg tatcgttctt ggggatatga aaaccggtat tattatcggt ggtacgctgg
    24001 aaatgatcgc gctgggctgg atgaacatcg gtgctgcagt tgcgcctgat gccgctctgg
    24061 catctatcat ttctaccatt ctggttatcg caggtcatca gagcattggt gcaggtatcg
    24121 cactggcaat ccctctggcc gctgcgggcc aggtactgac catcatcgtt cgtacaatta
    24181 ccgttgcttt ccagcacgct gcggataagg ctgctgataa cggcaacctg acagcgattt
    24241 cctggatcca cgtttcttct ctgttcctgc aagcaatgcg tgtggctatt ccggccgtca
    24301 tcgttgcgct gtctgttggt accagcgaag tacagaacat gctgaatgcg attccggaag
    24361 tggtgaccaa tggtctgaat atcgccgggg gcatgatcgt ggtggttggt tatgcgatga
    24421 ttatcaacat gatgcgtgct ggctacctga tgccgttctt ctacctcggc ttcgtaaccg
    24481 cagcattcac caactttaac ctggttgctc tgggtgtgat cggtactgtt atggcagtgc
    24541 tctacatcca acttagcccg aaatacaacc gcgtagccgg tgcgcctgct caggctgctg
    24601 gtaacaacga tctcgataac gaactggact aacaggtgag cgaaatggtt gatacaactc
    24661 aaactaccac cgagaaaaaa ctcactcaaa gtgatattcg tggcgtcttc ctgcgttcta
    24721 acctcttcca gggttcatgg aacttcgaac gtatgcaggc actgggtttc tgcttctcta
    24781 tggtaccggc aattcgtcgc ctctaccctg agaacaatga agctcgtaaa caagctattc
    24841 gccgtcacct ggagttcttt aacacccagc cgttcgtggc tgcgccgatt ctcggcgtaa
    24901 ccctggcgct ggaagaacag cgtgctaatg gcgcagagat cgatgacggt gctatcaacg
    24961 gtatcaaagt cggtttgatg gggccgctgg ctggtgtagg cgacccgatc ttctggggaa
    25021 ccgtacgtcc ggtatttgca gcactgggtg ccggtatcgc gatgagcggc agcctgttag
    25081 gtccgctgct gttcttcatc ctgtttaacc tggtgcgtct ggcaacccgt tactacggcg
    25141 tagcgtatgg ttactccaaa ggtatcgata tcgttaaaga tatgggtggt ggcttcctgc
    25201 aaaaactgac ggaaggggcg tctatcctcg gcctgtttgt catgggggca ttggttaaca
    25261 agtggacaca tgtcaacatc ccgctggtgg tttcgaccat caccgggcag gatggacaga
    25321 cccgtgtcac caccgtgcaa actattcttg accagttaat gccaggcctt gtaccactgc
    25381 tgctgacctt tgcttgtatg tggctgctgc gcaaaaaagt taatccgctg tggatcatcg
    25441 ttggcttctt cgtcatcggt atcgctggtt acgcttgcgg cctgctggga ctgtaagact
    25501 gttgtacact accggggcct tttggccccg ttttttatct ggaggattaa tgacaatcac
    25561 ggacctggta ctgattcttt tcatcgccgc actcctggcc ttcgcgatct acgatcagtt
    25621 catcatgccc cgccgtaacg gccccaccct gctggcaatt cctttgctcc agcgtggtcg
    25681 catcgatagc gttatcttcg tcggattgat tgtcattctt atctataaca acgtcacgaa
    25741 tcatggcgcg ctaataacaa catggttatt aagcgcactg gctctgatgg gtttttatat
    25801 attctggatc cgcgttccga agatcatctt taaacaaaaa ggttttttct tcgccaatgt
    25861 ctggattgaa tatagccgaa tcaaagcgat gaacttgtcg gaagatggcg tgttggtgat
    25921 gcaattagaa cagcgtcggc tgttaatccg cgttcgaaat atcgacgatc tggaaaaaat
    25981 ttataagctt ctcgtatcaa ctcaataaat tatgaattta gccaaagcta tgcttagtgt
    26041 atttttaata atcagacata gcttaggcta tattacctct tcccttattt gttatttatt
    26101 ttaacgtttc attgatatat aaatctaaat gaaaatcgtt atcaacaaag caatgaaata
    26161 atatattcca acagttgttt tatattctca aaatatgtta aggttgcgcc ctcatttggg
    26221 gagtagccga tttccagatt ccggaaatgt acgtgtcaac atactcgttg caaaacgtgg
    26281 cacgtacgga ctgaatactt tcagtcaggc gagaccatat gcacatcaat cgctatgcct
    26341 gcatgaacgc ggaaaccatc gcggcttgtt gttcatgtat gcatgtttgc tgggggcgat
    26401 gatgtgtttt atggataccc cggtcaggac gttgtcatga atatcactgc tactgttctt
    26461 cttgcgtttg gtatgtcgat ggatgcattt gctgcatcaa tcggtaaagg tgccaccctc
    26521 cataaaccga aattttctga agcattgcga accggcctta tttttggtgc cgtcgaaacc
    26581 ctgacgccgc tgatcggctg gggaatgggc atgttagcca gccggtttgt ccttgaatgg
    26641 aatcactgga ttgcgtttgt gctgctgata ttcctcggcg ggcgaatgat tattgagggt
    26701 tttcgtggcg cagatgatga agatgaagag ccgcgccgtc gacacggttt ctggctactg
    26761 gtaaccaccg caattgccac cagcctagat gccatggctg tgggtgttgg tcttgctttc
    26821 ctgcaggtca acattatcgc gaccgcattg gccattggtt gtgcaacctt gattatgtcg
    26881 acattaggga tgatggttgg tcgctttatc ggctcaatta ttgggaaaaa agcggaaatt
    26941 ctcggcgggc tggtactgat cggcatcggc gtccagatcc tctggacgca cttccacggt
    27001 taataagaac gctgccagag gtgaatatta aagtccgtct ggcagtcgaa cacttctttt
    27061 gctgccagtg tttgccagac ttctggcttt gcacgccagg caaacggcgt catctgcaat
    27121 aatgcgacgg cttcatcacc gcgaagacgc atcggataac acaactccgc actctgctgt
    27181 aatgtaaaac cttccagttg ttctgcatga ggtgcatgaa gatgtacttc attgtaaatc
    27241 agccccttca gctccatcaa atgtcgcggt cccggcgtgg cagtaatgac ccaaccgccg
    27301 ggcttcacta ctcgtgctaa ttcttctgct ttacacagcg cgtaaatacg tattatggcg
    27361 tccatactgg tatcggaaaa cggcaaacgg tggctggaag cgacacaaaa agtgacctgc
    27421 ggatagcgtt tcgccgccgc ttttatcgct accttcgaaa catccagacc aaacgtggtg
    27481 atttcgggca acgcatcggc aaatgcgtgt gtgtaatacc cttcaccaca gccaatatcc
    27541 agcaccgccg tggccttatc atcaagccgt tcccgcagtt gggcgacaat tgcatcacgc
    27601 agcggctgat aatgtccggc atctaagaat gcgcggcgtg cttgcatcat ttccgcgctg
    27661 tcgcccggat cacgagaccg tttatgctga acgggcagca gattgacata cccttctttc
    27721 gccatatcaa actgatgtcg ctggggacag atatagctgt ttttttcacg cgaaagaggc
    27781 tgatggcaaa gtggacagga aaacgacatg acaactccgg caggatacta aaggccgcaa
    27841 gtgtaacgcg aatcacgcgg cgggcaaata tccgaacgcc aggagcgaag ataaagcata
    27901 gtaaaaagcc tcgcattcga cgaggcttta tagcgagatt gaagcgtatt cacacttcag
    27961 atcagtggat tcgatcagat agctgttacg ttaacagctg ccggaccttt ctggccgtcc
    28021 tgaatttcga actcaacgtt ctgaccttca gccagagttt tgaagccatt accctggata
    28081 gcggagaagt gtacgaacac gtctttgctg ccatcagccg gagtaatgaa gccaaaacct
    28141 ttagactcgt tgaaccactt aacctgacct ttaatctttg ccatttgaaa aattccttag
    28201 attgttttct tcgcccgcag gcataacata gataaaactg acacattact gcatgaggca
    28261 ccaatataag gctcggcaga gaagcggtat tcaacgtcaa cgtgtttact caggacttct
    28321 ttactgaaaa tgccacacat aaacagaact gtacctcgtt taacccgaaa tctgttatca
    28381 catacaacgt taattatggc aagccatttt taaacatgtc tcgatcagac gcacaaatct
    28441 cgatacgtct tccacttttt ttgcacactt atgcaacgga atacgcgccg atatatcatt
    28501 gtgcttaacc ttgccagttc aggcagatac ttaaactggc gtattttcta acatagttca
    28561 ataagttcag ttgttccagg ccagtgggag aagttattac atagtgcgtg caatatcaca
    28621 ttttttgcta tgcaatgaat aaaaagttat atcacttttt ctcataaaac agtcagttaa
    28681 cggctatcaa tcaccctaaa gagaagccaa tccccaaatg gattgtaaat ttaaaataag
    28741 aaaaattgat gaatgagcaa aaaaatcaag agagaaacgt ttcgctaata aataatacca
    28801 cgcttaatca caaatccgat gtaaacatcc taataaatta atgaggaaaa tatctttttc
    28861 tgatatcccg ttacgcaaat aaataatatg ataattattt gaagtcagac cagagtttta
    28921 atttgaagca gttgcaccat gacagtgcgt ataatcagga tgaattgagt aacccttcaa
    28981 cgacggggtt actcaagatt gaggaaggat tatcgttcgg cgaccagacg aataatatct
    29041 tcgtcttcat ccgatttttg actctcaacg gtctttttat ctgctttctc tggttcgttt
    29101 gcttcgcaca aacgacgtaa cagtgcattt tgacgttttt gctgatccag caacgcctca
    29161 agcagttcaa tctgttcgtt agtccgtgaa ctggcacgat tgataaaaaa ccacaagatg
    29221 agcccgataa gaagaaccac caccgataca accaaagacg caatgttcat cacgcctgaa
    29281 tttacaactt cgttcatttc accacctctg agtagaggcg ctattctacc actgctggag
    29341 aggaaggaaa tctagtgctg aaaaaatgat atcaccacgg gataaactgg ttaatggcac
    29401 aaattccgct gaaaaattgt acatcctgat cgcacatcat gttgaatacc tgcgcccaaa
    29461 gcagcaagca agccaacacc acgacaacca gaacgaccca tcgaaacttt ttcactccaa
    29521 tctccgtttc acctacctta tgtcattaaa ctagcatgcg ttagttaaac agcgcctaac
    29581 tatgtcgata ttcgtgcttt ttcggaatga gtagcttgct tcagcgcata ttgccgctac
    29641 gattaagcga acataaaaag agaagaggtt gtaatgcgat ttatcattcg cacagttatg
    29701 ctgatagcac tggtatggat aggattatta ctcagcggat atggcgtttt gattggaagc
    29761 aaagagaatg ccacaggatt aggtttgcaa tgtacctatc tgactgccag aggcaccagc
    29821 acggtacaat acttgcacac taaaagtggt tttttgggga taacagattg cccgctgtta
    29881 cgcaaaagca atatcgtggt cgataatggt taagggcaat aaataaccag attctcactc
    29941 ctgagtaaaa tactcttata gcaagcgcgt ttaatataac gccaccttca actttatttt
    30001 tctcatgcta aataaagaac ctgtctgttt gatattccga caggttctta ctctcatcag
    30061 aacggatagt cgtgataacc catttgggca gaaattttgc gcgctgcggt atgcaacatt
    30121 gcgacatatt cctgtaaacg ctcttcagag aaacgcaacg tcgggaagga gatgctcaaa
    30181 ccggcaatga ccacgccaaa gcgatcaaat accggtaccg caatgcatcg cagcccttct
    30241 tcctgctctt cgttatcttc gccatacccc tgctcgcgca cctggtccag aacgggtaat
    30301 aacgcttctg tactggtgat ggtccgctcg gtactgcgtt tatactccac gccctcaaga
    30361 atttgcttca cttcatcgcg atcacgccat gccagcagca ccttaccaat cgcggtgctg
    30421 tacagtggat tacgacgccc aatccgtgaa tacatgcgca aattgtacat agagtcaatt
    30481 ttgtggatgt aaacaatact gtcttcgtcc agtgcgccga ggtggatagt ttctttggtc
    30541 aggcgggaga tctcacgcat ctggatatct gcgctacgaa ttaaatcgac gttttgtaac
    30601 gcgcgagcgc ccagttcaaa caatttcagg gtcagggaat atttctccga ctccccttcc
    30661 tgcgccacat aacctaaggt tttcatggtc tgtaaaaagc gataaacggt gctttttgac
    30721 atcatgacgc gctgcgacag ctcggttatc cctatttcgc gctcttcacc cagcgcctgc
    30781 aaaatgccaa aaacttttag cacggaagat acagaatcag gctgtttatc cagatctgcg
    30841 ttagccattt atcacctcat tgcgagtgtt ttataaaaat cagaactgtt ttttattata
    30901 atttcgcacc agggtggtcg caatccatct tttgccggtt agttacaatt ctgcgacatc
    30961 caccgtgaat atcagtgcta gaatcatacc cctgttgatt attcaccaaa gatttaaaat
    31021 tcctatgcca aaagttcagg ccgacggcct gccattgccc cagcgatacg gtgcgatatt
    31081 aaccattgtg attggtattt cgatggctgt ccttgacggc gcaatcgcca acatcgccct
    31141 gccaacaatc gccacggacc ttcatgccac gccagccagt tccatctggg tagtgaacgc
    31201 ctatcaaatc gccattgtca tctccctgct ctcgttttcg tttctgggcg atatgtttgg
    31261 ctatcgacgt atttataaat gcggtctggt cgtttttctg ttgtcttcac tgttctgtgc
    31321 cctttctgat tcgctgcaaa tgctcaccct tgcgcgtgtc atacaaggtt tcggcggtgc
    31381 agcgttgatg agcgttaata ccgcacttat ccgcctgatc tatccacaac gttttctggg
    31441 tagagggatg ggcataaact cgtttattgt tgccgtctct tctgctgccg gaccgacaat
    31501 tgctgcagca atcctctcca tcgcatcctg gaaatggtta tttttaatca acgtaccgtt
    31561 aggtattatc gccctgcttc tggcgatgcg ttttctgcca cccaatggtt ctcgcgccag
    31621 taaaccccgt ttcgacctgc ccagcgccgt gatgaacgcg ttaaccttcg gcctgcttat
    31681 cactgcgctg agtggtttcg ctcaggggca atcgctgacg ttaattgctg cggaactggt
    31741 ggtaatggtt gttgttggta ttttctttat tcgccgccag ctttctcttc cagtaccgct
    31801 cctaccggtg gatttactgc gtatcccgct gttttcactt tctatttgca catctgtttg
    31861 ctctttctgc gcacaaatgc tggcaatggt ttccctgccc ttttacctgc aaaccgtgct
    31921 cgggcgtagt gaagtcgaaa caggcttact tctgacaccg tggccgttag caacgatggt
    31981 gatggctccg ctggcaggct atttgattga acgcgtacat gcaggattgc tgggggcttt
    32041 agggttgttc atcatggctg cggggctttt ttccctggtt ctgctgcccg cgtcacctgc
    32101 ggatatcaat attatctggc cgatgatctt atgtggcgct ggatttggct tgttccagtc
    32161 acccaataac cacaccatta ttacctccgc tcctcgcgaa cgtagcggtg gagccagtgg
    32221 catgttagga acggctcgtc tactgggtca gagtagcggc gcggcactgg tggcgctgat
    32281 gctaaatcag ttcggtgata atggtacgca cgtttcgctg atggctgcgg ctattctggc
    32341 agtgattgct gcctgtgtga gtggtttacg tatcactcag ccacgatcca gggcataaaa
    32401 aaagcgcgtc gatcaggacg cgctttttag tatttacttc atattacttc aggtattcac
    32461 ccgtacgcag agcttcaatt cgtttatcca gcggcgggtg agtcatgaac aactcactga
    32521 gcgatttcga cttaccgtta atgcagaaag ccatcatgct ggttgcttct tgcggttcgt
    32581 agctggtttt caggcgctgc agcgcggcaa tcattttctc gcgaccaacc agttttgccg
    32641 aaccggcatc agcatagaat tcacgatgac gcgagaacca catggtgata atgctcgcca
    32701 gaataccaaa caccagttcc agaaccgttg caaccgcaaa atagatcagc gggttgccgt
    32761 tgctctcttc accttcatca cgatttccgc ccataaaacc cgcggcaagc tgcgccagga
    32821 tacgggaaat aaagataacg aaggtgttca ccacgccctg aatcagcgtc atggtgacca
    32881 tatcaccatt ggcgatgtgg ctgatttcgt gagcaattac cgcctcggct tcatccgggc
    32941 tcatgttctg cagcaaaccg gtgctgacag caaccagaga ggcatcacgg cgcgcaccgg
    33001 ttgcaaaagc gttgatgtcc ggcgcatggt agatagccac ttgcggcata gcgatccctg
    33061 cctgacgagc ctgggttgct acagtattga ccagccaacg ttccctttcg ttacgcggtt
    33121 gctcgatcac ttccccgcca acagatcgta atgccatcca tttggacatc agaagcgaaa
    33181 cgaaggaacc accaaaaccg aacagcaagg ccatgatcat cagcccctga acgctgctcg
    33241 actgtatccc tgtcaggctc agtaccagcc cgaaaacgac cattacggcc aggttcgtta
    33301 gcaggaagag cgcgattcgc atcataattt tctttttacc tcagtttaac aaaacgcaat
    33361 atgcgatacc cacatcgtat gggttacgcg actattttca agtctggata gtgcgtaagt
    33421 caccagaaag acacaacttt acattttgta gcatctgatt tacggcatct tgccgctgtt
    33481 aaaaaatcag gcacaatttc ttgtgcctga ttgatattac ttgacgggag cgggttgttc
    33541 cgcgggtctg gctttttcaa gcttcgccag atcgagtgcg atattcaccg tctcatccag
    33601 ataaggatcc ggctcctggt aatctttcgg tagatcatcc agcttcttca actccggttt
    33661 accttcgcgt ttaaagcgtt cgttcaaacg cgccagacgc gtcgcatcat cttcattatt
    33721 ctctttctca cgcacagcgt agttcagaga aacgatattg cgcttgtcct tcatagcgtt
    33781 gaagcgcgcg atatccttca tgatgttctg gaactcagga tctttcgcga tacgcgcatt
    33841 atgttccttc agcagctccg gttcaaaggc agttaaatct cctgatttca cataagtcgc
    33901 ggcatcgatg ctatcccacg gcagcgcgtt atcttcgaat ttctcacccg tttccgtttc
    33961 ttcattaccc gtcggcatga tgatgtctgg cgttacgcct ttacgttgcg tactgccgcc
    34021 gttaacgcga tagaatttct ggatcgtgta ctgcacagaa cccagcgctg gccattcagg
    34081 acgtaacatc tgatcgtaaa tacggttcaa tgaacggtat tgctgaacgg tgcctttacc
    34141 aaacgtcggt tcacccacaa ccagcgcacg accgtaatcc tgcattgccg cggcaaagat
    34201 ttctgaagcc gaagcactga aacggtcaac cagtaccacc agcgggcctt tatagaacac
    34261 ctgcccgtcg gtatcgctgt cttcacgaac cttgccgttg ttatcgcgga cctgaacaat
    34321 gggacccgca ggaataaaca gacctgagag cgataccgct tcggtcaacg ccccaccgcc
    34381 attgctacgc aggtcgatga tcacactgct gacattctgt ttttccagtt tctgcagttg
    34441 aactttgaca tcgtctgtca aacccacata gaagcccgga atatccagca cgccgacttt
    34501 ctctttaccg acggtcttca ccgacatttt aaccgcgcgg tcttcgagac gaatacgttc
    34561 acgggtcaac gttacagtac gggtcttggt ccctttacca gcaggtaaaa tttccagacg
    34621 aactttactg cccttcggcc ctttaattaa ggcaaccaca tcatcaagac gccagccaat
    34681 cacgtcaacc atcggcttgc ctgtttgacc aacaccgaca attttgtcac caacgctgat
    34741 agctttactc ttcgctgccg gaccacctgc caccatcgaa ttgataacgg tgtagtcatc
    34801 atccatttgc agcactgcgc caataccttc cagtgacaaa ctcatttcag tgttgaactg
    34861 ttcggtatta cgcggggaaa gatagttggt atgcggatcg atttcacgcg caaacgccgt
    34921 cattgccagc gagaaaacat cttcgctgtt ggtttgcgcc agacgacgaa tggcaaattt
    34981 gtagcgccgt gtcagggttt cacgaatttc tttatccgtt tttcctgtca gcttcaggct
    35041 taactcgtcg aatttgactt tactgtccca cagcgcgttc aactcagcct cgtttttcgg
    35101 ccaaggcgct ttgctgcggt caaggttata agtgtcgttg ccggtgaaat ccatcggctt
    35161 ttccagtacc gacaaagcgt actggtaacg ttcaaaacgg cgcttttgcg ccagattgta
    35221 gagatcgtag aaaacgtcga gtttgcctga acgcagttca tcgcctaact cggttttctt
    35281 tttcgcgaac tgttcaacat cgcttgccag cagcacattg tggctgtaat cgagcagatt
    35341 caggtagcgg tcaaagattt tggccgaaaa tgcctgatcg aggtcgaact ggcgataatg
    35401 agaacgggtg aagcgcgacg ttacgcgctc acttaccgtc gcatgctgcg tctcttcctt
    35461 taataccgga atttgatcag cacgcgtgat atcttctaca gcgaaggtct ggcctgctat
    35521 tgcaagcagg ccagctaacg cggtaagcct aaaaaacatg ttcatgcctg gcccggcctc
    35581 cgtttcagaa caccaggtgt tctgcgcgca caatcaaaga catacccgaa ttcagctgga
    35641 cgcggacgcc gtctttggtg atttctaata cggtggcatc catcgcgttt tgacccgctt
    35701 tcaccttcag ggcttgtccg acagtcagag ctgaaatgtc agaaaccggg gtgtgctgtt
    35761 cttcgcgagg tgcttttact gtttttggcg ctttctctac cggcttttgc gcacgaggtt
    35821 tacgttcagc gccttctttg cggcgtggcg tggtcggacg tggcttgcgt tcgcggcgcg
    35881 gtgcgtcttc tttctcacca gcagctgcgg cagcttcgcg ttttttcgct tgctgttcag
    35941 cacgctgtgc ctgaacacgc gctttcgctt cttcaagctg cttgcgagca tgctctacat
    36001 gttgctcgtc cagctcaccg catgggttgc cgtcaagatc gacacgcgtt gcgccgggtt
    36061 taacaccgta aagataacgc cagctcgaag tgtagagacg taaagcggat cgtaattgcg
    36121 ttttgctcag gttcatttcc ccggcaacac gatcgaccaa atcctgaaaa ataccaattt
    36181 tcagcggacg cgcttcacct tccgcactga aacagtgggg aaaacgttcg gccagaaacg
    36241 cgattacttc tttactgcta ttcaacttag gttgattttc catgaaattt cctgattaca
    36301 acggacgtag ccaacaagcg caggcatgaa caggcgtcat tataatgacg ctaccagtaa
    36361 atgctacgtt atccgttgat tatcctgcga cgctcgcaaa gaattttttg taatccgtcg
    36421 ttgcaagcac tttttcaagc tgtgccacaa gctgacgtaa gccttgctcg tcctcgtctg
    36481 taaagcgacc gaagacggta ctatcgatgt cgagaacacc aataatctga tttttcacca
    36541 ccagcggcag aacaatttca gaattactcg ccgcatcaca ggcaatatgc ccgtcaaacg
    36601 cgtgaacatc ctcgatacgc tgcacttgat tgcgggcaac cgctgtgccg cacaccccgc
    36661 gcccgacggg tatccggaca caggcaattt tgccctgaaa tggtccgagt accagtgtat
    36721 cgtcctcaag caaataaaaa cctgcccagt taacgtcagt gagacgctcg tataacaacg
    36781 cactggtgtt cgcaagcgtt gccagaaaac tggtttctcc cgccatcagc gcgttaaagt
    36841 cgcgatttaa atccgcgtaa aattctgttt tgttcattat ttaatcactt ggttgtctta
    36901 cctggaactg ccagcctatt aaaataagca ttaaatgcgt taatgctcaa gatcattccc
    36961 atcatgggtt aagattaatg ttaattctta ttacatttgg cacgtcatgg ctcttaacac
    37021 accacaaatt acgccgacaa aaaagataac agtgagggca atcggcgagg aactgccgcg
    37081 tggtgattac caacgttgcc cgcaatgtga catgctgttt agcctgcccg agataaattc
    37141 tcatcaaagt gcctattgtc cgcgctgtca ggcaaaaatt cgcgacgggc gcgactggtc
    37201 gctaacgcgc ctggcggcaa tggccttcac catgctgttg cttatgccgt ttgcctgggg
    37261 cgaaccgctg ttgcatatct ggctgttagg cattcgtatt gacgccaacg tcatgcaagg
    37321 catctggcaa atgaccaaac agggcgatgc gataacggga tcaatggtct ttttctgcgt
    37381 tattggtgcc cccctcattc tggtgtcctc catagcatat ttatggtttg gtaaccgact
    37441 gggaatgaat ttacgtccgg tactgctgat gcttgagcga cttaaagagt gggtaatgct
    37501 ggatatctac ctggtcggca ttggcgttgc ttctataaag gtacaggatt atgcccatat
    37561 ccaggcgggt gtcggcttgt tctcttttgt ggcgttggtg attttaacga cggtgacgtt
    37621 gtcacatctt aatgttgagg agctgtggga gcgatattat ccgcagcgcc ccgctacgcg
    37681 taggaacgag aaacttcgtg tctgtcttgg gtgccatttt accggctatc ctgatcagcg
    37741 tggtcgctgc ccgcgttgcc atatcccgct acgcctgcgt cgtcgtcata gtttgcaaaa
    37801 atgctgggcg gcgctgttag cgtcaatcgt tttgttgtta ccagccaacc tattgcctat
    37861 ttctatcatt tatctgaatg gtggccggca ggaagatacg attctttccg gaattatgtc
    37921 gctggcaagt agcaacattg cggttgcggg aatcgtgttt atcgccagta ttctggtacc
    37981 gtttactaaa gtgatcgtca tgttcacttt actgttgagc attcatttta aatgccagca
    38041 aggtttacgc acacgcattc tgttactgcg gatggtgacc tggattggac gctggtcgat
    38101 gctcgacctg tttgtcatat ctttaaccat gtcgctgatt aatcgcgatc agatcctcgc
    38161 ttttactatg ggaccggctg cgttttattt tggcgcagcc gtaattttga ctattcttgc
    38221 tgtggaatgg ctggacagcc gcttactttg ggatgcacat gagtcaggaa acgcccgctt
    38281 cgacgactga agcgcagatt aaaaataaac gccgtatctc acctttctgg ctgctgcctt
    38341 tcatcgcgct aatgattgcc ggttggctga tttgggacag ttatcaggac cggggtaata
    38401 ccgtcaccat cgactttatg tcggcggatg gtattgttcc gggccgtacg cctgttcgtt
    38461 atcagggcgt tgaagtcgga acagtgcagg atatcagcct cagcgacgat cttcgtaaga
    38521 ttgaagtcaa ggtcagcatc aagtccgata tgaaagatgc gctgcgcgaa gagactcagt
    38581 tctggctggt gacgccaaaa gcatcgttgg caggtgtctc cgggctggac gccctcgtcg
    38641 gtgggaacta tatcggcatg atgccgggta aaggtaaaga gcaggatcac tttgtcgcgc
    38701 tcgataccca accgaaatat cggctggaca atggcgatct gatgatccac ctgcaagccc
    38761 ccgatctcgg ttcgctgaac agcggttcat tggtctattt ccgcaagatc ccggtgggaa
    38821 aagtctacga ctatgccatc aatcccaaca agcaaggcgt ggtgattgat gtcctgatcg
    38881 agcggcgttt taccgatctg gtgaaaaaag gtagccgttt ctggaacgtt tccggcgttg
    38941 atgccaacgt cagtatcagt ggcgcaaagg tgaaactgga aagcctggcg gcactggtta
    39001 acggtgcgat tgccttcgat tcaccagaag agtcgaaacc tgccgaggcg gaagatacct
    39061 ttggtctgta tgaagatctg gcccacagcc agcgtggcgt aataataaaa ctggaactgc
    39121 cgagtggagc aggattaacc gccgactcga cgccgttaat gtatcagggg ctggaagtcg
    39181 gacagctgac taaactggat ttaaatcctg gtggtaaagt cactggggaa atgaccgttg
    39241 atcccagcgt cgttaccctg cttcgtgaaa atacccgcat cgaattacgc aacccgaaat
    39301 tatcccttag cgatgctaat ctcagcgccc tgctgaccgg aaaaaccttt gagttggtgc
    39361 ccggtgatgg cgagccacgc aaagagttcg ttgttgtgcc aggcgaaaaa gcactgctac
    39421 atgaacctga tgttctgacg ctgaccctga cagcaccgga aagttacggt attgatgctg
    39481 gtcagccgct cattcttcac ggcgtgcagg taggccaggt tattgatcgt aaactcacca
    39541 gcaaaggcgt tacctttacc gtcgccatcg agcctcagca tcgcgaactg gtaaaaggcg
    39601 atagcaaatt tgtcgtcaac agccgtgtcg acgtgaaggt ggggctggat ggcgttgagt
    39661 ttcttggtgc cagcgcctca gaatggatta acggcgggat acgtattctg ccaggcgata
    39721 aaggtgagat gaaagccagc tatccactgt atgccaatct ggaaaaagcg ctggagaaca
    39781 gccttagcga tttacccacc acaaccgtga gtttgagtgc agagacgctg ccggatgtgc
    39841 aggcaggatc ggtagtgctg taccgtaaat ttgaagttgg tgaagtgatt accgtgcgtc
    39901 cgcgagctaa cgcgtttgat atcgatctgc atattaagcc ggagtatcgc aaccttctga
    39961 ccagcaatag cgtgttctgg gcagaaggcg gggcgaaagt tcagctgaat ggtagtggcc
    40021 tgaccgtaca ggcatccccg ctctccagag cattaaaggg agccattagc ttcgataacc
    40081 tcagcggtgc cagcgccagt cagcgtaaag gcgacaaacg aattctgtat gcttccgaaa
    40141 cagcggcccg tgcggttggt gggcagatta cgcttcacgc tttcgatgcc ggaaaactgg
    40201 cggtcgggat gccaattcgc tatctcggta ttgatatcgg gcaaatccag acgctggatc
    40261 tgattaccgc gcgcaatgaa gtacaggcaa aggcggtgct ctatccggag tatatccaga
    40321 ccttcgcccg cggcggtacg cgcttctcgg tggtcacacc gcaaatttca gccgcgggcg
    40381 ttgagcatct agatactatc ctccagccgt atatcaacgt cgaaccaggt cggggtaatc
    40441 ctcgccgtga ctttgagttg caagaagcca ctattactga ttcgcgttac ctagatggct
    40501 taagcattat tgtcgaagca ccggaagccg gttcgttagg tattggtacg cctgtgctgt
    40561 tccgtggtct ggaagtcggt acggttaccg gaatgacgct ggggacattg tcagatcgcg
    40621 tgatgattgc gatgcgcatc agtaaacgct atcaacacct ggtgcgtaac aattccgtct
    40681 tctggttggc atcgggttac agtctggact ttggtctgac gggcggcgta gtgaaaaccg
    40741 gcacctttaa ccaatttatc cgtggcggca tcgccttcgc cacgcctccg ggtacgccac
    40801 ttgcaccgaa agcccaggaa ggcaaacact tcctgttgca ggaaagtgaa ccgaaagagt
    40861 ggcgtgaatg gggaactgcg cttcccaaat aatgcccact gctccggcgt gcctgcgccg
    40921 gagcgtttat gctaaactgc gcgcctgttt ttttgccagt ggtacatgct cgtggcccaa
    40981 cacaccgttt atttcccgga cgcgtttctg acacaaatgc gcgaagctat gccttcgacg
    41041 ctctcatttg atgattttct tgccgcctgt cagcgcccgt tgcgccgcag cattcgcgtt
    41101 aatacgctga aaatctccgt tgctgatttc ctgcaattaa ccgcgcctta tggctggacg
    41161 cttacgccaa ttccgtggtg tgaagaaggt ttctggattg aacgcgacga tgaagatgca
    41221 ttgccattgg gtagtaccgc cgagcattta agtggcctgt tttatattca ggaagccagt
    41281 tcaatgttgc ccgtcgccgc cttgtttgct gacggtaatg caccacagcg ggtgatggat
    41341 gtcgcagctg cgcctggctc caaaacgacg caaattgccg cgcggatgaa taacgaaggg
    41401 gcaatccttg ccaatgagtt ttccgccagt cgggtaaaag tgttacatgc caatatcagc
    41461 cgctgtggca tcagtaatgt tgcgctcaca cattttgatg gccgcgtgtt tggtgcggca
    41521 gtgccagaaa tgtttgatgc cattttgctg gacgctccct gctccggcga aggcgtggtg
    41581 cgtaaagatc ccgatgcgct aaaaaactgg tcaccagaaa gcaatcagga aatcgcagct
    41641 acccaacggg aactgatcga cagcgccttt catgcattac gccctggcgg tacgctggtt
    41701 tactcgacct gtaccttaaa ccaggaagaa aacgaagccg tttgcctgtg gctgaaagag
    41761 acttaccccg acgcagtaga gtttttaccg cttggtgatc tcttccctgg tgcaaacaag
    41821 gcgctgaccg aggaaggctt tttgcatgtt ttcccacaaa tttacgactg cgaaggcttc
    41881 tttgttgctc gtctgcgtaa aactcaggcg attcccgcct tacccgcccc caaatacaaa
    41941 gtcggtaatt ttccgttcag cccggtgaaa gatcgcgaag ctggacaaat tcggcaggcg
    42001 gctgcaggtg ttggcttaaa ctgggatgaa aacctgcgcc tctggcagcg tgacaaagaa
    42061 ctgtggttgt tcccggtggg cattgaagcc ctgatcggta aagtccgatt ttctcggttg
    42121 gggattaaac ttgccgagac gcacaacaaa ggttatcgct ggcagcatga agcggttatt
    42181 gctcttgcct cacccgataa tatgaatgca ttcgagctga caccgcagga agcggaggag
    42241 tggtatcgcg ggcgcgatgt ttacccgcaa gccgcgccag tggcggatga cgtgttggtt
    42301 actttccagc atcagccgat tggtttagcc aaacggattg gttcgcgact gaaaaacagc
    42361 tacccgcgtg aactggtgcg cgatgggaaa ctttttaccg gtaacgccta acagcgcaca
    42421 aaaaaacgca ctttttgact ggcacattcg gctgcctcaa ctaggctgaa aaatggtgcg
    42481 atcggactgg tcgtaccaca accggcagct aaatggagag cacgaagatg aaaaccagtg
    42541 tgcgcatagg cgcttttgaa atcgacgacg gcgaatcgcc gggtgatcga acgttaacca
    42601 ttccttgtaa atcagacccc gatttatgta tgcaactgga tgcctgggat gctgaaacca
    42661 gtatccctgc cctgctaaat ggcgaacact ctgtccttta ccgtacccgt tacgatcaac
    42721 aatctgatgc ctggattatg cgtcttgcct gatccaaaaa gaacccgtcg gcatggcggg
    42781 ttatttgtcc tggttattcc cccgttgtaa aatctctcct aaacttaacg gtacggcacc
    42841 atacttcggg gatgaaatgt tcgcgctggt actttttgtt tgctacctgg atggcggttg
    42901 tgaagatatt attgtggatg tctacaacac ggaacagcag tgtctttatt ctatgagcga
    42961 tcaacggatc cgccatggcg gttgttttcc gattgaggat tttatagatg gtttctggcg
    43021 acctgcacag gagtacggtg atttttaatt attgcaattg cacaagagtc agttcgcccc
    43081 caaagacagc accggtatca atataatgca ggttgccaat atccacgcga tgtcgcaacg
    43141 gtgtatgacc aaaccagaaa tgatcagcac ctgtaattcc ctgccctttt tggcgttcac
    43201 ctaatcgcga gcggctccac aagacctgat gcaaatcaac gtccttttgc cattcataaa
    43261 catcatctgg ataatcggca tgagcaataa catgtttgcc ggtacgactg tgtacttcaa
    43321 gaataaaggg caa
//
LOCUS       DAJVTL010000021        42819 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.021, whole genome shotgun sequence.
ACCESSION   DAJVTL010000021 DAJVTL010000000
VERSION     DAJVTL010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 42819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42819
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.021"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1325)
                     /gene="tssC"
                     /locus_tag="OQQ26_001076"
     CDS             complement(<1..1325)
                     /gene="tssC"
                     /locus_tag="OQQ26_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HCS1856609.1"
                     /translation="MSVQQEHTTSETATLTTTESGGVYQSLFDKINLTPESSIQEIDL
                     WQNSETLADASPNERVTAAIHVLLSCLAKSGENVVKLDKSLLDFHIDDLDQKISKQLD
                     AVMHHPEFQKVESLWRGTWFVVQRTDFRKNVRIELLDISKEHLRQDFDDSPEIIQSGL
                     YRHTYIQEYDTPGGEPVASLISSYEFDNSPQDIALLRNISRVSAASHMPFIGSVGPKF
                     FLKNSMEEVAAIKDIGNYFDRAEYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTVP
                     VRSFNYVEEVKGPDHEKYLWTNASCAFAANMVKSFVNNGWCVQIRGPQAGGAVADLPI
                     HLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYACFFSANSAQKPALY
                     DTADATANSRINARLPYIFLLSRIAHYLKIIQRENIGTTKDRRVLELEL"
     gene            complement(1384..1884)
                     /gene="tssB"
                     /locus_tag="OQQ26_001077"
     CDS             complement(1384..1884)
                     /gene="tssB"
                     /locus_tag="OQQ26_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HCS1856610.1"
                     /translation="MADSFQNEVPAARVNIKLDLHTGNAKKKVELPLKLLAVGDYSNG
                     KEQRPLSERDKVDINKNNFNSVMAEFSPAVNLTVEDTLSGTGNEQNIALEFKSLKDFE
                     PEQVAKNIPQLRVLLAMRNLLRDLKSNLLDNATFRRELENILKDPTLSSELRDELAKI
                     APQENV"
     gene            complement(2517..2593)
                     /locus_tag="OQQ26_001078"
     tRNA            complement(2517..2593)
                     /locus_tag="OQQ26_001078"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2557..2559),aa:Met,seq:cat)
     gene            complement(2627..2703)
                     /locus_tag="OQQ26_001079"
     tRNA            complement(2627..2703)
                     /locus_tag="OQQ26_001079"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2667..2669),aa:Met,seq:cat)
     gene            2912..4009
                     /gene="mltA"
                     /locus_tag="OQQ26_001080"
     CDS             2912..4009
                     /gene="mltA"
                     /locus_tag="OQQ26_001080"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HCS1856611.1"
                     /translation="MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
                     DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
                     LSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
                     GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
                     SVASDRSIIPLGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
     gene            4248..5054
                     /gene="tcdA"
                     /locus_tag="OQQ26_001081"
     CDS             4248..5054
                     /gene="tcdA"
                     /locus_tag="OQQ26_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HCS1856612.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
                     AVEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
                     TVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
                     PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGT
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
     gene            complement(5105..5548)
                     /gene="csdE"
                     /locus_tag="OQQ26_001082"
     CDS             complement(5105..5548)
                     /gene="csdE"
                     /locus_tag="OQQ26_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HCS1856613.1"
                     /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQL
                     PALPGELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGK
                     TAAELQAQSPLALFDELGLRAQLSASRSQGLNALSEAIIAAAKQV"
     gene            complement(5548..6753)
                     /gene="csdA"
                     /locus_tag="OQQ26_001083"
     CDS             complement(5548..6753)
                     /gene="csdA"
                     /locus_tag="OQQ26_001083"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HCS1856614.1"
                     /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
                     LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
                     RPRLQPGDEIIVSVAEHHTNLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
                     SRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
                     SGHKLYGPTGIGVLYGKPELLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLADYDINQAENWSRSLATLAEDTLAKRPGFRSFRCQDSSLLAFDFA
                     GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
                     DRALELLVD"
     gene            6945..7172
                     /locus_tag="OQQ26_001084"
     CDS             6945..7172
                     /locus_tag="OQQ26_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417289.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HCS1856615.1"
                     /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
     gene            7523..8440
                     /gene="gcvA"
                     /locus_tag="OQQ26_001085"
     CDS             7523..8440
                     /gene="gcvA"
                     /locus_tag="OQQ26_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     regulator GcvA"
                     /protein_id="HCS1856616.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
                     SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
     gene            8459..8854
                     /locus_tag="OQQ26_001086"
     CDS             8459..8854
                     /locus_tag="OQQ26_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HCS1856617.1"
                     /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
                     EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
                     PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
     gene            8847..9947
                     /gene="rlmM"
                     /locus_tag="OQQ26_001087"
     CDS             8847..9947
                     /gene="rlmM"
                     /locus_tag="OQQ26_001087"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010435097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HCS1856618.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIY
                     ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
                     GYSYSNNNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
                     DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
                     QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
     gene            complement(9991..10722)
                     /gene="fucR"
                     /locus_tag="OQQ26_001088"
     CDS             complement(9991..10722)
                     /gene="fucR"
                     /locus_tag="OQQ26_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
                     /protein_id="HCS1856619.1"
                     /translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
                     QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
                     STCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQ
                     LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
                     RIGHLDEVTHIISDERQVATSLVTA"
     gene            complement(10780..11202)
                     /gene="fucU"
                     /locus_tag="OQQ26_001089"
     CDS             complement(10780..11202)
                     /gene="fucU"
                     /locus_tag="OQQ26_001089"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HCS1856620.1"
                     /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPTHSMGPQVIR
                     ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
                     IRINRFAFYERAQKAFAIVITGERAKYGNIFLKKGVTP"
     gene            complement(11204..12549)
                     /gene="fucK"
                     /locus_tag="OQQ26_001090"
                     /pseudo
     CDS             complement(11204..12549)
                     /gene="fucK"
                     /locus_tag="OQQ26_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417283.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
     gene            complement(12658..14433)
                     /gene="fucI"
                     /locus_tag="OQQ26_001091"
     CDS             complement(12658..14433)
                     /gene="fucI"
                     /locus_tag="OQQ26_001091"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HCS1856621.1"
                     /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
                     LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
                     RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
                     RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
                     QKIYDEAELEMALTWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
                     NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
                     ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
                     SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADTCLAATEWCPAIHEYFRGGGYSSRF
                     LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
                     TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
                     WAAHGMDIEGQDYRACQNYGPLYKR"
     gene            complement(14466..15782)
                     /gene="fucP"
                     /locus_tag="OQQ26_001092"
     CDS             complement(14466..15782)
                     /gene="fucP"
                     /locus_tag="OQQ26_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HCS1856622.1"
                     /translation="MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNL
                     NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA
                     LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQT
                     FNSFGAIIAVVFGQSLILSNVPHQSHDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAI
                     VLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA
                     CWSYLIRYAVEEIPGMTADFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI
                     AMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTII
                     GGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQTATN"
     gene            16329..16976
                     /gene="fucA"
                     /locus_tag="OQQ26_001093"
     CDS             16329..16976
                     /gene="fucA"
                     /locus_tag="OQQ26_001093"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HCS1856623.1"
                     /translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
                     IPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
                     ILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIAC
                     EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
     gene            17004..18152
                     /gene="fucO"
                     /locus_tag="OQQ26_001094"
     CDS             17004..18152
                     /gene="fucO"
                     /locus_tag="OQQ26_001094"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417279.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HCS1856624.1"
                     /translation="MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQC
                     GVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDT
                     CKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR
                     KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHI
                     KAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPH
                     GVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVG
                     IPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAW"
     gene            complement(18207..18962)
                     /gene="xni"
                     /locus_tag="OQQ26_001095"
     CDS             complement(18207..18962)
                     /gene="xni"
                     /locus_tag="OQQ26_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HCS1856625.1"
                     /translation="MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH
                     AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSASGNE
                     ADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPCIDKEFGV
                     QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL
                     ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR"
     gene            complement(19073..20440)
                     /gene="sdaB"
                     /locus_tag="OQQ26_001096"
     CDS             complement(19073..20440)
                     /gene="sdaB"
                     /locus_tag="OQQ26_001096"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HCS1856626.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
                     HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
                     DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
                     GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVACD"
     gene            complement(20498..21787)
                     /gene="sdaC"
                     /locus_tag="OQQ26_001097"
     CDS             complement(20498..21787)
                     /gene="sdaC"
                     /locus_tag="OQQ26_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease SdaC"
                     /protein_id="HCS1856627.1"
                     /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLSPA
                     DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
     gene            complement(22344..23708)
                     /gene="ppnN"
                     /locus_tag="OQQ26_001098"
                     /gene_synonym="ygdH"
     CDS             complement(22344..23708)
                     /gene="ppnN"
                     /locus_tag="OQQ26_001098"
                     /gene_synonym="ygdH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HCS1856628.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
                     DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYHIIIDDAAEVARQMKKSMP
                     LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
                     SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICT"
     gene            complement(23820..24668)
                     /gene="queF"
                     /locus_tag="OQQ26_001099"
     CDS             complement(23820..24668)
                     /gene="queF"
                     /locus_tag="OQQ26_001099"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HCS1856629.1"
                     /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRNLNRDPLGL
                     KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
                     EFTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
                     TRLVRQ"
     gene            24736..25281
                     /gene="syd"
                     /locus_tag="OQQ26_001100"
     CDS             24736..25281
                     /gene="syd"
                     /locus_tag="OQQ26_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HCS1856630.1"
                     /translation="MDDLTAQALKDFTVRYCDAWHEEHKSRPLSEELYGVPSPCIISI
                     TEDAVYWQPQPFTGEQNVNAVERAFDIVIQSTIHTFYTTQFAGDMHAQFGDIKLTLLQ
                     TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
                     RKRTHLASNLAEFLNQLKPLL"
     gene            25903..26232
                     /locus_tag="OQQ26_001101"
     CDS             25903..26232
                     /locus_tag="OQQ26_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HCS1856631.1"
                     /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
                     MEPLEWLQWVLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDA
                     LFADDAS"
     gene            26232..27014
                     /gene="truC"
                     /locus_tag="OQQ26_001102"
     CDS             26232..27014
                     /gene="truC"
                     /locus_tag="OQQ26_001102"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HCS1856632.1"
                     /translation="MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIG
                     QYVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
                     PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYSLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
                     IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
     gene            27032..27481
                     /locus_tag="OQQ26_001103"
     CDS             27032..27481
                     /locus_tag="OQQ26_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HCS1856633.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
                     LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
                     GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS"
     gene            27916..29269
                     /gene="gudP"
                     /locus_tag="OQQ26_001104"
                     /pseudo
     CDS             27916..29269
                     /gene="gudP"
                     /locus_tag="OQQ26_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417269.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate/glucarate/glycerate transporter
                     GudP"
     gene            29271..30608
                     /locus_tag="OQQ26_001105"
     CDS             29271..30608
                     /locus_tag="OQQ26_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000235397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HCS1856634.1"
                     /translation="MATQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
                     NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
                     WTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQRDAITVLGYLFYIGDRTKTD
                     LPYLEKTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
                     VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEEPCGAEQGFSGREVMAE
                     FRRATGLPVATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQDSVRVAQMCHEFGLT
                     WGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQSLTKEPFEIKGGLVQVP
                     EKPGLGVEIDMDQVMKAHELYQKHGLGARGDAMGMQYLIPGWTFDNKRPCMVR"
     gene            complement(30840..33596)
                     /gene="barA"
                     /locus_tag="OQQ26_001106"
     CDS             complement(30840..33596)
                     /gene="barA"
                     /locus_tag="OQQ26_001106"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HCS1856635.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
                     LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
                     NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
                     PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
                     KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
                     IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
                     VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQILLDFLPEVRNKVEEQLVGENPEGL
                     VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
                     KILG"
     gene            33653..34954
                     /gene="rlmD"
                     /locus_tag="OQQ26_001107"
     CDS             33653..34954
                     /gene="rlmD"
                     /locus_tag="OQQ26_001107"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HCS1856636.1"
                     /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL
                     LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
                     SKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
                     QCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK
                     LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
                     RALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVSVEGVPALVEKGQQNARLNGLQ
                     NVTFYHENLEEDVTNQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
                     TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
     gene            35002..37236
                     /locus_tag="OQQ26_001108"
     CDS             35002..37236
                     /locus_tag="OQQ26_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HCS1856637.1"
                     /translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ
                     QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
                     ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGS"
     gene            37314..37562
                     /gene="mazE"
                     /locus_tag="OQQ26_001109"
     CDS             37314..37562
                     /gene="mazE"
                     /locus_tag="OQQ26_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HCS1856638.1"
                     /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
                     EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
     gene            37562..37897
                     /gene="mazF"
                     /locus_tag="OQQ26_001110"
     CDS             37562..37897
                     /gene="mazF"
                     /locus_tag="OQQ26_001110"
                     /EC_number="3.1.27.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease MazF"
                     /protein_id="HCS1856639.1"
                     /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
                     MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLI
                     KAKINVLIG"
     gene            37968..38759
                     /gene="mazG"
                     /locus_tag="OQQ26_001111"
     CDS             37968..38759
                     /gene="mazG"
                     /locus_tag="OQQ26_001111"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HCS1856640.1"
                     /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
                     DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHIFAD
                     SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
                     TLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
                     ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
     gene            38987..40624
                     /gene="pyrG"
                     /locus_tag="OQQ26_001112"
     CDS             38987..40624
                     /gene="pyrG"
                     /locus_tag="OQQ26_001112"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HCS1856641.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
                     AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
                     TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
                     VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
                     DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
     gene            40712..42010
                     /gene="eno"
                     /locus_tag="OQQ26_001113"
     CDS             40712..42010
                     /gene="eno"
                     /locus_tag="OQQ26_001113"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HCS1856642.1"
                     /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
                     KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(42070..>42819)
                     /locus_tag="OQQ26_001114"
     CDS             complement(42070..>42819)
                     /locus_tag="OQQ26_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
                     /protein_id="HCS1856643.1"
                     /translation="LNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRV
                     FDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQ
                     KLAQGLELAIIALNNQLTSQHQYPANPSESESTSSTDHYYFAIFWVFAVMFFPFWFFH
                     QGSNFCRACKSGVCISAIYLLDLFLFSDKTFSIAVFSFFFTFTIFMVFTCLCVLQKRA
                     SGRSYHSDNSGSGGGSSGGGFSGGGGASGRW"
BASE COUNT        10732 a        10245 c        11212 g        10630 t
ORIGIN      
        1 ttcagttcca gttccagcac gcgtctgtct ttggtggtac cgatattctc gcgctggatg
       61 attttcaggt aatgcgcaat gcgggacagc aggaagatat agggcaaacg ggcgttaata
      121 cggctgttgg cagtggcatc agcggtatca tacagcgccg gtttctgggc agagtttgcc
      181 gagaagaagc aggcgtaatc gcgattctta taataagaga gcggaataaa gccaaggttg
      241 gcaaattcaa attcgcgggt ttccgggatc atcacttcgg acggaatttt gacctgattg
      301 ccggtgccga gatcgtaaag atggattggc agatcggcca ctgcgccacc tgcctgtgga
      361 ccacggatct gcacgcacca gccattattc acaaagctct tcaccatatt ggcggcaaag
      421 gcgcacgagg cgtttgtcca gaggtacttt tcgtgatccg ggcctttgac ttcttccaca
      481 tagttaaagc tgcgtaccgg caccgtgtcc ggcccatagg gcagacgacc cagcacgcgc
      541 ggcatcacta atcccacgta gcgactgtca tccgtatcgc ggaacgactt ccatttaata
      601 tattcggcgc ggtcaaagta gttgccgata tctttaatcg cggcgacttc ttccatcgaa
      661 tttttaagga agaatttcgg tccgacggaa ccgataaaag gcatatggga agcggcagac
      721 actctggaaa tattgcgcag cagggcaata tcctgcgggc tgttatcaaa ttcatagctg
      781 gaaattaatg aggcaacagg ttcgccaccc ggcgtatcgt actcctgaat atatgtatga
      841 cgatataaac cgctctgaat gatttccggg gagtcgtcga aatcctgacg cagatgctct
      901 ttgctgatat ccagcaattc aattctgaca tttttgcgaa aatcagtgcg ctgtacgacg
      961 aaccatgtac cacgccacag cgactcgact ttctggaatt caggatggtg cattactgca
     1021 tcaagctgtt tactgatttt ctgatccaaa tcgtcgatat gaaaatccag caggctcttg
     1081 tcgagtttga ccacgttctc gcctgatttc gccagacagg aaagcagaac gtgaatcgcc
     1141 gctgtcacgc gctcattggg tgaggcatcc gccagtgttt cgctgttttg ccataaatct
     1201 atttcctgaa tggaagactc cggggttaaa ttaattttat caaacaggga ctgataaacg
     1261 ccgccggact cagtggtggt cagtgttgca gtttcagagg tggtatgttc ttgttgtaca
     1321 gacatcagca tttccttttc agtgatcctt tcttctccgg tttaacctga atatcacttc
     1381 gggttaaacg ttctcctgcg gcgcaatttt cgccagctca tcacgcagtt ctgaactgag
     1441 cgttgggtct ttcaggatat tttccagttc acggcgaaac gtcgcgttat ccagcagatt
     1501 ggatttcagg tcacgtaata aattgcgcat agcgagtaat acacgaagct gtgggatatt
     1561 ttttgctacc tgttcgggtt caaaatcttt caggctttta aattcaagcg cgatattttg
     1621 ttcattaccg gttccactta gagtgtcctc tactgttaaa ttaaccgcag gcgaaaattc
     1681 tgccatgaca ctgttgaagt tgtttttatt gatatcaacc ttgtcccgtt cggacagcgg
     1741 acgttgctct ttcccgttac tgtaatcgcc aacagcaaga agcttgaggg ggagttcaac
     1801 tttctttttg gcattgcctg tatgcaggtc aagcttgata tttacacgag cggcgggaac
     1861 ttcattctga aaactgtcgg ccatatcctt ttcctcatca tccacttttt ctgatggtta
     1921 ttgacataat tatattcagg ggattatcgg atgatttaaa taaaaagcaa tgatgaggaa
     1981 aatatacaaa tgaataatat atttttctgg ggaatagata cagttgtatc attttagata
     2041 ttgtttagcc tcttgattat ttttcgggag agggcggcct tatctggtga gagaatttgg
     2101 catgaaactt aaaataataa taagatgaac ttcacaaatt tcggttttta agaaattagg
     2161 tagtgtggga gtctattaag gaattcacta aaattattgt acgggcttcc acaaaaaatt
     2221 attaattttt ctactaatta aagtttgtgt gctttttgta caataattat ataagcgtag
     2281 cctccagttg tgatattgaa atgttaacat aaccaaaaca aattgattta tagaatatgt
     2341 aagcaaagtt cattgatggg gtatatattt aatatataaa taagaaggat ggctttgatt
     2401 ggggggatca acggtttact cattgtttca ggcttcactg aaacggataa ggaagcgtaa
     2461 aaacgaaaaa accgcaagtt aatggtagcg ttgcggtttc tgatattcta ataaattggt
     2521 tgcgggggcc ggatttgaac cgacgacctt cgggttatga gcccgacgag ctaccaggct
     2581 gctccacccc gcgtcaccgt actgctttac ttcatcaaat tttaattggt tgcgggggcc
     2641 ggatttgaac cgacgacctt cgggttatga gcccgacgag ctaccaggct gctccacccc
     2701 gcgtccgtgg atgcgcacta tactccgctc gcgttttcat gcaacctttt ttttaccccg
     2761 atcacggatt tggcatgatt ttgaacaaaa acaaatcact aaagcctatt ttttgtgcaa
     2821 aatttgcgtc agggagaggc tgctcatttc attaaatgtg gcggtttgtt atcttcgttg
     2881 cgccttattt tttaacctga agaagagaac aatgaaagga cgttgggtaa agtaccttct
     2941 tatgggcacg gttgtggcaa tgcttgccgc ctgctcttcc aaaccaaccg atcgcggaca
     3001 gcaatataaa gacgggaaat ttacccagcc tttctctctg gtgaaccagc cagatgccgt
     3061 tggcgcgccg attaacgccg gtgattttgc cgagcaaatt aaccatatcc gtaattcgtc
     3121 accgcgtctg tatggcaacc agagtaatgt ttataacgcg gtgcaagagt ggctgcgcgc
     3181 aggcggtgat acccgcaata tgcgtcagtt cggcattgat gcctggcaga tggaaggtgc
     3241 cgacaactat ggtaacgtgc agtttacagg ctattacacg ccggtaattc aggcgcgcca
     3301 tacccgccag ggcgagttcc agtatccgat ttaccgtatg ccgccaaaac gtggtcgtct
     3361 gccgtctcgt gcggagatct acgcaggggc gctgagtgat aaatatattc tcgcttacag
     3421 caactccctg atggataact tcattatgga tgtgcagggt agcgggtata tcgactttgg
     3481 tgatggcagt ccgcttaact ttttcagcta tgcagggaaa aacggtcatg cctatcgcag
     3541 cattggtaag gtgctgatcg accgtggcga agtgaaaaaa gaagatatgt cgatgcaggc
     3601 gattcgtcat tggggcgaaa cacacagtga agccgaggtt cgcgagctgc tggaacagaa
     3661 cccgtctttc gtcttcttta aaccgcaatc ttttgcaccg gtgaaagggg caagtgcggt
     3721 gccgctggtt ggccgtgctt ctgttgcctc cgatcgttca attattccgc taggtactac
     3781 cttgctggca gaagtgccgc tgctggataa taacggcaaa tttaacggtc agtacgaatt
     3841 gcgtctgatg gtggcgttgg atgtcggggg cgcaatcaaa ggccaacact tcgatatcta
     3901 tcaagggatc gggccggaag ccggacaccg cgcaggttgg tacaaccact atggacgtgt
     3961 ctgggtgctg aaaaccgccc cgggcgcagg taacgtcttt agcggctgat gtgatattct
     4021 gtatgccgtt tttacggata tgacagggtg aggggtaacc tcacatcctg attattgact
     4081 aagtgcgcgt tgttcatgcc ggatgcggcg tgaacgcctt atccggccca caaatcatgc
     4141 aaatccaaaa tattgcagga gttatgtagg cctgataagc gtagcgcatc aggcatttat
     4201 gcgtttaggg tgagggaaaa cctcaccctt tttaattctg aggtgctatg tctgtggtaa
     4261 ttagtgatgc atggcgtcag cgttttggtg gcacagcgcg tctgtatggt gaaaaagcgt
     4321 tgcaactgtt tgctgacgcg catatttgtg tggtcggtat cggtggtgtc ggttcctggg
     4381 cggtagaagc gctggcgcgc acggggattg gcgcaatcac gcttatcgat atggatgatg
     4441 tgtgcgtcac caataccaat cggcaaattc atgccctgcg cgataacgtt gggctggcaa
     4501 aagcggaagt catggcggaa cgtattcgcc agattaaccc ggagtgccgt gtaacggtgg
     4561 tggatgattt cgtgacgccg gataacgtag cgcagtatat gagcgtgggt tattcgtacg
     4621 tgattgatgc cattgatagt gtacgaccca aagcggcgct gattgcttat tgtcggcgca
     4681 ataaaatccc gctggtcacg accggtggcg cgggtgggca gattgatccg acgcagattc
     4741 aggttaccga tctggcgaaa acgattcagg acccgctggc ggcgaagttg cgcgagcgcc
     4801 tgaaaagcga ttttggcgta gtgaaaaaca gtaaaggtaa gctcggcgtg gattgcgtgt
     4861 tctctaccga agcattggtg tacccgcagt cagacggcac ggtctgtgca atgaaagcca
     4921 cggcagaagg gccgaagcgg atggattgtg catctggatt tggcgcggcg acgatggtga
     4981 ccgccacctt tggttttgtt gcggtttctc atgcgctgaa gaagatgatg gcgaaagcgg
     5041 cgcgtcaggg gtaaacaatc aggtcggatg cgacgcgaac gtcttatccg acctggttct
     5101 gtgcttaaac ctgcttcgcc gcagcgataa tcgcctcgct taacgcattc aacccctggc
     5161 tgcgtgaggc gctaagctgt gcacgcaatc ccagctcatc aaacaatgcc agcggcgact
     5221 gtgcctgcaa ttcggcggcg gttttcccct caacggcagt caacaacacc gccagcaggc
     5281 cgcgcacaat gcgcccttca ctgtcgccaa agaagtgcat tttaccgttt tcagccacgg
     5341 tatatcccag ccagacgcgg ttttcgcatc cggcaatttc tttggcctgt gcttttaact
     5401 cgcctggcaa agccggaagc tgtttcccca gcatgatcaa ctggcgatat ttatcttccc
     5461 attgcgtcaa cggtgcgaag gtattgcgta acgtttctgc ggttacggtt gtgccgaacg
     5521 gatgtccggc gaattgcggg tttgtcatta atccaccaat aattccagcg cgcggtcaac
     5581 ggcattcacc agcgcatcca catcactctt tgtattatat ggcgcaaatg aggcgcgcag
     5641 tgtgccggtt acgcctaatt ctgccagtag cggctgagcg caatgctgcc cggcccgcag
     5701 ggcaataccg tactccgcca gcagcgtcac catatcgctg tgatgaacgc cagcaaaatc
     5761 aaaggccagc aggctggaat cctggcagcg aaatgagcgg aagccaggac gttttgccag
     5821 cgtatcttcc gccagcgttg ctaagctacg gctccagttt tcggcctggt tgatatcgta
     5881 atctgccagc cattccagcg ccgcgcttaa tcctatgaca ccagcgacat ttggcgttcc
     5941 ggcttccagt ttccacggcg cagattgagt cgtgaagccg tcaaaactca cttcgtgaac
     6001 cattttgccg ccgcccagcc agggcgacat cgcttccagt agttctggtt tgccatacag
     6061 cacgccgata cctgtcgggc catacagttt gtgacctgaa aaagcataga aatcgatatc
     6121 cagttgctga acatctgcgg ggaaatgcac cgccccctga gcaccatcaa ccatcaccac
     6181 catcccggct gaatgagcaa aggtaatcgc tcgcgccaga tccgggcaac cgccagtcac
     6241 gttcgacatc tgacccaacg ccagaatccg actacgggga gtaatcagtt ctggcaacaa
     6301 atcgacatcc ggcagtcgct gcgcattaag cggcaatttc accactttgg ctccagtttg
     6361 ttgggcgacc atcagccagg ggacgaggtt agtgtggtgt tctgccacgc tgacaataat
     6421 ctcatcgccc ggttgcagac gcggacgcgc atagcattgt gccaccatgt tgatggattc
     6481 agtggtgccg cgcgtccaga cgatagtttt atcatccggt gcattcagta attgcgccac
     6541 tttctctcgt gcagcttcat aacgcgcggt caggcgttgg gcttcggcaa actggctgcg
     6601 atggacgttt ccggcgctca ggctgtaaaa ctgtcgagtg gcttcaacca cggcttcagg
     6661 tttaagcgcg gtcgcggcgc tgtcgagata gacgcccgca tcctgtagtg cgggaaactg
     6721 ggcgcgaaac tgcgcgggat taaaaacgtt catggtactc ctcggcttga tgcaccgatc
     6781 gtgacgcaaa attcactttg atacaaggag agtgctaacc atcagaatta tctggatatc
     6841 ctggcgaagc cgcgtaagta acatatgctg aatagtgtta ggcgttaatt ttagcctgtt
     6901 aatcaatact attaagattt attaatcgct ttaaggagaa gatgatgaaa aagactgccg
     6961 caattatttc tgcctgtatg ctgacttttg ccctgagcgc ctgttccggt tcgaactatg
     7021 tgatgcacac caatgacgga cgtaccatcg tctctgacgg caaaccacag actgataacg
     7081 ataccggtat gatttcgtat aaagacgcta atggcaacaa acagcagatc aaccgtactg
     7141 acgtgaaaga gatggtcgaa ctggatcagt aattcgcgat cgcaagggaa aaaaaagcac
     7201 cgcaattagg cggtgctaca ttaatcacta tggacagaca gggtaaatgt acaggaagtg
     7261 aaaaaaggta gctttgctac catggtctga atcgcagacc aattgcaaac acaacaacac
     7321 aacatcacaa ccgtaagcca aaagttcacc agaatacgca ttccgataaa acttttcgtt
     7381 ccggctcagg aagtgccgcc actataggta tttgctggta gaagctcaac ggacaattta
     7441 taatggctca gattaaaaaa actaataggt tacacagtgt aatctaattg ttaaattcac
     7501 ttaacatcaa agtttaaaag ccatgtctaa acgattacca ccgctaaatg ccttacgagt
     7561 ttttgatgcc gcagcacgcc atttaagttt cactcgcgca gcagaagagc tttttgtgac
     7621 ccaggccgca gtaagtcatc aaatcaagtc tcttgaggat tttttggggc taaaactgtt
     7681 ccgccgccgt aatcgttcac tcctgctgac cgaggaaggg caaagctatt tcctcgatat
     7741 caaagagata ttttcgcaat taaccgaagc gacgcgtaaa ctccaggccc gtagcgccaa
     7801 gggggcgttg acggtcagtt tactccccag tttcgccatt cattggttgg ttccgcgact
     7861 ttccagcttt aattcagctt atccgggaat tgacgttcga atccaggcgg ttgatcgtca
     7921 ggaagataag ctggcggatg atgttgatgt ggcgatattt tatggtcggg gcaactggcc
     7981 ggggctacgg gtggaaaaac tgtacgccga atatttattg ccggtgtgtt cgccgctact
     8041 gctgacaggc gaaaaaccct tgaagacccc ggaagatctg gctaaacata cgttattaca
     8101 tgatgcgtca cgccgtgact ggcagacata tacccgacag ttggggttaa atcatatcaa
     8161 cgttcagcaa gggccaattt ttagtcatag cgccatggtg ctgcaagcag ctattcacgg
     8221 gcagggagtg gcgttggcaa ataacgtgat ggcgcaatct gaaatcgagg ccggacgtct
     8281 tgtttgcccg tttaatgatg ttctggtcag taaaaatgct ttttatctgg tttgtcatga
     8341 cagccaggca gaactgggta aaatagccgc ctttcgtcaa tggatcctgg cgaaagccgc
     8401 tgctgaacaa gaaaaattcc gctttcgtta tgaacaataa tttacgtagg gtacgaccat
     8461 gaccagccgt tttatgctga ttttcgccgc cattagcggc ttcatttttg tggcactggg
     8521 cgcttttggc gcgcatgtgt taagtaaaac catgggggcc gttgagatgg gctggatcca
     8581 gaccggtctc gaataccagg cgtttcatac gctggctatc ttaggtctgg cggtggcaat
     8641 gcagcgtcgc atcagtatct ggttttactg gagtagcgtt ttcctcgcgt taggcacggt
     8701 gctgttcagc ggcagccttt attgcctggc actgtcccat ctgcgtttgt gggcgtttgt
     8761 cactccggtt ggcggcgtga gcttccttgc gggctgggcg ttaatgttag ttggtgctat
     8821 ccgtttaaag cgcaagggcg taagtcatga ataaggttgt attgctgtgc cgtccgggct
     8881 ttgaaaaaga gtgcgccgca gaaattaccg ataaagccgg ccagcgggaa attttcggtt
     8941 ttgcccgcgt gaaagagaat gcgggttatg tcatttatga atgttatcaa cctgatgatg
     9001 gcgataagtt aatccgtgag ctgccgttca gttcattaat ttttgcccgc cagtggtttg
     9061 tggtggggga actcctgcag catttgccgc cagaagatcg tattaccccc attgtcggca
     9121 tgttacaggg tgtagtagag aagggcggtg aactgcgtgt tgaagttgcc gataccaacg
     9181 aaagcaaaga gttgctgaaa ttctgccgta aattcaccgt gccgctacgc gctgccttgc
     9241 gcgatgctgg ggtgctggcg aactatgaaa cgccgaagcg tccggttgtg catgtattct
     9301 ttattgcacc aggctgctgc tataccggtt actcatacag caacaataat tcgccgttct
     9361 atatgggcat tccgcgcctg aaatttccgg cagatgcgcc gagtcgttcc acactcaaac
     9421 tggaagaggc atttcatgtg tttattcctg cggatgagtg ggatgaacgc ctggcgaacg
     9481 ggatgtgggc ggtggattta ggcgcttgcc ctggcggctg gacctaccaa ctggtgaagc
     9541 gcaacatgtg ggtttattcc gtcgacaacg gcccgatggc gcaaagtctg atggataccg
     9601 ggcaggtgac gtggctgcgg gaagacgggt tcaaattccg tccgacacgc agcaatatct
     9661 cctggatggt atgcgatatg gttgaaaaac cggcgaaagt tgcggcattg atggcgcagt
     9721 ggctggttaa tggctggtgc cgtgaaacca ttttcaacct caaactgccg atgaaaaaac
     9781 gctacgaaga agtgtcacac aatctggcgt atattcaggc acagcttgat gaacatggca
     9841 taaatgctca gattcaggcg cggcagttgt atcacgatcg cgaagaagtg acggtgcacg
     9901 tccgccgcat ctgggctgcg gtgggtggtc gtcgcgacga gcgataacag gcaaggccgg
     9961 ggcgtcgtct ccggcctgct accctttccg tcaggctgtt accaaagaag ttgcaacctg
    10021 gcgctcatca gaaataatgt gcgttacctc atccagatgc ccgatgcggg cttcccctga
    10081 acgattaaat ttacttttat caatcaataa caacgattgc gcggcacgtt ttaatagcat
    10141 cgatttgtaa tcagcgttga tggcattgga gtcccacagt gcgccgctgc tatcgatccc
    10201 ttcacaagaa aaaataaaca gatcgatttc cagcgattta agttgggaaa tcagcgaggg
    10261 attgacgtaa cagccatatt tgcgctcaag tgtgccgccg gaactgatca gttgaatgcg
    10321 ttcacgttta ccgagttcat ggcaaatcgg atggctattg gtgaagacct gaatgttgat
    10381 gtcaggcaac tggcgtgcca gataccagca agttgaactg gcgtctaagg ctatcaccat
    10441 cccttcttca atccacgcga gcgcctcgcg cgcgatatct gctttatgcg cataatggct
    10501 tttcagccgg atgtgaaagg gatcgccact gtcttgattt tgacggtgga tatatttagc
    10561 gcgcccatga ttgcgcagaa ttttaccctg cgtctgtaat tcattgagat cgcgacgaat
    10621 ggtttcttta ctgaccttta gctgttcaga gagagcttcc gtggtcaggc tggtatggtt
    10681 cagcagcagg tcgactatcg cttgctggcg tgccgctttc atatttttca ccccatcatt
    10741 cgataaccgc ccgcgtcatg cgggcgtacc ggtatgagat tacggtgtta cccctttttt
    10801 taaaaaaata ttcccgtact tcgctcgttc gcctgtgata acgatcgcaa aggctttttg
    10861 cgcccgttca taaaacgcaa aacgattgat gcggatgatg tcaggacacg gggcttgtag
    10921 tgaaagcgca ttacggtaac gtcgttctac ttcaggatcg agagtatcac cttctaccgc
    10981 tgccatcatc accagcggcg gtgcataact gtccagttca aataacggga taatcgcctg
    11041 gagcaagtcg ctcaccaaca ggccatcagc gcggatcacc tgcggtccca tcgaatgggt
    11101 gggaaagtga gcatcggaaa aaataatttc atctccatgt cccatctctg ccagcacttt
    11161 caatagttcg ggagaaatta acggcgaaat tgttttcagc atttcacact tcctctataa
    11221 attcaggttc agtttgcggg tagaaataac ggtactgata atgaatctgt gcacgggctt
    11281 cttccgggct gttaaattcc cctacgccat accaaccgaa cagcgcagct cctgcgacgg
    11341 tcgtttcggc atcgtcgaga acttttaccg gaatatcaag catattggct ttaatctgat
    11401 tccacaatgt gttgcgactt cctccaccga ctaacaataa ttcagaggct ttaaagtgcc
    11461 cgattttttc cagcatttgt agattgcgct gtaattgcgc agttaaccct tccagcgccg
    11521 cgcgatagaa atgcccccgc gtggtattaa gcgtcactcc ttgccagcca gcgttctgac
    11581 acgacaataa atcacactgc attttcacac catccgcgcc aggtgcgatc agacgagctt
    11641 cttcaatcaa catttgccag ggtgtttcag ccgtccagaa cagttttctc acccattcca
    11701 gcacgccgga tgccagccat tgcatacctg ggttatacaa ccctgcctgg ctatccagtt
    11761 cgcaggtaga accggcgtac tgacttaaca gcgaagtatt aacctgggcg ctgcggacca
    11821 ttaaaatttc ccatgtgccg gaagagagca cgggttcatt ttggtcggca ccagcgccaa
    11881 aaagggcgaa ctgagtatcg tgacctgcgg aaatcaccgg tatgccaacg ggtaagccga
    11941 gcattactgc ggcgctgttc tgtagtgtac caatctgttc acccgcttcc accagacgag
    12001 ggaagagttg gcgtggaata ccggtggctt gtaaaatttg cggactgaaa tcgcgttgct
    12061 gtatatccag catctggctg gttccggcca tcgtgatatc agtagtgaat gattttcttt
    12121 caaccacacc aacttatata acgtattgaa actaaaggct ccgacgccag aaatagcctg
    12181 caaccgctgt gcggagatca accgttcaat attgtccata accgctgctg ttcgcggaca
    12241 tttccagcta atgatcggat agagcagatt gccttgctta tctaccagag cgccatccac
    12301 accaaaggtg gtgacggcga taccgcggat gtggcattca gtcagttcac tattgatttg
    12361 ccgacagcaa tcagcaaagc gttgcaaaat ggcgtctaaa gaccactggt gccaggtgtt
    12421 gttttccatc gcgatatcgc tggcattagg cgttgaggcg cgggcaacaa tttttccctg
    12481 ccgattaacc gcgatggccc tgacattggt cgcaccacag tcgagtacca ggataacttc
    12541 ttgtttcata atcgctcctg caatatagcc ggataacatt gtttatccgg ctaaccactc
    12601 ttgcttgttc aggcccggta gccggagcga ccgggcatca catcagggag taatgtatta
    12661 acgcttgtac aacggaccgt agttctggca agcgcggtaa tcctggcctt caatatccat
    12721 gccgtgcgcg gcccaggcag aaggacgata cactttggtc tcttcaacgt tgtgcataca
    12781 taccgggata cgcagcatgg aggcgagagt gataaagtct gcgccaacgt ggccgatggt
    12841 cagaacccca tggttagcgc cccagttcgc cattaccgag tacacatccg taaacggccc
    12901 tttaccggtg aggcgcggtg caaaccaggt ggttggccag gttgagttgg tgcgtttgtt
    12961 gaggatgtca tgcacatcct tcggcaattc cacgctccag ccttccgcga tttgcagtac
    13021 cggtcccagg cctttgatga tgttgacacg ggtcatggtg aacgggacgc cgccttcggt
    13081 aaggaagcgg gaagagtaac cgccgccacg gaagtattcg tggatcgccg ggcaccattc
    13141 ggtagcggcg agacaagtgt cagcctcttg ctgagagatt tcccagtgcg gcttcatcgt
    13201 cgggttacct tcgctgtcgc gttgtttaca ggaaccgtcc agcgcagcag aacctgagtt
    13261 gatcaaatgg atgatgccgt gttctgccag tccatcgagt ttatgccccg ttacacgctc
    13321 aattgcttct ggtgaccagt aggtacgcac atcggcaaat acctgagcgg tgccggtgag
    13381 ctggtgaccc attagcattg ccacgccgtt aagactgtcg ttttcggtcg ccacgacaaa
    13441 gggttcgcgc acgccattcc agtcaaatga actgttgagg atcgcttcgg cggtgtcacc
    13501 attgggatat tgatcggtcc agtgacgttg cccctggaag cccgcagcga tggcgttgta
    13561 gccaagtgat tcttccacgc gaccaatatc ggccagtttg ctgttgcctt gcatcatgtc
    13621 gcggatacac atcgccatca gtaaactttc gcgcagaact gcgcggcttt gctcggcatt
    13681 acgttgatat tgtttgttat tttcatcttc gccatagcgg aagtttttat cagcccaggt
    13741 cagcgccatt tccagttcgg cttcgtcgta aatcttctga tcgatacggc gacgcagttc
    13801 ggtcatatcc accgcctgga ctttcattcc cagccaggat tcaaagaagt tgtgatcaac
    13861 aatagaaccg gcgataccca tcgaaacgcc gcccagcgac agatagcttt tacctttcat
    13921 gctggcgacg gccaaaccgg cgcgggcaaa gcgcagcagt ttttcttcaa catcggcagg
    13981 aatcgatgtg tcatcggcat cctgaacgtc atgaccgtaa atggagaatg ccgggatgcc
    14041 tttctggctg tgagctgcca gagccgctgc caggtaaaca gcgccgggac gttcagtgcc
    14101 gttaaagccc caaatggctt tcgggcgggt tggatccatg tcgatggttt cactgccata
    14161 gcaccagcaa ggcgttaccg taatggtgag gcctacattc tggctgctga atttttcttc
    14221 gcaagcagcg gcttcagcca tacccgcgat acaggtatcg gaaatgacac actcgacggc
    14281 agctccgcag gcatggcgca gtttctcggt cagcagtgcg gccgtggctt tcgccatatt
    14341 cattgtttgt tcttcaagcg actcacgaac acccatgcga cgaccgtcaa taaccgggcg
    14401 gataccaatt ttcggtaagc tgattttttt cattacagat tcctcacttt attcggaaaa
    14461 tatgttcagt tagttgccgt ttgagaacgg aaacgggcaa agataaagat gaccgcgaag
    14521 cagagtgcgg ggatcagttc agcagttggg atgttgcccg ccgcgtcact gacaaaaccc
    14581 atgaccggag tgacaatacc gccgccaata atggtcataa cgatgaagga cgaaccgtat
    14641 ttggtgtcct ggccgagatt cttaatgccc agcgagaaga ttgttgggta ctgaatcgac
    14701 ataaaggcgc tgcataaagt cagggctatt aagcctacat gaccgccagc gaaggctgag
    14761 atcaggcaca gtgccatagc gattaatgcg taggcggcca ggactttgtg tggtgcgaag
    14821 cgactgatta gccaggtacc ggtgaaacga ccaataaaga agcacaccat ggttccggtt
    14881 aaatagttag cggcaaagtc tgcagtcata cctggaattt cttctacagc gtagcgaatc
    14941 aaatagctcc agcaggccgt ttgtgcgccg acgtagcaga attgcgctaa tactgcccag
    15001 cgccagtggc gaatacgcgc caggcgagaa agcgatgcgg agaacgatcc ttgtttggcg
    15061 tcactgtgat tatcactctg caatgccggg aatttcgtca gcatgatcag cagggcgacc
    15121 agtaacacaa tagccacgat gatcatataa ggtgtctgta ccgataatac caagctgtgt
    15181 ttatacgcac tcaattgctc tggagacatt ttatcgagaa cgtcatgcga ttgatgtggc
    15241 acgttagaca aaataagact ttgcccaaag acaaccgcga taattgcgcc aaatgagtta
    15301 aatgtttgcg cgagatttaa gcggaagtga ccactgcttt ccggccctaa taccgtaaca
    15361 aaagggtttg cggcagtttc cagacaacct aatccggctg caataataaa taggccaact
    15421 aaaaataagg tgtagttcat tatttctgca gcgggccaga ataatgcagc acccaaggca
    15481 tataaaaata atccggtaat aatccctgct ttataactga gttttttcat taatatccca
    15541 gcagggattg ggataatgaa ataaccaaag taaaaggccg attggatcag gccagcctgg
    15601 aaatttgtca gcgtaaaagc ctgctggaat tgaggtaata atatgtcgtt aagattattg
    15661 gctaccgccc aaagaaaaaa cagtgagcac agcagcgcga atggaataat gtaacttctg
    15721 ctttgccctg catctttatc taccgcacgg taactctgcg tttgtattga tgtgtttccc
    15781 atagcatcct cttaggttca gaagcttaag cacgtaatcg gttatgtttt caaaagtgca
    15841 aaaccagcga gttcgggctt catatcggtg aatatttgcc tgtctgaaat gaactcatgg
    15901 attcattttc aaataaaaaa cgctctgtaa tatgacggcg gtcacactta ttagctggaa
    15961 ggtgacttta tgtgactacc atcactttaa taatcgaaat ttcatgccca tttcagaaaa
    16021 taaatcataa aaaacacaaa ccagatgacc gtattaattg tttgtgccga aaacgggcat
    16081 ttctggcgag gggaaatgga aaaatgaccg ttttgataaa tatttttaag agcggtcatt
    16141 tttaacgggg ttataaaaag agaacttgca gttatttact gtgattagtt gagccaggtc
    16201 acaaaatata agcttgtgaa tttctttctt gttaatcagg aagaagatgg tgggtaatta
    16261 aacggctaat tcaatagtgt gaaaggaaca acattattgc cctgttttga atcagagaga
    16321 ggtagctaat ggaacgaaat aaacttgctc gtcagattat tgacacttgc ctggaaatga
    16381 cccgcctggg actgaaccag gggacagcgg ggaacgtcag tgtacgttat caggatggga
    16441 tgctgattac gcctacaggc attccatatg aaaaactgac ggagtcgcat attgtcttta
    16501 ttgatggcaa cggtaaacat gaggaaggaa agctcccctc aagcgaatgg cgtttccata
    16561 tggcggccta tcaaagcaga ccggatgcca acgcggttgt tcacaatcat gccgttcatt
    16621 gcacggcagt ttccattctt aaccgatcga tccccgctat tcactacatg attgcggcgg
    16681 ctggcggtaa ttctattcct tgcgcgcctt atgcgacctt tggaacacgc gaactttctg
    16741 aacatgttgc gctggctctc aaaaatcgta aggcaacttt gttacaacat catgggctta
    16801 tcgcttgtga ggtgaatctg gaaaaagcgt tatggctggc gcatgaagtt gaagtgctgg
    16861 cgcaacttta cctgacgacc ctggcgatta cggacccggt gccagtgctg agcgatgaag
    16921 agattgccgt agtgctggag aaattcaaaa cctatgggtt acgaattgaa gagtaatttc
    16981 gtaaagcaac aaggagaagg atgatggcta acagaatgat tctgaacgaa acggcatggt
    17041 ttggtcgggg tgctgttggg gctttaaccg atgaggtgaa acgccgtggt tatcagaagg
    17101 cgctgatcgt caccgataaa acgctggtgc aatgcggcgt ggtggcgaaa gtgaccgata
    17161 agatggatgc ggcagggctg gcatgggcga tttacgacgg cgtagtgccc aacccaacaa
    17221 ttactgtcgt caaagaaggg ctcggtgtat tccagaatag cggcgcggat tacctgatcg
    17281 ctattggtgg tggttctcca caggatactt gtaaagcgat tggcattatc agcaacaacc
    17341 cggagtttgc cgatgtgcgt agcctggaag gactttcccc gaccaataaa cccagtgtac
    17401 cgattctggc aatccccacc acagcaggca ctgcggcaga agtgaccatt aactacgtga
    17461 tcactgacga agaaaaacgg cgcaagtttg tttgcgttga tccgcatgat atcccgcagg
    17521 tggcgtttat tgacgctgac atgatggatg gtatgcctcc agcgctgaaa gctgcgacgg
    17581 gtgtcgatgc gctcactcat gcgattgagg ggtatattac ccgtggcgcg tgggcgctaa
    17641 ctgatgcgct gcacattaaa gcgattgaaa tcattgctgg ggcgctgcga ggatcggttg
    17701 ctggtgataa ggatgccgga gaagaaatgg cgctcgggca gtatgttgcg ggtatgggct
    17761 tctcgaatgt tgggttaggg ttggtgcatg gtatggcgca tccactgggc gcgttttaca
    17821 acactccaca cggtgttgcg aacgccatcc tgttaccgca tgttatgcgt tataacgctg
    17881 actttaccgg tgagaagtac cgcgatatcg cacgcgttat gggcgtgaaa gtggaaggta
    17941 tgagcctgga agaggcgcgt aatgccgctg ttgaagcggt gtttgctctc aaccgtgatg
    18001 tcggtattcc gccacatttg cgtgatgttg gggtacgcaa ggaagacatt ccggcactgg
    18061 cgcaggcggc actggatgat gtttgtaccg gtggcaaccc gcgtgaagca acgcttgagg
    18121 atattgtaga gctttaccat accgcctggt aaatgcgctg atgtgataat gccggatacg
    18181 acgtttgcgg cgtatccggc acgccgttac cgtaccaacc gcaattgctg taaattgccg
    18241 tcgatatgca aatcggtttg taagcgggca atatcgcggc acagaaacgc catctcttta
    18301 tgggtttcta attttttgcg ccacttttcg gcaaccgcat ccagattctc atatatccct
    18361 tccagactct gaaactcgac cagcagctgc gtggcgcttt ttggtccgat tcccgcaaca
    18421 cccggtacct ttgaactgct gatccccgca agtccccagt aatcgggcaa ctgctgcggt
    18481 tgaacgccaa attctttatc gatacatggc gcatccagcc aacgtttctg gaagtaatca
    18541 cgaatacgta atgtcggtga aagtaactga cagtagcctt tatctgtcga aacaatcgtt
    18601 gcctgatgcc cggcctgtgt cactttgacc gccagcgtgg cggctaagtc atcggcttcg
    18661 ttgccgctgg ctgaccagca cgggacgccg cgttgctcaa aggcggcgcg taatgcaggc
    18721 atctcgtcgt gcaactcttc cggcattggc ggtcgacccg ctttgtaatc tggtaaacgc
    18781 tgatgacgcc agccgctact gcggttttca tcatcaaaaa cggcgaccgc gtgggttggc
    18841 tggctgtgca taatgagctg atcgagcgca tgctggcagg tttcgacaca gggcgaaccc
    18901 tgaacggcat gaatgcgacg gataagattc agtgcatcga caataagcaa atgaacagcc
    18961 acgataaccc ccttaaagat caggcgataa gggtaacatt cgatgccgga acaggctatg
    19021 gctggttgag aaaacaggaa gaggcctcgc aaaacgaggc ctctgggaga gattaatcgc
    19081 aggcaacgat cttcatcgct aggccgccgc gagaggtttc gcggtacttg gcgttcatgt
    19141 ctttacctgt ttcgtacatg gtttcgataa ctttatcgag gcagacgcgc ggttcgctgg
    19201 tacggcgcag tgccatacgc gcggcgttca ccgctttcac tgctgcaatg gcgttacgct
    19261 caatgcacgg tacctgaacc tgccccgcga ccgggtcaca agtcagaccg aggttgtgct
    19321 ccatcgcgat ttccgctgcg atgcaaacct gcgccgggct tgcgcctaac agttctgcca
    19381 gaccagctgc cgccatagag cacgccacgc caacttcacc ctggcaaccc acttcggcac
    19441 cagaaatcga cgcgttcatc ttataaagag aaccaatggc gctggctacc agcaggtaac
    19501 gagccagtga gttagcgttc acttcgcgga taaacttatc gtagtacgcc agcacagccg
    19561 ggataatccc gcacgcaccg ttagtcggcg cagtcaccac gcgaccgcca gcagcgttct
    19621 cttcgttcac tgccagtgca aacatgttga tccagtcaac aaccgccatc gggtcagtgg
    19681 tggttttatc ctggctgacc agcatccggc gtagtgccgc agcacggcgt ggaacgcgca
    19741 gtttgccagg caacacgcct tcggtggaaa taccgcgctc aataccgcca cgcatgactt
    19801 cccagacgtt cgccaggtgc tgttccagct cttctttgct gtgcagcgcc agctcgtttt
    19861 tcatcatcag gccagagagt gacagcccgg tttcctgaca atgtttttgc agatcggctg
    19921 ctgaactgta cggataagga acttcaaccg gtgcgctatc ctgctggcca aaatgttctt
    19981 catcaacgat aaagccaccg ccgatagagt agtaagtctg gctgtaaacg actttatcgc
    20041 ccgccagtgc ggtaatgcgc ataccgtttt catgcagaga aaggttgtcg gcatggaagt
    20101 tcatgcactg atcaaccggg aactccactt catgctgacc atttgccagc atcaggcgac
    20161 catgagtatt cacatcctga ataaaaccag ggatggaatc gatatccacg gtatccggca
    20221 ggttacccgc caggcccata ataatggcga tatcagtgtg gtggccttta ccagtcagag
    20281 agagcgagcc gtacacgtca accaccacgc gggtcacgtc tttaagcagg ttacgggcaa
    20341 tcagatcgtc ggtaaattgt ttacccgctt tcattggtcc aacggtatga gaactggaag
    20401 ggccaatgcc gattttgaaa atatcgaata cgctaatcat aggaaataca tcgcgttaaa
    20461 acggaggaag cgccgcccga aagcggcgcg aaaggactta gctgaacaga gagtagaaga
    20521 ttgcggagat tgcaatcaga cccatcacga caacgaatac gttgctgatg tgaccgctgt
    20581 acttacgcat tgccggtact ttctggattg cgtacatcgg catcaggaac aggatcatcg
    20641 cgatgattgg gccacccagg gtttcaatca tacccaggat gctcgggttc agggtggcaa
    20701 caatccaggt cgttaccagc atgaacagcg cagtgatacg gttcagcttg ttgatttcga
    20761 tagacttacc tttaccacgc agagatttaa tcaccatacc gttgaagcct tcacgtgcgc
    20821 ccaggtagtg gccgaggaag gatttggtga tagcgataat cgcgataatc ggagccatcc
    20881 acgcgataac cggtgcgtta aagtggttag ccaggtaaga cagaatcgag atgttctgct
    20941 ctttagccgc agccaggtct gccggagaca ggctcagtac gcagctgaaa acgaagaaca
    21001 ttacggtcag caccatcatg atgtgagcga atgctaggat cttcgagcat ttctgttctg
    21061 ccatatcgcc gtactcttca cgcttcgcaa cggcgaaaga agagatgatc ggagagtggt
    21121 tgaacgagaa caccattacc ggaattgcca gccacagggt catccacaga ccgtttccgg
    21181 ttgcagatgc agtgtccaga gacagcgttt ccagtgctgc gccgttccac tgcgggatca
    21241 ggtacagagc cagcagcatc agtacgccaa caaacgggaa taccagaata ctcatcgctt
    21301 taacgatcat ctgctcacca aagcgaacga tggtcatcat acccacgatc aggatcagcg
    21361 acagaatcgc acgcggcggt ggcgtcatac ccagctggtg agacatgaag ctttcaactg
    21421 tattggtgat tgccacgcta taaaccagca ggatcgggta gatagcgaag aagtagagca
    21481 gggtaatcag tttacctgcg ccaataccaa agtgttcttc tacaacctcg gtgatgtctt
    21541 cgcccgggtt tttaccagac agtacgaagc gagtcaggcc gcggtgagca aaaaacgtca
    21601 tcgggaacgc aaggatagcc atgatgatca gcgggatcat accgccaaca ccggcgttga
    21661 ttggcaggaa cagcacgccc gcgccgattg ccgtgccgta aaggcccagc atccacatgg
    21721 tgtctgtctt gcgccaggca ctacgagagt ctttcgacgc aatcgtgctg gtttgagtcg
    21781 tttccatcta tttctcctgg aggaatgcaa ataattcagc ttttagccag ttcagcccgg
    21841 gaaggtgcct gaccgtaaaa atgaaatctg tctatcggcg atggcttaat catttaccgc
    21901 cgtaataatt tgagggcgga aagatacaca caagttatgt atctatcagt gatcttgatc
    21961 ccaaatacaa taatctactt ggaagataga ttatcccaac gctttactct gtaaatcaaa
    22021 agtaaaagag aatttaaggg caatatttac ccattaaacg acatctgact tcttccgggg
    22081 cgcgcaatat atgtaggttg aactgaaaaa atcaatactt ttagttaatc atggcgataa
    22141 tttctttttc atagcgataa aatacggttt atgaaaatag gggaacgttt gcgttgtaat
    22201 ataaattgta tgacatatta actgtgatga tatttgtcgc gtgagggggg taagaaacat
    22261 ttatataaca aatgaaatga gttgatgagt aagtgaccaa aaacgagaaa acccggcaac
    22321 aaacgtcacc gggggagcgg agattacgtg cagatttcgt agcaagggat gtaggctgag
    22381 cctggcaact tcatacgatg ctgggcaaca aaaccctgta gcaggtcgtc catacgacgc
    22441 ataatctctt tatcgccgtt gattttgtaa ggaccaaact cttcaatggc gcgaataccg
    22501 acttctttta cgttacccgc cacaataccg gagaacgcac ggcgcaggtc ggcagccagc
    22561 acttcaacag gttgatccgg gtaaagcttc agattagcca tattctcgtg agacggctca
    22621 aacggcattt gcaaatctgg cgcaatgcgc attgaccagt taaagctgta ggcatcgcct
    22681 gtatcacggc gattttcttt caccagcggc atcgattttt tcatctgacg agcgacttca
    22741 gcggcgtcat caatgatgat gtggtaatgg cggcgcgcgt tttcgcccag cgtatgtaca
    22801 acaaactcgt ccagtacgcg gaagtagtcg gcgctctctt tcgggccggt gaggatcaat
    22861 ggtaaaacct gatctttgtt ggccgggttc attaaaattc ccagcaaata cagcaactct
    22921 tctgccgtac ccacaccgcc agggaagata atgatgccgt gagcgatacg gacaaacgct
    22981 tccagacgtt tttcgatatc cggcatgatg atcaattcgt tgaccagcgg gttaggcggt
    23041 tcagcggcga taatcgacgg ctctgtcata ccaataaaac gactgtcttt gtaacgctgc
    23101 tgcgcgtgtc cgaccgcagc acctttcatc ggcgcttcca tcgctcccgg accacagccg
    23161 gtgcagatat tcagctcacg caggcccagc tggtttccga cgcgacgggc atacaaatac
    23221 tcattttcgt taattgagtg accgccccag cagaccacca tatttggcgc ttcacccaca
    23281 tgcagcgcgc gagcgttacg caagatggaa aagaccaggt tagtgatgtg gacggagttg
    23341 tcgagattca ggttgggaaa acgaacggta ttatggattt gcccgtaaac gaagagaatg
    23401 tctcgcagaa ccgcgaacaa gttggcctgc aaagcgcgaa taattcgccc atcgacaaaa
    23461 gcctcttccg ggggattaat cagttccagc tttacgccgc gttcacggcg caggacgtta
    23521 atatcgaaat tttcaaaacg agacagcaat tctttgctgt tatcggtcaa actaccggag
    23581 ttcagtacgg caagtgaaca gttgcgaaac agttgataga ggtcgctgct ggcggtgcgt
    23641 ttaagcatat ccacttccaa ctgcgacaac atatccatgg agccaagcgg gctaatatgt
    23701 gtaatcaaga aaaactcctt atgggacgaa tatcgtcatt ccctttgatt acaatagccc
    23761 tgcctgatga cctttcacaa ccttctgcgt gaatccagca cgcaaaattg agaaaaaatt
    23821 tattgccgaa ccagtcttgt ggtcgatggg acaaaatcgc tattactgcg ccacgggtta
    23881 atgtccagac cgccacgacg ggtataacgt gcgtaaacgc ttaatttctc tggctggcag
    23941 aagcgtaaca ggtcattaaa gatgcgttcc acgcactgtt cgtggaactc gttgtgatga
    24001 cggaatgaga ccaggtaacg cagcagtttt tctctgtcaa tttggcgtcc acgatactga
    24061 atttggatcg aaccccaatc tggttgatgg gtgatcaggc agtttgattt cagcaggtgg
    24121 ctgacaagcg tctcttccac tactttttca ccactggtgg cattctccag atagtcagta
    24181 gtgaattcat agttatcgat agtgatatcc tggtcatcaa tgcaagtgcc attgaaatga
    24241 cctatcggct ggccttccag ttcatcaaga cgatataacg ccacgctaat cttaccctga
    24301 gcgcaagtgc ttaagtcgcg ctccagcgtc tggcgcacct catcccagtt attaaaacgc
    24361 gtctggttaa aactgttgag atagagctta aaactcttcg actcaatcag atttacgctg
    24421 gtgtaatcaa gttcaacatg accgacagcg acctgcggca aacctttcgc attcagccag
    24481 gaaagttcat acagcgtcca gatatccgta ccgtgaaaag gcaggttatc cgctttcaga
    24541 cccagcgggt cgcgattcag gttgcgtgga acgccttgca gtaggctggc gtcataggta
    24601 tcccggtaat cggttgattt tccaagagtc aggcccgcaa gtgcctgatg gtttgcataa
    24661 gaagacatgt ttcaccgtca taaaccagat aaactaaacg acaagtgtat ctggtttaag
    24721 tgaagagaga aattagtgga cgatttgacc gcacaagccc tgaaagattt tactgtacgc
    24781 tactgcgatg cgtggcatga agagcataaa agcaggccgt taagtgagga actgtacggc
    24841 gttccttcac cgtgcattat ttcaattacc gaagatgccg tatactggca accccagccg
    24901 tttaccgggg aacaaaatgt aaacgcggtt gaacgcgctt ttgatattgt gatacaatcc
    24961 acaattcata ccttttatac gactcagttt gccggggata tgcacgcgca gtttggcgat
    25021 atcaaactga cattgctgca aacctggagt gaagacgact tccgtcgggt gcaggaaaat
    25081 ctgattggtc atctggtgac tcagaaaagg ctaaaactgc cgcccacgct atttatcgcg
    25141 acgctggaag aagagttaga ggtcatctcg gtgtgtaatc tctccggtga agtgtgcaaa
    25201 gagacgctgg gaacacgtaa acggacgcat ttagcctcaa atcttgcgga attccttaat
    25261 caacttaagc ctcttctgta atccaaatac cccatctggt tgtgagagat ctcttacaga
    25321 ctctgtagga gatcgccagg aaataagcga atacttaaaa agataagaat cgttattttc
    25381 atttaaaatc aaaatgttga ttgttaattc ttaactttca tatgaaattt tccttaaggc
    25441 attgtctgta agcgccttgt aagacttcgc gaaaaagacg attctatctt agtcgacagg
    25501 gagtcagaca acgaagtgaa catcaggatg atgacacttc tgcaggacac actaggatgg
    25561 tgtttcaggg aaaggcttct ggatgaagcg aagaggatga cgcaggacgc gttaaaggac
    25621 acctccagca tggagaatga gaaccggtca ggatgattcg gtgggtcagg aaggccaggg
    25681 acacttcagg atgaagtatc acatcggggt ggtgtgagca ggaagcaata gttcagaatg
    25741 aacgattggc cgcaaggcca gaggaaaagt tgtcaaggat gagcagggag caacaaaagt
    25801 agctggaatg ctgcgaaacg aaccgggagc actgtgaata cagtgctccc tttttttatt
    25861 cctgctatcc ttcgcggcag tttttcttat tgaggttgct ttatgaccac tcatgaccgc
    25921 gttcgtctcc agttgcaggc gcttgaagcg ttactgcgtg aacatcagca ctggcgaaac
    25981 gatgaacccc agccgcatca atttaatagt acccaaccgt tctttatgga caccatggaa
    26041 ccactggagt ggttgcagtg ggtgctgatc ccgcgaatgc acgatttgtt aaataacaac
    26101 cagccgttac cgggcgcttt tgctgttgca ccctattatg aaatggcgct ggcgacggac
    26161 catccgcaac gcgcgcttat tctggctgag ttggaaaaac tggatgctct ttttgcggat
    26221 gatgcgagct aatgctggaa atactctatc aggatgaatg gctggttgcg gtaaataaac
    26281 cctccggctg gctggttcac cgtagctggc tggatcgcga cgagaaagta gtggtcatgc
    26341 aaaccgtgcg tgaccagata ggacagtatg tttttactgc tcatcgtctg gaccgaccca
    26401 cttctggtgt gttgttgatg ggattatcca gcgaggccgg acggctgctg gcacaacagt
    26461 ttgaacagca ccaaatccag aaacgttacc atgcgattgt gcgcggctgg ttgatggaag
    26521 aagcggtgct ggattatcca ctggtggaag aactggacaa aatcgctgat aaatttgccc
    26581 gcgaagataa aggcccgcag ccagcagtga cgcattatcg cggtctggcg accgtagaaa
    26641 tgccggtagc gaccggacgt tacccgacca cgcgctacag cctggtggaa ctggagccga
    26701 aaaccggacg caaacatcag cttcgccgac atcttgccca tttgcgtcat ccgattattg
    26761 gcgatagcaa acatggcgat ttacgccaga atcgcagcgg tgctgagcat tttggcctcc
    26821 agcggttaat gctacatgcc agtcagttgt cattgacgca tccttttact ggcgagccgc
    26881 tgactattca cgcgggcctg gacgacacct ggatgcaggc gttatcacaa tttggctggc
    26941 gcggtctgct tcctgaaaat gaaagggttg agttcagtgc gccatcgggt caggatggag
    27001 agataagttc ctaatccagg gagaaaacgg tatggcggaa attggtattt ttgtcggcac
    27061 catgtacgga aattcgctgt tagtggcgga agaagcagaa gcaattctga ccgcacaggg
    27121 ccacaaagca acggtatttg aagatcctga attaagcgac tggctgccct atcaggataa
    27181 gtatgttctg gtggttacgt ccacgaccgg gcagggcgac cttcctgata gcattgtgcc
    27241 gctctttcag ggaatcaaag atagtctggg cttccagccg aatctgcgtt atggcgtgat
    27301 tgcgctcggc gacagcagtt atgtaaattt ctgcaatggc ggcaaacagt tcgatgcctt
    27361 gttgcaggaa cagagcgctc agcgggttgg cgaaatgctg ctgattgacg ccagtgagaa
    27421 cccggaaccg gaaacggaat caaatccgtg ggtcgaacag tggggcacgc tgttgtcctg
    27481 atatgttcag cgagcggtaa atgtcgtttt agcggtgctg aatcgaatct tttcaggcaa
    27541 atgccagtaa aaactgcttc atagcgcgga tttttactgg cgtttgcctg gagtcaagcg
    27601 atccatttca tactcttctt tatttcttcg ttttaaccct tcctttcttg ttcttgtttt
    27661 catttccgtg aagtggattc caccgtccag ggctaatgcc aaaatcgggc ctcattgaac
    27721 gcattaatgt tgtgttgttg cacggtgagc cgctatggcg cgctttttat actgctattg
    27781 ccagatataa acacgcgccg tattcggcga acgacctata aaaacggcaa aaaacaccct
    27841 acgttacctc tgatttcctg gcgatgtcgc agtccagagt gagtgtggct aacgcgaatt
    27901 ttcaggagtg caacaatgag ttctttaagt caggctgcga gcagtgtgga aaaacgcacg
    27961 aatgctcgtt actggatagt ggtgatgttg tttatcgtca catccttcaa ctacggcgac
    28021 cgcgctacgc tttctattgc cggttcggaa atggccaaag atatcggcct tgatcccgtg
    28081 ggaatgggct atgtgttctc tgccttctca tgggcttatg ttatcggaca gatccctggt
    28141 ggttggttgc tggatcgttt tggttcaaaa cgcgtctact tctggtcgat ctttatctgg
    28201 tcgatgttta ccttgctgca aggcttcgtc gatatcttta gtggattcgg cattatcgtt
    28261 gccctgttta ctctgcgctt cctggtcggg cttgctgaag cgccatcttt ccccggcaac
    28321 agtcgcattg ttgcggcctg gtttccggcg caggaaaggg gaacagcggt gtcgattttt
    28381 aactccgctc aatacttcgc aacggtgatc ttcgcgccga ttatgggctg gctgacgcat
    28441 gaagtgggct ggtcacacgt cttcttcttt atgggcggtc tgggcattgt catcagcttt
    28501 atctggttga aagtcatcca cgagccaaat caacatccgg gggtaaatca gaaagagctg
    28561 gagtacatcg ccgcgggtgg cgcgctgatc aatatggatc agcaaaacac caaagttaaa
    28621 gtgccgttca gcgtgaagtg ggggcagatc aaacaactgc tcgggtcacg gatgatgatc
    28681 ggcgtttata ttggtcagta ctgtatcaac gccctgactt actttttcat tacctggttc
    28741 ccggtttatc tggtgcaggc gcgtgggatg tcgattctga aagcgggctt tgtggcttcc
    28801 gttccggcgg tttgcggttt tatcggcggt gtgctgggtg ggattatttc cgactggctg
    28861 atgcgccgca cgggatcgct gaacattgcg cgtaaaacac cgatcgtaat gggcatgttg
    28921 ctgtcgatgg tgatggtgtt ctgcaactac gtcaacgttg agtggatgat catcggcttt
    28981 atggcgctgg cctttttcgg taagggcatc ggggcgctgg gttgggcagt aatggcagat
    29041 accgcgccaa aagagatcag cggtctttca ggtggcctgt tcaacatgtt cggtaacatt
    29101 tctggcatcg tcacgccaat cgcaattggt tatatcgttg gcacgactgg ctcgtttaat
    29161 ggggcgctga tttatgttgg tgttcatgcc ttaatcagcg gtactgagct acctggtgct
    29221 ggtgggcgat atcaagcgta tcgagctgaa acctgtcgcg gggcaataag atggcgacac
    29281 aatccagtcc tgttattact gatatgaaag tcattccggt cgccggacat gacagcatgt
    29341 tgcttaatat tggtggtgca cataacgcat acttcacccg caatatcgtg gtactcaccg
    29401 ataatgccgg gcataccggc attggtgaag cgccgggcgg agaggtgatt tatcaaacac
    29461 tggtcgatgc tattccgatg gtgttgggcc aggaagttgc gcgactgaat aaagtggtcc
    29521 agcaggtgca taaaggtaat caggccgccg attttgatac cttcggtaaa ggggcctgga
    29581 cctttgaatt acgcgttaac gccgtggcgg cgctggaagc cgccttgctt gacctgctag
    29641 gtaaggcgct gaatgttccg gtctgcgaac tgttagggcc aggcaagcaa cgcgatgcta
    29701 tcaccgtcct cggttatctg ttttatatcg gtgatcggac caaaaccgat cttccttatc
    29761 tggaaaaaac gccgggcaac catgagtggt atcagttgcg gcatcagaaa gcgatgaaca
    29821 gcgaagccgt tgtgcgtctg gcggaagcct cacaggatcg ttatggcttt aaagatttca
    29881 aacttaaagg cggcgtgtta cctggcgagc aagaaatcga cactgttcgt gcattgaaga
    29941 aacgcttccc tgatgcgcgg attaccgttg atcccaacgg tgcctggcta cttgatgaag
    30001 ctatttctct atgcaaaggg ctgaatgatg ttcttaccta tgccgaagaa ccatgcggcg
    30061 cagaacaggg tttctccggt cgtgaagtta tggcggagtt tcggcgggcg accggcttgc
    30121 ccgtcgcgac taacatgatc gccaccgact ggcggcagat gggccatacg ctctccctgc
    30181 aatccgttga tatcccgctg gcggatccgc atttctggac gatgcaagat tcggtacgtg
    30241 tggcgcaaat gtgccatgaa tttggcctga cctggggttc acactcaaac aaccacttcg
    30301 atatttccct ggcgatgttt acccatgttg ccgccgctgc accgggtaaa atcaccgcga
    30361 ttgatacgca ctggatttgg caggaaggca atcagagctt gaccaaagaa ccgtttgaga
    30421 tcaaaggcgg tctggttcag gtgccggaaa aaccggggct gggtgtagaa atcgatatgg
    30481 atcaagtgat gaaagcccat gagctgtatc agaaacacgg gcttggcgcg cgtggcgatg
    30541 cgatgggaat gcagtatctg attcctggct ggacgttcga taacaagcgc ccgtgcatgg
    30601 tgcgttaaga cagaaaacca aaaccggctc tatctggagc cggtttgaga ctgatgctaa
    30661 acgcaaaata gcctgttgtg ctatgtatca ggtctacatc attttttaat tcattgaatt
    30721 taattggttt tgtaggccgg ataaggcgtt aacgccgcat ccggcataaa cacaggcact
    30781 ttgtcaccaa tctgaaacca gcgtcataaa aagccgattg ctactcgaca agacgtccgt
    30841 tacccgagaa ttttgctggc ttcgcgcgcg acattatcca tctcgtccaa cagttccagc
    30901 agctccggct ccaaatcttc ttctttagta ccgctacgta gctgttgttc gatcagttgg
    30961 cagagattct tcatacgcgg cacaccgcta tagccgcaac tgccatgcag tttatgaatc
    31021 aaatcaacca ggccttccgg gttttctcca accagctgtt cctcaacttt gttgcgaact
    31081 tcaggcagga aatcgagtaa tatttgcagc atatcgcgcg ctaaatcggt ttttcctgct
    31141 gcttggcgta gtgccagttg ccagtcgagg gtcgcattcg ggttcaccac aatttcgttg
    31201 acttcgggcg tcacgacgcg agacgaaata ccgctgccag gcttgtagcg caacaacaaa
    31261 ttatgcaatc gctcttcttc aatcggtttc gccagataat cgctcatccc tgcgccaagc
    31321 agcttctctt tttgcccggc cattgcatgc gccgttaccg cgataaccgg cgtttgttgc
    31381 tgatgcggga gttggtggat gagttcgcag gcccgaatgc catccatgtc aggcatttga
    31441 atatccatta agatcaaatc gaacggcatc tgtttcgccc gttcaaccgc ctgatgcccg
    31501 ctatcgcaaa gttccacatg ttgcaccata tcttccagca atgcgccgat aagtttcagg
    31561 ttagcggggt tgtcatcaac cgccatgact gtcattgcca gcttactttc atcggttaca
    31621 ggcaaaagcg tgttttgttt gtgatgacaa aattccgtca gggcaggcaa caggcgcgta
    31681 ggtgttaatg gtttcagcag acacgcgccg ataccatctt gcttgagttt ttcagcattg
    31741 acttgtgcat ggcaaggaag tgccagcatc aggaaatcgg tcatcgatac cgctttcgct
    31801 aatcgctcat gttgcattgt taacggctcg cggaaggtca ccgcgatgcc taacaacatc
    31861 atgtcgtaat gcgcgggagg cagcgcggag aacgttgggc tataaaccac ttccagcggc
    31921 gtttcactta aaatatccag cgtgcattgc gctgctgcgg agtttggttc gacataggcc
    31981 aggcgtttac cggcgaggca ctgggtggat ggcccttcaa taataatgtt cgggttcaga
    32041 tcgagattaa tgtggaacca gaaagttgaa ccgcgattcg gctggctatg gaacgaaata
    32101 tcgccgccca tttcattaac cagtttttgt gtaatcacca gccccagccc ggtgccacca
    32161 tgacggcggg aaatactggc atcagcctgt cggaaggcct ggaataagcg cgattgatcg
    32221 cgttcaggaa taccaatgcc ggtatcccga atctgcactt caatctgcac tttggtatta
    32281 ctcagcgcac gtttttctac cagaatatca atgttgccat tctcggtgaa tttaattgca
    32341 ttccccacca ggttagtgat gatttgctgt aatcgcagtg ggtcgccgat cacgttatca
    32401 ggcacgtcgc ttttaatatt gagcgtcagt tccaaccctt tatcgtgaga agaatgtgcc
    32461 agcagagtaa cgacttcatc cagcgtgctg cgtagtggga atggaatact ttccagaatc
    32521 agcttacctg cttccagttt cgagaagtcg agaacatcat taataattgc cagcaaatta
    32581 tttgccgaac gttcaatcgt attcaggtga tcgcgctgcg ttggtgttaa ttctgttttc
    32641 agcgtcaggc gggtaaagcc aataacacca ttcagtggtg tacgcagctc gtgtgacata
    32701 tttgccagaa actcggattt aatacgcgcc gcttcctggg cgcgcttttt cgccagatcc
    32761 aactcaacgt tctgaatttc catctgctcc agcgtttcac gcagatcgga cgtcgcctgg
    32821 tcgatattgt gctgcatctc ttcgtgataa gcagccagcg acattgccat cgagttgata
    32881 ccgtttttca gcatatccag ctcgccgagc ataaatcctt ccacccggct gtcgagttgc
    32941 ccgcgacgga tgcggtcgac ggtattcacc atattgcgaa tcggaccggt tacatcgcgc
    33001 attaagcgcc agccaaaaat aagcgcaata ccgatacaaa acagcatcat cacgctggaa
    33061 ataaagatct ctttatattg ctgcaagcga accgatttaa gatccagctc aagcgcaata
    33121 tatcccaaca tattttgact atttttggca tcgctactgg gcgattcgtc gggggagtaa
    33181 ctctcagaaa taatcggcgt gcggaggatc ataatatcgc cgtcacgagt gacagtgagc
    33241 tggcgaggaa acggcacatt gctgccgagc tgcattgatg agggatcaag atgaaaattg
    33301 gaggtgacaa agagtcggtt attttcatca taaaccgaaa tcgcgcgaac aatatcggaa
    33361 tggcgacgat gcagtacgct tattaactga ccgatagatt cgcgattttg caggctcatg
    33421 ccatattcag tagaaactgc aagcggctca ataatgctgg caccggcatc ttccagttga
    33481 cgctgcaagt cgttatagcg atgcacgacg aaaaagatac tcagcaataa accaataagg
    33541 acggtcggtg ccaggatcag aatcatcatg cgtgcgcgca ggctgtagtt ggtcatggag
    33601 ttccgttatg ggacaattaa ggtcacactg ttaaattgag aaagtctcgc caatggcgca
    33661 attctactct gcaaaacgac gcacgacgac gcgtcagatc ataaccgttt cagtcaacga
    33721 cctcgactct tttggtcagg gcgtggcgcg acataacggc aaaacgctat ttatccccgg
    33781 attattgccg caggaaaacg cggaagttac tgttactgaa gataaaaaac agtatgcccg
    33841 cgctaaagtc gtacgccggt taagcgatag cccggaacgc gaaacgccac gctgtcctca
    33901 ttttggcgta tgcggcggct gtcagcaaca acacgccagc gtggatttac agcagcgaag
    33961 caaaagtgcg gcactcgccc gattaatgaa acacgaagtc tctgaagtga tcgccgatgt
    34021 tccctggggc tatcgccgtc gcgcgcgttt aagtctgaac tacttaccga aaacacagca
    34081 acttcagatg gggtttcgca aagcgggctc cagtgacatt gtcgacgtta aacaatgtcc
    34141 cattttagtg ccccaacttg aagcattgct gcccaaagtc agggcatgcc tgggcagctt
    34201 acaagctatg cgccatcttg gtcatgttga actggtacag gcaaccagcg gcacgctgat
    34261 gattttgcgc cataccgcac cgctaagttc ggcagatcgc gaaaaactgg aacgcttttc
    34321 gcattctgaa ggcctggatc tgtatctcgc ccccgatagt gagatactcg aaaccgtctc
    34381 tggtgagatg ccctggtatg actcaaacgg gttgcgctta acttttagcc cgcgcgattt
    34441 tattcaggtc aatgcgggtg tgaaccaaaa aatggtagcg cgtgcgttgg aatggctgga
    34501 tgtgcaacct gaagatcgcg tactggatct gttctgcggt atgggcaact ttacactgcc
    34561 attggcgaca caagcagcca gtgtggtaag tgtagaaggt gttccggcgc tggtggaaaa
    34621 aggccagcag aatgcgcgtc ttaatggctt acagaatgtg acgttttatc atgaaaatct
    34681 tgaagaagat gtcacaaacc agccgtgggc gaaaaacggc ttcgataaag tgttgctgga
    34741 ccccgcgcga gcaggtgccg caggtgttat gcagcaaatt ataaaactgg aacctattcg
    34801 tatagtttat gtatcctgta accctgcaac gctggctcgg gatagcgaag cgttattaaa
    34861 agcaggatat accattgcgc gactggcgat gctggatatg ttcccacaca cgggacatct
    34921 ggaatcgatg gtacttttct cgcgcgttaa atagttgcga tttgccgatt tcggcaggtc
    34981 tggtccctaa aggagaggac gatggttgcg gtaagaagtg cacatatcaa taaggctggt
    35041 gaatttgatc cggaaaaatg gatcgcaagt ctgggtatta ccagccagaa gtcgtgtgag
    35101 tgcttagccg aaacctgggc gtattgtctg caacagacgc aggggcatcc ggatgccagt
    35161 ctgttattgt ggcgtggtgt tgagatggtg gagatcctct cgacattaag tatggacatt
    35221 gacacgctgc gggcggcgct gcttttccct ctggcggatg ccaacgtagt cagcgaagat
    35281 gtgctgcgtg agagcgtcgg taagtcggtc gttaacctta ttcacggcgt gcgtgatatg
    35341 gcggcgatcc gccagctgaa agcgacgcac actgattctg tttcctccga acaggtcgat
    35401 aacgttcgcc ggatgttatt ggcgatggtc gatgattttc gctgcgtggt catcaaactg
    35461 gcggagcgta ttgctcatct gcgggaagta aaagatgcgc cggaagatga acgcgtactg
    35521 gcggcaaaag agtgcaccaa tatctacgcg ccgttggcaa accgtcttgg gattgggcaa
    35581 ctgaaatggg agctggaaga ttactgcttc cgttatctcc acccgaccga atacaaacgc
    35641 atcgcaaaac tgttgcatga acgccgtctc gaccgcgaac actatatcga agagtttgtc
    35701 ggtcatctgc gcgctgagat gaaagctgaa ggcgttaaag ctgaagtgta tggtcgtccg
    35761 aaacacatct acagcatctg gcgcaaaatg cagaaaaaga acctcgcctt cgatgagctg
    35821 tttgatgtgc gtgcggtacg tattgtcgcc gagcgtttac aggattgtta tgccgcactg
    35881 gggatagtgc acactcacta tcgccacctg ccggatgagt ttgacgatta cgtcgctaac
    35941 ccgaaaccaa acggttatca gtctattcat accgtggttc tggggccggg tggaaaaacc
    36001 gttgagatcc aaatccgcac caaacagatg catgaagatg cagagttggg tgttgctgcg
    36061 cactggaaat ataaagaggg cgcggcagct ggcggcgcac gttcgggaca tgaagaccgg
    36121 attgcctggc tgcgtaaact gattgcgtgg caggaagaga tggctgattc cggcgaaatg
    36181 ctcgacgaag tacgtagcca ggtctttgac gaccgggtgt acgtctttac gccgaaaggt
    36241 gatgtcgttg atttgcctgc gggatcaaca ccgctggact tcgcttacca catccacagt
    36301 gatgtcggac accgctgcat cggggcaaaa attggcgggc gcattgtgcc gttcacctac
    36361 cagctgcaga tgggcgacca gattgaaatt atcacccaga aacagccgaa ccccagccgt
    36421 gactggttaa acccaaacct cggttacgtc acaaccagcc gtgggcgttc gaaaattcac
    36481 gcctggttcc gtaaacagga ccgtgacaaa aacattctgg ctgggcggca aatccttgac
    36541 gacgagctgg aacatctggg gatcagcctg aaagaagcag aaaaacatct gctgccgcgt
    36601 tacaacttca atgatgtcga cgagttgctg gcggcaattg gtggcgggga tatccgtctc
    36661 aatcagatgg tgaacttcct gcaatcgcaa tttaataagc cgagtgccga agagcaggat
    36721 gcagccgcgt tgaaacagct tcagcaaaaa agctacacac cgcaaaaccg cagtaaagat
    36781 aacggtcgcg tggtagtcga aggtgttggc aacctgatgc accacatcgc gcgttgctgc
    36841 cagccgattc ctggagatga gattgtcggc ttcataaccc aggggcgcgg tatttcagta
    36901 caccgcgccg attgcgaaca actggcggaa ctgcgctccc atgcgccaga acgcattgtt
    36961 gacgcggtat ggggtgagag ctactccgcc ggatattcgc tggtggtccg cgtggtggct
    37021 aatgatcgta gtgggttgtt acgtgatatc acgaccattc tcgccaacga gaaggtgaac
    37081 gtgcttggcg ttgccagccg tagcgacacc aaacagcaac tggcgaccat cgacatgacc
    37141 attgagattt acaacctgca agtgctgggg cgcgtgctgg gtaaactcaa ccaggtgccg
    37201 gatgttatcg acgcgcgtcg gttgcacggg agttaggccg aaatttgctc gtatctacaa
    37261 tgtagattga tatatactat atctacatat gatagcggtt tgaggaaagg gttatgatcc
    37321 acagtagcgt aaagcgttgg ggaaattcac cggcggtgcg gatcccggct acgttaatgc
    37381 aggcgctcaa tctgaatatt gatgatgaag tgaagattga cctggtggat ggcaaattaa
    37441 ttattgagcc agtgcgtaaa gagcccgtat ttacgcttgc tgaactggtc aacgacatca
    37501 cgccggaaaa cctccacgag aatatcgact ggggagagcc gaaagataag gaagtctggt
    37561 aatggtaagc cgatacgtac ccgatatggg cgatctgatt tgggttgatt ttgacccgac
    37621 aaaaggtagc gagcaagctg gacatcgtcc agctgttgtc ctgagtcctt tcatgtacaa
    37681 caacaaaaca ggtatgtgtc tgtgtgttcc ttgtacaacg caatcaaaag gatatccgtt
    37741 cgaagttgtt ttatccggtc aggaacgtga tggcgtagcg ttagctgatc aggtaaaaag
    37801 tatcgcctgg cgggcaagag gagcaacgaa gaaaggaaca gttgccccag aggaattaca
    37861 actcattaaa gccaaaatta acgtactgat tgggtagtgt tactaactca cttctattct
    37921 ggtcacaggt ttcttcctga cagacctgca attttcagga cattctaatg aatcaaatcg
    37981 accgtttgct aactattatg cagcgcctgc gcgatccgga aaacggctgc ccgtgggata
    38041 aagagcagac atttgccacc attgcgcctt acacccttga agaaacctac gaagtgctgg
    38101 atgccatcgc ccgtgaagat tttgacgatc ttcgcggtga actgggcgat ctgctattcc
    38161 aggtggtgtt ttacgcgcaa atggctcagg aagaagggcg ctttgatttt aatgatattt
    38221 gcgctgctat tagcgataaa ttagagcgtc gccatccgca tatttttgct gatagttctg
    38281 ccgaaaacag tagtgaagtg cttgcccgtt gggagcaaat caaaaccgaa gagcgcgcgc
    38341 agaaagcgca gcattcggcg ctggacgata ttcctcgtag tttaccggct ttaatgcggg
    38401 cgcaaaaaat ccagaaacgt tgcgccaacg ttggcttcga ctggacgacg cttggcccag
    38461 tggttgataa agtctacgaa gagatcgacg aggtgatgta cgaggcacgg caggctgtta
    38521 tcgaccaggc taaactggag gaggaaatgg gtgacctgct gtttgccacg gtcaatctgg
    38581 ctcgtcattt agggacaaaa gcggaaatcg cattgcaaaa agcgaacgaa aaattcgagc
    38641 gtcgttttcg cgaagtggag cgtattgttg ccgcgcgtgg actggaaatg acaggtgttg
    38701 acctggaaac aatggaagaa gtctggcaac aggtaaaacg gcaggaaatt gatctctaag
    38761 ggaattacgt ggtcaagcgc catttgtgtc atttttttaa tgacaagcgc ttgatttgcg
    38821 tcaaaaacat ttaccccaaa ggggctattt tctcactcct gatttcaata gtgcgctggc
    38881 gaagaggagg gataatgaaa gtttgtggca caggtcatgt tcgggtatac tgctttcccg
    38941 tcctggttat tccatcgtct tttcaaccta acttctcagg ttcagcatga caacgaacta
    39001 tatttttgtg accggcgggg tcgtatcctc tctgggtaaa ggcattgccg cagcctccct
    39061 cgcagccatt cttgaagccc gtggcctcaa tgtgaccatc atgaaactgg atccgtacat
    39121 caacgtcgat ccaggtacta tgagcccaat ccaacacggg gaagtgttcg ttactgaaga
    39181 cggcgctgaa accgacctgg acctggggca ctacgagcgt ttcattcgta ccaaaatgag
    39241 ccgccgcaac aacttcacca cgggtcgtat ctactctgac gttctgcgta aagaacgccg
    39301 cggcgactac ctcggcgcaa ccgtgcaggt tattccgcac atcactaacg caatcaaaga
    39361 gcgcgtgctg gaaggtggcg aaggtcatga cgtagtactg gtagaaatcg gcggtacagt
    39421 aggtgatatc gaatccctgc cgttcctcga agcgattcgc cagatggctg ttgaaattgg
    39481 ccgtgagcac actctgttta tgcacctgac gctggtgccg tacatggcag cgtctggtga
    39541 agtcaaaacc aaaccgactc agcactctgt aaaagagctg ctctccatcg gtatccagcc
    39601 tgacatcctg atttgtcgtt cagatcgcgc tgttccggcg aacgaacgtg cgaagattgc
    39661 attgttctgt aatgttccgg aaaaagcggt tatttctctg aaagacgtcg attccatcta
    39721 taaaattccg ggcctgttga aatctcaggg gctggacgat tatatttgta aacgattcag
    39781 cttaaactgc ccggaagcga atctgtccga atgggaacag gttatcttcg aagaagcgaa
    39841 cccggtaagt gaagtcacca tcggtatggt cggcaagtac attgaactgc cggatgctta
    39901 taaatcagtg atcgaagcac tgaaacacgg tgggctgaag aatcgtgtca gcgtcaacat
    39961 caaactgatc gattcacaag atgttgaaac gcgcggcgtt gaaatcctta aaggtctgga
    40021 cgcaatcctc gtacctggcg gtttcggcta tcgtggcgta gaaggcatga ttacgaccgc
    40081 gcgttttgcg cgtgagaaca atattcctta tctgggcatt tgcctgggta tgcaggtggc
    40141 gttaattgat tacgctcgcc atgttgccaa catggagaac gccaactcta cggaatttgt
    40201 gccagactgt aagtacccgg ttgtggcgct gattaccgag tggcgcgatg aaaacggcaa
    40261 cgttgaagtt cgtagcgaga agagcgatct cggcggtacc atgcgtctcg gcgcacagca
    40321 gtgccagttg gttgacgata gcctggttcg ccagctgtac aatgcgccga caattgttga
    40381 gcgtcatcgt caccgttacg aagtcaacaa catgctgttg aaacagattg aagatgcagg
    40441 tctgcgcgtt gcgggccgtt ccggggatga tcagttggtc gagatcatcg aagttccgaa
    40501 tcacccgtgg ttcgtggctt gccagttcca tccggagttt acttctactc cacgtgatgg
    40561 tcacccgctg tttgcaggct ttgtgaaagc cgccagcgag ttccagaaac gtcaggcgaa
    40621 gtaagtaaaa aagttagaac ggcaacgcgt accttgggta cgcgttgttt gtctggagtt
    40681 tcagtttaac tagtgacttg aggaaaacct aatgtccaaa atcgtaaaaa tcatcggtcg
    40741 tgaaatcatc gactcccgtg gtaacccgac tgttgaagcc gaagtacatc tggagggtgg
    40801 tttcgtcggt atggcagctg ctccgtcagg tgcttctact ggttcccgtg aagctctgga
    40861 actgcgcgat ggcgacaaat cccgtttcct gggtaaaggc gtaaccaaag ctgttgctgc
    40921 ggtaaacggc ccaatcgctc aggcgctgat tggcaaagat gctaaagatc aggctggcat
    40981 tgacaagatc atgatcgacc tggacggcac cgaaaacaaa tccaaattcg gcgcgaacgc
    41041 aatcctggct gtatctctgg ctaacgccaa agctgctgca gctgctaaag gtatgccgct
    41101 gtacgagcac atcgccgaac tgaacggcac tccgggcaaa tactccatgc cggttccgat
    41161 gatgaacatc atcaacggtg gtgagcacgc tgacaacaac gttgatatcc aggaattcat
    41221 gattcagccg gttggcgcga aaactgtgaa agaagccatc cgcatgggtt ctgaagtttt
    41281 ccatcacctg gcaaaagttc tgaaagcgaa aggcatgaac actgcagttg gtgacgaagg
    41341 tggctatgcg ccgaacctag gttccaacgc tgaagctttg gctgttatcg ctgaagctgt
    41401 taaagctgct ggttatgaac tgggcaaaga catcactctg gcgatggact gcgcagcttc
    41461 tgaattctac aaagatggta aatacgttct ggctggcgaa ggcaacaaag cgttcacctc
    41521 tgaagaattc actcacttcc tggaagaact gaccaaacag tatccgatcg tatctatcga
    41581 agacggtctg gacgaatctg actgggacgg tttcgcatac cagaccaaag ttctgggcga
    41641 caaaatccag ctggttggtg acgacctgtt cgtaaccaac accaagatcc tgaaagaagg
    41701 tatcgaaaaa ggtatcgcta actccatcct gatcaaattc aaccagatcg gttctctgac
    41761 cgaaactctg gctgcaatca agatggcgaa agacgctggc tacactgcag ttatctctca
    41821 ccgttctggc gaaactgaag acgctaccat cgctgacctg gctgttggta ctgctgcagg
    41881 ccagatcaaa actggttcta tgagccgttc tgaccgtgtt gctaaataca accagctgat
    41941 tcgtatcgaa gaagctctgg gcgaaaaagc accgtacaac ggtcgtaaag agatcaaagg
    42001 ccaggcataa gtctgacttt atctgatttg ataatgccag ccctcgggct ggcatttttt
    42061 atggtggagt taccagcggc cggatgcgcc gcccccgccg ctaaatccgc cgccacttga
    42121 gcctccaccg gaaccgctgt tgtctgaatg ataacttcta cctgatgctc ttttctgaag
    42181 tacacataaa caggtaaaga ccataaatat ggtgaaagta aaaaagaagg aaaatacagc
    42241 aatggaaaaa gttttatcag agaacaggaa taaatctaaa agatagattg ctgaaataca
    42301 gactccactt ttacatgcgc gacaaaaatt actgccttga tgaaaaaacc agaaagggaa
    42361 gaacatcact gcaaataccc aaaaaatagc aaagtaataa tgatcagtgg aagacgttga
    42421 ttcactttct gaaggattag ccggatattg gtgttgtgaa gtgagttggt tattcaaagc
    42481 gattatagct aactctaatc cctgagctaa tttttgttgt ttaaatgcgg gtatcatgtt
    42541 gctacggatg atatctccag ccagagcatc ggttaccttt tcttccagcc cataacctac
    42601 ctggatgcgg acagtgcgat ccgaccaggc aacaatgatc agtatcccat cattacgttt
    42661 ggcatctcct aaacgccaat tgtcaaaaac tcttgtagca tattgttcaa ttgtctcgtc
    42721 tttggttgtg ggaacaatta atacagcaat ttgcacttgg gtattattga aaatagattc
    42781 taacttgtgc gtcagttctt tcttttcttg tgagtttaa
//
LOCUS       DAJVTL010000022        39154 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.022, whole genome shotgun sequence.
ACCESSION   DAJVTL010000022 DAJVTL010000000
VERSION     DAJVTL010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 39154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39154
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.022"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(158..370)
                     /gene="rpmE"
                     /locus_tag="OQQ26_001115"
     CDS             complement(158..370)
                     /gene="rpmE"
                     /locus_tag="OQQ26_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HCS1856644.1"
                     /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF
                     TGKQRDVATGGRVDRFNKRFNIPGSK"
     gene            573..2771
                     /gene="priA"
                     /locus_tag="OQQ26_001116"
     CDS             573..2771
                     /gene="priA"
                     /locus_tag="OQQ26_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709739.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HCS1856645.1"
                     /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG
                     IVVSVNDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI
                     LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF
                     NDAALQALRKKGLCDLASETPEFSDWRKNYAVSSERLRLNTEQATAVGAIHSAADTFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL
                     DLKGQKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPMFPGVPIS
                     RIDRDTISRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSV
                     DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
                     RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWVLGPVPALAPK
                     RGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRKVKWVLDVDPIEG"
     gene            2927..3952
                     /gene="cytR"
                     /locus_tag="OQQ26_001117"
     CDS             2927..3952
                     /gene="cytR"
                     /locus_tag="OQQ26_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HCS1856646.1"
                     /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV
                     EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI
                     GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
                     LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEIPLCHYRLQGYVQALHRCGIMVD
                     PQYIARGDFTFEAGSKAMQQLLELPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS
                     IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR
                     GSTRALP"
     gene            4044..5003
                     /gene="ftsN"
                     /locus_tag="OQQ26_001118"
     CDS             4044..5003
                     /gene="ftsN"
                     /locus_tag="OQQ26_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HCS1856647.1"
                     /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL
                     VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP
                     SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ
                     QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTT
                     AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK
                     ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG"
     gene            5096..5626
                     /gene="hslV"
                     /locus_tag="OQQ26_001119"
     CDS             5096..5626
                     /gene="hslV"
                     /locus_tag="OQQ26_001119"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HCS1856648.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC
                     IYTNHFHTIEELSYKA"
     gene            5636..6967
                     /gene="hslU"
                     /locus_tag="OQQ26_001120"
     CDS             5636..6967
                     /gene="hslU"
                     /locus_tag="OQQ26_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HCS1856649.1"
                     /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR
                     KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI
                     KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA
                     RRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL"
     gene            7034..7960
                     /gene="menA"
                     /locus_tag="OQQ26_001121"
     CDS             7034..7960
                     /gene="menA"
                     /locus_tag="OQQ26_001121"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HCS1856650.1"
                     /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL
                     VALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIIT
                     VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV
                     FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV
                     RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP
                     VAMRPMLERTVKGALLTNLLFVLGIFLSQWAA"
     gene            8053..8538
                     /gene="rraA"
                     /locus_tag="OQQ26_001122"
     CDS             8053..8538
                     /gene="rraA"
                     /locus_tag="OQQ26_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HCS1856651.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(8623..8868)
                     /gene="zapB"
                     /locus_tag="OQQ26_001123"
     CDS             complement(8623..8868)
                     /gene="zapB"
                     /locus_tag="OQQ26_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HCS1856652.1"
                     /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ
                     NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV"
     gene            9294..10139
                     /gene="glpF"
                     /locus_tag="OQQ26_001124"
     CDS             9294..10139
                     /gene="glpF"
                     /locus_tag="OQQ26_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol uptake facilitator protein GlpF"
                     /protein_id="HCS1856653.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGTFCAAA
                     LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG
                     WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSE
                     QKASL"
     gene            10162..11670
                     /gene="glpK"
                     /locus_tag="OQQ26_001125"
     CDS             10162..11670
                     /gene="glpK"
                     /locus_tag="OQQ26_001125"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HCS1856654.1"
                     /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG
                     WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI
                     VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGE
                     LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEV
                     RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
                     GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA
                     TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV
                     LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
                     AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE"
     gene            11806..12816
                     /gene="glpX"
                     /locus_tag="OQQ26_001126"
     CDS             11806..12816
                     /gene="glpX"
                     /locus_tag="OQQ26_001126"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HCS1856655.1"
                     /translation="MRRELAIEFSLVTESAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDTVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVT
                     ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD
                     NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH
                     IL"
     gene            12913..13659
                     /gene="fpr"
                     /locus_tag="OQQ26_001127"
     CDS             12913..13659
                     /gene="fpr"
                     /locus_tag="OQQ26_001127"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HCS1856656.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID
                     GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALRPGDEVQVVSEAAGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK
                     RYEGKLRIQTVVSRETTAGSLTGRIPALIESGELESAVGLPMNKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(13664..14092)
                     /gene="uspD"
                     /locus_tag="OQQ26_001128"
     CDS             complement(13664..14092)
                     /gene="uspD"
                     /locus_tag="OQQ26_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspD"
                     /protein_id="HCS1856657.1"
                     /translation="MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLS
                     ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE
                     QCDLLVCGHHHSFINRLMPAYRGMINKLSADLLIVPFIDK"
     gene            complement(14119..14418)
                     /locus_tag="OQQ26_001129"
     CDS             complement(14119..14418)
                     /locus_tag="OQQ26_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 domain-containing protein"
                     /protein_id="HCS1856658.1"
                     /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM
                     TKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA"
     gene            complement(14629..15069)
                     /locus_tag="OQQ26_001130"
     CDS             complement(14629..15069)
                     /locus_tag="OQQ26_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCS1856659.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG
                     RFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN"
     gene            15170..15769
                     /locus_tag="OQQ26_001131"
     CDS             15170..15769
                     /locus_tag="OQQ26_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HCS1856660.1"
                     /translation="MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDL
                     SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK
                     SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
                     TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK"
     gene            15877..16644
                     /gene="tpiA"
                     /locus_tag="OQQ26_001132"
     CDS             15877..16644
                     /gene="tpiA"
                     /locus_tag="OQQ26_001132"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HCS1856661.1"
                     /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE
                     MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(16699..17454)
                     /gene="cdh"
                     /locus_tag="OQQ26_001133"
     CDS             complement(16699..17454)
                     /gene="cdh"
                     /locus_tag="OQQ26_001133"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HCS1856662.1"
                     /translation="MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLP
                     NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW
                     LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLAN
                     ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQS
                     DNSFVLLATQRNLLTLNRASAEEIQDHQCEILR"
     gene            complement(17561..18550)
                     /gene="sbp"
                     /locus_tag="OQQ26_001134"
     CDS             complement(17561..18550)
                     /gene="sbp"
                     /locus_tag="OQQ26_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter
                     substrate-binding protein Sbp"
                     /protein_id="HCS1856663.1"
                     /translation="MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQQTGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK
                     NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR"
     gene            complement(18869..19831)
                     /gene="pfkA"
                     /locus_tag="OQQ26_001135"
     CDS             complement(18869..19831)
                     /gene="pfkA"
                     /locus_tag="OQQ26_001135"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014072359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HCS1856664.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
                     HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY"
     gene            complement(20012..20914)
                     /gene="fieF"
                     /locus_tag="OQQ26_001136"
     CDS             complement(20012..20914)
                     /gene="fieF"
                     /locus_tag="OQQ26_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312867.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HCS1856665.1"
                     /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV
                     DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI
                     QHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM
                     NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQALLDRALPDEERQEI
                     IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP
                     GSDVIIHQDPCSVVPREGKRSMLS"
     gene            complement(21062..21562)
                     /gene="cpxP"
                     /locus_tag="OQQ26_001137"
     CDS             complement(21062..21562)
                     /gene="cpxP"
                     /locus_tag="OQQ26_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HCS1856666.1"
                     /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSH
                     MFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKM
                     ANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSFKLLSS
                     SNSRSQ"
     gene            21712..22410
                     /gene="cpxR"
                     /locus_tag="OQQ26_001138"
     CDS             21712..22410
                     /gene="cpxR"
                     /locus_tag="OQQ26_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HCS1856667.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            22407..23780
                     /gene="cpxA"
                     /locus_tag="OQQ26_001139"
     CDS             22407..23780
                     /gene="cpxA"
                     /locus_tag="OQQ26_001139"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HCS1856668.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWGEVLDNAAFEAEQMGKSLTV
                     NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
                     LPLYKRS"
     gene            complement(23886..24560)
                     /gene="yiiM"
                     /locus_tag="OQQ26_001140"
     CDS             complement(23886..24560)
                     /gene="yiiM"
                     /locus_tag="OQQ26_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418346.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HCS1856669.1"
                     /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ
                     AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD
                     IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL
                     ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFS
                     RRLWGK"
     gene            complement(24709..25692)
                     /gene="kdgT"
                     /locus_tag="OQQ26_001141"
     CDS             complement(24709..25692)
                     /gene="kdgT"
                     /locus_tag="OQQ26_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate transporter"
                     /protein_id="HCS1856670.1"
                     /translation="MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMI
                     TGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVE
                     VGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGT
                     AGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTV
                     IAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEM
                     VPAFKPMAPAATSLVAAAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK"
     gene            complement(25953..26573)
                     /gene="sodA"
                     /locus_tag="OQQ26_001142"
     CDS             complement(25953..26573)
                     /gene="sodA"
                     /locus_tag="OQQ26_001142"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HCS1856671.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            26858..27892
                     /gene="rhaT"
                     /locus_tag="OQQ26_001143"
     CDS             26858..27892
                     /gene="rhaT"
                     /locus_tag="OQQ26_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HCS1856672.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV
                     SWIILPWAISALLLPDFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLINTEGERMTLLGVLVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     IIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLFSALGGLMWYLQFFFY
                     AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA
                     ANIVGIGMAN"
     gene            complement(27889..28755)
                     /gene="rhaR"
                     /locus_tag="OQQ26_001144"
     CDS             complement(27889..28755)
                     /gene="rhaR"
                     /locus_tag="OQQ26_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418342.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HCS1856673.1"
                     /translation="MAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDF
                     CELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKL
                     NLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVPFANEMAELLFGQ
                     LVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQ
                     FRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT
                     PSQWRHLNSQKD"
     gene            complement(28811..29647)
                     /gene="rhaS"
                     /locus_tag="OQQ26_001145"
     CDS             complement(28811..29647)
                     /gene="rhaS"
                     /locus_tag="OQQ26_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HCS1856674.1"
                     /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL
                     PQEQDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS
                     SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR
                     YLNRLRLMKARHLLRHSEASVTDIAYHCGFSDSNHFSTLFRREFNWSPRDIRQGRDGF
                     LQ"
     gene            29935..31404
                     /gene="rhaB"
                     /locus_tag="OQQ26_001146"
     CDS             29935..31404
                     /gene="rhaB"
                     /locus_tag="OQQ26_001146"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HCS1856675.1"
                     /translation="MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHS
                     QNGYVTWDVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY
                     RDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
                     PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG
                     HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPTLIAATQALPACRFIINP
                     NDDRFINPEAMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGE
                     DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDF
                     RQVVSTTANLTTFTPNPDSEIAHYVAQIHSTRQTKELCA"
     gene            31401..32660
                     /gene="rhaA"
                     /locus_tag="OQQ26_001147"
     CDS             31401..32660
                     /gene="rhaA"
                     /locus_tag="OQQ26_001147"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HCS1856676.1"
                     /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
                     VSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESD
                     TPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWID
                     HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLDP
                     AHHIDAVESKLFGIGAESYTVGSNEFYLGYATSRQTALCLDAGHFHPTEVISDKISAA
                     MLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINR
                     IAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYC
                     QRHDTPTGSEWLESVRAYEKAILSQRG"
     gene            32889..33713
                     /gene="rhaD"
                     /locus_tag="OQQ26_001148"
     CDS             32889..33713
                     /gene="rhaD"
                     /locus_tag="OQQ26_001148"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HCS1856677.1"
                     /translation="MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRVDDADIAP
                     YKDNFHAQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGY
                     HILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAV
                     FTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSG
                     PTLDEAFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL"
     gene            33723..34037
                     /gene="rhaM"
                     /locus_tag="OQQ26_001149"
     CDS             33723..34037
                     /gene="rhaM"
                     /locus_tag="OQQ26_001149"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HCS1856678.1"
                     /translation="MIRKAFVMQVNPDAHEEYQSRHNPIWPELEAVLKSHGAHNYAIY
                     LDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANADNSPVSSELQEVFY
                     LP"
     gene            34338..34784
                     /locus_tag="OQQ26_001150"
     CDS             34338..34784
                     /locus_tag="OQQ26_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HCS1856679.1"
                     /translation="MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQT
                     LLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGV
                     PQSGEEDQVKIIGTLCRKIIHQEFIHQLQQGDTDQVLALLNQTLSS"
     gene            34795..36246
                     /locus_tag="OQQ26_001151"
     CDS             34795..36246
                     /locus_tag="OQQ26_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIBC"
                     /protein_id="HCS1856680.1"
                     /translation="MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQG
                     SSGIENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIVISQALKNIDQIFSE
                     LPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFG
                     LPYTDMSKGAPSFTWVVESIGYLGFTFMLPIMGAYIASSIADKPAFAPAFLVCYLAND
                     KALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVL
                     TYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSL
                     LEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAI
                     PYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLA
                     IGLALNISFIIVLKGLWLRRKAKAAQQELVHEH"
     gene            36236..37144
                     /locus_tag="OQQ26_001152"
     CDS             36236..37144
                     /locus_tag="OQQ26_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HCS1856681.1"
                     /translation="MNIELLQQLCEASAVSGDEQEVRNILINTLESCVNEITFDGLGS
                     FVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHK
                     GFKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEAEKRGVEEEVGLRGAQT
                     SAEHIKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKS
                     CAAHNDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDAL
                     LTLIRGFLTTLTAEKVNAFSQFRQVD"
     gene            37144..38886
                     /locus_tag="OQQ26_001153"
     CDS             37144..38886
                     /locus_tag="OQQ26_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000931287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative frv operon regulatory protein"
                     /protein_id="HCS1856682.1"
                     /translation="MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFT
                     LNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALN
                     LPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
                     GVTRDNFQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV
                     EQSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQMVPGIASLNIIDMQLVENI
                     TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIG
                     LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE
                     IEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS
                     FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWS
                     EQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASVLCQHPAETI
                     VGLTGYEGFMALLR"
     gene            complement(38994..>39154)
                     /locus_tag="OQQ26_001154"
     CDS             complement(38994..>39154)
                     /locus_tag="OQQ26_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3829 domain-containing protein"
                     /protein_id="HCS1856683.1"
                     /translation="KKYVRRVRDKVPYSDWDKEQLQDANSSWMVDDSFPRALREYNEM
                     VDDYNRLR"
BASE COUNT         9534 a        10133 c        10162 g         9325 t
ORIGIN      
        1 taaaatcctt ttgaaataaa taagaaccag aagcctagcg ccagtcaaca acaggaaatg
       61 ataatgagtt aacaccccgg aatttttcag aatttataaa aggcaaaatt caggcacaaa
      121 aaaagcgccg tgcggcgctt ttttcggaaa tccggtctta tttgctgccc gggatgttga
      181 aacgcttgtt gaagcggtca acacggccac cggtagcaac atcacgctgt ttgccagtga
      241 agaacgggtg gcacttgctg cacacgtcga ggttcaggtc atgaccaacg gtggagcgga
      301 ttttcattac gttaccgcaa gagcagctag cagtaatttc ttcgtatttc gggtgaatat
      361 cttttttcat gggaaaacct cggtttaagg ccgcgtcgct cttccagccc taacgccaga
      421 caccacgcga tgttaaaagt atagcttcaa tacgatcatt tcgtacgaag gcgcgaaatc
      481 atacagaaat taaccagcgt atgcaaactg atccgcactc ttctacggca atgtgtatac
      541 taacccaccg aatttcaagt caggatgatg ctatgcccgt tgcccacgtt gccttgcccg
      601 ttccgcttcc tcgtaccttt gactatctgc tgccagaagg catgacggtt aaagctgggt
      661 gtcgcgtgcg cgtgccgttt ggcaaacagc aggagcgcat cgggattgtg gtatcagtta
      721 acgatgccag cgaactgccg ctcaatgagc taaaagcggt agtcgaagtg ctggatagtg
      781 agccggtgtt tactcactcc gtctggcgat tgctgctatg ggcggcagat tactatcatc
      841 atccgattgg cgatgtgctg tttcatgcct tgccgatttt actacgccag gggcggcctg
      901 cggcgaacgc gccgatgtgg tactggtttg ccactgaaca aggtcaggcg gtggatctga
      961 acagcctgaa acgctcaccc aagcaacaac aggcgctggc agcgttacgg caaggcaaaa
     1021 tctggcgcga ccaggttgcc acgcttgaat ttaatgatgc cgcgttacag gcgctgcgca
     1081 aaaaaggtct gtgtgattta gcaagtgaaa caccagagtt tagcgactgg cgaaagaatt
     1141 atgccgtttc tagtgagcgg ttgcgattga ataccgaaca ggccaccgcc gttggcgcaa
     1201 ttcatagcgc ggcagatact ttttctgcct ggctgctggc gggcgttacc ggttccggta
     1261 aaacggaggt ttatctcagt gtactggaaa acgtgctcgc tcagggcaaa caggcgctgg
     1321 tgatggtgcc ggaaatcggc ctgacaccgc aaactatcgc ccgttttcgt gaacggttta
     1381 atgcgcccgt ggaagttctg cattccggtc tgaacgacag cgagcgtctt tcggcgtggc
     1441 tgaaagcgaa aaatggcgag gcggcgattg tgatcggcac ccgctccgcg ctgtttacgc
     1501 cgtttaaaaa tctcggcgtg attgtcattg acgaagagca cgacagttcc tacaagcagc
     1561 aggaaggctg gcgctatcat gcccgcgacc tggcggtgta tcgtgcgcat agcgagcaaa
     1621 tcccgattat tcttggctcc gcaacgcccg cgctggaaac gttatgcaac gtccagcaga
     1681 aaaaataccg cctgctgcgc ctgacccgtc gggcaggcaa tgcgcgtccg gcaattcaac
     1741 acgtgctgga tttaaaaggt cagaaggtgc aggcaggtct ggctccggcg ttaatcaccc
     1801 gtatgcgcca gcatttacag gccaacaatc aggttatcct ctttcttaat cgtcggggtt
     1861 ttgcgcctgc gctgctgtgc cacgactgcg gctggatagc cgaatgccca cgttgcgatc
     1921 actactacac gctgcatcag gcgcaacagc atttgcgctg tcaccactgt gacagtcagc
     1981 gtccggtgcc gcgccagtgt ccgtcctgcg gctctaccca tctggtgccg gtgggtctgg
     2041 gcaccgaaca gcttgaacag acgcttgcgc cgatgttccc cggcgtgccc atttcacgta
     2101 tcgaccgcga taccatcagc cgcaaagggg cgctggaaca gcaactggcg gaagtgcatc
     2161 gcggcggcgc gaggatcttg attggcacgc aaatgctggc gaaaggtcac cactttccgg
     2221 atgtgacgct ggtggcgtta ctggatgtgg acggcgcgct gttttctgtc gattttcgct
     2281 cggcagaacg tttcgcccag ctttacaccc aggtcgccgg tcgtgccggg cgtgcgggta
     2341 aacagggcga agtggtgctg caaacgcacc atccggaaca tcctctgttg caaacgttgc
     2401 tctataaagg ctacgacgcc tttgccgaac aggcgctggc tgagcgacgc atgatgcagc
     2461 tgccgccgtg gaccagccat gtgattgtgc gtgcggaaga tcataacaat cagcacgcgc
     2521 cgctgttcct gcaacaactg cgtaatctga tcctttccag cccgctggca gacgacaaac
     2581 tgtgggttct cggcccggtt ccggctctgg cacctaagcg tggtggccgc tggcgctggc
     2641 agatcttgtt gcagcaccct tcccgcgtgc gcttgcaaca catcattagt ggtacgctgg
     2701 cgcttattaa tacaataccg gattcccgca aggtgaaatg ggtgttggat gtcgatccca
     2761 tcgaaggcta atgcgcaaac gttgcgaggc ggatcgaaaa attcaatatt catcacactt
     2821 ttcatgaaaa ttctgtaacc gttttcacgc gctatctgct aaaaatgttg ccgatgtgaa
     2881 gtaaacatgg atgtagtacg cctgacgtgc caagcgaggg gtgagtgtga aagcgaagaa
     2941 gcaggaaact gccgcgacca tgaaagacgt tgccctcaag gcaaaagtct ctacagcgac
     3001 tgtctcccga gcattaatga atcccgataa agtctcccag gccacccgta atcgggttga
     3061 aaaagcggcc cgggaagtgg gttatttacc gcagcctatg gggcgcaacg tcaagcgtaa
     3121 tgaatcccgc accattctgg tgattgtccc ggatatctgc gatcccttct ttagcgaaat
     3181 tattcgcggt atagaagtta cggcggcaaa tcacggatat ctggtgctga ttggcgactg
     3241 tgcgcatcaa aatcagcagg aaaaaacctt tatcgatttg atcatcacca agcaaattga
     3301 tggcatgttg ctgctgggtt caaggctgcc gtttgatgcc agcattgagg aacagcgtaa
     3361 tctgccgccg atggtgatgg cgaacgaatt tgcaccggaa ctggagctgc ctaccgttca
     3421 tatcgacaat ctgaccgccg catttgatgc agtaaattat ttatatgagc aagggcataa
     3481 acggattggc tgtatagccg gtcccgaaga gataccactg tgtcactacc gcctgcaagg
     3541 ctatgttcag gcgctgcatc gctgcggaat tatggttgat ccacaataca tcgcccgtgg
     3601 cgacttcacc ttcgaagccg gcagcaaagc gatgcaacag ctccttgagc ttccacaacc
     3661 gcctactgct gtcttctgcc atagcgatgt gatggcgctc ggcgcacttt ctcaggcaaa
     3721 acgccagggg ctgaaagtac cggaagacct ttccataatc ggttttgata acatcgacct
     3781 gacgcaattt tgtgatccgc cgctgacaac catcgcgcag ccgcgttacg aaatcggtcg
     3841 ggaagctatg ctgttattgc ttgatcaaat gcaggggcaa cacgttggca gtggctctcg
     3901 tttaatggat tgcgaactta tcatccgggg atcaacacgc gcgttacctt aaagtaaacc
     3961 tttaagactg ccgtgactgg tcaaaggccc gccgcttaag taacatggcg ggctgacgaa
     4021 cgaataaata cagcgaaacg atagtggcac aacgagatta tgtacgccgc agccaaccgg
     4081 caccttcgcg gcgaaaaaag agcacctcac ggaaaaagca acgaaatctg cctgcggttt
     4141 ctcccgctat ggtcgctatt gctgccgccg ttcttgtgac ctttatcggt ggtctgtact
     4201 tcattacgca tcacaagaaa gaagagtccg agacgctgca aagccagaaa gtgaccggaa
     4261 acggactacc accaaaacca gaagaacgct ggcgctacat taaagagctg gaaagtcgcc
     4321 agccgggtgt gcgtgcgccc acagaacctt ctgccggtgg tgaagtgaaa acgccggagc
     4381 aactgacacc agaacaacgt cagcttcttg aacaaatgca ggctgatatg cgccagcagc
     4441 caacgcagct ggttgaagtt ccgtggaatg aacagacgcc ggaacagcgt cagcaaacgc
     4501 tacaacgcca gcgtcaggcg cagcaattag cggagcagca acgcctggct cagcagtcgc
     4561 gtacgactga acaaagctgg cagcagcaga cgcgtacgtc gcaagccgcg ccggtacagg
     4621 cgcaaccgcg ccagtctaaa ccagcttcta cacagcagcc gtaccaggat ctgctgcaaa
     4681 cccctgcgca cacgaccgcg cagtcgaagc cgcagcaagc tgcgccggtt gctcgtgccg
     4741 ctgatgcgcc aaaaccgacg gcggagaaaa aagacgaacg ccgctggatg gtgcagtgcg
     4801 gttcgttcag aggcgcggaa caggcagaga cggtacgtgc tcagctggcg ttcgaaggat
     4861 ttgactcgaa aatcaccacc aacaatggct ggaatcgtgt ggtcattggc ccggtgaaag
     4921 gcaaagagaa cgcagacagc accctcaatc ggttgaagat ggcgggtcat acaaactgca
     4981 ttcggctcgc cgccgggggt tgaaaccctc aaaatccccc ccatctataa ttgcattatg
     5041 ccccgtactt ttgtacgggg tttgtactct gtattcgtaa ccaaggggtc agctcgtgac
     5101 aactatagta agcgtacgcc gtaacggcca tgtggtcatc gctggtgatg gtcaggccac
     5161 gttgggcaat accgtaatga aaggcaacgt gaaaaaggtc cgccgtctgt acaacgacaa
     5221 agtcatcgcg ggctttgcgg gcggtactgc ggatgctttt acgctgttcg aactgtttga
     5281 acgtaaactg gaaatgcatc agggccatct ggtcaaagcc gccgttgagc tggcgaaaga
     5341 ctggcgtacc gatcgcatgc tgcgcaaact tgaagcactg ctggcagtcg cggatgaaac
     5401 tgcatcgctt atcatcaccg gtaacggtga cgtggtgcag ccagaaaacg atcttattgc
     5461 tatcggctcc ggcggccctt acgcccaggc tgcggcgcgt gcgctgttag aaaatactga
     5521 actgagtgct cgtgaaattg ctgaaaaggc gttggatatt gcaggcgaca tttgcatcta
     5581 taccaaccat ttccacacca tcgaagaatt aagctacaaa gcgtaaggat ctcccatgtc
     5641 tgaaatgacc ccacgcgaaa tcgtcagcga actggataag cacatcatcg gccaggacaa
     5701 cgccaagcgt tctgtggcga ttgctctgcg taaccgctgg cgtcgcatgc agctcaacga
     5761 agagctgcgc catgaagtga ccccgaaaaa tatcctgatg atcggcccga ccggtgtcgg
     5821 taaaactgaa atcgcccgtc gtctggctaa gctggcgaat gcgccgttca tcaaagttga
     5881 agcgaccaaa ttcaccgaag tgggctatgt cggtaaggaa gtggattcta ttattcgcga
     5941 tctgaccgat gccgccgtga aaatggtacg cgtccaggct atcgagaaaa accgttatcg
     6001 cgctgaagaa ctggcagaag aacgtattct cgacgtgctg atcccacctg ctaaaaacaa
     6061 ctggggacag actgaacagc agcaggaacc ttccgctgct cgtcaggcat tccgcaaaaa
     6121 actgcgtgaa ggccagcttg atgacaaaga aatcgagatc gatcttgccg cagcaccgat
     6181 gggcgttgaa attatggctc ctccgggcat ggaagagatg accagccagc tgcagtccat
     6241 gttccagaac ctgggcggcc agaagcaaaa agcgcgtaag ctgaaaatca aagacgccat
     6301 gaagctgctg attgaagaag aagcggcgaa actggtgaac ccggaagagc tgaagcaaga
     6361 cgctatcgac gctgttgagc agcacgggat cgtgtttatc gacgaaatcg acaaaatctg
     6421 taagcgcggc gagtcttccg gtccggatgt ttctcgtgaa ggtgttcagc gtgacctgct
     6481 gccgctggta gaaggttgca ccgtttccac caaacacggg atggtcaaaa ctgaccacat
     6541 tctgtttatc gcttctggcg cgttccagat tgcgaaaccg tctgacctga tcccggaact
     6601 gcaaggtcgt ctgccaatcc gcgttgagct gcaggcactg accaccagcg acttcgagcg
     6661 tattctgacc gaaccgaatg cctctatcac cgtgcagtac aaagcactga tggcgactga
     6721 aggcgtaaat atcgagttta ccgactccgg tattaagcgc atcgcggaag cggcatggca
     6781 ggtgaacgaa tctaccgaaa acatcggtgc tcgtcgttta cacactgttc tggagcgttt
     6841 aatggaagag atttcctacg acgccagcga tttaagcggt caaaatatca ctattgacgc
     6901 agattatgtg agcaaacatc tggatgcgtt ggtggcagat gaagatctga gccgttttat
     6961 cctataatcg cgttcaatca ttttcatcat tgtttgatgg ggctgaaagg ccccattttt
     7021 attggcgcgt attatgactg aacaacaaat tagccgaact caggcgtggc tggaaagttt
     7081 acgacctaaa accctccccc tcgcctttgc tgcaattatc gtcgggacgg cgctggcatg
     7141 gtggcaaggt cacttcgatc cgctggtcgc cctgctggca ctaattaccg ccgggctatt
     7201 acagatcctt tctaacctcg ccaatgatta cggcgatgcg gtaaaaggca gcgataaacc
     7261 tgaccgcatt gggccgctac gcggcatgca aaaaggggtc attacccagc aagagatgaa
     7321 acgggcgctc attattaccg tcgtgctcat ctgtctctcc gggctggcac tggttgcagt
     7381 ggcatgccat acgctggccg attttgtcgg tttcctgatt cttggcgggt tgtcgatcat
     7441 tgccgctatc acctacaccg tgggcaatcg tccttatggt tatatcggtc tgggtgatat
     7501 ttccgtactg gttttctttg gctggttgag cgtcatgggg agctggtatt tacaggctca
     7561 tacattgatt ccggcactga tccttccggc gaccgcctgt ggcctgctgg caacggcagt
     7621 actgaacatt aataacctgc gtgatatcaa tagcgaccgc gaaaatggca aaaacacgct
     7681 ggtggtgcgc ttaggtgaag tgaacgcgcg tcgttatcat gcctgcctgc tgatgggctc
     7741 tctggtatgt ctggcgctgt ttaatctctt ttcgctgcat agcctgtggg gctggctgtt
     7801 cctgctggcg gcaccattac tggtgaagca agcccgttat gtgatgcggg aaatggaccc
     7861 ggtggcgatg cgaccaatgc tggaacgtac tgtcaaggga gcgttactga ctaacctgct
     7921 gtttgtttta gggatattcc taagccagtg ggcagcataa ctgacaaata tcaattaaca
     7981 attgatgatt ttgccaacag cccacatagc gcgatatact gaaaattctc gcagcaactg
     8041 aatgttaagc ctatgaaata cgatacttcc gagctttgtg acatctatca agaagatgtt
     8101 aacgtcgtgg aaccgctgtt ctccaacttt ggcggacggg cgtcgtttgg cggacaaata
     8161 atcacggtaa aatgtttcga ggacaacggg ttgctgtacg atctgctcga acagaatggc
     8221 cgtggtcgtg ttcttgtcgt cgatggcggt ggttctgttc gtcgcgcact ggtcgatgct
     8281 gaactggcgc gtctggcagt acaaaatgaa tgggaaggtc tggttattta cggcgcggtg
     8341 cgtcaggtag atgacctgga agagttggat atcggcatcc aggcgatggc ggcaattccg
     8401 gttggtgccg ctggcgaagg cattggcgaa agcgatgtcc gcgtcaattt tggcggtgta
     8461 accttcttct ccggcgacca tctttatgcc gacaataccg ggattattct ttcagaagat
     8521 ccgctggata ttgaatgata agaaaggcac cttgcggtgc cttttttctg cgttacctgt
     8581 tggcctacac agtaaagaaa ttacgcgaaa gatgaagcgt aatcagacct cttccatgcg
     8641 acccagcagg gcctgcagac gttcctgcca gccgttctgc tgttctttca gatggttgtt
     8701 ctcacgctcc agctcttcgc gctgatgctg ggcattttga acttcctgcg acagtgagtt
     8761 gtttttttct ttcagctctt cgatttccat ctgcaacaga gtgatggtat caatcgcctg
     8821 ctgtactttt gcttccagtt tctcaaacac ttctaatgac attgtcatac ctctcctgaa
     8881 ttgcaaggcg ttgatggata aaaaatcctc gtcccgatta ccggtgacgc cttaataaat
     8941 acgagcgcac tttagttagc tccgattgta tgaagccgcg ccatcgctgt ccagctgcac
     9001 gccttgcaga ttacggtttg ccacactttt catccttctc ctggtgacat aatccacacc
     9061 aatcgaaaat gttaataaat ttgttgcgcg aatgatctaa caaacatgca tcatgtacaa
     9121 tcagatggaa taaatggcgc gataacgctc attttatgac gaagcacaca cattttaagt
     9181 tcgatatttc tcgtttttgc tcgttaacga taagtttaca gcatgcctac aagcatcgtg
     9241 gaggtccgtg actttcacgc atacaacaaa cattaactct tcaggatccg attatgagtc
     9301 aaacatcaac cttgaaaggc cagtgcattg ctgaattcct cggtaccggg ttgttgattt
     9361 ttttcggtgt gggttgcgtt gcagcactaa aagtcgctgg tgcgtctttt ggtcagtggg
     9421 aaatcagtgt catttgggga ctgggggtgg caatggccat ctacctgacc gcaggggttt
     9481 ccggcgcgca tcttaatccc gctgttacca ttgcattgtg gctgtttgcc tgtttcgaca
     9541 agcgcaaagt tattcctttt atcgtttcac aagttgccgg cactttctgc gctgcggctt
     9601 tagtttacgg gctttactac aatttatttt tcgacttcga gcagactcat cacattgttc
     9661 gcggcagcgt tgaaagtgtt gatctggctg gcactttctc tacttaccct aatcctcata
     9721 tcaattttgt gcaggctttc gcagttgaga tggtgattac cgctattctg atgggactga
     9781 tcctggcgtt aacggacgat ggcaacggtg taccacgcgg ccctttggct cccttgctga
     9841 ttggtctact gattgcggtc attggcgcat ctatgggccc attgacgggt tttgccatga
     9901 acccagcgcg tgacttcggt ccgaaagtct ttgcctggct ggcgggctgg ggcaatgtcg
     9961 cctttaccgg cggcagagac attccttact tcctggtgcc gctttttggc cctatcgtgg
    10021 gcgcgattgt aggtgcattt gcctaccgca aactgattgg tcgccatttg ccttgcgata
    10081 tctgtgttgt ggaagaaaag gagaccacaa ctccttcaga acaaaaagct tcgctgtaat
    10141 atgactacgg gacaattaaa catgactgaa aaaaaatata tcgttgcgct cgaccagggc
    10201 accaccagct cccgcgcggt cgtaatggat cacgatgcca atatcattag cgtgtcgcag
    10261 cgcgaatttg agcaaatcta cccaaaacca ggctgggtag aacacgaccc aatggaaatc
    10321 tgggccaccc aaagctccac gctggtagaa gtgctggcga aagccgatat cagttccgat
    10381 caaattgcag ctatcggtat tacgaaccag cgtgaaacca ctattgtctg ggaaaaagaa
    10441 accggcaagc ctatctataa cgccattgtc tggcagtgcc gtcgtaccgc agaaatctgc
    10501 gagcatttaa aacgtgacgg tttagaagat tatatccgca gcaataccgg tctggtgatt
    10561 gacccgtact tttctggcac caaagtgaag tggatcctcg accatgtgga aggctctcgc
    10621 gagcgtgcgc gtcgtggtga attgctgttt ggtacggttg atacgtggct tatctggaaa
    10681 atgactcagg gccgtgtcca tgtgaccgat tacaccaacg cctctcgtac catgttgttc
    10741 aacatccata ccctggactg ggacgacaaa atgctggaag tgctggatat tccgcgcgag
    10801 atgctgccag aagtgcgtcg ttcttccgaa gtgtacggtc agactaacat tggcggcaaa
    10861 ggcggcacgc gtattccaat ctccgggatc gccggtgacc agcaggccgc gctgtttggt
    10921 cagttgtgcg tgaaagaagg gatggcgaag aacacctatg gcactggctg ctttatgctg
    10981 atgaacactg gcgagaaagc ggtgaaatca gaaaacggcc tgctgaccac catcgcctgc
    11041 ggcccgactg gcgaagtaaa ctatgcgctg gaaggtgcag tgtttatggc gggcgcatcc
    11101 attcagtggc tgcgcgatga gatgaagttg attaacgacg cctacgattc cgaatacttt
    11161 gccaccaaag tgcaaaacac caacggcgta tatgtggttc cggcatttac cgggctgggt
    11221 gcgccgtact gggatccgta tgcacgcggg gcgattttcg gtctgactcg tggagtgaac
    11281 gctaaccaca ttatccgcgc gacgctggag tctattgctt atcagacgcg tgacgtactg
    11341 gaagcgatgc aggccgactc cggtattcgt ctgcacgcgc tgcgcgtgga cggcggtgcg
    11401 gtggcgaaca atttcctgat gcagttccag tcggatattc tcggcacccg cgttgagcgc
    11461 ccggaagttc gcgaagtgac tgcattgggt gcggcctatc ttgctggtct ggcggtcggt
    11521 ttctggcaga acctcgacga gctgcaagag aaagcggtga ttgaacgcga gttccgtcca
    11581 ggcatcgaaa ccactgagcg taattaccgt tacgcaggct ggaaaaaagc ggtcaaacgc
    11641 gcgatggcgt gggaagaaca cgacgagtaa tgtaaatgcc ggatgaagcg tttatgccgc
    11701 atccggtagt cctgaaaccg tgcgggggca accccgcaca catcaataat cccacccttc
    11761 ccctgtgcta cacttcgcgc cattccttac tgcttagagt ttgctatgag acgagaactt
    11821 gccatcgaat tttccctcgt caccgaatct gcggcgctgg ctggctacaa atggttagga
    11881 cgcggcgata aaaacaccgc ggacggcgcg gcggtaaacg ccatgcgtat tatgctcaac
    11941 caggtcaaca ttgacggcac catcgtcatt ggtgaaggtg aaatcgacga agcaccgatg
    12001 ctctacattg gtgaaaaagt cggtactggt cgcggcgaca cggtagatat tgctgttgat
    12061 ccgattgaag gcacgcgcat gacggcgatg ggccaagcta acgcgctggc ggtgctggca
    12121 gtaggcgata aaggctgctt cctcaatgcg ccggatatgt atatggagaa gctgattgtc
    12181 gggccgggag ccaaaggcac cattgatctg aacctgccgc tggcggataa cctgcgcaat
    12241 gttgcggcgg cgctcggcaa accgttgagc gaactgacgg taacgattct ggctaaacca
    12301 cgccacgatg ccgttatcgc tgaaatgcag caactcggcg tacgcgtatt tgctattccg
    12361 gacggcgacg ttgcggcctc aattctcacc tgtatgccag acagcgaagt tgacgtgctg
    12421 tacggaattg gtggcgcgcc ggaaggcgtg gtttctgcgg cggtgatccg cgcattagat
    12481 ggcgacatga acggtcgtct gctggcgcgt catgacgtca aaggcgacaa tgaagagaat
    12541 cgtcgcattg gcgagcagga gctggcacgc tgcaaagcga tgggcatcga agccggtaaa
    12601 gtattgcgtc tgggcgatat ggcgcgcagc gataacgtca tcttctctgc caccggtatt
    12661 accaaaggcg atctgctgga aggcattagc cgcaaaggca atatcgcgac taccgaaacg
    12721 ctgctgatcc gcggcaagtc acgcaccatt cgccgcattc agtccatcca ctatctggat
    12781 cgcaaagacc cggaaatgca ggtgcacatt ctctgagtga tttgatcgat tgagccttcc
    12841 agtccttcgg gactggaatt tttttgttcg gagaacgaag ataaggcaag tcaatcaaaa
    12901 caggagaaaa acatggctga ttgggtaaca ggcaaagtca ctaaagtgca gaactggacc
    12961 gacgccctgt ttagtctcac cgttcacgct cccgtgcttc cgtttaccgc cgggcaattt
    13021 accaagcttg gccttgaaat cgacggcgaa cgcgtccagc gcgcctactc ctatgttaac
    13081 tcgcccgata atcccgatct ggagttttac ctggtcaccg tccccgatgg caaattaagc
    13141 ccacgactgg cggcactgag accgggcgat gaagtgcagg ttgttagcga agcggcagga
    13201 ttctttgtgc tcgatgaagt gccagattgc gaaacgctat ggatgctggc aaccggtaca
    13261 gcgattggcc cttatttatc gattctgcaa ctaggtaaag atttagatcg cttcaaaaat
    13321 ctggtcctgg ttcacgccgc acgttatgcc gccgacttaa gctatttgcc actgatgcaa
    13381 gaactggaaa aacgctacga aggaaaactg cgcattcaga cggtggtcag tcgggaaacg
    13441 acggcggggt cactcaccgg gcggataccg gcgttaattg aaagtggtga actggaaagc
    13501 gcggttggcc tgccgatgaa taaagaaacc agccatgtga tgctgtgcgg caatccacag
    13561 atggtgcgcg atacgcaaca gttgctgaaa gagacccggc agatgacgaa acatttacgt
    13621 cgccgaccgg gtcacatgac agcggagcat tactggtaag cggttactta tcgataaacg
    13681 gcacgatgag caaatccgca ctcaacttat tgatcatccc gcgatatgcc ggcatcaacc
    13741 ggttgataaa tgagtggtga tgaccacaga caaggaggtc gcactgctct ttttgcataa
    13801 tttccagcag tgtttccggc atttctccgc gttcaatacg cagttttgtc ttcggccatt
    13861 gaatattttt cgtcagttta tacagcttgt tatccgactt attcttcaac aattgaagaa
    13921 tatcttctgt tgcagggaag tagatacccg ggtacaactc gcttaagcca tcatcaatat
    13981 gaattaacgt caggtgagcg tcattatgtc tggcgagctc cagggcttta ttcaccagta
    14041 aggcatcttc ttcattcccg gaaattgcca cgccaatgtg tttataagcc atgtttaact
    14101 ccttctaaag caactccatc aagctaacga acgcagtgat aactcaaaaa taatcatctc
    14161 ggcctggcat gagaaggtga aggccgcatc aagctcaact tgcccctcca gatccttaat
    14221 cttataggcc acgctggccc cttcatctgc agaggatgca gcggcggcaa gctctttcag
    14281 tttggtcata aaggactctg cttcttcgcg ggtggcaaaa aagcgcgaaa acttactggt
    14341 acagttgtcg ttatcaatca ccgtaccgat atcaatcgca catcctttag tactgcattt
    14401 atctacgaca tctttcatag ggcacctctg tatattcgcc tctctgtcga ttacgactta
    14461 agaataatgc gccgttaagg gaagaacaaa caagtaatga tcttatggat taccattttt
    14521 ttgatattgc ttaaggtgaa gagttcagaa ggattttccg ggtattgtca tttgcatcgt
    14581 ggaaataaca atcccggaaa aaaatagcag taagagatat attaaaggtt aattacttga
    14641 tttattgtcg gctttatact tcacatcctg agtatcttta ccatatttat tttcgccttg
    14701 tgtgccaaca aacgcaccaa gatcgataag catcatcacc agaatcaacg tcgggacaaa
    14761 acgccccacc gcccattgcc agacacccgg taaaatcgcc cagttacccg ccagcagcat
    14821 ccacgccaca atcatcagaa atgcccatgc gccggaacgc ccgcgatcat gcaagcgctt
    14881 aacagttact gccgctgttg gccagagcaa gcacacaagg caaaacgccg cggtctgaat
    14941 atcgagtaga ttcttacccg ccagtgagaa aagcaccagc atgcctgcga accacaggcc
    15001 tatccaaatc cagaaatcac ggcgtccaat acgcccttta aatgagaata accattgctg
    15061 tatggtcatg taagttcctt gatggttgtc ttttccagga ttctaccctt ttgacaaggg
    15121 cgacagatat cgttttaatc agagccagtc ataacaaaag gtactgtcaa tgaagccagg
    15181 gtgtacgctg ttttttctct tatgttctgc attaaccgtt acaacaacgg cgcatgcaca
    15241 aacaccagat acggcaacga ccgcgcctta tctgctggct ggagccccta ctttcgatct
    15301 ctccatcagc cagtttcgag aagactttaa cagccagaat cccagcctgc cactgaacga
    15361 atttcgtgcc atcgacagca gtcccgacaa agccaatctc actcgtgctg caagtaaaat
    15421 taacgagaac ttgtatgctt ctacagcgct ggagcgcggt accttaaaaa tcaaaagcat
    15481 tcaaatgacc tggctaccca tccaggggcc agagcaaaaa gcagcgaaag cgaaagctca
    15541 ggaatacatg gcagcagtga tccgcacact caccccatta atgaccaaaa cacaaagcca
    15601 gaaaaaactg cagtcgctac taacggcggg gaaaaacaaa cgttattaca ccgagacaga
    15661 aggtgcactg cgttatgttg tcgcggacaa cggcgaaaag gggctgacct tcgctgttga
    15721 accgattaag ctggcgctat ctgaatcgct tgaaggtttg aataaatgac aaaaagcaaa
    15781 gcctttgtgc cgatgaatct ctatactgtt ccacagacct gctgccctgc ggggcggcca
    15841 tcttccttta ttcgcttata agcgtggaga attaaaatgc gacatccttt agtgatgggt
    15901 aactggaaac tgaacggcag ccgccacatg gttcacgagc tggtttctaa cctgcgtaaa
    15961 gagctggcag gtgttgctgg ctgtgcggtt gcaatcgcac caccggaaat gtacatcgat
    16021 atggcgaagc gcgaagctga aggcagccac atcatgctgg gtgcgcaaaa cgtggacctg
    16081 aacctgtccg gcgcattcac cggtgaaact tctgccgcta tgctgaaaga catcggcgct
    16141 cagtacatca tcatcggcca ctctgaacgt cgtacttacc acaaagagtc tgacgaactg
    16201 atcgcgaaaa aattcgcggt gctgaaagag cagggtctga ctccggttct gtgcatcggt
    16261 gaaaccgaag ctgaaaacga agcgggaaaa actgaagaag tttgcgcacg tcagatcgac
    16321 gcggtactga aaactcaggg tgctgcggca ttcgaaggtg cggttatcgc ttacgaacct
    16381 gtatgggcaa tcggtactgg caaatctgca actccggctc aggcacaggc tgttcacaaa
    16441 ttcattcgtg accacatcgc taaagttgac gctaacatcg ctgaacaagt gatcattcag
    16501 tacggcggct ctgtaaacgc gtctaacgct gcagaactgt ttgctcagcc agacatcgac
    16561 ggcgcgctgg ttggcggtgc gtctctgaaa gctgacgctt tcgcagtgat cgttaaagct
    16621 gcagaagcgg ctaaacaggc ttaagtctga caggtgccgg atttcatatc cggcacttac
    16681 tttccttaac tcttcgcctt aacgcaaaat ctcacactga tgatcctgaa tttcttcggc
    16741 tgaagcacgg ttcagcgtca gtagatttcg ttgtgtcgcc agcaatacaa atgagttatc
    16801 actctgccgt accatcgcca gcccgtagct tcccatatgt tcccgcgcct caggtacttc
    16861 ttctgccagc atcataaatg ggctacgttg taccagttcg ctttccgtta cccgacgcgc
    16921 caggtattca tgcccgcgca aaccacctgg cagtggcaac cagcggctgc tgatgttcgc
    16981 cagattgtta tccagttgtt cgcgcacatc aggacgaata caagagatat gaatatgaaa
    17041 atggttttgc gtacgcccgg tgcgggagtt gatcgccaaa gaaaccgcgc gatcgggaac
    17101 cggctggccg tattttttgc tcataaaatc acgcgcctgc caggccaacc aaaagaagtt
    17161 cggcgttgaa ggatcggtca acaaaggact ttcagtaccg ttaatacgat acgttggcat
    17221 caacagatat tgcagtgggc cattaagatc ttttaaaacc acgtatccgg cattgggttt
    17281 gacttccgca catggcgaag gattttgatt ttgctgctga ttgggcaaac attcctcaag
    17341 gacaatctta cgtaatgtat ccgactcttc accggttaat ttccagtaac caataccggc
    17401 agccacaacg gcgataacta tcatcaccaa aaaaagaaga cccgcttttt tcatcttttt
    17461 ttccctgtac ctcaaagaga tgcaagggta acgcaaaatc gtgacaaata aaaaacccgg
    17521 tcgcgagaaa ccaccgggtt tgataattat cctggggaaa tcagcgttta ctgatctgat
    17581 cgaacgtacc gccgttagca aaatgctctt tttgcgcttt cgtccagccg ccgaactctt
    17641 catcaatggt gaataacttc agctttggaa acgcattttc gtactttttc gccacctcag
    17701 cgtcgcgcgg acggtagtag tttttcgcgg caatttcctg accttctggc gagtagagat
    17761 atttcaggta ggcttccgcc acctctttgg tgcctttttt ctcgaccact ttatcgacca
    17821 ccgacacggt tggctctgcg aggatagact cactcggcgt gacgatttcg aatttatctt
    17881 tccccagttc attcgctgcc agcagagctt cgttttccca ggcgatcagt acatcgccaa
    17941 tcccgcgctc gacaaaggtg ttagtggagc cgcgcgcgcc agaatccaga acttcgacgt
    18001 ttttatacag tgcccgaaca aaatcctgtg cttttgcctg atcgttgttg ttgtgatgca
    18061 gcgcgtagcc ccaggcagcc aggtagttcc agcgtgcgcc accagagctt ttcggattag
    18121 gcgtgatcac cgaaacaccc ggtttaatca gatcgttcca gtcatggatc tgcttcggat
    18181 tgcccttacg caccaggaaa acaatggtgg aagtgtacgg tgcggagtta tccggcagac
    18241 gtttgatcca ctctttatca atccgcccgc gttccgcaat tgcgtccacg tcataggcca
    18301 gagccagcgt gacaacatca gcttcaatac cgttgattac cgacgttgct tgtttgcctg
    18361 aaccaccgtg tgactgacga atcaccacgt tatcgccagt ttgctgtttc cagtgggcgc
    18421 tgaatgcctt gttgtactgt tcgtacaatt cgcgcgttgg atcatatgaa acgttaagaa
    18481 gctgaatatc ctttgccata acgctggttg ccgccagcaa aaatgttaac cctacgcccc
    18541 acttgttcat cgcccgactc tcttatgttg tgttgtgatg agcaaagcgt gccagaaggt
    18601 taaccaaaca ttaaagaata aaaaaagatt ggctataact tgcggctata tgttgggggt
    18661 taaaaaggcg gaagaaatcc gcctcatatt gctgacaaag tgcgctttat cgatgccgga
    18721 tgcggcgcga acgccttatc cggcctacaa aagtttgcaa attcaataaa ttgcagaatt
    18781 aatgtaggcc cgataagcga agcgcatcag gcatttttgc ttctgtcatc ggtttcaggc
    18841 taaatgaatc tgcctttttc cgaaatcatt aatacagttt tttcgcgcag tccagccagt
    18901 cgcctttgaa cggacgcttc atgttttcga tagcgtcgat gatgtcgtgg tgaaccagct
    18961 gttcgttctg gatacctacg caacgaccgc cgtaacctgc cagcagcaga tcgatagcgt
    19021 aagcgcccat acgggaagcc agaatacggt cgtaaggcac cggagaacca ccgcgctgga
    19081 tatggcccag cacagttgcg cgggtttcac gaccggtttc tttctcgatg aaatgcgcca
    19141 gttcgtcaac atcacacata tgttcggtaa tcgccacgat cgcgtgtttt ttacctttcg
    19201 cgatacccgc tttgatttcg tttaccaggt cttcacggct gaattcaact tccggaacca
    19261 caacgaattc acagccacca gcaatggccg cagccaacgt cagatcgcca caataacggc
    19321 ccatcacttc caccacggaa atacgctggt gagaagaaga ggtgtcacgc agacggtcga
    19381 tcgcttctac aacggtgctc agcgcagtga agaaaccgat agtgtagtca gtgcctttga
    19441 tgtcgttgtc gatagtgccc ggcaggccga tgcacgggaa gcccatttcg gtcagacgca
    19501 ttgcacccat gtaggaaccg tcaccgccga taaccaccag cgcatcgatc cctcgttttt
    19561 tcaggttttc gatagccacg gcgcggatgt tctcgtcgcg gaattccgga aaacgcgcag
    19621 aaccgaggaa cgtaccgcca cggttgatca tgtcagaaac gctgtaacgg tctagctgta
    19681 ccatacggtc ttcatacaga cccagatagc cgtcataaat gcccattact tccagacctt
    19741 ctgtcagcgc agaacgaaca accccgcgaa ttgcggcgtt catgcctggc gcatcaccgc
    19801 cgcttgtcaa cacaccgatt ttcttaatca tgactacctc tgaactttgg aatgcaaaat
    19861 gaaatctgtt gccggaagtc ttcttacaca tcgaagtgat ccaacgaatg tgcaaatagt
    19921 ataacaatca cttcctgctg aattgattca ggtcaggcca aatggcggta ttttatacac
    19981 aaaatgcggg tctggctctc ttttatactg attatgaaag catagaccgt ttaccctccc
    20041 tgggtacgac ggaacagggg tcctgatgga taattacatc cgatcccgga aaacgccgta
    20101 aaatagcctg ctctacctga tccgccacca tatgtgcctg aaccaaaggc agagagtctt
    20161 ccatttccaa atgaatctga ataaagcggg tcggccctga ctgccgcgtg cgaagatcgt
    20221 gagcgccgct aacacccggc caggaagtca cgatatcaat aatttcttgc cgttcctcat
    20281 caggtaatgc gcgatccagt aatgcctgta ccgcctcata tcccatgcgt aacgcgctat
    20341 ataaaatata gatgccgatt cccaatgcaa acagagcatc ggcgcgatgc cagccgtacc
    20401 aggacaaccc cagcgccagc agaattgcgc cgttcatcat aacatcagac tggtaatgta
    20461 gcatatcagc ccgcaccgcc tggctttgcg tccggcgcac cacccaacgc tgaaacgaga
    20521 caaggataat cgtacaaatt agcgccacaa ttgtcacgat aaccccgacg cctggatctg
    20581 tcatcggtgt tggagatatc agatgttgaa tacccgtcaa aaacaggaat agtgccgaac
    20641 cggagataaa catactttgc gccagcgccg cgagggactc tgctttaccg tgaccaaacg
    20701 agtgattatc gtcggcaggt tgcagggaat atcgcaccac cagtaaattc gtcaacgacg
    20761 cgccgatatc caccagcgaa tccaccagcg cggcgagaat actcaccgac ccggtatacc
    20821 accatgcaaa aattttaatc agcaatagca acgaagccat cgccgtcgca gcaatcgccg
    20881 cccgactgac cagccgtcca taagattgat tcataaatac tcccgctatc aactgacgct
    20941 agtataacgg aagcaaatca tctgcaatgc attaagcagc aggcaaattg aggataaaaa
    21001 aaaccccaca tcatgtgggg gaagacaggg atggtgtcta tggcaaggaa aacagggttt
    21061 actactggga acgtgagttg ctactactca atagcttgaa cgatgaactt ttttgccatt
    21121 gcgtcacgtc acgcaactgc tccattcgtt gttgatgttt ctcgtttaaa accgcttgct
    21181 gctccggcgt taacaggcga tacatttggt tgcggacttt tgccatctca acctgacgag
    21241 caatttgctc attcgccatt ttttctgcct gtgcgcgcac agcgttttca tcaaaatttt
    21301 ctgcggtgac aaggcgatgc attgtctcca gttcgctaac attaacagga ggctgttcgt
    21361 gccgggcctg ttgcataaga tctcgcatct gctgacgctg atgttcggtt aaacttatgc
    21421 cgtcgaacat atggctctgc gtactgcgct gcgtaagttc ttcacccgga tgccagttat
    21481 cgcctgaacc gacttcagca gcgtggctta atgaactgac tgccagcgtt gaggccatga
    21541 cggcagcggt aactatgcgc atcatttgct cccaaaatct ttctgtcgcg attcaacgat
    21601 agagagttta cgattcaggc tgcaaacatg cgtcaggggg tgtaaaacaa cgtaaagtca
    21661 tggattagcg acgtctgatg acgtaatttc tgcctcggag gtatttaaac aatgaataaa
    21721 atcctgttag ttgatgatga ccgagagctg acttccctat taaaggagct gctcgagatg
    21781 gaaggcttca acgtgattgt tgcccacgat ggggaacagg cgcttgatct tctggacgac
    21841 agcattgatt tacttttgct tgacgtaatg atgccgaaga aaaatggtat cgacacatta
    21901 aaagcacttc gccagacaca ccagacgcct gtcattatgt tgacggcgcg cggcagtgaa
    21961 cttgatcgcg ttctcggcct tgagctgggc gcagatgact atctcccgaa accgtttaat
    22021 gatcgtgagc tggtggcacg tattcgcgcg atcctgcgcc gttcgcactg gagcgagcaa
    22081 cagcaaaaca acgacaacgg ttcaccgaca ctggaagttg atgccttagt gctgaatcca
    22141 ggccgtcagg aagccagctt cgacgggcaa acgctggagt taaccggtac tgagtttacc
    22201 ctgctctatt tgctggcaca gcatctgggt caggtggttt cccgtgaaca tttaagccag
    22261 gaagtgttgg gcaaacgcct gacgcctttc gaccgcgcta ttgatatgca catttccaac
    22321 ctgcgtcgta aactgccgga tcgtaaagat ggtcacccgt ggtttaaaac cttgcgtggt
    22381 cgcggctatc tgatggtttc tgcttcatga taggcagctt aaccgcgcgc atcttcgcca
    22441 tcttctggct gacgctggcg ctggtgttga tgttggtttt gatgttaccc aagctcgatt
    22501 cacgccagat gaccgagctt ctggatagcg aacagcgtca ggggctgatg attgagcagc
    22561 atgtcgaagc tgagctggcg aacgatccgc ccaacgattt aatgtggtgg cggcgtctgt
    22621 tccgggcgat tgataagtgg gcaccgccag gacagcgttt gttattggtg accaccgaag
    22681 gccgcgtgat cggcgctgaa cgcagcgaaa tgcagatcat tcgtaacttt attggtcagg
    22741 ccgataacgc cgatcatccg cagaagaaaa agtatggccg cgtggaactg gtcggtccgt
    22801 tctccgtgcg tgatggcgaa gataattacc aactttatct gattcgtccg gccagcagtt
    22861 ctcaatccga tttcattaac ttactgtttg accgcccgct attactgctg attgtcacca
    22921 tgttggtcag tacgccgctg ctgttgtggt tggcctggag tctggcaaaa ccggcgcgta
    22981 agctgaaaaa cgctgccgat gaagttgccc agggaaactt acgccagcac ccggaactgg
    23041 aagcggggcc acaggaattc cttgccgcag gtgccagttt taaccagatg gtcaccgcgc
    23101 tggagcgtat gatgacctcc cagcagcgtc tgctttctga tatctctcac gagctgcgca
    23161 ccccactgac gcgtctgcaa ctgggtacgg cgttactgcg ccgtcgtagc ggtgaaagca
    23221 aggaactgga gcgtattgaa accgaagcgc aacgtctgga cagcatgatc aacgatctgt
    23281 tggtgatgtc acgtaatcag caaaaaaacg cgctggtaag cgagaccatc aaagccaacc
    23341 agttgtgggg cgaagtgctg gataacgcgg cgttcgaagc cgagcaaatg ggcaagtcgt
    23401 tgacagttaa cttcccgcct gggccgtggc cgctgtacgg caatccgaac gccctggaaa
    23461 gtgcgctgga aaacattgtt cgtaatgctc tgcgttattc ccatacgaag attgaagtgg
    23521 gctttgcggt agataaagac ggtatcacca ttacggtgga cgacgatggt cctggcgtta
    23581 gcccggaaga tcgcgaacag attttccgtc cgttctatcg gaccgatgaa gcacgcgatc
    23641 gtgaatctgg cggtacagga ttggggctgg cgattgttga aaccgccatt cagcagcatc
    23701 gtggctgggt gaaggcagaa gacagcccgc tgggcggttt acggctggtg atttggttgc
    23761 cgctgtataa gcggagttaa actccgcatt tgtaggcagg ataaggcatt tacgccgcat
    23821 ccggcatttg agcaggatgc ctgatgcgac gctgatagcg tcttatcagg cctacactcc
    23881 gggggttact ttccccacaa ccggcgggaa aaatcttcga tcttgccgct cagtcggcgc
    23941 ttttgcatcg tccgcgtcca gcttttcgat aacccggcgg cggagagtaa acggtgatat
    24001 tgatcgtcat caaacggcat atgccatgcg atggcggcag cctcctgcac ggtcacatcg
    24061 ctgacacggg aaaccaactc cagcggcgcg tccgcagaca ctttccctgg cgctatcacg
    24121 ctatacaacc accccacctt acctgtgttt tgcatcaact gcgctatatc gctgatatca
    24181 aaatggtaat tgagtttata gcaaggcgag cgcggctggc tgacctgaat taatgcctct
    24241 ccccagcgga aaatatcgcc catataaaca ttactttccg tcaggccgtc ggttgagagg
    24301 ttttcaccaa acgcaggcgc aacaaacaac tccgcctgtt ccggaaattc ccgcgcccag
    24361 tagagataat gctcacgagg ataatgacac agcgctctgt ctggcccgcc gtgaaccttt
    24421 ttctccgcct gctcgtcacc ttccagcccc agctccgtca gcatcaactc accatcaacc
    24481 tggattttgg caattgcgct gggtttgcct tcgggataag cctgaatctt gcctgtgtat
    24541 acatcaaccg gatatcgcat ctgttctctc tccacgagaa atttccccat tagaccatat
    24601 ttattttatg tcaggcgtgc tgttttcgcg gtaagtatcc aggcaggaac tcaatagcaa
    24661 accggacgaa cgttagttca tccggctgtg gggattaagg aagcaggttt atttcaccgt
    24721 acctaaaatt tcgattttcg ctgctctggc tttgacttta cgtgaccaga tagaggtaag
    24781 aattggcacc agaatcgaag tcacaatgac cgccgccgct accagcgaag ttgctgccgg
    24841 agccatcggt ttaaacgcag gcaccatttc tgcaatcagc acaggtgtcg ctaccgcggc
    24901 ccctgcggaa ctggaagcgg caattccggc agtgccatcg ccaccgccaa tcaatttatc
    24961 ggcgataatc aacggaatac cggtcacgat aattactgcc acacccaaca ggatccccag
    25021 caaaccagtc tgggcaatca cagtcaaatc aatggtattg cccagcgcga aggcaaagaa
    25081 tggaatcagc gtttgcaccg ctttgctgaa aaattctcgt aattcagggt caagattccc
    25141 cagggcaaag cccaccagga acggtaatac tgcgccgacg aaaacatgcg gttcaaacga
    25201 ggcaatcccg gcagtgccca gaataatcat cgtcatgagc ggcccggact ccaacgacat
    25261 caacacaaat gccccagctt cttctttcgt accgtactgc tgcatgatgg aagcgtaaag
    25321 tccgccgttg gtcatatcca tcgccgccac cagcgccagc gttgaaagtc cggcaaagaa
    25381 tccaacttca acaccatgtt ccggaataat gcgcgaggca attgccgcaa ccacccacgc
    25441 gacggcaatt ttagttacca ccagcgtacc ggatttacgc agtaccgttc ccgtcgcgct
    25501 taattttatt gacgccccca tgcaaaaaaa ccacaccgcc agaatgggca ccgtaccggt
    25561 aatcatcccg ttggtgaatg atccaaaata tttccccgcc cccggcgaga aggtgtggca
    25621 cagtgcgcca aggaatagcg ggacgagcat catccccccc gggattttct caatcgagcg
    25681 ttttatctgc atttccatca cctgtcggca tatttttaag ggctgatgcg tcattcctca
    25741 atggagcatc agtgttgatg gaaacgaaga tagacattca tttaatcaat aaaagtgatc
    25801 aaaaccacat caattgaaac gctgttttat ttttattaga tcattgtttt ttattttgaa
    25861 attgatcaca aaaaaaccac cgccgttggc gatggttcat tttttaagct gatatgcggc
    25921 gtaaacgcct cattgcagct ggcggcaaat gattattttt tcgccgcgaa acgtgcagct
    25981 gcttcgtccc agttcaccac gttccagaac tctttgatgt agtccggacg gcggttctgg
    26041 aatttcaggt agtaagcatg ttcccacaca tccaggccca gaatcgggaa gccggaagcg
    26101 ccagaaatag cttcacccat cagcggagaa tcctggttag cagtagaaac caccgccagt
    26161 ttatcgcctt tcagcaccag ccatgcccag ccggaaccaa agcgggaagc tgccgctttc
    26221 tcaaattctg ctttgaagtt atcaacggag ccgaagtcac gttcaatagc cgctttcagg
    26281 tcaccctgca gggtggtgcc ttttttcaga cctttccaga acaggctgtg gttagcgtga
    26341 ccgccagcgt tgttgcgcag tacggttttc ttgtctgctg gcagctggtc cagtttggtg
    26401 atcagctctt caaccggcag gttggcaaat tctggcaggc tttccagcgc cgcgttggcg
    26461 ttgtttacgt aggtctgatg gtgtttggtg tggtggattt ccatggtctg cttatcgaag
    26521 tgcggttcca gggcatcgta agcatacggc agggatggca gggtatagct catattcatc
    26581 tccagtattg tcgggcggcc gattgttaat gccgcgtaag cagttggttc attatagtta
    26641 attaaatgat attgaaaatg attatcaatg ccgtactttt cgtaagggta tggttttgca
    26701 ggaaaatgcc cgagatgtga agcaaatcac ccacttaatg ccgtgattgc cagtaaatcg
    26761 acaacggcgg caacaggcga aaggttaatc gacagcacga tttttacact catctcgtcg
    26821 gagatgtgaa gcgacgaaaa atgatgagga taagaagatg agtaacgcga ttacgatggg
    26881 gatattttgg catttgatcg gcgcggccag tgcagcctgt ttttacgctc cgttcaaaaa
    26941 agtaaaaaaa tggtcatggg aaaccatgtg gtcagtcggt gggattgttt cgtggattat
    27001 tctgccgtgg gccatcagcg ccctgttact accggatttc tgggcgtatt acagctcgtt
    27061 tagtctctct acgctgctgc ctgtttttct gttcggcgct atgtggggga tcggtaatat
    27121 caactatggc ctgaccatgc gttatctcgg catgtcgatg ggaattggca tcgccattgg
    27181 cattacgttg attgtcggta cgctgatgac gccaattatc aacggcaatt tcgatgtgct
    27241 gattaacacc gaaggcgaac gcatgacgtt gctcggcgtt ctggtggcgc tgattggcgt
    27301 agggattgta actcgagccg ggcagttgaa agagcgcaag atgggcatta aagccgaaga
    27361 gttcaatctg aaaaaagggc tggtgctggc ggtgatgtgc ggcattttct ctgccgggat
    27421 gtcctttgcg atgaacgccg caaaaccgat gcatgaagcc gctgccgcac ttggcgtcga
    27481 tccactgtat gtcgctctgc caagctatgt catcatcatg ggcggcggcg cgatcatcaa
    27541 cctcggtttc tgttttattc gtctggcaaa agtgaaggat ttgtcgctaa aagccgactt
    27601 ctcgctggca aaaccgctga tcattcacaa tgtgttattc tcggcactgg gcgggttgat
    27661 gtggtatctg caattctttt tctatgcctg gggccacgcc cgcattccgg cgcagtatga
    27721 ctacatcagt tggatgctgc atatgagttt ctatgtattg tgcggcggta tcgtcgggct
    27781 ggtgctgaaa gagtggaaca atgcaggacg ccgtccggta acggtgttga gcctcggttg
    27841 tgtggtgatt attgtcgccg ctaacatcgt cggcatcggc atggcgaatt aatctttctg
    27901 cgaattgaga tgacgccact ggctgggcgt catcccggtt tcccgggtaa acaccaccga
    27961 aaaatagtta ctatcttcaa agccacattc ggtcgaaata tcactgatta acaggcggct
    28021 atgctggaga agatattgcg catgacacac tctgacctgc cgcagatatt gattgatggt
    28081 cattccagtc tgctggcgaa attgctgacg caaaacgcgc tcactgcacg atgcctcatc
    28141 acaaaattta tccagcgcaa agggactttt caggctagcc gccaaccggg taatcagctt
    28201 atccagcaac gtttcgctgg atgttggcgg caacgaatca ctggtgtaac gatggcgatt
    28261 cagcaacatc accaactgcc cgaacagcaa ctctgccatt tcgttagcaa acggcacatg
    28321 ctgactactt tcatgctcaa gctgaccgat aacctgccgc gcctgcgcca tccccacgct
    28381 acctaagcgc cagtgtggtt gccctgcgct ggcgctaaat cccggaatcg ccccctgcca
    28441 gtcaagattc agcttcagcc gctccgggca ataaataata ttctgcaaaa ccagatcgtt
    28501 aacggaagcg taggagtgtt tatcgtcagc atgaatataa aagagatcgc cacgggtaat
    28561 gcgataagga cgatcgttga gtacatgcag accattaccg cgccagacaa tcaccagctc
    28621 acaaaaatca tgtgtatgtt cggcaaagac atcttgcgga taacggtcag ccacagcgac
    28681 tgcctgctgg tcgctggcaa aaaaatcatc tttgagaagt tttaactgat gcgccaccgt
    28741 ggctacctcg gccagagaac gaagttgatt attcgcaata tggcgtacaa atacgttgag
    28801 aagattcgcg ttattgcaga aaaccatccc gtccctgacg aatatcacgc ggtgaccagt
    28861 taaactctcg gcgaaaaagc gtcgaaaagt ggttactgtc gctgaatccg caatgatagg
    28921 cgatgtcagt aacgctggcc tcactgtggc gtagcagatg tcgggccttc atcagtcgca
    28981 ggcggttcag gtaacgctga ggcgtcagtc ccgtttgctg cttaagctgc cgatgtagcg
    29041 tacgcagcga aagagaaaat tgatccgcca cggcatccca attcacctca tcggcaaaat
    29101 ggtcctccag ccaggccaga agcaagttga gacgtgatgc gctgttttcc aggttctcct
    29161 gcaaactgct tttacgcagc aagagcagta attgcataaa taagatctcg cgactggcgg
    29221 tcgagggtaa atcattttcc ccttcctgct gttccatctg tgcaaccagc tgtcgcacct
    29281 gctgcaatac gctgtggtta acgcgccagt gagaaggata ctgtccgtcc tgctcttgtg
    29341 gcagcaactg attcagcccg gcgagaaact gaaatcgatc cggcgagcga tacagcacat
    29401 tggtcagaca cagattatcg gtatgttcat acagatgccg atcatgatcg cgtacgaaac
    29461 agaccgtgcc accggtgatg gtatagggct gcccattaaa cacatgaata cccgtgccat
    29521 gttcgacaat cacaatttca tgaaaatcat gatgatgttc aggaaaatcc gcctgcggga
    29581 gccggggttc tatcgccacg gacgcgttac cagacggaaa aaaatccaca ctatgtaata
    29641 cggtcatact ggcctcctga tgtcgtcaac acggcgaaat agtaatcacg aggtcaggtt
    29701 cttaccttaa attttcgacg ggaaaccacg taaaaaacgt cgatttttca agatacagca
    29761 tgaattttca ggaaatgcgg tgagcatcac atcaccacaa tgaaacaaat tgtgaacatc
    29821 atcacgttca tctttccctg gttgccaatg gcccattttc ctgtcagtag cgagaaggtc
    29881 gcgaattcag gcgcttttta gactggtcgt aatgaaattc agcaggatca cattatgacc
    29941 tttcgcaatt gtgtcgccgt cgatctcggc gcatccagtg ggcgcgtgat gctggcgcgt
    30001 tacgagcgtg aatgccgcag cctgacgctg cgcgaaatcc atcgttttaa caatggcctg
    30061 cacagccaga acggctatgt cacttgggat gtggatagcc tggaaagtgc cattcgcctt
    30121 ggattaaaca aggtgtgcga ggaagggatt cgtatcgata gcattgggat tgatacctgg
    30181 ggcgtggact ttgtgctgct tgaccaacag ggtcagcgcg tgggcctgcc tgttgcttat
    30241 cgcgatagcc gcaccaatgg cctgatggcg caggcacaac agcaactcgg caaacgcgat
    30301 atttatcagc gtagcggcat acaatttcta cccttcaata cgctttatca gttgcgtgcg
    30361 ctgacggagc aacaacctga acttattcca cacattgctc acgctctgct gatgccggat
    30421 tacttcagtt atcgcctgac cggcaagatg aactgggagt acaccaatgc cacaaccacg
    30481 caactggtca atatcaatag cgacgactgg gacgagtcgc tactggcgtg gagcggggcc
    30541 aacaaagcct ggtttggtcg cccgacgcat ccgggtaatg tcataggtca ctggatttgc
    30601 ccgcagggta atgagattcc agtggtcgcc gttgccagcc atgataccgc cagcgcggtt
    30661 atcgcctcgc cgttaaacgg ttcacgcgcc gcttatctct cttctggcac ctggtcattg
    30721 atgggttttg aaagccagac gccatttacc aatgacacgg cgctggcagc caacatcacc
    30781 aatgaaggcg gggcggaagg tcgctatcgg gtgctgaaaa atattatggg cttatggctg
    30841 cttcagcgag tgcttcagga gcggcaaatc aacgatctcc cgacgcttat cgccgcgaca
    30901 caggcacttc cggcctgtcg cttcatcatc aatcccaatg acgatcgctt tattaatcct
    30961 gaagcgatgt gcagcgaaat tcaggctgcg tgtcgggaaa cggcgcaacc gatcccggaa
    31021 agtgatgctg aactggcgcg ctgtattttc gatagtctgg cgctgctgta tgccgatgtg
    31081 ttgcatgagc tggcgcagct acgcggtgaa gatttctcgc aactgcatat tgtcggcggc
    31141 ggctgccaga acacgctgct caaccagcta tgtgccgatg cctgcggtat tcgggtgatc
    31201 gccgggcctg ttgaagcctc gacgctcggc aatatcggca tccagttaat gacgctggat
    31261 gaactcaaca atgtggatga tttccgtcag gtcgtcagca ccaccgcgaa tctgaccacc
    31321 tttactccta atcctgacag tgaaattgcc cactatgtgg cgcagattca ctctacacga
    31381 cagacaaagg agctttgcgc atgaccactc aactggaaca ggcctgggag ctggcgaaac
    31441 agcgtttcgc ggcggtgggg attgatgtcg aggaggcgct gcgccaactt gatcgtttac
    31501 ccgtttcaat gcactgctgg cagggcgatg atgtttccgg ttttgaaaac ccggaaggtt
    31561 cgctgaccgg tgggattcag gctactggta attatccggg caaagcgcgt aatgccagtg
    31621 agctacgagc cgatctggaa caggctatgc ggctgattcc ggggccgaaa cggcttaatt
    31681 tacatgccat ctatctggaa tcagacacgc cagtctcgcg cgaccagatc aaaccagagc
    31741 acttcaaaaa ctgggttgaa tgggcgaaag ccaatcagct cggtctggat tttaacccct
    31801 cctgtttttc gcatccgcta agcgccgatg gctttacgct ctcgcatgcc gacgacagca
    31861 ttcgccagtt ctggattgat cactgcaaag ccagccgccg tgtttcggcc tattttggcg
    31921 agcaactcgg cacgccgtcg gtgatgaaca tctggatccc ggatggcatg aaagatatca
    31981 ccgttgaccg tctcgctccg cgtcagcgtc tgctggctgc tctggatgag gtgatcagcg
    32041 agaagctgga tccggcacac catatcgacg ccgttgagag caaattgttt ggcattggtg
    32101 cggagagtta caccgttggc tccaatgagt tttacctggg gtatgccacc agccgacaga
    32161 cggcgctgtg cctggacgcc gggcatttcc acccgactga agtgatttcc gacaagattt
    32221 ccgccgccat gctgtatgtg ccgcagttgc tgctgcacgt cagccgtccg gttcgctggg
    32281 acagcgatca cgtagtgctg ctggatgatg aaacccaggc aattgccagt gagattgtgc
    32341 gtcacgatct gtttgaccgg gtgcatatcg gccttgactt cttcgatgcc tctatcaacc
    32401 gcattgccgc gtgggtcatt ggtacacgca atatgaaaaa agccctgctg cgtgcgttgc
    32461 tggaacctac cgctgagctg cgcaagctgg aagcggcggg cgattacact gcgcgtctgg
    32521 cactgctgga agagcagaaa tcgttgccgt ggcaggcggt ctgggaaatg tattgccaac
    32581 gtcacgatac cccaacgggt agcgaatggc tggagagcgt gcgggcttat gagaaagcga
    32641 ttttgagcca gcgtgggtaa acgcgctagc gccttatccg gcctacgggt cgaatgtcca
    32701 tgcgggctgt caccctcacc ccggtcctct ccctgaaagg gcgagggaga aaaacatagc
    32761 ctcgtgcggc aacggagctg aacaccgctc cggacagtcc cctcgcccct acggggagag
    32821 ggttagggtg aggggaacaa gccgcaccat gtctaaacaa ggcaacctaa tttacaggaa
    32881 cacagaacat gcaaaacatt acccagtcct ggtttgtcca gggaatgatc aaagccacca
    32941 ccgatgcctg gctgaaaggc tgggacgagc gcaacggcgg caacctgacg ctgcgcgtgg
    33001 atgacgccga tatcgcgcct tataaagaca acttccatgc acaaccgcgc tatatcccgc
    33061 tcagccagcc catgccttta ctggcaaata caccgtttat tgtcaccggc tccggcaaat
    33121 tcttccgtaa cgtccagctt gatcctgcag ctaacttagg cgtcgtaaaa gtcgacagcg
    33181 acggcgcggg ctaccatatt ctctgggggt taaccaacga agccgtcccc acatccgaac
    33241 ttccggctca cttcctttcc cactgcgagc gtattaaagc caccaacggt aaagatcggg
    33301 tgatcatgca ctgccacgcc accaacctga tcgccctcac ctatgtactg gaaaacgaca
    33361 ccgcggtctt tactcgccaa ctgtgggaag gcagcaccga gtgtctggta gtgttcccgg
    33421 atggcgttgg cattttgccg tggatggtgc ccggcacgga cgaaatcggc caggcgaccg
    33481 cacaagagat gcaaaaacat tcgctggtgt tgtggccctt ccacggtgtg ttcggttccg
    33541 gaccgacgct ggatgaagcc tttggtttaa tcgacaccgc agaaaaatca gcacaagtat
    33601 tagtgaaggt ttattcgatg ggcggcatga aacagaccat cagccgtgaa gagttgatag
    33661 cgctcggcaa gcgcttcggc gttacaccac tagccagtgc gctggcgctg taaggagcaa
    33721 acatgatccg caaagccttt gtcatgcagg ttaaccccga cgcccacgaa gagtatcaga
    33781 gtcggcataa ccccatctgg ccggaactgg aagcagtgtt gaaatctcac ggtgcgcata
    33841 actacgccat ttacctcgac aaagcgcgta atctgctgtt tgccatggta gagattgaat
    33901 ctgaagaacg ctggaatgcg gttgccagta ctgatgtttg ccaacgttgg tggaaatata
    33961 tgaccgatgt tatgccagct aatgcggata acagcccggt gagtagcgag ctgcaagaag
    34021 tgttttacct gccgtaattg cccaatgtgc cggagatgcc tccggcacaa tattttaaat
    34081 ttcgatttga aaaattaaac atattacatc tcccggtaag ttatatttcc ctgatacatt
    34141 gtgagtaaat cacaaaaata atgaataacc cattaatgat tcatgtggtt tatttaaata
    34201 accattatgt gcattactcc gcaaatctga cctttcactc tgtctcaaat tgtcattgtt
    34261 taccgacata tcgcctctca tcacttaatc gctccaccat tacaattgat taaaatatat
    34321 tttatggagt ccgattaatg gcagctctta ctgcaagctg tattgacctg aatattcagg
    34381 gcaatggcgc ttattccgtt ctgaagcagt tggcgacaat agcgttacaa aacggtttta
    34441 tcaccgactc acaccagttc ctgcaaaccc tgctgctgcg cgaaaaaatg cactctactg
    34501 gatttggttc cggtgtcgcc gtgccgcacg gtaaaagcgc ctgcgttaaa caaccgttcg
    34561 tgttattcgc ccgcaaagcg caggctattg actggaaagc cagcgatggc gaagacgtca
    34621 attgctggat ctgcctcggc gtgccgcaaa gcggcgaaga ggatcaggtc aaaatcatcg
    34681 gcacactgtg tcgcaaaatt attcaccagg aatttattca tcaactgcaa cagggcgata
    34741 ccgaccaggt gcttgccttg ttaaatcaaa ccctcagctc ataaggaagt ggcgatggag
    34801 tcatccttac gtattgtcgc gatcaccaac tgccccgccg ggatcgctca cacctacatg
    34861 gtggcggaag ccctggaaca gaaagcccgt tctctcggcc ataccattaa agtggaaact
    34921 caagggtcca gtggcattga aaaccgctta tccagcgaag agattgccgc tgccgattac
    34981 gtcattctcg ctaccgggcg tggcctgagc ggtgatgatc gcgcgcggtt tgccgggaag
    35041 aaagtttatg agattgtcat ctcccaggcg ttgaaaaata tcgaccagat tttcagcgaa
    35101 ttaccgacaa attcgcagct ttttgccgca gatagcggcg tgaagctagg caaacaggaa
    35161 gtacaaagcg gcagcgtgat gagccacctg atggcgggcg tctctgcggc gctgccgttt
    35221 gttatcggtg gcggtatcct ggtggcgctt gccaacatgc tggtgcagtt cggtttgcca
    35281 tataccgata tgtcgaaagg cgcgccgtcg tttacctggg tagttgaatc catcggttac
    35341 cttggcttca cctttatgct ccccatcatg ggcgcttata ttgcctcgtc gattgccgat
    35401 aaaccggctt tcgctccggc gtttctggtt tgctatctgg cgaacgacaa agcgctgctc
    35461 ggcacccagt cgggtgcggg attcctcggc gcggtggtgc tggggctggc gattggctat
    35521 ttcgtcttct ggttccgcaa agtgcgcctt ggcaaagcat tacaaccgct gctcggttca
    35581 atgcttatcc cattcgttac tctgctggtt tttggcgtgc tcacttacta cgttatcggg
    35641 ccggtgatgt ccgacctcat gggcgggctg ctccacttcc tgaataccat tcctccatca
    35701 atgaagtttg cggcagcgtt tctggtcggt gcgatgctgg cgttcgatat gggcggcccc
    35761 atcaataaaa ccgcctggtt cttctgcttc tcgctgctgg aaaaacacat ttacgactgg
    35821 tacgccatcg tcggcgttgt cgcgttgatg ccgcccgtcg cggcgggtct tgcgacgttc
    35881 attgcgccca aactgtttac ccgacaggaa aaagaggctg ccagtagtgc cattgtggtc
    35941 ggtgccacag tcgcaaccga accggcgatt ccttacgctc tggcagctcc gttgccgatg
    36001 attaccgcca atacgctggc gggcggcatt accggcgtgc tggtgatcgc tttcggaatc
    36061 aaacgtctgg cacctggttt gggtatcttt gacccgctga tcggcctgat gtcgccggta
    36121 ggttcgtttt atctggtgct ggcgattggc ctcgcgctga acatttcatt cattatcgtc
    36181 ctgaaaggat tgtggttacg ccgcaaagcg aaagccgcgc aacaggagct tgtccatgaa
    36241 cattgagtta ctgcaacagt tgtgcgaagc cagcgccgtt agcggcgatg aacaggaagt
    36301 tcgcaacatc ctgataaaca cgctggaatc ctgcgtgaat gaaatcacct ttgatggtct
    36361 gggcagcttt gttgcccgta aggggaataa aggtccaaaa gttgccgttg tcgggcatat
    36421 ggatgaagtc ggctttatgg tcacccacat cgacgagagc ggttttctgc gttttaccac
    36481 cattggcggc tggtggaatc agtcgatgct caaccaccgg gtaaccatac gcacacacaa
    36541 gggatttaaa atccctggtg tgattggttc cgtcgcgcct catgcgttaa ccgaaaagca
    36601 aaagcaacaa ccgctgtcat ttgatgagat gttcattgat attggcgcga acagtcgcga
    36661 agaagcggaa aagcgcggcg tggaagaaga agttgggcta cgcggggcac aaacctcggc
    36721 ggaacacatt aaaccggacg tcgtgatcgt gttggatacc gccgtagcgg gcgatgttcc
    36781 gggcattgat aacataaaat acccgctgaa actgggccag gggccggggc tgatgctgtt
    36841 tgacaagcgc tacttcccca accagaaact ggtggcggcg ttaaaaagct gtgccgcaca
    36901 taacgattta ccgctgcaat tttccaccat gaaaaccggt gcgacggatg gcgggcgcta
    36961 caacgtgatg ggcggcgggc gtccggttgt cgcgctgtgt ctgccaactc gttatctgca
    37021 cgccaacagc ggtatgattt caaaagccga ttatgatgct ctgctcacgc tgatacgggg
    37081 ttttctgacc accttaaccg cggagaaagt caacgcgttt agccagttcc gtcaggtgga
    37141 ttaatgctaa acgaacgcca gttaaagatt gtcgatctgc tggagcaaca gccgcgcacg
    37201 cctggcgagc tggcgcaaca gactggcgtt tcaggcagga ccatcctgcg tgatattgac
    37261 tatctcaact ttacccttaa cggcaaagcc cgcattttcg ccagtggcag tgcgggctat
    37321 cagctggaaa tcttcgagcg ccgcagcttt tttcagttgc tgcaaaagca cgataacgac
    37381 gatcggctgc tggcgctgtt attactgaat acctttactc cccgtgcgca actcgcctcg
    37441 gcgcttaatt tgccagaaac ctgggtagca gagcgtctgc cccggttaaa acagcgttat
    37501 gaacgcactt gttgcctggc cagtcgcccc ggtttgggcc atttcattga tgagacagaa
    37561 gagaaacgcg ttatcttgct ggcgaacttg ctgcgcaaag atccattttt aattccgctg
    37621 gcgggcgtaa cacgagacaa ttttcagcat ttatccacgg cctgcgacaa ccaacaccgc
    37681 tggccgctca tgcagggtga ttatctctcc agcctgattc tggcgattta cgccctgcgt
    37741 aatcaactga ccgatgagtg gccgcaatat cccggtgacg agataaaaca aatcgttgaa
    37801 cagagcggcc tgtttcttgg tgataacgct gtaagaaccc tgacgggttt gatagagaaa
    37861 cagcatcagc aagcgcaggt aatatctgcc gataatgtgc aggggttgct gcaaatggtg
    37921 ccgggcatcg cgtcattgaa tattattgat atgcagctgg ttgagaatat taccgggcat
    37981 ttattacgtt gccttgccgc accagtatgg attgctgagc accgccaaag cagcatgaat
    38041 aacctgaaag ccgcctggcc tgcggccttt gatatgagtc tgcactttat tacgctactg
    38101 cgtgaacagc tcgatattcc ccttttcgac agcgatctga tcggtttgta ttttgcctgt
    38161 gcgctggaac ggcatcaaaa cgaacgccag ccgatcattt tgctctcgga ccagaacgcg
    38221 attgccacta ttaatcagct cgccattgag cgcgatgttt taaattgtcg ggtaattatt
    38281 gcccgtagct taagcgaact tgttgccatt cgcgaagaga ttgagccgtt attgatcatt
    38341 aacaacagcc attatttact ggatgacgcg gtaaataatt acatcaccgt aaaaaatatc
    38401 attacggctg ccggtatcga acaaataaaa cattttctgg cgacggcatt tattcgccag
    38461 caaccggagc gttttttctc tgcccccgga agttttcatt attcgaatgt acgcggtgaa
    38521 agctggcaac atattacccg gcaaatttgt gcgcaattag tggcacaaca ccatattacc
    38581 gccgatgaag cacaacgcat catcgcccgc gaaggcgaag gtgaaaacct gattgttaat
    38641 cgtctcgcca tcccacattg ctggagcgaa caggagcgac gttttcgtgg attttttatt
    38701 accctcgccc aaccagttga ggtgaataac gaagtcatta accatgtctt gatcgcctgc
    38761 gccgccgccg atgcgcgtca tgagttgaaa atattcagct atcttgccag cgtcctgtgt
    38821 cagcatccgg cggagactat tgtcggacta acggggtatg aagggtttat ggcattactt
    38881 cgctaggggt gaatgttgtc ggatgcaccg ctaacacggc ttaacgacgt ttaggtcgga
    38941 taaggcgttt acgccgcatc cgaccttgta tttctcagca aaaacaaaaa cgtttaacgt
    39001 aggcgattat aatcatcgac catttcgttg tactcgcgta atgctctcgg gaaagagtcg
    39061 tcgaccatcc agcttgagtt tgcgtcctgc agttgctctt tatcccagtc agagtacggg
    39121 actttatctc tgacgcggcg aacgtatttt ttag
//
LOCUS       DAJVTL010000023        38419 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.023, whole genome shotgun sequence.
ACCESSION   DAJVTL010000023 DAJVTL010000000
VERSION     DAJVTL010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 38419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38419
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.023"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..849
                     /gene="potE"
                     /locus_tag="OQQ26_001155"
     CDS             <1..849
                     /gene="potE"
                     /locus_tag="OQQ26_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine-ornithine antiporter"
                     /protein_id="HCS1856684.1"
                     /translation="IIPVVGLCVIGWFWFSPTLYVDSWNPHHAPFFSAVGSSIAMTLW
                     AFLGLESACANTDVVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTA
                     PFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVT
                     KVDAPVQGMLTIVIIQSGLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQ
                     KVANVPPSKAKVANFVAFVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFE
                     LKNKHG"
     gene            complement(905..2545)
                     /gene="pgm"
                     /locus_tag="OQQ26_001156"
     CDS             complement(905..2545)
                     /gene="pgm"
                     /locus_tag="OQQ26_001156"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HCS1856685.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI
                     VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(2571..3116)
                     /gene="seqA"
                     /locus_tag="OQQ26_001157"
     CDS             complement(2571..3116)
                     /gene="seqA"
                     /locus_tag="OQQ26_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HCS1856686.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
                     VTKEVRVASPAIVEVKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
                     AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
                     EHIMQSMQFPAELIEKVCGTI"
     gene            3301..4065
                     /gene="ybfF"
                     /locus_tag="OQQ26_001158"
     CDS             3301..4065
                     /gene="ybfF"
                     /locus_tag="OQQ26_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HCS1856687.1"
                     /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
                     IIQVDMRNHGLSPREPVMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALA
                     PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
                     FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLL
                     AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
     gene            4205..4498
                     /gene="ybfE"
                     /locus_tag="OQQ26_001159"
     CDS             4205..4498
                     /gene="ybfE"
                     /locus_tag="OQQ26_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415211.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HCS1856688.1"
                     /translation="MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKR
                     DKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV"
     gene            4638..5168
                     /gene="fldA"
                     /locus_tag="OQQ26_001160"
     CDS             4638..5168
                     /gene="fldA"
                     /locus_tag="OQQ26_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HCS1856689.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQISEELHLDEILNA"
     gene            5378..5464
                     /gene="uof"
                     /locus_tag="OQQ26_001161"
     CDS             5378..5464
                     /gene="uof"
                     /locus_tag="OQQ26_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fur leader peptide"
                     /protein_id="HCS1856690.1"
                     /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD"
     gene            5457..5903
                     /gene="fur"
                     /locus_tag="OQQ26_001162"
     CDS             5457..5903
                     /gene="fur"
                     /locus_tag="OQQ26_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HCS1856691.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
     gene            complement(5987..6313)
                     /locus_tag="OQQ26_001163"
                     /pseudo
     CDS             complement(5987..6313)
                     /locus_tag="OQQ26_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308740.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6363..7769)
                     /gene="chiP"
                     /locus_tag="OQQ26_001164"
     CDS             complement(6363..7769)
                     /gene="chiP"
                     /locus_tag="OQQ26_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HCS1856692.1"
                     /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG
                     IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAEN
                     GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
                     APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV
                     DYLHSLGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD
                     KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPTYAS
                     SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQS
                     NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI
                     FQDERDVKFMVIAPFTIF"
     gene            8027..8194
                     /locus_tag="OQQ26_001165"
     CDS             8027..8194
                     /locus_tag="OQQ26_001165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856693.1"
                     /translation="MKAVTFYLIMFCDFKFILWINCEAELIREEKQKKRRRARRLGLF
                     AIVCYFLPDAA"
     gene            complement(8357..10021)
                     /gene="glnS"
                     /locus_tag="OQQ26_001166"
     CDS             complement(8357..10021)
                     /gene="glnS"
                     /locus_tag="OQQ26_001166"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HCS1856694.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
                     LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRE
                     DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRAD
                     FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPANG
                     RKVKGVIHWVSAAHALPVEIRLYDRLFNVPNPGAADDFLSVINPESLVIKQGFAEPSL
                     KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
     gene            complement(10280..12226)
                     /gene="nagE"
                     /locus_tag="OQQ26_001167"
     CDS             complement(10280..12226)
                     /gene="nagE"
                     /locus_tag="OQQ26_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HCS1856695.1"
                     /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
                     GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
                     ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLVAIFGYVWPPVQHAIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
                     TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
                     QNVWMLLVMGVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQL
                     ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDAMCKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGD
                     VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
                     VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
                     FSGLIIKAQGHVVAGQTPLYEIKK"
     gene            12559..13359
                     /gene="nagB"
                     /locus_tag="OQQ26_001168"
     CDS             12559..13359
                     /gene="nagB"
                     /locus_tag="OQQ26_001168"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HCS1856696.1"
                     /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
                     PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG
                     CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
     gene            13419..14567
                     /gene="nagA"
                     /locus_tag="OQQ26_001169"
     CDS             13419..14567
                     /gene="nagA"
                     /locus_tag="OQQ26_001169"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HCS1856697.1"
                     /translation="MYALTQGRIFTGYEFLDDHAVVIADGLIKSVCPVAELPPEIEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
                     SDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
                     ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
                     NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
                     ATLYPARAIGVEKRLGTLAAGKIANLTAFTPDFKITKTIVNGNEVVTQ"
     gene            14576..15796
                     /gene="nagC"
                     /locus_tag="OQQ26_001170"
                     /gene_synonym="nagR"
     CDS             14576..15796
                     /gene="nagC"
                     /locus_tag="OQQ26_001170"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HCS1856698.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
                     FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
                     DSSKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN
                     PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
                     AMLNGILLQHLLEN"
     gene            15844..16595
                     /gene="nagD"
                     /locus_tag="OQQ26_001171"
                     /pseudo
     CDS             15844..16595
                     /gene="nagD"
                     /locus_tag="OQQ26_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308732.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
     gene            16992..18656
                     /gene="asnB"
                     /locus_tag="OQQ26_001172"
     CDS             16992..18656
                     /gene="asnB"
                     /locus_tag="OQQ26_001172"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HCS1856699.1"
                     /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
                     ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
                     ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS
                     EMKALVPVCRTIKEFPAGSYLWRQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
                     SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP
                     SSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAQQVSDQQLETAHFRFPYNTPTSKEAYLYREIFEELFPL
                     PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK"
     gene            19037..19110
                     /locus_tag="OQQ26_001173"
     tRNA            19037..19110
                     /locus_tag="OQQ26_001173"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19071..19073,aa:Met,seq:cat)
     gene            19124..19208
                     /locus_tag="OQQ26_001174"
     tRNA            19124..19208
                     /locus_tag="OQQ26_001174"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19158..19160,aa:Leu,seq:tag)
     gene            19232..19306
                     /locus_tag="OQQ26_001175"
     tRNA            19232..19306
                     /locus_tag="OQQ26_001175"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19264..19266,aa:Gln,seq:ttg)
     gene            19341..19415
                     /locus_tag="OQQ26_001176"
     tRNA            19341..19415
                     /locus_tag="OQQ26_001176"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19373..19375,aa:Gln,seq:ttg)
     gene            19431..19507
                     /locus_tag="OQQ26_001177"
     tRNA            19431..19507
                     /locus_tag="OQQ26_001177"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19465..19467,aa:Met,seq:cat)
     gene            19556..19630
                     /locus_tag="OQQ26_001178"
     tRNA            19556..19630
                     /locus_tag="OQQ26_001178"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19588..19590,aa:Gln,seq:ctg)
     gene            19668..19742
                     /locus_tag="OQQ26_001179"
     tRNA            19668..19742
                     /locus_tag="OQQ26_001179"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19700..19702,aa:Gln,seq:ctg)
     gene            complement(19958..21133)
                     /gene="ubiF"
                     /locus_tag="OQQ26_001180"
     CDS             complement(19958..21133)
                     /gene="ubiF"
                     /locus_tag="OQQ26_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706550.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
                     hydroxylase"
                     /protein_id="HCS1856700.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFIA
                     DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVMFDAAELKL
                     PLLGYMVENTVLQQALWQALEAHPKVTLRVPTSLIALHRHDDLQELELKGGETIRAKL
                     VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
                     FDNWASLVWYDSPVRIRQLQNMNMAQLQTEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
                     QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
                     QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
     gene            21279..22703
                     /gene="miaB"
                     /locus_tag="OQQ26_001181"
     CDS             21279..22703
                     /gene="miaB"
                     /locus_tag="OQQ26_001181"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HCS1856701.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENDLGVGYYQP"
     gene            22856..23896
                     /locus_tag="OQQ26_001182"
     CDS             22856..23896
                     /locus_tag="OQQ26_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HCS1856702.1"
                     /translation="MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRD
                     NHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESV
                     PEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
                     ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIER
                     NVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDL
                     PRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAAL
                     AAERKREEQEQK"
     gene            23893..24360
                     /gene="ybeY"
                     /locus_tag="OQQ26_001183"
     CDS             23893..24360
                     /gene="ybeY"
                     /locus_tag="OQQ26_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014169133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HCS1856703.1"
                     /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTVR
                     VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
                     PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE"
     gene            24450..25328
                     /gene="corC"
                     /locus_tag="OQQ26_001184"
     CDS             24450..25328
                     /gene="corC"
                     /locus_tag="OQQ26_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308723.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HCS1856704.1"
                     /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
                     SIEDFNEAFSTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVKIPDDSPQPKLDE"
     gene            25353..26891
                     /gene="lnt"
                     /locus_tag="OQQ26_001185"
     CDS             25353..26891
                     /gene="lnt"
                     /locus_tag="OQQ26_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HCS1856705.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
                     QALTFNRRPLQSAAIGFGWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS
                     LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
                     KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
                     EKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
                     QQPFLKALDGELRDKGSTLVTGIVDARLNKQNLYDTYNTIITLGKGAPYSYESADRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARTRALELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
                     ARKR"
     gene            complement(26969..28805)
                     /locus_tag="OQQ26_001186"
                     /pseudo
     CDS             complement(26969..28805)
                     /locus_tag="OQQ26_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276742.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
     gene            29260..30169
                     /gene="gltI"
                     /locus_tag="OQQ26_001187"
                     /pseudo
     CDS             29260..30169
                     /gene="gltI"
                     /locus_tag="OQQ26_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308721.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter
                     substrate-binding protein GltI"
     gene            30339..31066
                     /gene="gltJ"
                     /locus_tag="OQQ26_001188"
                     /pseudo
     CDS             30339..31066
                     /gene="gltJ"
                     /locus_tag="OQQ26_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415187.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
     gene            31066..31740
                     /gene="gltK"
                     /locus_tag="OQQ26_001189"
     CDS             31066..31740
                     /gene="gltK"
                     /locus_tag="OQQ26_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HCS1856706.1"
                     /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
                     RLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
                     AFSMFEAAYYSEIIRAGIKSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIDERDGTQVEMILFAGFVYFVISLSASLLVSY
                     LKRRTA"
     gene            31740..32465
                     /gene="gltL"
                     /locus_tag="OQQ26_001190"
     CDS             31740..32465
                     /gene="gltL"
                     /locus_tag="OQQ26_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HCS1856707.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
                     PKDAFFDDPKSDRAKDFLAKILH"
     gene            32583..33518
                     /gene="rihA"
                     /locus_tag="OQQ26_001191"
     CDS             32583..33518
                     /gene="rihA"
                     /locus_tag="OQQ26_001191"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HCS1856708.1"
                     /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK
                     TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
                     TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAE
                     LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVV
                     DYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA"
     gene            33602..35272
                     /gene="hscC"
                     /locus_tag="OQQ26_001192"
     CDS             33602..35272
                     /gene="hscC"
                     /locus_tag="OQQ26_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscC"
                     /protein_id="HCS1856709.1"
                     /translation="MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS
                     MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL
                     KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL
                     HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRA
                     DVARTTLNESELAALYACVEAAKCSNQSPMHIRWQYQDETRECEFYENELEDLWLPLL
                     NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV
                     ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV
                     ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL
                     LEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEE
                     LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP"
     gene            complement(35332..36783)
                     /gene="djlC"
                     /locus_tag="OQQ26_001193"
     CDS             complement(35332..36783)
                     /gene="djlC"
                     /locus_tag="OQQ26_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlC"
                     /protein_id="HCS1856710.1"
                     /translation="MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQ
                     AYEEALRLAVNPVEEADNEDKDAAAEHEILRAFRALLDSESDRFQPSAWQKFIQQLNT
                     WNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNRHSFNDSEGMDEEEREAFLEAI
                     QAGDCFDFLSLLEYPVALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDVKL
                     HRKLLRWYSSVQTGMVELIPVAKQWQAEEPESEDARYYQCAQRLYCGEGESLLAELCA
                     YWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEAQSMVDAQGQSLKYVPGESAWTRL
                     LWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEQDSPLLDLYRVAEQVGL
                     EAFPKQEMLARLNTRLEGGDAHPLEAIVTRMLLTKVKLEPEDEDVYEPTPENHEEIHD
                     EDEKPQSITSIIKISLTVLVIGYALGKIAMLFS"
     gene            complement(36780..37487)
                     /locus_tag="OQQ26_001194"
     CDS             complement(36780..37487)
                     /locus_tag="OQQ26_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HCS1856711.1"
                     /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFDLSSS
                     WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFV
                     AQTAMCCGEGGIKAWDYVRMGFLSRGGVLNNWLTEEESLWLQSRVYVRAHHYYHSWMH
                     YFSAYSLGRLYWQSSQCEDNASLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQP
                     LTVQPECPVTLKDVSDL"
     gene            37589..38143
                     /locus_tag="OQQ26_001195"
     CDS             37589..38143
                     /locus_tag="OQQ26_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HCS1856712.1"
                     /translation="MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSP
                     GSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRA
                     QSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQ
                     KWLKLAAKQHYKNAERLLAGLPAH"
     gene            complement(38153..>38419)
                     /locus_tag="OQQ26_001196"
     CDS             complement(38153..>38419)
                     /locus_tag="OQQ26_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HCS1856713.1"
                     /translation="ASQPTEESLMPIVSRLDAEDRCPLEALIIRRLLIQAANFTEKQT
                     VEPEPQPQPMPVDDGGPGCLGIIKIIFYIFIFAGLIGKILHLFG"
BASE COUNT         9500 a         9892 c         9617 g         9410 t
ORIGIN      
        1 attattccgg tggtaggcct gtgcgttatc ggctggttct ggtttagccc gacgctttac
       61 gttgattcct ggaatccgca tcatgcaccg ttcttcagtg cggtaggttc ttccatcgct
      121 atgacgctgt gggcttttct tggtctggag tctgcgtgtg cgaatactga tgtagtggaa
      181 aacccggaac gtaatgtgcc aatcgcggta ctcggcggta cgttaggtgc ggcggtgatt
      241 tatatcgtct ccaccaacgt gattgccggg attgtgccaa atatggagct ggcaaattca
      301 acggcaccat ttggtctggc cttcgcgcag atgttcacgc cggaagtggg taaagtcatt
      361 atggcgctga tggtgatgtc ctgctgcggt tcgctgcttg gctggcagtt caccattgcc
      421 caggtgttta aatcttcatc tgatgaaggc tacttcccta aaattttctc ccgtgtaacc
      481 aaagtggatg caccggtgca gggaatgttg accattgtga ttatccagag cgggttggcg
      541 ctgatgacga ttagcccgtc gctaaacagt cagttcaacg tgctggttaa cctggccgtg
      601 gtgaccaata tcattccgta tattctgtca atggcggcat tagtcattat tcagaaggtc
      661 gctaatgtgc ccccctcaaa agcgaaagtt gcaaactttg ttgcttttgt tggcgcgatg
      721 tatagctttt atgcgctgta ctcatccggg gaagaagcca tgctgtacgg ttccatcgtg
      781 accttccttg gttggacact gtatggtttg gtatcaccac gctttgaact gaaaaataaa
      841 cacggttaaa aaagcaaagt aaaaaagggc gatcttgcga ccgccctttt tttattaaat
      901 gtgtttacgc gtttttcaga acttcgctaa caatctcaac cgcttctttc tcaatctgct
      961 tgcgatgttc ttcaccgagg aagctttcgc agtagatctt atatgcgtct tccgtgcctg
     1021 acggacgcgc ggcgaaccag ccgttgtcag tcatcacttt cagaccgccg atagaagcac
     1081 cattacccgg tgccgccgtc agacgtgcgg tgatcgggtc acctgccagg gtgctggcgc
     1141 tcaccatttc cggagacagc ttagacaacg ccgctttttg tgcggaagtc gcagcggcct
     1201 gcaaacggtt gtagctcggc gcaccaaagc gttttgccag ttcgttgtag tgttcctgcg
     1261 ggttcttacc ggtgacagcg gtgatttccg ccgccagcag acacataatg atgccgtctt
     1321 tatcggtgga ccacggcgtg ccgtcgaaac gcaggaagga agccccggcg ctctcttcgc
     1381 cgccaaagcc gaagctgccg tcgaacagac catcaacaaa ccatttgaat cctaccggga
     1441 cttctaccag tttacggccc aagtcgttga ccacacggtc gatcatcgca gaagaaacca
     1501 gcgttttacc gacagcaaca tctttgcccc actgcggacg atgctggaac aggtagttga
     1561 tcgccaccgc caggtagtgg ttcggattca tcaaacctgc cggagtgacg ataccgtgac
     1621 ggtcataatc cgggtcgtta gcaaacgcca gatcgaactt atcacgcagt gccagcaggc
     1681 ccgccatcgc acactcggag gagcagtcca tacggatcgc gccgtcttta tcaaggtgca
     1741 taaagcggaa agtttgatcg acctgatcgt taacgatggt caggttgagg ttgtaatact
     1801 cgccaatacg cttccagtat tcgataccgg aaccgcccag cggatcaacg ccaagcgtca
     1861 ggcccgcttt ctgaatcgcc gccatatcaa cgatatcggc cagaccttcc acaaacggct
     1921 gcaccagatc ctgctctttc acatgaccgg atgccatcgc ttcgtcgaga gagatacgct
     1981 tcacgccttt caggccatcg gccagcagtg cgttggccct gtcttccacc actttggtga
     2041 cgttggtatc agccgggcca ccatttggcg ggttgtactt gataccacca tcttccggcg
     2101 ggttatggga cggtgtaatc acgataccgt ctgccagcgg gccacctttt ttattgtgaa
     2161 ccaggatggc attggaaacg gcaggcgttg gagtgaagcc attgttttcc tgcacaatga
     2221 catcaacgcc gttcgctgcc agcacttcca gtacggaaat gaacgcaggc tcggacaggg
     2281 cgtgagtatc tttacccaca tagcaagggc cagtgatgcc gtttttcgca cgctcttcag
     2341 caattgcctg agcgatcgcc agaatgtgcg gctcgttaaa gctgtggcgc gctgcactgc
     2401 cacggtgacc ggaagtaccg aatttcaccg cgtgctccgc attccctgct tctggtttca
     2461 gtacataata ttgcgccgtc agttgggcga cgttaatcaa atcactctgt tgtgcaggtt
     2521 ggcctgcacg gttgtggata gccattgctt tgtcctttat ctgcaacgtt ttagatagtt
     2581 ccgcaaacct tctcaatcaa ttccgccggg aattgcatcg actgcatgat gtgttcgatc
     2641 atgctgcatt tacggccggt gttggtgttg gtgatcaccc aatacggcgt accaggcaca
     2701 tgtttcggct tggtctgatt accatttttc agcagcgttt gttcatctgc cgcaaagtaa
     2761 acgcgtgtac gaccgtgcaa cgattccgtt gcttcggcaa acgcctgggc gtcaagagaa
     2821 tatagtgtag acaacagcag cataaagcga ttgaccgctc gcttttgctc tgcgtattca
     2881 tccgaaagca gaagttcacg cattgcgcga accttgtctt taatcgtttt gaccggcttc
     2941 acttcgacga tagcaggtga cgcaacgcga acctctttcg tcaccggagc agcaggctgt
     3001 gatgcggcgg aaaatttcaa catacgccgt aaaatgtcgg atgcgctctc gccgatatgc
     3061 ttagtgtggc tggcaatata gctgtagagt tcatcatcaa cttcaatcgt tttcatctta
     3121 atccagtgca gtgtcttagc tgaatacaag tcgccaagag tatatgaata aatcccggca
     3181 gcggatagcg tcaagcctgg cttgcagaaa aactcggaat aaaccttatt tgttgcagcc
     3241 ctgtggcaca acggtcaaca taatacccta acccgacaac gcgaaaaaaa gaactttgcc
     3301 atgaaattga atatccgcgc gcaaactgca caaaaccagc acaataattc tcccatcgtt
     3361 cttgtccacg gtctgtttgg tagcctcgac aaccttggcg tactggctcg cgatctggta
     3421 aacgatcaca atatcatcca ggttgatatg cgtaaccacg gtctttcacc gagagagccg
     3481 gtaatgaatt acccggcgat ggcgcaggat cttgttgata ccctggatgc actgcagatc
     3541 gacaaagcaa catttatcgg tcactccatg ggcggtaaag cggtaatggc acttactgca
     3601 ctggcccccg atcgcatcga taaactggtg gcgatcgata tcgcaccggt cgactatcac
     3661 gtacgccgtc atgatgagat tttcgcagct atcaacgcgg tcagtgaatc ggacgcacaa
     3721 actcgccagc aagcagcagc aataatgcgc cagcatctta atgaagaagg ggtgattcag
     3781 tttctgttga aatcttttgt tgacggggag tggcgcttta acgtgccggt attgtgggat
     3841 cagtatccgc atattgtggg ttgggagaaa atcccggcat gggatcaccc tgccctgttt
     3901 atccctggcg gcaattctcc gtatgttagc gagcagtacc gtgatgattt actggcacaa
     3961 tttccacagg cacgggcgca tgtgattgca ggcgcgggtc actgggtcca tgctgaaaaa
     4021 ccggatgcgg tattacgcgc tatccgtcgc tatctcaatg attaacgcaa ctgattaaaa
     4081 acccagcgtc cgcgtcgctt tccgcgcgtg ggcgttggcg tgactcatcg cgctgatgta
     4141 ttatggcgcg ctatccatcc gggcagaggc ctggctgatt gtttcccccg aagtcaccaa
     4201 gatcatggcc aaagaacaaa cggaccgtac gacattagat ctgttcgcgc acgagcgtcg
     4261 accgggacga ccgaaaacta atccgctttc gcgcgatgaa cagctgcgta ttaataaacg
     4321 caaccagcta aaacgcgaca aagtacgtgg ccttaagcgt gtcgaactga agctgaacgc
     4381 ggaagctgtc gaggcgctga acgagctggc ggaatcgcgt aatatgagcc gtagcgaact
     4441 gatcgaagag atgttaatgc agcaactggc ggcgctgcgt agtcagggca tcgtttaaat
     4501 ttccactttc atgtagcaca gtgtgcagtc ctgctcgttt gctgattccg caagactgcc
     4561 tgttctgcta tgattgcctt tatccgtggg caattttcca cccccatttc aataagtttc
     4621 aagaggttat ttcactcatg gctatcactg gcatcttttt cggcagcgac accggtaata
     4681 ccgaaaatat cgcaaaaatg attcaaaaac agcttggtaa agacgttgcc gatgtccatg
     4741 acattgcaaa aagcagcaaa gaagatctgg aagcttatga cattctgctg ctgggcatcc
     4801 caacctggta ttacggcgaa gcgcagtgtg actgggatga cttcttcccg actctcgaag
     4861 agattgattt caatggtaaa ctggttgcgc tgtttggttg tggtgaccag gaagattacg
     4921 ccgaatattt ctgcgacgca ttgggcacca tccgcgacat cattgaaccg cgcggtgcaa
     4981 ccatcgttgg tcactggcca actgcgggct atcatttcga agcatcaaaa ggtctggcag
     5041 atgacgacca ctttgtcggt ctggctatcg acgaagaccg tcagccggaa ctgaccgctg
     5101 aacgtgtaga aaaatgggtt aaacagattt ctgaagagtt gcatctcgac gaaattctta
     5161 atgcctgatg tgatgcggcg tagactcatg tctacgccgt attaatagat aatgccaatc
     5221 aaaataattg ctacaaattt gtaacttttg ctgttgtacc tgtacaatgt cccggtgttc
     5281 aagtggcctt gccgttgtaa atgtaagctg tgccacgttt ttattaacaa tatttgccag
     5341 ggacttgtgg ttttcattta ggcgtggcaa ttctataatg atacgcatta tctcaagagc
     5401 aaattctgtc acttcttcta atgaagtgaa ccgcttagta acaggacaga ttccgcatga
     5461 ctgataacaa taccgcccta aagaaagctg gcctgaaagt aacgcttcct cgtttaaaaa
     5521 tcctggaagt tcttcaggag ccggacaacc atcacgtcag tgcggaagat ttatacaaac
     5581 gtctgatcga tatgggtgaa gaaattggtc tggctacggt atatcgcgta ctgaaccagt
     5641 ttgacgacgc tggtatcgtc acccgccaca attttgaagg cggtaaatcc gtatttgaac
     5701 tgacacagca acatcaccac gatcacctga tttgcctcga ctgcggcaag gttatcgaat
     5761 ttagtgatga ttccatcgaa gcgcgtcagc gtgaaattgc cgcaaaacat ggcattcgcc
     5821 tgactaacca cagtctctat ctttacggtc actgtgccga aggcgattgc cgcgaagatg
     5881 agcacgcgca cgaaggcaaa taagccagcc tgaacgagaa aagccaacct gcgggttggc
     5941 ttttttatac aagggaaata agaaaagcga gagttacagc tctcacttat ttgttattac
     6001 tgcgtatttc ctgccagacc ttatcacaat cggctttcac cgcctgatca tttccggttt
     6061 gcgttgcacg cagacactgc tgataatcca gtacgcgtac actttcctag tcggcaaact
     6121 gctgatgttg tttctctttc ttcagcacgt ttaacacgct ctggcaggct tcaatttttt
     6181 ctggcgaacc ttgcgcggtg ttgatacagg cgctgtatgc ctctttcaga cggctgtctt
     6241 cctgtggtgc ggttgattgc gcacaagcta ccagccccga tgccatcatg gcgatgagaa
     6301 tcagtttttt cattgaaaat tcctcaaacg tgcggcaggc acaaaacctg ccgcgtcggg
     6361 catcagaaga tggtgaatgg tgcgattacc ataaatttca cgtcacgctc atcctggaag
     6421 atgttaccgt aaccgccgcc ccagcttggg atgtcggagt ggttgtcgta ttcggtgaag
     6481 tgcagtttga acatcgtgcc tttggcgcga ccgtcctgaa tggtgtagac cgcatccagg
     6541 ctgtaggcag actcttcaat agtccggttt ttgtcgtagt acgcatccgg attgctctgc
     6601 caggtcgcag gtttagcatc ccatgcgtaa acgtaggaag cgccgatggc gaagcctgga
     6661 agattccagt ttttcaggtc atacatcgca ccgaagaaga ccgctttttc gccgttggcg
     6721 ttgaagtcag aacggttatc ccaccagata tccaggcgac cgtttgagga agcgtaggtt
     6781 ggagtcatac gttgcaggaa gtatccctgc tgaccgtcag ccttaaccca ggtgccttcg
     6841 aggcgcaaat ccactacgtc agccgcccgg taaccaaagg tcaacgcttg cagccaagcg
     6901 gtgccatcat aaagatcgtt gacgctgcga tcgtcaactt tatcgcgggt accgtagaac
     6961 tggtagctgg tggttaacgg gctaccggcg atatcaaatt tgtagctggc tttggcaaaa
     7021 tattgatcga tatacccttc cgcctgacca aatgctgctt ccagtacgaa gttatttttg
     7081 aagtcgtatt tcgccccaag ggagtgcaga taatcaactt tggtggtttt atcgttctga
     7141 taaaactcat ccatttccag atgccatggt gctttgtatt cattggtcca catgtaggag
     7201 aaactcaacg caccagcatc gccgtaatca aaattcgccc cggcttccgc cccctgataa
     7261 gtacctggca taaagctcca gtgcggcgct aacagcgttt gaccagttgg ctgaatgtaa
     7321 cctgccctcg cccaaaccgg accgtattta aatttggccg cagctttata caggcttata
     7381 ccgcttttgt cgccggacca gtcttcgtca taggctttat tactttttga aaacgcgatt
     7441 tcgttcgggt gggagctgtc gccgttttcc gccatttcaa tcgccgtaaa cgcagcaata
     7501 tcaaggccga acatatcagc agcataaccg gactgaaaat cgaggttggc attccaggtg
     7561 gagtgagaaa ggttggtttt gtatttgtcg ccgtcggtaa catctttacg gtcgcgttca
     7621 cgctgccagt aatagatacc gccggttaag gttgaatcgt cgatgaatcc ttcggcgcga
     7681 gcctccggca ttgccataaa gcccgacatt gctgtaacac cggcgatagc cagcgccagc
     7741 gtactacgtt tgccactaaa cgtacgcatg ggttaatcct ctttgacgta taaattgctg
     7801 caccaaaggt gaacagcaaa aaaaataaaa attaaaaaag tagcgttgag aaaagtctcg
     7861 ctgactacag gaacagacta ttttcgcgac gcgaattatc aatctctttc tgtaaccaga
     7921 atgtaagaac atgagcaacc gcacatattt tgatgatttt tgttacaagg cttaagtttg
     7981 cggttgaaag gcttgcagaa gaataaaagc gtgaaattcc agcaagatga aagcggttac
     8041 attttattta attatgtttt gtgattttaa atttatttta tggataaatt gcgaagcgga
     8101 attaattcgc gaagaaaagc agaaaaaacg ccgcagagcg cggcgtttgg gattgtttgc
     8161 tattgtttgc tatttcttgc cggatgcggc gtgaacgcct tatccggcct acaaaagcac
     8221 gcaaactcaa tatattgcag agatcatgta ggcctgatta agcgtagcgc atcaggcaat
     8281 ttagcgtttg aaactgtttg tctgttcctt gccggatgcg acgcaaacgc cccatccggc
     8341 atagcgaaac ttaaaattac tcgcctactt tcgcccaggt atcacgcagc ccaacggtgc
     8401 ggttaaatac cggtttttcg gccgtggaat ggcggctgtc gaggcagaag taaccttcac
     8461 gctcaaactg gaatgcttta cccgctaccg catctttcag cgacggttca gcaaagccct
     8521 gtttgatcac cagcgattcc gggttaatca ccgacaggaa atcatccgca gcacctgggt
     8581 taggcacgtt gaacagacgg tcatacaaac ggatttcaac cggcagcgca tgtgccgcgc
     8641 tcacccagtg aataacacct ttgactttac gaccattagc cggatctttg cttaaggtgt
     8701 cggcgtcata agtacagaag atggtggtga tattaccttc ggcatctttc tcgacgcgtt
     8761 ctgccttaat gacgtaagca ttacgcagac gcacttcttt acccagcacc agacgtttgt
     8821 actgcttgtt agcttcttcg cggaaatcgg cgcgatcgat ccaaatctca ccgctaaatg
     8881 gcacctgacg gctgcccatt tccggtttat tcggatggtt cggcatggta accatttcgc
     8941 cttcgccctg gtagttttcg ataaccagtt tcaccggatc gataaccgcc attgcgcgcg
     9001 gcgcattttc gttgagatct tcacggatgc aggattccag tgacgccatc tcaatggtgt
     9061 tgtcctgctt ggtcacacca atgcgtttgc agaactcacg aatagaagcc gcagtgtaac
     9121 cacgacgacg cagaccagaa atggtcggca tacgcgggtc atcccagcct tcaacgtgct
     9181 tatcggtcac cagcaggttc agcttacgct tggacatcac agtgtattcc agattcaggc
     9241 gcgagaattc gtactggcgc gggtgaacag gaatggtgat gttgtccagt acccagtcgt
     9301 acagacggcg gttgtcctgg aactcaagcg tacacagaga gtgagtaata ccttccaggg
     9361 catcgctgat gcagtgggtg aagtcgtaca tcgggtagat gcaccacttg ttgccagtct
     9421 ggtggtgttc agcaaattta atgcggtaca gcaccggatc gcgcatcacg ataaacggtg
     9481 aagccatgtc gattttcgca cgcaggcagg ctttaccttc ttcaaaaccg ccggtacgca
     9541 ttttctcgaa cagcgccagg ttctcttcaa cgctacggtc gcggtacggg ctgtttttac
     9601 ccggctgcgt cagggtgccg cggtattcgc ggatctgttc cggcgtcagt tcatcaacgt
     9661 acgccaggcc tttattgatc agttcgatcg cataggcgtg aagctgatca aaataatcgg
     9721 aggagtaacg gacgttacca gaccagtgaa aacctaacca ctctacgtcg tttttgatcg
     9781 actcaacata ctcgatatct tcttttaccg ggttagtgtc gtcgaaacgc aggttgcact
     9841 ggcctttata gtcctgggcg atcccaaagt tcaggcagat agatttcgca tggccaatat
     9901 gcagatagcc attcggctcc ggcgggaaac gggtgtgtac tgtggtgtgc ttaccactgg
     9961 ccagatcttc atcgatgatc tgacggataa agttagtcgg gcgggcttct gcctcactca
    10021 tcgtggattc ctcaaagcgt aaacaacgta taacggcgta tgatcttata agcgggacag
    10081 gctgacaact gttagttagc gaaaatcgaa aatctcactg agattatggg gatgattgac
    10141 gaaaaaaaaa gcggcagaga agatctccac cgcttttgcc agtcccgcgt cattgttgga
    10201 tgcgcgtctt atccaaccag gactgagctt ttgtaggcct gataagacgc gtcaagcgtc
    10261 gcatcaggta taaagcagat tactttttga tttcatacag cggtgtttga cccgccacaa
    10321 catggccctg agctttaatg atcaagccac tgaaatcgtc gatattactg caaaccactg
    10381 ggctaatcat cgagcgggcg ttagcgttca ggtaatccag atccatttcc agaatcggtt
    10441 gtcctgcgct tacctgcgcg ccctcttcca ccagacgttt aaagccttta ccttccagcg
    10501 ctacggtgtc gatacccata tggacgacga tctccgcgcc tttttcggtt tccaggcaga
    10561 acgcgtggtt ggtgttgaag attttcacga ttgtccctgc ggctggtgat acgacgattt
    10621 tatctgtcgg tttcaccgcc acaccgtcac ccaccgcttt gctggcgaat gcttcgtcag
    10681 gaacctgatc cagtgccacg acatcaccgg taatcggcga taccagctcc gcgatagata
    10741 ccgcgtttgg tacagcctgc ggttttgcta caggagcggc agttgccgga gttgcttcag
    10801 cagaggcagc tgctaccggg ccacgggcaa cgactttctt catcgcatcg ccgatggatt
    10861 ctgctttcgc gccaacaatc acctgaatag tctgtttgtt cagttttact accccagaag
    10921 cccccagacg tttacacatc gcatcgttaa cgcgggcaga gtcagccacg gtaaggcgca
    10981 gacgggtgat acaggcgtca atcgctttca ggttgtcagt gccgccaacc gcagcaatat
    11041 agttggttgc cagttgagtc agaccttctt cagtgttgct gttggcttct tcagtaacga
    11101 tctcgtcttc tttatcttca cgacccggcg ttttcaggtt gaacatgcgg ataaccaaac
    11161 tgaacaccac gaagtagata gcgaagaaga caacacccat caccagcagc atccagacgt
    11221 tctggctggc ggccggcagg ttatacatca acgcgtagtc gatagccccc gcagagaaag
    11281 agaagccggc atggataccc agcagcgttg ccacaaacag gctgataccg gtcagcagtg
    11341 cgtgcaggag gtacagcagc ggagcaagga acatgaacag gaattccagc ggctcagtca
    11401 caccggtcag gaacgcagta acagcaacag aaagcagcat cccgccaacc atcggacgac
    11461 gctctttcgg tgctgcgaag tacatcgcca gcgccgcccc cggcagaccg aacatcatga
    11521 tcgggaagaa gccggacatg aacatccccg cggtgccgtc accggcatag aagcggttga
    11581 tatcaccgtg gaaaaccgta cccgccgcgt tggtgaattc accaatctgg aaccaggcga
    11641 tggtgttcag cacctgatgc agaccagttg ggatcagcag acggttgatg aaaccaaaga
    11701 taccggaacc cagcgcgccc gcagaaacga tccactcacc gcctgcatgg atagcgtgct
    11761 gtaccggcgg ccagacgtaa ccaaaaatgg ccaccagcac cagacagaag aagccggtgg
    11821 cgatcggcac aaagcgtttg ccgccgaaga agctcaggaa gtccggcagt ttaatatcgg
    11881 accaacggtt ataggctgcg ccaccaacca gaccggtaat gatacccgcc agtacaccca
    11941 tgtttatttc tgggttgatg gtcaccatcg ctttggttaa cacaaagtaa cctaccgcac
    12001 ccgccagcgc cgccgcacct gcgctgtctt tcgaccaact ggatgccaca ccgatggcga
    12061 agattaatgc gaggttatca aaaatcgcac cgcccgcttg ggcaataaac gcaacgttaa
    12121 gtaaatctgg ctgaccgaat cgcagcaaca gcgccgccac cggcagcacc gcgataggga
    12181 gctgtaacgc cctaccgagt cgctggaaaa aacctaaaat attcatctta ttccccctac
    12241 gagaacccta tttggctcgt ttaaagccgt atttttattt tgctgcaaat tgtactgccg
    12301 atgttctgta atcagattgt tagatcatct gctacagagt gtgtgaaaat ttaattcgta
    12361 tcgcaaatta aacgcgtgtc ttttgtgagt tttgtcacca aatatcgtta tcaacactcc
    12421 cttttactgg ctaaaccaga aaacttattt tatcattcaa aaaatcaggt cggattgacg
    12481 cctgtctgcg caaatccagg ttacgcttaa agatgcctaa tccgccaacg gcttacattt
    12541 tacttattga ggtgaataat gagactgatc cccctgacta ccgctgaaca ggtcggcaaa
    12601 tgggctgctc gccatatcgt caatcgtatc aatgcgttca aaccgactgc cgatcgtccg
    12661 tttgttctgg gcctgccgac tggcggcacg ccgatgacca cctataaagc gttagtcgaa
    12721 atgcataaag caggccaggt cagctttaag cacgttgtca ccttcaacat ggacgaatat
    12781 gtcggtctgc cgaaagagca tccggaaagc tactacagct ttatgcaccg taatttcttc
    12841 gatcacgttg atattccagc agaaaacatc aaccttctca acggcaacgc cccggatatc
    12901 gacgccgaat gccgccagta tgaagaaaaa atccgttctt acggaaaaat tcatctgttt
    12961 atgggcggtg taggtaacga cggtcatatt gcatttaacg aaccggcgtc ttctctggct
    13021 tctcgtactc gtatcaaaac cctgactcat gacactcgcg tcgcgaactc tcgtttcttt
    13081 gataacgatg tcaatcaggt gccaaaatat gccctgactg tcggtgttgg tacattgctg
    13141 gatgccgaag aagtgatgat tctggtgctg ggtagccaga aagcactggc actgcaggct
    13201 gcagttgaag gttgcgtgaa ccacatgtgg accatcagct gtctgcaact gcatccaaaa
    13261 gcgatcatgg tgtgcgatga accttccacc atggagctga aagttaagac tttaagatat
    13321 ttcaatgaat tagaagcaga aaatatcaaa ggtctgtaat tgttatccct gccctggctc
    13381 cttgctcagg gcaatatttt ttaaaatcgg gggtcagaat gtatgcatta acccagggcc
    13441 ggatctttac cggctacgaa tttcttgatg accacgcggt tgttatcgct gatggcctga
    13501 ttaaaagcgt ctgtccggta gcggaactgc cgccagagat cgaacaacgt tcactgaacg
    13561 gggccattct ctcccccggt tttatcgatg tgcagttaaa cggctgcggc ggcgtacagt
    13621 ttaacgacac cgctgaagcg gtcagcgtgg aaacgctgga aatcatgcag aaagccaatg
    13681 agaaatcagg ctgtactaac tatctgccga cgcttatcac caccagcgat gagctgatga
    13741 aacagggcgt gcgcgttatg cgcgagtacc tggcaaaaca tccgaatcag gcgttaggtc
    13801 tgcatctgga aggtccgtgg ctgaatctgg taaaaaaagg cacccataat ccgaattttg
    13861 tgcgtaagcc tgatgccgcg ctggtcgatt tcctgtgtga aaacgccgac gtcattacca
    13921 aagtgaccct ggcaccggaa atggttcctg cggaagtcat cagcaaactg gcaaatgccg
    13981 ggattgtggt ttctgccggt cactccaacg cgacgttgaa agaagcaaaa gccggtttcc
    14041 gcgcggggat tacctttgcc acccatctgt acaacgcgat gccgtatatt accggtcgtg
    14101 aaccgggcct ggcgggcgcg atcctcgacg aagctgacat ttattgcggt attatcgctg
    14161 atggcctgca tgttgattac gccaacattc gtaacgctaa acgccttaaa ggcgacaaac
    14221 tgtgtctggt taccgacgcc accgcgccag caggtgccaa cattgaacag ttcatttttg
    14281 cgggtaaaac aatatactac cgtaacggac tttgtgtgga tgagaacggt acgttaagcg
    14341 gttcatcctt aaccatgatt gaaggcgtgc gtaatctggt cgaacattgc ggtatcgcac
    14401 tggatgaagt gctgcgtatg gcgacgctct atccggcgcg tgcgattggc gttgagaaac
    14461 gtctcggcac actcgccgca ggtaaaatag ccaacctgac cgcattcaca cctgatttta
    14521 aaatcaccaa gaccatcgtt aacggtaacg aggtcgtaac tcaataagag aaagtatgac
    14581 accaggcgga caagctcaga taggtaatgt tgatctcgta aaacagctta acagcgcggc
    14641 ggtttatcgc ctgattgacc agtacgggcc aatctcgcgg attcagattg ccgagcaaag
    14701 ccagcttgcc cccgccagcg taaccaaaat tacgcgtcag cttatcgaac gcgggctgat
    14761 caaagaagtt gatcagcagg cctccaccgg gggccgccgc gctatctcca tcgtcaccga
    14821 aacccgcaat ttccacgcaa tcggcgtacg gcttggtcgt cacgacgcca ccatcaccct
    14881 gtttgatctc agcagcaaag tgctggcaga agaacattac ccgctgccgg aacgtaccca
    14941 gcaaacgctg gaacatgccc tgttgaatgc cattgctcag tttattgata gctaccagcg
    15001 caaactgcgc gagctgatcg cgatttcggt gatcctgcca gggcttgttg acccggacag
    15061 cagcaaaatt cattacatgc cgcatattca ggtagaaaac tgggggctgg tagaagcact
    15121 ggaagaacgt tttaaagtga cctgtttcgt tggtcacgat atccgtagtc tggcgctggc
    15181 ggagcactac ttcggtgcaa gtcaggattg cgaagactcc attctggtgc gtgtccatcg
    15241 cggaaccggg gccgggatta tctctaacgg gcgcattttt attggccgca acggtaacgt
    15301 cggtgaaatt ggccatattc aggtcgaacc gctgggtgaa cgctgccact gcggcaactt
    15361 tggctgcctg gaaactatcg ctgccaacgc cgctattgaa caacgggtgt tgaatctgtt
    15421 aaagcagggc taccagagcc gcgtgccgct ggacgactgc accatcaaaa ctatctgcaa
    15481 agccgcgaac aaaggcgata gcctggcgtc ggaagtgatt gagtatgtcg gtcgtcatct
    15541 gggcaaaacc atcgccattg ctatcaactt atttaatccg caaaaaattg ttattgccgg
    15601 tgaaatcacc gaagccgata aagtgctgct ccctgctatt gaaagctgca ttaataccca
    15661 ggcgctgaag gcgtttcgta ctaatctgcc ggtggtacgt tctgagctgg atcaccgctc
    15721 ggcaatcggc gcttttgcgc tggtaaaacg cgccatgctc aacggtattt tgctccagca
    15781 tttgctggaa aattaatgtg cttttatagt ggcgcttatt gttgtcaata ttctgggtag
    15841 tccatgacca ttaaaaatgt aatttgcgat atcgacggcg tgctgatgca cgataacgtc
    15901 gccgtaccgg gtgcagcgga atttttgcac gggattatgg ataaaggcct gccgctggtg
    15961 ttgctgacca actatccttc gcagaccggg caagatctgg cgaaccgctt tgccactgcc
    16021 ggtgtcgatg tgccggatag cgtgttttat acctctgcga tggcgaccgc cgatttcctg
    16081 cgtcgccagg aaggcaagaa agcgtatgtg gtgggcgaag gcgcactgat tcatgaactg
    16141 tacaaagccg gtttcactat taccgatgtg aaccctgatt tcgtgattgt tggcgaaacg
    16201 cgttcctaca actgggacat gatgcataaa gcggcctatt tcgtcgctaa cggtgcacgc
    16261 tttatcgcca ccaacccgga cacccacggg cgcggtttta tcccgcttgt ggcgcgttgt
    16321 gtgcagggat tgagaaaatc tccgggcgca aaccgttcta tgttggtaag cccagcccgt
    16381 ggatcatccg cgcagcatta aacaaaatgc aggcgcattc ggaagaaacg gtgattgtcg
    16441 gcgataactt gcgcaccgac attctggcgg gcttccaggc cggtctggag acgattctgg
    16501 tgctttctgg tgtttcatcg ctcgacgata tcgacagtat gccgttccgc ccaagctggg
    16561 tttacccgtc agtcgctgaa atcgacgtta tctgaatacc acccacgtct gcggacgtgg
    16621 gtggctctga tgacaaacgc caaactgcct gatgcgctac gcttatcagg cctacgcagc
    16681 tcctgcaata tattgaattt tcatgctttt gtaggccgga taaggcgttc acgccgcatc
    16741 cggcatgaac aaatcgcact ttatcagcaa tttggccccc gtaaaatata accattcaat
    16801 aaaactcgct aaaaattatc gattcatcaa taaatacatc ctcacaccac cccctttttc
    16861 atcaatcgac aatcaccatt acgtttttta tttttgcact gccaaatagc ttgcgcacgg
    16921 tgctgctttg cggcattttt ttaaacaagc aaacacaaca agcaacaaat accaggttaa
    16981 cggagaaggt tatgtgttca atttttggcg tattcgatat caaaacagac gcagttgagc
    17041 tgcgtaagaa ggccctcgag ctgtcacgcc tgatgcgtca tcgtggcccg gactggtccg
    17101 gtatttatgc cagcgataac gccattctcg ctcacgaacg tctgtcaatt gttgacgtta
    17161 acgcgggggc gcaacctctc tacaaccaac aaaaaaccca cgtactggcg gtaaacggtg
    17221 aaatctacaa ccaccaggca ttgcgcgctg aatatggcga tcgttatcag ttccagacag
    17281 ggtctgactg tgaagtgatc ctcgcgctgt atcaggaaaa agggccggaa tttctcgacg
    17341 acttgcaggg catgtttgcc tttgccctgt acgacagcga aaaagatgcc tacctgattg
    17401 gtcgcgacca tctggggatc atcccactgt atatgggcta tgacgaacac ggtcagctgt
    17461 atgtggcctc agaaatgaaa gccctagtgc cagtttgccg cacgattaaa gagttcccgg
    17521 cggggagcta tttgtggaga caggacggcg aaatccgttc ttattatcat cgcgactggt
    17581 tcgactttga tgcagtgaaa gataacgtga ccgacaaaaa cgagctgcgt caggcactgg
    17641 aagattccgt taaaagccat ctgatgtctg atgtgcctta cggtgtgctg ctttctggtg
    17701 gtctggattc ctcaattatt tcagcgatca ccaagaaata cgccgcccgt cgcgtggaag
    17761 atcaggaacg ctctgaagcc tggtggccgc agttacactc gtttgctgta ggtctgccaa
    17821 gttcaccgga tctgaaagca gcccaggaag tggcaaacca tctgggcacg gtgcatcacg
    17881 aaattcactt cactgtacag gaaggtctgg atgccatccg cgacgtgatt taccacatcg
    17941 aaacttatga tgtgaccact attcgcgctt caacaccgat gtatttaatg tcgcgtaaga
    18001 tcaaggcgat gggcattaaa atggtgctgt ccggtgaagg ttctgatgaa gtgtttggcg
    18061 gttatcttta cttccataaa gcgcccaacg ctaaagaact gcatgaagag acggtgcgta
    18121 aactgctggc cctgcatatg tatgactgcg cgcgcgccaa caaagcgatg tcagcctggg
    18181 gcgtggaagc acgcgttccg ttcctcgaca aaaaattcct tgatgtggcg atgcgcatta
    18241 acccgcagga taaaatgtgc ggtaacggca aaatggaaaa acacatcctg cgtgaatgtt
    18301 ttgagtcata cctgcccgca agcgtggcct ggcggcagaa agagcagttc tccgatggcg
    18361 tcggttacag ttggatcgac accctgaaag aagtggcggc gcagcaggtt tctgatcagc
    18421 aactggaaac tgcccacttc cgcttcccgt acaacacgcc gacctcaaaa gaagcgtatc
    18481 tgtaccgcga gatctttgaa gaactgttcc cacttccgag tgccgctgag tgcgtgccgg
    18541 gcggtccttc cgtcgcgtgt tcttcagcta aagcgatcga atgggatgaa gcgttcaaaa
    18601 aaatggacga tccgtctggt cgtgcggttg gcgttcacca gtcggcgtat aagtaagaaa
    18661 tgcgaaacag ccccggtgaa atccggggct gtttcagtta ttgaggtgct tgttgattct
    18721 gatatgcagt aaggaaatgt tccgggtttg ccacatcact gtttgacaac tcatcactgt
    18781 aggccagtat ttcatagatt aatttcccac cactattgtt gaattccgaa tttcatcctg
    18841 tccgacaaaa gaatggctgt agggtgggga aaaaacacaa agtaaacaat aattgacgaa
    18901 tatagcgcca cgctgttcgc aacctaacca aacagtcact ttcgagcaat tttccttgaa
    18961 aaagaggttg acgctgcaag gctctatacg cataatgcgc cccgcaacgc cgataaggta
    19021 tcgcgaaaaa aaagatggct acgtagctca gttggttaga gcacatcact cataatgatg
    19081 gggtcacagg ttcgaatccc gtcgtagcca ctatcctttt tttgcgggag tggcgaaatt
    19141 ggtagacgca ccagatttag gttctggcgc cgcaaggtgt gcgagttcaa gtctcgcctc
    19201 ccgcaccatt caccagaaag cgttgtacgg atggggtatc gccaagcggt aaggcaccgg
    19261 tttttgatac cggcattccc tggttcaaat ccaggtaccc cagccatctt cttcgagtaa
    19321 gcggttcacc gcccggttat tggggtatcg ccaagcggta aggcaccggt ttttgatacc
    19381 ggcattccct ggttcgaatc caggtacccc agccatcgaa gaaacaattt ggctacgtag
    19441 ctcagttggt tagagcacat cactcataat gatggggtca caggttcgaa tcccgtcgta
    19501 gccaccaaat tctgaatgtg tcgaatacgt tcggcaaatt caaaaaccaa tttgttgggg
    19561 tatcgccaag cggtaaggca ccggattctg attccggcat tccgaggttc gaatcctcgt
    19621 accccagcca atttattcaa gacgcttacc ttgtaagtgc acccagttgg ggtatcgcca
    19681 agcggtaagg caccggattc tgattccggc attccgaggt tcgaatcctc gtaccccagc
    19741 cacattaaaa aagctcgctt cggcgagctt tttgcttttc tgcgttcatt caatgtcgaa
    19801 tgcgatgttg atacagctaa tttgaatttg gcccacggtt cagggcaaac cagcctggaa
    19861 gcacactcag gcgcggtttt cccctcaccc taaccctctc cccgaggggc gaggggaccg
    19921 tccgcacgct tttgtagctt tggtatcaac cgttacgcta caaccctaac gcatatttca
    19981 gcgcctgacg tttcaacacg ccagcacgct ccgccgccat caaaccaaga ttacgcacaa
    20041 aacgcagcgg cggcagatta ttactgaatc cggcataaaa cagatccata ccactttgca
    20101 taatgaagtt atccgccatg cgccgcatct ggtaacgctt gaggacagga taactggccc
    20161 acgcttcgcc gtagctgcgg gcattcacca gaacatcaat cagggcatcg acatcacgat
    20221 aaccaagatt caccccctgc cccgccagcg gatggatggt atgcgcggca tcgcccacca
    20281 gcgcaagccc cggctgcaca tactgcaacg catggcgacg cgtcagcgga aacgcaccag
    20341 cggcaagcgg tgtcacgtaa cccagacgcg acgggaaatg cttcgcgatt tccgtctgga
    20401 gctgcgccat attcatattc tgcaactggc gaatacgcac cggagagtca taccacacca
    20461 gcgatgccca gttatcaaac aacggcagaa acgcacgcgg tccgtccggg gtaaattgct
    20521 gccaggtgct gtcgccggga tcgttctcac actgtacgct aatcaacata cacgactgcg
    20581 catactgcca ggcatgaacg ccaattcccg ccatctgccg cacctgcgaa tttgcgccgt
    20641 cggcaccaat caccagcttc gcgcggatcg tttcaccgcc cttcagttcc agctcctgaa
    20701 gatcatcatg gcgatgcagc gcaatcagcg aggttggcac acgtaacgtt actttcggat
    20761 gcgcttccag cgcctgccac aatgcctgtt gcaggacggt gttttccacc atatagccaa
    20821 gcagcggcag cttaagttca gcggcgtcaa acatcacatg cgccgtttcc cactcccacg
    20881 tttccagtct gcggtaagga tggcaacgca tagcctgtac tgcatcccag acccctaacc
    20941 ctttaagcaa tgataccgaa gccgcgctga tcgccgagat ccgcacatcc ggctggctgt
    21001 cagcgataaa cggtgcaggt tctgcgtgct cgatcacagt taccgaaaat ccgtgctgtg
    21061 ccagccccag cgccagtgcg ccgccgacca ttcctccgcc gacaatggca atttccgttg
    21121 gttgatttgt catggtcaat catcctgtta gcaatatgct ttaagtttac aggattttta
    21181 cccctaaggg ctgataacgc tcatactggt cacaacggca gcaaagcatt acactatgcg
    21241 ccctgcattc ctggctacta tttcgcaaga gcaagtcgat gaccaaaaaa ctccatatta
    21301 aaacctgggg ctgtcagatg aacgagtacg attcatcgaa gatggccgat ctgctggatg
    21361 ccacccacgg ctatcaactg accgacgtgg cggaagaagc ggatgtgctg ctgctgaaca
    21421 cctgctcaat ccgcgagaag gctcaggaaa aagtcttcca tcagttgggt cgctggaaac
    21481 tgttaaaaga gaagaatcca gacctgatta tcggcgtcgg cggctgcgtg gcatcgcaag
    21541 aaggcgagca cattcgccaa cgcgcccact atgtcgatat tatttttggg ccgcaaacgc
    21601 tgcaccgtct gccggagatg atcaactccg tgcgcggcga ccgcagcccg gttgtagata
    21661 tcagcttccc ggaaatcgag aagtttgacc gtctgccgga accgcgcgcc gaagggccga
    21721 ccgcgtttgt ctccatcatg gaaggctgca ataaatattg cacctactgc gtggtgcctt
    21781 acacccgtgg tgaagaggta agccgtccgt ccgacgatat tctgtttgag atcgcccagc
    21841 ttgcggctca gggcgtgcgt gaagtcaacc tgctcggtca gaatgtgaat gcctggcgtg
    21901 gtgagaacta cgacggcacc accggatcgt ttgccgatct gttgcgtctg gttgctgcga
    21961 tcgacgggat cgatcgtatt cgctttacca ccagccatcc gatcgaattc accgacgata
    22021 tcatcgaagt gtaccgcgac acgcctgagc tggtgagctt cctgcatctg ccggtacaaa
    22081 gcggttccga tcgcattctg aacctgatgg gccgtactca cacggcgctg gagtacaaag
    22141 cgatcatccg taaactgcgt gcggcgcgtc cggatattca gatcagttct gacttcattg
    22201 ttggcttccc tggcgaaacc accgaagact tcgagaaaac gatgaagctg attgccgacg
    22261 tcaatttcga catgagctac agctttatct tctctgcacg tccgggtaca ccagccgccg
    22321 atatggttga tgatgttccg gaagaagaga agaagcaacg tctgtatatt ctgcaagaac
    22381 gtatcaatca gcaagcgatg gcatggagcc gccggatgct cggcaccacc cagcgtattc
    22441 tggtagaagg gacttcgcgt aagagcatca tggagctttc cgggcgtacc gaaaataacc
    22501 gcgtggtcaa cttcgagggc acaccggata tgatcggtaa attcgtcgat gtagaaatta
    22561 ccgacgtcta cccgaactct ctgcgcggta aagtggtgcg tactgaagat gaaatgggtc
    22621 tgcgcgtggc agaaacaccg gaatcggtga ttgcccgtac ccgcaaagaa aacgaccttg
    22681 gcgtgggtta ttatcagccg taattctcag gcccgccgtt ccggtgggcc ttgttttttc
    22741 tctctttatc cccatcttta tcgcaatgct tgcgcctttt tcctgtggcg tgaataattt
    22801 ccttataggc cggtgaatgt tcagcttccg gcggcataca gataagagga acggtttgaa
    22861 catagacact cgcgaaatca ccctggagcc agcagacaac gcgcgtctgt tgagcctgtg
    22921 cggcccgttt gacgacaaca tcaagcagct cgaacgccgt ctcggcatcg agatcaatcg
    22981 ccgcgataac cactttaaac tgaccggccg tccgatttgc gtcaccgctg cggcagacat
    23041 tctgcgtagc ctgtatgtcg atacagcccc gatgcgcggt cagattcagg atatcgaacc
    23101 ggaacagatc caccttgcga ttaaagaagc gcgagtactg gagcaaagtg cggagagcgt
    23161 gccggagtac ggcaaagcgg tcaatatcaa aaccaaacgc ggcgtaatta agccgcgcac
    23221 gccaaaccag gcgcagtaca tcgccaatat tctcgaccat gacattacct tcggcgttgg
    23281 cccggcgggt acgggtaaaa cctacctggc agtggctgcg gcagttgatg ccctggagcg
    23341 tcaggaaatt cgccgtattc tgctgactcg tccggcggtc gaagccggtg agaaactggg
    23401 cttcctgcct ggcgatttaa gccagaaagt agacccgtat ctgcgcccac tgtacgacgc
    23461 gctgtttgaa atgctgggct ttgagaaagt cgagaaactg attgagcgca acgttattga
    23521 agtcgcgccg ctggcctata tgcgtggtcg tacgctgaac gacgcgttta tcattctcga
    23581 tgagagccag aacaccacca tcgaacagat gaagatgttc ctgacccgta tcggttttaa
    23641 ctcaaaagcg gttatcaccg gcgacgtcac acagatcgac ctgccgcgta atactaaatc
    23701 aggcttacgt cacgccatcg aagtgctggc cgatgtcgaa gagatcagct ttaacttctt
    23761 ccacagcgaa gacgtggttc gtcacccggt ggtggcgcgt atcgttaacg cttatgaagc
    23821 ctgggaagaa gcagaacaaa aacgtaaagc ggcgctggca gcagaacgca agcgcgaaga
    23881 acaggaacaa aaatgagtca ggtgatcctc gatttacaac tggcatgtga agataattcc
    23941 gggttaccgg aagagagcca gtttcagaca tggctgaatg cggtgatccc gcagtttcag
    24001 gaagagtcgg aagtgactgt tcgcgtggtc gataccgccg aaagccacag tctgaatctg
    24061 acctatcgcg gtaaggataa gccgaccaac gtgctctcct tcccgtttga agtgccgcct
    24121 ggcatggaga tgtcgctact gggcgatctg gttatctgcc gtcaggtggt tgagaaggag
    24181 gctcaggagc aaggcaaacc actggaggca cactgggcgc atatggtggt gcacggcagt
    24241 ctgcatttgt taggttacga tcacatcgaa gatgacgaag cagaagaaat ggaagccctc
    24301 gaaacagaga ttatgcttgc tctgggctat gaggatccgt acattgccga gaaagaataa
    24361 tttgccaggc attttactgg cagacgtccc cgccgttggt gattaacgac ggcgttttga
    24421 ttaactaaca tgagaaccca tacgacgcca tgagcgacga caattcacac agtagtgaca
    24481 cgataagcaa caagaaggga tttttctccc tgttactcag ccaacttttc cacggtgaac
    24541 cgaaaaaccg tgacgaactg ctggcgctga tccgtgattc cgggcagaac gaccttatcg
    24601 acgaagatac gcgcgatatg ctcgaagggg tgatggacat cgcagaccaa cgcgttcgcg
    24661 acatcatgat cccccgctcc cagatgatta ccctgaaacg caaccagacg ctggacgaat
    24721 gccttgatgt catcatcgag tccgcccact cacgtttccc ggtgattagc gaagacaaag
    24781 atcacattga agggattctg atggcgaaag acttgctgcc gtttatgcgc agcgatgctg
    24841 aagccttcag catggacaaa gtgttacgtc aggcggttgt cgttcctgaa agtaagcgcg
    24901 tagaccggat gctgaaagag tttcgctctc agcgttacca catggcgatc gtcattgacg
    24961 aattcggtgg ggtttccggt ctggtgacca ttgaagacat cctggaactg attgttggtg
    25021 aaattgaaga tgagtacgac gaagaagatg atatcgactt ccgtcagctc agccgccaca
    25081 cctggacggt gcgcgcgctg gcctcaatcg aagatttcaa cgaagccttc agcacccact
    25141 tcagcgatga agaagtcgat accatcggcg ggctggtgat gcaggcattt gggcatcttc
    25201 cggcgcgtgg cgaaactatc gacatcgacg gttaccagtt caaagtggcg atggccgaca
    25261 gtcggcgtat tattcaggtt catgtcaaaa tccctgatga ctcaccccag ccgaagctgg
    25321 atgaataaaa ccgaaactgg atagataact acatggcttt tgcctcatta attgaacgcc
    25381 agcgcattcg cctgctgctg gcgttattat tcggtgcctg cggaacgctg gccttctctc
    25441 cttacgacgt ctggcctgcg gcgattattt cgctgatggg gcttcaggcg ttgaccttta
    25501 accgccgtcc actccagtct gccgctattg gctttggctg gggatttggt ctctttggca
    25561 gcggtattaa ctgggtctat gtcagcatcg cgacctttgg cggaatgcct ggcccggtta
    25621 acatcttcct ggtggtactg ctggcggcgt atttgtcgct gtataccgga ctgtttgctg
    25681 gcgtgctgtc gcgtctgtgg ccgaaaacca cctggctgcg cgtggcgatt gccgcccctg
    25741 ctctctggca agtgaccgag tttctgcgcg gttgggtact gaccggcttc ccgtggttac
    25801 agttcggcta tagccagatt gatggcccgt taaaagggct ggcaccgata atgggcgtgg
    25861 aagccattaa cttcctgctg atgatggtta gtggcctgct ggcactggcg ttggtcaaac
    25921 gcaactggcg tccgctggtg gtggccgtcg tgctgtttgc ccttcccttc ccgctgcgtt
    25981 acatccagtg gtttacccca caaccggaga aaaccattca ggtttcgatg gttcagggcg
    26041 atattccgca atcgctgaaa tgggacgaag gccagcttct taatacgctg aagatttact
    26101 acaacgcaac ggcaccgctg atgggcaaat catcgttgat tatctggccg gagtcggcga
    26161 taaccgatct ggaaattaat cagcaaccgt tcctcaaagc actggacggt gagttgcgcg
    26221 ataaagggag tacgcttgta accggaattg ttgacgcgcg tctcaataag cagaacctct
    26281 acgataccta caacaccatc atcacgctgg gtaaaggtgc accgtacagt tacgaatcag
    26341 ccgatcgcta taacaaaaac catctggtgc cgtttggcga gtttgtcccg ctggagtcga
    26401 ttctgcgtcc gttagcaccg ttctttgatc tgccgatgtc gtcgttcagc cgtgggccat
    26461 atatccagcc gccgctgtcg gcaaatggta ttgagcttac tgcggctatt tgctacgaga
    26521 tcattctcgg cgagcaagtg cgcgataact tccgcccgga taccgactat ctgctgacta
    26581 tctccaacga tgcgtggttt ggtaagtcta ttggtccatg gcagcacttc cagatggcgc
    26641 gaacgcgtgc gctggagctg gcgcgcccat tgctgcgtag caccaacaac ggcattacgg
    26701 cggtgattgg cccgcagggt gagattcagg cgatgatccc gcagttcacc cgcgaggtgt
    26761 tgaccactaa tgtgacaccg accaccggac tcacaccgta tgcacgtacc ggcaactggc
    26821 cgctgtgggt gctgacggcg ctgtttggtt ttgccgctgt gctgatgagt ctgcgagcac
    26881 gtaaacgttg atgtgcctga tgtatcctgc atgagcaaaa cgtactttct cattgagctt
    26941 tggggcatgg ttatcatgcc cctttttctt acggttcagg gatacaagcc acattgccat
    27001 attggggatg acgaataatt gcctgcggat caagcgagcg cgtcctgtcc atttggatca
    27061 acccgttctt cgccatgaca aatatttttc taccatccgc tgaaaaacga aggtgattaa
    27121 cgtagctggc aggataaacg ccaataatct gcccggcatt aatattgagc aggatgacat
    27181 aaccttgcag gccatatgac accaacgcta aatattgacc gtccgggcta ataccctcaa
    27241 cggaataaac gctcctgcta caccattgcg tcataatgct ggcttgttga tcccctacgc
    27301 ttatacgtga aatcccctga ctatcggcaa aaataacctc gccgttttca ggtcgaaaac
    27361 gcatcgccga tatcgttcca cgcgcatcac ctgcgggaaa gtcttctttc tgatgcgtga
    27421 tggtattgat ccgcacgatg ttacctctgc ctgctcccgg aaccagtaat gttctttcat
    27481 ccggggaaag tgccataacc caggcgcctg gtttaccgct cgtccccgtc ccgtcgtatt
    27541 tctccagcgg gatatccgcc acatgctgat aagtcgccag atcaatcgct gacacactat
    27601 tactggtgcg attcatcacc caggcttttg tgccatcacg cgagaggata aaactgtcag
    27661 gatgtgcacc ggtggtaatc gactgaataa tctcccctgt cgccacgtta atgaccgata
    27721 atgcattcgc ttcaaatgac gtcgcataaa tcaacttttc atccgggctt aatgccagcg
    27781 atctgacgcc ctgatcttta cagccaccac aatgtttgac tgacttttct tttgctatgg
    27841 gcgctgtaaa ggtatgcagg attttctttt gtccgaggtc gaaaacaaca atgctgttgg
    27901 tgttttcaat tgcggcatac aacgtattac catcccgact gatctccata tcatggatat
    27961 cggcaatctc agcgagtaaa tcaccactgg cctgttcacg acttaccgga gcggataatg
    28021 tttccctgag ggcgttgcgt tcctccgcta actgttgttt ttttgtcgtc gctcttgttc
    28081 aatctcctgc ggataaaacg cttcacgcag gctttgcctg acctgtaaaa ctgactcatc
    28141 catctgctgc tgcgcaagcc agatagcccc ggtcagaaga agactgcccg caacaataat
    28201 cccaccttcc gtaacgagtc ggttttgccc agataaacgc gcgctcagcc aacccaacgc
    28261 gccacccgca atcaggccgc caatgtggca agcgttatct attcctgttt gccgggcacc
    28321 gtacaacagt gtcagcgcca ccatacccaa cagaggaaat actcgccgct ggtttttatg
    28381 gtgtgtgccc gcacctgaag caagctgtgt tgctatcgca gcgccagctt ctgctcactt
    28441 tcgcgtaacg cataacaggc gctgattagc ccaccaaaga cgccagagaa tagccagaca
    28501 atcaggagtc gccatttccc cagaatacgt tccaccactc cccccaccac caggagtgca
    28561 aacatattca tcagcaaatg agaaacactg ttgtgcagaa agacactgct caataagcgc
    28621 caggattcac ccgacaacgt gagagaagca acgttagcac cgagatggat gagtgcggat
    28681 tgatcgactt cttcataact catccattgt gcgaggtaac aaaatatccc aacacagagc
    28741 gcaaaaagga taagggttat tgcgggtaat tgaacattta acggcttaac cgaagatgca
    28801 gacataaggt gattcttcct tgaatagaca ggtaaaaagc atttttcccg tgtgcagtta
    28861 tcatcccggc aaacgtccca agccgaaaag ataactctgt ccgaaatatg actttttcag
    28921 cctgaaatta caatcgtaat taattcactc ctaagtattt tttggcatgt aagttgcttt
    28981 atttactgtg taagcaatga aatcagccgc gatgcaacca ggttgcacca ccacaaatca
    29041 ccggtagcac caaaagagtg cattttaaga attttgcttc ggaagggtgc ggcgcatctc
    29101 gcaaaaacaa acaataaaac agcaatatct ttacatttag ccaaactaaa tgttacctaa
    29161 caggcacaac actgcacaat aaagttgcag acgataacaa cacaaacact cacaacgggt
    29221 atccatgcgt tcttaacgca gaagataaag gagttggata tgcaattacg taaacctgcc
    29281 acagcaatcc tcgccctggc gctttccgca ggactggcac aggcagatga cgccgccccg
    29341 gtagcgggca gtacgctgga caaaatcgcc aaaaacggcg tgattgtcgt cggtcaccgt
    29401 gaatcttcag tacctttctc ttattacgac aatcagcaaa aagtggtggg ttactcgcag
    29461 gattactcca acgccattgt taaagcagtg aaaaagaaac tcaacaaacc ggacttgcag
    29521 gtaaaactga ttccgattac ctcacaaaac cgtattccac tgctgcaaaa cggcactttc
    29581 gattttgaaa tgtggttcta ccaccaacaa cgtcgaacgc caaaaacagg cggctttctc
    29641 tgatactatt ttcgtggtcg gtacgcgcct gttgaccaaa aagggcggcg atatcaaaga
    29701 ttttgccgat ctgaaaggca aagccgtagt cgtcacttcc ggcactactt ctgaagtttt
    29761 gctcaacaaa ctgaatgaag agcaaaaaat gaatatgcgc atcatcagcg ccaaagatca
    29821 cggtgactct ttccgcaccc tggaaagcgg tcgtgccgtt gcctttatga tggatgacgc
    29881 tctgctggcc ggtgaacgtg cgaaagcgaa gaaaccagac aactgggaaa tcgtcggcaa
    29941 gccgcagtct caggaggcct acggttgtat gttgcgtaaa gatgatccgc agttcaaaaa
    30001 gctgatggat gacaccatcg ctcagatgca gacctccggt gaagcggaaa aatggtttga
    30061 taagtggttc aaaaatccaa ttccgccgaa aaacctgaac atgaatttcg aactgtcaga
    30121 cgaaatgaaa gcactgttca aagaaccgaa tgacaaggca ctgaactaat tacaagaacc
    30181 aggggcggaa attccagccc tctcgattgt tacgtagcac ggacagacta tacgcctgat
    30241 ggtcgttccc catcgggcct gaaaaccgca atacgctggg taacaatctt cgagggtagc
    30301 agttaacgct gctaacctct tttttctgga gtagatttat gtctatagac tggaactggg
    30361 gtattttttt acaacaagcc ccgttcggca ataccaccta tcttggttgg atctggagtg
    30421 gttttcaggt gacgatcgct ttgtcgatct gcgcctggat tatcgctttc ctcgtcggtt
    30481 catttttcgg cattttacgt accgttccaa accgttttct ctctggtctg ggtacgttgt
    30541 atgtcgaact attccgcaac gtgccgttga ttgtgcaatt ctttacctgg tatctggtga
    30601 tcccggagtt gctgccagag aaaatcggca tatggtttaa ggccgagctg gatcccaata
    30661 ttcagttttt cctttcatcc atgctctgcc ttgggctgtt taccgccgcc cgtgtttgcg
    30721 aacaggtacg cgccgctatt cagtcgctgc cgcgtgggca gaagaatgcc gcgctggcga
    30781 tgggtctgac gctaccgcag gcttaccgct acgtgctgtt gcctaacgcg tatcgcgtta
    30841 tcgtcccgcc aatgacttcc gagatgatga acctggtgaa aaactcagcc atcgcctcga
    30901 ctatcggtct ggtggatatg gcagcgcagg cgggtaaatt gctcgactac tcggcccacg
    30961 cttgggcatt acgcttgcgt atgtgttgat taacgctttt atcatgctgg tgatgacgct
    31021 ggttgaacgt aaagttcgcc tgcccggcaa catggggggc aaataatgta cgagtttgac
    31081 tggagttcca ttgttccttc cctgccatat ctgctcgacg ggctggtgat caccctgaaa
    31141 atcaccgtca cggcagtcgt gattggtatt ttgtggggca ccatgctggc ggtgatgcgc
    31201 ttgtccagct ttgcgcccgt agcgtggttt gccaaagcct acgttaacgt attccgctcg
    31261 attcctttag ttatggtttt gctgtggttt tacctgatcg tgccgggttt tctgcaaaac
    31321 gtgctgggat tatcgccaaa aaatgatatc cgtttaattt cggcgatggt ggcgttttcg
    31381 atgtttgaag cggcctacta ttcagagatt atccgtgccg gtattaaaag tatttctcgt
    31441 ggtcaatcga gcgccgcgct ggcgttggga atgactcact ggcagtcgat gaaactgatt
    31501 attctgccgc aggcgttccg cgcgatggtg ccgctgctgc tcactcaggg catcgtactg
    31561 ttccaggata cctcattagt gtatgtgtta tctctggccg atttcttccg taccgcttca
    31621 accattgatg agcgtgatgg tacgcaggtt gagatgatcc tgtttgccgg atttgtttat
    31681 ttcgttatta gccttagcgc atcgttgttg gtcagctact tgaaaagaag gacagcataa
    31741 tgattaccct gaaaaatgtt tcaaaatggt atggtcactt tcaggtgctg accgactgct
    31801 caaccgaagt gaaaaaaggc gaagtggtgg tagtttgcgg cccgtctggt tccggcaaat
    31861 caacgctgat taaaaccgtc aacggcctcg aaccagtgca gcaaggtgaa atcaccgtcg
    31921 atggtatcgt ggttaacgac aagaaaaccg atctggcaaa gctgcgttcc cgcgtcggga
    31981 tggtattcca gcatttcgag ctgttccctc atctgtcgat tatcgaaaac ctgaccctgg
    32041 cgcaggtgaa agtgcttaaa cgcgataaag cgcccgctcg tgaaaaagca ttgaaattgc
    32101 tggagcgcgt gggactttcc gctcatgcca ataagtttcc ggcgcagctt tccggcggtc
    32161 agcagcagcg tgtagcgatc gctcgcgcat tgtgtatgga tcctatcgcg atgctgttcg
    32221 acgaaccgac atcggcgctg gatccggaga tgatcaacga agtactggat gtgatggtgg
    32281 aactggcgaa cgaaggaatg accatgatgg tggtgaccca cgaaatgggc tttgcccgca
    32341 aagtggcgaa tcgggtgatc tttatggacg agggtaaaat tgtcgaagac tcgccgaaag
    32401 atgcgttctt cgatgatccg aaatcggacc gcgcgaaaga cttcctcgcg aaaatcctgc
    32461 attaatcact ctggcgcgca tacccaagtg cgcgccatct cacgctttat cgtttcgccc
    32521 ctcgtatctg ttacatcctg gcgttaccct tgtcgcaaag aagcacacaa caaggagcaa
    32581 caatggcact gccaattctg ttagattgcg acccaggtca tgacgacgct atcgcaatag
    32641 ttctcgccct cgcctcacca gagcttgatg tcaaagcaat tacgtcttcc gccggaaacc
    32701 agacaccaga aaaaacctta cgcaatgttc ttcgtatgct gaccttgctc aatcgcaccg
    32761 atattccggt agcaggcggc gcggtaaaac cgttaatgcg tgagttgatt atcgcggaca
    32821 atgtgcacgg cgaaagcggt ctggatggcc cggcattacc ggaaccgacg ttcgcaccgc
    32881 aaaactgtac ggcggtagag ctgatggcga aaacgctgcg cgaaagtgcg gaacctgtca
    32941 cgattgtgtc taccggaccg caaactaacg ttgccttgct gctcaatagc catccggaac
    33001 tgcatagcaa aattgcccgt atcgtgatta tgggtggcgc tatggggctg ggtaactgga
    33061 cgcctgcggc tgaatttaat atttacgttg acccggaagc ggcagaaatt gtcttccagt
    33121 cagggatccc agtggtgatg gccggtctgg atgttactca caaagcacaa atccacgttg
    33181 aagacaccga gcgtttccgc gcgattggca accctgtttc aaccattgtt gccgaactgc
    33241 tggatttctt cctcgaatat cataaagacg aaaaatgggg ctttgtcggc gcaccgctgc
    33301 atgacccatg caccatcgcc tggctgttaa aaccggagtt gtttaccact gttgagcgct
    33361 gggttggcgt ggaaacacag gggaaatata cccagggtat gacggttgtt gattattatt
    33421 atctgactgg caataaaccg aatgccactg taatggtcga tgttgatcgt cagggctttg
    33481 ttgatttact ggctgatcgt ctgaaatttt acgcttaaca cacgtcattg attaagatca
    33541 ccacgcgtta cttgggtggt cttaatctgt ttatctcttt ttctttcaag atataaatgc
    33601 aatggataat gcagaactcg ccattggtat cgatctcggt actaccaata gtttaattgc
    33661 cgtctggaaa gacggtgccg cgcaattaat tccaaataag ttcggtgaat atttaacacc
    33721 atccataatt agcatggatg aaaataatca tattttagtc ggaaaaccgg ctgtatcacg
    33781 gcgtacttcg catccggata aaacggcagc gttatttaaa cgtgcaatgg gcagtaatac
    33841 caactggcgg ttaggcagcg acacatttaa cgcgccagaa ctgtcctctt tggtattacg
    33901 ctcattaaaa gaagatgccg aagaatttct gcaacgtccg attaaagatg tggtgatctc
    33961 cgttccggct tatttcagcg atgaacaacg caagcatacc cgtttagcag cggagttagc
    34021 cgggttaaat gcggtacgct taattaatga acccacagca gctgcgatgg cgtatggcct
    34081 gcatacccaa caaaataccc gttcgctggt ttttgatctc ggtggcggca catttgacgt
    34141 tacggtgctt gagtacgcca cgccggtgat tgaagttcac gcctccgctg gcgacaactt
    34201 tcttggtggc gaagatttta cccatatgct ggtcgatgag gttttaaaac gcgcggatgt
    34261 cgccaggacc acgcttaacg agagtgaact ggcagccttg tacgcctgtg tggaagcggc
    34321 aaaatgtagc aatcaatcgc caatgcacat tcgctggcag taccaagatg aaacgcggga
    34381 atgcgaattt tacgagaatg aactggaaga tttgtggttg ccgctgctca atcgcttgcg
    34441 agtgccgatt gaacaggcgt tgcgcgatgc gcgtctgaag ccgagtcaaa tcgacagtct
    34501 ggtgctggtt ggcggcgcgt cacaaatgcc gctggtgcag cgaatcgccg tgcgtctgtt
    34561 tggcaaatta ccgtatcaaa gttacgaccc gagcaccatt gtcgcgctgg gcgcagcaat
    34621 ccaggccgcc tgccgcttac gcagtgaaga tattgaagag gtgatcctca ctgatatttg
    34681 cccttactcg ttgggcgttg aagttaaccg ccagggcgtt tccggcattt tctcgccaat
    34741 tattgaacga aacaccacag tacccgtgtc gcgtgtagaa acttactcga ccatgcaccc
    34801 ggaacaggat tctattacgg ttaacgtcta tcagggagaa aaccacaaag ttaaaaataa
    34861 cattctggtt gaatccttcg atgtgccgtt gaagaaaacc ggggcttatc agtcgattga
    34921 tattcgcttt agttatgata tcaacggctt gcttgaagtt gacgtgcttc tggaagatgg
    34981 cagcgttaag tccagagtca ttaatcatag cccggtaaca ttgagcgcgc agcagattga
    35041 agagagtcgg acgcggttat ccgcattgaa aatttatccg cgcgatatgc tcatcaatcg
    35101 cacctttaaa gccaaactgg aagagttgtg ggcgcgggcg ctgggtgacg agcgagaaga
    35161 gatcggccgg gtgatcaccg attttgatgc ggcgttgcag tcaaacgata tggcccgcgt
    35221 ggatgaagtt cggcggcggg cgagcgatta tttagccatt gagatcccat aaacacggct
    35281 gccggatgcg gcgtaaacgc tgcatccggc atcggcgcaa aaaacacatc gtcagctaaa
    35341 caacatcgcg attttgccga gagcataacc tatcaccagc accgttaaac tgattttgat
    35401 aatgctggta atgctctgtg gtttttcatc ctcatcatgt atttcttcat ggttttcagg
    35461 tgttggctca tagacatctt catcctccgg ctcgagtttc actttcgtca acagcatccg
    35521 ggtgacaatg gcctctaatg gatgagcatc tccgccttcc agccttgtat taagacgtgc
    35581 cagcatctct tgtttcggga atgcttccag cccaacctgt tccgctaccc gatacaaatc
    35641 cagtaacggt gaatcttgtt ctgtctcgct accgactctc gatttccacc acgcccatgc
    35701 tttgcgtttg aagaataacg actcaataaa cgattgacct aacggcgata attttccgct
    35761 atgtaaaatc tccgcccata acagccgcgt ccaggcgctc tcaccaggaa catatttcag
    35821 cgattgacct tgcgcatcaa ccatgctctg cgcttcgata accatcacta ataacgcgaa
    35881 ataatccggg caatgacgct tgctccactg caacaacaaa ttatcagctt gtgtagatgg
    35941 gtaactctcc cagtatgcgc agagctcagc aagcaggctt tccccctcgc cgcagtacaa
    36001 acgttgtgca cactggtaat atcgggcatc ttcgctttct ggttcttccg cttgccactg
    36061 tttggctaca ggaatgagtt ccaccatacc tgtttgcacc gagctgtacc agcgcaacag
    36121 tttgcgatgc aacttcacat catcaggaat gaaccacgga ccttccatcg ccaaaaacgc
    36181 agtgacatag tcaggatggt aacggcagca acgttccagc gcgaagtaat actcaaccgt
    36241 ctggttctgc aacgcaacgg gatattccag aaggctaagg aaatcgaaac aatcaccagc
    36301 ctgaatggcc tcaagaaaag cctccctttc ttcctcatcc attccttcgc tgtcattaaa
    36361 cgaatgcctg ttcaaacgct ctgccagcaa agaagcacaa ttcaatgaaa gatatcgcgc
    36421 ttctatagcg attgcacaca gcggccagcg taattgatcg acatcctcca tgttccaggt
    36481 atttaattgc tgaataaatt tctgccaggc ggagggctga aaacgatcac tttctgaatc
    36541 cagtaatgcc ctgaatgcac gtagtatttc atgttcagcg gcggcatctt tatcttcatt
    36601 atctgcttcc tcgacaggat ttaccgccag tcgtagcgcc tcttcatagg cctggcgtaa
    36661 tgctttaaac ccctgcggat cggtttcggg atgacacaac ggtaagcgag caagataagc
    36721 ctggcggata atgtctattt gcgtcgtgct ttcaatttcg aggatttgcc aacatgtttt
    36781 cataggtcgc tcacatcctt aagcgttacc gggcattcag gctggacagt taatggctgc
    36841 cagggaagcg tggcatagaa acgatcgctt cccgctgcca gctcttcgaa catccgactc
    36901 ccggcgctat cgtatttgta cagggttagc gcctcgcgta gcgaagcgtt gtcttcgcac
    36961 tgagaagatt gccagtagag acgccctagt gaataggcag aaaaatagtg catccagctg
    37021 tgatagtaat ggtgagctcg tacatagacg cgcgattgca gccataaact ctcttcttcc
    37081 gtcagccagt tgttgagcac accgccccgt gacagaaacc ccattcgaac ataatcccag
    37141 gctttgattc ccccttctcc acagcacata gcggtttggg caacgaattg ggtataaatc
    37201 aaccctctct ccgagccacc agcaattaat gctttccact cttcagggga agagcgatgc
    37261 catgtcagat ataagccagc taaatcattg gcatgaccat catcagtcat ctgataaata
    37321 gtctgaatta aatcatcacg attatttatt ccccaggatg atgagagatc gaattctttt
    37381 atcccagtat acatttttgg cgagtcatgc gcgggtttgc aaccctgatt aagtatttcc
    37441 atgggcgcag aaagcgcaaa aagaagatat tgttcttcct tattcatttg ttaataatcc
    37501 cttaagtgca ttaactgact acttttttat tattgatgag tataaacttg acgctttcaa
    37561 aataaaaaga aaatcgaagc attcacacat gaataaaaaa ttaatgtata tattcgcaat
    37621 ttttatagtt gcagcaatta cctgtattag ccaacccaag aaaacgacgt tgcgtgataa
    37681 agccatggtg aattatgcct ttgattattt aagctcaccg ggcagtctac cgtttaccac
    37741 ggcggccacg gagctttccg cgattcatgg tcactcaacg tcgcaatatc gccttggaga
    37801 attttatctt catggtagcg acggtaaacc actggattat acacaggcga gatactggta
    37861 tgagcaatca gcggaacagg aaaatccacg cgcgcaaagt aaactggggt ggatctacct
    37921 caaaggtctg ggggtcaaac ccgacacccg taaagcaatt ctctggtata aggaagcagc
    37981 tgaacaaggg tatgctcatg ctcaatatac tttaggtttg atctacagaa atggctcagg
    38041 tattaatgtt aaccattatg aatctcaaaa atggttaaaa ctggccgcca aacaacatta
    38101 caaaaatgcg gaaagattac ttgccgggct tcccgcacat taacgtcgac tgtcacccga
    38161 acagatggag tattttccct atcaaaccag caaagataaa aatatagaaa ataattttaa
    38221 tgatgcccag acagcctggc ccaccatcgt caacgggcat tggctgcggt tgcggctccg
    38281 gttcaacagt ttgcttctcg gtaaaattcg ccgcctgaat taataatcga cgaataatta
    38341 atgcttccag tggacaacga tcttccgcat caagacggct cacaatcggc attaatgatt
    38401 cttctgtcgg ttggctggc
//
LOCUS       DAJVTL010000024        37907 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.024, whole genome shotgun sequence.
ACCESSION   DAJVTL010000024 DAJVTL010000000
VERSION     DAJVTL010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37907
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.024"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1121
                     /gene="sgrR"
                     /locus_tag="OQQ26_001197"
     CDS             <1..1121
                     /gene="sgrR"
                     /locus_tag="OQQ26_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SgrR"
                     /protein_id="HCS1856714.1"
                     /translation="WRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSP
                     TPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQL
                     KIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLL
                     FDSRTHRGANKQVRDWVSYVLSPTNLVYFAEEQHQQLWFPAYGLLPRWHHARTIKSEK
                     PAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLN
                     SANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMV
                     PLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      1155..1254
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1285..2268
                     /gene="thiB"
                     /locus_tag="OQQ26_001198"
     CDS             1285..2268
                     /gene="thiB"
                     /locus_tag="OQQ26_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HCS1856715.1"
                     /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
                     ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
                     STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
                     TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR"
     gene            2244..3854
                     /gene="thiP"
                     /locus_tag="OQQ26_001199"
     CDS             2244..3854
                     /gene="thiP"
                     /locus_tag="OQQ26_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease ThiP"
                     /protein_id="HCS1856716.1"
                     /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
                     AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
                     PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
                     ALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
                     GGPQATTIELAIYQVLSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQ
                     GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
                     LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
                     LLNNTIDLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
                     KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
                     VTALILLLLCFLLFTVIEKLPGRNVKTD"
     gene            3838..4536
                     /gene="thiQ"
                     /locus_tag="OQQ26_001200"
     CDS             3838..4536
                     /gene="thiQ"
                     /locus_tag="OQQ26_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein
                     ThiQ"
                     /protein_id="HCS1856717.1"
                     /translation="MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
                     IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMMFQENNLFSHLTVAQNIGLGLNPGLKL
                     NAAQQEKMHAIARHMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
                     DPALRQEMLTLVSTSCQQQKMTLLMVSHNVEDAARIATRSVVVADGRIAWQGKTEELL
                     SGKASASALLGIKG"
     gene            complement(4606..5370)
                     /locus_tag="OQQ26_001201"
     CDS             complement(4606..5370)
                     /locus_tag="OQQ26_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1856718.1"
                     /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
                     HALHQHSMFTILIGRFVGPTRPLVPMVAGMLDLPVAKFITPSIIGCLLWPPFYFLPGI
                     LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
                     WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV"
     gene            complement(5456..6334)
                     /gene="araC"
                     /locus_tag="OQQ26_001202"
                     /pseudo
     CDS             complement(5456..6334)
                     /gene="araC"
                     /locus_tag="OQQ26_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308095.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
     gene            6673..8316
                     /gene="araB"
                     /locus_tag="OQQ26_001203"
     CDS             6673..8316
                     /gene="araB"
                     /locus_tag="OQQ26_001203"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HCS1856719.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
                     ALNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL
                     ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
                     PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
                     MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
                     QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
                     VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI
                     AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
                     SAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAE"
     gene            8384..9886
                     /gene="araA"
                     /locus_tag="OQQ26_001204"
                     /pseudo
     CDS             8384..9886
                     /gene="araA"
                     /locus_tag="OQQ26_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308093.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
     gene            10086..10781
                     /gene="araD"
                     /locus_tag="OQQ26_001205"
     CDS             10086..10781
                     /gene="araD"
                     /locus_tag="OQQ26_001205"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HCS1856720.1"
                     /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS
                     GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTSTHRLLYQAFPSIGGIVHTHSRHAT
                     IWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWKTGNVIVETFEKQGIDA
                     AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKH
                     YLRKHGAKAYYGQ"
     gene            10856..13207
                     /gene="polB"
                     /locus_tag="OQQ26_001206"
     CDS             10856..13207
                     /gene="polB"
                     /locus_tag="OQQ26_001206"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HCS1856721.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
                     IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
                     VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
                     RHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPD
                     VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNSVFFAQAKGRLIID
                     GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
                     DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
                     EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG
                     RALVQHVNSWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG
                     DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL
                     VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
                     DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
     gene            13373..16279
                     /gene="rapA"
                     /locus_tag="OQQ26_001207"
     CDS             13373..16279
                     /gene="rapA"
                     /locus_tag="OQQ26_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HCS1856722.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
                     LVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
                     SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE
                     QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVL
                     TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
                     SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ"
     gene            16291..16950
                     /gene="rluA"
                     /locus_tag="OQQ26_001208"
     CDS             16291..16950
                     /gene="rluA"
                     /locus_tag="OQQ26_001208"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HCS1856723.1"
                     /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKRSGLLSVPGRLEEHKD
                     SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD
                     F"
     gene            complement(17067..17882)
                     /gene="djlA"
                     /locus_tag="OQQ26_001209"
     CDS             complement(17067..17882)
                     /gene="djlA"
                     /locus_tag="OQQ26_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HCS1856724.1"
                     /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR
                     VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE
                     LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
                     TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
     gene            18137..20491
                     /gene="lptD"
                     /locus_tag="OQQ26_001210"
     CDS             18137..20491
                     /gene="lptD"
                     /locus_tag="OQQ26_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HCS1856725.1"
                     /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
                     GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKV
                     SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
                     QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
                     AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL
                     EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
                     YDDAAVERFNISVGQIYYFTESRTGDDNITWENDNKTGSLVWAGDTYWRISERWGLRG
                     GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI
                     SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
                     NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL"
     gene            20544..21830
                     /gene="surA"
                     /locus_tag="OQQ26_001211"
     CDS             20544..21830
                     /gene="surA"
                     /locus_tag="OQQ26_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HCS1856726.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
                     IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
                     AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA
                     HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
                     SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS
                     ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
                     QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
     gene            21830..22819
                     /gene="pdxA"
                     /locus_tag="OQQ26_001212"
     CDS             21830..22819
                     /gene="pdxA"
                     /locus_tag="OQQ26_001212"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HCS1856727.1"
                     /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
                     DRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLA
                     RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV
                     ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
                     GTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
                     GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
     gene            22816..23637
                     /gene="rsmA"
                     /locus_tag="OQQ26_001213"
     CDS             22816..23637
                     /gene="rsmA"
                     /locus_tag="OQQ26_001213"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HCS1856728.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
                     KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES"
     gene            23640..24017
                     /gene="apaG"
                     /locus_tag="OQQ26_001214"
     CDS             23640..24017
                     /gene="apaG"
                     /locus_tag="OQQ26_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HCS1856729.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
                     DENGVPFSIDIPVFRLAVPTLIH"
     gene            24024..24872
                     /gene="apaH"
                     /locus_tag="OQQ26_001215"
     CDS             24024..24872
                     /gene="apaH"
                     /locus_tag="OQQ26_001215"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HCS1856730.1"
                     /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
                     SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
                     EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDMGE
                     GEAVAS"
     gene            complement(24869..25183)
                     /locus_tag="OQQ26_001216"
     CDS             complement(24869..25183)
                     /locus_tag="OQQ26_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcdB family protein"
                     /protein_id="HCS1856731.1"
                     /translation="MQFTVYRSRSRNAAFPFVIDVTSDIIGEINRRIVIPLTPIERFS
                     RIRPPERLNPILLLVDGKEYVLMTHETATVPVNALGTKFCDASTHRMLIKGALDFMLD
                     GI"
     gene            complement(25186..25419)
                     /locus_tag="OQQ26_001217"
     CDS             complement(25186..25419)
                     /locus_tag="OQQ26_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system CcdA family
                     antitoxin"
                     /protein_id="HCS1856732.1"
                     /translation="MTAKRTTQSVTVTVDRELVNRARDAGLNMSATLTVALNAELKKH
                     AATRWREENAEAIAALNQLADETGCFSEEYRSF"
     gene            complement(25505..25984)
                     /gene="folA"
                     /locus_tag="OQQ26_001218"
     CDS             complement(25505..25984)
                     /gene="folA"
                     /locus_tag="OQQ26_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HCS1856733.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
                     HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(26176..28038)
                     /gene="kefC"
                     /locus_tag="OQQ26_001219"
     CDS             complement(26176..28038)
                     /gene="kefC"
                     /locus_tag="OQQ26_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HCS1856734.1"
                     /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
                     LFCMLLGLSWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
                     PLVAMIPLLAASSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
                     FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
                     FIGVGMSIDFGTLIENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
                     GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
                     DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
                     TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
                     AGVETPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
                     VRAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
     gene            complement(28031..28561)
                     /gene="kefF"
                     /locus_tag="OQQ26_001220"
     CDS             complement(28031..28561)
                     /gene="kefF"
                     /locus_tag="OQQ26_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HCS1856735.1"
                     /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
                     DIAAEQEALSRVDLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLW
                     AVTTGGGKSHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
                     RHYKQRLLEWQEAHHG"
     gene            complement(28672..30003)
                     /locus_tag="OQQ26_001221"
     CDS             complement(28672..30003)
                     /locus_tag="OQQ26_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1856736.1"
                     /translation="MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQL
                     TPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMF
                     VSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADL
                     VGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFG
                     EPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLG
                     VGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGI
                     WLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPI
                     FINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG"
     gene            complement(30062..30349)
                     /gene="fixX"
                     /locus_tag="OQQ26_001222"
     CDS             complement(30062..30349)
                     /gene="fixX"
                     /locus_tag="OQQ26_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like protein FixX"
                     /protein_id="HCS1856737.1"
                     /translation="MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACP
                     AGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG"
     gene            complement(30346..31632)
                     /locus_tag="OQQ26_001223"
     CDS             complement(30346..31632)
                     /locus_tag="OQQ26_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCS1856738.1"
                     /translation="MSEDIFDAIIVGAGLAGSVAALVLAREGTQVLVIERGNSAGAKN
                     VTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRS
                     YSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD
                     GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD
                     GLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEY
                     SAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSA
                     MKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFT
                     IDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL"
     gene            complement(31683..32624)
                     /locus_tag="OQQ26_001224"
     CDS             complement(31683..32624)
                     /locus_tag="OQQ26_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HCS1856739.1"
                     /translation="MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQA
                     IQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYR
                     LKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDAS
                     RTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLC
                     KAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQT
                     IFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR"
     gene            complement(32639..33409)
                     /locus_tag="OQQ26_001225"
     CDS             complement(32639..33409)
                     /locus_tag="OQQ26_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414583.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein FixA"
                     /protein_id="HCS1856740.1"
                     /translation="MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEA
                     ACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTAS
                     ALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVE
                     RELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAA
                     WSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI"
     gene            33882..35396
                     /gene="caiT"
                     /locus_tag="OQQ26_001226"
     CDS             33882..35396
                     /gene="caiT"
                     /locus_tag="OQQ26_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-carnitine/gamma-butyrobetaine antiport BCCT
                     transporter"
                     /protein_id="HCS1856741.1"
                     /translation="MTNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVF
                     SYVTNVWGWAFEWYMVVMLFGWFWLVFSPYAKKRLGNEPPEFSTASWIFMMLASCTSA
                     AVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYF
                     FFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTEC
                     MQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGGRIASDVRSYLSFLMLGWVFIV
                     SGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIF
                     LARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVAR
                     AIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRI
                     GWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD"
     gene            35427..36569
                     /gene="caiA"
                     /locus_tag="OQQ26_001227"
     CDS             35427..36569
                     /gene="caiA"
                     /locus_tag="OQQ26_001227"
                     /EC_number="1.3.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetainyl-CoA dehydrogenase"
                     /protein_id="HCS1856742.1"
                     /translation="MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVK
                     ALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGT
                     QEQIDKIMAFRGTGKQMWNSAITEPSAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSA
                     YTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELD
                     EKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQHVQFGEAIGRF
                     QLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQ
                     VLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR"
     gene            36698..>37907
                     /gene="caiB"
                     /locus_tag="OQQ26_001228"
     CDS             36698..>37907
                     /gene="caiB"
                     /locus_tag="OQQ26_001228"
                     /EC_number="2.8.3.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-carnitine CoA-transferase"
                     /protein_id="HCS1856743.1"
                     /translation="MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIE
                     NVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFA
                     RRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP
                     MPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNG
                     GEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLSTPEIPE
                     GTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQY
                     VARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDI
                     QELVSKGLAKV"
BASE COUNT         9029 a        10383 c         9970 g         8525 t
ORIGIN      
        1 actggcgttt ctttttgcgt ccaggagtcc attttcatca tggtcgtgaa ctggaaatgg
       61 acgacgtgat cgcctcttta aaacgaatca atacgctgcc gctctattcg catattgcgg
      121 acattgtgtc gccgacgccc tggacgctgg atatccatct cacgcaaccg gaccgctggt
      181 taccgttact gctggggcaa gttccggcga tgatcctgcc gcgcgaatgg gaaaccctca
      241 gtaactttgc cagccatccc atcggcaccg gtccgtatgc ggtgatccgc aacaccacca
      301 atcaactgaa aattcaggca ttcgatgact tcttcggtta ccgggcatta atcgatgaag
      361 ttaacgtctg ggttctgccg gaaattgccg acgagccagc tggaggtctg atgctaaaag
      421 gtccacaggg tgaggaaaaa gagattgaaa gccgcctgga ggaaggttgc tactatttac
      481 tattcgacag ccgcacccat cgcggggcga ataagcaagt cagggactgg gtaagctatg
      541 tgctttctcc aactaatctg gtctatttcg ctgaggaaca gcaccagcaa ctgtggttcc
      601 cggcttatgg actgctcccc cgttggcacc atgcccgcac cataaagagc gaaaaaccgg
      661 ctggcctaga aagcctcacc ctgacctttt atcaggatca cagtgagcat cgggtgattg
      721 ccgggatcat gcagcagatt ctggcaagtc accaagtcac gctggaaatc aaagagatca
      781 gctacgatca gtggcatgaa ggagagatcg agagcgatat ctggcttaac agcgccaact
      841 ttacgctgcc gctggatttt tcgctgttcg cgcacttgtg cgaggtgccg ctgctccaac
      901 actgtattcc gatcgactgg caagccgacg ccgcccgctg gcgcaatggc gaaatgaacc
      961 tggcgaactg gtgccagcaa ctggtcgcca gcaaagcaat ggtgccgctt atccaccact
     1021 ggctgatcat tcaggggcaa cgcagtatgc gcggcctgcg catgaacacc ctcggctggt
     1081 tcgattttaa atcagcgtgg tttgcgccac cggatccatg attgctggta gataacaaaa
     1141 tcactacact aacgccgttc tcaacggggt gccacgcaaa cgcgtgcgct gagaaaatac
     1201 ccgtcgaacc tgatccggat aacgccggcg aagggatttg aggctccttc tcaagtcctt
     1261 tgccactctt ttttgaggtg caaagtgtta aaaaaatgtc ttcccctgct gttgctgtgc
     1321 acagcgcccg ttttcgctaa acccgttctg actgtttata cctacgattc cttcgccgcc
     1381 gactgggggc ctggtccaaa gatcaaaaaa gcttttgaag ccgactgtaa ctgcgaactg
     1441 aaactggtgg cgctggaaga tggcgtttcg cttctcaacc gtctacggat ggaaggcaaa
     1501 aatagtaaag ccgatgtggt gctggggctg gataacaatc tgttagacgc cgccagtaaa
     1561 accggactat ttgccaaaag cggtgtggca gcggatgccg ttaacgttcc cggcggctgg
     1621 aataatgaca ctttcgtccc gtttgattac ggctatttcg ccttcgtcta tgacaagaac
     1681 aaactgaaaa acccgccgca aagcctgaaa gaattggttg agagcgatca gaactggcgg
     1741 gtgatttatc aggatccgcg taccagcacg ccggggctgg gtctgctgtt gtggatgcaa
     1801 aaagtctatg gcgatgacgc cccacaagcc tggcaaaaac tggcgaagaa aaccgtcacg
     1861 gtcaccaaag gctggagcga agcctacggc ctgtttttaa aaggtgaaag cgatctggta
     1921 ctgagttaca ccacctctcc ggcttatcac attctcgaag agaaaaaaga taactacgcc
     1981 gccgcgaact ttagcgaagg tcactatctg caggtggaag tcgccgcccg caccgctgcc
     2041 agcaagcagc cggagctggc gcaaaaattc ctccagttta tggtttctcc ggcttttcag
     2101 aatgcgatcc caaccggtaa ctggatgtat ccggtggcaa atgtcacgct gcctgccggg
     2161 tttgaacaat tgaccaaacc ggccaccacg ctggagttca caccagctga agtggcggca
     2221 caacgtcagg catggattag cgaatggcaa cgcgccgtca gccgttaatt cccggctggt
     2281 taattccagg tgtaagcgcc gccacgctgg tggtagcggt tgcgctcgcg gcgtttctcg
     2341 ccctgtggtg gaacgcgccg cagggtaact gggtggcagt ctggcaggac agctacctgt
     2401 ggcatgtggt gcgcttctcc ttctggcagg cgtttctctc ggcgctactc tctgtcgtac
     2461 ccgcgatatt cctcgcccgc gccctctatc gcaggcgctt tccgggtcgg ctggcgctgt
     2521 tgcgtctgtg cgcaatgacc ttgatcctcc cggtgctggt tgctgttttc ggcattctta
     2581 gcgtctatgg tcgtcagggc tggctggcat cgctctgcca atcgctcggt ctggagtgga
     2641 ccttttcgcc ctacggcctg caaggcattt tgctggccca tgtgtttttt aatctgccga
     2701 tggcgagccg cttattactc caggcactgg aaaacattcc cggcgaacaa cgtcagcttg
     2761 ccgcccagct tgggatgcgc ggctggcatt ttttccgctt cgtcgaatgg ccgtggctac
     2821 ggcgacaaat cccgccggtt gccgcgctta tctttatgct ctgtttcgcc agcttcgcca
     2881 ccgtgctatc gctgggcggc ggtccgcagg caaccactat cgagctggct atttatcagg
     2941 tgctgagtta cgactacgat cctgcccgcg cggcgatgct ggcgctgctc cagatggtgt
     3001 gttgccttgg gctggtgctg ttgagtcagc gactaagtaa ggccattgcg cccggcacca
     3061 cgctgctgca aggctggcgc gatccggacg atcgtctgca tagccgcatt tgcgacacgg
     3121 tgttaatagt gctggcgctg ctgctgttgc tgccaccgtt gctggcggtg atcgtcgatg
     3181 gggtaaatcg ccagttgccg gaagtgctgg cacaaccggt gctgtggcag gcgctgtgga
     3241 cctcgttgcg tattgcgctg gcggcaggtg tattgtgcgt agtgctgacc atgatgctgc
     3301 tatggagcag tcgcgaactg cgggcgcggc agaaaatgct ggcgggtcag gcgctggaga
     3361 tgagcggcat gttgatcctc gccatgccgg ggattgtgct ggctaccggc ttctttttac
     3421 tgctcaacaa cactatcgac ctgccacaat ctgctgacgg cattgtgatt ttcaccaatg
     3481 cgttaatggc gatcccttat gcgctgaaag tactggaaaa cccgatgcgc gatatcaccg
     3541 cccgctacag tatgttgtgt cagtcgctgg gcattgaagg ctggtcgcgc ttaaaagtgg
     3601 tcgagctgcg cgccctgaaa cgtccactgg cgcaggcgct ggcttttgcc tgcgtgctgt
     3661 cgattggtga ttttggcgta gtggcgttgt tcggtaacga tgatttccgt accctgccgt
     3721 tttatctcta ccagcaaatt ggctcctatc gcagccagga cggcgcggtc accgcgttaa
     3781 ttctgctact actctgtttt ctgctgttta ccgtgattga aaaactaccg gggcgaaatg
     3841 ttaaaactga ctgatatcac ctggctttat caccatttgc cgatgcgttt tagcttaacg
     3901 gtagaacgcg gcgagcaggt ggcaatcctc gggccaagcg gcgcgggtaa aagtaccctg
     3961 ctgaatttga ttgccggttt tctgacgcca gccagcggtt cgctgactat cgatggcgtt
     4021 gatcacacca cgacgccgcc gtcacgccgt ccggtgtcga tgatgtttca ggagaacaac
     4081 ctgttcagcc acctgacggt cgcgcagaac atcgggctgg ggctaaatcc gggattgaaa
     4141 ctgaacgcgg cacagcagga gaaaatgcac gctatcgccc gccatatggg gattgataat
     4201 ttaatggcgc ggttacctgg cgagctttcc ggcggtcagc gacagcgagt ggcgttagcg
     4261 cgttgtctgg tacgcgaaca gccgatttta ttgctcgatg aaccgttctc tgcactcgat
     4321 ccggcgttac gtcaggagat gttgacgctg gtgagcacga gctgccagca gcaaaaaatg
     4381 acgctattga tggtgtcgca caatgtggaa gatgccgcgc ggatcgccac gcgctcggtg
     4441 gtggtcgccg acgggcgcat cgcctggcag ggtaagaccg aagaattgtt gagcggtaag
     4501 gcgagtgctt cggcactatt ggggattaaa ggttaaaagc gcacggacag tcccctcgcc
     4561 cctctgggga gaagggaaca aaccagcgcc gatgcaaact atgccctaaa ctccaaccac
     4621 tttacgcaaa atatcgatat acaccggcat taacggatgg cgaattaaca ccaccagcgc
     4681 caccacgccg atggcagaaa tcaacggcgt cagccacaac aaacgaccgc gggacaaata
     4741 atgactcaaa cgatcggttg ctttgccgct gcgccataac cgccagcaca gccagccacc
     4801 aacccacaaa aataccgccg tcgccagcag caaccattta aactcgccac tctgcattcc
     4861 ggcaggaata tcgatcgccg cgcccgccag aatccctggc aggaagtaaa acggcggcca
     4921 cagcaggcag ccgataatac tcggcgtaat gaattttgcc accggcagat ccagcattcc
     4981 cgccaccatt ggcaccagcg gacgcgtcgg gccaacaaag cgaccgatca gaatggtgaa
     5041 catgctgtgt tgatgcaacg catgttcagt tttatcgagt aatgctttgt ttttcttcag
     5101 aaatgaccag cgatgcaacg gctttttaaa acgccagccc agccagaagg agatccagtc
     5161 gcccagcaga caaccgacaa tccctgccag ccaggcgtgc cagaaactta actcgccgct
     5221 gccaatcagc gctcccagcc ccgccatcag caccgtaccg ggtagaatca aaccgaccag
     5281 cgccagcgac tccagaaagg ctaccaacac caccgccatc aatgaataca cggtagattg
     5341 ggtaataaag tgttccagca atgcttgcat aatgtgcctg tcaaatggac gaagcaggga
     5401 ttctgcaaac cctatgctac tccgtcaagc cgtcaattgt ctgattcgtt accaattatg
     5461 acaacttgac ggctacatca ttcacttttt cttcacaacc ggcacggaac tcgctcgggc
     5521 tggccccggt gcatttttta aatacccgcg agaaatagag ttgatcgtca aaaccaacat
     5581 tgcgaccgac ggtggcgata ggcatccggg tggtgctcaa aagcagcttc gcctagctga
     5641 tacgttggtc ctcgcgccag cttaagacgc taatccctaa ctgctggcgg aaaagatgtg
     5701 acagacgcga cggcgacaag caaacatgct gtgcgacgct ggcgatatca aaattgctgt
     5761 ctgccaggtg atcgctgatg tactgacaag cctcgcgtac acgattatcc atcggtggat
     5821 ggagcgactc gttaatcgct tccatgcgcc gcagtaacaa ttgctcaagc agatttatcg
     5881 ccagcagctc cgaatagcgc ccttcccctt gcccggcgtt aatgatttgc ccaaacaggt
     5941 cgctgaaatg cggctggtgc gcttcatccg ggcgaaagaa acccgtattg gcaaatattg
     6001 acggccagtt aagccattca tgccagtagg cgcgcggacg aaagtaaacc cactggtgat
     6061 accattcgcg agcctccgga tgacgaccgt agtgatgaat ctctcctggc gggaacagca
     6121 aaatatcacc cggtcggcag acaaattctc gtccctgatt tttcaccacc ccctgaccgc
     6181 gaatggtgag attgagaata taacctttca ttcccagcgg tcggtcgata aaaaaatcga
     6241 gataaccgtt ggcctcaatc ggcgttaaac ccgccaccag atgggcatta aacgagtatc
     6301 ccggcagcag gggatcattt tgcgcttcag ccatactttt catactcccg ccattcagag
     6361 aagaaaccaa ttgtccatat tgcatcagac attgccgtca ctgcgtcttt tactggctct
     6421 tctcgctaac ccaaccggta accccgctta ttaaaagcat tctgtaacaa agcgggacca
     6481 aagccatgac aaaaacgcgt aacaaaagtg tctataatca cggcagaaaa gtccacattg
     6541 attatttgca cggcgtcaca ctttgctatg ccatagcatt tttatccata agattagcgg
     6601 atcctacctg acgcttttta tcgcaactct ctactgtttc tccatacccg tttttttgga
     6661 tggagtgaaa cgatggcgat tgcaattggc ctcgattttg gcagtgattc tgtgcgagct
     6721 ttggcggtgg actgcgccag cggtgaagag atcgccacca gcgtagagtg gtatccccgt
     6781 tggcaaaaag ggcaattttg tgatgccctg aataaccagt tccgtcatca tccgcgtgac
     6841 tacattgagt caatggaagc ggcactgaaa accgtgcttg cagagcttag cgtcgaacag
     6901 cgcgcagctg tggtcgggat tggcgttgac agtaccggct cgacgcccgc accgattgat
     6961 gccgacggta acgtgctggc gctgcgcccg gagtttgccg aaaacccaaa cgcgatgttc
     7021 gtattgtgga aagaccacac tgcggttgaa gaagcggaag agattacccg tttgtgccac
     7081 gcgccgggca acgttgacta ctcccgctac attggtggta tttattccag cgaatggttc
     7141 tgggcaaaaa tcctgcatgt gactcgccag gacagcgccg tggcgcaatc tgccgcatcg
     7201 tggattgagt tgtgcgactg ggtgccagct ctgctttccg gtaccacccg cccgcaggat
     7261 attcgtcgcg gacgttgcag cgccgggcat aaatctctgt ggcacgaaag ctggggcggc
     7321 ttgccgccag ccagtttctt tgatgagctg gacccgatcc tcaatcgcca tttgccttcc
     7381 ccgctgttca ctgacacctg gactgccgat attccggtgg gcaccttatg cccggaatgg
     7441 gcgcagcgtc tcggcttgcc tgaaagcgtg gtgatttccg gcggcgcgtt tgactgccat
     7501 atgggcgcag ttggcgcagg cgcacagcct aacgcactgg taaaagttat cggtacttcc
     7561 acctgcgaca ttctgattgc cgacaaacag agcgttggcg agcgggcagt gaaaggtatt
     7621 tgcggtcagg ttgatggcag cgtggtgcct ggatttatcg gtctggaagc aggccaatcg
     7681 gcgtttggtg atatctacgc ctggtttggt cgcgtactcg gctggccgct ggaacagctt
     7741 gccgcccagc atccggaact gaaagcgcaa atcaacgcca gccagaaaca actgcttccg
     7801 gcgctgaccg aagcatgggc caaaaatccg tctctggatc acctgccggt ggtgctcgac
     7861 tggtttaacg gccgccgcac accgaacgct aaccaacgcc tgaaaggggt gattaccgat
     7921 cttaacctcg ctaccgacgc tccgctgctg ttcggcggtt tgattgctgc caccgccttt
     7981 ggcgcacgcg caatcatgga gtgctttacc gatcagggga tcgccgtcaa taacgtgatg
     8041 gcgctgggcg gcatcgcgcg gaaaaaccag gtcattatgc aggcctgctg cgacgtgctg
     8101 aatcgcccgc tgcaaattgt tgcctctgac cagtgctgtg cgctcggtgc ggcgattttt
     8161 gctgccgtcg ccgcgaaagt gcacgcagac atcccatcag cccagcaaaa aatggccagt
     8221 gcggtagaga aaaccctgca accgcgcagc gaacaggcac aacgctttga acagctttat
     8281 cgccgctatc agcaatgggc gatgagcgcc gaataacact atcttccaac ttccgccccg
     8341 gcacaggctg cccaggccgt tgcgactcta taaggacacg ataatgacga tttttgataa
     8401 ttatgaagtg tggtttgtca ttggcagcca gcatctgtat ggcccggaaa ccctgcgtca
     8461 ggtcacccaa catgccgagc acgttgttaa tgcgctgaat acggaagcga aactgccctg
     8521 caaactggtg ttgaaaccgc tgggcaccac gccgaatgaa atcaccgcta tttgccgcga
     8581 cgcgaattac gacgatcgtt gcgctggtct ggtggtgtgg ctgcacacct tctccccggc
     8641 caaaatgtgg atcaacggcc tgaccatgct caacaaaccg ttgctgcaat tccacaccca
     8701 gtttaacgcg gcgctgccgt gggacagtat cgatatggac tttatgaacc tgaaccagac
     8761 tgcacatggc ggtcgcgagt tcggcttcat tggcgcgcgt atgcgtcagc aacatgccgt
     8821 ggttaccggt cactagcagg ataaacaagc ccatgagcgt atcggctcct ggatgcgcca
     8881 ggcggtctct aaacaggata cccgtcatct gaaagtctgc cgttttggcg ataacatgcg
     8941 tgaagtagcg gtcaccgatg gtgataaagt tgccgcacag atcaagttcg gtttctccgt
     9001 caatacctgg gcggttggcg atctggtgca ggtggtgaac tccatcagcg acggcgatgt
     9061 taacgcgctg gtcgatgagt acgaaagctg ctacaccatg acgcctgcca cacaaatcca
     9121 cggcgaaaaa cgacagaacg tgctggaagc ggcgcgtatt gagctgggga tgaagcgttt
     9181 cctggaacaa ggtggcttcc acgcgttcac caccaccttt gaagatttgc acggtctgaa
     9241 acagcttcca ggtctggccg tacagcgtct gatgcagcag ggttacggct ttgcgggcga
     9301 aggcgactgg aaaaccgccg ccctgcttcg catcatgaag gtgatgtcaa ccggtctgca
     9361 gggcggcacc tcctttatgg aggactacac ctatcacttc gagaaaggta atgacctggt
     9421 gctcggctcc catatgctgg aagtctgccc gtcgattgcc gtagaagaga aaccgatcct
     9481 cgacgttcag catctcggta ttggtggtaa ggacgatcct gcccgactga tcttcaatac
     9541 ccaaaccggt ccagcgattg tcgccagcct gattgatctc ggcgatcgtt accgtctgct
     9601 ggttaactgt atcgacacgg tgaaaacacc gcactccctg ccgaaactgc cggtggcgaa
     9661 tgcgctgtgg aaagcgcaac cggatctgcc aactgcttcc gaagcgtgga tcctcgctgg
     9721 tggcgcgcac cataccgtct tcagccatgc gctgaacctc aacgatatgc gccagttcgc
     9781 cgagatgcac gacattgaaa tcacggtgat tgataacgac acccgcctgc cagcgtttaa
     9841 agacgcactg cgctggaacg aagtgtatta cggatttcgt cgctaagtag ccacatcagg
     9901 tatgtaacgc ctgatgcgac gctgacgcgt cttatctggc ctacacgctg cgattttgta
     9961 ggccggataa gcaaagcgca tccggcattc aacgcctgat gcgacgctgg cgcgtcttat
    10021 caggcctacg cgctgcgatt ttgtagaccg gataagcgaa gcgcatccgg cacgaaggag
    10081 tcaacatgtt agaagatctc aaacgccagg tattagaagc caacctggcg ctgccaaaac
    10141 acaacctggt cacgctcaca tggggcaacg tcagcgccgt tgatcgcgag cgcggcgtct
    10201 ttgtgatcaa accttccggc gtcgattaca gcgtcatgac cgctgacgat atggtcgtgg
    10261 ttagcatcga aaccggtgaa gtggttgaag gtacgaaaaa gccctcctcc gacacgtcaa
    10321 ctcaccggct gctctatcag gcattcccct ccattggcgg cattgtgcat acgcactcgc
    10381 gccacgccac catctgggcg caggcgggtc agtcgattcc agcaaccggc accacccacg
    10441 ccgactattt ctacggcacc attccctgca cccgcaaaat gaccgacgca gaaatcaacg
    10501 gcgaatatga gtggaaaacc ggtaacgtca tcgtagaaac ctttgaaaaa cagggtatcg
    10561 atgcagcgca aatgcccggc gttctggtcc attcccacgg cccgtttgca tggggcaaaa
    10621 atgccgaaga tgcggtgcat aacgccatcg tgctggaaga ggtcgcttat atggggatat
    10681 tctgccgtca gttagcgccg cagttaccgg atatgcagca aacgctgctg gataaacact
    10741 atctgcgtaa gcatggcgcg aaggcatatt acgggcagta atgactgtat aaaaccacag
    10801 ccaatcaaac gaaaccaggc tatactcaag cctggttttt tgatggattt tcagcgtggc
    10861 gcaggcaggt tttatcttaa cccgacactg gcgggacacc ccgcaaggga cagaagtctc
    10921 cttctggctg gcgacggaca acgggccgtt gcaggttacg cttgcaccgc aagagtccgt
    10981 ggcgtttatt cccgccgatc aggttccccg cgctcagcat attttgcagg gtgaacaagg
    11041 ctttcgcctg acaccgctgg cgttaaagga ttttcaccgc cagccggtgt atggccttta
    11101 ctgtcgcgcc catcgccaat tgatgaatta cgaaaagcgc ctgcgtgaag gtggcgttac
    11161 cgtctacgag gccgatgtgc gcccgccaga acgctatctg atggagcggt ttatcacctc
    11221 accggtgtgg gtcgagggtg atatgcacaa tggcactatc gttaatgccc gtctgaaacc
    11281 gcatcccgac tatcgtccgc cgctcaagtg ggtttctata gatattgaaa ccacccgcca
    11341 cggtgagctg tactgcatcg gcctggaagg ctgcgggcag cgcatcgttt atatgctggg
    11401 gccggagaat ggcgacgcct cctcgcttga tttcgaactg gaatacgtcg ccagccgccc
    11461 gctgctgctg gaaaaactca acgcctggtt tgcaaaccac gatcccgatg tgatcatcgg
    11521 ctggaacgtg gtgcagttcg atctgcgaat gctgcaaaaa catgccgagc gttaccgtct
    11581 tccgctgcgt cttgggcgcg ataatagcga gctggagtgg cgcgagcacg gctttaaaaa
    11641 cagcgtcttt tttgcccaag ctaaaggtcg gctaattatc gacggtatcg aggcgctgaa
    11701 atccgcgttc tggaatttct cttcattctc gctggaaact gtcgctcagg agctattagg
    11761 cgaaggaaaa tctatcgata acccgtggga tcgaatggac gaaattgacc gccgtttcgc
    11821 cgaagataaa cctgcgctgg caacttataa cctgaaagat tgcgagctgg tgacgcagat
    11881 cttccacaaa actgaaatca tgccattttt actcgaacga gcaacggtga acggcctgcc
    11941 ggtggatcgg cacggcggtt cggtggcagc gtttggtcat ctctattttc cgcgaatgca
    12001 tcgcgctggt tatgtcgcgc ctaatctcgg cgaagtgccg ccgcacgcca gccctggcgg
    12061 ctacgtgatg gattcacggc cagggcttta tgattcagtg ctggtgctgg actataaaag
    12121 cctgtacccg tcgatcatcc gcacctttct gattgatccc gtcgggctgg ttgaaggcat
    12181 ggcgcaacct gatccagagc acagtaccga aggttttctc gatgcctggt tctcacggga
    12241 gaaacattgc ctgccggaga ttgtgactaa catctggcac gggcgcgatg aagccaaacg
    12301 tcagggtaat aagccgcttt cgcaggcgct gaagatcatt atgaatgcct tttatggcgt
    12361 gctcggcacc accgcctgcc gcttcttcga tccgcgcctg gcatcgtcga tcaccatgcg
    12421 tggtcatcag atcatgcggc aaaccaaagc gttgattgaa gcgcagggct acgacgtgat
    12481 ctacggcgat accgactcaa cgtttgtctg gctgaaaggc gcacattcgg aagaagaagc
    12541 ggcgaaaatc ggtcgtgccc tggtgcagca cgttaactcc tggtgggcgg aaacgctgca
    12601 aaaacaacgg ctgaccagcg cattagaact ggagtatgaa acccatttct gccgttttct
    12661 gatgccaacc attcgcggag ccgataccgg cagtaaaaag cgctacgccg ggctgattca
    12721 ggagggcgac aagcagcgga tggtgtttaa agggctggaa accgtgcgca ccgactggac
    12781 gccgctggcc cagcagtttc agcaggagct gtacctgcgt atcttccgca acgagccata
    12841 tcaggagtac gtccgcgaaa ccatcgacaa actgatggcg ggtgaactgg atgcgcggct
    12901 ggtttaccgt aaacgccttc gccgtccgct gagcgaatat cagcgtaatg ttccgcctca
    12961 tgtacgcgcc gctcgccttg ccgatgaaga aaatcaaaag cgcggtcgcc ccttgcaata
    13021 tcagaatcgc ggcaccatta agtacgtatg gaccaccaac ggcccggagc cgctggacta
    13081 ccaacgttca ccactggatt acgaacacta tctgacccgc cagctacaac ccgtggcgga
    13141 gggaatactc ccttttattg aggataattt tgctacactt atgaccgggc aacttgggct
    13201 attttgagca aaaaaaaaga gttcgccaga taccattttg atgcgtgacg aatgctttgc
    13261 catccagtac catagcaccc tttccattcc tggacctgaa taacaccact acctcataag
    13321 cacggtagcg ggtggttatt gcctgcaatt aaagatatag agccgaacac atatgccttt
    13381 tacacttggt caacgctgga tcagcgatac agaaagcgaa ttgggacttg gaaccgttgt
    13441 cgcggtggat gcgcgaactg tcactttact tttcccatct actggtgaaa accgtctgta
    13501 cgcacgcagt gattcccccg tgacccgcgt gatgttcaac cctggtgata ccattaccag
    13561 ccatgacggc tggcagatgc aagtcgaaga agtaaaagaa gaaaatggct tgctgaccta
    13621 tatcggtact cgcctggata ctgaagagtc cggcgtagcc ctgcgtgaag ttttccttga
    13681 tagcaaactg gtgttcagca aaccgcagga ccgcctgttt gccgggcaga ttgaccgtat
    13741 ggaccgcttt gcgctgcgtt atcgcgcgcg taagtattcc agcgaacagt tccgtatgcc
    13801 gtacagcggc ctgcgcggtc agcgtaccag cctgatcccg caccagctca acatcgctca
    13861 tgatgttggc cgccgccatg cgccgcgcgt cctgctggct gacgaagtgg gtttagggaa
    13921 aaccattgaa gccgggatga tcctgcatca gcaactgctc tctggcgctg ctgaacgtgt
    13981 gctgattatc gtcccggaaa ccttacagca tcagtggctg gtagaaatgc tgcgccgttt
    14041 caacctgcgt tttgcgctgt ttgatgatga gcgttatgcc gaagctcagc acgatgctta
    14101 caacccgttc gacaccgaac agctggtgat ttgctcgctg gattttgccc gtcgtagcaa
    14161 acagcgcctg gaacatctct gtgaagccga atgggacctg ctggtggtcg atgaagcgca
    14221 tcacctggtg tggagcgaag atgcgccaag ccgtgaatat caggccattg aacaactggc
    14281 agagcacgtg ccgggcgttc tgctgctgac cgcgaccccg gaacaactgg ggatggaaag
    14341 ccacttcgcc cgtctgcgtc tgctggaccc gaaccgtttc cacgattttg cgcagttcgt
    14401 tgaagagcag aaaaattatc gtccggttgc ggacgctgtt gccatgctgc tggcaggtaa
    14461 caaactgagc aatgacgaac tgaacatgct tggcgagatg atcggcgagc aggatatcga
    14521 gccgctgttg caagcagcaa acagcgacag cgaagatgcc cagagcgccc gtcaggagct
    14581 ggtttcgatg ctgatggatc gccacggcac cagccgcgtg ctgttccgta acacgcgtaa
    14641 cggtgtgaaa ggcttcccga aacgcgagct gcacaccatt aagctgccgc tgccgacaca
    14701 gtatcagacg gctattaaag tctccggcat tatgggcgca cgcaaaagtg cggaagaccg
    14761 cgcccgcgat atgctctacc cggagcgtat ttatcaggaa tttgaaggtg ataatgccac
    14821 ctggtggaac ttcgatccac gcgttgagtg gctgatgggc tacctgacca gccatcgctc
    14881 tcagaaagtg ctggtgatct gcgctaaagc tgccactgcg ctgcaactgg agcaggtact
    14941 gcgcgaacgt gaaggtattc gcgctgcggt gttccacgaa ggtatgtcga ttatcgaacg
    15001 tgaccgcgct gccgcctggt ttgccgaaga agacaccggc gcacaggtac tgctgtgctc
    15061 ggaaatcggt tctgaaggac gtaacttcca gttcgccagc cacatggtga tgtttgacct
    15121 gccattcaac ccggatctgc tggagcagcg tattggtcgt ctggatcgta tcggccaggc
    15181 gcacgatatt cagatccatg tgccttatct ggagaaaacc gctcagtcgg tgctggtgcg
    15241 ctggtatcac gaaggtctgg atgcattcga gcacacctgc ccgaccggac gcactattta
    15301 cgatagcgta tacaacgatc tgattaacta tctggcttca ccggatcaaa ccgaaggctt
    15361 tgacgatctg atcaaaaatt gccgcgagca acatgaagcg ctgaaagcac aactggaaca
    15421 gggtcgtgac cgcctgctgg aaatccactc caacggtggc gaaaaagccc aggcactggc
    15481 agaaagcatt gaagagcagg atgacgatac caacctgatc gccttcgcca tgaacctgtt
    15541 cgatattatc ggtatcaatc aggacgatcg cggcgacaac atgatcgtgc tgacgccgtc
    15601 cgatcatatg ctggtgccgg acttccctgg cctgtcggaa gatggcatca ccatcacctt
    15661 tgatcgtgaa gtggcgctgg cgcgtgaaga tgcgcagttt attacctggg aacatccgct
    15721 gatccgcaac ggtctggatc tgatcctttc tggcgatact ggtagcagca cgatttcact
    15781 gttaaaaaac aaagcgttgc cggtaggtac gctgttggtg gaactgattt atgtcgttga
    15841 agcccaggct ccgaagcagt tgcagctcaa ccgcttcctg ccaccgacgc cggtacgtat
    15901 gctgctggat aaaaacggca acaacctggc ggcgcaggta gagtttgaaa cctttaaccg
    15961 ccagcttaac gcggttaacc gtcacaccgg cagcaaactg gttaacgccg tgcagcagga
    16021 tgttcacgct atccttcaac tgggtgaagc gcagatcgag aaatctgccc gtgcattgat
    16081 tgatgcagcg cgtaacgaag ccgacgaaaa actgtctgcc gagctgtctc gtctggaagc
    16141 gctgcgtgca gttaacccga acattcgtga cgacgaactg accgccattg agagcaaccg
    16201 tcagcaggta atggaaagcc tggatcaggc aggctggcgt ctggatgccc tgcgtttgat
    16261 cgttgtaacg catcagtaac ggagccgaaa atggggatgg aaaactacaa tccaccgcag
    16321 gaaccctggt tggttatcct gtatcaggat gaccatatta tggtggtcaa caagcggagc
    16381 ggtttgttgt cagtgccggg tcgtctggaa gagcacaaag acagcgtgat gacgcgcatt
    16441 cagcgtgatt atccgcaggc agaatcggtg catcgtctgg atatggctac cagcggcgtg
    16501 attgtagtgg cgctgaccaa agccgcggag cgggagttaa aacgccagtt ccgcgagcgc
    16561 gagccgaaaa agcagtatgt ggcccgcgtc tgggggcatc catcccctgc ggaaggtctg
    16621 gtggatctgc cgctgatttg cgactggcca aaccgcccga aacagaaagt ctgttacgaa
    16681 acgggtaaac ctgcgcagac ggaatatgaa gtggtggagt atgcggcgga taacacggca
    16741 agagtggtgt taaaaccgat taccgggcgt tcgcatcagc tgcgtgtgca tatgctggcg
    16801 ctgggtcatc cgattctcgg cgatcgtttt tatgcatcac cagaagcgag agcgatggca
    16861 ccgcgtttgt tgctacatgc agagatgttg acgattaccc atccggcgta tggcaatagt
    16921 atgacgttta aagcgccagc ggatttttaa tcgtcacgct ggcgcagttc ggtaggcgga
    16981 taaggcgttc acgccgcatc cggcaattgt gcgccgattg cctgatgcga cgcgggccgc
    17041 gtcttatcag gcctacagtt taaaacttat ttaaaccctt tctgctgctt tatcagctca
    17101 tatgcctgct gaatttcctg cgctttctgc ttcgccatct ccatcatctc aggcggcaaa
    17161 cctttcgcca ccagcttatc gggatggtgt tcactcatca gcttacggta ggctcgttta
    17221 atggtggtcg catcatccgt cggcttcaca cccagcacat tacaggcatc ttccagcgtc
    17281 gggccacgct gcgcttgctg ccagttacca ccgccagatt gctgctgata accgccgcca
    17341 aactgtgcac cgccctgcat catgcgcaaa aactggtcaa actgggcgcg ggagatccct
    17401 aattcttcag caatgacata cagcaccgcc cgttcattcg ggtgcagtga accatcagca
    17461 aacgccgcct gaatctggat ctccagaaac atacgaatta agtcaaaacg accaaagcag
    17521 acactgcgaa actggcgcat cttttcgcgc agcgggtaat tgtctgattt tcccacccgg
    17581 aacgcgtttt gcgccgcagt acgggaagcg ccatgaaggt tcattcggtc catcaactgg
    17641 ctggcgatat gaatatcagc ctccgtgacg cgacctttgg atttggttaa atgccccatc
    17701 acttcaaaag tggtggcaaa aaacagcgcc tgacgctcac gctggttggc gaaccacgcc
    17761 attttacggc tacgggcttt atcaaacata tggccaatta acaggcctaa cactacgccc
    17821 caaaagccgc cgcccatcag taaggccacg gccacgccaa tgatttttcc ccaatactgc
    17881 atatattccc caaatcgaca cacggatatc agggctatct cccacaatat aaaggtgctt
    17941 ttaccgtttt ccggctgcgg tcaattgtgg gacatcgcct ataatttgca ttatcatacc
    18001 tgtcattcaa tgccgtgcct aacaccactg acgctattcg gacaggatta acactagcgt
    18061 agagatgacg agtacgttag tctctgaccg tttgtcacgc gcaacgttac cgatgatgga
    18121 acaataaaat caacgtatga aaaaacgtat ccccactctc ctggccacca tgattgccac
    18181 cgccctttat agtcaacagg gactggcagc cgacctcgcc tcacagtgca tgttgggcgt
    18241 gccaagctat gaccgtcctc tggtacaggg cgataccaat gacttacccg tgactatcaa
    18301 tgctgaccac gcgaaagggg actacccgga tgacgccgtg tttactggca gcgtggatat
    18361 catgcagggt aacagccgtc tgcaggccga cgaagtgcag ctccatcaaa aagaggcacc
    18421 aggacaaccg gagccggtac gaaccgttga tgcgctcggt aatgtccatt acgacgataa
    18481 ccaggtgatc ctcaaagggc cgaaaggctg ggcgaatctg aacaccaaag ataccaacgt
    18541 ctgggaaggt gattaccaga tggtgggtcg ccagggtcgc ggtaaagcgg acctgatgaa
    18601 acaacgtggc gaaaaccgct ataccattct ggataacggt agctttacct cctgtctgcc
    18661 gggttctgac acctggagcg tggtaggtag cgaaattatt catgaccgcg aagaacaagt
    18721 tgcggagatc tggaacgccc gctttaaggt gggtccggta ccgatctttt atagccccta
    18781 tttgcagttg ccggtgggtg acaaacgccg ctctggtttc ttgatcccga acgccaagta
    18841 caccaccacc aactacttcg agttctatct gccatattac tggaacatcg cgccaaatat
    18901 ggatgccacc atcacgccgc attatatgca tcgtcgtggc aacatcatgt gggagaacga
    18961 attccgctac ctctcccagg cgggcgctgg cttgatggaa ctggactatc tgccttcaga
    19021 taaagtctat gaagatgaac acccgaacga tgacagttca cgtcgttggt tgttctactg
    19081 gcaacactcc ggggtcatgg atcaggtgtg gcgtttcaac gtcgactaca ccaaggtcag
    19141 cgatcctagc tacttcaatg atttcgataa caagtacggt tccagtactg acggctacgc
    19201 aacgcaaaaa ttcagcgttg gctatgcggt gcaaaacttc aatgccaccg tttcaaccaa
    19261 gcagttccag gtctttagcg agcagaacac cagtagctac tcggcagagc cgcagttaga
    19321 cgttaactac taccagaatg atgttggtcc gtttgatacg cgtatttacg gccaggcagt
    19381 gcactttgtt aacaccagag acgacatgcc tgaagcaacc cgtgttcacc tggaaccgac
    19441 catcaatttg ccgctctcta ataactgggg cagcatcaat accgaagcga agttgctggc
    19501 aacccattat cagcaaacca atcttgactg gtataactcc agaaacacga ccaagctgga
    19561 cgaatccgtt aaccgcgtaa tgccgcaatt caaagttgac ggcaaaatgg tctttgaacg
    19621 cgatatggaa atgctggctc cgggttatac ccaaacgctg gaaccgcgcg cgcagtattt
    19681 gtacgtgccg tatcgcgatc agagcgacat ctataactac gactcctctc tgctgcaatc
    19741 tgactactct ggcctgttcc gggaccggac ttacggcggt cttgaccgta ttgcctccgc
    19801 taaccaggtg acgaccggtg tcacatctcg catatatgat gatgctgccg ttgaacgttt
    19861 taatatttcc gttggtcaaa tctactattt cacggagtct cgcactggcg atgacaacat
    19921 aacatgggag aatgacaaca aaacgggctc actggtgtgg gcaggcgata cttactggcg
    19981 aatctccgag cgttggggat tgcgtggcgg gattcagtac gatacacgtc tggataacgt
    20041 agcgaccagt aactccagca ttgaataccg tcgggatgaa gaccgtctgg tacagctgaa
    20101 ttaccgttac gccagcccgg aatatattca ggctacgctg cctaagtact attccactgc
    20161 tgagcaatat aagaatggta tttcgcaggt aggtgccgtc gccagctggc caattgccga
    20221 tcgttggtca attgttgggg cctactacta cgacaccaat gcgaacaagc aagccgactc
    20281 tatgttaggt gtgcaataca gctcctgctg ctatgcaatt cgcgtcggtt acgagcggaa
    20341 gctgaacggt tgggataacg ataaacaaca tgcggtatat gacaacgcaa tcggctttaa
    20401 catcgaactt cgcggcctga gctccaacta cggtctgggt acgcaagaga tgctgcgttc
    20461 gaacattctg ccgtatcaaa acactttgtg atttgttgat ttaccacgta atccgcagtg
    20521 cggttaattg aaatggaaaa agtatgaaga actggaaaac gctgcttctc ggtatcgcca
    20581 tgatcgcgaa taccagtttc gctgcccccc aggtagtcga taaagtcgca gccgtcgtca
    20641 ataacggcgt cgtgctggaa agcgacgttg atggattaat gcagtcggta aaactgaacg
    20701 ctgcgcaggc aaggcagcag cttcctgatg acgcgacgct gcgccaccaa atcatggaac
    20761 gtttgatcat ggatcaaatc atcctgcaga tggggcagaa aatgggagtg aaaatctccg
    20821 atgagcaact ggatcaggcg attgctaaca tcgcgaaaca gaacaacatg acgctggatc
    20881 agatgcgcag ccgtctggct tacgatggtc tgaactacaa cacctatcgt aaccagatcc
    20941 gcaaagagat gattatctct gaagtgcgta acaacgaggt gcgtcgtcgc atcaccatcc
    21001 tgccgcagga agtcgaatcc ctggcgcagc aggtgggtaa ccaaaacgac gccagcactg
    21061 agctgaacct gagccacatc ctgatcccgc tgccggaaaa cccgacctct gatcaggtga
    21121 acgaagcgga aagccaggcg cgcgccattg tcgatcaggc gcgtaacggc gctgatttcg
    21181 gtaagctggc gattgctcat tctgccgacc agcaggcgct gaacggcggc cagatgggct
    21241 ggggccgtat tcaggagttg cccgggatct tcgcccaggc attaagcacc gcgaagaaag
    21301 gcgacattgt tggcccgatt cgttccggcg ttggcttcca tattctgaaa gttaacgacc
    21361 tgcgcggcga aagcaaaaat atctcggtga ccgaagttca tgctcgccat attctgctga
    21421 aaccgtcgcc gatcatgact gacgaacagg cccgtgtgaa actggaacag attgctgctg
    21481 atatcaagag tggtaaaacg acttttgctg ccgcagcgaa agagttctct caggatccag
    21541 gctctgctaa ccagggcggt gatctcggct gggctacacc agatattttc gatccggcct
    21601 tccgtgacgc cctgactcgc ctgaacaaag gtcaaatgag tgcaccggtt cactcttcat
    21661 tcggctggca tttaatcgaa ctgctggata cccgtaatgt cgataaaacc gacgctgcgc
    21721 agaaagatcg tgcataccgc atgctgatga accgtaagtt ctcggaagaa gcagcaagct
    21781 ggatgcagga acaacgtgcc agcgcctacg ttaaaatcct gagcaactaa tggttaaaac
    21841 ccaacgtgtt gtgatcactc ccggcgagcc cgccgggatt ggcccggact tagttgtcca
    21901 gcttgcacag cgtgagtggc cggtcgaact ggttgtttgt gccgatgcca ctctccttac
    21961 cgaccgggca gcgatgctcg gtttgccgct caccctccgc ccttattccc ccaactcccc
    22021 tgcacaaccg caaactacgg gcacattaac gctacttcct gtcgcactac gtgaatctgt
    22081 cactgcgggg cagttagcga ttgaaaatgg gcattacgtg gtggagacgc tggcgcgagc
    22141 gtgtgatggc tgtctgaacg gtgaatttgc tgcgctgatc acaggccccg tgcataaagg
    22201 cgtcattaac gacgcaggca ttccgtttac cggtcatacc gagtttttcg aagagcgttc
    22261 gcaggcgaaa aaagtggtga tgatgctggc gaccgaagaa cttcgcgtgg cgctggcaac
    22321 gacgcattta ccgctgcgcg atatcgcaga tgctatcacc cctgcacttt tgcacgaagt
    22381 gattgctatt ttgcatcacg atttgcgtac aaaatttggt attgccgaac cgcgcattct
    22441 ggtctgcggg ctgaatccgc acgcgggcga aggcggtcat atgggtacgg aagagataga
    22501 caccattatt ccggtgctcg acgagctgcg ggcgcagggg atgaaactca acgggccgct
    22561 gcctgccgat accctgtttc agccgaaata tctcgataac gccgacgccg tgctggcgat
    22621 gtaccacgat cagggtcttc ccgtgctaaa ataccagggc ttcgggcgcg gtgtgaacat
    22681 tacgctgggc ctgcccttta ttcgcacatc agtggaccac ggcaccgcgc ttgaactggc
    22741 gggacgtggc gaagccgatg tcggcagttt tattacggcg cttaatctcg ccatcaaaat
    22801 gattgttaac acccaatgaa taatcgagtc caccagggcc acttagcccg taaacgcttc
    22861 gggcaaaact ttctcaacga tcagttcgtg atcgacagca ttgtttctgc cattaacccg
    22921 caaaagggcc aggcaatggt cgaaatcggc cccggtctgg cggcattgac cgagccggtc
    22981 ggcgaacgtc tggaccagct gacggtcatc gaacttgacc gcgatctggc ggcacgtctg
    23041 caaacgcatc cattcttagg cccgaaactg acgatttatc agcaggatgc gatgaccttt
    23101 aactttggcg aactggccga gaaaatgggt cagccgctgc gtgttttcgg caacctgcct
    23161 tataacatct ccacgccgtt gatgttccat ctgtttagct atactgatgc cattgccgac
    23221 atgcacttta tgttgcaaaa agaggtggtg aatcgtctgg ttgcaggacc gaacagcaaa
    23281 gcgtatggtc gattaagcgt catggcgcaa tactattgca acgtgatccc agtgctggaa
    23341 gtaccgccgt cagcctttac accaccaccc aaagtggatt ccgccgtcgt gcgcctggtt
    23401 cctcatgcaa cgatgcctca cccggttaaa gatgttcgtg tgttgagccg catcaccacc
    23461 gaagccttta accagcgtcg taaaaccatt cgtaacagcc tcggcaacct gtttagcgtc
    23521 gaggtgttaa cgggaatggg gatcgacccg gcgatgcgag cggaaaatat ctctgtcgcg
    23581 caatattgcc agatggcgaa ctatctggcg gagaacgcgc ctttgcagga gagttaacga
    23641 tgatcaattc gccccgagtg tgtattcagg ttcaaagcgt ctacattgag gctcaatctt
    23701 cacctgataa tgaacgttac gtttttgctt ataccgtaac catacgcaat ctggggcgag
    23761 cgccagtgca gttgttgggg cgttactggc tgatcaccaa tggcaatggc cgtgaaaccg
    23821 aagtccaggg cgaaggagtg gttggcgtcc agccacttat cgcgcctggc gaagagtacc
    23881 agtacaccag cggtgcaatc attgaaaccc cgctgggcac catgcagggt cactacgaaa
    23941 tgatcgatga aaatggcgtc cctttcagca tcgacattcc cgtattccga ctcgccgttc
    24001 ccacactcat tcattaaaag aatatggcga cataccttat tggcgacgtt catggttgtt
    24061 acgatgaact gatcgcattg ctgcataaag tagaatttac ccctgggaaa gataccctct
    24121 ggctgacggg cgatctggtc gcgcgcggcc cgggttcgct ggatgttctg cgctatgtga
    24181 aatccttagg cgacagcgta cgtctggtgc tgggcaatca cgatctgcat ctactggcgg
    24241 tatttgccgg gatcagccgc aataaaccga aagatcgcct gacaccgctg ctggaagcgc
    24301 cggatgccga cgagctgctt aactggctgc gtcgccagcc tttgctgcaa atcgacgaag
    24361 agaaaaagtt ggtgatggcc cacgcaggga tcacgccgca gtgggatcta cagaccgcca
    24421 aagagtgcgc gcgcgatgta gaagcggtgc tatcgagtga ctcctatccc ttctttcttg
    24481 atgccatgta cggcgatatg ccaaataact ggtcaccgga attgcggggg ctgggaagac
    24541 tgcgttttat caccaacgcc tttacccgta tgcgtttttg cttcccgaac ggtcaactgg
    24601 atatgtacag caaagaatcg ccggaagagg cccctgcccc actgaaaccg tggtttgcga
    24661 ttcctggccc tgtcgctgaa gaatacagca tcgcctttgg tcactgggca tcgctggagg
    24721 gcaaaggtac gccggaaggt atatacgcgc tggataccgg ctgctgctgg ggtggtacat
    24781 taacctgcct gcgctgggaa gataaacagt attttgtcca gccgtcgaac cggcataagg
    24841 atatgggcga aggagaggcg gttgcgtctt aaatcccatc gagcataaaa tctaatgctc
    24901 ctttaatcaa cattcggtgc gtgctggcat cgcaaaattt cgttcccagc gcgttaactg
    24961 gaacagttgc agtctcatgc gtcatgagca catattcttt gccgtctacc agtaaaagga
    25021 ttgggttaag ccgttctggt gggcgaatac ggctaaatcg ttcaataggt gttaatggaa
    25081 taacaatacg gcgattaatc tcaccaataa tgtcgctggt aacatcgata acaaagggaa
    25141 acgcggcgtt cctgctgcga ctgcggtata ccgtaaattg catcgctaga agctccggta
    25201 ctcctcagag aaacatccgg tttcatcagc caattgattt aacgcagcga tagcttctgc
    25261 gttctcttca cgccaacgtg ttgctgcatg ttttttaagt tcagcattga gcgcaaccgt
    25321 aagggtggcg ctcatattta agcctgcatc acgagcgcga ttgactaact cacggtcgac
    25381 ggtgacggtc acactttgtg tggtacgttt tgcagtcata atatcgtgct cctgtacaat
    25441 ttatacgtct agtatacacg gatatctgca cgtatcagtg atgccggaat tctaatatac
    25501 aaaattaccg ccgctccaga atctcaaaac aatagctgtg agagttctgc gcatcagcgt
    25561 cgtggaattc gctgaatacc gattcccagt catccggctc gtaatccggg aaatgggtgt
    25621 cgccttccac ttctgcgtcg atatgcgtca gatacagttt ttgcgctttt ggcaggaact
    25681 gctcataaac gcgaccgccg ccaatcacca tgatttctgg tacgtcacca cacgcagcaa
    25741 tggcttcatc aaccgatttc acccacgtta cgcgatcatc cgtacccggt tgactgctga
    25801 ggataatatt tttgcgtcct ggcaacggac gaccgatgga ttcccaggta tggcggccca
    25861 taatcacggg tttatttaag gtgttgcgtt taaaccaggc gagatcggca ggcaggttcc
    25921 acggcatggc gttttccatg ccgataacgc gatctaccgc taacgccgca atcagactaa
    25981 tcattgagat ttcccgataa aaaaaattgt cgccactata cgtaaagcgt aaaccgtcgt
    26041 cgactggtgc gaggatgatg ttgaggaaaa ttttatattc tgctggcgag tccacgctct
    26101 ccccctggac tcgccgcatt acaatgaaac aaaaacaagc agttagctgt aaagcgtgat
    26161 ttacgtcact ctttattagg atgagggttt cgtttccggt tcatccgcca tgttgccggt
    26221 atgtttacct tcttctgttc cctgccagcc atgtcgttga attaatgaca gatgttcgcg
    26281 gtcctcggtg atgatctcac ttaacatcgc gctggtgcgt ttatagaccg ccgcgcggac
    26341 tttggtgtca ttctcaacca ttgccatctc ttccaccatc tgaatattaa agcggcggaa
    26401 cacatcggca cgttctcgcg cttcatacgg ccccagacct aaactttcca gcgccagacg
    26461 cccggttttc agcgcacctt caaaggtttc acgctccggc gtttcaacgc ctgcctgacg
    26521 caaacgaatg tagtggtcga catcgcgggc gcgggcaata atctgcaaat gcgggaaatg
    26581 ttctttcacc atctccgtca gttgcaggtt ggtttgcgga tcgtcaatag cattaatcag
    26641 cacttccgct ttcgccgctc cggcagattc cagtaaatcc atccgcgtgg catcgccgta
    26701 aaacactttc ataccaaatt tacgcagcgt ttcgatatgg tccggatcgt gatcgagcac
    26761 caccattttc accccgctgg agagcagtaa acgtccggta atctgtccaa aacgaccgaa
    26821 tccggcgata atcacgcgcg gctgttcttc atcgatctca tcggcttcac gcgcttcctc
    26881 agtagaagat tgctcaaggc gattgaggat caccagcaga atcggcgttg ctgccatcga
    26941 cagcgccacc gccaaggtca gcgatttcgc ccactccggc tccagcacat tcgccatctg
    27001 cgccgcgcca aataccacaa aggcaaactc actgccctgc cctaacaaca ccgcaaacca
    27061 gcgacgctgt ttatttggca cctgcaacgg tcgggcaatc agccacagca tggcgatttt
    27121 gatgatgagg aaaccgagca gcaaaatgac aatgcgcaat ggattttcaa tcagcgtgcc
    27181 aaaatctatc gacatgccaa caccgatgaa aaacagcccc aacagcaaac ctttaaatgg
    27241 ctcgatatcg ctctccagcg catgacggta ttccgagctt gccagcagta cgcccgccag
    27301 aaacgcgccc atcgccatcg acaagccgac ctcttccagc agcaaaccaa agccaaacac
    27361 gaggaataac gccacggcac taaacacttc ccgcaagcca gagcgggcta caaaacgcag
    27421 cgccggacgc gtgacatagc gccccagcaa taccaccagc accagcgcac ccgccacttt
    27481 taacgccgag agagcaaatg cgcccatcgt cgtcgaggca ctgctcgccg ccagtagcgg
    27541 aatcatcgcc accagcggga tcgccgcgat atcctggaac agcagcaccg caaaggcact
    27601 gcgacccatt tgcgtcacca tcagattgcg ttcattcatc gcctgcatgg caatcgccgt
    27661 agatgagagc gccagcgtca tgccgatcaa ttccgctacc tgccagctca gcccaagtaa
    27721 catgcagaac aaccccagca ggccgccaca aatcaccatc tgtaatgcgc caccgccgaa
    27781 cactgccgca cgcagcttcc acagcctttg tggatcgagt tcgaggccga taataaacag
    27841 catcagcacc acgccaatct cggcaaagtg cagaatagat tcggcatcgg tcaccagtcg
    27901 cagcccccac gggccaataa tgcagcctgc aatcaggtag ccaagtaccg atcccagacc
    27961 gaggcgtact gcaatgggta caatcagcgc agccgaaccg agataaatca gcgcctgaat
    28021 cagcgtatgg ctatccatga tgtgcctcct gccattccag cagacgttgc ttatagtgac
    28081 gcgcctgccc ttcgagggtt tcgtcgtcac aaataaaggt gcagtgcatg gcaaacggtg
    28141 gcagccagtt cagcccgcaa tagattgccg tcgcctgtag cggctgcgac agcacatcaa
    28201 agcccggatg cgcaccaatt tcaaaatggc ttttcccgcc gccggtcgtc accgcccaca
    28261 gcaaatgttt gccatgcagc gccgtgccac cgtgaccgta agcccagccg tgggagaaaa
    28321 ctttatcgat ccaaagtttg aggagcggag gaatgctgta ccactgcatc gggtgctgcc
    28381 agacgatcag atcgacgcga gacagcgcct cctgctcggc ggcaatatcg atattgaagt
    28441 caggatagag ttgataaaga gagcgaattt cgacgccttc cagcgtcctt gcctgttcaa
    28501 gcatccgttt attcgcatgg gaatgatgcg gatacggatg cgcataaatt atgaggatca
    28561 tagttattag cccgcgtgtt tacgcctttg ttttcccaca aagtgtagtc atatattcac
    28621 gcggcttata gtcaataata ttgattcaga aaagagagaa atctgaacaa attaccccat
    28681 tctctgcccg cggatcgtca tattgctggt ctgcgccagt gacattcctc gagtctccgg
    28741 ggcaaacgct acggaaatca acaagccaaa cagcgagata cccgccccca ttagcatcgt
    28801 gttactgata ccgtaattat tgataaagat cggtagtgcc caggtcgaaa caatggtgcc
    28861 aatacggctt aaggacataa tcacgcccac ggcagaggcg cggatatccg tcgggaagag
    28921 ttcattagga tagagccact gcaaattacc cggcccgcca gagaaaaagg catacaccgc
    28981 aaaggccatc actaccagcc agatccccat atccgggatc agccccaaaa ccgccagcgc
    29041 cagcgtcatc atggcaaagc tgccaatcaa caatggacgc cgtccggcag tgtttaacca
    29101 cagcatcggc ggaatacagc cgagcataaa gaacaggcta atcaccacat tccctagtgc
    29161 cgcgtttttg ccaaccccca atcccaacaa accaacgatt tgcgggccaa aggtgtagat
    29221 ggcgaacatc gggatcacct ggcaagtcca gatggcggca acaaacagaa caaaaggaaa
    29281 atggcggcga ttgaacagat cgcgaaaacg ggtttgctgc ggctgctctt catcgaaagc
    29341 caccggttcg ccaaacagtt ttatcatcat ctcttcgcac tcttttactc gccctttgcg
    29401 taacaaccag cggggagatt caggcagttc gaatcgacca atcaaaatca acaaacaagg
    29461 gatcgccgcg ctacccagca tccagcgcca accaccttcc acatcataaa gccagtagcc
    29521 gaccagatcg gcgcaggtcg cgccgacata ccacatcgcg gcaataaagc tgatggaaaa
    29581 cgcccgctga cgggtactgg agaactcggt gatcatcgaa gtggcgatgg gataatctgc
    29641 accgatgaca atgccgatga gtacccgcat caccaacagt tcgacggggg atgaaacaaa
    29701 catcgtcgcc accgatatca cgccgatggc gatgatatca atgaggaaca ttttgcgccg
    29761 tccgacttta tcggagatat agccaaacag cgatgtgcca acgaacagcc cggcgagcgt
    29821 tcccgcgccc agcaagccaa tccagtcagc gtccagtttc agcgccggcg tcagttgctc
    29881 cagcgccacg ccaatcatta ccagtacata accatccaga aacggaccac cgcttcccca
    29941 cagcaaaatg cggcggtgaa tagaggagaa tttgagatcg tcaaagtttc tggacggttg
    30001 catgggttat tcctgttttt ttgcaatgag agtcagtacg gcgttacgta tcaaaccaac
    30061 atcagccgta acggaactcc acaccaaagg tgccgcgcgg gtattcccac tgttccagcg
    30121 ccgaccccag ccccagaatg cgacaggtgc cgcactccag acatccggcg taatcgaagc
    30181 gcacactgcc gtcatcctgc ttcttgtaca gacctgcggg gcacgctttc accagcagct
    30241 ccagcgcctg tttatcagca tcggccttca caacaatgtg cggatgctct tcatcgacat
    30301 tgaatttatt gacgcccagt ttgacgtcca cattgacggg agaagtcata aaacggtcac
    30361 tcctttcatg ccatccttga tcagattgat gaagcccact ttcttgccgt ggcggaggat
    30421 tttcttgcgc atcagttccg gcgcactgcc gtcaatggtg aacaggtcac gcgccacgcc
    30481 caccgccagt tccgggtagc cgctaaacat gcgtgggtta tcaaggaacg ccggtagttt
    30541 ctggtacata cgcatatcgc gcagcggacc actctcaaga tgctgacgat attccgccag
    30601 tttttgctta ctgaaatcgt cgcttttcat cgctgaaagc acggtttttg ctgcggcttc
    30661 cccggcagca atcgccagat ccataccgcg aatggtaaaa ccgaggttca tacacattcc
    30721 ggcggcatca ccggcaatca atacgccgtc accaaccaac tccggcagca tgttgatgcc
    30781 tgcttctggc actacatgag cggaatattc caccagcttg ccacccgcga tcagcggtgc
    30841 aacggccgga tgttgtttga aatcttccag catttgcggc accgattttt tcgcgtcatg
    30901 cagatgatgc aaaccacaaa ccagccccag cgacagggtg ttttcattgg tataaagaaa
    30961 accgccgccc atcaggccat cggtgggtga tcccgcaaac aggcaagccg cgccctgatt
    31021 accctgcaac tgaaaacggt cttcaataac cgacttcggt aactcgatca gttccttcac
    31081 gccaaccgcc acatccgtcg gtttaacgcg ttttgccatc cccagctttt cggcaaggat
    31141 ggagttcact ccatcagcaa ggatcaccgt tttcgcttca atcacatcgc catcggcttc
    31201 tacaccgacg actttgccat cgcgctgtac gaggttatcg acgcggatcc cggtaattaa
    31261 ctgcgcgccc gcttcttcgg cctgctccat cagccaggca tcaaatttac tgcgcaaaac
    31321 ggagtaagaa cgctgggatg gcgaggtttc gtcaccgttg cagtagtcca tagtcatcgc
    31381 tgacttttcc gtcataaacg cgagtttttc atgggtgatc aggcgttcta cgggggcaga
    31441 ttcggcgaaa cctggaataa tgtgttccag actgtgggca tagagacgcc cgccggtgac
    31501 gttcttggca cctgcggaat tgccacgctc gataactaac acttgcgtac cttcgcgggc
    31561 gagcaccagt gcggcaaccg aaccggcaag ccctgcaccg acgatgatgg cgtcaaagat
    31621 atcttcggac ataagagctc cctgtcagcg gcagggccgt aatgcagccc tgccagagtg
    31681 gatcaacgcg ctaaagctgc ggtcagcgcc ggaaggatct tcacggcgtc gccaacaatg
    31741 ccgtaatccg cgtactggaa gatcggcgca tttttatctt tattgatggc gaaaatggtt
    31801 tgcgacgcgt tagcgccaac catgtgctgg atctgcccgg agatccccac cgccaggtac
    31861 agttcaggtt tcagcatcag gttggagata ccgacatagc gttcgtgctc catccatttt
    31921 tcgttttccg ccaccggacg agaacaggcc aactccgcac ctatcgcctt gcaaagctgt
    31981 tctgccagcg caatgttctc tttgctgcca ataccgcgac cgacgctgac caccagacgg
    32041 gctttgtcga gatcgacgct gttgctctgg cgcgcctggg ttgccgtgcg ggtaatcgcc
    32101 acagccggag cctgccactc cacggtgtgc gtttcgccag tgcgtgacgc gtctggctga
    32161 gccgcatcga acgtgccgct gctgatggtc agtaccgcat acggcgtggc aatgcgttct
    32221 tcgccaatcg ccagaccgcc gtaaaccatg tgtttcactg ttgctttacc gtcctgtacg
    32281 ctgacggtgc tggcatcgtt agacaccgcc gctttaaggc gataacccag ttttgccgcc
    32341 agtaatttgc cgcgacgggt gtttggcaac agcaccagac cgtctgcgcc gtgctggcga
    32401 atagtgtcag ccatgacacc ggcgtaatct tcgatcatcc gatcgtccgg tttgccgttt
    32461 aatttccaga catgattagc gccgagctgg attgcctgtg cgccgtcggc atcattgagg
    32521 acaaaggtgt tgatttgatt agctaaagcc tgcgcaccgt tcatcagttc cggcagacga
    32581 gaaggggtat cgctgaatac ccagacttga gaaaacgtgt tcatagcatc ccctgtaatt
    32641 aaatgacttt gcgaagattt tcagcaaatg cggcgatctg ttcttcgccg tcgccttcaa
    32701 tcacgatgcg ctgacgctcg cgctgtttcg gcgcggcaac ctgttgttct gaccaggctg
    32761 cctctgcgtt gaaaccgata tccgccgccg accatacctg gactggcttt ttcgccgcgc
    32821 cgagaatggc tttcatcgaa ggaatttgtg gggagttgat atcagtggaa acagcaacaa
    32881 ccgcaggcag cggaatgctt aaggtttcgg tttcatcttc cagttcgcgc tcaacggtga
    32941 gggtatctgc cgtcagggag ataattttgc tgacgccgtt aactgccgga atattgagga
    33001 tttcgcctac cagcaaacca acctgctggg cataaaggtc ggaagaacca tcgccacaga
    33061 ggatcaaatc aaagcctgct ttctgagcgg cggcagccag tgcgctcgcc gtttgttgcg
    33121 gcagtgcctg ctcaaactgg tcatcaatca ccacaatcag ttcatccggg ccgcgcgata
    33181 gcacatcttt acgccctttg gcgttggtca gggctttacc gcccacactt agggccgtca
    33241 cctgcgcctc tgctgcctgt tgctttagct ggcaagccgc ttcaatagcg ttcagatcgt
    33301 attggcttat tttggcatcg gctttgctga agtctaacga accatcagca ttattgaccg
    33361 caatatcctg ttcatcaggc acgcacttat agcaagtaat aatcttcatt gcatctccag
    33421 aaatcatgaa ggaaacgtcg ttcatatcgg tggtgttaat tacagatatc acgcccttta
    33481 atttggaaat aaaactttaa tcaccaatat tgaaaatgtc acacgcagat aaatccaact
    33541 ttcaatattg ttaagtccct caccaatatt gaaaacatgg cgtagcaaaa agaaattttc
    33601 aatattgttt tatggatcac caatattgaa agtcagatgc tattttttac tcacaacaga
    33661 acataatcaa ctgattaata atcaaaatta acgagaaaag cgccctctat tcacccgaaa
    33721 caaaaatgtg acaacaatca cagaatgcag cttattgaat acccattatg agttagccat
    33781 taacgcgtcc acgaggttaa taataattat attaaatgtt agcaaaaata aaacaaacgg
    33841 gaacacaaaa taaatattcg ttttcacagt ggaattaact catgacgaat gaaaagagaa
    33901 aaacgggaat agaaccgaag gttttctttc cgccattaat aatcgtcggc atactttgtt
    33961 ggcttacagt cagagatctg gatgcagcga atgtcgttat taatgctgta ttcagttacg
    34021 tcaccaatgt atggggatgg gcatttgaat ggtatatggt ggtgatgctt ttcggttggt
    34081 tctggctggt gtttagcccg tatgccaaaa agcgtttagg taacgaacca cctgaattta
    34141 gtaccgccag ttggatcttt atgatgttag cctcctgtac gtctgctgcc gtactgttct
    34201 ggggatcgat tgagatctac tactacatct ccaccccgcc gtttggctta gaaccgaact
    34261 cgacaggggc gaaagagttg gggctggctt acagcttgtt ccactgggga cctctgccgt
    34321 gggccactta cagcttcctt tcagtcgcct tcgcttactt cttctttgtc cgcaaaatgg
    34381 aagtgattcg ccccagctcg acactagtgc cgctggtagg tgaaaaacac gccaaagggt
    34441 tgttcggcac tatcgtcgac aacttctatc tcgtcgcctt gatcttcgcg atgggtacca
    34501 gtctgggcct tgccacgccg ctggtgaccg agtgtatgca atggttgttt ggcattccgc
    34561 ataccctgca actggacgct atcatcatta cctgctggat tatcctcaac gccatttgcg
    34621 tcgcttgcgg tctgcaaaaa gggggacgta tcgccagtga cgtgcgtagt tacctgagct
    34681 tcctgatgct gggttgggtg ttcattgtca gcggtgccag cttcatcatg aactacttca
    34741 ccgattcggt ggggatgttg ctgatgtatc tgccgcgcat gttgttctat accgatccca
    34801 tcgctaaagg cggcttcccg cagggctgga ccgtgttcta ctgggcatgg tgggtgattt
    34861 atgctatcca gatgagtatc ttcctcgccc gcatctcccg tggtcgtact gtgcgtgaac
    34921 tgtgcttcgg catggtgctg gggctgacag cgtcaacctg gatcctgtgg actgtactcg
    34981 gtagtaacac tctgctgttg atagataaaa acattatcaa cattccaaat ctgatcgaac
    35041 agtacggtgt ggcgcgcgcc attatcgaaa cctgggccgc tctgccactc agcaccgcca
    35101 ccatgtgggg cttcttcatc ctctgcttta ttgccaccgt tacgctggtt aacgcctgct
    35161 cttataccct ggcgatgtcc acttgccgcg aagtacgcga tggtgaagaa ccaccgctgc
    35221 tggtgcgtat cggttggtca attctggttg gcattatcgg tattgttttg ctggcgctcg
    35281 gcggcctgaa accgattcaa actgccatta tcgccggagg atgcccgctg ttcttcgtca
    35341 acattatggt gacgctctcc tttattaaag acgcgaaaca gaactggaaa gattaattaa
    35401 cccccaaaat atcaagaggt tgaaagatgg attttaattt aaatgatgag caggaactgt
    35461 ttgtcgccgg tatccgcgaa ctgatggcca gcgaaaactg ggaggcctat tttgccgagt
    35521 gcgaccgtga cagcgtctac ccggaacgtt ttgtcaaagc actggcggat atgggtatcg
    35581 acagtctgct gatccctgaa gagcacggtg gtctggacgc ggggtttgtt actctcgccg
    35641 ccgtgtggat ggagctggga cgtctggggg caccaaccta tgtgctgtac cagttgccgg
    35701 gcgggttcaa caccttcctg cgcgaaggca cacaagagca gatcgacaaa attatggctt
    35761 tccgcggcac cggtaagcag atgtggaact cagcgattac cgaaccgagc gcgggctccg
    35821 acgtgggtag cctgaaaacg acttataccc gtagaaatgg taagatttat cttaatggta
    35881 gtaagtgttt tattaccagc agcgcctaca ccccgtacat cgtggtgatg gcgcgcgacg
    35941 gggcttctcc ggacaaacct gtctacaccg aatggtttgt tgatatgagc aaaccgggca
    36001 tcaaagtgac caaacttgaa aagctcggtc tgcgtatgga tagctgctgt gaaatcacct
    36061 ttgacgacgt ggaactggac gagaaagaca tgttcggccg ggaaggtaac ggctttaacc
    36121 gcgtcaaaga agagttcgac catgaacgtt tcctggtagc cctcaccaac tacggtacgg
    36181 cgatgtgcgc ctttgaagat gcggcgcgct acgccaacca gcacgtgcag tttggcgagg
    36241 ctattggtcg tttccagttg attcaggaaa aattcgccca catggcgatc aaattaaact
    36301 ccatgaaaaa catgctgtat gaagcagcgt ggaaagcaga caacggcacc atcacctctg
    36361 gcgatgcagc gatgtgcaaa tacttctgcg ccaatgcggc atttgaagtg gtggatagcg
    36421 caatgcaggt gctgggcggt gtcgggattg cgggcaacca ccgcatcagc cgcttctggc
    36481 gtgatctgcg tgtagaccgc gtctccgggg gatctgacga aatgcagatc ctgacgctgg
    36541 gtcgtgcggt gctgaagcaa taccgctaag tccgtgcgct gcctgatgcg acgctgacgc
    36601 gtcttatcag gcctacggga gcacgaatgt aggccggata aggcgtttac gccgcatccg
    36661 gcagtcatgc gctacataaa tttttcagga gcaaataatg gatcatctac ccatgccgaa
    36721 attcgggccg ttggccggat tgcgcgttgt cttctccggt atcgaaatcg ccggaccgtt
    36781 tgccgggcaa atgttcgcag aatggggcgc ggaagttatc tggatcgaga acgtcgcctg
    36841 ggccgacacc attcgcgttc aaccgaacta cccgcaactc tcccgccgca atttgcacgc
    36901 gctgtcgtta aatattttca aagatgaagg ccgcgaagcg tttctgaaat taatggaaac
    36961 caccgatatc ttcatcgaag ccagtaaagg tccggccttt gcccgtcgtg gcattaccga
    37021 tgaagtactg tggcagcaca acccgaaact ggttatcgct cacctgtccg gttttggtca
    37081 gtacggcacc gaggagtaca ccaatcttcc ggcctataac accatcgccc aggccttcag
    37141 tggttacctg attcagaacg gtgatgttga ccagccaatg cctgccttcc cgtataccgc
    37201 cgattacttt tctggcctga ccgccaccac ggcggcgctg gcagcactgc ataaagtgcg
    37261 tgaaaccggt aaaggcgaaa gtatcgacat cgccatgtac gaagtgatgc tgcgtatggg
    37321 ccagtacttc atgatggatt acttcaacgg cggcgaaatg tgcccgcgca tgagcaaagg
    37381 taaagatccc tactacgccg gttgcggtct gtataaatgt gccgacggct acatcgtgat
    37441 ggaactggtg ggcattaccc aaattgaaga gtgctttaaa gatattggcc tcgcacatct
    37501 actcagtacg ccggaaatcc cggaaggcac tcagcttatc caccgtatcg aatgccctta
    37561 cggcccactg gtagaagaaa aactcgatgc ctggctggcg gcacatacca tcgcagaagt
    37621 taaagaacgc tttgccgaac tgaatatcgc ctgtgccaaa gtactgaccg taccggaact
    37681 ggaaagcaat ccacagtatg ttgcccgtga atcaatcact cagtggcaaa cgatggatgg
    37741 tcgcacctgc aaagggccga acatcatgcc gaaattcaaa aataaccccg gacaaatctg
    37801 gcgcggaatg ccctcacatg gcatggacac ggctgccatt ttgaaaaata tcggctacag
    37861 cgaaaacgac attcaggagt tggtcagcaa aggtctggcc aaagttg
//
LOCUS       DAJVTL010000025        36853 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.025, whole genome shotgun sequence.
ACCESSION   DAJVTL010000025 DAJVTL010000000
VERSION     DAJVTL010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36853
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.025"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..862)
                     /locus_tag="OQQ26_001229"
     CDS             complement(<1..862)
                     /locus_tag="OQQ26_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1856744.1"
                     /translation="MQIQPDDKTTCSRLKKNGDAQIVASFSDEGLSGYKGKHLTGQFG
                     DMLARIEAGEFPEGTILLVESIDRIGRLEHLETEALMNRILGNGIEIHTLQDGLIYTK
                     DALADDLGISIIQRVKAYIAHQESKQKSFRVSQKWEQRAKLALAGEQRLTKMVPGWID
                     PETFKLNEHAETVRLIFKLLLDGESLHNIARHLQSNGIRPFSRRKDANGFSVHSVRTI
                     LRSETTIGTLPASQRNDRPAIPNYYEAAIDASTFNKAQEILDKNRKGRTPASDNPLTI
                     NIFKGLFRCQC"
     gene            1008..1727
                     /gene="tonB"
                     /locus_tag="OQQ26_001230"
     CDS             1008..1727
                     /gene="tonB"
                     /locus_tag="OQQ26_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HCS1856745.1"
                     /translation="MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQP
                     ISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKP
                     VKKVQEQPKRDVTPVESRPASPFENTAPARPTSSTATAATSKPVTSVASGPRALSRNQ
                     PQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPG
                     KPGSGIVVNILFKINGTTEIQ"
     gene            complement(1767..2165)
                     /gene="yciA"
                     /locus_tag="OQQ26_001231"
     CDS             complement(1767..2165)
                     /gene="yciA"
                     /locus_tag="OQQ26_001231"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HCS1856746.1"
                     /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSISINIEVWVKKVASE
                     PIGQRYKATEALFKYVAVDPEGKPRALPVE"
     gene            complement(2270..2809)
                     /locus_tag="OQQ26_001232"
     CDS             complement(2270..2809)
                     /locus_tag="OQQ26_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HCS1856747.1"
                     /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
                     RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
                     RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGIYIYRHMPQEDKS"
     gene            complement(2839..3582)
                     /locus_tag="OQQ26_001233"
     CDS             complement(2839..3582)
                     /locus_tag="OQQ26_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HCS1856748.1"
                     /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
                     DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL
                     IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
                     APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
                     GAVLANTLSNLISAILLIYLFRLYMLIRQ"
     gene            complement(3610..3699)
                     /locus_tag="OQQ26_001234"
                     /pseudo
     CDS             complement(3610..3699)
                     /locus_tag="OQQ26_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            3938..4576
                     /gene="ompW"
                     /locus_tag="OQQ26_001235"
     CDS             3938..4576
                     /gene="ompW"
                     /locus_tag="OQQ26_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HCS1856749.1"
                     /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
                     TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
                     TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
                     VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF"
     gene            complement(4636..5142)
                     /locus_tag="OQQ26_001236"
     CDS             complement(4636..5142)
                     /locus_tag="OQQ26_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HCS1856750.1"
                     /translation="MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQ
                     HLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYV
                     FEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQHIPQTTEKFLIRSE
                     TDDVEAKK"
     gene            complement(5188..5688)
                     /locus_tag="OQQ26_001237"
     CDS             complement(5188..5688)
                     /locus_tag="OQQ26_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HCS1856751.1"
                     /translation="MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAF
                     HAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAAL
                     IAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNK
                     KAENKA"
     gene            complement(5774..5953)
                     /locus_tag="OQQ26_001238"
     CDS             complement(5774..5953)
                     /locus_tag="OQQ26_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309858.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HCS1856752.1"
                     /translation="MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAG
                     KKGGQQSGGNKSGKS"
     gene            complement(6334..7140)
                     /gene="trpA"
                     /locus_tag="OQQ26_001239"
     CDS             complement(6334..7140)
                     /gene="trpA"
                     /locus_tag="OQQ26_001239"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HCS1856753.1"
                     /translation="MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAG
                     ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
                     ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD
                     DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
                     QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKAFVQPMKAATRS"
     gene            complement(7140..8333)
                     /gene="trpB"
                     /locus_tag="OQQ26_001240"
     CDS             complement(7140..8333)
                     /gene="trpB"
                     /locus_tag="OQQ26_001240"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HCS1856754.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
                     FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILE
                     REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
                     AFKTLCLHEGIIPALESSHALAHALKMMRETPEKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            complement(8345..9706)
                     /gene="trpCF"
                     /locus_tag="OQQ26_001241"
     CDS             complement(8345..9706)
                     /gene="trpCF"
                     /locus_tag="OQQ26_001241"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HCS1856755.1"
                     /translation="MMQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDAL
                     QGARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLP
                     IVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMG
                     VLTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGI
                     NTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAG
                     AIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQL
                     HSNEDQLYIDTLREALPAHVAIWKALSVGETLPTREFQHVDKYVLDNGQGGSGQRFDW
                     SLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASFFQTL
                     RAY"
     gene            complement(9707..11302)
                     /gene="trpD"
                     /locus_tag="OQQ26_001242"
     CDS             complement(9707..11302)
                     /gene="trpD"
                     /locus_tag="OQQ26_001242"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HCS1856756.1"
                     /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
                     ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLSQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
                     QTVLEVLRSGSAYDRVTALAARG"
     gene            complement(11302..12864)
                     /gene="trpE"
                     /locus_tag="OQQ26_001243"
     CDS             complement(11302..12864)
                     /gene="trpE"
                     /locus_tag="OQQ26_001243"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HCS1856757.1"
                     /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCEDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQLPNCRV
                     LRFPPVSALLDEDARLCSLSVFDAFRLLQNMLNVPKEEREAMFFGGLFSYDLVAGFED
                     LPQLSAENNCPDFCFYLAETLMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNDLRQQ
                     LTETAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
                     RADGSLDRDFDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQADAGVVLDSVPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     misc_feature    complement(12886..12979)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00513"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Trp leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00513"
     gene            complement(12956..13000)
                     /gene="trpL"
                     /locus_tag="OQQ26_001244"
     CDS             complement(12956..13000)
                     /gene="trpL"
                     /locus_tag="OQQ26_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HCS1856758.1"
                     /translation="MKAIFVLKAWWRTS"
     gene            13138..14019
                     /gene="yciV"
                     /locus_tag="OQQ26_001245"
     CDS             13138..14019
                     /gene="yciV"
                     /locus_tag="OQQ26_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HCS1856759.1"
                     /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD
                     HDTTVAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ
                     QTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
                     FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE
                     HHGDAMEVAQCQQSPNERTQLATLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE
                     GVWQLWEQPQNTTEREL"
     gene            14016..14636
                     /locus_tag="OQQ26_001246"
     CDS             14016..14636
                     /locus_tag="OQQ26_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HCS1856760.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI
                     EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL"
     gene            14664..16559
                     /locus_tag="OQQ26_001247"
     CDS             14664..16559
                     /locus_tag="OQQ26_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HCS1856761.1"
                     /translation="MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATL
                     QPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQSDGDAALLNYHIVGVTRDGIPEP
                     WHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNNWPF
                     EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVL
                     YRWPHALLSNAPAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVD
                     VIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQYDKNQQILICV
                     NEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSF
                     YRPDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFAR
                     DDDKPCVNRAIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVCLTGYLTGM
                     GYIFLPKFTQTGQQRYARGEAIVNSLARKEAATHSGRRRKGETRKLDYALLGWAISAN
                     LGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAG
                     GGGGGGW"
     gene            16770..17645
                     /gene="rluB"
                     /locus_tag="OQQ26_001248"
     CDS             16770..17645
                     /gene="rluB"
                     /locus_tag="OQQ26_001248"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HCS1856762.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV
                     TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV
                     QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QVSGGRRSGGRNNNG"
     gene            17815..18825
                     /locus_tag="OQQ26_001249"
                     /pseudo
     CDS             17815..18825
                     /locus_tag="OQQ26_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622024.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            18847..19155
                     /locus_tag="OQQ26_001250"
     CDS             18847..19155
                     /locus_tag="OQQ26_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001607262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856763.1"
                     /translation="MNDVQNRQILALLNMLYYALGNRTTCDICHKYFILVLSVMNNLT
                     INYGSQTSPELAVISYEDANDLITELILFIEDVNADNDMEYPAHLNKIQALLNFAVAN
                     "
     gene            complement(19212..19802)
                     /gene="cobO"
                     /locus_tag="OQQ26_001251"
                     /pseudo
     CDS             complement(19212..19802)
                     /gene="cobO"
                     /locus_tag="OQQ26_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415786.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
     gene            complement(19799..20557)
                     /locus_tag="OQQ26_001252"
     CDS             complement(19799..20557)
                     /locus_tag="OQQ26_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HCS1856764.1"
                     /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
                     NEEKLRQVASHINEETGRQPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGL
                     LGDVCPMSEQNPQVWQDVIQVNVNATFMLTQTLLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
                     DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
     gene            20777..21826
                     /gene="sohB"
                     /locus_tag="OQQ26_001253"
     CDS             20777..21826
                     /gene="sohB"
                     /locus_tag="OQQ26_001253"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HCS1856765.1"
                     /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
                     NNLSEQYKEMKEELAAALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
                     VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
                     LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKD
                     IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIDQVAT
                     GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
                     RLLLRWWQRGQKPLM"
     gene            complement(21862..22113)
                     /locus_tag="OQQ26_001254"
     CDS             complement(21862..22113)
                     /locus_tag="OQQ26_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HCS1856766.1"
                     /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
                     FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            22493..25090
                     /gene="topA"
                     /locus_tag="OQQ26_001255"
     CDS             22493..25090
                     /gene="topA"
                     /locus_tag="OQQ26_001255"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HCS1856767.1"
                     /translation="MGKALVIVESPAKAKTINKYLGSNYVVKSSVGHIRDLPTRGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
                     TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAKYDSTTLAVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
                     PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     PPKERCKTTINLVPENEVLNVPEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV
                     DGKWVEGKK"
     gene            25301..26275
                     /gene="cysB"
                     /locus_tag="OQQ26_001256"
     CDS             25301..26275
                     /gene="cysB"
                     /locus_tag="OQQ26_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HCS1856768.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM
                     LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
     gene            26570..26734
                     /locus_tag="OQQ26_001257"
     CDS             26570..26734
                     /locus_tag="OQQ26_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HCS1856769.1"
                     /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGFALFWVV
                     VALLIWKVWG"
     gene            26737..26899
                     /locus_tag="OQQ26_001258"
                     /pseudo
     CDS             26737..26899
                     /locus_tag="OQQ26_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_304581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            27013..27108
                     /locus_tag="OQQ26_001259"
     CDS             27013..27108
                     /locus_tag="OQQ26_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856770.1"
                     /translation="MINTNMKYWSWMGAFSLSMLFWAELLWIITH"
     gene            27272..29947
                     /gene="acnA"
                     /locus_tag="OQQ26_001260"
     CDS             27272..29947
                     /gene="acnA"
                     /locus_tag="OQQ26_001260"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HCS1856771.1"
                     /translation="MSSTLREVSKDALQAKDKTYHYYSLPLAAKSLGDITRLPKSLKV
                     LLENLLRWQDGNSVTEEDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAA
                     MREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFL
                     KWGKQAFSRFSVVPSGTGICHQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMI
                     NGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLR
                     KHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSE
                     DQVELVEKYAKAQGMWRNPGDEPIFTSTLELDMNDVEASLAGPKHPQDRVALPDVPKA
                     FAASNELEVNAMHKDRQPVDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLL
                     AKKAVTLGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNS
                     GPLPDPIETAIKKGDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNI
                     NLAAEPIGHDRKGDPVYLKDIWPSAQEIARAVEQVSTEMFRKEYAEVFEGTAEWKEIN
                     VTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIHGARILAMLGDSVTTDHISPAGS
                     IKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTR
                     HLPDSDIVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESF
                     ERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDIGDLQNLQPGATVPVTLTRADG
                     SQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK"
     gene            complement(30011..30601)
                     /gene="ribA"
                     /locus_tag="OQQ26_001261"
     CDS             complement(30011..30601)
                     /gene="ribA"
                     /locus_tag="OQQ26_001261"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HCS1856772.1"
                     /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
     gene            30771..31535
                     /gene="pgpB"
                     /locus_tag="OQQ26_001262"
     CDS             30771..31535
                     /gene="pgpB"
                     /locus_tag="OQQ26_001262"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HCS1856773.1"
                     /translation="MRSIARHTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
                     TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
                     PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
                     SGHTMFVASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLI
                     SWALVAVATWLTQRICGPLTPPAEENREIAQREQES"
     gene            31684..31992
                     /gene="lapA"
                     /locus_tag="OQQ26_001263"
     CDS             31684..31992
                     /gene="lapA"
                     /locus_tag="OQQ26_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA"
                     /protein_id="HCS1856774.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAAGFAIGWLICGLFWLRVRVSQVRAERKIKRLENQLSPATDVAVAPHSSAAKE
                     "
     gene            31999..33168
                     /gene="lapB"
                     /locus_tag="OQQ26_001264"
     CDS             31999..33168
                     /gene="lapB"
                     /locus_tag="OQQ26_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HCS1856775.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
                     IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSI
                     MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
                     EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
     gene            33362..34099
                     /gene="pyrF"
                     /locus_tag="OQQ26_001265"
     CDS             33362..34099
                     /gene="pyrF"
                     /locus_tag="OQQ26_001265"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HCS1856776.1"
                     /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLK
                     VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTVAHAVAAAADLGVWMVNVHASG
                     GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQK
                     CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEEALAAGVDYM
                     VIGRPVTQSVDPAQTLKAINASLQRSA"
     gene            34099..34425
                     /gene="yciH"
                     /locus_tag="OQQ26_001266"
     CDS             34099..34425
                     /gene="yciH"
                     /locus_tag="OQQ26_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415798.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HCS1856777.1"
                     /translation="MSDSNSRLVYSTETGRTDEPKAAPVRPKGDGVVRIQRQTSGRKG
                     KGVCLITGIDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK
                     VKLAGG"
     gene            complement(34551..34769)
                     /gene="osmB"
                     /locus_tag="OQQ26_001267"
     CDS             complement(34551..34769)
                     /gene="osmB"
                     /locus_tag="OQQ26_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HCS1856778.1"
                     /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
     gene            complement(35038..35787)
                     /locus_tag="OQQ26_001268"
     CDS             complement(35038..35787)
                     /locus_tag="OQQ26_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1856779.1"
                     /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
                     SYLRRAHGFAVSLDSDDVETRMMSNYMLKRELAEFAASLVQPGETIFIENGSSNALLA
                     RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
                     SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVE
                     RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
     gene            complement(35877..36050)
                     /locus_tag="OQQ26_001269"
     CDS             complement(35877..36050)
                     /locus_tag="OQQ26_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856780.1"
                     /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA
                     ESTPDIPKAPWEI"
     gene            complement(36198..36853)
                     /locus_tag="OQQ26_001270"
                     /pseudo
     CDS             complement(36198..36853)
                     /locus_tag="OQQ26_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000859919.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
BASE COUNT         9392 a         8717 c         9359 g         9385 t
ORIGIN      
        1 cacactgaca ccggaataat cccttgaaga tgttaatcgt taatgggtta tcacttgcag
       61 gtgtacggcc tttacgattt ttatcgagga tttcttgagc tttattgaac gttgaagcat
      121 ctatagcggc ttcgtagtag ttcggtatag cggggcggtc attgcgttgt gatgctggta
      181 acgtgcctat tgttgtctcc gaccttaaga tggtgcgtac agagtgaaca ctaaacccat
      241 tagcatcttt acggcggcta aaaggcctta taccgttgct ttgaaggtga cgtgcaatgt
      301 tatgtagact ttcaccatct agcagcagtt tgaatatcaa tctcacagtc tcagcgtgtt
      361 cattgagttt aaaagtctca gggtcaatcc atccgggaac catctttgta agacgttgtt
      421 caccagcaag ggcaagtttt gcacgttgct cccatttctg agaaacacgg aaagacttct
      481 gcttagattc ctgatgcgct atgtaggctt tgacacgctg gatgatgctt atgccaaggt
      541 catcggctaa agcatccttt gtgtagataa ggccatcttg caatgtgtga atctctatcc
      601 cgttgcctaa gatgcggttc atcaaggctt ctgtttcaag atgctctaat cggcctatac
      661 ggtcgatact ctcaactagc agaattgtac cttctggaaa ctccccagcc tcaatacggg
      721 ctaacatgtc accaaactga ccagtaaggt gtttaccttt gtaaccactc aacccttcat
      781 cactgaaaga cgctactatt tgagcatcgc cattcttctt cagccttgag caggtcgttt
      841 tgtcgtctgg ttgaatctgc accttcaacg ccttgtatgg ctgaactgta ccgaaggtat
      901 gtaattacgc ttctcatggt gataaactcc catgcaattg attctcattt aaagataagc
      961 ttataaccgt tatggctaat gctacaatgc cgaatagcta caatacaatg acccttgatt
     1021 tacctcgccg cttcccctgg ccgacgttac tttcggtctg cattcatggt gctgttgtgg
     1081 cgggtctgct ctatacctcg gtacatcagg ttattgaact acctgcgcct gcgcagccga
     1141 tttctgtcac gatggttgcg cctgctgatc tcgaaccgcc acaagccgtt cagccgccac
     1201 cggagccggt ggtagagcca gaaccggaac ctgagccgat ccccgaaccg ccaaaagaag
     1261 caccggtggt cattgaaaag ccgaagccga aacctaagcc aaaaccgaag ccggtgaaaa
     1321 aggtacagga gcagccaaaa cgcgatgtca cacccgtaga gtcgcgtccg gcatcaccgt
     1381 ttgaaaatac ggcaccggca cgcccgacat caagtacagc aacggctgca accagcaagc
     1441 cggttaccag tgtggcttca ggaccacgcg cattaagccg taatcagccg cagtatccgg
     1501 cacgagcaca ggcattgcgc attgaagggc aggttaaagt taaatttgac gtcacgccgg
     1561 atggtcgcgt ggataacgta cagatcctct cagccaagcc tgcgaacatg tttgagcgtg
     1621 aggtgaaaaa tgcgatgcgc agatggcgtt atgagccggg taagccaggc agtgggattg
     1681 tggtgaatat cctgtttaaa attaacggca ccaccgaaat tcagtaagca gaaagtcaaa
     1741 agcctccgac cggaggcttt tgactattac tcaacaggta aggcgcgagg ttttccttca
     1801 ggatcaaccg cgacatactt aaataatgct tctgtcgctt tatagcgttg cccgattggt
     1861 tcagacgcta cttttttcac ccacacttca atattaatgc tgatcgatgt cgtccctttc
     1921 tggacacagc gtgcatagca gcacaccaca tcgccgaccg caaccggccg taagaaagtc
     1981 attccttcaa cccgcacagt cactacgcga ccgtgggcaa tttcttttgc tagaatagcg
     2041 ccgccaatat ccatttgtga cattaaccaa ccaccaaaga tgtcaccatt ggcattggta
     2101 tcggcgggca tggctaaagt acgtaaaaca agatcgccct gagggacgtt atgtgttgta
     2161 gacatggtaa aaccgactta aaaggaaaat cacaggcgcg atgctactat gattttcctg
     2221 aggagaacag aggagataca gcgccagccc cgaaggactg gcagtctggt taggatttat
     2281 cttcctgcgg catgtggcgg tagatataga taccgcttaa caatgtgaag attaaggtaa
     2341 gggcggtcag gccaaagact ttaaagttga cccaaatatt ttgcggcagc cagaatgcga
     2401 tgtagatgtt tgccagaccg caaaggataa agaaaacagc ccaagccaga ttcagcttcg
     2461 accataccgg ttgcggcagc gtgagttctt tacccagcat ccgctgaatt agcggctttt
     2521 tcatcaccca ttggctgact aacagggctc ccgcaaacag agcataaatg actgtaacct
     2581 tccatttaat aaactcatca ttgtggaaga acagcgtcaa gccaccgaag acgaccacca
     2641 gaacaaaagt gatcagggcc atcttctcaa ccttacgaaa gcgaacccag ctatagataa
     2701 gcacaatcgc cgtggcgacg atcagcgccg cagtagccgc atagatgtca taaatcttgt
     2761 aaaacgcgaa aaagacaacc agcggtaaaa aatcaagaaa ctgcttcatt ttacgattcc
     2821 gtaatcaaat gcttaaggtt attggcgaat caacatatac aggcggaaca gatagatgag
     2881 caatatggct gaaatcaggt tgctcaaggt gttcgccagt acggcaccaa tttccggggt
     2941 taatgcggca aaagaagagg caaaaagcag caacagtgtt tttgccagca accagctcag
     3001 tactgcgggt gccaccagac gcatattcgc ccaagtcagc cgcatactgc tacgcatcga
     3061 ggcaaaaatg cccattttgt cctgtaccag catcaccggt gccagggcca gtaaaatggc
     3121 catgataatt cccggaacga ccactagcat gatgccaatc tgtactaaaa gggtagtcag
     3181 aaaaatcaga ataaataact ttggcaatat cggcgcactg gcaccaatag ctcgcagcgc
     3241 actgactctc tgacccgcag acaccagctg gataattaat attacgcctc cggcgagaat
     3301 ggcgttaccg attaatcctg aaaaagtgga cgccgctgaa gcctgcagca aaatttgttg
     3361 ctgttccggt gacatattct gaaccaggtc gaacaaccca ctactgccgc taacgggcac
     3421 gccgtcattg agctgcgcaa gctgtgcatc actgggtgag aaaacatgcc ctaacaccac
     3481 tgtgataaac gcacatagca acgataccaa cagaatggtc ataaattgat tacggaagaa
     3541 atttccggtg tcacggtata cggactgcgc cgtgatagac atgcactctc cttgagtttt
     3601 atgcaggtgt taattagcgg gcaattgtac cctggttaag cctcgggtgg cagcatcagg
     3661 tcttgtatgg aaaagcatat ctttgtaaag cggaggtaat tgctggcctt caggcgtggg
     3721 caaaccgcgg caatggcgat cgagttaata tttgcgtagc gaaaatattt aaaaattgat
     3781 ttaaatcacg ttaaccagga ttctcaatgc aacttctaaa ttaatccaga tcaataaagg
     3841 gtgaattatc atatgtaatg tgatctatgt aggatcattt gttactccaa tgtaggtata
     3901 ttcgtcacgt ttttataacc ataacgacgg agcggatatg aaaaagttaa cagtggcggc
     3961 tttggcagta acaactcttc tttctggcag tgcctttgcg catgaagcag gcgaattttt
     4021 tatgcgtgca ggttctgcaa ccgtacgtcc aacagaaggt gctggtggta cattaggaag
     4081 tctgggtgga ttcagcgtga ccaataacac tcaactgggc ctgacgttta cttatatggc
     4141 gaccgacaac attggtgtgg aattactggc agcgacgccg ttccgccata aaatcggcac
     4201 ccgggcgacc ggcgatattg caaccgttca tcatctgccg ccaacactga tggcgcagtg
     4261 gtattttggt gatgccagca gcaaattccg tccttacgtt ggggcaggta ttaactacac
     4321 caccttcttt gataatggat ttaacgatca tggcaaagag gcagggcttt ccgatctcag
     4381 tctgaaagat tcctggggag ctgccgggca ggtgggggtt gattatctga ttaaccgtga
     4441 ctggttggtt aacatgtcag tctggtacat ggatatcgat accaccgcca attataagct
     4501 gggcggtgca cagcaacacg atagcgtacg cctcgatccg tgggtgttta tgttctcagc
     4561 aggatatcgt ttttaattcc acaaaaaaac gaccccgtaa tatacggggt caataaggac
     4621 atggcattaa gggtattatt tcttcgcttc tacgtcgtca gtttcagagc gaattaaaaa
     4681 tttctcagtt gtttgcggaa tatgctgaat cagccagtcg gccatttgct tttcctcatt
     4741 taaaatcgct tcgatggttg gaattgaagc tgtatcaccg gcattttttg ctgctgctaa
     4801 tagtgaggtg taacaggcga tttcaaattg ctcgaagaca tatccgctaa tagatccttt
     4861 gactatttca tcagaaggga atataccacc gattgactgc ccaagcgcag ccattttact
     4921 catggaatct ttaatgactg aacgtgaaat gtcattacga tcaagaatag tttccagttg
     4981 aacaatctgg tttttggttt cactaagatg ttgttcaata cgagcgcgta gttcaggata
     5041 attatctata cggctggcca tggattcaag catagattcg gcttgctttt ccattgcgtg
     5101 ggcgtcacgt aaccagtcat gataatgttc aatacgattc atgaaaatgt cctctttata
     5161 aaatgactaa aagttaaagt tcatatttca ggctttattt tcggctttct tatttacgtt
     5221 attaagggcc agatcagtca gtttgatgtc ggtagccttt tcttcttcca gggtctcttt
     5281 cagaagcttc gctgctttac ggtaacctaa ttgttcagcc agcgtcgcta atgtcccgta
     5341 actggcaatc tcataatgct cgactttctg tgctgcggca atcagtgcgg catcacgcac
     5401 ttcgtttttc tcggtacttt cgatgacctc attagcttct tcaataagac cttccattgc
     5461 cacacatttc atgcgcttaa ttttcaggtt cgattcggac tccacaactt gatcaatacg
     5521 ttcaatctgt ccatgtgttt cctcgaggtg cgcatgaaaa gcctgactta atttttcgtt
     5581 tgatgttgct cttgcgagtt ttgccagtgc ccgggttaat tgtttttctg cgctgtaggt
     5641 atctgaaagc aggtgaataa atacatcttc aatggtcttc atattcatat ttttctccag
     5701 tggaatcact gcgagccata cggcccgcag atgcaattat ctttatcagc tgatattaat
     5761 aattaacggt gaatcaggat ttacctgatt tattaccacc gctttgttga ccgccttttt
     5821 tacccgcttc agatgcgcgt tgcggatcat ttttaaaatt accgccgcta tgctgaccgc
     5881 ctttacggcc tgcgtcggat gccttctcac ggtcttcggc gaaatttcct gaaccaccac
     5941 gatgttcggc catgttattt ctcccgttgc gttgcattgt ttcattaata tgagtgttgt
     6001 gtgtcgacac tcattaaaat tagtcgctaa tgagaattag tcaaattaag cgtaacgaga
     6061 agaaagtggg aaaatatatt atgaggaacg ttcttgatat attaataatt gcctgaggaa
     6121 taagtgactt agagaaaatt attgatttta ctggtgttat gttgcgggat taatttgttt
     6181 gattatatta ctgttgggcg gaaaaatgac gtaagttgac gtttgacagg ggtaagcgaa
     6241 acggtaaaaa gataaatatt aaatgaattt aggatttttc cggcttcgtt aaagaaagtt
     6301 aaaatgccgc cagcggaact ggcggctgtg ggattaactg cgcgtcgccg ctttcatcgg
     6361 ttgtacaaaa gctttcagtg ccgccagcat tttctctggc tcattaatat gttgctcgat
     6421 gattttaaca atggccgaac cagaaatcgc gcccgcagct cctgcatcaa tcgctgcttt
     6481 tacctgatcc ggggcggaaa taccaaatcc ctgcaatgga ggtgcagcgt tgtactcttt
     6541 cagcttcgca accagatgat tgaggggtaa cgcggcgcgg ttttctgcgc cggtcacgcc
     6601 cgctcgtgac agcaaatatg tgtaaccacg accgtaagag gctatctggc gcagcaggtc
     6661 gtcatcggca tttggcgggc agatgaagat aggtgcgaca ttatgacgca acgcggcctg
     6721 gcggaagggc gcggactctt caactggcac atcggcaacc agcaccgaat cgacgccgac
     6781 tttctcgcac tgggcataaa actcatcaat gcctttgtta aacaccagat tggcatacat
     6841 caacaggcca atgggaatgg tcgggtgttt ctggcgaatc agtgccagca tttcaaaaca
     6901 ttgtgccgga gtcacacctg ccgcaaaggc gcgcagagtg gcgttttgaa tggtcgggcc
     6961 atccgccagt gggtcggaga aggggatacc taactccagc gcgtcagcac cggcttcaat
     7021 tagcgtatcg ataattttca atgactgctc aatgcccgga tccccgagcg tgacgaaagg
     7081 aacgaatgcg ccttctttgc gctccttcaa ctgggcaaac agagattcgt aacgttccat
     7141 cagatttccc ctcgtgcttt caaaatatcg tgaacggtga agatgtcttt atcgccgcga
     7201 ccggaaaggt taaccaccag tagctgctct ttttccgggg tttcgcgcat cattttcaac
     7261 gcatgggcca gggcgtggga ggattccagc gccgggatga tcccttcgtg caggcacagc
     7321 gttttgaagg cttcaagggc ttcatcatcg gtaatagaca cgtaatcagc gcgtccagtg
     7381 ctgttaagat acgcgtgttg tgggccgaca gacgggaaat ccagtccggc ggagatggag
     7441 taagattctt caatctgccc gtcttcggtt tgcatcatcg gcgctttcat accgaaataa
     7501 atgcccacgc gaccatgttt tagcggtgcg ccgtgctcgc cagtttcgat accgtgacca
     7561 cctggctcca caccaatcag gccgacgttg gtttcattga tgaaatcagc aaacatgccg
     7621 atggcattcg aaccgccgcc aacacaggcg ataacggcat ccggcaggcg accttctctt
     7681 tccagaatct gcgctttggt ttcttcgcca atcatccgct gaaactcacg cacaatggtc
     7741 gggtaaggat gcgggccagc cgcggtgccc agcatatagt gcgcggtttc ataactgccg
     7801 gaccagtcgc gtagcgcctc attacaggca tctttcagcg tggcggaacc gctatgtacc
     7861 gggatcactt ccgcacccat taagcgcata cgaaaaacgt taggtgactg gcgttcaacg
     7921 tctttggcac ccatataaat acggcatttc aggccgagca gggcgctggc aagggccgac
     7981 gccacgccat gctgaccggc accggtttcg gcgatgattt cggttttacc catccgcttc
     8041 gccagtaaag cctgaccgag cacctggtta gttttatgcg cgccgccgtg cagcaaatct
     8101 tcacgcttga gatacagcgt ggtgttcgtc ccggctgtaa tgttctggca tttggtcagc
     8161 gcggttggac gcccggcata gtttttcagc aggtcgttga actgagcctg aaattcagga
     8221 tctttttgcg cactgacaaa agcttcttcc agctggcgca gagcaggcat caggatttgt
     8281 ggcacgtaca tgccgccaaa ctcaccaaaa taggggttaa gtaatgttgt cattgttcct
     8341 ttccttaata tgcgcgcagc gtctggaaaa acgaggccaa aagacgtgcg tctttgatgc
     8401 ccggttgcga ctctacagca gaattaaaat caagtccggc gcagccggtt tgtgccgctt
     8461 ccacgcagtt atctgcgcct aagccccccg ccagcagaac gttgccaagc gattgaccat
     8521 ttaatagtga ccagtcaaaa cgttgcccgc ttccaccctg gccgttgtct aaaacatatt
     8581 tatcaacgtg ctgaaactcg cgggtgggca gggtttcacc gacgcttaat gctttccaga
     8641 tggcaacatg tgctggcaga gcttcacgca gcgtatcgat atacagctga tcttcattac
     8701 tatgcagttg cactgccgcc agcgataaca ccttagcttt gtccaccaca tcggcaatat
     8761 cgtgattgcg gaacacgcca acatactgca acggtgccgc agccatcact tcctgcgcct
     8821 gttcaacgtt gacgcaacgc ggtgatgtcg caacaaaaat caacccaccg taaatcgcgc
     8881 ccgcgtcata agctgcttta gcatcttgcc cacgcgtcag gccacatact ttattctcac
     8941 ccagcaacac ccggcgcacg gcggcgtgca aatcgtcatg ggccatcaac gccgaaccaa
     9001 tcagaaaacc gttagcgaag tggcttaact cgcgcacctg agcgtaagta ttgatgccgg
     9061 attcgctgat taccgttacg ttgtgcccca gtttcggcgc aagctcgcgg gtacggttga
     9121 gatcaatcga caaatcacgc agatcgcggt tgttgatgcc aacgaccttt gcccctaatg
     9181 caatggcgcg ctccagttcc tcttcattac tgacttcggt cagcaccccc atctccagac
     9241 tgtgagcgac ggctgcaagc tggcgatatt ggtcgtcatc cagtactgaa agcattaata
     9301 agcaggcatc ggcctggtaa tagcgcgcca gatagatctg gtaagggtcg ataatgaagt
     9361 ctttacataa aatcggctgc ggggcgattt ggctgacgat ggggaggaaa tcaaagctcc
     9421 cctgaaaata tttctcatca gtcagcaccg aaattgccga agcgtaatgt ttataaatgg
     9481 cggcaatgcg tgccggatcg aaatcatcac ggatcacgcc ttttgacggc gacgctttct
     9541 tgcactccag aataaacgcc gtgcgtgcac cctgtagcgc atcataaaaa tgtcgcgtgc
     9601 tcggctgaac ctcattctga aaactggcca gcggttgctg ctgtttgcgg gtttctaccc
     9661 aaatcgcctt gtctgcgacg attttcgcta aaacggtttg catcatttac cctcgtgccg
     9721 ccagtgcggt aactctgtcg taagcggaac cactgcgcag tacctcaaga acggtttgcg
     9781 cattggcttg cagatcttca tggccatgca ggcgcattaa catggcgacg ttcgcagcga
     9841 cggctgcttc atgggcggcg tcgcctttac cttgtaacaa gcgtgttaaa atgtcacggt
     9901 tttcttccgg tgttccgcct gccagttgct cctggtggta gggtgtcagg ccaaaatctt
     9961 cagcggtcaa ttgatagctc ttaatttcgc cgtcatgcag ctcggcaacg attgtcggcg
    10021 cgtgtaatga aacttcatcc atcccgccgc tgtgcaccac cgccgcgcgt tgatacccca
    10081 gcacgcgcaa ggtttcggca atcggcagca ccagttccgg actataaaca ccaattaacg
    10141 ccagcggcgg atgagccggg ttaatcaatg gccccagcac attgaacagg gtgcgggttt
    10201 tcagttgctg gcgaaccggc atcgcgtggc ggaatccggt gtgatatttc ggcgcaaaga
    10261 ggaaacatac gcctaactca tccagcgcct ggcgcgattt atcggcgttc atatcaagat
    10321 taataccgaa tgccgccagc agatccgacg agccggattt actggagacg ctacggttgc
    10381 cgtgtttcgc cactttcagc ccacaggccg cggcgacaaa cgcactggcg gtagaaatat
    10441 tgatactgtt gctgccgtca ccgccagtac cgacgatatc agcaaacaga taatccgggc
    10501 gcgggaacgg cgctgcgttt tccagtagcg cggttgctgc cccggcgatc tcgttcgggt
    10561 gctcgccgcg aattttcatg ctcaccagcg ccgccgccag ttgttccggc ttcagctcgc
    10621 cacgcaccac cgctgaaaac agctggtggc tttcttgttg gctaagcgtc tgtgcctgat
    10681 acagtttttc cagaatcggt tgcagcgtgt tggttggctc tagtttctgc tgcgcccagg
    10741 ccagcgtttg ttccagcagg cgagctccct gggtagtaag aatggattcc ggatggaact
    10801 ggaatccaca aacgcgatcc gcatcgtgac gtactgccat caccatgcca ttaaaatggg
    10861 cgttgatggt taaaccggcc ggaatgttac tgccaaccag cgagtgataa cgcgccaccg
    10921 gcagcgggtt tgttaatccg gcaaacatcg cctgaccgtc atgttcaatg ctcgacgctt
    10981 taccgtgaag aatttcgccc gcctgaccga catagccccc gtaagcttcg acaattgcct
    11041 gatgtccgag gcaaatgcca ataatgggca gcttgccacg caagcgggtg aggagttccg
    11101 gcatacaacc ggcttcgctc ggcacaccgg ggccaggaga aagcatcagt accggattgc
    11161 tcatcgtcgc caggcgttca attaaggtct gcgccggaat atggttgcgg taaatcacca
    11221 cgttatgccc attgctgcgc aactgatctg ccaggttgta agtaaaagag tcgatattat
    11281 cgagcagcag tatgtcagcc atcagaaagt ctcctgtgca tgatgcgcgg tggcaatagc
    11341 gcgcagtaca gcgcgggctt tattacgggt ttcgtcggct tccgactgcg gaacagaatc
    11401 aaggactacg ccagcatcgg cttgcacggt ggcgataccg ttttccacca gtgccgagcg
    11461 gatcacaatg caggtgtcga gatcgccatg cgcggtgaaa taacctaccg cgccgccgta
    11521 gctgccgcgg cgacgacctt ccgcctcggc aattaactgc atagcgcgta ctttcggcgc
    11581 accacttaac gttcccatat tcatacaggc gcggtaagcg tgtagggcgt cgagatcgtg
    11641 gcgcagctca ccgaccacgc gggagaccag gtgcatcacg taagagtaac ggtcaacttt
    11701 ggtgaggtcg gcgacgtagc ggctgccggg ggtgcaaatg cgtgccagat cattacgggc
    11761 aagatccacc agcatcagat gttcagaaag ctctttatga tcggtacgca tctccagttc
    11821 gatgcggctg tcgaagtctc tgtccagcga accatcggca cgacgaccgc gtgggcgtgt
    11881 cccggcaatc gggtagatct caatctggcg gctggtggcg tcatatttga gcgaactttc
    11941 cggcgacgca ccaaacaggg tgaaatcatt atcctgcata aaaaacatgt acgggctggg
    12001 attactcttt ttcagcacgt aataggccgc cagcggtgac gggcagggca gagagaaacg
    12061 gcgagatggc accacctgga aaatttctcc ggcgcgaatc gctttttgca acaaacgcac
    12121 tacgccaccg aactcttcat cgctctggtt acattcacaa cgcatatgcg gcacggaaac
    12181 caccggcagc ggtggcgcgg tttcggtcag ttgctggcga agatcgttca ggcgagcagt
    12241 gagacgttgt ttttcttctt cattcggagc aaacaggctg gcctgaatgc gggtgctttt
    12301 tttctgatgg tcaatcacca tcagcgtttc agcgagataa aaacagaaat cagggcagtt
    12361 attttccgct gacaattgcg gtaaatcttc aaaccccgcc acaaggtcat aagagaacag
    12421 gccgccgaag aacatggctt ctcgttcttc cttcggtaca ttcagcatat tctgcaataa
    12481 gcggaaagcg tcaaaaaccg aaagggagca taagcgagcg tcttcatcca gcagtgcact
    12541 gacagggggg aagcgcagca cacggcagtt tggtaattgt tcattttcta cacctgcagg
    12601 cagggcgtta tccagtagtg tcagcagggc ttcgccgttg ccggaaagtg cctggattgt
    12661 gacagtgtca cctaaagctg taatgcgcag cgcactgtct accagcagca ggctttttaa
    12721 atcatctttg ctgtcgatat ctgcggattc cagcagcagc gttgctggac gatcctcaca
    12781 caactggtga aaaagcgcgg tgggattgtc gcgataagcg ccttcgcagg ttagcagttc
    12841 gagagtcggt ttttgtgttt gcattgttat tctctaattt tgttcaaaaa aaagcccgct
    12901 cattaggcgg gctgggtatc tgattgcttt acgcatggtg aatacactgc ccgtttcagg
    12961 aagtgcgcca ccaagctttc agtacgaaaa ttgctttcat tgtcgatacc ctttttacgt
    13021 gaactttcgt gctagttaac tagtacgatg attaattgtc aacagctcat ttcagaatat
    13081 ttgccagaac cgttatgatg tcggcgcaaa aaacattatc cagaacggga gtgcgccttg
    13141 agcgacacga attacgcagt gatttacgac ctgcacagcc ataccacagc ttccgatggc
    13201 tgcctgacgc cagaagcatt ggtgcaccgt gcagtcgaga tgcgcgtcgg caccctggcg
    13261 atcaccgacc atgacaccac agttgcaatc gcgccagcaa gagaggaaat ttcacgttcg
    13321 ggactggcgc tgaatcttat tcccggcgtg gaaatttcca cggtctggga aaatcatgaa
    13381 attcatattg tcgggctgaa tattgatatt actcatccgc taatgtgtga gttcctcgcg
    13441 cagcagacag aacggcgcaa tcagcgggcg cagcaaattg ccgaaagact tgaaaaagcg
    13501 caaatacctg gggcgctgga aggcgcacaa cgactggcgc agggcggcgc agtgacgcgc
    13561 ggtcattttg cgcgtttcct tgttgagtgc ggcaaagcca gttcaatggc ggatgtcttt
    13621 aaaaagtatc tggcgcgcgg gaaaaccgga tacgttccgc cacagtggtg tacaatagaa
    13681 caagctattg atgtcattca tcattctggc ggtaaggcgg tgctagctca tcctgggcgg
    13741 tacaatctta gtgctaaatg gctgaaaaga ttggttgcgc attttgccga acaccacggc
    13801 gacgcgatgg aagtcgcgca gtgccagcaa tcgcccaatg aacgcaccca gctggcgaca
    13861 cttgcgcgtc agcatcattt atgggcatca caaggatctg attttcatca gccatgcccg
    13921 tggatcgaac tgggtcgtaa actctggctg cccgcaggcg ttgaaggcgt ctggcagcta
    13981 tgggaacagc cgcagaacac cacagagagg gaattatgag ccagtttttt tatattcatc
    14041 ctgataaccc acagcaacgt ctgatcaacc aggcggtgga gatcgtgcgt aaaggcgggg
    14101 tgattgttta tccaactgat tccggctatg cgctcggctg taaaattgaa gataaaaacg
    14161 ccatggagcg tatttgtcgt attcgccaac tgccggacgg tcacaacttt accctgatgt
    14221 gtcgcgatct ttctgaactc tcgacctatt catttgtcga taacgttgcg tttcgtttaa
    14281 tgaaaaacaa cacgccgggc aactatacct tcatcctgaa ggggacgaag gaagtgccac
    14341 gccgtctgtt gcaggaaaaa cgcaaaacca tcggtatgcg tgtgccttct aacccgattg
    14401 cgcaggcgtt gcttgaagca ctgggcgaac cgatgctttc cacttcgcta atgctgccag
    14461 gcagcgaatt taccgaatcc gatcccgaag aaattaaaga ccgtctggaa aaacaggtag
    14521 atttgattat tcacggcggc tatctcgggc agaaaccgac aacggttatt gatcttaccg
    14581 atgatacgcc ggtcgtggtg cgtgaaggcg taggcgatgt gaagcctttc ttataacaaa
    14641 ttgcgttcca cggatggaag actatggcag ggaagtttcg ctgcattttg ctgttgatag
    14701 cagggctgtt tgtatcatct ctaagttatg cagaaaacac ggagatccct tcttatgaag
    14761 aagggatctc gctctttgat gttgaagcca ctctgcaacc ggatggggtg ctcgacataa
    14821 aagaaaatat tcattttcag gcgcgaaatc agcagattaa gcacggattt tatcgtgatt
    14881 taccacgact ctggatgcag tctgatgggg acgctgcact gctgaactat catattgttg
    14941 gcgtcacccg tgatggtatt cctgaaccct ggcatcttga ctggcatatc gggttaatga
    15001 gtattgtcgt gggcgataaa caacgtttct tgcctcaagg cgactatcat tatcaaattc
    15061 attatcaggt taaaaatgct ttcctgcgtg agggagattc agatctgtta atctggaacg
    15121 tgactggtaa caactggccg tttgaaatct ataagacccg attttcactc aagtttcctg
    15181 atatcgcggg taatccattt agcgaaatcg atctctttac tggagaagag ggcgacacat
    15241 atcgaaatgg ccgcatcctt gaggacggaa gaattgaatc ccgcgatccg ttttatcgtg
    15301 aagatttcac ggtactctac cgctggcctc acgctttact tagcaatgcc ccggcaccac
    15361 aaacgacgaa tattttcagc catcttcttt taccctccac gtcatcgttg ttaatttggt
    15421 ttccgtgtct gttcctggtt tgtggatggt tatatctctg gaagcgcagg ccgcaattta
    15481 cgccggtaga tgtgattgaa accgatgtca ttccgccaga ttacacgccc ggcatgttac
    15541 gtctcgatgc gaagctggtt tacgacgata aaggtttctg tgccgatatc gtaaatctga
    15601 ttgtgaaagg aaaaattcat ctggaagatc agtatgataa gaaccagcaa atcctgattt
    15661 gtgttaatga aggtgcgacc agaaataatg aggtattact gcccgcagag cagttattac
    15721 tggaagcgtt atttcgtaaa ggcgataagg tcgttcttac ggggagacgc aacagagtct
    15781 tacgcagggc atttttacgg atgcagaaat tttatctgcc gcgtaaaaag tcttcgtttt
    15841 accggcctga tacttttttg caatggggtg gactggcaat attggcggtc attctctacg
    15901 gtaacctgag tcccgtaggt tgggcaggaa tgagtctggt aggcgatatg tttattatga
    15961 tctgctggat tattcctttt ttattttgtt cccttgagct tttgtttgcc cgcgatgatg
    16021 acaagccttg cgttaatcgt gcaatcatca ctttgttttt accactgatt tgttcaggcg
    16081 tggccttcta ttctctctat atcaatgtcg gagatgtatt cttttactgg tatatgccag
    16141 cgggttattt tagcgctgtt tgcctgaccg gttatctcac tggcatgggg tatatttttc
    16201 tgccaaagtt tacccaaact gggcagcaac gttatgcccg cggtgaagct atcgttaact
    16261 ctcttgcgcg taaagaggca gcaacacaca gtggacgtcg gcggaaaggg gaaacacgga
    16321 aactggatta cgcgttgcta ggttgggcta tatcggcaaa tttggggagg gaatgggcgt
    16381 tacgcattgc cccttcgctt tcttcggcga ttcgcgctcc agagattgcc cgtaacggcg
    16441 ttttattctc attacagacg cacctaagtt gcggggccaa taccagtttg ttggggcgaa
    16501 gttattccgg tggtggtgct ggcggcggcg cgggtggcgg aggcggtggt ggctggtaat
    16561 taagctgatg ttaatcgaaa caagctttaa ccataaagat agtgtagtat gttgcgcctc
    16621 aaagccaggc cgataaacgt cgagtcgttt acttaaggcc tgaagagttc aaacagactt
    16681 tactatcagt gagtcagatg taagttctga ctcactgttg cacaaaagca tatcagacgc
    16741 ctgggaaggc gacaccaaaa ggaagctcta tgagcgaaaa gctacagaaa gtgctggcgc
    16801 gtgccggcca cggttctcgc cgtgaaatcg aatctattat tgaagccggt cgtgtgagtg
    16861 ttgatggcaa aattgctaaa ctcggcgatc gcgttgaagt tacccctgga ttgaaaatcc
    16921 gtatcgatgg tcacctgatt tcggtacgtg agtccgctga acaaatttgt cgcgttctgg
    16981 cctattacaa accggaaggt gagttgtgta cccgtaacga tccggaagga cgtccaacgg
    17041 tgtttgaccg tctgccaaaa ctgcgtggcg cacgctggat tgccgtgggt cgcttggacg
    17101 ttaatacctg tggtctgctg ctgttcacca ccgatggtga actggcaaac cgtttaatgc
    17161 acccaagccg tgaagttgaa cgtgaatatg ccgtgcgtgt atttggtcag gttgacgacg
    17221 cgaaactgcg tgatttgagt cgtggcgtgc agttggaaga tggtccggca gcttttaaaa
    17281 ccatcaagtt cagcggcggc gaagggatca accagtggta caacgtgact ctgaccgaag
    17341 gccgtaaccg tgaagttcgt cgtctttggg aagcggttgg tgtacaggtt agccgcctga
    17401 tccgtgttcg ttacggtgat attccactgc cgaaaggtct gccgcgcggt ggctggacgg
    17461 agctggacct cgcccagact aactatctgc gcgaactggt ggagcttccg ccagaaacca
    17521 gctctaaagt cgctgtagaa aaagaccgtc gtcgcatgaa ggctaatcag attcgtcgtg
    17581 cggtgaaacg tcacagtcag gtgagcggcg gtcgtcgttc tggcggacgt aataataacg
    17641 gttaatttaa gttaagtata aaataaaggc cctgcggggc cttttcttca tttgaagtat
    17701 gataaatagt cgcagtattt taatttaatt tcatacttgc ttatgaataa taccaggaaa
    17761 tagccacatt actatttaat tatctaagat aaactcaacg tcaagaggtg ggttatgatt
    17821 agatatagtg gaatatttct atcgctgtta atgctttcag gttgtgcaac cgaagcattg
    17881 aagaatgaac aagctgaaac tgttattact gcgggtaaca aggcggttgc ggcgaatgca
    17941 agtttcttta aacaatacta tgcttctcgt gaaaacttcc ttgttaattt ttatgcgact
    18001 aatccggatt gtgcattgcg acctgattat gaaacgatta tggaaaataa tactaataaa
    18061 gagtccttat gtttgcaatc agagaaaggg ggaaaaacat cgtataaaga tattactaaa
    18121 attcaattgg caacaacaga aaaacaaaaa ctactggctt cactcgaggt cgttaacagt
    18181 atgagttcct atgtagagtt gttgacggtg ggtatggatg ttgaggatag taaacaaatt
    18241 atattactta atcaggcgct cgatcacgca aacaacgccc aaaaactact tggcctttca
    18301 gaaggtgaag aactgactaa gtcaactgtg gctgttaaag atttagttca atatttcaat
    18361 ggattataca aagagaagat taaatcagaa aatgttggta aaacggtagg tagtgactgg
    18421 ccacgacttc aaagaaattt acaagattta cttgatgata tagcaacgaa acagcagtaa
    18481 atggatcgga ataattttgc gaacatcagt aataattttt attactataa taaggtccgg
    18541 gcaaatacta aaaatacaga atttaagaca ttaaagagca ggcaggaatt tttgagtgca
    18601 gtaattaatc ttaatgaaag cagattgcgt tcatctgatc cggcggctcc agcaatacaa
    18661 gctattaatg ccttcatgga taaaggaaat catctacaag atttatactc taataaatct
    18721 ctttcaaaag cggatttaga gcgtaggaat gagatcctgc gttctcaagt tattagtggt
    18781 ctacaggcgt cagaggagct ggcaaaactt cttattgcca gctgagttat gttataggag
    18841 gtcattatga acgatgtgca aaatcgacaa atattggcat tgctcaatat gctgtactat
    18901 gccttaggaa accgaacaac ctgcgatata tgtcacaaat attttattct ggttttgtcg
    18961 gtaatgaata atctgactat taattatggc tcgcaaacgt caccagaact ggctgttatt
    19021 agttatgaag atgctaatga tttgatcact gaattaatac tgtttattga agacgtcaat
    19081 gcggataatg atatggaata tcccgcacac ttgaataaaa ttcaagctct tcttaatttt
    19141 gccgtggcta attaagccat tcagtatcta aaattagcac ctcaagaggc gatcttttga
    19201 ggtgctttcc cttaataatc aatccctatt tgcgccttaa caccggcatc aaacgcatgt
    19261 ttgatggggc gcagctcact taccgtatcc gccagttcaa gaatatcccg atgacaacca
    19321 cgacccgtga taatcaccgt ctgttgatgt ggacgttcat ttaacgcctg caccacttct
    19381 tccagtggca aatagtcata cgccaccata tacgtcagtt catcaagcaa aaccatatcc
    19441 agtgaggaat cagcaagcat ccgctttgca tgttgccaga cttcgcggca ggcggcggta
    19501 tcagactcgc ggttttgtgt atcccaggta aagcccgttg ccatcacctg aaactcaacg
    19561 ccatgtggct ccagcagatt gcgttcgcca ttaggctagg tgcctttaat aaactgcacg
    19621 acgcccactt tttttccgtg accaactgcg cgtgttgccg taccaaatgc cgcggtggtt
    19681 ttgccttttc cattgccggt aaagacgatg ataataccgc gttcatcctg ggcctgggcc
    19741 acacgagcat ctactttttc tttcactcgc tgctgacgct gttggtagcg ttcatcactc
    19801 attgggaaat tcctggttta cggcccggtt gggcgtcaaa ggtcatgccg gttttacggc
    19861 ggctgtcatc gcccatcagc cagaggtaga gcggcatgat atcagcgggt gttttaagtt
    19921 tctgtggatc ttcggtcggg aaggcgctgg cacgcattgc ggtgcgcgta ccgcctgggt
    19981 taatgcagtt gacgcgcagg cgctgctgat attcatcggc cagtacctgc atcatccctt
    20041 cggtggcaaa ttttgacgct gcatatgcgc cccagttggc tcgtccctga cgtccaacgc
    20101 ttgatgaagt aaagaccagt gaaccggcgt ccgatttgag taataaagga agcagtgtct
    20161 gggtgagcat aaaggtggca ttaacgttga cctgtatgac gtcctgccag acctgtggat
    20221 tttgttcgct cattggacaa acatcgccga gcaatccggc attatgcaaa acaccatcca
    20281 gacgcggata attaacggca atgcgctgtg ccagttgttg gcaatcttcg gacgtgcagg
    20341 tcagcaaatc gagaataaac cactgtggct gacgcccagt ttcttcgttt atgtggctgg
    20401 ctacctgacg taatttttct tcattacggc ccaacagaat cactgtcgca ccatagcgtg
    20461 catacgtcat cgcggcttca cgaccaatac catcactggc tcccgtcacc aggataatgc
    20521 gatcattgag taaatcttgt tttggctggt aatgcatggc tactcctcaa cgacgttgtc
    20581 tgtcgcgctg ccagtgtact ttatgacttt ggggctttat gcctgaaaca gaagggcatt
    20641 tcaatcagct tggggcgata acaccgcaaa atggatactt tgtcatactt tcgctgcaat
    20701 aacatctctg cgagacggct taacatgcct gttgtaaact gtgagctaaa gcgttgttta
    20761 accaaggtgg ggattcgtgg aattgttgtc tgaatatggt ttgtttttgg cgaaaatcgt
    20821 taccgttgtg ctagcgattg cggcgattgc cgccattatt gtcaatgttg ctcaacgtaa
    20881 taaacgccag cgtggcgagt tacgggtcaa caatctcagc gaacagtata aggagatgaa
    20941 agaagaactg gccgcggcgc tgatggactc acatcagcaa aaacagtggc acaaagcgca
    21001 gaagaaaaag cacaagcaag aagcgaaagc agcaaaagcg aaagccaaac tgggcgaggt
    21061 ggcaactgac agtaaacctc gcgtctgggt gctggatttt aaaggcagca tggacgccca
    21121 tgaagtgaac tcgctacgtg aagagataac ggcggtactc gcagcattca aaccgcagga
    21181 tcaggttgtg ctccgtctgg aaagccctgg tggcatggtg catggttacg ggctggcggc
    21241 ttcgcagctg cagcgtctgc gtgataaaaa cattccttta actgttacgg tagacaaagt
    21301 tgctgccagt ggcggttaca tgatggcctg tgtggcagac aaaattgttt ccgcaccgtt
    21361 tgctattgtg ggttccattg gggtggtggc gcaaatgccc aactttaacc gcttcctgaa
    21421 aagcaaagat attgatatcg aactgcacac cgccgggcag tataagcgca cgctgacgtt
    21481 gctgggtgaa aataccgaag aagggcggga gaaattccgc gaagagctga acgaaacgca
    21541 tcagttattt aaagattttg tgaagcgtat gcgtccgtct ctggatattg atcaggtggc
    21601 aacgggtgaa cactggtacg gacaacaggc ggtagagaaa ggcctggttg atgaaatcaa
    21661 caccagtgat gaagttattc ttagcctgat ggaaggccgt gaagtggtca atgtacgcta
    21721 tatgcagcgt aaacgactca ttgaccgatt caccggcagc gcggcagaga gcgccgatcg
    21781 attgttgcta cgctggtggc agcgggggca aaagccattg atgtaaaaga caaacgcgag
    21841 ggtaagacct cgcgttttgc tttaatcaac cagatgatat ttttctgaaa gcacatgggc
    21901 caggtgtttg aacatattaa acaccgcggt gcttttggct gttggcaatc cttgttcatc
    21961 taaaaagtag tcgccggtaa ataccagcac gccattacgc tgcgtgacgc cggtggcttc
    22021 aatccctgcg agcgtatcct catgctcacg aatgattttg ttggcctctt tcaacagcgt
    22081 ctcgcggtcg atgggttgtg tctctttgtt cattatttac tccttaaaca aggacattag
    22141 tctacgccag gcatggcttg cagacaaata taccacgctg gtggcaagag cgccttactg
    22201 gcaactttgg attttgcatg ctaataaagt tgcgtatcgg attttatcag gtacagtgtg
    22261 acgctttcgt caatctggca atagatttgc ttgacattcg accaaaattc cgtcgtgcta
    22321 tagcgcctgt aggccaagac ctgttaactc agtcacctga attttcgtga acagagtcac
    22381 gacaaggggt tgatatccgc agagagcgag tccatatcgg taactcgttg ccagtggaag
    22441 gtttatcaac gtgcgacgca ttcctggaag aatcaaatta ggtaaggtga atatgggtaa
    22501 agctcttgtc atcgttgagt ccccggcaaa agccaaaacg atcaacaagt atctgggtag
    22561 taactacgtg gtgaaatcca gcgtcggtca catccgcgat ttgccgacca gaggctcagc
    22621 tgccaaaaag agtgccgact ctacctccac caagacggct aaaaagccta aaaaggatga
    22681 acgtggcgct ctcgtcaacc gtatgggggt tgacccgtgg cacaattggg aggcgcacta
    22741 tgaagtgttg cctggtaaag agaaggtcgt ctctgaactg aaacaactgg ctgaaaaagc
    22801 cgaccacatc tatctcgcaa ccgaccttga ccgcgaaggg gaagccattg catggcacct
    22861 gcgggaagtg attggtggtg atgatgcgcg ctatagccga gtggtgttta acgaaattac
    22921 taaaaacgcg atccgccagg catttaacaa accgggtgag ctgaatattg atcgtgttaa
    22981 tgcccagcag gcgcgtcgct ttatggaccg cgtggtgggg tatatggttt cgccgctgct
    23041 atggaaaaag atcgctcgtg gtctgtctgc cggtcgtgtg cagtcggtgg cggttcgcct
    23101 ggtggtcgag cgtgagcgtg aaattaaagc gttcgtgccg gaggagttct gggaagtcga
    23161 tgccagcacg accacgccat ctggtgaagc gttggcgtta caggtgactc atcagaacga
    23221 caaaccgttc cgtccggtca acaaagaaca aactcaggct gcggtaagtc tgctggaaaa
    23281 agcgcgctac agcgtgctgg aacgtgaaga caaaccgaca accagtaaac ctggcgctcc
    23341 ttttattacc tctacgctgc aacaagctgc cagcacccgt cttggatttg gcgtgaaaaa
    23401 aaccatgatg atggcgcagc gtttgtatga agcaggctat atcacttaca tgcgtaccga
    23461 ctccactaac ctgagtcagg acgcggtaaa tatggttcgc ggttatatca gcgataattt
    23521 tggtaagaaa tatctgccgg aaagtccgaa tcagtacgcc agcaaagaaa actcacagga
    23581 agcgcacgaa gcgattcgtc cttctgacgt caatgtgatg gcggaatcgc tgaaggatat
    23641 ggaagcagat gcgcagaaac tgtaccagtt aatctggcgt cagttcgtag cctgccagat
    23701 gaccccagcg aaatatgact ccacgacgct ggccgttggt gcgggcgatt tccgcctgaa
    23761 agcacgcggt cgtattttgc gttttgatgg ctggacaaaa gtaatgcctg cgttgcgtaa
    23821 aggcgatgaa gatcgcatct taccagcagt taataaaggc gatgctctga cgctcgttga
    23881 actgacacca gcccagcact ttaccaagcc gccagcccgt ttcagtgaag catcgctggt
    23941 taaagagctg gaaaaacgcg gtatcggtcg tccgtctacc tatgcgtcga tcatttcgac
    24001 cattcaggat cgtggctacg tgcgagtaga aaatcgtcgt ttctatgcgg aaaaaatggg
    24061 cgaaatcgtc accgatcgcc ttgaagaaaa tttccgcgag ttaatgaact acgacttcac
    24121 cgcacagatg gaaaacagcc tcgaccaggt ggcaaatcac gaagcagagt ggaaagctgt
    24181 actggatcac ttcttctcgg atttcaccca gcagttagat aaagctgaaa aagatccgga
    24241 agagggtggt atgcgcccga accagatggt tctgaccagc attgactgcc cgacttgtgg
    24301 tcgcaaaatg gggattcgca cagcgagcac cggggtattc cttggctgtt ctggctatgc
    24361 gctgccgccg aaagagcgtt gcaaaaccac cattaacctg gtgccggaaa acgaagtgct
    24421 gaacgtgccg gaaggcgaag acgctgaaac caacgcgctg cgcgcaaaac gtcgttgccc
    24481 aaaatgcggc acggcgatgg acagctatct catcgatccg aaacgtaagt tgcatgtctg
    24541 tggtaataac ccaacctgcg acggttacga gattgaagag ggcgaattcc gcattaaagg
    24601 ttatgacggc ccgatcgttg agtgtgaaaa atgtggctct gaaatgcacc tgaaaatggg
    24661 gcgtttcggt aaatacatgg cctgcaccaa cgaagagtgt aaaaacacac gtaagatttt
    24721 acgtaacggc gaagtggcac caccgaaaga agatccggtg ccattacctg agctgccgtg
    24781 cgaaaaatca gatgcttatt tcgtgctgcg tgacggtgct gccggtgtgt tcctggctgc
    24841 caacactttc ccgaaatcgc gtgaaacacg tgcgccactg gtggaagagc tttatcgctt
    24901 ccgcgaccgt ctgccggaaa aactgcgtta tctggccgat gcgccacagc aggatccgga
    24961 aggtaataag accatggttc gctttagccg taaaaccaaa cagcaatatg tctcttcgga
    25021 aaaagacgga aaggcgactg gctggtcggc attttatgtt gatggcaaat gggttgaagg
    25081 gaaaaaataa cctttaattt tgtcaggttt ttataaacaa agggtcgcga aagcggccct
    25141 tttttattgc atattatttt ttcttcacac ctatacacta aggctataaa tgatatagtg
    25201 gttatagtta gcaccttttt tattattaaa tcgtattagt cgcgccgcct ggtgtgacga
    25261 aaaaacgatg ttctgatggc gtctaagtgg atggtttaac atgaaattac aacaacttcg
    25321 ctatattgtt gaggtggtca atcataacct gaatgtctca tcaacagcgg aaggacttta
    25381 cacatcacaa cccgggatca gtaaacaagt cagaatgctg gaagacgagc taggcattca
    25441 aattttttcc cgaagcggca agcacctgac gcaggtaacg ccagcagggc aagaaataat
    25501 tcgtatcgct cgcgaagtcc tgtcgaaagt cgatgccata aaatcggttg ccggagagca
    25561 cacctggccg gataaaggct cactgtatat cgccaccacg catacccagg cacgctacgc
    25621 attaccaaac gttatcaaag gctttattga gcgttatccc cgcgtttctt tgcatatgca
    25681 ccagggctcg ccgacacaaa ttgctgatgc cgtttctaaa ggcaatgctg attttgctat
    25741 cgccacagaa gcgttgcatc tgtatgaaga tttagtgatg ttaccgtgct accactggaa
    25801 tcgggcaatt gtagtcactc cggatcaccc gctggcaggc aaaaaagcca ttaccattga
    25861 agaactggcg caatatccgt tggtgacata taccttcggc tttaccggac gttcagaact
    25921 ggatactgcc tttaatcgcg cagggttaac gccgcgtatc gttttcacgg caacggatgc
    25981 tgacgtcatt aaaacttacg tccggttagg gctgggggta ggggtcattg ccagcatggc
    26041 ggtggatccg gtcgccgatc cggaccttgt gcgtgttgat gctcacgata tcttcagcca
    26101 cagtacaacc aaaattggtt ttcgccgtag tacttttttg cgcagttata tgtatgattt
    26161 cattcagcgt tttgcaccgc atttaacgcg tgatgtcgtt gatgcggctg tcgcattgcg
    26221 ttctaatgaa gaaattgagg tcatgtttaa agatataaaa ctgccggaaa aataatttct
    26281 tgcgttattt tcggcacctt ttatgtagcg aaggtgccgg aatatattct cttttgttac
    26341 ttatttgtat accgtgcaca atatttttat ccctcatatt tatagggtaa attacctgta
    26401 aagtagtgtc taattacccg cctcgcaaat tccagttttc aaatatctat ttcaggtcaa
    26461 aagattgaat tattcactgg agacgattcg taaattcgct ggatttttga ctaaagtttc
    26521 tttaggattt gtctcatcgt atgattaatt acaccaatcg ttcagcgtct tgctgataag
    26581 tgatggcgat tatatgaggt tagcaatgcc ttctggaaat caggaacccc gccgcgatcc
    26641 tgaattaaaa cgtaaagcct ggctggcggt ttttcttggt tttgcacttt tctgggtggt
    26701 tgtcgcactg ctgatttgga aagtgtgggg ataactatgg ttggtcagga gcaactggag
    26761 tcgtcatcat tatgccagca tagtgacaat gaaccagaaa cgaaaatgtt ccgtcgttat
    26821 tccagacgac tggcaactaa catcgcagca gcaagccttt atagaactgt ttgctgaaga
    26881 tgatcagccg aaacaataat tatcatcatt cttattaccc atttttaatg aattaaaggg
    26941 cttttaatac accgcagcaa taacaggttg agttatctca acacaaagta ataaccgtta
    27001 agggtgtagc ctatgatcaa cacaaatatg aaatattggt cctggatggg cgcgttttct
    27061 ctgtcgatgc tcttctgggc cgaactcctc tggatcatta ctcactgatc cttgaccccg
    27121 ctgcggcggg gttgtcattt gctttgccac aaggtttttc ctcttttatc aatttgggtt
    27181 gttatcaaat cgttacgcga tgtttgtgtt atctttaata ttcaccctga agagaatcag
    27241 ggcttcgcaa ccctgtcatt aaggaggagc tatgtcgtca accctacgag aagtcagtaa
    27301 ggacgcgttg caggccaaag ataaaactta ccactactac agcctgccgc ttgctgctaa
    27361 atcactgggc gatatcaccc gtctacccaa gtcactcaaa gttttgctcg aaaatctgct
    27421 gcgctggcag gatggtaact cggttaccga agaggatatc cacgcgctgg cgggatggct
    27481 gaaaaatgcc catgctgacc gtgaaattgc ctaccgcccg gcaagggtgc tgatgcagga
    27541 ctttaccggc gtacctgccg ttgttgatct ggcggcaatg cgcgaagcgg ttaaacgcct
    27601 cggcggcgat actgcaaagg ttaatccgct ctcaccggtc gatctggtca ttgaccactc
    27661 ggtgactgtc gatcgttttg gtgatgatga ggcatttgaa gaaaacgtac gcctggaaat
    27721 ggagcgcaac cacgaacgtt atgtgttcct gaaatgggga aagcaggcgt tcagtcggtt
    27781 tagcgtcgtg ccgtcaggca caggcatttg ccatcaggtt aacctcgaat atctcggcaa
    27841 agcagtgtgg agtgaattgc aggacggtga atggattgct tatccggata cactcgttgg
    27901 tactgactcg cacaccacca tgatcaacgg ccttggcgtg ctggggtggg gcgttggtgg
    27961 catcgaagca gaagccgcaa tgttaggcca gccggtttcc atgcttatcc cggacgtagt
    28021 gggctttaaa cttaccggaa aattacgtga aggtattacc gccacagacc tggttctcac
    28081 tgttacccaa atgctgcgca aacatggcgt ggtggggaaa ttcgtcgaat tttatggtga
    28141 tggtctggat tcactaccgt tggcggatcg cgccaccatt gccaatatgt cgccagaata
    28201 tggtgccacc tgtggcttct tcccaatcga tgctgtaacc ctcgattaca tgcgtttaag
    28261 cgggcgcagc gaagatcagg tcgagttggt cgaaaaatat gccaaagcgc agggcatgtg
    28321 gcgtaacccg ggcgatgaac cgatttttac cagtacgtta gaactggata tgaatgacgt
    28381 tgaagcgagc ctggcagggc caaaacaccc acaggatcgc gttgcactgc ccgatgtacc
    28441 aaaagcattt gccgccagta acgaactgga agtgaatgcc atgcataaag atcgccagcc
    28501 ggtcgattat gttatgaacg gacatcagta tcagttacct gatggcgctg tggtcattgc
    28561 tgcgataacc tcgtgcacca acacctctaa cccaagtgtt ctgatggccg caggcttgct
    28621 ggcgaaaaaa gccgtaactc tgggcctcaa gcggcaaccg tgggtcaaag cgtcgctggc
    28681 accgggttcg aaagtcgttt ctgattatct ggcaaaagcg aaactgacac cgtatctcga
    28741 cgaactgggg tttaaccttg tgggatacgg ttgtaccacc tgtattggta actctgggcc
    28801 gctgcccgat cctatcgaaa cggcaatcaa aaaaggcgat ttaaccgtcg gtgcagtgct
    28861 gtccggcaac cgtaactttg aaggccgtat ccatccgctg gttaaaacca actggctggc
    28921 ctcgccgccg ctggtggttg cctatgcgct ggcgggaaat atgaatatta acctggctgc
    28981 tgagcctatt ggtcatgatc gtaaaggcga cccggtttat ctgaaagata tctggccatc
    29041 ggcacaagaa attgcccgtg cggtagaaca agtctccaca gaaatgttcc gtaaagagta
    29101 cgcagaggtt tttgaaggca cagcagagtg gaaggaaatt aacgtcacac gatccgatac
    29161 ctacggttgg caggaggatt caacctatat tcgcttatcg cctttctttg atgaaatgca
    29221 ggcaacacca gcacctgtgg aagatattca cggtgcgcgg atcctcgcaa tgctagggga
    29281 ttcagtcacc actgaccata tctctccggc gggcagtatt aagcccgaca gcccggcggg
    29341 tcgatatcta caaggtcggg gtgttgagcg aaaagacttt aactcctacg gttcgcggcg
    29401 tggtaaccat gaagtgatga tgcgcggcac cttcgccaat attcgcatcc gtaatgaaat
    29461 ggtgcctggc gttgaagggg ggatgacgcg gcatttacct gacagcgaca tcgtctctat
    29521 ttatgatgct gcgatgcgct ataagcagga gcaaacgccg ctggcggtga ttgccgggaa
    29581 agagtatgga tcaggctcca gccgtgactg ggcggcaaaa ggtcctcgtc tgcttggaat
    29641 tcgtgtggtg attgccgaat cgtttgaacg aattcaccgt tcgaatttaa ttggcatggg
    29701 catcctgccg ctggaatttc cgcaaggcgt aacgcgtaaa acgttagggc taaccgggga
    29761 agagaagatt gatattggcg atctgcaaaa cctacaaccc ggcgcgacgg ttccggtgac
    29821 gcttacgcgc gcggatggta gccaggaagt cgtaccctgc cgttgtcgta tcgacaccgc
    29881 gacggagttg acctactacc agaacgacgg cattttgcat tatgtcattc gtaatatgtt
    29941 gaagtaacaa gtatttgctt gccggttatt ttgcttccgg caagcaaatg aattacacaa
    30001 tgcaagaggg ttatttgttc agcaaatggc ccattttctc ggctttggta tcgagataat
    30061 gttcgttatt ggggttacga cctacaatca atggtacgcg ttcaacaata ttaatccctg
    30121 cttcggtcag aatttcgact tttttcgggt tattggttaa caagcggact tcattgacgc
    30181 caaggagttt gaacatatca gcgcaaagag tgaagtcgcg ctcatcagcg gcgaagccta
    30241 actggtggtt agcctctacg gtatcgtaac cttgatcctg cagtgcgtaa gcgcggattt
    30301 tattcagcag accaatgtta cgaccttcct gacggtgata cagcaaaata ccacggcctt
    30361 cctcggcaat ttgcgtcaat gccgcttcga gctggaagcc acaatcgcag cgcaagctga
    30421 acagggcgtc accggtcaga cattcggaat ggacgcgcgc aagtaccggg gtatgcccgg
    30481 aaatatcgcc atagactagc gcgacatgat cgtgtccggt tgccagttct tcaaatccca
    30541 ccatcaggaa atcgccccat ggggttggca gtttggcttc tgccacacgt ttaagctgca
    30601 tgaaattctc cagataatgc tggttctgta ttggcttatt ttgccataac gagaaggggt
    30661 tcacctaatc acgacgcgtc gatcgttcac ggaatggcac aaatctgtca atttttcctg
    30721 gaactggcat tttcagttat gattgtggga cttatcaaaa aggagaggcc atgcgttcga
    30781 ttgcccgaca taccgcagtg ggagctgcac tattgcttgt tatgccagta gccgtatgga
    30841 tttctggctg gcgttggcaa cctggagaac aaagttggct actaaaagcg gctttttggg
    30901 ttactgaaac tgtcacccag ccctggggcg tcattacaca tttgatttta ttcggctggt
    30961 ttctctggtg tctgcgtttt cgcattaagg ctgcctttgt attatttgcc attctggcgg
    31021 cggcaatcct tgtgggacaa ggcgttaaat cttggatcaa agacaaagtc caggaaccac
    31081 gaccttttgt tatctggctg gaaaaaacac atcatattcc ggttgatgag ttctacactt
    31141 taaagcgagc agaacgcgga aatctagtga aagaacagtt ggctgaagag aaaaatatcc
    31201 cacaatattt gcgttcacac tggcagaaag agacggggtt tgcctttcct tccggtcaca
    31261 cgatgtttgt tgccagttgg gcactgctgg ccgttggttt gctgtggccg cgtcggcgaa
    31321 cgttaaccat tgctatcttg ctggtctggg caacgggagt catgggaagc cgcctgctgc
    31381 tcgggatgca ttggccacgc gatctggtgg tagctacgtt gatttcgtgg gcgctggtgg
    31441 cggtggcaac gtggcttacg caacgaattt gtgggccatt aacaccgcct gcggaagaaa
    31501 atcgcgaaat agcgcaacga gaacaagaaa gttaacgctg gttgattttc cgaatttagc
    31561 ccttaaatca tcaacaatgc gcgtggatgc catttcgcag acggcgcgaa aatggtactt
    31621 taaagggcta ttgcggtaag ttgaccataa tttattcgct ctaaccacat aacgggaagt
    31681 aatgtgaaat atttactcat tttcttactg gtgttagcga tcttcgtgat ttcggtcacg
    31741 ttgggtgcgc agaacgatca acaggtgacg tttaattatc tgttagcgca aggggagtac
    31801 cgtatttcca cattgctggc ggtattgttt gctgcgggtt ttgctattgg ttggttgatt
    31861 tgtggcctgt tctggctgcg agttcgtgtt tcccaggtgc gcgctgaacg taaaataaag
    31921 cgactggaaa accagctttc acccgcgact gacgtggctg tagcgccgca ctcgtcagcg
    31981 gcgaaggaat aactttctat gctggagttg ttgtttctgc ttttgcctgt agccgctgcc
    32041 tatggctggt atatgggccg cagaagtgcg caacaaaaca agcaagatga agccaaccgc
    32101 ttgtcgcgtg attacgtagc gggggttaac ttcctgctta gtaatcaaca ggataaagcg
    32161 gtagacctgt ttctcgatat gcttaaagag gatacaggca ccgttgaagc ccaccttacg
    32221 ctcgggaacc tgttccgttc gcgtggcgaa gttgatcgcg ctattcgcat ccatcagacc
    32281 ctaatggaaa gcgcctcgct gacctatgaa cagcgtctgt tggcgattca acaactgggg
    32341 cgtgattaca tggccgccgg gttatacgac cgcgcggaag acatgttcaa tcagctgacc
    32401 gatgaaactg acttccgcat tggcgcgctg caacagttgc tacaaatcta ccaggctacc
    32461 agtgagtggc agaaagcaat tgatgttgcc gaacgcctgg tgaagctggg taaagataaa
    32521 cagcgcgtcg aaattgccca tttctactgt gagttagccc tgcagcatat ggccagcgac
    32581 gatctcgatc gtgccatgac cttgctaaaa aaaggggcgg cggcagataa aaacagcgcc
    32641 cgcgtatcca tcatgatggg ccgcgtgttt atggcgaaag gagagtacgc caaagccgtc
    32701 gaaagtttgc aacgtgtcat atcccaggac agagaactgg ttagcgaaac gctggaaatg
    32761 ttgcaaacct gctatcagca gttgggtaaa actgccgaat gggcagaatt cctgcaacgc
    32821 gcggtggaag agaacaccgg tgctgatgct gaactgatgc ttgcggatat catcgaagcg
    32881 cgcgacggta gtgaggctgc acaggtctat attacgcgcc agcttcagcg tcatccgacc
    32941 atgcgtgtgt tccataagtt aatggattac cacttaaatg aagcggaaga agggcgtgcc
    33001 aaagagagcc tgatggtgct gcgtgacatg gttggcgaga aggtacgtag taagcctcgt
    33061 tatcgctgcc agaaatgtgg ttttaccgca tacaccctct actggcattg tccgtcttgt
    33121 cgggcctggt caaccattaa accgattcgc ggtcttgatg gcctgtaatt tttaaaaaaa
    33181 atccgacttt agttacaaca tactaattat tgatgttcca ttgtgctccg gcaacaacgg
    33241 cgcagaaaaa gcctgccagg ggagaaatcg caactgttaa ttttttattt ccacgggtag
    33301 aatgctcgcc gtttacctgt ttcgcgccac ttccggtgcc catcatcaag aaggtctggt
    33361 catgacgtta actgcttcat cttcttcccg cgctgttacg aattctcctg tggttgttgc
    33421 ccttgattat cataatcgtg atgacgcgct gtcctttgtc gacaagatcg acccacgcga
    33481 ttgtcgtctg aaggtcggca aagagatgtt tacattgttt gggccacagt ttgtgcgcga
    33541 acttcaacaa cgtggttttg atatctttct tgacctgaaa ttccacgata tccccaacac
    33601 tgtagcgcac gctgtcgctg ctgcagctga cttaggcgtg tggatggtga atgttcatgc
    33661 ctctggtggg gcgcgtatga tgaccgcagc gcgtgaggca ctggttccgt ttggcaaaga
    33721 tgcaccgctt ttgattgctg tgacagtgtt gaccagcatg gaagccagcg acctagccga
    33781 tcttggcgtg acactgtcac ctgcagatta tgcagaacgt ctggcggcac tgacgcaaaa
    33841 atgtggcctt gatggtgtgg tgtgttctgc acaggaagct gtgcgcttta aacaggtatt
    33901 cggtcaggag ttcaaactgg ttacgccggg cattcgtccg caggggagtg aagctggtga
    33961 ccagcgccgc attatgacgc cagaagaggc gttggcggct ggtgttgatt atatggtgat
    34021 tggtcgcccg gtaacgcaat cggtagatcc agcgcagacg ctgaaagcga tcaacgcctc
    34081 tttacagcgg agtgcatgat gagtgattcc aacagccgtc tggtctactc aacggaaacc
    34141 gggcgtactg atgagcccaa agcggcccca gtacgcccta aaggcgatgg agtggtgcgt
    34201 attcagcgtc agaccagtgg acgtaaaggt aagggcgttt gcctgattac cggtatcgat
    34261 ctcgatgatg ccgaactgac aaaacttgca gcggaactga agaaaaaatg cggctgcggc
    34321 ggagcagtta aagatggagt tattgaaatc cagggcgata agcgtgattt attaaaatca
    34381 ctacttgaag cgaaagggat gaaggtaaaa ctcgcaggcg gttaacataa aaagccacgg
    34441 atatatccgt ggctttcgaa tattttactg tgtgtattat tcagttattt cgtactgaac
    34501 agaatcaagc gtattataat tgcgagtcga taatcgacat ttatttacga ttatttaccg
    34561 acctggtgac caataacacc accgacagct gcaccaccta atgtacccaa cgtactgcca
    34621 tcggtcagta ctgcaccgcc taatgcccct gcacctgcgc cgattgcggt gttgcggtcc
    34681 cgtttagacc agttagaaca ggcactcaga gacattgcca aagtaattgc cagaacagcc
    34741 gcggtcattt ttttgctcgt tacaaacata atactctctc ctgaatttat gattcacgga
    34801 agtaagctct ctataactat aatagctaag aataagcctg gtgaaattat tccgtgaaat
    34861 ctgctcgcgc gcagggttat atcacgcagg tgataattac ttcctgttat atcgctgata
    34921 ataattttat atcttgagag tgttaataac aggtaaatag tcttaattat caaccaggaa
    34981 tcatcttaga gcggatgatt tgccaaactg caaatcatcc gtagagaagg gaaatggtta
    35041 aatgtcaacg acgtgaacgg tgagtttact gtgctcaaga tgcatcagat cgctggcgcg
    35101 tattttcgaa tcggtaatca cgcgattgaa tcgctcaacg ggaccgatgg agtatgaatg
    35161 tacagcacca aatttcgagc tgtcagtcag gactatcgct tcgcactctt tttccagcac
    35221 ggcattgacc acatcggtac gcatcatatc gcgaccggtg aatccagttt caggttgcca
    35281 gccatcaata ccaataaatg ctttgctgaa atgtacctgc tggatgcact ggcgtgtcaa
    35341 agggccaacc atactttcgc tttttttctg gtacacgcca ccgagcaaaa tgacttcaca
    35401 aggcgcgtct ttcagcaaat gcgcaatgta gctgctgact gtgatgatag tgacattttt
    35461 cttctgttcg cccagagtcc gggcgagcag ggcattgctg ctgccatttt cgataaagat
    35521 ggtttcgccc ggttgaacca gtgacgcggc aaactcggcg agttcacgct tcagcatata
    35581 gttgctcatc atacgggttt cgacgtcatc actatcaagc gaaactgcaa agccatgtgc
    35641 acggcggagg taactcagtt tttcgagggt gttgagatcc tggcgaatgg taacttcaga
    35701 aactccagtg gcttttgcca gatcggttac gctaacctga ccctggtcaa ttaccatctg
    35761 tagaatagtt tgttgtcggg aattcatcgc tgtaattctt ataacgttat aatactaaat
    35821 aaaaaaatac tgacgcgccg ggcatcctca aataggaaaa cctgaaggca cgattgttaa
    35881 atctcccacg gtgccttcgg gatgtctggc gtagattcag caacctggcg caagagttct
    35941 gctttaagta tctcgagatt atggatcgca gagtggtaat cgcctgccac aaggatatct
    36001 aacacaatat caatacgttc ggcaacgcgc tgggcatcaa attcagacat caaggacatc
    36061 cttatagcaa aagggggaaa atgaataatg caaaaattgc cgctaaaaga gaagtgttta
    36121 acagcaacgg ctaattatca tcctggaata cgatatataa tgacggaata taacgctaag
    36181 tatatatatt catctactta tgtgcgcttc agatagcgtt tataccagcg ttcgaaggcg
    36241 acggcgggca tcggtttggc aaacaaaaat ccttgccgct cattgatccc gttcttggtt
    36301 aaaaaagcat cttcctttgc actctctaca ccttcggcga tcacctgaag attcaatgcc
    36361 taggccacag cgacgatcgc ccggaccagt gactgcgaga caggctgttt gtgaatatct
    36421 cgaacaaata cctggtcaag tttgatggca tcgatcggaa agcgcgccag ttgcgaaagt
    36481 gaagagtagc cggtaccaaa atcgtccaaa tgcacttgcg cacctagttg gctaaattgt
    36541 tgaataacag atagtgccag ttcatcattc tcaatcagac aactctctgt tagttcaaca
    36601 tcaatagggc agtattcaaa attgagttcc tggagaacct gtttcagggc ggtgaaaatg
    36661 gtttgatcgg cgagttgacg tgcagaaatg tttaccgcca ctcgcaggtt aatgccttta
    36721 tcccgccact tcgccacctg gcgtacgaca tcgagaatca cccaacggcc taaaggcaca
    36781 attagccctg actcttcggc gtaggaaatg aagtccaacg gtggaatcaa cccacgttca
    36841 ggtgactgcc aac
//
LOCUS       DAJVTL010000026        36481 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.026, whole genome shotgun sequence.
ACCESSION   DAJVTL010000026 DAJVTL010000000
VERSION     DAJVTL010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36481
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.026"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..321)
                     /locus_tag="OQQ26_001271"
     CDS             complement(<1..321)
                     /locus_tag="OQQ26_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HCS1856781.1"
                     /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
                     PFADL"
     gene            complement(450..1421)
                     /gene="secF"
                     /locus_tag="OQQ26_001272"
     CDS             complement(450..1421)
                     /gene="secF"
                     /locus_tag="OQQ26_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HCS1856782.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
                     GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            complement(1432..3279)
                     /gene="secD"
                     /locus_tag="OQQ26_001273"
     CDS             complement(1432..3279)
                     /gene="secD"
                     /locus_tag="OQQ26_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HCS1856783.1"
                     /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
                     ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
                     LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
     gene            complement(3307..3639)
                     /gene="yajC"
                     /locus_tag="OQQ26_001274"
     CDS             complement(3307..3639)
                     /gene="yajC"
                     /locus_tag="OQQ26_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HCS1856784.1"
                     /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            complement(3662..4789)
                     /gene="tgt"
                     /locus_tag="OQQ26_001275"
     CDS             complement(3662..4789)
                     /gene="tgt"
                     /locus_tag="OQQ26_001275"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HCS1856785.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
     gene            complement(4844..5914)
                     /gene="queA"
                     /locus_tag="OQQ26_001276"
     CDS             complement(4844..5914)
                     /gene="queA"
                     /locus_tag="OQQ26_001276"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HCS1856786.1"
                     /translation="MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGAELLLGDDESINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
                     TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
                     FDDTQIFIYPGFQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
                     FSYGDAMFITYNPQAINERVGE"
     gene            6007..6588
                     /gene="acpH"
                     /locus_tag="OQQ26_001277"
     CDS             6007..6588
                     /gene="acpH"
                     /locus_tag="OQQ26_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HCS1856787.1"
                     /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM
                     HRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFV
                     CYAREQVITILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR
                     DSWYDLDAHYDALETRFWQFYPRMMAQASHKAL"
     gene            complement(6593..8410)
                     /gene="malZ"
                     /locus_tag="OQQ26_001278"
     CDS             complement(6593..8410)
                     /gene="malZ"
                     /locus_tag="OQQ26_001278"
                     /EC_number="3.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
                     /protein_id="HCS1856788.1"
                     /translation="MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDN
                     EEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLRHDRQRWFTPQGFSRMP
                     PARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILR
                     DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYR
                     HVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNLGTGGACHNPES
                     PWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWSMDGW
                     RLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAM
                     NYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDT
                     ARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQD
                     TALFALYQRMIALRKKSQALRRGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEV
                     VLPASPLLNAVQWQCKEGHGQLTDGILALPAISATVWMN"
     gene            complement(8566..9939)
                     /gene="proY"
                     /locus_tag="OQQ26_001279"
     CDS             complement(8566..9939)
                     /gene="proY"
                     /locus_tag="OQQ26_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HCS1856789.1"
                     /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
                     IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
                     VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
                     RQLAENQ"
     gene            complement(10015..11334)
                     /gene="brnQ"
                     /locus_tag="OQQ26_001280"
     CDS             complement(10015..11334)
                     /gene="brnQ"
                     /locus_tag="OQQ26_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter carrier
                     protein BrnQ"
                     /protein_id="HCS1856790.1"
                     /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
                     TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVEQSANGAAILHAYVQHTFG
                     GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS
                     QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
                     SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH"
     gene            complement(11740..13035)
                     /gene="phoR"
                     /locus_tag="OQQ26_001281"
     CDS             complement(11740..13035)
                     /gene="phoR"
                     /locus_tag="OQQ26_001281"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HCS1856791.1"
                     /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
                     FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNE
                     KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
                     EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
     gene            complement(13093..13782)
                     /gene="phoB"
                     /locus_tag="OQQ26_001282"
     CDS             complement(13093..13782)
                     /gene="phoB"
                     /locus_tag="OQQ26_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HCS1856792.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLND
                     PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEMIEMQGLSLDPTSHRVMAGEEPLEMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
                     RGTGYRFSTRF"
     gene            13972..15174
                     /gene="sbcD"
                     /locus_tag="OQQ26_001283"
     CDS             13972..15174
                     /gene="sbcD"
                     /locus_tag="OQQ26_001283"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HCS1856793.1"
                     /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
                     VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
                     TVVASARHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDY
                     YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI
                     ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
                     QPMAVLKGDLASITAQLEQWRDVSPEPPVWLDIEITTDEYLHDIQRKIQALTESLPVE
                     VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFATTLH
                     SLAGEHEA"
     gene            15171..18314
                     /gene="sbcC"
                     /locus_tag="OQQ26_001284"
     CDS             15171..18314
                     /gene="sbcC"
                     /locus_tag="OQQ26_001284"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HCS1856794.1"
                     /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
                     NQPDGNLQVPRIELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQVQASGVALLTPEQV
                     QSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASLRQQALQQALAEEEKA
                     QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA
                     AKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
                     EQKLNTLAAITLTLTADEVASALAQHSEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
                     NVTLEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
                     CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
                     AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHERQLRLLRQRHELQGQ
                     IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
                     ELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
                     VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT
                     LVTQTAETLAQHQQHRPDGVALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
                     DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
                     TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH
                     KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK
                     KINGLGYSKLESTFAVK"
     gene            18440..19624
                     /gene="araJ"
                     /locus_tag="OQQ26_001285"
     CDS             18440..19624
                     /gene="araJ"
                     /locus_tag="OQQ26_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
                     /protein_id="HCS1856795.1"
                     /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI
                     SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
                     FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF
                     LLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGNAGVFAW
                     FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV
                     LALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
                     LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADSPVLAKP
                     LG"
     gene            complement(19772..20674)
                     /gene="mak"
                     /locus_tag="OQQ26_001286"
     CDS             complement(19772..20674)
                     /gene="mak"
                     /locus_tag="OQQ26_001286"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308471.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
                     /protein_id="HCS1856796.1"
                     /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA
                     TLVDMAEQATGQRGTVGMGIPGAISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL
                     ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPL
                     PWMDEDELRYREEVPCYCGKQGCIETFISGTGFATDYRRLSGHALKGSEIISLVEESD
                     PVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVPQLIKQFVFGGE
                     CETPVRKAKHGDSSGVRGAAWLWP"
     gene            20799..21710
                     /gene="rdgC"
                     /locus_tag="OQQ26_001287"
     CDS             20799..21710
                     /gene="rdgC"
                     /locus_tag="OQQ26_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HCS1856797.1"
                     /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
                     WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
                     ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQNLIEGLGGEAQR"
     gene            complement(21788..22243)
                     /locus_tag="OQQ26_001288"
     CDS             complement(21788..22243)
                     /locus_tag="OQQ26_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856798.1"
                     /translation="MTQRPWSKLQREIYDLLTPTINLQIHCTRYPMRSQNGGSTDLPR
                     YWITLDKNVIWDYPKDFIAGNGGVRNFHGETCWYPYLTDICSISDLLREYIDTPKAEL
                     LTKQFTSDKWGLVNILRAADRRIGMRRLDQLRRKTHNIAALKIIARRSE"
     gene            complement(22240..22581)
                     /locus_tag="OQQ26_001289"
                     /pseudo
     CDS             complement(22240..22581)
                     /locus_tag="OQQ26_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308469.2"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing protein"
     gene            complement(22729..23013)
                     /gene="ppnP"
                     /locus_tag="OQQ26_001290"
     CDS             complement(22729..23013)
                     /gene="ppnP"
                     /locus_tag="OQQ26_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HCS1856799.1"
                     /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
                     MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            complement(23085..23762)
                     /locus_tag="OQQ26_001291"
     CDS             complement(23085..23762)
                     /locus_tag="OQQ26_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
                     /protein_id="HCS1856800.1"
                     /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
                     VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
                     SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
                     GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
                     LAAELLV"
     gene            complement(24020..24211)
                     /gene="yaiA"
                     /locus_tag="OQQ26_001292"
     CDS             complement(24020..24211)
                     /gene="yaiA"
                     /locus_tag="OQQ26_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HCS1856801.1"
                     /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
                     PTAQEAMDAKKRYEDPDKE"
     gene            complement(24261..24785)
                     /gene="aroL"
                     /locus_tag="OQQ26_001293"
     CDS             complement(24261..24785)
                     /gene="aroL"
                     /locus_tag="OQQ26_001293"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HCS1856802.1"
                     /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
                     VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA
                     PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
                     ISEIRSALAQTINC"
     gene            complement(24968..25426)
                     /locus_tag="OQQ26_001294"
     CDS             complement(24968..25426)
                     /locus_tag="OQQ26_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HCS1856803.1"
                     /translation="MTIWGDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
                     IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAAINPRGERYTPATI
                     RERLAMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG"
     gene            25546..26355
                     /gene="proC"
                     /locus_tag="OQQ26_001295"
     CDS             25546..26355
                     /gene="proC"
                     /locus_tag="OQQ26_001295"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HCS1856804.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAA
                     LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL
                     DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTTEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
                     GEHLGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
     gene            complement(26372..27487)
                     /gene="adrA"
                     /locus_tag="OQQ26_001296"
                     /gene_synonym="dgcC"
     CDS             complement(26372..27487)
                     /gene="adrA"
                     /locus_tag="OQQ26_001296"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HCS1856805.1"
                     /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
                     RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL
                     KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL
                     TGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV
                     YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ
                     ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVG
                     VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
     gene            complement(27589..27909)
                     /gene="psiF"
                     /locus_tag="OQQ26_001297"
                     /pseudo
     CDS             complement(27589..27909)
                     /gene="psiF"
                     /locus_tag="OQQ26_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414918.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
     gene            complement(28028..29443)
                     /gene="phoA"
                     /locus_tag="OQQ26_001298"
     CDS             complement(28028..29443)
                     /gene="phoA"
                     /locus_tag="OQQ26_001298"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HCS1856806.1"
                     /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA
                     RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL
                     TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHENDHPTILEMAKA
                     AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL
                     NARADVTLGGGAKTFAETAIAGEWQGKTLREQAQARGYQLVNDAASLNSVTEANQQKP
                     LLGLFADGNMPVRWQGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKSIELLSK
                     NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADH
                     AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN
                     VVGLTDQTDLFYTMKAALGLK"
     gene            complement(29544..29804)
                     /gene="iraP"
                     /locus_tag="OQQ26_001299"
     CDS             complement(29544..29804)
                     /gene="iraP"
                     /locus_tag="OQQ26_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HCS1856807.1"
                     /translation="MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
                     QQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ"
     gene            complement(29986..30188)
                     /locus_tag="OQQ26_001300"
                     /pseudo
     CDS             complement(29986..30188)
                     /locus_tag="OQQ26_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            30266..31360
                     /gene="ddlA"
                     /locus_tag="OQQ26_001301"
     CDS             30266..31360
                     /gene="ddlA"
                     /locus_tag="OQQ26_001301"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HCS1856808.1"
                     /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
                     KQGQWHVSDASNYLLNADDPAHIALRPSATTLAQVPGKHEHQLIDAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
                     LTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
                     IVEQGIKGREIECAILGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
                     EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLITRLIELALERHAADNALKTTM"
     gene            complement(31384..31596)
                     /locus_tag="OQQ26_001302"
     CDS             complement(31384..31596)
                     /locus_tag="OQQ26_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414914.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 domain-containing protein"
                     /protein_id="HCS1856809.1"
                     /translation="MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVG
                     LVTWVISFWLAGLIIRRRDEETENAQ"
     gene            31856..32164
                     /locus_tag="OQQ26_001303"
     CDS             31856..32164
                     /locus_tag="OQQ26_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiY family protein"
                     /protein_id="HCS1856810.1"
                     /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
                     LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLAGCLIFAVVALWLHWRHRRQ
                     "
     gene            complement(32223..33317)
                     /gene="yaiW"
                     /locus_tag="OQQ26_001304"
     CDS             complement(32223..33317)
                     /gene="yaiW"
                     /locus_tag="OQQ26_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HCS1856811.1"
                     /translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
                     KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA
                     WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
                     GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
                     NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
                     LATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
                     QLESPKITRNLTTAWFAKRVDERRARCMKQ"
     gene            complement(33330..34550)
                     /gene="sbmA"
                     /locus_tag="OQQ26_001305"
     CDS             complement(33330..34550)
                     /gene="sbmA"
                     /locus_tag="OQQ26_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HCS1856812.1"
                     /translation="MFKSFFPKPGAFFLLAFVWALIAVIFWQAGGGDWVARITGASGQ
                     IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
                     HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIA
                     FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
                     AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
                     LDGDKIQEVTHTLS"
     gene            34902..36059
                     /gene="ampH"
                     /locus_tag="OQQ26_001306"
     CDS             34902..36059
                     /gene="ampH"
                     /locus_tag="OQQ26_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine-
                     carboxypeptidase/endopeptidase AmpH"
                     /protein_id="HCS1856813.1"
                     /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
                     GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQMDSVVRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPSARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWKYLSTTKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK
                     DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
                     SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF
                     ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
     gene            complement(36060..>36481)
                     /locus_tag="OQQ26_001307"
     CDS             complement(36060..>36481)
                     /locus_tag="OQQ26_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1856814.1"
                     /translation="YIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLW
                     RDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRT
                     RISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY"
BASE COUNT         9106 a         9750 c         8987 g         8638 t
ORIGIN      
        1 caggtcagcg aatgggttgt acttcgcttc accgacatct ttctgcgcat cttcccctgc
       61 gataacggtc gtaccatact gatccgcttc ggtatatttc gaatgctcat gatcgtggca
      121 atagagacaa agcaattccc agttactgcc atcttccggg ttattggtat ggtcgtgatc
      181 aatgtggtga acggtaagtt cacgcaggtt ggaataaaca aactcgcggg aacagcgacc
      241 gcagacccac ggatagattt ttaatgcttt ttcgcgatag ccgctttcta accgcgcata
      301 gttttttggg atgatagcca tgaagagtta cctggatgaa atgtagggtc acgcgcagtt
      361 tcccaagatg cggggatttt cgcaatctcc atacatcaaa aaaaatcccg atcttctgac
      421 cgggattttc aacatcaacg ggaacttgat taaggcagaa ttgacggctg atccgcccct
      481 tctttttcca ctttctgctg caacatgtgt tcgcgcttca tacccagttt cagagccaac
      541 gcagatgcca catagatgga agatgcagta ccgatggaaa caccgataag catggtcagc
      601 gagaagcctt ccagtaccgg accaccgaag aggtacagca tcaggataac catcaaggta
      661 gtaccggatg tgatcaaggt acggtgcagc gtctgggtca aggacacgtt aaagatttcg
      721 taaggcgtac cgcgacggat cttgcggaag ttttcacgaa tacggtccga taccacgata
      781 ctgtcgttaa gcgagtaacc gataaccgac atcaacgatg ccacaatggt caggtcaatc
      841 tcgatatgga ataacgacaa aatacccagc gtaatgataa cgtcgtgcgc cagcgcaata
      901 accacccctg ccgccagtcg ccactcaaag cggaaaccta cgtacacgag gatagacagc
      961 agcgctgcca tcaacgccat cgcaccggtt tgcgcaaggt ctgcccccac gctcggaccg
     1021 acgaactcaa tacgcttcac tgctgcattc tgattggtgg attcgttaat caccttcaga
     1081 acctggctgc ccagcacctg accgccggtt tcgccttcag caggcggcat acggaccatg
     1141 atgtcgtggc tgctaccaaa gttttgcagc atcggctctt caaaaccggc tttttgcaat
     1201 gcatcacgca ttacgtcaat ttcagccggt ttttcgagcg taatttcgat aaccgtacca
     1261 ccggtgaaat ctagccccca gttaaagccg cgcacgccca taataacgat agcagcgatt
     1321 aacagcagac cagagatgcc gaaagcccag tagtcccagc gcataaagtc atagacttta
     1381 cgtccatggt ttagttgttc aacagtatat tcctgtgcca catcgcactc ctcagattga
     1441 cagcttcttg acgcgcttgc cgccatatag caggtttacg atggcacgcg taccgacaat
     1501 cgcggtaaac atcgacgtcg ccacaccgat accggtagta atcgcgaacc ctttaattgc
     1561 cccggtaccc actgcataca ggatgatgac tttaatcagc gtggtgatgt tcgcatcgaa
     1621 gatagaactg aatgcgccac gataaccttc atcaattgcc tgttgaacgg tacgtccgtt
     1681 gctcaactct tctttaatac gttcgttgat cagtacgttc gcatcgaccg ctaccgcaag
     1741 ggttaagacg atacccgcga tacctggcat actcagtgtt gcgcctggca acagcgacat
     1801 aataccgacg atcaagatca agttggcaat cagagcactg gtcgcaatca gaccaaactt
     1861 cttatagaag atgatcatga acagaataga aaccagcaga ccggcaaggc aagcctccag
     1921 cccctgctca atgttctgca tacccagggt cgggccaatt gtacgttctt caacaatctg
     1981 aatcggcgcg atcaacgcac cggcacgcag cagcagtgac agctgacggg cttcgttcgg
     2041 gttgttgatg ccggtgatac ggaagctgtt acccagacga gactggatgt tggcgatgtt
     2101 aatcacctct tcctgtttca ccagaaccgc acgaccattt gcatctttct taccgctgtc
     2161 tttgtactcc acaaacaggg ttgccatcgg tttgccgatg ttgtccttgg tgaagttaga
     2221 cataatgttg ccaccagcgc tatcgagcga gatgttaacc tgcggctggt tgtattcgtc
     2281 ctggctggaa gtggagtcgg tgatatggtc accggtcaga attacgcgtt tgtacagcac
     2341 aaccggctga ccttcgcggg tctgtttcac ttcagagtcg cccggtacgc gaccggatgc
     2401 cgcagcggcc tgatcaacgt tggtgtttac cagacggaat tccagcgttg ccgtcgcacc
     2461 cagaatctct ttcgcacgcg cagtgtcctg aatacctggc agctcaacaa cgatacggtc
     2521 agcaccctga cgctgaacca ccggctccgc cacgccaagt tggtttaccc ggttacgcag
     2581 gatattgatg ttctgctgca ccgcatattc acgcgcttca ctcagacgag catcgctcat
     2641 taccgcacgc agctggttgc tgccctggct actaatcacc aggtccggat ggcgcttgct
     2701 cagatacgca atggcttcat cacgagcttt agcatcgcgg aaagtgatgc tcaggccgta
     2761 gttgttttct ttacgaacgg tggtatacgg gatgcctttt tcacgcagat cgctacgcag
     2821 gctatcgata ttttgttcct ggagtttgcc aagcgcggtg tccatatcca cttccatcag
     2881 gaagtgaacg ccgccacgca ggtcaagacc gagtttcatc ggctcagcat gaatagctgc
     2941 cagccagcgc ggcgttgccg gggcaaggtt aagcgccacg acgtatttgt cacccataac
     3001 gcccattaat gcttcacgag cgcgcagttg ggtgtcagta gagtcgaagc gcgcaagaat
     3061 agcgccctct tccagtgcca cagacttagc agttattttt tcttcttgta acgttttctg
     3121 gacctggatc agcgtttgct cactggcggc gactccgcgc gcaccagtga tctgaacagc
     3181 cggatcctca ccaaacaggt tgggaagcgc atacagcaga ccgatgacaa tcaccacgat
     3241 cagcatgacg tacttccaca aaggataacg gtttaacacg gcaattccct tagggaaaaa
     3301 ttttaattac agcgccttca tggtgccttt cggcaggacg gcagctacga agtcacgttt
     3361 aataactact tcagtggtgt cattcagcgc gatagcaatg tagccgtttt ccgctacttt
     3421 ggttacgcga ccaaccaggc caccgttcgt cagaacttca tcacctttgg caatggagtc
     3481 catcagcttt ttgtgttctt tggtgcgctt ctgctgtgga cgcaggatca tgaaatagaa
     3541 aatcagaccg aataccacca gcatcaaaat caaagacatc gggctacctt gcgccggtgc
     3601 acccgttgcc gctaccgcat cagaaataaa aaagctcatt aaatttccct cattattaat
     3661 attaatcaac gttcaaaggt ggtacttctc gcccctgacg ctggtaaaaa tcagttacga
     3721 agctctctaa tttaccctct tcaatagcct tgcgtaaacc cgccatcaaa cgctggtagt
     3781 aacgaaggtt atgaatggtg ttgagtcgcg cgcctaatat ttcgttgcaa cggtcaagat
     3841 gatgcaagta agcgcgtgaa taattgcgac aggtgtagca atcacactca ggatcgagtg
     3901 ggccagtatc gctcttatac ttcgcattgc ggattttcac cacgccatcg gtcacgaaca
     3961 aatgaccatt tcgggcgttg cgggttggca ttacgcagtc aaacatatcg ataccacgac
     4021 gtacgccttc aaccaggtct tctggtttac caacgcccat caggtaacgc ggtttgtctg
     4081 ccggaatttg cgggcataca tgctccagaa tgcggtgcat atctgctttc ggctcaccca
     4141 cagccagacc gccgacagcg tagccatcaa aaccgatatc taccagacct ttaacagaaa
     4201 tatcacgtaa atcttcgtaa acgctgccct gaatgatacc aaacagcgca tttttgtttc
     4261 cgagactgtc aaaacgctca cgactacgct tcgcccaacg cagagacatc tccatggagc
     4321 gttttgcgta atcccagtca gcaggatacg gcgtacactc atcaaagatc atgacgatat
     4381 ccgaaccaag atcgtactga atctccattg atttttcagg atcgaggaaa atcggatcgc
     4441 cgttgatcgg gttacggaag tgcacgccct gttcggtgat tttacgaata tcgccaaggc
     4501 tgaagacctg gaagccgccg gagtcggtga ggatcggccc cttccactgc ataaaatcgt
     4561 gcagatcgcc gtgcagtttc atgatttcct ggcccgggcg cagccacagg tggaaggtgt
     4621 tgccgaggat aatttgcgcg ccagtggctt caacttcttc cggcgtcatc ccttttacgg
     4681 tgccgtaggt gccaacaggc ataaaacaag gcgtttccac tacgccacga tcaaagacca
     4741 ggcggccacg gcgtgcgcga ccgtcggtgg tgtccagttc aaatttcatt ttttctccac
     4801 tacgtcagaa aaacagtcca acgtttaaac cagcgccgcg gaattactcc ccgacgcgct
     4861 cattaattgc ctgcggattg tacgtgataa acatcgcatc accgtaacta aaaaagcgat
     4921 atttctcttc taccgccgct ttataggcat tcatggtgtg ttgataaccg gcaaaggccg
     4981 aaaccagcat aatcagcgtc gactctggca agtggaagtt tgtcaccagc gcatcgatca
     5041 ctttgtactg gaagcccgga tagataaaga tttgggtatc gtcgaagaac ggttcaatga
     5101 gatcgttttt cgctgcctga gccgcgcttt ccagcgaacg tactgaggtg gtgccaaccg
     5161 caatcacccg gttaccgcgc gctttcgccg ccagtaccgc gtctaccaca tcctgcggca
     5221 cttcagcgta ttccgagtgc atgatgtgat cttcaatggt gtcgacgcgc accggctgga
     5281 aggtgcccgc accaacgtgc aacgtcacaa acgccatctc cacgcctttg gcgcgtaatt
     5341 tttccagcaa aggttcgtca aaatgcagac ctgcggtcgg ggctgcaacc gcgcccggtt
     5401 tttcgctata aacggtttga taaagttcgc ggtcagcgtc ttcgtccgga cggtcgatat
     5461 acggcggcag tggcatatgg ccgatgctgt tgaggatatc cagcaccgaa cgatcatcat
     5521 taaattcgac ttcaaacagt gcgccgtggc gcgcggtcat tgttgcgttg atactttcgt
     5581 catcgcccag cagcagttct gctccaggtt ttggcgcttt cgaggcgcga atatgcgcaa
     5641 gaatgcgttt gtcgtcgagc atccgctcaa ccagcacttc aatcttgccg ccgctggctt
     5701 tacgcccaaa caggcgcgcc gggatcacgc gagtattatt aaaaaccaga agatctccgg
     5761 ggttgagctt atcgagtaaa tcggtgaaag taccgtgcgt cagcgcgccc gtcggcccgt
     5821 ccagcgacag taaacgacag ctactgcgtt caggcatggg gtagtgggca atcagggatt
     5881 cgggcaattc aaaggagaaa tcggtaacgc gcatgacact gactcagact aaaataagag
     5941 gcgggtagtc tagtgccggg gcgctctccc tgcaaccttt cccccctttt ggatagaata
     6001 taatcgatga attttttagc acacctgcat ttagcccatc tcgcggaaag ctcgctttcc
     6061 ggcaatttac tggctgattt cgtacgcgga aatcctgaag aaagttttcc gcccgacgtc
     6121 gtggctggca ttcatatgca tcgacgtatc gacgtgttaa ccgacaatct gccggaagtc
     6181 cgcgaagcac gggaatggtt tcgtagtgaa actcgccgcg ttgcgcctat taccctggat
     6241 gtcatgtggg atcactttct ttcccgccac tggtcgcagc tgtcgccgga ctttccgcta
     6301 caggaatttg tctgttatgc ccgcgagcaa gtgataacga ttttgccaga ctcaccgcca
     6361 cgctttatca atctgaacaa ttacttgtgg tcagagcaat ggctggtgcg ctatcgcgat
     6421 atggatttca tccagaacgt gttaaacggc atggcaagcc gccgcccacg tctggatgcc
     6481 ctgcgtgact cctggtacga tttagacgct cattatgacg ccctcgaaac ccgcttctgg
     6541 cagttttatc cgcggatgat ggcgcaggcg tcacacaagg cgttataaaa cgttagttca
     6601 tccataccgt agccgaaatg gcaggcaaag ccagaatccc gtcagtcagt tgcccatgcc
     6661 cttctttgca ttgccattgc acggcattaa gcaacggtga cgcgggtagc accacttcac
     6721 aggcctcgcc acggttgatt gccaccagta cacgctgttg attcagcacg cggacaaata
     6781 ccaccacgtt atcttccgca tacagcacct gacagccacc acgacgcagc gcctgacttt
     6841 tcttacgcag cgcaatcatt cgctggtaca gcgcgaataa cgccgtatcc tgcttttcca
     6901 cctgccaagg gaacggttta cggcaaaacg gatcgttttt accatccagt cccacttcat
     6961 caccgtaata aatgcacggt acaccaggcc aggtgaacag ccagaccacc gccagcggca
     7021 ggcgcgcaat atcccgaccg agcagcgttt taaatcgcgc agtatcgtgg ctatcgagct
     7081 gattaaacat acgtaattgt tgttgatgag aaagccctgc gcggtaatta tccatccagg
     7141 ccatacaggt ttgggcgtca atttgctgcg gatcataaga gatatcggta ttggcgagaa
     7201 atccccacaa cgggaatgtg aagccgcgat agttcatggc ggcatcttcc acatcggcct
     7261 gtaaccattg ccgtgcatcg ccaaaatgtt cgccgacaat atacgcttcc ggctgggttt
     7321 ctttcgccgc ttcggtgatc ccggcaacgt gttgcatatt attgcgcgcc ccacccgcct
     7381 cccccagcat atgcaccaca tccagccgcc agccgtccat actccacggc gctttcagcc
     7441 aatggcggac aatactgtct tccccgcgat aaatttcatt caccagactt tccgactgat
     7501 aatccagctt cggcaagctg gcatagccca gccagtcgag cgccgtgcca tcatcactaa
     7561 acgagtacca gtcgcgccag ggcgattcgg ggttgtgaca agctcccccc gtgccaagat
     7621 tgtgcctgtc aaaccaggca tgggaatcgc cactgtggtt aaacacgccg tccagcacca
     7681 gccgcattcc cagctgctgc gtattgtgtc gcaaacgcag caacgcccca tcaccgccaa
     7741 actgcggatc gacatggcga taatcctcgg tatcgtattt atgtacgctg ggagctttaa
     7801 acaccggatt gagatacagc gctgtcacgc caagcttttt cagatacggc agtttttcgc
     7861 ttatcccgtc cagatcgccg ccatagaacg ttgatccgcc cgcctgcgcc gtgaccggtt
     7921 catcccagtc acgcaagatg atctcttgtc cggcggcatg atggtaatag acatgatcct
     7981 gttcagcttc acgaggaaga ctacgcgcaa aacgatcagg gaagatctga taaaaaatct
     8041 gatccgcagc ccattgtggg ccgatatccg gtacatcgac ggcaaactgc tccagtcgtg
     8101 ccggcggcat tcggctgaag ccctgcggtg taaaccaacg ctggcgatcg tgccgcagca
     8161 gtttgaaact gtaacgccgc cggggttgtc cgctggagag atcaatcgcc gcacgccatg
     8221 cggtgacgcc tggctgcggc tgactgcgct gcttatgcat tggtactgac atttcttcgt
     8281 tatcgtgttc tgtacgcagc ataatgcgct gcggtgggtc ttcgcccgtc agccacagtg
     8341 taatgagcag ttgatctttg ctttgtttaa caaatggggg caccggcagg tgccatgcat
     8401 ttaacatcat aattcccctg tgatgaaaat ctgatcacct tgccatagcc taatgcagga
     8461 tcactcatca tctgaaggat atttggggga ggaggacggg ggcggataac tttcggaata
     8521 gccggatcag gatttcctcc tgaaccggct tacagaacgc aagtattatt ggttttcagc
     8581 cagctgacga tcgtggcggc gtttaaacat ccagccaatc aacagcacaa caatccacgc
     8641 gaaaccgaca tacagcgaga tacgcgtatc cgggtgataa ccaatcaacc cgataataaa
     8701 gagcaggaaa atcagcccgc cgatggtcgt tgctacccca cccggcactt taaatttcag
     8761 cgccttaact tcttctggcg gcaaacggcg acggaaggcg atttgcgaca gcaggatcat
     8821 aatccacacc cataccgtgg cgaaggttgc cagcgaagcg atcaccaaga agacgttttc
     8881 cggcatgatg tagttcagat acaccgcaaa cagcagcgcg gtagtcatca ccagcaccgt
     8941 aacccacgga ataccgcgac gcgacgtttt gctgaaaatt ttcggtgcgc tgccctgctc
     9001 tgccataccg tggagcatac ggcctacgcc aaatacgtca ctgttaattg ccgacagcga
     9061 agcggtcagc acaacaaagt taagaatgct ggcggcaaag gtaatgccca tatgctggaa
     9121 cgtcagcacg aacgggctac cggcagtgcc aacctgattc cacgggtaga tagacataat
     9181 aacgaacagc gtaccgacgt agaacaccag aatacgcatc ggcacggagt taatcgcacg
     9241 cggaatcgat ttctcaggat ctttcgcttc accggcggta atcccgataa tttcgatccc
     9301 accgtaagca aacatcacca tttgcaacga cattaccatg ccaagccagc cgttactgaa
     9361 gaagccgccg ttgctccaca ggttatgaat cccggtcggt tgcccgccgt tgccaatccc
     9421 ccagatgatg atgccgaaac cggcgacaat catgatgatg atggtggcga ctttaaagaa
     9481 cgagaaccag aattccagct caccgaatac cttcacgctc atcaggttta cggcgcaaat
     9541 gatcagcacc acgctcagta cccaaatcca gtgcggcacc gtcgggaacc agacacccat
     9601 atagatacca aaagcggtca catcggcgat ggcgacaatt aggatttcaa agcagtaggt
     9661 ccagccggta atgtaacctg ccagcgggcc gaggttttcc tgcgcataac gcgagaaaga
     9721 gctggcggcc gggttatgta ccgacatttc ccccagcgca cgcataatga tatacgccgc
     9781 gataccaccg ataatatagg ccaacaacac gctcggaccg gccattttga tggcatctgc
     9841 cgaaccgtaa aacaacccgg tgccaattgc tgaacccagt gccataaagc gtatgtggcg
     9901 ggtacttagc ccacgcttta gcttgttctt actttccatc aattcctaac ccatcaacac
     9961 aataaaaaac cacggggcat cgcagccccg tggttaaaac aaatgttcag tgatttagtg
    10021 agcgctggag gtcacctgac gacctgccgc gcgatcccag ataatggcca gaaccaccat
    10081 caccactgtt ggcattaacc acgccagacc ttgttcggcc agcggtaaac gctgcgccca
    10141 ggacggtaag atatcgctga atgcagatgc tttgatcccg tcgagaatac caaaaagcag
    10201 gctgataaac atcggcggag caatcacgcg ggacgaatta tgccaccatg agcgtgtaaa
    10261 acttaataca accagtgcga tacacggcgg ataaatagcg gtcagcaccg gtacggagat
    10321 ctgaatcagc tggctcaagc cgaggttaga caccaccatc gagaagccac cgaggataaa
    10381 caccagcgta cgataagaga gcggtacgta ctgggcgaag aattctgcac aagcacaggt
    10441 caggccaacc gccgtgacca gacaggcgat gaagattaac gccgccagca ggaagctacc
    10501 gccgccgcca aaggtgtgct gaacgtaagc atgcagaata gcagcgccgt ttgcagactg
    10561 ctcgaccagc gacgcgctgt ctgaacccag acggaacagc gccaggtaca gtagagtcag
    10621 accaacaccc gccatcaggc cagcccagac ggtataacgg gtcagcagac gcgcttcggt
    10681 aacgccacga gaacgcgccg cgttaacaat aacgatacca aacaccattg cgcccagcgt
    10741 atccatggtc agatagccgt tgacgaagcc gttagaaaac gcagcgtttt gataagcctc
    10801 agtcgccgtg ctgatagaac ccgccggcca gacaatcgcg gcaacagaca ggatgaccag
    10861 cgcgataatt ttcagcggcg caaggaagtt gcccacggta tccagcagct tgcccggata
    10921 gagcgaaacc agaataacga tagcgaaata gaccaggctg tagataaaca gcggcagcgc
    10981 ggaatctccc gtcagcggcg caatccccac ttcaaaagaa acggtagctg tacgcggcgt
    11041 agcgaaaagg ggccccaccg ccaggtaaca aaccgttgcc agcagtacgc cagcgacttt
    11101 accgattggc gtgctgaggc tgtcaacacc gccgccaact tttgccagcg ccactaccgt
    11161 taataccggc agaccaacgg cagtaatgag gaagccgaat gccgcagtcc agacgtgttc
    11221 gcctgcctgc aagccgacca ttggagggaa aataatgtta cctgcgccga cgaacaacgc
    11281 aaatgtcata aagcccagag cgatgatatc gcgcgatctt aattgatggg tcataaatca
    11341 tactgcctgt ggatgtggtg ttgtaacgtt aaatttttgt gccaatccct ggggatgata
    11401 cagcggtata tttaaacaat tttagcggga aatactccca accaggcgcg gcgaagaata
    11461 gttttcgatt taccgcgtta atgcagtcag tatgacagca cctgaagcgc aatttaaacg
    11521 cttataacgt tttaaagcaa ggagggatct aaaaaccaga ggtatatagc gataagaaat
    11581 taccaaccag tataaaacac tatttccgtg aaaaagacat ggctaatcat gcgaacaaaa
    11641 aatcaccaac cgttgtaaaa tctaacgccc gtattttgac tgcaaagaaa ataagccagc
    11701 atcggctggc ttatggcaat aaaagatgac aaaggcggat taatcgctgt ttttggcaat
    11761 taaacgttcc gggataacaa aactgaaacg tgttcctttt cctactgtac tctcaatatt
    11821 caggcgactt tcgtgatgat tcaccgcatg tttcacgatc gctaacccta atccgctacc
    11881 gccggtttgc cgggaacgcg ctttatcaac gcgataaaaa cgctcggtca ggcgcggaat
    11941 atgctccggt gcaatgcccg gtccgttatc ttcaacgcta aattcggcac cgtgcggcac
    12001 tcgctgccag cgtacggtga tatgcgtgcc ttccggcgta tgattcacgg cgttatagac
    12061 caggttcgaa atcgcactgc gtagctgatc ttcgttgcca gacaccttga ggccgttatc
    12121 tatctcaaag gtaaatgtct gttttttctg actcagagtc tgagcctcgc gctcaacaac
    12181 gcgcagcatc atcggcacat caaccttttc attgagcaaa tgcgtcggtg cggcttctat
    12241 tttcgacagc gtcagcaatt gcttcaccag cccttccatc cgctgggtct gctcgcgcat
    12301 ggtgtgcaac gctttttcgc gtaccgcgcc ttccagcggc tgctcatcca tcatctccag
    12361 gtaaccctgt aacacggtca atggcgtacg taactcatgg ctcacgttgg caaaaaagtt
    12421 acgccgcgcc ccttccagtt gatgcatttg cgtgacatca cgcgccacca tcagcaactg
    12481 tttgtgggta taaggcatga cgcgaatttc cagatgccgc ccggtgttga gcaccagatt
    12541 gagcgggcga gaaaaatcac gcgttttcag atattgcgta aactccgggt aacgcagcag
    12601 gttaaggatg ttctgcccgt tatcttccgg ccagcgcaaa ccaagaatct gttgcgccag
    12661 accgttacac cagaaaatac cgccctcttc cgtggtcagc accactgcgt cgggtagcga
    12721 ctccgcgccg ctacgaaagc gtttaatcag attgcccagt tcacggcggc gttttttatt
    12781 tcgcagctgc atctggtgta agccgtatag tagcggttcc cagctaccac gccccggtgg
    12841 cggggtcata ctacgatcca cccacagcca ccatgaaagg cgcaataaat tccagaaatg
    12901 ccagataagc agtcccgtta ccgatgccag caaaaaccag ggcaggtaac caaaaaatgc
    12961 acccaggatg aaagccggga ggcagcaaag tagcagctcc agcaccagcc ttttccacga
    13021 cagccgttcc agcacgtaag atactccagt taagaaatca taagccctgc tctgcgtccg
    13081 atgagcaagg cgttaaaagc gggttgaaaa acgatatcct gtaccgcgca cggtctgcac
    13141 catgcggtca tgcccgccgg gctccagtgc tttacgcagg cgacgaatgt ggacatcgac
    13201 cgtgcggtct tccacataca cgttagttcc ccagacgtgg tttaacagct gctcgcggct
    13261 gtacacgcgc tcaggatgcg tcataaaaaa gtgcagcagt ttaaattctg tcggccccat
    13321 ctccagcggc tcttcgcccg ccatcactcg gtgagatgtc gggtcgagac ttaatccctg
    13381 catctcaatc atctcttcca ccgccattgg cgaaatacgg cgcattaccg ctttgattcg
    13441 cgccaccagc tccttcggcg aaaacggctt ggtgatatag tcatccgcgc cggtttcaag
    13501 gccgcgcacg cgatcttctt cttcccctct ggcggtcaac atcaccactg gaatatcccg
    13561 ggtcatcgac tcgcgcttga ggtgtttgat gaactggata ccggagccgc caggtaacat
    13621 ccagtcaagg agaattaaat ccggccaggg gtcattcagt tgattcacag cactgtcata
    13681 atcttccgct tcgaccggct gaaagccatt ttgttcgagc acgaagcaga ccatttcgcg
    13741 aattggagct tcatcttcta cgaccagaat acgtctcgcc atgatttgcc ctgttgtaat
    13801 aaataggttg cgatcattaa tgcgacgtca ttatgcgtca gatttatgac agatttatga
    13861 aaagctcgtc gcacatatct tcaggttatt gatttccgtg gcgcagaaaa aagcaaatgg
    13921 cacatctgtt tgggtataat cgcgcccatg ctttttcgcc agggaaccgt tatgcgcatt
    13981 cttcacacct cagactggca tctcggccag aacttctaca gtaaaagccg cgaagctgaa
    14041 catcaggctt ttcttgactg gctgctggaa acagcacaaa cccatcaggt ggatgcgatt
    14101 attgttgctg gtgatgtttt cgataccggc tcgccgccca gttacgcccg cacgttatac
    14161 aaccgttttg ttgtcaattt acagcaaact ggctgtcatc tggtggtact ggcaggaaac
    14221 catgactcgg tcgccacgct gaatgaatcg cgcgatatca tggcgttcct caatactacc
    14281 gtggtcgcca gcgccagaca tgcgccgcaa atcttgcctc gtcgcgacgg gacgccaggc
    14341 gctgtgctgt gccccattcc gtttttacgt ccgcgtgaca ttattaccag ccaggcgggg
    14401 cttaacggta ttgaaaaaca gcagcattta ctggcagcga ttaccgatta ttaccaacaa
    14461 cactatgccg atgcctgcaa actgcgcggc gatcagcctc tgcccatcat cgccacggga
    14521 catttaacga ccgtgggggc cagtaaaagt gacgccgtgc gtgacattta tattggcacg
    14581 ctggacgcgt ttccggcaca aaactttcca ccagccgact acatcgcgct cgggcatatt
    14641 caccgcgcac agattattgg cggcatggaa catgttcgct attgcggttc ccccattcca
    14701 ctgagttttg atgaatgcgg aaagagtaaa tatgtccatc tggtgacatt ttcaaacggc
    14761 aaattagaga gcgtggaaaa cctgaacgta ccggtaacgc aacccatggc ggtgctgaaa
    14821 ggcgatctgg cgtcgattac cgcacagttg gaacagtggc gcgatgtatc accggagccg
    14881 cctgtctggc tggatatcga aatcactact gatgagtatc tgcatgatat tcagcgcaaa
    14941 atccaggcat taaccgaatc attgcctgtc gaagtattgc tggtacgtcg gagtcgtgaa
    15001 cagcgcgagc gtgtgttagc cagccaacag cgtgaaaccc tcagcgaact cagcgtcgaa
    15061 gaggtgttca atcgccgtct ggcactggaa gaactggatg aatcgcagca gcaacgtctg
    15121 cagcatcttt tcgccacgac gttgcatagc ctcgccggag aacacgaagc atgaaaattc
    15181 tcagcctgcg cctgaaaaac ctgaactcat taaaaggcga atggaagatt gatttcaccc
    15241 gcgagccgtt cgccagcaac gggctgtttg ccattaccgg cccaaccggt gcggggaaaa
    15301 ccaccctgct ggacgccatt tgtctggcgc tatatcacga aactccgcgt ctatctaacg
    15361 tttcacaatc gcaaaatgat ctcatgaccc gcgataccgc tgaatgtctg gcggaggtgg
    15421 agtttgaagt gaaaggtgaa gcgtatcgcg cgttctggag ccagaatcgg gcgcgtaacc
    15481 agccggacgg taatttgcag gtgcctcgca tagagctggc gcgctgcgcc gacggcaaaa
    15541 ttctcgccga caaagtgaaa gataagctag aactgacagc gacgttaacc gggctggatt
    15601 acgggcgctt cacccgttcg atgctgcttt cgcaggggca atttgctgcc ttcctgaatg
    15661 ccaaacccaa agaacgcgcg gaattgctcg aggagttaac cggcactgaa atctacgggc
    15721 aaatctcggc gatggttttt gagcagcaca aatcggcccg cactgagctg gagaagctgc
    15781 aagtgcaggc cagcggcgtc gcgttgctca cgccggaaca agtgcaatcg ctgacagcga
    15841 gtttgcaggt acttactgac gaagaaaaac agttacttac cgcgcagcag caagaacaac
    15901 aatcactaaa ctggttaacg cgtctggacg aattgcagca agaagccagc ctccgtcagc
    15961 aggccttgca acaggcgtta gccgaagaag aaaaagcgca acctcaactg gcggcgctca
    16021 gtctggcaca accggcacga aatcttcgtc cgcactggga acgcatcgca gaacacagcg
    16081 cggcgctggc gcatattcgc cagcagattg aagaagtaaa tactcgctta cagagcacaa
    16141 tggcgcttcg cgcgagcatt cgccaccacg cggcgaagca gtcagcagaa ttacagcagc
    16201 agcaacaaag cctgaatacc tggttacagg aacacgaccg cttccgtcag tggaacaacg
    16261 aactggcggg ttggcgtgcg cagttctccc aacaaaccag cgatcgcgag catctgcggc
    16321 aatggcagca acagttaacc catgctgagc aaaaacttaa tacgcttgcg gcgatcacgt
    16381 tgacgttaac cgccgatgaa gttgctagcg ccctggcgca acattccgag caacgcccac
    16441 tgcgtcagcg cctggtcgcg ctgcatgggc agattgttcc ccaacaaaaa cgtctggcgc
    16501 agttaatggt cactatccag aatgtcactc tggaacagac gcaacgtaat gccgcactta
    16561 acgaaatgcg ccagcgttat aaagaaaaga cgcagcaact tgccgatgtg aaaaccattt
    16621 gcgagcagga agcgcgcatc aaaacgctgg aagcccagcg tgcacagtta caggcgggtc
    16681 agccttgtcc actttgtggt tccaccagcc acccggcggt cgaggcgtat caggcgctgg
    16741 agcctggtgt taatcagtct cgattactgg cgctggaaaa cgaagttaaa aagctcggcg
    16801 aagaaggtgc ggcgctgcgc gggcaactgg atgcattaac gaagcagctt cagcgcgatg
    16861 aaaacgaagc gcaaagcctc cgacaagatg agcaagcact tactcaacaa tggcaagccg
    16921 tcacggccag cctcaatatc accttgcagc cacaggacga tattcaaccg tggctggatg
    16981 cacaagatga gcacgaacgc cagttgcggt tactccgcca acggcatgaa ttacaagggc
    17041 agattgccgc gcataatcag caaattatcc agtatcaaca gcaaattgaa caacgccagc
    17101 agcagctctt aacggcattg gcaggttatg cactgacatt gccacaggaa gatgaagaag
    17161 agagctggtt ggcgacacgt cagcaagaag cgcagagctg gcagcaacgc cagaacgaat
    17221 taaccgcgct gcaaaaccgt attcagcagc tgacgccgat tctggaaacg ttgccgcaaa
    17281 gtgatgatct cccgcacagc gaagaaactg tggcgctgga taactggcgg caggttcatg
    17341 aacaatgtct cgcattacac agccagcagc agacgttaca gcaacaggat gttctggcgg
    17401 cgcaaagtct gcaaaaagcc caggcgcagt ttgacaccgc gctacaggcc agcgtctttg
    17461 acgatcagca ggcgttcctt gcggcgctaa tggatgaaca aacactaacg cagctggaac
    17521 agctcaagca gaatctggaa aaccagcgcc gtcaggcgca aacgctggtc actcagacag
    17581 cagaaacgct ggcacagcat caacaacacc gacctgacgg ggtggctctc actgtgacgg
    17641 tggagcagat tcagcaagag ttagcacaaa ctcaccaaaa gttgcgtgaa aacaccacga
    17701 gtcaaggcga gattcgccag cagctgaagc aggatgcaga taaccgtcag caacaacaaa
    17761 ccttaatgca gcaaattgct caaatgacgc agcaggttga ggactgggga tatctgaatt
    17821 cgctaatagg ttccaaagag ggcgataaat tccgcaagtt tgcccagggg ctgacgctag
    17881 ataatttagt ccatctcgct aatcagcaac ttacccggct gcacgggcgc tatctgttac
    17941 agcgcaaagc cagcgaggcg ctggaagtcg aggttgttga tacctggcag gcagatgcgg
    18001 tacgcgatac ccgtaccctt tccggcggcg aaagtttcct cgttagtctg gcgctggcgc
    18061 tggcgctttc ggatctggtc agccataaaa cacgtattga ctcgctgttc cttgatgaag
    18121 gttttggcac gctggatagc gaaacgctgg ataccgccct tgatgcgctg gatgccctga
    18181 acgccagtgg caaaaccatc ggtgtgatta gccacgtaga agcgatgaaa gagcgtattc
    18241 cggtgcagat caaagtgaaa aagatcaacg gcctgggcta cagcaaactg gaaagtacgt
    18301 ttgcagtgaa ataactattc agcaggataa tgaatacaga ggggcgaatt atctcttggc
    18361 cttgctggtc gttatcctgc aagctatcac tttattggct acggtgattg gtagccgttc
    18421 tggtggttgt gatggtggta tgaaaaaagt cattttatct ttggctctgg gcacgtttgg
    18481 tttggggatg gccgaatttg gcattatggg cgtgctcacg gagctggcgc ataacgtagg
    18541 aatttcgatt cctgccgccg ggcatatgat ctcgtattat gcgctggggg tggtggtcgg
    18601 tgcgccaatc atcgccctct tttccagccg ctactcactc aaacatatct tattgtttct
    18661 ggtggcgttg tgtgtcattg gcaacgccat gttcacgctc tcttcgtctt acctgatgct
    18721 tgccattggt cgcctggttt ccggctttcc gcatggcgca ttttttggcg tcggagcgat
    18781 cgtgttatca aaaattatca aacccggaaa agtcaccgcc gccgtggcgg ggatggtttc
    18841 cgggatgaca gtcgccaatt tgctgggcat tccgctggga acgtatttaa gtcaggaatt
    18901 tagctggcgt tacacctttt tattgatcgc tgtttttaat attgcggtga tggcatcggt
    18961 ctatttttgg gtgccggata ttcgcgacga ggcgaaagga aagctgcgcg aacaatttca
    19021 ctttttgcgc agcccggccc cgtggttaat tttcgccgcc accatgtttg gcaacgcagg
    19081 tgtgtttgcc tggttcagct acgtaaagcc atacatgatg tttatttccg gtttttcgga
    19141 aacggcgatg acctttatta tgatgttagt ggggctaggg atggtgctag gaaatatgct
    19201 aagtggcagg atttcaggac gttattcacc actgcgcatt gcagcagtaa ctgactttat
    19261 cattgtactg gcactgctga tgctcttttt ctgcggcggc atgaaaacaa cgtcgcttat
    19321 ttttgctttt atttgttgcg cgggattatt tgccctttca gcacctctgc aaatattgtt
    19381 actgcaaaat gccaaaggcg gagagttatt aggtgccgca ggtgggcaaa tagcgtttaa
    19441 cctcggtagc gccgtcggcg catattgcgg tggtatgatg ctgacgctgg ggctggcata
    19501 taattacgtg gcgctgcctg ccgccctgct ttcgtttgct gcgatgtcat cgttgctgct
    19561 gtatggtcgc tataagcgcc agcaagcagc ggatagtccg gtgctggcga aaccactggg
    19621 gtagattact gtcacagtgc gcgttgctta ttgccggatg cggcgtgaac gccttatccg
    19681 ccctacgcgg ttctggcaca ttttgcaggc ctgataagac gcggcaagcg tcgcatcagg
    19741 catgatgagc caattgcctg gttttttact cttatggcca taaccatgca gcgccgcgta
    19801 cgccgctgga atcaccgtgc ttcgccttac gcaccggcgt ttcacattcg ccgccgaaga
    19861 caaattgttt aatcaactgc ggaaccgttt gatataaacg gtctacattg ctcatcccgc
    19921 ctcccaggac aatcacatcc ggatcgagaa tattcacgac atgtgccagc gattttgcca
    19981 gccgcagctc gtagcgacgc aatgccagtt ccgctaccgg atcgctttct tcaaccaggc
    20041 tgataatttc actgcctttc agcgcatgtc cgctcaaacg acgataatcc gtcgcgaatc
    20101 ccgtgcccga aataaaggtt tcaatacaac cttgtttacc gcaataacaa gggacttcct
    20161 cgcgataacg cagttcgtct tcgtccatcc acggtagcgg attgtgtccc cactcacctg
    20221 ccgtgccatt gccgccgata tgcgcccgcc cattgaatgc cacgcccgcg ccgcatcccg
    20281 tgccgataat cacggcaaat accgtctgtg ctcccgctgc cgcgccatct actgcttctg
    20341 aaacggccag acagttggcg tcatttgcca gccgcacttc ccgctgcaac cgcgcgctta
    20401 agtctttatc gaatggctga ccgttgagcc aggttgaatt ggcatttttc accacgccgg
    20461 tgtaaggcga aattgcgcca ggaatgccca tacctaccgt tccgcgctgc cctgtcgcct
    20521 gctccgccat atcaaccaac gtggcgatcg tttcaatagt ctgccggtaa tcatcacgcg
    20581 gcgtgggcag acgatggcgg tacaactgct cccctgcatc gcccagtgca atcacttcag
    20641 ttttggtgcc gcctaaatcg atacctatac gcacggtact ctccttattt ttttcaatat
    20701 caatagcgta gagacggaca accggattgg caatgcaagg ccgccgacaa ttcgttatca
    20761 tgcccgctaa atttaacgac aaggccgtgg aaattatcat gctgtggttc aaaaatttaa
    20821 tggtttaccg tcttagccgc gagatttcgc tgcgtgcaga agagatggaa aaacagctag
    20881 cctcgatggc atttacccca tgcggcagcc aggacatggc gaagatgggc tgggttcctc
    20941 cgatgggatc gcacagcgat gcgttaacgc acgttgccaa tggtcaaatt gttatctgcg
    21001 cgcgcaaaga agaaaaaatc ctcccgtctc cggtgattaa acaggcgctg gaagcgaaaa
    21061 tcgccaaact ggaagcggaa caggcgcgta agctgaagaa aaccgaaaaa gattcgctga
    21121 aagacgaagt gctgcactct ctgctgccgc gtgctttcag ccgttttagc cagacaatga
    21181 tgtggatcga cacggttaac ggtttgatta tggtggactg cgccagtgcc aaaaaagcgg
    21241 aagatacgct ggcattactg cgtaaaagcc tggggtcgtt accggttgta ccattgagca
    21301 tggaaaaccc gattgaactg acgctgaccg aatgggttcg ctccggtagt gcggcacagg
    21361 gcttccagct gcttgatgaa gccgagctga aatcgttgct ggaagatggc ggcgtgatcc
    21421 gcgcgaagaa acaagatctg accagcgaag agatcaccaa ccacatcgaa gccggaaaag
    21481 tggtgactaa actggcgctc gactggcagc agcgcattca gtttgtgatg tgcgacgatg
    21541 gttcgctcaa gcgtctgaag ttctgcgacg agctgcgcga tcaaaacgaa gatatcgacc
    21601 gtgaagattt cgcccagcgt tttgatgccg atttcatcct gatgactggt gaactggcag
    21661 cgttaattca aaacctgatt gaaggattag gtggcgaagc acaacgttaa ttgctgattt
    21721 tcctttaatg ccggatgcga cgcctgccgc gtcttatccg gcgtacgaag ccacaccaag
    21781 catataatta ttcgctacgg cgggcaataa tttttagcgc agcaatatta tgcgttttac
    21841 gccgtaactg atctaatcgc ctcatcccta ttcgcctgtc agcagcacgc agaatattca
    21901 ctaaccccca tttatcgctg gtaaattgtt ttgttaacaa ctccgctttt ggggtgtcaa
    21961 tatattcacg caataaatca gaaattgaac aaatatccgt caggtaagga taccagcaag
    22021 tttcaccgtg aaaattacgc actccaccgt tacctgcaat aaagtctttc gggtaatccc
    22081 agatcacgtt tttatccaac gtgatccaat aacgcggtaa atcggtactt ccaccatttt
    22141 ggctgcgcat gggataacgg gtacagtgaa tttgcaggtt gatcgttggc gtcagtaagt
    22201 catagatctc ccgctgtaac ttgctccatg gacgttgtgt cattgttttt cctcaagccg
    22261 gtgacgcgct tcactgcgaa ttttccgcgt tgccccggtt ttcacttaat cacgtaacag
    22321 cgaaagatcg ggttgttcga caaataagag taatgatgga tcctctttta accacgccgt
    22381 tttcacatcg gcagccagct gtggattatt aatagccagc gaccgttcct gaggctcagt
    22441 caatgtcgtt aacaacgacg ccggggtatg tgcgttgcgc aatgccgttt ggcgcaaatg
    22501 atcattgcga ctttgcagca aagcacgcca tcattcatca tctgatttat cttttatcgt
    22561 agccagttcc gcaacaatat ctggagatct tcactgatat ttatatcaac cttgataaat
    22621 tatgaatata tcggaaattg aaaaaatcgc agcaaaggaa atattattat gggttaaaga
    22681 aaggatattt cagaaaaatg ccctcccgtt caaggggaag gcgaggaatt acagatagcg
    22741 gcacagataa gaggtgggtt cggcaacttg cagatgaaac tcactgtgac cgggaacatt
    22801 aaacaccgaa ccggcttcat acacctgcca gtcggtcgcg tcaggcagta acacattcag
    22861 cgcgccactg attaccgtca tctcttccgg ctcagcggtg ctgaaggtgt attcgccttc
    22921 aaccataaca cccacgctgg cgcgaccagt gctgctgctg gaaaagccga ttgatttcac
    22981 tttgccggaa aagtactcat tactttgaag cataaactgg ccctgtttgg tagttgaaca
    23041 tctacttcac tataggggcc agaggcgctg actgtcacgc aaaattacac cagtaattcc
    23101 gcagccagcc gtgcaatcaa tacgttagac agcaagacag gaacatcgag ctgtttttgc
    23161 agtaaatcgc gatgacgttg gtgaaatcct aaacaatcca gcatgatgac atcagcccct
    23221 tttgccagta attctttccc ggcatcaatg attttttgtt ctgaatcatg aatggggtta
    23281 cccaatgaaa ataccggcga tttctgcaaa atttgccatt tttgcgcctg aacgggcagc
    23341 atctcctcaa ccggaacgat aacccccacc tgatgatctt caacaataga ggaaaccagt
    23401 ggaggcaata ttcgcgacgg ctcaagaaag atcgtattac gcgcagtcat actactaatg
    23461 tttgctgtac tcattaataa aatgacgtca taaccctgat tatcgagcac ttcaaccaca
    23521 ccttgcaggt ctcgctccac tttacgacgc gaaacatggg ccagctggtt gtcatttaat
    23581 aatgtgagaa tggtgtcttc gcctgcttct ggcgcgtact ccgccatcac ttcttcacga
    23641 cttaacttcc ccagcaggct atgatgggaa atattatctt cgtcaatgta ttccgtcagg
    23701 agcggcaaaa cttcctgcat aggtacaatg ccgatggtca ggatcgccaa cgacgcactc
    23761 attgttcatc caccttactt ttctttcgtc gttaattacc gggcaagtgt gaagcaccac
    23821 tgctgacact tacttgtgct acaaatgaca aaaagcgtag cagcagacgt gcacggcata
    23881 atgtaaagat tccaaatgac tccagtaatg gattgttatt gtttaatatt ctaattatta
    23941 gaaaaacatg aattatgaaa aatgtgacgc agatcccttg tagtggcact cagaatccct
    24001 tccgagcagt ctaatgcggt cactctttgt cagggtcctc atagcgtttt ttcgcatcca
    24061 tcgcttcctg agcggtcgga tgttcactga tcaacgagtc tggtttagga tgatcggctc
    24121 tgagttggta ccaggttacc gtctgtcctg gctttccttt ttcaatcgtc actatatatg
    24181 cttcacgagg ataaggcggt ttcgttggca tcgttcttcc ttatttcacg ggatgaacgt
    24241 taagtatagg cgctctaaaa tcaacaattg atcgtctgtg ccagggcgct acgaatttca
    24301 gaaatcacct ggctgggttc gtttgttgcg tcgatgataa tatgcgcaac ttcgcgatat
    24361 agcgcatcgc gttcttccag cacttcctga acttcttcgc tcagcggttt tcccgttaag
    24421 gttggccgta aatcttcttc cggtgcagct tgcagtcggt taaccaggac tgatactggc
    24481 gcacacaaat aaaccacgat cccgttattt tgcatgaagt gacgattaaa ttccgtcaga
    24541 ataatgccgc cgcctgtagc gataacggtg gatggcgcag ttaccgcttc cagcgccgcc
    24601 gtttctctgg cgcgaaatcc cgcccactct tccctttcga cgatctccgc gaccgtcata
    24661 ttgagctgtg attgcaacca ctgatcggta tcgacaaacc gacggttaag cgaatcggca
    24721 agggccattc cgaccgttgt tttaccacag ccccgaggcc cgatcagaaa aagaggttgt
    24781 gtcatcgtgg gttttcccca ataggtcgca atgcggcgaa agccggtgtc atgagaataa
    24841 cgatcatacc atcaaactag tacaatttcg attgtaaaga aaaaattcca cttaaagtga
    24901 aaatctcaat acatccctta ctataccaat aaatattcaa gaatgaagtg taaataataa
    24961 attacattta gccacgacta cgttgcactt ccagccacca cttctccagc tccgcggcaa
    25021 aggcctggcg gtcacgttgt gaaaggctat ctggtccgcc ggtctggatc ccactggcac
    25081 gtaaggtatc cataaaatcg cgcatcgcca ggcgctcacg aatggtcgct ggcgtgtaac
    25141 gttcaccgcg cggattaatc gccgcagcgc ctttctcgat ggcttcagca gccaaaggta
    25201 tatctgcggt gatcaccaaa tcgcccgctt cacactgccg gacaatttcg ttatcggcaa
    25261 cgtcgaaacc tgccgcgacg cgcagcgtac gaataaatcg cgatggcggc acgcgtaaac
    25321 tctggtttgc taccagtacc agcggcatct gcatacgttc cgccgcgcga tacaaaatct
    25381 ctttaattac attgggacac gcgtcggcgt ccccccaaat tgtcataaag tcatcctttg
    25441 ttgggtaatc ctctattgtg tcgcgctttt gccttccggc atagttctgt ttatgcttct
    25501 gccagcgatt atcaaaacaa tgaatttcac ggcaggagtg aggcaatgga aaagaaaatc
    25561 ggttttattg gctgcggcaa tatgggaaaa gccattctcg gcggtctgat tgccagcggt
    25621 caggtgcttc cagggcaaat ctgggtatat accccctccc cggataaagt cgccgccctg
    25681 catgaccagt tcggcatcaa cgccgcagaa tcggcgcaag aagtggcgca aatcgccgac
    25741 atcatttttg ctgccgttaa acctggcatc atgattaaag tgcttagcga aatcacctcc
    25801 agcctgaata aagactctct ggtcgtttct attgctgcag gtgtcacgct cgaccagctt
    25861 gcccgcgcgc tgggccatga ccggaaaatt atccgcgcca tgccgaacac tcccgcgctg
    25921 gttaatgccg ggatgacctc ggtaacgcca aacgcgctgg taaccacaga agataccgct
    25981 gatgtgctga atattttccg ctgctttggc gaagcggaag taattgctga gccgatgatc
    26041 cacccggtgg tcggtgtgag cggttcttcg ccagcctacg tatttatgtt tatcgaagcg
    26101 atggccgacg ccgccgtgct gggcgggatg ccacgcgccc aggcgtataa atttgccgct
    26161 caggcggtaa tgggttccgc aaaaatggtg ctggaaacgg gagaacatct gggggcactg
    26221 aaagatatgg tctgctcacc gggaggcacc accattgaag cggtacgcgt actggaagag
    26281 aaaggcttcc gtgccgcagt gatcgaagcg atgacgaagt gtatggaaaa atcagaaaaa
    26341 ctcagcaaat cctgatgact ttcgccggac gtcaggccgc cacttcggtg cggttacgtc
    26401 cggctttctt tgctttgtaa agcgccaaat ctgccgattt caaccactca cgatagtgac
    26461 tcatttgtgg gttcagcggc gcaaccccca cactaatccg taaagttacc tgtggcgtat
    26521 tcggcaagcg taacgtgttt agcccttcat gcacccgtaa catggcggta atggcgctct
    26581 cagctggcgt accggacatg attactgcaa actcatcgcc gccaaaccga ccaatcacat
    26641 cgctaccgcg cagggtaatt tgtaactgtc gggtaagcgc cacaatcgct tcatcgccca
    26701 catcatgacc ccaggtatcg ttgatgctct tgaaatggtc gatatcgata atcagtaacg
    26761 ttgcatcgcg attatgccgc cgacagttat caaattcatt gcgtaacata gtttcccaat
    26821 gacgtcggtt atacacgccc gtcatgccgt cgcgggtact catgacctgc aacctgcgtt
    26881 tatgttccgc cagtttggtt gccgtctggt agctgaccca gccaaacagc agaggataaa
    26941 tgacgataat gggaagggag agccaccatt ccagcggcgc gctattgaac gacacggtga
    27001 tgcccgtcag ttcgagggtg acaaggcagg aaaccaccat caacaccaga cccgcaacaa
    27061 acagacgggg gccgcctgcc cccatcaaat tcagacacat aatcatcaac atcgcggtgg
    27121 aaggcagcac gtttacgccc attacgccta cccacattcc cgctaatact gcatcggttt
    27181 ttaagttgta aatttcccgg ctaagcggat cgacggccct gctcgctatc tgccaggcta
    27241 aatgcggcca gacgaacgcc cagccgacca acaccagcca ccaccagccc ggcggcgggt
    27301 gcgaaaccag cgttgaagca atcggtaaga acatgccagc caggccaacc gcacggggta
    27361 gtctgacgcg acgggcgaag cgcagcccgg accgctgatg ttcgttttga ggagttaaag
    27421 gaggttcctc cccatgcgcc gccgcttttt tgaaaaagtt ttcatcattc attatttttg
    27481 ggaacattca gaaacaattt tcccaaatta tagagacggg gctaaaggca gaagtatgaa
    27541 atttcgggtg agccactttc gtagctcacc cgttagcact atcaggtatc aggcggcttt
    27601 cttgaggcag gcactcataa acttattacg atcatcacct ttctgagatt gttacgttgc
    27661 ttgattatta cattcgcgca tcttttgctg ctgtggcgtc aaactttttt caccaggcgc
    27721 agacttgctg ttcttcaggc aatcactcat gtaggtctta cgagcatccc ctttcaacgc
    27781 ctgcgccatc gcctgctgat tacaggaggt catacgctgt tgttgtgggg ttaaagttct
    27841 ctcggcagcg ccgacggtgg ttaaaaaaac cagaccgaaa agcaaggtaa ccagtaatgt
    27901 tattttcata gcaccatccc tcttcatgtt ttaaccatga gcgtatgcgc ccgtgatttg
    27961 ccattaagtc tggttgctaa cagcaaaaaa accacccggc agcgaaaatt cactgccggg
    28021 cgcggtttta tttcagcccc agggcggctt tcatggtata gaagagatcg gtctggtcgg
    28081 tcagtccaac aacattggcg gcatgcgggc catacgccgc aatacgcaac tgactgcctg
    28141 tatgttcttg tgaatcctct tcggagttcc cgtaactcat caccatcact gcgccatctt
    28201 tggtatttag cgcctgggtg aggcccggcg ctttggtatc cggcgcaaca atctggctgg
    28261 cgtgggcgtg atcagcggtg actatgacca acgtgttacc ctccttttta gcgaattcca
    28321 gcgcccgttg tacggcttca tcgagatcga ccgtctcgcc aatttgccca caaggattcg
    28381 cggcgtgatc ctgtttatcg attgacgcac cttcaacttg caggaaaaat cctttctcat
    28441 ttttactcaa caattcaatg gatttgtcgg tcatctgcgc cagggttggt acactgtcat
    28501 tacgttgcgg attaggcgta caggtgactg cgggcttatc gatattgcca tggtacgttg
    28561 ctttcggtcc ttgccagcgc actggcatat tgccgtcagc aaacaggcca agcaggggtt
    28621 tttgctgatt cgcttccgtc accgaattca gtgaggcggc atcgttcacc aactgataac
    28681 cacgcgcctg tgcctgttca cgcagcgttt ttccctgcca ttcaccagcg attgccgttt
    28741 cagcaaaggt ttttgcgcca ccgccaagcg tgacgtcggc acgagcgtta agcaactgtt
    28801 cggtaatcga tccttttccg cctttttcca gagcgttacc cggacatttt tcactggtcg
    28861 cgctcggacc gtagcatttg cgcgaggtca catgtgccac cagcgcagcg ggcgtggcat
    28921 cctgcaactc tgcggtagaa acgttaccgg tcgccagacc tgcggctttt gccatttcca
    28981 gaatcgttgg gtgatcattt tcgtgaatat cgacgcccag cgcgccgtta taggttttga
    29041 caccggttga ccaggcggtt gctgatgcag ccgaatcggt gacgtagtcc ggtttgccgg
    29101 tttttttatt cagcgcatag tgagtgtatt gcccggtaag cggtaaggca tcgatacctt
    29161 taaaaaagcc gcccgcacct tcggcataat tacgtgcggc tgtaatttcc gaatccccca
    29221 tcccatcgcc aatcagcaaa ataatatttt ttgcaggttt atcgctaaga gaatcacgca
    29281 gagcggcagt ctgatccccc gttaaacggc gagcaccgcc gggtgcagta atatcgccct
    29341 gagcagcccg gttttccaga acaggcattt ctggtgtccg ggcttttgtc acaggggtaa
    29401 acagtaacgg taagagtgcc agtgcaatag tgctttgttt cactttattt tctccatgta
    29461 caaatacatt aaaaaataaa aacaaagcga ctataagtct cggccgtgac aactttatga
    29521 caactgttga aaagattaac tttttactga cgaggatgct tcaataactt ctttacgtaa
    29581 tcgcgcagca gctccgtatc gtcgtcagga atgctggcat cgggctttac ctcgtacagc
    29641 gccccctcta cctgatcaat caacctctgt tggtcatttt gcgccatatt gcgaagcatt
    29701 gcagtgacga taatctccaa agcttctacc tgcgcgcaca gttctttcga ctcttcttct
    29761 ttttgggcaa gcttaaataa caactcagca atgagatttt tcatgtctgt atttccttat
    29821 ccaaagtatg gagaagttaa cattatgttt cacaacttca tagtgtctgg aagtattatt
    29881 tttatgacaa aggaaatact ttgcgcaaat attttttgtt tgattaccag cgaaacgttt
    29941 ctcttattta aataattacc cacacaaaat acaggctttt aattatcaac ctttattata
    30001 aataaaagtt atgaaatata ttctcttcgt taacttataa ttaagagaaa aaactcaccg
    30061 tatggccatt taagccagga ataaattagc ttcccgttca tcatttttgt gatcttgcgc
    30121 acatctttga gataacgcac tttcttcacc agtacgttgc acgctttgtc agcagaagat
    30181 tgcaacattc tgtcagaagg ccgcgaatcc cccgttttgt cgtggtaatg tatgcacttt
    30241 gtgttagacg ggataggttt ttaagatgga aaaactgcgg gtaggaatcg tttttggtgg
    30301 taaatcagcg gaacatgaag tgtctctgca atcggcaaaa aacattgtcg atgccattga
    30361 taaaagtcgc ttcgacgttg tgctgctggg cattgataaa caagggcaat ggcacgtcag
    30421 cgatgccagc aattatctgc taaatgcaga cgatcctgcc catattgcgt tgcgcccttc
    30481 ggcgaccacc cttgcgcagg tgccaggtaa acatgagcat cagcttatcg acgcgcaaaa
    30541 cggtcagccg ttgccgacgg tggatgtcat tttcccgatt gtccacggta cgctgggcga
    30601 agatggttcc ttgcagggaa tgctgcgggt cgccaattta ccgtttgtag gttctgatgt
    30661 tctggcttca gcagcctgta tggataaaga tgtcaccaaa cgtctgctgc gcgatgccgg
    30721 gctgaacatt gcgccattta ttaccctgac gcgcgctaat cgtcacaaca tcagttttgc
    30781 cgaagtggag tctaaactgg ggttaccact gtttgtaaaa ccggctaatc agggctcttc
    30841 tgttggtgtc agcaaagtaa ccagtgaaga acagtacgca attgccgtcg atctggcgtt
    30901 cgagttcgat cataaagtga tcgttgagca agggatcaaa ggtcgtgaga tcgaatgcgc
    30961 aattctgggc aacgacaatc cgcaagccag cacctgtggc gagatcgtac tcaccagcga
    31021 tttctatgcc tacgacacca agtacattga cgaagatggc gcgaaagtgg tagttccggc
    31081 agccattgcg ccagaaatca acgataagat ccgggcgatt gccgttcagg cttatcagac
    31141 gttgggatgc gcaggcatgg cgcgtgtaga cgtgttttta accccagaga acgaagtggt
    31201 gatcaacgag attaacacac tgcctggctt caccaacatc agtatgtatc cgaagctgtg
    31261 gcaagccagc ggtctgggtt acaccgatct gatcacacgt ttgattgagc tggcgctgga
    31321 gcgtcacgct gcggataacg cattgaaaac cacaatgtaa tattttaacg cccgataata
    31381 ttcttattgg gcgttttcag tttcttcatc gcgacgacga ataatcaacc ccgccagcca
    31441 gaaactaatc acccacgtca ccagaccgac ggcataggtc tgccaacctt ttgcttcaaa
    31501 tcccagtaac cccaccacgc cattaagaat gaatataagg ccaatggcga acgcatagta
    31561 gtgccagtca cggcggattt ttacaggcag attcatggca gctccgttaa cgaaagacaa
    31621 catccttgca tattctgcaa caaccgtctg tggtgtagac aacattttcg taattgttaa
    31681 taaatttaac ttaaagttgc cattttgtga ctcgcaacga atgttcccgc ttcgggaata
    31741 ttcccaacat caatttacca tgattctgat attgacaatc taaatgacct gtcagacttg
    31801 ccataagccg ctggtatcac accagaagag aagcagatga cttccggagg tttttatggc
    31861 tgatttcacc ctgtcaaaat cgctgtttag cggaaaatat cgcaatgcct cttcaacgcc
    31921 tggcaacatt gcctatgcgt tgtttgtgct gttttgcttt tgggctgggg cgcaattgct
    31981 gaacctgtta gtgcatgcgc ccggcgtcta tgagcgttta atgcaggtcc aggaaacagg
    32041 tcgcccacgg gtggaaattg gtttaggtgt cggcaccatt ttcgggctaa tcccgttttt
    32101 agcaggctgc ctcatttttg cagtggtggc gctatggctg cactggcgac atcgccgcca
    32161 gtaaaattta cgttgccaga tgcggcctga aacgccttat ctggcctgac attcctgttt
    32221 gatcactgtt tcatacaacg cgcccgccgt tcgtctacgc gcttcgcaaa ccaggccgta
    32281 gtcaggttgc gggtgatttt cgggctttcc agttgaatgc caggcaacat ttcgcggggt
    32341 agtgatttac ccgttttcgc ttcggcaagt tgataaactt tcttgtacag cgccgtctcc
    32401 tcaaaagaga agctgtcacc tttctctaac tgacggcgaa tttcgctgtc gctcatcccc
    32461 agttttcccg ccagtttgcg cgttgccagt tcggttttcc cgggttcttt actgtcgtaa
    32521 cgaattaaat caccgtccag tgccagcttc acgccgctgg ccttactgac tgcgttctga
    32581 aacgcggcat tacggctggc gtaccagcca gcgttaaaat cagcaaagcg gtatatcggt
    32641 gcgctatagc tggcgggata attcagtaaa tggtaagtac caaaccacaa cccgccgcgg
    32701 cgactgaaga cttcctgacg gactgtaccg tccattttcc acggataccc tttggtatgc
    32761 tgttcggcaa aagcaatgct gacctgcatc ggcccaccgg tgcgcaccgg attaagcgaa
    32821 ccaaacagcg tctgccccat tggtaccatg ctgatcagat cgtcaaaaat cgcgctcaat
    32881 tgcttttctg tacgcaccga atctaaccgt tcgctataac ttttgccgtt tggcgatttg
    32941 atttttagcg cggtatgaac cagaaaagca ggaatgtgca tccgttcagc acgacggtca
    33001 atctcttgcc aggcgatctt gcttaagccc ggaacggccg gatctgcctg ataatttgac
    33061 tcctgctgcg ccaccgccag caccgagcag acgttttcca gcgtcggtgc cagcccctga
    33121 ctttcaaagg tggtggcgag atctttcgcc caggcatcgc ggtctttcac gctcgcaggc
    33181 atcttctgcc gcacgacgct cgctacatct atcgcttttt cgcccttttt caacggttgc
    33241 ggagcctgac tactacaccc cgctaaaacc agaaccgcca acaatgacag cgaagataga
    33301 tgattgacgc gcgacattac ttctcctttt tagctcaagg tatgggttac ttcctgaatt
    33361 ttgtcaccat ccagctcatg ttcaaagctg cgcagacgtt tgtagataga catcaactca
    33421 accagtgtgg tccatgagtt aatcaggtac tggaaagcac cgcgaacctg accaaaaacg
    33481 ttggtaatct gcgtcatcag gccgagcgta atcgtaccgg caacaattga cggaaacagc
    33541 aagaacaaac cgaaaacgtt atcgacctgc aaatagagaa tgcgggcgat gttgaaatac
    33601 atatagtgaa aatagaggcg aaaatagttt ttccgtacgg cgctaaacag ctcgcgtacc
    33661 gtaggcggcg tcgcgcgcgt ggcatcgtct tcaccataaa ccagctcttt acggtaggcg
    33721 gcctctactc gctggttttt aaactccagc cccggcagtt tgatccctac cactgccagc
    33781 aatccggtcc ccatcagcga ccagacgata gcggcaatca ccagaccata cggaatgtgc
    33841 ccgataatcg gcagctccgg cacatgcgcg gagagcgtta ccagcaccgg caggaaggcg
    33901 atcaacgtca tgatggcgtt gataaaactg acgcccatat tctccagcgt tgaagcaaaa
    33961 cgcatggtgt cttcctgcac acgctgtgcg gcaccttcga tatgacgcag ttgttgccag
    34021 ttcgccatgt aatattcgtt catcgccgta cgccagcgga acacatagtg actgacaaag
    34081 aagttgttca gtacactgat caccaccgcg atcagcgcaa tccccagaaa gacgcccact
    34141 tcgcggtaaa attgttcgat agtgacttta tgcggcgaac ttagcgcggt ttgaatcaga
    34201 tcatagaacg gtgcatacca ggcgttgacg gcgaccccga cttccaccaa aaaccaggtg
    34261 acgaagatga tcagtgcagt accgagtatt gaccagtatt gccaacggtg cgggctgtag
    34321 ataaaccaga aaaatgcaaa aagtcctacg caaacaatgt agtaagcgta aaaaatcagg
    34381 aaatccaacg accagaaacg cgcggcgcta atcgggatct gcccggaagc gccggtgata
    34441 cgcgccaccc agtcaccccc accggcttgc cagaagataa cggcaatcaa tgcccaaaca
    34501 aaggccaaga gaaaaaacgc tcccggcttt gggaaaaaag acttaaacat atgcactcct
    34561 gctaacttct tatcgtttta acaactgctg tgtattaacc gcatgaccac tacaaagcgt
    34621 cagccaaatg aaaccgccca ttgtgaccca tagcaaggcg cttagttcgc cagcctgacc
    34681 ataagaattg tttcgacgga tttcacaaac caaagattgt ttacataagc ggattaacac
    34741 gcgcaggatc acaaatgcag gcattggtga gcaggaaaaa gatcgtgttt acgcgccgtt
    34801 acgtttttaa cactattatt gcactaattc gccctttgca atccatcaat gagtagtata
    34861 aatacgctca gttaccttca ttcaatctat ggacaccacc gttgaaacgt agtctgcttt
    34921 tttctgccgt gctgtgtgcg gcgtcattga cctccgtcca tgcggcgcag ccgatcactg
    34981 aaccggagtt tgcctctgat attgttgatc gttatgccga tcatattttt tacggcagcg
    35041 gtgccacggg gatggcgctg gttgttatcg acggtaacca gcgcgtcttt cgcagttatg
    35101 gcgaaacgcg acctggtaat aacgttcgcc cgcagatgga ttcggtcgtg cgtattgctt
    35161 ccctcaccaa gctaatgacc agtgagatgc tggtgaaatt gctcgaccag gggaccgtga
    35221 agttaaacga tccgctaagt aaatatgctc cgccaagcgc acgcgtgcca acctacaatg
    35281 ggacgcccat tacgctggtg aatttggcaa cccataccag cgccctgccc cgtgaacagc
    35341 ccggtggcgc ggcacatcgt ccggtgtttg tctggccaac gcgcgagcaa cgctggaaat
    35401 acctttctac gacgaagctg aaagccgcgc caggcagtca ggcggcgtac tctaaccttg
    35461 cgttcgacct gctggctgat gcactggcga atgcgtccgg caagccttat acccagttgt
    35521 ttgaagagca gattacccgt ccattgggga tgaaagacac cacctacacc ccctcaccgg
    35581 atcagtgccg tcgtttaatg gttgcagagc gcggtgccag tccatgcaat aacacgctgg
    35641 cggcaattgg cagcggcggc gtctattcca cgcctggcga tatgatgcgc tggatgcagc
    35701 agtatttgtc atctgatttt tatcagcgca gtaaccaggc agatcgcatg cagacgttga
    35761 tttatcagcg cgcgcagttt acgaaagtga ttggcatgga tgtccccggc aaagcggatg
    35821 cgcttggttt aggctgggta tatatggccc cgaaagaggg gcgtccgggg attattcaga
    35881 agacaggtgg tggtggcggt ttcattacct atatggcgat gatcccgcag aagaatattg
    35941 gcgcgtttgt ggtggtcact cgttcgccgt tgacgcgctt taaaaatatg agcgatggca
    36001 tcaatgacct ggtgaccgag ctaagcggga ataaaccgct ggttatcccc gcatcctgat
    36061 taatactctg aaggcaaacg gttgatagcg accagtttgc ctttattcat ttcgatatag
    36121 ccgcctttac gcaaagcagc gagaacttct gcgacgacag aacgcgatat gcgtgtacgt
    36181 tgatggatat aattcatcac accaatacgt gatcgcaatt cttcattcca gtcaatcatt
    36241 gataataatg ttgcgcggat ttgttcgtag gaattatgcc caatgagctg cacatcgcgt
    36301 aattccagaa ttctattttg ccaggctaac cagtaaaaag cgtctcgcca gagttgattt
    36361 tgttcaataa gcgtaatggt ttgtttggct ggtagatgat atcccgtaca gtttccttct
    36421 gatattaatt tgtatggtat atcgtttttc attaaaccat cagccagccc cataatataa
    36481 g
//
LOCUS       DAJVTL010000027        35988 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.027, whole genome shotgun sequence.
ACCESSION   DAJVTL010000027 DAJVTL010000000
VERSION     DAJVTL010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35988
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.027"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(14..601)
                     /gene="mog"
                     /locus_tag="OQQ26_001308"
     CDS             complement(14..601)
                     /gene="mog"
                     /locus_tag="OQQ26_001308"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HCS1856815.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELET
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
                     MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFA
                     SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
     gene            complement(716..1669)
                     /gene="tal"
                     /locus_tag="OQQ26_001309"
     CDS             complement(716..1669)
                     /gene="tal"
                     /locus_tag="OQQ26_001309"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCS1856816.1"
                     /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
                     ETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARI
                     TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
     gene            1947..3377
                     /locus_tag="OQQ26_001310"
                     /pseudo
     CDS             1947..3377
                     /locus_tag="OQQ26_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308034.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
     gene            3447..4223
                     /gene="yaaA"
                     /locus_tag="OQQ26_001311"
     CDS             3447..4223
                     /gene="yaaA"
                     /locus_tag="OQQ26_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HCS1856817.1"
                     /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP
                     QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
                     AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
                     IIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR"
     gene            complement(4376..4684)
                     /locus_tag="OQQ26_001312"
     CDS             complement(4376..4684)
                     /locus_tag="OQQ26_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HCS1856818.1"
                     /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGY
                     YWDGAHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHNKHHDHRNDHRGDHRPGPDKHHR
                     "
     gene            complement(4898..6184)
                     /gene="thrC"
                     /locus_tag="OQQ26_001313"
     CDS             complement(4898..6184)
                     /gene="thrC"
                     /locus_tag="OQQ26_001313"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HCS1856819.1"
                     /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
                     EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
                     LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN
                     DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
                     TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
                     TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ"
     gene            complement(6185..7117)
                     /gene="thrB"
                     /locus_tag="OQQ26_001314"
     CDS             complement(6185..7117)
                     /gene="thrB"
                     /locus_tag="OQQ26_001314"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HCS1856820.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF
                     SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
                     VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
                     QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
     gene            complement(7119..9581)
                     /gene="thrA"
                     /locus_tag="OQQ26_001315"
     CDS             complement(7119..9581)
                     /gene="thrA"
                     /locus_tag="OQQ26_001315"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HCS1856821.1"
                     /translation="MRVLKFGGTSVANAEHFLRVADILESNARQGQVATVLSAPAKIT
                     NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHKVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
                     VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
                     LLTSVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELVKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELADIEIEPVLSAEFNAEGDVAAFMANLSQLDDLFAVRVAKARDEG
                     KVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     misc_feature    complement(9607..9726)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00506"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Thr leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00506"
     gene            complement(9662..9727)
                     /gene="thrL"
                     /locus_tag="OQQ26_001316"
     CDS             complement(9662..9727)
                     /gene="thrL"
                     /locus_tag="OQQ26_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HCS1856822.1"
                     /translation="MKRISTTITTTITITTGNGAG"
     gene            complement(9941..10627)
                     /locus_tag="OQQ26_001317"
     CDS             complement(9941..10627)
                     /locus_tag="OQQ26_001317"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HCS1856823.1"
                     /translation="MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPAT
                     RWVAHGSGDVIDNIKVFPTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKS
                     SWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQ
                     QPAKSDTTADQHQLQALRERVMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRL
                     LHDIEKNITK"
     gene            complement(11027..11167)
                     /locus_tag="OQQ26_001318"
     CDS             complement(11027..11167)
                     /locus_tag="OQQ26_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856824.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILT
                     AT"
     gene            11263..11979
                     /gene="arcA"
                     /locus_tag="OQQ26_001319"
     CDS             11263..11979
                     /gene="arcA"
                     /locus_tag="OQQ26_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003621071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HCS1856825.1"
                     /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLED"
     gene            complement(12038..13390)
                     /gene="creD"
                     /locus_tag="OQQ26_001320"
     CDS             complement(12038..13390)
                     /gene="creD"
                     /locus_tag="OQQ26_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HCS1856826.1"
                     /translation="MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDA
                     IRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEE
                     RKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNIILGKPFIVISVGDARGIGVVKAPE
                     VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLQLNMALNLSGTGDLSVVPAGRNS
                     EMTLTSNWPHPSFLGDFLPAKREVSESGFQAQWQSSWFANNLGERFASGNDTGWENFP
                     AFSVAVTTPADQYQLTDRATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVM
                     WGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTTDDELRIWK
                     "
     gene            complement(13448..14872)
                     /gene="creC"
                     /locus_tag="OQQ26_001321"
     CDS             complement(13448..14872)
                     /gene="creC"
                     /locus_tag="OQQ26_001321"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HCS1856827.1"
                     /translation="MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLID
                     TATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDAHG
                     KVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAVPIMDGSRL
                     IGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYAD
                     SVTDNKPVPLPDLGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRG
                     AAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTAVDVAALF
                     RRVSEARTVQLAEKNITLHVMPTEVNVAAEPALLDQALGNLLDNAIDFTPESGCITLS
                     AEVDQEHVTLKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
                     GEVTLRNVQEGGVLASLRLHRHFT"
     gene            complement(14872..15561)
                     /gene="creB"
                     /locus_tag="OQQ26_001322"
     CDS             complement(14872..15561)
                     /gene="creB"
                     /locus_tag="OQQ26_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HCS1856828.1"
                     /translation="MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR
                     QQVPDVMILDVGLPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYV
                     AKPFSPREVCARVRTLLRRVKKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEF
                     LLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINT
                     HRGMGYSLRGL"
     gene            complement(15574..16047)
                     /gene="creA"
                     /locus_tag="OQQ26_001323"
     CDS             complement(15574..16047)
                     /gene="creA"
                     /locus_tag="OQQ26_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HCS1856829.1"
                     /translation="MKYKHLILSLNLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGE
                     VVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ"
     gene            16258..17127
                     /gene="robA"
                     /locus_tag="OQQ26_001324"
     CDS             16258..17127
                     /gene="robA"
                     /locus_tag="OQQ26_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HCS1856830.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMR
                     YQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVM
                     LQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRP
                     INLRCELLIPIRR"
     gene            complement(17124..17771)
                     /gene="gpmB"
                     /locus_tag="OQQ26_001325"
     CDS             complement(17124..17771)
                     /gene="gpmB"
                     /locus_tag="OQQ26_001325"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HCS1856831.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAK
                     ELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEEN
                     WRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAERRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR"
     gene            17823..18344
                     /gene="yjjX"
                     /locus_tag="OQQ26_001326"
     CDS             17823..18344
                     /gene="yjjX"
                     /locus_tag="OQQ26_001326"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/xanthosine triphosphatase"
                     /protein_id="HCS1856832.1"
                     /translation="MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQ
                     PFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSA
                     TLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVIL
                     ALSPFHNAVYQAL"
     gene            complement(18429..18755)
                     /gene="trpR"
                     /locus_tag="OQQ26_001327"
     CDS             complement(18429..18755)
                     /gene="trpR"
                     /locus_tag="OQQ26_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HCS1856833.1"
                     /translation="MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLT
                     PDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEE
                     VLLKSD"
     gene            complement(18845..20782)
                     /gene="sltY"
                     /locus_tag="OQQ26_001328"
     CDS             complement(18845..20782)
                     /gene="sltY"
                     /locus_tag="OQQ26_001328"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HCS1856834.1"
                     /translation="MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELRLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAI
                     ISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNED
                     QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYE
                     LKIDKAPQNVDSTLTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYA
                     FNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQ
                     QFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRYFMGDKPTLMSATEWGRRY"
     gene            20993..22660
                     /gene="ettA"
                     /locus_tag="OQQ26_001329"
     CDS             20993..22660
                     /gene="ettA"
                     /locus_tag="OQQ26_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017145039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HCS1856835.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI
                     ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWV
                     RQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYG
                     DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISDQEQPDSGTITLGETVKLASVD
                     QFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK"
     gene            complement(22767..22934)
                     /locus_tag="OQQ26_001330"
     CDS             complement(22767..22934)
                     /locus_tag="OQQ26_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856836.1"
                     /translation="MSFFDELKTSLEEAVEIKQGLKKPARVTRHEIEDAKAVVDRKRC
                     SRRIRHSVLNA"
     gene            complement(22968..24200)
                     /gene="nadR"
                     /locus_tag="OQQ26_001331"
     CDS             complement(22968..24200)
                     /gene="nadR"
                     /locus_tag="OQQ26_001331"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463436.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HCS1856837.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDD
                     TRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     IALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEDDYD
                     SRFLRCVELVREMMGEQG"
     gene            complement(24221..25603)
                     /gene="radA"
                     /locus_tag="OQQ26_001332"
     CDS             complement(24221..25603)
                     /gene="radA"
                     /locus_tag="OQQ26_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HCS1856838.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIE
                     QICLIAEEEQPKLMVIDSIQVMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
                     GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
                     LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
                     QNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
                     DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKL
                     SDALSVFDDL"
     gene            complement(25652..26620)
                     /gene="serB"
                     /locus_tag="OQQ26_001333"
     CDS             complement(25652..26620)
                     /gene="serB"
                     /locus_tag="OQQ26_001333"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HCS1856839.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLG
                     KIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRS
                     RVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKL
                     RLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGAND
                     LPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK"
     gene            26726..27370
                     /locus_tag="OQQ26_001334"
     CDS             26726..27370
                     /locus_tag="OQQ26_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HCS1856840.1"
                     /translation="MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR
                     SGESVEVRDRLALDGKKAGGYFNQQIVEPISGKNGPLGYLRLTLDTHTLATEAQQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE"
     gene            27398..28414
                     /gene="lplA"
                     /locus_tag="OQQ26_001335"
     CDS             27398..28414
                     /gene="lplA"
                     /locus_tag="OQQ26_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HCS1856841.1"
                     /translation="MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     SIVLNALNALGVSAEASGRNDLVVKTTEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEA
                     EIISPDKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHI
                     TRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSAWMA
                     GAVR"
     gene            28446..28709
                     /locus_tag="OQQ26_001336"
     CDS             28446..28709
                     /locus_tag="OQQ26_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1856842.1"
                     /translation="MIDLENQEREIINLMFSQRISWLAAVRIRHKLSLAEVSKMLGIS
                     INSLKQIEKTERLSSNIKSKMAEIYGCPPELLICPSWMTAEHK"
     gene            complement(28793..29512)
                     /gene="deoD"
                     /locus_tag="OQQ26_001337"
     CDS             complement(28793..29512)
                     /gene="deoD"
                     /locus_tag="OQQ26_001337"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HCS1856843.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMARNAVDAANALGIDARVGNLFSADLF
                     YSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
     gene            complement(29592..30815)
                     /gene="deoB"
                     /locus_tag="OQQ26_001338"
     CDS             complement(29592..30815)
                     /gene="deoB"
                     /locus_tag="OQQ26_001338"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HCS1856844.1"
                     /translation="MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGH
                     WEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMS
                     LLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLA
                     KYFGTSDMEYGKAMF"
     gene            complement(30867..32189)
                     /gene="deoA"
                     /locus_tag="OQQ26_001339"
     CDS             complement(30867..32189)
                     /gene="deoA"
                     /locus_tag="OQQ26_001339"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313368.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HCS1856845.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYL
                     PTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQ
                     VDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE"
     gene            complement(32316..33095)
                     /gene="deoC"
                     /locus_tag="OQQ26_001340"
     CDS             complement(32316..33095)
                     /gene="deoC"
                     /locus_tag="OQQ26_001340"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HCS1856846.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVD
                     VVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIK
                     AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI
                     ADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASNY"
     gene            33353..34903
                     /locus_tag="OQQ26_001341"
     CDS             33353..34903
                     /locus_tag="OQQ26_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HCS1856847.1"
                     /translation="MPTSHENALQQRCQQIVTSPVLSPEQKRHFLAQEAENNLPYPQL
                     PAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLL
                     TILYHHVPSVTSMPVYLGQLDALLQPHVRILTQDEIDVRIKRFWRYLDRTLPDAFMHA
                     NIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIAN
                     GPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYC
                     QQQIAIIDARCEFLYQQSHFFENSFLMKEGLINPERFVPMFGMYGLAEAVNLLCEKEG
                     IAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGAR
                     LPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMRE
                     FTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISH
                     EQQMRFSQ"
     gene            34875..35738
                     /locus_tag="OQQ26_001342"
                     /pseudo
     CDS             34875..35738
                     /locus_tag="OQQ26_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418796.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
BASE COUNT         8452 a         9862 c         9111 g         8563 t
ORIGIN      
        1 cggggggatt tttttattcg ctaacgtcgc gtcttgcact ctttggtctg aatgcagcaa
       61 ccacttctgg tgccgtttca acgtatggcc cttccagcaa ctgaatgcag tacggtacgc
      121 tggcaaaaat accgtgtacc acaacgttac cctcagcgtc cttcacacct tccagcgtct
      181 ctttaataga cttcggctga ccgggtaagt taaggatcag cgcctgtttg cgaatcacgc
      241 ccacctgacg cgaaaggatc gcagttggta caaaatgcag gctgatctgg cgcatctgtt
      301 caccaaagcc aggcatctcg cggtccgcta ctgccagcgt agcatcgggc gttacgtcac
      361 gacgcgccgg gccagttccg cccgtggtga gcaccagatg gcaactcatt tcatccacca
      421 gctcacacaa cgtttgctcg atgatcgcct gctcatcggg gattaagcgg gtttccagtt
      481 caaacggcgt ggttagcgcc gatgtcagcc attcttccag tgcagggata cctttatcct
      541 gataaacgcc gctggatgcg cgatcagaga tggaaactaa gccaatacgt aaagtattca
      601 tcaagatttt tccgtttaaa cagtctcgtt aaacagaatg atacactgcg aagggagtga
      661 cagacaggct tcagaagagg tagcgtgacc gacttcccgg tcacgctaag aatgattaca
      721 gcagatcgcc gatcattttt tccagttttt cctggtcaat agcaaactta cggatacctt
      781 ccgccagttt atctactgcc attggatcct ggttgtgctg ccacaggaac tcggactcag
      841 tgatacgcgc cggacgcgct ttcacttcgc cggtgtaaga cagtttacgt tcgatagccc
      901 cttcgctctc agccagctct ttcagcagtg ccggtgcgat ggtcagacgg tcgcagcctg
      961 ccagttccag aatttcgccg atgttacgga agcttgcgcc cataaccacg gtttcataac
     1021 cgtgctcttt gtagtactgg tagatttcag atacagaaac cacacccgga tcttctgccg
     1081 gagcgtactc tttcttatcg gtattcgctt tgtaccagtc aagaatacgg ccaacaaacg
     1141 gcgagatcag gaacacgccc gcttccgcac aagcacgagc ctgagcgaag gagaacagca
     1201 gggtcaggtt acagttgatg ccttcttttt ccaactgttc tgcagcacgg ataccctgcc
     1261 aggtagaagc cagtttgatc agaatacgat cgttgctaat accagcatcg ttgtagagtt
     1321 tgatcaggcg ttttgctttc gcaattgacg cttcggtgtc ataggaaaga cgcgcatcaa
     1381 cttcagttga gatacggccc ggaaccagtt tcaggatttc cagaccaata tttactgcca
     1441 gtttgtcggt cgcgtccacg atctgctgcg cgcgatcgtt gctctgctgt ttcgcccaag
     1501 cgacagcatc gtcaatcaac ttacggtatt ccggaatctg cgctgcgtta agaatgagag
     1561 aagggttggt tgtggcatcc tgcggttgat acagcttcat tgccgcgatg tccccagtgt
     1621 cggccactac ggtggtgtac tgacgaaggg aggtcaattt gtccgtcatg atagtatttc
     1681 tctttaaaca gcttgttagg ggatgtaacc ggtctgccct gatgatatca cgacgcaacg
     1741 tcagcgcaac cgccgacaag acggttatcg ccaggcgaga ctgtttcgga tttctgacac
     1801 tgcgttgata tcgcccgcca tttttataca aaacctcatg tatgctacgc agaagttatc
     1861 aagtacctcg tagcgtatat acttcttaaa caattggtaa cgtttacaca ggaaagtcat
     1921 cgcgaccggc aataagaggg atatgcatgc cagatttttt ctcctttatt aacagcgtcc
     1981 tttggggatc ggtaatgatt tacctgctct tcggcgcagg ttgttggttc acttttcgca
     2041 ccggatttgt gcagtttcgc tacatccgcc agtttggcaa aagtcttaaa aatagcattc
     2101 atccacagcc aggcggttta acctcatttc agtcattgtg taccagtctt gcggcgcgcg
     2161 tgggtagcgg caacctggcc ggcgttgcgc tggctattac cgccggtgga cctggagccg
     2221 tcttttggat gtgggttgcc gcgtttatcg gcatggcgac ctcgtttgcc gaatgttccc
     2281 ttgcacaact ttataaagaa cgtgacgtca atggacagtt tcgtggagga ccggcatggt
     2341 atatggcgcg cgggctgggg atgcgttgga tgggcgttct gttcgccgtc tttttgctca
     2401 tcgcctacgg cataattttc agcggagttc aggcgaacgc cgttgcccga gccctgagtt
     2461 tttcttttga ttttcccccg ctggtgacag gcattattct cgctgtcttt gctctgctgg
     2521 caatcactcg cggtcttcat ggcgtcgccc ggctcatgca ggggtttgtc ccgttgatgg
     2581 cgataatctg ggtactgacc agcctggtga tttgcgtaat aaatatcggg caacttcccc
     2641 acgtcatttg gtctattttt gagagtgctt ttggctggca ggaagcggca ggcggcgcgg
     2701 cgggatatac cttaagccag gctattacta acggttttca gcgcagtatg ttttccaatg
     2761 aggcgggaat ggggtcgacg ccaaacgcgg cagcggcagc ggcgtcctgg cctccgcatc
     2821 cggcagcaca agggattgtc cagatgattg gcatttttat cgaccccctg gtcatctgta
     2881 cggcaagcgc catgctgata ttactggcgg gtaacagcac aacctacatg ccgctggaag
     2941 gtattcagct tatccagaag gcgatgcggg tgctaatggg ttcctagggt gctgaatttg
     3001 ttaccctcgt ggttattctg tttgccttca gctccatcgt tgccaactac atttatgccg
     3061 aaaacaatct cttcttttta cgcctgaaca accctaaagc gatctggtgt ttgcggatct
     3121 gcaccttcgc aacggtcatc ggcggcacct tgctaagcct tccgctgatg tggcaactgg
     3181 cagatatcat aatggcctgc atggctatta ccaatttgac cgccatttta ctgctctcgc
     3241 ctgtggttca taccattgcc agtgattatc tacgccagcg taaactcggc gtgcgcccgg
     3301 tgtttgatcc gttgcgttat ccggatatcg gtcgccagct ttctccggac gcgtgggatg
     3361 atgtttcgca ggagtaatca caactatcga tcaactcatt ctcttttttt gctaaagtcg
     3421 gcataaattt cctgcaagga ctggatatgc tgattcttat ttcacctgcg aaaacgcttg
     3481 attaccaaag cccgttgacc accacgcgct atacgctgcc ggagctgtta gacaattcac
     3541 agcagttgat ccatgaagcg cggaaactga cgcctccgca gattagcacg ctgatgcgca
     3601 tcagcgacaa actggcgggt atcaacgccg ctcgctttca tgactggcag ccagatttca
     3661 cgccggcgaa tgcccgccag gcgattctgg cgtttaaagg tgatgtctac accggcttgc
     3721 aggccgaaac cttcagcgaa gacgatttcg attttgccca acagcatttg cgaatgcttt
     3781 ccggcttgta tggcgtactg cgcccgctcg atttaatgca gccttatcgt ctggaaatgg
     3841 ggatccgtct tgagaatgcc cgagggaaag atctgtatca attctgggga gatatcatca
     3901 ccaacaagct gaacgaggcg ctcgcagcac aaggcgataa tgtggtgatt aatctggcgt
     3961 cagatgagta ttttaaatcg gtgaagccga agaaattgaa tgccgagatt atcaagccgg
     4021 tgttcctcga tgagaagaac ggcaaattta agatcatcag cttctacgct aagaaagcac
     4081 gcggtctgat gagtcgtttc attattgaaa atcggctgac caaaccagag caactgactg
     4141 gttttaatag cgaaggttac ttctttgatg aagattcctc cagcaatggc gaactggtgt
     4201 ttaaacgcta cgagcagcgt taagtttgta gtcaatgccg gatgcggcgt gaacgcctta
     4261 tccggcctac aaaagcatgc agattcaata tattgcagaa ttaacgtagg cctgataaga
     4321 cgcgccagcg tcgcatcagg cgctgaatgc cggattgtta cccggcattt gtcatttagc
     4381 ggtgatgttt gtcaggcccc ggacgatgat cgccacggtg gtcattacga tgatcatggt
     4441 gcttgttatg gcgcggcggt ggcggcggtc cgtgtgggtg ccagcgattg cctcgccatt
     4501 cataatgttg tttccaccag ccgtggtcgc gccagtgagc gccatcccag taataaccgc
     4561 gattatcacg atcgcctatc tgtaatttta ctgacgggac taacgtaatt tccgcagcct
     4621 gcgctgccat gggagcgacc agaaccaggg aaagtgcgag tacgatagat tgcatctttt
     4681 tcacaggtta ctccttttat cattgcccgt tatgggtcga tatccggaga ttacgcgatg
     4741 agaacggcag ttgttattct ccgcaatcct aatctctaag ttaccgcatt tattgagaat
     4801 ttctcctttt cccctgtcgt ttttctccat aatttcttca taaaaaagcc gggctgcata
     4861 aaagcaaacc cggcctgatt gagataatga atagatttta ctgatgattc atcatcaatt
     4921 tacgcaacgc agcaaaatcg gcgggcagat tatgtgaaag caagggtaaa tcagcacgtt
     4981 ctgccagctc ttttggcaga tccaacgttt ccccgagaat cgcttccacg ctctctttaa
     5041 atttcgccgg atgcgcggtg ccgaggaaca agccatattc gcctggattc aactggtcac
     5101 gcagcgcacg atacgctacg gcagcgtgcg gctccgaagt gtagcccagt tcttttaact
     5161 cacgcattgt ctgttgcgtg gtttcatcat ccacggctgc ataacccagc tctttcagtt
     5221 gccagatttt gcggcggaac aactcttcca cacgcggcca gttgttcggc tgactcacgt
     5281 ccatcgcgtt ggataacgtc gcctgagtcg ctttgggtga ccactgaccg tcgtgcagga
     5341 aacgtggcac ggtatcgttc acgttggtcg cagcaataaa acgtttcacc ggcagaccga
     5401 gtgacttcgc cagcagaccc gccgtcaaat cgccgaagtt tccgcttggc accgagacaa
     5461 ccagctggtt gcgcgcctcc tgcggcagct gcgcaacagc ttcaaagtag tagcaaatct
     5521 gcgccagcaa acggctgatg ttaatcgagt tagccgagtt taaccccagc gccactttca
     5581 gctcttcatc atcaaacgcc tgcttcacca gcgcctgaca ggcatcgaaa tcgccgtcga
     5641 tggcaacagt ttcgatattg ccgcccaatg tacagaacag tttttcttgc agtggactga
     5701 ttttgcctcg tggatagagg ataaccactt tcacattcgg taaaccgtag aaagcatgag
     5761 ccactgccgc tccggtatca ccggaggtcg cggtcagaat ggtcactggc ttatcgcccg
     5821 caatatgggt cagcatttgt gccataaagc gaccgccgaa atctttaaat gccagcgttg
     5881 gcccgtggaa caattccaga caaccgacat cgctttcaac attggcgacc ggagccggga
     5941 aggcaaacgc cgcgcgcacg cgctcttcca ggatttcctg cgggatttca tcaccaataa
     6001 acgccgagag gatcttcgca ctgcgggtga caaaatccag cttcagcatc tcatcaattt
     6061 cagtcaggct gaattccggc aggtcgtgcg gaaaaaacag cccctgattt ttgcccaacc
     6121 cctgggttac ggcttgcgca aagctgacct gctcattgtg atctttaaga ttgtagagtt
     6181 tcatttagtt ttccagtact cgtgcgcccg ccgtatccag ccggcaaata tgaacaaaac
     6241 cttcctgatt ttgcaggtag ttcttaccca accagtcggc aacgcgctgg gcggtatccg
     6301 gcttgtcaca cagagcgaac aaggtcgggc cggagccgga gataccgctc gctaccgcgc
     6361 cgatttccgc gaccgcctgc cgcgcctgcc ggaagccagg cagtaaccgt tcacggtagg
     6421 gttctgcgat aacatctttc atcagcttcg cggcaagctc aggctgacgg gaatagcagg
     6481 cgtgaatgaa gcctgccaga tgtcgcccgt gcgcaatgca atcctggcgg cgatactgcg
     6541 ccggtaaaat agcccgggct tctgccgtcg agactttaat ccccggatac gccagcaccc
     6601 acagccactc atcaaaccct ggcacttgct ggctgatgat gtcgttttct tcgatcatca
     6661 actgcatacc accaagaaaa cacggtgcca cgttgtcgta atgaatgctg ccggagatac
     6721 gtccttccag ctcgcccatc aaagccagca aacgagtgtc attaagcggc ttgccgcagt
     6781 gttcattcat cgccatcagc gccgcgacca ccgaacaggc gctggagcct aagcccgagc
     6841 cgatcggcat attcttttcc agagtcatcg ccactggaat ttgcttgccc agctcctggc
     6901 aaaaacgctc ccagcactga taaacgatat tttcccgtgg ttctgacggc agcttatcgg
     6961 caaagcgtcc gaggttgttg agactgaatg tctctgccgc ctcaaccgtt actacatctc
     7021 cgagcaatgc accatcaacg ggtgtcaccg ccgccccgag cacatcaaac ccgacgctca
     7081 tattggcact ggaagccggg gcataaactt taaccatgtc agactcctaa cttccatgag
     7141 agggtacgta gcagatcggc aaagacaccg gcagcggtaa cgtcattgcc cgcaccatat
     7201 ccgcgcagca ccaacggcag cggctgataa tagtggctat aaaaggccag ggcgttttcg
     7261 ccatttttca ctttgaacag cggatcattc ccatccactt cggcaatctt cacgcggcag
     7321 acaccatctt catcaatatt gccaacatag cgcaaaactt ttccttcatc acgggccttc
     7381 gccacgcgca cggcaaagag atcgtcgagc tgtgacagat tcgccataaa agcggcaaca
     7441 tcaccctcgg cgttaaactc tgcggacagc acaggttcaa tttcaatatc cgccagctcc
     7501 agttcacgtc ccgtttcacg agcgagaatc aatagtttac gcgccacatc cataccagaa
     7561 agatcatctc gcgggtccgg ttcggtataa cccatttccc gcgccagcgt ggtcgcctcg
     7621 gagaaactca tgccttcgtc taacttgccg aagatataag aaagcgaacc tgaaagaatg
     7681 ccggagaact tcaccaattc atcacctgca ttgagcagat tttgcaggtt ctcaataacc
     7741 ggtaatccag ccccaacgtt ggtgtcatag aggaatttac gccgcgattt ttccgccgca
     7801 taacgcaact gatgatagta atccatcgac gaggtgttgg cctttttgtt cggcgtgaca
     7861 acgtggaaac cttcgcgcag gaagtcggca tattgatccg ccactgcctg gctggaggtg
     7921 cagtcaacaa tgaccgggtt cagcagatga tattctttca cgaggcgaat taagcgcccg
     7981 agattaaacg gctctttggc ttgtgcaagt tcttcctgcc agttttccag attaaggcca
     8041 tgcacactag tgagcagagc cttcgagttg gcaacgccgc agacacgtaa gtcgatatgt
     8101 ttattcttca gccagctttg ctgacgcttc agttgctcca gcagcgcacc gccaacgcca
     8161 ccgacgccaa tcacaaacac ttcgataacc tgatcggtat tgaacagcat ctgatgagta
     8221 acgcgcacgc cagtggtcgc atcatcgtta tttaccacga cagagattga gcgttcagaa
     8281 gatccctgag caatggcgac aatgttgata ttggcgcggg ccagcgcggc aaagaatttc
     8341 gccgagatcc cacgcaaggt gcgcatacca tcacctacca ccgagataat ggccagccgt
     8401 tccgtcaccg ccagcggctc cagtaagcct tctttcagtt ccaggtagaa ctcttcctgc
     8461 attgcccgtt cagcccgcac acagtcgctt tgcggaacgc agaaactgat actgtattcg
     8521 gaagatgatt gcgtaatcag caccacggaa atacgggcgc gtgacatcgc ggcaaagacg
     8581 cgcgccgcca tgccgaccat tcctttcatc cccgggccgg aaacgctgaa cattgccatg
     8641 ttattcagat tggaaatgcc cttgaccggt aattcgtctt catcacgact ggcaccaatg
     8701 agcgtacctg gtgcttgagg atttccggta tttttaatca ggcaagggat ctggaactgg
     8761 gcgatggggg taatggtgcg ggggtgaaga actttagcgc cgaagtagga aagctccatc
     8821 gcttcctggt aggacatcga cttcaacaac ctcgcatcgg gcacctgacg cgggtcgcag
     8881 gtatagaccc cgtcaacgtc cgtccaaatc tcgcaacaat cggcgcgtaa acaggcagcc
     8941 agcaccgccg cggagtagtc ggaaccgttg cgtccaagta ccaccagttc gcctttttca
     9001 ttaccggcgg tgaagcctgc catcagcacc atgtgatcag ccggaatacg acttgccgca
     9061 atacggcggg tggactcagc aatatcgacg gtagattcga ggtaatgccc cactgccagt
     9121 agtttttcga ccggatcgat aacggtaact ttgtgaccac gcgcttctaa cacgccggcc
     9181 ataatggcga tcgacatttt ctcgccacgg caaatcagcg cagcgttgat gctatccggg
     9241 cactgcccca acaaactaat gccatgcagg acatgtttta tttgggcaaa ttcctggtcg
     9301 acgaaagttt tcaattgcgc cagcgggaat cccggctggg cggcggcgag tcccgtcaaa
     9361 agttcggcaa aaatacgttc ggcatcgctg atattgggta aagcatcctg gccgctaatg
     9421 gttttttcaa tcatcgccac caggtggttg gtgattttgg cgggggcaga taggacggtg
     9481 gccacctgcc cctgcctagc attgctttcc agaatatcgg caacccgcag aaaatgttct
     9541 gcatttgcca ctgatgtacc gccgaacttc aacactcgca tggttgttac ctcgttacct
     9601 ttggtcgaaa aaaaagcccg cactgtcagg tgcgggcttt tttctgtgtt tcctgtacgc
     9661 gtcagcccgc accgttacct gtggtaatgg tgatggtggt ggtaatggtg gtgctaatgc
     9721 gtttcatgga tgttgtgtac tctgtaattt ttatctgtct gtgcgctatg cctatattgg
     9781 ttaaagtatt tagtgaccta agtcaataaa attttaattt actcacggca ggtaaccagt
     9841 tcagaagctg ctatcagaca ctcttttttt aatccacaca gagacatatt gcccgttgca
     9901 gtcagaatga aaagctgaaa aatacttact aaggcgtttt ttatttggtg atattttttt
     9961 caatatcatg cagcaaacgg tgcaacattg ccgtgtctcg ttgctctaaa agccccaggc
    10021 gttgctgtaa ccagtcgacc agttttatgt catctgccac tgccagagtc gtcagcaatg
    10081 ccatgactcg ttcgcgtaaa gcttgcagtt gatgttggtc tgccgttgtg tcacttttcg
    10141 ccggttgttg tattaatgtt gctaattgat agcaatagac catcaccgcc tgccccagat
    10201 tgagcgaagg ataatccgcc accatcggca caccagtaag aacgtcagcc aacgctaact
    10261 cttcgttagt cagcccggaa tcttcgcgac caaacaccag cgcggcatgg ctcatccatg
    10321 aagatttttc ctctaacagc ggcaccagtt ctactggcgt ggcgtagtaa tgatatttcg
    10381 cccgactacg cgcagtggtg gcgacagtga aatcgacatc gtgtaacgat tcagccagtg
    10441 tcgggaaaac tttaatatta tcaataacat caccagatcc atgtgcgacc cagcgggtgg
    10501 ctggctccag gtgtgcctga ctatcgacaa tccgcagttc gctaaaaccc atcgttttca
    10561 ttgcccgcgc cgctgcccca atattttctg ctctggcggg tgcgaccagg ataatcgtta
    10621 tacgcatatt gccactcttc ttgaccaaat aaccgcgaac agggtgatca ctgtcaactt
    10681 attacgcgtt aagaatttac aaattcttaa cgcaagtcgc agaaaaagcc ctttacttag
    10741 cttaaaaaag gctaaactat ttcctgactg tactaacggt ttaattgtta aaaaatgcta
    10801 catatccttc tgtttactta ggataatttt ataaaaaata aatctcgaca attggattca
    10861 ccacgtttat tagttgtatg atgcaactag ttggattatt aaaataatgt gacgaaagct
    10921 agcatttaga tacgatgatt tcatcaaact gttaacgtgc tacaattgaa cttgatatat
    10981 gtcaacgaag cgtagtttta ttgggtgtcc ggcccctctt agcctgttat gttgctgtta
    11041 aaatggttag gatgacagcc gtttttgaca ccgtcgggtc ctgagggaaa gtacccacga
    11101 ccaagctaat gatgttgttg acgttgatgg aaagtgcatc aagaacgcaa ttacgtactt
    11161 tagtcatgtt acgccgatca tgttaatttg cagcatgcat caggcaggtc agggactttt
    11221 gtacttcctg tttcgattta gttggcaatt taggtagcaa acatgcagac cccgcacatt
    11281 cttatcgttg aagacgagtt ggtaacacgc aacacgttga aaagtatttt cgaagcggaa
    11341 ggctatgatg ttttcgaagc gacagatggc gcggaaatgc atcagatcct ctctgaatat
    11401 gacatcaact tggtgatcat ggatatcaat ctgccgggta agaacggtct tctgttagcg
    11461 cgtgaactgc gcgagcaggc gaatgttgcg ttgatgttcc tgactggccg tgacaacgaa
    11521 gtcgataaaa ttctcggcct cgaaatcggt gcagatgact acatcaccaa accgttcaac
    11581 ccgcgtgaac tgacgattcg tgcacgcaac ctgctgtccc gtaccatgaa tctgggtact
    11641 gtcagcgaag aacgtcgtag cgttgaaagc tacaagttca atggttggga actggacatc
    11701 aacagccgtt cgttgatcgg ccctgatggc gagcagtaca agctgccgcg cagcgagttc
    11761 cgcgccatgc ttcacttctg tgaaaaccca ggcaaaattc agtctcgtgc tgaactgctg
    11821 aagaaaatga ccggccgtga gctgaaaccg cacgaccgta ctgtagacgt gacgatccgc
    11881 cgtattcgta aacatttcga atctacgccg gatacaccgg aaatcatcgc caccattcac
    11941 ggtgaaggtt atcgcttctg cggtgatctg gaagattaat cggctttacc accgtcaaaa
    12001 aaacggcgct ttttagcgcc gtttttattt ttcaacctta tttccagata cgtaattcat
    12061 cgtccgttgt aacttcttta ctggctttca ttttcggcag tgaaaacgca taccagtcga
    12121 tattacgagt cacaaacatc atgccggcca gcgccaccac cagcacactg gttcccaaca
    12181 acagcgcgct atcggcagag ttgagcagtc cccacatcac tccatccagc aacaacagcg
    12241 cgagggtaaa caacatgcta ttgcgccagc ctttcaatac cgcctgcaaa taaataccgt
    12301 tcattaacgc cccaatcaga ctggcgatta tccatgccac ggtaaaaccg atatgttcag
    12361 aaagcgccag caagagcaaa taaaacatca ctaatgaaag ccccaccagc aaatattgca
    12421 ttgggtgtaa acgttgcgcg gtgagcgttt caaaaacaaa gaacgccata aaagtcagtg
    12481 caatcagcag aatggcgtac ttagtcgccc ggtccgttaa ttggtattga tcggctggcg
    12541 tcgtcactgc gacgctaaac gcggggaagt tttcccagcc ggtatcattg cctgaagcaa
    12601 aacgctcacc gagattatta gcaaaccagc tgctttgcca ttgcgcctga aaacctgact
    12661 cgctaacttc ccgtttggct ggtagaaaat cacctaaaaa actgggatgc ggccagttgc
    12721 tggttaaggt catttcgcta ttacgcccgg caggcaccac agaaagatcg ccggtaccgc
    12781 ttaaattcag tgccatattc agctgcaggt tctgcttccg ccagtcccct tcgggtaaag
    12841 ggatatgcac gccctgcccg ccttgctcta acccggtacc gggttcaatg gtcagtgccg
    12901 ttccgttaac ttcaggcgct ttcaccacac caataccacg cgcatccccg acgctaatca
    12961 caataaaggg cttgcctaag atgatatttg gcgcgttgag ctcgctaaga cgcgaaacat
    13021 cgaaatcggc ttttagcgtt aaatcactgt gccagacctg accggtataa atccctatct
    13081 tgcgttcttc cacgttctga ttgccatcaa ccatcaatga ctcaggtaac caaaaatgga
    13141 taaaacttcg tttccgctcc acggttttat cctcttcctg caccgtataa agctcggtca
    13201 caggaatagc gataagcggc ccaacgagtt tttgcggccc gctggtactt tggcgaatcg
    13261 catcttccac atcgctacgg taatcggcac gttcgacaat cacttgccga atcagcatta
    13321 tcggaatcaa caacaacaat actgcaccaa acaaggtggt cattttccag aacagggggg
    13381 atttcaacat agtcttctcc tttgcaatgg cagcaggata cgaaggctat gtgggaagaa
    13441 tttgaagcta tgtgaagtga cggtgaagtc gtagcgaggc cagcacgcca ccttcctgca
    13501 cgttgcgcag cgtgacttcg ccgttaaaca aacgggcgac ctcactgacg aacgccaacc
    13561 ccagaccgct gcttttttgc ccatttgcac gcggcaaaga gtaaaagcgt tcaaaaatac
    13621 gtgacagcgc gtagtcagga ataccactac cggtatccag caccttaagc gtgacgtgtt
    13681 cctgatccac ttcggcgctt agcgttatgc aaccgctctc gggagtaaaa tcgatggcgt
    13741 tatccagtaa attccccagc gcctgatcca gtaacgccgg ttcagcagca acattaacct
    13801 cggtgggcat aacatgcaaa gtgatgtttt tttctgccaa ctgcacggtg cgcgcttcgc
    13861 tgacgcggcg aaataatgcc gccacatcaa cagcagtcag aacgacttcc tgacgattct
    13921 ccagtcttgc ctggcgtagt aacgtttcca ccagcgcctg cattcgcgca ttttgtgtca
    13981 gaatgttgtc agtaaaacga gccactactt caggcggcgg accttcgcgt aaaatttccg
    14041 ccgcgccacg aatcgccgcc agtgggcttt ttagctcatg ggttaacgca taaacatact
    14101 gctcaatata gtttttccct tccagcttca cgcgcatact ttccagcgcc tgcgcgagtt
    14161 tacgcagctc gctactaccg agatcgggaa gaggaacggg cttattgtca gtgacggaat
    14221 cagcatagcg agtgagccgg gcaatggagc ggttgatcca ccaaaccatg cctgcgccaa
    14281 tcaccagtgc aatccccaac aaaatggcgc tggcccataa aattcgccgc tcgctgcgtt
    14341 taatgaccgg agccatcgcc gcgttcggtt tgcctacgct caaaacgcca ataagccgcg
    14401 agccgtccat aatcggcacg gcaacataca tcaccgaact ttcgggatcg gcaggatttt
    14461 gcaacgtgct gcgcgcacca tactgaccac gcaacgttag ccagacgtca ttccagcgcg
    14521 aataatcctg tccaacggct ttatttgccg aatcgaacaa tactttgcca tgcgcatcgg
    14581 tcatatagac atgatattca ttgcgcactt tgttaatgcc accaatattg gcgcgaaacg
    14641 ggcgatgttg tagctgatta aacgcctgcg ccagttgccc atgcgttggg tccccagaga
    14701 gcaaatcggg acgcgccagc tccgccagta acgttgccgt gtcgatcaac gtcccctccg
    14761 ttgctcttcg cacgcccggt ttaacttctt tgacaaaaat agccagtacg aaccaggccg
    14821 ccaccgccac cagtaaaaaa tagcccagca gcaaccgcat gccgatacgc attacaagcc
    14881 cctcaggcta tatcccatgc cgcgatgagt attaatcggt gaaagatcgg ggttgatggc
    14941 gcgcagcttg gcacgcagcg ttttaatgtg ggtatcgacg gtgcgatcgt aggtgtcctg
    15001 cgcatcttcc cacacgctat ccattagttg ctggcgggac cagacgcggc ctggcgactt
    15061 gagtaacgtc ttcagcaata aaaactcata ccgcgtcagc gttaatggcg tgtcaaacca
    15121 gctgatctgc gccgcgggtt cattcaattc aaaatgacca atacggatga cgggagacgg
    15181 cgtcgagaac ttcttcaccc gacgcagtaa ggtgcgcacc ctggcgcaca cttcgcgggg
    15241 tgaaaacggt ttagccacat agtcgtcagc gccaatttcc agcccaagca ggcgatcgac
    15301 ctcttcactt cgggccgtca ggaacagtac aggtaacgcc ggatggagcg ccagtaactg
    15361 gcggcacaat tcaaagccac tgatatcagg caaaccaacg tcgagaatca tgacgtcggg
    15421 aacctgctgg cgagctttat ccagcaccgg caaacctcgc tcaaagacct cgacggcaaa
    15481 accttcctgc tgcaacatgt agaccagcgt gtcggctatc ccttgctcat cttccactaa
    15541 ccagaccgtt tcccgttgca taaatcgcct ctgttattgc cgccacggca tgacaggaac
    15601 cgcgctaatc gcgtttttcg gcgaaccttc tacaactttg tcggagtaag ccagataagc
    15661 gagcgcgttg cgtttggcgt cataaaagcg cacgacctgt aacgacttaa agaccaggga
    15721 cgtgcgtttt ttgaatacta cctcgccctg agctttgccg tttttaatac gatccgacag
    15781 ttcaatcggc ccgacttgct gacaagaaat ggccgcatcg gaggtatctt ctgccaggcc
    15841 caatccccct ttaataccac cggttttcgc ccggctcaca taacaggtga catttttcac
    15901 atcgggatcg tcaaaggctt ccacaacaat tttgtgatcc gggccgatca ttttaaatac
    15961 ggtgtcgacc gaaccaatct cttctgcatg agccaatggc cccagcatta tcaggtttaa
    16021 agacaggatc aaatgcttgt atttcatatt gttaccattt ttatctatta cacgagcaat
    16081 tagttcgtca cggtaaataa catattgatt aagaacaaaa tctcaattct tttatttccg
    16141 tcaagcccta aaacatactc tactaagaaa aaaacactga atgctaaaac agcaaaaaat
    16201 gctattatcc aattacctga tgtcaggtgc tcgttgttga aaggatgagg atattttatg
    16261 gatcaggccg gcattattcg cgacctttta atctggctgg aaggtcatct ggatcagccc
    16321 ctgtcgctcg acaatgtagc ggcgaaagca ggttattcca agtggcactt acagagaatg
    16381 tttaaagatg tcactggcca tgctattggc gcgtatattc gtgctcgtcg tttgtcgaaa
    16441 tcggcggtcg cactacgcct gactgcgcgt ccgattctgg acatcgcgct gcaataccgc
    16501 ttcgactctc aacagacatt tacccgcgca ttcaagaagc agtttgccca gactcctgca
    16561 ctttaccgcc gttctcctga atggagcgcc tttggtattc gcccgccgct acgtctgggt
    16621 gaattcacaa tgccagagca caaatttgtc accctagaag atacgccgct gattggtgtt
    16681 acccagagct actcctgttc gctggagcaa atctctgatt tccgccatga aatgcgttat
    16741 cagttctggc acgattttct cggcaacgcg ccgaccattc cgccggtgct ctacggcctg
    16801 aatgaaacgc gtccgagtca ggataaagac gacgaacaag aggtattcta taccaccgcg
    16861 ttagcccagg atcaggcaga tggctatgta ctgacggggc atccggtgat gctgcagggc
    16921 ggcgaatatg tgatgtttac ctatgaaggt ctgggaaccg gcgtgcagga gtttatcctg
    16981 acggtatacg gaacgtgcat gccaatgctc aatctgacgc gccgtaaagg tcaggatatt
    17041 gagcgatact acccggcaga agacgccaaa gcgggagatc gcccaattaa tctgcgctgt
    17101 gaactgctga ttcctatccg ccgttaacgc tgcagctcat ctaatgcagg ggcgtccaga
    17161 tgcgagatgt cccctgcggt ttcaacgacc cagccagacg ccagccacag gctttcctga
    17221 taatccacgc gcgaaataga acagttacgc agacgtaagc ggcgctctgc ccatgctggt
    17281 aatccgagaa tcgtactcac cagacatccc agtgcaatac catggctcac cagcagcggt
    17341 cggcttccct gcggtaagtc ccggcaagat tccagtgccg cattgacgcg atcgctgagc
    17401 tcctgcattg actcgccttc aggaatacgc ccgtcaacgg tgccattgac cagttgccga
    17461 cgccagttct cttcttcttc ggtcagagaa tcgatatgtc ttttttccag cacacccatg
    17521 tttaattcac gcaggcgaga atcaaagatg atgtcacagc cgcaggcctg ggcgatgatt
    17581 tccgccgtac gccgggtgcg tcctaaatcg ctactgataa tatgcgtaat gccaagctct
    17641 ttggcacggg ttgccacctg catcgcctgt tgctcacctt tggcggtcag cgggctgtca
    17701 gactggccct gaatacgtcg ctcggcgttc cactgcgttt caccgtggcg gactaggtat
    17761 acctgtaaca tgcttttttt ccgtatactg ctgtaacgtt aattttttga gtaatgctga
    17821 ttatgcacca agttgtctgt gcgaccacca atcccgctaa aattcaggcc attctgcagg
    17881 catttcacga gatcttcggc gaaggatcct gccatattgc atccgttgcc gtcgaaagcg
    17941 gtgtaccgga acaacccttt ggcagtgagg aaacgcgcgc tggcgcacga aatcgggtag
    18001 caaatgcccg ccgtttactt ccagaggctg atttttgggt ggcgattgaa gctggcattg
    18061 atggcgacag cactttcagt tgggtggtga ttgaaaacgc cagccagcgc ggcgaggcgc
    18121 gttcggcaac tttgccgtta cctgcggtga ttctggaaaa agtgcgtgaa ggcgaggcgc
    18181 ttggtcccgt gatgtcgcgt tataccggta ttgatgagat tggtcgtaag gaaggggcga
    18241 tcggcgtgtt taccgccggg aaactcactc gcgccagcgt ctatcaccag gcggtgatcc
    18301 tggcgctgag tccgtttcac aatgccgtgt atcaggcatt gtaggacgga taaggcgttc
    18361 acgccgcatc cggcattcgg tgcacgatgc ctgatgcgac gctgccgcgt cttatcaggc
    18421 ctacaaaatc aatcgctttt cagcaacacc tcttccagcc actggcgcag ctccacgggc
    18481 gcggctttca ggctgttaga tccacgcgta atcgtcgcga tgcccgcgcc gagttcattt
    18541 tttaactcac gctgactcat ttcgccacgc aacagctctt cgacaatacg cacgcgagtc
    18601 cccaacgctt cgcgctcatc tggcgtcagc atcaggttta acaacggtaa atggagatcg
    18661 ttttggtagg cattcttaag caggtcgaca aaacgtaacc actcctggtg acgctgttct
    18721 gccatcgctg ctgaataggg tgattgttgg gccataatat gtcgccattg ttagcggggg
    18781 aagcaaaatg cctcccccgg ttgtactcgc taaagagtac gatagcatat cataaacggg
    18841 cggatcagta acgacgtccc cattccgtgg cgctcatcaa cgtcggttta tcccccatga
    18901 aatagcggta gtaagcatca taagccagca cgttcttcac ataaccgcgc gtctcggaga
    18961 acggaatact ctcgacaaat gccacagcgt cgatacgccc ggcgctgttg ccaagccagg
    19021 ttcgcacccg tccaggtccg gcgttataag ctgctgagga gaaaatacgg ttattgccaa
    19081 actgctgata aacatattgc aggtaactgg tgccaatgtt gatgttcgtt tccggatcca
    19141 gcaattgccc agggctgcta taaccaggaa tagagaacat cttcaccgta tgggtcgctg
    19201 taccaggcat aatctgcatc aggccgctgg cccctaccgg tgatttcact ttcggattcc
    19261 aggcgctctc ctgacgggca atcgccatcg catagctttg cgggatctct ttcccactgg
    19321 tgtaacgttt gaaaagatcg ttgtaagcca gcgggaatcg ctcttccaga tgatcccaaa
    19381 gcttcccggc gatcgttgcc tgaacgctaa gatcccacca ttggttattg aaagcatacc
    19441 gagccagttg agcctgctct gtttttgact tgctcttcac cagattggcc cactcgctac
    19501 gcgcggtatt atcgagattc cagtacatca actcgcgcac gcgcgccatc tccggcccct
    19561 gagtcagggt gctgtcaaca ttctgcggcg ctttatcaat cttcagctca tactcttcac
    19621 cgatgcgttg tgctgcaacc atcgggtaga aaccacgctg ttgcatgagt tgatgcaaaa
    19681 tctctttcgc ttcagcttca cgtccgcgtt ccagcaataa atccgcctgc cagtaacgcc
    19741 attcatcttt ctcttttgct tccatcggca gacgcgccag ccaggtattc aggccgcgac
    19801 gatcgccggt gccaagcgcc attcgcacac ggcgttcaat caacgacgtg gattgcgagc
    19861 gcataatggc gtcatcgcgc catttcgcct gctcatcggt gacatcattg cccatcaaac
    19921 gccaggcgac gatatcgcgc agctcctgaa tctgatcttc attaagctgc tgcgcctggg
    19981 caagcgacgg gatcatcagc cgtgcatttt cagcatcctg ccgcgccaca ctggcaaacg
    20041 ccaccgccgc catttgacgg gtaaaatcgg tcgcgccggt tgtacgcgcg aaggtcagta
    20101 ccgtattagg gttgttcgcc agtgaaatga ttgccgaggc gatagtctgg taatcggcag
    20161 gcatctgccc tgccagcact gttaccaggc ctgtgttacc cgctttcatc gccagacgga
    20221 tacgctctaa atacgccagc ggatcttgtt tacctgacgc acgccagacg ctaaataact
    20281 tgtcacaggc gttaggctgg ctcttgccgg ttagccgcag ctctttcgcc ccttgccagg
    20341 cttcttcact ctgcccggtg ttccatttcg catagtagta attacattgc gcttcggtag
    20401 ttccgggctt ttccgggcta aaggctaaca agccacgcca gtcttcacgc cgcgccagtt
    20461 cattgacgaa acgagattgc agcgtgcgag cgggaggaag cgtggggtta gcgcgaacaa
    20521 agttagtgac cgtcaccgcc ggttgattca tcaggtcatc ggtgatctgg cggtattcca
    20581 ggtagggata aagcggataa tccttcagtc caggcatcat ttgttcgacc acatccatct
    20641 gtcgattatc ccaggcctgc ttgatttgcg cgtaacggct acgctgctca tccagtgagt
    20701 cggctcgcgc cacgctgctg accgtcagca gacagacacc ggcagccaac agccgccagg
    20761 taacttgttt ggctttttcc acaagcgcat cctctaagtg taaatacatc aatgcagcgt
    20821 catgccgcgt aatagattta tgctaaccag tcattgccgt ttacgccacg ttacggacac
    20881 ttttttactt ttactgcgaa ggtgatcgac caactgggat taggcgggga aacaggctac
    20941 acttcgcctt tgaaaactca tcatcacgat aaacatagag gcgaagtcca acgtggctca
    21001 attcgtttat accatgcatc gtgtcggcaa agttgttccg ccgaaacgtc atattttgaa
    21061 aaacatctct ctgagtttct tccctggggc aaaaattggt gtcctgggtc tgaacggcgc
    21121 gggtaagtcc accctgctgc gcattatggc gggcattgat aaagacatcg aaggtgaagc
    21181 gcgtccgcag ccagacatca agattggtta tctgccgcag gaaccgcagc tgaacccgga
    21241 acacaccgtg cgtgagtcca ttgaagaagc ggtttcagaa gtggttaacg ccctgaaacg
    21301 cctggatgaa gtgtatgcgc tgtacgccga tccggatgcc gattttgaca agctggccgc
    21361 tgaacaaggc cgtctggaag agatcattca ggctcacgac ggtcataacc tgaacgtaca
    21421 gctggagcgt gcggcggatg cgctgcgtct gccggactgg gacgcgaaaa tagctaacct
    21481 ctccggtggt gagcgtcgtc gcgtggcgtt gtgccgcctg ctgctggaaa aaccagacat
    21541 gctgctgctc gacgaaccga ccaaccacct ggatgccgaa tccgtggcgt ggctggaacg
    21601 cttcctgcac gacttcgaag gcaccgtggt ggcgattacc cacgaccgtt acttcctcga
    21661 taacgttgcg ggctggatcc tcgaacttga ccgcggtgaa ggtattccgt gggaaggtaa
    21721 ctactcctcc tggctggagc agaaagatca gcgtctggcg caggaagctt cacaagaagc
    21781 ggcgcgtcgt aagtcgatcg agaaagagct ggagtgggta cgtcagggaa ctaaaggccg
    21841 ccagtcgaaa ggtaaagcac gtctggcacg ctttgaagag ctgaacagca ccgaatacca
    21901 gaaacgtaac gaaaccaacg aactgtttat tccacctgga ccgcgtctgg gcgataaagt
    21961 gctggaagtc agcaacctgc gtaaatccta cggcgatcgc ctgctgattg atgacctgag
    22021 cttctcgatc ccgaaagggg cgatcgtcgg gatcatcggt ccgaacggcg cgggtaaatc
    22081 gaccctgttc cgtatgatct ccgatcagga acagccggac agcggcacca tcactttggg
    22141 tgaaacggtg aaactggcat cggttgatca gttccgtgac tcaatggata acagcaaaac
    22201 cgtttgggaa gaagtttccg gcgggctgga tattatgaag atcggcaaca ccgagatgcc
    22261 aagccgcgcc tacgttggcc gctttaactt taaaggggtt gatcagggta aacgcgttgg
    22321 tgaactttcc ggtggtgagc gcggtcgtct gcatctggcg aagctgctgc aggttggcgg
    22381 caacatgctg ctgctcgacg aaccaaccaa cgacctggat atcgaaaccc tgcgcgcgct
    22441 ggaaaacgcc ctgctggagt tcccgggctg tgcgatggtt atctcgcacg accgttggtt
    22501 cctcgaccgt atcgccacgc acatcctgga ctaccaggat gaaggtaaag ttgagttctt
    22561 cgaaggtaac tttactgagt acgaagagta caagaaacgc acgctgggcg cagacgcact
    22621 ggagccgaag cgtatcaagt acaagcgtat tgcgaagtaa tgcgtaaaat gccggatgcg
    22681 gcgtgaacgc cttatccggc ctacaaacca agaaatttca atacgttgtg catctccagg
    22741 cctgataaga cgcggtaagc gtcgcatcag gcattgagca ccgaatgccg gatgcggcgt
    22801 gaacaccttt tccggtctac aacagcctta gcatcctcaa tttcgtggcg ggtcacccgt
    22861 gcaggttttt tcaaaccttg tttaatctcg acagcctctt ccagagaggt tttcaactca
    22921 tcaaaaaaac tcattttata cctcgccttt gagcaatttc gtcacggtta tccttgctcc
    22981 cccatcatct cccgcaccag ctccacgcag cgcaggaaac ggctgtcgta atcgtcctct
    23041 tcaacccgca cgaattcgat attgttctct tccagcatct ccaccagcaa gttctggaac
    23101 tctttgcgat ccaccgaact gccgaggctg cgtaaaccat ccgccaccca cggcgtgttg
    23161 ttctccagca ggatcaccag atcgaaacgg tattcatcaa tcagcgcctg cacgaacgga
    23221 tgctcacgcc cttcgtactt tttgcagaac gcctgggtag tgacaaaatc ggtgtcaata
    23281 aacgccactt tattggcgta tttcactgca aaatcaatgt attgtgcgtg gcccaacgcg
    23341 attttatcgt agtcggaata ctgcaatgcg atctcatcac cgccgaggtg tgaaaagaca
    23401 taatcgcgac catattccca cgcactggtg gtattgaaga tattggcaag tttgtttacc
    23461 agggtggatt taccgctcga ctcgccccca aggatcgcca cggtacgcac aaagaacggc
    23521 ttcacttccg taggaatata ttcccagtag cggaacgggt tttcgcggat ctgcgcaccg
    23581 ctgatactca taaaggtacg cttcggatcg accagcaccg tctcgatccc cagatgttcc
    23641 atatactgtg gcgcatcggc ttcttccgag gtgtagatca ggtccggctg gatccccttt
    23701 tcagccataa actttttgat gccgttgctc cacacatccc agccgtgcgg atacggctcc
    23761 atgccctctt cgttgaaggc atgaatgcga atatttttct gatatttaaa ggtttgcaat
    23821 aaccagcgca gacgatccgg caccgtgggc tgctgcgaca tggcactgtc ttcgaacaat
    23881 gcgcggtcgc gggtatcgtc aaaacccata atgatatgca gctcgtcaac ctggctacag
    23941 gcgcgctgga taaggtagat atgtccggta tgcagcgggt agaacttacc gaatacgaca
    24001 ccaatggttt tcttctgccg gggaaactca agccccaaaa aacggtgcaa tgcctccagc
    24061 ttttgcgcgc tggggctttt aattttggca ttcagtaact ggcttaaata ccctttggtc
    24121 ataccgctgg catcagctac ctgctgtagc gtgcagccct gttgcttgat ggcagttttc
    24181 aggtaatcaa atgacgacat atctccctcc gtatctctca ttataagtcg tcgaacacgc
    24241 taagcgcgtc ggagagtttt ttaacgccaa aaatctgcat cccttccggc gcttttttcg
    24301 gtacgttagc cgccggaaca atcgcccggc gaaaaccgtg tttcgccgct tcagagattc
    24361 gttcctgccc gctgggcacc gggcggatct cccctgccag cccgacttca ccaaacacca
    24421 ccagatcctg tggcagcggt ctgtcacgca ggctggaaac catcgccagc agtaacgcta
    24481 aatcggcact ggtttctgtc accttcacgc cgccgaccac gttcacaaac acatcctgat
    24541 cggccatttg cagaccaccg tgacggtgca agacagccag caggatcgcc agacggtttt
    24601 gctccaaacc taccgccacg cggcgcggat tcgccatcat cgagtgatcg accagcgcct
    24661 gaatctccac cagcaacgga cgcgttcctt cccacaccac catcacggag ctgccggagg
    24721 tcacttcatc tccgcgactt aagaaaattg ccgaagggtt gctgacttca cgcagcccct
    24781 gttcggtcat cgcgaagacg cccagctcat tcaccgcgcc gaagcggttt ttatggctgc
    24841 gcaaggtgcg aaaacgggag tcggcatcac catccagaag caccgaacag tcgatacagt
    24901 gttccagcac tttagggcca gccagcgagc catctttggt tacgtgcccc accatgacaa
    24961 tcgccacacc gcgcgttttg gcgaagcgcg tcagataagc cgctgtttca cgcacctgcg
    25021 ccacactgcc aggcgatgat tgtatatccg ccatatgcat cacctgaatg gagtcaatta
    25081 ccatcagctt cggttgctct tcttcggcaa tcaggcagat ctgttcgatg ctggtttccg
    25141 acaacatatt gagattgtca gtcggcaggc caaggcgatg agcgcgcatt gccacctgtt
    25201 gcagcgactc ttcgccggtg acatacagcg ttttcatctg ctgggccagt ttgcacagcg
    25261 tttgcagtag cagcgtggat ttccccgcac cagggttacc gccaatcaga atggcacttc
    25321 ctggcaccac gccgccgcct agtacgcggt cgaactcttt aaatccggtg gaaaaacgcg
    25381 gcagctcttc aaggctgata tcggaaagtt tctggacttt tgccacccca gcgctaccgg
    25441 catagccact gagacgctcg ttacgcgcca ccgttggcga cgcagcaaga cgcacctcgg
    25501 tgatggtgtt ccaggcatga caggcactgc actgcccctg ccagcgcgga taatcggccc
    25561 cgcattcatt acaaacaaag gcgcgttttg gagcttttgc cacggtgtac ctcgttaatg
    25621 ctgtgccgcc cgcaggatgg cgggcgagca attacttctg attcaggctg cctgagagga
    25681 tgcagaatac ccccatcagg tcagcgtgac ggatggtgac ttccgccttt tcattcactt
    25741 ttggcttggc atggtaggca atccccagcc ctgccgcttt gatcatcggc aggtcattgg
    25801 ctccatcgcc aatcgccacg gtctgcgcca gcgggatttc atactcctgc gcgaggcggg
    25861 tcagagtttt cgctttgtac tgcgcgtcta cgatgtcgcc gatcacattg ccggtaaatt
    25921 taccgtccat gatctccagt tcattggcta ccacggctgt caggcgcagc ttgtcgcgca
    25981 ggtattcagc aaagaaagta aagccgccgg aggcaatcgc cactttccag cccagcgttt
    26041 ccagcttgag caccagttgc gttaagcctg gcatcagcgg cagattttca cgcacctgtt
    26101 gcagaatatt ggcgtcagcg cctttcagcg tcgccacacg gctgcgcagg ctggcggtaa
    26161 aatcgagttc gccgcgcatc gcccgttcgg ttacttccgc caccatctcg cccgttccgg
    26221 ccagtttggc aatttcatca atacattcaa tctggatggc ggtggaatcc atgtccatca
    26281 ccagcaaacc cggcgtgcgc aggtgcggga ttttccccag cggcgcgaca tccagttgcg
    26341 cttcatgggc caggcgcgta gcgcgcgcgg tgagtgaacc tgccagacga atcacctgat
    26401 aatcttccac gcaccaggcg gcaacaatca ccatcgccgc gcccagtttg ctttggtatt
    26461 gggtcagacg ttgtttatcc agcccacgac catacagcag ccagccgcta cgacctgcgt
    26521 ggtaatccag tggcatcact tcatcaccac ttaatgaaag aggcagacca ggccataaag
    26581 agacatcttc aggcaggtcg caccaggtaa tgttaggcat taaggctcct gtaaaatcgt
    26641 tcgaagcagg gaaaataacg catgaggcta ccttgtatcc attgcttctg gcaacattaa
    26701 gtctcaaatt ttcaaagggt ggaagatggc tcgcacaaaa ctgaaattcc ggctgcatcg
    26761 ggcagtgatt gtcctgttct gtcttgcctt gttagtggcg ctgatgcagg gagcgtcatg
    26821 gtttagtcaa aaccaccagc gacagcgtaa tccacagttg gaagaactgg cccgcaccct
    26881 ggcgcgtcag gtgacgctga acgttgcacc gctgatgcgt accgactcac cggatgaaaa
    26941 acgcattcag gcgatccttg atcagttaac ggatgaaagc cgtatcctcg acgcgggcgt
    27001 gtatgacgaa caaggcgatc ttatcgcacg ttctggcgaa agcgtcgaag tgcgcgaccg
    27061 gctggcgctc gacggtaaaa aagcgggcgg ttattttaac cagcagattg tcgaacccat
    27121 ttcggggaaa aacggaccgc tcggctatct gcgcctgacg ctcgacaccc atacgctcgc
    27181 caccgaagcc caacaggtgg ataacaccac taacatttta cgcctgatgt tgctgctctc
    27241 gctggcaatc ggcgtagtgc tgacccgcac gctgctacag ggtaaacgta cccgctggca
    27301 gcaatcgccc ttcctgttaa ccgccagcaa accggtgccg gaagaggaag aaagcgagaa
    27361 aaaagagtga cccattacta caagaaagga aatcgttatg tccacattac gcctgctcat
    27421 ctctgactct tacgacccgt ggtttaacct ggcggtggaa gagtgtattt ttcgccagat
    27481 gcccgccacg cagcgcgttc tgtttctctg gcgcaatgcc gacacggttg tgattggtcg
    27541 cgcgcagaac ccgtggaaag agtgtaatac ccggcggatg gaagaagata acgtccgcct
    27601 ggcgcggcgc agtagcggtg gcggcgcggt gttccacgat ctcggcaata cctgttttac
    27661 ctttatggct ggcaagccgg agtacgataa aaccatctcc acgtcgattg tgctcaatgc
    27721 gctgaacgcg ctcggcgtca gcgccgaagc gtccggacgt aacgatctgg tggtgaaaac
    27781 caccgaaggc gaccgcaaag tctcaggctc ggcctatcgc gaaaccaaag atcgtggctt
    27841 ccaccacggc accttgctgc tcaatgccga ccttagccgc ctggcaaact atctcaaccc
    27901 agataaaaag aaactggcgg cgaaaggcat tacctcagtg cgttcccgcg tgaccaacct
    27961 caccgagctg ttgccgggga tcacccatga gcaggtttgc gaggccataa ccgaggcctt
    28021 tttcgcccat tatggcgagc gcgtggaagc ggaaatcatc tccccggaca aaacgccaga
    28081 cttgccaaac ttcgccgaaa cctttgcccg ccagagtagc tgggaatgga acttcggtca
    28141 ggctccggcg ttctcgcatc tgctggatga acgctttacc tggggcggcg tggaactgca
    28201 tttcgacgtt gaaaaaggcc atatcacccg cgctcaggtg tttaccgaca gcctcaaccc
    28261 cgcgccgctg gaagccctcg ccgggcgact gcaaggctgc ctgtaccgcg cggatatgct
    28321 gcaacaagag tgcgaagcgc tgttggttga cttcccggac caggaaaaag agctacggga
    28381 gttgtcggca tggatggcag gggcggtaag gtaactcgct gattaaaata tccagggaag
    28441 gaaatatgat cgatctggaa aaccaggaac gggagattat caatttaatg ttcagccagc
    28501 gtatttcctg gctagccgcc gtgcgtatca ggcataaatt atcgcttgct gaagtaagta
    28561 aaatgttagg tatctcgatt aattctctaa aacagatcga aaagacggaa cggcttagct
    28621 caaacatcaa aagcaaaatg gcagaaattt atggttgtcc accagagttg ctgatatgcc
    28681 cttcctggat gacggctgaa cataaatgaa tagattcgtg aatagatact aaaaagccgg
    28741 agcagtctcc cactccggct tcacacgaca atcgcctttc agcgaaacac aattactctt
    28801 tatcgcccag cagaacggat tccagtgcga ttttgatcat gtcgttgaag gtggtctgac
    28861 gctcagcggc agtggtctgc tcgtgagtgc ggatgtggtc agacacggta cagatggtca
    28921 gggctttcgc gccaaattct gcagcgacgc cgtagatacc agccgcttcc atttccacgc
    28981 cgagaatgcc gtatttttcc atcacgtcga acatttcgcc gtccggagag tagaacaggt
    29041 cagcggagaa caggttacca acgcgagcat caatgcccag tgcgttagct gcatctactg
    29101 cgttacgcgc catgtcaaag tcagcgatag ctgcaaagtc atggtcttta aaacggatgc
    29161 ggttaacttt ggaatcggtg caggcaccca taccgataac gacgtcgcgc agttttacgt
    29221 gcggcagaac tgcgccacag gaacccacgc ggataatttt cttcacgccg aaatcggtga
    29281 tcagttcttt ggtgtagatg gagcaggacg ggatacccat accgtgaccc atgacggaaa
    29341 ttttgcgacc tttgtaagta ccggtgaagc ccagcatacc gcgaacgttg ttcacttcac
    29401 gggcatcttc aaggaaagtt tcagcaatat actttgcacg cagcgggtcg cctggcatca
    29461 aaactacgtc agcgaaatcg cccatttctg cattaatgtg tggggtagcc attgttttat
    29521 ccttatctac atgttttcac cctctccctg agggagaggg tcggggtgag ggcatcaagc
    29581 cgcacccatt atcagaacat ggctttgcca tattccatat cagaagtacc aaaatatttt
    29641 gccagagtct ggccgatatc cgcgaaggtt tcacgatgac ccagtgagcc cggttttact
    29701 ttcgggccat ataccagtac cggaatgtgt tcacgcgtgt ggtcagtacc ggtccaggtc
    29761 ggatcgcaac cgtggtcagc ggtgaggatc aggatgtcgt catcgcgcag cagagacatc
    29821 agctccggca gacggcggtc gaacagttcc agacccgcgg cataaccggc gacgtcgcga
    29881 cggtggcccc aggaagagtc gaagtcaacg aagttggtga agacgatggt gttatcaccc
    29941 gcttctttca tctctttgat ggtggcgtca aacagcgcgt ccaggccagt cgctttcact
    30001 tttttggtga taccgcagtt ggcgtagatg tccgcaattt taccgacaga aaccacctga
    30061 ccgtgttttt catcaaccag tttctgcagc acggtcggtg ctggcggctc aacagccagg
    30121 tcgtgacggt taccggtacg ctggaagtta ccggctttgt cgccgataaa cggacgagcg
    30181 ataacacgac cgatattgta gccgccgttg gtcagctctt cacgggcgat ttcgcacagt
    30241 tcgtagagtt tatccagacc gaaagtttct tcatggcagg caatctggaa cacggagtca
    30301 gcggaggtat agaaaatcgg cttgccggtt ttcatgtgct cttcgcccag ttgatccaga
    30361 atgaccgtac cggaagagtg gcagttaccg aggtaacccg gcagattagc gcgttcgacc
    30421 agtttatcca gcagctcttg cgggaagctg ttttcgtgat cggagaaata tccccactca
    30481 aacagaaccg ggacaccggc gatttcccag tgaccagacg gggtatcttt accggatgac
    30541 atttcgtgcg cccatgcgta cgcgccgata acttcagcgt tgccgtccat tcccgccgga
    30601 atgaaaccgg tagaaccttc gtgtgctttc gccagcccca gacgggtcag atttggcaga
    30661 ttgagcgggc ctttacgacc gttatcagct tcgcctttgg cacaagcttc tgcgatatga
    30721 cccaaggtgt cagccccgac gtcaccaaag cgttctgcat cttctgtagc gccgatgccg
    30781 aatgagtcca gcaccataat aaatgcacgt ttcatatgtt ctccgtactc agtgcttcaa
    30841 atttaaatga tcagatcagt ataccgttat tcgctgatac ggcgatagac agttggtgtg
    30901 ctttccggtg ctttatcggc aagtttaatt gccgctttca ccgctttcgc cgcttcctgc
    30961 cagctgtttt cgtctttcgc gtggataacc gccagcggac gctgaccgtc tacctggtcg
    31021 cccagacgtg ccatatcagt aaagccgacg ctgtaatcga tggtgtcaga tgcctgacgg
    31081 cgtccgccgc ccattgcaac cactgccatc cccagcgcgc gggtatccat ttcactgaca
    31141 aaaccttcgg tatcagcata gactgctttc gtcagcatcg ctgtcggcag atacttcgcg
    31201 tagttctcaa cgaagtcggt tgggcctttt tgtgccgcta ccatacgacc aaagacttct
    31261 gccgctttac cgttgtccag caccgcctgc aatttcgcgc gcgcttcggc gtcatctttc
    31321 gccagtttgc cggagatcag catctccaca cacagcgcca tcgtgacatc aaacagacgc
    31381 gggttacgat attcacccgt caggaactgc accgcttcac gaacttcaac cgcgttacct
    31441 gcactggagg ccagtacctg attcatgtcg gtgagcagcg cggtggtgcg cacgccagcg
    31501 ccgttagcca cgccaacaat cgcttcggca agggcttcag agagttcgta ggtcggcata
    31561 aacgcgccgc tacccacttt cacgtccatc accagcgcgt ccagaccttc cgccagtttc
    31621 ttcgccagaa tcgaggcagt gatcagcggg atggagtcca cggttgcggt aatatcgcgg
    31681 gtcgcgtaga aacgtttatc cgccggagcc agtgagctgg tctgaccgat aatcgccacg
    31741 ccgacgtctt taataatttc gcggaaacgg ttgtcatccg ggaaaatgtc gaagccaggg
    31801 atggattcca gtttgtcgag cgtaccgcct gtatgaccga ggccgcgacc ggagatcatc
    31861 ggaatatagc cgccgcaggc tgcgaccatc ggccccaaca tcagcgaagt cacatcgccg
    31921 acgccaccgg tggagtgttt atcaacaatc gggccattca gatgcaggct tttccagtcg
    31981 agaacggttc ctgaatctcg catcgccatg gtcagcgaga cacgctcagg cattgtcata
    32041 tcgtggaaga aaatggtcat cgcgagggcg gcaatctgcc cttcggagat agtgttgtcg
    32101 cgaataccgt tgataaagaa acgaatttct tcatcgctca gcgcatgacc atcacgtttt
    32161 ttacgaataa tttcttgtgc gagaaacaag gtaacctccc gtggaaaaga gtatgaggcg
    32221 gcttttgccg gatgcgtcta cgccttatcc ggcctacggg tagatacgtc tcgtaggcct
    32281 gataagcgca gcgcatcagg cgtaaagcat cttacttagt agttgctggc gctcttaccg
    32341 tcgccgtgac ccagcgcttt cagcaggctt gccagcaggc tggaagcacc aaagcggtag
    32401 tgacgcgcat ctgcccagtc agcaccgaac agttcatctg cgatggcgag atatttctgc
    32461 gcatcttccg cagtacgcac gccgcccgcc ggtttgaaac caacggtttt ttctacgccc
    32521 atatcacgga tcacttccat catgatgcgc gcgctttccg gcgtcgcgtt cacagccact
    32581 ttaccggtag aggttttgat gaagtccgca cccgctttga tggagatttc agacgcttta
    32641 cggatcagcg cttcgtcttt cagttcgccg gtttcgatga tcactttcag cagtacattc
    32701 gctgccgcgc aagcctcttt acaggctttc accaggtcaa aaccaacctg ctcgttaccc
    32761 gccatcagcg cgcggtacgg gaacacaacg tcaacttcat cagcaccgta ggcgattgcc
    32821 gcacgggttt ctgccagcgc gatttcgatg tcatcgttac cgtgtgggaa gttggttacc
    32881 gtagcgattc ggatttccgg ggtgccctgc tctttcagcg ttttgcgagc aatcgggata
    32941 aagcgaggat agatacagat agcggcggta ttgccgaccg gggttttggc ctgatgacac
    33001 agagcaatta ctttctcgtc ggtgtcgtcg tcattcaggg tggtcaggtc catcaatttc
    33061 agtgcacgca ggctgcttgc tttcagatca gtcatttcat tctcctggct tgtcgccaat
    33121 aaaattcacc ttgcgagttt gttagtattc taacatcaac ttcgcaacac acttcgatat
    33181 acatcacaat taaggaaatc tacttacaag tttgcatcac tgtaatgcga tctggttcaa
    33241 ataattcact ttcaaatgaa tgcgtcagtg atggcaaacg catcaggatc aaagtgaaca
    33301 tcacgaaact tcttacaatg gcgcatcacc ttcggcataa aaggaaaaga agatgcccac
    33361 ttctcatgaa aatgcactgc aacaacgttg ccagcaaatt gtcaccagcc cagtgcttag
    33421 cccggagcag aagcgccatt ttctggcaca ggaagcagaa aacaatctgc cttacccaca
    33481 gttgcctgcc gaagcccgcc gcgcgctgga tgaaggtgta atctgcgata tgtttgaagg
    33541 tcatgcaccg tacaaaccgc gctatgtctt acccgattac gcccgttttc tggcgaacgg
    33601 ttccgaatgg ctggagctgg aaggcgcgaa agatcttgat gacgcactct ctctgctgac
    33661 cattctttac caccacgtac cgtcggtcac atcgatgccg gtctacctgg ggcaactgga
    33721 tgcgttgttg caaccgcatg ttagaattct aacacaagac gagatcgatg ttcgaataaa
    33781 acgtttctgg cgttacctcg acagaaccct gccagacgcc tttatgcacg ccaatatcgg
    33841 cccgtctgat tcgcccatta cccgtgcaat cttacgtgca gacgcagagt tgaagcaggt
    33901 ttcaccgaac ctgaccttta tctacgatcc tgaaatcacc cctgatgacc tgctgctgga
    33961 agtggcgaag aacatctgtg aatgtagcaa accgcacatc gccaacggtc cggtgcatga
    34021 taaaattttc acaaaagggg gctacgggat tgtgagctgt tacaactcac tgccgctggc
    34081 gggtggtggc agcacgctgg tacgccttaa cctgaaagcc attgccgagc gcagcgaatc
    34141 gctggatgac ttctttacgc gcactctacc gcactactgc cagcagcaga tcgccatcat
    34201 cgatgcgcgg tgtgaattcc tctatcaaca atcacacttc tttgagaata gcttcctgat
    34261 gaaagaaggg ctgattaacc ctgaacgttt tgtgccaatg tttggcatgt atgggctggc
    34321 ggaagcggtt aacttgctgt gtgagaaaga agggattgcc gcgcgctacg gtaaagaagc
    34381 cgccgcaaat gaagtgggtt atcgcatcag cgcgcaactg gcggagtttg tcgccaatac
    34441 ccccgtgaaa tatggctggc aaaaacgcgc catgttacac gcacagtcgg ggatcagttc
    34501 cgatattggc accacgccgg gcgcgcgttt gccgtatggc gatgagccag atccgatcac
    34561 ccatctgcaa actgtcgccc cgcatcatgc ttattattat tccggcatca gcgacattct
    34621 gacgctcgac gaaaccatca aacgtaaccc gcaggcactg gtacagcttt gcctcggtgc
    34681 ctttaaagcc ggaatgcgtg aatttaccgc caatgtcagc ggtaacgatc tggttcgcgt
    34741 taccggttat atggtgcgtt tgtcggattt agaaaaatat cgcgccgaag gttcacgcac
    34801 caacaccacc tggctgggcg aagaagccgc acgcaacact cgtattctgg aacgccagcc
    34861 gcgcgtgata agccatgaac agcagatgcg ctttagtcag taagattatc cccttctcct
    34921 gcgttgacgg gccaggcagt cgtctggctc tgtttttgca gggctgcaat ctgcgctgca
    34981 aaaactgtca caatccgtgg acgatgggac gttgcaatga ctgtggggag tgcgtgccac
    35041 agtgtccgca tcaggcgttg cagattgttg acggcaaagt ggtgtggaac gctgtggtct
    35101 gcgagcaata tgatacctgc ctgaagaggt gtccgcaaca tgccacgccc atggcgcaat
    35161 ccatgagcgt ggatgaggtg cttagccata tccgcaaagc ggtgctgttt attgaaggga
    35221 taacggtgag tggcggtgaa gccacgaccc aactgccgtt tgtagtggcg ctgtttactg
    35281 ctatcaaaaa cgatccgcaa ctgcgccatc tcacctgtct ggtggacagt aacggcatgt
    35341 tgagcgaaac cggctgggaa aaattactcc cggtgtgtga cggcgcaatg ctcgatctca
    35401 aagcgtgggg gagcgaatgt catcaacact taaccggacg cgataatcag cagattaagc
    35461 gcagcatctg tttgcttgca gagcgcggca agctggcgga actgcgtttg ctggtaattc
    35521 cagactaggt ggattatttg catcacatcg atgagctggc gacgtttatc aagagacttg
    35581 gcgatgttcc ggttcgcctg aatgcgtttc atgcccacgg cgtgtatggc gaggcgcaaa
    35641 gctgggcgag cgccacgccg gaagacgttg agccgttggc tgatgcgtta aaggtgcgcg
    35701 gggtgagccg gttgatattt ccggcgctct atttgtgaca tgccggatac ggcctacggt
    35761 tcggcacaga cttgtaggtc tgataagacg cgacaagcgt cgcatcaggc attatgcgcc
    35821 gactgccgga tgcggcgtga acgccttatc cggcctacgg ttcggcacag acttgtaggc
    35881 atgataagac gcgtcagcgt cgcatcaggc attatgcgcc aactgccgga tgcggcgtga
    35941 acgccttatc cggcctacgg ttcggcacag acttgtaggc atgataag
//
LOCUS       DAJVTL010000028        34548 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.028, whole genome shotgun sequence.
ACCESSION   DAJVTL010000028 DAJVTL010000000
VERSION     DAJVTL010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34548
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.028"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(17..865)
                     /gene="pdxK"
                     /locus_tag="OQQ26_001343"
                     /gene_synonym="thiJ"
     CDS             complement(17..865)
                     /gene="pdxK"
                     /locus_tag="OQQ26_001343"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HCS1856848.1"
                     /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
                     NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQ
                     IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
                     FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVSADSVNVI
                     SHSRVKTDLKGTGDLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQHESDELIL
                     PPLAEA"
     gene            970..1338
                     /locus_tag="OQQ26_001344"
     CDS             970..1338
                     /locus_tag="OQQ26_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HCS1856849.1"
                     /translation="MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLAQKKDLIF
                     VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKMPGKSDE
                     NAQPFLHALIAQTDKTVPAQ"
     gene            complement(1341..2252)
                     /gene="cysM"
                     /locus_tag="OQQ26_001345"
     CDS             complement(1341..2252)
                     /gene="cysM"
                     /locus_tag="OQQ26_001345"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HCS1856850.1"
                     /translation="MSTLEQTIGNTPLVKLQRMGPNNGSEVWLKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
                     QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
                     GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(2386..3483)
                     /gene="cysA"
                     /locus_tag="OQQ26_001346"
     CDS             complement(2386..3483)
                     /gene="cysA"
                     /locus_tag="OQQ26_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter ATP-binding
                     protein CysA"
                     /protein_id="HCS1856851.1"
                     /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQTSGHIRFHGTDVSRLHAWDRKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
                     DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
                     DAPEQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
                     PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE
                     RLFVGLQHARLYNGDERIETRDEELALAQSA"
     gene            complement(3473..4348)
                     /gene="cysW"
                     /locus_tag="OQQ26_001347"
     CDS             complement(3473..4348)
                     /gene="cysW"
                     /locus_tag="OQQ26_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HCS1856852.1"
                     /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVISGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEEHHEH"
     gene            complement(4348..5181)
                     /gene="cysT"
                     /locus_tag="OQQ26_001348"
     CDS             complement(4348..5181)
                     /gene="cysT"
                     /locus_tag="OQQ26_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HCS1856853.1"
                     /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW
                     AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
                     H"
     gene            complement(5181..6197)
                     /gene="cysP"
                     /locus_tag="OQQ26_001349"
     CDS             complement(5181..6197)
                     /gene="cysP"
                     /locus_tag="OQQ26_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate/sulfate ABC transporter
                     substrate-binding protein CysP"
                     /protein_id="HCS1856854.1"
                     /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKL
                     IPADWHSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSLQA
                     QTIITDYYYRVNNTEVMDKLKNKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
                     AGRN"
     gene            complement(6368..7159)
                     /gene="ucpA"
                     /locus_tag="OQQ26_001350"
     CDS             complement(6368..7159)
                     /gene="ucpA"
                     /locus_tag="OQQ26_001350"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311324.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HCS1856855.1"
                     /translation="MGKLTGMTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
                     LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
                     DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTDMAKAIPL
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
     gene            complement(7288..8145)
                     /gene="murR"
                     /locus_tag="OQQ26_001351"
     CDS             complement(7288..8145)
                     /gene="murR"
                     /locus_tag="OQQ26_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MurR"
                     /protein_id="HCS1856856.1"
                     /translation="MLYLTKIRNAESEFTGNEQKIADFLRANVSELKSVSSRKMAKQL
                     GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLQSSITSDDSLEVIA
                     RKLNREKELALEQTCALFDFARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI
                     GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSL
                     ADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQR
                     SSELTQRLK"
     gene            8309..9205
                     /gene="murQ"
                     /locus_tag="OQQ26_001352"
     CDS             8309..9205
                     /gene="murQ"
                     /locus_tag="OQQ26_001352"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HCS1856857.1"
                     /translation="MQLEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPLAVERV
                     LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
                     EYAIQHAVEGAEDCREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
                     TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
                     VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
                     AAEAKKRLDQHGGFIRQVLDKE"
     gene            9209..10633
                     /gene="murP"
                     /locus_tag="OQQ26_001353"
                     /pseudo
     CDS             9209..10633
                     /gene="murP"
                     /locus_tag="OQQ26_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416924.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylmuramic acid transporter subunit
                     IIBC"
     gene            10638..11942
                     /gene="pbp4b"
                     /locus_tag="OQQ26_001354"
     CDS             10638..11942
                     /gene="pbp4b"
                     /locus_tag="OQQ26_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
                     /protein_id="HCS1856858.1"
                     /translation="MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMD
                     RWISQQVDAGYPGVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLAS
                     NTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGG
                     FPADPQYPNKAVAGALYSQDKGQTLEMIKHTPLEYQPGSKHIYSDVDYMLLGFIVESV
                     TGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTS
                     TLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMF
                     TTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVIVIDPVNHMAIVML
                     SNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK"
     gene            complement(12000..12899)
                     /gene="yfeX"
                     /locus_tag="OQQ26_001355"
     CDS             complement(12000..12899)
                     /gene="yfeX"
                     /locus_tag="OQQ26_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311329.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HCS1856859.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
                     EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGMDAGGSYVFVQRWEHNLKQLNRMSVHDQEIMIGRTKETNEEIDGDERPETSHLTR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LRFTKPVTGGYYFAPSLDKLMAL"
     gene            complement(12995..13570)
                     /locus_tag="OQQ26_001356"
     CDS             complement(12995..13570)
                     /locus_tag="OQQ26_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HCS1856860.1"
                     /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
                     GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG
                     TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
                     QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR"
     gene            complement(13631..14080)
                     /locus_tag="OQQ26_001357"
     CDS             complement(13631..14080)
                     /locus_tag="OQQ26_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311331.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HCS1856861.1"
                     /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWGLFVIAGASR
                     EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVL
                     LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE"
     gene            complement(14067..14492)
                     /locus_tag="OQQ26_001358"
     CDS             complement(14067..14492)
                     /locus_tag="OQQ26_001358"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311332.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="HCS1856862.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
                     FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQINVPEDNDMVLGMYERLGYEHADVLSLGKRLIEDEEY"
     gene            14706..15575
                     /gene="amiA"
                     /locus_tag="OQQ26_001359"
     CDS             14706..15575
                     /gene="amiA"
                     /locus_tag="OQQ26_001359"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HCS1856863.1"
                     /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
                     HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
                     RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
                     HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
                     HWFDNQKAHSKKR"
     gene            15579..16478
                     /gene="hemF"
                     /locus_tag="OQQ26_001360"
     CDS             15579..16478
                     /gene="hemF"
                     /locus_tag="OQQ26_001360"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HCS1856864.1"
                     /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG
                     RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
                     PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY
                     PRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
                     RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DYQPKDGSPEAALSEFIKVRDWV"
     gene            complement(16412..17536)
                     /gene="eutR"
                     /locus_tag="OQQ26_001361"
     CDS             complement(16412..17536)
                     /gene="eutR"
                     /locus_tag="OQQ26_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001735543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HCS1856865.1"
                     /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA
                     LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD
                     RVLHMLRSQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG
                     AMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNTVRRELISPWSQSTTVKDAAMQWGFWHLGQFATDYQQLF
                     AEKPSLTLHQRMREWGGGSYTQSLTLINSLNAASGLPSFG"
     gene            complement(17582..18082)
                     /gene="eutK"
                     /locus_tag="OQQ26_001362"
     CDS             complement(17582..18082)
                     /gene="eutK"
                     /locus_tag="OQQ26_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311336.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutK"
                     /protein_id="HCS1856866.1"
                     /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
                     VVEGDLAACRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVKEPD
                     APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
                     YRLKPH"
     gene            complement(18095..18754)
                     /gene="eutL"
                     /locus_tag="OQQ26_001363"
     CDS             complement(18095..18754)
                     /gene="eutL"
                     /locus_tag="OQQ26_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HCS1856867.1"
                     /translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
                     DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
                     MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
                     GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
                     A"
     gene            complement(18764..19648)
                     /gene="eutC"
                     /locus_tag="OQQ26_001364"
     CDS             complement(18764..19648)
                     /gene="eutC"
                     /locus_tag="OQQ26_001364"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit beta"
                     /protein_id="HCS1856868.1"
                     /translation="MDQKQIEEIVRSVMASMGQAAPAPSEAKCATTNCAAPVTSESCA
                     LDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRS
                     KDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANDV
                     QVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGA
                     KVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIV
                     DLAKRMLEQKASGINMTR"
     gene            complement(19669..21030)
                     /gene="eutB"
                     /locus_tag="OQQ26_001365"
     CDS             complement(19669..21030)
                     /gene="eutB"
                     /locus_tag="OQQ26_001365"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit alpha"
                     /protein_id="HCS1856869.1"
                     /translation="MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQER
                     VAAKQVLSEMTVADIRNNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLS
                     DETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSAR
                     LQPNDTRDDVQGIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNI
                     PTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFN
                     RIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPEY
                     LYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIM
                     GMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPS
                     LFF"
     gene            complement(21042..22406)
                     /gene="eutA"
                     /locus_tag="OQQ26_001366"
     CDS             complement(21042..22406)
                     /gene="eutA"
                     /locus_tag="OQQ26_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HCS1856870.1"
                     /translation="MNTRQLLSVGIDIGTTTTQVIFSHLELVNRAAVSQVPRYEFIKR
                     EISWQSPVFFTPVDKQGGLKEAELKSLILEQYQAAGIAPESVDSGAIIITGESAKTRN
                     ARPAVMALSQSLGDFVVASAGPQTLSEQRLCRVLNIDIGGGTANYALFDAGKISGTAC
                     LNVGGRLLETDSQGRVVYAHKPGQMIVDECFGAGTDARSLTGAQLVQVTRRMAELIVE
                     VIDGTLSPLAQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADPFCFADIGPLLATA
                     LHDHPRLREMNVQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQLPLRNLPVAIPIDE
                     TDLVSAWQQALLQLDLDPKTDAYVLALPASLPVRYAAVLTVINALVDFVARFPNPHPL
                     LVVAGQDFGKTLGMLLRPQLQQLPLAVIDEVIVRAGDYIDIGTPLFGGSVVPVTVKSL
                     AFPS"
     gene            complement(22403..23629)
                     /gene="eutH"
                     /locus_tag="OQQ26_001367"
     CDS             complement(22403..23629)
                     /gene="eutH"
                     /locus_tag="OQQ26_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutH"
                     /protein_id="HCS1856871.1"
                     /translation="MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEGS
                     GGQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACD
                     MGGFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLA
                     GIVTIPIGCIAGGLVAMYSGVQINGQPVEFTFALILMNMIPVLIVAVLVALGLKFIPE
                     KMINGFQIFAKFLVALITLGLAAAVVKFLLDWELIPGLDPIFMAPGDKPGEVMRAIEV
                     IGSISCVLLGAYPMVLLLTRWFEKTLMSVGKVLNMNNIAAAGIVATLANNIPMFGMMK
                     QMDTRGKVINCAFAVSAAFALGDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLV
                     PKEDATATKTEAEAQS"
     gene            complement(23746..24933)
                     /gene="eutG"
                     /locus_tag="OQQ26_001368"
     CDS             complement(23746..24933)
                     /gene="eutG"
                     /locus_tag="OQQ26_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311342.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization ethanol dehydrogenase
                     EutG"
                     /protein_id="HCS1856872.1"
                     /translation="MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGAVSSCGQQA
                     QTRGLKHLFVMADSFLHQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAAVAQL
                     RESGCDGVIAFGGGSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGT
                     GSETTNVTVIIDAVSGRKQVLAHASLMPDVAILDAALTEGVPSHVTAMTGIDALTHAI
                     EAYSALNATPFTDSLAIGAIAMIGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAG
                     LGLCHAMAHQPGAALHIPHGLANAMLLPTVMEFNRMVCRERFSQIGRALTNKKTDDRE
                     VISVVSELITEVGINKRLADVGATTGHYGAWAQAALEDICLRSNPRTASLEQIIGLYA
                     AAQ"
     gene            complement(24923..25759)
                     /gene="eutJ"
                     /locus_tag="OQQ26_001369"
     CDS             complement(24923..25759)
                     /gene="eutJ"
                     /locus_tag="OQQ26_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HCS1856873.1"
                     /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM
                     VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGLRFSHAATSFPP
                     GTDPRISINVLESAGLEVSHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVT
                     YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGDEIWPAVKPVYEKMADIVARHIE
                     GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY
                     AK"
     gene            complement(25770..27173)
                     /locus_tag="OQQ26_001370"
     CDS             complement(25770..27173)
                     /locus_tag="OQQ26_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HCS1856874.1"
                     /translation="MNQQDIEQVVKAVLLKMQSSDTPSAAVHEMGVFASLDDAVAAAK
                     VAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP
                     GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAP
                     HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGK
                     AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI
                     VVDSVANELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIA
                     AAIGLNVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH
                     TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
                     TFVRLRRCVLVDAFRIV"
     gene            complement(27185..27472)
                     /gene="eutN"
                     /locus_tag="OQQ26_001371"
     CDS             complement(27185..27472)
                     /gene="eutN"
                     /locus_tag="OQQ26_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HCS1856875.1"
                     /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI
                     DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK"
     gene            complement(27579..27872)
                     /gene="eutM"
                     /locus_tag="OQQ26_001372"
     CDS             complement(27579..27872)
                     /gene="eutM"
                     /locus_tag="OQQ26_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HCS1856876.1"
                     /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM
                     VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL"
     gene            complement(27911..28927)
                     /gene="pta"
                     /locus_tag="OQQ26_001373"
     CDS             complement(27911..28927)
                     /gene="pta"
                     /locus_tag="OQQ26_001373"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HCS1856877.1"
                     /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL
                     VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD
                     PLMFAAAMVSAGKADVCIVGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGP
                     ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV
                     QQATEIVRERAPKLLVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG
                     YKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQ
                     TLVE"
     gene            complement(28924..29727)
                     /gene="eutT"
                     /locus_tag="OQQ26_001374"
     CDS             complement(28924..29727)
                     /gene="eutT"
                     /locus_tag="OQQ26_001374"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HCS1856878.1"
                     /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR
                     IKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM
                     VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGD
                     QAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVF
                     ITRSFEVLRSDILQALNRLSSAVYVMMILSVTKPPLTVKQIQQRLGETQ"
     gene            complement(29724..30425)
                     /gene="eutQ"
                     /locus_tag="OQQ26_001375"
     CDS             complement(29724..30425)
                     /gene="eutQ"
                     /locus_tag="OQQ26_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HCS1856879.1"
                     /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
                     ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
                     SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG
                     FMQWENAFFPWTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTTSS
                     VKFLYVAWPANWQSL"
     gene            complement(30400..30879)
                     /gene="eutP"
                     /locus_tag="OQQ26_001376"
     CDS             complement(30400..30879)
                     /gene="eutP"
                     /locus_tag="OQQ26_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HCS1856880.1"
                     /translation="MKRIAFVGTVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT
                     PGEYFSHPRWYHALITTLQDVDMLIYVHGVNDPESRLPAGLLDIGIIKRQIAVISKTD
                     MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
     gene            complement(30892..31227)
                     /gene="eutS"
                     /locus_tag="OQQ26_001377"
     CDS             complement(30892..31227)
                     /gene="eutS"
                     /locus_tag="OQQ26_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HCS1856881.1"
                     /translation="MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLN
                     YTLCEMTKS"
     gene            complement(31518..33797)
                     /gene="maeB"
                     /locus_tag="OQQ26_001378"
     CDS             complement(31518..33797)
                     /gene="maeB"
                     /locus_tag="OQQ26_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HCS1856882.1"
                     /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
                     CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
                     EEARVLHATQELITLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
                     EYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSV
                     VKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFG
                     IEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDR
                     MPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASV
                     RRIVNMVALAVVEAQTQPL"
     gene            34086..>34548
                     /locus_tag="OQQ26_001379"
     CDS             34086..>34548
                     /locus_tag="OQQ26_001379"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCS1856883.1"
                     /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL
                     SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF
                     DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNL"
BASE COUNT         7870 a         9917 c         8864 g         7897 t
ORIGIN      
        1 ccatcggcgc cattttttat gcttccgcca gcggcggcaa aatcaattca tcgctctcat
       61 gctgctgggt gtagcgcatc acttccagta cgcgcaaccc cgcacggtgc accgcatcgg
      121 ttaacgcctt ccctttcagc aagccactga taagctgagc acaaaacagg tcgccagtcc
      181 ctttcaggtc ggtttttacc cgtgaatggg aaatgacatt cacgctgtcg gcactgacca
      241 ccacctgcat ctcctgattt tcttcattac cggaggcgct ggtaatcacc acccatttta
      301 atgtgtctga aagcagactt tttgcggcag caatggcact gtcgagatcg cggcaatttt
      361 taccggtcag gatttccagc tcaaagatat tgggggtaat tccctgcgcc agcggcagta
      421 aatattgtcg atacgcttcg ggaaggtcag gtttgacata aattccgcta tcaatatcgc
      481 caattaccgg atcgaccatg atcaataggt caggatggtc tttgcgtagc gcagtcagcc
      541 actcggcaag gattttgatt tgcgatgccg ttcccatata gcccgtggtt acagcacgaa
      601 gttggcgcag cgcatcacgc tcctgaagcg cacgcaaata gccgctaaac cattcatccg
      661 gaatcgcacc accgtagaaa gtgtcataat gcggcgtatt gctcagcaat accgtcggca
      721 cggcaaagac attcaggccg ttctgtttga tagcaggcac ggcaatgctg ttgcctacgc
      781 tgccgtacac tacctgcgac tgcacggcga cgatatccgc ctgcagcgcc ctgctcttat
      841 cgttaaacaa caacaaacta ctcatttaat tttttctcct tgccgatgag cctcatcgta
      901 ttccaaccga aactttacct gattctggca gtcaaatcgg ctattacaaa acaaggataa
      961 ggtaattcaa tgaagaaaat catttgtctg gtcattacac tactaatgac actccccgct
     1021 tacgcgaagt taactgccca tgaagaagcc cgcatcaacg ccatgctgga gggattagca
     1081 cagaaaaagg atttgatatt tgtgcgcaac ggtgatgaac atacctgcga tgaagcggtt
     1141 tcccacctgc gtctgaagct cggcaatacc cgtaaccgca ttgacactgc cgagcagttt
     1201 attgataagg tagcctcgtc gtcatcgatt accgggaagc cgtatatcgt gaagatgccc
     1261 ggtaagagcg atgagaatgc acagcctttt ttacatgcgt taattgcgca gacggataaa
     1321 acggtgcctg cgcaataatc ttaaatcccc gccccctgac taaaatgctc ttccccaaac
     1381 accccggtgg aaaggtagcg atcgccacga tcgcagatga tcgctaccac caccgcacca
     1441 gggttagctt ttgccacccg cagtgctccg gcaaccgcgc cgccggagct gacgccacag
     1501 aatattcctt cccgcactgc cagttcgcgc atggtgtttt ctgcatcgcg ctgatgaata
     1561 tccagcacct catccaccag agaagcgttg aaaatccccg gcagatattc cgcaggccag
     1621 cggcgaatgc cgggaatgct actgccctct tccggctgca ggccgacaat ggtcaccggt
     1681 ttggattgtt cgcgcataaa gcgtgacacg ccggtgatag tgccggttgt tcccatgctg
     1741 gagacaaaat gggtaatgcg cccgccagtc tgctgccaga tttccggccc ggtggtggtg
     1801 taatgggcgt aagggttatc gggattattg aactgatcga gcagctttcc ttcaccacga
     1861 ttcgccatct ccagcgccag atcgcgcgca ccttccatgc cctgctcttt ggtgacaaga
     1921 atcagttccg caccataagc acgcatcgcc gcacggcgtt cctggctcat gttgtcgggc
     1981 atcagcaatt tcatgcgata gcctttaagc gcggcaatca ttgccagcgc aatgccggtg
     2041 ttaccactgg tggcttcgat taacacatca cccggtttaa tttccccgcg cttttccgcc
     2101 tcgacgatca tcgaaagtgc cgcacgatct ttcaccgaac ctgccgggtt attgccttcc
     2161 agtttcaacc agacttcact gccgttattc ggccccattc gctgcaactt taccagaggc
     2221 gtattgccta ttgtttgttc taatgtactc acgatctcta tccatacgtg gtgttgcctg
     2281 atgcgacgct tgcgcgtctt atcaggtcta caggttacaa accttgccat taaaaagccc
     2341 ggatcgcggg aagcgcctcc gggcgtttaa cattcactca acctatcagg cgctttgtgc
     2401 gagagcaagt tcctcatctc gggtttcgat acgctcgtcg ccgttataca gccgcgcatg
     2461 ttgcagacca acgaataaac gctcgccacg ctgcggggca tcgtcgccat gcatcacgac
     2521 cgtcagcggt tcgttgtacc accccagcgg ctgcaccact aattgggtgt agtgaccttt
     2581 cgggctggct tccagtacct gtaccggcag cggcgaatcg agactggtac ggcggctgat
     2641 atccacttcc cacgggcgca ggaagagatc caccggcccc tgataagcag gtgtgtagcc
     2701 cagcggccag cgatgtgcgc caacatggaa ctgcccgccg cgaatggttc cctgcaggcg
     2761 gttcacttcg cccataaatt cgagcacaaa acgggtcgct ggttcgcgcc atacctgctc
     2821 cggcgcatca gcctgttcaa tattgccctg gctcatcacc actacacgat cagctacttc
     2881 cgtcgcttct tcctggtcgt gggtcacgaa cacgctggtg aatttcagct cttcatgcag
     2941 ttgacgcagc cagcgacgca gctctttacg cacctgcgca tccagcgcgc caaacggttc
     3001 atcaagcagc agaatttgcg gttccacagc cagcgcgcgc gccagcgcca cacgctgttt
     3061 ctggccgccg gaaagctgcg ccggataacg atccgccaga tgcgcaagct ggaccatttc
     3121 cagcaatttt gtcactttcg ctttgatggc tgcggcattc gggcgctcgc gacgcggcag
     3181 caccgtcagg ccaaaagcga tattgtcgaa caccgtcata tggcggaaca gcgcgtaatg
     3241 ctggaacacg aaaccgactt tacggtccca cgcgtgcaga cggctgacat cagtgccatg
     3301 gaagcgaata tgcccgctgg tttgatgctc cagcccggca ataatgcgca gcagcgtggt
     3361 tttcccggaa ccagacggcc ccagcaacgc gaccatctga cctgaaggaa tatccagtga
     3421 gatatcgttc agcacctggg tgcgaccaaa agacttctta atattggcaa tctcaatgct
     3481 catgatgttc ctcctgctgc gcgcgttttt cctgattttc cagacgccac tgcaacatac
     3541 tctttaaaaa cagggtaata atcgccatca gcgtcaacaa cgcggcggcg gtaaaggagc
     3601 cgacggtgtt gtagtcctgc tccagcaatt caatttgtaa cggcagcgaa agtgtttcgc
     3661 cgcgaatcga gccggaaatc accgacactg cgccaaactc gccaatcgcg cgggcgttgg
     3721 tcagcaccac gccgtaaagc agcgcccagc gaatattcgg caatgtgacg cgacggaaca
     3781 tctgccagcc ggacgcgcca agcaaaatcg ccgcttcgtc ttcctggctg ccctggctta
     3841 acatcaccgg caccagctcg cgcaccacaa acggacacgt cacaaagatg gtgaccagca
     3901 ccattccggg ccaggagaac ataatttgca gattatgttc atccagccag ccgccgagcg
     3961 ggccgttgga gccgtagaac agcagataca ccagaccggc aaccaccggc gatacggcaa
     4021 acggaatgtc cagtagcgtc agcagtaact ggcgtccagg gaagttaaag cgcgtcacca
     4081 gccaggccag cagaatgccg aacaccaggt ttaccggtac ggcaatcagc gcgatcatca
     4141 ccgtcagcca gatggcgtgc agcatgtccg gatcggccag attctgtaaa accggcatca
     4201 gccccttgct gaatgcctgc acgaagatgt aaatcatcgg caccagcagg atgaacgccg
     4261 aaaccagcat cccgatgcca atcagaaacc atttgcccca gttaatcggg cgcgcgtcat
     4321 aacgcttcaa ttgggtaact tccgccatta atgacctacc acacgccgac caaagcgact
     4381 ttgcagagtg ttaattgaga acagcagcag cagagatgcc gcgaggatca ccgaagcaat
     4441 cgcgctcgcc gccgggtaat caaactcctg caagcgcaca aaaatcatca gcgacgtcac
     4501 ttccgtcttc caggcgatgt tcccggcgat aaatatcacc gcgccaaact caccaagact
     4561 acgggtaaac gacaacgcca cgcccgccac cagcgccgga gaaagttccg gcagcaccac
     4621 tttgcagaaa ctctgccagc gcgttgcgcc aagcgtttct gccgcttctt catattccgg
     4681 gcctaactct tccagcaccg gctgcacggt acgtaccaca aacggaatgc tggtaaaggc
     4741 catcgccacc gcaatcccca gccaggtata ggtgactttg atatcaaact tcgccagcca
     4801 ttcaccgtaa aaaccgttta cagaaaagag cgaggctagc gttaaaccgg cgactgccgt
     4861 tggcagcgca aagggtaaat ccatcagcgc atcaagcagc gtgcggcccg gaaagcgata
     4921 gcgggttaag atccacgcca tcagcaggcc aaaaacgccg ttaaaaatcg atgccacaaa
     4981 cgctgacagc agcgttactt tgtaggccgc tactacctgc gggttggtga tcacctccca
     5041 gtactgcgcc cagctcatct gagccagctg catcaccagc gcggagagcg gcagcagcaa
     5101 aatcaggcac acaaacagca gactggtgcc gaggcttaag gtaaagcccg gcagcacgcg
     5161 tcttgatgaa actgcaaaca ttaattacgc cccgccgcta acagcttgtc taactcgccg
     5221 ccgctggtga agtgggtttt catcacttcc ggccaggagc caaatttgtc ttccacgcgg
     5281 aacagctcgg tctgcgggaa tttgtttttc agtttgtcca tgacttccgt gttatttacg
     5341 cggtagtaat agtcggtgat gatggtctgc gcctgcaggc tgtagagcca gttaaggtag
     5401 gctttggcgg ctttttccgt accgttggcc tgcacgtttt tatcaaccca cgccaccggg
     5461 aattccgcca gaatgttggt tttcggaatc accacttcaa aaccctgcgc ttcatactgt
     5521 ttacggatgt tgttcacttc cgactcgaag ctgatcagca catcgcccag gccgcgctcg
     5581 gcaaaagtgg tggtcgcgcc acgaccgccg gtatcgaaca cttcaacgtt tttcaggaac
     5641 tgggtcataa actgttcggt tttggcttta tcgccaccgt cagctttatc cgctgcgccc
     5701 cacgcggcta aataggtgta acgcgcgtta cccgacgttt tcgggttcgg gaaaatcagc
     5761 ttcacgtcgg agcgcacgag gtcgttccag tcgtggatat tcttcgggtt acccttacgc
     5821 accaggaagc ccatggtgga gtagaacggc gagctattat tcggcaggcg cgaatgccag
     5881 tcagccggga tcagcttgcc tttgtcgtgc aggatttgta cgtcggtcac ctggttataa
     5941 gtgacaacgt ctgcttttaa gccctgcaaa atcgccagcg cctgttttga tgacccggca
     6001 tgagattgtt ttatcgtcag tttgtcgccg ccgttatctt ttgcccattg ctgttcaaac
     6061 ggcgggttca gggcggcaaa cagctcgcgg gagacgtcat aagaactgtt cagcagttcc
     6121 gttgcctgta catggcccgc cagcagcaga gaagcgacta gcgcgagtga gttctttttc
     6181 agtaagttaa cggccattgc gcacccttat aaatttaatg actttctaat agccatcata
     6241 tttataacgg acgtgaaagg agtaacggtt ttatataccg tttggtgatt tggaagttga
     6301 aaagggaata agaaccgggt ttaaaacgaa atcctcccca cacatgcagg gaagaaacag
     6361 aggtgaatca gataccgacg ctaaccgtct ccggcagtgt gctgccgcca tcaatcacat
     6421 tctgtgtacc ggttaaatag ctggattcat ccgatgcgag gaaggccgcc agttcgccga
     6481 cttccagcgg atcggcgagg cgacgcagcg ggattgcttt tgccatatca gtcagcaccg
     6541 actctggatc ttccgggttc gactggcggg caatgctttc cgccattggc gtgcggacgt
     6601 atcccgggca gatggcgtta acgcgaatac cggattgcgc gtactccacc gccagcgatt
     6661 ttgtcaggcc aacaatcgcc gctttcgtta aggcgtacgc cgtttcaccc ggatcggcca
     6721 ccatatcacc agtgactgaa gacatcatca caatgcgacc atctttgcgg gcaatcatct
     6781 ccggcagcac cgccttcgtg acgttccata cgcctttaat attgatgtca atatggaaat
     6841 cgcgatcgtc atcgctcata tcaaggaaac tgcccagacg acaaacgcct gcgttattca
     6901 ccaggatatc aatgcgccct tctttttcct tcgcgcgttt gatagctgcg gctaccgacg
     6961 ccgggtcacg cacatcggcg acaaccgccg tacagcgatg accacgacca cacagttcgt
     7021 ccgccagctt ttcgatctca ggggagatat ccagcaagat taggtttgcg ccatgacgtg
     7081 caaaagttct ggcaattcct tcgccaattc cctgcaatgc gcccgtaatc agtgctgtca
     7141 tgcccgtgag tttacccatt ttaatgctct ccttgttaat acagagcgtt acactccatt
     7201 ccctctgaaa atacaggata aacaaaatat tgctgcggat cagctcacta attcaggaaa
     7261 atctcaatcc agtcgctgct ttatgcatca tttcaggcgt tgtgttagct cactgctgcg
     7321 ctgaatcatt ttcaatgact ccacatcatt gagttgcaca agaccaacaa acagtaaatc
     7381 ggtaacagaa ttttgcgccg tgcgggtaga catcgacgag ctacgccatt cggtttcacc
     7441 ggaaacggta tcgagcgtga aatgcgccag ccgccgcagc ggagagtcag ccagagaagt
     7501 aatggcaatc accgttgccc cctgctttcg tgccgcttct gcgcacaaga caatctcttt
     7561 tttactgccg ctgtaagaga tagcgatttg tacatcgcct tttttcaacg cctgggaaac
     7621 ggtggcttgt acgtgcgtgt cggcttcgca ggccacgcga tagccaattt tcatcagttt
     7681 gaacgacaga tcgcgcccca ccagcgccga cccgcccagg ccagttatct ggataaacgg
     7741 tgctttactg atgacctcaa tgattttttg cagccgcgca aagtcaaaca acgcgcaggt
     7801 ctgttccagc gccagctctt tttcgcgatt cagtttgcgg gcaatcactt ccagcgaatc
     7861 atcactggta atcgaacttt gcaggtgcag cgccgtggca ttcgttttct cccggctggc
     7921 actgtattcg cctattaacg ccatacgcaa ttcagtaaat ccttgtgcgc cgagcttctg
     7981 ggcaaacttc acaatactcg actggctgat gccgagctgt ttcgccatct tgcgcgaaga
     8041 gacggatttc agctcactca cgttggcccg cagaaagtca gcaatttttt gctcgttccc
     8101 ggtaaattca ctttccgcat tgcgtatttt cgtcaggtac aacatcttcc actctcctgg
     8161 gctggcagca aaaattccgc ttaagttctt atgacgctct tcacactctg cgagtgtaga
     8221 ctcaatgatt cctttaagtc tgtcaattcg ggatatatga ttccatacat ctgcaattat
     8281 ttgatcgtaa atagtaaggt caccaccgat gcaactagaa aagatgatta ctgaaggctc
     8341 gaacaccgcc tcggctgaaa ttgaccgcgt atcgacgctg gaaatgtgcc ggattatcaa
     8401 cgatgaagat aaaaccgtac cgcttgccgt tgagcgcgtc ctgccggata tcgccgcggc
     8461 gatcgatgtt atccacgccc aggtcagcgg cggcggtcgt ctgatttatc tcggtgcggg
     8521 aacatccggt cgtctgggga ttctggatgc cagcgaatgt ccgcccacct acggcgtgaa
     8581 accgggtctg gtggttggtt tgattgctgg aggcgaatat gccattcagc acgcggtgga
     8641 aggcgctgaa gattgccggg aaggtggtgt taacgatctg aaaaatatta atttaacggc
     8701 acaggatgtg gtggttggca ttgctgccag cggtcgcacg ccgtatgtga ttgccggact
     8761 ggaatacgca cgccagctcg gctgccgcac agtgggaatt tcctgtaatc cggggagcgc
     8821 cgtttcaacc accgcagagt ttgccattac accgattgta ggtgccgaag tggttaccgg
     8881 ttcttcgcgg atgaaagcgg gtacggcgca gaaactggtg ctcaatatgc tctccaccgg
     8941 gctgatgatt aaatccggca aagtgttcgg caacctgatg gtcgatgtgg tcgccaccaa
     9001 cgaaaaactg catgtgcgcc aggtcaatat cgttaaaaac gccaccggat gtaatgccga
     9061 acaagcggaa gcggcgttaa ttgcctgcga gcgcaactgt aaaacggcca ttgtgatggt
     9121 gctaaaaaat ctcgatgccg cagaagctaa aaaacgcctg gatcaacacg gcggctttat
     9181 tcgtcaggtt ttagacaagg aataacccat ggccaaagag atcagcagtg aacttctgaa
     9241 caccattctt acccgtgtcg gcggaccggg aaatatcgcc agttgtggta actgtatgac
     9301 gcgcctgcgt ctgggtgtac atgacagttc actggttgat cccaatatca acacgctgga
     9361 aggcgtgaag ggcgtcattt agaccagcga ccaggtccag gtcgtttttg ggcctggtaa
     9421 agcgcatcgt gccgcaaaag cgatgagcga gctgctggga gaagcaccgg tacaggatgc
     9481 ctcagaaatc gccgcgcaga acaaacgtca gttaaaagcc aaacaaacct ccggcgtgca
     9541 acaatttctc gccaaattcg ccaccatctt cacgccgctg atccccggtt ttattgccgc
     9601 cggtctgctg ctggggatag cgacgttaat tgccacggtg atgcacgttc cggcagatgc
     9661 tcagggcacg ctacccgacg cgctgaattt tatgaaggtg ttcagtaaag gtttgttcac
     9721 tttcctggtg attctggtgg gctataacgc cgcccaggca tttggcggca cgggcgtcaa
     9781 tggcgcaatt attgccgcac tctttttgct cggttataac cccgctgcaa ccaccggtta
     9841 ctacgccagt tttcacgatt tctttggtct gcccatcgat ccgcgcggca atattatcgg
     9901 cgtgctgatt gccgcgtggg cctgcgcccg cattgaaggc atggtgcgcc gctttatgcc
     9961 ggacgatctc gacatgctgc tgacctcgtt aatcaccctg ctgatcaccg ctacgcttgc
    10021 gtacctaatc attatgccgc tgggtggcta gttattcgaa ggtatgtcat ggctgtttat
    10081 gcacctgaac agtaatccgt tcggttgtgc ggttttagcc gggctgttcc tgatcgccgt
    10141 ggtatttggc gtgcatcagg gctttattcc tgtttacctc gcgttaatgg acagccaggg
    10201 attcaacagc ttatttccca tcctttcaat ggcaggcgcg ggccaggtgg gcgcggcgct
    10261 ggcactctac tggcgggcgc aaccgcacag tgcgctacgc agtcaggtac gcggggcgat
    10321 tattcccggc ctgctgggcg ttggtgaacc gctgatttac ggtgtcaccc tgccccgcat
    10381 gaagccgttt gttaccgcct gtttaggcgg cgcggcgggc ggtttgttta tcggcctgat
    10441 agcctggtgg ggtctgccga tgggcttaaa cagcgccttt gggccgtctg gtatggtagc
    10501 gctgccgctg atgacttccg cacaaggcat ccttccggca atggcggttt atgctggcgg
    10561 gattctggtg gcatgggttt gcgggtttat tttcaccacg ctctttggct gccgtaacgt
    10621 caatctggac tgatatcatg aaacggacaa tgctctatct ttctctgctg gctgttagtt
    10681 gtagcgtcag cgccgcaaaa taccctgttc tgacagaaag ttcgccagag aaagcagggt
    10741 tcaacgtcga acggcttaac cagatggatc gctggattag ccagcaagtg gacgccggtt
    10801 atcccggcgt aaacctgctg attataaaag ataatcagat tgtgtatcgc aaagcctggg
    10861 gagcggcgaa aaagtacgat ggcagcgtat tgatggaaca gcctgtcaaa gccaccaccg
    10921 ggacgctgta tgacctggct tccaatacca agatgtacgc cactaacttt gctctgcaaa
    10981 agctaatgag cgaaggcaag ctgcatcctg acgatcggat tgcgaaatat attccggggt
    11041 ttgccgatag tccaaatgac accattaaag gcaaaaacac cctgcggatt tctgacctgc
    11101 tgcatcacag cggcggtttc ccggcagatc cgcaataccc gaataaagcg gtcgcgggcg
    11161 cgttatattc ccaggataaa ggccagacgc tggagatgat caagcacacg ccgctggaat
    11221 atcagcctgg cagcaagcat atctacagcg atgtcgatta tatgctgctt ggatttatcg
    11281 tcgagtcggt taccggtcag ccgcttgacc gctatgttga agagtcgatt tatcgcccgc
    11341 tcggtctgac gcatacggtg tttaatccgc ttctgaaagg ctttaaaccg caacaaattg
    11401 ccgccacgga attgaacggc aatacccgcg atggcgtgat ccacttcccg aatatccgca
    11461 cttccactct ctggggtcaa gtgcacgatg aaaaagcatt ctattcgatg ggtggcgttt
    11521 ccgggcacgc aggtttgttt tccaataccg gcgatattgc ggtgttaatg caaacgatgc
    11581 tgaacggcgg cggctatggc gatgtgcagc tgttcagtgc ggaaacggtg aagatgttca
    11641 ccaccagctc aaaggaagac gccacttttg gccttggctg gcgagtcaat ggtaatgcca
    11701 ccatgacgcc gacgtttggc acgctggcaa gcccgcaaac ctacggtcac actggctgga
    11761 ccgggacagt aatcgttatc gatccggtca atcatatggc gattgtgatg ttaagcaaca
    11821 agccccattc gccagttgcc gatccacaaa aaaatcccaa tatgttcgaa agcggtcagt
    11881 taccgattgc aacttatggt tgggtagttg atcaggtgta tgcggcgttg aagcaaaagt
    11941 aataaaaagg ccagtcagtt ttgttactgg ctggccttta atcatcgaat cagaaacgct
    12001 tacagcgcca tcagcttgtc cagcgacggc gcgaagtaat agccgccggt taccggtttg
    12061 gtgaaacgca acatcgcatc acgcttacca tcggtatcgc caaacatgct cagcagttgc
    12121 tgctcaatgt tatgcagacg cgcgcagtag gcgcagaagt acagaccgtg agtgccactg
    12181 gcggtgccgt acggcaggct ctggcgaaca atcttcagcc ctttgccatc ttctttcaga
    12241 tcaacgcggg tgaggtgaga ggtttccgga cgttcgtcgc cgtcaatctc ttcgttggtc
    12301 tctttggtgc gcccgatcat tatctcctga tcgtgaacgc tcatccggtt gagctgcttc
    12361 aggttgtgct cccaacgctg cacaaacaca tagctgccgc cggcatccat gccgtctttg
    12421 ataaccgcca cttcgcgacg cgtctcttca cccgccgggt tctctgtacc gtcaacaaag
    12481 ccgctcaggt cacgctcttc aacccaacgg aagccgtgga tctcttcttt cacttcaatg
    12541 cagtcaccaa aggcttccat cgccgcctgg gcgacagaga agtttacgtc gtgacgcaga
    12601 gaaagaatgt ggatcaacac atcgaactgg gtggtcggcg caaggccttt accgtagccc
    12661 ggaaaatctt tcagctcttc tgccccaacg ccgccgctca gagcgcgcca ggtgttgtta
    12721 ccaaaggcaa ccaccgcacc aagatgcgcg tccgggaatt tcgcttcaaa agttgccagt
    12781 ttgtcggcaa atgttttact ggccgcacgc agggcgtcaa cttccccttt cacgttggct
    12841 tcgatccaaa tcgccgcgcg gcaatgttct ggcaaaatgc cactctgaac ctgagacatt
    12901 gttcctcctg aaaataagaa tgccacgcaa tccgtggcat tgttgagctc tattttacgt
    12961 gttttttcgc ggcggcggtt tgttcagacg caaattaacg ccgccagata attttactga
    13021 ctttccagtt tttcagggta tcgtccgaag gcattaaccc ttcaggacca cgccattccc
    13081 cgctgaactg gtagctaata tgttgactgc cttcggcttt acattcgacg gcacgattat
    13141 catcaccatc agctttttgg caattgccaa atgctttgct gtaaaggtcg ctaaacggtg
    13201 taccgatttt aacaccggtg tcagcaggaa tatcgctatc cagcacgtca atgcgactga
    13261 tcgtgccttg atcgccgtta atcaccatcg ccacgttgtc gcccttcatc acttcaaaaa
    13321 agcgcaccac gttgccgttc gcggttttca ttccgctgcg caggcgataa tcgccatcaa
    13381 gcgcatcggc aatggcttgt tcttgcagtg gtgtggacgc cgttaattca cccacgccct
    13441 gctcgctcac tttggtggac gatccaaacc agttccacgg gttagcggca gaccagttaa
    13501 ctgacgacat cgtggaacag ccggtcagca tcaacggcat agcgcataac attaaacgca
    13561 gcgatttcat gtcacttcct ttggttattc aataacgttg cttggagtgc aaattcacca
    13621 aaaagtgccg ttattctttt tcttcattaa aacaagcgcg taaacgtcga ttggtcagca
    13681 gccagattaa cgccacaata tccgccacta ccagcgccag accgataccg ctaacggatt
    13741 caccgttcag ccacagccac ggttgccagc aaagtaaaac cacctgcgcc aacagcaaca
    13801 gaaaatagag tacacgccag gtgcgaggaa acgtagcccg ccgaccgctc aacaaaaacg
    13861 ccagcaccgc gggaatgccg ggaatcagcc ccagccagaa attatcgtga tcgggataaa
    13921 acagatttag cagcgcagta ccctgctcgc gcgacgcacc ggcaatgaca aacagccccc
    13981 aggttcgcgc ctgaagcaat agcacaagcc agaagagcaa gggtaaacgc aggcgaccgt
    14041 gcgcatcata atggacagga tggaactcag tactcttcat cttcaatcaa acgcttaccc
    14101 agactcagca cgtcggcgtg ttcatatccc aggcgttcat acattccgag caccatgtcg
    14161 ttatcttccg gcacattgat ctgaattttc gggcagccac gagcaatcag ctttttctcc
    14221 agccgattaa gcaacgcatt ggcaatccca cgcccacgaa actctggatg cacgccaaga
    14281 taataagcag acccgcgatg cccgtcataa ccacccatca ccgttccgac cacttcaccg
    14341 ttcacctcag cgaccagaaa caaactgacg tcatggttca tcttacgctc gatgtccatt
    14401 tccggatcgt tccacggacg cagcaagtcg caacgctccc aaagggtgat gacctcttcg
    14461 aaatcttcct ggcgaaatac gcgtatctcc atggtattcg ttaccttttt gcgggttaaa
    14521 aggctgatta tggcgtgaac ggtcgaatta gccaatatct gacgaaaatc ggttgaaaaa
    14581 gtggcataat ggggagttgt caactattga aatgaaaagt aaaacaattc tcaacagcaa
    14641 accgtcgtaa cggattacgc gatacgatat aacatctgga actttattat tacaactcag
    14701 gccgtatgag cacttttaaa ccactaaaaa cactcacttc gcgccgccag gtgctgaaag
    14761 ccggtttggc tgccctgacg ttgtcaggaa tgtcgcaagc catcgccaaa gacgaacctt
    14821 taaaaaccag caacggacac agcaagccga aagccaaaaa atctggcggc aaacgtgtcg
    14881 ttgttctcga tccaggccac ggtgggatcg ataccggagc gatcggacgc aacggttcga
    14941 aagaaaaaca tgtggtgctg gcgattgcta aaaacgtccg ttccattttg cgtaatcatg
    15001 ggattgatgc gcgtttaacg cgttctggcg atacgtttat cccactttac gatcgcgttg
    15061 aaatcgccca taaacatggc gcagatctgt ttatgtcaat tcatgccgat ggctttacca
    15121 acccgaaagc tgccggtgct tcggtatttg ccctctctaa ccgtggggca agtagcgcaa
    15181 tggcgaaata cctgtctgaa cgcgaaaacc gcgccgatga agttgccggt aaaaaggcga
    15241 ctgacaagga tcacctattg cagcaagtgc tgtttgatct ggtgcaaacc gatactatta
    15301 aaaacagcct gacgcttggc tcgcatattc tgaaaaagat taagccggtg cataaactgc
    15361 acagccgcaa caccgaacaa gccgcgtttg tggtgttgaa atcgccgtcg gttccttcgg
    15421 tgctggtgga aacctcgttt atcaccaacc cggaagaaga gcggctgtta ggcacggcgg
    15481 cgtttcgtca gaaaatcgcc acagcgattg ctgaaggcgt gatcagttat ttccactggt
    15541 tcgacaacca gaaagcacat tcgaaaaagc gataagttat gaaacccgac gcacaccagg
    15601 ttaaacagtt tctgctcaac cttcaggata cgatttgtca gcagctgacc gccgtcgatg
    15661 gcgcagaatt tgtcgaagat agttggcagc gcgaagctgg cggcggcggg cgcagtcggg
    15721 tgttgcgtaa tggtggtgtt ttcgaacagg cgggcgtcaa cttttctcac gtccacggtg
    15781 aggcgatgcc tgcttccgcc accgctcatc gcccggaact tgccgggcgc agtttcgagg
    15841 cgatgggcgt ttcactggta gtgcatccgc ataacccgta tgttcccacc agccacgcga
    15901 atgtgcgttt ttttattgcc gaaaaaccgg gtgcagagcc cgtctggtgg tttggcggcg
    15961 gcttcgattt aacccctttc tatggttttg aagaagacgc cattcactgg caccgcaccg
    16021 cccgtgacct gtgcctgcca tttggcgaag acgtttatcc ccgttacaaa aagtggtgcg
    16081 acgattactt ctacctcaaa catcgcaacg aacagcgcgg cattggcggg ctgttctttg
    16141 atgatctgaa cacgccagat ttcgaccact gttttgcctt tatgcaggcg gtaggcaaag
    16201 gctacaccga cgcttattta ccaattgtag agcgacgtaa agcgatggcc tacggcgagc
    16261 gcgagcgcaa ttttcagctc taccgtcgcg gtcgttatgt cgagttcaat ctggtctggg
    16321 atcgcggcac gctgtttggc ctgcaaactg gcgggcgcac cgagtcgatc ctgatgtcaa
    16381 tgccgccact ggtacgctgg gagtatgatt atcagccaaa agatggcagc ccagaagcgg
    16441 cgttaagtga gtttattaag gtcagggatt gggtgtaact ccctcccccc cattcccgca
    16501 tccgctgatg caacgtcaac gacggcttct cggcaaacag ctgctggtaa tccgtggcaa
    16561 attgccccag atgccagaat ccccactgca tggcggcgtc ttttaccgtt gtgctttgcg
    16621 accacgggct tatcagttcg cggcgtacgg tgttcaggcg aatgcgtttc agccacgcgt
    16681 ttgggccaat gcctaaaata gcgtgaaacg cgttttgtag cgtgcggcga ctgacatgca
    16741 gttgattaca caagtccaac accgtcaccg gttcggacat gttttccagc acatattcac
    16801 gggcgcgaga aagcaaccga cggtaactct gatgactgat gctttccgcc gtcaccattg
    16861 gttgcgcttc ttccagcatc gcccccatcg ccattagcaa attatccccc agcacttttc
    16921 gcactgcagg ctgatggaga ttttccgggt tctcgcaaaa cgtcgccagc gcctgttgga
    16981 caaagcccca cagcgcggct ttatgctgct ctttcacttc cagcgccgac tggctacgca
    17041 gcatatgtaa tacccgatcc ggattgtgca aaaagttagc ctgacgggtg atgacatctt
    17101 cagacagcac tacgcccagg atcgtataat cgtccggcgt acttaattca aactcggttc
    17161 caccggggcg cgtcgctatt tctgcgcttc ccagacattg cgaaccgata aatccctgct
    17221 caccgcgcgt cgccggaatg ccaaaccaga acgagttcgg ccagaccagg cacgactgac
    17281 gcagcgccag accggtgtat tcacgaaaaa cctgaatatc atcgagtaga atttccgtaa
    17341 attcaccatg aaacttgccc ggatgcagct gatcgtaaat ctgctgccag gcggtaatcg
    17401 tcaaagcatg ttcatagaca tccgttgtct gtcgttgatg aacattatcc acttcgacct
    17461 tcggcgtgag cttcaggttt tcgggtaagg gttcatgata aagatggtgc aaattggctg
    17521 tacgggtctt tttcatgatg ttaatgccgg gtgttgtagg acacccggca cctccgacag
    17581 gttaatgggg cttgagacga taacgactac tgcgtttacg taacgtcccg gcagaaaaga
    17641 gctgttcgag cgcatttctg gctttttcca gcggccagcc aaagtgggca gccacttctc
    17701 ctgccgtcat tccctgacgt actgatgtta acagcgccaa caactcgtca gcagattccg
    17761 cgacgataac tggcgcgtcg ggttccttta cgggttgctt cggctggcgg ttaaagccag
    17821 taaccagcca ctgggtgtca tcgtctggcc gaccgatctc cttgcggctg atgacacgcc
    17881 cggtacgcat cgcggcagca caacctgcgt ccagcgccgc acgacacgcc gccagatcgc
    17941 cttccaccac cagcgttaag cgaccagggt caagcacttc gtgactgagc agacgaacgt
    18001 tagctgcttt gagcatggca tccgctgcat ctatcgcggc gaccatgccg tccacttcca
    18061 gcaatcccag tgcattgatc atcggcaacc tccgttacgc acgctggatt ggattacgcg
    18121 cgatttccag cactgcatcg gtaaaggcgt tacaggccgc tttacacgct gcctggctac
    18181 cggttaaaaa tgctgccgag tagttggttt cagacggtgg cgggacgtag gtcaccagct
    18241 gtacgtcggc agatttcaac gcggcatcaa tgccgtaggt cgcttccagc ggcggtgcca
    18301 ccagatacgc catcggatcg ccaagcgtga tcccggcggt tgatgaaaga taagaaccgg
    18361 tacgcgaaac cacatgcgcc aggaaggcgg tgttttctgc gtcattggcc cactggaaag
    18421 ctgcgccatt ttcaatatgt gcaaccatcg catccagacc ggcacgcact tccgccgggt
    18481 ttggcccacc aagcataatc agcacttcac cggcagtcgg tgacgggccg tgtgccgctc
    18541 ccgcatacag cgagcgacca tataccactt cgaccatcgc ttgtttggtc gcttcgtcag
    18601 ccgcaatgta ggttacgtcg tcagaatcgg cagaaatcag cccgaggcta cgaatatgcg
    18661 gcggcaattt tagttcacgc gcaaattcag cgttaacgga ggcaatcacc cgcatggcgg
    18721 ttaccgacgg tcgaatcaaa tctaaagctg gcatgatgcc tccttatcgg gtcatgttga
    18781 tgccggatgc tttctgctcc agcatacgtt tcgccaaatc cacaatgacg gctgcggctt
    18841 caaccggagg cgtgccgccc tggtgaatgt tagagataca ggtacggtcg gcctcaacgg
    18901 tggttgccat acgcggcgag taaacggcgt agcaggagag gctttctgac tgccctaatc
    18961 ccgggcgttc ccccaccagt aggatcacta ctttcgcacc gaggatctca ccgatctgat
    19021 cttcaatctt cacgcgacca taacgaacaa agaatggcgt gccgactttc agcccggcct
    19081 gtttcaggcc cgccatcagc ggcggcagga tctcttcgta gttcacggtg atggcatcag
    19141 ttgacaggcc atcagaaata acgacctgta cgtcattagc aacacactgt gctttcagcg
    19201 cttcaacagc ttctgcacac aggcggcggc ccatatccgg acgagtcagg tagagatttt
    19261 tgtcgctaat ttcagagcgg acttccagca agccctgcgc tttcacccac tcttccggca
    19321 cttctttcag tacggtatct ttcgaacgag agtgatcggc caagaaacgc agcagcgcct
    19381 gcgtacgtgg acgcggaccg gcacgaccgg tacaaacgcg ggccacggtg ctgcggcgca
    19441 gttctgttaa tacgtctgcg cgatgcgggt tttcaacacc aatccacgct tttgcttccg
    19501 cagaacctaa atccagcgcg cagctttccg aggtcaccgg tgccgcacag ttggtggtgg
    19561 cgcactttgc ttctgacggc gcgggggccg cttgtcccat tgacgccatc acgctgcgta
    19621 caatttcttc aatctgtttt tgatccatga tgtgttatct ccgcgtcatc agaagaacag
    19681 tgacggatcg cccgcccgtt tggtcaggcg accgtttgcc ataatgccca tgctttccag
    19741 ccagcgttca aactccggtg acgggcgcag gttgagtaac tgacgcacag tggcagtgtc
    19801 gtggaaggcc gtggtctggt agttgagcat gatgtcatcg cccaacggca tccccatgat
    19861 gtagttgcag cctgcggtgg cgagcaggat catcaggttt tcgttgaggt tctggtcagc
    19921 gtcagcgtgg ttggtgtaac agcagtcaca gcccatagag atgccgctca gcttgcccat
    19981 aaagtgatct tctaagccag cacggataat ctggcggtcg ttgtagagat actccggccc
    20041 aataaaaccg accacggtgt tgacgataaa cggatcgtaa tgacgcgcca gcccatagtt
    20101 acgtgcttcc atcgtcacct ggtcagcgcc gaagttagcg ccagcggata gcgcagagcc
    20161 ttgtccggtt tcgaagtaga ggcagttttc cccggcgata cggttgaact ctgcacccac
    20221 tgcgcgcgct tcgtcgagca tcgccagttc cacgccaaac tctttcagcc ctttttcact
    20281 gccacagata ctctggaaaa tcagcccgcc tggtgcgcca cgacgaatcg cttcgatctg
    20341 ggtggtgacg tgcgccagta cgcagccctg agttgggatg ttgaatttgt cgatcacgcc
    20401 atagatggtg tccagcacgc ggcttaagtt ttccacgtcg tcagttaccg ggttgacgcc
    20461 gatcaccgca tcgcccaccc cgaaggaaag cccttcgtag atttgcgcgg cgataccttg
    20521 cacgtcgtca cgggtgtcat ttggctgcaa acgggcgctg aaggtgcccg gaataccgat
    20581 ggtggtattg gcctttttga ttaccggcat tttcttcgcg ccgtagatca agtccgcgtt
    20641 ggagcaaatc ttcgctaccg ccgcgaccac ttccgaggtc agccctttgc gggtaaaggc
    20701 aatgtcgtcc acgctggttt catcgctcag cacatactca cgcagttcgc tgatgctcca
    20761 gtttttaatc tggttgtagg ccgtttcgtt aacatcgtcc tgaatcagcc gcgtcacgca
    20821 gtcatcttca taggcaatta ccggattatt gcggatgtcc gctacggtca tttccgacaa
    20881 cacctgcttt gccgccacgc gctcctgtga gcttgccgct gcaacgcccg ccagcacatc
    20941 ccccgaacgc agttcgttgg ctttagccag cacctctttt acatccttaa actgatatac
    21001 attgccgaac aatgtggtct ttagtttcat aagtcgttcc ctcaggaagg aaatgcgagt
    21061 gatttcaccg tcaccggcac aaccgatccg ccaaaaagag gcgtaccaat gtcgatatag
    21121 tcccccgcgc ggacaatcac ttcgtcaatg actgccaacg ggagttgttg tagctgtggg
    21181 cgcaacaaca tgcccagagt tttaccaaag tcctgcccgg ccaccaccag caggggatgc
    21241 ggattcggaa aacgcgcgac gaaatcgacc agcgcgttga tgaccgtcag taccgcggcg
    21301 taacgcacag gcagcgaggc gggaagcgcc agcacgtacg cgtcagtttt gggatcaaga
    21361 tccagctgaa gcagcgcctg ttgccaggca ctcaccagat ccgtttcatc aatcgggatc
    21421 gccaccggca aattgcgcag cggcagttgt acgccctcca gccagattgt gctgccagag
    21481 agcgaaaggg tatgcgcgcc cgcaccaatc accgtggcgc gcacggtttg cgccggaaac
    21541 tgtacgttca tctcacgcag gcgcggatgg tcatgcagcg ccgttgccag cagcgggcca
    21601 atatcggcaa aacagaacgg gtcggcgggc tggtggcgat aacattcgcc cacgccgcca
    21661 gaaagcgtaa tgatttcggg cgtaacacct gcgggcagca aaccggtttg cattaatgcc
    21721 tgtgcgagcg gcgagagcgt tccgtcaatc acttcgacaa tcagctctgc catccgccgg
    21781 gtaacctgca ccagctgcgc gccggtcagc gaacgggcgt cggtgcctgc gccgaagcac
    21841 tcatccacaa tcatctgccc cggtttatga gcgtaaacca cgcgcccctg gctgtcggtt
    21901 tccagcaggc gaccaccgac gttgaggcag gcagtgccgc tgatttttcc ggcatcgaac
    21961 agggcgtagt tcgcggtgcc accgccgatg tcgatattca gtacccgaca cagccgttgt
    22021 tcagaaaggg tttgcggccc ggcgctggca acgacaaaat cgcccagcga ctgagagagc
    22081 gccatcaccg ccgggcgagc attgcgggtt ttcgcgcttt caccggtgat gatgatggca
    22141 ccagaatcaa cgctttccgg cgcaatgccc gcagcctgat attgctctaa aatcagcgat
    22201 ttcagttccg cttcttttaa accaccctgt ttatcgacag gggtaaagaa caccgggctt
    22261 tgccagctaa tttcgcgttt gatgaattcg tagcgcggca cctgcgacac cgccgcacgg
    22321 ttaaccagtt ccaggtggga gaaaatcacc tgggtggtgg tggtgccgat atcgataccg
    22381 acgctcagta gctggcgagt gttcacgatt gtgcctccgc ttcggtttta gtcgcggtcg
    22441 cgtcttcttt tggcaccagc atcatcgcca cgccaatcgc cgttacgccg ccgatcaact
    22501 tgccgacaat catcgggaag atcatggcat tcatgttggc agcggcgaag cctaagtggt
    22561 cgcccagggc gaaagcagcg gaaacggcga aggcgcagtt gatgactttg ccgcgggtat
    22621 ccatctgctt catcatgccg aacatcggga tattgttggc aagcgttgcc actatgccgg
    22681 ctgccgcgat gttgttcata ttcagtactt taccgacgct catcagcgtt ttttcaaacc
    22741 agcgagtcag cagcagcacc attggatacg cccctaacag cacgcaggag atagaaccga
    22801 taacttcaat ggcgcgcatc acctcaccgg gtttatcgcc aggggccata aagataggat
    22861 ccagtccggg gatcagttcc cagtcaagga ggaatttcac taccgcagcg gcaagaccga
    22921 gggtgatcaa tgcaacgagg aatttggcga agatctggaa gccgttgatc attttttccg
    22981 ggatgaattt cagccccagc gccaccagta ccgcgacgat aagtaccggg atcatattca
    23041 tcaggataag cgcaaaggtg aattccaccg gctgaccatt gatctgcaca ccggagtaca
    23101 tagcaaccag accaccagca atacagccaa tcggaatggt cacaatgccc gccagcacgc
    23161 cgagcgccag ataacgacgg tcagaaggtt cgataatgcc gagcgccacc ggaatggaaa
    23221 acacaatcgt tggccccatc atcgacccga gaattaaccc agagtatagc cacgctgcta
    23281 cgtcgccgcc cgccagctct ttggcgagga agaagccgcc catatcgcac gccagcagcg
    23341 ttccggcgaa cattgacggg tttgcgccga gcatttcgta aaccgggata attaccggcc
    23401 cgagtacgtg agccagtacc ggtgccagcg cggtcatacc gaccatcgcc agacccagag
    23461 cgcccattgc cataaagcct tcttcgaact gaccgcctga tccttcgata cttttaccga
    23521 acttaccgag gaaacgagca gaaccgccga actgcgacag gatcctgtct acggcagcta
    23581 tcagcataaa gaacatcatg atgtacatga tgatttcgtt aattcccatc gcctttactc
    23641 cctgttagtt attatttatt ggcggatgcg gcgtaaacgc cttatccgcc ctacatgtgc
    23701 aatcccccag gccggataag acgcgacatg cgtcgcatcc ggcatttatt gcgccgcagc
    23761 atacagacca ataatctgtt ccaggctggc ggtacgcggg ttgctgcgca gacaaatatc
    23821 ttccagcgcg gcctgcgccc atgcgccgta atgtccggtt gttgcaccca cgtctgccag
    23881 ccgcttgttg atcccaactt ccgtaatcag ctcgcttacc acgctaatta cctcgcgatc
    23941 gtcagttttc ttgtttgtca gcgcccgacc aatctgacta aaccgttcgc gacaaaccat
    24001 ccggttaaat tccatcaccg ttggcagcaa catggcgttc gccagaccgt gtggaatatg
    24061 cagcgccgcc cctggctgat gcgccatcgc gtggcacaac ccaagccccg cactggaaaa
    24121 cgccattccc gccatacatg aagccagtaa catgctctcg cgcgcggcaa ggtcatgacc
    24181 gtagcccacc gctttcggca gagatttgcc aatcatcgca atggcaccaa tcgccaggct
    24241 gtcggtaaac ggtgtagcgt tcagcgcgct gtacgcttca atagcatggg ttaacgcgtc
    24301 gataccggtc atcgccgtga catgcgacgg cacaccttcg gtcaacgcgg cgtcgagaat
    24361 cgccacatcc ggcatcagcg aagcatgggc taacacctgc ttgcgcccgc tcaccgcgtc
    24421 gataatcacc gttacgttgg tggtttcaga gccggttccg gcggtcgttg gaatggcaat
    24481 caacggcagg cgcggttgca gaacgctggt ttctgacatt tccgccagcg tgctatcggg
    24541 gttcgtcacc agcaacgcca cggcttttgc tgcatccagc accgagccgc cgccaaacgc
    24601 gatcaccccg tcacaacccg attcacgcaa ctgcgccacg gctgcacaca cgtcggtgat
    24661 gcacggttcg cccaccggac atggccagag cgtcatggcg atgcctttaa cagccaggct
    24721 gcgcgtcagc ccggcggtca tccccgcctg atgcaaaaag ctgtctgcca tcacgaacag
    24781 atgtttcagc ccacgcgttt gcgcttgctg cccgcaactg ctcaccgcgc ccggaccgca
    24841 aagcgtcacc ggtggaacgc taaatgtttt tacccgttgc agattcaggg tatcgaacgc
    24901 ctgaaagagc gcggtctgca attcattttg catatagccc ctccgctttc tctcgcccac
    24961 tactggcgat cgccagcggg gtcataaaca aactgtgctg cggtaaatgc acctgtaacg
    25021 ccgggaattg tttgcgaaac agttccgcca cgcccggttg catacaagag ccgcccgcca
    25081 gccataaatc agtaatgccc tgcccttcaa tatgccgggc gacaatgtcc gccatttttt
    25141 cgtacaccgg tttcaccgcg ggccaaatct cgtcaccatg accgcgcttg tactgctctg
    25201 cctcttccag cgaaatacga cgatttccgg cgagagtcag agagatgtga tgtccgccgg
    25261 tggcttcatc cgccgagtac gtcaccttgc cctttttcac gatggcaatg ccggtagtgc
    25321 cgccgccgat atccactaca ccggcgttgt ccagttgcag cagatccgcg actgcggttg
    25381 gctcatccag cacatggctc acttccagcc cggcagattc cagcacgttg atggaaatac
    25441 gcgggtccgt acctggagga aatgaagtcg ccgcatggct aaaacgaaga ccgaattgct
    25501 gctcaagagt gtcgagatgg cgacgaacaa tggtgaccgc accgaagaaa tcccagacga
    25561 tgccgtcgcg gaccacatcg gcccagtcga ggcataccgc caccggctga ccgtcgcggt
    25621 caacaaccat cgacaccaca tcgcaggtgc ccagatccac ccccagccac agcggagatt
    25681 ccgtcgcggc aggcgtctgg ttacacagcg ttgccgccgt ttgcagacgt ggggtgagcc
    25741 attgttcgtc gtgcgccatc ggttactcct taaacaatgc gaaacgcatc gactaataca
    25801 cagcgacgca gacggacaaa cgtacgcgcg ctggttaccc cttcaccggt tggcgtggtg
    25861 atggtcatgg tggtccagcc ttccccgccc agtcccagcc cggcaatgca cggtccgttc
    25921 ttaacgaaaa tgctggtatc aatggcattc gccatctggt tcatgttctc gatattgcgc
    25981 gagtgcattg ccgccgtgtg gtggcaaccg ccctccagtt tcaccgccag cgcaatggca
    26041 tccgccacgt tggcgacgcg cacgacgggc agcaccggca tcatcaattc ggtcacggca
    26101 aacggatgtt ctgcagtggt ttccacaaac agcaaacgcg tttcttgcgg cacgttcagg
    26161 ccgattgccg ccgcgatttt cgccgcatcg cgaccaaccc agtcacggct gacggtgcct
    26221 tttccgcgct cgtcgatatt tttcagcaac accggttgca gctgctgcgc ctgttctgcg
    26281 gtcagtttca ccgcgtgctg gccttccatc agacgcatca gttcattggc tacgctatca
    26341 acaacaatca gtaccttttc gtcggcacaa atgatgttgt tatcgaaaga cgcgcctttg
    26401 acgatggact gagcagcacg ggcgaggtca gcggtttcat ccaccactac cggcgggttg
    26461 ccagcgcctg cggcaatcag acgtttattg gtgtgtttac gcgccgcttc tactaccgct
    26521 ttgccgccgg tcaccaccag caggccgata cccggaaact tgaacaagcg ttgcgcggtt
    26581 tcgatatccg gatttgccac agtaaccagt aagttttccg gcccacctgc ggcaacaatc
    26641 gcctggttga gcagcgtaat cgcccgctgg gagacttttt tcgccgccgg atgcggggca
    26701 aaaatgacgc tgttgcccgc ggcaatcagg ctgatggcgt tgttaattac ggttgccgcc
    26761 gggttagtgg aaggcgtcac cgaagccacc acgccccagg gtgcgttttc aattagggtc
    26821 aggccgttgt cgccagtcag cacttgcgga gagaggcact caacgcctgg tgtgccgcgc
    26881 gcctgagcga cgttttttgc aaatttatct tcaacgcgcc ccatgccggt ttcactgacg
    26941 gcaagttccg ctaaatctct ggcgtgtttt tcgcctgctt cacgaatggc agcaatggct
    27001 aactggcgca ttgccacgct ttttaaccct tgctgggcga ctttggctgc cgcaacggcg
    27061 tcatccaggg acgcgaaaac gcccatctca tgaacggcgg cggacggcgt gtcactgctt
    27121 tgcattttca gcagtaccgc tttcaccacc tgttcaatat cctgttgatt catgatgttc
    27181 tgccttattt gtggaaaatt acctgaccgc cagacaccac ctcatcgaca atgccaatca
    27241 cgcacagatc gaccggtgac gtttcgcttt tatgcgcctg gcgggcggaa ctgccactca
    27301 ccagtaacac ccactccccg gttcccgcgc caatattgtc gatggcgacg gcgcattgcc
    27361 cgtcaggatt accttgtgga tcaatcattt ccaccatcag caatttgtca tgcgccagtc
    27421 cgtgatggcg tacggtacaa acaatttgtc cagtgacgac tgccagtttc atacccgcct
    27481 ccgtggcgta tttcaggtaa aagctccccc taccctccgc agaaggtaaa atgaaaaagg
    27541 agagagcgtg acgcccgaat caacgtcaca cagggtgatt acaggttgct gctatcgcct
    27601 ttcaggccga tcgggaagac ttcttccagg tcgccgtgcg gacgcgggat aacgtgtaca
    27661 gataccagct cgccgatacg ctgtgccgct gcggcacctg catcggtcgc ggctttacag
    27721 gctgcaacat caccacgaac catggcagta cacaggccgc cgccaatctg cttaacacca
    27781 accagcttga cgcgcgcagc tttaaccatc gcgtcagaag cctcaatcag tgcaaccagg
    27841 ccccgggttt cgatcattcc taatgcttcc attgtgcttt cctctttatc agggtccaga
    27901 acgggaccgt tcattcaacc agtgtttgta aactgctttc gcggttcact tctgtctgac
    27961 gcggcacagc tgccaccagc gccagctcga taatttcctg cacgctacaa ccacgagaga
    28021 gatcgtgcat cggcgcggca agtccttgta tcaatggccc gacggcacga tatccgccga
    28081 gtcgttgtgc gattttgtag ccaatatttc cggcttccag cgacggaaaa accatcacat
    28141 tggccttgcc ctgtagcggg ctggcaggcg ctttttgcgc cgccacttcc ggcacgaagg
    28201 cggcgtcaaa ctgcaactcg ccatcgacta acagctttgg tgcgcgctca cggacgattt
    28261 ctgtcgcctg ctggacattg gcaacgcagg ggtgacgggc gctaccgtta ctggaaaacg
    28321 acagcatcgc cacgcgcggc tcttctccgg tgatggcgcg ccaggtttcg gcgctggcaa
    28381 gcgcgatatc cgccagctgc gccgccgtcg gctgtggtac cacgctgcaa tcggcaaagc
    28441 ccaacgcggg gccactgtac tgtggcagca tcaggaaaat ggaagagaga gttttacagc
    28501 caggttgcaa gccaataatg cgtaatccgg cacgcagcac attcgccgtg gaagagaggt
    28561 tgcccacgat acagacatcc gctttaccgg cgctgaccat tgcggcggcg aacatcagcg
    28621 ggtcggtaag tttttccagc gcatccggcg gcgttttttc gcccgcgcgg gccagccagc
    28681 gatgagcaaa ttcttcccgc attgcgaggt tgccatgcgg atcaatcacc tgtagcccgt
    28741 ccatcgctac gccatgactg agcgcaaact gacgaagttc aaacggatta gcgaccagaa
    28801 tgggcgttgc cagaccttgt tgatgtaaat attgcgcagc tttcagcaca cgttgatcta
    28861 acgcatccgg aaaaaccact ctggcgggcg ctcgcaacgc cagttcacga caacgttcaa
    28921 taatcattgc gtttccccca gtcgttgttg gatctgcttc accgttagcg gcggcttcgt
    28981 tacgctcagg atcatcatca cgtagaccgc gctcgaaagg cggttcagcg cctgcaagat
    29041 gtccgagcgt aatacttcaa agctgcgggt gataaacacc tgcgccgcta cggtttcggt
    29101 ttcccgcact ttggtgcgta gcagattgag caacgcagca tcgcgcccgt ggctggcttc
    29161 cggcaccaga tgatcgtggt cgagatagcg cagcggctga tgagaaagcc gatgcagatc
    29221 ttcgtcagaa agcccgacaa tcgcttgatc gcccagcggt tcccccagcg catcggcacg
    29281 cataatgttg ccaagacgcg aacggatatc cgccagccac ggctgccacg gttctgccag
    29341 ttcaatttgc agccacactg ccagcgcaat ggtgctgtcg agaaccgcgc gaaaacccag
    29401 gcgcggatcg cttttggcga ccattttttc cgccgacagg tgagtcagcg tatccggctt
    29461 ttttgccacc ggctggcggc acagttcgca gcacgcctgc ggatgttcat cgctactggt
    29521 cagcccatga acgggctgcg gctgctgctg ttcatcgtca acaaacaggc ggccctgctc
    29581 gtcaataaac ttgatgcgca gatggcggct ttccagtaac tcccgggcag agggcgtcag
    29641 gcgactgtcc gcagggagat ggatctctgc gccttcgctg agcgtatggt tcgctcttag
    29701 ccatgcttcg gtaatgaaat ctttcatagg gattgccagt tagccggcca ggcgacatac
    29761 aggaatttca cgctggatgt cgtaccaaat tcgatgctgg agcctttcgg gataaacatc
    29821 acgtcgcctg ctttggcgat catggtttcg ccttcgtggc gaacatgcag ctccccttcc
    29881 agcaccatgt cgatttcgtc gtagttcaga gtccacggga agaatgcgtt ctcccactgc
    29941 ataaaaccgg cggccatgct gctgccgtcg tctccggtca caagatcagt caagcccacg
    30001 caatgcggct ctgcgccgtc gaaacgacca aacttgacgc tgctgccatc aatcactttg
    30061 atgccgcctt tgccggtcac cgatttgaag ctcggctgca ttgcaccctg ctctagcgac
    30121 tgtttttcct tcatcacttt ttccatcagc tgcgcgacca ggctttcggt aaactggcct
    30181 tccggcagct gggcaatgat ggtttcgcgg atgcgctggc tttcggtttt atcggctggc
    30241 acgctggcgg gcacggacgc cgttaccggg atcgattcat cacattcggt gatggtaaaa
    30301 cccagtagat ccgccacttc acgggcttcc ggagtaataa tgctggcgcg cagaaccacg
    30361 gacattgcct gttcgccgcg cgcgtgtgct tcacgaatat cattcgctgt gatgagtttt
    30421 ttcacctgct tcctcctgtt tggtgagaga tgccagataa tccaccagtt gctgcacgct
    30481 ttgcgggtcg tggctgttta gctcgaaaat cggctcttcg aagcccgtct caagcaataa
    30541 ctttcgcgtt gctgcgacgt cagcatctgg catgtccgtt ttactgatga cggcgatttg
    30601 ccgtttgatg atgccaatat ccagcaaccc ggcaggtaac cgactttccg ggtcattcac
    30661 gccgtggaca tagatcagca tgtccacatc ctgtagcgtg gtaattaagg cgtgatacca
    30721 gcggggatgg ctaaaatatt cacccggcgt atcaatatcg cccttatcat taaattccac
    30781 ggcctgtgtt tttctggcga gggtataatt cccctgcaac gcattaaata acgttgtttt
    30841 ccctgccccg acggtaccca caaacgcaat tcgtttcatg aatgcctcgt attaactttt
    30901 ggtcatttca caaagcgtat aatttaataa gcgacctaaa ccgctgacgg tttgtgataa
    30961 cgcttcttct actgcgccca ccgagccata aatcaccaat gcaccgctga agcggtcgag
    31021 aaaaccgata tgcacatcag cggctttcag cgctaaatca ccggcgatca tcgccgtttc
    31081 gccaggagtt agcgtcataa tgccaattgc gcccgcatcc ggaacgccga ttttcttcgc
    31141 cagttcctcg ccgggatgcg cgatgagatg cgccagcgtg acctgtttgc cgggcacaaa
    31201 ttcctgaatg atgcgttctt tatccatgag tcgccgcctg tgaaaaactt gcgtgtatcg
    31261 tgacaatttt tcgtcagagt aaataacaaa attcggcaag cgcgtttaaa aggtgaggta
    31321 gatcactaag aatggagaga tatttactgt tatgaataaa ctttcatatg cgacgcatga
    31381 atataaataa aataatatcg agatatttta tattgctttt tttattattc gcaaactcag
    31441 taataagctt tactaatata ttgcagctaa actgcttacc ctgaatattc agggtaagcg
    31501 tgagagttaa aaaagaatta cagcggttgg gtttgcgctt caaccacggc cagcgccacc
    31561 atattgacga tacgacgcac cgatgcgatc ggcgttaaca cgtgaaccgg tttcgccacg
    31621 cccatcagca ccggaccgac agtcacacct tccgagctgg aaacgcgcag taagttgtaa
    31681 ctaatgcggg cagcttccat gttcggcatc accagaatat tggcagaacc tttcaaaggg
    31741 ctgtccggca tacggtcgtt gcgaatcgct tccaccagcg ctgcatcgcc gtgcatttca
    31801 ccatcaatca tcagatctgg cgcacgatcc ctgaccagtt ccagagcctg acgcattttg
    31861 ctcgacgacg ggcagtcaga agaaccaaag ttggagtgcg acaacagagc aacgcgcggc
    31921 tcaataccaa aacgacggac agtttctgcc gccatcaagg tgatctccgc cagctcttct
    31981 gcgtctggtt cgtcattgac gtaggtatcg gcaataaagg tgttaccact cggcagcagc
    32041 agcgcgttca ttgcacctgc ggtgtgaacg ccatcgcgat aaccaaagac atttttcacc
    32101 acgctaaaat gttcatgata atcgcccacc gtaccgcaga tcattgcatc ggcttcccca
    32161 cgctgaacca tgatcgcgcc gatcactgtc gggttactga tcagcgcacg ctgcgcctgt
    32221 tcctgagtga caccgcgacg cttcatgatc tggaagtatt cggtccagta ctctttaaag
    32281 cgcggatcgg attcgttatt gacgatctca aaatcaacgc ccgctttgat ctgcaagccc
    32341 agtttctgaa tgcgcatttc gatcacgttc ggacgaccga taaggatcgg tttcgccagt
    32401 cccagcgtta tcagttcctg agtcgcatgc agaacgcgcg cctcttcccc ttccggcaga
    32461 actacgcgct tcggcgcttt gcgagcctgg gagaaaatcg gcttcataaa caggttggtt
    32521 ttgtaaacga actcagtcag cttgtcgatg tagacgtcga aatcagcaat cggacgcgtc
    32581 gccacgcccg actccatcgc cgcttttgcg accgcaggag cgatcttaac gatcaagcgc
    32641 ggatcaaacg gttttggaat gatgtattcc ggaccaaagc tcagatcctg atcgccatac
    32701 gctgaagcca ccacttcact ctgttctgca tgggccagtt ctgcaatcgc gcgtaccgcc
    32761 gccagtttca tctcttcgtt gatggcggtt gcgccaacgt ccagcgcgcc acggaagatg
    32821 aacgggaagc aaagaacgtt gttcacctgg ttcgggtagt cggaacggcc ggtacagatg
    32881 atggcatccg gacgcacttc tttcgccagc ggcggcagaa tttccggttc cgggttcgcc
    32941 agcgccagga tcattggtgc ccgagccatt ttcttcacca tttcctgggt cagcactttc
    33001 gggccggaac agcccaggaa aatatccgca ccttcaatca catcatcgag ggtacgtttg
    33061 ccgtcatcca ccaccgcata tgcggctttg gtttccgcca tatttggctc acggccctga
    33121 tagataacgc cttttgaatc gcaaaccacg atgttatgtt tttgcagccc cagcgctacc
    33181 agcaggttca tacaggcgat tgctgcggca cccgcgccgg aaaccaccat ccgcacgtcg
    33241 gagatgtttt tctccaccac gcgcaagccg ttgaggatgg cggcagtgct gatgattgcc
    33301 gtgccgtgct gatcgtcgtg gaataccgga atattcatcc gctcgcgcag tttctgttca
    33361 atatagaaac attctggcgc tttaatgtct tcgaggttga tgccgccgaa ggtcggttcg
    33421 agcgcggcga cgacttcaat aaatttgtcc gggtcgagtt catcaacttc aatgtcaaat
    33481 acatcaatcc cagcgaattt cttaaataga acgcccttgc cttccatcac cggtttgcct
    33541 gccagcgcgc caatgttgcc taaccccagc accgccgtac cgttagagat caccgcaacc
    33601 aggttaccgc gcgcggtata tttgtaggct tttagcgggt ctttttcgat ttcaagacaa
    33661 ggtgcggcaa cgcctggtga gtaggccagc gccagatcgc gctgcgttgc cagaggcttg
    33721 gttggagaaa cctggatttt ccctggaact ggaaattcat ggaaatcaag tgcactttgt
    33781 tttaactggt catccatttg gttgttcctt tcacgtaacg ttcacaaata aagtgtgtgg
    33841 gcaacagccc ctgcccacaa cgtggcgcac attattaccc tgccggagtc tacagacttt
    33901 gagcaagtcc aaactctcac cattaatata atgttttggt aataatccta taacactgat
    33961 gttacctgct taatccagca ataccatgcc tgtctgctat gcttttttga tgcgtttagc
    34021 gaaatttctc agaagtgtga attaacgctc tcatctaaca ctttactttt caaggagtat
    34081 ttcctatgaa cgagttagac ggcatcaaac agttcaccac tgtcgtggca gacagcggcg
    34141 atattgagtc cattcgccat tatcatcccc aggatgccac caccaatcct tcgctgttac
    34201 tcaaggctgc cggattatca caatatgagc atttaataga cgatgctatc gcctggggta
    34261 aaaaaaatgg caagacccag gaacaacagg tggtcgcagc gtgtgacaaa ctggcggtca
    34321 atttcggtgc tgaaattctc aaaatcgtac ccggtcgcgt gtcaacagaa gttgatgcac
    34381 gcctctcttt tgataaagaa aagagtattg agaaggcgcg ccatctggtg gacttgtatc
    34441 agcaacaagg cgttgagaaa tcacgcattt tgatcaaact ggcttcgacc tgggaaggaa
    34501 ttcgcgcggc cgaagagctg gaaaaagaag gtattaactg caacctga
//
LOCUS       DAJVTL010000029        34483 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.029, whole genome shotgun sequence.
ACCESSION   DAJVTL010000029 DAJVTL010000000
VERSION     DAJVTL010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34483
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.029"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(56..760)
                     /locus_tag="OQQ26_001380"
     CDS             complement(56..760)
                     /locus_tag="OQQ26_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001698835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
                     /protein_id="HCS1856884.1"
                     /translation="MRNKLSFDLQLSARKAAIAERIAAHKIARSKVSVFLMAMSAGVF
                     MAIGFTFYLSVIADAPSSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRG
                     VISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTF
                     TESVSLGIMCNLMVCLALWMSYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPF
                     AIAIRHFAPLLYSYPL"
     gene            complement(782..2794)
                     /gene="hyfR"
                     /locus_tag="OQQ26_001381"
     CDS             complement(782..2794)
                     /gene="hyfR"
                     /locus_tag="OQQ26_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HyfR"
                     /protein_id="HCS1856885.1"
                     /translation="MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPL
                     PPPFSPVQLIELHVLKSNFYYRYHDDGSDVTATAEYQGEMIDYSRHAVLLGSSGMAEL
                     RFIRTHGCRFTPQDCTLFNWLARIITPVLQSWLNDEVQQVALRLLEKDRDHHRVLVDI
                     TNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSAAHCACL
                     PRCMPGESVLLTQTLQTRQPTLTHRADDLFLWQRDPLLLLLASNGCESALLIPLTFGN
                     HTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQESLQQENHQL
                     SEQLLSNLGVGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARANHQLS
                     PRRDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGD
                     LPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRL
                     NVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRSIDAIPTEALRQLMSWDWPGNVRE
                     LENMIERAVLLTRGNSLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEEER
                     QRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVREVL"
     gene            complement(2824..3237)
                     /gene="hyfJ"
                     /locus_tag="OQQ26_001382"
     CDS             complement(2824..3237)
                     /gene="hyfJ"
                     /locus_tag="OQQ26_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 assembly chaperone HyfJ"
                     /protein_id="HCS1856886.1"
                     /translation="MTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGV
                     IDCLNVAFRCPLTEYEDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFAPLA
                     DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA"
     gene            complement(3230..3988)
                     /gene="hyfI"
                     /locus_tag="OQQ26_001383"
     CDS             complement(3230..3988)
                     /gene="hyfI"
                     /locus_tag="OQQ26_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfI"
                     /protein_id="HCS1856887.1"
                     /translation="MSPVLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGC
                     NACEIEIFAAITPVFDAERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDH
                     KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ
                     QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAVEREARRLAGYRQGREICDRLLRHLSDD
                     PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD"
     gene            complement(3985..4530)
                     /gene="hyfH"
                     /locus_tag="OQQ26_001384"
     CDS             complement(3985..4530)
                     /gene="hyfH"
                     /locus_tag="OQQ26_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit H"
                     /protein_id="HCS1856888.1"
                     /translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG
                     ACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN
                     KADLYTRATFHLQRCSRCERPFAPQKTVALAAELLAQQQNAPQNREMLWAQASVCPEC
                     KQRATLINDDTDVPLVAKEQL"
     gene            complement(4540..6255)
                     /gene="hyfG"
                     /locus_tag="OQQ26_001385"
     CDS             complement(4540..6255)
                     /gene="hyfG"
                     /locus_tag="OQQ26_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfG"
                     /protein_id="HCS1856889.1"
                     /translation="MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL
                     LPDVVHYLYYQHDGWLPVLFGNDEQTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR
                     EFPSVTPRVPAAVWSEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRL
                     RPEPTTDSETYAFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV
                     HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI
                     LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGG
                     VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDYSPV
                     GPLIRGSGFARDLRFDPPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFA
                     LDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANW
                     PVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRN
                     RSPLK"
     gene            complement(6245..7831)
                     /gene="hyfF"
                     /locus_tag="OQQ26_001386"
                     /pseudo
     CDS             complement(6245..7831)
                     /gene="hyfF"
                     /locus_tag="OQQ26_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
     gene            complement(7836..8486)
                     /gene="hyfE"
                     /locus_tag="OQQ26_001387"
     CDS             complement(7836..8486)
                     /gene="hyfE"
                     /locus_tag="OQQ26_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HCS1856890.1"
                     /translation="MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
                     FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIQEKALFGPAMMALLA
                     ALIVLLCAFVVQPMKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
                     GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
     gene            complement(8498..9937)
                     /gene="hyfD"
                     /locus_tag="OQQ26_001388"
     CDS             complement(8498..9937)
                     /gene="hyfD"
                     /locus_tag="OQQ26_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfD"
                     /protein_id="HCS1856891.1"
                     /translation="MENLALTTLLLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLS
                     LISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTD
                     KNREHPHNGTNRYYAFLLLFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDK
                     AQLSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSELHGDARYLVYGGILFAAW
                     GKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGM
                     VMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIV
                     NHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGF
                     FSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAA
                     PLPGSMRLVLIVLIVMSLISSAIAATWLQ"
     gene            complement(9919..10902)
                     /locus_tag="OQQ26_001389"
     CDS             complement(9919..10902)
                     /locus_tag="OQQ26_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory chain complex I subunit 1 family
                     protein"
                     /protein_id="HCS1856892.1"
                     /translation="MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRG
                     PGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG
                     GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA
                     GSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE
                     YSGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV
                     LASIAENTLARGRFFTHSPCDLAWLQPCCACMGLLVNRSVRSTDGIWKILL"
     gene            complement(10913..12931)
                     /gene="hyfB"
                     /locus_tag="OQQ26_001390"
     CDS             complement(10913..12931)
                     /gene="hyfB"
                     /locus_tag="OQQ26_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
                     /protein_id="HCS1856893.1"
                     /translation="MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGV
                     IGIISGITQLHAGVTLVARFATPFDFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTY
                     MREYEGKGAAAMGFFMNLFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTS
                     INAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGF
                     GAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWG
                     ILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMDGLSLHDPLLT
                     VVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDLEKMGALAKRMPWTAAACLIGC
                     LAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKM
                     YGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTN
                     TPPVTVASGIALVPGTFHTRVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAW
                     ACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPF
                     WDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV"
     gene            complement(12931..13548)
                     /gene="hyfA"
                     /locus_tag="OQQ26_001391"
     CDS             complement(12931..13548)
                     /gene="hyfA"
                     /locus_tag="OQQ26_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HCS1856894.1"
                     /translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST
                     LTAPVVCHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGS
                     RPVNAHAQYVFQAEGSLKDGEENVPPQHALLRWEPGVQTVAVKCDLCDFLPEGPACVR
                     ACPNQALRLITDDSLQRQMKEKQRLAASWFANGGEDPLSLTQEQH"
     gene            complement(13801..14271)
                     /gene="bcp"
                     /locus_tag="OQQ26_001392"
     CDS             complement(13801..14271)
                     /gene="bcp"
                     /locus_tag="OQQ26_001392"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HCS1856895.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAITP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
     gene            complement(14271..14843)
                     /locus_tag="OQQ26_001393"
     CDS             complement(14271..14843)
                     /locus_tag="OQQ26_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HCS1856896.1"
                     /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
                     ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            14989..15867
                     /gene="dapA"
                     /locus_tag="OQQ26_001394"
     CDS             14989..15867
                     /gene="dapA"
                     /locus_tag="OQQ26_001394"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HCS1856897.1"
                     /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
                     TGESATLNHDEHADVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
                     KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
                     KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
                     SGRETVRAALKHAGLL"
     gene            15884..16918
                     /gene="bamC"
                     /locus_tag="OQQ26_001395"
     CDS             15884..16918
                     /gene="bamC"
                     /locus_tag="OQQ26_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708316.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HCS1856898.1"
                     /translation="MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEA
                     APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGD
                     TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAAN
                     AAQNRASTTMDVQSATDDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
                     AVTYKPLSDSDWQELGASDPGLASGDYKLQVGNLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFSK"
     gene            17131..17844
                     /gene="purC"
                     /locus_tag="OQQ26_001396"
     CDS             17131..17844
                     /gene="purC"
                     /locus_tag="OQQ26_001396"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HCS1856899.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
                     KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
                     VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
                     GGLIEAYEAVARRLGVQMD"
     gene            18012..18875
                     /locus_tag="OQQ26_001397"
     CDS             18012..18875
                     /locus_tag="OQQ26_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HCS1856900.1"
                     /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
                     LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG
                     KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQ
                     QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
                     PAQCNTFGKSI"
     gene            18890..20905
                     /gene="tmcA"
                     /locus_tag="OQQ26_001398"
     CDS             18890..20905
                     /gene="tmcA"
                     /locus_tag="OQQ26_001398"
                     /EC_number="2.3.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cytosine(34) acetyltransferase TmcA"
                     /protein_id="HCS1856901.1"
                     /translation="MAELTALYTLTAQMKREGIRRLLVLSGEEGWCFDHALKLRDALP
                     GDWLWISPQPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
                     VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNDAILWRQNQPFSL
                     AHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPGVAAVTAARGRGKSALAGQLISRIAG
                     SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
                     SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
                     VFDDENFTHTLQGNIVISAFEQTLWRSEPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
                     GQHFLQAAGENEIAGALWLVDEGGLSQELSQAVWAGFRRPRGNLVAQSLAVHGSNPLA
                     ATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTHDLDYLSVSFGYTGELWRFWQRCG
                     FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVD
                     PLNDAILSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ
                     LCTTLKLSGRKMLLVRQREEAAQALFALNNVRTERLRDRITQWQFFH"
     gene            20979..21666
                     /gene="ypfH"
                     /locus_tag="OQQ26_001399"
                     /pseudo
     CDS             20979..21666
                     /gene="ypfH"
                     /locus_tag="OQQ26_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311362.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
     gene            complement(21776..21976)
                     /locus_tag="OQQ26_001400"
     CDS             complement(21776..21976)
                     /locus_tag="OQQ26_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HCS1856902.1"
                     /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP
                     HRDFNDKWDDDDDWPKKDQPKK"
     gene            complement(22004..23131)
                     /gene="dapE"
                     /locus_tag="OQQ26_001401"
     CDS             complement(22004..23131)
                     /gene="dapE"
                     /locus_tag="OQQ26_001401"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HCS1856903.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAFGFTVERMD
                     FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
                     GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
     gene            complement(23135..23491)
                     /locus_tag="OQQ26_001402"
     CDS             complement(23135..23491)
                     /locus_tag="OQQ26_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HCS1856904.1"
                     /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
                     FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCAPGKPM
                     LLGFSDSSYQQFFHEV"
     gene            23872..23931
                     /gene="ypfM"
                     /locus_tag="OQQ26_001403"
     CDS             23872..23931
                     /gene="ypfM"
                     /locus_tag="OQQ26_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HCS1856905.1"
                     /translation="MIERELGNWKDFIEVMLRK"
     gene            complement(24030..27143)
                     /gene="acrD"
                     /locus_tag="OQQ26_001404"
     CDS             complement(24030..27143)
                     /gene="acrD"
                     /locus_tag="OQQ26_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
                     /protein_id="HCS1856906.1"
                     /translation="MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVR
                     VTANYPGASAQTLENTVPQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDE
                     AVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS
                     NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQ
                     LGGTPSVDKQALNATINAQSLLQTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYD
                     YLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGLEYKVAYETTSFVK
                     ASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNT
                     LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVLVSMILTPALCATLLKPLKKGEHHGQ
                     KGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFLPLE
                     DRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATIGSGPGGNGQNVA
                     RMFIRLKDWSERDSKTGTSFAIIERATKAFNKIKEARVIASSPPAISGLGSSAGFDME
                     LQDHAGAGHDALMTARNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVA
                     IDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPNDINLWYVRNKDGGMVP
                     FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLE
                     WTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLAT
                     WMRRLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPI
                     LMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRF
                     PLKPRPE"
     gene            complement(27345..29057)
                     /gene="narQ"
                     /locus_tag="OQQ26_001405"
     CDS             complement(27345..29057)
                     /gene="narQ"
                     /locus_tag="OQQ26_001405"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005011308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HCS1856907.1"
                     /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL
                     NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG
                     IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDSSLPNELGLLAKTFNQM
                     SSELHKLYLSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD
                     NEAAEYLELNVGDNWRISEGKPTPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN
                     SVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP
                     EDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
                     LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD
                     NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEGEGNT
                     PAEV"
     gene            29263..31142
                     /gene="aegA"
                     /locus_tag="OQQ26_001406"
                     /pseudo
     CDS             29263..31142
                     /gene="aegA"
                     /locus_tag="OQQ26_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416963.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     AegA"
     gene            31138..31899
                     /locus_tag="OQQ26_001407"
                     /pseudo
     CDS             31138..31899
                     /locus_tag="OQQ26_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416961.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
     gene            complement(31976..33970)
                     /gene="tkt"
                     /locus_tag="OQQ26_001408"
     CDS             complement(31976..33970)
                     /gene="tkt"
                     /locus_tag="OQQ26_001408"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HCS1856908.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDSETEGWFTDDTAKRFEAYHWHVIHEIDGH
                     DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
                     GWHHPPFEIPKEIYHAWDAREKAQQSWNEKFAAYKKAHPQLAEEFARRMSGGLPKDWE
                     KTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSL
                     KEDPAGNYIHYGVRKFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKAR
                     QIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAVERHNG
                     PTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEMEITLQAAEK
                     LAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVAARVAVEAGIADYWYKYVGLKGA
                     IVGMTGYGESAPADKLFPFFGFTAENIVAKAHKVLGVKGA"
     gene            complement(33990..>34483)
                     /locus_tag="OQQ26_001409"
     CDS             complement(33990..>34483)
                     /locus_tag="OQQ26_001409"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HCS1856909.1"
                     /translation="LTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVE
                     EDPGVKSVRNIYDYYKQHHYETIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKV
                     SPVVRKLIPPSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLA
                     AKL"
BASE COUNT         8521 a         9166 c         9161 g         7635 t
ORIGIN      
        1 gatcatggac gactgggggc agtaatcatg ccgggtctgg ctggctaaca ccccattata
       61 aggggtacga ataaagtaac ggggcgaaat ggcgaatggc aatggcgaac ggaatcacaa
      121 acaaattggc gatacagtgc tcaaagccac tggcgacaaa cagggtgatg ggcaaaatca
      181 tggcgacgat tttgtcgcat aacgaacgcc cgcaataact catccacagc gccaggcaaa
      241 ccatcagatt gcacataatg ccgaggctga cagattcagt aaatgtatga tgcattttgc
      301 cctcggcgca gtgtaaaaca gcgactcccc acatcgcgtt ttcactcatc accagcccgg
      361 aaaaccagat taacaaactg aaacaggcaa tacctgccag attaccacag gccaccagaa
      421 gtgcgttaat cagccaagtt cgccaactaa taacgccccg actttttgcc atcaccgtca
      481 ttaccgacga ggtgaacagg ctggtgccgc aaaccgccag caaaataaag ccgagtgtaa
      541 agcaaaggcc gcccaccaga tgggttaatg cctgtgaaga cggggcatcg gcgataacgg
      601 aaaggtaaaa agtaaatccg atcgccataa acacgccagc ggacatcgcc attaaaaaga
      661 ccgacacttt actgcgggca attttatggg cggcaatccg ttcagcgatt gccgcttttc
      721 tggcgctcaa ctgcaagtcg aaagagagtt tgtttctcat gcatactcct gcaaaagcag
      781 attacaacac ctcgcgaacc gagatcccca gacgctgcat tcgtgacagc agcgtggtgc
      841 gcttcatccc taatcgtgtc gccgcgccac ggggcccggc aacaatgcca ttggtttctc
      901 gcaatacctg aacaatgcgc tgacgttctt cttcgtcatt ctctggcgtc gtcgggtgca
      961 gcaactgcgc cattgaactg cgaagcgctg aatcttcatt tagcgtcggc agtaaacggc
     1021 tttgtcggac attaagatgt aaattcagac tgttaccgcg agtcagcagt accgctcgct
     1081 caatcatgtt ttccagctcg cgcacgttgc ccggccagtc ccacgacatc aactggcgta
     1141 gcgcttcggt cgggatggcg tcaattgaac gattcatatg gcgcgccatt ttttgcgtga
     1201 aatgctttgc taaaagaggg atatcttccg gacggtcgcg tagcggcggc aattccagtg
     1261 ggaagacatt caggcgataa aagagatcgc tgcgaaactg gcgatcttca accatttgcc
     1321 acaaatcacg gttggtggcg gcaatgactc tgacattcac cgggatcgtt ctactcccgc
     1381 cgagacgctc aatctcccgc tcctgcaata cgcgcagcag tttaggctga agttctaacg
     1441 gcagatcgcc aatttcatcg agaaacaacg tgccgccatc ggcaatttca aaacgaccac
     1501 gatgggtatt aatcgcacca gtaaacgccc ctttgtcatg accgaataac tcactttcca
     1561 gaagactggc ggggatggca gcgcagttga ttttgaccag cggcttgtcg cgtcgcgggc
     1621 taagttgatg gttcgctctg gcgatcacct ctttgccggt tccggtttca ccgcaaatca
     1681 acaccgtact gtcgctcttc gccacaatat ctacctgctg gagcaggtct tccattgcct
     1741 ggctttgata gataatgtca ccgacgccca gattcgaaag gagctgctcg ctaagctggt
     1801 ggttttcttg ctgcaaactt tcctgcaaat cggtcatgct acgccaggca tcggcattgc
     1861 caacggcaat agcgatgcga tcggctatgt gttgtagtag ctggcagttt tcctcactaa
     1921 agagagtgga agaggtatgc gccagcaaca atgcacccgg tgtatggttg ccaaaggtaa
     1981 gcggtatcag gagcgcagat tcgcagccgt tagatgcaag taagagtaat aacgggtcgc
     2041 gttgccagag aaacagatca tctgcacggt gcgtcaaggt cggttgtcgg gtttgtagcg
     2101 tttgtgtcag caatacactt tcgccaggca tacagcgtgg cagacacgca caatgtgcgg
     2161 cagaaagatc gctgcaccac aggctgaact tctcgttctt tcgatgatcg cccagtacca
     2221 tactgactga agccagaccg aaaaaatgat ggatctcacg ggcgacgtca gcgatcagat
     2281 cgtcgagatc aagatgtgac agcactgcat tagtgatatc caccagtacc cgatgatgat
     2341 cgcgatcttt ctccagcaaa cgcagcgcca cctgctgtac ttcatcattg agccatgatt
     2401 gcagaaccgg ggtgataatg cgtgccagcc agttaaacag tgtgcaatcc tggggagtaa
     2461 aacggcagcc gtgggtgcga ataaagcgta gctccgccat tccactactg ccgagaagga
     2521 cggcgtgacg cgaataatcg atcatctcgc cctgatactc tgctgttgcc gtcacatcgc
     2581 tgccatcatc atggtagcgg taatagaagt tgcttttgag aacatgcagt tcaataagtt
     2641 gtaccgggct gaacggcggc ggcagcggga tgaaggcgcg taataaagac gccttaccgt
     2701 gtttctgcgc taaccgctcc gcgagcattc cgtttaccgc ttcaattgtt attccttgcg
     2761 gcggggcaaa catcgcctcg tctgacatag ccatcaacag tccttattaa tgagaaatcc
     2821 ttctcacgca atttttctgg ccatcagata gatggccggt tcctgcacaa tttcatccaa
     2881 cagatgaatg aattgaatgc tacgcgcctg ccacacagac gtcgcgtcat ctgccagtgg
     2941 cgcgaatgcc cgggtcaaca gggcggtgtg gctggcgtca ataacaatct caccaaaagt
     3001 catcaccccc agcatcttac gtcgggcttg ctcctcttcg accagtgcaa gccaatcttc
     3061 gtattccgtc agtgggcagc ggaaggcgac attcagacaa tcaatcacgc caacgtgatg
     3121 accgatagcc agcgagtaat acattacctg agagctgtgt tccggcatct cgtcgctact
     3181 ggcgacaaac ttttttcgca gcgtccagaa aacaatttcc ccgcactctt cagtcatgta
     3241 acccccggag tacgcgaaag agttgctgaa cgatactatt gagacgtgga tcgtcggcat
     3301 cgcgcaacca ggtgttaacc cgatttcctg taggatcgtc gcttaaatgg cgcaggagcc
     3361 gatcgcaaat ttctcgcccc tgacgatagc ccgccagccg cctcgcttct cgctcaacgg
     3421 cgatacgctg tgatggcggg atctgcggcc acaacggttg catagtcacc ccggtgggat
     3481 cgcgataatc caccgcgtga atcttctgtt gcagcaaacc gagcgccacg gcgaaaccgt
     3541 gaatggtggc ggccggtgtt ggcgggcagc cggggatcca aacatcaatg gggacaatgg
     3601 tgtcgctgcc accccagacg ctgtagagat cgtggaaaat accgccgccg acaccgcacg
     3661 cgccgtagga aacacagatt ttatgatcgg gggcagactc atacgcccga agtgcaggca
     3721 tacgcatcgc ccgggtgact gcgcctgtaa ataacaaaat atcggcgtga cgcggtgatg
     3781 aaataacctt aatgccaaaa cgttctgcgt cgaatactgg tgtgatggcg gcaaaaattt
     3841 cgatttcaca ggcgttgcag ccgccgcaat cgacgcgata aacgtaagcc gagcgacgga
     3901 tatcctgtag caaatgctgc ttcatctttt gcgtttgctc gtccagcgtg atgggctggc
     3961 tgacatgttg tgtaagcact ggactcatag ctgctcctta gccaccagcg gtacatctgt
     4021 atcgtcgttg atcagcgtcg cgcgttgttt gcactccggg cagacgctcg cttgcgccca
     4081 taacatttcg cggttttgtg gcgcattttg ttgctgtgcc aacaattcag cagccagtgc
     4141 gacggttttt tgcggggcaa acgggcgttc gcaacggctg caacgttgta gatggaacgt
     4201 cgcgcgggta tagagatcgg ctttattggt gacggtcagt tcaaagttat tggtaagctg
     4261 gatggctctg gtcgggcaca cttcttcaca acgtccgcag taaatacaac gccccagata
     4321 gagctgccag gtgcgcgaat tttgctggtc gtcggtctgg atagtcagcg catttgccgg
     4381 acaagcacag gcgcaggcac cgcaggcaat acattggctg ggcatcaggt ccggtttccc
     4441 gcgaaagcct gggctgacct ccagtggcgc gaagggatat ttcaccgtcg cggttccggc
     4501 gcgcataata gttttcagta acttcagcat cttctgtcct tacttcagcg gcgaacggtt
     4561 acgatcaatg ccgtagcgtt cgatctcttt atacggcacg gtttttgact ggcgcttgcg
     4621 cacatctacc agcgtcacac ggtcggtaca ggagtagcag ggatcaaggc taccgataat
     4681 cagcggtgcg tcagaaacgg tattgccgcg cagcatgtaa cgcaacaccg gccagttggc
     4741 gtaggtggcg gcacggcagc gccagcggaa caatttttgg ttatcaccga gcatgctcca
     4801 gtgcacgtct tcaccgcgtg gcgcttcaac aaagcccagc gcgaatgcgt gaggtttata
     4861 gctaaagcct tcggtcagca gtggggtatc cggcatgttg tcgagggcaa attccagcat
     4921 tgccagcgaa tcaaacgtct ctttgacacg gaccatcacg cgggagaaaa catcgccgcc
     4981 ggtaaaggta aacagtgttt ttggaatatt gccgtagtcg gcgtaggggg gatcaaagcg
     5041 caaatcacgg gcaaaaccac tgccgcgaat cagcggccct acagggctat aatcacgggc
     5101 gatttgtcgg tcgagaatgc caatgccctg agtgcgttgt tccatattcg gcgtagcaag
     5161 cagcatctct accagctccg acacgtcggc gcgcatctcg cgcaccagtt tcagcgtttg
     5221 cagacgttgc tctttgagaa tatcgcggcg aacaccacca atcagattca gaccgtaggt
     5281 tttacgcgac ccggtcagca attccgccat cgtcatcgac ttttcccgca cgcggaaaaa
     5341 ttgcataaag ccggtatcaa aaccaacaaa atggcaggag aggccaaggt tgagcaaatg
     5401 actgtgtagc cgttcgactt ccagcagaat cgagcgaatg gtatgcgctc gttgcggcac
     5461 ctcaatcccc agtgcatttt caaccgagtt ggtataggcc acactgtggg caaaaccgca
     5521 aatcccacac acgcggtctg ataagaaggt cacttcgttg tagcccatcc gcgtttctgc
     5581 cagtttctcc atgccgcgat ggacataaaa caggcggtaa tcagcatcga caatttgctc
     5641 gccatccaca aacaagcgga agtgacccgg ttcatcggag gtgatatgca gcgggccgac
     5701 agggatcacc cgcgcatcgc tgttgccctc attgataaac gcatacgttt cggaatctgt
     5761 cgtcggttca gggcgcagtc gataatccat cgcatctttg cgcagcggat gcatatcttc
     5821 cggccagtca tcgggcaaca ccaggcgacg ctgatccggc aggccaaccg gaatcagccc
     5881 gtacatatcg cgaatttctc gctcgctcca gaccgcggca ggaacgcgcg gtgtgactga
     5941 cggaaactcc cgactgtcgg catcgaccag tgccttcacc acgatccagc atttttcggc
     6001 cccttccatt gaaagggcat aataaaccgc gtaatgaccg ttaagtgtct gctcgtcgtt
     6061 gccaaacagg actggaagcc agccatcatg ttgataataa agataatgta caacgtcagg
     6121 cagcagattg attttcaccg taatggtgac ctgttcaggc gtttgtcgct cttcatccag
     6181 caccgcgccg gggaactgcg ttttcagggc ggcgagaatc gcttcgccac gatttgacga
     6241 tgaattaacg ttcactgtgt ttctccgaaa cagatgcggt gcctgaaggc aaaaaatcat
     6301 gccaggtgct acgttgtgca ggcaggtcgt gcgtccctga gaggactata gtggaagcgc
     6361 ccgccaggat cctgatgaca ggttgtggaa tatgcattcc catcgccagc atcatgacca
     6421 gcagaatcac cattggcgag gtggtcaacc agccgagatc accccggtta acggcctgcg
     6481 gcggtttcgc cattaacacc cgcgcagcca tccgtaccag gcccgccagc atcagcgtta
     6541 acagcaataa cagcaggacg ataatcagca ggtgattacg tgccagtcct gcggtaacgg
     6601 tcataaattc gctaagaaaa atgttgaagg gcggcatccc tgccagcgcc agcgccagcg
     6661 caccgccgcc aaacagcacg gcggtaaatg gcatgatttt gagcatccca cagacgacgt
     6721 tgagatcgcg cgtgccgtac ttgagcagta cattgccgga accgcagaac agcagcgttt
     6781 ttgccagact gtggtttaag gtgtgcagca gcgcggcaaa aattcccagc ggcccgccaa
     6841 tgcctagcgc caccgcgacc agccccatgt tctccacgct ggagtacgcc agcagacgct
     6901 taatgtcccg ctgtaccaga atgaaaaatg ccgccacggc aaccgacaac atgccgaaga
     6961 tgagcaacaa ccggttgggg aaatcgctgc cgatggcttg gcaaataatg atgtaatagc
     7021 gaatcagcac caacagcgcg cagttcagca atacggcgga gagcagggcg ctgaccggac
     7081 tcggcgcttc actgtgagca tccggcagcc aggcgtgcat gggaaatagc ccggttttgg
     7141 taccaaagcc aattagcaca aacacaaagg ccaacagcat taatgttggg tcaagcaagg
     7201 acgattgctt aagaacctcg ctccagaata tcgccatttc tgcctgcggc ataacgctgg
     7261 cggcgttggc gtataccagc acggtaccga acagaccaaa agcgacacca acagtacaaa
     7321 taatgatgta cttccatgct gcttccagcg atgaacgctg accgtaaatg cctaccagaa
     7381 acgccgagct taaggtggtg gcttcgatcg ccgcccacat cacaatcagg ttattgctgg
     7441 taacaaccag cagcatggtg aacaaaaaca gatggaagaa accgtagtaa tcgcacagcg
     7501 taacgggtga aagctcgccg tgctccactt catgacgcat gtagccaatc gagtaaacac
     7561 cggtgagaaa gccaatcaca ccaagaatgg cgaggaacaa accgcccaga ccatcaatat
     7621 gaagtcacag tcccgcagcg aatatttctc ctgcatcagc ggcagtttgg accacccaga
     7681 gtgccagaat cagcagcagt gtgatcccta agctatgtaa tacggtcacc gtacaagtcg
     7741 cagagagccc ccgtttccgg caggcaaaac agagcagcga aaaaagcagc ggcgtgagca
     7801 ggagtaaagc gaacatcaca gaataactca tctcattatc ccttcagcgc ggtcaagttg
     7861 ttcacgtcca gcgtgccgtg ggtacgccat atttttcttg ccagtaacac catcacaatg
     7921 acggcgaaga tggcgtcggt agcgatacct atttccacca gttccggtgc tcgccaggca
     7981 agaagcgcca gcaccagatg ggagccgttt tccatcaggc agtaaccaaa aatttgccgc
     8041 aggatattgc gctggctgac aatgcacagc aggccaagca gaaaatgacc taacgctacc
     8101 gccagcgccg gtttcagccc ggtagccatc ggtagcttca tgggctgaac gacaaatgcg
     8161 caaagcagga caattaacgc cgcgagcagt gccatcattg ccggaccgaa taacgctttt
     8221 tcctggatgt tctggggaat atttcgtgca gcgtaagtca tgattaacgg taccagcagc
     8281 actttggtga taaaggcgct ggcggaccag atcagcagtt gctctgcggc gaacaggcac
     8341 gagagggtgg cgaaaataga caccagcacc agtgactggc aggcgtaaaa tccgcatgac
     8401 aggcgatagc ttttgacgct aatcacaaac agcgatgtca gcatcatcag tcccgccaga
     8461 ttatttacga tcatagaacc ggtcattcat catctcctta ctgcaaccag gtcgcggcga
     8521 ttgcgctgga aatcagcgac atcacaatca gtacaatcaa caccaggcgc attgaccctg
     8581 gcagcggtgc ggcatcggcg acggcctcgc tcggtttgcc aggcacaacg cgaccaaacc
     8641 agcgaataaa ccaggcgaaa ctggcgaccg attcaatcat cagcagaatc atggcgggca
     8701 gcaggatcca gtactccact gacaacgcaa aaccggcagc aaacagcggg aatttactga
     8761 agaagccgtt gaacggcggc acgccggtaa tcgccagcgc tgccacgcag aaacccacgc
     8821 ctggcaacgg cagggtgtgc aatacgccac gcagacgcgg caacaagcgc gtgccgcagc
     8881 tgtaactcag cgcacctgct acaaggaaaa acaggctttt agcgaacgcg tggttgacga
     8941 tgtaggcgat gctgccctcc agcgccagcc gcgagccgaa gatggagagc gacaaaccga
     9001 agaacatcca gccaagttga gtgatggtcg accaggccag caaccgcttc atatcctgct
     9061 gtggcaaata catcagaaat ccataaagaa tggtgaccag cgccatgacc atgccaacgc
     9121 cgccaatcac atgcgggata ttgccgccgt cgataatggc gcgggcaaaa atgtaaacgc
     9181 ccactttcac catcgatgcg gcgtggagat aggcactgat cggtgttggc gcttccattg
     9241 catccggtag ccacgcttgc atcggtagct gggccgattt cccccacgcg gcaaacagga
     9301 tgccgccata aaccagataa cgtgcgtcgc cgtgtaactc gctcatcgcg ctaagcgcaa
     9361 acgttccggt ctgcaaaaac agcgtggcgg cggcaagata caaccccaac gagccgatat
     9421 gagtgataag taacgctttt agtgctgaaa gctgtgcttt atcgctctgg taataactga
     9481 tcaacgccca ggagcagccg cccgtaattt caaaaaacaa caactgaccg agcagcgtcg
     9541 aggagagtac cagtcccgcc atcgcgccga taaacaacag caaaaatgcg taataacgat
     9601 tcgtgccgtt atgcgggtgt tcgcgatttt tatccgtcag ataacccgtg gagtagatcg
     9661 tgaccagcaa accgagaaac accaccacaa acagaatcag cgtactcacg cgatcaatga
     9721 ccaggccaaa caatgccaca tcccccacgt tgaccaacgt caacgtgacg gcaactttat
     9781 cggcctgata aaacgcggag atcagtgaca acatgcacag cgtggtcagc gcggcgaaca
     9841 aaacccccca ttcggcggcc cgacgttgtg gcgaaaacga aacgaccagt gcgccgataa
     9901 aaggcagcaa taacgtcgtc agagcaagat tttccatatt ccgtcagtgc tccttacaga
     9961 ccggttaacc agaagaccca tgcaagcgca gcaaggctga agccaagcca ggtcacatgg
    10021 tgaatgagta aaaaaacgcc cgcgtgccag cgtgttttct gcgattgagg ccagtacaaa
    10081 aatcagcaaa accttgagca gcgtaacgac aagtgaagtc agcaggcagg cgagagaaag
    10141 ttcttgcgcg cgcccaaagg gcagaaacag ggccacaaac agtgctgcca tcacgacctg
    10201 tttcagcccc agcccccatt tcgctagcgc cagcccggca ccggaatatt cggtcagcgg
    10261 gccttcctgt aattcctgtt ctgcttcagc aacatcaaag ggaatttttc ccatctcaat
    10321 gaagcaggca aaaccacagg ccagtaacgc cagtacggtg gttagcggcg agttccagcc
    10381 catcgccagc gtattgctga tcatctcgat atgcgtggaa cctgctatca gcgccaatac
    10441 cagcagtgag agaataagca ttggttcgac cagaatgccg agcgtcaact cgcgactggc
    10501 accgactccc gcaaacggac ttccggtatc cagcccggaa agagcaaaga aaaaacgaaa
    10561 cagggcaaga agatagataa gggtgatcag atcgccgccg cccgcaaaag gggaaacggt
    10621 aataaatagt ggtaaggcca tcgccagcac cagcatgctg ctgattaata cccacggcat
    10681 taggcggaac atcagacctg aagatgtcgg cgcaacttct tggcgtttaa acagtttgtg
    10741 gatatcgcga taatcctgcc agatccccgg cccgcggcgg gagtgcatac gcgcgcgtat
    10801 ctgccgggaa atacccgtaa aaagtggggt tagcatcagc agaatcacgg cctgtgctaa
    10861 cgcaaaaatg actagatatc cgtcgcaaag agtttgtctc atggtgattt ccttagacgg
    10921 caatagcgat tagcagcaca accagtgcgg cgaccacata caggcaatag agacgaaagt
    10981 cgccgctttg cagatgctgt atttctttgg ccagccgttg ggtggcgctc acgatggggc
    11041 ggatcacccg ctcatcccag aagggttctg tgctctgagc cctggcggtg acgtgcgcaa
    11101 gacctttatt tagcctcagc gtagggtcga gctgttgtcg tagacgaaat aacgcagaga
    11161 agaccacacg cagcggctgc atcacgccat tgcctgacgg agccatcgcg ttttcccagc
    11221 cgtagccgca tgcccaggca tctcctgtgc gacgaaacgc tgcgcggcgc gaacgacacc
    11281 acagccagta aaggccaggc agcaaaggca tcgccagtag taacagcaac agtaatgaag
    11341 gagtgacccg tgtatgaaac gtgccgggta caagtgctat tccgctggcg acagtgacgg
    11401 gaggggtatt ggtaaacgca tgggcaatat gcattatctt cggtgccagc caactggcac
    11461 taagcgcaat taatacgcag agtgccgcga gcagtagcat ggcgacgatc atcgtatttg
    11521 gcacttcctg tgcctcttca gcgtgtgtac tgcgcggcgc accacagaaa gtaataccgt
    11581 acattttgac gaagcacatt actgccagcc caccagtgac tgccagcatt accatagcaa
    11641 taggacccgc aagttgtagc gctacggctt ccacacgact tagtgagaac agcgactgcc
    11701 aggtgtacca ttcgctgata aaaccattca gcggaggaat ggctgatatc gcgaggcaac
    11761 caatcaggca tgctgcggct gtccacggca tccgtttcgc cagtgccccc attttttcca
    11821 ggtcgtgggt atgcaaacgc gaaataatcg cgcccgcgcc gagaaatagc agccctttga
    11881 acagcgcatg gttgagcaga tgaaacagtg cgccgagcag tccaaccacg gtgagcagcg
    11941 ggtcgtgcag tgacagaccg tccatcgcca caccgactgc cagcaaaata atgccgacgt
    12001 tttcgacggt actccaggcc agcagccgtt tgatatcctg ttccgccagc gcatatagca
    12061 cgcccaggag cgcggagatt gcgccgatcg ccatcaccag aatgccccac cacagaggca
    12121 aacccgtttg cgccagcaga tccatcgcta ctttcaggat gccgaaaata ccgattttga
    12181 ccattacgcc agacatcaac gccgaagcgt gcgatggtgc ggcagggtga gcgcgcggca
    12241 accagctgtg caacggcatc atcccggctt tcgcgccaaa accgaaaaag gccagcagaa
    12301 acaccgccga cgccagcccc ggagaaagtg aaagcgtgcg gaaactggca aaatcgaggc
    12361 tgccgctttc gcgccccatc agcaagaagg cgatcataat cagcaccgat ccggcgtggg
    12421 cgataaaaaa gtagagcatg ccagcgttga tcgacgtttt atcctgcctg gcaatgacca
    12481 gaaaccagga agacagcgac atcatttcaa acagcacgat gaaccaaaaa gcgttgtcca
    12541 tcaccagcag ggcaaccatc gatgcgatga aaagattcat aaagaagccc atcgccgccg
    12601 cgcctttgcc ctcgtattcg cgcatataag tcaatgaata gagcgaacaa accaccacca
    12661 gcaaggagat aaccagcacc ataaatgccg agaggctatc cattcgcagg gttaaatcgg
    12721 caaagtcaaa aggggtggca aaacgggcga ctaaagttac accagcatgt aattgcgtaa
    12781 ttccgctgat gatgccaatc acgccgccca ccagcgatgt gatgccggaa agcttaatag
    12841 ccagtctgtc cagaccgagt aaaaacagcg aagccagact ggcaaacaga tagaggatca
    12901 gcgaccaggt taataattgc agggcatcca ttagtgttgc tcctgagtga gggaaagggg
    12961 atcctccccg ccattggcaa accagcttgc ggcaaggcgc tgtttttctt tcatctgacg
    13021 ttgcaggcta tcgtcggtga tcagccgtaa cgcctgattc gggcaagcgc gaacgcaggc
    13081 cggaccttct ggcaagaaat cacacaggtc gcatttcacc gcgacggtct ggacacccgg
    13141 ttcccagcgc agcaacgcat gttggggcgg cacgttttct tcgccgtctt tgagtgagcc
    13201 ttcagcctga aaaacatatt gcgcatgggc attcaccgga cggcttcctg aagcgctgat
    13261 tgcgccaaat gggcagacca cggcgcaaag cttgcagcca atacagaggc tttcgttgag
    13321 ttggatcgca tcatccctct gggagatggc attaaccggg cagacctgca ggcaaggggc
    13381 ttcctcacag tgatgacaca cgacaggggc agtgagtgtt gacgtcttcg ccagggccag
    13441 gcgcgggtgt tgctgtaaac cttgcgtttt atgcacgtcc gaacaggcag cgagacaggt
    13501 attacatcct gtacaccaca gtggttcggc caccacaaag cggttcatgt cggctccttg
    13561 aaaatgatat gaaacattgc atttcatatt gcataaagga tgtcagtctg attaagtcaa
    13621 tttattcaat aagttatgta ttaactggat tctgaacggt acaaaaatga tggtcattaa
    13681 cgttcagcaa taaatggatt cgacacccgt gttgcagggg aaagtgagaa tgtgatcttg
    13741 atcacgagaa gtgaggtgtg ctgaccacaa gcgcagccag cacggaatgg agcaaagtaa
    13801 tcaggcgtgt tctttcagcc agttcagcac aacgtcgtgg tgattgctgg ttttgaaatc
    13861 gtcaaagaca tgttcgattt tgccatcagc gtcaatcagg aagctgatgc gatgaatgcc
    13921 atcgtaggtt ttgcccatga aggacttttc accccagacg ccgaattgtt cgcacacttg
    13981 gtggtcctca tcagacagga gcgtaaagtt aagcagctct ttttccgcaa aacgggagag
    14041 tttttcgggt ttatcggtgc tgatacccag cacatcaacg cccgcttttt tcaactcatc
    14101 catgttatcg cgtaagccgc aggcctgtac ggtacagccg ggggtaatgg ctttcgggta
    14161 gaaataaacc agaacacgct gtccctggaa gtcggtcaaa ttaacttgtt ctccgtcttg
    14221 atccggcaag ctaaatttcg gtgcgatatc accggctttc agtggattca ttacttaact
    14281 ccatcctgtt catcatgttg ggaataattg acgacgttaa tactgccttg tgcattgagt
    14341 tctgtacata gggctttgaa cgcttgctca atatttgctg cgtccgcaga tgcggggctg
    14401 tgggcggtta tctgaatatg caactgcgca gcccgttcat tttcagcagg ttgcgtgcgc
    14461 gacaccagct ccgcaatgtt catatgatgc gcgtcgaaaa gtgctgtgaa gcgttcaatt
    14521 aaatgcgggg agtctgccac atcgacctga acccagacag atgctggcat tggcggacgc
    14581 ggacgagccg tcgtgcgctt catcacgatt aaaagatcca gctcggcacc tttcaacggt
    14641 aacgttgatt caatcagagt aatggcattc catgaaccgg aaagcagcat gataaacgtg
    14701 aactcttctc ccagcatcgc caagcgactg tcttcaatat tacagccgca actactgaca
    14761 tgacgggtga tggtgttcac aattccaggg cgatcggcac ccaacgcagt gatcaccaga
    14821 taatgttgcg atgacagtgt caaactggtt attcctttaa ggggtgagtt gttcttaagg
    14881 aaagcataaa aaaaacatgc atacaacaat cagaacggtt ctgtctgctt gcttttaatg
    14941 ccataccaaa cgtaccattg agacacttgt ttgcacagag gatggcccat gttcacggga
    15001 agtattgtcg cgattgttac tccgatggat gaaaaaggta atgtctgtcg ggctagcttg
    15061 aaaaaactga ttgattatca tgtcgccagc ggtacttcgg cgatcgtttc tgttggcacc
    15121 actggcgagt ccgctacctt aaatcatgac gaacatgctg atgtggtgat gatgacgctg
    15181 gagctggctg acgggcgcat tccggtgatt gccgggaccg gtgctaacgc tactgcggaa
    15241 gccattagcc tgacgcagcg cttcaatgac agtggtatcg tcggctgcct gacggtaacc
    15301 ccttactaca atcgtccgtc gcaagaaggt ttgtatcagc atttcaaagc catcgctgaa
    15361 catactgacc tgccgcaaat tctgtataat gtgccgtccc gtactggctg cgatctgctc
    15421 ccggaaacgg tgggccgtct ggcgaaagta aaaaatatta tcggaatcaa agaggcaaca
    15481 gggaacttaa cgcgtgtaaa ccagatcaaa gagctggttt cagatgattt tgttctgctg
    15541 agcggcgatg atgcgagcgc gctggacttc atgcaattag gcggtcatgg ggttatttcc
    15601 gttacggcta acgtcgcagc gcgtgatatg gcccagatgt gcaaactggc agcagaaggg
    15661 cattttgccg aggcacgcgt tattaatcag cgtctgatgc cattacacaa caaactattt
    15721 gtcgaaccca atccaatccc ggtgaaatgg gcatgtaagg aactgggtct tgtggcgacc
    15781 gatacgctgc gcctgccaat gacaccaatc accgacagtg gtcgtgagac ggtcagagcg
    15841 gcgcttaagc atgccggttt gctgtaaagt ttagggagat ttgatggctt actctgttca
    15901 aaagtcgcgc ctggcaaagg ttgcgggtgt ttcgcttgtt ttattactcg ctgcctgtag
    15961 ttctgactca cgctataagc gtcaggtcag tggtgatgaa gcctacctgg aagcggcacc
    16021 gcttgcggag cttcatgccc cggctggaat gattttgccg gtgacctccg gtgattatgc
    16081 aatcccggtg accaacggta gtggtgctgt cggtaaggcg ctggacattc gtccaccagc
    16141 ccagccgctg gcactggttt ctggcgcgcg tacccagttc acgggcgata ccgcttcatt
    16201 gctggtggaa aatggtcgtg gcaatactct gtggccgcag gtggttagcg tgctgcaggc
    16261 gaaaaactac accatcaccc aacgtgatga tgctggtcag acactgacca ccgattgggt
    16321 acaatggaac cgtctggacg aagacgagca gtatcgtggt cgttatcaaa tctctgttaa
    16381 gccgcagggt tatcagcagg cggttacggt taaactgctg aacctggaac aggcgggcaa
    16441 accggttgca gacgcggctt ccatgcagcg ttacagcacg gagatgatga acgttatttc
    16501 cgccggtctg gataaatctg ccactgacgc cgcgaacgct gcgcaaaatc gtgcctccac
    16561 cactatggac gtacaaagtg caactgatga caccggttta ccaatgctgg tcgtacgcgg
    16621 gccgttcaat gtggtttggc aacgtctgcc agcggcgctg gaaaaagtgg gcatgaaagt
    16681 gaccgacagc acccgttcgc agggcaacat ggccgtaact tataagccgc tgtctgacag
    16741 cgactggcag gaactgggcg cgagcgatcc aggcctggca tccggtgact ataaactgca
    16801 ggttggcaat ttagataacc gcagcagcct acagttcatc gatccgaaag gtcatactct
    16861 gactcagagt cagaacgacg cgctggtagc tgtcttccag gctgcgttta gcaagtaaaa
    16921 atacagggct ggaatcatcc ggcccttttt tctgatatga tacgcaaacg tgtgcgtcgg
    16981 caggaaaacg cgattttagc ggtaattcgc acgaaatttg tttgtcggac gtagttcgga
    17041 taaggcgttc acgccgcatc cgacaaaaca tccggcacac cagacagcaa aagattttaa
    17101 aacgttaatt cacacccagg agtgataaag atgcaaaagc aagctgagtt gtatcgtggt
    17161 aaagcgaaaa ccgtatacag cacggaaaac ccggacctgt tggtgctcga attccgcaat
    17221 gatacgtcag caggggatgg cgcgcgcatt gagcagtttg atcgcaaagg tatggtgaac
    17281 aacaagttca actacttcat tatgagcaaa ctggctgaag cgggtatccc gactcaaatg
    17341 gagcgtctgc tctccgatac cgaatgtctg gtgaaaaagc tggatatggt gccggttgag
    17401 tgtgtcgtgc gtaaccgtgc tgctggctct ctggtgaaac gtcttggaat cgaagaaggt
    17461 attgagctga acccgccgct gttcgatctg ttcctgaaaa acgatgccat gcacgatccg
    17521 atggtcaacg aatcttactg cgaaaccttt ggctgggtga gcaaagagaa cctggcgcgt
    17581 atgaaagagc tgacctacaa agcgaacgac gtgctgaaaa aactgttcga tgatgctggt
    17641 ctgattctgg tcgacttcaa gctggagttt ggtctgtaca aaggtgaagt ggtactgggc
    17701 gatgagttct ccccggacgg cagccgcctg tgggacaaag aaacactgga gaaaatggac
    17761 aaagaccgtt tccgccagag cctcggtggc ctgatcgaag cctatgaagc cgtcgcccgc
    17821 cgcctgggtg tacagatgga ctgatttttc tgttcatcat cttgccgtgc agctggcacg
    17881 gcaagacaac cgctctcgga atatatgcat tgaacgctca ttcctccgcc atttcatccc
    17941 gctttcctgt ggtaatcttc ctctgaacca cctacgatca tttctataat gaatatattg
    18001 ttgaggtatc tatgcgttgg caagggcgac gtgaaagtga caatgttgaa gacaggcgca
    18061 acagctctgg cggtccgtca atgggcggtc ccggtttccg tctgccgagc ggtaaaggcg
    18121 ggctgatttt actgatagtc gtgctggttg caggctacta tggcgttgat ttaaccgggt
    18181 tgatgaccgg gcagccggtt tctcaacaac aatcaacgcg gtcaattagc cctaatgaag
    18241 acgaagccgc aaaattcacc tcggtgattc tggcaaccac ggaagacacc tggggacaac
    18301 agttcgaaaa gatgggtaag acctatcagc aaccgaagct ggtcatgtac cgtggaatga
    18361 cgcgcaccgg ctgcggggcg ggccagtcca ttatggggcc gttctattgc ccggcggatg
    18421 gcacagttta tatcgatctc tccttctatg atgacatgaa agacaaactt ggcgcggatg
    18481 gcgattttgc ccaggggtac gttatcgccc atgaagtcgg tcatcatgtg cagaaactgt
    18541 taggcatcga gccgaaagtt cgtcaactgc aacaaaacgc gacgcaggcg gaagtaaacc
    18601 gcttatctgt gcgtatggaa ctccaggccg actgttttgc cggtgtctgg gggcatagta
    18661 tgcagcagca aggcgttctg gaaactggcg atctggaaga ggcgctgaat gcggcgcagg
    18721 ccatcggcga tgaccgttta caacagcaaa gtcaggggcg agtagtacca gacagtttca
    18781 cacatggcac ttctcagcaa cgctacagct ggtttaaacg tggtttcgac agcggcgatc
    18841 cggcacaatg caatactttt ggtaaaagca tttaatttcc ggggcaggga tggctgaact
    18901 gactgcgctt tacacattaa cagcgcaaat gaaacgtgaa gggatccgcc gcttgctggt
    18961 gttgagcggg gaagagggtt ggtgttttga tcatgcgctt aagttgcgtg atgccttacc
    19021 tggcgactgg ctgtggattt cgccgcagcc agatgctgaa aaccactgtt caccctcggc
    19081 gctacaaact ttacttgggc gcgagttccg gcatgcggta ttcgacgccc gccacggctt
    19141 tgatgccgct gcctttgccg cacttagcgg aacgttgaaa gcgggaagct ggctggtttt
    19201 gttactccct gtatgggaag agtgggaaaa ccaacctgat gccgactcgc tgcgctggag
    19261 tgattgccct gaccctattg cgacgccgca ttttgtccag catctcaaac gcgtacttac
    19321 ggcggataac gacgctattc tctggcggca aaaccagccg ttctcgttgg cgcattttac
    19381 tccccgtact gactggcacc ccgcgaccgg cgcaccacaa ccagaacaac agcaactctt
    19441 acagcagtta ctgaccatgc cgccgggcgt ggcagcggta acggctgcgc gtgggcgcgg
    19501 taaatcggcg ttggcagggc aactcatttc tcgtattgcg ggcagtgcga ttgtcaccgc
    19561 gcccgcaaaa gcggcaacgg atgtactggc acaatttgcg ggcgagaagt ttcgctttat
    19621 tgcaccggat gccttgttag ccagcgatga gcaagccgac tggctggtgg tcgacgaagc
    19681 cgcagccata cctgcgccgt tgttgcatca actggtatcg cgttttcctc gaacgttgtt
    19741 aaccactacg gtgcagggct acgaaggcac cggacgtggt tttttgctga aattttgcgc
    19801 tcgctttccg catttacacc gttttgaact gcaacaaccg atccgctggg cacagggatg
    19861 cccgcttgaa aaaatggtta gtgaggcact ggtttttgac gatgaaaact tcacccatac
    19921 actacaaggc aatatcgtca tttccgcatt tgaacaaacg ttatggcgaa gcgagccaga
    19981 aacgccgtta aaggtttatc agttattgtc tggtgcgcac taccggacct cgccgctgga
    20041 tttacgccgg atgatggatg caccagggca acatttttta caggcggctg gcgaaaacga
    20101 gattgccggg gcgttgtggc tggtggatga gggcggatta tctcaagaac tcagtcaggc
    20161 ggtatgggca ggttttcgtc gcccgcgggg taatctggtg gcccagtcgt tggcggtgca
    20221 cggcagcaat ccactggcgg cgacattgcg cggaaggcgg gttagccgga tagcagttca
    20281 tccggctcgt cagcgggaag gcacagggcg gcaacttatt gctggagctt tgcaatatac
    20341 gcatgacctc gactatcttt cagtgagttt tggttacacc ggggagttat ggcgtttctg
    20401 gcaacgctgc ggttttgtgc tggtgcggat gggtaatcat cgggaagcca gcagcggttg
    20461 ctatacggcg atggcgctgt taccgatgag tgatgcgggt aaacagttgg ctgaacgtga
    20521 gcattaccgt ttacgtcgcg atgcgcaagc tctcgcgcag tggaatggcg aaacgcttcc
    20581 tgttgatcca ctaaacgatg ccatcctttc tgacgacgac tggcttgaac tggccggttt
    20641 tgctttcgct catcgtccgc tattaacatc gttaggttgc ttattgcgtc tgctacaaac
    20701 cagtgaactg gcattaccgg cgctgcgtgg gcgtttacag aaaaacgcca gtgacgcgca
    20761 gttatgtacc acacttaaac tttcaggccg caagatgtta ctggttcgcc agcgggaaga
    20821 ggccgcgcag gcgctgttcg cacttaataa tgttcgcact gagcgtctgc gcgatcgcat
    20881 aacgcaatgg caattttttc actgactcct tcaattttct cccatggtca ttgtgagtca
    20941 gcggcgtaaa attaatgaca tcagttaagg agttcgccat gaaacatgac cattttgttg
    21001 ttcaaagccc ggataaacct gcgcaacatt ttccacggtg tcggggataa cccggtggca
    21061 atgggggaaa taggtagctg gtttgcaccg ttgttcccgg atgcgctggt ggtgagtgtc
    21121 ggtggcgcgg agccgagcgg taatccggcg gggcgtcagt ggttttcggt gcagggtatt
    21181 acggaagata atcgccaggc gcgtgtggat gccatcatgc cgacgtttat tgaaacggtg
    21241 cgctactggc agaaacagag cggagtaggg gctaacgcca cggcgctaat cggtttctct
    21301 caaggcgcga ttatggcgct ggagagcatt aaagccgaac cgggccttgc ttcacgcgtc
    21361 attgctttta acggacgcta tgcgagcctg ccggaaaccg cgtctacagc cacgacaatt
    21421 cacttgattc atggtggtga agatccggtt atcgatctgg cgcatgcagt tgcggcgcag
    21481 gaagcgttaa tcagtgccgg tggtgacgtg acgctggata tcgtggagga tttaggccat
    21541 gcgatcgaca atcgcagtat gcaatttgcc ctggatcact tgcgttatac cattccgaaa
    21601 cattatttcg acgaagcgct aagtggcggt aagcctggcg atgatgatgt gattgaaatg
    21661 atgtaaaaga cagattacct ggcctgataa gacgcgtgag cgtcgcatca ggcattgttc
    21721 accattgccg gatgcggcgt taacgcctta tccggcctac ggttgagcac tcagcttact
    21781 tcttcggttg atcctttttc ggccagtcgt cgtcatcgtc ccacttatcg ttgaaatcac
    21841 gatgcggggg aagctccggc ttgttggcga gaaatttctt atggtcgacg cgcttgagat
    21901 ctttaatcac gttcagcagg acgcctacca aaaagacaat caccagaatc caccaatatt
    21961 tagccagcca gtccatgctt atttcctctt gcagaaccac tcatcacgcg acgagctgtt
    22021 ccatgatacg ttgatacata cgtgcaagta gctgcaggtc ggcagcgttc acacattcat
    22081 taattttatg aatagtggca ttgaccggcc cgagttccac cacctgcgcc cccatgcgag
    22141 caataaagcg cccgtcggac gttccgcctg tggtcagtag ctgcggttta atttcattat
    22201 agtgctcaac cgcgttaacg accgcatcca ccagtttacc gcgcgcggtc aaaaatggct
    22261 gcccggaaag ccaccaatcc accgtatagc gcagttgatg tttttcaagc agggcaagta
    22321 cctgcgcttt gatcatctca tcagtcagtt cggtgctgaa gcggaagtta aactgcacaa
    22381 acagttcacc cggaataaca ttgttactgc ccgttcccgc ctgaatattg gcaatctgca
    22441 tactggtcgc cgggaagaat tcattgccct gatcccactc aatagccact aattcattaa
    22501 ggaaaggtgc tgcgcgatgt accggattgt cagccagatg tgggtaggca acatgcccct
    22561 gaacgccatg aatggtgagg ttgcaggtta acgatccgcg acgaccattt ttcaccacat
    22621 cacctaccac ttcgatactc gacggttcgc cgaccaggca gtaatcgaga cgctcattac
    22681 gtgccattaa cgcctcgacg acttttaccg taccgttgtg ggcactggct tcttcatcag
    22741 aagtgatcag aaatgccagt cgccccgtat ggttgggatg ttgtgcgaca aaacgttctg
    22801 ctgctaccac catcgccgcc agcgagcctt tcatatctgc cgcaccgcgc ccgaataaca
    22861 tgccgtcacg aatggtgggt tcaaacggcg gattgatcca acgatcggcg tcgccaggcg
    22921 gcaccacgtc ggtatgcccg gcaaaggcta acgtttcacc ttgcccacgc catgcccaaa
    22981 aattctgcgt atcggcaaaa tccatgcgtt caacggtaaa accgaacgcc tgcaaacgtt
    23041 caatcaacaa agcctggcat cctgcgtcat caggactcag ggaagggcgg cgaataagct
    23101 gttgtgtcag ctcaataacc gggcacgaca tagactacac ctcatggaaa aattgctgat
    23161 aactggaatc actgaaaccc agcagcatag gcttaccagg cgcgcagagc aatggacgtt
    23221 tgataattgc aggcatttca gtcattaatg ccgccgcaga ggccgcatcg gtgattttat
    23281 tgcgggtggt ttcgtccagt ttacgccagg ttgtaccacg ggtgttgagt aacgcttccc
    23341 agcctaattc gttgataaaa ccgttcaata attcgctgtc cagcccatcg acgcggtaat
    23401 catgaaaacg atagtcgatg ttattggctt ccagccaacg gcgagccttt ttaatggtgt
    23461 cacaattttt gatgccgtaa agtgtaacca taatgaatcc tttttcgatt tatgagaata
    23521 aatactcatt taagggtgaa aacattttgc ctgcaaatga ttatcaggaa atataacatt
    23581 atcgaagtat tcaaattaac aactattaaa taatattaaa catttttaac gtaaacatta
    23641 agaatattca tcttgttatc tgtctgtatt ttaaccagaa ttaaatcagt attagatgcc
    23701 gtatgaatat ctcgaaatgt tgctgtgtat cacatacaaa ttatcaccgc aggaccatag
    23761 tatttacata aggtttgtcc cccggaggta gtcatcgcag caatcgagta aattagcttc
    23821 accacggtat attgtttccg tagaataccc ataattataa gagaggttgt tatgattgaa
    23881 cgtgaactgg ggaactggaa agactttatc gaagttatgc ttcgtaagta attcctgaga
    23941 caaagtataa acagcaagaa cccgctgagc aggttcttaa tcggaaagtt gaaaaaggcg
    24001 acacattggc atgtcgcctt ttttattgct tattccgggc gcggctttag cgggaagcgg
    24061 cggcgcacca gcacaaagaa cagcggcacg aagtaaatag ccagaatagt ggctgaaatc
    24121 atcccgccca ttacgccagt acccaccgca tgctgaccac cggaaccggc acccgtgctg
    24181 gttgccattg gcaatacgcc gaagataaat gccagcgagg tcatcagaat cgggcgtaaa
    24241 cgctgacggc aggcgtggag cgtcgcttca aacaggtcgt ggcctttttg gttcatctcg
    24301 ttagcaaact cgacgatcag gatggcgttt ttcgccgata aaccaatgac cgttaacagg
    24361 cccacctgga agtaaacgtc gttttccagc ctgcgcatcc aggttgccag cagcgcgccg
    24421 ataaccccca gcggcacgac cagcattacc gagaacggca ccgaccagct ttcatacaat
    24481 gccgccagac acaggaatac caccagcaag gaaatggcgt acagcgccgg agcctgcgcg
    24541 ccggaaagcc gctcctgata cgacatcgcc gtccactcca gaccaaagcc gtttggcaac
    24601 tgcttcacta acgattccat aatatccatc gccgtaccgg tactgacccc cggtgcggct
    24661 tccccaacaa tctcaaccgc agaataaccg ttatagcgtt ccagacgcgg cgagcctgtc
    24721 tcccagcgtg aggtcgcgaa agcagagaag ggcaccatgc cgccatcttt atttcggaca
    24781 taccagagat tgatgtcatt tggcagcatg cgatacggcg cagctgcctg cacatagact
    24841 ttcttcacgc gaccgcgatc cataaagtca ttcacatagc tcgaacccca ggcggtttgc
    24901 agtgtgtcgt taatatcgtc gatagcaacg cccagcgcct gagctttacg ctggtcgata
    24961 tcaatctgca actgcggact gtcgtcgagg ccgttatggc gcacacgggt tagctccggg
    25021 ttttccgccg ccagcgccag taactggtta cgtgctgtca tcagcgcatc gtgacctgct
    25081 ccagcgtggt cctgcaactc catatcaaaa cccgcagaac taccaagacc gctaattgct
    25141 ggcgggctgc tggcgataac gcgagcttct ttaatcttgt taaacgcctt cgttgcacgt
    25201 tcgataatgg caaatgaggt gccggtctta ctgtcgcgtt cgctccagtc tttcaggcgg
    25261 ataaacattc gcgccacgtt ttgcccgttg cccccagggc cagagccaat ggtggcaaac
    25321 accgacatga tgttgtcttt ttcatgggtg aagtaatatt tctcgatttg ctcaacgact
    25381 ttcagggtct gttgttgggt tgaaccgctg ggcaattgta ccgaggtagt aaacatgccc
    25441 cggtcttcca gcggtaagaa cgacgtcggc aaacgcagga acaggaacac catgccgcca
    25501 agcagcagga cataaatcac aatccagcgc aggctacggt ggagaatttt cgccacccct
    25561 ttttcgtagc gttcggcgtt gcggttaaac atctggttaa accaggcaaa aaagcctttt
    25621 tgcccgtgat gctcaccttt tttcagtggc ttaagtagtg tggcacacag agccggagtg
    25681 aggatcatcg ataccagtac tgacagcacc atcgccgcaa caatggtaat agagaactgg
    25741 cgatagatgg caccggtggt gccgccgaag aaggccattg gtacaaatac cgccgaaaga
    25801 accatcgcaa tcccgaccag tgccccctgg atctgcccca tcgatttacg tgtggcttcg
    25861 cgaggagtga gtccttcctc actcataata cgttcgacgt tttccaccac cacgatggcg
    25921 tcatccacca gcagaccgat cgccagcacc atcgcgaaca tggttaaggt gttgacgctg
    25981 taaccgaagg cgtaaagtac ggagaaggtt cccatcaaca ccaccggcac ggcgatagtg
    26041 ggtatcagcg tggcgcggaa gttttgcagg aacagataca taacgaggaa aaccagagcg
    26101 atagcttcca gcagcgtttt caccacgtct tcaatggagg ctttaacaaa cgaggtggtt
    26161 tcatacgcca ccttgtattc cagtccgtgc gggaaatact gcgccagctc gtcgagacga
    26221 ttgagcacca gctccgctgt cgccatttcg tttgcgccgg aggccagttt tacccccaac
    26281 ccggaggctg gcttaccatt gaagcggcta agataatcgt atttctccgc ccccatttcg
    26341 acggtggcga catcgcccag ccttacctct gagccgtcct gattcacccg caaggtgata
    26401 tcgcggaact gttctggtgt ttgcagcagt gactgggcgt taatggtggc gttgagcgcc
    26461 tgcttatcga cggaaggtgt accaccaagt tgcccaaccg caatctgcgc gttctgtgac
    26521 tcaatggcat cagtgacatc tttagccgtc atctggaaac tgttgagttt cgccgggtcc
    26581 agccagatac gcatggaata ttgcgaacca taggcatcga tatccccgac gccattcacg
    26641 cggcttaacg ggtcctgaat attactggca acataatcag caatatcctg tttatccatc
    26701 gagccatcgg tagagacgaa ggcaatggtc agaatgttgg tatcgccggt tttacgcacc
    26761 gtcacgccct gattttgcac cgcctgcggt aactttcgca tggctgattg cagctggttt
    26821 tgtacttgct gcacggcttc gtccggatcg gtgcctgctt taaaacttaa agtgacagat
    26881 gcctgaccgg tgccactgct ctgagatgac atatacatca gattatcgag gccggtcata
    26941 ttttgctcga taacctgggg cacggtgttt tccagcgtct gggccgatgc gccgggatag
    27001 ttagcggtca ctcgcacatt cggtggcgcg agatcggggt attgttcaac gggcaatgaa
    27061 aaaatcgcca gggtacctgt cagacacaac aggattgcca gcacccaggc aaaaatgggg
    27121 cgatcaataa agaaattcgc cattaaaaga ggacctcgtg tttctgcgta ttgttgtagg
    27181 cttgacttgc ttcactgtag cggcaaggta cgagccaatc gtggagaaaa aaaggagtta
    27241 atgtaaatta tcatgagatt gctgacacac tcgcttacag gtcaatatgg gcacgttttt
    27301 ccctctcgcc tttaaaggga gagggccggt gtgagggtaa ttatttacac ctcagccggc
    27361 gtgttcccct ccccctcacc ctctgcggag cgaaagctaa tactcactaa cgtgccgccg
    27421 ccggaaggtt gtgaaaaagt cagcgtcccg cccagccgtt ccgcgcgttc gcgcatgata
    27481 ttcagtccat aatgaccttc gggttctttc ggttcaccga taccaatccc gttatcacgg
    27541 atataaaccg tgtgattgcc gtccggcgcg gtgacgcaac tgacggcgat ttcgctggcg
    27601 ttggcgtgct tcatcgcatt cagcaccgct tcgcgaataa tttgcaacaa atgcacctgc
    27661 atttgcgcat ccagcgccag ggttggcaga cggcagtcga gggtcagttt ggcgctggtt
    27721 tgattttgta acgtatccag catttccctc aacgcggagg ggagatccgc ctgctgcagc
    27781 gtcaggcgga aagtagtcaa cagctcgcgt aactgccgat aagcatcatt caacgcctgg
    27841 gaaaaatcgg ccatgatact ttgtgcggtg gcgttatctt ccggtatcga acgcttcagt
    27901 aacgtcaact ggatacgtaa gtaagaaagt acctgagcca gcgagtcgtg caattcgcgg
    27961 gcgatggtcg cacgttcttc catcaacaat aactgctgaa aatgcttctg cgcctgatta
    28021 aagtacaaac cgcgtcccag catcgatgaa acactgttaa gcagcggttc tgatgatgaa
    28081 acgtgactat tttgccagtg cagttcgccg taaaccgtct cttgcattgt caccggtaaa
    28141 atctgcattg gcagctcagg ggttggcttc ccttcgctaa tccgccagtt atccccaacg
    28201 ttcagctcca gatattcagc cgcttcattg tcgcgaacaa tctgcaaaat atggcggaaa
    28261 caatgcacat caatctggct ggtgttcagc gcctgggaac actgatacaa cacctccaga
    28321 cgacgcttgg cctcgtggag atcgcgggtc ttttcttcta ctgacgcctc cagcgaaagg
    28381 tacaatttat gcagctcgct cgacatttgg ttaaaggttt ttgcaagcag accaagctca
    28441 ttcggcagac tggaatccag cggcggcgag tcgaactgcc cgtgttcaat acgctgactg
    28501 gcggtaacca gctgattcag cggggcaacc acctgatggc gtatgcggcg caaagtaaaa
    28561 aagaccagcg tgaaaatacc gataccgcca gctagggaaa tcgccaccac cagcagcatt
    28621 ttgcgttcag cgtagtgctg taaagccagc acgaacaggt ctatctgatt aacataatta
    28681 ttaatattgg cctgatacca cggcaaatcg cccttgctga gccgattatt catctccagc
    28741 cagttggcat tcagatgcgc atagcgagtt tttactgctt ctggcacata ccagacgttg
    28801 aggttggtta ataccggtga atgcagtgcc tgctgaaaca actggcgatg tgcattgagt
    28861 tgtggactgc cactttgcaa gtcgtagccc aggcggtaac tctgcatacg cagcgatccg
    28921 gcaatattga tagcctcagc gtcgcgcaaa ctgctcgcca gagttagcag agcgataccc
    28981 gtggaaagaa tcgacagcag cacaatgtaa aaaaaggccc gggccagact ggccgagacg
    29041 ggtcgtttaa caatcacacg cgtcttctcc acaaaaaatc attaatgttc cagttcgctg
    29101 aaacgcaatt tagtcagtga tgggattatt tgatctgcca cagtttatag cgaaatagtt
    29161 acttattctg ggcacatgaa cattgccgat tcccctgtaa gtcgggtaat aacaacactc
    29221 atataaagaa taaggttttt acaaccaaaa aagaaggtcg ttatgaatcg ttttattatg
    29281 gccaacagtc agcaatgtct ggttgtcatg cttgtgaaat cgcctgtgtc atggctcaca
    29341 atgatgagca acatgtcctg agccaacacc attttcatcc ccgaattacg gttatcaaac
    29401 atcagcagca acgtagtgca gtgacctgtc accattgtga agatgcgccc tgcgcccgta
    29461 gctgccctaa tggcgcaatc agccacgttg atgacagcat tcaggtcaat cagcaaaagt
    29521 gtattggctg taaatcctgc gtggtggcct gtccgtttgg tacgatgcaa atcgtcctga
    29581 cacccgtcgc ggcaggaaaa gtaaaagcca cggcgcataa atgcgacctt tgtgcagggc
    29641 gcgaaaacgg tcctgcctgt gtcgagaatt gcccggcgga cgcgctgcaa ctggtcactg
    29701 acgtcgcact ctccggcatg gcgaaatccc gccgcttgcg caccgcgcgt caggaacatc
    29761 aaccatggca tgccagtacc gcggcacaag aaatgccggt aatgagtaaa gtcgagcaaa
    29821 tgcaggcaac gcccgcgcgt ggcgagccgg ataaactggc gattgaagcg cgcaaaaccg
    29881 gttttgatga aatttatctg ccatttcgcg ccgaccaggc acaacgggaa gcctcgcgct
    29941 gccttaagtg cggcgagcac agcgtttgtg aatggacctg cccgctgcat aaccatattc
    30001 cgcagtggat tgaactggtg aaagccggaa acatcgacgc cgccgtcgag ctttctcacc
    30061 agaccaaccc cctgccggaa attaccggac gcgtttgtcc gcaagaccgt ttgtgtgaag
    30121 gtgcctgtac tattcgcgat gagcacggcg cggtaactat cggcaacatt gaacgctata
    30181 tttcagatca ggcgttggcg aaaggttggc gtcctgactt aagtcatgtc accaaagtgg
    30241 acaagcgggt ggcgattatc ggggcaggtc cggcagggct ggcctgtgcg gatgttctga
    30301 cccgcaatgg cgtggcggtg acggtgtacg atcgccatcc agaaatcggt ggcttgctca
    30361 ctttcggcat tccttctttc aaactggata aatccctgct ggcacgccgt cgggaaatct
    30421 tcagcgcgat ggggattcac ttcgaactca attgtgaagt gggtaaagat gtctctttgg
    30481 attcgctttt ggaacaatac gacgcggtct tcgttggcgt aggcacttac cgttccatga
    30541 aagcgggttt acccaatgaa gatgcgccgg gcgtttatga cgcgctgccg ttcctcattg
    30601 ccaacactaa acaggtgatg gggctcgaag agctaccgga agagccgttt atcaataccg
    30661 ccggacttaa cgtcgtggta ctgggcggcg gcgacaccgc gatggactgt gtgcgtactg
    30721 cgctgcgcca cggcgcgagt aacgtcacct gcgcttatcg tcgtgatgaa gctaacatgc
    30781 caggctcgaa gaaagaggtg aagaacgccc gcgaagaggg ggccaacttc gaatttaacg
    30841 tccagccggt ggcgcttgag ctgaatgagc aaggtcacgt ttgcggaatt cgtttcctgc
    30901 gcacgcgtct tggcgagccg gatgcccagg ggcgtcggcg acctgtaccg attgagggca
    30961 gtgaatttgt catgccagcc gatgcggtga ttatggcgtt tggcttcaat ccacacggga
    31021 tgccgtggct ggagtcgcac ggtgtaacgg tagacaaatg gggccgcatc atcgcggatg
    31081 tggaaagcca gtaccgttac cagaccacca atccgaaaat cttcgccggt ggcgacgccg
    31141 ttggcgttaa gtggtgacaa gtggcggatt tcaccatggt tactagtaac cgatgatacg
    31201 gcaaccatca ccgcgttttt gcagatgatt caggaaggga aggcgatcac cttacgcgac
    31261 ggcaatcaga ccatttctct gagtggctta aaagcggcgt tgttgtttat tgatgctcag
    31321 caaaagcgcg ttggcagtga aaccgcgtgg ataaagaaag gggacgaacc gccgctcagc
    31381 gtaccgcccg cgcctgcgct gaaagaggtc gcggtggtta acccaacgcc gacgccactc
    31441 tcactcgaag aacgcaacga tttgctggat tatggaaact ggcggatgaa tggtctgcgc
    31501 tgctcgcttg atccattgcg tcgtgaggtg aatgtcactg cgctgaccga tgataaagcg
    31561 ctgatgatga ttagctgtga ggcaggggcc tataacacca ttgatttggc atggattgtg
    31621 tcgcgtaaaa agccgctggc ctcgcgcccg gttcggttgc gtttgccgtt caacaacggt
    31681 caggagacga atgaactgga actgatgaac gcaacatttg atgagaaatc gcgtgagctg
    31741 gtgaccttag cgaaagggcg cggattaagc gatcgtggca ttcaggcgcg ctggcgcttt
    31801 gacggtcagc gttttcgcct ggtgcgttac gccgtagaac ccacctgcga taactggcat
    31861 gggccagacg cctggcccac gttgtggatc acccgttaaa caaaatggcg gggacatgta
    31921 ggccggataa gacgcgtcag cgtcgcatcc ggcaatcagc atcaggcgat caccatcagg
    31981 cacctttcac tcccagcacc ttatgcgctt ttgccacaat attctcggcg gtaaagccaa
    32041 agaacgggaa cagcttatcc gccggagcag attccccgta acccgtcatc ccgacaattg
    32101 cccctttcag accaacatac ttgtaccagt aatcggcaat acctgcttcc accgccacgc
    32161 gagccgcaac gttagaaggc aacaccgact cccgatattc ctcatcctgg gcgtcgaaaa
    32221 tatcggtcga gggcagggaa actacgcgta cattgcgacc ttctcccgct aatttctctg
    32281 ccgcttgcag ggtgatttcc atctctgaac cggtggcaat caaaataata tctggcttac
    32341 cgccgctgtc tttcagcaca taaccgccac gagcaatctc tttaacctga tccggcgtac
    32401 gttccacctg ggccagattc tgcctggaga gaatcagtgc cgtcggtccg ttgtggcgct
    32461 caaccgccag cttccagccc accgccgctt ccacctgatc gcacggtcgc caggtgctga
    32521 aatttggcgt taagcgcagg ctggccagtt gctcaacagc ctggtgcgtc ggaccatctt
    32581 cgcccagacc aattgagtcg tgggtataaa ccataatctg ccgcgctttc atcagtgccg
    32641 ccatccgagc ggcgttacgg gcgtattcaa caaacatcag gaacgtcgcg gtatacggca
    32701 caaagccgcc gtggtgcgca atgccgttgg cgatagcggt catgccaaat ttacgcaccc
    32761 cgtagtgaat gtagttgccc gccggatctt ccttcagcga cacagagcct ttccagatgg
    32821 tcaggttgct gggagccaga tccgccgaac cgccgagcag ctccggtagc atcggcccgt
    32881 aagcgttaag cgtattttgc gaagccttac gggtagcgat tttcgccgga tttgcctgta
    32941 actcattgat atatttctga gtcgttttct cccagtcctt cggtaaacca ccgctcatcc
    33001 gtcgggcaaa ctcttctgcc agttgcggat gagccttttt ataggcggca aacttctcat
    33061 tccagctctg ctgcgctttt tcgcgggcat cccaggcgtg ataaatctct ttagggattt
    33121 caaatggcgg atggtgccag cccagttttt gccgtgccag cgccacttct tcttccccca
    33181 gtggtgcgcc gtgcgcctct tccttacctg ctttattcgg cgaaccaaag ccaatcaccg
    33241 tacggcagat aatcagcgac ggcttatctt tcacgctttg cgcttcaagg atcgcttcct
    33301 tcaccgcctg cggatcgtgg ccgtcgatct cgtggatcac atgccagtga taggcttcaa
    33361 aacgttttgc cgtatcgtcg gtaaaccagc cttcggtttc actgtcgatg gaaataccgt
    33421 tgtgatcgta aaaaccaatc agtttgccca gccccagcgt gcccgccagc gaacaaactt
    33481 catgggagat accttccatc aggcagccgt cgcccataaa cacataggtg aagtgatcga
    33541 cgatctcatg gtctggctgg ttaaactgcg ccgccaatgt acgttccgct atcgccagcc
    33601 cgacggcgtt cgccaaacct tgtccaagag gaccggtggt ggtttcaaca cctggcgtat
    33661 agccaatctc cgggtgacct ggggtttttg aatgcaactg acggaagttc ttcagctctt
    33721 ccagcggcag gtcgtaaccg gtcagatgta gcaaactgta gagcagcatc gacgcgtgac
    33781 cgttggaaag aataaagcgg tcgcgatcat accaggttgg gtcggtaggg ttatgtttaa
    33841 gaaaatcgtt ccacagcact tcggcaatat cagccatgcc catcggcgcg ccgggatgac
    33901 cagaattggc tttttgtacc gcatccatac tgagtgcgcg aatcgcattg gcaaggtctt
    33961 ttcgggacat ataacactcc gtggctggtt tatagtttgg cggcaagaag atcttccagt
    34021 ttgcgttgat caacagcgaa cagacgaatg ccttcagaca gtttttctac cgccatcgca
    34081 tcctgattgt gctcccaacg gaactccgct tcgctcatgg gtgctgggcg tgggaacgtc
    34141 tgagaaggcg ggattaattt acgtaccact ggcgaaactt tttcctgcag ctccttcagc
    34201 aaattcggtg cgatagtcag tcgatcgcag ccggttaagg cgaggatttg ttcggtgcga
    34261 cggaagctcg cgcccatcac aatggtttca tagtggtgtt gcttatagta gtcgtagata
    34321 ttgcgcaccg atttaacgcc cggatcttct tccaccacat acgggtccat cggcttgcgt
    34381 gcctgatacc agtcataaat acgccctaca aacggcgaaa tcagaaaaac gcctgcttcc
    34441 gcacaggccc gcgcctgggc aaaagaaaac agcagcgtca ggt
//
LOCUS       DAJVTL010000030        34045 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.030, whole genome shotgun sequence.
ACCESSION   DAJVTL010000030 DAJVTL010000000
VERSION     DAJVTL010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34045
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.030"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            6..81
                     /locus_tag="OQQ26_001410"
     tRNA            6..81
                     /locus_tag="OQQ26_001410"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Thr,seq:ggt)
     gene            121..236
                     /gene="rrf"
                     /locus_tag="OQQ26_001411"
     rRNA            121..236
                     /gene="rrf"
                     /locus_tag="OQQ26_001411"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(299..1057)
                     /locus_tag="OQQ26_001412"
     CDS             complement(299..1057)
                     /locus_tag="OQQ26_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HCS1856910.1"
                     /translation="MSQILLQPANAMITLENVNKWYGQFHVLKNINLTVQLGERIVLC
                     GPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPH
                     LTVLQNCTLAPIWVRKMPKKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIAR
                     SLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVI
                     FMDRREIVEQAAPDEFFAHPKSERTRAFLSQVIH"
     gene            complement(1065..2168)
                     /locus_tag="OQQ26_001413"
     CDS             complement(1065..2168)
                     /locus_tag="OQQ26_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HCS1856911.1"
                     /translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
                     MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIYERFGQFMYGLYPHDQRWRINL
                     ALLIGLVSIAPMFWKILPHRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
                     LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
                     PLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
                     GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG
                     YVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH"
     gene            complement(2178..3359)
                     /locus_tag="OQQ26_001414"
     CDS             complement(2178..3359)
                     /locus_tag="OQQ26_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HCS1856912.1"
                     /translation="MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTV
                     TNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFA
                     SVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSA
                     FDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWP
                     IAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFI
                     AEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSS
                     LAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVE
                     R"
     gene            complement(3427..4452)
                     /locus_tag="OQQ26_001415"
     CDS             complement(3427..4452)
                     /locus_tag="OQQ26_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1856913.1"
                     /translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
                     LPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLS
                     RNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELN
                     VADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVL
                     PEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAH
                     LLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGI
                     QYAPPVR"
     gene            complement(4883..5104)
                     /locus_tag="OQQ26_001416"
     CDS             complement(4883..5104)
                     /locus_tag="OQQ26_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856914.1"
                     /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIALSK"
     gene            complement(5357..8454)
                     /gene="acrF"
                     /locus_tag="OQQ26_001417"
                     /pseudo
     CDS             complement(5357..8454)
                     /gene="acrF"
                     /locus_tag="OQQ26_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417732.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit AcrF"
     gene            complement(8466..9602)
                     /gene="acrE"
                     /locus_tag="OQQ26_001418"
     CDS             complement(8466..9602)
                     /gene="acrE"
                     /locus_tag="OQQ26_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrE"
                     /protein_id="HCS1856915.1"
                     /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV
                     KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA
                     NYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQADAAVIAAKATVESAR
                     INLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRL
                     KQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQ
                     HTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEARPVVASQA
                     IGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK"
     gene            10001..10663
                     /gene="acrS"
                     /locus_tag="OQQ26_001419"
     CDS             10001..10663
                     /gene="acrS"
                     /locus_tag="OQQ26_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrS"
                     /protein_id="HCS1856916.1"
                     /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT
                     RGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAK
                     IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD
                     VVMIIIDGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELS
                     VM"
     gene            complement(10666..10845)
                     /locus_tag="OQQ26_001420"
     CDS             complement(10666..10845)
                     /locus_tag="OQQ26_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 family protein"
                     /protein_id="HCS1856917.1"
                     /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNP
                     LKLVNCDELNFQDRM"
     gene            complement(10929..11813)
                     /gene="yhdJ"
                     /locus_tag="OQQ26_001421"
                     /pseudo
     CDS             complement(10929..11813)
                     /gene="yhdJ"
                     /locus_tag="OQQ26_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417728.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
     gene            complement(11899..12195)
                     /gene="fis"
                     /locus_tag="OQQ26_001422"
     CDS             complement(11899..12195)
                     /gene="fis"
                     /locus_tag="OQQ26_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HCS1856918.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            complement(12221..13186)
                     /gene="dusB"
                     /locus_tag="OQQ26_001423"
     CDS             complement(12221..13186)
                     /gene="dusB"
                     /locus_tag="OQQ26_001423"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HCS1856919.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY
                     RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            complement(13515..14396)
                     /gene="prmA"
                     /locus_tag="OQQ26_001424"
     CDS             complement(13515..14396)
                     /gene="prmA"
                     /locus_tag="OQQ26_001424"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HCS1856920.1"
                     /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYVDSFAL
                     DPVVEKEEWCRITGRKN"
     gene            complement(14408..15859)
                     /gene="panF"
                     /locus_tag="OQQ26_001425"
     CDS             complement(14408..15859)
                     /gene="panF"
                     /locus_tag="OQQ26_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HCS1856921.1"
                     /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVDTLQ
                     TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMLVGGVLYAVLATLNIQYLGFH
                     PIVPSLLLSFLAFLVGNRFGTSVPQATVLTTDK"
     gene            complement(15849..16091)
                     /locus_tag="OQQ26_001426"
     CDS             complement(15849..16091)
                     /locus_tag="OQQ26_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HCS1856922.1"
                     /translation="MDTRFVQAHKEAHWALGLTLLYLAVWLVAAYLPGVAPGFTGFPR
                     WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
     gene            complement(16200..17549)
                     /gene="accC"
                     /locus_tag="OQQ26_001427"
     CDS             complement(16200..17549)
                     /gene="accC"
                     /locus_tag="OQQ26_001427"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HCS1856923.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
                     SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
     gene            complement(17560..18030)
                     /gene="accB"
                     /locus_tag="OQQ26_001428"
                     /gene_synonym="fabE"
     CDS             complement(17560..18030)
                     /gene="accB"
                     /locus_tag="OQQ26_001428"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HCS1856924.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
                     QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
     gene            complement(19008..19982)
                     /locus_tag="OQQ26_001429"
     CDS             complement(19008..19982)
                     /locus_tag="OQQ26_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCS1856925.1"
                     /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDA
                     LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
                     RVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
                     STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDT
                     VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
                     QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
     gene            20134..22074
                     /gene="csrD"
                     /locus_tag="OQQ26_001430"
                     /pseudo
     CDS             20134..22074
                     /gene="csrD"
                     /locus_tag="OQQ26_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312151.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
     gene            22379..23422
                     /gene="mreB"
                     /locus_tag="OQQ26_001431"
     CDS             22379..23422
                     /gene="mreB"
                     /locus_tag="OQQ26_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HCS1856926.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNS
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
                     SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
                     KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
                     QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
                     MIDMHGGDLFSEE"
     gene            23488..24573
                     /gene="mreC"
                     /locus_tag="OQQ26_001432"
     CDS             23488..24573
                     /gene="mreC"
                     /locus_tag="OQQ26_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HCS1856927.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
                     AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
                     RLRELLSSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPTTGNAATA
                     PAANRSPQRATPPQSGAQPPACAPGGQ"
     gene            24573..25061
                     /gene="mreD"
                     /locus_tag="OQQ26_001433"
     CDS             24573..25061
                     /gene="mreD"
                     /locus_tag="OQQ26_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HCS1856928.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ
                     QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
                     VQ"
     gene            25070..25663
                     /gene="yhdE"
                     /locus_tag="OQQ26_001434"
     CDS             25070..25663
                     /gene="yhdE"
                     /locus_tag="OQQ26_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase YhdE"
                     /protein_id="HCS1856929.1"
                     /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
                     VVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
                     VMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
                     RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
     gene            25653..27122
                     /gene="rng"
                     /locus_tag="OQQ26_001435"
     CDS             25653..27122
                     /gene="rng"
                     /locus_tag="OQQ26_001435"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HCS1856930.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
                     VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
                     TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
     gene            27190..30990
                     /gene="yhdP"
                     /locus_tag="OQQ26_001436"
     CDS             27190..30990
                     /gene="yhdP"
                     /locus_tag="OQQ26_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709041.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein YhdP"
                     /protein_id="HCS1856931.1"
                     /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI
                     ESATGMPVEASQLSANWQNFGPTLEAHGIRAELKDGGEFSVKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLRFRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
                     QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRIWLQ
                     ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
                     HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
                     DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
                     FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLFTASMKQAKMPYETVFRAPLEIAD
                     GQATISWLNNDKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
                     QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
                     NAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLI
                     DADIKGQGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
                     TLRNNSLFIKPLDSTLKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
                     VAVNLNGNWQPAKTGVLPEAVNEALSGIVAWDGKVGIDLPYHAGATYNVELNGDLNNV
                     SSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGVDNHFNSRWLLGQKLTLDRAIW
                     AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAARFPQHITLRTPMLS
                     LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
                     GDSTPSSPFPTTERINFRGWPDAQIRCAECWFWGQKFGRIDSDLTISGDTLTLTNGLI
                     DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
                     WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
                     GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
                     EKAQ"
     gene            31146..32591
                     /gene="tldD"
                     /locus_tag="OQQ26_001437"
     CDS             31146..32591
                     /gene="tldD"
                     /locus_tag="OQQ26_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HCS1856932.1"
                     /translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
                     SGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS
                     GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD
                     GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
                     DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
     gene            complement(32719..33648)
                     /gene="aaeR"
                     /locus_tag="OQQ26_001438"
     CDS             complement(32719..33648)
                     /gene="aaeR"
                     /locus_tag="OQQ26_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HCS1856933.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL
                     QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRHLGA
                     MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRPIPQGRF
                     VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK"
     gene            33831..34034
                     /locus_tag="OQQ26_001439"
     CDS             33831..34034
                     /locus_tag="OQQ26_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HCS1856934.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
BASE COUNT         8452 a         8593 c         8764 g         8236 t
ORIGIN      
        1 agcgtgctga tatggctcag ttggtagagc gcacccttgg taagggtgag gtccccagtt
       61 cgactctggg tatcagcacc actttttagg ttaaagttcg gcagattaga aaagaatttg
      121 tctggcggcc ttagcgcagt ggtcccacct gaccccatgc cgaactcaga agtgaaacgc
      181 cgtagcgccg atggtagtgt gggggctccc catgcgagag tagggaactg ccagacatca
      241 aatcaagcga aaggccatcc gaaaggatgg cctttttgct tttcgaacta acattcaatt
      301 aatggattac ctgcgataaa aatgccctcg tacgctctga tttaggatgc gcaaaaaatt
      361 catcaggtgc agcttgctcc actatttccc tacgatccat aaaaatcacc cggtcagcga
      421 cggttcgcgc aaaccccatc tcatgcgtta cacacaacat tgtcataccc gattgcgcca
      481 gcccaatcat cgtatccagc acctctttca ccatctccgg atcgagcgcc gacgttggct
      541 catcaaacaa cataattttc ggcttcatac acagcgaacg cgcaatggca acgcgttgct
      601 gctgaccacc agaaatttgt ccgggaaact tatgcgcatg ttcggcaatt ctcacccgct
      661 caaggtaatg catcgccaga gcttcagcct ctttctttgg catcttgcgt acccaaatcg
      721 gtgctagggt acagttctgt agaacggtca gatgagggaa gagattgaaa tgctgaaaga
      781 ccattcccac ttcctgcctg acgcgctcaa tattgcggat atcttcatta agttcgatgc
      841 catctactac gatccgtccc tgttgatgtt cttccagatg attaatacaa cgaatggttg
      901 tcgatttacc ggaaccagaa gggccacaca gaacgatccg ttctcccagt tgcacggtta
      961 aatttatatt tttcaaaaca tggaattgtc cataccattt attgacgttt tccagcgtaa
     1021 tcatcgcgtt agcaggttgc agtaaaattt ggctcatagt gtcctcaatg cggtgtacgc
     1081 ccggtgttaa aacgtttttc cagatgctgg ctatagcgcg acatgctgaa acagaagatc
     1141 cagtagatca gcgcggcgaa aacataccct tccgtcgaca tacccaacca ggcgggatca
     1201 acggttgcct gctgaacgct actgaaaaga tcgaacaacc cgataatgat caccaggctg
     1261 gtatctttga agagtgcgat gatggtattt accagcccag gaattaccag cttcaacgcc
     1321 tgtggcagaa taaccagccc ctgagttttc cagtaaccca atgccagtga ctctgccgct
     1381 tcatattgcc ctttaggcag cgcctgtaat ccgcctcgca cgacttccgc aacatatgct
     1441 gactgaaaca ggatcacgcc aaccagcgcg cggatcagtt tgtcgatatt ggtgccttct
     1501 gccataaaca aaggcagcat gaccgaagac ataaacaata cggtaatcag cggtacgccg
     1561 cgccagaact cgataaaaat gaccgataag atacgcacaa tcggcatatg ggagcggcga
     1621 cctaacgcca gtaagatccc ccacggtagc gcccccgcaa tcccaacgga tgcaataatt
     1681 aaagttagcg tcagcccgcc ccattgccgg gtttcaaccc gctccagacc aaaaaaaccg
     1741 ccatacatca gccaccagac aatcagtggg taaatcaccg cccagaccgc aatatagcga
     1801 ccgcgatgcg ggagtatttt ccagaacatt ggtgcgattg acacaaggcc aatcagtaat
     1861 gccaggttaa ttcgccagcg ttggtcgtgt gggtaaagtc catacataaa ctgaccaaat
     1921 cgttcgtaga tgaagaccca acaggcaccg gcttttgtgc agtcggcacg cgttgagcca
     1981 acccaattag cctgcaaaaa tgcccagttt agcaacggtg ggatcagttc ccacatcaac
     2041 catatgcagc caatagtcag caggctattg ctccagctgg agaacagatt ttttcgcacc
     2101 cacaccatcg cgcggcttga gttatggctc gccgggcgcg agggctgaga cagcaatact
     2161 tttgtcatca tgactcctta gcgttcaacg atcgcgatgc ggcggttata gatattcatc
     2221 agcagcgaga tagtcaggct gataatcaga tagaccgaca tggtcatggc tatcgtctcg
     2281 atggcttgcc ccgtctggtt cagcacggtg ccagcaaaca gcgaaaccat atcgggatag
     2341 ccaatagcgg cggcaagaga ggagtttttg acgatgttga gatactggct ggttaacggc
     2401 ggaataatca ctcgcagtgc ctggggaata atgacctggc gtagcgtaac cgggttgggt
     2461 aatcccagtg accgagccgc ttcatgttga ccataaggca ctgcctggat cccagcgcgg
     2521 ataatctcgg cgataaatgc agatgtataa accgaaagtg ccagcgttaa ggctgccagt
     2581 tcaggaatta aaaccatccc gccgcggaag ttaaagcctc gtagggctgg gacatcccag
     2641 tgtagtgctg cgccaaaaag ccattgcgcc agtaaaggca aaccaatgat caacactgcg
     2701 gcgatcggcc aggtgcggcg cagttgtccg gtctttatct ggtatgtttt attaaagcgg
     2761 aatagcccaa cagaaaggac tatagccata acaacagcca ggataaacgc aataaatccg
     2821 tctcccagct gcggtgacgg aatataaagc ccacgattgc tcaaaaaggc cagatcaaac
     2881 gcgctcacag cctggcgtgg tccgggcaaa ttgcgcaaca cggcaaagta ccagaagaag
     2941 atttgcagca gcgggggaat attacggaag atctcaatat aaattgtgga tagctttcgt
     3001 agcagccagt tatccgaaag tctcgccaga ccgataaaga agcctaaaac agaagcgaac
     3061 acaatacaca atgcagaaac cagtagcgta ttgagtaagc cgacaataaa aacgcgtccg
     3121 taggtgtcgc cctgctggta atcgatcaaa tgctggacaa taccgaagcc agcgccgcga
     3181 tccagaaagg caaaacctga agtaatgcca cgattactga gattcgttac agtgttgtga
     3241 aataaccaac caacaatgcc gacaacagca acaacggcaa ggatctggaa taaccaggca
     3301 cgaaccgtag ggttggcaaa ggagagtgag cctttaacgg ttgagcggcg atgagacata
     3361 gaaacctcgg aaagcataac gctgaagaga gcgccgccgt agcgacgctc gttacctcac
     3421 accgacttaa cgcacgggcg gcgcgtactg aataccgccg ttattccaga gattattttg
     3481 cccacgttta attttcagcg ggctttctga acctacgtta cgctcgaaaa tttccgagta
     3541 gttacccacc tgtttgatga tgttataggc ccatttatta tccaacttca gatccttgcc
     3601 gtaatcgcct tctttaccca gcagatgtgc catatcaggc gttgctggat tagccgcttt
     3661 ttcatcgacg ttctgggaat tgatgcccat ctcttcagca ttcagcatgg cgaaaagcgt
     3721 ccagcgtaca atcgagaacc attcatcatc gccacgacga actaccggcc caagcggttc
     3781 tttagagata acctccggta agacaatcca ttcagctggg ttgcttaatt tgatgcgcag
     3841 ggcatacagt tgcgactgat ccgaggccag cgtatcgcag cgaccagatt ccagtgcctt
     3901 cgctgattcg tcagagcgat cgaaagtcac cggtgtgtac ttcatattgt ttgccttgaa
     3961 atagtcggca acgttgagtt cggtatcagt acccgcctga atacagacgg tagcgccatc
     4021 cagttctttc gcgcttttta gccccgcttt atcgtgcgtc aggaagccaa tgccgtcgta
     4081 ataagtgacg ccagtaaatg ccattcccat cccggcgtcg cgagatgaag tccaggtcgt
     4141 attacgggag agcaaatcca cttcccctga ctgtaaagcc gtgaagcgtt cttttgctgt
     4201 gagtggggta tatttcactt tcgtgtcgtc accaaataca gcagcggcaa caccacgaca
     4261 aacatcaaca tcaatacctg aaaacttacc gtctgcatcg gcataagaga acccaggtaa
     4321 tccatcactg atcccgcatt gcacaaaacc ttttttctga acggcatcaa gcgtcgcgcc
     4381 agcatgcgcc tgatttgcaa cggcaagcag cacgctggcg gcagccagtg tggctatcat
     4441 catctttttc ataatgcttc ctgtgaggcg aaaattatcg ttataggacg tttgggaaac
     4501 gtcttttacc tgtctgtggc catcctctta taagcaaaag tagtgccatt ttttgcgcac
     4561 gatttcgcgt cgcaataagc tgagtgtaga caggaaataa taaaaacagc gccccgcaat
     4621 ggtgcgaaaa tgaaacatgc gccacatttt ggcgcaaaat atttacgcgt gttttactaa
     4681 gcagaataat gattgttagc gtgagtatat ttctggtggg aagtgcgaaa gttaaattga
     4741 tgcgttattt cgaaagcagc gaaataacgc gatataacat gctaaatcag cagagaatta
     4801 gccagcagaa tatagcaata ttttatctta tgtaaagata ctgtatcgtt aaacagagcg
     4861 cgaaactccg cgccctgttc agttatttcg acagagcgat gatccccatc gtcaggccag
     4921 caacagctgc tgctccgcca gcaatagccc cagccgtttc ccagttatcc tgagttgtgc
     4981 ctttcataca ggtattggtg tgaaccagac gaccctgatc gtcataaact ggaacgcagg
     5041 gcgaatcgtg agcacagccc gccagcaatg cggtgagcaa tgccacagga attaatcttt
     5101 tcatggtgtt acctcagtaa taaacgctaa cgcttaataa gttaactctc ttattaacga
     5161 gctgaatgcc attttatcac cggaggttat aaatattgcg gaatgaataa tgacaaatta
     5221 tgtgaattgt aaaaatagtg aagggagcgg gaactataga aagtttttaa agagtgagtg
     5281 gaagaatatc ttattaattt ttatgggttt cactgaaaat aataagggca cccgaaagtg
     5341 cctttatgtt tctgatttat cctttaaagc aacggcggat caccacaaag aacaccggta
     5401 cgaagaagat tgccagcaac gttgcagaga ccattcctcc cattaccccg atacccactg
     5461 cgttctgcgc gccactgccg gcaccgttac tgatagctag cggtaatacg ccgagaataa
     5521 aggcgagaga ggtcatcagg ataggacgca gacgcatacg tactgccatc agtgtcgctt
     5581 caacaacacc tttaccctct ttctccatga gatctttagc gaactcaaca atcaaaatag
     5641 cgtttttggc cgacaagcca attgtcgtta gcaagcccac cataaagtag acgtcatttt
     5701 tttgattaaa gagtgttgcc gccagtagca cgccgacaat ccctaacggc acgaccaaca
     5761 taaccgagac aggaattgac cagctttcat agagtgcagc aaggcacagg aagacaacca
     5821 caaaggaaat tgctaccaga gcgggagcct ggtttcccga taagcgttcc tgatacgaca
     5881 tacctgtcca gtcataacca atgcccgcag gtaattttga cgcaaggttt tccatcaatg
     5941 ccatggcatc gccggaactg gttcctggcg cggcttctcc ctgaatctcc attgacggca
     6001 gaccgttgta gcgttccagt cgcggagagc catacaccca atgtgaagtg gtaaaggcag
     6061 agaatggcac catttcgccg ttggcgctgc ggacataaag tttatcgaca tcttccggca
     6121 gcatacggaa tttggcatcc gcctgaacat acaccttttt cacgcgacca cggtcgatga
     6181 agtcgttaac gtaagtccca cccaacgccg ttgaaatggt ctgattgatg tcagaaagtg
     6241 aaacacctaa tgcctgcgcc ttttcctggt caacttccag tttaaactgc gcggtgtctt
     6301 cctggccatt aggacgcacg ctgactaagc tggcaggatg ttgcgcagcc ataccaagca
     6361 actggttacg ggcctgggtt agggcatcgt gacccagccc agcctgatca attaactcaa
     6421 agtcgaaacc cgttgccgtg cccagttcaa caatggctgg catattgaat ggaatgacaa
     6481 aaccgtcgcg gatcttgccc aattccattt tggcacgatg gattaccgct tccgcactgt
     6541 tttcgtcacc attacgctct tcccacggtt tcagactgac gaaggccata ccggcgtttt
     6601 gtgcctggcc gctgaagcta aagccgttaa ccgtaaagac attttcaacg ttcgcttttt
     6661 cgttcttcag atagtaatcc gtcacttgat ccaacacttt ttgcgtccgc tcttgcgtcg
     6721 cgccagcggg tagctgaatc atggtcagaa agacaccctg atcctcttca ggtaagaagg
     6781 aagacgtaaa aacaacacca ccattcctgc aacaatcagc gcatagatca gtaaatatcg
     6841 tcctgtggaa ccgaggattt tgccgacgct gttggtgtag tggttaacgc tatgatcgaa
     6901 ggtggtatta aaccagccga agaaaccgcc cttattttcg tgatgctcag cagagacggg
     6961 tttaagcagc gttgcacata acgcaggggt aagaatcaat gccaccagaa cagaaagcgc
     7021 cattgccgaa acgatggtga tagagaacta gcgataaatt gccccagtag aaccgccgaa
     7081 gaatgccatc ggaataaata ccgctgacag caccatcgcg atacccacca gtgcgccctg
     7141 gatttgcgac attgattttt ccgtcgcttc ttttggcggg agcttatcct ccatcatcac
     7201 gcgctcgacg ttctccacca ccactatcgc atcatcgacg agcagcccga tggcaagcac
     7261 catcccgaac atcgttagtg tgttgatgga gtaaccaaaa gcggcgagga tggcaaacgt
     7321 ccctaacaac accacgggta ccgcaatggt ggggatcagc gttgctcgca tattctgcaa
     7381 gaacagatac atcactagga acaccagcat aatggcttcg aacagcgttt ttaccacttc
     7441 gtgaatagaa agctggacga atggcgtggt gtcataaggg tagagaacct tcattccctg
     7501 cgggaagaat ggctgtaatt ccaccagttt tgccttaatg gctttcgcgg tatcgagagc
     7561 attcgcgccg gttgccagct taatccccag gcccgccgcc ggttttccgt tgatacgagc
     7621 gataacgtta tagttttcac cgccaagttc aacccgtgcg acatctttca ggcgtaccac
     7681 cgagccgtca ctgtttacgc gcagggtcac tttgccgaat tcttccggat tttttaaccg
     7741 cgtctgagca ataatcgagg cgttcaattg ttgccctggt aacgctagcg ttccgcccaa
     7801 ctgtccggca gcgatctgat cgttctgtac cttcaactga ttaatcacat caaccggtgt
     7861 cagtttatat ttgtttagca gatcggcgtc tagccagata cgcatcgcat actgtgcgcc
     7921 gaaaagctgt atgtcaccga cgccattcag acggctaagc gtatctttaa cgttagaggc
     7981 cacatagtcc gagatatcgt cctgtgtggt gcctgggtta tcagagacaa agcccgccac
     8041 catcaaatag ctgctactgg acttttcaac actgatcccc tgctgctgaa cctcctgcgg
     8101 cagcaacggc gtggcgagct ggagtttgtt ctgcacctgc acttgcgcga tatcaggatc
     8161 ggtcccggac tggaaggtaa gggtaattgt cacgctaccg gcggaatcgc tggtggagga
     8221 catatacatc aggttatcga taccgttcat attctgttcg ataacctgcg tcaccgtatc
     8281 ctgcacggtc tgcgcatcag cgcccggata gtttgctgaa acagaaaccg caggcggtgc
     8341 aatggttgga tactgagcga cgggtaattg taggatcgcc agtgcgcccg ccatcatcag
     8401 aataatggcc agcacccatg caaatatcgg gcgtcgaata aaaaagtttg ccatgtcaga
     8461 ttaccttact tcgatgcagt atctgcgggg gtatcggtag tggctttaac ctgctctccc
     8521 ggacgcgctt tttgcaggcc gctgacaatg acttgatcgc cagatttcag accttcgcta
     8581 atcaaccatt tatcgccaat cgcctgactg gcaacgacag ggcgcgcttc cacctgactt
     8641 ttatcgttaa caatcagcac ggttgcatca ccacgcggtg tgcggctaac gccttgttgc
     8701 gggataagaa tggcgtcagg ttggacgcct tcatcaatcc gtgcgcgcac aaacataccc
     8761 ggcaaaagcg tatgttgcgg gttagggaag acggcacgta gggttatgga gccagtgctt
     8821 tcatcaacgg tcacatcaga gaattgcagc gtacctttca ggggataggt ttgaccgttt
     8881 tccatgacca actctacgtt gctggtggcg ttttccttat gcaaatttcc ttgctctacg
     8941 gattgcttca gcctcataaa atcgttgctg gattgggtca catcaacgta gataggatcg
     9001 agctgctgga cagtcgccag ttcagtcgtt tgcccattag tgacaagagc gccttcggtc
     9061 acggtcgatt tgccgatacg tccgctaatt ggcgcagtca ctttggtata agcgagattg
     9121 atgcgagcgc tttcgactgt ggcttttgcg gcaatcacgg cggcatcggc ctggtcgtac
     9181 tcctgctggc tgatgtattt cgtacccacg agcggaacgt aacgttttac cgtcaaatgc
     9241 gcgatggcgg cggcggcttc acttttcgcc agttcgcctt tcgcgctgtc ataatttgcc
     9301 tgataggtcg cgggatcgat ctggtacagg gactggcctg cttgtacatc gctgccttca
     9361 gtgaaattac gattcagtac gatcccgcta acctgtgggc gaacttcggc tatacggtaa
     9421 gcattggtgc ggcctggtaa ttcagtctta acttctaacg gggccgtttt cacaatatga
     9481 acggtaacct gcggttcacc gacgtgagct ttctcttctc ccttatcgtt acaaccggcg
     9541 attaaagccg cggagatcag aataaaggag ggcaggagga aaaacctggc atgtttcgtc
     9601 attactattc ctcaaaaaac caaaagcgcg ttatttaccc agaaaggcaa cgcgttaact
     9661 cgcagaaaga aaaatacagt ttgctatcct acaaattatc attcgtcgat gtaaggaata
     9721 gttatgaata ctggcgtctc aaggcacata aacacaaaaa aagattaata ttctacagtt
     9781 ttattttgac gcgggttgaa agaggcagaa ttaaaacctc gtaaattgaa atatatattc
     9841 atgtggcgaa tgtattttag gtaaataata tatattattt atttgacgat ttatagcaac
     9901 tcaatgttac cctctcgtat aaatacacat tagatgatag attaaccttc gctattctct
     9961 caccctgtgt cgaatatatt tatttcctga ataattaatc atggcaaaaa gaaccaaagc
    10021 cgaagctctg aagacccggc aagaactgat tgaaactgcc atcgcccagt ttgcgcaaca
    10081 tggcgtaagc aagacgacgc tcaacgacat tgccgatgcc gctaacgtta cgcgtggcgc
    10141 tatctactgg cacttcgaga acaagaccca actgtttaat gagatgtggt tgcaacagcc
    10201 ttcattgcgg gagttaatcc aggaacactt gacggctgga ttagagcatg acccgtttca
    10261 acaattgcgt gaaaaattga ttgtcggctt gcaatatatt gccaaaattc cccgccagca
    10321 ggcgttgctg aaaatcttat atcacaaatg tgaatttaat gatgagatgc tggccgaggg
    10381 agtgatacgc gaaaagatgg gctttaatcc gcagactctc cgcgaagtat tgcaggcgtg
    10441 tcagcaacaa ggttgtgtag caaataacct cgatttagat gttgtgatga ttattattga
    10501 tggtgccttc agcggaattg ttcaaaactg gttaatgaat atggcgggtt atgatcttta
    10561 taaacaagca cccgcgctgg tcgataacgt attaagaatg ttcatgccag atgaaaacat
    10621 aacgaaatta attcatcaaa cgaatgaatt aagtgtcatg taaattcaca ttctgtcctg
    10681 aaaattcagt tcgtcacagt taaccagttt tagtggatta actgagttca tattacggca
    10741 tttgtctgtt tctgttgtca gcagttcaat ccactgcatc agtaaagtat caaacagaaa
    10801 aacgaagaca gcgaaaacga cgagccacca atacttgcga atcattacct gagcctgtgc
    10861 atgtttaacc aagtctggca ggaaatatac acgaaatgaa taatctgaaa accaggctta
    10921 cacttccttt actttgcaat gagatcgggg tcaacttcgc ttaaccggct tcgttttgac
    10981 aggttgccgg tctttctttt tttcactttc gccagttctt ccgcagagta atgcgacgcg
    11041 acatccagcc gtcgaagccc cattttgatg tactcgctgt tgatctcaat accaatgaat
    11101 tttcgcccgc tggagacggc tacggcaccg gtagtaaagc taccggcaaa cgggtcgaga
    11161 acgatatcgc ctgggttgga agaggcgaga ataatgcgtt tcagtaaggc ttccggtttt
    11221 tacgtcgggt ggttctcata ttcatccatc aaataacgca cgcgcggaaa atcccagacg
    11281 ttacccggta ctttttgatg attgtatggc tgtggaggat ttttgcgata atcgatcaac
    11341 gcgcgctgcg atccggtttt ggcttctacc agaatagcat caccgttgaa tgtgtagttc
    11401 tttgcgtctt tcaccatcat caggatgggt tcgtacatgg agccgtagtg ttttttcgcc
    11461 tgtactccag aactgtcata tgaccagacg atgcgacttt tgatggtaaa aagcttgcgg
    11521 cactggagat cgataaaggg catgttttcc gtgctgttca tgatgtacat gctgccctgc
    11581 tttttcagaa cgcggtggca ctctgcaatc acttcaaaca gccagtcgat aaacagatct
    11641 tctttccagg cttcgatcag accatcaaaa tttttaccga tgttatatgg tgggtcggca
    11701 aagatcagat cgacactttc ggcggggatc tttttaagtt cggcaagcgc atcaccgtga
    11761 ataatggtct tagcttcatt accaaaccgg gtcggttcac atcctgttct catggtcact
    11821 ccctttgtga cacctataaa gaaggcgctt ccccatgccg agtagcgcct ttttaatcaa
    11881 gcatttagct aacctgaatt agttcatgcc gtattttttc aattttttac gcagcgtacc
    11941 acggttgatg cccatcatca gcgcagcacg ggtctggtta ccacgggtgt attgcatcac
    12001 catgtccaac aggggctgtt ctacttcagc cagtaccagc tcatagaggt cattcacatc
    12061 ctgaccattc agttgagcaa aatagttctt cagtgcctgt ttaaccgagt cacgcagggg
    12121 tttttgggtt acctgatcct gagagttaac ggtagaaacg gtcagtacgt cagaatttac
    12181 gcgttgttcg aacatagttc tgtcagctct ttatttctgt ttacgcaaaa ttttcgaagt
    12241 atgcctccaa cgcctccagc tgttcgctgg catcctcaat ggcgttgaat gtgcgccgaa
    12301 actggtcatt tggagcgtgt tcctggagat accaggaaac gtgtttacgt gcaattcggt
    12361 acccttttgc cggaccataa aagtcatgca gttcccgaac gtgcgcgcaa agcaagcgct
    12421 taacctctgc caaaggcagc gggggcagca actccccagt gtccagataa tgctggattt
    12481 cccgaaagat ccagggtctt ccctgagctg cgcggcctat catcagggca tccgcccctg
    12541 tatagtcgag cacagctctg gctttaagcg ggtcagtaat gtcgccattc gcgataaccg
    12601 gaatggaaac tttctgctta actgcccgaa tactgtcgta ctcagcttct ccattgaaca
    12661 aacaggcgcg tgtacggcca tgaatggtca gagcctgaat gccacagtct tcagccagtt
    12721 gggcaatctc ttcgcagtta cggtgttccg gtgcccagcc ggtgcgaatc ttcagggtaa
    12781 caggaacgtc cactgcattg acgacctcgg taaggatcga tttaacgaca tccgggtact
    12841 gcaagagggc tgaacctgcg agcttgcgat tcactttttt agccgggcaa cccatattga
    12901 tatcaataat ctgggcaccg ctttccacgt taatacgtgc tgcatctgcc atttctttcg
    12961 gatcgctacc agcaatttgc acggtgcgaa taccgggttc atcaatgtgc accatccgta
    13021 aacgagattt gtcgctttcc caaacctgtg ggttagaaga catcatctcg gatactgtca
    13081 atccggctcc catctcgtag cacaacgtcc gaaaaggtct gtctgtaatg ccagccatgg
    13141 gcgctgcgat caggcgattt ctgagctgat attgtccgat gcgcatgagt taagaaatga
    13201 ccatactgtg actgcaaggc ggcgtatatt acgcattttt tgcacgagat gaaaggccaa
    13261 actttgacca atcctctgag atggatcaaa gaattgcatt taaaatgagc gtggtgcgat
    13321 aattactcat aaaaatcatc atattagaaa atagtgacta aaatttacac tcaaagaaat
    13381 ttgagtaagt tctcaatttt tctttatgaa tgaaaatttt ggcacgcaaa tttgcgtaaa
    13441 taatcggcaa atttacgtgc cttttgtgag cttgctcgca cttcgccccg cgtcacccta
    13501 cggcgatgcg aaggttaatt cttacgaccg gtaatgcggc accactcttc tttttccacg
    13561 accgggtcca gtgcgaagct gtcgacataa gcttcacaaa cgctctctgc ctggcttgcc
    13621 agaataccgg aaaggcccag caaaccgcct gaaaccggca ggacgctgat taacggtgcc
    13681 agttcacgta atgggcctgc aaggatgtta gcgaccacca cgtcggcttt catttcttct
    13741 ggctgatctt tcggtaagta gagttccaga cggtcagaaa cgccattacg ttcggcgtta
    13801 tcgcggctgg cctgaatcgc ctgcggatcg atatcaatac caatggcttt tgctgcaccc
    13861 agtttcagcg ccgcaatagc cagaatgccg gaaccacaac caaagtcgat gactgtttta
    13921 ccggttaaat cgaggctgtc gagccattgc aggcacagag aggtagttgg atgggtaccc
    13981 gtaccaaacg ccagccctgg gtctaacatc acgttgacgg cgttttcgtc cggcacatca
    14041 cgccagcttg ggcagatcca cagtcgttca ccaaagcgca tcgggtggaa attatccatc
    14101 cattcgcgct cccagtcttt atcttccagt tgctcgattt tatgcgcgaa gcctgcgccg
    14161 agcagcggat ggttttccag aatcgccacc acgtcgttca tatcggtttc agcgtcgaac
    14221 agaccaatca catcggtgtc gccccacagg cgcgtttcgc ccggcagcgg ctcaaatact
    14281 ggcgtatcgt gggtatcctg aaaagtgata gaaacggcac ccgcttccat cagcgcatcg
    14341 ctaagatctt ccgcgttcgc gccggtggtg ttcagtttca gttggatcca aggcatggca
    14401 aaactcttta tttatcagta gtcaaaacgg tagcttgcgg gacggatgta ccgaaacggt
    14461 ttccgaccag gaaagccaga aaacttagta gtaacgaggg cacgataggg tggaagccca
    14521 ggtactgaat attcagcgtc gcgagtacgg catacagcac gccgccaacg agcatcgcac
    14581 ttagcgcgcc tttggcgttg gcgcgttccc agtaaagacc cagcaccagc ggccacagga
    14641 aaacggcttc cagcccaccg aaggccagca aattcagcca gatgatcatt tctggcggct
    14701 tccaggcggc aagtagcagc aacgcgccga gaactaacgt aattaccgcc gacatccgct
    14761 tcagacgcgt ctcgttttgc atttgatccg gacggatatt cagatagaga tctttaatga
    14821 tcgtagcgga actttgcagc aactgggcat tgatcgtcga catgatcgca gccataggtg
    14881 cagccaggaa gatcccggca gcaaacggtg gcagcacttt taccattaac gtcgggatca
    14941 ccagatccgg tacggtgaga tcggggatca ctgcacgacc taacgctccg gccagatgca
    15001 taccgaacat caggattgcg actacaatcg taccgatgat gatcccccgg tgtactgctt
    15061 tgctgtcttt ataagagata cagcgcaccg cagtatgcgg caggccaatc acgccaaaac
    15121 acaccagcac ccagaacgac gtcataaagg caggcgacag aatatcgtca gcgccttgtg
    15181 gcgtaaccag ttgcggatcg atggtttgca gcgtgtctac cgcattactt aaaccacctg
    15241 cggcatgtac cacgccaata agcagcacaa cggtgccaat cagcatcacc agcccttgca
    15301 tggtgtcgtt cagcacgctg gcgcgaaagc caccaaaggc ggtatacaac gcaatgctga
    15361 taccgaaaat cagcagcccg gtttcataag gaatacccgc cgcggtttcc agcaggcgcg
    15421 caccgccgat aaactgcacg gtcatcgcac caacgaaagc aaccagcaaa ctcaaactcg
    15481 ctagccacac cagaagacga ctctggtagc gggcaaacag catatcgttc agcgtcactg
    15541 cattgtagcg gcgcgcaaga atcgcgaact tcttgccgag aataccgagt gaaagccaga
    15601 ctgcaggaag ctgaatcatc gccagcaata cccagcctag gccgtattta taagcagctc
    15661 ctggcccgcc gataaacgaa ctggcactga tataggtcgc ggtgagcgtc atcgccagca
    15721 caataccgcc catagagcgg ctgccgagga aatactcatt aaggaaggtg ccggtgctcc
    15781 gtttacgcat cgcataaacc gagataccga acaccaccac cagataggcg accagcggta
    15841 gaattacttc aagctgcatc gtcatcctcc agcgggatat cgcgatagat aaatttcacc
    15901 atcgcccagc acagtccaat aaacagcagc ggcgtcagga tgcaggccat ctcaaaccag
    15961 cgcggaaagc cggtaaaacc gggggcaacg ccaggtaagt aagcggctac taaccaaacc
    16021 gccagataca aaagggtcag ccccagcgcc cagtgcgcct ctttatgggc ctgaacaaaa
    16081 cgagtgtcca ttttttgtcc ctgatgggtg aagaaagcga ggattgtacc ttatgggggt
    16141 tgtcgatccc cagtaataaa aaaggccgga aaatccggcc ttttgacgct tttgcagtct
    16201 tatttttcct gaagaccgag ttttttctcc agatagtgga tgttagtacc accatgctgg
    16261 aagttctcgt cattcatgat gcggatctgc agatcaacgt tggttttgat accgtcgatg
    16321 atcagctcct gcagcgcatt cttcatgcgg gcaatcgcca cgtcacggtt ttcaccgtag
    16381 caaatcagct taccgatcat tgagtcatag tacggcggta cggtgtagcc cgcgtagata
    16441 tgagactccc aacgtacgcc aaaaccgcca ggtgcgtgga aacgggtgat tttgcccgga
    16501 cttggcagga aggtgttcgg atcttcggcg ttgatacgac attccaccgc atggccgcga
    16561 acgtgaactt cttcttgctt gatcgacagc ggttgaccgg cagcgatacg caactgttct
    16621 ttgatcaggt caacgccggt gatcatttct gtaaccgggt gttctacctg aatacgggtg
    16681 ttcatttcga tgaaatagaa ctcgccgttt tcgaacagga actcgaaagt acctgcaccg
    16741 cgatagccga tatcaacaca cgctttagcg caacgttcgc cgatgtagcg acgcagttcc
    16801 ggggtaatgc ccggtgctgg tgcttcttcg accactttct ggtggcggcg ctgcatggag
    16861 cagtcacgtt ccgccagata gatagcgttg ccctgaccgt cagccagtac ctgaatctcg
    16921 acgtggcgag gattttccag gtatttctcc atgtaaacca tatcgttgct gaaagcagct
    16981 ttcgcttccg cacgggtcat ggagatggat tgtgccagtt cagcgtcgcc gcgcactacg
    17041 cgcataccgc gaccaccgcc gccgccggag gctttgataa tcaccggata accaatgcgt
    17101 ttagcaatgg cacggttttt atccatatcg tcgcccagcg ggccgtcaga acccggtacg
    17161 caagggacgc ccgctttttt catcgccgcg attgcggata ctttgtcgcc catcaggcga
    17221 atggtttctg ctttcgggcc aatgaagata aagccggagc gttcaacctg ctcggcaaag
    17281 ttggcgttct cggagaggaa gccgtaaccc ggatggattg ctactgcgcc ggtgatttca
    17341 gcggcgctga tgattgccgg gatgttcaga taacttttta ctgacggagc agggccaata
    17401 cagaccgttt catctgccag taatacgtgt tttagatcgc gatccgcgct ggagtgcaca
    17461 gcgacagtct tgatgcccag ttctttacag gcacgaagaa tacgcaatgc aatctcgccg
    17521 cggttggcaa taacaatttt atccagcatg tttgcctcgt tactcgatga cgaccagcgg
    17581 ctcgtcaaat tctaccggtt gtccactttc gaccagaatt gctttcacgg taccggattt
    17641 gtccgcttcg atctggttca tcattttcat ggcttcaacg atgcacaggg tatcgcccac
    17701 gttgactttc tgacccactt cgatgaacgc ttttgcgtcc gggcttgggg tgcggtagaa
    17761 agtaccaacc atcggggaac gtacgatgtg accactgatt tccgctgctg ctggcgcttc
    17821 catggaagga acggtcgccg gagcggctgc gttagattga gctggctgct gcatcattgg
    17881 tgcagcgtaa gcttgttgca tcacagggaa acttgcggca ggagctgcac ggctaatgcg
    17941 tactgactct tcgccttcag aaatttccag ttcggagatg cctgattctt caaccagctc
    18001 gatcagtttt ttaatcttac gaatatccat gagtgggttc cgtactcttt gtttagtgtg
    18061 attgtgacag gcgtttcacc gccgtctgta aagcgtatgc cccgacagct gtatgcatag
    18121 cgataaattc cagcaggccg ggacgccggt ctattttgcc ccagagtgtc aatgttagac
    18181 ttgacggaca ttgtgcagcg atctgctgct atcctccggc aaaaaacaaa atataccttc
    18241 gttgcgccaa tgtcaccttt tccgcagcgc aaaaactgcg tcagggagga cgaggtcgca
    18301 cattataacg atttcgtagc aattggcagc taaatactgg tcttatcagg gaagataatc
    18361 aacagctaac atgtaaataa ccttcaacac cgtgtaattt gcaacaagcc gcacaattca
    18421 cgaaattagc gccatcatcg acggaacttc ttataacgta aggtgaaaag ctgtaaagcc
    18481 agccctgcga agatgagggg ctgcaatgag ataatcttca cagaccacaa ataatgtagg
    18541 gatgccagga tcgcgacaag atagacgaca ttacgcagcg gttgctgggg attacccaat
    18601 tttcactgca tcgtctggat agatgtgaat gctaaagcac gcaaaattaa ccgattgaca
    18661 atgctcagca ttaaataggt tcgagtgatt aatttgtagt caaacaaaat cagattattc
    18721 accccgtggt aacagaaatc agtaacaggt taagcgtagt gtcgcccagg caaagcacca
    18781 taaacctaac aggcgacgga ggcgtatcaa taatggctgt ttagtggagt atcaatgcgc
    18841 atcaatttat ggtcagtcga aatcatgact ttccagtttg gatgatgttg tacaacttca
    18901 tgaccaaggt gttcgacgaa agctgtccgg ctaaccgctt ttcccgttaa ccgattgaat
    18961 aatgatttca aaatgagttc cctctcttat tattccttgc taaatggtta gttaaccttc
    19021 accagcgtgc gaccctggat ctggttatta atgatggcct cggcaaagtt cggtgcctct
    19081 gacagagata tctcttttgc cgcctgggta tagaatgatt ccggtaaatc ggcgaccagt
    19141 cgctgccagg cttgtgcgcg gcgttctggt ggcgtcatta ctgaatccac cccttgcaaa
    19201 cggacattac gcagaataaa tggcatgacc gtggttggca gagtaaaacc acccgccaga
    19261 ccacaggccg ccacgcagcc gccgtaattc atttgcgcca gcacttttgc cagcactttg
    19321 tcgccaacag tgtcaattgc cccagcccag acttgttttt ccagaggacg ggattcggca
    19381 aactcatcac gagggagaat acgactggca cctaaacttt tcagatattc atgggtactt
    19441 tcgcgaccgg aaacggcaac gacctgataa cccaacttat gcagcagcgc cacggcggta
    19501 ctgccgacgc caccactggc acccgtcacg acaatctccc cgtcctgcgg gcgaacaccg
    19561 gcatcttcca gcgccatcac acacagcatg gcggtaaaac cggcagtacc gataatcatt
    19621 gctttacgcg cgtccagccc ttgcggcatg gcaaccagcc agtcaccttt cactcgcgcc
    19681 tgctccgcca gcccacccca gtggttttca ccaacgcccc agccagtgag taacacctcc
    19741 tgaccggcat gaaaacgcgg atcttcgctg gtgcgtacag ttccggcaaa atcgatccca
    19801 ggaatcatcg gaaaattacg gatgattttt cccttaccgg taatcgccag cgcatcttta
    19861 tagttcaggc tcgaccagtg aacatcgacc gtgacatcgc cctccggcag gcgactttcg
    19921 tccagagtct gtactgatgc gagagttttg ccgtcctgct gttctaaaag taacgcctgc
    19981 ataagtggtc ctcatgtgca tgatggattg gaaaataatt tctgaagact atactcgcta
    20041 atggaaaagc aaagccgatg aagcgcaata aattgcgaga taaatctgat ttgctagtat
    20101 gcccgcttcc tcactatcgg agttaacaca aggatgagat taacgacgaa attttcggcc
    20161 tttgttacgc tgctcaccgg gttaacaatt tttgtgactt tgctgggctg ttcgctaagt
    20221 ttctacaacg ccattcagta taagtttagt catcgcgttc aggcggtggc gacggcgatt
    20281 gatacccacc ttgtgtcgaa tgacttcagc acattaaggc cacaaattac cgaattaatg
    20341 atgtcggcag atatcgttcg tgtagacctg ctccatggtg ataagcaggt ttataccctt
    20401 gccagaaatg gtagttatcg tccggttggc accagcgatc tgtttcgcga actgagcgtt
    20461 ccgctgataa agcatccggg gatgtcgctg cgtctggttt atcaggatcc gatgggcaac
    20521 tatttccatt cgttgatgac caccgcgccg ctcacagggg cgattggctt tatcattctt
    20581 atgctctttc tggcggtacg ctggttacaa cggcaacttg ccgggcaaga attgctggaa
    20641 acccgggcta ctcgtatctt aaacggtgag cgtggctcta atgtgttggg aaccatctat
    20701 gaatggccgc ccagaaccag cagtgcgctg gatacgctgc ttcgtgaaat tcagaacgca
    20761 cgcgaacaac acagccgtct tgatacgctg atccgctctt atgccgccta ggacgtgaaa
    20821 accggcctca ataaccgact ctttttcgat aatcagttag caacgttact ggaagatcag
    20881 gagaaagtag gtacccacgg gatcgtgatg atgattcgtc tgccggattt caatatgttg
    20941 agcgatacct gggggcacag ccaggttgaa gaacagttct tcaacctgac gaatctgctg
    21001 tcgacattta tgatgcgcta ccctggcgca ctgctggcgc gttaccaccg cagtgatttt
    21061 gctgcgctgt taccgcaccg gacgttaaaa gaggcagaga gcatcgccgg tcagttaatc
    21121 aaagccgtcg ataccttgcc gaacaataaa atgctcgatc gcgacgatat gatccacatt
    21181 ggtatttgcg cctggcgtag tggtcaggat accgagcagg taatggaaca tgcagagtct
    21241 gccacgcgta atgcgggatt gcagggcggc aatagctggg ctatttacga tgactcgttg
    21301 cctgaaaaag gacgcggtaa tgttcgctgg cgtacgctta tcgagcaaat gctcagtcgc
    21361 ggcggcccgc gcctttatca aaaaccggcg gttactcgcg aaggtcaggt tcatcatcgc
    21421 gaactcatgt gccgcatctt tgatggtaat gaagaggtta gctcggcgga gtatatgccg
    21481 atggtcttgc agtttggctt atcggaagag tatgaccgtc tgcaaatcag ccgtcttatt
    21541 ccactattgc gttactggcc agaggaaaat ctggcgattc aggttaccgt tgagtcgctg
    21601 attcgcccgc gttttcagcg ttggctgcgc gatacgttaa tgcaatgtga aaaatcacaa
    21661 cgaaaacgca taattattga acttgcagag gccgatgtag gtcaacatat cagtcgttta
    21721 caacctgtta ttcgtttagt gaatgcttta ggggtacggg tagccgtcaa ccaggctggt
    21781 ttgacgctgg taagcaccag ttggatcaaa gaacttaatg ttgagttact caagctccat
    21841 ccggggctgg tcagaaacat tgagaagcga acggagaacc agttgctggt tcaaagcctg
    21901 gtggaagcct gctcagggac cagcacccag gtttacgcca ccggtgtgcg ttcgcgaagc
    21961 gagtggcaga ccctgattca gcgcggtgtt acaggcgggc aaggggattt tttcgcgtcc
    22021 tcacagccac ttgatactaa cgtgaaaaaa tattcacaaa gatactcggt ttaacctgcc
    22081 gtttaatccg ttttcacgta gaataacgcg cgctgcgtct catgggagtg tgcttgtctg
    22141 ctcgccagat tgttgcagca catatgcaga tgaatgacct tacgcggttg caaacaggcg
    22201 aggaatgctg ctgatgcatt aagcctttct ggactcaggc agagatttgt aacaaaggaa
    22261 acgaactgca ctaattttca ccgtagcaga tgatttttgc gccttgtcgc tgctgcgtgt
    22321 ggttggtaaa gtaagcggat tttcttttcc gccccagctt tcaggattat cccttagtat
    22381 gttgaaaaaa tttcgtggca tgttttccaa tgacttgtcc attgacctgg gtactgcgaa
    22441 taccctcatt tatgtaaaag gacaaggcat cgtattgaat gagccttccg tggtggccat
    22501 tcgtcaggat cgtgccggtt caccgaaaag cgtagctgca gtaggtcatg acgcgaagca
    22561 gatgctgggc cgtacgccgg gtaatattgc tgccattcgc ccaatgaaag acggcgttat
    22621 cgccgacttc ttcgtgactg aaaaaatgct ccagcacttc atcaaacaag tgcacagcaa
    22681 cagctttatg cgtccaagcc cgcgcgttct ggtttgtgta ccggttggcg cgacccaggt
    22741 tgaacgccgc gcaattcgtg aatccgcgca gggcgctggt gcccgtgaag tcttcctgat
    22801 tgaagaaccg atggctgccg caattggtgc tggcctgccg gtttctgaag cgaccggttc
    22861 tatggtggtt gatatcggtg gtggtaccac tgaagttgct gttatctcct tgaacggcgt
    22921 ggtttactcc tcttccgtgc gcattggtgg tgatcgtttc gacgaagcta tcatcaacta
    22981 tgtgcgtcgt aattacggtt ctctgatcgg tgaagccacc gcagaacgta tcaagcacga
    23041 aatcggttcg gcttacccgg gcgatgaagt ccgtgaaatc gaagttcgtg gccgtaacct
    23101 ggcagaaggt gttccacgcg gttttaccct gaactccaac gaaatcctcg aagcactgca
    23161 ggaaccgctg accggtattg tgagcgcggt aatggttgca ctggaacagt gcccgccgga
    23221 actggcttcc gacatctccg agcgcggcat ggtgctcacc ggtggtggcg cactgctgcg
    23281 taaccttgac cgtttgttaa tggaagaaac cggcattcca gtcgttgttg ctgaagaccc
    23341 gctgacctgt gtggcgcgcg gtggcggcaa agcgctggaa atgatcgaca tgcacggcgg
    23401 cgacctgttc agcgaagagt aatcggatgc aggcagggga agcgtctgtt taccctgcct
    23461 ggtctgatac gagaatacgc ataacttatg aagccaattt ttagccgtgg cccgtcgcta
    23521 cagattcgcc ttattctggc ggtgctggtg gcgctcggca ttattattgc cgacagccgc
    23581 ctggggacgt tcagtcaaat ccgtacttat atggataccg ccgtcagtcc tttctacttt
    23641 gtttccaatg ctcctcgtga attgctggat ggcgtatcgc agacgctggc ctcgcgtgac
    23701 caactagaac ttgaaaaccg ggcgttacgt caggaactgt tgctgaaaaa cagtgaactg
    23761 ctgatgcttg gacaatacaa acaggagaac gcgcgtctgc gcgagctgct gagttccccg
    23821 ctgcgtcagg atgagcagaa aatggtgact caggttatct ccacggttaa cgatccttat
    23881 agcgatcaag ttgttatcga taaaggtagc gttaatggcg tttatgaagg ccagccggtc
    23941 atcagcgaca aaggtgttgt tggtcaggtg gtggccgtcg ctaaactgac cagtcgcgtg
    24001 ctgctgattt gtgatgcgac ccacgcgctg ccaatccagg tgctgcgcaa cgatatccgc
    24061 gtaattgcag ccggtaacgg ttgtacggat gatttgcagc ttgagcatct gccagcgaat
    24121 acggatattc gtgttggtga tgtgctggtg acctccggtc tgggcggtcg tttcccggaa
    24181 ggctatccgg tcgcggttgt ctcttccgta aaactcgata cccagcgcgc ttatactgtg
    24241 attcaggcgc gtccgactgc aggactgcaa cgtttgcgtt atctgctgct gctgtggggc
    24301 gcggatcgta acggcgctaa cccgatgacg ccggaagagg tgcatcgtgt tgctaatgaa
    24361 cgtctgatgc agatgatgcc gcaggtattg ccttcgccag acgcgatggg gccaaagtta
    24421 cctgaaccgg caacggggat cgctcagccg actccgcagc aaccgacgac aggaaatgca
    24481 gctactgcgc ctgctgctaa tcgctctcca caaagggcta cgccgccgca aagtggtgct
    24541 caaccgcctg cgtgtgcgcc gggagggcaa tagtggcgag ctatcgtagc cagggacgct
    24601 gggtaatctg gctctctttc ctcattgcgc tgttgctgca aatcatgccc tggccggaca
    24661 acctgattgt tttccggcca aactgggtgt tactcatctt gttatattgg atcctggcct
    24721 tgccccatcg cgtaaatgtg ggcacaggtt ttgtgatggg tgccatactg gatctgatca
    24781 gcggctcgac gcttggcgta cgcgtattgg cgatgagcat cattgcttac ctggtggcgc
    24841 tgaaatacca gcttttccgc aacctcgcat tatggcagca ggcgctggtc gtcatgttgc
    24901 tttcgctggt ggtggatatt attgttttct gggcagagtt tttagtgatt aacgtctctt
    24961 tcagaccgga agtgttctgg agtagtgtag tcaatggggt gctctggccg tggattttct
    25021 tgctgatgcg caaagtccgt cagcagtttg cagtgcaata aaggtttcta tgacttctct
    25081 gtatttagct tccggttctc cgcgtcgtca ggagttactt gcgcaacttg gcgtgacctt
    25141 tgaacgtatt gttacgggca ttgaggagca gcgtcagccg caggagagcg cgcagcagta
    25201 tgttgtgcgt ctggcgcgcg agaaagcacg ggcaggtgtc gcgcaaacgg cgaaggatct
    25261 cccggtgctg ggtgcggata ctatcgttat cctgaacgga gaagtgctgg agaaaccgcg
    25321 cgacgcagag catgcggcgc agatgttgcg caaattatcg ggtcagaccc atcaggtgat
    25381 gacggcagtg gcgttggccg acagccagca cattctcgat tgcctggtgg tcaccgatgt
    25441 gactttcaga acgttaacag acgaagacat cgcgggctat gtcgccagcg gtgaaccgtt
    25501 agataaagca ggtgcatacg gtattcaggg gctgggtggc tgttttgtca ggaagataaa
    25561 tggcagctat cacgccgtag tcggcttacc gctagttgaa acgtatgaat tattaagtaa
    25621 ttttaacgca ctgcgtgaga aaagggataa acatgacggc tgaattgtta gtaaacgtaa
    25681 cgccttcgga aacgcgagtg gcgtatattg atggcggtat tctgcaggaa attcatattg
    25741 aacgtgaggc gcgacgcgga atagtaggca atatctacaa gggtcgtgta agtcgtgtac
    25801 ttccgggtat gcaggcggct tttgtagata ttgggctgga taaagccgcg tttcttcatg
    25861 catccgacat catgccgcac accgaatgtg tggcgggtga agaacaaaag caattcacgg
    25921 tgcgcgacat ctcggaactg gttcgtcagg ggcaagatct gatggtgcag gtggtgaaag
    25981 atccgcttgg cactaaaggt gcgcgcctga ccaccgatat cacgctgcct tctcgctatc
    26041 tggtctttat gccaggggct tctcacgttg gggtttccca acgtattgaa agcgaatccg
    26101 aacgtgaacg cctgaaaaaa gtggtcgcag agtattgcga cgagcagggc gggtttatca
    26161 tccgtaccgc agcggaaggg gttggcgagg ctgaactggc ttccgatgcc gcttatctga
    26221 aacgcgtctg gaccaaagtt atggagcgta aaaaacgccc gcagacccgt tatcagctgt
    26281 acggcgaact ggcgctggcg cagcgtgttc tgcgtgattt cgccgacgcc gaactggacc
    26341 gtattcgcgt tgactctcgc ctgacttacg aagcattact tgagtttacc tcggagtaca
    26401 ttcctgagat gaccagcaag ctggagcatt acaccggacg ccagccgatt ttcgatctct
    26461 ttgatgtcga aaacgaaatc cagcgagcgc tggaacgcaa agtagaactg aaatccggtg
    26521 gttatctgat tatcgaccag accgaagcga tgaccaccgt ggacatcaat accggagcgt
    26581 ttgtcggtca tcgcaatctg gacgacacca ttttcaatac caatattgaa gcgacgcagg
    26641 ctatcgctcg ccagttacgg ttgcgtaatc tgggcgggat tatcattatt gatttcatcg
    26701 atatgaataa tgaagatcac cgccgccgcg tgctgcactc gctggagcag gcgttgagca
    26761 aagaccgggt gaaaaccagc gttaatggtt tttcggcgct ggggctggtg gagatgacgc
    26821 gtaaacgcac ccgcgaaagc attgagcacg tactgtgtaa cgaatgccca acctgccacg
    26881 gtcgcggaac ggtgaaaacc gtggaaacgg tatgctatga aatcatgcgc gagattgttc
    26941 gtgtccacca tgcttacgac tccgaccgtt tcctggtcta tgcttctccg gcagtagctg
    27001 aagccttgaa aggcgaagag tcacactcgc tggcggaagt ggaaattttc gttggtaaac
    27061 aggttaaagt acaaattgaa ccgctctata accaggagca gtttgacgtc gtaatgatgt
    27121 aaacagatgc tgggccgcca tccggcaaag ggtttttgag tcacatattt agcagacaag
    27181 gagtgacggg tgaggcgatt gccggggatt ttactgctta ctggagccgc gctcgttgtg
    27241 atcgctgccc tgctggttag cggcctgcgt attgctttac cgcatcttga cgcctggcgt
    27301 ccggaaatcc tcaacaaaat agaatccgcg actggcatgc cggttgaagc cagtcagctc
    27361 tcagccaact ggcagaattt tggcccgacg cttgaagcac acggcatccg tgcagaacta
    27421 aaagatggcg gcgaattttc ggttaaacgc gttactctgg cgctggatgt ctggcagagc
    27481 ctgttacata tgcgctggca gtttcgcgac ctcactttct ggcagctgcg ctttcgcacc
    27541 aacactccta tcaccagcgg tggtagcgat gacagtctgg aagccagtca catcagcgat
    27601 ctgtttcttc gtcaatttga ccatttcgat ctccgcgaca gtgaagtcag tttcctgacg
    27661 ccatccggtc agcgtgccga gctggcgatc ccacaactca cctggctgaa cgatccacgt
    27721 cgacaccgtg cggaaggcct ggtaagcctc tccagcctta ccggacagca cggcgtgatg
    27781 caggtgcgca tggatttgcg cgatgatgag gggttgttaa gcaatggtcg catctggctc
    27841 caggcggatg acatcgacct gaagccgtgg ctcggtaaat ggatgcagga caatattgcg
    27901 ctggaaacgg cacagttctc ccttgaaggc tggatgacga tcgacaaagg cgatgtaacc
    27961 ggcggtgacg tctggctgaa acagggcggt gccagctggt tgggcgagaa gcaaacgcat
    28021 acgctgtcgg tggataatct gaccgcgcat attacgcgtg aaaatccggg ctggcagttc
    28081 tctattcccg atacacggat cacgatggac ggcaaaccct ggccgagcgg agcattgacg
    28141 ctggcctgga taccggaaca ggacgttggc ggcaaagaca ataaacgcag tgacgaactc
    28201 cggattcgcg ccagtaatct ggagctggca ggcctggagg gcatacgccc gctggccgcg
    28261 aaactttcac ctgcactggg tgatgtttgg cgctccacac aaccgagcgg caagattaac
    28321 actctggcgc tggatatccc gcttcaggcg gcagacaaga cccgttttca ggcatcgtgg
    28381 agcgatctgg cctggaagca atggaaatta ttaccgggtg cggaacactt ctccgggacg
    28441 ctttccggca gcgttgaaaa tggtttgttt accgcgtcga tgaagcaggc aaagatgcct
    28501 tacgaaacgg tattccgtgc gccactggaa atcgccgacg gccaggcaac tataagctgg
    28561 ctgaacaatg acaaaggttt ccagctggat gggcgtaata ttgacgttaa agccaaagcc
    28621 gtccatgcgc gcggcggttt tcgttacctg caacctgcta acgatgaacc ctggctgggt
    28681 attctggctg gcatcagtac cgatgatggt tcacaagcct ggcgctattt cccggaaaac
    28741 ttgatgggta aagacctggt tgattactta agtggcgcga ttcagggcgg tgaagcggat
    28801 aacgcgacgc tggtttatgg tggcaatccg caactcttcc cctataaaca caacgaaggt
    28861 cagtttgaag tgctggtgcc gctgcgcaac gcgaagtttg ccttccagcc ggactggcct
    28921 gcattaacta accttgatat tgaactggac tttattaacg acggtttatg gatgaaaacc
    28981 gatggcgtta atctgggcgg cgtgcgcgcg agtaatctca ccgcagtgat ccctgactac
    29041 tcgaaagaaa aactgctgat tgacgctgac attaaaggtc agggtaaagc cgttggccct
    29101 tactttgatg agacaccgct gaaagattct ctgggtgcga ccctgcaaga actccagctc
    29161 gacggcgatg tgaatgctcg cttacatctt gatatcccgc tgaacggcga gctggtaacc
    29221 gcgaaaggtg aagtgacgct gcgtaataac agtctgttta tcaaaccact cgacagcacc
    29281 ctgaaaaatt tgagcggtaa attcagcttt atcaatggcg atctgcaaag tgaaccactg
    29341 acagcaagct ggtttaatca gccgttgaac gtggattttt ccaccaaaga aggggcaaaa
    29401 gcctaccagg tagcggtaaa cctcaacggt aactggcaac cggcgaaaac cggcgttctg
    29461 cctgaagcgg tgaacgaagc attgagtggc atcgtggcgt gggatggtaa agtgggcatt
    29521 gatctgcctt atcatgctgg cgcgacctat aacgtagagc tgaacggcga tctgaataat
    29581 gtgagcagtc acttaccttc accgttagcc aaacctgcgg gggaaccact agcggtaaac
    29641 gttaaggttg atggcaatct caacagcttt gaattaaccg gacaggctgg tgtggataat
    29701 catttcaata gccgctggtt gcttggtcaa aagctgacgc tcgatcgtgc tatttgggcg
    29761 gcagacagta aaacgctccc gccgttgccg gaacaaagtg gcgttgaact caatatgccg
    29821 ccgatgaatg gtgccgagtg gctggccctg ttccagaaag gcgctgcgga gagtgtcggt
    29881 ggtgcagcgc gtttcccaca acacataacg ttacgtacgc ctatgttgtc actgggaaat
    29941 cagcaatgga ataacctgag tattgtttcg caaccgacgg caaatggcac cctggttgag
    30001 gcgcaggggc gtgaaatcaa tgccacgctg gcgatgcgta ataacgcgcc gtggctggcg
    30061 aatatcaaat atctttatta caacccgagc gtggcgaaaa ctcgtggtga ttcaacgccg
    30121 tcatcacctt tcccgacaac ggagcgcatt aacttccgtg gctggccgga cgcccaaata
    30181 cgatgcgcag agtgctggtt ctgggggcaa aaattcggtc gcattgacag tgatctcacc
    30241 atttctggcg atacattaac gctgaccaat ggactgattg atactggttt ctcgcggctt
    30301 actgctgatg gtgaatgggt taataatccg gggaatgaac gtacctcgct gaaaggaaaa
    30361 ctgcgcgggc agaaaattga tgccgccgca gaattttttg gtgtcacgac gcccatacgg
    30421 cagtcgtcat ttaatgtgga ttacgattta cactggcgta aagcaccgtg gcagccagat
    30481 gaggcgacgt tgaatggcat cattcatact caactgggta aaggcgaaat taccgaaatc
    30541 aataccggac atgccgggca attgctgcgc ttattgagcg ttgatgccct gatgcgtaag
    30601 ctgcgttttg atttcagaga cacctttggt gaagggttct attttgactc cattcgcagc
    30661 accgcgtgga ttaaagacgg cgttatgcac accgacgaca cgctggtgga tggcctggaa
    30721 gcggacatcg ctatgaaagg gtcggtaaat ctggtacgtc gcgacctgaa tatggaagcg
    30781 gttgttgcac cagagatttc tgcgacggtg ggcgtggctg cggcttttgc ggttaacccc
    30841 attgttggcg cggcagtgtt tgccgccagt aaagtgctgg ggccgctgtg gagcaaagtc
    30901 tccattttgc gctatcacat ttcgggtccg ctggacgatc cgcaaatcaa cgaagtgttg
    30961 cgccaaccgc gtaaagaaaa agcgcaatga tttgacgagg gcgcgtaatt gccccaatct
    31021 cataggataa tcgttgccaa aggccaacga gccagaacat aaccgtaggt cggatagggc
    31081 gttcacgccg catccggcag ccgtaaaaaa tcctctactg cagtaactaa cgagtagcaa
    31141 aaacgatgag tctgaacctg gtaagtgaac aattgctagc ggcgaacggc ctgaaacatc
    31201 aggacttgtt cgcgatcctc ggtcaactgg ccgaacgtcg ccttgattat ggcgatctct
    31261 attttcagtc gagctatcac gaatcctggg ttttagaaga ccgcattatt aaagatggtt
    31321 cttacaacat cgatcagggc gttggcgtgc gtgcaatcag cggtgaaaaa accggatttg
    31381 cttacgctga ccaaatcagc ctgctggcgc tggaacagag tgcgcaagcg gcgcgcacca
    31441 tcgtccgtga tagtggtgat ggcaaagtac agacgctggg cgcggtagag catagcccgt
    31501 tgtatacctc ggtagatccg ctgcaaagca tgagccgtga agagaagctg gatatcctgc
    31561 gtcgcgtcga taaggttgct cgcgaagcgg acaagcgcgt acaggaagtg actgccagcc
    31621 tcagtggtgt ctatgaatta attctggttg cggccaccga cggcacgcta gcggcggatg
    31681 tccgtccgct ggtgcgtctt tccgtgagcg ttctggtcga agaagatggc aaacgcgaac
    31741 gcggtgccag tggcggcggc ggtcgttttg gttatgagtt cttccttgcc gatcttgacg
    31801 gcgaagtccg tgcggatgca tgggcaaaag aagcagtgcg tatggcgctg gtcaatcttt
    31861 ctgccgttgc tgcaccagcg ggcaccatgc cggtagtact tggcgcaggt tggccgggcg
    31921 tgctgttgca tgaagcggta ggtcacggtc tggaaggcga cttcaaccgc cgtggcactt
    31981 cagtatttag tggacaggtc ggggagctgg tggcttctga actgtgtacc gtggttgatg
    32041 acggcacgat ggtcgatcgc cgtggttcgg tggcgattga tgacgaaggt acgccaggcc
    32101 agtacaacgt gctgattgag aacggcattc tgaaaggcta tatgcaggat aaactcaacg
    32161 cgcgtttgat ggggatgacg ccgactggca acggtcgccg tgaatcctac gcccatctgc
    32221 ccatgccgcg tatgaccaac acctatatgc tgccgggtaa atcgaccccg caggaaatta
    32281 ttgaatccgt tgagtacggt atctatgcac cgaactttgg tggcggtcag gtggatatca
    32341 cctccggcaa attcgttttc tccacttcag aagcatatct gattgaaaac ggtaaagtaa
    32401 cgaagccggt gaaaggcgca acgttgattg gttccggtat cgaaaccatg cagcagattt
    32461 cgatggttgg caacgacctg aaactggata acggcgtggg tgtctgcggt aaagaagggc
    32521 aaagtttgcc ggttggtgtg ggccagccaa cgttgaaagt cgataacctg actgttggcg
    32581 gtactgcgta ataatttcat tattttcaga aggataatta atctttctac gtgcacgaac
    32641 ggtcccctcg ctcctctggg gttagggtga ggggaacccg ttggcacagg tttgtacaac
    32701 gtaacagtac aatatgaatt acttctcttt cccgcgcccg tgcatctcct gaaacaattt
    32761 accgacctca acaaaataat ccgtcagcga gttgatcacg acctgtacct tcagcggcag
    32821 cttatctttt tcggtatata acgcataaac cgggcgtgga tctgactgat aacgcggcag
    32881 caggatctcc agctccccac gattgatctc gttgatcacc cacatcagcg gcacgtaggc
    32941 gatcccggca cccgccgtta gccagcgcac cagcgtcatc ggatcattag tcacaaatct
    33001 cccttgcggg atcgggcgag tcgagatccc ttccggtgcg atcagttcaa attcattgtc
    33061 gggccgcacg ctgtattcaa gccatgaatg gctacttaaa tcggcgggtt tttccggtat
    33121 gccgtattgt gtgagatagc ttttcgcggc gcacaccacc attggcatcg cgccaagatg
    33181 gcgggaaaac aggctggaat cctgcaacgc gccgacgcgg atcaccacat ccagaccgtc
    33241 ggcaatcagg tcgggggctg gaattccggt aaccagattg acgctcaaac ctgggtattc
    33301 tttcagcatt tttgctgtca gcccggcgag aacattttgt gccatagttg aagaacagcc
    33361 aatgcgcagc gtcccgatgg gggtgttatt gaaggcatac agttgctcat gaacatcctg
    33421 cacttcatga agcatccgac ggcagccctg gtagtaaatt ctgccggctt cggtcaggcc
    33481 aatgctgcgt gtgctacggt ttaacagctt tacctgcaac tcatcttcca gttttgacac
    33541 cgtctgactg atggacgaaa cgctcatctg tagctgtctg gcggcggcgg taaaagagcc
    33601 aaattcaact actttggcaa acaccgacat gcgttttagt cgttccatta ttcactctga
    33661 cttaaaagtg atttagatca cataatatag ataacagcat aacagttacg ctaatatatt
    33721 aaatatcaat ctacagcaat gttgctctcg cccggctttc catgcccttc tctgcggcga
    33781 cagatgctga aaataataac gcctgctctc tctatacaac caaggtcaac atgagtctgt
    33841 ttcccgttat cgtggtgttt gggctgtcct tcccaccgat attttttgaa ttgcttttat
    33901 cactggcgat tttctggctg gtgcgccggg tacttgtgcc aacaggtatc tacgactttg
    33961 tctggcatcc ggcgttgttc aacaccgcgc tctattgctg cttgttttat ttgatatcgc
    34021 gactgttcgt ttgaggttga agtga
//
LOCUS       DAJVTL010000031        33985 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.031, whole genome shotgun sequence.
ACCESSION   DAJVTL010000031 DAJVTL010000000
VERSION     DAJVTL010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33985
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.031"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(208..753)
                     /gene="hemG"
                     /locus_tag="OQQ26_001440"
     CDS             complement(208..753)
                     /gene="hemG"
                     /locus_tag="OQQ26_001440"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HCS1856935.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQ
                     WENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTN
                     SYARKFLMNSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTD
                     WEQVANFAREIAHLTDKPTLK"
     gene            complement(765..2216)
                     /gene="trkH"
                     /locus_tag="OQQ26_001441"
     CDS             complement(765..2216)
                     /gene="trkH"
                     /locus_tag="OQQ26_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HCS1856936.1"
                     /translation="MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFF
                     VALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATI
                     AIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            complement(2255..2869)
                     /locus_tag="OQQ26_001442"
     CDS             complement(2255..2869)
                     /locus_tag="OQQ26_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312803.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HCS1856937.1"
                     /translation="MESWLIPAAPVTVVEEIKKSRFITLLAHTDGVEAAKAFVESVRA
                     EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDG
                     KIINSDYQAFVLLRVALPAAKVAEFPAKLADFSRGSLQLLAIEE"
     gene            complement(2869..4200)
                     /gene="pepQ"
                     /locus_tag="OQQ26_001443"
     CDS             complement(2869..4200)
                     /gene="pepQ"
                     /locus_tag="OQQ26_001443"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HCS1856938.1"
                     /translation="MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     DVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRS
                     FTTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIV
                     ALNEHAAVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKD
                     VNDEQLALIATMKAGVSYVDYHLQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIES
                     LLAPWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVENMTRDLKLA"
     gene            4390..6579
                     /gene="fadB"
                     /locus_tag="OQQ26_001444"
     CDS             4390..6579
                     /gene="fadB"
                     /locus_tag="OQQ26_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
                     /protein_id="HCS1856939.1"
                     /translation="MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIG
                     VLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLP
                     VPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGA
                     DSALEIIAAGKDVGADQALKIGLVDGVVKAEKLIEGAMAILRQAINGDLDWKSKRQPK
                     LEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKS
                     FVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGVAYQSAW
                     KGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDR
                     VDVVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMH
                     FFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFA
                     GFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQK
                     DYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSE
                     EEIIARMMIPMVNEVVRCLEEGIIATLAEADMALVYGLGFPPFHGGAFRWLDTLGSAK
                     YLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA"
     gene            6589..7752
                     /gene="fadA"
                     /locus_tag="OQQ26_001445"
     CDS             6589..7752
                     /gene="fadA"
                     /locus_tag="OQQ26_001445"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HCS1856940.1"
                     /translation="MEQVVIVDAIRTPMVRSKGGAFRNVRAEDLSAHLMRSLLARNPA
                     LEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGI
                     SREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCD
                     PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLLNLMEHKDVQFGLATMCIGLGQGIATVFERV"
     gene            complement(7943..8644)
                     /gene="fre"
                     /locus_tag="OQQ26_001446"
     CDS             complement(7943..8644)
                     /gene="fre"
                     /locus_tag="OQQ26_001446"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HCS1856941.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDE
                     ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHP
                     GLQVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSER
                     NAREDRLFGDAFAFI"
     gene            complement(8690..10183)
                     /gene="ubiD"
                     /locus_tag="OQQ26_001447"
     CDS             complement(8690..10183)
                     /gene="ubiD"
                     /locus_tag="OQQ26_001447"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HCS1856942.1"
                     /translation="MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYSMPLLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGY
                     IDPGEMAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA"
     gene            10350..10838
                     /gene="rfaH"
                     /locus_tag="OQQ26_001448"
     CDS             10350..10838
                     /gene="rfaH"
                     /locus_tag="OQQ26_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HCS1856943.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRT
                     AVSEPLFPNYLFVEFDPEVIHTTTISATRGVSHFVRFGASPAIVPSAVIHQLSVYKPK
                     DIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
                     KL"
     gene            complement(10835..11617)
                     /gene="tatD"
                     /locus_tag="OQQ26_001449"
     CDS             complement(10835..11617)
                     /gene="tatD"
                     /locus_tag="OQQ26_001449"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HCS1856944.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQ
                     AQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFST
                     PEEQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREE
                     MQACVARGIYIGITGWVCDERRGLELRELLPLIPAAKLLIETDAPYLLPRDLTPKPSS
                     RRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF"
     gene            complement(11659..12435)
                     /gene="tatC"
                     /locus_tag="OQQ26_001450"
     CDS             complement(11659..12435)
                     /gene="tatC"
                     /locus_tag="OQQ26_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HCS1856945.1"
                     /translation="MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHL
                     VSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE"
     gene            complement(12438..12953)
                     /gene="tatB"
                     /locus_tag="OQQ26_001451"
     CDS             complement(12438..12953)
                     /gene="tatB"
                     /locus_tag="OQQ26_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HCS1856946.1"
                     /translation="MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLAT
                     TVQNELTQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPE
                     KASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKT
                     AAPSPSSSDKP"
     gene            complement(12957..13226)
                     /gene="tatA"
                     /locus_tag="OQQ26_001452"
     CDS             complement(12957..13226)
                     /gene="tatA"
                     /locus_tag="OQQ26_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HCS1856947.1"
                     /translation="MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDEPKQDKTSQDTDFTAKTIADKQADTNQEQAKTEDAKRHDKEQV"
     gene            complement(13305..14945)
                     /gene="ubiB"
                     /locus_tag="OQQ26_001453"
     CDS             complement(13305..14945)
                     /gene="ubiB"
                     /locus_tag="OQQ26_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HCS1856948.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWM
                     PNRHKDKPLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDG
                     KLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVTTLEKNGTNMKLLAERGVQVFF
                     TQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAF
                     KEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGAT
                     LVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR"
     gene            complement(14942..15547)
                     /gene="ubiJ"
                     /locus_tag="OQQ26_001454"
     CDS             complement(14942..15547)
                     /gene="ubiJ"
                     /locus_tag="OQQ26_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HCS1856949.1"
                     /translation="MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGF
                     STSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLAALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEA
                     ITEEWRMAPGPLEVAWFAEETAAVECAVDALTKRLEKLEAK"
     gene            complement(15561..16316)
                     /gene="ubiE"
                     /locus_tag="OQQ26_001455"
     CDS             complement(15561..16316)
                     /gene="ubiE"
                     /locus_tag="OQQ26_001455"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HCS1856950.1"
                     /translation="MVDKLQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            complement(16411..17838)
                     /gene="rmuC"
                     /locus_tag="OQQ26_001456"
     CDS             complement(16411..17838)
                     /gene="rmuC"
                     /locus_tag="OQQ26_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HCS1856951.1"
                     /translation="MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAE
                     LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR
                     QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF
                     GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG
                     LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR
                     ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE
                     ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI
                     GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY
                     RLRSVPEQPNDEAYQRDDEYNQQSR"
     gene            complement(17979..18740)
                     /gene="udp"
                     /locus_tag="OQQ26_001457"
     CDS             complement(17979..18740)
                     /gene="udp"
                     /locus_tag="OQQ26_001457"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HCS1856952.1"
                     /translation="MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKL
                     ASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATAHVGVTASSD
                     TFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESQAVKIVVEAARRLL"
     gene            19002..19814
                     /locus_tag="OQQ26_001458"
     CDS             19002..19814
                     /locus_tag="OQQ26_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HCS1856953.1"
                     /translation="MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPA
                     YHARPKQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHN
                     PQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
                     LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS"
     gene            20332..21300
                     /gene="hcp"
                     /locus_tag="OQQ26_001459"
     CDS             20332..21300
                     /gene="hcp"
                     /locus_tag="OQQ26_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000546097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HCS1856954.1"
                     /translation="MHGLSFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGRWEK
                     YYNIQLRGALLSAINHLFTENNLDTEAITVSYEYILIANTEFSYWAFPDNYNRLFIPR
                     PKTKAGNGFKTLNSKAVGRLLAAVGIYNGNIEGFRETADKLGGDAPAGYDQFMDNKGL
                     LIAGASIVAGAVLGRMRLPDLESLEHFGARGAVSGRPFNPDLAGGPIENWTTDGVTIN
                     REGIAIVEKHIARFGHDPVNEVMINRLKDIEKRKIPPEQVDLNFYTHECREYQRYCNL
                     GWETGQPDGDAGYALWNHTHTATLEDYKLKGELNDLYHQDALDYDN"
     gene            21290..21535
                     /locus_tag="OQQ26_001460"
     CDS             21290..21535
                     /locus_tag="OQQ26_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCS1856955.1"
                     /translation="MITETEINVLKVMAEKDINWNWMNLDRTLSIRQIPGFGNVVNIV
                     NKLANEGLVIIEDSGHRSMPHYHVTEKGYNFVKSENK"
     gene            complement(21820..24081)
                     /gene="metE"
                     /locus_tag="OQQ26_001461"
     CDS             complement(21820..24081)
                     /gene="metE"
                     /locus_tag="OQQ26_001461"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HCS1856956.1"
                     /translation="MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELR
                     ARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPV
                     LLGPVTYLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELP
                     QAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAEL
                     HKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSV
                     ETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAV
                     EKRLAAITAQDSQRASVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKG
                     NLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDVYLQWGVEA
                     FRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAAL
                     ANMVQAAQNLRRG"
     gene            24199..25152
                     /gene="metR"
                     /locus_tag="OQQ26_001462"
     CDS             24199..25152
                     /gene="metR"
                     /locus_tag="OQQ26_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HCS1856957.1"
                     /translation="MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFHKNWPQVEMDFKSGVTFNPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     YEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQP
                     ITEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL"
     gene            complement(25040..25939)
                     /gene="bioP"
                     /locus_tag="OQQ26_001463"
     CDS             complement(25040..25939)
                     /gene="bioP"
                     /locus_tag="OQQ26_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter"
                     /protein_id="HCS1856958.1"
                     /translation="MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFL
                     PFLRTRGNSLKTVGLYMLVGVMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIY
                     DIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVH
                     RKWVAPRSSQTADDRRRDCALSE"
     gene            complement(26015..26815)
                     /gene="yigL"
                     /locus_tag="OQQ26_001464"
     CDS             complement(26015..26815)
                     /gene="yigL"
                     /locus_tag="OQQ26_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HCS1856959.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDII
                     TNVYRDDEWFMNRHRPEEMRFFKEAVFKYALYEPGLLESEGVSKVFFTCDSHEQLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMND
                     AEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS"
     gene            complement(26823..27845)
                     /gene="pldB"
                     /locus_tag="OQQ26_001465"
     CDS             complement(26823..27845)
                     /gene="pldB"
                     /locus_tag="OQQ26_001465"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HCS1856960.1"
                     /translation="MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVR
                     FVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
                     HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIA
                     LTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRY
                     RRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNR
                     MHDRFCELRTAVGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSG
                     NRSTEV"
     gene            27956..28567
                     /gene="rhtB"
                     /locus_tag="OQQ26_001466"
     CDS             27956..28567
                     /gene="rhtB"
                     /locus_tag="OQQ26_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HCS1856961.1"
                     /translation="MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIA
                     GLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSL
                     DSTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQLMQYIVLGVTTIVVDIIVMI
                     GYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA"
     gene            complement(28629..29249)
                     /gene="rhtC"
                     /locus_tag="OQQ26_001467"
     CDS             complement(28629..29249)
                     /gene="rhtC"
                     /locus_tag="OQQ26_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709629.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine export protein RhtC"
                     /protein_id="HCS1856962.1"
                     /translation="MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAP
                     APQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTERWGIFALIIVET
                     LAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(29313..31142)
                     /gene="recQ"
                     /locus_tag="OQQ26_001468"
     CDS             complement(29313..31142)
                     /gene="recQ"
                     /locus_tag="OQQ26_001468"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HCS1856963.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCL
                     VVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTRE
                     QQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDY
                     GHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSL
                     QLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEM
                     AEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE"
     gene            complement(31275..32144)
                     /gene="pldA"
                     /locus_tag="OQQ26_001469"
     CDS             complement(31275..32144)
                     /gene="pldA"
                     /locus_tag="OQQ26_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HCS1856964.1"
                     /translation="MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQ
                     EHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLK
                     IGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDLF"
     gene            32309..32776
                     /locus_tag="OQQ26_001470"
     CDS             32309..32776
                     /locus_tag="OQQ26_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312777.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HCS1856965.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAF
                     KNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG"
     gene            32828..33718
                     /gene="rarD"
                     /locus_tag="OQQ26_001471"
     CDS             32828..33718
                     /gene="rarD"
                     /locus_tag="OQQ26_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HCS1856966.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIA
                     AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGAYKMVTFTFI
                     WVALAIFVMDAIYTQRRTSK"
     gene            33777..>33985
                     /locus_tag="OQQ26_001472"
     CDS             33777..>33985
                     /locus_tag="OQQ26_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709624.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1856967.1"
                     /translation="MLTGDSHKDVKFMLRMFIPTSNGKISRRRYIFSFILINFIFAFL
                     IIFFNDGEAGFLVIVSTIALHYLVI"
BASE COUNT         8303 a         9103 c         8539 g         8040 t
ORIGIN      
        1 gcggggtgtg cataatacac tttcccgcta cagagtcaag catttatttt tgctttctct
       61 gccggaattc tcaggagaac cccgctgacc cggcggcgtg tttgccgttg ttccgtgtca
      121 gtggtggcgc attataggga gttattccgg cctgacaaga ggaaatttaa aataattttc
      181 tgatcgcgca ttttttattc tttatgctta tttcagcgtc ggtttgtcgg ttaaatgggc
      241 gatttctcgg gcgaaattcg ccacctgctc ccaatcggta tagacaactt ctttgcgcgt
      301 atccgtttca ccgcctgaca tcttcataat cagcttgatc ataaaacggt cgtaccagcg
      361 ataacgtggg taacgcagcg ccccagcaat gaccgcgcag cgatcgggac gccattgcga
      421 gttcatcaga aacttccgcg cgtagctgtt ggtctgtgga gtacgcttct ccggtttgcg
      481 cgccaccagg tttacggaat aaaaggcgct cggcatcgaa ttcagtcgcg tcgcatgctt
      541 tttgacaaat tcctggaacg cagagtggta gtgaccatag cgaatagaag caccaatgac
      601 cacacggtca tagttttccc attgtggttc ttcaatgcgg tgcacattgg caacatccgc
      661 ctggatcccc agttctttca gttccgaagc caggtaggag gcaatctcgc gcgtttgtcc
      721 gtcccttgtt gagaaaagaa ttaatgtttt cacgtattac tccatcattc acgccagaaa
      781 gtcggggtaa agagcaccag caatgtaaag acctcgagac gaccaaacag catgttggca
      841 atcaggatcc atttagccac cgggttcata ctggtaaagt tatcagcaac cacgccaagc
      901 cctggcccca ggttattcaa tgtcgcaaca accgaggcaa aggcagaaaa gtcatccacg
      961 cccgtggcga taatcgccag catactgaca ataaacacca atgcataggc ggagaaaaat
     1021 ccccaaacgg cttcgaggat acgttccggc agtgcgcgat tccccagctt aatgctatag
     1081 acggcgttcg gatgcaccag tcgtttcagc tcacggttcc cctgcttaaa cagcagcagg
     1141 atgcggatca ctttcaagcc accgcccgtt gacccggcac aaccgccgat aaaagctgaa
     1201 cataaaagca gtaccggcaa aaagagcggc cagcgtgcaa tgctgtcagt tgtaaacccg
     1261 gcggttgtcg ccatcgacac cacctggaaa aacgcctggt taattgtcat cagcgccgaa
     1321 ctgtagacat tatgaaacca cagtacgagg gtacaaataa ccaccagcgt aaactgtacg
     1381 ccgataaaca tgcgaaattc cggatcgcgc caataaacct tcagactacg cccacttaac
     1441 agtgaaaagt gcagaccgta gttacagccg gagatcagca ggaagatagc aatgatagtg
     1501 ttaatagtcg ggctgtcgaa ataaccgata ctggcatcat gtgtcgagaa gccgccaata
     1561 gcgatagtcg caaagctatg gccgatggca tcaaaggcat ccattccggc aaaccacaac
     1621 gccagcgcac aggcgacggt cagcaagaca taaatcaacc acagggtttt cgccgtttcc
     1681 gcaattcgcg ggcgcatttt gttatctttc agcgggccgg gcatttctgc gcgatagagc
     1741 tgcatcccac ccacgccgag gataggcagt atcgcaaccg ctaacacgat gatccccatc
     1801 ccgccaaacc attgcagcat ctggcgataa aagaggatgg catgagggag cgaatccagc
     1861 cccaccagcg tagtggcccc ggtggtggtc aggccagaga aagattcaaa aaacgcatcg
     1921 gtaatcgtga ggttcgggct ttccgagaag ataaaaggga gcgcaccgac actacccagc
     1981 acggtccaga acagcaccac tatcagaaac ccctcacggg atttcagttc gcccttctct
     2041 ttgcggttcg gccaccacag catagagcca atggcgaggg cgacaaaaaa ggtctgggta
     2101 aaagcgcggc ccgctccatc ccggtagatg agtgctacca gcccagggat aatcatggtc
     2161 cctgaaaata agatgaccag tagtccaacg attcgggtaa tggcgcgaaa atgcatctct
     2221 gccgcttcct tagttctgca aaacgaagtg gggattattc ttcaatcgct aacaattgca
     2281 atgaaccacg gctaaaatcc gccagctttg cgggaaattc agccactttc gctgccggaa
     2341 gcgccacccg cagcagaacg aatgcctgat aatcactgtt gataattttg ccgtcacact
     2401 gccccagcaa cgcttcaatg ccggttaact gactatattc acattgcaaa gtatattcgg
     2461 ttaatggcgt cttgcgttgg gtcgttagct ggcgcagcgc ctgattcacg ccgccgccat
     2521 acgctttcac taacccaccg gtgccaagca atatgccgcc gtagtagcgc actaccacag
     2581 cggtaatttc cccgacgccg ctgcccatta gctgggcgag catcggttta cctgccgttc
     2641 ccgccggctc cccgtcgtca gagaaaccca gctgttgaga atcatccggc gcacccgcca
     2701 cccacgccac gcaatggtgg cgggcatcgg ggtgttctgc ccgtaccgat tcaacaaacg
     2761 ctttcgccgc ctcaacgcca tcggtatgcg ccaacagtgt tatgaagcgg ctctttttga
     2821 tctcttcaac gaccgtgacc ggtgccgcag gaattaacca gctttccatc acgccagttt
     2881 cagatcccgg gtcatatttt ccacgttatt ttcgtggatc accacgttgt cttcgatacg
     2941 aatgccgccg aacggtttca gtgcttcaat tttctgccag ttgaagtgct tgctgaactg
     3001 cccttcacgc cacggtgcca gcagcgattc gatgaagtag atacccggtt cgatggttaa
     3061 caccatgccc ggctggagaa tacgggtgca gcgcaggtac ggatattttg ccggtgccgc
     3121 gaggtgtgta ccgctatcat cctgcataaa accggctacg tcatgcacct gcaggcccag
     3181 cggatggccg ataccgtgcg gcataaacgg tcctgtgaga tcgttttcga ccatcgcttc
     3241 ttcactcata tcggtgatga tttgatgttt acgcagcagt ttggcgatgc gctgatggaa
     3301 ctggaggtgg taatccacat agctgacgcc tgctttcatg gtagcgatca gcgccagttg
     3361 ttcatcattt acgtctttca ccagctgtgc gtagtcgttg tcgctttttg ccgaccaggt
     3421 acgggtcagg tcagccgcat agccgttata ttcggccccg gcatccagca ggaagctgcg
     3481 catctcttcc ggtgcctggt ggtccagttt ggtgtaatgc aacaccgcag cgtgttcgtt
     3541 gagcgccaca atgttgctgt aaggtacgtc ggtatcacga tgaccggtcg cggtcagata
     3601 ggcaatgttg atatcgaact cgctcatgcc agaacggaac gcttcttctg ccgcgcgatg
     3661 accgttgacc gccattttct gcgcttcacg catacaggcc agttcgtact cggttgtgaa
     3721 ggagcgatag taatgcaggt agtcgatcac ccctttcggg ttgatgttgc tggcctcaat
     3781 acccagttgc agcgcacgtt ccggcaccgg accgatataa ccgatattgc cgcgcgcagc
     3841 aggcagcagg ctaccaatgc catcggcttt cggcagcgcg atcacttcca catcctcagt
     3901 ccagaaggag gtcggcaaag gttcgacgtt gtgccagtaa tcaaccggca gataaaacca
     3961 cagtttcggc ttattcacgc catccaccag caaccagcag tttggcacct gggttaccgg
     4021 cacccacgct ttaaattgcg ggttcacttt aaacggatag ggatgatcgt cgagaaaaac
     4081 gttgaacagt tcgccggagt gaataagtaa cgcatccagc ttgaagcgcg ccagcgcatc
     4141 gcgagtccgt tcctgtaagg tagctatatg atttttatag agtgaggcca gtgactccat
     4201 tttttaccct tctgtttttt tgaccttaag tctccgcatc ttagcacatc gttcatccag
     4261 agcgtgattt ctgccaagcg tgatcagatc ggcatttatt taatctttta tttgtatatt
     4321 tttaacacaa aatacacact tcgactcatc tggtacgacc agatcacctt gcggattcag
     4381 gagactgaca tgctttacaa aggcgacacc ctgtaccttg actggctgga agatggcatt
     4441 gccgaactgg tatttgatgc cccaggttca gttaataaac tcgacactgc gaccgtcgcc
     4501 agcctcggcg aggccatcgg cgtgctggag cagcaatcag atctaaaagg gctgctgctg
     4561 cgttcgaaca aagcagcctt tatcgtcggt gctgatatca ccgaattttt gtccctgttc
     4621 ctcgttcctg aagaacagtt aagccagtgg ctgcattttg ccaatagcgt gtttaatcgc
     4681 ctggaagatc tgccggtgcc aaccattgct gccgtcaacg gctatgcgct gggcggtggc
     4741 tgcgaatgcg tgctggcgac cgattatcgt ctggcgacgc cggatctgcg catcggtctg
     4801 ccggaaacca aactgggcat catgccgggc tttggcggtt ctgtacgtat gccacgtatg
     4861 ctgggcgctg acagtgcgct ggaaatcatt gccgccggta aagatgtcgg cgcggatcag
     4921 gcgctgaaaa tcggtctggt ggatggggta gtcaaagcag aaaaactgat tgaaggggcg
     4981 atggcgattt tacgccaggc cattaacggc gacctcgact ggaaatcaaa acgtcagccg
     5041 aagctggaac cgctaaaact gagcaagatt gaagccacca tgagcttcac catcgctaaa
     5101 gggatggtcg cacaaacagc ggggaaacat tatccggccc ccatcaccgc agtaaaaacc
     5161 attgaagctg cggcccgttt tggtcgtgaa gaagccttaa acctggaaaa caaaagtttt
     5221 gtcccgctgg cgcataccaa cgaagcccgc gcgctggtcg gcattttcct taacgatcaa
     5281 tatgtaaaag gcaaagcgaa gaaacttacc aaagacgttg aaaccccgaa acaggccgct
     5341 gtactgggcg caggcatcat gggtggcggc gtcgcttacc agtctgcgtg gaaaggcgta
     5401 ccggttgtca tgaaagatat caacgacaag tcgttaaccc tcggcatgac cgaagccgcg
     5461 aaactgctga acaagcagct tgagcgcggc aagatcgatg gtctgaaact ggctggcgtg
     5521 atctctacaa tccacccaac gctcgactac gccgggtttg accgcgtgga tgttgtggta
     5581 gaagcggttg tcgaaaaccc gaaagtgaaa aaagccgtgc tggcagaaac cgagcaaaaa
     5641 gtacgcccgg ataccgtgct ggcgtctaac acttcaacca ttcctatcag cgagctggcc
     5701 aacgcgctgg aacgtccgga aaacttctgc gggatgcact tctttaaccc ggtccaccgg
     5761 atgccgttgg tggaaattat tcgcggcgag aaaagctccg acgaaaccat cgcgaaagtc
     5821 gtcgcctggg cgagcaagat gggtaaaacg ccgattgtgg ttaacgactg ccccggtttc
     5881 ttcgtcaacc gcgtgctgtt cccgtatttc gccggtttca gccagttgct gcgcgacggc
     5941 gcggatttcc gcaagatcga taaagtgatg gaaaaacagt ttggctggcc gatgggtccg
     6001 gcatacctgc tggacgttgt gggcattgac accgcgcatc acgcccaggc agtcatggca
     6061 gcaggcttcc cgcagcggat gcagaaagat tatcgcgatg ccatcgacgc gctgtttgat
     6121 gccaaccgct ttggtcagaa gaacggcctc ggtttctggc gttataaaga agacagcaaa
     6181 ggtaagccga agaaagaaga agacgccgct gttgaagacc tgctggcaga agtgagccag
     6241 ccgaagcgcg atttcagcga agaggagatt atcgcccgca tgatgatccc gatggtcaac
     6301 gaagtggtgc gctgtctgga agaaggcatt atcgccactc tggcagaagc ggatatggcg
     6361 ctggtctacg gcctgggctt ccctccgttc cacggtggcg cgttccgctg gctggacacc
     6421 cttggtagcg caaaatacct cgatatggca cagcaatatc agcacctcgg cccgctgtat
     6481 gaagtgccgg aaggtttgcg taataaagcg cgtcataacg aaccgtacta tcctccggtt
     6541 gagccagccc gtccggttgg cgacctgaaa acggcttaag gagtcacaat ggaacaggtt
     6601 gtcattgtcg atgcaattcg caccccgatg gtccgttcga agggcggtgc ttttcgtaac
     6661 gtgcgggcag aagatctctc cgctcattta atgcgtagcc tgctggcgcg taacccggca
     6721 ctggaagcgg cggccctcga cgatatttac tggggttgtg tgcagcagac gctggagcaa
     6781 ggttttaata tcgcccgtaa cgcggcgctg ctggcagaag taccacactc tgtcccggcg
     6841 gttaccgtca atcgcttgtg tggttcatcc atgcaggcat tgcatgacgc agcacgtatg
     6901 atcatgactg gcgatgcgca ggcatgtctg gtcggcggcg tggagcatat gggccatgtg
     6961 ccaatgagcc acggtgtcga ttttcacccc ggcctgagcc gcaatgtcgc caaagcggcg
     7021 ggcatgatgg gcttaacagc agaaatgctg gcgcgtatgc acggtatcag ccgtgaaatg
     7081 caggatgcct ttgccgcgcg atcgcacgct cgtgcctggg ccgccacgca gtcgggcgca
     7141 tttaaaaatg aaatcatccc gaccggtggt cacgatgccg acggcgtcct gaagcagttt
     7201 aattacgacg aggtgattcg accggaaacc accgtggaag ccctcgccac gctgcgtccg
     7261 gcgtttgatc cagtaagcgg tacggtaacg gcgggtacat cttctgcact ttctgatggt
     7321 gccgctgcca tgctggtgat gagtgaaagc cgcgcccgtg aattaggtct taagccgcgc
     7381 gcccgtgtgc gttcgatggc ggtcgttggt tgtgatccgt cgattatggg ttacggcccg
     7441 gttcctgcct cgaagctggc gctgaaaaaa gcggggcttt ctgccagcga tatcggcgtg
     7501 tttgagatga atgaagcctt tgccgcgcag atcctgccat gtattaaaga tctgggactg
     7561 attgagcaga ttgacgagaa gatcaacctc aacggtggcg cgatcgcgct gggtcatccg
     7621 ctgggttgtt ccggtgcgcg tatcagcacc acgctgctga atctgatgga acacaaagac
     7681 gttcagtttg gtctggcgac gatgtgtatc ggtctgggtc agggtattgc gacggtgttt
     7741 gagcgggttt aaccacttgc cggatgcggc gtgaacgcct tatccggtct accgctccgg
     7801 caccaatgta ggcctgataa gacgcgccag cgtcgcatca ggcatcgtgc accaattgcc
     7861 ggatgcgaca tagatctaaa tgccactgaa taaagtttta gttgccgttc ttcccgcctg
     7921 tcaggggcgg gttttttata tctcagataa atgcaaacgc atcgccaaac aggcgatctt
     7981 cccgcgcatt acgctcactg caaaacaggt cacgggcaat tttcgccatc tcaaaacgtc
     8041 cggcaatata gatatcatgc tctgccagcg taccatgatc ctgcaatacc gccgttaaca
     8101 cggtaccagt acgcccacgc cagcctgctt ccggttgttc aaccaccggc accacttgca
     8161 gaccagggtg ctttaacgaa agcgcctcaa gctcgcagag atcatacaga tgctgctctt
     8221 cacgcccgcc ccagtaaatg gtgatatcac ggtttgggtt acgcgccaac gctgtcagca
     8281 aaatcgagcg ggcataagag aacccggtgc cgcccgcaat caaaatcatc ggacgctctt
     8341 catcatcgcg cagccacgct tctccgtggg gaatgtcgac cacgatttga tgatctttga
     8401 ggatgcggtc catgactgct ttcgcgtaaa ggttgatttc agaagcgcca atatgcagct
     8461 cgataaaccc tttttcatcc ggcgtcgagg ccattgagaa cggacgtttg tcgcgctcat
     8521 ccatcactac catcaaatac tgaccagcac gaaaagaaaa ggccgcgtct ggcacgatgc
     8581 ggacacgata tacggtatcc gtgatagctt ctaccgaggt cactttacag cttaaggttg
     8641 tcatgcgctt tctctgtcgg atcgataaat agggcaaaac aaacgcgcat caggcgcttt
     8701 taccgttgtt aaaaatagcc agttcatccc agatggcgtc aatatgcgcg acaacatctg
     8761 gatctttttt gatgggacgt ccccattcac gctgggtttc ccccggccat ttattcgtgg
     8821 catccagccc catttttgaa cccagcccgg agacaggcga ggcaaaatcc agataatcaa
     8881 taggcgtatt ttctaccaga acagtatccc gcgccgggtc catacgggtg gtaatcgccc
     8941 aaatcacatc gttccagtcg cgtgcgttga cgtcatcatc gcaaacgatc acaaatttag
     9001 tgtacataaa ctggcgtaag aacgaccaga cgcccatcat gacgcgcttc gcgtgtccgg
     9061 cgtactgttt tttgatcgtc actaccgcca gacgataaga acagccttcc ggcggcaggt
     9121 aaaaatcgac aatttccggg aactgttttt gcagaatcgg tacaaacact tcgttcaacg
     9181 ccacgcccag taccgcgggc tcatctggcg gacgcccggt ataggtggaa tggtaaatcg
     9241 catcttcacg ctgggtaata tgcgtcacgg taaacaccgg gaaactatcg acttcattat
     9301 agtaacctgt gtggtcacca tacggccctt ccggcgccat ctcaccagga tcgatatacc
     9361 cttccaggac gatttcggca ctggctggca cttcgaggtc attggaaata cactttacta
     9421 cttcggtttt ggtgccgcgt agcaatccgg caaacgcata ctctgaaagc gtatccggaa
     9481 cgggggtgac tgcaccgaga atcgtggcag gatcggcacc cagcgccaca gaaaccggga
     9541 aacgttcgcc cggatgcgcc gcacaccact cctgataatc cagcgcgccg ccgcgatgcg
     9601 acagccagcg cataatcagt ttgtttttac caatcagctg ctggcgataa atgcccagat
     9661 tctgccgctc tttatgcggg ccgcgcgtta cggtcagccc ccaggtaatc agcggcgcgg
     9721 catcttccgg ccagcaggtc ataatgggaa tgcgattgag atcgacgtca tcgccagaga
     9781 cgattttttg ttggcagggc gcaccacgca gtcgctttgt cggcatgttt aacacctgct
     9841 taaactgcgg cagtttatca aacaggtcgc ggaaaccttt tggcggctcc ggctctttca
     9901 gaaacgccaa taatttacca acttcacgca gcgccgaaac atcttcctgc cccatgccca
     9961 tcgccacgcg ctttggcgta ccgaacaggt tgcacagcag cggcattgag tagcctttag
    10021 ggttttcgaa caacagcgca ggcccaccag cacgcagagt gcggtcagca atttcagtga
    10081 tttccagatg cggatccacc gggagcgtga tacgttttag ctcaccctgc tgttcaagca
    10141 gcgtcaggaa gtcgcgtaaa tcgttatatt tcatggcgtc cattgtagcc tcttaatctg
    10201 cgcccattat acggcgttca tctttgcgat gctgtaaatt tgttaaatta gcgtgaactc
    10261 tgacggtata acgcaaaccg gggaatataa ttaacttagc gtaaagcttt tgctatcctt
    10321 gcgccccgat taaacggata agagtcatta tgcaatcctg gtatttactg tactgcaagc
    10381 gcgggcaact tcaacgtgcc caggaacacc ttgagagaca ggcggttaat tgcctcgctc
    10441 cgatgatcac cctggaaaaa atcgtacggg gtaaacgtac cgcagtcagt gaaccgttat
    10501 tccctaacta cctgtttgtg gaatttgatc cagaagtgat tcataccacg accatcagcg
    10561 ctacgcgtgg cgtcagccac tttgtgcgct ttggcgcgtc gccagcgata gtcccatcgg
    10621 cggtgattca tcagctatcg gtatataaac cgaaagacat tgtcgatccg gcaacccctt
    10681 atccgggtga taaggtgatt attaccgaag gcgcgttcga aggctttcag gccattttca
    10741 ccgaacccga tggtgaggct cgctccatgc tattgcttaa tcttattaat aaagagatta
    10801 agcacagtgt gaagaacacc gagttccgca aactctaaaa cgcaatccca aacagtgttt
    10861 tgacattggc atccgtggtg gcagccagcc atgcagcatc ttctccacgc cagtgcgcaa
    10921 tacgttgcaa aatatggggc agatgggctg gctcgttgcg ccgggatgat ggctttggcg
    10981 tgagatcgcg cgggagcaga tacggcgcat cagtttcgat cagcaatttc gccgccggaa
    11041 tcaacggcaa caattcccgc agctccagcc cgcgtcgttc atcgcaaacc caaccggtaa
    11101 tgccgatata aattccacgc gccacgcacg cctgcatctc ttcgcgtgtg ccggtaaagc
    11161 aatgaagaac cgcaccaggc agtttatcca gccacggctc cagcaatgtc ataaaccgct
    11221 cgtgggcatc gcgacagtgc ataaataccg gcatgtttaa ttctgcggca atgcgtagct
    11281 gagcaacaaa agcgcgttcc tgctcttccg gcgtcgaaaa gttgcggtta aagtcgagac
    11341 cacattcacc aatcgccacc acttctggct gcgcggccag ctcaataatc gcttcttcag
    11401 tcgcagcttg ccactggctg ctgtcgtgag gatgtacgcc cgccgttgac caacaggacg
    11461 aatactgacg cgccagcttt tgcgcctgct ggctttcacg caggttagtg ccggtgataa
    11521 gtagcccatt aactcccgcg tcaaaagcgc gcgctacaac atcatcacgg tctttcgcaa
    11581 attgcgaact ggtcaaatta acgccgatat caaacatcct gtactccata tgacaaccgc
    11641 cctgacgggc ggttgaattt attcttcagt tttttcgctt tctgcttcag cgtcgttttc
    11701 ctcttcccga tttcgccctt taccaacgta aaagcgtgag aagaagacac cgatttcaaa
    11761 cagacagtac atcgggatcg ccaatagcgt ttgcgagaag acatccggcg gcgtcagcaa
    11821 catcccgaca acgaatgcac caaccagcac atacgggcgt tttttgcgta agtcttctgg
    11881 cgaggtaatc cccatccagc acagcagcac aattgccacc ggcacttcaa aggagacacc
    11941 aaacgccata aacagcgcca taacgaagct taaatagctg gcgatgtcgg tggatacctg
    12001 caccccttcc ggcgcggtat tggcaaggaa gccaaatgcc agcggaaaga ccacaaagta
    12061 ggcgaatgcc atgccgatat aaaacagcag agagctggaa accagcagcg gcaccaccag
    12121 gcgacgttca tgcttataca gcgctggggc gataaatgcc cacacctgat agagaatcac
    12181 cggcgctgac agaatcagcg acaccataaa ggtcagctta atcggcgtaa agaacggcga
    12241 ggccacgtcg gtggcgatca tcgttgaacc ttgcggcaac tgcttgatca atggcgcgga
    12301 taccaggtga tagatgtcat tggcgaaata gaccagacac aggaatatca cgatcaccgc
    12361 gataatgcag ttcagcagac gcttacgcaa ctcaatcaga tgcgtgataa gcggttgagt
    12421 atcttctaca gacatgttta cggtttatca ctcgacgaag gggaaggtgc agcggttttc
    12481 ggttcagcgt ccgcagcagg ttttaccacc ggctctggcg tggtttctgg cttctgttcc
    12541 ggcgaactgg cctgcgtttg tgcagcggca ggcgttacgc cctcatgcgc agcttcatta
    12601 tctttcacca ccgggttatg gatggtgtgc gcttcatcgc tcgccttttc aggatcgttt
    12661 gcaacgtagg aacgcttcat cgactccgcg gcctggcgta gttcatccat cgacgctttc
    12721 agttcgggcg tcaggttagt gaggctcgcc ttttcaacct ttttcagact gtcctgaaac
    12781 tcctggagtt ttaactcctg ggtcagttcg ttctgcaccg ttgtcgccag tgaacgcaac
    12841 gcgcgaatcc agcccgctac cgtttttacc gccacaggca gtcgttgcgg ccccagaacg
    12901 acgaggccga tgatgaacac caatagcagt tcgctaaaac cgatatcaaa cacggattac
    12961 acctgctctt tatcgtggcg cttcgcgtct tctgttttag cctgttcctg attcgtatcc
    13021 gcctgcttat cggcgatagt tttcgcagta aaatcagtat cctgactggt tttatcctgc
    13081 tttggttcat catcgctcat tgctttttta aagcctttga tcgacgcacc aagatcggaa
    13141 ccgatggagc cgagcttttt ggtgccaaaa agcagtacaa cgatgacggc aataatcaat
    13201 aactgccaaa tactgatacc acccatacat gttcctctgt ggtagatgat gattaaacaa
    13261 agccgcatta tacgttacac ggcccgcctt gagcgatgaa aaaatcagcg tgttttgcgc
    13321 caaccgacaa accaggcgat cagaccacct gccattaacc agccgggcat cagcccccac
    13381 tcaggtcggc tgaccaacaa gaatgtgcca cttaatacta acgtagcgcc aattccgaga
    13441 aaataacgcg attgtccctg acgtacatga tttgactgaa gctcgcgggc aatcttatca
    13501 acactgtgct gtaaatactt gccctggcgc aaactgtcgt aaaccagttc aggcagttct
    13561 ggcatttttt cgacccagaa cggcgctttt tctttaaatg ctctcaccag ggcaggaata
    13621 ccgacctgat ctttaatcca cgactccagg aaaggcttcg ctgttttcca taaatcgagc
    13681 tgcggataaa gctggcgtcc taccccttcg acatagagca gggttttctg gagtaacacc
    13741 agttgcggct gcacttccat attgaagcga cgcgccgtat taaacagatt taacagtaca
    13801 tgtccaaacg aaatttcggc cagcggtttc tcaaagatag gttcacagac cgtacgaatg
    13861 gcaaattcga actcttcaac gttggtatct ggtggcaccc agccagaatc gacgtgtagc
    13921 tctgccactt tgcgatagtc gcgattaaag aaggcgataa agttttctgc cagatagcgt
    13981 ttatcttctt tgtttagcga gccaacaatc ccgcaatcaa tgccgatata tttcgggttt
    14041 tccgggtgtt catagcttac gaaaatgttg ccagggtgca tatcggcatg gaaaaagctg
    14101 tcgcgaaaga cctgagtgaa gaacacctgc acgccacgtt ccgccagcaa tttcatgttg
    14161 gtgccatttt tctccagcgt cgtaacatca gacaccggaa tgccgtaaat gcgctccatc
    14221 accatcatcc cttcactaca atagtcaggg taaacttccg ggatgtagag catcgggctg
    14281 tcttcaaaat ttcgccgaag ctgaatggcg ttggcagatt cccgcagcaa attcagttca
    14341 tcaatcaagg tcttttcgta ctcgcgcacc acttcggttg ggcgcagacg gcgaccatcc
    14401 ggcagcaaac gcggcaccca gcgagctaga cggtagataa gtttcagatc cgctttaata
    14461 accggcaaaa tatccgggcg gatgacttta atcaccacct ctttaccatt cgatttcaat
    14521 cgcgcggtat gaacctgggc gatagaagca gaagccagtg gcttgatttc aaaatcgtca
    14581 aaccacgctt ctaccggcaa gccgcccatt gcagcttcaa tctgctgctt cgccagcttg
    14641 ccatcaaacg gagcgacttt gtcctgcaat aacgccagtt gatcggcaat atgcggcgga
    14701 aaaagatcgc ggcgggttga taacatttgc ccgaacttga tccataccgg ccccagttct
    14761 tgcagggcca gtcgtagtcg ctcacctaaa ggtttgtctt tatgccgatt tggcatccag
    14821 aataatgagt atcgccatag ccgtagcggc agggtgatac gcattttggg gatcagttca
    14881 tcaagtccgt agcttaaaaa agtgcgaatg atgaaatata ggcgccgtac ttcacctggc
    14941 gtcatttagc ctccagtttt tccagccgtt tggtcagggc atcaacagca cactcgacag
    15001 cagccgtctc ttccgcaaac caggccactt caagcggacc gggtgccata cgccactctt
    15061 cagtaatggc ttccgccaca taacgttgct ggcgcttaat gccgtgatgc aggaactttg
    15121 cgcctccgcg catggctttg ctgattcctt cagcggcgat atcaccggta taaggggcaa
    15181 gcagttccgc agggtcgaac tctgccagat ctgccagcgc aacgaagttt tgcaccacct
    15241 gaatatcgcc ctgcacttcc agctcaccac tgcgaatcag ggcggcaagc tgctggcgat
    15301 cgcgaagttt cggcaacaca ctggcgtagg cgataacggt gcagtcagca tcgcctgccc
    15361 attcgcccag tacatcaacc tggcgttcgc tgaacaccag aatcaatgac gtcgaaaagc
    15421 cttttacctc cacgcgcaat actttaccca gcagacgcga gcgggctgtt ttcagcgcgg
    15481 gtgagcgata caggaaggtg ttgagcagac tttcaattcc tgccgtcact aaaggtttaa
    15541 aaggcatttc cggtctcctg tcagaactta taaccacgat gcagcgccac aacccctgcc
    15601 gtcagattgt agtagtcgac actttcgaat ccggcatcct gcatcatggc tttcagggta
    15661 tcctgatcgg gatgcatacg gatggattct gccagataac ggtagctgtc ggcgtcgttc
    15721 gcgaccagtg agccaatacg cggcagcaca tggaaggagt atgcatcata ggctttgctc
    15781 agcggctcga taattggctt cgagaactca agcaccagca ggcggccgcc gggtttcagc
    15841 acgcgataca ttgaacgcaa tgctttatct ttgtcggtga cgttacgcag accaaacgaa
    15901 atggtgatgc aatcaaaggt gttatccggg aacggcagcg cctcagcgtt cgcctgaaca
    15961 tactcaacgt tgccaatcac accgatatta cgcagcttct cgcggcccat tttgagcatg
    16021 gattcattga tatcagcaag gaccactttg ccagtttctc cgaccaggcg ggagaatttc
    16081 gctgtcaggt cgccggtgcc accagccaaa tccagcacgg tctgcccacg gcgtacgccg
    16141 ctgcaatcaa tcgtgaatcg cttccacaaa cgatgaatac caaatgacat caaatcattc
    16201 atgacatcgt attttgatgc cacggaatgg aaaacgtggg cgaccatatc cgctttttgt
    16261 tccttcgcga cggtctgaaa accaaagtgc gtcgtttctt gtaacttatc caccatctca
    16321 atgcctgctc atcaaaaaat tgttccagaa gtgtaacaga ttgggcgtcg atgccctaga
    16381 tttctacccg gcttaactac tcccaatggg ctagcgcgac tgctgattat attcatcatc
    16441 gcgttgataa gcttcatcat tcggctgctc cggaaccgac cgaagtcgat actcttcatc
    16501 ctggctcacc gcctgttcag ccaaatccgg attaatctcg cgtttaattt ctactcctaa
    16561 accgcgaaac gcttctgcct gcgccagcac atttccgcgc cctgaagaga gttttttcat
    16621 tgcctgccga tagttatcct gcgctttgtc gagactttga ccaatcgcgg acatgtcatc
    16681 gatgaacaaa cgcatcttgt cgtacagctt gctggcacga tcggcgattt gctgggcgtt
    16741 gcggctttga tgctcataac gccacaggtt ggcgatagtg cgcagcgcca ccagcagcgt
    16801 agtcgggcta accagcatga tattgttttt caacgcttcg gtgatcagct ccggctggcg
    16861 gtcaagcgcc agtaaaaaag cgggttcaac gggaataaac atcagcacgt aatccaaagt
    16921 tcgcagcccc ggcagctgtt gataatcttt gcgtcccagc aaacggatat ggttacgcac
    16981 cgacgcgata tgttcctgta gcgcgctttc gcgggtgtag tcgtcttcgg cgttaaaata
    17041 gcgttcatag gcgaccagcg tcattttggc gtcgatcacc acatcttttc cctgcggcag
    17101 ccgcacgatg acatccggct gcatccgcga gcgggcgtca ttttcgatgc tgacctgggt
    17161 ttcatattca tacccttcac gcagaccgga agcctccagc acccgcgtca atactacctc
    17221 gccccagttg ccctgggttt tattgtcgcc tttcagcgcg cgcgtcaggt tgatcgcttc
    17281 ctgggccatt tgcgcgttga gttgctggag attgcgaatt tcgtgggtca gggtatggcg
    17341 ttcttgtgct tctttaccga agctgtcctg aacctgacgg cggaaaccgt ccagttgttc
    17401 acgtagcggc gacaacaggc tgttcagact ctgacggttt tgctcatcaa cccggcgatt
    17461 gctgtgctca aaaatacggt tggcgaggtt ttcaaactgc tcactgaggc gctgctcgct
    17521 gttaatcatc tggcgaattt tatcgtcagc atgttgctgt gcggcttcca tccgcgtggt
    17581 tacttcacgc agatcggcct ccagagaggt gttaatactt tgcaggctgc gcacttcgtt
    17641 attgagtaac tcgcactctg cacgccagtg ctcgctttgg gtaatttgtt gttttgccgc
    17701 gcttaactcc gctaccatct cttcacgttc agctaattgc tcggcttttt gctgcgcatg
    17761 ttgataactg gcaaacagcc agccaattgc cacacccacc aacgcaataa ctgcgtaaac
    17821 catgattgag aaatccacaa tgcctcctga cgcaacaact tacccgcaca aaatagaatt
    17881 gtgctgtaca aacgtccagt tggaaaggca tttcctgcga ggcgctacgc aaaaatacaa
    17941 aaggccgaac gcgtcggcct tcagacagga gaagagaatt acagcagacg acgcgccgct
    18001 tccaccacga ttttcaccgc ttggctttca gtttgtttca tcgtctcagc attcgggatc
    18061 tcttgctggg tgcggttaac gataacaccc gctaccatac cggcacgcag gccctgactt
    18121 gcacacatgg tcagcagggt tgcagattcc atttcatagt tcattacgcc catcgcctgc
    18181 cactcttcca tagaaccttt aaagtgacga actacgcgac cagagtaagt atcgtaacgt
    18241 tcctgacctg ggtagaaggt atcagaagaa gctgtcacgc caacgtgagc tgtcgcgcca
    18301 atggatttcg cagcttcaac cagcgcagtc gtacattcga aatcagcgac agccgggaat
    18361 tccagcggtg cgaagtgcag gctcgcgcca tccagacgga cagacgccgt ggtaaccagg
    18421 acatcaccca cattaatatg cggctgaata gcgcccgttg taccgatacg caggaaggtg
    18481 cgaatgccca gctgtgccag ctcttcaaca gcaatagagg tagacgggcc gccgataccg
    18541 gtagagcaga cgataacagg tttaccatcc agctctgcac gccaggtagt gaattcgcgg
    18601 tgagatgcca gcttaaccgg cttatccatc agcgcggcga tcttttccac acgatccggg
    18661 tcgccaggga cgatggcaag cgtagcccct tgtaaatcgt ttttagtgag gccgagatga
    18721 aaaacatcag acttggacat atacaactcc tctgtgaatc ggtttagtca gaagaagcaa
    18781 aaagacactt taccgaaggg tttaacattt tttcgtgata ctcatcacca tgacgcaaat
    18841 gcgttgcata aatttaccca ccaaaagtga ttcaaatcac ataaatcact cttcattctg
    18901 caggactgca taaaagatga gccgattcag gcaatgtgat ttgttgcatg ctgactatag
    18961 ttaacattgc gcaacatttt tataagggta cggagaatac catggcaaca acacaacaat
    19021 ctggatttgc acctgctgca tcgcctctcg cttcgaccat cgttcagacc ccggacgacg
    19081 cgattgtggc gggcttcacc tctatccctt cacaagggga taacatgcct gcttaccatg
    19141 ccagaccaaa gcaaagcgat ggcccactgc cagtggtcat tgtagtgcag gaaatttttg
    19201 gcgtgcatga acatatccgc gacatttgtc gccgtctggc gctggagggg tatctggcta
    19261 tcgcacctga actttacttc cgcgaaggcg atccgaatga ttttgccgat atccccacgt
    19321 tgcttagcgg tctggtagca aaagtgcctg actcgcaggt gctggccgat ctcgatcatg
    19381 tcgccagttg ggcttcccgc aacggcggcg atgttcatcg tttaatgatc accggattct
    19441 gctggggtgg acgtatcacc tggctgtatg ccgcgcataa tccacagcta aaagccgcag
    19501 tggcgtggta cggcaaactg acgggcgaca agtcgctgaa ttcaccgaaa caacctgttg
    19561 atatcgcaac cgatcttaac gcgccggttc tcggcttata tggcggtcag gataacagca
    19621 ttccgcagga gagcgttgaa accatgcgcc aagcgctgcg ggctgctaat gcgaaagcag
    19681 agattatcgt gtacccggat gccgggcatg cattcaacgc tgattatcgc ccgagctatc
    19741 atgccgaatc tgcgaaagat ggctggcagc gtatgctgga atggtttaag cagtatggag
    19801 ggaagcggag ttagtttcct cttagtctat atttgagatg gtgagtgaac gagtgcgttt
    19861 tgctgccatc tctgtccccc aaaaaataat cagtatgaat tgattggaga ttacgactcc
    19921 gctatttgac cttaagaaag tcggcaagtc atagtcataa atgagtctct tcaatggaag
    19981 acaccttaga gatttaccat caactcccat tcacaaacaa acattaatta ttatcaacac
    20041 attcacatta attataaatc atctcagacc ttcctgataa aaagatatta aagtgaaaca
    20101 ttttgttttt cacattttag ttcatcactt ttaggcgtaa ataaaggtaa aaaaaacaac
    20161 aatactattt ctctttcaca aaagaattaa caaaaggttt ttcaaggatg tatttcctct
    20221 cgttgtggaa cgagcgcatc aataggtaat cgctggcaga ttggccatga agatgaaatc
    20281 ttcgcgttct cgctctctaa tagtattacg aatacaggca aagggtcata attgcatggc
    20341 cttagtttct gtaaattgat tgacaaaagc tccccgttac ttattaacgc tattaacaat
    20401 aacgagcagt tgttcatgga gtttgacttc tatcggatca ataggtttgg tcgatgggag
    20461 aaatattaca acattcaact ccgcggcgcg ctcttatcag caatcaatca cctgtttact
    20521 gagaacaatc tggatacaga agccatcact gtcagttatg aatatatact gattgctaat
    20581 actgaattta gttattgggc atttcccgat aactacaacc gtctgtttat accacggcca
    20641 aaaactaaag ctggtaatgg tttcaaaaca cttaatagta aagcggttgg cagactgctt
    20701 gctgctgtcg gcatatacaa tgggaatatc gaaggattca gggaaacagc agacaagttg
    20761 gggggagatg cacctgctgg ttacgatcaa tttatggata acaaagggtt actcatcgct
    20821 ggtgcttcaa tagttgctgg agcagttctg gggagaatga gactccctga tttggaatca
    20881 cttgagcatt tcggagccag aggagcagta tcaggaagac catttaatcc cgaccttgcc
    20941 ggtggtccaa tagaaaattg gacgacagat ggcgtaacaa tcaacaggga aggtatcgct
    21001 attgttgaaa aacatatagc cagatttggt catgatcctg taaatgaagt gatgatcaat
    21061 agactgaaag acattgagaa aagaaaaatc cccccagaac aagtagatct taacttctat
    21121 actcatgagt gtcgggaata tcagcgttac tgtaatcttg gttgggaaac aggacaacct
    21181 gatggtgacg caggctatgc tctctggaat catacgcata ctgctactct agaagattat
    21241 aaacttaagg gagaacttaa tgacttatac caccaggatg cacttgacta tgataactga
    21301 aactgaaatt aacgtactga aagttatggc tgagaaagat ataaactgga actggatgaa
    21361 tctcgatcgc acactatcca taaggcaaat tccaggattc ggtaatgttg ttaacattgt
    21421 taacaaatta gctaacgagg gtttggttat tattgaggat agcggacata ggtctatgcc
    21481 tcactaccac gttactgaaa agggatacaa tttcgtgaaa agtgagaata aataacgtag
    21541 cgttgattac tgaacaaatc gctcaggatt atattttgcg taaaaatgat tcggttattt
    21601 ctgtatctga acgggcgcag atagcaaaat ggcttccggt gatggaagcc atcagattat
    21661 tggcaaagtg cgcgttgttc atgccggatg cggcgtgaac gccttgtccg gccaacaaaa
    21721 ccccaaaatt caataaattg cataaattat gtaggcctgg tatcaggcag ttttgcctct
    21781 ttcatcgtac tgcaatttac agtgactcgt taatattcat catccccgac gcaaattctg
    21841 cgccgcctgc accatgttcg ccagtgccgc gcgggtttct ggccagccgc gcgttttcag
    21901 gccacagtcc gggttgaccc acaggcgctc tgccggaatg cgttttgccg ctttcttcag
    21961 caaggcttca atccattcca cgctcggtac gtttggcgag tgaatgtcat agacgcctgg
    22021 accgatttca ttcggataat caaactcttc aaacgactcc agcaactcca tgtcggaacg
    22081 cgaggtttcg atggtgatga cgtctgcgtc cagcgccgca atcgaatcca tgatgtcgtt
    22141 gaactcgcaa taacacatgt gagtgtggat ttgtgtgtca tctttcgcca cggcggcgtt
    22201 gatacggaag gcctctacgc cccactggag atacacatcc cagtcgctac gacgcagcgg
    22261 taaaccttcg cgcagagccg gttcgtcaat ctggatgatg ccaattccag cggcttccag
    22321 atcggccact tcatcacgca gcgccagcgc aatctgtttg gcgatggttt cacggctgac
    22381 atcttcacgc gggaacgacc agcagagaat agtcacaggg ccagtcagca tccctttcac
    22441 cggtttatca gtcagagatt gcgcatactt cgcccactcc acggtaatcg gtgccgggcg
    22501 actaacgtca ccaataacaa tcggtggctt cacgcagcgg gaaccgtagc tctgtaccca
    22561 accgttttgc gtaaagacaa acccgtcgag gtgctcgcca aagtattcca ccatgtcatt
    22621 acgctcggcc tcgccatgta ccagcacatc cagtcccaaa cgttcctgtt caacaatggc
    22681 ctgcctgata tgttccgcaa tgcccgtgcg gtagttattg gcgtcgagat tgcccttttt
    22741 gaaatccaga cgcagggtac gaatttccgt ggtttgcggg aaggaaccaa tcgtggtggt
    22801 cggccacgct ggcagtttaa aacgtgcacg ctgggcttca gcacgcactt catagacact
    22861 cgcacgctgg ctgtcctggg cggtgatcgc cgccagacgc ttttctaccg ccggattatg
    22921 tacacgagta gagtgacgac gcgcctgaat tggggcgctc cactctgcca gagctgccgt
    22981 gtcaccactg ttcagcgcat cgcgcagcag tgctagttca tggcattttt gtagggcgaa
    23041 ggcaaaccag cttttcactt ctgcatcaag acgcgtttcc acgctcaggt cgatggggct
    23101 gtgcagcaac gagcaggaag atgccaccca caaatcacgt ttgccgacaa tgtccttaat
    23161 ttgcgcatat ttctcggtaa gatcggcgcg ccagacgtta cgaccattga tcagacccgc
    23221 agacagcaac cagtcagaag gcaggcgctt gtgcagttca gcaacgtcat ctttaccatg
    23281 tacgaggtca acatgcagac cctgaacagg cagcgcagta atcgtgtcga gatttggcgt
    23341 tacgccttca aaataggtgg tcagcagcag tttcacctgt ccctggagcg cgtcgtaagc
    23401 gggtttgtat gcgtccagcc acgcctgtgg tagttccagt accagcgcgg gttcatcaat
    23461 ctgtacccac tcgatgccgc gtttcgccag ttctgccagc acttgctgat aaaccggcag
    23521 aatgtcgttc agcaggctaa ggcggtcaaa ctgttcacct ttcactttcc ccagccacag
    23581 gtaagtaacc ggccccagca gcacaggctt aacgttgtgg cccagcgcca gcgcctcgtc
    23641 cacttcctcc agcagctgcg tccaggtcag tttgaactgt tggcctttaa cgaactccgg
    23701 caccatgtag tgatagttgg tgttaaacca tttggtcatt tccgctgccg ccgcaggttc
    23761 gccagtcggc gcacgtccac gaccaatacg gaacagggtg tcgatatcta ccgaaccgtc
    23821 tttgttctga tgacgtggcg gaacattacc cagcagcaaa ctggtggtca gtacatgatc
    23881 gtaccaggca aaatcgccca ccggcagcag gtcgataccc gcttgctttt gttgatccca
    23941 gtgacgagca cgcagttcac gccctactgt cagcagttct tcacgcgtgg agttccccgc
    24001 ccaataactt tcttgcgctt ttttcagctc gcgacgcagg ccaacgcgag ggaaaccgag
    24061 ggtgtgatta agaattgtca ttatatgccc cttatggaat ttttagtatt tagccgtcca
    24121 gatgtttaca catccataat tggcggttac tgtatattcc tcaagcgcaa attattcatg
    24181 ccgaagtgaa ggactttcat gatcgaagta aaacacctga aaacgctaca agcgttgcgg
    24241 aactgcggct ctctcgcagc cgctgcggcg acgttgcatc agacgcaatc cgccctgtct
    24301 caccagttta gcgatctgga acaacgcctt ggcttccggc tatttgtgcg taagagccag
    24361 ccgctacgct ttacaccgca gggagaaatc ctgttgcaac tggcaaacca ggtgctgccg
    24421 caaatcagcc aggcactgca agcctgcaat gaaccgcagc agacgcgtct gcgcattgcc
    24481 attgagtgcc atagctgtat tcagtggctg acgcccgcgt tagaaaattt ccataagaac
    24541 tggccgcagg tagagatgga ttttaaatcg ggcgtgacgt ttaacccgca gcccgcgttg
    24601 caacagggcg agctggatct ggtgatgacc tccgatatcc tgccgcgcag tggcctgcat
    24661 tattcgccga tgttcgatta tgaagtacgc ctggtgttag cacctgacca tccactggcg
    24721 gcaaaaacgc gtattacacc ggaagatctc gccagcgaga cgctattaat ttatccggtg
    24781 cagcgtagtc gactggatgt ctggcggcat tttcttcagc cggcaggcgt cagcccgtca
    24841 ctgaaaagcg tcgataacac cttattgttg attcagatgg ttgccgcgcg gatgggtatt
    24901 gccgcgctac cgcattgggt agtagagagt tttgagcgcc agggtctggt ggtgaccaaa
    24961 accctgggcg aaggcttgtg gagccgactg tacgccgccg tgcgcgatgg cgagcagcgt
    25021 cagccgatta cagaagcatt tattcgctca gcgcgcaatc acgcctgcga tcatctgccg
    25081 tttgtgaaga gcgcggagcg acccacttac gatgcaccca cagtgaggcc aggatcacca
    25141 gcgcgcctgt aatgaacgtt ggccagtgcg gctgttggtg ccagatagcc aggtttacca
    25201 gcagccctgc cggaacgtgc atattattca taatgcccag cgttccggcg tccacctgcg
    25261 tcgcgccgta gttccacata aagtagccaa tcccggaagc caccacgcca agaaacacca
    25321 gaatacccca ttgcagcgtg gtttgcggca ttttctgcgc atttcccagc aagaaccatg
    25381 caattaccgc caccaaaaac gcgccaagat agaaccacgc aaaggcgtta tgctgtggca
    25441 tcgggcgagt ttccatcagg cgtttgtaac ccaccatgcc gatggcaaaa gtgatattgg
    25501 agagttgcac cagcaacaag ccagtccaga aatggtcggt gacctgatca tagcgaataa
    25561 tcccagcacc aatcaccgcc agcaaggcgc taaaagcata gccccagcgc agacggcgct
    25621 tactcatgat gtcataaatc agcgtgatgt agagcggcgt cagtacggtg aacagcagca
    25681 gttcggagac cgtcaggtat agataggcgc ggaaactcag catatacatc acgccgagct
    25741 gcatcacgcc caccagcata tacaggccga ccgttttcag gctattgcca cgggtacgca
    25801 gaaacggcag aaaaacgagt gccgccaggc caacacgcac cagaaccgca aaatagctat
    25861 cgacgtgccc cgcaaggtac tcgccataaa agctaaagga gaaggcccac agaatcgtgg
    25921 tgatgataag tagcgccaca atggaaaact ctttgattaa cgagtatcca ttgtagcgaa
    25981 gtatcaggtt gacaactgac caaataaaga acgattacga taaatagagt ttacgcagat
    26041 aatgcggcac cgcgtcgtcg gcattagtac caatcacttc cagctcagga tgaaggtctt
    26101 tcagacgctg gtgcgcactg cccataatgc agcctttccc cgccatcgac agcatttcgg
    26161 cgtcgttcat cccgtcacca aatgcaatac aatccttcag gctgtagccc agtttcttcg
    26221 ccaccgcttc cagcgcatgg cctttcgaca cgccgcccgc catcacttcc agacaggtta
    26281 aggtagagaa actgacgttg acgcgatcgc cccagcgagc gttaatcgcc tgctccagcg
    26341 gcagcagttg ttcatgggaa tcgcaggtga agaacacttt gctgacgcct tccgactcca
    26401 gtaatccagg ctcatacagc gcatatttga acaccgcttc tttaaaaaag cgcatctctt
    26461 ccgggcgatg gcgattcata aaccattcgt cgtcgcgata aacgttagta atgatgtccg
    26521 gattgtcgtt gactacgcca aacagatcgc tggcaatgtc gcgatccagg ttatgagcaa
    26581 aaatcagatt accatccaga tcgtgaacgc gcgcaccatt ggaggtaatc atgtaagact
    26641 taatctccag attatcgcga atttgcccca catcaacgtg gtgacgaccg gtcgcaaaca
    26701 caaagttgat gccgcgcgcg gtgagcagct tcagagtttc tttggcgtaa ggggataacg
    26761 tatggtcggg agaaagtaac gtgccatcta aatcagacgc aacaacctgg tacataagaa
    26821 atttaaacct ctgtagagcg gtttccgctg ggtgagttat gcctgttgaa aaaatcaacg
    26881 atggcgtgga gcgcgactga gcgcattgcg tccttttcaa aaaggatctc atggtaagca
    26941 cctttaatta ccaacggccg tcctccttcg acaggatggc ccacggcggt gcggagttca
    27001 caaaaacggt catgcatgcg gttatccacc acgcgttcct cttcagcctg caagagaagc
    27061 gttggcgtgg cgtcatcacc cgcaccggct aacacctgtt cgccagccag aatactttcg
    27121 cgtacccaat ggtaggtcgg cccaccgacg cgaatcgttg ggtcatcagc atagaagcgt
    27181 aagttacgtc gatatcgctg tctgctgtgg gtcagtacgt tgatagcaaa cggcaacgcg
    27241 cgccagcgcc cggtgcctat tgcatagcca tcacggaaac gtggatgcgc ttcggcccag
    27301 ttgaggatct gccgtgccat aaatgacggc atacgaatca cgatcccaaa cattggcgca
    27361 gttagcgcaa tggcgtcaca tacacctgga tggcgttgca gaaataatgt ggagatcgca
    27421 ccgcccatcg aatgtgccag tatataccgt ttacgccacg gaccgggctg gacctcctgt
    27481 tgccagaatg ccgccagatc atcaacataa tcattaaagc gattaacatg cccgagatgc
    27541 ggatcggcta acaggcgacc ggaacgtccc tgcccgcgat ggtcgatgat taagacatca
    27601 aaccccaaat ggaacaaatc gtaggccagt tccgcatatt ttacgtagct ctcaatacgc
    27661 cccgggcaga tgactaccac ccggtcatgg tgctgtgcgc gaaaacggac aaagcgcacc
    27721 ggaatgtcat ccacaccagt aaactctgct tcatcacgct gacgccagaa atcagtcagc
    27781 ggtcccatgg taaaagcagc aaacgcgttt tctcttgttt cccagtcttt ttgctgctga
    27841 aacatcgggt aatctgcctc ttaaaccacg taaaatcgtt ttttttagcg tgcctgacac
    27901 aacgctgcga cagtagcgta ttgtggcaca aaaatagaca caccgggagt tcatcatgac
    27961 cttagaatgg tggtttgcct acctgctgac atcgatcatt ttaagcctgt cgccaggctc
    28021 tggtgcaatc aacactatga ccacctcgct caaccacggt tatcgcggcg cggtggcgtc
    28081 tattgctggg cttcagaccg gactggcgat tcatattgtg ctggttggcg tggggttggg
    28141 gacgctattt tcccgctcag tgattgcgtt tgaagtgttg aagtgggcag gcgcggctta
    28201 cttgatttgg ctgggaatcc agcagtggcg cgccgctggc gcaattgatc ttaaatcgct
    28261 ggactctact caatcgcgtc gacatttgtt ccagcgcgca gtttttgtga atctcaccaa
    28321 tcccaaaagt attgtgtttc tggcggcgct atttccgcaa ttcatcatgc cgcaactgat
    28381 gcagtatatc gtgctcggcg tcaccactat tgtggtcgat attattgtga tgatcggtta
    28441 cgccaccctt gctcaacgga ttgctctatg gattaaagga ccaaagcaga tgaaggcgct
    28501 gaataagatt ttcggctcgt tgtttatgct ggtgggagcg ctgttagcat cggcgaggca
    28561 tgcgtgaaaa ataatgtcgg atgcggcgta aacgccttat ccgacttact ctgaagacgc
    28621 gtctggcatc accgcgaaat aatcaaatga atgccaaatc cggcaaataa cgccccggca
    28681 aaaccatcaa tccacttcgc cagacgttga taaccacggc gcatttgcgg cagggcaaac
    28741 agactggcaa cgacggtaaa ccacgccagt gtttcgacaa taatcaacgc gaaaatgccc
    28801 cagcgctcgg tagtgccaac gttatcaccg acaaacaatg agaacaccga gccaaagtag
    28861 ataatcgctt tcggattagc gagattggtc agtaaacctt tcaggaaact gcgcccactt
    28921 ttcgccagct cgacctgtgg cgcaggtgca gaaaccgcct cttttttcag cgcgccgcgc
    28981 agcatctggt aacccatcca gcagagatac aggccaccgc caaccataat cagcgtatgc
    29041 agccaggcca ttttttcgat aatcaaatgc aggccaagca acgcaatccc tgcccaaacc
    29101 ataacgccgc aggtaatacc cagcacgccc atcatcgctt ctttacggga acgactgaca
    29161 gcggtctgag agacaaaaaa gaaatcggga ccgggactca taagcgccac aatgtgcacc
    29221 atggcgacgg tgagaaataa catcaacata catttgactc gcgggggaaa cgtttacgga
    29281 gtcttcatcc tggcactttt ttattctgct gactactctt cgtcgtcgcc atcgacatgc
    29341 gcacgaatca gcgccataaa cggtttgcca aagcgttcca gcttgcgcat cccaacgccg
    29401 ttaacgctga gcatttcgct ggcggtgatc ggcatctgtt cagccatctc aatcaaggtt
    29461 gcgtcgttaa acaccacgta cggcgggaca ttgctttcat cggcaatcga tttacgcagt
    29521 ttgcgtaatt tggcgaacag tttgcgatca tagttgccgc cgaacgattt ctgcatcgct
    29581 ttcggtttga gcgccacgat acgcggcacg gcaagttgca aagaggattc gccgcgcagc
    29641 accggacgcg cagcctctgt cagttgtagg gcagaatgct gggcaatatt ttgcgtcacc
    29701 aggccgaggt gaatcagctg gcggatcacg ctcacccaat gttcatggct tttatcacgg
    29761 cccatgccat agactttcag tttgtcatga ccatagtcgc ggatacgctg gttattagca
    29821 ccgcgaatca cttctaccac ataacccatc ccaaaccgct gattcacacg accaatggtg
    29881 gaaagcgcaa tctgagcatc ggttgaaccg tcgtactgtt tcggcggatc gaggcagata
    29941 tcgcagtttc cgcacggctc ctgccgccct tcgccaaagt agttcagcag taccagacga
    30001 cggcaagttt gcgcttcggc aaacgcgccc atcgcattga gtttatgacg ttcgatatcc
    30061 tgcaactgcc cctgcggctt ctcttccaga caacggcgca gccacgccat atcagccgga
    30121 tcgtaaaaca gcatcgcttc cgcaggcagg ccatcacgcc cggcgcgacc ggtttcctga
    30181 taataggatt cgatattgcg cggaatatca aagtggacca cgaagcggac gttcggtttg
    30241 ttgatgccca tgccgaacgc cacggtcgcc accacaattt gcaggtcatc acgctggaat
    30301 ttttcctgca cgtcggcgcg aacattattt tccagcccgg catgataggc cgccgcgcta
    30361 attcccttgc tttgcaggcg cgcagcggtg tcttctactt tcgcccgact gttgcagtag
    30421 ataatgcctg acttgccgcg ctgttcctgc acgtagcgca tcaactgatc gagcggtttg
    30481 aatttctcca tcagcatgta gcgaatattc gggcggtcaa aactgctgat ttgaatcagc
    30541 ggatcgttca gccccagcag gcgcacgata tcctggcgcg tggtgtcgtc ggctgtggcg
    30601 gtcagcgcca taaacggcag cgtcgggaac cgctggcgca actgaccgag cgcggcatat
    30661 tccgggcgga aatcgtggcc ccattgggag atacagtgcg cttcatcgac ggctaataac
    30721 accggattcc agtgcgccag atgctcaaga aagttatcca gcatcaggcg ttccggggcg
    30781 atatacagta agcgaatttg cccggtgcgg cagcctgtca tcacttcaag ttgctgttcg
    30841 cgggtttgcg tcgagttaag gcacgccgcc gccacgccgt tggcctgtag ttgatccacc
    30901 tgatctttca tcaacgaaat cagcggtgaa acaaccacgg taaggccgtt tagcaataag
    30961 gcaggaattt gatagcaaag ggattttccg ccaccagtgg gcataacaac caggcaatcg
    31021 cgaccggaaa gcacagtgtc gataatttct tcctggccgg ggcgaaactg ttggtagcca
    31081 aaggtttctt gtaaaacctg tttagctccg gactccagat tcaacacttc cgcctgcgcc
    31141 acattcaccc cgattgcctg aaataaaaac aggcgctatt ttcagcgcct gcgcgagaaa
    31201 ctgcaattct tttagtctct gagagggtaa tcctggatgc tggattccag atttgccaac
    31261 cactcaaccg ttcatcaaaa caagtcgttt agcataaccc ctacaccgac acgggtctgg
    31321 ttgaagttat agtcgatgag cgattcgcca tagccgctgt aaacctgagt ataaaggcgc
    31381 acatgtttgg tgatcgggta acttaagcct aactccgcgc cgccgtagcc ggtgttccag
    31441 ttgtactgtc ctttcgcact gagcaccgca tcaccgaggt gatagccgat tttaagctgg
    31501 tagtaaccca tatatttggt gatatccggg ttatcgtcag tattacccac cacataccac
    31561 ggcttcactt ctaccagcca gttaccgttt tctgccatca ggcgagtata aaggcggttc
    31621 cagctgcggg aggtcgggtc tgaacgcccg ttagagtcgt ggttataccc catctccaca
    31681 tcgcgcagcg tccaacctgc aaaacggtaa tcggtggcaa aaccgaggaa caattgcggt
    31741 tcgtagttgg tttcacgaaa cggtgaagac tcttcgctat tggacagttg ccaccaggat
    31801 ttttgcgtat aagacgcacc caacaccgag tttgggccta aaatcccacg ccacagcgga
    31861 aatgccaggc tcaactgaaa ctttacttca tccttacgcg cattttccgc ccagtcgtaa
    31921 ctggcaatcg cttctttgtt cagatcgctg gtttgggtgt agatgaggta gttggtgtca
    31981 taaggataga gcgtgaacgg attgtcatgc tcctgcagca tattggcgat aatactgcca
    32041 cgcaccgctg gcgcgtcatg cacctctttc accgttgcct cttgtgcata tactgccata
    32101 ggcaacataa acaccggcaa caaccagccc tgcagagtcc gcatcggtcg tgttctccgt
    32161 aacgaattat tgataaggtg aatgtttttc tgcgggctat tttacatact taactccatt
    32221 gccgttagtt atcccttcct aaagtagaaa ccaacaacaa agaagcataa aatcaacatt
    32281 tcattaacca atgaagtgta aggatgatat gtctgccgta ctgaccgctg aacaagccct
    32341 gaaattagtg ggtgagatgt ttgtttatca catgccattt aaccgcgcat tggggatgga
    32401 actggagcgt tacgaaaaag agttcgcaca gctggccttt aaaaatcagc cgatgatggt
    32461 gggtaactgg gcgcaaagca ttttgcacgg cggagtcatt gcgtcggcgc tggatgtcgc
    32521 cgccggtctg gtgtgcgtgg gaagtacctt aacccgccac gaaaccatca gtgaagatga
    32581 actacgccag cggctatcgc ggatggggac cattgatctt cgcgttgatt atctgcgccc
    32641 aggcaggggc gagcgtttta ctgctaccag tagcctgttg cgtgcaggca ataaagtcgc
    32701 cgtcgcccgc gttgaattac acaatgaaga acagctttat attgccagtg ccaccgccac
    32761 ctatatggta ggttgaagac ataaaagcag gtaaactgct gttaccaatt aaaaatgagt
    32821 attcccgatg gatgcaaaac aaacgcggca gggcgtatta ctcgctcttg ccgcttattt
    32881 tatttggggt attgcgccag catacttcaa gctgatttac tacgtgcccg ccgatgagat
    32941 cctgacgcat cgcgtgatct ggtcgttttt ctttatggtg gtgctgatga gcatttgccg
    33001 ccagtggtcc tatttaaaaa cgctgattca gacgccacag aaaattttta tgctggcagt
    33061 ctctgccgtg ctgattggtg gcaactggct actgtttatc tgggcggtga acaatcacca
    33121 tatgctggaa gcgagccttg gttactttat taacccgctg gtgaacattg tgctggggat
    33181 gattttcctc ggcgagcgat tccgccggat gcaatggctg gcggtgattc tggcgatatg
    33241 tggcgtgttg gtccagctgt ggacttttgg ttcgctacct attatcgcgc tggggctggc
    33301 atttagtttt gccttctacg gcctggtgcg caagaagatt gcggtagaag cacaaaccgg
    33361 catgttaatt gaaaccatgt ggctgctgcc cgtggcggcg atttacctgt ttgctattgc
    33421 cgacagttca accagccata tggggcaaaa cccgatgtcg ctgaatttac tgctgatcgc
    33481 cgccggtatt gtcactaccg taccgctgtt gtgttttact gccgctgcca cgcgcctgcg
    33541 tctctcaacg ttaggctttt ttcagtacat tggcccgacg ctgatgttcc tgctggctgt
    33601 gacgttttat ggtgaaaaac cgggtgccta taagatggtg actttcacct ttatttgggt
    33661 ggcgctggca atttttgtga tggatgcgat ttatacgcag cgtagaacgt ccaaataaaa
    33721 aataaatata ttctgaaaaa atatgccgac tcttgtatga gagtgggcat attgccatgc
    33781 tgacaggaga ctcacacaag gatgtaaaat ttatgttacg tatgtttatc ccaacatcta
    33841 acggtaagat ttccagacgc cgatatatat tttcatttat tttaataaat ttcatttttg
    33901 cctttcttat tatctttttt aacgatgggg aagcaggttt tcttgttata gtctctacca
    33961 tcgcactcca ttatctcgtc atcaa
//
LOCUS       DAJVTL010000032        33783 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.032, whole genome shotgun sequence.
ACCESSION   DAJVTL010000032 DAJVTL010000000
VERSION     DAJVTL010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33783
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.032"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(221..2635)
                     /locus_tag="OQQ26_001473"
     CDS             complement(221..2635)
                     /locus_tag="OQQ26_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1856968.1"
                     /translation="MIARWFWREWRSPSLLIVWLALSLAVACLLALGNISDRMEKGLS
                     QQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAV
                     DDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMVLLNLKTGDTIDVGDATLRIAGEVIQE
                     PDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLK
                     PEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAI
                     LKTLGAGRAQLRKLIVGQWLMVLTLSAITGGAIGLLFENVLMVLLKPVLPAALPPASL
                     WPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVL
                     LLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQP
                     WSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAF
                     LAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNW
                     PPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFCAKVTSLRKVDWESLRPNFYFIFP
                     EGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALE
                     VMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSG
                     LVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKAL
                     FRQFAG"
     gene            complement(2632..3318)
                     /locus_tag="OQQ26_001474"
     CDS             complement(2632..3318)
                     /locus_tag="OQQ26_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1856969.1"
                     /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
                     LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTSDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
                     LVNGQLQEEA"
     gene            3289..3912
                     /gene="tesA"
                     /locus_tag="OQQ26_001475"
     CDS             3289..3912
                     /gene="tesA"
                     /locus_tag="OQQ26_001475"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HCS1856970.1"
                     /translation="MNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSA
                     SAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR
                     GFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS"
     gene            3902..4711
                     /gene="ybbO"
                     /locus_tag="OQQ26_001476"
     CDS             3902..4711
                     /gene="ybbO"
                     /locus_tag="OQQ26_001476"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HCS1856971.1"
                     /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
                     GCRKPDDVERMNNMGFTGVLIDLDSPERVDRAADEVIALTDNCLYGIFNNAGFGMYGP
                     LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
                     ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
                     TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG"
     gene            4772..5626
                     /gene="cnoX"
                     /locus_tag="OQQ26_001477"
     CDS             4772..5626
                     /gene="cnoX"
                     /locus_tag="OQQ26_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HCS1856972.1"
                     /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPL
                     LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
                     LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL
                     ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(5689..6468)
                     /gene="fetB"
                     /locus_tag="OQQ26_001478"
     CDS             complement(5689..6468)
                     /gene="fetB"
                     /locus_tag="OQQ26_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HCS1856973.1"
                     /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDILWSVGRAI
                     IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG
                     AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL
                     SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
     gene            complement(6455..7132)
                     /gene="fetA"
                     /locus_tag="OQQ26_001479"
     CDS             complement(6455..7132)
                     /gene="fetA"
                     /locus_tag="OQQ26_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HCS1856974.1"
                     /translation="MQENSPLLQLQNVGYLAGDTKILNNINFSLRAGEFKLITGPSGC
                     GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
                     FPWQIRNQQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
                     LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
                     EARYELA"
     gene            7278..8195
                     /locus_tag="OQQ26_001480"
     CDS             7278..8195
                     /locus_tag="OQQ26_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HCS1856975.1"
                     /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGHKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM
                     MPLEASSLMGSIAGIAELVKDSANKRTQP"
     gene            8192..8650
                     /locus_tag="OQQ26_001481"
     CDS             8192..8650
                     /locus_tag="OQQ26_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HCS1856976.1"
                     /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVSAVITGL
                     VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV
                     LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS"
     gene            complement(8651..9058)
                     /gene="cueR"
                     /locus_tag="OQQ26_001482"
     CDS             complement(8651..9058)
                     /gene="cueR"
                     /locus_tag="OQQ26_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HCS1856977.1"
                     /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
                     NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
                     DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
     gene            complement(9183..10475)
                     /locus_tag="OQQ26_001483"
     CDS             complement(9183..10475)
                     /locus_tag="OQQ26_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1856978.1"
                     /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
                     STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
                     AVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVIL
                     VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
                     VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV
                     GYVIVIIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
                     LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
                     VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV"
     gene            complement(10478..11410)
                     /gene="glsA"
                     /locus_tag="OQQ26_001484"
     CDS             complement(10478..11410)
                     /gene="glsA"
                     /locus_tag="OQQ26_001484"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HCS1856979.1"
                     /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVA
                     IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
                     ALELHGGKPLSPLVNAGAIATTSLINAENAEQRWQRILHIQQQLAGEQVALSDEVNQS
                     EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGVN
                     PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
                     AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
     gene            11672..14176
                     /gene="copA"
                     /locus_tag="OQQ26_001485"
     CDS             11672..14176
                     /gene="copA"
                     /locus_tag="OQQ26_001485"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HCS1856980.1"
                     /translation="MSQTIDLNLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
                     GTASAEQLLETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
                     LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
                     AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL
                     WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW
                     FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEK
                     SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGT
                     VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALI
                     SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
                     DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
                     AILDKAGDMQLLQVNGFRTLRGLGVSGEAEGHALLLGNQALLNDQQVDTKAIEADISA
                     QASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
                     IAKEAGIDEVIAGVLPDGKAEAIKHLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
                     SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
                     FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
     gene            complement(14391..14732)
                     /locus_tag="OQQ26_001486"
     CDS             complement(14391..14732)
                     /locus_tag="OQQ26_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HCS1856981.1"
                     /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSTL
                     INNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
                     ARREERAKKVA"
     gene            14870..15664
                     /locus_tag="OQQ26_001487"
     CDS             14870..15664
                     /locus_tag="OQQ26_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HCS1856982.1"
                     /translation="MDLLYRVKTLWAALRGNHYSWPAIDITLPGNRHFHLIGSIHMGS
                     HDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHIS
                     QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
                     AENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNEITLPNTFSQ
                     SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
     gene            15867..16346
                     /gene="ybaK"
                     /locus_tag="OQQ26_001488"
     CDS             15867..16346
                     /gene="ybaK"
                     /locus_tag="OQQ26_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HCS1856983.1"
                     /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV
                     YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGG
                     ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
     gene            complement(16383..18035)
                     /gene="ushA"
                     /locus_tag="OQQ26_001489"
     CDS             complement(16383..18035)
                     /gene="ushA"
                     /locus_tag="OQQ26_001489"
                     /EC_number="3.1.3.5"
                     /EC_number="3.6.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HCS1856984.1"
                     /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG
                     HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
                     GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
                     QDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHM
                     GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQNPVCMAAENKKQVDYVPGTPCK
                     PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
                     YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA
                     QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
                     AQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFSATGGDGYPR
                     LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSGYEPKGEVSWQ"
     gene            18253..19473
                     /gene="fsr"
                     /locus_tag="OQQ26_001490"
     CDS             18253..19473
                     /gene="fsr"
                     /locus_tag="OQQ26_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fosmidomycin MFS transporter"
                     /protein_id="HCS1856985.1"
                     /translation="MAMSEQTQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI
                     LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS
                     GLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
                     SSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN
                     PLPRNKVVLAVSILLILIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAV
                     AAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFS
                     AILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLL
                     GMLTIFLPDNRHKD"
     gene            19711..21387
                     /locus_tag="OQQ26_001491"
     CDS             19711..21387
                     /locus_tag="OQQ26_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HCS1856986.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKSIAIPGAIAQIAVATLL
                     GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSVAALFLVRLFGHSQRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
                     KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
                     TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
                     IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
     gene            complement(21520..22824)
                     /gene="gsk"
                     /locus_tag="OQQ26_001492"
     CDS             complement(21520..22824)
                     /gene="gsk"
                     /locus_tag="OQQ26_001492"
                     /EC_number="2.7.1.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HCS1856987.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
                     DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
                     YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
                     WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            22976..23935
                     /gene="aes"
                     /locus_tag="OQQ26_001493"
     CDS             22976..23935
                     /gene="aes"
                     /locus_tag="OQQ26_001493"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HCS1856988.1"
                     /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPPWPATGTIAEQRQYY
                     ALERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
                     HDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
                     FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRNSVTRRLLGGVWDGLTQ
                     QKLQIYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA
                     AHQQPCEFKLYPGTLHAFLHYSRMMKTADDALRDGDQFFTAQL"
     gene            complement(23932..24894)
                     /gene="hemH"
                     /locus_tag="OQQ26_001494"
     CDS             complement(23932..24894)
                     /gene="hemH"
                     /locus_tag="OQQ26_001494"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HCS1856989.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
                     WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSY
                     GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
                     DYADNHDYINALVNSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL
                     ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET
                     LEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR"
     gene            complement(25026..25670)
                     /gene="adk"
                     /locus_tag="OQQ26_001495"
     CDS             complement(25026..25670)
                     /gene="adk"
                     /locus_tag="OQQ26_001495"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007706188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HCS1856990.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN
                     VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG"
     gene            complement(25850..27724)
                     /gene="htpG"
                     /locus_tag="OQQ26_001496"
     CDS             complement(25850..27724)
                     /gene="htpG"
                     /locus_tag="OQQ26_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HCS1856991.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
                     KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
                     EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
                     SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
                     QEAIAKLLRFASTYTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
                     TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
                     IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
                     "
     gene            complement(27834..28439)
                     /gene="recR"
                     /locus_tag="OQQ26_001497"
     CDS             complement(27834..28439)
                     /gene="recR"
                     /locus_tag="OQQ26_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HCS1856992.1"
                     /translation="MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLA
                     QALTRAMSAIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
                     GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
                     CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
     gene            complement(28439..28768)
                     /locus_tag="OQQ26_001498"
     CDS             complement(28439..28768)
                     /locus_tag="OQQ26_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HCS1856993.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            complement(28821..30752)
                     /gene="dnaX"
                     /locus_tag="OQQ26_001499"
     CDS             complement(28821..30752)
                     /gene="dnaX"
                     /locus_tag="OQQ26_001499"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HCS1856994.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
                     SLTDQAIASGDGQVSTPAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI
                     EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
                     GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ
                     PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKNEPAAATRARPVNNAALERL
                     ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPE
                     LAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRTSQRHLNNR
                     GAQQKLAEALSTLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNI
                     QTLRRFFDAELDEESIRPI"
     misc_feature    complement(29424..29488)
                     /gene="dnaX"
                     /locus_tag="OQQ26_001499"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00382"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="DnaX frameshifting element; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00382"
     gene            complement(30881..31432)
                     /gene="apt"
                     /locus_tag="OQQ26_001500"
     CDS             complement(30881..31432)
                     /gene="apt"
                     /locus_tag="OQQ26_001500"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HCS1856995.1"
                     /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL
                     EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
                     LGGEQRLEKQGITCYSLVPFPGH"
     gene            complement(31585..31962)
                     /locus_tag="OQQ26_001501"
     CDS             complement(31585..31962)
                     /locus_tag="OQQ26_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HCS1856996.1"
                     /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP
                     RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL
                     VILACLLFYMWRIPVIDEKQEKH"
     gene            32032..32559
                     /gene="priC"
                     /locus_tag="OQQ26_001502"
     CDS             32032..32559
                     /gene="priC"
                     /locus_tag="OQQ26_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N''"
                     /protein_id="HCS1856997.1"
                     /translation="MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRAT
                     TLQACLDEAGDNLAALCHAVEQQQLPQVAWLAEHLAAQLEAIAREAAAWSLREWDSAP
                     PKIARWQRKRIQHQDFERRLRGMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
                     HALEKIENRLARLTR"
     gene            32573..32734
                     /gene="rsmS"
                     /locus_tag="OQQ26_001503"
     CDS             32573..32734
                     /gene="rsmS"
                     /locus_tag="OQQ26_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HCS1856998.1"
                     /translation="MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKK
                     LTRDDEAEK"
     gene            complement(32946..>33783)
                     /locus_tag="OQQ26_001504"
     CDS             complement(32946..>33783)
                     /locus_tag="OQQ26_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HCS1856999.1"
                     /translation="MGSLLFAIIASMVAWALIRNLPGLLEVLLLSRLNMRQGASYAIT
                     TILNYIIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFER
                     PVRIGDTVTIGSFSGTVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTR
                     LVIRLGVAYGSDLEKVRKVLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRE
                     LRDRSRTVDELNRTIDQLCRENDINIAFNQLEVHLHNEKGDEVTEVKRDYKGDDPTPA
                     VG"
BASE COUNT         7799 a         9115 c         8873 g         7996 t
ORIGIN      
        1 taactgagga aacgtagcta aggccgaagg tttaccacct tcggccttta aaaaaaccga
       61 catgacagtt ggtttcatat ttattgccaa aatgcacact gttcatgcca gatgcggcgt
      121 aaacgcctta tccggcctac acaatcttgc aaaatcaata tattgcacgc tcttcgtagg
      181 cctgataagc gtagcgcatc aggcaatcta acacctgtca tcaccccgca aactgcctga
      241 acagcgcctt acccttaacc agtcgcgcac ccagccagcc gccgaaaagc gacagcagca
      301 gtgcaccgct gcacggcaga acaatccaca atcgccagtc tggctcccac gggaaatcaa
      361 acactttcgc ctgcaacact gccagcgccg tttccgcacc aattgcggct accaggccag
      421 aaacaaaccc aagcatggcg aactcacacc acaacgtggt acgcagcagt tttttccccg
      481 caccgagtgt gcgccacacc accagctcct gatgacgctg acgcattccc acctgcacct
      541 gtgccagcaa cagcaacata ccgcaggcgg tgaccagcac caccatcacc tccaacgccc
      601 gacttacctg ctccagcacc tgaccgacct gttttaaaat cgcgccaatg tctaacaggc
      661 taatggtcgg gaactggcgg ttgagttgcg tcaacatgcc gttgccattc tcccagcgga
      721 aactggtaag ccagctctgc ggttgcccgt ctaatgcccc ttcagggaaa ataaaataga
      781 aattaggccg cagactttcc cagtccactt tgcgcaggct ggtcacttta gcgcagaact
      841 cctgggtatc gcccataaaa gtcacggtat caccgagggc aacgtttaag cgtttcgcca
      901 gcccctcttc catcgacact tcatcggctt ttggcggcca gttaccggcg acaatcggat
      961 tatgatcggg ccgcgtattt tgccaggtaa gattgagttc gcggttaagc gcctcatctt
     1021 cattaccttc tgtcggctta tcgttaatcg ccgtcagccg cgcccgcacc accggataaa
     1081 acgattccgg gactatctga tgttccgcga ggaacgcttt tagcggtgct acctgttctg
     1141 tggcgatgtt aattaaaaag tagttcgggc tttctggagg tagctgctgc tgccagcggt
     1201 cgagcagatc gccacgcaac accagcagca gtgccagcag cataaaggag agcgaaaatg
     1261 ccgaaagctg gcttaacgtt gaccacggct gacgtaacag gcggctaacc gccaggcgca
     1321 gaggcagcga tttcagcgtc atgcggcgaa gtacattcag cagcatccag cccagcacac
     1381 cgcacagcaa agccagtact accgcgcccg ccagcaccgc ccaaagcagc atgctgccgc
     1441 ccattaatcc ggcgagcagc agcacaacca ccacactgac aatcggcaga taaaacttca
     1501 gcggccagac gttcgcgacc acatcattac gtaatacgcg taaaggctgc gttgccaaca
     1561 acaagcggta cggtcgtagc cccaccagca gcgagatgac cgtcatggtg cccagcgccc
     1621 acagccacgg ccagaggctg gctggcggta gtgcagcagg cagaacgggc ttgagcagca
     1681 ccatcaacac gttttcgaac aacaggccta tcgccccacc ggtaatggct gaaagcgtca
     1741 gcaccatcaa ccactgaccg acgattagct tacgcagttg cgctcgccca gcccccagcg
     1801 ttttgaggat cgccaccaga tcgtagcgac tgcgacagta atgattcatc gctaccgcca
     1861 ctgctgccac tgccagcagc aaggtcagaa gcgcagaaag cagtaggaac tgttgcgagc
     1921 gttccatcga tcgccccagc gcgccttcgt cctgttccag accgtaccat cgttgttcgg
     1981 gtttaagctg aggtaacaac catttctcat agccgtcgag ctggttctcg ttgccgccga
     2041 atttatagcg ccaggtgacc cgactccccg gctgcacggc tccggtttta tcgacatccg
     2101 ccagattcat catcagacgc ggagccatct ggaaggggtt aaaaccggaa tccggttcct
     2161 gaatcacttc tccggcaatc cgcaaggtgg cgtcgcccac gtcaatggtg tcgcccgttt
     2221 tcaggttaag cagtaccatc aggcgtgggg ccagcaatac gctgcccgcc tgcggtttca
     2281 ggccaggggg attagtttgc agatcgccat acatcgggta gatatcatcc accgctttga
     2341 cgttcgccag ctgcggtgtg tcgcctgcaa aggtcattgt ggcgaaagtc agctgcttgc
     2401 cgactttcag gccgcgcttt tgcgcttcct ccagccacgc ttgcggcact tcgcgtgaac
     2461 tgcgcaacgc ccgatcgccc gccataaact cacggctttg ctggcttaag cccttctcca
     2521 tgcgatcgct gatattgccc agcgccagca agcaggccac cgccaggctt agcgccagcc
     2581 agacaattaa tagcgacggc gagcgccatt cgcgccagaa ccaacgtgca atcatgcttc
     2641 ctcctgcaac tgcccgttca ccagccgtaa gcagcggtcg cagcgtgccg ccagttgcag
     2701 gtcgtgggtc accataatca acgtggtgcc atgctcacgg ttgagggaaa acagcaggtc
     2761 ggcaatttta tcgctcgtct ggcggtcaag gttgccggtg ggttcgtcgg caaacagcac
     2821 atcaggtcga ccattaaagg ctcgcgccag cgccactcgt tgctgttcgc cgccggaaag
     2881 ctgtgccgga agatgatcaa gacgtttacc cagccctaac tgttcgagca acgctttcgc
     2941 cccgttacga ctttccgcgc tactctcacc gcgcagcagc gccggaagct cgacgttttc
     3001 cagggcgtta agggtaggaa ttaacataaa cgactgaaaa acaaagccga cgtgcttcgc
     3061 gcgcaacttt gcccgcgctt cttcgtccat attatgtagc ggttgtccca ccagactcac
     3121 ttcgccactg ctgccgtcat ccagcccggc gaggatcgcc agcaaggttg acttacccga
     3181 tcccgactcg cccaccagtg cgatggtctc gccacgtttg acaaccagct caactccggt
     3241 gaggatggag agttcatgct ccccctgacc gacggacttc ttaagatgat gaacttcaac
     3301 aatgttttcc gctggcattt gcccttcctg ttcctggtcc tgttaacctt ccgtgccgcc
     3361 gcagcggaca cgttattgat tctgggtgat agcctgagcg ccgggtatcg aatgtctgcc
     3421 agcgcggcct ggcctgcctt gttgaatgat aagtggcaga gtaaaacgtc ggtagtcaat
     3481 gccagcatca gcggcgacac ctcgcaacaa gggctggcgc gccttccggc tctgctgaaa
     3541 caacatcagc cgcgttgggt gctggttgaa ctgggcggca atgacggttt gcgtggtttt
     3601 cagccacagc aaaccgagca aacgctgcgc cagattttgc aggatgtcaa agccgccaac
     3661 gctgaaccat tgttaatgca aatacgtctg cctgcaaact atggtcgccg ttataatgaa
     3721 gcctttagcg ccatttaccc caaactcgcc aaagagtttg atgttccgct gctgcccttt
     3781 tttatggaag aggtctacct caagccacaa tggatgcagg atgacggtat tcatcccaac
     3841 cgcgacgccc agccgtttat tgccgactgg atggcgaagc agttgcagcc tttagtaaat
     3901 catgactcat aaagcaacgg agatcctgac aggtaaagtt atgcaaaaat cggtcttaat
     3961 taccggatgt tccagtggaa ttggcctgga aagcgcgctc gaattaaaac gccagggttt
     4021 tcatgtgctg gcaggttgcc gaaaaccgga tgatgttgag cgtatgaaca acatgggatt
     4081 taccggcgtg ttgatcgatc tggattcacc agaaagagtt gatcgcgcag ccgacgaggt
     4141 gatcgccctg accgataatt gtctgtatgg gatctttaac aatgccggat tcggcatgta
     4201 tggccccctt tccaccatca gccgtgcgca gatggaacag cagttttccg ccaacttttt
     4261 cggcgcacac cagctcacca tgcgcctgtt acccgcgatg ttaccgcacg gtgaagggcg
     4321 tattgtgatg acatcatcgg tgatgggatt aatctccacg ccgggtcgtg gcgcttacgc
     4381 ggccagtaaa tatgcgctgg aggcgtggtc agacgcactg cgcatggagc tgcgccacag
     4441 cggaattaaa gtcagcctga ttgaacccgg tcccattcgt actcgcttca ccgacaacgt
     4501 caaccagacg caaagtgata aaccagtcga aaatcccggc atcgccgccc gctttacgtt
     4561 gggaccggaa gcggtggtgg acaaagtacg ccatgctttt attagcgaga agccgaagat
     4621 gcgctatccg gtaacgctgg tgacctgggc agtaatggtg cttaagcgcc tgctgccggg
     4681 gcgcgtgatg gacaaaatat tgcaggggtg agttgaagcg cgcgcttaag cccccatgtc
     4741 aaagaaaata tcgacaacag agagcgactc catgtccgta gaaaatattg tcaacattaa
     4801 cgaatctaac ctgcaacagg ttcttgaaca gtcgatgacc actccggtgc tgttctattt
     4861 ttggtctgaa cgtagccagc actgtttgca gttaactccg ctcctggaaa gcctcgcggc
     4921 gcagtacaac gggcaattta ttctggcgaa gctggactgc gacgcggagc agatgattgc
     4981 cgcccagttt ggtctgcgcg cgattccgac cgtgtatctg ttccagaacg ggcaaccggt
     5041 agatggcttc caggggccgc aaccggaaga ggcgatccgc gccctgctgg ataaagtgct
     5101 tccgcgcgaa gaagagctga aagcgcagca ggcgatgcaa ctgatgcagg aaggcaatta
     5161 caccgatgcc ctgccattgc taaaagacgc ctggcagttg tcgaatcaga acggggagat
     5221 cggcctgctg ctggcagaaa cgctgattgc gctgaaccgt tctgaagatg cggaagcggt
     5281 gctgaaaacc attccgttgc aggatcagga cacccgctac caggggctgg tggcgcaaat
     5341 cgaactgctg aagcaggcgg ctgatacgcc ggaaattcaa cagttgcaac agcaggtggc
     5401 ggagaatcca gaagatgccg cactggcgac gcaactggcg ctgcaactgc atcaggttgg
     5461 gcgcaatgaa gaggcactgg agttactatt tgggcatctg cgtaaagatc tcaccgccgc
     5521 agacggtcag acgcgtaaaa cgttccagga gatcctcgct gcactgggta cgggtgatgc
     5581 actggcgtcg aagtatcgcc gccagctgta tgcattgttg tattgatatt ccgttgatcg
     5641 gcacatgaac cacaacgcca gatgcgatgc tgcgcatccg gcatcgcatc atttcttctt
     5701 caattgcgtc accaccaact ggtggcgcga attataaaac ttacgatagg ttaaatagca
     5761 ggcaataatg gtcgacaagc tggcggttga gagcagcata aaggtcacca taatctgata
     5821 tttaatcgcc ttcaccggat caatcccggc aaatatcagc ccggacatca ttcctggtaa
     5881 actcactaag ccaaccgttt ttgctgaatc gaccgtcgga attaaagccg cgcgaatact
     5941 gtcgcgaatc aatatcgctg aagcctgctt cggcgtcgcg ccaagactca gtttctcctg
     6001 aatctgttgc tgttcgctaa tgacccgttg ccctaaattg ttgtaacaca accccaccgc
     6061 taccatggcg ttaccggcaa tcatcccggc gatagggatc acctgcatcg ggataaattc
     6121 aatcgaccct gagagaatca gcaccgccag ggtaattccc gccccgaccg taatggcaat
     6181 aaacgatgag ataaaagctt tagcaatata tttactgcgt ttttgcgcgt tccacgccgc
     6241 attaaagcag ataaataaca ccatcaataa tgtcaggctg gcatcatcca cgctgaaaat
     6301 atacttcagc acatagccga caataatcag ctgaattatc gctcgcccga cgctccagag
     6361 aatatctttc tccagcgcca gtttttcttt atggctaatt aagattgcca ccaccaccag
     6421 cattaatgcc agtgctaatg attcgttagt aatattatgc gagttcatag cgtgcttcct
     6481 gcatttctcc ggcatgcggt tgcagtgtaa tcactttatc cgcatgatta atttcgtctt
     6541 tatcgtgtgt cacccacagc acggcaatat tttgctcgcg cacataacga tggatcatct
     6601 cattgacgtt atgtttatta ctttcatcca gcgcactggt tatttcatcc agcaataaaa
     6661 ccttcggcat aaattgcagg ttacgaatca atgagatgcg ttgtttttca ccaccagata
     6721 gctcggcgat attcttcgtc aaaatgctgt ccggcaaagc gaagcgttcg agaaaatcga
     6781 gaaaaatggc cgggtcaggc tgctggttac ggatctgcca gggaaagatc agattatcgt
     6841 ataccgtatc gccaaacagc gtcggtgtct gggcgcagta agagacttgc tggcggtaga
     6901 tttctggctt tagtgtgctg acatcctcac cttcaaacag taacgttccg ctggttggac
     6961 tgatcaatga agcaactatt tttagcagcg tacttttgcc acaaccagaa ggaccggtaa
     7021 ttaacttaaa ttcgccagca cgcagcgaaa aattgatgtt attaagaatc ttcgtatcac
     7081 ccgccagata tcctacgttt tgtagctgaa gcaaaggact attttcctgc atcgctgttc
     7141 cctttttctg atttttacta aaaacagttt atccttcgca ggaataaggg ggaactctct
     7201 ttcagtaatc aggtataatt tgtttaatca agcagcaatt ttgctgatta tggacggtac
     7261 aacaggaggt ttttccgatg cttatcttta tcccgattct catttttgtc gcgctggtca
     7321 ttgtcggcgc gggcgtcaaa atcgtgccgc agggctatca atggacggta gaacgttttg
     7381 gtcgctatac caaaacgtta cagccggggc tcagtctggt ggtgccgttt atggatcgca
     7441 ttggtcacaa gatcaatatg atggagcaag tgctcgatat cccttcccag gaagttatct
     7501 cgaaagataa cgccaacgtt accatcgacg cagtctgttt tattcaggtg attgacgcac
     7561 cgcgcgcggc ttatgaagtc agcaatctgg agctggcaat catcaacctg accatgacta
     7621 acatccgtac cgtgctgggt tcaatggaac ttgacgaaat gctctctcag cgcgacagca
     7681 tcaactcacg cctgctgcgt attgtcgatg aagccaccaa cccgtggggg attaaagtca
     7741 cccgtattga aattcgcgac gtgcgcccac cggcagagct tatctcttca atgaacgcgc
     7801 agatgaaagc ggaacgtacc aaacgcgctt acatccttga agcggaaggg atccgtcagg
     7861 cggaaatact caaagcggaa ggtgaaaaac agtcgcaaat tctgaaagcg gaaggtgaac
     7921 gtcagtcggc attcttacag gccgaagcgc gtgaacgttc tgccgaagca gaagcccgcg
     7981 ccaccaaaat ggtatctgaa gccattgcct ccggtgatat tcaggcggtg aactacttcg
     8041 tagcgcagaa atacaccgaa gcgttacaac agatcggttc ctccagtaac agcaaagtgg
     8101 tgatgatgcc attagaggcc agcagcctga tggggtcgat tgccgggatt gccgagctgg
     8161 tgaaagacag cgccaacaaa cggactcagc catgatggag ttaatggtcg ttcatccaca
     8221 tattttctgg ctcagtctcg gcgggttgct gctggcagcc gagatgctgg gcggaaatgg
     8281 ttatttgctg tggagcggcg tgtcagcggt gattaccggc ctggtggtct ggctggtgcc
     8341 gctgggttgg gagtggcaag gggtgatgtt tgccatcctg acgctgctcg ccgcctggct
     8401 gtggtggaaa tggttgtcgc ggcgggtgcg cgaacaaaag cacagcgata gtcatttaaa
     8461 ccagcgcggg cagcagctga ttggccgacg ttttgtgctg gaatctccgc tggtcaacgg
     8521 gcgcggtcat atgcgcgtcg gtgacagttc atggcctgtc agcgccagcg aggatctcgg
     8581 cgcaggtacg catgttgaag tcattgcgat agaagggata acgctacata tccgagccgt
     8641 ctcgtcttaa tcaccctgcc cgatgatgac agcagccgga gagattttcg ataatcgggc
     8701 agtcggcgct gtcatcgcca gggcaggcat tcgccagtgc cagcagctgg tcgcgcatgg
     8761 attgcagctc ctcaatgtgt cgttcgatct ccgccacctt ctccagcgtg cgccgtttga
     8821 cgtcggcgct gtgccgctgc gggtcgttaa acagattcac cagctcgccg ctctcttcca
     8881 ggttaaagcc cacctgccgt gcctggcgca gtaaggtcag ttcgttgaga tgctgctgcg
     8941 tgtaggtgcg ataaccgttt tcgctgcgca tcggcggcgt caccagcccc ttctcttcat
     9001 agaagcgaat ggctttgctg gtcaggccgg taatttttgc tacatcgctg atgttcatcg
     9061 ttcgcgcaac gcctcctgtg ctttgttaaa gggtttcaac agatattcaa gcacgttttt
     9121 ttgccagtgc gaatatcgac cgccaccaca ataatacagg aagtactgcg cacagagaga
     9181 tgttatacgg ttttattgcg cttcatgacc attgccacaa taaggctgag taagagtgag
     9241 ccaataatcc atatcaacgc acggctaccc tgggaccaca gactgtagat aaagccaacg
     9301 atcaccaaca acatcaccaa cgtaccaacg ataagaatcg gcaacgaggc gtgaatatca
     9361 tgacgcaggc ggatcgccac cacaaacacc gccaggtagc aaatcaaaaa ggtggcgctg
     9421 gcaacgctgg cgagtgagcc taaattcagt gccgccgtca tcagcataat caacaccacg
     9481 acaatgatgt tgccccaggt actctgccgc cacagggatt tattcattag cttcggcagt
     9541 tcgcgttcgc tgcccatgtt gtccatgatg ttaaacacgg cgaacaggtt cgcgttgatg
     9601 gctgaagccg tcgccagtaa agcgccgatg atgacgatca cataacccac atgcccgagc
     9661 agcggagaag ctgcctgcgc tacggcggta tcggcatatt tttctaactc taatgccgat
     9721 acatcgctaa gcaaaaccag cgccagcgag atataaagca acgtggtaac gccaatcgcc
     9781 accagaaacg cccgtggcat aatgacctgc ggatctttca ctttatccgc cgcgttcgcc
     9841 atcatgccaa agcccgcata ggcaaggaag gttatcccga tacaggagaa gaacgcaccg
     9901 gagctggggg gcgcagagac ggaaatatgt gccggttgca gcgaccagac accggcaata
     9961 atcagtaata acaggatcat cattttaatg ccgacgagga tcacttccag ccgccctacc
    10021 gcatggttgc ttaaggagtt gaaaagcgtc atcaccgcaa tgatccccaa cgcgtagagc
    10081 aaaataaggt gctcctcctg gctgccttca tgcaaaaact gcacggcata agcgccaaaa
    10141 gcacgggcga ccatggcgat gctcaccgcc agcgtcaaca agtacaataa cgagagtgcc
    10201 agcgaaaaga cgccgttgcc taatccgcga cgaaagaagt cgataatacc gccattgctg
    10261 ggatagctcg cccccaggcg cgcataggca taaccggaaa acatcgccac aataccgcca
    10321 aaagcaaagg cgacccaggt cgaggcttcc attagcaacg cagcctgccc cagcagcgcg
    10381 aagatccccg cccccaccat tgccccaata ccgatggaaa cgacgttcca tagaccgagg
    10441 ggtttgttac cgttattacc ttccgtgttc atcatgatca gcccttaaac acgttatagc
    10501 cgagttgctt agcgaccgat gccaccattt tttgaccgcg aacactgttg ccttcttcgt
    10561 ccagcggtgg tgagaacgcg gcaattccca tcacgccagg gacgaccgcc agaataccgc
    10621 cacctacacc gcttttgccc ggtaaaccaa cgcgatacgc ccagtcaccg gagcgaccat
    10681 acagcccttc catcatcatt tcggccagaa tgtacggcac gttgtcggcc tgaagaacgc
    10741 gtttatgcgt caacggattc acaccacccg ccgccagcgt cgcgccaagc gttgccagtt
    10801 caacagtatt gatgagcgta gagcactgac gggtgtacac gtcacaggct tccattgcat
    10861 cacaatagag atatccggcg gagtacagca gccaggcaat ggcccggtta tggaagttgg
    10921 ttgtttgttc cgactggttg acttcgtcag agagcgctac ctgctcacca gccagttgct
    10981 gttggatatg taaaattcgc tgccagcgtt gttcggcgtt ttcagcgtta atcaggctgg
    11041 tggtggcaat agcgccagca tttaccagtg gcgaaagcgg tttgccgcca tgcaactcta
    11101 aggcgataac tgagttaaag ggcaatccgg tcgggtcagc gccaattttg tcctgtaccg
    11161 cctgcgggcc gacatcttct aacgcaaggg ctaacgtaca gactttagag atggattcca
    11221 gtgcaaagcg gtaatcactg tcacccgcac tatagacgtt gccatcgcag gtcacgatag
    11281 ccactgccgc cagttgacct ggtacattcg ccagaaaggg aatgtaatcg gcattttgtc
    11341 cgccgttaag tgagtgaaat tgggtgtaag cctgatccac tgcctgctgt aatttgtttg
    11401 catctaacat cttttgttaa ctccttttta tagatgcggg aggtaattcc tcaccccggt
    11461 gccgattttc aggcatcctg atttaactta gcacccgcaa cttaactaca ggaaaacaaa
    11521 gaaataaatg tctaatcctg atgcaaatcg agccgatttt ttaatcttta cggactttta
    11581 cccgcctggt ttattaattt cttgaccttc cccttgctgg aaggtttaac ctttatcaca
    11641 gccagtcaaa actgtcttaa aggagtgttt tatgtcacaa actatcgacc tgaacctgga
    11701 cggcctgtcc tgcggtcact gcgttaaacg cgtgaaagaa agtcttgaac agcgcccgga
    11761 tgtggaacaa gcggatgtgt ctatcactga agcgcacgtt accgggactg ccagtgcaga
    11821 acaactgctc gaaaccatca aacaagcggg ttatgacgca tctgtaagcc acccaaaggc
    11881 taaaccgctg gcggagtcat caatcccgtc ggaagcactg acagcggttt ctgaggcgct
    11941 tccggcagcg accgccgatg acgatgacag ccagcagttg ctgctgagcg gcatgagctg
    12001 cgccagctgt gtcacccgcg tacaaaatgc gctgcaaagc gtaccgggcg tcactcaggc
    12061 acgggtaaac ctggcggagc gtactgcgct ggtgatgggc agtgcctccc cacaagattt
    12121 agtgcaggcg gtggaaaaag cgggctacgg cgcggaagcg attgaagatg acgcgaaacg
    12181 ccgcgaacgc cagcaagaaa ccgccgtcgc tacgatgaag cgcttccgct ggcaggcaat
    12241 tgtcgcactg gcggtgggta tcccggtgat ggtctggggg atgatcggcg ataacatgat
    12301 ggtcaccgcc gacaaccgca gcctgtggtt ggttatcggc ctgataaccc tggcggtgat
    12361 ggttttcgcc ggcggccatt tttaccgcag tgcatggaaa agcctgctga acggtgcagc
    12421 gacgatggat acgctggtgg cgctgggaac gggcgtggcg tggctctatt cgatgagcgt
    12481 caacctgtgg ccgcagtggt tcccgatgga agcgcgacat ctttactatg aagccagtgc
    12541 gatgattatc ggtctgatta atctcggtca tatgctggaa gcgcgcgcac gtcagcgttc
    12601 ttcaaaggcg ctggagaaat tactcgattt aactccaccg acggcgcgcc tggtaactga
    12661 cgaaggtgaa aaaagcgtgc cgctggcgga agtgcagcca ggtatgttgc tgcgcctgac
    12721 gaccggcgat cgcgtgccgg tagatggcga gattacccag ggcgaagcat ggctggatga
    12781 agcgatgctg acgggcgaac ctatcccgca gcaaaaaggc gaaggcgata gcgtccatgc
    12841 cgggacagtg gtgcaggacg gtagcgtgct gtttcgcgcc agtgcggttg gcagccatac
    12901 cacgttatca aggatcattc gcatggtgcg ccaggcccag agcagcaagc cagaaatcgg
    12961 tcagctggcg gataaaatct cagccgtatt tgtgccggta gtagtggtta ttgcgctgat
    13021 cagtgcggca atctggtatt tctttggtcc ggcaccgcag attgtctata ccctggtgat
    13081 tgccaccacg gtactgatta tcgcctgccc gtgtgcgctg gggctggcga cgccgatgtc
    13141 gattatttcc ggcgtcgggc gggcggctga gtttggcgtg ctggtacgtg atgctgacgc
    13201 gctgcaacgc gccagtacac tcgataccgt cgtgttcgat aaaaccggga cgctgaccga
    13261 agggaagccg caggttgtcg cagtgaaaac gtttgctgat gttgatgaag cgcaggcatt
    13321 gcgtctggcg gcggcactgg agcaaggttc cagccatccg ctggcacggg cgatcctcga
    13381 taaagcaggt gatatgcagc tgctgcaggt caacggtttc cgcacattgc gcgggctggg
    13441 cgtgagcggt gaagctgaag gtcatgcgtt attgctgggt aatcaggcgt tgttaaatga
    13501 tcagcaagtc gatactaaag cgattgaagc cgatatttca gctcaggcat cgcaaggagc
    13561 aacgcctgtg ctgctggcgg ttgacgggaa agcggtagcc ctgctggctg tacgcgatcc
    13621 attgcgtagt gatagcgtgg cggcgctgca acgcctgcat aaagcgggat atcgtctggt
    13681 gatgttgacc ggggataacc caaccaccgc caatgcgatc gccaaagaag cagggattga
    13741 tgaggtgatc gccggggtgc tgccagacgg taaagccgaa gcgatcaaac atctgcaaag
    13801 tgaaggacgt caggtggcaa tggtgggcga cggcattaac gacgcgccag cgctggccca
    13861 ggcggatgtc ggcattgcga tggggggcgg cagtgatgtt gccattgaaa ccgcggcgat
    13921 taccctgatg cgccatagcc tgatgggcgt tgcggatgcg ctcgctattt cccgcgcaac
    13981 gctgcgcaac atgaagcaga acctgctcgg cgcgtttatc tacaacagta tcggtattcc
    14041 ggtcgccgcc ggtattttgt ggccgttcac tggaacgttg cttaacccgg tagttgccgg
    14101 agcggcaatg gcgctctcgt cgattaccgt agtgagtaac gccaaccggt tgctgcggtt
    14161 taaaccgaag gaataagtac gtcattgcgg atgcgctgct ttagggcggc gcatttggca
    14221 tcgacgcatg actgccggat gcggcgtaaa cgccttatcc ggcctacggt tcaggcacag
    14281 gtttgtaggc ctgataagac gcgtaagcgt cgcatcaggc aatggtgctc ggatgccgga
    14341 tgcggcgtga acgccttatc cggcctacga gatgaagcga tgttttggcc ttacgcgacc
    14401 ttttttgcac gctcttcacg gcgtgccaaa tattcagcca ctgtttcaat ccgtcccaat
    14461 tcttcctggg tgcgcatgtt gttttcaact tcccaaagat caactgccgc ctggaggttt
    14521 agccaaaaat cgactgtggt atcaaaaact ttcgccagac ggaatgccat ctcagtggtg
    14581 agtttacgat tattattgat cagtgtactg acgctattac gatgaacatg cagcaactct
    14641 gctaactcat tgattttcaa atcgagcggt tccagatatt catagagaag aatatctccg
    14701 ggtgtcgtcg gttttcttgt tgcctgtttc atagttttta actgttgctt ccctgtgaat
    14761 agcgatacaa gaacatactg aatcatacaa acacattaaa caagtcccca actccatttg
    14821 cgccatccct ccccgcgcgc tagcatgata tttcacaaag ggaggtcgta tggatctgtt
    14881 gtaccgggta aaaacgcttt gggccgcgct gcgcggtaat cattactcct ggcctgccat
    14941 cgatatcacc ctccccggca atcgccattt tcatctgatt ggcagtattc atatgggtag
    15001 ccacgatatg gctcccctac ccacccgttt gctcaaaaag ctcaaaaacg ccgatgcgct
    15061 gatcgtcgag gctgatgttt ccaccagcga tacgcctttt gctaatttgc ctgcctgcga
    15121 ggcgctggaa gagcgcatta gcgaggagca actccaaaac ctgcagcaca ttagccagga
    15181 gatgggcatt tctccctcac tcttttctac ccaaccgctg tggcaaatcg cgatggttct
    15241 tcaggcgacg caggcacaaa aactggggct gcgggcagaa tacggtatcg attaccagct
    15301 attgcaggcg gcgaagcaac aacataaacc cgtgattgaa ctggaagggg ctgaaaacca
    15361 gattgccatg ttgctccagc tccctgacaa aggactggcg ctgctggacg atacgctgac
    15421 ccactggcat accaacgcac ggttgctgca acaaatgatg agctggtggc tgaatgcacc
    15481 tccgcaaaat aatgaaataa cgctgcccaa tacgttcagt cagtcgctgt acgatgtgct
    15541 gatgcatcag cgaaatctcg cctggcggga taaattacgc gccatgccgc cggggcgata
    15601 tgtggtcgcg gtcggtgcac tacacctgta tggagaaggg aatttgccgc aaatgttgcg
    15661 ctaaaaaaat ggccaatatc gctattggcc cgtcaaagag gaatttcatt tttttattat
    15721 tatgccgtca ctttaagcga cggtgtaact cgattgtcgc tcaatctcac catcctgcca
    15781 atactcttag gcaagatgac tctttttttg gaccgccatc aggcgtatgc ttgcttcgtt
    15841 tttttgttta aggcaggaaa attaccatga cacccgcagt taaattactc gaaaaaaaca
    15901 agatttcgtt tcaaatccat acctacgagc acgatccggc tgaaaccaat tttggcgatg
    15961 aagtcgtcaa aaaattaggt ttgaatccgg atcaggtcta caaaacgctg ctggtggcag
    16021 tgaacggtga tatgaaacac cttgccgtgg ccgttacgcc ggtcgcaggt caactggatc
    16081 ttaaaaaagt agcaaaagca ctgggtgcca agaaagttga gatggccgat ccgatggtcg
    16141 cgcagcgttc gacgggatac ctggttgggg ggattagccc actggggcag aaaaaacgtc
    16201 tgccaacgat tatcgacgcc cccgcacaag aatttgccac tatttatgtt tccggcggca
    16261 agcgcggact ggatatcgaa ctggcggcag gcgatctggc gaagatcctc gatgccaaat
    16321 ttgctgatat cgcccgccgc gattaagcat tgtgccggat gcgaacatcc ggcactttcg
    16381 gattactgcc agctcacctc acctttcggt tcataaccac tcacatccag cggcgagctt
    16441 ttctggatat acgctttcag cacttcggca tcaataaagc cggtattcac atagcccggt
    16501 ttgttatcaa ggcgcggata gccatcaccg ccggtggcac tgaagtttaa tgtcgccatg
    16561 cggtaagttt tcgccggatc gaccggttca cctttgattt tcaggtcgtt cagtttgccg
    16621 tctttcgcca caaagctaac gttagcaaat tgcgggtagg cacctgaatc tggcttcatt
    16681 tgtgcgacgg cggtcaggta atcaatcacc tctttaccgg tcatgtcggc atacaccacc
    16741 acattgccga atggctgcac tttcagcacg tttttatagc tgatatcgcc tgcttcgata
    16801 gaatcacgaa ttccgcctcc actcatcacc gcaaagtcag caccagtgcg atccatttgg
    16861 gctgccagaa tcaaccgccc catattggtc tgtacaaaac gcactttgtc acgatcgcct
    16921 tccagacgac cattggtttc gcctattttc acttccagct gcgctttgcc tttgttctgg
    16981 aacggtgata acagcgagat catttgctgg ttttcagcga tttcaggagt gtaaagcacg
    17041 cgctcgcttt tcccgtcttc ccaggtcact ttcttcttca ggttcaccgg aatcagctgg
    17101 tagttaacca ttttcatttc gccattacga aactcaaaat cagcccgtcc cacgtatttg
    17161 ccccactcat gcgcctgcac aatccagatg ccgttttgtt gatctggttt gcatggcgta
    17221 cccggcacgt aatcgacctg ttttttgttt tctgctgcca tgcagaccgg attttgcgag
    17281 tgaccaccga cgatcatcgc cagcgatccg gcaggcagcg cgcgtgccat ctccacatcg
    17341 cccggtgcgt tagagccgtg ctcaccatta tcgtaatgcc ccatatgggt cgccgcgata
    17401 ataatgtctg gcttttctgt ctgttgcagc tcctgaatca ccagcttcgc ttcatcggcg
    17461 ggcttacgaa attcgatatc agtgaagtat tccgggttac caatttttgc tgtgtcatcg
    17521 gttgtcagcc caatgacggc aattttcaga tcctgacgct taaacagcgc ccacggttta
    17581 aacaggcgct cgccggtact tttctggtag atattggcgg aaagcaacgg gaactttgcc
    17641 cacttttcct gctggcgtaa tacggtgagc gggttatcaa attcatgatt accgatcgcc
    17701 atcgcgtcat agcccaccag attcataccg cgaaaatcag gttcggcatc ctgtaagtca
    17761 gactcgggca cgccagtgtt aatgtcgcca ccggaaagta gcagcacgct accgccttca
    17821 gccgcaacct ctttgcggat accatccacc agcgtttttt gcgccgccag accatattcg
    17881 ccatattcat tgcgccaaaa atgcccatga tgatcattgg tatgcagaac tgtaattttg
    17941 taagttttat cctgctcata cgccagagca gtttcactcg ccagtgtaaa tgtggttaac
    18001 agtgctaacg ccacgccccg ctgcaataat ttcatacttc tctccctgac ctgatttcaa
    18061 cgtgttgaaa aatagtatga cgcgacatca taggcaagtc tgcgtccggt gaagataaat
    18121 ctgcatccag attagaaatt ctgtattcgg cgttgagact tccttcaggc gacgcataca
    18181 ggtatgttag tcgggtaata atcacaaata agatcattct ttacatcgca accctgaaaa
    18241 agtgactttc ctatggcaat gagtgaacaa acccagcctg tggcgggcgc ggctgcgtca
    18301 acgaccaagg cccgaacatc gtttggtatt ttaggtgcta tcagcctctc acatctgctg
    18361 aacgacatga tccaatcgct gattctggcg atttatccgc tgcttcagtc agaattttct
    18421 ctgacattta tgcagattgg catgataacc ctcaccttcc aactcgcctc ttcgctactg
    18481 caaccagtgg tcggctactg gaccgataaa tatccgatgc cgtggtcgtt gccaattggc
    18541 atgtgcttta ccttaagtgg tctggtgctg cttgcgctgg cgggcagttt tggcgcagtt
    18601 ctgctggcgg cggcgctggt cggtaccggt tcatcggtct ttcatccgga atcttctcgc
    18661 gtggcccgta tggcttccgg cgggcggcat ggcctggcac aatctatctt tcaggtcggc
    18721 ggcaactttg gcagttccct gggacccttg ctggcggcgg tgattatcgc gccttatggc
    18781 aaaggcaacg ttgcctggtt tgtgcttgcg gcactgctgg cgatcgtggt gttggcgcaa
    18841 attagccgtt ggtactcggc acagcaccga atgaataaag gaaaacccaa agcgacgata
    18901 atcaatccac tgccgcgcaa caaagtggta ctagcagtca gcattctgtt aatcctcatt
    18961 ttctcgaaat atttctatat ggcgagcatc agcagctatt acacctttta tctgatgcaa
    19021 aaattcggat tatctatcca gaatgcccag cttcatctgt ttgccttcct gtttgccgtt
    19081 gcggcaggta cggtgatcgg cgggcctgta ggggataaaa ttggacggaa atatgtgatt
    19141 tggggctcta tcctcggcgt tgcgccgttt acgctgattt taccctacgc cagcctgcac
    19201 tggacggggg ttttaacggt gattattgga tttatcctcg cttcggcatt ctctgccatt
    19261 ctggtttacg ctcaggagct gcttccggga cgtatcggta tggtttctgg actctttttc
    19321 ggttttgctt ttggcatggg aggtctggga gcggcagttc tggggcttat cgccgatcac
    19381 accagcatcg agttagtcta taaaatctgt gctttcctgc cactattggg gatgttgacc
    19441 atattcctgc ctgataaccg gcataaagac tgatttcatt gcagccaaag gcaaactttg
    19501 gctgcatcgt tttacagtcg ccataagcct ttcctctgtt aaaccacctt ctgttttccg
    19561 atccgtgctt tttttgcagc taattccatt tttctgcaaa attcaacaat tattcataaa
    19621 catcatcaat gaaattgtca taaactatta cctgtaattt tggttttccc ggccaaaaat
    19681 ggacaataac caccaggaaa aggagacgga atgcatcacg ccaccccgct tatcaccacc
    19741 attgttggcg gccttgtgct cgcctttatc ctcggcatgc tggccaataa actacgtatt
    19801 tctcctctgg tgggatatct gttagcgggt gtgctggcag gaccattcac tccgggcttt
    19861 gttgccgata ccaagcttgc gccggaactg gctgaactgg gcgttatttt gctgatgttc
    19921 ggcgtcggtt tgcatttttc gctcaaggat ttgatggcgg taaagtccat cgccattccc
    19981 ggcgcgatcg cccagatagc cgtggcgacg ctgctgggta tggcgctctc cgccgtgctg
    20041 ggctggtcgt taatgaccgg tatcgtgttc ggcttatgtc tttccaccgc cagtaccgtg
    20101 gtgttactgc gcgcacttga agaacggcaa ttaatagaca gtcagcgtgg gcaaatcgcc
    20161 atcggttggt tgattgtgga agacctggtg atggttctga cgctggtgtt gctgcccgca
    20221 gtggcaggaa tgatggaaca gggcgatgtg ggctttgcca ctcttgcagt cgatatgggg
    20281 atcaccatcg gcaaggtgat cgcatttatc gccattatga tgctggtagg tcgccgtctg
    20341 gtgccgtgga ttatggcacg cagcgcggca accggttctc gcgagctgtt taccctgtcg
    20401 gtgctggcgc tggcgttagg gattgccttt ggtgcggtag agctgtttga tgtctccttt
    20461 gcactcggtg cgttctttgc cgggatggta ctgaacgagt ctgaactgag tcaccgtgcc
    20521 gcccacgata cgttgccatt gcgcgacgcg tttgcggtgc tgttttttgt ctccgtcggg
    20581 atgttgtttg atccgttaat tctgattcag caaccgctgg cagtgctggc gacgctggca
    20641 attattctgt ttggtaaatc ggtcgcggcc ctgttccttg tgcgtctgtt tggtcactcc
    20701 cagcgcacgg cattaaccat cgccgccagc ctggcgcaga ttggtgagtt cgcgtttatc
    20761 ctggcgggac tgggaatggc attgaattta ctgccgcagg ccggacaaaa cctggtactg
    20821 gcaggggcga tcctgtcgat tatgctcaac ccagtactgt tcgcactact ggagaaatat
    20881 ctggcgaaga ccgaaacgct ggaagagcag acgctggaag aggcaatcga agaagagaag
    20941 caaatcccag tggatatttg caaccatgcg ctactggttg gttacggtcg tgtaggcagc
    21001 ctgttggggg agaaattgct cgcctctgat attccgctgg tggtgattga gacgtcacga
    21061 acccgtgttg atgagctgcg agagcgtggg gtccgcgctg tattgggcaa tgcggcgaac
    21121 gaagaaatta tgcaactggc gcatctggaa tgtgcaaaat ggctgatcct gacgatcccc
    21181 aacggttatg aagcgggtga gattgtggca tctgcccgcg cgaaaaatcc ggatattgag
    21241 attattgccc gcgcccatta tgacgatgaa gtggcgtata tcaccgaacg tggcgcgaat
    21301 caggtagtga tgggtgaacg tgaaattgcc cgtactatgc tggaactgct ggaaacgcca
    21361 ccggcgggtg aagtggtgac ggggtaaacg gtggttgccg gatgtaaaat atgaaaaata
    21421 tgtaggcatg ataagacgcg ccagcgtcgc atcaggcatc gagagccaaa tgccagatgc
    21481 ggcgtgaacg ccttatctgg cctacgaacc gacgataact taacgatccc agtaagactc
    21541 ttccaggctg tcttcacgct ccggcaagcc gcgcgttaaa cgaggtgaat gctggttcag
    21601 tacctgatag ctcacacggt tagcatattt acacacctgc gctaacgatg aataagttaa
    21661 ccaggtgaat ttatgtttgc tggagtttgg tacgttgcta cgatggtagc tgttggcggt
    21721 aatgtcatgc agcaacgctg ccaatgcacc atcccccgct ccattagtgt tcatgatttt
    21781 ttccggcccg cccatgtacg gcgcaatgtg cgaatataca cgcagcggat tctggcaatc
    21841 cttgtggcgc atggcgcggc taaactcata ctggttgaat tccgctatag cgcccggcag
    21901 cagcggatgc tgggttttac gtttcgcttc gtcttcggta aagcccgcca tatacaagcc
    21961 gattggcccg gcggtgcaca gcaccagatc tacccagtcc agcgccttgt cagatgccaa
    22021 caacggatcg ctttctccgg tcaacgcttc ggcttcatct tcgttcatcg caaggataga
    22081 aacgtggtct ttgaggaatt gctgccacca ctgcggattc tcggcaatga caaacttagt
    22141 tcccagcgtc agcaccaccg gtacgttata tttcttcgcg tactcaatgg ctttcatggt
    22201 tgcttccggc atgggttcac ccggcttgca acgcaccaga taagaggtga gaaccagagc
    22261 cgaggctccg gcaatcacat cttccggaat actttcagcc cgcagctggt tcatgtggcc
    22321 agggctgata gcaaaggtac gttccccgga ctcgccaatc agcgtaaagc aacgaccaat
    22381 cgggccatcc acgccttgca gatagttaag atcggtacgg ctggaggtgt tacacaggta
    22441 acgataggca taactgccaa tttcaatatt gctgcacatg acgcccagca gcaccgaacg
    22501 gtcgtccgcg agcaccgagt agttgtgcat ggtgttacca atggtgcccc ccgcaaactg
    22561 atgggtaatc aggtttttct gttttagctc ctgataaagc gcttcggcta cgtcatcctc
    22621 aatcaccagt gaatgcccgg cgcttaatcc ataacgctca ataaattcat catccacttt
    22681 cgcttcaata tcgaccaacg tttgatcgat acccactacc caggcggcgc tggtttcgtt
    22741 ttctggttgg aattgctgaa gcagcggatc gcgtgcattt acagggaagt aatgtttgga
    22801 tttacgttta ccgggaaatt tcatggttgt ttttacgggt ggttaactga gcggcgaatg
    22861 ttaacacaat ctgacgggag cgcgcgagac gcagccagtt tcaatatcag caggcgggat
    22921 cgcattttca tggcagtggt tccttacaat gacgcaattt gaaaggagtt tttgtatgaa
    22981 gccggaaaac aaattacccg ttctggacct tatttctgct gaaatgaaga ccgttgtgaa
    23041 tactcttcag ccggatttac cgccctggcc cgctacggga acgattgctg agcaacgaca
    23101 gtattacgcg cttgagcgcc gattctggaa tgcgggcgct ccagaaatgg caaccagagc
    23161 ttacatggtt ccaacaaaat atgggcaggt ggaaacacgt ctcttttgtc cgcagccaga
    23221 tagcccggcg acgctatttt atttgcatgg cggcggtttt attctcggca atctcgatac
    23281 ccacgatcgc atcatgcgcc tgctggcgag ctacagccaa tgtacggtga ttggcattga
    23341 ttacaccctt tcacctgaag cgcgttttcc gcaagcgata gaggaaattg tggctgcctg
    23401 ttgttatttc caccagcagg cggaagatta tcaaatcaat atgtcccgca ttggctttgc
    23461 cggtgattcc gcaggtgcca tgttggcgct cgccagtgcg ttgtggttgc gtgataaaca
    23521 gatcgattgt ggtaaagttg cgggcgtttt gctgtggtat gggctttacg gattacggaa
    23581 ttccgtgact cgtcgtctgt tgggcggtgt ctgggatggc ttaacgcaac agaagttgca
    23641 gatatatgaa gaggcgtatt taagcaacga cgcggaccgc gagtcgccgt attactgtct
    23701 gtttaataat gatctcactc gcgaagttcc gccctgtttt attgccgggg cggagttcga
    23761 tccgctgctg gatgacagcc gtctgcttta ccagacgtta gcggcgcatc agcagccctg
    23821 tgagttcaaa ctctacccag gcacgctgca cgcctttttg cattattcac ggatgatgaa
    23881 aaccgcggac gatgctcttc gcgacggcga tcagttcttt accgctcagc tttagcgata
    23941 cgcggcaaca agattagcca tcatttcgat atgttccggt gtggcattaa gcgccggaat
    24001 atattcgtat tttttcccgc ccgcaccgag gaagacctca cggttttgct cggcaatctc
    24061 ttccagcgtc tccagacaat ccgcagcaaa gcccgggcac atcacctgaa tatgacctac
    24121 gcctttttct ccaagcattt tcagcgtttc gtcggtataa ggcatcagcc agggttcccg
    24181 gccaaagcgc gactgaaagg tcatcatcac tttttccggt gccatcccca atgcggaagc
    24241 cagttcgcga gtcgttgtgc ggcaacgttg cgggtaatca tcgccttcat ctgcataacg
    24301 ctggggaatg ccatgataag agagcagcag cagatccggt tcgccatgtt tggcaaaaga
    24361 agcgcgtacg ctgttcacca gtgcattaat gtaatcgtgg ttatcggcgt aatcacgtat
    24421 aaacgatatc cccggaatgc tacgtttgcg cgccagaatg cgtgccagtt catcccatac
    24481 cgcaccgacc gtagaacagg agaattgcgg ataaagcggc agcaccacaa tatgatctac
    24541 atgctctgcc aggagttcat ctacggcgct ttccagtgat ggcgagccgt agctcattcc
    24601 cagcgctacg ggcgtctccg gtaaacgttg tgccagcgcc tgctgttgct ggcggctgta
    24661 aaccatcagc ggcgagccac cttccatcca gacagaggca tacagcttcg ccacacgcgg
    24721 cgagcgcagc ggcaaaatca cgccgcgcag caatggccac cataacaacc gtgaggtatc
    24781 aaccacgcgt ctgtcgctta aaaattgttt cagatagcgt tttaccgctt caggtgtggg
    24841 ggcatcgggc gtacccaggt ttgccagcag gataccggtt ttagtctgac gcattaccgc
    24901 ctcttatcga ttcaacttgt tgataattgt agcggaaaag tgaagaagaa gaactaattg
    24961 ctgtaagagg tattgcctga ggaggatgag cagacctgcc cgaaagcaga tctgctgcgg
    25021 cttgattagc cgaggatttt ttccagatca gcgcgaactt cagcaaccgg cttggtgccg
    25081 tcaactttcg cgtatttggt gttacccgct tccgcttctt tggagtagta gccgatcaac
    25141 ggtgcagtca tctgatggta ttcaaccaga cgtttacgca cggtttcttc ctgatcgtct
    25201 ttacgggtag tcagttcttc accggtaacg tcgtctttgc cttctacttt cggcggattg
    25261 aatttaacgt gataaacacg accagacggc gcatgaacgc ggcggcctac gatacgatca
    25321 acaatcagtt cgtccggtac gtcgaattcc agaacgtaat caacattgat gcccgcttct
    25381 ttcatcgcgt ctgcctgcgg aatggtacgc gggaagccgt ccaacaggaa accattacgg
    25441 cagtcttcct gagcaatgcg ctctttaacc agcgcgatca ccagttcgtc ggtgaccagt
    25501 ttgccagcat ccataatgtc ttttgcttgt ttacccagct cggagccaga tttgaccgca
    25561 gcacgcagca tatcgccagt ggagatttgc ggaataccat atttctccat gatgaactga
    25621 gcctgagtcc ctttccccgc gcccggagcg ccaagcagaa tgatacgcat tgcgaaaatc
    25681 cccttaaaat gtgtcgaatt ttttgaaaaa gcgataaacg ataccaccaa caggcgattg
    25741 cctcaagaaa ggcacctgag gctgaaacgg ttaatggcga gataatttgc ggaaagtgca
    25801 gatgatgaaa agaaaatgcc ggatgacacg aaggtcatcc ggcattacat caggaaacca
    25861 gcagctggtt catacgacga ataaacaggt tcggatcttc cagcgtgccg cgttctgcca
    25921 gcagcgcctg atccagcagc agttctaccc actcgctgaa ctttgcttca tcttcagtat
    25981 ctgccgcgcg tttcaccagt acgtgatccg ggttcagttc gaagatgtat ttcacttctg
    26041 gcactttctg gcccgccgca gcgaacagtt tcgccatctg agtgctcatt tcgtccgcgt
    26101 cggtcgaaac gatcgctggc gtatcggtca gacggtgagt cagacggaca tctttcacgc
    26161 gctcgccgag cagggctttc acacggtcga tgaacggagt cagtgctttc tccgcttctt
    26221 tcgcgctctc atcaacttcg tcagccagtt tttccagcga ctcgtcaact ttagacaccg
    26281 actggaacgg tttaccgtcg aactcagtca gatagttcat catccactca tcgatgcggt
    26341 cggaaagcag cagaacttcg atgcctttct tacgcagcag ttccaggtgc gggctgctct
    26401 tcgctgccgc atagctgtct gcagtgatgt agtagatttt ctcctgccct tctttcatgc
    26461 gggaaacgta gtcttccaga gacacggtct gcgcagaaga atcggtataa gtagaagcaa
    26521 aacgcagcag tttggcgatc gcttcctggt tagcgaaatc ttccgccgga ccttctttca
    26581 gtaccaagcc aaactgttgc cagaaggtct ggtatttttc cgcgtcgtct ttcgccagtt
    26641 tttccagcat ttgcagcaca cgcttggtca gcgcattgcg caggttacgc gttaccgtgc
    26701 tgtcctggag gatttcacgg gaaacgttca gcggcagatc gctggagtca atcagaccac
    26761 gcacgaagcg cagatagttc ggcatgaact gttctgcgtc gtccatgatg aacacacgct
    26821 ggacgtacag tttcaggccg tgtttatgat cacggttcca catatcccac ggagcctggg
    26881 acgggatgta cagcaggctg gtgtactcct gcttaccttc aacgcggttg tggctccagg
    26941 tcagcggatc gttaaagtcg tgggcgatgt gtttgtagaa ctctttatac tcttcatcgg
    27001 tgatttccga cttgttacga gtccacagtg cctgcgcttt gttgattttt tcccaggaga
    27061 taacggtttc gccatctttc tcttcgcgtt tttcgatctc taccggcagc gcgatatggt
    27121 cggagtattt gctgatgatg gaacgcacgc gccagtcatc gaggaactcg tcttcgcctt
    27181 cacgcagatg cagggtgatt tcagtaccac gatcttcttt ggtgatgtcg gcaacggtat
    27241 attcaccttc gccagccgat tcccagaaga cgccgttttc tggtttttcg cctgccgcgc
    27301 gagtacgcac ggtcactttg tcggccacga taaacgcaga gtagaaacca acaccaaact
    27361 gaccgatcag ctggctgtct ttcgcctggt cagaacccag ggattcgagg aatgatttgg
    27421 taccggattt agcgatagtc cccagatggt caatcacttc gtcgcgggtc atccccacgc
    27481 cgttatcgga gatggtcagc gtgcgcttgt ctttatcgaa agagacacga acgcgcagtt
    27541 cgccatcacc ttcgtacagg tccgggttag atagcgcacg gaaacgcagc ttgtccgccg
    27601 catcggaggc gttagagata agctcacgca ggaagatttc tttattggaa tagagagaat
    27661 ggatcatcag gtgcagaagc tgtttcactt ctgactgaaa accacgagtt tcttgtcctt
    27721 tcatgtaggt ctacctcaat aatgccattt taaggttaaa aacaggatga gggagagatg
    27781 gggacaaggg agaataattt caagcgagag ctggtgatcc tgctctcgtt tgcttaaaaa
    27841 cgaatcttat gacgcccggc aagggagtgt gacagcgtgg tgccatcgac catttccagt
    27901 tcgccgccaa ccggtacgcc atgagcgatt cggctggctt ccacgtcata ttgcgcgcaa
    27961 agctcggcaa tgtagttagc ggtagcttca ccttcaaccg tgggattggt ggcgaggatc
    28021 acttcagtga ttttttcctc tgccagacgc tgttccagac gatcaagccc gatatcatcc
    28081 ggaccgatgc cgtccagcgg tgacagatgc cccatcaaca caaaataacg accagaaaac
    28141 tgccccgtct gctcaatggc gtagatgtcc gccggactct ccaccacaca gatttgaccg
    28201 ttttcctgac gacgcggatt cgaacagatg ttacagactt cctgttcggt gaaagtgcgg
    28261 caatcggcgc agtggccgat tgccgacatc gcccgggtga gcgcctgcgc cagacgcatc
    28321 ccgccgctac gatcgcgctg aagcagcgtg aacgccatac gctgcgccga cttcgggcca
    28381 acgcccggca gacagcgcag tgcttccata agctgtgtta acagcgggct ggtttgcatc
    28441 agaacggcat cttaaagcca ggcggcagct gcattccgga ggatacagag gccatttttt
    28501 ctttctgcgt ttcttcaata cgacgtgctg cgtcgttgaa tgctgcagcc accaggtctt
    28561 ccagcatctc tttgtcgtct tccagcaggc tcgggtcgat ctctacgcga cggcagttgt
    28621 gtgcaccgtt gatggtcact tttaccagac ctgcgccaga ttcgccggtg acttccagct
    28681 gcgcgatctc ttcctgcatt ttctgcattt tttcttgcat ctgctgggct tgcttcatca
    28741 ggttacccag accgccttta ccaaacatag gtttctctct caatcacgtt aaggatgacg
    28801 aacgtaagct gtgcttacga tcaaatgggg cggatacttt cttcatccag ctccgcatcg
    28861 aaaaaccgac gcagggtctg aatattatta tccgcaataa tggactcgcg cgcctgcgca
    28921 agtttttctt cgtatatcgc ctgacgccat tccagcggcg tacgcaccgc gggattatca
    28981 tcttcaacga tagtcagttc aaccgttgaa ccttttaacg tgctcaacgc ttcagccagt
    29041 ttttgctgtg cgccacggtt gttcaaatgc cgctgagagg tgcgcaaatg cagacatact
    29101 gcgttgtcgc tctcctcttt ccaggcattt aacgccacct gttcgaccag ttttggtagc
    29161 gaaagttggc tcacctgtgc cgcccacggg tcgcgctcaa tggcttctgc cgccagcttc
    29221 gccgccagtt ccggcgtttt ttcatgttcc agcgcttttt tcagcgcctt cggcgtggcg
    29281 accacttctt tttgctgcat caccggagtg gtcgccttcc agcgatacgc ttcttttttg
    29341 gctggagctt tttccagcgc cgatggcacc ggacgcgcct gaacgcgatc tgtgaccgaa
    29401 gccagtcttt ccagcgcagc gttattcacc ggccgcgcgc gggtagcggc tgccggttca
    29461 ttcttttttg ctttggttgc tccctgcacg cgctgcaact gctggcgcgc cgccagcacc
    29521 tggctggtgg tttccgggag tggtacagtc ggtgcctgct gcggcgctga ttgcggttgc
    29581 ggcggcacct gggttggcgt cattactgcc gttggcgcga cgggcgcaaa ggactggcgt
    29641 ggcacttctg gctcaggcag aggcatacgt ggatggaacg ccagcgcgcg cagcagcgtc
    29701 atctcaacgc ccatgcggcg gtccggcgca tacggtaatt ctttgcgacc aatcaacagc
    29761 gtctgatagt aaagctgaat atccgtcggc ggtatggtgc gcgccagttc acgcatccgc
    29821 agctcaatgg cggccatgtc gttgccaagt gcagcaggcg aaagttgtac catcgcaata
    29881 cgatgcaaca ggccgagcat ttccaccagc aacgcttccc actcgatacc acgggcagcg
    29941 gcttcattaa tcagcgccat tacgcgctcg ccgttggcct cgaccatcgc ttcaaccagc
    30001 gacagcgcct gatcgtcgtc aagcgtaccc agcatcgcac tgaccgccgg ggttgaaacc
    30061 tggccgtcac cgctggcaat cgcctggtcg gtcagactta aggcatctcg caggctgcct
    30121 tcagcggcgc gtgccagcaa ttgcagcgcc cgcggctcgt gagcgatatg ttcttcgttg
    30181 aggatgtgct caagctgatg gcgaatttgc tcgacatcca gcgccttgag atgaaattgc
    30241 agacagcgtg acaaaatcgt caccggcaat ttctgtggat cggtcgtcgc cagcagaaac
    30301 ttaacgtgct ccggcggctc ttcaagggtt tttaacagtg cgttaaagct gtggcgcgac
    30361 agcatatgca cttcgtcgat cagataaact ttgaaacgac cacgcgccgg agcgtactgg
    30421 acgttatcca gcaggtcacg ggtatcttca actttggtgc gcgaggcggc gtcgatttca
    30481 atcagatcga caaagcgccc ctgctcgatt tcacgacagt tatcgcacac gccgcacggc
    30541 gtcgcggtaa tgccggtttc gcagtttagc cccttcgcca gcagtcgggc gatagaggtt
    30601 tttccgacgc cacgggtgcc ggaaaaaaga taagcatgat gaatacgccc taacgacaag
    30661 ccgttcgcca gtgcggtcag cacatgttcc tggccgacga cgtcagcaaa ggtttgtggg
    30721 cgccattttc gggctaagac ctgataactc attggcaggc tctgaaacgc tggaaggtgg
    30781 attcacgaag gggtaatgct aacacagccc cgtcagaacg gcgaggctga atgcacatct
    30841 tgtgctgtcc gtagcgtggg cagcacaaga ctggcgataa ttaatggccc gggaacggga
    30901 caaggctata gcaggtaatg ccctgttttt cgagacgctg ttcgccgccg agatcgaaca
    30961 ggttgataat gaacgcagcg tcagccactt caccacccag acgacggatc agtttaacgg
    31021 tcgcttcgat agtgccgccg gttgccagca gatcgtccac caccagaact ttgtcgcccg
    31081 gtttgatggc atcaacgtgg atctccagct gatcggtgcc gtattccaga tcgtaagttt
    31141 cactgatagt ttcacgcggc agtttgcccg gtttacggac cggtacaaag ccaacgccca
    31201 gacccagagc taccggagcg ccaaacaaga agccacgcgc ttcggtgccg acaactttgg
    31261 taatgcccgc atttttgtaa cgctcaacca gcaagtcgat gctgagagcg taagctttcg
    31321 ggtcttccag taagctggtg acatcgcgga aaagaatgcc gggttttggg tagtcctgaa
    31381 tgcttttgat gctatttttg agatactcaa gctgctgtgc agtcgcggtc ataagtgtat
    31441 gcctgcttgt tacggtggta ctcacggcgc gttttaaacg tatcaaaagt aacagttgtt
    31501 taacctttga ccgcctgcgc ctgtgctcga aaacgccaga atgtactggc tgtacgcaat
    31561 aattgcaact gcgattgttg tgcttcagtg cttttcttgc ttttcatcaa tcaccggaat
    31621 tcgccacata tagaaaagca aacaggcgag aattaccagc aacatgatgc gcacccatgg
    31681 catctggacg aaccacagag aaatggcaaa cgtgagcaaa ataagcaaaa tcgcccgcgg
    31741 tttgacgccg cgcggcatcg catgatgttt ctgccagaaa cgtagatagc tgccaaacca
    31801 tgagcggtac agcaaccagg cgtgaaagcg cggggaagaa cgggcaaagc accaggccgc
    31861 cagcaggata aacggcgtcg tcggtaatac cggtaatacc acgcccagcg tacccagcac
    31921 taccgccagc cagccaatga tgattaaaat gattcgttgc atattgagtg ttgtcagctt
    31981 acagagtggc tactttagca taacaattat cattttcatt gaggtcttat cgtgaaaacc
    32041 gccctgctgc tggaaaaact ggaaggtcag ctcgccacgc tgcgtcagcg ttgtgccccg
    32101 gtagcgcaat ttgccacgct aagtgcccgt tttgacaggc acctttttca aacccgtgcg
    32161 acaacactgc aggcttgtct cgatgaggcg ggcgataatc tggctgcgct ttgtcatgcg
    32221 gttgagcagc aacaactgcc gcaagtggcc tggctggcgg aacatctggc tgcacaactg
    32281 gaagccatcg cgcgtgaagc cgccgcctgg tcattgcgcg agtgggacag tgcgccaccg
    32341 aaaattgccc gctggcagcg taaacgtatt cagcatcagg attttgagcg gcggctacgt
    32401 gggatggttg ccgaacgcag agcccgcctg gcgcgggtga ccgatctcgt ggaacagcaa
    32461 acgctgcatc gtgaagtgga agcctatgaa gcgcgcctgg cacgctgccg ccatgcgctg
    32521 gaaaaaatcg aaaacaggct agcgcgctta acccgctagc aatggagaga gtatgtcact
    32581 ggaaaatgcc cctgacgatg tcaaactggc tgtcgatttg attgtgctgc tggaagaaaa
    32641 tcagatccca gcccgcaccg tgctgcgcgc gctggatatt gtaaaacgcg attatgaaaa
    32701 gaaattaacg cgcgatgatg aggcggaaaa gtgagaaata aatggggccg ctaaatgtcc
    32761 cctaagattg tgggcaaaca caaaactgcc tgatgcgcta cgcttatcag gcctacaccg
    32821 ctcctgcaat acattgaatt cttgcggttt cgtaggccgg ataaggcggt cacgccgcat
    32881 ccggcatgaa caacgcgcac tttgtcagta atctcggggc aactaaatgt cgcccccttt
    32941 ggttattacc ctaccgctgg cgtcgggtca tcgcctttgt agtcgcgttt tacttccgtc
    33001 acctcatcgc ccttctcgtt gtgcagatgc acttcaagct ggttaaaggc aatgttgatg
    33061 tcgttttcac ggcacagctg atcgatagta cggttcagct catcgacagt acgactacgg
    33121 tcacgcagtt cacgcacata cagacgcagc tcatgatcca acgtgctggc accaaacgcc
    33181 gtaaagaaga cttccggcat tggttcgtgc atcacccttg ggtgctcagt cgccgccttc
    33241 agtaacactt tacgcacttt ttccagatcg gagccatagg ccacgccgag acggatcacc
    33301 agacgcgtag tagtgtcagt caacgaccag ttgatcagac gctcggtaac aaacgctttg
    33361 ttcgggatga tcacttcttt gcgatcgaaa tcggtaatcg ttgtcgcacg aatacggatc
    33421 ttacttaccg tccccgagaa gctaccaatg gttaccgtat cgccaatacg caccggacgt
    33481 tcgaacagaa tgatcaaacc ggagacgaag ttaccgaaaa tttcttgtaa accaaaacca
    33541 agacctacgg ataatgctgc ggccagccac tggagtttat cccaagagac gcccagcgat
    33601 ccgaacaccg tcatcgcacc aacggcaata atgatgtagt taaggatggt agtaatggca
    33661 tacgacgcgc cctggcgcat attcagtcgc gagagcagca gcacttccag taaaccaggc
    33721 aggttgcgaa tcaacgccca ggccaccatt gaggcgataa tcgcaaacaa cagactgccc
    33781 atg
//
LOCUS       DAJVTL010000033        33556 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.033, whole genome shotgun sequence.
ACCESSION   DAJVTL010000033 DAJVTL010000000
VERSION     DAJVTL010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33556
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.033"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            69..311
                     /locus_tag="OQQ26_001505"
                     /pseudo
     CDS             69..311
                     /locus_tag="OQQ26_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311149.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            complement(353..1429)
                     /gene="glpQ"
                     /locus_tag="OQQ26_001506"
     CDS             complement(353..1429)
                     /gene="glpQ"
                     /locus_tag="OQQ26_001506"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HCS1857000.1"
                     /translation="MKLMLKNLSMAIMMSGMIMGSSAMATDSNEKIVIAHRGASGYLP
                     EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
                     YAIDFTLDDIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
                     STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
                     KNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
                     IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDAL
                     YNKAGVNGLFTDFPDKAVKFLNKE"
     gene            complement(1434..2792)
                     /gene="glpT"
                     /locus_tag="OQQ26_001507"
     CDS             complement(1434..2792)
                     /gene="glpT"
                     /locus_tag="OQQ26_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HCS1857001.1"
                     /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMHDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
                     ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHQELLQKRN
                     GG"
     gene            3065..4693
                     /gene="glpA"
                     /locus_tag="OQQ26_001508"
     CDS             3065..4693
                     /gene="glpA"
                     /locus_tag="OQQ26_001508"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HCS1857002.1"
                     /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
                     FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
                     YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
                     EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LLDHAERDGLDGFITITGGKLMTYRLMAEWATNAVCRKLGNTRPCTTADLALPGSQEP
                     AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
                     LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
                     VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
     gene            4683..5942
                     /gene="glpB"
                     /locus_tag="OQQ26_001509"
     CDS             4683..5942
                     /gene="glpB"
                     /locus_tag="OQQ26_001509"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HCS1857003.1"
                     /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
                     LDLLSHLPDGQAVTDIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQL
                     QGNVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR
                     EFGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI
                     LMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
                     DEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLD
                     VLQTATRGEWYKGDFFAPQPWQQFGVTTDKTLRPSQAGQTIENLFAIGSVLGGFDPIA
                     QGCGGGVCAVSALHAAQQIAQRAGGQQ"
     gene            5939..7129
                     /gene="glpC"
                     /locus_tag="OQQ26_001510"
     CDS             5939..7129
                     /gene="glpC"
                     /locus_tag="OQQ26_001510"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HCS1857004.1"
                     /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
                     SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLLANGFTAKARKQ
                     AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR
                     KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTQELLRKIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA
                     QALA"
     gene            7322..8272
                     /locus_tag="OQQ26_001511"
     CDS             7322..8272
                     /locus_tag="OQQ26_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HCS1857005.1"
                     /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT
                     LRLEPTSFIEKSLHAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA
                     MQRHLDKGYDRVPLVVPLLFYHGETSPYPNSLNWLDEFDDPQLARQLYTEAFPLVDIT
                     IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
                     CGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKIEGWQEGKLEGLQ
                     EGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH"
     gene            complement(8313..9116)
                     /gene="yfaU"
                     /locus_tag="OQQ26_001512"
     CDS             complement(8313..9116)
                     /gene="yfaU"
                     /locus_tag="OQQ26_001512"
                     /EC_number="4.1.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HCS1857006.1"
                     /translation="MNALLTNPFKERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLL
                     IDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTA
                     DQARQVASATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDN
                     LDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV
                     APDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY"
     gene            complement(9134..10423)
                     /locus_tag="OQQ26_001513"
     CDS             complement(9134..10423)
                     /locus_tag="OQQ26_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857007.1"
                     /translation="MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQI
                     DTGLSNEAYALGAGIFFVVYAFLGGPANLLMRKLGARTWIGTTTLLWGFLSAAMAWAD
                     TEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGASLALTLGSPLS
                     GALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQ
                     LASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFT
                     ASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVA
                     LCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFA
                     SDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH"
     gene            complement(10480..11685)
                     /gene="rhmD"
                     /locus_tag="OQQ26_001514"
     CDS             complement(10480..11685)
                     /gene="rhmD"
                     /locus_tag="OQQ26_001514"
                     /EC_number="4.2.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnonate dehydratase"
                     /protein_id="HCS1857008.1"
                     /translation="MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATP
                     MSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEG
                     KCVSDIKLIHDQMLNATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAV
                     RDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFW
                     LMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYEGYRELKRNAPVGMMVTNGE
                     HHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHA
                     VITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPSFGVELNRD
                     CNLKRPYSH"
     gene            complement(11700..12480)
                     /locus_tag="OQQ26_001515"
                     /pseudo
     CDS             complement(11700..12480)
                     /locus_tag="OQQ26_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
     gene            complement(12700..13902)
                     /locus_tag="OQQ26_001516"
     CDS             complement(12700..13902)
                     /locus_tag="OQQ26_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
                     /protein_id="HCS1857009.1"
                     /translation="MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVG
                     DNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMER
                     YFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVM
                     VEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPLI
                     ELKLTGPASEQQAMEKLWLDVKRVAGQSVIFEGTEGLPAQMSRELQNRQFSLTLSEQF
                     TGGLLALQLSRAGAPLLACEVVPSQEETLAQTAHWITERRANHFAGLALAVSGFENEH
                     LNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGHDIASEHGWIEV
                     VESMTLSV"
     gene            complement(14002..14544)
                     /locus_tag="OQQ26_001517"
     CDS             complement(14002..14544)
                     /locus_tag="OQQ26_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857010.1"
                     /translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTEST
                     GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG
                     LQWKIGNSFRLFGEYYYSPDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLSGK
                     DGNRDNAVADGPYVGVNASF"
     gene            14823..15248
                     /gene="nudI"
                     /locus_tag="OQQ26_001518"
     CDS             14823..15248
                     /gene="nudI"
                     /locus_tag="OQQ26_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase NudI"
                     /protein_id="HCS1857011.1"
                     /translation="MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVEPGE
                     RIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSAN
                     REVKINEEFQDYAWVKPEDLVHYDLNVATRKTLRLKGLL"
     gene            complement(15287..15889)
                     /locus_tag="OQQ26_001519"
     CDS             complement(15287..15889)
                     /locus_tag="OQQ26_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HCS1857012.1"
                     /translation="MLAFCRSSLKSKKYFIILLALAAIAGLGTHAAWSSNGLPRIDNK
                     TLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFD
                     LYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNH
                     CLTYIAKNKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH"
     gene            16196..17335
                     /gene="arnB"
                     /locus_tag="OQQ26_001520"
     CDS             16196..17335
                     /gene="arnB"
                     /locus_tag="OQQ26_001520"
                     /EC_number="2.6.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024188371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4-deoxy-L-arabinose
                     aminotransferase"
                     /protein_id="HCS1857013.1"
                     /translation="MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQ
                     LTGNQHAIAVSSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDV
                     DRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVG
                     TYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDR
                     QTWGRAPQAEVLTPGYKYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPF
                     QPLSLPAWPHVHAWHLFIIRVDEQRCGIGRDALMEALKERGIGTGLHFRAAHTQKYYR
                     ERFPTLSLPNTEWNSERICSLPLFPDMTTADADRVITALQQLAGQ"
     gene            17339..18307
                     /gene="arnC"
                     /locus_tag="OQQ26_001521"
     CDS             17339..18307
                     /gene="arnC"
                     /locus_tag="OQQ26_001521"
                     /EC_number="2.4.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate
                     4-deoxy-4-formamido-L-arabinose transferase"
                     /protein_id="HCS1857014.1"
                     /translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL
                     LIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDAD
                     LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSRFRKTASKMINRLIQRTTGKAMGDYG
                     CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLI
                     NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV
                     LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE"
     gene            18307..20289
                     /gene="arnA"
                     /locus_tag="OQQ26_001522"
     CDS             18307..20289
                     /gene="arnA"
                     /locus_tag="OQQ26_001522"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HCS1857015.1"
                     /translation="MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGS
                     VAHLAAERGIPVYAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFN
                     LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAIT
                     LHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLH
                     NMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISVAPLLIACGDGALEI
                     VTGQAGDGITMQGSQLAQMLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTEC
                     LLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI
                     ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSN
                     LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPQLDNLNAARIGS
                     SRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG
                     NPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR
                     NARRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS"
     gene            20286..21176
                     /locus_tag="OQQ26_001523"
     CDS             20286..21176
                     /locus_tag="OQQ26_001523"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HCS1857016.1"
                     /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
                     MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAARHHE
                     VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQLVIE
                     AKEAFHLHYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLL
                     NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
                     RGNIAGREGWLGCQQIAGSR"
     gene            21176..22828
                     /gene="arnT"
                     /locus_tag="OQQ26_001524"
     CDS             21176..22828
                     /gene="arnT"
                     /locus_tag="OQQ26_001524"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HCS1857017.1"
                     /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
                     SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
                     LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG
                     KSAGFLLLGITCGMGVMTKGFLALAVPILSVLPWVATQKRWKDLFIYGWLAVISCVLT
                     VLPWGLAIAQQEPDFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
                     GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLA
                     AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW
                     AFFGWYTLTNVEKTWSFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
                     YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
                     QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK"
     gene            22825..23160
                     /gene="arnE"
                     /locus_tag="OQQ26_001525"
     CDS             22825..23160
                     /gene="arnE"
                     /locus_tag="OQQ26_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HCS1857018.1"
                     /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL
                     ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG
                     GIVILGSTV"
     gene            23160..23546
                     /gene="arnF"
                     /locus_tag="OQQ26_001526"
     CDS             23160..23546
                     /gene="arnF"
                     /locus_tag="OQQ26_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnF"
                     /protein_id="HCS1857019.1"
                     /translation="MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG
                     LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS
                     LKALLGVACIMSGLMLIFLPTTKQRY"
     gene            complement(23540..23806)
                     /gene="pmrD"
                     /locus_tag="OQQ26_001527"
     CDS             complement(23540..23806)
                     /gene="pmrD"
                     /locus_tag="OQQ26_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416762.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein PmrD"
                     /protein_id="HCS1857020.1"
                     /translation="MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGD
                     LLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCTAAGKTQ"
     gene            complement(23916..25271)
                     /gene="menE"
                     /locus_tag="OQQ26_001528"
     CDS             complement(23916..25271)
                     /gene="menE"
                     /locus_tag="OQQ26_001528"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HCS1857021.1"
                     /translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELASGF
                     AVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQF
                     ALVPDGENTFPALTSLHIQLVEGVHAAAWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
                     ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
                     THASLVPTQLWRLLVNRSSVSLKAVLLGGAVIPVELTEQAREQGIRCFCGYGLTEFAS
                     TVCAKEADGLADVGSQLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
                     RDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH
                     RPVAVVEYDQQTVDLGEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
                     Q"
     gene            complement(25268..26230)
                     /gene="menC"
                     /locus_tag="OQQ26_001529"
     CDS             complement(25268..26230)
                     /gene="menC"
                     /locus_tag="OQQ26_001529"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HCS1857022.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
                     ISPLPGFSQETWEEAQSVLLAWVNNWLAGDGELPQMPSVAFGVSCALAELADTLPQAA
                     NYRTAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKGQQFVKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLAR
                     IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL"
     gene            complement(26230..27087)
                     /gene="menB"
                     /locus_tag="OQQ26_001530"
     CDS             complement(26230..27087)
                     /gene="menB"
                     /locus_tag="OQQ26_001530"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HCS1857023.1"
                     /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(27102..27860)
                     /gene="menH"
                     /locus_tag="OQQ26_001531"
     CDS             complement(27102..27860)
                     /gene="menH"
                     /locus_tag="OQQ26_001531"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HCS1857024.1"
                     /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
                     VDLPGHGGSAAISIDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAG
                     LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQRFRTEPLTAVFADWYQQPVFASLNDDQ
                     RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
                     ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
     gene            complement(27857..29527)
                     /gene="menD"
                     /locus_tag="OQQ26_001532"
     CDS             complement(27857..29527)
                     /gene="menD"
                     /locus_tag="OQQ26_001532"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HCS1857025.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
                     SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
                     AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
                     QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
                     ELHPAEKRQPWCVEIPRLAEQAIQAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSL
                     VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
                     ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
                     HRPQNWQELETALADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL"
     gene            complement(29616..30911)
                     /gene="menF"
                     /locus_tag="OQQ26_001533"
     CDS             complement(29616..30911)
                     /gene="menF"
                     /locus_tag="OQQ26_001533"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311180.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HCS1857026.1"
                     /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL
                     ASQQTYPQFYWQQRNGNEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDS
                     SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIKAKEFIVTLVSIKPLPGLHLTT
                     TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARAIDLHFASPVNAAAMMAASRRLN
                     LNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANHPDDKQAQQLGEWLM
                     ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI
                     CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS
                     GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME"
     gene            complement(30990..31295)
                     /gene="elaB"
                     /locus_tag="OQQ26_001534"
     CDS             complement(30990..31295)
                     /gene="elaB"
                     /locus_tag="OQQ26_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HCS1857027.1"
                     /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE
                     KALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            complement(31350..31811)
                     /locus_tag="OQQ26_001535"
     CDS             complement(31350..31811)
                     /locus_tag="OQQ26_001535"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1857028.1"
                     /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
                     TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLDT
                     CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
     gene            31876..32793
                     /gene="rbn"
                     /locus_tag="OQQ26_001536"
     CDS             31876..32793
                     /gene="rbn"
                     /locus_tag="OQQ26_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311183.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HCS1857029.1"
                     /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ
                     HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFVE
                     TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGYRIEEHDKPGALN
                     AQALKAAGVPPGPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDTGPSDA
                     ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD
                     DKGCQHLLRECRSIFPATELANDFTVFNV"
     gene            32983..33556
                     /locus_tag="OQQ26_001537"
                     /pseudo
     CDS             32983..33556
                     /locus_tag="OQQ26_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311184.2"
                     /note="ElaD; specific cysteine protease which targets
                     ubiquitin and ubiquitin-like proteins covalently bound to
                     target proteins; SseL in Salmonella is required for
                     macrophage killing and virulence, and it is secreted by
                     the salmonella pathogenicity island 2 type III secretion
                     system; frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deubiquitinase"
BASE COUNT         8251 a         9018 c         8307 g         7980 t
ORIGIN      
        1 acaccgcttt tgcccttcat ttgcagcgca tagattccac cagccactac cactaatagt
       61 gcgcccagca gataaaatgt gaatttaatc agtcggatac agcgatgaat tttattcgac
      121 agggattagg catcgcctta ttaccagagt taacgctgaa aaccattgca ggtgaattgt
      181 gttccgctcc tcacgaacca accttctatc gacagatttc gttgttggct aaagaaaagc
      241 cggtagaagg cagtccactg tttttactac aaatgtgcat ggaacaatta gtggcgattg
      301 gaaaaatttg atatgagaca ggatggcgca tgaacgccat cctgcagtag cattactctt
      361 tattaaggaa ttttactgcc ttatcaggga aatcagtaaa cagcccattt acacccgctt
      421 tgttatatag agcatcatat aactgattca catcagtagt gtattcaggc agtttatctg
      481 accgcacggt ataaggatgc actaccagtt tattctgctg agcatcttgc accatgccag
      541 tgagtttgat attacccggc tgcgatgtct cctcaatcaa catatggtaa tccggaccaa
      601 taccatcagc atattccgcc acctgtttca tagcccccgg cttaaacatc cagtcgtagt
      661 tgtaattaac ccagcttccg tccggctgtt tctgctgcgt ttcattccag tcggtatagg
      721 caatcagctg taccagattg agatccatgc ccattttagg ttccagctca ttcttaatac
      781 gcttcagctc atcagcatca aaacattgca aataaacttt gtcgtcctta ccggtgtaac
      841 catatttctt cagcacttcc agcgtttttg ccgcaatatc cttcccttcc tgatgatgga
      901 accacggcgc tttaatttct ggataaatac cgatattttt cccggtagag tgatttaacc
      961 cctgaacaaa ttcaatctct tcttcaaagg tgtgcacccg gaagtcggac ttacccattg
     1021 ggaaacgccc cggataagtc tgcacttttt taccgttttc aatatcgaaa ccttcggtaa
     1081 atttcagcga cttaatgtca tccagcgtga aatctatcgc gtagtaacga ccgtctttgc
     1141 gcgcccgatc cgggaaacga tcggcaacat cagtaacacg atcgagataa tggtcatgca
     1201 gaacaaccag atggtcgtct ttggtcatca ccaaatcctg ttccagataa tccgctccct
     1261 gcgcatacgc catcgctttt gctggcagcg tatgctccgg caaatatcca ctggcaccgc
     1321 gatgggcgat gactattttt tcgttgctgt ccgtcgccat tgcactgctt cccatgatca
     1381 ttccactcat catgatcgcc atgctaaggt ttttcagcat caatttcatg ccattagcct
     1441 ccgttgcgtt tttgcagtaa ttcctgatgg cgacgttttt cgccaatcat cacaacaatc
     1501 aacaagataa ccgccagaat gctgccgcca atcattacca taaagccgcc atcccagccg
     1561 aagaagtcca cggtgtagcc aacaatcgcg ctcgccgcca ccgaaccgcc caggtaacca
     1621 aacagaccgg taaagcccgc tgccgtacca gccgcttttt tcggtgccag ttccagcgca
     1681 tgcagaccga tcagcatcac agggccgtag atcaggaaac cgataacaat catacaaatc
     1741 atatcgacgg ttgggttacc tgccgggttc atccagtaaa cgatagtcgc gatggtcacc
     1801 agtgtcataa agaagacgcc ggttgcccca cggttaccac ggaagacttt gtccgacatc
     1861 cagccgcaca gcagggtgcc cggaataccc gcatactcat agaagaagta ggcccaagag
     1921 gatttatcca gcgcgaaatg cttaacctct ttcagataag tcggtgacca gtcgaggatg
     1981 ccgtaacgca gcagataaac gaacacgttg gcgatggcga tgtaccacag cagtttgttc
     2041 ggcagcacgt actgcatgaa gatttgcttc gcggtcagct cctgttccgc tttttcgtta
     2101 tagtcgtccg gataatcatt tttgtactct tcgatcggcg gcaagccaca ggattgcggg
     2161 gtatcgtgca tcatcgcaaa ggcgaataat gccaccagaa tggcgcagaa agcgggcata
     2221 tagagcgccg cgtgccagtc attgaaccag gccatcccca gcaggaacag cagcggcgga
     2281 ataccaccac cgacgttgtg cgcacagttc cacactgaca caatgccgcc acgttctttc
     2341 tgcgaccacc agtgcaccat agtacgacca cacggcggcc accccatccc ctggaaccaa
     2401 ccgcagagga acaacagtac aaacatcacc gcaatgctcg acgtcgccca tggcacaaag
     2461 cccataaaca acatcactgc cgccgccaga atcaaacctg cggggaggaa aacgcgcgga
     2521 ttcgagcgat ccgataccga acccatgatg aatttcgaaa atccataagc aatcgagatc
     2581 cccgaaaggg caaaacctaa atcaccgcgt gagaatccct gctcaaccag ataaggcata
     2641 gcaagcgcaa agttcttacg aaccaaatag taagccgcat agccaaagaa tatccccagg
     2701 aaaatttgcc agcgcaatcg acgataagtc ggatcgatct ccgcggcagg taagcgcgct
     2761 ttgtgtggcg ctggtttaaa aatactcaac attgatagcc tccgtggccc gtggtcttat
     2821 ttatgattaa cagcctgatt cagtgagaga acctgccgtt tcttgagttg ccgcgatgtt
     2881 aagaaaacat tcataaatta aatgtgaatt gccgcacaca ttattaaata agatttacaa
     2941 aatgttcaaa atgacgcatg aaatcacgtt tcactctcga attatgagcg aatatgcgcg
     3001 aaatcaaaca attcatgttt ttactatggc taaatggtaa aaaacgaact tcagagggat
     3061 aacaatgaaa actcgcgact cgcaatcaag tgacgtgatt atcattggcg gcggcgcaac
     3121 gggagccggg attgcccgcg actgtgccct gcgcgggctg cgcgtgattt tggttgagcg
     3181 ccacgacatc gcaaccggtg ccaccgggcg caaccacggc ctgctgcaca gcggtgctcg
     3241 ctatgcggta accgatgcgg aatcggcccg cgagtgcatt agtgaaaacc agatcctgaa
     3301 acgcattgca cgtcactgcg ttgaaccaac caacggcctg tttatcaccc tgccggaaga
     3361 tgacctctcc ttccaggcca cttttattcg cgcctgcgaa gaagcaggga tcagcgcaga
     3421 agctatagac ccgcagcaag cgcgcattat cgaacctgcc gttaacccgg cactgattgg
     3481 cgcggtgaaa gttccggatg gcaccgttga tccatttcgt ctgaccgcag caaacatgct
     3541 ggatgccaaa gaacacggtg ccgttatcct taccgctcat gaagtcacgg ggctgattcg
     3601 tgaaggcgcg acggtgtgcg gtgttcgtgt acgtaaccat ctcaccggcg aaactcaggc
     3661 acttcatgcg cctgtcgtgg ttaatgccgc tgggatctgg gggcaacaca ttgccgaata
     3721 tgccgatctg cgcattcgca tgttcccggc gaaaggatcg ctgctgatca tggatcaccg
     3781 cattaatcag catgtgatca accgctgccg caaaccttcc gacgccgata ttctggtgcc
     3841 tggcgatacc atttcgctga ttggcaccac ctctttacgt attgattaca acgagattga
     3901 cgataatcga gtgacggcag aagaggttga tattctgctg cgtgaagggg aaaaactggc
     3961 ccccgtgatg gcgaaaacgc gcattttgcg ggcctattct ggcgtgcgcc cgctggttgc
     4021 cagcgatgac gacccgagcg gacgtaacgt cagccgtggc atcgtgctgc tcgaccatgc
     4081 tgaacgcgat ggtctggacg gatttatcac catcaccggt ggcaaactga tgacctatcg
     4141 gctgatggct gaatgggcta ccaacgccgt gtgccgcaaa ctgggcaaca cgcgcccctg
     4201 tacgaccgcc gatctggcac ttcctggttc acaggaaccc gctgaagtta ccttgcgtaa
     4261 agtcatctcc ctgcctgccc cgctgcgcgg ttctgcggtt tatcgtcatg gcgatcgcac
     4321 gcctgcctgg ctgagcgaag gccgtctgca ccgtagcctg gtatgtgagt gcgaagcggt
     4381 aactgcgggt gaagtgcagt acgcggtaga aaatttaaac gttaatagcc tgctggattt
     4441 acgccgtcgt acccgtgtgg ggatgggcac ctgccagggc gaactctgcg cctgccgcgc
     4501 tgccggactg ctgcaacggt ttaacgtcac gacgtccgcg caatctatcg agcaactttc
     4561 caccttcctt aacgaacgct ggaaaggcgt gcaacccatc gcctggggag atgcactgcg
     4621 cgaaagcgaa tttacccgct gggtttatca gggactgtgt ggtctggaga aggagcagaa
     4681 agatgcgctt tgatactgtc attatgggcg gcggcctcgc cggattactc tgtggcctgc
     4741 aactgcaaaa acacggcctg cgctgtgcca ttgtcacgcg tggtcaaagc gcgctgcatt
     4801 tctcttccgg ttcgctggat ttgctgagcc atctgccaga tggtcaagct gtgacagaca
     4861 ttcacagtgg actagaatct ttgcgtcagc aggcacctgc ccatccttac tctcttctcg
     4921 ggccacaacg cgtgctcgat ctcgcttgcc aggcgcaggc attaatcgct gaaagcggtg
     4981 cgcaattgca gggcaacgta gaactggctc accagcggat tacgccgctc ggcactctgc
     5041 gctctacctg gctaagttcg ccagaagtcc ccgtctggcc actgcccgcg aagaaaatat
     5101 gtgtagtggg aattagcggc ctgatggatt ttcaggcgca ccttgcggca gcttcgttgc
     5161 gtgaattcgg ccttgccgtt gaaaccgcag aaatagagct gccggaactg gatgtcctgc
     5221 gtaataacgc caccgagttc cgcgcggtga atatcgcccg tttccttgat aatgaagaaa
     5281 actggccgct gttacttgat gcgcttattc ctgtcgccaa tacctgcgaa atgatcctga
     5341 tgcccgcctg cttcggcctg gccgatgaca aactgtggcg ttggttgaat gaaaaactac
     5401 cttgttcact aatgcttttg ccaacgctgc cgccttccgt gctgggcatt cgtctgcaaa
     5461 accagttaca gcgccagttt gtgcgccagg gtggcgtgtg gatgccgggc gatgaagtga
     5521 aaaaagtgac ctgtaaaaat ggcgtagtga atgaaatctg gacccgcaat cacgccgata
     5581 ttccgctacg tccacgtttc gcggttctcg ccagcggcag tttctttagt ggcggattgg
     5641 tagcggaacg taacggcatt cgagagccga ttctcggcct tgatgtgcta caaaccgcca
     5701 cgcggggtga atggtataag ggagattttt ttgcgccgca accgtggcag cagttcggtg
     5761 taaccactga taagacgcta cgcccatcac aggcagggca aaccattgag aacctgtttg
     5821 ccatcggttc ggtgctgggc ggatttgatc ccatcgccca gggatgcggc ggcggtgttt
     5881 gtgccgtcag tgctttacat gccgctcaac agattgccca acgcgcagga ggccaacaat
     5941 gaatgacacc agcttcgaaa actgcattaa gtgcaccgtc tgcaccaccg cttgcccggt
     6001 gagccgggtg aatccgggct atcccgggcc aaaacaagcc gggccggatg gcgagcgtct
     6061 gcgtttgaag gatggcgcac tgtatgacga ggcactgaaa tattgcatca actgcaaacg
     6121 ttgcgaagtc gcctgcccgt ccgatgtgaa gattggcgat atcatccagc gcgcgcgggc
     6181 gaaatatgac accacacgcc cgtcgctgcg taattttgtg ttgagtcata ccgacctgat
     6241 gggtagcgtt tccacgccgt tcgcaccaat tgtcaacacc gctacctcgc tgaaaccggt
     6301 gcggcagctg cttgatgcgg cgttaaaaat cgatcatcgc cgcacgctac cgaaatactc
     6361 cttcggtacg tttcgtcgct ggtatcgcag cgtggcggct cagcaagcac aatataaaga
     6421 ccaggtcgct ttctttcacg gatgcttcgt taactataac catccgcagt taggtaaaga
     6481 tttaattaaa gtgctcaatg cgatgggtac cggcgtacaa ctgctcagca aagaaaaatg
     6541 ctgcggcgta ccgctgctcg ccaacggctt taccgctaaa gcacgcaaac aggcaattac
     6601 gaatgtagag tcgatccgcg aagctgtggg tgtaaaaggc attccggtga ttgccacctc
     6661 ctcgacctgt acatttgccc tgcgcgacga atacccggaa gtgctgaatg tcgacaacaa
     6721 aggcttgcgc gatcatatcg aactggcaac ccgctggctg tggcgcaagc tggacgaagg
     6781 caaaacgtta ccgctgaaac cgctgccgct gaaagtggtt tatcacactc cgtgccatat
     6841 ggaaaaaatg ggctggacgc tctacaccca agagctgttg cgtaaaatcc cggggcttga
     6901 gttaacggtg ctggattccc agtgctgcgg tattgcgggt acttacggtt tcaaaaaaga
     6961 gaactacccc acctcacaag ccatcggcgc accactgttc cgccagatag aagaaagcgg
     7021 cgcggatctg gtggtcaccg actgcgaaac ctgtaaatgg cagattgaga tgtcgacaag
     7081 tcttcgctgc gaacatccga ttacgctgct ggcacaggcg ctggcttaaa ctcccttctg
     7141 atgcccggta agcatgtggt taccgggcat ttttgcgtac acgattccat gcccaatgta
     7201 tgcgttgcaa cgcagtgaaa attcctctga aaacgtctcg caaaggctga aactggcaga
     7261 tgtaaaaggc ccgggataac cgtaatgtcg cgtcatcata aacatcaggt gacggacaac
     7321 catgaccgaa tcaacaacct cctccccgca tgatgcggta tttaaaactt ttatgttcac
     7381 acccgaaacc gcacgggatt ttctcgaaat acatttacca gaaccactgc gcaagctttg
     7441 caacctgcaa accttacgcc tggaacccac tagttttatt gaaaaaagtt tacacgctta
     7501 ctactcggat gttttgtggt ccgtggaaac cagcgacggt gacggctata tctactgcgt
     7561 gattgaacat caaagctctg cagaaaagaa tatggctttt cggctaatgc gctatgccac
     7621 tgccgccatg cagcgtcacc tggataaagg ctatgacaga gttccgctgg tggtgccatt
     7681 gctgttttat catggcgaaa catcgcccta cccgaactca cttaactggc tggatgagtt
     7741 tgacgatccg caacttgccc ggcagttgta caccgaagct tttccgttgg tggatatcac
     7801 catcgtacct gacgatgaga tcatgcaaca tcggcgtata gctctgctgg aactgattca
     7861 aaagcatatt cgcgaccgcg atttaatcgg catggtcgac aggatcacca cgcttttggt
     7921 tagaggcttc actaatgaca gccagctaca aacactgttt aattatctgc tgcaatgcgg
     7981 cgatacctcc cgtttcaccc gctttattca ggagattgcc gaacgttcac cactacaaaa
     8041 ggagagattg atgactattg ctgaacggct gaggcaggaa gggcatcaaa ttggctggca
     8101 ggaaggtaaa attgaaggtt ggcaggaggg gaaattggag ggtttgcagg aaggtatgca
     8161 tgaacaagcc attaaaattg ctttgcgcat gctggaacag ggcattgatc gtgaccaggt
     8221 gctcgcggcc acccagctaa gcgaagccga tctggcagcg aataaccact aattaacaca
     8281 ggcccacagc cgatccccat gggcctttga tatcaataac taccttttat gcgtggccca
     8341 tttttgcctg atttaaacat cgccagtcgt tgatccaggg catcgctgta gagcatcgtg
     8401 tcaacgccaa cagcgacaaa gttcgctccc cacgccaggc attgctgcgc catatcagga
     8461 gccacagcca gaaaaccagc cgctttaccc gcagcacgga tccgccgaat gctggtttca
     8521 ataattcgct gcacttccgg gtgcccggcg ttatccgggt agcccaacga cgcagaaaga
     8581 tccgctggtc caataaacac gccatcaatc ccttcgacgt cgaggatctc gtccaggtta
     8641 tccagtgccg ttttactttc cacctgcact aacaaacaaa gcgaatcgtt gacttgcgcc
     8701 atgtaattct caatgcgtcc ccagcgcgca gcccgtgcca cactggcccc aacaccacgc
     8761 tcaccgtagg gaggatagcg cgtggcagac gccacctgac gagcctgatc ggcagtatcg
     8821 accatcggga tcaatagagt ttgcgcgcca atatccagaa cttgtttaat cagcgattta
     8881 ctgccttcca ccggacggat cacgggttgg ctggcatagg gcgctaccgc ctgtagctgg
     8941 tgataaagat cctgaatggt gtttggcgcg tgctccccgt caatcagcaa ccagtcataa
     9001 ccggaagtag cggcaatttc tgccatataa gaagtagtcg agcttaacca cagaccaatt
     9061 tgcacttcgc ccttgcgtaa acgttcttta aagggattgg ttaataatgc gttcatcgtg
     9121 ttccttaacc tatttaatgg tgtgccacgt cggtctgcgc aacagtacga tttacacgca
     9181 gagtgaaaat aatcagcgaa ccgatgaccg ccaccgctgc cagtgtcagt aatcctgccg
     9241 catcgctggc aaataacgtt tctgctttca cgcgcaggat cggggcaata aacccgccca
     9301 ctgcaccaaa caggtttaca aaaccaatcc ccgcagccag cgccgtaccg gaaagcagtt
     9361 gtgtcggcat cgtccagaac accggctgca cggcaataaa cccgatagct gcaacacaca
     9421 gcgctacgat cgccattact ggagaaagca gcccggacag accaatacca atgcccgccg
     9481 ccagtaatgt cagcgctgcg acattacgcc gttcgccggt tttatcggaa tagcgcggaa
     9541 taagccaggt cccaaacaag gccgcaaccc acggaatggc ggtgaccacc gacgctgtaa
     9601 agcccacttt tgttcccagc aatgccgcaa cctgggtcgg caggaagaaa attaatccgt
     9661 aaaccgccac ctgaatggtc aggtagataa tcgctagttg ccagactcgg ccattacgca
     9721 gcgcatcgct cagccgagaa gtcactttct gttgttcttc acttgccagt tgattgataa
     9781 gcaacgtttt ttcttgttta ctcagaaaac gtgcctgctc cggtgtgtca tcaagccaaa
     9841 agaatgtgaa taccccagca ccgactgcca acaatccttc aatcacaaac atccagaacc
     9901 agccgggatg ccccataaat ccatgcatct ccagcagcgc gccggaaagc ggtgatccca
     9961 gtgttaacgc cagcgatgcg cccatataga acagccccat aatgctggcg cgattacgct
    10021 gcggaaacca ttgcgaggtg agataaatca taccagggaa aaacccagcc tccgcagcac
    10081 caagcagagt gcgaacgatc agaaatttcg cttcagtatc ggcccatgcc atggctgccg
    10141 aaagaaatcc ccacagcagt gttgtcgtac caatccaggt tctggccccc agttttcgca
    10201 tcaaaagatt cgccggcccc cccagaaacg catataccac aaagaaaatg cctgctccca
    10261 gcgcataagc ttcattactc aacccggtat caatctggta ggtctgtttg gcaaaaccga
    10321 tattcgaacg gtcgagaaac gccagcacat acagcgccaa cataaacgga attaaacgca
    10381 cacggttttt cttcaccacg gcgtcaagca aagcggtgct cataaaaagc tccttagaat
    10441 atgtgggcgt taccgttgtc acagcaacgc ctggagtgat tagtggctgt aggggcgttt
    10501 caaattgcag tcacgattga gttcgacgcc aaaactgggt ttatcaagca ctgatttatg
    10561 aatacgacca ttcaccggaa ccggctcatt gagcagaatc gggtcaaact gcggacgcat
    10621 cgttgaacaa tccggactgg tcatcaggaa ttcgctgaat ggcgtattgg tgaaggtgat
    10681 caccgcatgg tgggagtaaa cagacgaacc gtgcggcacc accagttgcc ccctggattt
    10741 ggcgattgcg gcaatttcca ccagcgtggt taagccaccg caccagccaa catccggctg
    10801 cataatgtcg ataccggttt ctgaaagcgt acgaaaagat tgcagtgtgc cgtggtgctc
    10861 accgttggtg accatcattc cgactggcgc gttgcgtttc agttcgcgat aaccttcata
    10921 ctgctgtggc ggcaggcact cttcgatcca tttcaggtta tagggcgcgc aagcgtgggc
    10981 cagtttggtg gcatagttca cgtcctgact catccagcag tcgagcatta accagaaatc
    11041 ctcaccgcat ttttcacgca tatccgcgac catagcggca tctttgcgga tccccgcatc
    11101 gccatcatgt ggcccccagt gcgtcggcat tttgccaccg ataaagccca tctcttttgc
    11161 cagatccgga cgcgcacctg tggcgtagaa ctgaatctca tcacgaacag cgccgcctaa
    11221 aagtttataa accggaagcc cgaccacttt gccgaacaga tcccacagag ccagatcgac
    11281 acaggaaatc gtattcatca ccaggccacc agagccggag taatacaggg tggcattaag
    11341 catttgatca tggatcagtt tgatatcact gacacattta ccctcaatga aacggttaag
    11401 gtgtttttcg acgataaaac agcccatttc accggctgtc gaaacagcga atccggtctg
    11461 gccgttttct gcttcgactt caacaaccaa cgtgccaaga acgttaatgc caaatgactg
    11521 gcgtgactgc tcgtaatcgc ggtatttact catcggggtg gcaatatgat cgtcaatcca
    11581 gtgattcgcc ccctggtcgt gataatcacc gccgccagca cctttttctg ctgtcgcacc
    11641 gccagtaaac caggcgcgaa cctgtttgat ttttggtagg gtcatgatgt tctccattgt
    11701 tatgaggctt gtaagtcaaa gggacttttc catcccaaca gacgtgaaat atccctggcg
    11761 caggcaatgg ccttgcccgc cagataatca cggtattctt cattgatttg taagcgggta
    11821 ccgaccaccg agatcgcagc ggtaagctcg ttattggcgt taaacaccgg cgcagcgaca
    11881 caacggacat cggggtaatc ttcgccgttg tcatagctcc agccctgacg gcgaatacgc
    11941 gccagttctt cgtgaagttg ctgtggatga gtaatcgttg tgggtgtcgc ctgctcccag
    12001 accagccctt cgataatact ttgctgtacc gctgcaggtt gccaggcaag caggcattta
    12061 cctattccgg agcgataaag cgaaaggctt tttccttcat gggaacgcac gctgatagtg
    12121 gctgatgact ccacttttaa aatgtaataa gcgctgccat tatcaataat ccccaggtga
    12181 cataacagcc cggtggtatc catcagttgc gtcaaacgcg gtcgagccag ttcccggaga
    12241 tccatcttgc ttaacgcatg accggaaagc tccaccagct tggtccacaa acaaaaattt
    12301 tcctggtgat caaggctaag aaaacgctga cgcctgaatt cattaagcag caaataggcc
    12361 gtgcttttag ggatccccaa tgtcaatgat cgtcgcagca ctacaggggc caatgcgggc
    12421 aatcaaattg agaatatcaa tagcccgtgt cagggcggga actttgcttg attccaacat
    12481 actggactcc agtcttagat actggaatca gtctcgttgc tcagggggag taaaattgtg
    12541 aagcgcatca aatcccgctc ctcgtccagc ggactggaga aattacgcac aaatttgtga
    12601 atcagcgcac ggattttttc ttattgagta caacaggttg gacaaatttt gccggagggg
    12661 gaatgtgccg gtgcagtaaa ccggcacaga gtggcggaat cagacagata aggtcatgga
    12721 ctcaacaacc tcaatccagc catgctcact ggcgatgtca tggccgttta accaacggcg
    12781 cagcatattc agtgccatca ttgcgcacac ttcctgacgg atagccaagc tgtagcgcgt
    12841 agtgctgaaa cgcacacgca gagcgaaagt gccgtctggt gtggctagcg caaagttgag
    12901 atgttcgttc tcgaaacccg aaacagccag tgccagcccg gcaaaatggt tggcccgccg
    12961 ttctgtaatc cagtgcgcag tttgcgccag ggtttcttcc tgtgaaggaa ccacttcaca
    13021 cgccagcaat ggagcacctg cgcgagaaag ttgcaaagcc aataaaccgc cggtgaattg
    13081 ctcgctcaac gtcaggctga actggcggtt ttgcaattcg cgactcatct gcgcgggcag
    13141 tccttcggtg ccttcgaaaa tcacgctctg tccggcaaca cgtttaacgt ccagccacag
    13201 tttttccatc gcctgttgct cgcttgccgg tccggtgagt ttcagttcga tgagcggcat
    13261 tgaggagcga tagcccattg ttacgcccgg cggcagttgt agagtatcca ggctttgtgc
    13321 cagatcgctt tccgaacgac caaaggtagt taaacgcaga caaaccggcg gctgtggtaa
    13381 agaaaaacgc tcgcgcaggc gcggcaggat ttcgtgttcg accatcacct taaattctga
    13441 cggtacgccg ggggtaaaga acatcaggca acgattaagc tgcacggcaa aaccacaggc
    13501 ggtgcctacc gggttattga taaattcagc actggcaggt agctccgctt gtttacggtt
    13561 gctcggtgcc attactcgtc cacgttcgtg gaaatagcgt tccatctctt tgagccaggc
    13621 ttcatgcagc accaggcctt caccttttgc tgttgcagcg gcgagtgcgc ttaaatcatc
    13681 actggtcggt cccagcccgc cgttaacgat cagcacatcg gcgtgctgac tacgttcgcg
    13741 aagaatggtg actaagtcat caaggttatc ccccaccgta ttgcggcgag ataatggcaa
    13801 cccctgatga aagaaaaaat cggccagcca ggcagcgtta gtgtcaacga tttgcccgtg
    13861 taacacttca tccccggtgg ataacatttc cacttttaac atggttatct cctgcttttg
    13921 ttatcgaatc actataacgc aaagggagat aaggcgtagt aagaaactga atggcgcgac
    13981 agaatgccgc gccggaaggg atcagaaact ggcgttaacc ccaacatacg ggccgtcagc
    14041 cacggcgttg tcgcggttac cgtctttacc cgacagattc aggtagcgat aacccgcctc
    14101 aatactgact ggacgcataa tggtgtaacg cgcgccagca ttcgcttcct cataactttt
    14161 aataccgctg gagagtgaat ccggagagta gtaatactcg ccaaacaaac ggaagctgtt
    14221 gccaattttc cactgcaaac cacctcctac cgctgcggca taaccttcat cgccataatt
    14281 cgggttggtg taaacgcctt ttccgccaac ggtcgccatt aacggcccga gaggcagatt
    14341 caaccccagc cccacgcccg cgacgtcacc gtcgtcgtcg ttatgtgtcc agttaccgct
    14401 taacgccagg cccgtcgatt cagtcccaaa accgacacca atattggtgt attctttacc
    14461 cgcctggccg ctgatgctca ttgcattgac cgatgcagaa accaacagca ttccggccag
    14521 acctgctagc gcaatttttt tcattatccc ctttcccaca agcaattaat caaaattccc
    14581 aaagctgcgg gattgtactg cctggcacag aggattcaat gagcgaaaaa tgggatctag
    14641 tcacttattg taactaaata cttcttaaat aattaaacgc cgaaaaaata aacacacttt
    14701 atcgatacac acaaaaataa taataagtac agttatcatc gcaaaagaga ttactgtcac
    14761 tttcacatat ttctgagtta ccgtattctc atggtttctt tttatttata aggaataccc
    14821 ctgtgcgaca acggactatt gtatgccctt tgattcaaaa tgatggtgct tatttgctgt
    14881 gcaaaatggc cgacgatcgc ggcgttttcc ccggtcaatg ggcgctttcg ggtggcggcg
    14941 tggagcctgg cgaacgaatt gaagaggcac tacgccgcga aattcgcgaa gaactgggag
    15001 aacagctgct tttgacagaa atcacacctt ggaccttcag cgatgatatt cgcaccaaga
    15061 cgtatgcaga tggtcgcaag gaagagattt atatgattta cctgattttt gactgcgttt
    15121 ctgccaaccg agaagtgaaa ataaacgaag agtttcagga ctatgcgtgg gtaaaacctg
    15181 aagatctggt gcattatgat ttgaatgtcg ccacccgaaa aacgttacgt ttgaaaggtc
    15241 ttctgtaaca atgatgacag ccattactgg ctgtcagttt gaaaatttag tggttaacga
    15301 attccccatc cagataaact ttgccttttt ccacatgcat gactaaacca tccagataat
    15361 caggtttaaa tgtcgcatca cgcttatttt tagcaatata tgtcaggcaa tgattatggg
    15421 tgaaaataac gatattttta tcaggcgctt tgctttgtaa gtccttaatt gcactataaa
    15481 tctcattacc gcactgaaga agtcgtttat ctaccgtcag ctttttaccc gcggaaaacc
    15541 aagtcgccga ctgaatggtc cggacggtat tactggaata aagatcgaaa tcagggatgt
    15601 cagcgctaaa agcgttgccc agttcacggg catcctgggt acctttaacc gtaatacctg
    15661 ttttatctga caagcattga ttggttgaac gatcgcaacg ttcagcatgg cgaaacaaaa
    15721 cgacaaccgg gtgctgctgt gccagtctgg ccaatgtttt attgtcgata cgtggcaaac
    15781 cattgctact ccaggcggca tgagtaccca gtccggcaat tgcagcgagc gccagtaaaa
    15841 tgatgaaata tttttttgac ttcaatgatg agcggcaaaa agctaacacg taaactccac
    15901 ctatagacaa gcgcaaccag acaattaccg tgaaattgag cgacatttct ggcgataatt
    15961 agcagttggt gtaatattaa aaatcctacg atgtcggcaa aatgcctcaa aattttgcca
    16021 aatgcaaagc ctaaataaga aaaaatataa aatttcaata tttacgtcta atattagttt
    16081 cttaaggtta agttaatatt ctatccttaa aatttcgctc caaatggcaa aatatacaca
    16141 acactcttta tagcaaatat aagtggacag gtattcaatg gcggaaggaa aagcaatgtc
    16201 agaatttttg cctttttcgc gaccagcaat gggcgtggag gaactcgctg cagttaaaga
    16261 ggttctcgaa tccggttgga tcacaacagg tccgaagaat caggcgcttg agcaagcctt
    16321 ttgccagttg acgggaaatc agcatgccat cgcggtcagt tcagccaccg ccggaatgca
    16381 tatcacgcta atggcgttgg aaattggtaa gggcgatgaa gtgattacgc cttccctgac
    16441 ctgggtttca accctcaata tgatttcctt gctgggtgca acgccggtaa tggtggatgt
    16501 cgaccgcgat acgctgatgg tcacgcctga agcgatcgaa tcagccatta cgccacgcac
    16561 taaagccatc attccggtgc attatgccgg tgcgccagca gatattgacg ccattcgcgc
    16621 cattggcgaa cgttacggca tcgcagttat cgaagatgcc gcccatgccg tcggtacgta
    16681 ttacaaaggg cgacatattg gcgcaaaagg taccgctatt ttttcatttc atgccattaa
    16741 aaatattacc tgtgctgaag gtggcctgat tgtaactgat aatgaaaacc ttgcccgcca
    16801 gctacggatg ctgaaatttc acggtctggg tgtcgatgcc tatgacagac aaacctgggg
    16861 ccgtgcaccg caggctgaag tcttaacacc gggctataag tacaatctga ccgatattaa
    16921 cgccgcgatt gccctgacac agttagcaaa attagagcac ctcaacaccc gtcggcgcga
    16981 aattgcccag caatatcagc aagcactggc agctctcccc tttcagccat taagccttcc
    17041 cgcctggccg cacgttcacg cctggcatct gtttattatt cgtgtcgatg aacaacgttg
    17101 tggtatcggt cgcgatgcgt tgatggaagc gttaaaagaa agaggcattg gtaccgggtt
    17161 acatttccgc gccgctcaca cacaaaaata ttatcgcgag cgttttccca cgctgtcgtt
    17221 accgaatacc gaatggaata gcgaacgcat ctgttcgttg ccgctgttcc cggatatgac
    17281 taccgccgat gccgaccgcg tcatcacagc ccttcagcaa ctcgcaggac aataagccat
    17341 gtttgaaatc caccctgtta agaaagtctc ggtagttatt cccgtttata acgagcagga
    17401 aagcttaccg gaattaatca ggcgcaccac cacagcctgt gaatcgttgg ggaaagagta
    17461 tgaaatcctg ctgattgatg acggcagtag cgataattcc gcgcatatgc tggtcgaagc
    17521 ctcacaagcg gagaacagcc atattgtgtc tattttgctt aaccgcaatt acgggcaaca
    17581 ttcagcgatt atggcgggat tcagtcacgt tacgggcgac ttaattatta cccttgatgc
    17641 tgatctccag aatccgccag aagaaatccc ccgcctggtg gcaaaagccg atgaaggtta
    17701 cgacgtggta gggactgtac gccagaaccg ccaggacagc aggtttcgta aaaccgcttc
    17761 gaagatgatt aaccggctta ttcagcgcac cactggcaaa gcgatgggtg actacggttg
    17821 tatgctgcgc gcctatcgcc gtcatattgt cgatgcgatg ttgcactgcc atgaacgcag
    17881 cacctttatc ccgattctgg cgaatatctt cgcccgccgt gccattgaaa ttccagtaca
    17941 tcatgccgag cgtgagtttg gtgaatccaa atacagtttt atgcgcctga ttaatttgat
    18001 gtacgacctg gtgacctgcc ttaccacaac gccgctacgt atgctgagtc tgctcggcag
    18061 cattattgcg attggaggtt ttagcattgc ggtgctgctg gtgattttac gcctgacctt
    18121 cggaccacaa tgggcggcag aaggcgtctt tatgctattt gccgtgctgt ttacttttat
    18181 tggcgctcag tttatcggca tgggattact cggtgaatat atcggcagga tctacaccga
    18241 tgtccgcgcc cgcccccgct attttgttca gcaagttatc cgtccatcca gcaaggaaaa
    18301 tgaataatga aaaccgtcgt ttttgcctac cacgatatgg gatgcctcgg tattgaagct
    18361 ctgctggctg ccggttacga aattagcgcc atttttaccc ataccgataa tcccggtgaa
    18421 aaagcctttt atggttcggt ggctcatctg gcggcggaaa gaggcattcc ggtttatgcg
    18481 ccggataacg ttaatcatcc gctgtgggtg gaacgcattg cccaactctc accagaggtg
    18541 attttctctt tttattatcg ccatcttatt tgcgacgaga ttttgcagct cgctcccgca
    18601 ggtgcattta atctgcacgg ttcgctgtta ccaaaatatc gtggtcgcgc gccgctgaac
    18661 tgggtgctgg tgaacggtga aacagaaact ggcgttacat tgcaccgaat ggtaaaacgt
    18721 gccgatgccg gggccattgt ggcgcaactg cgcgttgcca ttgcgccaga cgatatcgct
    18781 attacgctgc atcataaatt gtgccatgcc gcgcgccagc tactggaaca gacattaccc
    18841 gccattaaac acggtaatat tctggaaatc gcccagcgcg aaaacgaagc cacctgtttt
    18901 ggtcgcagaa cgccggatga cagtttcctt gaatggcata aaccggcatc cgtactgcac
    18961 aacatggtac gtgccgttgc cgatccgtgg ccgggtgcct tcagctatgt tggcaatcag
    19021 aaattcaccg tctggtcgtc gcgtgttcat cctcatgcca gcaaagcaca gccggggagc
    19081 gtgatttctg ttgcgccact gctgattgcc tgtggcgatg gcgcgctgga aatcgtcacc
    19141 ggacaggcgg gcgacggcat tactatgcag ggctcgcaat tagcgcagat gctgggcctg
    19201 gtgcaaggtt cacgcttgaa tagccagcct gcctgcaccg cccgacgccg tacccgggta
    19261 ctcatcctcg gggtgaatgg ctttattggc aaccatctga cagaatgcct gctgcgcgaa
    19321 gatcattatg aagtttacgg tctggatatt ggcagcgatg cgataagccg ttttctgaat
    19381 catccgcatt ttcactttgt cgaaggcgat atcagtattc attccgaatg gattgagtat
    19441 cacgtcaaaa aatgtgatgt cgtcttgccg ctggtggcga tagccacgcc gattgaatat
    19501 acccgcaacc cgctgcgcgt atttgaactc gattttgaag agaatctgcg cattatccgc
    19561 tactgcgtta agtaccgtaa gcgaatcatc ttcccgtcaa cttcagaagt ttatgggatg
    19621 tgtagcgata aatacttcga tgaggaccat tctaatttaa tcgtcggccc ggtgaataaa
    19681 ccacgctgga tttattcggt gtcaaaacaa ttacttgatc gggtgatctg ggcctatggc
    19741 gaaaaagagg gtttacagtt caccctcttc cgcccgttta actggatggg accacaactg
    19801 gataacctta atgcagcgcg aattggcagc tcccgcgcta ttacgcaact cattctcaat
    19861 ctggtagaag gttcaccaat taagctaatt gatggcggaa aacaaaaacg ctgctttact
    19921 gatatccggg acggtatcga ggcgttgtac cgcattatcg aaaatgcggg aaatcgctgc
    19981 gacggcgaaa ttatcaacat tggcaatcct gagaacgaag cgagcattga ggaactgggc
    20041 gagatgctgc tggcgagctt cgaaaaacat ccgctgcgcc atcacttccc accgtttgcg
    20101 ggctttcgtg ttgtcgaaag tagcagctac tacggcaaag gatatcagga cgtagagcat
    20161 cgtaaaccga gcatccgcaa tgcccgccgc tgcctggact gggaaccgaa aattgatatg
    20221 caggaaacca tcgacgaaac gctggatttc ttcctgcgca ccgttgatct tacggataaa
    20281 ccatcatgac caaagtcggc ttacgcattg atgtcgatac ctttcgtggc acccgtgaag
    20341 gcgtgccacg tctgctggaa atcttgagta agcataatat tcaggccagc atttttttca
    20401 gcgtcggccc ggacaatatg ggccgccatc tctggcgact ggtgaagcca cagtttttgt
    20461 ggaagatgct gcgctcaaac gcggcatcgc tttatggctg ggatatttta ctggcaggta
    20521 cggcctggcc aggtaaagag attggtcatg ccaatgccga tatcattcgt gaagcggcta
    20581 ggcatcacga agtcggcctg cacgcctggg atcaccatgc ctggcaagcc cgtagcggta
    20641 actgggatcg gcaaacaatg atcgacgata ttgcacgcgg ccttcgcact ctggaagaga
    20701 ttatcggtca accggtaacc tgttctgccg ctgcgggctg gcgtgccgac cagctggtga
    20761 tcgaagcaaa agaagcgttc catttgcact acaacagcga ttgtcgtggg gccatgccgt
    20821 tccgtccact gctcgaatca ggaaaccctg gcactgcgca aattccggtg accttaccca
    20881 cctgggatga agtgattggt cgggatgtga aagcagaaga ttttaacggt tggttactca
    20941 accgcatcct gcgagataaa ggcacgccgg tttataccat tcatgccgaa gttgaaggct
    21001 gcgcttatca gcataatttt gtggatctcc tcaaacgcgc agctcaggaa ggcgtgacat
    21061 tttgcccttt aagcgaactg ttatcagaga cgttgccgct cggacaagtt gttcgcggaa
    21121 atattgccgg acgtgaaggc tggctgggtt gccaacaaat tgcgggtagt cgctgatgaa
    21181 atcggtacgt taccttatcg gcctcttcgc gtttattgcc tgctattacc tgttaccgat
    21241 cagcacgcgt ctgctatggc aacccgatga aacgcgttat gcggaaatca gtcgagaaat
    21301 gctggcatcc ggcgactgga ttgtgcccca tctgttaggg ctacgttatt tcgaaaaacc
    21361 cattgccgga tactggatta acagcattgg gcaatggcta tttggcgcga ataactttgg
    21421 tgtgcgggca ggcgttatct ttgcgaccct gttaactgcc gcgctggtga cctggtttac
    21481 tctgcgctta tggcgcgata aacgtctggc tctactcgcc acagtaattt atctctcatt
    21541 gtttattgtc tatgccatcg gcacttatgc cgtgctcgat ccgtttattg cattctggct
    21601 ggtggcggga atgtgcagct tctggctggc aatgcaggca cagacgtgga aaggcaaaag
    21661 cgcaggattt ttactgctgg gaatcacctg cggcatgggg gtgatgacca aaggttttct
    21721 cgcccttgcc gtgccgatat taagcgtgct gccatgggta gcgacgcaaa aacgctggaa
    21781 agatctcttt atttacggct ggctggcggt tatcagttgc gtactgacgg ttctcccctg
    21841 gggactggcg atagcgcagc aggagcctga cttctggcac tattttttct gggttgagca
    21901 tattcaacgc tttgcactgg atgatgccca acatagagct ccgttctggt actacgtgcc
    21961 ggtcatcatt gccggtagcc tgccgtggct gggattactc cccggtgcac tgtacacagg
    22021 ctggaaaaac cgcaagcatt ccgcaaccgt ctatttgttg agctggacga taatgccgct
    22081 gctgtttttc tccgtcgcta aaggtaaatt gcccacctat attctttcct gctttgcatc
    22141 tctggcaatg ctgatggcgc attacgcttt gctggcagca aaaaataatc ctctggcgct
    22201 gcggattaat ggctggatta acatcgcttt tggcgtcact ggcattattg ccacatttgt
    22261 ggtctccccg tggggaccaa tgaacacgcc ggtgtggcaa accttcgaga gctataaagt
    22321 cttttgtgcc tggtcgattt tttcgctatg ggcatttttc ggctggtaca ccttaacaaa
    22381 cgtcgaaaag acctggtctt ttgccgcgct ttgcccgctg gggctggcgt tgctggtagg
    22441 attttcaatt cctgacagag tcatggaagg aaaacatccg caattttttg tcgagatgac
    22501 acaagaatca cttcagccaa gccgctatat tcttactgat agcgtcggtg ttgccgcagg
    22561 tctggcatgg agcctgcaac gcgatgacat catcatgtat cgccagacag gtgagttgaa
    22621 atacggcctt aattatccgg atgcgaaagg gagatttgtc agcggtgatg agttcgcaaa
    22681 ctggcttaat caacatcgtc aggaggggat tattacactc gtgctttcgg ttgaccgcga
    22741 tgaagatatc aacagtctcg ccattccgcc cgcagatgcc atcgatcgtc aggagcgtct
    22801 ggtgctgatt cagtatcgtc ccaaatgatc tggctaacat tagtctttgc cagcttgctt
    22861 agcgttgccg ggcagttgtg tcagaaacag gcaacctgct ttgtggcgat aaacaaacgg
    22921 cgcaaacata tcgtgctgtg gctgggactg gcgctggctt gtcttggtct tgccatggtg
    22981 ctctggctgc tggtcttaca gaacgtaccg gtaggcattg cctacccgat gttaagtctg
    23041 aattttgtct gggtgacgct ggctgcagta aaactgtggc acgaaccggt atcgccgcgt
    23101 cactggtgtg gggtggcgtt cattattggt ggcattgtga tcctcgggag tacggtgtaa
    23161 tgggcctgat gtggggatta ttcagcgtca ttattgcctc agttgcgcaa ttaagcctgg
    23221 gttttgcggc gagtcatctg ccgccgatga cgcacttatg ggattttatc gcggctctgt
    23281 tagcttttgg gctggatgcc cggatactgt tactcgggct gctgggttat ctgctttccg
    23341 ttttttgttg gtataaaacg ctacataaac ttgcgctaag caaagcctat gccttgctca
    23401 gtatgagtta tgtgctggta tggattgctt caatggtact tcccggctgg gaagggactt
    23461 tttcgctgaa agcactactg ggagtagcct gtattatgag cgggttgatg ctgattttcc
    23521 tgcccacgac aaaacaacgt tactgagttt tccctgccgc tgtacactgc cgttcccact
    23581 catcggggct ataactgctt gccgagagga ctttcaccgt atgcagcttt tcacgattaa
    23641 tacaataaag cgcattctgc aaaggcgaga gtaaatcccc cactttcacg gcgaagtcac
    23701 tcttcacttc ggcgatcatt tttatcgcgc cgccagcatc gcagagcata agtacatgtc
    23761 tgttatcttg tttattgcag cacgattttt tgaccagcca ttccattgca ttatcctgtt
    23821 tgctaagagt tttcacatca atttacagat taacagataa actctttatc aacggcaatg
    23881 gaatggcaga aatgagaagt gaaacggagg gttaattatt gctgacgttg cacccactct
    23941 tttagcgcct gacgtgaaat tttaataccg ccgtttttca gctccggcgg taaagtcagc
    24001 cagcgcaccg gttgttgaaa acgagccagc ttatctttca cccattcgcc aagatcaacg
    24061 gtttgctggt catactccac caccgctacc ggccgatgac caaactcctt gtcggcaacg
    24121 ggaacgataa acacctgcaa aaccgcagga tgtgcagcaa taacacgctc gacttcttcc
    24181 ggctgaatac cctcaccgcc actgaagaac agattgtcta aacgtccgac aatggtcagc
    24241 ttgccattat gcatctcacc gcgatcgcgc gtagcgtacc agccttcgtc attaaccagt
    24301 gaaaccagtt gcccgttacg ccagtaacct tctgccatac tggcagcccg cagccacact
    24361 tcattattaa cgattttcac ttcccgaccc ggcagctgcg aaccaacgtc tgccaggccg
    24421 tcggcttctt tcgcacacac cgtggaggca aactcggtca gaccatagcc gcaaaagcaa
    24481 cgaatcccct gctcgcgcgc ctgttccgtc aactcgaccg ggataaccgc gccgccaagt
    24541 aacaccgctt tcagggaaac ggaactgcgg ttaaccagca aacgccagag ttgtgttggc
    24601 accagtgaag cgtgagtaca gcctgccagc atttgctcca atggctgttt atcacgcacc
    24661 gtcatccgcg caccagcgta taaccagcgc cacataattc cctgaccgga gacgtgaaac
    24721 agcggtaaag agagcaacca gtcatcgtga tcgccaaacg gaatcagcga taacacacct
    24781 tgcgcactgg caagatgggc ctgataagta tggacagcgg ctttcggcaa accggtagaa
    24841 cccgaggtca acgtcattga gcacagacgc gtcggctgcc acgcagcggc atgtacgcct
    24901 tcaaccagct gaatgtgcag cgacgttaat gccggaaacg tgttttcccc atccggcacc
    24961 agcgcaaatt gcagcgtcag gttgggcagc aattcttcaa gcaacggttg cggcagctga
    25021 gggttcacgg gcaacacccg cgccccgcat tgcagtaacg ccagccaggc gagcagcgtt
    25081 tgcggcgtat tccacgcccg caacatcacg ccgctgccct caaccacacc ctgcaccgca
    25141 aatccggagg ctaattcatc gacgcgagca caaagctcgc gccagttgag ttgctcgtca
    25201 ttaagacgta aggcgatggc ttctccccgc acttgccgcc agtgacgcca cggccagtca
    25261 gagaagatca taacaaccgc tccagtgcat caacttccac gacaggcagc gtgctacccg
    25321 gccagcgacg aacctgctgc gcctgcatca gatccagcgt gtccagccct ggaatggtgt
    25381 ctggcgttaa ccaggcggca atccgcgcca gttgcgttaa gcctaagctc gattcaatgg
    25441 aagaactgat caccgccgtc agccccagcg cgtgtgccgc ctgcacctgc tcgcgtactt
    25501 tttccaggct gcccgtgagc gtgggtttga taaccaccgc gcgcacgccc tcttcagcca
    25561 caaaggcaaa atccggctcg cgcaggcttt catcccaggc aatggcaatg ccggtttcac
    25621 gggcaaacgc acgcgaatca tcgcgagttt tgcacggctc ttcgagaaac gcgatgcggt
    25681 ggcgataatc cgggttaacg tatttgacaa actgctgacc tttcagcggt gtccaggcgc
    25741 gatttgcgtc aagacgcaaa tgcagatccg gaattgcctc cagcaacaga ttcaccacca
    25801 tgccgtcgcg caccgcttcg tacaatccca ctttgacctt cgccactttc tcgcctggca
    25861 tatctgcaag tttgaggatc agatcgtccg gatcgccatt acacagtggt gccgtacggt
    25921 aattggccgc ctgcgggagc gtatctgcca gctccgccaa tgcacagctt acgccaaagg
    25981 caacggaagg catctgcggt agctcgccat cgcctgccag ccagttattt acccaggcaa
    26041 gcagcacact ttgcgcctct tcccaggttt cctgactgaa gcccggcagt ggggagatct
    26101 ccccccaccc ttcgcgctcg ccttcacgca ggcaaacata cagcccgtcg cgggttttta
    26161 accgcctgtc gcgcagaacc acccccgcgt ccatggggat ctgccagcgg tatacctgcg
    26221 cgctacgcat tacggattcc gtttaaattt gctgaaatca ggctgacgtt tctggttgaa
    26281 ggcgttgcga ccttcctgac cttcttccgt catgtagaac agcatggtgg cgttgcccgc
    26341 cagctcctgc agacccgcct gaccatcaca gtcggcgttc agtgcagctt tcaggcagcg
    26401 cagcgccatc ggactgtttt gcagcatttc gcggcaccag cgaacagttt ctttttccag
    26461 atccgccagc ggtaccacgg tgttgacaag gcccatatcc agcgcctgtt ttgcgtcgta
    26521 ctgacggcac aggaaccaga tttcacgcgc ttttttctgc ccgacgatac gagccatgta
    26581 ggaagcgccc cagccgccgt cgaaggaacc gactttcggg ccagtctgac cgaagatggc
    26641 attatctgcc gcgatagtca ggtcgcacat catgtgcaga acgtgaccac cgccgatgga
    26701 gtagccagcc accatcgcga caaccggttt cggacaggta cggatctgac gctggaagtc
    26761 cagcacgttc aggtgatgta cgccggaatc atctttatag ccgccgtaat caccacgcac
    26821 tttctggtca ccaccggagc agaacgcttt atcgcctgcg ccagtcagaa tgatcacgcc
    26881 gatattgtcg tcataacgcg catctgccag tgcctggatc atctctttta ccgtcagagg
    26941 acggaaggca ttgcgcacct gcggacgatt aatggtgatt tttgcgatac catcggtgga
    27001 tttttcataa cgaatgtcct cgaaaccttc ggagcagtcg tgccattcaa ccggtgcgta
    27061 aagcattgct tcatcaggat aaatcatatt gtgtccttta gtcagaaacg caagatctgc
    27121 gccagacttg cgattacgcc agcgggattt tcccgatgcg cgttatgtcc ggcgcgagga
    27181 atgacatggc agtcggcagc cagttccgcc gccagggcgc ggaatttgct gtcacgttca
    27241 ccacataaat aataaaacgc aaatgtgcgg gcgctaaggt tagcacgtaa atcaggctgg
    27301 acggcgagag aagtcgcctc cagcatggcg gcaagggttg cgccattatt gttgctgcgc
    27361 agcgccacca gctcccggcg ttgatcgtca ttgagcgagg caaaaacagg ctgttgatac
    27421 cagtcggcaa ataccgccgt taacggttct gtgcgaaaac gctgcgccca ttggcgatcg
    27481 gaacgctgac gttccgcacg ttgttcagca ttttgcagcc ccggatgccc gccttcgaca
    27541 ataaccccac aaagccccgc cagcccctgg caagccgcca tcatcgccac ccgtccgcca
    27601 agcgagtacc ccaccagcca gaagtcaagg atgttgtaac taaccaaggt tttacgcagt
    27661 aagtcggtga catcatcaaa tccatcgatg ctaatcgccg ccgaaccacc gtgaccaggg
    27721 agatcaacat acaaccgtga gtagtcggca aacgcctcgc ccacttcttg ccattcgtgg
    27781 caatcgccgg aaaaaccgtg caaaaacacc agccagggta aacctggttt gccgtgtttt
    27841 gcctgcgcgt gcaggatcat aaatggctta cctgcgccag aagttgctgg agcgtttgcg
    27901 caccatcggt gtcgttaacc accatttcaa ttaccgtggt ggttggcgtg cgccaggcat
    27961 cggcaagtgc cgtttcaagt tcctgccagt tttgcggacg atgatatttc agctcaaaca
    28021 tcgcggcggc gtgctcaaaa tgaacgtttt gcggcatcag atagaaacgt tcgcgctcgc
    28081 tttgcggcgt tggcaacagc gaaaaaattt gcccgccgtt gttattcacc acaattaata
    28141 ccagcggcgc ggaaacctga cgcaataacg ccagcgcgtt gagatcgtaa agtgcggaga
    28201 gatcgcccac aatcgccagc gtcggtttgc cgcttgcccg ctgaacgccg gcggcggtcg
    28261 aaagcagtcc gtcgataccg ctggccccac ggttgctgta caccgggtaa cctgccggaa
    28321 gttgcgaaag cgcatcaatc agacgtacta ccaggctgtt accgacaaac aattgcccct
    28381 gttcaggcaa atagtcgctg atgcgatgcg ccagttgtgc ttcgccaaac gcatcgcgac
    28441 gggcaataac cgcctgaatt gcctgttctg ccaggcgcgg gatttcaacg caccagggct
    28501 ggcgtttttc tgccggatgc agctccagcc agtcggcaat attggcaatt aagcggcgtc
    28561 cacgatggtg tgccggatca agtcgccctt caatgtcatc aacaatccag tactcttctg
    28621 gttcacagct tgcctgccat tgcaggagcc gcttgcccgt caggctgctt cccagttgca
    28681 ccacaatttg cgcctgttgc agttcgctgg tcgctttggc attgcctaac cagagatcgg
    28741 cacacggcag cggctgtccg gtttgcgaca gcacgtcgcc aatcagcggc cagccaagag
    28801 tttgcgccca cagtgcaact tttttgccct cttccgcact catgcgcccg gcaaccacca
    28861 cgccgcgctt ttgccgccag aagaaccagt cgcgctgttt ttcactctca agacgaggcg
    28921 cttcacgcag ccacggctta tcatcctgcc accagtcacc cagacgctgt tgccagctaa
    28981 gcccagtgtc gtccatttcg ccatacagcg gttcggcaaa cgggcagttg atatggactc
    29041 caccagcatg aagcgtaccg agagcatggt cgatggtaga aaccagccaa cgtgcgggga
    29101 tatcctgggt cgggcgcggc aatgaaatac tgtgcgtggg gtgagaggcg aacattcccg
    29161 gctgacgaat cgcctgattc gcgccgcagt caattagctc cggcgggcga tcggcggtta
    29221 acaggatcag tttttctccg gttaacccag cttcaatcag tgcaggatag agatttgcta
    29281 ccgccgtgcc ggaggtcaca atcaccgcca ccggctgctt gctaactttc gccagcccca
    29341 gcgccagatg ccccagtcca cgctcatcga aatgggtgtg gtgaatgaat gcggaattct
    29401 ccgccgccgc taacgttaac ggtgtagaac gcgagccagg ggcgatacag atgtgtctga
    29461 cgccgtgacg cgttaatgct tccagaatga ccgccgccca gcgtcggtta aatgcgctta
    29521 ctgacatgag tttgtccggt atcaatattg cggctaagta taaggagcta caaaaataga
    29581 ttattgatat gaatcggtaa tgatgcgact cattactatt ccatttgtaa taaagtgcgc
    29641 agccctgccg ctttgttgtc gatttcctgc cactcttgct cggggtcgga gccacggaca
    29701 atgcccgcgc cagcatatag ccgcacgaca ttgccgctga tttttgctga gcgcagggaa
    29761 acgcagaatt cgctttgctg taatgagaga tagcccgcag aaccggcgta ccattctcgg
    29821 gtgaacggtt cgtgacgggc gataaactgt cgcgccagat cgcgcggtaa gccagcaact
    29881 gctgccgttg gctgcaactg atgtaaacag atcacatcat ccgctttgtt gagtgaagtc
    29941 cagatacaac ggcgaagatg ctgcacttta cgcagacgca gtacctgcgg cggtaaaaca
    30001 tccagcgtct gggtatcggc ctgcaatcgt tggcagatat cttccaccac cagcatgttc
    30061 tcccgctggt ttttatcatc cgccatcagc cactcaccta actgctgcgc ctgcttatca
    30121 tcaggatgat ttgctactgt tcccgccagc gcttcagtac gcagcgcttt gtcacgccgc
    30181 cgccataacc gttccggtga agagccaaga aaagcatttt cgccatcaaa ggccatgtaa
    30241 aaatggtagc aattcagatt cagtcgacga ctggcagcca tcatcgccgc cgcattgacc
    30301 ggacttgcga aatgcaggtc aattgcccga gcaagcacca ctttgtcgag ctcgccttcg
    30361 gcgatggttt tcgttgccag ttcgattaat tgcgtccagc ccgttttgtc cggccagtgt
    30421 tgttctcgcg tggtggttaa atgtaatcca ggcaagggtt taatactcac cagtgtgacg
    30481 ataaattctt ttgccttaat cgcatcatgc tgaagggagc tttcgctgaa tagcgtcagc
    30541 cgcagcgtgg ctttaccgcc acaacgtcgc cattccagac gtggtagaag taaattgccc
    30601 tgcgacgagt caaacgcatt cagcccccag atgcgtaagt cggcgtgttc cgggtgctgg
    30661 cgaagaaaac gttgtgcctg gtccaacgac gtaaaacggg taatagcgcc caggacggca
    30721 gcttcttcat taccattacg ttgttgccag tagaattgcg ggtacgtttg ctgactggcc
    30781 agccagctca aggcatcaaa agcgtctttg agagggaaag gaatatcgat aacccgaatg
    30841 ccgggtgtcg ccggaatctc ttgcgacaaa tggcgcagta aattttccag cgccgtagta
    30901 agtgattgca cgcggacctc tccctgttaa aagcctcaca ttatacgggg tactacaaaa
    30961 aaaatgcagt accccggtgt agggaggttt taacggcgtg ccagcaacag tcctaatacc
    31021 agcccaacgg ccgcacccac accaattccc tgccagggtt tttcgtggac gtagtcatca
    31081 gcacgataaa cagcctgctt cgcccgatag taataactgt ctgaagcctg gctaacccgt
    31141 tttttcacat catccagcgc tttttctgca cgcgctttca gctcaacata tttctgatcg
    31201 gcgggatcgc cagaggagcg gagcacctct tccagtgttt cactaagcag cgtcaggtcg
    31261 tcatcgatac gtgtatcacc aaactgatta gacattctcg ttctccattt gcgtaaaacc
    31321 tgtcactaac tatagacaag ggttattgat tacgcctgaa ttacctcgcg tgccatccca
    31381 atgtgtggga taccatcttc ttcatagacc tccgtcacag ggataaaacc gaaactctgg
    31441 tagaagtttt gcagatgcgc ctgcgccccg aggtaaacag gcttatcagg ccagtgatgc
    31501 gtgcaggtgt cgagggtttt actcatcagt tgctgcccca ctttttcgcc acgcaacgct
    31561 tcactgacaa tcacccgacc aataacgacc ggctcaagat catcatcact tttcagaatc
    31621 ctcgcatatg ccaccagttc atcatttttc caaccgagaa tatggcgatt atcccccgtc
    31681 aaatcatcac catcgatatc ctgataaggg caattctgct cgacaacaaa caccgcgcaa
    31741 cgcagttgta ataaggcata aagctgggaa accgataatt cagagtgatg cagatcttgc
    31801 cattcaatca taatgctctc cttttagatg tatgccttat actagccgga atattttttg
    31861 aaacgtgatg aactcatgga attaattttt ttaggtactt cggccggtgt gccaacccgt
    31921 acgcgcaatg tcacggcaat attgcttaac ctgcaacatc cgacccagag cggtctttgg
    31981 ttgtttgact gcggtgaagg cacccagcat cagctactgc ataccgcctt taaccctgga
    32041 aaactggaca agatttttat cagtcacctt catggcgatc atctctttgg tttacccggc
    32101 ttgctgtgca gtcgttctat gtctggtatt gtccaaccct taacgattta tggtccgcaa
    32161 ggtatccgtg aatttgtgga gaccgcgctg cggattagcg gctcatggac cgattatccg
    32221 ctggaaattg tcgaaattgg cgctggcgaa attctcgatg atggcctgcg caaagtgacc
    32281 gcttatccaa tggaacaccc actggaatgc tatggctatc gtattgaaga acatgataaa
    32341 ccgggtgcat taaatgccca ggcattaaaa gctgctggcg taccgcctgg cccactgttt
    32401 caggaattaa aagcgggcaa aacaatcatg ctggaagatg gaaggcagat taacggcgca
    32461 gattacttag ctgctccagt gccaggtaaa gcgctcgcta ttttcggcga taccggcccc
    32521 agcgatgccg cacttgacct ggctaaaggt gtcgatgtca tggtgcacga agcgacgctg
    32581 gatataacca tggaagccaa agccaatagt cgcggccata gctctacacg ccaggctgcg
    32641 acactagctc gtgaggctgg agtcggtaag ctaatcatta cccacgtcag ctcgcgctat
    32701 gatgacaaag gttgtcagca cctgttacgt gaatgcaggt caattttccc ggcgactgaa
    32761 ctggcgaatg atttcaccgt gtttaacgtt taactctgct tattattaaa aacaggtcga
    32821 aacttgccct gttatcgcac ccgcgctaca tatatccacc cacacgggca tattgagcga
    32881 tttttgatat ttattcatct ccttacgcac tatattcaga gcaataagtt gcctcttttt
    32941 atcttcattc agcacaacct ttgcaactaa aaggagccta tgatggttac agttgtcagc
    33001 aattattgtt aattatctca aacgcaactc agtcagacat ttgcagaaaa atttactgtg
    33061 accgaggaat tactgcagtc tttaaaaaaa acagcgttat ccggagatga agaaagcatt
    33121 gagttactgc ataatattgc gttaggttat gatgaatttg gaaaaaaagc tgaagatatt
    33181 ctttaccata ttgttagaaa cccaacaaat gagaccctat cgattatcag acttatcaaa
    33241 aatgcttgtt taaaattata taatctggca catatcgcaa ccaactcccc cctcaaatca
    33301 catgattcag atgatctcct gttcaaaaaa ctatcctccc ccttcgaaat taatgacaat
    33361 tatcgacagt gatattcctc ttatatctga aaaacagtcg ctttcaaagg tgcttttaaa
    33421 tgatgagaat aacgaactga gcgatgggac aaacttctgg gataaaaatc gtcaattaac
    33481 cacagatgaa atagcttgct atcttcagaa gatcgccgct aatgcaaaaa atactcaagt
    33541 caattatcct actggt
//
LOCUS       DAJVTL010000034        33556 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.034, whole genome shotgun sequence.
ACCESSION   DAJVTL010000034 DAJVTL010000000
VERSION     DAJVTL010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33556
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.034"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            529..666
                     /locus_tag="OQQ26_001538"
     CDS             529..666
                     /locus_tag="OQQ26_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001102512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857030.1"
                     /translation="MNVQAIFILMVVQLFGKEIAVTIEELQAVLVPHRLLSQLVKFRS
                     A"
     gene            1266..2045
                     /gene="ipaJ"
                     /locus_tag="OQQ26_001539"
     CDS             1266..2045
                     /gene="ipaJ"
                     /locus_tag="OQQ26_001539"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     protease IpaJ"
                     /protein_id="HCS1857031.1"
                     /translation="MSEQRKPCKRGCIHTGVMLYGVLLQGAIPREYMISHQTDVRVNE
                     NRVNEQGCFLARKQMYDNSCGAASLLCAAKELGVDKIPQYKGSMSEMTRKSSLDLDNR
                     CERDLYLITSGNYNPRIHKDNIADAGYSMPDKIVMATRLLGLNAYVVEESNIFSQVIS
                     FIYPDARDLLIGMGCNIVHQRDVLSSNQRVLEAVAVSFIGVPVGLHWVLCRPDGSYMD
                     PAVGENYSCFSTMELGARRSNSNFIGYTKIGISIVITNEAL"
     gene            complement(2991..3920)
                     /gene="virB"
                     /locus_tag="OQQ26_001540"
     CDS             complement(2991..3920)
                     /gene="virB"
                     /locus_tag="OQQ26_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence regulon transcriptional activator
                     VirB"
                     /protein_id="HCS1857032.1"
                     /translation="MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTF
                     VNQKTNVRDQESLTEESLADIIKTIKLQQFFPVIGREIDGRIEILDGTRRRASAIYAG
                     ADLEVLYSKEYISTLDARKLANDIQTAKEHSIRELGIGLNFLKVSGMSYKDIAKKENL
                     SRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILK
                     EEIKDLDTNLPPDIYKKEILNIIKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTN
                     RTLIFTLSKINKTVQREIDEAIRDIISRHLSSS"
     gene            complement(4137..4373)
                     /locus_tag="OQQ26_001541"
     CDS             complement(4137..4373)
                     /locus_tag="OQQ26_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCS1857033.1"
                     /translation="MIKEKILSIVAFCYGIAYSKLSEETKFIEDLSADSLSLIEMLDM
                     ISFEFNLRIDESALEHIITIGDLISVVKNNTKSI"
     gene            complement(4377..6290)
                     /gene="ipaA"
                     /locus_tag="OQQ26_001542"
     CDS             complement(4377..6290)
                     /gene="ipaA"
                     /locus_tag="OQQ26_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector invasin IpaA"
                     /protein_id="HCS1857034.1"
                     /translation="MHNVNNTQAPTFLYKATSPSSTEYSELKSKISDIHSSQTSLKTP
                     ASVSEKENFATSFNQKCLDFLFSSSGKEDVLRSIYSNSMNAYAKSEILEFSNVLYSLV
                     HQNGLNFENEKGLQKIVAQYSELIIKDKLSQDSAFGPWSAKNKKLHQLRQNIEHRLAL
                     LAQQHTSGEALSLGQKLLNTEVSSFIKNNILAELKLSNETVSSLKLDDLVDAQAKLAF
                     DSLRNQRKNTIDSKGFGIGKLSRDLNTVAVFPELLRKVLNDILEDIKDSHPIQDGLPT
                     PPEDMPDGGPTPGANEKTSQPVIHYHINNDNRTYDNRVFDNRVYDNSYHENPENDAQS
                     PTSQTNDLLSRNGNSLLNPQRALVQKVTSVLPHSISDTVQTFANNSALEKVFNHTPDN
                     SDGIGSDLLTTSSQERSANNSLSRGHRPLNIQNSSTTPPLHPEGVTSSNDNSSDTTKS
                     SASLSHRVASQINKFNSNTDSKVLQTDFLSRNGDTYLTRETIFEASKKVTNSLSNLIS
                     LIGTKSGTQERELQEKSKDITKSTTEHRINNKLKVTDAVTDANTINYVTETNADTIDK
                     NHAIYEKAKEVSSALSKVLSKIDDTSAELLTDDISDLKNNNNITAENNNIYKAAKDVT
                     TSLSKVLKNINKD"
     gene            complement(6299..7297)
                     /gene="ipaD"
                     /locus_tag="OQQ26_001543"
     CDS             complement(6299..7297)
                     /gene="ipaD"
                     /locus_tag="OQQ26_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle tip complex
                     protein IpaD"
                     /protein_id="HCS1857035.1"
                     /translation="MNITTLTNSISTSSFSPNNTNGSSTETVNSDIKTTTSSHPVSSL
                     TMLNDTLHNIRTTNQALKKELSQKTLTKTSLEEIALHSSQISMDVNKSAQLLNILSKT
                     EYPINKDARELLHSAPKEAELDGYEMISHRELWAKIANSINDINEQYLKVYEHAVSSY
                     TQMYQEFSAVLSSLAGWISPGGNDGNSVKLQVKSLKDALTTLKKNYEDKPLYPATNTV
                     SEQEANKWLTELGGTIGTVSAKNGGYVVSINMTPINNMLNSLDKLGTTDEVVLDNAKY
                     QAWNAGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSCTDTDKLFLHF"
     gene            complement(7348..8439)
                     /gene="ipaC"
                     /locus_tag="OQQ26_001544"
     CDS             complement(7348..8439)
                     /gene="ipaC"
                     /locus_tag="OQQ26_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS translocon subunit IpaC"
                     /protein_id="HCS1857036.1"
                     /translation="MEIQNTKSTQILYTDISTKQTQSSSETQKSQNYQQIAAHIPLNV
                     GKNPVLTTTLNDDQLLKLSEQVQHDSEIIARLTDKKMKDLSEMSHTLTPENTLDISSL
                     SSNAVSLIISVAVLLSALRTAETKLGSQLSLIAFDATKSAAENIVRQGLAALSSSITG
                     AVTQVGITGIGAKKTHSGISDQKGALRKNLATAQSLEKELAGSKLGLNKQIDTNITSP
                     QTNSSTKFLGKNKLAPDNISLSTEHKTSLSSPDISLQDKIDTQRRTYELNTLSAQQKQ
                     NIGRATMDTSAVAGNISTSGGRYASALEEEEQLISQASSKQAEEASQVSKEASQATNQ
                     LIQKLLNIIDNINQSRSSTASQIAGNIRA"
     gene            complement(8459..10201)
                     /gene="ipaB"
                     /locus_tag="OQQ26_001545"
     CDS             complement(8459..10201)
                     /gene="ipaB"
                     /locus_tag="OQQ26_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocon subunit
                     IpaB"
                     /protein_id="HCS1857037.1"
                     /translation="MHNVNTTTTGLSLAKILASTELGDNTIQAANDAANKLFSLTIAD
                     LTANKNINTTNAHSTSNILIPELKAPKSLNASSQLTLLIGNLIQILGEKSLTALTNKI
                     TAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQ
                     IQTRLSELDPDSPEKKKLSREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLE
                     KEIDSFSAFSNTASAEQLSTQQKSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQ
                     SLQESRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTIVSVVAAAFSGGASL
                     ALAAVGLALMVTDAIVQAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVD
                     SKKAKMIGSILGAIAGALVLVAAVVLVATVGKQAAAKLAENIGKIIGKTLTDLIPKFL
                     KNFSSQLDDLITNAVARLNKFLGAAGDEVISKQIISTHLNQAVLLGESVNSATQAGGS
                     VASAVFQNSASTNLADLTLSKYQVEQLSKYISEAIEKFGQLQEVIADLLASMSNSQAN
                     RTDVAKAILQQTTA"
     gene            complement(10207..10674)
                     /gene="ipgC"
                     /locus_tag="OQQ26_001546"
     CDS             complement(10207..10674)
                     /gene="ipgC"
                     /locus_tag="OQQ26_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SycD/LcrH family type III secretion system
                     chaperone IpgC"
                     /protein_id="HCS1857038.1"
                     /translation="MSLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAY
                     DFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN
                     DYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIKE"
     gene            complement(10732..11358)
                     /gene="ipgB1"
                     /locus_tag="OQQ26_001547"
     CDS             complement(10732..11358)
                     /gene="ipgB1"
                     /locus_tag="OQQ26_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion effector IpgB1"
                     /protein_id="HCS1857039.1"
                     /translation="MQILNKILPQVEFAIPRPSFNSLSYNKLVKKILSVFNLKQRFPQ
                     KNFGCSVNINKIRDNVIDKIKDSNSGNQLFCWMSQERTSYVSSMINRSIDEMAIHNGV
                     VLTSDNKKNIFAAIEKKFPDIKLDEKSAQTSISHTALNEIASSGLRAKILKRYSSDMD
                     LFNTQMKDLTNLVSSSVYDKIFNESTKVLQIEISAEVLKAVYRQSNTN"
     gene            complement(11374..11763)
                     /gene="ipgA"
                     /locus_tag="OQQ26_001548"
     CDS             complement(11374..11763)
                     /gene="ipgA"
                     /locus_tag="OQQ26_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgA"
                     /protein_id="HCS1857040.1"
                     /translation="MCRKLYDKLYEITGAKLDFNDKNQAFILLEEQIPVCITDNDEYI
                     FLTGLLNEHELFTENIINPEHILILNYSLSRDYGSSICLLPDTHQCVLTKKHYKKYLS
                     PDELIESLYEFLFCIKLTIANITSEVN"
     gene            complement(11776..13260)
                     /gene="icsB"
                     /locus_tag="OQQ26_001549"
     CDS             complement(11776..13260)
                     /gene="icsB"
                     /locus_tag="OQQ26_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector IcsB"
                     /protein_id="HCS1857041.1"
                     /translation="MILKISNFIDASNTKGPIRVEDTEHGPILVAQKFNLKDLFFRTL
                     STINAKINSQILNEQLKNYRLANQKSLLLFLKTLASEKSAESAFAAYEAVKNSIQHSF
                     TGKDIKLMLNTAERFHGIGTAKNLERHLVFRCWGNRGITHLGHTSISIKNNLLQEPTH
                     TYLSWYPGGNVTKDTEINYLFEKRSGYSVDTYKQDKLNMISDQTAERLDAGQEVRNLL
                     NSKQDQNNNKKIFFPRANQKKDPYGYWGVSADKVYIPLSGDNKTKDGKISYNLFGLDE
                     TNMSKFICQKKADAFRQLANYKLISKSENCAGMALNVLKAGNSEIYFPLPDVKLVATP
                     NNVYAYANKVRQRIESLNQSYNEIMKYIESDFDLSRLTQLRRSYLKSFNKINLIHTPK
                     TFKPLSISLYKHPTENVSSEDFDAVINACHSYLVKSAPSNMSRVLNELKTGATDKKEE
                     IIEKSIKTIDYYNSLKSPDLGTKLYIHDLLQVNKLLLNNSHSNI"
     gene            13574..15190
                     /locus_tag="OQQ26_001550"
     CDS             13574..15190
                     /locus_tag="OQQ26_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector inositol
                     phosphate phosphatase"
                     /protein_id="HCS1857042.1"
                     /translation="MHITNLGLHQVSFQSGDSYKGAEETGKQKGVSVISYQRVKNGER
                     NKGVEALNRLYLQNQTSLTGKGLLFARDRAAVFYEAIKLAGGDTSKIKAMMEQLDTYK
                     LGEVDKRNINELNKVISEEIRAQLGIKNKKELQSEIKQIFTNFLNNKNWEPINKNINY
                     HGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESQHIANMWLSKVVDDEGKE
                     IFSGIRHGVISAYGLKKNSSERAVAARNKAEELASAALYSRRELLSQALSGKTVDLKI
                     VSTSLLTPTSLTGGEESMLKDQVKALKGLNSKRGEPTKLLIRNSDGLLQEVNVNLKVV
                     TFNFGVNELALKMGLGWRNVDKLNGESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKN
                     DVIYLANQIKEIINKKLQKNDNGEPYKLSQRMALLAYTIGAVPCWNCKSGKDRTGMQD
                     AEIKREIIRKHETGQFSQLNSKLSSEEKRLFSTILMNSGNMEIQEMNTGVPGNKVMKK
                     LPLSSLELSYAERIGDPKIWNMVKGYSSFV"
     gene            15200..15562
                     /gene="ipgE"
                     /locus_tag="OQQ26_001551"
     CDS             15200..15562
                     /gene="ipgE"
                     /locus_tag="OQQ26_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgE"
                     /protein_id="HCS1857043.1"
                     /translation="MEDLADVICRALGIPSIDTDDQAIMLDDDVLIYIEKEGDSINLL
                     CPFCALPENINDLIYALSLNYSEKICLATDDEGGSLIARLDLTGINEFEDIYVNTEYY
                     ISRVRWLKDEFARRMKGY"
     gene            15562..16020
                     /gene="ipgF"
                     /locus_tag="OQQ26_001552"
     CDS             15562..16020
                     /gene="ipgF"
                     /locus_tag="OQQ26_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system lytic transglycosylase
                     IpgF"
                     /protein_id="HCS1857044.1"
                     /translation="MSRFVFILLCFIPYLGRADCWDKAGERYNIPSSLLKAIAEKESR
                     FNKSAVNVNNNGSKDYGIMQINDFHSKRLREMGYTEEMLISHPCLSVHYAAKLLNEFM
                     LMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYKRYLRIAAESKQNNRRI"
     gene            16029..17144
                     /gene="mxiG"
                     /locus_tag="OQQ26_001553"
     CDS             16029..17144
                     /gene="mxiG"
                     /locus_tag="OQQ26_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiG"
                     /protein_id="HCS1857045.1"
                     /translation="MSEAKNSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETL
                     EFGNDNFPENIIPVTDSKSDGIIYLAISKDNICQFSDEKGEQIDINSQFNSFEYDGVS
                     FQLKNMMEDKSRVHIPNGMYNKPSVFFFFAVIVVLIIIFSLSLKKDEVKEIAEIIDDK
                     RYGIVNTGQCNYILAETQNDAVWASVALNKTGFTKCRYILVSNKEINRIQQYINQRFP
                     YINLYVLNLVSDKAELLVFLSKERNSSKDTELEKLKNALIVEFPYIKNIKFNYLSDHN
                     AREDAKGIFTKVNVQYKEICGTNKVTYSVREELTDEKLELINRLISDHKNVYGDQYIE
                     FSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFFLDKNK"
     gene            17152..17403
                     /locus_tag="OQQ26_001554"
     CDS             17152..17403
                     /locus_tag="OQQ26_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscF/YscF/HrpA family type III secretion system
                     needle major subunit"
                     /protein_id="HCS1857046.1"
                     /translation="MSVTVPDKDWTLSSLSETFDDGTQTLQGELTSALDALARNPSNP
                     QLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR"
     gene            17416..17709
                     /gene="mxiI"
                     /locus_tag="OQQ26_001555"
     CDS             17416..17709
                     /gene="mxiI"
                     /locus_tag="OQQ26_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod protein
                     MxiI"
                     /protein_id="HCS1857047.1"
                     /translation="MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQ
                     VSQIMEMVGNPESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS"
     gene            17715..18440
                     /gene="mxiJ"
                     /locus_tag="OQQ26_001556"
     CDS             17715..18440
                     /gene="mxiJ"
                     /locus_tag="OQQ26_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctJ family type III secretion inner membrane
                     ring lipoprotein Mxi"
                     /protein_id="HCS1857048.1"
                     /translation="MIRYKGFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHN
                     ITARKVDGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPRAE
                     KARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVIAIYDSPKESE
                     LLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPVKEIKSEFLTNEVIYVFLG
                     MAVLVVILLVWAFKTGWFKRNKI"
     gene            18437..18964
                     /locus_tag="OQQ26_001557"
     CDS             18437..18964
                     /locus_tag="OQQ26_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion apparatus protein OrgA/MxiK"
                     /protein_id="HCS1857049.1"
                     /translation="MIRMDGIYKKYLSIIFDPAFYINRNRLNLPSELLENGVIRSEIN
                     NLIINKYDLNCDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGK
                     ISKQGEAAIRSGFWHLIAWKENISVGIYERINLLFNPIALEGNYTPVERNLSRLNEGM
                     QYAKRHFTGIQTSCL"
     gene            18906..19601
                     /gene="mxiN"
                     /locus_tag="OQQ26_001558"
     CDS             18906..19601
                     /gene="mxiN"
                     /locus_tag="OQQ26_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mxi-Spa type III secretion system linker protein
                     MxiN"
                     /protein_id="HCS1857050.1"
                     /translation="MKVCNMQKGTLPVSRHHAYDGVVIKRIEKELCKTIKDRDTESKK
                     KAICVIKDATKKAESLRIDAVCDGYQIGIQTAFEHIIDYICEWKLKQNENRRNIEDYI
                     TSLLSENLHDERIINTLLEQWLSSLRNTVTELKVVLPKCNLALRKKLELDLHKYRSDV
                     KIILKYSEGNNYIFCSGNQVVEFSPQDVISGVKIELAEKLTKNDKKYFKELAHKKLRQ
                     IAEDLLKENPVND"
     gene            19594..20001
                     /gene="mxiM"
                     /locus_tag="OQQ26_001559"
     CDS             19594..20001
                     /gene="mxiM"
                     /locus_tag="OQQ26_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000609865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiM"
                     /protein_id="HCS1857051.1"
                     /translation="MINQINASNALQQRLNSEEFVNLNERLSSSQSFDEDIIYEIMQY
                     FSQSELNSIDNDELHNKIEQLFNSRFPYLTAAQKSSLLNKLIDANQYVDLHEGFYASL
                     SIYNNIDFYIKTTTFDSLINVFEAGREADDSTW"
     gene            19985..20413
                     /gene="mxiM"
                     /locus_tag="OQQ26_001560"
     CDS             19985..20413
                     /gene="mxiM"
                     /locus_tag="OQQ26_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system pilotin MxiM"
                     /protein_id="HCS1857052.1"
                     /translation="MIRHGSNKLKIFILSILLLTLSGCALKSSSNSEKEWHIVPVSKD
                     YFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKI
                     AIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI"
     gene            20543..21175
                     /gene="mxiE"
                     /locus_tag="OQQ26_001561"
     CDS             20543..21175
                     /gene="mxiE"
                     /locus_tag="OQQ26_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system transcriptional
                     activator MxiE"
                     /protein_id="HCS1857053.1"
                     /translation="MEGFFFVRNQNIKFSDNVNYHYRFNINSCAKFLAFWDYFSGALV
                     EHSHAEKCIHFYHENDLRDSCNTESMLDKLMLRFIFSSDQNVSNALAMIRMTESYHLV
                     LYLLRTIEKEKEVRIKSLTEHYGVSEAYFRSLCRKALGAKVKEQLNTWRLVNGLLDVF
                     LHNQTITSAAMNNGYASTSHFSNEIKTRLGFSARELSNITFLVKKINEKI"
     gene            21162..22862
                     /gene="mxiD"
                     /locus_tag="OQQ26_001562"
     CDS             21162..22862
                     /gene="mxiD"
                     /locus_tag="OQQ26_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system secretin MxiD"
                     /protein_id="HCS1857054.1"
                     /translation="MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDT
                     VGSFFERFSALLNYPVVVSKQAAKKRISGEFDLSNPEEMLEKLTLLVGLIWYKDGNAL
                     YIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
                     LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLL
                     NNGKALSNRQAKNDPMPPFNITQKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSIL
                     VKGNDQQIQIIRDIITQLDVAKRHIELSLWIIDIDKSELNNLGVNWQGTASFGDSFGA
                     SFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVS
                     LVGERNSSLEHVTYGTLINVIPRFSSRGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
                     EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFKYKTSNISN
                     IVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSLVSYLNY
                     "
     gene            22881..23948
                     /gene="mxiC"
                     /locus_tag="OQQ26_001563"
     CDS             22881..23948
                     /gene="mxiC"
                     /locus_tag="OQQ26_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system gatekeeper subunit
                     MxiC"
                     /protein_id="HCS1857055.1"
                     /translation="MLDVKNTGVFSSAFIDKLNAMTNSDDGDETADAELDSGLANSKY
                     IDSSDEMASALSSFINRRDLEKLKGTNSDSQERILDGEEDEINHKIFDLKRTLKDNLP
                     LDQDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVESLTKIINEIISGSEKSVNAG
                     INSAIQAKLFGNKMKLEPQLLRACYRGFIMGNISTTDQYIEWLGNFGFNHRHTIVNFV
                     EQSLIVDMDSEKPSCNAYEFGFVLSKLIAIKMIRTSDVIFMKKLESSSLLKDGSLSAE
                     QLLLTLLYIFQYPSESEQILTSVIDVSRASHEDSVVYQTYLSSVNESPHDIFKSESER
                     EIAINILRELVTSAYKKELSR"
     gene            23961..26021
                     /gene="mxiA"
                     /locus_tag="OQQ26_001564"
                     /gene_synonym="virH"
     CDS             23961..26021
                     /gene="mxiA"
                     /locus_tag="OQQ26_001564"
                     /gene_synonym="virH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein MxiA"
                     /protein_id="HCS1857056.1"
                     /translation="MIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLN
                     IVLAILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKIITTF
                     GQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
                     AGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIGGISVGMSQ
                     HGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDSDNMGRNIMSQIFG
                     NPFVLIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYT
                     GTFDIDNSHDSSLAMIENLDAISSETVPLILLFAENKISANDMEGLIERIRSQFFIDY
                     GVRLPTILYRTSNELKVDDIVLLINEVRADSFNIYFNKVCITDENGDIDALGIPVVST
                     SYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIFGIQETKNMLD
                     QFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREKDVIT
                     LVEHVRASLSRYICSKIAVSGEIKVVMLSGYIEDAIRKGIRQTSGGSFLNMDIEVSDE
                     VMETLAHALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINV
                     LKTI"
     gene            26034..26435
                     /gene="spa15"
                     /locus_tag="OQQ26_001565"
                     /gene_synonym="spaK"
     CDS             26034..26435
                     /gene="spa15"
                     /locus_tag="OQQ26_001565"
                     /gene_synonym="spaK"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone Spa15/SpaK"
                     /protein_id="HCS1857057.1"
                     /translation="MSNINLVQLVRDSLFTIGCPPSIITDLDSHSAITISLDSMPAIN
                     IALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSDEYLQLRV
                     VIKDDYVHDGIVFAEILHEFYQRMEILNEVL"
     gene            26439..27731
                     /gene="spaL"
                     /locus_tag="OQQ26_001566"
                     /gene_synonym="mxiB"
                     /gene_synonym="spa47"
     CDS             26439..27731
                     /gene="spaL"
                     /locus_tag="OQQ26_001566"
                     /gene_synonym="mxiB"
                     /gene_synonym="spa47"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system ATPase SpaL"
                     /protein_id="HCS1857058.1"
                     /translation="MSYIKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNE
                     IIARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEV
                     TDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEGQRMGIFAS
                     AGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKSRCVLVYATSDY
                     SSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPV
                     SVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLA
                     QKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENA
                     SQDKIYNKISVVESFLKQDYRLGFTYEQTMELIGETIR"
     gene            27824..28162
                     /gene="spa13"
                     /locus_tag="OQQ26_001567"
                     /gene_synonym="spaM"
     CDS             27824..28162
                     /gene="spa13"
                     /locus_tag="OQQ26_001567"
                     /gene_synonym="spaM"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858283.1"
                     /note="Not similar to SpaM from Salmonella T3SS; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein Spa13"
                     /protein_id="HCS1857059.1"
                     /translation="MEALDKRIIYFLQLENDLEPVGAQSVSQLFNTRRKIAIVKKHII
                     QYQSERILLKGRIEEIQKDIDEANASKRKLLHKESKICKRIGLIKRNNFAKQLILDEL
                     SQEDMKYGIR"
     gene            28149..29027
                     /gene="spa32"
                     /locus_tag="OQQ26_001568"
     CDS             28149..29027
                     /gene="spa32"
                     /locus_tag="OQQ26_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle length
                     regulator Spa32"
                     /protein_id="HCS1857060.1"
                     /translation="MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEY
                     SLIASNYFTIDKHFEHKHDKGEIYSGIKNAFELRNERATYSDIPESMAIKENILIPDQ
                     DIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVNPDNLLESDNRNGQIGLKNHS
                     LSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDKNVFQKNSE
                     MTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKG
                     NKNNSTGYNEQSEEEC"
     gene            29021..29902
                     /gene="spa33"
                     /locus_tag="OQQ26_001569"
                     /gene_synonym="spaO"
     CDS             29021..29902
                     /gene="spa33"
                     /locus_tag="OQQ26_001569"
                     /gene_synonym="spaO"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000944309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SctQ family type III secretion system ring
                     protein Spa33"
                     /protein_id="HCS1857061.1"
                     /translation="MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLT
                     SVCGDWVIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSNKITF
                     RITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEFCLGSSNVRLA
                     TLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKINLSESNGESDHTEVSLAL
                     FNYDDINVKVDFILLEKKMTINELKMYVENELFKFPDDIVKHVNIKVNGSLVGHGELV
                     SIEDGYGIEISSWMVKE"
     gene            29907..30557
                     /gene="spa24"
                     /locus_tag="OQQ26_001570"
                     /gene_synonym="spaP"
     CDS             29907..30557
                     /gene="spa24"
                     /locus_tag="OQQ26_001570"
                     /gene_synonym="spaP"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein Spa24/SpaP"
                     /protein_id="HCS1857062.1"
                     /translation="MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQ
                     QVPSNMTLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQY
                     LKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDAFKIGFYLYLP
                     FIVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA"
     gene            30572..30832
                     /gene="spaQ"
                     /locus_tag="OQQ26_001571"
     CDS             30572..30832
                     /gene="spaQ"
                     /locus_tag="OQQ26_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaQ"
                     /protein_id="HCS1857063.1"
                     /translation="MSDIVYMGNKALYLILIFSLWPVGIATVIGLTIGLLQTVTQLQE
                     QTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMFLIKSGV"
     gene            30832..31602
                     /gene="spa29"
                     /locus_tag="OQQ26_001572"
                     /gene_synonym="spaR"
     CDS             30832..31602
                     /gene="spa29"
                     /locus_tag="OQQ26_001572"
                     /gene_synonym="spaR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858288.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein Spa29/SpaR"
                     /protein_id="HCS1857064.1"
                     /translation="MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIR
                     IPVIFLVASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVGSI
                     IDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILESIQLSYNICPL
                     FSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQMNAFSVSLT
                     IKSLLAIFIVFICSSTIYFSKVQFFLGEHKFFTNLFVR"
     gene            31609..32637
                     /gene="spa40"
                     /locus_tag="OQQ26_001573"
                     /gene_synonym="spaS"
     CDS             31609..32637
                     /gene="spa40"
                     /locus_tag="OQQ26_001573"
                     /gene_synonym="spaS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     switch protein Spa40/SpaS"
                     /protein_id="HCS1857065.1"
                     /translation="MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISF
                     FSLSDVMLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQTKF
                     VLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYFFWINDRKIIF
                     SQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKRE
                     YIEQEGHFETKSRRRELHIEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPF
                     ISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVW
                     LEQVENTH"
     gene            32650..32892
                     /locus_tag="OQQ26_001574"
     CDS             32650..32892
                     /locus_tag="OQQ26_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857066.1"
                     /translation="MCYMGVNFCNKIGIDQSEFEIESSIINSIANEVLNPISFLSNKD
                     IINVLLRKISSECDLVRKDIYRCALELVVEKTPDDL"
BASE COUNT        10481 a         4871 c         6719 g        11485 t
ORIGIN      
        1 ttgttgactg cctgtgcggc atctggtatc aaggtggcgt gaagccggtt caggttctca
       61 tgcggaacgt tggaacctat atccccccga taccaaaggc gaaatgtaag tgacaaaatg
      121 caatgaacac gttctccgtt aactgagggg catggtgata aataaaggta aatgcagaag
      181 gtgtagagtc tcgcagattt ctgacatcat agagcctaac attagatgca taacgctaca
      241 gattgtagaa tctctacagg tgaaatatac actggttggc gtttatgtcg caaaacatgt
      301 cattcaggtt catctcacca ataaggatat gagtgaagtg gaggataagt gagtctgctg
      361 tcagagtttt ctggtgtatg tcagtaactg cgaaccatgt ctgcttgata tgggagctta
      421 tggaggctct ctgtacaagg ttagggagct aacaaagcag ggataaaaag tccgcctgat
      481 gcaggcacgg ttcgttaaat cttttgccat tggtaacaaa atggtgcgat gaatgttcag
      541 gctatcttta tcttgatggt ggttcagctg tttggtaaag aaatcgctgt aacaatagaa
      601 gaactgcagg cagtactggt cccacatcgt ttgctcagtc aactggtgaa gttccgtagc
      661 gcgtaaatta atgctttgca tgaaacgtta ctggagtgga tgaaagaata cctgcatata
      721 tcattactgc gttggattac cagtacaaca gattgaatga actggacatg ttgatagacg
      781 gcattgaaaa gcagcttata agcatagtgc ggcagagtta attggagagc acttcgcctt
      841 ctgagtatta agtaagcatg gtggtacctg cggatactat ctattcactg tgctcggtcg
      901 gcagccttac tgaccaagga gttgggggag ttgataacaa agttgaaaaa acagctctca
      961 accaaggtgg ttattgtaac aatagcaaat aagctggtgt gacctgtatc acaataaccg
     1021 attatggacg taaatacgac aaaaatatgt cagtatcagg cggtattaat tgctgatgct
     1081 gatggacatt aactcttaat aaaagggtgg atgctgaaag gttgttatgg tgacggacgt
     1141 gatgacgacg gaaaagagta tgaggttttg gatttaaagt tcgttcgggg aataaggacc
     1201 cggtcagcta attctcatag tagttcgcat tgctggatgc aatactgtgc tgcaattact
     1261 cgtcgatgtc ggaacaacgg aagccttgca aacggggatg tattcataca ggtgttatgt
     1321 tatatggggt tttattgcag ggggctatac caagagaata tatgatatct catcagactg
     1381 atgtgagggt aaatgagaat agagtaaacg aacaaggttg ttttttggcg aggaagcaga
     1441 tgtatgacaa ttcttgtgga gctgccagtt tactctgtgc tgcaaaggaa ttaggggttg
     1501 ataaaatacc acaatacaaa gggtctatgt ccgaaatgac aaggaagagt tctcttgatt
     1561 tggataatcg ttgtgagcgg gatttatact taataactag tggtaattat aatccgagaa
     1621 tacacaaaga taatatcgcg gatgccggtt attctatgcc tgataagata gtcatggcta
     1681 cgaggcttct tggattgaat gcttatgtcg ttgaagaaag taacattttt tcgcaagtaa
     1741 ttagttttat ttatcccgat gcaagggact tattaattgg catgggatgt aatatagtac
     1801 atcaacgaga tgtgttatct tctaaccaaa gagttttgga agctgttgct gtatccttta
     1861 ttggagttcc tgtcggcctc cactgggtgt tgtgtagacc tgatggaagc tatatggatc
     1921 cagctgtagg agaaaattat tcttgttttt caactatgga attaggtgca agaagaagta
     1981 attctaactt tataggatat actaaaatag gtatttccat agttataact aatgaggctt
     2041 tgtaaattgt cgttttttat ctgtgaagga gcttgaatat tttggggtgg ggggcataac
     2101 aaatgatatt actgagtaca aatttagcta tattgggcgg attagttgtg tgggaagacg
     2161 aaatgtttct cttgaaataa gtgaactccc tcaaggaatg attgtgtgct taaatattta
     2221 agtgctggta agtttgagaa ggctgacata ttttgcagag caaacagtga ttgacttgga
     2281 tgatattttt attttagtca ctcgttgtaa ttcgagtatg ctttatttta tttgaaaatg
     2341 gatgtatttt atacccgcaa tttaaactgt aagccctatg aggggtatgg atattataag
     2401 ttactctttg actaagcata acttttgggg ttagaaaaat aaatctcttg ttaataatta
     2461 atatgatttt aaaatcaaac ttgtttataa ttataaaata atgtaagtcg gtcattttat
     2521 gggaagatta ggagaataaa acagtaatta tatttgagaa atctgctaat atattcttaa
     2581 agcttttttg atactgtgaa cgaagtctgt taatggtgga ttttttgttt atcaccatgt
     2641 aaaaaaattg agtagtaaaa gcgttgactg ctaatcctcg ctgtttttat tgaaacgatt
     2701 aaaaatacgc tgaatatttt cggccagtca ctcatcttca cataaaattt tgaccatcat
     2761 gccgcatccc ttagttgcac aattcatttt caatgatatg aatattacta atttcaccag
     2821 ataatgttct cgtggtcagc agggtatgag ttttcaccgt aattttaagg aaacacagtg
     2881 cgtggggatt gaataacaga tagccgacgg aattacccca ccggctgaaa gtcaagttca
     2941 acgaagattt ttattatctg aattgggcag tttacatcag tgttcgatgt ttatgaagac
     3001 gatagatggc gagaaattat atcccgaata gcttcatcta tttctctctg aactgttttg
     3061 tttattttag ataatgtaaa tattagagtt ctgtttgttt tattctcttt tctttttatg
     3121 taagtccgtt tgtctttaga aataaataac gagtcaactt ttagcgaagg gttttgcttt
     3181 ctgtttttgc ttttctttat gatgtttaaa atttcttttt tatatatgtc cgggggcaaa
     3241 tttgtatcaa ggtcttttat ttcttccttt aatattggta gtgtagaact aagagattca
     3301 ttagcctttt caagtccttt ataataattg aataatatct tgtagtcatt aaagttaagt
     3361 tctgacgcga ttggaaatag agatattatt tcctgtggaa cgcttgccgc ctgaaaggca
     3421 cgagtgactt tcgcgcgaga cagattctct tttttggcta tgtctttata ggacatccct
     3481 gatactttca gaaaattaag accaatacca agttctcgga tgctatgctc ttttgctgtt
     3541 tgtatatcgt ttgctagttt tctggcatca agagtagata tatattcttt tgaatataga
     3601 acttcaagat ctgctcctgc atatattgca gatgctcttc tacgagtgcc atccagaatt
     3661 tcaattctac catcaatctc ccttcctatt acagggaaga attgttgtag ctttatagtt
     3721 tttatgatat cggctaatga ttcttctgtt agggattctt gatcgcgtac attcgttttt
     3781 tggttgacga aggttaaatc ttggatcctt ttatgaggaa tcttggcttt gataaaggaa
     3841 actttattac cagaatggag tgtaaactct ttcttttggc cttcctttat acttaacaag
     3901 tcgttgcaca aatccaccat atcacaccct gtttattcat attgattcat attgacaaaa
     3961 gttaaatgca gtgtgagcaa aattgtatgt aactgttgat gatagtcaac ggtagtctta
     4021 aaaattacta ttttaatagc tggattgatg caatttatct ttattggata aaagaataat
     4081 attcttgtgg agctctgatg tgagagctcc atagatgaaa aaatgcttat caattactat
     4141 attgattttg tattattttt gactacagaa ataagatctc caatagtaat aatgtgttct
     4201 aatgcagatt catctatacg tagattgaac tcaaaactaa tcatatccag catttcaatc
     4261 agagaaagag aatcggcaga aagatcttca ataaatttag tttcttcaga tagtttgctg
     4321 tacgctatac catagcaaaa ggccactatt gataatattt tttcttttat catattttaa
     4381 tccttattga tattctttaa tacttttgat agggaagtgg ttacatcttt tgctgcttta
     4441 tatatattat tgttttcagc tgtaatatta ttgttatttt ttaaatcaga tatatcatct
     4501 gtaagtaatt ctgcagaggt atcgtcaatt tttgacaata ccttgctgag ggcgctagat
     4561 acttcttttg ccttttcata gatcgcatga tttttatcaa ttgtatctgc gttggtttct
     4621 gttacgtagt ttattgtatt tgcatctgta actgcatctg taacttttaa tttgttgttt
     4681 attctgtgtt ctgttgtgga ttttgtaatg tcctttgatt tttcctgtaa ctctcgttct
     4741 tgtgttcctg atttagttcc aatgagagat ataagattac ttagggagtt tgttactttt
     4801 tttgaagctt caaatatcgt ttcccgtgtt aaatatgtgt ctccatttct tgataaaaaa
     4861 tcagtctgaa gtacttttga atcagtgttt gagttgaatt tattgatttg cgaagctact
     4921 ctatgagaaa gagaagcgct acttttagtt gtatctgatg agttatcatt actgcttgtc
     4981 actccttccg ggtggagagg gggggtggtt gaagagttct gtatgttcag aggcctgtgt
     5041 ccccgagaaa gagagttatt tgcagatctt tcttgactac tcgtagttaa caggtctgaa
     5101 cctattccat ccgaattatc tggagtatgg ttgaaaacct tttctaaagc tgaattattt
     5161 gcaaatgtct ggacagtatc tgatatagag tgtggtagaa cggaagttac tttttgaact
     5221 agtgctcttt gtggatttag taatgagttt ccgttacggg ataatagatc gtttgtctga
     5281 gaagtaggag actgtgcatc attttctggg ttctcgtgat agctattgtc atatactctg
     5341 ttgtcaaaaa ctctattatc gtaagttcta ttatcattat ttatatgata gtgaattaca
     5401 ggttgggatg ttttctcatt ggctccgggg gttggtccgc catctggcat atcttcggga
     5461 ggtgtaggga ggccatcttg gataggatgc gaatctttta tatcttctaa aatatcatta
     5521 aggacttttc tcaacagctc aggaaacacg gctactgtat ttaagtctct tgacagttta
     5581 cctataccaa atcctttact atcaatagta tttttacgtt gattgcgcaa actatcaaag
     5641 gcaagttttg cctgtgcgtc aactaaatca tctagtttga gagatgaaac agtttcatta
     5701 cttaacttta attcagcaag aatattattc ttgataaatg atgatacttc agtattgagg
     5761 agtttttgtc ccaatgataa agcttcacca gatgtgtgtt gttgtgctaa tagtgcaagt
     5821 ctgtgctcaa tgttttgtcg taattgatgg agtttcttat tctttgccga ccatggtcca
     5881 aaggcagaat cttgggataa tttatctttt ataattagtt ccgaatactg tgcgacaatt
     5941 ttttgaagtc ccttttcgtt ttcaaaatta agaccatttt gatgtactaa ggagtacaaa
     6001 acatttgaaa attcgagaat ctcgcttttg gcatacgcat tcattgagtt ggaataaatg
     6061 cttcttaaca catcttcttt ccctgaggaa gaaaataaaa aatcaagaca tttctgatta
     6121 aaagacgttg caaagttttc tttttcagac actgatgctg gtgtttttag agaagtttgc
     6181 gaactatgga tatcggatat tttgcttttt aactcgctgt attctgttga tgatggtgaa
     6241 gttgccttat ataagaatgt tggcgcttga gtattattta cattatgcat ggcacacctc
     6301 agaaatggag aaaaagttta tctgtatctg tacatgagct tattgtacta ctcaaaacct
     6361 ttactaaatt atcaaaaata ctattggcat tactgtattt ttgaactaaa gtttgaagat
     6421 tatttttcat tgtttcatct tcggcagaga atccggcatt ccatgcctga tattttgcat
     6481 tatctagcac aacctcgtca gttgtaccta gcttatctaa gctgtttaac atattattta
     6541 ttggggtcat gtttatactg acaacatatc ccccgttttt tgcagatacc gtgccgattg
     6601 ttccacctaa ttctgtaagc catttatttg cttcttgctc actaacagta ttagttgctg
     6661 gatatagcgg tttatcttca tagtttttct tgagtgttgt caatgcgtct ttaagcgact
     6721 tgacttgtaa tttcacggag tttccgtcgt tacctccggg agagatccag ccggcaagac
     6781 tggaaagaac agcgctaaat tcttgataca tttgagtata tgaactaacg gcatgttcat
     6841 atactttcag atactgttca ttaatatcat tgatggagtt tgcaatttta gcccacagtt
     6901 ctctatgaga tatcatttca tatccatcaa gctcagcttc tttcggggct gaatgtaata
     6961 attctcttgc gtctttatta attggatatt ctgtcttgga aagaatattc aatagttgag
     7021 cggatttgtt tacatccatg ctaatctgag atgaatgtaa tgctatttct tctagcgatg
     7081 ttttagtcaa cgttttttgt gaaagctctt tctttaatgc ctgatttgtt gttctgatat
     7141 tatgaagggt gtcgttgagc atagtaaggg aacttacagg atgagaactg gtcgttgttt
     7201 ttatatcaga attaactgtt tcggttgatg aaccgttggt attgtttggg ctgaatgatg
     7261 aggtggaaat actattagtc aaagttgtta tattcatggt tatttcctta caggaagagc
     7321 catatattat tatggctctt ggatatatta agctcgaatg ttaccagcaa tctgactggc
     7381 tgtagaactc cttgattggt tgatgttgtc aattatattc agtaattttt gtattaattg
     7441 atttgtcgct tgggatgctt ctttagatac ttgggatgct tcctctgctt gtttactgct
     7501 ggcctgactg attagttgtt cttcttcttc aagagcagat gcataacgcc ctcctgatgt
     7561 ggatatatta ccagcaacgg ctgatgtgtc cattgttgca cggccaatgt tttgtttttg
     7621 ctgcgcagaa agggtattga gctcgtaagt tcttctctgg gtgtcaattt tatcctgcaa
     7681 agaaatatcg ggagaactaa gagaagtttt atgttcagtt gacagggata tattatctgg
     7741 cgccagttta tttttaccta aaaattttgt gctagagtta gtttgtggtg aggtgatatt
     7801 tgtatctatt tgtttattta accctaattt agaacctgca agctcttttt caagagattg
     7861 agcagtggca aggttctttc ttaaggctcc tttttggtcg ctaatccctg aatgcgtttt
     7921 tttggcaccg atacccgtta tacctacttg tgtgactgct ccagtaatgc ttgatgatag
     7981 ggctgccagg ccttgccgaa caatgttctc tgcagctgat tttgtagcat cgaacgcaat
     8041 caatgacaat tgagagccca atttagtttc tgcagtgcgg agagcagaaa gtagaacggc
     8101 tacactaata attaaagaaa cagcattaga agaaagactg gaaatatcca gagtgttctc
     8161 tggagtaagg gtgtgactca tctctgaaag atctttcatc tttttgtcag taaggcgagc
     8221 aatgatttct gaatcatgct gaacctgctc tgataacttt aaaagttgat catcatttaa
     8281 tgtggttgtt aatacgggat ttttaccgac attaagtgga atatgcgctg caatctgctg
     8341 ataattttgt gatttttgtg tttcggaaga actttgagtt tgttttgtgg atatatctgt
     8401 atataaaatc tgggttgatt ttgtgttttg aatttccata acattctcct tatttgtatc
     8461 aagcagtagt ttgttgcaaa attgcttttg caacatcagt tctattagcc tgagagttgg
     8521 acattgaggc taatagatct gcaattactt cctgcaattg gccgaatttt tctattgctt
     8581 cactgatata ttttgacagt tgttcaactt gatatttcga taatgtcagg tctgctagat
     8641 ttgtcgacgc gctgttctgg aaaacagcag aagcgacact tcctcccgct tgtgtggcag
     8701 agttaacact ttctcctaat aaaactgctt ggtttaaatg ggtggaaata atttgtttgg
     8761 atattacttc atcacccgct gcaccaagaa atttatttaa tctggcaaca gcattagtga
     8821 ttaaatcgtc cagttgagaa gaaaaattct tgagaaactt tggtataagg tctgtgaggg
     8881 ttttacctat tattttgcca atattctctg caagttttgc tgctgcctgt ttaccaacag
     8941 tggctacgag aacgactgct gcaaccagga caagagcgcc tgcgattgcc cccagaatag
     9001 agccaatcat tttggctttt ttcgagtcga cgcccaagcc ttcgagcatt tttgtaaatg
     9061 catctgaaag gagtttgatt aagggttcaa tgactgcttt catgatcgga ttcagggctt
     9121 gttccatgaa ggaattgccg gtcgctgctt gtactatagc atccgtaacc ataagagcta
     9181 aaccaacagc tgccagtgct agagaggctc ctccagaaaa agctgctgca acaacactaa
     9241 cgatagttaa aagtgcccca agtattttcc caacacaacc cattactctg ttgagttctt
     9301 ctgctttacg tacttcagca gcatactcat cagattttct ctccatttca gtttttcttg
     9361 attcttggag agactggaat agagccagat cattttttaa agattcttca ttattttttc
     9421 caactagttg aataaaggtt gccatcaatt gagtaacact ggcaagtccg gttaatgatt
     9481 tctgctgggt tgatagctgt tcagcagatg ctgtgtttga aaatgcagaa aaagagtcta
     9541 tttctttttc gagttgcatt gatttatctg taagtttgct atgaattgac agggttttct
     9601 gctcaatcaa tgtcctgtct ttaactgctg cgtctttttt gatagtgagt tgtatttctt
     9661 cccggcttaa ttttttcttt tctggtgaat ctgggtcgag ttcggataat cttgtttgaa
     9721 tttggttaat tttattttct aggtctttta ttttagaatc tgcgtttttt agtttattaa
     9781 tttgtttttc atagtctctg gttagtcctt cagtttcaga tagaagagta ttaattttat
     9841 cggagaattc taggtttttt tgctgtcttg cctgttgctg agacttccaa gcagtaattt
     9901 tatttgttaa tgcagttaaa gatttttcac cgagtatttg aataaggttt ccaattaaaa
     9961 gcgttagttg ggaacttgca tttaatgact ttggtgcttt aagttcaggg attaatatat
    10021 ttgaagttga gtgtgcatta gttgtattaa tatttttgtt agcagtaaga tcagcaattg
    10081 taagagaaaa taatttgtta gctgcatcat ttgcagcttg gatagtattg tctccaagct
    10141 cagtggaagc caatattttg gcaagagaca aaccagtggt tgtggtattt acattatgca
    10201 taataattac tccttgatat cctgaattgc gtccaagtat gattgtgctt ttatttttaa
    10261 tttttcatca ttgctgtgtt gaattacgag ttcgaagcac tctttggctt tcaagggggc
    10321 tttcaaccga agctggcatt gtccagtatg gaataccggt gtatagtcat tttttcctaa
    10381 tgcaaaagcg acagcataaa ggtctgctgc ttgttggaac tgttctttta tctgataaat
    10441 agctgcgagt cccataatgt agtctacatt gtaaaagtcg tatatacata aaaatctgaa
    10501 gaaaacttca gcttcctcta ttcttccttt gttgtaaaag tcataagcat atgaataaat
    10561 gtcatccatc atatcatcag gaattgcatt aatatctttc agtgtagcgc cagagttaat
    10621 tgcatcaatt actgcagtag agatgctttc attttcagtg atatttaaag acataaggtc
    10681 tcctttttgt ctgctttact ttaataagta taagatttaa tataaacaga tttaatttgt
    10741 attgctttga cggtatacgg cctttagaac ctctgcgctt atttctattt gtaaaacttt
    10801 tgttgattca ttaaatattt tatcgtagac ggaactggat actagatttg taagatcctt
    10861 catttgtgtg ttaaacaaat ccatgtcact gctatagcgt tttaaaatct ttgctctgag
    10921 gccagatgag gcaatctcgt ttagtgctgt atgactgata gatgtttgtg ctgatttttc
    10981 atcaagtttt atatccggga attttttttc aatagctgca aatatgtttt ttttgttatc
    11041 tgaggtcaaa acaactccat tgtgtatggc catttcatct atacttctgt ttatcattga
    11101 agagacataa gaggttcgct cttggctcat ccaacaaaat agttgattcc ccgaattact
    11161 atcttttatt ttgtctatga cgttgtccct gattttattt atattcaccg agcatccaaa
    11221 attcttctga ggaaagcgtt gttttaagtt aaaaacagat aatattttct ttacaagctt
    11281 attgtaactt aacgaattaa atgatgggcg aggaatcgcg aattcaacct gtggaagtat
    11341 tttgtttaga atttgcatga taccccctat atgttagttc acttctgaag tgatgtttgc
    11401 aatggttagt ttaatacaaa ataaaaattc atacaaagat tcaatgagct catcaggtga
    11461 aagatatttt ttgtagtgtt tcttggtcaa aacacattga tgagtatcag ggagaagaca
    11521 gatagaagaa ccataatctc tactcaaaga gtagttaagg atgagtatgt gttctggatt
    11581 aataatattt tctgtaaaaa gttcatgttc attaagaagt ccggtcaaaa agatgtattc
    11641 atcattatct gttatacaaa caggtatttg ttcttcgagc aatataaagg cttgattttt
    11701 atcgttaaaa tcaagctttg cacctgttat ttcataaagt ttatcatata gtttgcgaca
    11761 catttctatg gccttctata tattagaatg agagttattc aataaaagct tattgacctg
    11821 taataagtcg tgaatgtaaa gtttggttcc aagatctggc gatttaagag aattgtaata
    11881 atcaatagtt tttattgact tttcgataat ttcttctttt ttatctgttg ctccggtttt
    11941 taattcgttt aatacacgag acatattgct gggtgctgat tttactaagt atgagtggca
    12001 agcgttgatg accgcatcaa agtcttctga agatacattt tcagtaggat gtttgtaaag
    12061 tgaaattgat aaaggcttga atgtttttgg ggtgtggata aggttaattt tattgaaact
    12121 tttaagatag ctacgtcgta attgagtcaa tctggaaaga tcaaaatcag attcaatata
    12181 cttcattatc tcgttataag actgattgag actttcaatg cgttgcctaa ctttatttgc
    12241 atacgcgtat acattgttag gtgtagcaac caatttaacg tcagggagtg gaaagtatat
    12301 ttcagaattt cctgctttaa gaacattaag tgccatacca gcacagtttt cagatttact
    12361 gattaattta taatttgcca attgtctgaa agcatctgct ttcttttggc atataaattt
    12421 tgacatgttt gtttcatcaa ggccaaaaag gttatagctg attttaccat cctttgtttt
    12481 attatcacct gataatggaa tgtatacttt atcagcactg accccccaat aaccataggg
    12541 gtcttttttt tgattagctc tgggaaaaaa tatttttttg ttgttatttt gatcttgttt
    12601 tgaatttaat aagtttctaa cctcttggcc agcatcaagt ctttcggctg tttggtctga
    12661 aatcatattt agtttgtctt gtttataggt atcgacactg taacctgagc gtttttcaaa
    12721 aaggtagttt atttctgtat cttttgtaac attcccgccg ggataccagc tgagataggt
    12781 atgagttggt tcctgtagta aattgttttt tatactgata ctggtatgcc ctaaatgggt
    12841 tatgcctcta tttccccagc aacgaaaaac taaatgtctt tcaagatttt tggctgtacc
    12901 gatgccatga aaacgctctg cggtattcaa cattaatttg atgtctttac ctgtaaaaga
    12961 atgttgaatt gaatttttga ctgcttcata ggcggcaaac gcactttctg cagatttttc
    13021 gctagctaat gtcttgagga aaagcaataa ggatttttga ttcgctagtc gataattttt
    13081 tagttgttca tttaatatct gtgaatttat ctttgcatta atagtgctta atgttctgaa
    13141 aaagagatcc tttaggttga atttctgtgc taccaatata ggtccatgct ctgtatcttc
    13201 aacgcgtata ggcccttttg tattgcttgc gtcaatgaaa ttgctaattt tgagaatcat
    13261 actttattaa ctctccatta cgtggtgatt gtggggatgt aaaatgtatt tgatatataa
    13321 tatattcaat taataaattt agaaacttga gcctgttaac ataatcaaat tttcttttgt
    13381 tgtacataat atgtacctcg tgagcatatg tagtgctcgt ttcatcatga aatcccacaa
    13441 gttaaagtgt ctgatatatc aggctcggag tgttatagaa aaagagagaa cccagttgaa
    13501 taagtatctt ttttgttgta aaacgaggta caaaactgca atcaatgccc catttatgac
    13561 tgaggataat taaatgcaca taactaattt gggattgcat caggtttcat ttcaaagcgg
    13621 agattcctat aaaggcgcag aagaaaccgg aaaacaaaaa ggtgtaagcg tgatttcata
    13681 tcaaagagtt aaaaatggag agagaaataa gggggtcgaa gcgcttaatc gattatattt
    13741 acagaaccaa acaagcttaa cagggaaagg ccttttgttt gcgcgtgaca gagcagccgt
    13801 tttttacgag gcaataaagt tggcaggtgg tgatacgtca aaaattaaag ccatgatgga
    13861 acaattagat acctataaac ttggtgaagt tgataaaaga aatattaatg agcttaataa
    13921 agtaataagt gaagagataa gagcacagct aggcattaaa aataaaaagg aattgcaatc
    13981 ggaaataaaa caaatattta ctaatttttt aaataataag aattgggaac cgatcaacaa
    14041 aaatattaat tatcatggga aaaattatgg ttttcaatta acacccgcct ctcatatgaa
    14101 gatagggaat aaaaatatat ttgtcaaaga gtataatgga aaaggaattt gttgtgcttc
    14161 tacgagagag agtcagcata ttgcgaatat gtggctttca aaagtggtag atgacgaggg
    14221 gaaggaaatt ttttcgggta tcagacatgg agttatatca gcctatggat tgaaaaaaaa
    14281 ctcatctgaa agagctgttg ctgctcgtaa taaagctgag gagttagcaa gcgcagcatt
    14341 atatagcaga cgagaattat tatcacaggc tttgtctggt aaaacagtag atttaaagat
    14401 tgtttcgact tctcttctga cgccgaccag tttaactggg ggagaggaga gtatgttaaa
    14461 agatcaggta aaggcattaa aagggttaaa ctctaaaagg ggggaaccaa cgaaattatt
    14521 aattcggaat agtgatggtc ttctgcaaga agtaaacgtt aatctaaaag tggtgacatt
    14581 taactttggt gtaaatgaat tagcgctaaa aatgggctta ggctggagga atgttgacaa
    14641 gcttaatggt gaatcaatat gttctttgtt gggggataat ttcctcaaaa atggtgtgat
    14701 tggaggttgg gctgcagaag ctatagaaaa aaatccacca tgtaagaatg atgtgatata
    14761 tctggctaac cagataaaag agattataaa caagaagtta caaaaaaatg ataatggaga
    14821 gccgtataaa ttgtcacaaa gaatggctct attggcttat actataggtg ctgtaccttg
    14881 ctggaattgt aagagtggga aggacagaac aggtatgcag gatgctgaaa ttaaaagaga
    14941 aataataaga aaacatgaaa cagggcagtt ttctcaatta aatagtaaat tatcctcaga
    15001 agagaaaaga ttattttcta ctattctaat gaatagtggt aatatggaaa tccaagagat
    15061 gaatactggt gtgcctggaa ataaagttat gaaaaaatta ccgctatctt cgttagagct
    15121 gtcttatgct gaaagaatag gggaccccaa aatatggaat atggtgaaag ggtattcgtc
    15181 atttgtataa gaggaatata tggaagattt agcagatgtt atttgccgag ccttgggtat
    15241 cccttcaatt gataccgatg atcaagcaat catgcttgat gatgatgtgt taatatatat
    15301 tgaaaaagaa ggagattcaa taaatttatt atgccctttt tgtgcattgc ctgaaaatat
    15361 aaatgatctt atatatgcgt tgagcctaaa ttactcagaa aagatatgtt tagctactga
    15421 tgatgaaggt ggaagtctaa ttgcgcgatt agatcttacc gggataaatg aattcgagga
    15481 tatatatgtt aatacagaat attatatttc gcgtgtgcgt tggctgaagg atgaatttgc
    15541 gcgaagaatg aaggggtatt aatgtcccgt ttcgtattta ttttgctgtg ttttatccca
    15601 tatttaggga gagctgattg ttgggataag gctggtgaaa ggtacaacat tccatcgagt
    15661 ttgttaaaag cgattgcgga aaaagaatcc agatttaata aatctgcagt caatgttaat
    15721 aacaatggaa gtaaagatta tggtataatg caaataaatg actttcattc taaaagactt
    15781 agagaaatgg gatatactga ggaaatgcta attagtcatc catgtctttc tgtacattat
    15841 gcagcaaagt tattaaatga gtttatgctg atgtatggaa gagggtggga ggctgttggt
    15901 gcctataatg caggaacatc tccgaaaaag aaaaaagaaa gattaaagta cgcagaggat
    15961 atctataaac gctatttgcg gatagcagca gagagcaagc agaataatcg aaggatataa
    16021 gaggatttat gtctgaggca aagaactcaa atcttgcacc attcaggtta ttagtgaaac
    16081 tcacaaacgg tgtcggggat gagtttccgt tatattatgg gaataactta attgttctcg
    16141 gacggacgat agaaacactt gagtttggaa acgataattt cccagaaaat attattccag
    16201 taacagatag taaatcggat ggtataattt atttggccat aagtaaagat aatatctgtc
    16261 aatttagtga tgaaaaaggt gaacaaattg atatcaattc acaatttaac tcatttgaat
    16321 atgacggagt ttcttttcaa cttaaaaata tgatggagga taaatcgaga gttcatatac
    16381 caaacggaat gtataataaa ccctcggtgt tttttttctt tgctgttatt gttgtgttaa
    16441 ttataatttt ttccctctct ttaaagaaag atgaagtaaa agaaattgct gaaattatag
    16501 atgataagag atatggaata gtcaacacag gacagtgcaa ttatattctt gccgaaacac
    16561 aaaatgatgc ggtatgggca tctgtagcct taaataaaac cggatttacc aaatgcagat
    16621 atattctggt gtccaacaaa gaaataaata gaattcaaca atatatcaat caacgattcc
    16681 catatatcaa tttgtatgtg ttgaatttag tgagtgataa agcggaatta ctggtatttt
    16741 taagtaaaga aagaaatagt tcaaaagata ccgaacttga gaaattgaaa aatgctctga
    16801 ttgttgaatt tccgtatatc aaaaatatta aattcaacta tcttagcgat cataatgcaa
    16861 gggaggatgc taaaggtatt ttcacaaagg taaatgtcca gtataaagag atttgtggaa
    16921 ctaataaagt tacatattct gtcagagaag aactgacaga tgaaaagctt gagctcatta
    16981 atagactgat ttctgatcat aaaaatgtat atggagatca gtatattgag ttttctgtac
    17041 ttttgataga tgatgatttt aaaggtaaat catatcttaa cagcaaagac agttatgtaa
    17101 tgttgaatga taaacactgg ttttttttag ataaaaataa gtgaggataa aatgagtgtt
    17161 acagtaccgg ataaagattg gactctgagt tcattatctg aaacttttga tgatggaact
    17221 caaacattac aaggtgaact aacatcggca ctagatgcat tagctagaaa tccttcgaat
    17281 ccacagttgc tggctgaata ccaaagtaaa ttatctgaat atacattata taggaacgcg
    17341 caatctaata ctgtgaaagt gattaaggat gttgatgctg caattattca aaacttcaga
    17401 taatagggag cattcatgaa ttacatttat ccagtcaatc aggttgatat tatcaaagcc
    17461 agtgattttc aatctcaaga gatatcaagt ctggaagacg tcgtgtcggc taaatatagt
    17521 gatattaaga tggatacaga tattcaagta tcacaaataa tggagatggt aggcaatcca
    17581 gaatcattaa atccagaatc tttggccaag ttacagacga cgctctcaaa ttattcaata
    17641 ggagtatcat tagctggcac gttagcaaga aaaacagttt cggctgttga aactttatta
    17701 aagtcttaat ttatatgatt aggtataaag gttttatttt attcttgttg ctgatgttga
    17761 ttggatgtga gcaacgtgaa gagttaattt ctaatttatc tcaaagacag gcaaatgaaa
    17821 taatatctgt gctagaacgc cataatatta ctgctagaaa agttgatgga ggtaaacagg
    17881 ggatctcggt acaagtcgaa aaggggacat ttgcatcggc agttgatttg atgcgcatgt
    17941 acgatttgcc aaatccggag agagttgata tctcacaaat gtttcctaca gattcattag
    18001 tgtcttctcc aagagctgaa aaggcccgtt tatatagtgc tattgagcaa cggctggaac
    18061 agtctttagt ttctattggt ggtgttattt cggcaaaaat acatgttagc tatgatcttg
    18121 aagaaaaaaa tatatcttca aaaccgatgc atatatcagt aatcgctata tatgactcac
    18181 cgaaagagtc tgaactatta gttagtaata ttaagcgatt tttgaaaaac accttttctg
    18241 atgttaagta tgaaaatata tctgtcatat taactccgaa agaagaatat gtttatacaa
    18301 atgtacaacc tgttaaggaa attaaatcgg aatttttaac aaatgaagta atatatgtat
    18361 ttctcgggat ggctgtacta gttgtcattc ttttggtatg ggcattcaaa acagggtggt
    18421 tcaagagaaa caaaatatga taagaatgga tggaatttat aaaaaatatc tttcaataat
    18481 ttttgatcca gcgttctata taaatagaaa tcggttgaat ttgccttctg aactgttaga
    18541 aaatggcgta atcagaagtg agattaataa tctcataatt aataaatatg atctaaattg
    18601 cgatattgaa cctttaagcg gggtaaccgc tatgtttgtt gccaactgga atttacttcc
    18661 agctgttgct tattttatcg gtagtcaaga gtctcggtta attaatcata gtgagatggt
    18721 tattagttat tatgggggca aaatcagtaa gcaaggggag gccgctattc gaagtggttt
    18781 ttggcatctt attgcgtgga aggaaaatat atctgttggt atatatgaaa gaataaactt
    18841 attatttaat ccaattgctt tggagggaaa ttatacgcct gtagaaagaa atttgtctcg
    18901 attaaatgaa ggtatgcaat atgcaaaaag gcactttacc ggtatccaga catcatgcct
    18961 atgatggtgt tgttataaag agaattgaaa aggaattatg taaaaccata aaagatagag
    19021 acactgagag taagaagaaa gcaatttgtg ttataaagga tgctacgaaa aaagctgaat
    19081 cactgcgtat agatgctgta tgtgatggtt atcaaattgg tatacagact gcttttgagc
    19141 atattattga ctatatttgt gaatggaagt taaagcaaaa tgaaaacaga agaaatattg
    19201 aggactatat aactagtttg ctttcagaaa atttacatga tgagaggatc attaacactt
    19261 tattggagca gtggcttagt tcgttgcgta atacagtaac agaattaaaa gtggttttgc
    19321 ccaagtgtaa tttagcactg aggaaaaagt tagaacttga tctccataaa tatcgctcag
    19381 atgtcaagat tattttaaaa tattctgaag ggaataatta tatattctgt agtggtaatc
    19441 aagtagtgga gtttagtcct caggatgtaa tatcaggtgt taaaatagaa cttgcggaaa
    19501 aattaacaaa aaatgataaa aaatatttca aagagttagc acataagaaa ctgagacaaa
    19561 ttgcagaaga cttgttaaaa gagaatcctg ttaatgatta atcaaataaa tgcaagcaat
    19621 gctctgcagc aaagattaaa tagtgaagaa tttgttaatt taaatgagag attatcatct
    19681 tcgcaatcat ttgatgagga tataatctat gaaataatgc aatatttctc acagagtgaa
    19741 ttaaattcca tagataatga tgaactgcac aataagattg aacaattatt caattcacgt
    19801 tttccttatc ttacagctgc acaaaaaagt tcacttctta ataaactcat agatgcaaat
    19861 caatatgtcg atttgcatga gggattttat gcatcattgt ccatatataa caatattgat
    19921 ttctatatta agactacaac cttcgattca ttaattaatg tctttgaagc agggagagag
    19981 gcagatgatt cgacatggta gtaataagtt gaaaatattt attttaagta tattgctatt
    20041 aacactgagt gggtgtgctt taaagtcatc atctaattct gaaaaagaat ggcatattgt
    20101 tcctgtaagt aaggattatt tttctattcc aaatgattta ttatggtcgt ttaatacaac
    20161 caataaaagt ataaatgttt actctaaatg tattagtggt aaggcggttt atagttttaa
    20221 tgcaggtaaa ttcatgggca actttaatgt taaggaagta gatgggtgct tcatggatgc
    20281 acaaaagata gctatagata aactattttc tatgctgaaa gacggggttg ttttaaaagg
    20341 taataagata aatgatacca tccttataga gaaggatggg gaagttaaat taaaattaat
    20401 tcgagggata taattgtatt gtgagtaaat ataaaggtct aaatacaagt aatatgtttt
    20461 acatttactc tagtggacat gaaccagtta acgttgagct tgtaaaagat aaagaacgta
    20521 acataattga gctggctcca gcatggaagg gttttttttt gtccgaaatc aaaatataaa
    20581 attcagtgat aatgtgaact atcattatcg ctttaacatt aatagttgtg caaaatttct
    20641 tgctttttgg gactatttca gtggtgctct agtagagcat agccatgctg aaaaatgtat
    20701 tcatttctat catgagaatg atcttcggga tagttgtaat accgaatcga tgcttgataa
    20761 gttaatgtta agattcatct tttcatctga ccagaatgta agtaatgcac tggctatgat
    20821 acgaatgact gagtcatatc atttggttct ttatcttctg agaactattg agaaagaaaa
    20881 ggaggtaaga ataaagagtc tgacagagca ttatggtgtg tcggaggctt attttagatc
    20941 tttatgtaga aaagctttag gggcaaaagt caaagaacaa ctgaacactt ggcggttagt
    21001 aaatggttta ttagatgtat ttttgcacaa tcaaacaatc acttctgctg ccatgaataa
    21061 tgggtatgca tcaacatccc atttttcaaa tgagataaaa acacgactag gcttttctgc
    21121 aagagaatta tcgaatatta cttttttagt gaaaaaaata aatgaaaaaa tttaatatta
    21181 aatctttgac tctcttgatt gtattgttac cattgatagt taatgctaat aatattgact
    21241 ctcatttatt agaacaaaat gacatagcga aatatgttgc tcaaagtgat acggtaggat
    21301 ctttttttga acgtttttct gcgttattaa attatcctgt tgttgttagc aaacaagctg
    21361 caaaaaagag aatatctggg gagtttgatt tatctaatcc agaagaaatg cttgaaaaac
    21421 tgacattact tgtgggactc atatggtata aagatggaaa tgcattatac atatatgact
    21481 ctggagaatt aataagcaaa gttattttgc tggagaatat atcacttaat tatcttattc
    21541 agtatctgaa ggatgctaac ctttatgatc acagatatcc tataagagga aacattagtg
    21601 ataaaacatt ctatatatct ggtcctccgg cattggttga actggtagct aatacagcaa
    21661 ctttgcttga taagcaggtt tcttctattg ggacagataa agttaatttt ggggttataa
    21721 aattaaaaaa tacatttgtt agtgacagaa cttataatat gagaggggag gatattgtca
    21781 tcccaggggt ggctactgtt gtagaacgtt tattaaataa tggtaaggct ctgagtaaca
    21841 gacaagccaa aaatgatccg atgccaccct ttaatattac acagaaagta tctgaggata
    21901 gtaatgactt ttcatttagt tcagttacca atagttctat attagaggat gtatcactta
    21961 ttgcatatcc agaaaccaat tctatattag tcaaaggtaa tgatcagcaa atacagatta
    22021 ttcgcgatat tatcactcag ttagatgtag ccaaacgaca tatagaatta tcattatgga
    22081 taatcgatat tgataaatct gaattaaata accttggcgt taattggcaa ggaacggctt
    22141 catttggtga ttcgtttggt gcgtcattta atatgagctc atcagcatcg ataagcactt
    22201 tggacggcaa taagtttatt gcttcagtta tggcattaaa tcagaaaaag aaagcaaatg
    22261 tagtttcaag gccggtgatt ttgacacaag agaatattcc ggctatattt gataataaca
    22321 ggacttttta tgtgtcatta gttggtgagc gcaattcttc gttggagcat gttacgtatg
    22381 gaacattgat aaatgttata cctcgctttt catctcgggg acaaattgag atgtctttaa
    22441 cgatagagga tggaacagga aatagtcagt caaattacaa ttataataat gaaaatacat
    22501 ctgtccttcc agaagttgga aggaccaaaa tcagtacaat agcgagagtt ccacaaggca
    22561 aaagtttgtt gataggtggt tatacgcatg aaacgaactc taacgaaata gtatctattc
    22621 cttttctctc ctctattcct gtaatcggta atgtgttcaa gtataaaaca agtaatatca
    22681 gtaatattgt aagggttttt ctgattcaac cccgtgagat aaaggagtca agttattata
    22741 atactgcaga atataagagc ctcatatctg aaagagaaat acaaaagact acacaaataa
    22801 tcccatctga aactactttg ctggaagacg aaaaatcatt ggtttcatac ttaaattact
    22861 aactataaag taggtgatgt atgcttgatg ttaaaaatac aggagttttt agctctgcat
    22921 tcattgataa gttgaatgca atgacaaatt cagatgatgg agatgagact gctgatgcag
    22981 agcttgattc tggcttggct aatagcaagt atattgactc atctgatgag atggcttctg
    23041 ctctttcgtc atttataaac agaagagacc ttgagaaact gaaaggaaca aatagtgata
    23101 gtcaggaacg tattttagat ggggaagaag atgaaattaa tcacaagatt tttgatttaa
    23161 agagaacttt aaaagataac cttcctctag atcaggattt tatagacaga ctaaagagat
    23221 attttaaaga tccaagtgat caagtcttag cattaaggga acttttgaat gaaaaagatc
    23281 ttactgctga acaagtcgaa tcattaacta aaattattaa tgagataata tcaggtagtg
    23341 aaaaaagtgt taatgctgga ataaattcag ctatacaggc taaattattt ggcaacaaaa
    23401 tgaaacttga accacagctt ttgcgtgcat gttatcgtgg ttttatcatg gggaacatat
    23461 caacaacaga tcagtatata gaatggcttg gtaattttgg ttttaatcac agacatacaa
    23521 ttgtgaattt tgtagagcag tcactgattg tagacatgga ttctgagaaa ccgagctgta
    23581 atgcttatga gtttggtttt gtgttatcta aattaattgc aattaagatg attagaactt
    23641 cagatgtaat ttttatgaag aaactggaat cctcaagctt gctaaaagat ggcagtttaa
    23701 gtgcagagca gctattgcta actttattat atatttttca atatccaagt gaaagtgagc
    23761 aaattcttac ttctgttata gacgtatcac gagccagtca tgaggattct gtagtgtatc
    23821 aaacatatct atcttctgtt aatgaaagtc ctcatgatat atttaaaagt gaaagtgaaa
    23881 gagaaattgc gatcaatatt ctacgagagc ttgtcacaag tgcatacaag aaagagcttt
    23941 ctagataaca ggagatgaaa gtgatccagt cttttcttaa gcaagtaagt actaagcctg
    24001 aattaattat attagtgctt atggttatga tcattgctat gttgatcata ccattaccta
    24061 cataccttgt tgatttttta atagggctta atattgtact tgctattctc gtttttatgg
    24121 gatcatttta tattgaaaga atattgagtt tttctacatt cccttcggtt ttgttgataa
    24181 cgacattatt tcgtctcgct ttatcaataa gtactagtcg actaatttta gttgatgcgg
    24241 atgcgggtaa aattattact acatttggcc agtttgtcat tggtgatagt ctggctgtag
    24301 gttttgttat tttttcaata gtaactgttg tgcagttcat tgttataaca aaaggatctg
    24361 aaagggttgc ggaggtagct gctcgctttt ctcttgacgg tatgccgggg aaacaaatga
    24421 gcattgatgc ggatttaaag gctggaatta ttgatgccgc aggagctaaa gaaagacgca
    24481 gtattctgga acgtgagagt caattgtatg gttcatttga tggagcaatg aagttcatta
    24541 aaggtgatgc aattgctggc atcattatta tttttgtcaa tttaatagga ggtatttctg
    24601 ttggtatgag tcaacatgga atgtctctat ctggtgcatt atctacttat accatactaa
    24661 ctattggtga cggattggtc tctcagattc ctgctctgtt aatttctata agtgcaggat
    24721 ttatcgttac aagagttaat ggtgatagcg ataatatggg acgtaacata atgtcccaga
    24781 tatttgggaa tccttttgtt ctcattgtta catcagctct tgccttggcg atagggatgt
    24841 tgccaggttt tccgtttttt gtttttttcc tgatagcagt tactttgacg gctttattct
    24901 attataaaaa ggtcgtagaa aaagaaaaaa gtctgtctga gtctgattct agtggctata
    24961 ctggtacatt tgatattgat aatagccatg actcatcttt ggcaatgata gaaaatctgg
    25021 atgctattag ttcagaaacc gttcctttaa ttttattatt tgccgaaaat aagataagtg
    25081 caaatgatat ggaaggtctt attgaaagga taagaagtca gttctttatt gattatggtg
    25141 tcaggcttcc aactatttta tatagaacaa gcaatgagct taaggtcgat gatattgttt
    25201 tgttaataaa tgaggtgcgt gccgatagtt ttaatatata ctttaacaaa gtgtgtatta
    25261 cagatgaaaa tggagatata gatgctctag gtattcctgt tgtttcaact tcatataatg
    25321 aacgtgttat ttcttgggta gacgtttcat atacagaaaa tctaactaat attgatgcta
    25381 aaattaaaag tgctcaagat gaattttatc accagttgtc acaagcttta ttaaacaaca
    25441 taaatgagat ttttggtata caagaaacaa aaaatatgtt agatcagttt gaaaatcggt
    25501 atcctgatct attaaaggaa gtcttccgac atgtgactat acagagaatt tctgaggtat
    25561 tacaaagatt gcttggagaa aatatttctg ttcgcaattt aaaacttatt atggagtctt
    25621 tggcgctttg ggctcccaga gaaaaagatg tcataacatt agttgaacat gtccgtgcat
    25681 cactttctag gtatatttgt agtaaaatag ctgtttctgg tgagattaaa gttgtgatgc
    25741 tttccggata tattgaggat gcaataagaa aagggataag gcaaacctct ggtggctctt
    25801 tcttgaatat ggatatagag gtttcggatg aggtaatgga aactttagca catgctttga
    25861 gagaattgag aaatgcaaaa aaaaatttcg ttcttttggt atcagtagat atacgtaggt
    25921 ttgttaaaag acttatagat aacagattta agagtatact cgttatatcg tatgctgaga
    25981 ttgatgaagc atataccatt aatgtattaa agactattta gtgaggttta aatatgagta
    26041 acattaattt agttcaatta gttagagata gtcttttcac gattggttgt cctccatcaa
    26101 ttattacaga tttagacagc cattcagcga ttaccatttc tttggatagt atgcctgcta
    26161 ttaatatagc tcttgtcaat gagcaggtta tgttatgggc taattttgat gcaccaagtg
    26221 atgtaaaact tcagtcatct gcttataaca tattaaattt aatgttaatg aactttagtt
    26281 atagcattaa tgagctggta gagcttcatc gttctgatga gtacttacag ttaagagttg
    26341 ttattaaaga tgactacgtt cacgatggga ttgtttttgc agagattctg catgagtttt
    26401 atcagaggat ggaaatctta aatgaggtct tataatcaat gagctatata aaattgctca
    26461 ctcaattatc ttttcctaat agaatctcgg ggccaatctt ggaaacaagt cttagcgatg
    26521 tttcgattgg tgagatttgt aacattcagg ctggaattga aagtaatgaa attattgcaa
    26581 gagctcaggt tgtaggattt catgatgaaa aaacaatatt aagcttgatt ggaaattctc
    26641 gtggactttc acggcaaacg ttgattaagc ccactgccca gtttcttcat acgcaagtcg
    26701 gccgtggatt attgggagca gtagtcaatc ctttagggga ggttactgat aagtttgctg
    26761 ttacggataa cagtgaaatt ctttatcgac ctgtagataa tgctcctccg ctatatagtg
    26821 aaagggctgc aattgagaag ccttttttaa caggtgttaa ggttattgat tctttactca
    26881 cgtgtggtga aggacagcga atggggattt ttgcgtcagc tggttgtggc aaaacttttc
    26941 tcatgaatat gctcattgaa catagtggtg ctgatatata tgttattggg ttaattggtg
    27001 agcgaggtcg agaggttaca gaaacggttg attatttgaa aaactctgag aaaaaaagca
    27061 ggtgtgtttt agtatatgca acttcggatt actcttcggt tgatcgttgt aatgctgcat
    27121 atatagccac tgctatagcc gaatttttta ggactgaagg acataaagta gcgcttttta
    27181 ttgattcatt aacaaggtat gccagagcat tacgtgatgt ggccttagcc gctggagaat
    27241 cacctgccag aagaggctat ccggtttcgg tttttgatag cttacccaga cttcttgaaa
    27301 ggccaggaaa gttaaaggca ggtggctcta ttactgcatt ttacactgtt cttttggagg
    27361 atgatgattt tgctgatcca ttagctgaag aggtaagatc cattttagat ggacatatat
    27421 atttgagcag aaatctagcc caaaaaggac aatttcctgc aattgattcc ttaaaaagta
    27481 taagcagggt atttacacag gttgttgatg aaaaacatcg tattatggcc gctgcatttc
    27541 gggagctact ttctgaaata gaagagctaa ggacaattat tgactttggt gaatacaaac
    27601 cgggggagaa tgcctctcag gataaaatct acaacaaaat atctgttgtt gagagttttc
    27661 tgaagcaaga ttatcgactc ggttttactt atgagcagac aatggagctt attggtgaaa
    27721 caattagata aggttttaaa aatcaaagat aaatatcaac ggtctgttaa attaattgaa
    27781 gcacacatat taacactaaa aaaaaaactc tttgtatcga gatgtggagg cattagataa
    27841 aaggattata tacttcctgc aactggagaa tgacttggaa cctgtaggcg ctcagagtgt
    27901 tagtcagctt ttcaatacaa gacgtaagat cgctatagta aaaaagcata ttatccaata
    27961 tcagtctgaa cgaattcttc taaagggaag aattgaagaa attcaaaaag atattgatga
    28021 ggcaaatgct tctaaaagaa aactgcttca taaagagagt aaaatatgta aacggattgg
    28081 cttgattaaa agaaataact ttgccaaaca gttgatactt gatgagttat cacaagagga
    28141 tatgaagtat ggcattagat aatataaacc taaattttag tagtgacaaa cagatagaaa
    28201 aatgtgagaa actatcttca atagataata ttgatagtct cgttttgaag aagaagagga
    28261 aggttgaaat tcctgagtac tctttaattg catctaacta ttttactatt gataagcact
    28321 ttgaacataa gcatgataaa ggagaaattt atagtggcat taaaaatgcg ttcgaactta
    28381 gaaacgaacg agcgacatat tctgatattc cagaatcaat ggccattaaa gaaaatattt
    28441 tgataccaga tcaagatatc aaagcaaggg aaaaaataaa tatcggcgat atgaggggga
    28501 tcttttcata taataagagt ggaaatgcag acaagaactt cgaaagaagt catacttctt
    28561 ctgtaaaccc tgataatctg ctagaatctg ataatagaaa tggtcaaatt ggtttaaaaa
    28621 atcatagctt gtctattgat aagaatattg ctgacatcat ttctttacta aatggaagtg
    28681 ttgctaaatc atttgagctg cctgtaatga ataaaaatac tgcagacata accccatcca
    28741 tgtcattgca agaaaaatca atagttgaaa atgataaaaa tgtttttcaa aaaaatagtg
    28801 aaatgactta ccactttaaa cagtgggggg ctggacattc tgttagtatt tcagtggagt
    28861 ctggttcttt tgttctaaaa ccgtcagatc aatttgtagg aaataaactt gacttaattt
    28921 tgaaacaaga tgctgagggt aattacagat ttgatagcag tcaacataat aaggggaata
    28981 aaaataatag tacaggatat aatgaacaga gtgaagaaga atgctaagaa ttaaacattt
    29041 tgacgctaac gaaaaactac agattttata tgcaaagcaa ctctgcgagc gtttttcgat
    29101 tcagacattc aaaaataaat ttacaggcag tgaaagttta gtcactctta cttccgtgtg
    29161 tggggattgg gtaattcgta ttgatacatt atcttttttg aaaaaaaaat acgaggtatt
    29221 ttcaggattt tctacacaag aatctttact gcatttatca aaatgtgtct ttatagagtc
    29281 gtcatctgta ttttcgattc cagaactgtc taataagatt actttccgga tcacgaatga
    29341 aatccagtat gcaactactg ggagtcattt atgctgtttt tcctcttctt taggtattat
    29401 ttattttgac aagatgccgg tattacgtaa tcaagtttct cttgacttat tgcatcatct
    29461 tttagagttt tgcttaggtt catctaatgt aaggctggct actttaaaaa gaattcgtac
    29521 tggtgatata atcatagttc agaaacttta taatttatta ttgtgtaatc aagttattat
    29581 tggggattat attgtgaatg ataataatga ggcaaaaatt aatctgtcag aaagtaatgg
    29641 tgagtcagat cacacagaag tttctttggc attattcaat tatgatgata tcaatgtaaa
    29701 agtggacttt atccttttag aaaaaaagat gacaatcaat gaactaaaaa tgtatgtaga
    29761 aaacgaatta ttcaagtttc ccgatgacat agttaaacat gtaaatatta aagtaaatgg
    29821 ttctttggtt gggcatgggg aacttgtttc tattgaggac ggttatggta tcgagattag
    29881 ttcttggatg gtaaaggagt aatctcatgc tgagtgatat gtccctcatc gctacacttt
    29941 ctttttttac gctattacca tttttagttg ctgctggtac ttgttatata aagttttcta
    30001 ttgtttttgt aatggtacga aatgcacttg gtttgcagca ggttccatca aatatgactc
    30061 tcaatggtat tgcattgatt atggctttgt tcgtgatgaa acccattatt gaagctggtt
    30121 atgaaaatta tctaaatggc ccgcaaaaat ttgatacaat atcagatatt gtccgttttt
    30181 ctgattctgg cttgattgaa tacaagcaat acttgaaaaa gcatacagat cttgagttgg
    30241 cacgtttttt ccaaaggtct gaagaagaaa atgctgattt aaagagtgca gagaataatg
    30301 attattcatt gttttccctc ttgcctgcat atgcgctaag tgaaattaaa gatgcgttca
    30361 aaataggttt ttatttatat ttgccattta ttgttgttga tcttgttatt tcaagcattt
    30421 tacttgcact tggtatgatg atgatgagtc caatcacaat atcagtacca ataaaacttg
    30481 tattatttgt tgcgcttgat gggtggggga tcctgtctaa ggccttgatt gaacaatata
    30541 tcaatgttcc tgcttagatg atggaggtaa tgtgtctgat atagtttata tgggtaataa
    30601 ggctctttat ttaatcctta tcttttcctt atggccagta ggtatagcta cggttattgg
    30661 attaactatt ggtttattac agacagtgac tcaacttcaa gagcagacac ttccttttgg
    30721 tataaagctt ataggtgtct caatatcttt gctacttctt tctggatggt atggtgaggt
    30781 tttattgtct ttttgtcatg aaataatgtt tttaattaag agtggggttt gatggacatt
    30841 tcaagctggt tcgaaagtat tcatgtgttt ttaatactcc tgaacggcgt tttttttaga
    30901 ttggctccat tatttttctt tcttccattt ttaaataacg gtataatttc tccatctatt
    30961 agaatacctg tgatttttct tgttgcatca ggattaatta cttctggtaa ggtagacata
    31021 ggttcttctg tttttgaaca tgtttatttc cttatgttca aggaaataat tgttggcctc
    31081 cttctctctt tttgcttgtc tcttcccttt tggatatttc atgctgttgg tagcattatt
    31141 gacaaccagc gtggggcaac gcttagtagt tcaattgatc ctgccaatgg tgttgatacg
    31201 tctgagttgg caaaattttt caatcttttt tctgcagttg tatttctata cagtggtgga
    31261 atggtcttta ttttagaatc catacaattg tcttataata tatgcccgtt attttctcaa
    31321 tgttctttcc gtgtctcaaa tatcttaaca tttctgactt tattggcaag tcaggctgtt
    31381 attttagcca gtcctgttat gatagtattg ttactatcag aagtattact tggtgtatta
    31441 tcgagatttg ctccgcagat gaatgctttt tccgtatcat taactattaa aagtttactt
    31501 gcaatattta ttgttttcat ctgttcttct actatttact tttctaaagt tcaatttttc
    31561 ctcggtgaac ataaattttt cacaaatcta tttgttagat aaaatattat ggcaaataaa
    31621 acagaaaagc cgacacctaa aaaactaaag gatgccgcaa aaaagggaca gtcatttaaa
    31681 tttaaggatt taacgactgt tgttattatt ctggtaggga catttacgat aatatcattc
    31741 ttttccttaa gtgatgtaat gctcttatac agatatgtaa taattaatga cttcgaaatt
    31801 aatgagggta aatacttttt tgcagtggtt attgtctttt ttaagataat tggcttccca
    31861 ctttttttct gtgttctttc ggctgtgttg ccaacattgg ttcaaacaaa gtttgttctt
    31921 gcgactaaag ctatcaagat tgatttttca gtattaaacc ctgttaaagg gttaaaaaaa
    31981 atatttagta taaagacaat aaaagaattt ttcaaaagca ttctgcttct tattattcta
    32041 gcattaacaa cctatttctt ttggattaat gaccgaaaaa taattttttc tcaggtgttt
    32101 tctagtgttg atggcttata tcttatttgg ggggggctgt ttaaggatat aatattattt
    32161 ttcttggcat tttctatttt tgttattatt cttgactttg tgattgagtt cattttatac
    32221 atgaaagata tgatgatgga taaacaggag ataaaaagag aatatataga gcaagaggga
    32281 cactttgaga caaagtcgag aaggcgtgag ttgcatatcg agattctttc agagcagact
    32341 aaatctgata tacgtaattc aaaattagtg gtaatgaacc cgactcatat tgcaattggt
    32401 atttatttta atccagaaat agcgcctgca ccttttattt ctctcattga aactaaccag
    32461 tgtgccttgg ctgtcagaaa atatgcaaat gaagttggta taccaactgt gcgtgatgtg
    32521 aaattagcta gaaaactata taaaacacat acaaaatata gttttgttga ttttgaacac
    32581 ttggatgaag tcctacgtct tattgtttgg cttgagcagg ttgaaaacac tcattaataa
    32641 gtaaaggaga tgtgttatat gggagttaat ttctgtaata aaataggtat tgatcagtct
    32701 gaatttgaaa tagaatcttc catcattaac tccattgcta atgaggtatt gaacccaata
    32761 tctttcctta gcaacaagga tataataaat gttttactca gaaagatttc atctgaatgt
    32821 gacctggtta gaaaagacat ttatcgttgt gctctggagt tggtcgttga aaaaacacct
    32881 gatgatttat aatcattcat aataactctt ttgttgatat aaatattttt gttgaagata
    32941 tttatgtagt cacaggatca attgtagaaa attgttatgt ttttgttagg aactgcacta
    33001 aataatatat gataagacag caaaaacgac tgaccataat ccttctttta ttaggagttg
    33061 ataagagaga ctattcatcc tgtaatgtta aaactctgtt atatagtatt cgcgattatg
    33121 caaagtctgt aaatgatcat gagatactaa ccgagagtaa tcgtttatta tctcattgca
    33181 tttcagatag taacggagct ttctttaaaa gtagtaaata cgttcccctt aagtacttac
    33241 gtaaaaggag aatagcacga aagataccaa atgattagca ctttgctagt aagcttgctg
    33301 gtaaactata ttgaccgttg ggtttgtttt gagactgtaa tttaaattgt gtaattgcct
    33361 gtttttgata tgtttactcc aacaacggag acaggtaaat tatggacgaa aagaagctta
    33421 aagcccttgc ggctgaactg gctaaaggcc tcaaaactga ggccgacctc aatcagtttt
    33481 cccgtatgct gacgaaatat cccggctctt aaaacgatag tggctcaggc tttcattttt
    33541 cagcgttccc cagaag
//
LOCUS       DAJVTL010000035        33417 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.035, whole genome shotgun sequence.
ACCESSION   DAJVTL010000035 DAJVTL010000000
VERSION     DAJVTL010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33417
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.035"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..441
                     /locus_tag="OQQ26_001575"
     CDS             <1..441
                     /locus_tag="OQQ26_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbM family protein"
                     /protein_id="HCS1857067.1"
                     /translation="TEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKND
                     PLSRAVLGEHSLEDGIDGFLDLTWNQELAATIDRLESLDRSELRKQFSIKRLNEMEIY
                     PGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG"
     gene            complement(508..1965)
                     /gene="nuoN"
                     /locus_tag="OQQ26_001576"
     CDS             complement(508..1965)
                     /gene="nuoN"
                     /locus_tag="OQQ26_001576"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HCS1857068.1"
                     /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK
                     DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYL
                     FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY
                     SAGGIVVLISALLVLVLGVWPQPLISIVRLAMPLM"
     gene            complement(1972..3501)
                     /gene="nuoM"
                     /locus_tag="OQQ26_001577"
     CDS             complement(1972..3501)
                     /gene="nuoM"
                     /locus_tag="OQQ26_001577"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HCS1857069.1"
                     /translation="MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSL
                     QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
                     LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYSATGVWTFNYEELLNTPMSSG
                     VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
                     PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
                     QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
                     VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKEKS
                     QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
                     P"
     gene            complement(3665..5506)
                     /gene="nuoL"
                     /locus_tag="OQQ26_001578"
     CDS             complement(3665..5506)
                     /gene="nuoL"
                     /locus_tag="OQQ26_001578"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HCS1857070.1"
                     /translation="MNMLVLTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
                     TAFIGVDFFANGEQAYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
                     PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
                     LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLV
                     TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
                     VTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAIVGILLA
                     AWLWLGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
                     SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            complement(5503..5805)
                     /gene="nuoK"
                     /locus_tag="OQQ26_001579"
     CDS             complement(5503..5805)
                     /gene="nuoK"
                     /locus_tag="OQQ26_001579"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HCS1857071.1"
                     /translation="MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(5802..6356)
                     /gene="nuoJ"
                     /locus_tag="OQQ26_001580"
     CDS             complement(5802..6356)
                     /gene="nuoJ"
                     /locus_tag="OQQ26_001580"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HCS1857072.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
                     MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRKDDSAKRKTEEHA"
     gene            complement(6368..6910)
                     /gene="nuoI"
                     /locus_tag="OQQ26_001581"
     CDS             complement(6368..6910)
                     /gene="nuoI"
                     /locus_tag="OQQ26_001581"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HCS1857073.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(6925..7902)
                     /gene="nuoH"
                     /locus_tag="OQQ26_001582"
     CDS             complement(6925..7902)
                     /gene="nuoH"
                     /locus_tag="OQQ26_001582"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HCS1857074.1"
                     /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
                     VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ"
     gene            complement(7899..10625)
                     /gene="nuoG"
                     /locus_tag="OQQ26_001583"
     CDS             complement(7899..10625)
                     /gene="nuoG"
                     /locus_tag="OQQ26_001583"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HCS1857075.1"
                     /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCVACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
                     ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLE
                     VIQAAANVAKALKGRGADVGITMVARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPSYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
                     LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
                     NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
                     VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
     gene            complement(10678..12015)
                     /gene="nuoF"
                     /locus_tag="OQQ26_001584"
     CDS             complement(10678..12015)
                     /gene="nuoF"
                     /locus_tag="OQQ26_001584"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HCS1857076.1"
                     /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGALKALTG
                     LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(12012..12512)
                     /gene="nuoE"
                     /locus_tag="OQQ26_001585"
     CDS             complement(12012..12512)
                     /gene="nuoE"
                     /locus_tag="OQQ26_001585"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HCS1857077.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
                     QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
                     LLERYK"
     gene            complement(12515..14317)
                     /gene="nuoC"
                     /locus_tag="OQQ26_001586"
     CDS             complement(12515..14317)
                     /gene="nuoC"
                     /locus_tag="OQQ26_001586"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HCS1857078.1"
                     /translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
                     ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
                     PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
                     NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
                     SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
                     DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSY
                     AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(14411..15073)
                     /gene="nuoB"
                     /locus_tag="OQQ26_001587"
     CDS             complement(14411..15073)
                     /gene="nuoB"
                     /locus_tag="OQQ26_001587"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HCS1857079.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(15089..15532)
                     /gene="nuoA"
                     /locus_tag="OQQ26_001588"
     CDS             complement(15089..15532)
                     /gene="nuoA"
                     /locus_tag="OQQ26_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HCS1857080.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(16162..17100)
                     /gene="lrhA"
                     /locus_tag="OQQ26_001589"
     CDS             complement(16162..17100)
                     /gene="lrhA"
                     /locus_tag="OQQ26_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HCS1857081.1"
                     /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
                     FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV
                     ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
                     AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
     gene            18015..19232
                     /gene="alaA"
                     /locus_tag="OQQ26_001590"
     CDS             18015..19232
                     /gene="alaA"
                     /locus_tag="OQQ26_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase AlaA"
                     /protein_id="HCS1857082.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
                     EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
                     SKFARFLSGYHQL"
     gene            19316..19915
                     /gene="yfbR"
                     /locus_tag="OQQ26_001591"
     CDS             19316..19915
                     /gene="yfbR"
                     /locus_tag="OQQ26_001591"
                     /EC_number="3.1.3.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
                     /protein_id="HCS1857083.1"
                     /translation="MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHAL
                     AAIKNRKFGGNVNAEHIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ
                     KLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAK
                     TRLEATLEARRSQEMDYFMEVFVPSFHLSLDEISQDSPL"
     gene            complement(19974..21806)
                     /locus_tag="OQQ26_001592"
     CDS             complement(19974..21806)
                     /locus_tag="OQQ26_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HCS1857084.1"
                     /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
                     VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
                     AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGYHGFSFFSVTPIGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
                     DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
                     GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
                     SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
                     AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM
                     GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
                     LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
                     SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
     gene            complement(21893..22543)
                     /gene="hxpA"
                     /locus_tag="OQQ26_001593"
                     /pseudo
     CDS             complement(21893..22543)
                     /gene="hxpA"
                     /locus_tag="OQQ26_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311204.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpA"
     gene            complement(22554..23048)
                     /locus_tag="OQQ26_001594"
     CDS             complement(22554..23048)
                     /locus_tag="OQQ26_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HCS1857085.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
                     RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR
                     YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQ
                     IINA"
     gene            complement(23131..23586)
                     /locus_tag="OQQ26_001595"
     CDS             complement(23131..23586)
                     /locus_tag="OQQ26_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HCS1857086.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
                     RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
                     LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            23924..25126
                     /gene="ackA"
                     /locus_tag="OQQ26_001596"
     CDS             23924..25126
                     /gene="ackA"
                     /locus_tag="OQQ26_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HCS1857087.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
                     KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLTARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            25201..27345
                     /gene="pta"
                     /locus_tag="OQQ26_001597"
     CDS             25201..27345
                     /gene="pta"
                     /locus_tag="OQQ26_001597"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HCS1857088.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     TGGDAPDQTTTIVRANSSATTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
                     EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQMKERIELTRNSFG
                     GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
                     GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
                     LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
                     NTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
                     RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
                     ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
                     LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
                     AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
                     LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
                     MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
     gene            27535..29055
                     /gene="yfcC"
                     /locus_tag="OQQ26_001598"
     CDS             27535..29055
                     /gene="yfcC"
                     /locus_tag="OQQ26_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HCS1857089.1"
                     /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTS
                     GSKYGTAVSIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWVIATLIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD
                     VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRL
                     NGMTINTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI
                     SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVSVNRQVTVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH"
     gene            complement(29088..29630)
                     /gene="yfcD"
                     /locus_tag="OQQ26_001599"
     CDS             complement(29088..29630)
                     /gene="yfcD"
                     /locus_tag="OQQ26_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HCS1857090.1"
                     /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
                     HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
                     HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA
                     LALWMKRNAKNEAVETETAE"
     gene            complement(29688..30239)
                     /gene="yfcE"
                     /locus_tag="OQQ26_001600"
     CDS             complement(29688..30239)
                     /gene="yfcE"
                     /locus_tag="OQQ26_001600"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HCS1857091.1"
                     /translation="MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN
                     ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFL
                     THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGML
                     DNDVLSVIALNDQSIIAQVAINP"
     gene            complement(30295..30939)
                     /gene="yfcF"
                     /locus_tag="OQQ26_001601"
                     /pseudo
     CDS             complement(30295..30939)
                     /gene="yfcF"
                     /locus_tag="OQQ26_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708183.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
     gene            31075..31722
                     /gene="yfcG"
                     /locus_tag="OQQ26_001602"
     CDS             31075..31722
                     /gene="yfcG"
                     /locus_tag="OQQ26_001602"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
                     /protein_id="HCS1857092.1"
                     /translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL
                     RISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLF
                     WQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS
                     IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS"
     gene            31779..32141
                     /gene="folX"
                     /locus_tag="OQQ26_001603"
     CDS             31779..32141
                     /gene="folX"
                     /locus_tag="OQQ26_001603"
                     /EC_number="5.1.99.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate 2'-epimerase"
                     /protein_id="HCS1857093.1"
                     /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
                     ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
                     LHALRYADSVSMTLSWQR"
     gene            32162..33055
                     /locus_tag="OQQ26_001604"
     CDS             32162..33055
                     /locus_tag="OQQ26_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HCS1857094.1"
                     /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
                     VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS
                     DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
                     LRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNDLRG
                     PFNMVSPYPVRNEQFAHALGQALHRPAILRVPATAIRLLMGESSILVLGGQRALPKRL
                     EEAGFAFRWYDLEEALADVVR"
     gene            complement(33103..>33417)
                     /locus_tag="OQQ26_001605"
     CDS             complement(33103..>33417)
                     /locus_tag="OQQ26_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857095.1"
                     /translation="GIKRSYLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEITERA
                     PQEKEKLMTIADRLREEGAMQGKHEEALRIAQEMLEKGFDHDVILTLTRLSPDDLIAQ
                     SH"
BASE COUNT         8295 a         9143 c         8451 g         7528 t
ORIGIN      
        1 actgaaaaac ctttgatgga taatatacat gacacgcttt caggattacg ccgactggat
       61 attgataaac gctgggattt tttacacttt gggttgacag gcacctctgc ttttgatccc
      121 gcgaagaatg atccgctgag tcgtgctgtg cttggtgagc atagcctcga agatggcata
      181 gatggcttcc ttgatttgac ctggaatcag gagttagccg cgacaatcga ccgactggaa
      241 tcactggatc gaagtgaact gcgtaaacag ttttccatta agcgactcaa tgaaatggag
      301 atttatccgg gagtgacctt ttcagaagag ttagaggggc aactctttgc gtccattatg
      361 cttgatatgg agaagctgat tagcgcgtat cgacgtatgc tgcgacaagg gaatcatgcg
      421 ctgacggtta ttgttgggtg atggtgtcag ggcaccaaaa aaaaccgccg aacatgtcgg
      481 cggctttctg acttacaaac taacagatta catcagcggc attgctaacc gcacaatgct
      541 aatcagcggt tgcggccata cacccagcac cagtaccagc agtgcagaga tcagcaccac
      601 gataccgcct gcgctgtact gccagtttga cggtgcatcg cgacccggtt gttccggggc
      661 gtgcaggtac aggctcaccg ccacgcgcag gtagtagtaa aggccgattg ccgaaccgac
      721 aaccacggcg cccaccagcc accacaagtg tgcctggaca ccgaccgcca gcacgtagaa
      781 cttaccaata aagcccagcg tcatcggaat accggccaaa gacagcatca tcaccgtcat
      841 caccgccgcg aggatcgggc gatgccagaa cagaccgcgg taagagaaca gggaatcagc
      901 atccgggcca cggtacgggc tggacatcag gctgaccacg ccgaacgcgc cgaggctgct
      961 gaacagataa ccggccaggt aaactcctac cgcttccatc gacatctcgc ccgtttgcag
     1021 cgcaatcagc gccaccagca gatagccgag gtgagagata gatgagtaac cgagcagacg
     1081 tttgatattg gtctggctca gcgccatcag gttaccgaag atgatagagg caaaggcgat
     1141 aatcgccagc actacccgaa tcgcttcgct gtcacccacc ggtgcgtaga ggaacagacg
     1201 catcaccaca ccgaagatag cgattttgct cgccgtcgcc aggaaagtgg aaaccggcgc
     1261 aggcgcgccc tggtatacgt ctggcgtcca caggtggaac ggcaccagag agagtttgaa
     1321 gccgaggcca acaatcatca ggccgaaacc tgccagcaac agcggctcgt tgagcatacc
     1381 gtcgccgagg tttttaccca gcgcgacaaa cgacaggtcg ccagactgcg catacaccag
     1441 cgccataccg aacagcagga aagaagacgc tgcggcagaa aggatggtgt atttgatact
     1501 ggcttccagc gaacgtttct ggcggaaagc gtaaccgacc aggccaaaca gcggcaaaga
     1561 gatcagttca ataccgagga acagagacgc cagatggttt gcattcgcca gcaggatccc
     1621 gcccagcgcg gcaattaaca ccaacaggta gaactcatcc ttgttgtcgt tatagccttc
     1681 aagccacggg taggcgaaag tacaggtggc gaggctcgcc aacaatacca gcccggtgta
     1741 aagcatggcg aaaccatcaa cgcgcatcag cggcgtaacg tccatagcgc ccgcctggcc
     1801 aacaaaccag agcgaaacca gcgccgcgtt aagcccaata accgagagcg tagcgttgag
     1861 gaaatgattg cgtcgccacg caatggagag catcacaacc accaccgtca agccgacgat
     1921 cagcaacggt agcagtgcga tcaggttttg tggagttatt gtcatggcga tttacggcct
     1981 tgtagtagta acggaattaa caaaccactg ctggatattg ccaatcgcgg agtgcgaggt
     2041 atccagaatc ggctgcggat agaagcccag cagtaccagc agcaccacca gcaacaggat
     2101 cataaacagc tcacgcagcg acatccctgg cagttcctgg ctggcaatct ggcttttctc
     2161 tttaccgaag taagcgcgat gcaacatcgc cagcgaataa acagatgcaa agaccagccc
     2221 aaaggtagaa ataacggtaa tcaccgggac aacctggaag cttccgaaca gaatcataaa
     2281 ttcgccgacg aagttaccgg tgccaggcat cccaagcgtt gccaccgcaa agaacagcga
     2341 cagtgctggc agccatttca tcttgctcca cagaccgccc atcatgcgca tgtcgcgggt
     2401 atggatacgt tcataaagct gaccgcagag aataaacaga cccgccgctg acaagccgtg
     2461 cgcaatcatc tggattaccg cgccctggta ggccaactgg ctgccggtgt agatagcaat
     2521 cagcacgaag cccatgtggg aaaccgaggt gtaggcgatc agacgtttga tatcggtctg
     2581 ggcgaaggcc atccacgcac cgtagaagat gccgataaca cccagccaca tagcgattgg
     2641 cgcgaactct gccgacgcat ttgggaacag cggcagggag aaacgcagca aaccgtaagc
     2701 ggcagttttc agcaagatcc ccgcgaggtc aacggaaccg gcggtcggag cctgggagtg
     2761 cgcatccggc agccagccat gcagcggaac caccggcatt ttgactgcga aggcgatgaa
     2821 gaagcccagc atcaacagat attccacacc actggacatt ggcgtattca gcagctcttc
     2881 atagttgaag gtccagacgc cggtcgcact gtagtgaaca aaaaccagcg ccaagatggc
     2941 gatcaacatc accagaccac tcgcctgtgt gtaaatgaag aacttggttg ccgccgtgat
     3001 acgcgtttta ccgtcagagg ctttatgccc ccacagtgcg atcaggaagt acatcggcac
     3061 cagcatcatt tcccagaaga agaagaatag gaacatgtcg atggcaagga acacgccgat
     3121 aacgccgccc aggatccaca tcaggttgag gtggaagaag ccctgatatt tttcgatctc
     3181 tttccacgaa cagagtaccg ccagcacacc gagcagaccg gtcagcacga ccatcagcag
     3241 cgacagcccg tcaatggcga gatggataga gataccaaaa cgcgggatcc acggcatgtc
     3301 gaattcagac tgccactgcg gaattccggc ggattgcgtc agtgaataac cgccctgcaa
     3361 ccacagttgc agcgacagcg ccagcgtcaa tcccatggtg atcagcgcga tccagcgcgg
     3421 caccttgacg ccaaagcgtt cggtctgcca gcacaggaag ccgccaatga agggaattaa
     3481 tattagccag ggtagtaaca tggcgatctt tattccttgt aaaagtcccg tcaggaccgg
     3541 attttcaacg aattctcacg acagaaaatt ctcttcggac tgggggtagt gtcggatgca
     3601 ccgcgaaggc ggcttatccg acctacgttc ttatatgccc aggggcaatc ccacaatcct
     3661 taactcaacg cagtaccatc aacagtgcca gcaccacgac cgcaccgatg ctcatggatg
     3721 ccacatacca gcgcaggtag ccgttctcac ttaacagtag gcctttacct gcaaagcggg
     3781 aaaggacagc cgggatgttc atcattgagt tcagcggatc gcgtttcagc aaccaggcaa
     3841 tacccaggaa cggcttgacg aacactttgt cgtacagcca gtcaaagccc caggcgttgt
     3901 accaccaggt gcccagcaga cggcccggcg cactgttggc gatggaggtc accagagtac
     3961 gtttaccaag ccacagccag gcagccagca gaatgccgac aatcgcgacc acgccagagg
     4021 taatttccag ggtcaacatg ctgccgtgcg ccagctccgt cgtttgcgga agcacgccct
     4081 gcagcggcgg tacaatcagt gcgccaacga aggtggaaag gatcagcagc acaatcagcg
     4141 gcaggctgtg agttacccct ttcacggcgt gagcgtgaat ttgttctttt ccgtggaaga
     4201 cgatgaaaat catacggaag gtgtagagcg aggtcataaa cgcaccgacc agacctgcca
     4261 ccatcagatt gatatgacca ttcgccatcg cacccgcgag gatctcatcc ttactgaaga
     4321 agcccgcagt gactagcggc agtgccgaca gtgctgcgcc gcccaccagg aagcagagat
     4381 aaaccagcgg aatagattta cgcagaccgc ccatcttgaa gatgttctgt tcgtgatggc
     4441 aggccagaat gacggaaccg gatgccagga acagcagcgc tttaaagaac gcgtgggtca
     4501 tcaagtgaaa aatcgccgca tcccatgcct gcacgccaag cgcgaggaac atgtagccaa
     4561 tctggctcat ggtagagtaa gcgagaacac gtttgatgtc ggtctgtacc agcgcggcaa
     4621 aaccggccag cagcagcgta accgccccaa caatgcccac cagatgcaga acttccggcg
     4681 tcatcaggaa caggccgtgg gtacgggcga tcaggtagac acccgcggtt accatcgttg
     4741 cggcgtggat cagcgcggag acaggcgtcg ggcccgccat cgcgtcggca agccatgtct
     4801 gcaacggcaa ctgcgcagat ttaccgaccg caccgcccag cagcatcagc gtcgcccaca
     4861 tcagcatgtt attgccgtca gcaaagtgcg ctggtgccag ttccaccatt tcgcggaagt
     4921 tcagggtgcc cagttcgttg taaagaatga acagcgcgaa agcgaggaac acgtcaccca
     4981 cacgggtcac gacgaacgct ttcattgccg ctgcgccatt cttcggatcg gtgtaataga
     5041 acccgatcag cagataggag cacaggccca cgccttccca gccgaggtac atcagcagca
     5101 ggttatcggc gagaaccaga actaccatgc tggcgatgaa caggttggtg taggcgaaga
     5161 agcgagagta gccctcttca ccgcgcatgt accaggaggc gtacatgtga ataaggaaac
     5221 ccacaccagt gaccaccgag agcatggtca gcgacaggcc gtccagcacc aggttaaaac
     5281 cgatgttaaa gtcgcctacc gacatccacg tccacagcgg ctggctgtat gcctgctcgc
     5341 cgttagcgaa gaaatcaacg ccgataaagg cggttaccag cgccgccagg cccacagagc
     5401 caacgccgac gatcgccgaa acgttttcag accagcgccc acgggagaac gccagcagga
     5461 cgaagccaat caatggcaaa ataatggtta agacaagcat gttcatccgc gcatctcact
     5521 tactgaatcg atgttcaggt tctggcgacg acggtgaagt tgcagcagca gcgcaaggcc
     5581 gatactcgct tctgccgccg cgaggctgat ggcgagaatg tacatcacct gaccgtcggt
     5641 ctgaccccag tagcttccgg cgaccacaaa ggccagcgcg gaggcgttaa tcatgatttc
     5701 cagaccaatc agcataaaca gcagattgcg acggataacc agaccggtta agccaagaac
     5761 gaataagatt gccgcgagga tcagtccatg ttgtaagggg atcatgcgtg ctcctccgtt
     5821 tttcttttcg cgctgtcgtc tttacgattg ctcagcactt cacccgcacg ctcttcacga
     5881 ccgacgtgga aggccacaac cagacccgcg agcagcagca tagaagccag ttccaccgcc
     5941 agtacgtaag gcccgaacag cgtaataccc acagctttag cactgattgg cgtaccgtcg
     6001 ataccctgat cgttaacacc gaggatggcg taaacaatca ccaccagcat gatggccgac
     6061 aaaattgccg ggccaatcca cacctgcggt ttcagccact ggcgttcctg ttcgatttct
     6121 gaaccgccca ggttgagcat catcaccacg aacacgaaca gcaccataat ggcacccgcg
     6181 tagacgataa tttccagcgc accggcgaag taagcgccta gtgagaagaa caccccggaa
     6241 atcgccagca gcgaaataat caggtacagc agtgcgtgta ccggattggt atgggtgatc
     6301 actcgcaagg tcgcaagtat ggctatcagg ccacagatat aaaaagcgaa ctccattgcc
     6361 cctctcctta cggtaacagg ctcttgacgt cgataggctt ggcttcgttc tctgcttcgc
     6421 ccttatcttt gccgtcgatt gccatacctg ccatccggta gaagttatat tccgggtatt
     6481 tgcccggacc ggagatcagc agatcctctt tctcgtaaac cagatcctgg cgcttgtatt
     6541 cccccatttc gaaatccggg gttaactgaa tcgccgtggt cggacaggct tcttcgcaca
     6601 gaccacagaa aatgcagcga gagaagttga tgcggaaaaa ttccggatac cagcgaccgt
     6661 ctttggtttc tgctttttgc agcgagatac agccgaccgg gcaggctacc gcacagaggt
     6721 tacaggctac gcaacgctct tcgccgtccg ggtcgcgggt cagaacgata cgaccacgat
     6781 aacggggcgg cagatagacc ggctcttccg ggtacattcg cgtttcgcgt ttggcgaacg
     6841 cgtgcaggcc gatcatccag atactacgaa cctgggtgcc gaaacctact aacaattctt
     6901 ttaaggtcat ggtcttattg ccccttattg cgcctgccag agaatgacag ccgccgttac
     6961 cagcaagttg atcagcgtca gcggcaggca gattttccag ccgaaggaca ttacctggtc
     7021 ataacgcgga cgcggtaacg acgcacgaat caaaatgaac atcatcataa agaacgcggt
     7081 tttcagcgcg aaccagatga atggcggtaa caacgggcct tgccagccac cgaagaacag
     7141 cgtcaccatc aatgcagaga tggtcacaat cccgatgtac tcacccacga agaacagacc
     7201 gaacttcata ccggaatatt caatgtggta accatccgcc agttcctgct cggcttccgg
     7261 ctggtcaaac gggtgacggt gacataccgc cacgcccgcg atggcaaagg taataaaacc
     7321 aaagaattgc gggatgacgt tccacacatg cgcctggctg ttgacgatgt cggtcatgtt
     7381 gaatgaaccg gcctgcgcca ccacgcccat cagggaaagc ccgaggaaca cttcgtagct
     7441 cagggtctgc gcagaagcac gcatcgcacc cagcagcgag tatttgttgt tacttgacca
     7501 gcccgcaaac agcaccgcgt aaaccgccag acctgccatc atcaggaaga acaaaatccc
     7561 gatgttcagg tcggcaacca cccaacccgg actgactggc acaattgcaa aggccagcag
     7621 cagcgaggta aaggcaatca tcggtgccaa ggtaaagatg acgcgatccg agaatttcgg
     7681 gatccagtct tctttaaaga acattttgat catgtccgca accagctgga gcgaaccgcc
     7741 ccagccaaca cggttaggtc cgtaacggtt ctggaacaga cccagcaggc gacgttcgcc
     7801 aaagctcatg aatgccccgc aggtgacaac caccagcagg atcaccaccg ctttgaggat
     7861 ggtcagcagg atctcaatca gttccggtga tatccaactc attgttgtgc ctccttgaga
     7921 tcctcaagat gcgcgccagc cagcaccgga gcaatgccgg acatacccat cggcaagccc
     7981 acctgccctg ccgtcagccc ttcggcgatt tcaaccggca gcgtgaccgt gttgccatcg
     8041 taactaaagg agacgcgtgt ccccgcattc acgcccaact tcgcggcatc cgctgggttg
     8101 agtttgatgt acggctgcgg catacggctc tggaagaccg gagcacgctg tgacaattca
     8161 tcgctgccaa acaggtggta gtacggcgcg atacgccatt tcccgtcctg cggctggaag
     8221 cgtgccggta cgctggtgaa gtaatccaga ccgttttcgc tggtttcaaa cagacgcacg
     8281 cccggatcgc caaagcgcag tttgccgccc acttcgtcct ggaatttgtt ccacgcctgc
     8341 ggggagttcc agcccggcgc ccaggcaaac ggcacttgcg aacggtgcgc ggtcggctgg
     8401 ttgttacctt ccatcgagaa ggtgaacatg gtgtcaatat cctgcggctg acgcggctca
     8461 tgaacgctga tattggcgcg catggcggta cgaccgctgt aacggtgcgg ttcacgggcc
     8521 agtttctgcc cacgaatacg gaatgtcgca tccggcgcag catctttgat acccgccagt
     8581 tccgggattt tcgccacaac ggcgtcaatc acgtggtcga gctgcgtcca gtccacttca
     8641 cggctcagca gggtgctgtg cagcgagtgt aaccagcgcc agctttccag catgacagtt
     8701 ttgctgtcgt aataggacgg gtcgtaaacc tggaagaaac gttgggcgcg gccttcatta
     8761 ttaattaccg taccgtcgct ttcagcaaag ctggcggcgg aaagcaccag atgggcgttt
     8821 tccatgatcg ctgtgcgttg atggtcaacc accatcacca gcggcgcttt agccagcgca
     8881 gcattcacgc gggtagcgga agcgtgacga tgcagatcgt tttccagcac aaccaccgcg
     8941 tcggcgcgtc cggtttccag ttcggttaac gcttcttcaa gcgatccacc gcccataatg
     9001 cccagcccca tgctgttgac ggaacgggca accatggtga taccgacgtc agcgccgcga
     9061 cctttcaggg ctttcgcgac gttagccgcc gcctgaatca cctctaagct accggcgttc
     9121 gtcccggaga taatcaacgg tttcttcgca ccagccagtg cctgcacgat gacgtcgatt
     9181 ttgctttgca gttcaggttc aataccgtca accgctggcg cggagttatc cagcgcatgg
     9241 gcgatggcaa aacctaaacg cgcctgatct tcaaccggtg cgcggtaagt ccacgccgcg
     9301 atatcatcca gacgggtgtc atcaacgttg gtaacaaaca gcggatgctt cgcacgttga
     9361 ccgatgttga ggattgccgc aatctgccag tcagccactt tctgtgctgc cgccatttcg
     9421 cgcgctttac ctttcaccgc ctgacgcact gccagcgcga cgcgcgcgcc ggtctgggta
     9481 acgtcttcgc ccagcaccag taccgcatcg taagattcga tttcgcgcag agccggcgta
     9541 taaatgccgc cttcacgcag cactttcagc gccagttgca gacgttcctg ctcaccgtga
     9601 gcgataccgg tgtagaagtt ttcttcgccc accagttcac gcagcgcaaa gttgctttcc
     9661 acgctggcac gcggagaacc aataccgatc actttcttcg actgacgcag aatatctgct
     9721 gcgccctgca ttgcctgttc ggcgttgagg gtaatgaaat catcgccacg acgctgtact
     9781 ggttgacgcg gacgatcttt caggttgacg taaccgtaac cgaaacgacc acggtcgcag
     9841 aggaagtagt ggtttaccgt accgttgtaa cggttttcga tacgacgcag ttcgccgtaa
     9901 cgttcaccgg ggctgatgtt acagccgatg gaacattgct ggcagatgct cggcgcaaac
     9961 tgcatatccc atttacggtt gtaacgctcg gagtgcgttt tgtcggtaaa tacgccggtc
    10021 gggcaaattt cgaccaagtt accggaaaat tcgctttcca gcgtgccgtc ttccgggcga
    10081 ccgaagtaga cgttgtcgtg cgcaccgtaa acgcccagat ctgtaccgtc agcgtaatct
    10141 ttgtagtaac gcacgcagcg gtagcaggcg acgcagcggt tcatttcgtg agagatgaat
    10201 ggccccaaat cctgattacg gtgggtacgt ttggtgaaac ggtagcgacg gaagctgtgt
    10261 ccggtcatca cggtcatatc ctgaagatgg cagttaccgc cttcttcaca taccggacag
    10321 tcgtgcgggt ggttggtcat taaccactcg accacacttt cacggaactg tttcgcttct
    10381 tcgtcgtcaa tggaaataaa ggtgccatcg gaagccggtg tcatacagga catcaccagg
    10441 cgaccacgcg tgtcttccgc gttttggtat tgcttcaccg cacactggcg gcaagcaccg
    10501 acgcttccca gcgccggatg ccagcaaaag taaggaatat caaggcccag agacagacaa
    10561 gcttccagca ggttgtccgc tccattgacc tcgtattctt tgccgtctac atgaattgta
    10621 gccattagca tgcttccagt tttctcagtc agagactgag cgttaatcga aattcggtta
    10681 ccagcgctct ttcagcaggt tcggctgaat cccattaatc aaatgggtat tgctgaacgg
    10741 ctgtttgatt cccgcctcaa attcttcgcg gaaatatttg atggcgctct gtaacggctc
    10801 cactgcacca ggtgcgtggg cacagaaagt tttacccggg cctaagaatc gacacagttg
    10861 ctcaagtgtt tcgatatcgc ccggctgacc ttcgccacgc tccagcgcac gcagaatttt
    10921 cacgctccac ggcagaccgt cacggcacgg cgtacaccag ccgcaggact cacgggcgaa
    10981 aaactcttcc aggttacgca ccagcgacac catgttgatc tcatggtcaa ccgccatcgc
    11041 cagcgccgta cccagacggc tgcccgcttt accgatactt tcgaattcca tcggcaggtc
    11101 aaggtgcgct tcggtcagga agtcagtccc cgcgccgcct ggctgccagg ctttgaattt
    11161 cagaccgtca cgcataccac cggcgtaatc ttcgaggatc tcgcgtgcgg tggtgccgaa
    11221 cggcagttcc cacaggcccg gatttttcac ccgaccggag aagcccatca gcttggtgcc
    11281 agcatcttta cttttcgaga tgttctgata ccactccacg ccgttagcga ggatcgccgg
    11341 aacgttacac agggtttcga cgttgttgac acaggtcggt ttgccccata cgccggaggt
    11401 tgccgggaag gggggtttcg agcgcgggtt agcgcgacgc ccttccaggg agttgattaa
    11461 cgctgtttct tccccgcaga tgtagcgccc tgccccggta tggacgaaca gttcgaagtc
    11521 aaaacctgtt cccataatgt ttttgccaag caagcccgct tcagtggctt cggcaatggc
    11581 gcggcgcaga tttactgccg cttcgatata ttcgccacgc aggaagatgt agccacggta
    11641 agctttcagc gcaaacgcgg agatgagcat accttccacc agcaggtgcg gcagttgctc
    11701 catcaacagg cggtctttat aggtgcccgg ctccatttca tcggcgttac acagcaggta
    11761 acggatgttc atggattcgt ctttcggcat caggctccac ttcaggccag tcgaaaagcc
    11821 cgcgccgccg cgccctttca gaccagcgtc ttttacctga ttaacgattt cgtccggaga
    11881 cagcccagtc agcgccttaa gcgcgccttc gtaaccgttt ttgctgcgat attcgtccag
    11941 ccacacaggc tgtttgtcat cgcgcagacg ccaggtcagt ggatgcgttt cgggagtacg
    12001 gataatgttt ttcatttata ccgctccagc agttcaggga tcgcttccgg ggtcagatgc
    12061 gcgtgagtgt cctcatcgat catcatgttt ggccctttat cacagttccc caggcagcaa
    12121 gttggcagca gcgtaaagcg accgtcaaat gtcgtttgcc ctggtttgat gtttagcttt
    12181 ttctcgagcg ccgcctgaat accctggtaa ccgttgatat gacagaccac gctgtcgcaa
    12241 taacggatca catggcgacc aaccggctgg cggaagatct ggctgtagaa cgttgccaca
    12301 ccttcaacgt cgctcgccgg aatacccagc acatcggcga tcgcgtggat cgcgccgtcc
    12361 ggcacccagc cacgctgctt ctgaacgatt ttcagcgctt caatggacgc cgcacgcggg
    12421 tcttcgtagt ggtgcatctc gtgctcaatc gcttcacgct ctgccgcact cagctcaaaa
    12481 gcctcggttt gtggttgttg attctcgtgc ataattagcg gtccacatct gacataacaa
    12541 aatcgatact gcccagataa acaatcaggt cagacaccag gctgccgcgg atcgccgccg
    12601 gaatttgctg caaatgcgca taactcggcg tgcggatacg agtgcgataa ctcatggtgc
    12661 taccgtcgct ggtcaggtag taactgttga tccccttggt cgcctcaatc atctggaaag
    12721 attcattggc aggcatcacc ggcccccacg acacttgcag gaagtgggtg atcagggttt
    12781 cgatatgttg cagcgtgcgc tctttcggcg gcggcgtggt cagcgggtga tccgctttga
    12841 acgggccttc cggcatgttg ttgaggcact gctcaagaat gcgcagactc tggcgcagct
    12901 cttccacttt cagcattacg cgggtgtagc agtcagaaac accaccacca accgggattt
    12961 caaagtcgaa gttttcatag ccagaataag gacgcgcctt acgcacgtcg aagtcgatcc
    13021 cggtagcacg caggcccgcg ccagtggtgc cccactccag cgcctctttc gcgccatagg
    13081 cggcaacgcc ctgggaacga cctttcagaa tggtgttttg cagcgccgct ttctcgtaag
    13141 acgccagacg tttcggcatc cagtcgagga actcacgcag caggcgatcc cagccgcgcg
    13201 gcaggtcgtg cgctacgccg ccaatacgga accacgccgg gtgcatacgg aaacccgtga
    13261 ttgcttctac cagatcgtaa attttctgac gatcggtaaa ggcgaagaac actggcgtca
    13321 ttgcgccgac gtcctgaata aaggtcgaga tatacagcag gtggctgttg atgcggaaca
    13381 gttcggagag cattacgcga atgacgttaa cgcgatccgg cacggtgatc ccggccagtt
    13441 tctctaccgc cagcacgtaa ggcatttcgt taacgcagcc gccgaggtat tcgatacggt
    13501 ctgtatacgg aatgtagctg tgccaggact ggcgttcgcc cattttctcc gcaccacggt
    13561 ggtggtagcc gatgtctggt acgcagtcga caatctcttc gccatcgagc tgcaaaacga
    13621 tacggaaagc cccgtgcgcc gacgggtggt tcggaccgag gttgaggaac atgaagtcct
    13681 cgttttcggt gccgcgcttc atcccccact cttccggttt gaaggtcagg gcttccatct
    13741 ccagatcctg tttggctttg gtcagctcaa acggcgagaa ttcggtagcg cgcgccgggt
    13801 aatctttacg cagcgggtga cctttccagg tttgcggcat catgatgcgg cgcaggttcg
    13861 ggtgaccgtc gaaagtaatg ccaaacagat cccaggtttc acgctcatac cagttagcgt
    13921 tcgggaacag tttggtgaag gtcggtacgt gcaggtcgtt ttctgccagc gccaccttca
    13981 gcatgatgtc gcggttacga tcgatagaaa tcagatggta gaaaacggaa aaatccgcgg
    14041 caggtaaccc ttcgcggtgt gtgcgcagac gttcgtccat gccgtgtaag tcaaacagca
    14101 tgacgtaagg tttcggcagt ttctttaaga aatcgccaac ttccagtaat tgttcacgct
    14161 tgatccacac aacgggaacc ccggtgcgag tcgcctgaac agtaaaggca tccggcccaa
    14221 aacggttgcg cagttcgcca atcaccggat catcaagatg atcgcgggtc tgccaggcgg
    14281 gttcttgcgc ggttaagtcg gtcatattgt tcaccattgc aaatggtccg tggtgactgt
    14341 cggcgcagta agcttcgcga aatagattta ggaataagcg aagaaaaatc cctttgccga
    14401 caggcgcaaa ttaaatctcg tcaggtgtac gcaggttggt tacggcaatg cgttcaccgc
    14461 gcttgcgttc gcgctctgat tgcatattgg cgcgataaac gccctgatcg ccaaccaccc
    14521 aggagagcgg acgacgttct ttgccgatag attcctgcaa cagcatcagt gcctgcatgt
    14581 acgcttcagg acgcggcggg cagcccggga tatacacatc aaccgggatg aatttatcga
    14641 cgccctgcac aacggaataa atatcgtaca taccaccaga gttggcacag gcacccattg
    14701 agataaccca ttttggttcc agcatctggt catacagacg ctgaataacc ggtgccattt
    14761 tggtaaagca ggttcctgca accaccatca ggtcagcctg acgcggcgaa gcacgcaata
    14821 cttctgcgcc aaaacgcgcc acgtcatgca ccgcggtaaa cgaagtcacc atctcaacgt
    14881 aacagcagga aagaccgaag ttatacggcc aaattgagtt tttacgaccc cagttaacca
    14941 tgtcattgag cttgcccata aacacgtttt tgttaacttc ttgctccaga gggtcggtta
    15001 cgatctcctg cttttgcagg gggtaacggt cgttctcacc gttgggatct atgcgggtga
    15061 gcgtataatc catcttaatg cctcgcggtt agcgttgacg attagcgata ctgttcgttt
    15121 ccgggttcat acgctcgcgg cgtgaacgcg cgggcgtcca gtccagcgcg ccaatacgca
    15181 ccagataaac cagacctgcc agtaacacaa aaataaaaat tgcagcttcc acaaagccta
    15241 cccagccgct ttcgcggata gaggttgacc atgcgaacag atacagcgct tcaacgtcga
    15301 agataacgaa gaacatggcc accagataaa acttggcgga caggcgtaag cgggcggagc
    15361 cgaccgagtc gataccggat tcaaacggca cgtttttcga cctcgcgcgt gcgcgaccgc
    15421 ctaaaaacca accgcctacc agcatcaggc aacacaggcc aatggcaacg ataagaaaga
    15481 tagcgaatgc ccagtgatga gcgatgactt cagtggatgt tgacatactc attgcttact
    15541 catcaaaagt agcgccagat tcactgctct tcacggcaga tggacgccac atcgattcat
    15601 ggggaggaat aaaaaaacct tacaatcact gtagaaattc ttttatacag ctaattgatg
    15661 tggtctttta ctcctttcta taaccttttg tcaactttaa caaaagtttc ttcacattag
    15721 tttacataat atcaacacca ttagcattta atgctctttc accccagatc cttgacgact
    15781 ccaggataat tagatgttgt tgaatcgtgt ccgttgtgaa gcaatggaaa aaatacgggt
    15841 ctattttgac aggaatttgt gtcgattcct ccccccaaaa gagagtattt tcttgatctg
    15901 tgacacgctt ttgtcattcc ataacaaaaa cacagcaaca aatttacgta ttttttaaca
    15961 tcattgtagc aggtgatttt tttcaggcga ttatttgtgc gttcgggacg tgaatctctg
    16021 gtgattgaaa aatgaacagt tttgtacgtt ctgcactatg cgaggaagga tttttactaa
    16081 aaaaaagccg ctggggttta aaacaccccc agcggctcgt tttttacact attgtctcag
    16141 gaattatcta tcgtccgtcg attactcgat atccctttca atcaacaatg aatcatcccc
    16201 ttccggagca gacattgggc tgtattgcca cggattatgg tagctctcca tcgcctgata
    16261 gatcacctgg gccagctcat tattactgga cggatcatag cacagcaaat attcggtatc
    16321 aggtagcggc ggtaagccat ctactccact cagcacacgc aggtccgggc tcatcatctc
    16381 aaccggcctt gccgtcacgc caagaccggc tttcactgcc gcacgaacgg ccggaagcgt
    16441 cgaggcgaca taagccagtc gccatggaat atctgcttta ttaagcgtcg ccagcaccat
    16501 atcgcgaaac gggctaggat catccagcaa tacaagaggg atcggctcgc ctttttgcaa
    16561 tacgtattcc gctgcgcagt accagtgtgt tggcgaggta cgcaggttca atgccttaaa
    16621 cgctgaagga cgatgggtgg ttaccatcaa atccacttcc tgggattcca gcatttctgc
    16681 catataggca ttacgtttaa cgcggacatc cagcgctaat ttcggataaa ccgaactcac
    16741 gcgatttaac aggaaaggta agatcgtatc ggcagattca tctgaagcac cgatagttaa
    16801 cacaccctga agattactga acattaatga tgagcaggcc tcatcattaa aacgcaggat
    16861 tttcctggcg taaccaagaa gttgaatgcc atgttcagtt aacagtttgt tgcgaccgtg
    16921 acgagcgaac agttctttcc caacgagttg ttccagacgc tgcatttgct gacttacggc
    16981 ggactgagta cgacacacag cggcagctgc ggcagcaaaa gtgttcagat cggcaacagc
    17041 aacaaatgtt ctcagcagat cgaggtcgag gttaattatc ggacgatttg cacttatcat
    17101 atattatcac ttactggcgg ctcatactga gctggttaat gctgtgcaca cacaaacaag
    17161 caattccatt tgtaatgtgc ctccctggca gtttcatccg gaacccggac gaaagtaaaa
    17221 atgcatatga gttgcactaa aaaagcgact cacattgttc cgttataatg cctgaagtag
    17281 atcacagaat atatcttcag ggatcgcata tctattaagt tactcactct tttctattta
    17341 tgacatgcgc gtgtttgtat aaatgtaaat gtgagtcctt gttccactct cgtgcagcat
    17401 cgctggtcat acgcgaacac gtacaaacag caatggtgag gcggcatcaa gagcagggat
    17461 ccgtcattta tgcgagcatt ttaccccaaa aaccttttat ttataagggt cattgcgaat
    17521 tatctgatgc aaagttatgt taggcaaagt aatcttctat tattaataag tacatcaaaa
    17581 cctttttgaa tattaaataa taattaatta gcatcatcct cattcattaa ttccgcttaa
    17641 caatagtttc acaccttgcc cccattacga cacctcggaa atcatcacgc tgttaaactc
    17701 tccgtaatgc ggaaatatca tcatcgcgtt tcattagtga attcttaaat gaggcatttt
    17761 cacacaatta tcttacagat aaaaaaacca gacttacaat taagaatcag aacaattcac
    17821 tatatcacat tgcatgtaaa gcatatacac ctcattattt tgtcattatt aagttattaa
    17881 cagcacaatc gagccttccc ctctggcaaa atcttattct gcagaccttc aaaacaccgt
    17941 cctaggggag tacattgttc taagctgact tccacggcag ggagtggcga taacagcaaa
    18001 aaaggtcaag attcatgtcc cccattgaaa aatccagcaa attagagaat gtctgttatg
    18061 acatccgtgg tccggtgctg aaagaagcaa aacgcctgga agaagaaggt aacaaggtac
    18121 tgaaactgaa catcggcaac ccagccccgt tcggttttga cgcgccagat gaaatcctcg
    18181 ttgacgtgat acgcaacctg cctaccgctc aagggtattg cgattccaaa ggtctttact
    18241 ccgcgcgtaa agccatcatg cagcactacc aggctcgtgg catgcgtgat gttaccgtgg
    18301 aagatattta catcggcaat ggtgtatcgg agcttatcgt tcaggcaatg caggcattgc
    18361 tgaacagcgg ggacgaaatg ttggttcctg caccagatta cccactatgg accgcggcgg
    18421 tttcgctttc cagcggtaaa gcggtgcatt atctttgcga tgaatcctct gactggttcc
    18481 cggacctcga tgatattcgc gctaaaatta cgcctcgtac gcgtgggatc gttattatca
    18541 acccaaataa cccaaccggc gcggtatatt ccaaagagct tttaatggag attgtggaga
    18601 ttgcacgtca gcataatctc attatcttcg ccgatgaaat ttatgacaaa attctttacg
    18661 acgacgctga gcatcactca attgcgccgc tggcacctga cctgctgacc attaccttta
    18721 acggactgtc gaaaacgtac cgcgttgcag gcttccgtca ggggtggatg gtgttgaacg
    18781 ggccgaaaaa acacgccaaa ggctacatcg aaggtctgga aatgctggct tcaatgcgcc
    18841 tgtgtgctaa cgttcctgcg caacacgcca ttcagaccgc gctgggtggt tatcagagca
    18901 tcagtgaatt tattacccct ggcggtcgtc tttatgagca gcgtaaccgc gcgtgggaac
    18961 tgatcaacga tattccgggc gtttcctgcg tgaaacctcg tggtgcgctg tatatgttcc
    19021 cgaaaatcga cgccaaacgc tttaacattc acgacgatca gaaaatggtg ctggatttcc
    19081 tgttgcagga aaaagttctg ttggtgcaag ggacggcatt caactggccg tggccggatc
    19141 acttccgcat tgtcacgcta ccgcgtgtcg atgatatcga gctgtctttg agcaagttcg
    19201 cgcgtttcct ttctggttat catcagttgt aatcttaatt tcactgccgg agattgcatc
    19261 cggcagtgtt atcccgccac aatgacctga tgatgtcatc atacgtaagg tcactatgaa
    19321 acagagccat ttttttgccc atctctcccg cctgaaactc attaaccgct ggccgctcat
    19381 gcgcaacgtg cggacggaaa atgtgtccga acacagtttg caggtagcga tggtcgccca
    19441 tgcgctggca gctatcaaaa atcggaaatt tggcggtaat gtcaacgccg aacatatcgc
    19501 tttactggcg atgtaccacg atgcctcaga agtgctcacc ggcgatctcc ctactccggt
    19561 gaaatacttc aattcgcaaa tcgctcagga gtacaaggct attgaaaaaa tcgctcagca
    19621 aaaactggtc gatatggttc cggaagagct gcgggatatc tttgcgccgt taattgacga
    19681 gcatgcatat agcgatgaag aaaaatcgct ggtgaaacag gcagatgcac tgtgtgcata
    19741 tctgaaatgt ctggaagaac tcgcggccgg aaataatgaa ttcttgctgg caaaaacgcg
    19801 actggaagcg acgcttgaag cgcgtcgcag ccaggagatg gactacttca tggaagtatt
    19861 tgttcccagc ttccatcttt cgctcgatga gattagccag gattcaccgc tgtaagcagc
    19921 cggagtctgc gtcgcatcag gcaataagcg ccggatgcga catcaggctc ttgtcaaaac
    19981 ggaaacagca tcgggatcat caccacacaa accgccatca cgataatggt gaacggtacc
    20041 cccaacttca caaagtcact gaagctgtaa tttcccggac ctaaaaccag tgtgttaaca
    20101 ggtgaagaaa ccggtgtcat aaaggcggcg gatgctgcca tcgccacgac catcgcgaat
    20161 ggataaggcg acacacccat cgttttggca gcagccagcg caatcggagc catcaacacc
    20221 gccgtcgcgg tattagagat aaacagccca ataaccgccg acaagacaaa caaacaaccc
    20281 agcatcatat gtggcccata accgccgcca atgtccatca gccctttcac cgccagcgcg
    20341 acacctcccg ttttctgtaa tgccacagca aacggcatca tcccaacgat caaaataatg
    20401 ctcggccagt gaatggattt ataggcgctt tcggcatcga tacagcggaa tttccccatc
    20461 agcaagcagg ctatgatagc ggcaacagga ttaggaattt catcggtcag cattaacgcc
    20521 accatcaaca ccagacagaa aatggcatgg ggtgcctgac tgtgtgcggg cgatgcttca
    20581 ctcacttctt ctggtaagtt cagcgccaca aagtcacgcc cctgtttggc cagcataccg
    20641 atcagtttcc agttaccaac aaccaggatg atatcgccca gcagcagagg ctcatccgcc
    20701 agcgaacctt ccagcgccac gccattgcgc tttagcccca ccacattcag tccgtagcgg
    20761 gtacgaaaac caatttcgcg caccgattta ccaataagtt ctgactcagg aattaatgaa
    20821 atctctgcca tgcccacatc aagggcctgg tcagaaaaat actcgccgcg cagtaccatc
    20881 ggctccagca attgctcact acaaaattgc cggagatcga catcagccgc agacatatca
    20941 ataagcaaaa cgtcacgcgc gcgaaattca gaaaccccat taacgttcac gataacgcga
    21001 cgaaaacgcc gccagcgttc aacaccgatg acgttagcgc cataacgctc acgtaatttg
    21061 agatcatcca gccgttgacc aatcattggc gatccggggc gaatagccag acgtcgcgca
    21121 cgcccggtca gtcgatattc acggataaga tcgcgaaagg ttcgacgcgt ccagccttcg
    21181 cgctgcgggg tctgggtatc ccctttcagc atgaaacgca tcactaacat atacaaaata
    21241 cccagcacca gcacgaccag gccaataggt gttacgctaa agaaactaaa accatgatag
    21301 ccttcacgca gcaattcact gttgactact aggttcggcg gcgtcgccac cagcgtcatc
    21361 atgccgctaa tcagcccggc aaaacttaac ggcatcatca gacgtgacgg cgaagtttgc
    21421 atacgcatgg caacgcttaa caccacggga ataaagatag cgacaacgcc agttgaactc
    21481 ataaacgcgc caagccccgc gacggtcagc atcaacaaaa ccaacatttt gatttcactg
    21541 ttgcccgcaa ctttgaccag ccatgttccc attacggtgg caacaccggt acggaccaaa
    21601 ccatcgccaa taataaacaa ggcggcaatc aggacgacgt taggatcaga aaagccggaa
    21661 aatacttctg ggactgtcag cgttccgctt aatgcaaacg cgacaataac aaacaaagcg
    21721 accgcatcca tacgcactct gcccgtcgca aacaagacga tggcaacggc cagtaatgaa
    21781 agaacccaaa tcaattcacc gttcacaact tatccttgtt aattgagggg gatgacttga
    21841 ttctgccata aaaaagcccc gacgagacgg ggctaaatca tgatcaggtg tttcactgaa
    21901 taataacatc gccatttggc tgtttgatca cagtaatttg ctccagactg tggaggacca
    21961 aatcgacctc attcaggcgc ggggtatctg ccggagcgtt aaccgcaatg acatggcaac
    22021 ccgccgccag gccagaaagc acgccagcgg gagcatcttc caccaccaca cactcctgcg
    22081 gcgcaagccc cagcagctac gcgcctaaca gatacgcatc aggttctggt tttccgcgct
    22141 tcactcgctc agcggtcaca aatacctctg gcgcgggaag ccccgctatt ttatggcgcg
    22201 ctcgcgctac cggcatggag ccagaagtca caatggccca cggaatacct gctttattca
    22261 aatgattgag taaggcgatt gcccccggaa gcgcggtaat accttcggtt tccgtggcct
    22321 cgatttgctc cagacgcgta aactcggcgg caatatcagc ctcggatttg cccgccataa
    22381 aatggcgcag agaggtgatc gcctgtttac cgtgaatgaa agccagcacc tcttccggcg
    22441 ctaacccatg acgtctggcc cagttgctcc acgcccgttc taccgcaggc agggaatcca
    22501 ccagcgttcc atcaaaatca aacagaaaac ctttgcaccg cacgcgggcc tcctcaggca
    22561 ttgataattt gattaatttc gttggcgctc aaatggtact gacgcgggca ggcatgccac
    22621 acattaagca tgcgctgata tttttcccac attggcgtct gggcgttaaa accgtgagtt
    22681 ccggcgtcaa aatgggtata gcgcccttcc acattaacca taaagcggac ataaccgagg
    22741 taacgtgctt cagtggcggc gtcaaagccg aggaaggtga cacgacgttc atcgatggat
    22801 tgctggtcct gcaaattaga ccaggaaaca tgcaacgcat gatacatctc cataatgtcg
    22861 atgatagtgc ggcaggtttc ttctttcagc tcgccaaact cgcgatccag ttcacgcatc
    22921 tgtaatccat aaccacgctc aatgattgtt tgcaggcgac ggtaacgttc agcatttgcc
    22981 ggatcgagca tagtcatcat cttgtactga ttagacaaaa taagacgttg cgcgttggtc
    23041 atttccattg ttgactcctg tatcactcta ttacggtgaa aaaaaagaag gctgagtatg
    23101 ccttctttta tatgcgtaat caggggtcaa ttacaaatca tcaaggaaag ttttatccag
    23161 ttgtttgaag gcgcgcttaa gcgtgtcagc taatgcctgg taatcaggct tgccttcaac
    23221 gggtgccaac acctgtccag actcctgcaa tttaccgcga acttcataaa accagttaag
    23281 gattgcaggg ggtaatggcg ttacagaacg cttgcccagc caccacaatc cctgcatggg
    23341 taaacttaag gcgaacagtg cagtggcaac tgccggccca agctgaccgc ccagggcaat
    23401 ctgccagcag agagtaaata cggcgatcgg cggcataaaa cggatcgcat aacgcgtcat
    23461 cttgataacg cgattttcga caaagaccgg ggcaaggcgt ttttccagtg gccacgtctt
    23521 tgagtaatgc tgtccgcggc gaaacaagct aaaaaaatta acagaacgat tatccggcgt
    23581 tgacatgctt cacctcaact tcacatataa agattcaaaa atttgtgcaa attcacaact
    23641 cagcgggaca acgttcaaaa cattttgtct tccataccca ctatcaggta tcctttagca
    23701 gcctgaaggc ctaagtagta catattcatt gagtcgtcaa attcatatac attatgccat
    23761 tggctgaaaa ttacgcaaaa tggcatagac tcaagatatt tcttccatca tgcaaaaaaa
    23821 atttgcagtg catgatgtta atcataaatg tcggtgtcat catgcgctac gctctatggc
    23881 tccctgacgt ttttttagcc acgtatcaat tataggtact tccatgtcga gtaagttagt
    23941 actggttctg aactgcggta gttcttcact gaaatttgcc atcatcgatg cagtaaatgg
    24001 tgaagagtac ctttctggtt tagccgaatg tttccacctg cccgaagcac gtatcaaatg
    24061 gaaaatggac ggcaataaac aggaagcggc tttaggtgca ggcgccgctc acagcgaagc
    24121 gctcaacttt atcgttaata ctattctggc acaaaaacca gaactgtctg cgcagctgac
    24181 tgctatcggt caccgtatcg tacacggcgg cgaaaagtat accagctccg tagtgatcga
    24241 tgagtctgtt attcagggta tcaaagatgc agcttctttt gcaccgctgc acaacccggc
    24301 tcacctgatc ggtatcgaag aagctctgaa atctttccca cagctgaaag acaaaaacgt
    24361 tgctgtattt gacaccgcgt tccaccagac tatgccggaa gagtcttacc tctacgccct
    24421 gccgtacaac ctgtacaaag agcacggcat ccgtcgttac ggcgcgcacg gcaccagcca
    24481 cttctatgta acccaggaag cggcaaaaat gctgaacaaa ccggtagaag aactgaacat
    24541 catcacctgc cacctgggca acggtggttc cgtttctgct atccgcaacg gtaaatgcgt
    24601 tgacacctct atgggcctga ccccgctgga aggtctggtc atgggtaccc gttctggtga
    24661 tatcgatccg gcgatcatct tccacctgca cgacaccctg ggcatgagcg ttgacgcaat
    24721 caacaaactg ctgaccaaag agtctggcct gcttggtctg accgaagtga ccagcgactg
    24781 ccgctatgtt gaagacaact acgcgacgaa agaagacgcg aagcgcgcaa tggacgttta
    24841 ctgccaccgc ctggcgaaat acatcggtgc ctacactgcg ctgatggatg gtcgtctgga
    24901 cgctgttgta ttcactggtg gtatcggtga aaatgccgcg atggttcgtg aactgtctct
    24961 gggcaaactg ggcgtgctgg gctttgaagt tgatcatgaa cgcaacctca ctgcacgttt
    25021 cggcaaatct ggtttcatca acaaagaagg tacccgtcct gcggtggtta tcccaaccaa
    25081 cgaagaactg gttatcgcgc aagacgcgag ccgcctgact gcctgatttc acaccgccag
    25141 ctcagctggc ggtgctgttt tgtaacccgc caaatcggcg gtaacgaaag aggataaacc
    25201 gtgtcccgta ttattatgct gatccctacc ggaaccagcg tcggtctgac cagcgtcagc
    25261 cttggcgtaa tccgtgcaat ggaacgcaaa ggcgttcgtc tgagcgtttt caaacctatc
    25321 gctcagccgc gtaccggtgg cgatgcgccc gatcagacta cgactatcgt gcgtgcgaac
    25381 tcttccgcca cgacggccgc tgaaccgctg aaaatgagct acgttgaagg tctgctttcc
    25441 agcaatcaga aagatgtgct gatggaagag atcgtcgcaa actaccacgc taacaccaaa
    25501 gacgctgaag tcgttctggt tgaaggcctg gtcccgacac gtaagcacca gtttgcccag
    25561 tctctgaact acgaaatcgc taaaacgctg aatgcggaaa tcgtcttcgt tatgtctcag
    25621 ggcactgaca ccccggaaca gatgaaagag cgtatcgaac tgacccgcaa cagcttcggc
    25681 ggtgccaaaa acaccaacat caccggcgtt atcgttaaca aactgaacgc accggttgat
    25741 gaacagggtc gtactcgccc ggatctgtcc gagattttcg acgactcttc caaagctaaa
    25801 gtaaacaatg ttgatccggc gaagctgcaa gaatccagcc cgctgccggt tctcggcgct
    25861 gtgccgtgga gctttgacct gatcgcgact cgtgcgatcg atatggctcg ccacctgaat
    25921 gcgaccatca tcaacgaagg cgacatcaat actcgccgcg ttaaatccgt cactttctgc
    25981 gcacgcagca ttccgcacat gctggagcac ttccgtgccg gttctctgct ggtgacttcc
    26041 gcagaccgtc ctgacgtgct ggtggccgct tgcctggcag ccatgaacgg cgtagaaatc
    26101 ggtgccctgc tgctgactgg cggctacgaa atggacgcgc gcatttctaa actgtgcgaa
    26161 cgtgctttcg ctaccggcct gccggtattt atggtgaaca ccaacacctg gcagacctct
    26221 ctgagcctgc agagcttcaa cctggaagtt ccggttgacg atcacgagcg tatcgagaaa
    26281 gttcaggaat acgttgctaa ctacatcaac gctgactgga tcgaatctct gactgccact
    26341 tctgagcgca gccgtcgtct gtctccgcca gcgttccgtt atcagctgac tgaacttgcg
    26401 cgcaaagcgg gtaaacgtat cgttctgccg gaaggtgacg aaccgcgtac cgttaaagca
    26461 gccgctatct gtgctgaacg tggtatcgca acgtgcgtac tgctgggtaa tccggcagag
    26521 atcaaccgtg ttgcagcgtc acagggtgta gaactgggtg caggcattga aatcgttgat
    26581 ccagaagtgg ttcgcgaaag ctatgttggt cgtctggtcg agctgcgtaa gaacaaaggc
    26641 atgaccgaaa ccgttgcccg cgaacagttg gaagacaacg tggtgcttgg tacgctgatg
    26701 ctggaacagg atgaagttga tggtctggtt tccggtgctg ttcacactac cgcaaacacc
    26761 atccgtccgc cgctgcagct gatcaaaact gcaccgggca gctccttggt atcttccgtg
    26821 ttcttcatgc tgctgccgga acaggtttac gtttacggtg actgtgcgat caacccggat
    26881 ccgaccgcag aacagctggc agaaatcgcg attcagtccg ctgattccgc tgcagccttc
    26941 ggtatcgaac cgcgcgttgc tatgctctcc tactccaccg gtacttctgg tgcaggtagc
    27001 gacgtagaaa aagttcgcga agcaactcgt ctggcgcagg aaaaacgtcc tgacctgatg
    27061 atcgacggtc cgctgcagta cgacgctgca gtaatggctg acgttgcgaa atccaaagcg
    27121 ccgaactctc cggttgcagg tcgcgctacc gtgttcattt tcccggatct gaacaccggt
    27181 aacaccacct acaaagcggt acagcgttct gccgacctga tctccatcgg gccgatgctg
    27241 cagggtatgc gcaagccggt taacgacctg tcccgtggcg cactggttga cgatatcgtc
    27301 tacaccatcg cgctgactgc gattcagtct gcacagcagc agtaacctcg tcatcatccg
    27361 cagctttgcg ctgcggatat ctgaaccgga aatagtcact atttccggtt ttttattctc
    27421 ttaatttgca ttaatccttt ctgattatct tgcttaactg cgctgcatca atgaattgcg
    27481 ccatctcact ttgcatactt accactttgt tttgtgcaag ggaatatttg cgctatgtcc
    27541 gcaatcactg aatccaaacc aacaagaaga tgggcaatgc ccgatacgtt ggtgattatc
    27601 ttttttgttg ctattttaac cagccttgcc acctgggtag ttccggtggg gatgtttgac
    27661 agtcaggaag tgcagtatca ggttgatggt caaacaaaaa cacgcaaagt cgtagatcca
    27721 cactcatttc gcattctgac taacgaagca ggcgaacctg agtatcaccg cgtacagctg
    27781 ttcacgacgg gcgatgaacg cccgggcctg atgaacttcc cgtttgaagg gttaacctca
    27841 ggatcgaaat acgggacagc cgttagcatc atcatgttta tgctggtgat tggcggcgcg
    27901 tttggcattg tgatgcgtac aggaaccatt gataacggta tcctggcgct tattcgccat
    27961 acccgcggga atgaaattct ctttattcct gcgctgttta ttctgttttc acttggcggc
    28021 gcggtatttg gtatgggaga agaggccgtc gcctttgcca ttatcatcgc accgctaatg
    28081 gtccggctgg gctatgacag tattaccacc gtcctggtga cctatattgc cacgcaaatc
    28141 ggttttgcca gttcgtggat gaacccgttt tgtgtggtcg ttgctcaggg gattgccggc
    28201 gttccggtgc tttctggctc cgggttgcgc atcgtggtgt gggttatcgc cactctgatt
    28261 ggcctgatct ttaccatggt gtacgcctca cgagtgaaaa agaatcctct tctgtcacgc
    28321 gtgcatgagt ccgaccgctt ctttcgtgaa aagcaggctg atgttgaaca acgtccgttt
    28381 acctttggtg actggctggt attgattgtc ctgaccgccg taatggtctg ggtgatttgg
    28441 ggcgtgatcg ttaatgcctg gtttattcca gaaattgcca gccagttctt caccatgggt
    28501 ctggtgattg gcatcatcgg cgttgttttc cgccttaacg gcatgacgat taataccatg
    28561 gcttcatcct ttaccgaagg ggcgcgaatg atgatcgccc ctgccctgct ggtgggtttc
    28621 gccaaaggga ttttgctgct ggtcggtaat ggtgaagcgg gtgatgccag cgtgttaaat
    28681 accatcctca acagcattgc caatgccatt agcggtctgg acaacgctgt cgcggcctgg
    28741 tttatgttgc tcttccaggc ggtatttaat ttctttgtga catccggttc tggtcaggcg
    28801 gcgttaacca tgccgttact ggcaccgctt ggcgatctgg tcagtgttaa ccgtcaggtt
    28861 accgtgctgg cattccagtt tggtgatggc ttcagccaca tcatttaccc aacctcagct
    28921 tcgttaatgg cgacgctcgg tgtttgccgg gtggacttcc gtaactggct gaaggtgggc
    28981 gcgacactgc ttggactgct gtttattatg tccagcgtcg tggtgatcgg cgctcagttg
    29041 atgggctacc actaaaaatg ttaagagccg caattgcggc tcttttttca ttctgccgtt
    29101 tcagtctcta cggcttcatt tttggcattg cgcttcatcc acaacgccag cgctttcagc
    29161 gagtctggag tgaactcatc gcagcgtgcg gtgatttctt ccggcgtcag ccagcaaact
    29221 tcactgactt catcttcctg tagagcgaag ggaccgtgag agacgcagct gaacaacgcg
    29281 ccccagacac ggcaattttt atcttcgaaa tagaactgcc cgtgctcggc aaaggggaca
    29341 ccggcaatgc ccaactcttc ttccgcttcg cgacgcgcgg attccagcag ttgctcatcg
    29401 gcctggacca caccgcctgc ggtcgcatct aacatgccgg gtaaaaagtc ttttgtctcg
    29461 gtacgacgct ggaccagaat tttgcccatg ccatcatgca cgacgatgta agttgcacga
    29521 tgacgcagac actgtgcccg catttgttcc cggctggctt gtgcaatgac ttcgttctct
    29581 tcattgacaa tatccaccca ttcagtactt gccaaacgac gctgttccat tatcaggaaa
    29641 ccttcttttt ctggcgctct tacggcgcat tttgagttgt gggtaaatta cggattaatc
    29701 gctacctgcg caatgatact ttgatcattg agtgcgatta cactaagtac gtcattatcc
    29761 agcatgccat aactcgccgg attaccgcct ttcggaatac tcaccgagcc ggggttgaag
    29821 tggaaaatct ccccccgctg ttctgccact ggcagatggg tatgaccgta caccagcaca
    29881 tcgttctggt ttaaagcagg cagattttcc gggccaaaaa gatgaccatg cgtcaaaaac
    29941 agacgttgtt tttccagtaa tacctgttgc cacggcgcgg ttatcgggaa atgcagcagc
    30001 atttgatcca cttcgctgtc gcagttgccg cgcacagcga taaccttatg tgccacttca
    30061 ttaagccgtt cagcgacttt ggctggcgcg taaccctccg gtaaagcatt acgcgggcca
    30121 tgattcaaca cgtcgccaag gatcaccagc cactgggcac cgctttgggc aaacaactcc
    30181 agaacacgtt ccgtcgccgg taacgaccca tgaatgtccg atgcaaacat cagtttcatc
    30241 actcactcct cgtcgaaaaa acgtaagcta tgatactgga ttctgtcgtt gctatcagcc
    30301 agattgcttc gccgaaagtg caataaaacg ctggacagac gctcgctgcc actggaatgt
    30361 cgcataatcc accaggcgtt ctggcacctc atcgccatgt agtaccaggc ggttaatcat
    30421 tagcgccaga tcagtatcag caatgcacca ttcaccaaat aaattcggct gacccagtgc
    30481 taacaaatgt tctgccatcg cgaacagttt ctctgcactg gcttttccct cggccgttag
    30541 tggcgctttt ttcgcccccg caaagacaac atccgtcgga cgctcttcgc ggatgggcat
    30601 cagatcgctg cgcagccaag cctgaatctg tcgtgcacgc gcacgatttt ctaaatcaag
    30661 cggataaata cgttcccagg tcggtggcgc aaatcgatct tccagatact ccgcaatggc
    30721 agaagattca ctcaactcaa aatcatcgat ttgtaataac ggcacacggc gtgtctgacc
    30781 gtaaccttgc cacgtcggct gcaaatgttc accgctgtcg aggtcgatgg tcttgatatg
    30841 aaacgacagg cctttttcct acaacgccac ccaggcggat aacacataag gggagaaaaa
    30901 gtgggcatct gaccaaagcg tgatagcggg tttactcatt atgtcctcgg caataaaggg
    30961 ggctggctat caaactatag agcctttttg tcactgtcac gtgacgaata ctcacgtaag
    31021 tcgccgcgct ttctatactt gtggtgttca gatgattaaa caaccggagc tgcaatgatc
    31081 gatctctatt tcgccccgac acccaatggt cacaaaatta cgctgtttct cgaagaagca
    31141 gagcttgatt atcgcttgat taaggtagac ctggggaaag gcggtcagtt tcgtccggaa
    31201 tttttgcgca tttcgcccaa caacaaaatt ccggcaattg ttgatcattc tcctgccgat
    31261 ggcggcgaac cgctaagcct ctttgagtct ggtgccattt tgttgtatct ggctgagaaa
    31321 acaggactct ttttgagtca tgaaacgcgt gagcgcgccg ccacattaca gtggttattc
    31381 tggcaggtag gcggactggg gccgatgctt gggcaaaatc atcattttaa tcacgcagcc
    31441 ccccaaacca ttccttacgc tattgaacgt tatcaggttg aaactcagcg tctttaccat
    31501 gtactaaaca agcggctgga aaactcgccc tggctgggag gcgagaacta cagcattgcg
    31561 gatattgcct gctggccgtg ggttaatgcc tggactcgcc agcgaattga cctcgcaatg
    31621 tatccggcag tcaagaactg gcatgagcgg atccgttcgc gccctgccac cgggcaggca
    31681 ctgctaaaag cacaactcgg tgatgagcgt tcggatagtt aacagaaaca ggttctcgtg
    31741 tattatttca tcctaagtaa aacaacggag aacctgcaat ggcacaacct gccgctatta
    31801 ttcgtataaa gaaccttcgt ttacgtacgt ttatcggaat taaggaagaa gaaattaaca
    31861 accgtcagga tattgttatc aatgtgacga tccactaccc cgccgataaa gcgcgcacta
    31921 gcgaagatat caacgatgcg ctgaattatc gcaccgtaac gaaaaacatt attcagcatg
    31981 tagagaataa ccgtttctct ttgttggaaa aattaactca ggatgtgctc gatatcgcac
    32041 gtgaacatca ctgggtgacg tatgctgaag tggagatcga taaactgcac gcgctgcgct
    32101 acgccgattc ggtatccatg accttaagct ggcagcgtta accgccatat cgggaggctg
    32161 catgaacata gtgatcaccg gagggacggg attaattggt cgccatttga ttccgcgttt
    32221 gctggagctg ggccatcaaa tcacggtagt gacgcgtaac ccacagaaag ccagttccgt
    32281 tctcggccct cgggtgacgc tatggcaagg gctagccgat caaagcaacc tcaacggcgt
    32341 tgatgcggta atcaacctgg ccggagaacc gattgctgat aaacgctgga ctcacgagca
    32401 aaaagagcgt ctctgccaaa gccgctggaa tatcacgcaa aaactggtcg atttgattaa
    32461 tgccagcgac acgccgccgt cggtactcat ttccggctca gcaacgggct attatggcga
    32521 cttaggtgaa gtggtggtta ccgaagagga accgccgcat aacgaattta ctcataaact
    32581 ctgcgcccgc tgggaagaga ttgcctgccg ggcgcaaagt gacaaaacgc gagtgtgcct
    32641 gctgcgaacc ggcgtggtac tggcaccgga cggcggtatt ctcggtaaaa tgctgccacc
    32701 gtttcgtctt ggcctgggcg ggccgattgg ttccggtcgg cagtatctgg cctggattca
    32761 tattgatgat atggtcaacg gcattctctg gctgctggat aacgacctgc gcgggccatt
    32821 taatatggtt tcgccctacc cggtacgcaa tgaacaattt gcccatgcgc tcggtcaagc
    32881 gctgcatcgc ccggccattt tgcgcgtccc cgcaaccgcc attcggctgt taatgggcga
    32941 atcttcaata ctggtattag gtggacaacg cgcgctgcct aaacggctgg aagaagcggg
    33001 ttttgcgttt cgctggtacg atttagaaga ggcgctggcg gatgtcgttc gctgatgtgg
    33061 tttactgcaa acatccgcca gttaactccc ggtgttacag ggttagtggc tttgcgcgat
    33121 aagatcgtct ggtgaaagtc gggtcagcgt caggatgaca tcgtggtcaa atcctttttc
    33181 cagcatctcc tgagcaatac gcagagcttc ttcgtgtttg ccctgcattg cgccttcttc
    33241 acgtaatctg tcagcaatgg tcatcagttt ctccttttcc tgtggtgcgc gttctgttat
    33301 ctcaccaata aatgcacgga aacgctgggc atctcccgtt tgtaatacat aattaaacag
    33361 ggcttttagc tgtctgtcat tagtgttccc tgtaactaaa tagctgcgct taatacc
//
LOCUS       DAJVTL010000036        33149 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.036, whole genome shotgun sequence.
ACCESSION   DAJVTL010000036 DAJVTL010000000
VERSION     DAJVTL010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33149
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.036"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..200)
                     /locus_tag="OQQ26_001606"
     CDS             complement(<1..200)
                     /locus_tag="OQQ26_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HCS1857096.1"
                     /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
                     GRTALVIHPTLKERSSTLAEPAS"
     gene            352..681
                     /locus_tag="OQQ26_001607"
     CDS             352..681
                     /locus_tag="OQQ26_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HCS1857097.1"
                     /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDVKGEAE
                     AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAVAVGIFIGA
                     LLSMRKS"
     gene            929..1174
                     /gene="nrdH"
                     /locus_tag="OQQ26_001608"
     CDS             929..1174
                     /gene="nrdH"
                     /locus_tag="OQQ26_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HCS1857098.1"
                     /translation="MRITIYTRNDCVQCHATKRAMVNRGFDFEMINVDRVPEAAEALR
                     AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
     gene            1171..1581
                     /gene="nrdI"
                     /locus_tag="OQQ26_001609"
     CDS             1171..1581
                     /gene="nrdI"
                     /locus_tag="OQQ26_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HCS1857099.1"
                     /translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL
                     IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
                     VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
     gene            1554..3698
                     /gene="nrdE"
                     /locus_tag="OQQ26_001610"
     CDS             1554..3698
                     /gene="nrdE"
                     /locus_tag="OQQ26_001610"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HCS1857100.1"
                     /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
                     MATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHTSGFRFQTF
                     LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDEL
                     VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL
                     QVNSASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH
                     IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT
                     SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMW
                     AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
                     PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
     gene            3708..4667
                     /gene="nrdF"
                     /locus_tag="OQQ26_001611"
     CDS             3708..4667
                     /gene="nrdF"
                     /locus_tag="OQQ26_001611"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HCS1857101.1"
                     /translation="MKLSRISAINWNKITDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKIPLGQREEL
                     KSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA
                     EVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF"
     gene            5023..6225
                     /gene="proV"
                     /locus_tag="OQQ26_001612"
     CDS             5023..6225
                     /gene="proV"
                     /locus_tag="OQQ26_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein ProV"
                     /protein_id="HCS1857102.1"
                     /translation="MAIKLEIKNLYKIFGEHPQRAFKYIKQGLSKEQILEKTGLSLGV
                     KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
                     VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKAIDALRQVGLENYAHS
                     YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
                     VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
                     KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
                     QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
                     DRGGVNNG"
     gene            6218..7282
                     /gene="proW"
                     /locus_tag="OQQ26_001613"
     CDS             6218..7282
                     /gene="proW"
                     /locus_tag="OQQ26_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HCS1857103.1"
                     /translation="MADQNNPWDTTPAADSAAQSADAWGTPATAPTDGGGADWLTSTP
                     APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL
                     GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
                     IIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNHRWYTTGPVGLLTRPFIK"
     gene            7339..8331
                     /gene="proX"
                     /locus_tag="OQQ26_001614"
     CDS             7339..8331
                     /gene="proX"
                     /locus_tag="OQQ26_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HCS1857104.1"
                     /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKK
                     FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKSAKLFDTNGDGKADLTGCNPG
                     WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
                     KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLF
                     AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK"
     gene            8523..9707
                     /locus_tag="OQQ26_001615"
     CDS             8523..9707
                     /locus_tag="OQQ26_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857105.1"
                     /translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
                     ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRAL
                     LGCMTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
                     HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDAR
                     NRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
                     AN"
     gene            9831..10568
                     /gene="ygaZ"
                     /locus_tag="OQQ26_001616"
     CDS             9831..10568
                     /gene="ygaZ"
                     /locus_tag="OQQ26_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine exporter subunit YgaZ"
                     /protein_id="HCS1857106.1"
                     /translation="MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
                     FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
                     QRLQKSKTALWAFGLTDEFFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
                     FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
                     VAILAGIVCGCLTALIQAFWQGAPDEL"
     gene            10558..10893
                     /gene="ygaH"
                     /locus_tag="OQQ26_001617"
     CDS             10558..10893
                     /gene="ygaH"
                     /locus_tag="OQQ26_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine transporter subunit YgaH"
                     /protein_id="HCS1857107.1"
                     /translation="MSYEVLLLGLLVGAANYCFRYLPLRLRVGNARPTKRGAVGILLD
                     TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
                     LAWKVIAII"
     gene            10984..11514
                     /gene="emrR"
                     /locus_tag="OQQ26_001618"
     CDS             10984..11514
                     /gene="emrR"
                     /locus_tag="OQQ26_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter EmrAB
                     transcriptional repressor EmrR"
                     /protein_id="HCS1857108.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
                     RLDQMEQDGVVLEAMS"
     gene            11639..12811
                     /gene="emrA"
                     /locus_tag="OQQ26_001619"
     CDS             11639..12811
                     /gene="emrA"
                     /locus_tag="OQQ26_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HCS1857109.1"
                     /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
                     VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTNARQAFE
                     KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
                     QHARDAVTSAQEQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
                     DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP
                     LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG"
     gene            12828..14366
                     /gene="emrB"
                     /locus_tag="OQQ26_001620"
     CDS             12828..14366
                     /gene="emrB"
                     /locus_tag="OQQ26_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HCS1857110.1"
                     /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSL
                     NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
                     MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
                     ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
                     RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
                     ERLATASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
                     EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
                     GGAH"
     gene            complement(14430..14945)
                     /gene="luxS"
                     /locus_tag="OQQ26_001621"
     CDS             complement(14430..14945)
                     /gene="luxS"
                     /locus_tag="OQQ26_001621"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HCS1857111.1"
                     /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
                     KEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
                     LPKEKLQELHI"
     gene            complement(15095..16651)
                     /gene="gshA"
                     /locus_tag="OQQ26_001622"
     CDS             complement(15095..16651)
                     /gene="gshA"
                     /locus_tag="OQQ26_001622"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HCS1857112.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF
                     EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
                     IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
                     IGCETAQFPLLQVGKDLFRDLKRVAQTLDSINGGEAYQKVCDELVACFDNPDLTFSAR
                     ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASECRQQEMETADTE
                     PFAVWLEKHA"
     gene            complement(16724..17152)
                     /locus_tag="OQQ26_001623"
     CDS             complement(16724..17152)
                     /locus_tag="OQQ26_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1857113.1"
                     /translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLV
                     LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
                     LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
     gene            complement(17149..17715)
                     /gene="yqaB"
                     /locus_tag="OQQ26_001624"
     CDS             complement(17149..17715)
                     /gene="yqaB"
                     /locus_tag="OQQ26_001624"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
                     /protein_id="HCS1857114.1"
                     /translation="MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMI
                     ALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGR
                     RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT
                     QCVVFEDADFGIQAARAAGMDAVDVRLL"
     gene            complement(17863..17939)
                     /locus_tag="OQQ26_001625"
     tRNA            complement(17863..17939)
                     /locus_tag="OQQ26_001625"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17903..17905),aa:Arg,seq:acg)
     gene            complement(18003..18079)
                     /locus_tag="OQQ26_001626"
     tRNA            complement(18003..18079)
                     /locus_tag="OQQ26_001626"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18043..18045),aa:Arg,seq:acg)
     gene            complement(18144..18220)
                     /locus_tag="OQQ26_001627"
     tRNA            complement(18144..18220)
                     /locus_tag="OQQ26_001627"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18184..18186),aa:Arg,seq:acg)
     gene            complement(18224..18316)
                     /locus_tag="OQQ26_001628"
     tRNA            complement(18224..18316)
                     /locus_tag="OQQ26_001628"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18280..18282),aa:Ser,seq:gct)
     gene            complement(18632..18817)
                     /gene="csrA"
                     /locus_tag="OQQ26_001629"
     CDS             complement(18632..18817)
                     /gene="csrA"
                     /locus_tag="OQQ26_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HCS1857115.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            complement(19052..21682)
                     /gene="alaS"
                     /locus_tag="OQQ26_001630"
     CDS             complement(19052..21682)
                     /gene="alaS"
                     /locus_tag="OQQ26_001630"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HCS1857116.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
                     SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKGANFSFVVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
                     PIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
                     QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
                     STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVKGWVSAKLQ"
     gene            complement(21810..22310)
                     /gene="recX"
                     /locus_tag="OQQ26_001631"
     CDS             complement(21810..22310)
                     /gene="recX"
                     /locus_tag="OQQ26_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HCS1857117.1"
                     /translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN
                     GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNKKGIS
                     REATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
                     WRNFAD"
     gene            complement(22538..23599)
                     /gene="recA"
                     /locus_tag="OQQ26_001632"
     CDS             complement(22538..23599)
                     /gene="recA"
                     /locus_tag="OQQ26_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HCS1857118.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
                     TPDFSVDDSEGVAETNEDF"
     gene            complement(23679..24176)
                     /gene="pncC"
                     /locus_tag="OQQ26_001633"
     CDS             complement(23679..24176)
                     /gene="pncC"
                     /locus_tag="OQQ26_001633"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HCS1857119.1"
                     /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
                     SSAWFERGFVTYSNEAKAQMICVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSI
                     SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
                     FLQNT"
     gene            complement(24321..25406)
                     /gene="mltB"
                     /locus_tag="OQQ26_001634"
     CDS             complement(24321..25406)
                     /gene="mltB"
                     /locus_tag="OQQ26_001634"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HCS1857120.1"
                     /translation="MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
                     SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
                     VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
                     GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
                     GQAPGLPNGFKTRYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
                     ITRYNHSTHYAMAVWQLGQAVALARVQ"
     gene            25661..26224
                     /gene="srlA"
                     /locus_tag="OQQ26_001635"
                     /gene_synonym="gutA"
     CDS             25661..26224
                     /gene="srlA"
                     /locus_tag="OQQ26_001635"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HCS1857121.1"
                     /translation="MIETITHGAEWFIGLFQKGGEGFTGMVTGILPLLISLLVIMNAL
                     INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLAGATS"
     gene            26221..27180
                     /gene="srlE"
                     /locus_tag="OQQ26_001636"
                     /gene_synonym="gutE"
     CDS             26221..27180
                     /gene="srlE"
                     /locus_tag="OQQ26_001636"
                     /gene_synonym="gutE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HCS1857122.1"
                     /translation="MTHIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQ
                     LTGWQAIDGFKEGEPAEAEIGIAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITVVGDATPQPSVVGRDYDNNKKITEQSDGLLAKVGMGMGSAVA
                     VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
                     LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
                     GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
     gene            27191..27562
                     /gene="srlB"
                     /locus_tag="OQQ26_001637"
                     /gene_synonym="gutB"
     CDS             27191..27562
                     /gene="srlB"
                     /locus_tag="OQQ26_001637"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HCS1857123.1"
                     /translation="MTVIYQTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
                     HGELKGELHPGLQFTLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
                     AGPVPDDIAPGSVLKFESVKE"
     gene            27566..28345
                     /gene="srlD"
                     /locus_tag="OQQ26_001638"
     CDS             27566..28345
                     /gene="srlD"
                     /locus_tag="OQQ26_001638"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HCS1857124.1"
                     /translation="MNQVAVVIGGGQILGAFLCHGLAAEGYRVAVVDIQSDKAANVAQ
                     EINAEYGEGTAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            28451..28810
                     /gene="gutM"
                     /locus_tag="OQQ26_001639"
     CDS             28451..28810
                     /gene="gutM"
                     /locus_tag="OQQ26_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HCS1857125.1"
                     /translation="MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGR
                     SSGRFKPRVVVAIALDDQQCIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPH
                     DPLSQNALSLALKLKRG"
     gene            28877..29650
                     /gene="srlR"
                     /locus_tag="OQQ26_001640"
                     /gene_synonym="gutR"
     CDS             28877..29650
                     /gene="srlR"
                     /locus_tag="OQQ26_001640"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HCS1857126.1"
                     /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
                     VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
                     FEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
                     VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
     gene            29643..30608
                     /gene="gutQ"
                     /locus_tag="OQQ26_001641"
     CDS             29643..30608
                     /gene="gutQ"
                     /locus_tag="OQQ26_001641"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
                     /protein_id="HCS1857127.1"
                     /translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK
                     VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPVEALHGDLGMIESRDVMLFISYSGGA
                     KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
                     LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV
                     MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTL
                     QAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
     gene            complement(30605..32119)
                     /gene="norR"
                     /locus_tag="OQQ26_001642"
     CDS             complement(30605..32119)
                     /gene="norR"
                     /locus_tag="OQQ26_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311592.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HCS1857128.1"
                     /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
                     RYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
                     LLIEQLESQNMLPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
                     TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNCSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRGLQYGDIQRVGDDRSLRGDVRVLAATNRDLREE
                     VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGAR
                     NLLQHYSFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAIPEVTLPPPEAAAVP
                     VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD"
     gene            32306..>33149
                     /locus_tag="OQQ26_001643"
     CDS             32306..>33149
                     /locus_tag="OQQ26_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HCS1857129.1"
                     /translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLCNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     AETAP"
BASE COUNT         7861 a         8851 c         8336 g         8101 t
ORIGIN      
        1 gaagcgggtt cagccagtgt tgaactgcgt tcttttaatg ttggatgaat taccagagcg
       61 gtacgtccca ttcgcgcttc gcgattaaca tagacataat tttccccacg gcggtaacca
      121 tacgctttct gggttaccac atcgacagta aaaccgactt tttcaagtac gcgcgccacc
      181 tcgtctggtc gtaaatacat atttgatcct cgttattatc aaccgcgggc ctaccttacc
      241 tgattgcgca ttcacaacgc tttcagaaaa gtccataaag ccgcgatgaa cctcagttaa
      301 gaaaattatg gtctacactg aaaattacat cgaattctaa tgggggatca tatgtttaac
      361 cgaccgaacc gcaacgacgt tgatgatggc gtgcaggata tccagaatga tgtcaatcaa
      421 ttagctgaca gcctcgaatc tgtattgaag tcctggggca gcgacgtcaa aggggaagct
      481 gaagccgcac gcagtaaagc tcaggcattg ctgaaagaaa ccagggcgcg aatgcatggt
      541 cgtactcgcg tccagcaagc cgcacgcgat gccgttggct gcgcggattc ttttgttcgt
      601 gaaagaccct ggtgtagcgt gggtacagca gttgcggtag gtatttttat cggcgcactg
      661 ttaagcatgc gcaaatcgta gtgcaaaaat gataataaat acgcgtcttt aaccccgaag
      721 cctgtcttcg gggtttcttt ttgcctggtg aatcacaaaa atccccctac cccgtcacac
      781 tcatatcccg ggtaatttcg accactattt gctatatatt gtgtggttga atcttttttc
      841 aactacatct agtatctctg tatcaacaga gagacaaccc gacgcgtatc atcgcgccgt
      901 atcttcattt taaacggaaa tacgaatcat gcgcattact atttacactc gtaacgattg
      961 cgttcagtgc cacgccacca aacgggcgat ggtaaaccgg ggctttgatt ttgaaatgat
     1021 taatgtcgat cgcgttcctg aagcggcaga agcgttgcgt gctcagggct ttcgtcagtt
     1081 gccggtagtg attgctggcg atcttagctg gtctggtttc cgtccggaca tgattaaccg
     1141 tctgcatcca gcgccacacg cggccagtgc atgagccagc tcgtctactt ctccagcagc
     1201 tccgaaaaca cgcagcgttt tatcgaacgt ttaggtctgc ccgcggtgcg catcccgctc
     1261 aatgagcggg aacggattca ggtagacgag ccttacatcc tgatcgtgcc ctcttacggc
     1321 ggcggcggta cggctggcgc ggtgccacga caggtaattc gctttttaaa cgacgagcac
     1381 aaccgggcgt tgcttcgcgg cgttattgct tctggtaatc gcaactttgg tgaggcgtat
     1441 ggtcgcgccg gagatgtgat tgcccggaaa tgcggcgtgc cgtggctgta ccgttttgaa
     1501 ctcatgggta cgcaaagcga tatcgaaaac gttcgtaaag gagtaaccga attttggcaa
     1561 cgacaaccgc agaatgcctg acgcaggaaa cgatggatta ccacgcgctg aatgcgatgc
     1621 ttaacctcta cgatagcgca ggtcgcattc agttcgataa agaccgccag gccgttgacg
     1681 cctttatggc gacgcatgtg cgtccgaaca gtgtgacctt cagtagccag cagcagcgcc
     1741 tgaactggct ggtcaacgaa ggttactatg atgaaagcgt tcttaatcgc tactctcgcg
     1801 actttgtcat tacgctgttt gcccacgcac acaccagcgg ttttcgtttc cagacattcc
     1861 tcggggcatg gaagttttac accagctata cgttgaagac attcgacggt aaacgttatc
     1921 tggaagattt tgccgatcga gtcacgatgg tggcgctgac gctggcacaa ggcgatgcga
     1981 cgctggcgtt gcaactgacc gatgaaatgc tgtcaggacg ctttcagcca gccacgccga
     2041 cattcctcaa ctgcggtaag cagcagcgcg gcgaactggt ttcctgtttt ctgctgcgta
     2101 ttgaagacaa tatggagtcg attggccggg cggtaaattc cgcactgcaa ctgtcgaaac
     2161 gcggcggcgg cgtggcattt ttgctgtcga atctgcgaga agcgggcgcg ccaattaaac
     2221 gtattgaaaa tcaatcttct ggcgtaattc cggtgatgaa aatgctggaa gacgcatttt
     2281 cctatgccaa ccaactcggc gcgcgtcagg gggcaggtgc agtctattta catgctcatc
     2341 atcccgatat tctgcgtttt ctcgatacaa aacgggaaaa tgccgacgaa aaaatccgca
     2401 ttaaaacact gtcgctgggc gtggtgatcc cggatatcac tttccatctg gcaaaagaga
     2461 atgcgcagat ggcgctgttt tcgccctatg acgttgagcg agtttatggc aagccgtttg
     2521 ccgatatcgc cattagcgaa cactatgacg aactggttgc cgatgaacgc atccgcaaaa
     2581 aatacctcaa cgcccgtgat ttcttccagc gactggcaga aatccagttt gagtccggct
     2641 atccctacat catgtatgaa gacacggtaa accgtgctaa ccctatcgcc gggcgcataa
     2701 atatgagtaa tctctgctca gaaattttgc aggttaacag cgcctcagag tatgacgaga
     2761 atctcgacta tgcccgcaca ggccatgata tttcctgtaa tttaggttcg ttgaatattg
     2821 cgcacaccat ggattccccc gactttgctc gcacggtaga aactgccgta cgcggtttaa
     2881 cggcggtgtc agatatgagt catatccgca gcgtgccgtc catcgaagcc ggaaatgccg
     2941 cctcgcacgc catcggactg gggcagatga atttacacgg ctatctggcg cgagaaggca
     3001 tcgcttatgg ttcgccggaa gcactggatt tcaccaatct ctatttctat gccatcacct
     3061 ggcacgcact gcgtacctcg atgttgctgg cacgcgaacg cggtgaaacc ttcgccgggt
     3121 tcaaacagtc acgctatgcc agtggtgaat atttcagcca atatctgcaa ggtaactggc
     3181 agccgaaaac ggcgaaagtt ggcgaactgt ttgcccgcag cggtattacg ttacctaccc
     3241 gtgagatgtg ggcgcaactg cgcgacgacg tgatgcgcta cggcatatac aaccagaatc
     3301 tccaagcggt gccgccaacc ggttctatct cttatatcaa ccatgctacg tcgagtattc
     3361 atccgattgt ggcgaaagta gagatacgca aagagggcaa aacaggacgc gtttactacc
     3421 ctgccccgtt tatgactaac gaaaatctgg cgctgtatca ggacgcttac gaaattggcg
     3481 cagaaaagat tatcgacacc tacgcggaag cgactcgcca tgtcgatcag gggctgtcgc
     3541 tgacgctgtt tttccccgat accgccacca ctcgcgatat caacaaagcg cagatttacg
     3601 cctggcgcaa gggtatcaaa acgctctatt acattcgcct gcgccagatg gcgctggaag
     3661 gcactgaaat tgaaggctgc gtctcctgtg cactttaagg aatatctatg aaactctcac
     3721 gtatcagcgc catcaactgg aacaagataa cagacgataa agatctggag gtgtggaatc
     3781 gcctgaccag caatttctgg ctaccagaaa aggtgccgct gtcgaacgat attcctgcct
     3841 ggcagacatt aactgtcgta gaacaacaac tgacgatgcg cgtttttact ggcctgacgc
     3901 tgctcgacac gctgcaaaat gttatcggcg cgccttcgct gatgcccgat gcactcacgc
     3961 ctcatgaaga agcggtatta tcgaatatca gctttatgga agcggttcat gcccgctctt
     4021 acagttcgat tttctcgacg ctgtgccaga ccaaagatgt cgatgccgcc tacgcctgga
     4081 gtgaagaaaa cgcaccgttg cagcgaaaag ctcagattat tcagcaacat tatcgcggtg
     4141 atgatccgct gaaaaagaaa atcgccagtg tgtttcttga atcttttttg ttctattccg
     4201 gtttctggct gccgatgtat ttttccagcc gcggaaagct gaccaatacc gcggacctga
     4261 tccgtctgat tatccgcgat gaagcagtcc acggttacta cataggctat aaatatcaga
     4321 aaaacatgga aaagatacct ctgggacaac gtgaagagtt gaagagtttc gccttcgatt
     4381 tgttgctgga actctacgac aacgagttgc aatacaccga tgagctgtac gccgaaaccc
     4441 cgtgggctga cgatgtgaaa gcgtttctct gttacaacgc caataaggct ttgatgaatc
     4501 tgggctacga accgttattt cccgcagaaa tggcggaagt gaatccggca atcctcgccg
     4561 cgctttcgcc gaatgccgat gaaaatcacg atttcttttc cggttcaggc tcctcttatg
     4621 tgatggggaa agcggttgaa acagaagatg aagactggaa tttctgaggg tgttattttc
     4681 aaaaatatca ctacccgcga cagggaaata attcccgcca aatagctttt tatcacgcaa
     4741 atattttgtg gtgatctaca ctgatactct gttgcattat tcgcctgaaa ccacaatatt
     4801 caggcgtttt ttcgctatct ttgacaaaaa atatcaactt ttctcgattt gctctcagcc
     4861 cttatatcac gggaaattcc ggcgatttgc tcgcatcaat attcatgcca catttgccat
     4921 caggggttgc ctcagattct cagtatgtta gggtagaaaa aagtgactat ttccattggg
     4981 taatatatcg acataaacaa ataacaggaa tctttctatt gcatggcaat taaattagaa
     5041 attaaaaatc tttataaaat atttggtgag catccacagc gagcgttcaa atatatcaaa
     5101 caaggacttt caaaagaaca aattctggaa aaaactgggc tatcgcttgg cgtaaaagac
     5161 gccagtctgg ccattgaaga aggcgagata tttgtcatca tgggattatc cggttcgggt
     5221 aaatccacaa tggtacgcct tctcaatcgc ctgattgaac ccacccgcgg gcaagtgctg
     5281 attgatggtg tggatattgc caaaatatcc gacgccgaac tccgtgaggt gcgcagaaaa
     5341 aagattgcga tggtcttcca gtcctttgcc ttaatgccgc atatgaccgt gctggacaat
     5401 actgcgtttg gtatggaatt ggccggaatt aatgccgaag aacgccggga aaaagccatt
     5461 gatgcactgc gtcaggtcgg gctggaaaat tatgcccaca gctacccgga tgaactctct
     5521 ggcgggatgc gtcaacgtgt gggattagcc cgcgcgttag cgattaatcc ggatatttta
     5581 ttaatggatg aagccttctc ggcgctcgat ccattaattc gcaccgagat gcaggatgag
     5641 ctggtaaaat tacaggcgaa acatcagcgc accattgtct ttatttccca cgatctcgat
     5701 gaagccatgc gtattggcga ccgaattgcc attatgcaaa atggtgaagt ggtacaagtc
     5761 ggcacaccgg atgaaattct caataatccg gcgaatgatt atgtccgtac cttcttccgt
     5821 ggcgtcgata ttagtcaggt attcagtgcg aaagatattg cccgtcgtac accgaacggc
     5881 ttaattcgta aaacccctgg cttcggccca cgttcggcac tgaaattatt gcaggatgaa
     5941 gatcgcgaat atggctacgt catcgaacgc ggtaataagt ttgtcggcgc tgtgtctatc
     6001 gattcgctta aaaccgcgtt aacgcagcag caaggtcttg atgcggcgct gattgatgcg
     6061 ccattagcgg tcgatgcgca aacgcctctt agcgagttgc tctctcatgt cggacaggca
     6121 ccctgtgcgg tgcccgtggt cgacgaggac caacagtatg tcggcatcat ttcgaaagga
     6181 atgctgctgc gcgctttaga tcgtgggggg gtaaataatg gctgatcaaa ataatccgtg
     6241 ggataccacg ccagcggcgg acagtgccgc acaatccgca gacgcctggg gtacaccggc
     6301 gactgcaccg actgacggcg gtggtgctga ctggctgacc agtacgcctg cgccaaacgt
     6361 cgagcatttt aatattctcg atccgttcca taaaacgctg atcccgctcg acagttgggt
     6421 cactgaaggg atcgactggg tcgttaccca tttccgtccc gtcttccagg gtgtgcgcgt
     6481 tccggttgat tatatcctca acggtttcca gcaattgctg ctgggtatgc cagcgccggt
     6541 ggcgattatc gttttcgctc tcatcgcctg gcaaatttcc ggtgtcggaa tgggcgtggc
     6601 gacgctggtt tcgctgattg ccatcggcgc aatcggtgcc tggtcacagg caatggtgac
     6661 tctggcgctg gtgttaaccg ccctgctgtt ctgtatcatc atcggtttgc cgttggggat
     6721 ctggctggcg agaagtccac gagcggcgaa aattattcgt ccactgcttg atgccatgca
     6781 gaccacacca gcgtttgttt atctggtgcc aatcgtcatg ctatttggta tcggtaacgt
     6841 gccgggcgtg gtggtgacga tcatctttgc tctgccgccg attatccgtc tgaccattct
     6901 ggggattaac caggttccgg cggatctgat tgaagcctcg cgctcattcg gtgccagccc
     6961 gcgccagatg ctgttcaaag ttcagttacc gctggcgatg ccgaccatta tggcgggcgt
     7021 taaccagacg ctgatgctgg ccctttctat ggtggtcatt gcctcgatga ttgccgtcgg
     7081 cgggctgggt cagatggtac ttcgcggtat cggtcgtctg gatatggggc ttgccaccgt
     7141 tggcggcgtc gggattgtga tcctcgccat tatcctcgat cgtctgacgc aggccgttgg
     7201 gcgcgactca cgcagtcgcg gcaaccatcg ctggtacacc actggccctg tcggtctgct
     7261 gacccgccca ttcattaagt aactctgcac ttgcccggtg acgccgggca tatcaccctg
     7321 ccaaaaaaag gaataacaat gcgacatagc gtactttttg cgacagcgtt tgccacgctt
     7381 atctctacac aaacttttgc tgccgatctg ccgggcaaag gtattactgt taatccagtt
     7441 caaagcacca tcaccgaaga aaccttccag acgctgctgg tcagccgtgc gctggagaaa
     7501 ttaggctata ccgtcaacaa acccagcgaa gtagattaca acgttggcta cacctcgctt
     7561 gcttccggcg atgcaacctt caccgccgtg aactggacgc cactgcatga caacatgtac
     7621 gaagctgccg gtggcgataa gaaattttat cgtgaagggg tatttgttaa cggcgcggca
     7681 cagggttacc tgatcgataa gaaaaccgcc gaccagtaca aaatcaccaa catcgcacaa
     7741 ctgaaagatc cgaagagcgc caaactgttc gataccaacg gcgacggtaa agcggatttg
     7801 actggctgta accctggctg gggctgcgaa ggtgcgatca accaccagct tgccgcgtat
     7861 gaactgacca ataccgtgac gcataatcag gggaactacg cagcgatgat ggccgacacc
     7921 atcagtcgct acaaagaggg caaaccggtg ttttactaca cctggacgcc gtactgggtg
     7981 agtaacgaac tgaagccggg caaagatgtc gtctggttgc aggtgccgtt ctccgcactg
     8041 ccgggcgata aaaatgccga taccaaactg ccgaatggcg cgaattacgg cttcccggtc
     8101 agcaccatgc atatcgttgc caacaaagcc tgggccgaga aaaatccggc ggcagccaaa
     8161 ctgtttgcca ttatgcagtt gccagtggca gatattaatg cccagaacgc cattatgcat
     8221 gacggcaaag cctcagaagg cgatattcag ggccatgttg atggttggat caaagcccac
     8281 cagcagcagt tcgatggctg ggtgaatgag gcgctggcag cgcagaagta atttttattc
     8341 gggcggataa ggcgttttcg cctcatccgc cgctctgtac acaatgcctg atgcgacgct
     8401 gacgcgtcct atcatgccta caaaccacat cgcacatttc aacaagctat ctttcatccc
     8461 atattcatca acatccgcta ttattgattt ccagcttaat catcacctga tgaacaaaaa
     8521 taatgactaa acctaatcat gagcttagcc cggcgctgat cgtgctgatg tctatcgcca
     8581 ccggtctggc ggtagccagt aactattacg cccagccatt gctcgacacc atcgcgcgta
     8641 acttttccct ttccgccagt tcggcaggct ttattgttac cgccgcgcag ttgggctatg
     8701 ccgcaggtct actgtttctt gttcccctcg gtgatatgtt tgaacgccgc cgcctgattg
     8761 tctcgatgac cttactggca gcgggcggta tgttaatcac tgccagcagt cagtcactgg
     8821 cgatgatgat cctcggtacg gcattaaccg gtttattctc agtcgtggca caaattctgg
     8881 ttccgctggc agcgacgctg gcttcaccgg ataaacgcgg caaagtggtt ggcaccatta
     8941 tgagcggtct gctgttgggg atattgctgg cacgaaccgt tgccgggtta ctggcaaacc
     9001 tcggcggctg gcgcaccgtc ttttgggttg cttcggtgtt aatggcactg atggcactgg
     9061 cattatggcg tggtctgcca caaatgaaat cagaaaccca cctcaactac ccacagttgt
     9121 tgggttccgt tttcagcatg ttcatcagcg ataagatcct gcgcacccgc gcgttgctgg
     9181 gctgcatgac ctttgccaac ttcagcattc tctggacctc aatggccttt ttgcttgccg
     9241 ctccaccttt taactacagc gatggtgtca ttggtctgtt tgggcttgcg ggagctgccg
     9301 gagcgttggg cgctcgtccg gcgggcggtt ttgccgacaa gggcaaatcg caccacacca
     9361 caactttcgg tctgcttctg ctgttacttt catggctggc aatctggttt ggtcacactt
     9421 ccgtactggc gttgattatc ggcattctgg tgctggacct caccgtacag ggcgtgcata
     9481 tcactaacca gacggtaatt tatcgaatac atcctgatgc gcgtaatcgc ctgaccgcag
     9541 gttacatgac cagctacttt attggcggtg ccgccggttc gctaatttca gcctcagcct
     9601 ggcaacatgg cggttgggct ggcgtttgtc tggctggcgc gacgattgcc ctggttaact
     9661 tactggtctg gtggcgaggt tttcatcgtc aggaagccgc aaattaagca atcagcaacc
     9721 gttttcgtgg ctttacactt ataagggtgt taagaagccc atcagtctga taaggttaag
     9781 atattcattc agtctattta taatattaac aatcgttaag cgtacactct atggaaagcc
     9841 ctactccaca gcctgctcct ggttcggcga ccttcatgga aggatgcaaa gacagtttac
     9901 cgattgttat tagttatatt ccggtggcct ttgcgttcgg tctgaatgcg acccgtctgg
     9961 gattctctcc tctcgaaagc gtttttttct cctgcatcat ttatgcaggc gcgagccagt
    10021 tcgtcattac cgcgatgctg gcagccggga gtagtttgtg ggttgctgca ctgaccgtca
    10081 tggcaatgga tgttcgccat gttttgtatg gcccgtcact gcgtagccgt attattcagc
    10141 gtctgcaaaa atcgaaaacc gccctatggg cgtttggcct gacggatgag ttttttgccg
    10201 ccgccaccgc aaaactggta cgcaataatc gccgctggag cgagaactgg atgatcggca
    10261 ttgccttcag ttcatggtca tcgtgggtat ttggtacggt aataggggca ttctccggca
    10321 gcggcttgct gcaaggttat cccgccgttg aagctgcatt aggttttatg cttccggcac
    10381 tctttatgag tttcctgctc gcctctttcc agcgcaaaca atctctttgc gttaccgcag
    10441 cgttagttgg tgcccttgca ggcgtaacgc tattttctat tcccgtcgcc attctggcag
    10501 gcattgtctg tggctgcctc actgcgttaa tccaggcatt ctggcaagga gcgcccgatg
    10561 agctatgagg ttctgctgct tgggttactg gttggcgcgg cgaattattg cttccgctat
    10621 ttgccgctgc gcctgcgtgt gggtaatgcc cgcccaacca aacgtggcgc ggtaggtatt
    10681 ttgctcgaca ccattggcat cgcctcgata tgcgctctgc tggttgtctc taccgcacca
    10741 gaagtgatgc acgatacacg ccgtttcgtg cccacgctgg tcggcttcgc ggtactgggt
    10801 gccagtttct ataaaacacg cagcattatc atcccaacac tgcttagtgc gctggcctat
    10861 gggctcgcct ggaaagtgat agcgattata taacccacaa gaatcatttt tctaaaacaa
    10921 tacatttact ttatttgtca ctatcgttac tatatcggct gaaattaatg aggtcatacc
    10981 caaatggata gttcgtttac gcccattgaa caaatgctaa aatttcgcgc cagccgccac
    11041 gaagattttc cttatcagga gatccttctg actcgtcttt gcatgcacat gcaaagcaag
    11101 ctgctggaga accgcaataa aatgctgaag gctcagggga ttaacgagac gttgtttatg
    11161 gcgttgatta cgctggagtc tcaggaaaac cacagtattc agccttctga attaagttgt
    11221 gctcttggat catcccgtac caacgcgacg cgtattgccg atgaactgga aaaacgcggt
    11281 tggatcgaac gtcgtgaaag cgataacgat cgccgctgcc tgcatctgca attaacggaa
    11341 aaaggtcacg agtttttgcg cgaggtttta ccaccgcagc ataactgcct gcatcaactc
    11401 tggtccgcgc tcagcacaac agaaaaagat caactcgagc aaatcacccg caaattgctc
    11461 tcccgtctcg accagatgga acaagacggt gtggttctcg aagcgatgag ctaacgcgtc
    11521 atctcgctca aaaatccaga tttataaaag aaaatgaccg gccagcatcg caacatgctg
    11581 gcctttttgg caagcaggtc ggctcagccg atgagttaag aagatcgtgg agaacaatat
    11641 gagcgcaaat gcggagactc aaaccccgca gcaaccggta aagaagagcg gcaaacgtaa
    11701 gcgtctgctc ctccttctca ccttgctctt tataattatt gccgtagcga tagggattta
    11761 ttggtttttg gtactgcgtc atttcgaaga aaccgatgac gcatacgtgg cagggaatca
    11821 gattcaaatt atgtctcagg tgtctggcag cgtgacgaaa gtctgggccg ataacaccga
    11881 ttttgtaaaa gaaggcgacg tgctggtcac tctcgacccg acaaatgctc gccaggcgtt
    11941 tgaaaaagcc aaaactgcac tggcttccag cgttcgccaa acccaccagc tgatgattaa
    12001 cagcaaacag ttgcaggcga atattgaggt gcagaaaatc gccctcgcaa aagcacaaag
    12061 cgactacaac cgccgtgtgc cgctgggcaa tgccaacctg attggtcgcg aagagctgca
    12121 acacgcccgc gacgccgtca ccagtgccca ggagcaactg gacgtcgcta ttcaacaata
    12181 caatgccaat caggcgatga ttctggggac taaactggaa gatcagcctg ccgtgcaaca
    12241 ggctgccacc gaagtacgta acgcctggct ggcgctggag cgtacccgta ttgtcagtcc
    12301 gatgaccggt tatgtttccc gtcgtgccgt gcaaccgggt gcgcaaatta gcccaacgac
    12361 gccgctgatg gcggtcgttc cagccaccaa tatgtgggtg gatgccaact ttaaagagac
    12421 gcagattgcc aatatgcgta tcggtcagcc ggtcactatc accacggata tttacggcga
    12481 tgatgtgaaa tacaccggta aagtggttgg tctggatatg ggcacaggta gcgcattctc
    12541 actgcttccg gcgcaaaatg cgaccggtaa ctggatcaaa gtcgttcagc gcctgcctgt
    12601 gcgtatcgaa ctggaccaga aacagctgga gcaatacccg ctgcgtatcg gtttgtccac
    12661 gctggtgagc gtcaatacca ctaaccgtga cggtcaggta ctggcaaata aagtacgttc
    12721 cacaccggtt gcggtaagta ccgcacgtga aatcagccta gcacctgtca ataaactgat
    12781 cgacgatatc gtaaaagcta acgctggcta atccagaggt gcgtgtgatg caacagcaaa
    12841 aaccgctgga aggcgcgcaa ctggtcatta tgacgattgc gctgtcactg gcgacattca
    12901 tgcaggtgct ggactccacc attgctaacg tggcgatccc cactatcgcc gggaatctgg
    12961 gctcatcgct cagccaggga acgtgggtaa tcacttcttt cggggtggcg aatgccatct
    13021 cgatcccgct taccggctgg ctggcaaagc gcgtcgggga agtgaaactg ttcctctggt
    13081 caaccatcgc ctttgctatt gcgtcgtggg cgtgtggtgt ctccagcagc ctgaatatgc
    13141 tgatcttctt ccgcgtgatt caggggattg tcgccgggcc gttgatcccg ctttcgcaaa
    13201 gtctattgct gaataactac ccgccagcca aacgctcgat cgcgctggca ctgtggtcga
    13261 tgacggtgat tgtcgcgcca atttgcggcc cgatcctcgg cgggtatatc agcgataatt
    13321 accactgggg ctggatattc ttcatcaacg tgccgattgg cgtggcggtg gtgttgatga
    13381 cactgcaaac tctgcgcgga cgtgaaaccc gcaccgaacg gcggcggatt gatgccgtgg
    13441 ggctggcact gctggttatt ggtatcggta gcctgcagat tatgctcgac cgcggtaaag
    13501 agctggactg gttttcatca caggaaatta tcattcttac cgtggtggcg gtggtggcta
    13561 tctgcttcct gattgtctgg gagctgaccg acgataaccc gatagtcgat ctgtcgttgt
    13621 ttaagtcgcg caacttcacc atcggctgct tgtgtatcag cctcgcgtat atgctctact
    13681 tcggcgcgat tgttctgctg ccgcagttgt tgcaggaggt ctacggttac acggcgacct
    13741 gggcaggttt ggcctctgcg ccggtaggga ttattccggt gatcctgtcg ccgattatcg
    13801 gccgcttcgc gcataaactg gatatgcggc ggctggtaac cttcagcttt attatgtatg
    13861 ccgtctgctt ctactggcgt gcctatacat ttgaaccagg tatggatttt ggcgcgtcgg
    13921 cctggccgca gtttatccag gggtttgcgg tggcctgctt ctttatgccg ctgaccacca
    13981 ttacgctgtc tggtttgcca ccggaacgac tggcgacagc atcgagcctc tccaacttta
    14041 cgcgaacgct ggcggggtct atcggcacgt ccatcaccac caccatgtgg accaaccgcg
    14101 agtcgatgca ccatgcgcag ttgactgagt cggtaaaccc gtttaacccg aatgcccagg
    14161 cgatgtacag tcaactggaa gggcttggga tgacgcaaca gcaggcatca ggctggattg
    14221 cccagcagat caccaatcag gggctgatta tttccgccaa tgagatcttc tggatgtccg
    14281 ccgggatatt cctcgtcctg ctggggctgg tgtggtttgc taaaccgcca tttggcgcag
    14341 gtggcggcgg aggtggtgcg cactaagtac aactaagcca gttcatttga actggctttt
    14401 ttcaattaat tgtgaagata gtttactgac taaatgtgca gttcctgcaa cttctctttc
    14461 ggcagtgcca gttcttcgtt gctgttgatg cgtacgtcac gttccagaat gctacgcgca
    14521 atatcctgcg cttcctgcaa cgagtgcatc tggtaagtgc cacactggta gacgttcagt
    14581 tccgggatct gattctgatc ctgcactttc agcacgtctt ccattgccgc tttccaggca
    14641 tcagcaacac gctgctcatc tggcgtacca atcagactca tataaaaacc ggtgcggcag
    14701 cccattggcg agatatcgat aatctctaca ccattaccgt taagatggtt acgcataaaa
    14761 ccagcaaaca ggtgctccag ggtatggatc cctctttctg gcatcacttc tttgttcggc
    14821 acgcagaagc gcagatcgaa cacggtgatt gcgtcgccat gcggggtgtt cattgttttc
    14881 gccacccgaa ctgcaggcgc ttccatccgg gtatgatcga ctgtgaagct atctaacaac
    14941 ggcatttagc cacctccggt aattttttta aaaattttct gaactctttc ttcccaggcg
    15001 agtctgagta tatgaaagac gcgcatttgt tatcatcatc cctgaattca gagatgaaat
    15061 tttggccact cacgagtggc ctttttcttt tctgtcaggc gtgtttttcc agccacaccg
    15121 caaacggttc ggtatcagcg gtttccattt cctgctgacg gcattcagat gcctcgcgct
    15181 cggctacaaa atcctcttcg cgcagaattt ccagcggctc ttcacgcagc agattacggt
    15241 aggcttctgc aaacgctttg cctgttccgc caataccagt atcaatcata gaccttaaga
    15301 tacgggcaga gaaagtcaga tcgggattat cgaagcaggc aaccagttca tcacacactt
    15361 tctgatacgc ttcgccgccg ttaatgctat ccagcgtttg cgcgacgcgt ttcagatcgc
    15421 ggaacagatc tttacccacc tgcagtaacg ggaactgcgc ggtttcgcag ccgataccca
    15481 gcgtcaggcc cggtttgcga ccttcaagga tcacccggtt ccagttaacg cgcgtacagg
    15541 caagttcgct actgctcatt tccggtgcat cagccagcgc acaccagacc ataaacaggt
    15601 cgaggaatcg cacctgctgt tcatctacac caatcggcga gaacgggttg atgtccagcg
    15661 aacgcacttc aatatattca atgccgccac gtaacagcgc atcagaaggt gactcgccgc
    15721 tgcgggtaac gcgttttgga cgaatcggcg catacagttc gttttcaatc tgcagcacgt
    15781 tgctattgat ttgcagcctc ttaccgtctt tctcaatacc aatcttcgcg tactcttccg
    15841 atggcgtttt gattgcctgt ttaaggcccg ctacgtactc gtaaagatcg ttgaaggtaa
    15901 taccaagatt gctttgcgat ttattggtat agccgagatc gctcaaacga agagaggtcg
    15961 catacggcag gtaatacata ccgcactcgg ttttctcaaa cggcagcgac gttggttttc
    16021 cttgcaggaa agaagaacaa atcgccggag atgcaccaaa cagataagga atgacccaac
    16081 cgaaacgata gtaattgcgg ataacgcgga aatagcccgc agaaattttc tctttggcat
    16141 cagcgcccga gatatcaccg cacttcgctt gccagaatgc cattggcaaa gagaaattgt
    16201 agtgcacgcc ggaaatggtt tgcatcagcg cgccgtagcg atttttcagc ccttcacgat
    16261 acagcgtttt aaagcgtccg gtgttagaag tgccgtactg tgccaattcg atgtcctgac
    16321 cttctgcgat gtagcatggc atacttaacg gccacatccg ctcatcgccc atattgcgcg
    16381 ccgtataacg atgcagatcg cgcataaagg tcagcatatg ttcaatatca ccatccactg
    16441 gtgtaatgaa ttccagcaat gcttccgcaa aatcggtagt aatccatttg tgcgtcagtg
    16501 cggaacctaa tgcttcagga tgacctgttg ttgccagtgt gccatcagca ttaacacgca
    16561 aagtttcgcg ctccagccca cgctgtatcc cctttaacgc ctgaggatgt ttttccagcc
    16621 aggccagcgc ctgtgatacg tccgggatca aattgacctc ccgcctgtca aaatcgtttt
    16681 aattagcata actgtaatgg tgaccatatg tgcaggccta caattagtgc caccacatca
    16741 tgccctgaac ggtcgctgct gcaactgcaa catagcgtaa cgctttacca aggcacaaaa
    16801 aaaagattac tggcccccag gagatgcgca tccatcccgc taacagacac agtaaatcgc
    16861 caaccacggg catccagctt aataatagcg tgactgcacc atagcgtttc agccagccgg
    16921 tagctttctc ttgccagcgc gatgttttac gcaatggaaa gaaacgccca aggataacgt
    16981 tagttaaccc tccaaggcta ttacccattg ttgctgttaa aactaaaacc cagggatgac
    17041 tgatcccgga aagcaacatt gccaccagca cgacttcgga gttgccgggt aatagtgtag
    17101 cgctgagaaa actactggca aacaacgaga aaagcgataa cgcttcactc acagcaagcg
    17161 aacatccaca gcgtccatgc ctgctgcacg ggccgcctga ataccgaaat cggcatcttc
    17221 aaagaccaca cactgcgtcg gttgcacgcc catacgctgc gcgcacaaca aaaatgtgtc
    17281 tggcgcgggt ttatggtgtt tgacgtgatc agcagcgacg acagcgtcaa aataacggcg
    17341 taatcccagg tgcgccagca atgcctcagc gatggcgctt tcactccccg ttcctacagc
    17401 cattgggcga cgaccatgcc aacttttcac cacttcaaca agaggaagcg gctcgacact
    17461 atccagcagc atacttctta ctgcttctgt tttttcacgc gctaacgcat gcgggtcgag
    17521 atcggcctga ttcagctcaa taattgcctg agcaatacgc caggtgggcg atccattaag
    17581 cgcaatcatc gcctgaatat cgtactgaag accgtagtgc cctaatactt cgcgccacgc
    17641 tttacggtgc gtaggctccg tatccaggat tgtgccatcc atatcaaaaa ttaaacctgc
    17701 ataacgctcg tacatggtct tctcgcaagt cgaaaaacat gacgctactt tagcgtaatt
    17761 gcttgatttt gtcgctgatg gcgaaggaga agaaaattca ggaaatggat aaagtagtta
    17821 tttagaaatg agatattttt gaaggaaatt ttttggagaa gatggtgcat ccgggaggat
    17881 tcgaacctcc gaccgctcgg ttcgtagccg agtactctat ccagctaagc tacggatgca
    17941 tcgggaaaat ttattttact gctgatattg atatcgctac taaagccata tcaagtaaga
    18001 tatggtgcat ccgggaggat tcgaacctcc gaccgctcgg ttcgtagccg agtactctat
    18061 ccagctgagc tacggatgca tcgggaaact tactttactg cagatttttt gataccgcta
    18121 ctaaagccgt atcaagtaag atatggtgca tccgggagga ttcgaacctc cgaccgctcg
    18181 gttcgtagcc gagtactcta tccagctgag ctacggatgc aaatggcggt gaggcgggga
    18241 ttcgaacccc ggatgcagct tttgaccgca tactccctta gcaggggagc gccttcagcc
    18301 tctcggccac ctcaccacac gcctcttacg agtgcttcga agaacttgtt tatcgctcat
    18361 cgtcgctgca tggcgcacat attactttct gagacttata agtcaaacaa tttttcccac
    18421 acttttatcg tttgcacact tcacgctcaa ttagtctgta aaaacgtcaa aaagagtgtt
    18481 ttatctacag aaaaacggag gtctggcaga tagcagtaat gcaaaaaaat ggagacttaa
    18541 gttgaatgaa cgggagtaaa gcgaaaagac tatagagtga aggagaaatt ttgagggtgc
    18601 gtctcaccga taaagatgag acgcggaaag attagtaact ggactgctgg gatttttcag
    18661 cctggatacg ctggtagatc tcttcacggt gaacagaaac ttccttcggg gcatttacgc
    18721 caatacgtac ctggttgccc tttaccccta aaactgtcac ggtgacctca tccccaatca
    18781 tgagggtctc accaactcga cgagtcagaa tcagcattct ttgctccttg aaagattaaa
    18841 agagtcgggt ctctctgtat cccggcatta tccatcatat aacgccaaaa agtaagcaat
    18901 gacaaacaca ttacatgtaa gcagtcatgg cattacattc tgttaaacct aagtttagcc
    18961 gatatacaca acttcaacct gactttatcg ttgtcgatag cgttaatgcg aatgccgtga
    19021 agcgagtcca cggcattgcc tgacgcttat attattgcaa tttcgcgctg acccagcctt
    19081 tcacactggc taacgctgca ggtaaggccg cagcatccgt accaccggct tgcgccatgt
    19141 caggacgtcc accacccttg ccgcccacct gctgagcgac cataccaatc agttcccctg
    19201 ctttcacacg atctgtgacg tccttagata cgcctgcaat cagagaaacc ttaccttcgg
    19261 ctaccgttgc cagcacgata attgtcgacc ccagctgatt ttttaaatcg tcaaccatgg
    19321 tacgcaacat tttcggctca acaccgctaa gctcgctaac caacagctta acaccattaa
    19381 catcaattgc cttactggaa agatttgcgc tctcctgtgc ggcagcttgt tctttaagct
    19441 gttgtagttc tttttctaac tgacgcgtac gttccagtac tgagcgcact ttatccgcca
    19501 gattattgct atcgcctttc agcagatgcg cgacttcgct taagcgatcg ctgtctgcat
    19561 gaacggtggt gatagcgcct tctccggtta ccgcttcgat acgacgaacg cctgcagcag
    19621 tacccgattc agagatgatg cggaacagac caatatcacc agtgcggctg gcgtgagtac
    19681 cgccacacag ctcggtggag aaatcgccca tgctcagcac gcgtacgcgc tcatcatact
    19741 tctcgccgaa cagcgccatc gcacctttcg ctttcgccgc ttcgagatcc atgatgttgg
    19801 tttcgatcgg caaattgcga cgaatctgtg cgttcaccaa gtcttcgacc gcacgaatct
    19861 cttccggttt catcgcttcg ttgtgtgaga agtcgaagcg cagcactttg tcgttaacca
    19921 gtgaaccttt ctgcgataca tgagtaccca gaacctggcg cagcgcagcg tgcatcaggt
    19981 gcgttgcgga gtgattcaga cgaatacggg cgcgacgagc ctcatcaaca tcagcctgca
    20041 cagcgtcgcc cactttcaga gaacccgcag caagtttacc gatgtgacca atcgcctggc
    20101 cgtatttctg cgtatcttcc accacgaagg agaaattagc gcctttcagt tcgcctttat
    20161 caccaacctg accgccggat tccgcataga atggcgtttg atccagcacg accacagctt
    20221 cctggcctgc attgatggca tcaaccgctt taccatcaac aaacagcgcg gtcactttgc
    20281 cgttcagttc cagatggtca tagcctttaa attcagatgc actgtcaaca cggatcattg
    20341 cgttgtaatc ggcaccaaag ccgctggctt cgcgcgcccg acgacgctgc tcttccattg
    20401 ctgcttcaaa accagcttcg tcaactttga tgttgcgctc acgacaaaca tcagccgtca
    20461 ggtcaaccgg gaagccatag gtgtcgtaca gacggaaagc agtttcacca tccagcgtat
    20521 caccagaaag ttttgccagc tcttcatcca gcaacgccag accgcgctcc agagtacgag
    20581 caaactgctc ttcttcagtc ttcagcacct gctcaacctg cgcctgctgg cgtttcaggt
    20641 cttcacccgc agagcccata acgtcgatca gcggaccaac cagtttgtag aagaaggttt
    20701 ctttcgcgcc gagcatatta ccgtgacgca ctgcgcgacg aatgatacga cgcagtacat
    20761 aaccacggtt ttcattggac ggcattacgc catccgcgat caggaacgca caagaacgaa
    20821 tgtggtcagc gattacgcgc agcgatttat tgctcagatc ggttgcgcca gtgactttcg
    20881 ctaccgcctg gatcaacgtg cggaacaggt cgatgtcata gttagagtta acgtgttgca
    20941 gcaccgcagc aatacgctcc agacccatac cggtatctac agacggcttc ggcagcggtt
    21001 ccatcgtgcc atcggcctgg cggttgaact gcatgaagac gatgttccag atctcaatgt
    21061 agcggtcgcc gtcttcttcc ggacttcccg gagggccacc ccaaatgtgg tcgccgtgat
    21121 cgtagaagat ttcggtgcac gggccgcacg gaccagtgtc acccatctgc cagaagttgt
    21181 cagatgcgta tggcgcacct ttgttatcgc cgatgcgaat aatacgttcg cgcgggatcc
    21241 ctacttcttt ttcccagatt tcgtaggctt cgtcgtcgct ttcatagacg gtaacccaca
    21301 ggcgctcttt cggcagggca aaccattttt cgctggtcag cagttcccat gcaaactgaa
    21361 tggcatcgtg tttgaaatag tcgccgaagc tgaagttgcc cagcatttcg aagaaggtat
    21421 ggtgacgcgc ggtgtaaccg acgttttcca ggtcgttgtg tttaccaccc gcacgcacgc
    21481 agcgttggga agtggtagcg cgggaataat tacgcttgtc gagcccaagg aacacatcct
    21541 tgaactggtt catcccggcg ttggtaaaca acaaagttgg gtcgttatgg ggtaccaggg
    21601 agctgctggc aactacctga tgtcccttac tatggaaaaa gtcgagaaac gcctgacgga
    21661 tctcagcggt gctcttgctc ataattatcc tgaaatcaag ctaacgaaat atcgccacca
    21721 gctccagcgt gtcttaaccg ccgggctggt aactgaaaag tgggaataag ataagttttc
    21781 ttgactggga agtaaaatac cgtatgcgtt cagtcggcaa aatttcgcca aatatcctgg
    21841 atatcttcca tcagatagcc acgatagagc agaaaacgct ggatcttaac tttttctgaa
    21901 aagacagttg gcaaaggttc accatatttt cgcgtcgcct gatcgcgcgc cagtgcgcac
    21961 cagtcgatgt cacattcacg catcgctttt tctgtcgctt cgcgggaaat acctttctta
    22021 ttcagttcct ggcgaatacg cgcaggtcca taacctttgc ggctacggct ggcgataaag
    22081 cgcgcaacaa atcggctgtc atcgagatag ccatgttcat ggcaccaggc aataacgcgc
    22141 tcgtaatctt ctgccgtagc atcaatctct tccgggccat ttttgcccat aatcggtgcc
    22201 gcgagtttac gtcgcagttc ttgctcactg tgatcgcgca ccgccagaat gcgtaccgca
    22261 cgatccaaca ggcgagcata tgccgggcga cgggacgttg attctgtcat ggcatatcct
    22321 tacaacttaa aaaagcaaaa gggccgcaga tgcgacccag gttttgctga taaacagatt
    22381 taatagtcaa tgagtgtgca gccaattcgt tagaggatcg aggtgagagt aatttttcac
    22441 ggcagtgctg gcctgttccc ctcaccctaa ccctctcccc aaaggggcga ggggaccgtc
    22501 cgtgcacaca ttatctatta tcatcaataa cgaacgatta aaaatcttcg ttagtttctg
    22561 ctacgccttc gctatcatct acagagaaat ccggcgttga gttcgggttg ctcagcagca
    22621 actcacgtac tttcttctcg atctctttcg cagtttccgg gttatctttc agccaggcag
    22681 ttgcattcgc tttaccctga ccgatcttct cacctttgta gctgtaccac gcgcctgctt
    22741 tctcgatcag cttctctttt acgcccaggt caaccagttc gccgtagaag ttgatacctt
    22801 cgccgtagag gatctggaat tcagcctgtt taaacggcgc agcgattttg ttcttcacca
    22861 ctttcacgcg ggtttcgcta cccaccacgt tttcgccctc tttcaccgcg ccgatacgac
    22921 ggatgtcgag acgaacagag gcgtagaatt tcagcgcgtt accaccggta gtggtttccg
    22981 ggttaccgaa catcacacca attttcatac ggatctggtt gatgaagatc agcagcgtgt
    23041 tggactgctt caggttaccc gccagcttac gcatcgcctg gctcatcata cgtgccgcaa
    23101 ggcccatgtg agagtcgccg atttcacctt cgatttccgc tttcggcgtc agggccgcca
    23161 cggagtcaac gacgataacg tctactgcgc cagaacgcgc cagggcgtca cagatttcca
    23221 gtgcctgctc gccggtgtcc ggctgggagc acagcaggtt gtcgatatcg acgcccagtt
    23281 tacgtgcgta gattgggtcc agcgcgtgtt cagcatcgat aaacgcacag gttttacctt
    23341 cacgctgcgc tgcggcgatc acctgcagcg tcagcgtggt tttaccggaa gattccggtc
    23401 cgtagatttc gacgatacgc cccatcggca gaccacctgc cccaagcgcg atatccagtg
    23461 aaagcgaacc ggtagagatg gtttccacat ccatggaacg gtcttcaccc aggcgcatga
    23521 tggagccttt accaaattgt ttctcaatct ggcccagtgc tgccgccaac gctttctgtt
    23581 tgttttcgtc gatagccatt tttactcctg tcatgccggg taataccgga tagtcaatat
    23641 attctgttga agcaattata ctgtatactc atacagtatc aagtgttttg tagaaattgt
    23701 tgccacaagg tctgcaatgc atacgcagta gcctgacgac gcaccgcatc acggtcaccg
    23761 ctgaagcatt cccgccgggt aatgccttca ccgcgggcag tggcaaaagc aaaccagacg
    23821 gtgccgacag gcttctcttc actgccgcca tccggcccgg cgataccact aatagacacg
    23881 gcataatcag cacgagccgc tttcagtgca cctatcgcca tttccaccac gacgggttca
    23941 ctcaccgcgc catgctgcgc cagcgtctct tcacgtacgc agatcatctg cgctttggct
    24001 tcgttactgt aggtgacaaa tccgcgttca aaccaggcgg agctaccggc aatatcggta
    24061 atcactttcg ctacccaacc gccggtacaa gactcagcag ttgttacggt tgcgccacgg
    24121 gctttcagcg cctgcccaac ctgttcgctt aactgcatca gttcactgtc agtcatcaca
    24181 acctctgtca gtcataaatt tatgccggac aagatagcac tttcgtcagg aagatggtgt
    24241 tggcgttgca attttacgag gaggattcag aaaaaagctg attagccaga gggaagctca
    24301 cgcccccctc ttgcaaatag ttactgcacg cgcgccagcg ccacggcttg tcctaactgc
    24361 cagaccgcca ttgcgtaatg ggtgctgtgg ttataacggg taatggtgta gaagttcggc
    24421 agaccgtacc agtactggta accggtaccg acatccagac gcagcaggct ggcttgttga
    24481 tggttgccca gcggctgctg tggcgttaaa cctgccgcgg caagctgcga aatgctgtac
    24541 ctggttttga agccatttgg caagcctgga gcctgaccgt ttgccattac cgcgacctga
    24601 tcgcctttca cccagccgtg cgctttgaaa tagttcgcca cgctaccgat cgcatcaacc
    24661 gggtcccaca ggttgatatg cccgtcgccg ctgaaatcta ccgcatattg tttgtaagac
    24721 gacggcataa actgtccgta gcccatcgcc ccggcaaagg aacctttcag attgagcgga
    24781 tcgtcctgct cgtcgcgcgc catcagcagg aaggtttcca gctcgccaga gaaatactcc
    24841 gcgcggcgtg ggtagttaaa tgacagcgtt gccagcgcat cgaggatgcg agttttcccc
    24901 atcacgcgcc cccagcgggt ttcaacgccg ataatcccga cgataatttc cggcggtacg
    24961 ccatacacct gccacgcgcg attcaacgca tcttcatact gattccagaa aaccacaccg
    25021 ttctgcacgt tgtccggcgt aataaatttt ttgcgataac gcagccatgc gccgttcgga
    25081 cctgatggcg gtttcaccga tgtggttggt gcctggttat ccatcagccg cagtaccgaa
    25141 tccagacgct tcgcctggga gagaatttcc tgcaactgct gacgatcgaa accgtgtttg
    25201 ttcaccattt tgtcgatgaa ctgctgggca ttcgggttat tagcgaaatc gccgcccatc
    25261 tgcatcacat tgtgctgcgg ctcaagcagg aagccgccag acggcgttcc ggtggtcgtt
    25321 tcagtctcag taggttttgg cttgctgcta caggcggcaa gcaacacaaa aaggggaagc
    25381 aatgttacat aacgacgctt gaacatgagg ggtccattta acagattcaa ccaggggcaa
    25441 gtatggtaaa gcatcacgcc ccgcacaagg aagcggtagt cactgcccga tacggacttt
    25501 acataactca actcatcccc ctcgctatcc ttttattcaa actttcaaat caaaatattt
    25561 atctttcatt ttgatcaaaa taacactttt aaatctttca atctgattag attaggttgc
    25621 cgttttggta ataaaacaat aaatcctgaa ggagagaaca atgatagaaa ccattactca
    25681 tggtgcagag tggtttatcg ggctgttcca aaagggcgga gaggggttta ccgggatggt
    25741 gaccggcatt cttccgctgt tgattagcct gctggttatc atgaacgcac tgattaattt
    25801 tatcggtcag catcgtattg aacgttttgc tcaacgttgc gccggtaacc ctgtttcccg
    25861 ttacctgctg ctaccgtgca ttggtacgtt tgtcttttgc aatccgatga ccttaagcct
    25921 gggtcgcttt atgccggaaa agtacaaacc cagctattac gcggcggcct cttatagctg
    25981 tcactcaatg aatggcctct tcccccatat caaccctggc gaactgtttg tttatcttgg
    26041 cattgccagc ggtctgacaa cgctgaacct gccacttggc ccactggcgg tgagctatct
    26101 gctggttggt ctggtcacca acttctttcg cggctgggtg accgatctga ccaccgccat
    26161 ttttgagaaa aagatgggca ttcaacttga acaaaaagtt cacctggcag gagcaacatc
    26221 atgacgcata ttcggatcga aaaaggaacg ggtggctggg gcggcccact tgagctggaa
    26281 gccacgccgg gaaaaaaaat cgtctatatc accgccggta cccggcctgc gattgttgac
    26341 aaactggcac aacttactgg ctggcaggct atcgacggat ttaaagaagg tgaacccgcg
    26401 gaggcagaaa ttggcattgc ggtaatcgac tgtggcggca cattacgctg cggcatctat
    26461 ccgaaacggc gtattcccac cattaatatc cactcgacgg gcaagtccgg tccactggcg
    26521 cagtacattg tggaagatat ttatgtctct ggcgtaaaag aagaaaacat cactgtagta
    26581 ggtgatgcga caccacaacc ctctgtcgtg ggtcgtgact atgacaacaa taagaaaatc
    26641 accgaacaaa gcgatggtct actggcgaag gtgggaatgg ggatgggttc tgccgttgcg
    26701 gtgctgtttc agtctggtcg tgacaccatc gacactgtat taaaaaccat tctgccgttt
    26761 atggcgttcg tctcagcgct catcggcatc attatggctt ctggccttgg tgactggatt
    26821 gcccacggtc ttgctccgct ggcgagccat ccactgggtc tggtcatgct ggcgctcatc
    26881 tgctccttcc cgctgctttc acctttcctc ggcccaggcg cagttatcgc acaggttatc
    26941 ggcgtattga ttggcgtaca gattggtctc ggcaatattc cgccgcatct ggctttacct
    27001 gcactgtttg ccatcaacgc gcaggcggcc tgcgacttca tcccggtcgg tttgtcgctg
    27061 gcggaagctc gtcaggacac ggttcgcgtc ggtgtccctt ctgtactggt gagccgcttt
    27121 ttaaccggtg cgccgactgt actgatcgcc tggtttgtct ccggttttat ctatcaatag
    27181 aggctgaaac atgaccgtta tttatcagac caccatcacc cgcatcggcg cgagtgccac
    27241 tgacgccctc agcgaccaga tgctcatcac ctttcgtgaa ggcgcgcctg cggatctcga
    27301 agagtattgc ttcattcatt gccacggcga gttgaaaggt gaactccatc ctggtttgca
    27361 atttacgctc gggcagcatc gctatccggt gaccgccgtt ggcagcgtgg cggaagacaa
    27421 ccttcgcgaa ctgggtcatg tcaccctgcg cttcgatggt ttaaacgaag cggaatttcc
    27481 gggcactgtc catgtggcag gccctgtacc cgacgatatc gcgccgggat cggttttgaa
    27541 gtttgaatct gttaaggagt aaaaaatgaa tcaggttgcc gttgtcatcg gtggtgggca
    27601 aatcttaggc gcgttcctgt gccacggtct ggctgccgag gggtatcgcg tcgcggttgt
    27661 cgatattcag agcgacaaag ccgcaaatgt ggcacaagaa attaacgccg aatatggtga
    27721 aggaacagcg tatggttttg gtgctgacgc caccagcgag caaagcgtcc tggcgctctc
    27781 tcgtggggta gatgaaatct ttggtcgcgt ggatttgctg gtctacagcg ccggaatagc
    27841 aaaagcagcc tttatcagcg acttccagct cggcgatttt gaccgttcgc tacaggtgaa
    27901 tctggtgggt tatttcctgt gtgcccgtga attttctcgt ttgatgatcc gcgacgggat
    27961 tcagggtcgc attattcaga tcaactcgaa atccggcaaa gtgggcagca aacacaactc
    28021 tggctacagc gcagcgaaat ttggtggcgt cgggctgact caatcactgg cgctggatct
    28081 ggcggagtac ggcattacgg tgcattcact gatgctcggt aacctgctga aatcgcctat
    28141 gttccagtca ctgttgcccc aatacgcgac caagctgggt atcaaaccgg atcaagtcga
    28201 gcagtattac atcgacaaag taccgctcaa acgcggctgc gattatcagg atgtgctgaa
    28261 tatgctgctg ttctatgcca gtcctaaggc gtcgtactgc accggacagt cgatcaatgt
    28321 caccggcggt caggtgatgt tctaatcaac agcggagatc cgttaaggat ctccgtgaga
    28381 ctaatagaat gcctgatgcg ctacgctcat caggcataca ggacttccgc cactacatta
    28441 aggaaaagtt atggtatccg cactcatcac tgtcgccgtt atcgcctggt gtgcgcaact
    28501 ggccttaggc ggctggcaaa tttctcgttt taaccgtgcc ttcgacacac tatgccagca
    28561 agggcgggtt ggcgtgggcc gttccagcgg gcgctttaaa ccgcgggtcg tggtcgccat
    28621 cgcgctggac gatcagcagt gcatcgtcga caccttgttt atgaaaggac tgactgtctt
    28681 cgcccgaccg caaaaaattc ccgcaattac cggcatgcat gcgggtgatt tacagcccga
    28741 tgtgatcttt ccccatgatc cactatcaca gaatgctcta tcattggcgc ttaaactgaa
    28801 acgtggataa tttcgttgtg aatgttactt gcttgcgaag ttatcatttt gaaacctaaa
    28861 tcaggtaatc acgcccatga aacctcgtca gcgtcaggcc gccattctgg agtatctgca
    28921 aaagcagggt aaatgctcgg ttgaagaatt ggcgcaatac tttgacacca caggcacaac
    28981 cattcgcaaa gatctggtca ttctggaaca tgccggaacc gtcattcgta cttatggcgg
    29041 agtggtgttg aataaagagg aatccgatcc gcctatcgat cataaaacgc tcatcaacac
    29101 ccacaagaaa gagctgattg cagaagctgc cgttagtttt atccatgatg gcgattcgat
    29161 cattcttgat gctggcagta ccgttttgca gatggttccc ctgctctcgc gctttaataa
    29221 catcacggtg atgaccaaca gcctgcatat cgtcaatgcg ctatccgaac tggataacga
    29281 acaaactatc ctgatgccag gcggaacatt tcgcaaaaaa tcggcctcat ttcacgggca
    29341 actggcagag aatgccttcg agcatttcac cttcgataaa ttgtttatgg gcaccgacgg
    29401 catcgatctc aatgcgggcg taaccacgtt caacgaggtt tataccgtca gtaaggcaat
    29461 gtgcaatgcc gcgcgcgaag tgattttgat ggcggactca tcaaagtttg gccgtaaaag
    29521 ccccaacgta gtttgcagtc ttgaaagcgt cgataagcta attaccgacg caggtatcga
    29581 tccggcgttt cgtcaggcgc tggaagagaa agggatcgat gtgatcataa ccggagagag
    29641 caatgagtga agcactactg aacgcgggac gtcagacgtt aatgctggag ttgcaggaag
    29701 caagccgttt accggaacgt ctgggcgatg attttgttcg cgccgccaat atcatcctgc
    29761 actgcgaagg caaagtggtg gtttcgggaa ttggcaaatc gggccacatt ggtaagaaaa
    29821 tcgccgcaac acttgccagt accggcacac cggctttttt tgtccatccg gtagaagcac
    29881 tgcacggcga tctggggatg attgaaagcc gcgatgtgat gctgtttatc tcttactccg
    29941 gtggcgcgaa ggaactggat ctgattattc cgcgtctgga agataaatct atcgcgctgc
    30001 tggcgatgac cggcaaaccg acgtcaccgc tgggcctggc ggcgaaagcg gtgctggata
    30061 tctccgtaga acgcgaagcc tgcccgatgc accttgcgcc gacctccagc accgtcaata
    30121 ccctgatgat gggtgacgcg ctggcgatgg cggtcatgca ggcgcgcgga tttaatgaag
    30181 aagattttgc ccgctcccac ccagccgggg cactgggcgc tcgcttgctg aataaagtgc
    30241 atcatctgat gcgccgtgat gacgctatcc cgcaggtagc gttaaccgcc agcgtgatgg
    30301 atgcgatgct ggagctcagt cgcaccggtt tggggctggt tgcggtatgt gacgctcaac
    30361 aacaggtaca aggcgtcttt accgacggcg atttacgtcg ctggctggtt ggcggcggcg
    30421 cactcaccac gccagttaat gaagcgatga cgacaggcgg caccacatta caggcacaaa
    30481 gtcgcgccat cgacgccaaa gagatcctga tgaagcgcaa aatcactgcc gcaccggtgg
    30541 tggatgaaaa cggcaaactc accggcgcaa ttaacctgca ggatttctat caggccggga
    30601 ttatttaatc cttcaatccc agacgtttcg ccagccgatg caggttggcg acgtcggttt
    30661 ccagcatccg cgcgcaggca gcccagttgt gatgattttg tgccagtgcc tggcgaatag
    30721 tttcacgctg gaacgcttct gtcgcttcac gcaggttttg cttaacaacg ggcaccgccg
    30781 ccgcttctgg cggcggcaac gtcacctcag gaatagcaaa atgttgcgcc tcaagaatca
    30841 cttcatcgcc gttgcgggtg gctctcgcca gcactaccgc ccgatgaata gcatgttcca
    30901 gttcgcgcac gtttcccgga aaactgtagt gttgcagtaa atttcgcgcc ccggcactta
    30961 ataccacgcg ggagagcccc tgccgcaaac gacactgctc gcagaaatac cccgccagca
    31021 gaatgacatc atcgccccgc tcacgcagcg gcggcaccga aagtggaaac acgctcaggc
    31081 gatgaaacaa atcggcacga aatcgccctg ccagcacctc ttcgcgtaag tcgcggttag
    31141 tcgccgccag cacgcgcaca tcgccccgca aactgcggtc atcgccaacg cgctgaatat
    31201 cgccatactg caaccccctc agcagcttgg cctgcaatgc caacgacaac tcgccgatct
    31261 catccagaaa cagcgtgccg ttatccgcca tttcaaactt cccgctgcag ttactgatag
    31321 cgccagtaaa cgctcctttc acatgcccga acaactcact ttccgccaca ctttccggca
    31381 gtgcggcaca gttgagatag accagcggat tcaccgcccg tggcgaggct tcatgaatcg
    31441 ctttcgccac cagctcctta ccggttccag tctcaccgct gatcaggacg ttgagatcgg
    31501 acgccgccac aatctcaatc tcttttttca gttgcgtcat gcctggcgac agaccgatca
    31561 tctgcgtctg tttcaccgct tcaaacggcg tggcatcgcc tggcagcata ttctggcttt
    31621 ccagttgttc aatcagcaac gcattgctta acgctcctgc cgccagcgcg gcaatcagcc
    31681 gtaactcttc gtcgctgaaa acatcgaact gatcgggctg catcccgtcg agcgtcagtg
    31741 cgccgatcag gttttgtccg gcaaacaatg gcagaccaac gcaggcgtga accttcagac
    31801 tctcctgccc gggaatcaaa ccgtcatagg gatcgggcaa ttcgctgtct gcgggaaaac
    31861 gcaccacatc cccggcgcgg gcaatcgctt ccagccgtgg atgcccttcc agcgcaaagc
    31921 gtctaccgag tacatccttt gccagaccgt cgatggcaag cggaataaac tgccgcgaat
    31981 cgtaacgtag caacgcagac gcatcgcact ccagcacctg acgtagcgtg gtgatcaggc
    32041 gctgaaaacg atcctgatga ccaatcccac gctgcaattc gatggcgata ttcgccagca
    32101 catcaacgga aaaactcatc tttgcctcac tgtcaatttg actatagata ttgtcatatc
    32161 gaccatttga ttgatagtca ttttgactac tcattaatga gcatactttt atttatatag
    32221 taaaaacaat cagataaaaa actggcgcgc aatctgcaat tagcaagaca tctttttaga
    32281 acacgctgaa taaattgagg ttgctatgtc tattgtggtg aaaaataaca ttcattgggt
    32341 gggtcaacgt gactgggaag tacgagattt tcacggcacg gaatataaaa cgctgcgcgg
    32401 cagcagctac aacagctacc tcatccgcga agaaaaaaac gtgctgatcg acaccgtcga
    32461 ccataaattc agccgcgaat ttgtgcagaa cctgtgtaat gaaatcgatc tggcggatat
    32521 cgattacatc gtgattaacc atgcagaaga ggaccacgct ggggcgctga ccgaactgat
    32581 ggcacaaatt cccgatacgc cgatctactg tactgccaac gctatcgact cgataaatgg
    32641 tcatcaccat catccggagt ggaattttaa tgtggtgaaa actggcgaca cgctggatat
    32701 cggcaacggc aaacagctca tttttgtcga aacaccaatg ctgcactggc cggacagcat
    32761 gatgacttac ctgacaggcg acgcggtgct gttcagtaac gatgctttcg gtcagcacta
    32821 ctgcgacgag catctgttca acgatgaagt ggatcagacg gagcttttcg agcagtgcca
    32881 gcgttactac gccaatatcc tgacgccgtt cagccgcctg gtaacgccga aaattaccga
    32941 gatcctgggc tttaacttac cagtcgatat gatagcgacc tcccacggcg tggtctggcg
    33001 cgataacccg acgcaaattg tcgagctgta cctgaagtgg gccgctgatt atcaggaaga
    33061 cagaatcacc attttctacg acaccatgtc aaataacacc cgcatgatgg ctgacgctat
    33121 cgcccaggga attgcggaaa ccgccccac
//
LOCUS       DAJVTL010000037        32653 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.037, whole genome shotgun sequence.
ACCESSION   DAJVTL010000037 DAJVTL010000000
VERSION     DAJVTL010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32653
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.037"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..494
                     /gene="gstA"
                     /locus_tag="OQQ26_001644"
     CDS             <1..494
                     /gene="gstA"
                     /locus_tag="OQQ26_001644"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HCS1857130.1"
                     /translation="NGDDYFAVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQL
                     LAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEAL
                     KDEHWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAE
                     GLK"
     gene            complement(538..1398)
                     /gene="pdxY"
                     /locus_tag="OQQ26_001645"
     CDS             complement(538..1398)
                     /gene="pdxY"
                     /locus_tag="OQQ26_001645"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HCS1857131.1"
                     /translation="MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHT
                     QYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAA
                     NPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHPVNNV
                     EEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQP
                     VGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK
                     PEHYFSATKL"
     gene            complement(1460..2734)
                     /gene="tyrS"
                     /locus_tag="OQQ26_001646"
     CDS             complement(1460..2734)
                     /gene="tyrS"
                     /locus_tag="OQQ26_001646"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HCS1857132.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNREDQGISFTEFSYNLLQGYDFACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
                     DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
     gene            complement(2863..3519)
                     /gene="pdxH"
                     /locus_tag="OQQ26_001647"
     CDS             complement(2863..3519)
                     /gene="pdxH"
                     /locus_tag="OQQ26_001647"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HCS1857133.1"
                     /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
                     AKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
                     FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
                     "
     gene            complement(3578..3907)
                     /gene="mliC"
                     /locus_tag="OQQ26_001648"
     CDS             complement(3578..3907)
                     /gene="mliC"
                     /locus_tag="OQQ26_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
                     /protein_id="HCS1857134.1"
                     /translation="MTMKKLLIIILPVLLSGCSAFNQLVERMQTDTLEYQCDEKPLTV
                     KLNNPRQEVSFVYDNQLLHLKQGLSASGARYSDGIYVFWSKGEEATVYKRDRIVLNNC
                     QLQNPQR"
     gene            complement(4005..5114)
                     /gene="anmK"
                     /locus_tag="OQQ26_001649"
     CDS             complement(4005..5114)
                     /gene="anmK"
                     /locus_tag="OQQ26_001649"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HCS1857135.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
                     KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
                     HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT
                     ERRMVLNIGGIANLSLLIPGQPVCGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
                     VILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
                     IISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAF
                     AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANS"
     gene            5388..5855
                     /gene="slyB"
                     /locus_tag="OQQ26_001650"
     CDS             5388..5855
                     /gene="slyB"
                     /locus_tag="OQQ26_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HCS1857136.1"
                     /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
                     QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
     gene            complement(5902..6336)
                     /gene="slyA"
                     /locus_tag="OQQ26_001651"
     CDS             complement(5902..6336)
                     /gene="slyA"
                     /locus_tag="OQQ26_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416159.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HCS1857137.1"
                     /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP
                     PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE
                     MEAVINKTRAEILHGISAEELEQLITLIAKLEYNIIELQAKG"
     gene            6537..6773
                     /locus_tag="OQQ26_001652"
     CDS             6537..6773
                     /locus_tag="OQQ26_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HCS1857138.1"
                     /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
                     RGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW"
     gene            6776..7633
                     /locus_tag="OQQ26_001653"
     CDS             6776..7633
                     /locus_tag="OQQ26_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310380.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCS1857139.1"
                     /translation="MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQ
                     VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN
                     NEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRAPVSG
                     WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT
                     LQGHVSSIGRAIYDQSVESDSSLIPDVKPNVPSVRLAQRVPVRFALDKVPGDVTLVSG
                     TTCSIAVGQ"
     gene            7633..9645
                     /locus_tag="OQQ26_001654"
     CDS             7633..9645
                     /locus_tag="OQQ26_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HCS1857140.1"
                     /translation="MNASSWSLRNLPWFRATLAQWRYALRNTIAMCLALTVAYYLNLD
                     EPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSA
                     WLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMINITEASQLWDIAQARVCEVIVGI
                     LCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQPETTDAIRAAHEGVIGQIL
                     TMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISSLRRMLLNWPSPPGATREIL
                     EQLLTALASSQTDVYTVARIIAPLRPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRL
                     QSGVDDHARLPRTSGLARHTDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLA
                     AISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLAT
                     MQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLNDNLAKIVGVALAWLAFA
                     ILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARR
                     WLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRDNCISLLRGVMSERGVQQKSLAATL
                     EELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQGTLAS"
     gene            complement(9646..10167)
                     /gene="sodC"
                     /locus_tag="OQQ26_001655"
     CDS             complement(9646..10167)
                     /gene="sodC"
                     /locus_tag="OQQ26_001655"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HCS1857141.1"
                     /translation="MKRFSLAILALVVATGAQAVSEKVEMNLVTSQGVGQSIGSVTIT
                     ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE
                     GPEGAGHLGDLPALIVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPL
                     GGGGERYACGVIK"
     gene            complement(10248..11144)
                     /locus_tag="OQQ26_001656"
     CDS             complement(10248..11144)
                     /locus_tag="OQQ26_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HCS1857142.1"
                     /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD
                     RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
                     TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
                     NDDYFQPLRDELAVVAEELNASSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
                     TLKMTRQQWFRIRKAALGYDVP"
     gene            complement(11193..11432)
                     /locus_tag="OQQ26_001657"
     CDS             complement(11193..11432)
                     /locus_tag="OQQ26_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HCS1857143.1"
                     /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNNMSD
                     GEKQEVLRLCRQRLMRKLRANKPTSSDEPEQPSLF"
     gene            11535..12134
                     /gene="nemR"
                     /locus_tag="OQQ26_001658"
     CDS             11535..12134
                     /gene="nemR"
                     /locus_tag="OQQ26_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310384.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NemR"
                     /protein_id="HCS1857144.1"
                     /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKIAEVPKGS
                     FYHYFRSKEAFGVAMLERHYATYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT
                     ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIILLSQALENGRENHCLTFCGEPLQQA
                     QVLYALWLGANLQAKISRNSEPLENALAHVKTIIATPAV"
     gene            12171..13268
                     /gene="nemA"
                     /locus_tag="OQQ26_001659"
     CDS             12171..13268
                     /gene="nemA"
                     /locus_tag="OQQ26_001659"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-ethylmaleimide reductase"
                     /protein_id="HCS1857145.1"
                     /translation="MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMEE
                     YYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQL
                     WHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGI
                     VNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEV
                     VDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDW
                     AGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLV
                     ARLQRKAELNPQRAESFYGGGAEGYTDYPTL"
     gene            13349..13756
                     /gene="gloA"
                     /locus_tag="OQQ26_001660"
     CDS             13349..13756
                     /gene="gloA"
                     /locus_tag="OQQ26_001660"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HCS1857146.1"
                     /translation="MRLLHTMLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
                     VKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN"
     gene            13859..14506
                     /gene="rnt"
                     /locus_tag="OQQ26_001661"
     CDS             13859..14506
                     /gene="rnt"
                     /locus_tag="OQQ26_001661"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HCS1857147.1"
                     /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKV
                     VRKGIKASGCNRAIMVAHNANFDHSFMIAAAERASLKRNPFHPFATFDTAALAGLALG
                     QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
     gene            14599..16860
                     /locus_tag="OQQ26_001662"
     CDS             14599..16860
                     /locus_tag="OQQ26_001662"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HCS1857148.1"
                     /translation="MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARS
                     EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ
                     RNLQIPLQGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL
                     MLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVR
                     SASDVAAFLGGDRPVTVVNPPAMRHPQIRIIVPVANMDDVSSVASGTGEDSHAGREGS
                     IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE
                     STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG
                     AVDLVIQVATPLSVASGLQRIGRAGHQVGGISKGLFFPRTRRDLVDSAVIVECMFAGR
                     LENLTPPHNPLDVLAQQTVAAAAMEALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS
                     GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEQA
                     GSLRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG
                     NGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGS
                     RHLILERCRDEIGDWRIILHSSYGRRVHEPWALAIAGRIHALWGADASVVASDDGIVA
                     RIPDTDGKLSARR"
     gene            16842..19166
                     /locus_tag="OQQ26_001663"
     CDS             16842..19166
                     /locus_tag="OQQ26_001663"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001441976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HCS1857149.1"
                     /translation="MVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRA
                     SQLLEIAQGYPDFLVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPF
                     ATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEE
                     ELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEIASYLENLLTVKRIFP
                     AMISGQERLACMDDAARLRDALGVQLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTA
                     EQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRP
                     VAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLW
                     ESQILPARVRDYSPEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEA
                     DQANRSALQQAIVEVLADGGAWFAQQISQRIRDKISESVDPSALQEALWALVWQGVIT
                     SDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPLVSYNTPNLAGRWSLLQV
                     EPLNDTERMLALAENMLDRYSIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRF
                     VEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATL
                     VPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRF
                     TLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG"
     gene            complement(19217..19564)
                     /gene="grxD"
                     /locus_tag="OQQ26_001664"
     CDS             complement(19217..19564)
                     /gene="grxD"
                     /locus_tag="OQQ26_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin 4"
                     /protein_id="HCS1857150.1"
                     /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG
                     ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
                     TAAKYKSEEPDAE"
     gene            19899..20726
                     /gene="mepH"
                     /locus_tag="OQQ26_001665"
     CDS             19899..20726
                     /gene="mepH"
                     /locus_tag="OQQ26_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-endopeptidase MepH"
                     /protein_id="HCS1857151.1"
                     /translation="MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
                     DKKKSTATTKKTQKASQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNK
                     TASASFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPY
                     RWGGSSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFF
                     RTQGRGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
     gene            20854..21435
                     /gene="sodB"
                     /locus_tag="OQQ26_001666"
     CDS             20854..21435
                     /gene="sodB"
                     /locus_tag="OQQ26_001666"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HCS1857152.1"
                     /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
                     GTAFEDKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNTGGEPTGKVAEAIAASFG
                     SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
     gene            complement(21581..22756)
                     /locus_tag="OQQ26_001667"
     CDS             complement(21581..22756)
                     /locus_tag="OQQ26_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857153.1"
                     /translation="MKINYPLLALALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAA
                     GMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSR
                     ILTSLNHGAFFGLGSVVAASVVPKHKQASAVATTFMGLTLANIGGVPAATWLGETIGW
                     RMSFLATAGLGVISMVSLFFSLPKGGAGARPAVKKELAVLMRPQVLSALLTTVLGAGA
                     MFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLL
                     LLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIG
                     AFNLGNALGAAAGGAVISAGLGYSFVPVTGAIVAGLALLLVFMSARKQPETVCVANS"
     gene            complement(22922..23011)
                     /gene="ynhF"
                     /locus_tag="OQQ26_001668"
     CDS             complement(22922..23011)
                     /gene="ynhF"
                     /locus_tag="OQQ26_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein YnhF"
                     /protein_id="HCS1857154.1"
                     /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH"
     gene            23310..24335
                     /gene="purR"
                     /locus_tag="OQQ26_001669"
     CDS             23310..24335
                     /gene="purR"
                     /locus_tag="OQQ26_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HCS1857155.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID
                     NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ
                     GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN
                     VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG
                     PFRDYRR"
     gene            complement(24332..25264)
                     /locus_tag="OQQ26_001670"
     CDS             complement(24332..25264)
                     /locus_tag="OQQ26_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1857156.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
                     RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
                     MSPALTWLLEYLGDSETLNKEWLREPEETPATGD"
     gene            25377..26588
                     /locus_tag="OQQ26_001671"
     CDS             25377..26588
                     /locus_tag="OQQ26_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HCS1857157.1"
                     /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
                     ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
                     VQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQ
                     AIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
                     LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
                     LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEAGCQNH
                     GNAEVAHSESH"
     gene            26879..28027
                     /gene="cfa"
                     /locus_tag="OQQ26_001672"
     CDS             26879..28027
                     /gene="cfa"
                     /locus_tag="OQQ26_001672"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HCS1857158.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR
                     LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
                     EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTIL
                     LQDYRDLNDQFNRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
                     VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
                     IADNYSERFKRMFSYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
     gene            complement(28067..28708)
                     /gene="ribE"
                     /locus_tag="OQQ26_001673"
     CDS             complement(28067..28708)
                     /gene="ribE"
                     /locus_tag="OQQ26_001673"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HCS1857159.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDYMLDGLETGASVAH
                     NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
                     IMTTAEVAKILTSENNRQIWFKVQDSQLMKYIMYKGFIGIDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGKKKLGARVNIEIDPQTQTVVDTVERVLAARENAMNQPGTEA"
     gene            28923..30296
                     /gene="mdtK"
                     /locus_tag="OQQ26_001674"
     CDS             28923..30296
                     /gene="mdtK"
                     /locus_tag="OQQ26_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HCS1857160.1"
                     /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI
                     MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM
                     RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV
                     SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF
                     TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVI
                     ILQRASR"
     gene            complement(30337..31593)
                     /locus_tag="OQQ26_001675"
     CDS             complement(30337..31593)
                     /locus_tag="OQQ26_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
                     /protein_id="HCS1857161.1"
                     /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLIEGELIVEAGGRSENT
                     VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH
                     PEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
                     LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
                     DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
                     PVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTAKGDGVTFSVGNINL
                     NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD
                     ASRQTLCNALKLQPDEDGIGATLQPA"
     gene            31901..31977
                     /locus_tag="OQQ26_001676"
     tRNA            31901..31977
                     /locus_tag="OQQ26_001676"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:31935..31937,aa:Val,seq:gac)
     gene            31982..32058
                     /locus_tag="OQQ26_001677"
     tRNA            31982..32058
                     /locus_tag="OQQ26_001677"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32016..32018,aa:Val,seq:gac)
     gene            32166..32471
                     /locus_tag="OQQ26_001678"
     CDS             32166..32471
                     /locus_tag="OQQ26_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HCS1857162.1"
                     /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
                     EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
BASE COUNT         7745 a         8589 c         8156 g         8163 t
ORIGIN      
        1 aaaacggtga cgattacttt gccgttaacc ctaaggggca ggtgcctgca ttgctgctgg
       61 acgatggtac tttgctgacg gaaggcgttg cgattatgca gtatcttgcc gacagtgtcc
      121 ccgaccgcca gttgctggca ccggtaaaca gtatttcccg ctataaaacc atcgaatggc
      181 tgaattacat cgccaccgag ctgcataaag gtttcacacc tctgtttcgc ccagatacac
      241 cggaagagta caaaccgaca gttcgcgcgc agctggagaa gaagctgcaa tatgtgaacg
      301 aggcactgaa ggatgagcac tggatctgcg ggcaaagatt tacaattgct gatgcctatc
      361 tgtttacggt tctgcgctgg gcatacgcgg tgaaactgaa tctggaaggg ttagagcaca
      421 ttgcggcatt tatgcaacgt atggctgaac gtccggaagt acaagacgcg ctgtcagcgg
      481 aaggcttaaa gtaatagcca tcggcccaca ggtcgttgtg ggccgaaatg agatatttca
      541 gagctttgtt gcgctgaaat aatgttctgg tttggcaata cgatcctgag cagcaaccac
      601 ttgcagctca tattcctgca ttgctttggt ggtcaccatg atttcgtata ctgcagcggt
      661 cacatgttcc agggcctcct gcagcgttgc cccctgaagc agtttcacca gcagtaaacc
      721 actcgtcaca tcaccaacac ctaccggctg gcgcatacca aaatccacca gcggacggct
      781 gatatgccag gcttcatcgg cggtaaccag cagcatttca aaacggtcac ggctatagcc
      841 agcccgcgcc aggtgtttaa ccaacacaat ttgtggccct tgcgcaatga gttcacgcgc
      901 tgccagaacc gcttcttcga cgttatttac cggatgctca cagagtattt ccagctcaac
      961 cagattcggc gcaatgatat cgctggcagg caaaccgtgc cgcacatgaa actctgcgac
     1021 acccggtgca acgatacagc ctttttccgg atgacccatt accggatcgc aaaaatattt
     1081 cgcctgcgga ttcgcggctt tcacctgacg gacgataccg aggatatgtt caccctgctc
     1141 cgccgatccc agatagccac ttaacacggc atcacaggtg tgtaatttat caatggcggc
     1201 aatgccttgc acaatttcgg ttaaatggct gggcggcatc acgcagccag tccatttgcc
     1261 gtattgggtg tgattagaaa attgaacggt gttcagtggc cagacgttcg cgcccagacg
     1321 gcgcatcgga aactctgccg cactgttacc cgcatgacca taaacaacgt gagactggat
     1381 agcgagaata tttttcatca tgttccctgt ataaaaacca gggggagtga tttctcactc
     1441 cccctttcca cttaatgcat tatttccagc aaatcagaca gtaattcttt ttgccgcgac
     1501 gcagtaaggt aaaacgacca aacagacgat cttcttcttt aaagaagtat tcaggatcgg
     1561 actgtttttc accgttaatg gtgatggcat tggaggcgat agttttacgc gcctgaccac
     1621 gggaaggttg cagttcagaa tcgaccagcg cctgcatcag gtctgcgccc ttttccatct
     1681 caaccatcgg tacgccgtcc tgcgccagct gttcgaagtc cgcttcactc agcgcactca
     1741 aagaaccgct gaacaggcat tcggtaatac gttttgccgc ctgtaaacct tcttcaccgt
     1801 gaaccagacg agtcacctgc tccgccagta catactgggc gcgcggtgct ttaccgctgt
     1861 ttttatcttc ttcttccagg gcgttgatct cttcaatgct cataaaggtg aagaacttca
     1921 ggaagcggta aacgtcggca tccgcagtgt tgatccagaa ctggtagaat ttgtacgggc
     1981 tggttttctt cggatccaac cagactgcgc cgccttcagt tttaccaaat ttggtgccgt
     2041 ctgctttggt gatcagcggg acggtcaggc caaacacctg attctgatgc aggcgacggg
     2101 tcaggtcgat accagaagtg atgttacccc actggtcaga accaccaatt tgcagcacca
     2161 catcgtactg tttgttcaga caggcgaagt cataaccctg caacaggttg taggaaaact
     2221 cagtgaacga aatcccctga tcttcacggt tgagacgctg cttaaccgct tctttgttga
     2281 tcatctggtt aacggagaag tgtttgccaa tatcgcgcag gaaggtcagc acattcatat
     2341 tgccgaacca gtcatagttg ttcgccgcga tagcagagtt ttctccacag tcgaaatcga
     2401 ggaacggggc aacctgctta cggattttgt ccacccactc ctgaacagtt tcttcggtgt
     2461 tcagcttacg ctcggcagct ttgaagctcg ggtcgccaat cagacccgtc gcgccgccta
     2521 ccagcgcaac cggcttgtgg cccgcctgct ggaagcgttt caggcataac aatggaacaa
     2581 gatgccccaa atgcaagctg tcagcggtag gatcgaagcc gcaatagagc gcgatcgggc
     2641 cttgcgccag tcgctctgct aacgcttcct cgtccgtcac ctgggctacc agcccccgct
     2701 cttgcaattg tttaatcaag ttactgcttg ccatcaaaat ctccatgtat ataacgactg
     2761 cacctttgcc ggtacacgac ttttcgccag atgcgaaaga gacatagaat aaagtgccag
     2821 aatcaggagt accagcgatt aaagcaagat ttttgcatct tttcagggtg caagacgatc
     2881 aatcttccac gcatcatttt cacgctggta caaaaagcgg tcatgcaggc gatgctcacc
     2941 gccctgccag aactcaatct gttcaaggct gacgcgaaaa ccgccccaaa agctcggcaa
     3001 tggcacttcg ccctgttgaa acttctgctt cagctctagg aatttacttt caaggatacc
     3061 gcgggcagaa atgcgactgg actgcttcga aacccatgca ccaatctggc tatcacgcgg
     3121 gcggctatga aaatatttca tcacttcgag agtcgaaagt cgttctgctt taccgatcac
     3181 catcacctgg cgttcaaggg tatgccacgg gaacagcagg ctaacgcgcg gattattttc
     3241 aatttgatgt gctttacggc taccgaggtt ggtgtaaaac accatgcctt tttcgtcgta
     3301 atgtttgagt aaaacgatgc gctgataagg ctgaccatgt tcatccacgg tagcgaccac
     3361 catcgcggta gggtccgcca gtttggcttc acaagcctga gagagccaac gttcaaaaag
     3421 ggttaatgga tcggcgggaa gatcgcggcg gcgtaacccg cctttggtgt attcacggcg
     3481 cagatgcgcg atttgctgca attcgtcgtt atcagacatg gttttcttta cggattgtca
     3541 gtgggtgacg ctattgtgcg ccgcccctgg aaaaatctca acgctgtgga ttttgtaact
     3601 gacagttatt caagacgatg cggtcgcgtt tatagacagt cgcttcctca cctttcgacc
     3661 agaaaacata gatcccgtcg gagtaacgcg cgccagaggc tgaaaggccc tgtttgagat
     3721 gcagtagttg attatcgtaa acaaaactga cttcctggcg cggattattc agtttgaccg
     3781 tcaacggttt ttcatcacac tggtattcca gcgtatcggt ttgcattcgc tcaaccagtt
     3841 gattaaaggc gctacagccg gagagaagga ccggcaaaat gataattaac agttttttca
     3901 tagtcatatc ccgaagactt tcctggtccg gagggcaaat accctcctta atcttccaag
     3961 tgtaacggca gacacgataa gaaaaaattc agttaattct gatatcacga gttggcgggg
     4021 aaaatagccc ccagtaccgt ctcctggctt gcgccagtga cggaaggcag atttcctggt
     4081 aatcccgcca gcgtccgcca ggcaagccag gcgaaagcca atgcttccat gtcatcgcca
     4141 ctaatgccaa cggcatcggt ggtggtgact tctgtgcctg gcagtaatgc cgccagacgc
     4201 gccatgagta gcggattacg actacctcca ccacatacca tcaatcgttc gcagccaccg
     4261 ctcaacaaaa cttgttcaga aatgatcacg gcggtgagtt ctgccagtgt ggcctgaaca
     4321 tcacgaggat caacacccgg aaaatggcgt aaatggcgct ccagccagcc gtagttaaag
     4381 tattcgcgtc cggtgctttt cggtgcaggt tgcgagaaat atggatcgct gagcatattt
     4441 tgcagcagtg ggagaataac tttacccgcc cgtgcccact cggcatcttt atcgtaaggt
     4501 ttaccggcct gacgccagat ccaggcatcc atcagcatgt taccaggacc ggtatcgtag
     4561 ccgcaaaccg gctgcccagg aatgagcagt gacagattgg cgatgccgcc aatattgagc
     4621 accattcgtc gctcggttgg gtgagccagc aaggcatgat ggaacgcagg taccagcggt
     4681 gcgccttgtc ctcccaaggc aatatcgcga cggcgaaaat caccgacaac cgtaattccg
     4741 gtgcgtgcca caatttgatt gttatcgcca atctgtaaag tgtgtggtgc cacgcccgtc
     4801 ggttcatgcc agacggtttg accgtgacag ccgatcgcaa ctatatctct cgcctgcagg
     4861 ttttgttcct taagcaaggc attgaccgca tcagcaaaaa gtcgcccgag ttgagtatca
     4921 agctgtccaa actgcgaaag tgtaagctgc tggccctggc aaatatccag tacagcctgt
     4981 ttcagagaca ccgggatcgg ccagctcaag cttgccagct gtgcgacccg gtgttcatca
     5041 attgtcgcca acacaacatc aacaccatca aggctggtgc ctgacataac gccaataaag
     5101 cggcccgatt tcatagttca tcctttttca atctgacgtt tgcgcaccac tcaaacataa
     5161 acttttcgtg aataccatgc ggaatgacca atttttaccg ttggtagtaa aacattatct
     5221 tcaaatcaat aatcatcatg aatgttttgt ttataattgg ttgatcctac tttcattatg
     5281 atttgctcat atttggtaga acatgtaacc atggattcac atatgccata tactttgacc
     5341 atgagggatg cttgcgtggc gtttcatggt gaacaggaga tttttcagtg attaaacgcg
     5401 tattggttgt ttcaatggta ggtctgtctc ttgtcggttg tgttaataac gacaccctgt
     5461 caggggatgt ttataccgct tctgaagcga aacaagtaca gaatgtcagc tatggcacca
     5521 tcgttaacgt acgtccggta cagattcagg gcggtgatga ttccaacgtt atcggtgcaa
     5581 ttggcggtgc tgttcttggt ggtttcctgg gaaatactgt tggtggcgga accgggcgtt
     5641 ctctggctac tgcagcaggc gctgttgcag gtggcgtagc tggtcagggc gtacagagtg
     5701 caatgaacaa aacgcagggt gtcgagctgg aaattcgtaa agacgatggt aataccatca
     5761 tggtggtaca gaaacaaggc aacactcgtt tctctccggg ccaacgtgtc gtactggcca
     5821 gcaatggcag tcaggtgacc gtttctccgc gctaaataag tttgcgtgtg gtcaggttac
     5881 tgaccacacg cccccttcat ttcacccttt ggcctgtaac tcaatgatat tatactcgag
     5941 ttttgcgatg agcgtaatca gttgttccag ttcctctgcg gagatgccat gtaaaatttc
     6001 cgcgcgggtt ttgttaataa cagcttccat ttcgctgatc agtggctctg ccttttccgt
     6061 cagtttaata cgtttagccc gacgatcgct ggcacaagtt tgacgcgaaa ttaacccttt
     6121 ttcttccagt tggtccagag tacggaccag tgatggctgc tcgatgccaa tcgcttttgc
     6181 cagttgaatt tgcgactggt ctggaggtaa ctgatggata ttgtgtaacg taacccaatg
     6241 ggtttgtgtt aactccagcg gtttcaggcg atggtctatc agagcacgcc atatgcgcac
     6301 caaccgtgcc agatcagaac ctagtggcga ttccaatttc acctccttat aattagcttg
     6361 ctaagatatt atgcggcttt tagaatagtg tgcagcaatt gtattgctaa aacaaatgta
     6421 ttgctgcatt tggttaccgt cagacatatt tttcagaaat tgcgcgtaaa tttttcgcac
     6481 ttaaagaata tttattaatc taacgcaata tattcggtcg taaaggaatc tactttgtga
     6541 agtttatgct caatgcaaca ggattgccct tacaagatct ggtgttcggt gcgtccgtct
     6601 actttcctcc gtttttcaaa gccttcgcgt ttggattcgt catctggctt gtcgtacacc
     6661 gcctgcttcg tggctggatc tacgccggtg acatctggca tcccttgtta atggatttat
     6721 cgctgtttgc gatttgcgtt tgccttgctc tggcaatact gattgcgtgg taactatgtc
     6781 aattaaaaca attaagtatt tctcaacaat cattgtagcg gtagttgcag ttcttgccgg
     6841 atggtggctg tggaattatt acatgcaatc tccgtggaca cgcgacggga aaatacgcgc
     6901 agaacaggtt tctatcaccc cacaggtgtc gggacgtatt gttgagctga atataaaaga
     6961 caaccaactg gttaacgcgg gagatcttct gctcacgatc gataaaacgc cctttcagat
     7021 cgccgagctg aacgcacagg ctcagttggc gaaagcgcaa tctgacctcg ccaaagccaa
     7081 taacgaagcc aatcgtcgtc gtcatctctc acaaaatttt atttctgccg aagaactcga
     7141 taccgctaac ctcaatgtta aagcgatgca ggccagtgtt gatgccgcac aggccacgct
     7201 gaaacagaca caatggcaac tggcgcaaac ggaaattcgc gccccggtga gtggatgggt
     7261 gactaacctc actacccgca tcggcgatta cgctgacacc gggaaaccgc tttttgccct
     7321 tgtcgacagc cactcgtttt acgtcattgg ttattttgaa gaaaccaagt tgcgccatat
     7381 ccgcgaaggt gcaccagcac aaattaccct ctatagtgat aacaaaacgt tacagggtca
     7441 cgtttccagt atcggtcggg cgatttatga tcagagcgtt gaaagtgact caagccttat
     7501 tccggatgtg aaacctaacg tcccctcggt tcgtctcgcc caacgcgttc ccgtccgctt
     7561 tgcgctggat aaagtcccag gcgatgtcac gctggtgtcg ggcaccacct gtagcattgc
     7621 cgtaggtcaa taatgaacgc atcgtcatgg tccttgcgca atttgccctg gttcagggcc
     7681 acgctggcgc aatggcgtta tgcgttacgc aataccattg ccatgtgtct ggcgctgacg
     7741 gttgcctatt atttgaatct ggatgaaccc tattgggcga tgacctcggc tgcagtagtt
     7801 agttttccca ccgttggcgg tgtcatcagc aaaagcctcg gacgcatcgc tggcagttta
     7861 ctgggagcca ttgcggcact gcttcttgcc gggcatacgc tcaatgagcc gtggtttttt
     7921 ctattgagca tgtcggcgtg gcttggcttt tgtacctggg cctgtgcgca cttcacgaat
     7981 aacgtcgcgt atgcatttca actggcgggc tacacggctg ccatcatcgc ctttccgatg
     8041 attaatatta ctgaggccag ccagctatgg gatatcgctc aggcgcgtgt ttgcgaggtg
     8101 attgtcggta ttttgtgcgg cggcatgatg atgatgatcc tgccgagcag ttccgatgct
     8161 acagcccttt taaccgcatt gaaaaacatg cacgcccgac tacttgaaca tgccagttta
     8221 ctctggcagc ctgaaacaac cgatgccatt cgtgcagcac atgagggggt gattgggcag
     8281 atactgacca tgaatttgct gcgtatccag gctttctgga gccactatcg ttttcgccag
     8341 caaaacgcgc gccttaatgc gctactccac cagcaattac gtatgaccag cgtcatctcc
     8401 agcctgcgac gtatgttgct caactggccc tcaccgccag gtgccacacg agaaattctc
     8461 gaacagctgc tgacggcgct cgccagttcg caaactgatg tttacaccgt cgcacgtatt
     8521 atcgccccgc tacgcccgac caacgtcgcc gactaccggc acgtcgcctt ctggcagcga
     8581 ctacgttatt tttgccgcct ttatctgcaa agtagtcagg aattacatcg tctgcaaagc
     8641 ggtgtagatg atcatgccag actcccacgg acatccggcc tggctcgtca taccgataac
     8701 gccgaagcta tgtggagcgg gctgcgtaca ttttgtacgt tgatgatgat tggcgcatgg
     8761 agtattgctt cgcaatggga tgccggtgcc aatgcattaa cgctggcagc aattagctgc
     8821 gtactctact ccgccgtcgc agcaccgttt aagtcgttgt cactgctgat gcgcacgctg
     8881 gtgttacttt cgctattcag ctttgtggtc aaatttggtc tgatggtcca gattagcgat
     8941 ctgtggcaat ttttactgtt tctctttcca ctgctggcga caatgcagct tcttaaattg
     9001 cagatgccca aatttgccgc attgtggggg caactgattg tttttatggg ttcttttatc
     9061 gctgtcacta atcccccggt gtatgatttt gctgattttc ttaacgataa tctggcaaaa
     9121 atcgttggcg tcgcgttggc gtggttagcg ttcgccattc tgcgtccagg atcggatgct
     9181 cgcaaaagcc gccgccatat tcgcgcgctg cgccgagatt ttgtcgatca actaagccgc
     9241 catccaacac tgagtgaaag cgaatttgaa tcgctcactt atcatcacgt cagtcagttg
     9301 agtaacagcc aggatgcgct tgctcgccgt tggttattac gctggggtgt agtgctgctg
     9361 aactgttctc atgttgtctg gcaattgcgc gactgggaat cgcgttccga tccgttatcg
     9421 cgagtacggg ataactgtat ttcactgttg cgcggagtga tgagtgagcg tggcgttcag
     9481 caaaaatcac tggcggccac acttgaagaa ttacagcgga tttgcgacag ccttgcccgc
     9541 catcatcaac ctgccgcccg tgagctggcg gcaattgtct ggcggctgta ctgctcgctt
     9601 tcgcaacttg agcaagcacc accgcaaggt acgctggcct cttaattact taattacacc
     9661 acaggcatag cgttcaccgc caccgcccag cggtttaggt tgatcggaca tattatcgcc
     9721 gccaacgtgg accatcagtg ctttgtcttt gatttcatcc agtgatttca gacgaggcgc
     9781 aatgacggca tcggtagctt tgccgtcatt attgacgatc agtgcaggca gatcgcctaa
     9841 atgcccggca ccttctgggc cttcatgttt accggtattt tgtggatcaa gatgcccgcc
     9901 tgcggattcc gcggcgctgg ctttgccatc tttggtggct ggctggcagc ttcctttggc
     9961 atgaatatgg aagccatgtt caccgggggg taatgctttc agatcgggcg aaaactccag
    10021 acctttatcg gtttcagtaa tggtgacgct accaattgac tgcccaaccc cttgcgacgt
    10081 gacaaggttc atctcgactt tttcactgac agcttgtgcg ccggtcgcaa caaccagcgc
    10141 cagaatggcc agactaaaac gtttcatagg acctccgttc attgtgcatt cctgaataag
    10201 tgtaaaccag tgacacattt ttgaacggcg gctattccta aaagtgctta cggtacgtcg
    10261 taacccagtg ccgctttacg gatacgaaac cattgttgac gggtcatttt cagtgtttct
    10321 gcttcgaccg ctgcccgtac gcgctcaatt ttacctgaac cgataattgg cagcggctgc
    10381 gacggtaaac gtaataccca ggcgtaaacc acctgttcaa tcgagctcgc gtttaactcc
    10441 tctgccacca cagccagttc atcacgcagc ggctggaaat aatcatcatt aaacagacga
    10501 ccaccaccaa ggcaggacca cgccattgga cgtacacgca gttgttgcag ttggtcgagc
    10561 gtgccatcca gcagtaacgg ctgatgtacc ggggatattt ccacctgatt agtggcaagg
    10621 gtaaacggca ggcgtgattg caacagcgca aattgcgcag gtgtaaagtt cgatacacca
    10681 aaatgacgca ctttgccgct ctgatgcaga tgtttgaacg cgtccgccac ttcatcggca
    10741 tccattaacg gatccgggcg gtggattaac agcagatcca gatgatcggt cgcaagatta
    10801 attagcgact gttcggcgct cttaatgatg tgatcgcggt cagtgatgta atgaccaatg
    10861 acgttttctt cacgcgcggt cgtcgcgata ccgcatttac tgacgatttc catccgctca
    10921 cgcaggtgag gtgccagttt cagcgcctcg ccaaacgccg cttcgcactg atagccacca
    10981 taaatatcag catggtccac ggtggtcacg ccgagatcca gatgctcttc aataaaactg
    11041 accagctggc gggcggacat gttccagtcc atcaatcgcc agtagcccat cacaaaacgg
    11101 gaaaactccg ggccttgcgg cgcaatagta atacgctgaa ccataatcgc ttcctcttat
    11161 cagatatgag aggagtatac gcaagattat gctcaaaaga gtgatggttg ctccggttca
    11221 tctgatgacg ttggcttatt tgcgcgtaat ttacgcatca gccgttgccg acaaaggcgc
    11281 agcacctctt gtttttcgcc atcgctcata ttattccagt taaaacgctc gtcccggctt
    11341 cgaaaacagc cgcgacaaaa cccgcgttcg tcagactggc aaattccccg gcacgggctc
    11401 tggacgggaa agaactctaa ttgctccgcc acttcgccct cctcaaataa gattattacc
    11461 attattgaag ctgttaatgt ccaaagtagc aactttgctt gcactagacc gactggtcta
    11521 ctacactcca actcatgaac aaacacaccg aacatgatac tcgcgaacat ctcctggcga
    11581 cgggcgagca actttgcctg caacgtgggt tcaccgggat gggcctaagc gaattactaa
    11641 aaatcgctga agtgccgaaa gggtccttct atcactactt tcgctctaaa gaagcgtttg
    11701 gcgttgctat gcttgagcgc cattacgcca catatcacca gcgactgact gagttgctgc
    11761 aatccggcga aggtaactac cgcgaccgca tactggctta ttaccagcaa acactgaacc
    11821 agttttgcca acatggaaca atcagtggtt gcctgacagt aaaactctct gccgaagtgt
    11881 gcgatctgtc agaagatatg cgcagcgcga tggataaagg cgctcgcggc gtgatcattc
    11941 tgctctctca ggcgctggaa aatggccgtg agaaccactg tttaaccttt tgtggcgaac
    12001 cgctgcaaca ggcacaagtg ctttacgcac tatggctggg tgcgaatctg caggccaaaa
    12061 tttcgcgcaa ttccgagcca ctggaaaacg cgctggcaca tgtaaaaacc attattgcga
    12121 cgcctgccgt ttagcaggca ttttttatca ccagacgacc gggagccttt atgtcatctg
    12181 aaaaactgta ttccccactg aaagtgggcg caataactgc ggcaaaccgt atttttatgg
    12241 caccgctgac gcgtctgcgc agtattgaac cgggtgacat ccctaccccg ttgatggagg
    12301 aatactatcg ccaacgtgcc agtgccggtt tgattattag cgaagccacg caaatttctg
    12361 cccaggcaaa agggtatgct ggtgcacctg gcatccatag tccggaacaa attgccgcat
    12421 ggaaaaaaat taccgctggc gttcatgctg aaaatggtca tatggccgtc cagctgtggc
    12481 acaccggacg catttctcac gccagcctgc aacctggcgg tcaggcaccg gtagcgcctt
    12541 cagcacttag cgcgggaaca cgtacttctc tgcgcgatga aaatggtcag gcgatccgtg
    12601 ttgaaacatc catgccgcgt gcgcttgaac tggaagagat tccaggtatc gtcaatgatt
    12661 tccgtcaggc cattgctaac gcgcgtgaag ccggttttga tctggtagag ctccactctg
    12721 ctcacggtta tttgctgcat cagttccttt ccccttcttc aaaccatcgt accgatcagt
    12781 acggcggcag cgtggaaaat cgcgcacgtt tggtactgga agtggtcgat gccgggattg
    12841 aagaatgggg tgccgatcgc attggcattc gcgtttcgcc aatcggtact ttccagaaca
    12901 cggataacgg cccgaatgaa gaagccgatg cactgtatct gattgaacaa ctgggtaaac
    12961 gcggcattgc ttatctgcat atgtcagaac cagattgggc gggaggtgaa ccgtatactg
    13021 atgcgttccg cgaaaaagta cgcgcccgtt tccacggtcc gattatcggc gcaggtgcat
    13081 acacggtaga aaaagccgaa acgctgattg gcaaagggtt aattgatgcg gtggcatttg
    13141 gtcgtgactg gattgcgaac ccggatctgg tcgcccgctt gcagcgcaaa gctgagctta
    13201 acccacagcg tgccgaaagt ttctacggtg gcggcgcgga aggctatacc gattacccga
    13261 cgttgtaatc caacattgcg agcggcgtaa agccgccgct atactaaaac aacattttga
    13321 atctgttagc cattttgagg ataaaaagat gcgtcttctt cataccatgc tgcgcgttgg
    13381 cgatctgcaa cgctccatcg atttttatac caacgtgctg ggcatgaaac tgctgcgtac
    13441 cagcgaaaac ccggaataca aatactcact ggcgtttgtt ggctacggcc cggaaaccga
    13501 agaagcggtg attgaactga cctacaactg gggcgtggat aaatacgaac tcggcactgc
    13561 ttatggtcac atcgcgctta gcgtagataa cgccgctgaa gcgtgcgaaa aaatccgtca
    13621 aaacgggggt aacgtgaccc gtgaagcggg tccggtaaaa ggcggtacta cggttatcgc
    13681 gtttgtggaa gatccggacg gttacaaaat tgagttaatc gaagagaaag acgccggtcg
    13741 cggtctgggc aactaatctc ctgccgggcg tgaactcatc gcgcccgcat ctttactgca
    13801 tcgacaagta atatttgtca taatgcgcgc tgcaatttat ccgtattaag agaatcagat
    13861 gtccgataac gctcaactta ccggtctgtg cgaccgtttt cgtggttttt atcctgttgt
    13921 gatcgatgtt gaaacagccg gatttaacgc caaaaccgat gcgctgcttg agattgccgc
    13981 catcaccctg aaaatggatg aacaaggctg gctgatgccg gacaccacat tacatttcca
    14041 cgtcgaacca tttgtcggcg caaatttgca gccagaggcc ctcgccttca atggcattga
    14101 cccgaacgat cccgatcgcg gcgcggtcag cgaatacgag gcgctgcacg aaatttttaa
    14161 agttgtacgt aaaggtatta aagcgagcgg ctgtaaccgc gccattatgg tggcgcacaa
    14221 tgccaatttt gatcacagct ttatgatagc cgccgcagaa cgcgcctcgc tgaaacgtaa
    14281 cccgttccac cctttcgcca cttttgacac tgctgcactg gccgggctgg cactcggaca
    14341 aaccgtattg tcaaaggctt gccagaccgc tggcatggac ttcgacagca cccaggcgca
    14401 ctccgcgctg tacgacaccg aacgcactgc tgtgctgttt tgtgaaatcg tcaaccgctg
    14461 gaaacgtctg ggaggctggc cgctacctgc agccgaagag gtgtaatcga gtcgatgcct
    14521 gatgacatgc aatgattcag gcatctatag tgaggctatt ccacgcatca agcatgatat
    14581 tcacggggaa tagcgttaat ggcagataat ccagaccctt catcgctcct gccggacgtg
    14641 ttttcaccgg cgacccgcga ctggtttctt cgcgccttta aacagccgac cgctgtccag
    14701 tcgcaaacct ggcatgtggc ggcgcgaagc gaacatgcgc tggtgattgc accgaccggc
    14761 tccgggaaaa cgctggcagc atttctctac gccctcgatc ggctcttccg cgaaggcggc
    14821 gaagataccc gcgaggcgca taagcgtaaa acctcacgca tcctctatat ttcaccgata
    14881 aaagccttgg gcaccgacgt tcagcgcaac ttgcagatcc cattacaggg tattgccgat
    14941 gaacggcggc ggcgcggcga aacggaagtc aatcttcgcg tggggatccg tactggcgat
    15001 acgcctgcac aggaacgcag caaactcacc cgtaatccgc cggatattct gatcaccaca
    15061 cccgaatcac tctatctgat gctgacctcc cgcgcgcgcg aaacgctacg cggcgtcgaa
    15121 acggtaatta ttgatgaagt ccacgcggta gcaggcagta aacgtggtgc gcatctggcg
    15181 ttaagtctgg agcggctcga tgcgctgctc cacacctcag cacagcgaat tggcctttct
    15241 gccactgtgc gctcagccag cgatgtggca gcatttcttg gtggcgatcg cccggttacg
    15301 gtagtcaacc cgcccgcaat gcgccatccg cagatacgga ttatcgtacc ggtcgccaat
    15361 atggatgatg tctcatcggt cgccagcggc accggcgaag acagccatgc aggccgggaa
    15421 ggctccatct ggccatatat tgaaacgggt atccttgatg aagtgttgcg ccatcgctcg
    15481 accattgtct ttactaattc acgcgggctg gcagaaaaac tgacggcacg attaaatgag
    15541 ctttacgccg ctcgcttaca gcgttcccct tctatcgccg ttgatgcggc ccatttcgag
    15601 tcgacctccg gcgcaacctc taaccgtgta caaagtagcg acgtttttat tgcccgctca
    15661 caccacggct ccgtctctaa agaacaacga gcaatcaccg aacaggcgct gaaatcgggt
    15721 gaattacgct gcgtggtcgc aacctccagt ctcgaactgg ggattgatat gggcgcagtg
    15781 gatctggtga ttcaggtggc aacgccgctt tctgttgcca gtgggttaca acgcattggt
    15841 cgcgccggac accaggtagg tggtatctcc aaagggcttt ttttcccccg aacccggcgt
    15901 gacttagtcg attccgcagt cattgtagag tgtatgttcg caggcaggct ggaaaacctg
    15961 acacctccgc ataatccact cgacgtcctt gcgcagcaaa ccgttgccgc cgcggcgatg
    16021 gaggcattac aggtagacga atggtactcc cgcgtacgcc gtgccgcacc gtggaaagat
    16081 ctgccaagac gtgtttttga cgccacgctg gatatgcttt cagggcgcta tccctctggc
    16141 gatttttctg cttttcgccc caaactggtc tggaacaggg agaccgggat attgaccgcc
    16201 cgacctggcg ctcagctgtt ggcggttacc agcggtggca ccattccgga tcgtggcatg
    16261 tatagcgtgt tattacccga aggtgaagaa caggccggtt cgctgcgggt gggtgaactg
    16321 gatgaggaga tggtatatga gtcgcgggtg aacgacatta tcactctcgg cgctacctca
    16381 tggcggatcc agcaaatcac ccgcgatcag gtgattgtga ctcctgctcc gggtcgttct
    16441 gcccggctcc ccttctggcg tggtgaaggt aacggacgtc cggctgaatt aggcgagatg
    16501 atcggcgatt ttcttcattt gctggcggat ggagcgttct tttccgggac tattcccccg
    16561 tggctggcag aagaaaatac gatcgccaat attcagggat tgattgagga gcagcgcaac
    16621 gcgacgggca tcgttccggg tagtcgccat ctgatcctcg aacggtgccg tgatgaaatt
    16681 ggcgactggc gtattatttt gcactcttcc tatggaagac gggtgcatga accctgggcg
    16741 ctggcgattg ccgggcgaat acatgcgcta tggggcgctg acgcgtctgt ggtcgccagt
    16801 gatgacggca ttgttgcgcg cattcctgac actgatggta aattgtccgc gaggcggtag
    16861 gcagctcggc acttttcgcc gcccgttttc gcgaatgcgc cgcgcgggca ttattaatgc
    16921 cgggccgcac gccgggccat cgcaccccgc tttggcaaca acggctgcgc gccagtcagt
    16981 tgctggaaat cgctcaggga tatccggatt ttctggtcat tctcgaaacc ctacgcgaat
    17041 gtctgcaaga tgtttatgat cttcctgcac tggaacgttt gatgcgtcgc ctgaacggtg
    17101 gcgaaattca aatatccgat gtaacgacca ctactccctc gcctttcgcc acaagtttat
    17161 tgttcggcta tgtcgcggaa tttatgtacc aaagcgacgc cccgctggca gagcgccggg
    17221 catccgtact gtcgctggac agcgagttac tgcgcaatct actcggacag gtcgatccgg
    17281 gggaattact cgacccgcag gtcattcgcc aggtggaaga agagttgcaa cgactggctc
    17341 ctggcagaag agcgaaaggt gaagaaggat tgttcgacct gctgcgcgaa ctggggccaa
    17401 tgaccgttga agacctggcg caacggcata caggcagcag tgaagagatt gcgtcgtatc
    17461 tggaaaatct tcttacagta aaacgaatct tcccggcgat gattagcgga caggagcgtc
    17521 ttgcctgtat ggatgatgcc gccaggctgc gcgatgccct cggcgtacaa ctaccagagt
    17581 ctctgccaga gatttatttg catagagtca gttacccgct tcgcgacctc tttctacgct
    17641 atctccgggc tcatgctctg gtcacggctg aacaactggc tcatgagttt agtctcggta
    17701 ttgccattgt cgaagagcag cttcagcaac tgcgcgaaca gggtctggtg atgaatctgc
    17761 aacaagacat ctgggtgagc gatgaagtat ttcgtcgtct gcgtttgcgc tcgctgcaag
    17821 ccgccagaga agcgacgcgt cccgttgcag ccacgaccta tgcgcgattg ctgctggaac
    17881 gtcagggcgt attacccgcc accgatggta gcccggcgct ctttgcctca acatcgccag
    17941 gcgtttatga gggcgtggat ggcgtgatgc gggtgatcga acagcttgcc ggagtcggtt
    18001 tacccgcctc actctgggaa agccagatcc tgcctgcccg cgtacgcgac tattcgccag
    18061 aaatgctcga tgaattactg gcaaccggtg cggttatctg gtcggggcaa aaaaaactgg
    18121 gtgaagatga cggcctggtg gcactgcatc tacaggaata tgctgcagaa tcgttcactc
    18181 ccgccgaagc ggatcaggcg aatcgttcgg cgctgcagca agcgatagtc gaggttctgg
    18241 ctgacggagg agcctggttt gcacaacaaa tcagccaacg gatacgtgat aaaatcagcg
    18301 aatcggttga tccctcggca ctgcaagagg cgttatgggc gctggtctgg caaggcgtca
    18361 tcaccagcga tatttgggca ccgttacgcg ccctcacccg cagcagttcc aacgcacgca
    18421 cctcaactcg ccgcagtcac cgggctcgtc gtgggcgtcc tgtctatgca caacccgtct
    18481 cgccgctggt atcttacaac acaccaaatc tggctggacg ctggtcgtta ttgcaggtgg
    18541 agccactaaa cgataccgaa aggatgctgg cgctggcgga aaatatgctc gaccgctaca
    18601 gcatcatcag tcgtcaggcg gtgatagccg aaaatatccc tggcgggttt ccatcgatgc
    18661 aaacgctttg tcgaagtatg gaagactccg ggcgaattat gcgaggtcgt tttgtagaag
    18721 gtctgggtgg cgcgcaattc gctgaacgtc tgactattga ccgattacgc gatctggcga
    18781 cacaagccac gcaaacgcgc cactatacac cagtggcgct ctctgccaac gatccggcta
    18841 atgtgtgggg aaatcttctg ccctggcctg cacatccggc aacgctggtt ccaacgcgtc
    18901 gggcgggtgc gctggtggtc gtttctggcg gcaaattgtt actctatctg gcgcaaggtg
    18961 gcaaaaaaat gctggtctgg caggaaaaag aggaattact cgccccagag gttttccacg
    19021 cgctgactac cgcactgcgt cgcgaaccac ggctgcgctt tacgctaaca gaagtgaatg
    19081 atctaccggt ccggcaaacg ccgatgttta cgctactgcg tgaggcggga ttttcaagtt
    19141 cgccacaagg gctggattgg ggatagataa aggactgacg gatgcccgtt cgcatccgtc
    19201 agtattgcag gacggattat tccgcgtccg gctcttcaga cttgtattta gcggcagttt
    19261 ctttgatcag ctgctgcagt tcgccacgct gatacatttc gatcacgata tcacaaccgc
    19321 cgaccagctc gccgtcaacc cacagttgcg ggaaggtcgg ccagttagca tatttcggca
    19381 gttccgcacg aatgtccgga ttctgcaaaa tatcaacata ggcaaaacgt tcgccacatg
    19441 cggcaagcgc ctggactgcc tgggcagaga aaccgcagct cggcagtttc ggtgaacctt
    19501 tcatgtacag caggatcggg ttttcagcaa tctggcgttg gattttttcg atagtggtgc
    19561 tcattgtctt gcttcctcaa acttctttac ggcagtaatc tgacattgta gcgggtcagt
    19621 gcggcatcgg aaaataacat tttcatcacg cttttgctat tttatccctt tgctctattt
    19681 gttgcatttc aaatattcgt ttcttctctg atgcgcggca atctggcgta tttataacca
    19741 tttttagctt tcactgctgc atttttttgc gctcgccaac gaaacgtatt ttttaacaat
    19801 aaaagctatt aactttctct tcttctatgc attagaatca tcaagttttg taaatcagac
    19861 gcaggcatga tagacctgcc ttaacagagg gacgctcagt ggcgcggata aaccgtattt
    19921 cgatcacgct ctgtgcttta ctttttacca ccctgccttt aacgcctatg gcccatgctt
    19981 caaagcaagc cagggagagt tctgctacca ctcatatcac caaaaaagca gataaaaaga
    20041 aaagcacggc aaccaccaaa aagacccaga aagccagcca gaaaacagcg aaaaaagccg
    20101 ccagtaaaag tacgaccaaa agcaaaaccg cttcttccgt taaaaaatct tccattaccg
    20161 cttctaaaaa cgccaaaact cgcagcaaac acgccgtcaa taaaacggcc tcagccagct
    20221 ttaccgaaaa gtgtaccaaa cgtaagggct ataaatcgca ttgtgtgaaa gtcaaaaatg
    20281 ccgcgtcagg aacccttgcc gacgcgcaca aagcgaaggt gcaaaaagcc acgaaagtgg
    20341 caatgaataa actgatgcag caaattggta agccatatcg ttggggcggc agctcaccgc
    20401 gtaccggttt tgattgcagc ggcctagttt attacgctta taaagatttg gtgaaaattc
    20461 gtattccgcg tacggcgaat gaaatgtatc acctgcgtga tgcagcgcca atcgaacgta
    20521 gtgaactgaa aaacggcgac ctggtctttt tccgtactca gggacgcggt acagccgatc
    20581 atgtcggcgt gtatgtcggc aacggcaaat ttattcagtc accgcgcacg ggccaagaaa
    20641 ttcaaatcac ttctctcagt gaagactact ggcagcgcca ctatgttggc gctcgtcggg
    20701 taatgacccc aaaaacactt cgctaaaact ttaccctgtt gttacggcaa cagggtaagt
    20761 tcatcttttg tctcaccttt taatttgcta ccctatccat acgcacaata aggctattgt
    20821 acgtatgcaa attaataata aaggagagta gcaatgtcat tcgaattacc tgcactacca
    20881 tatgctaaag atgctctggc accgcatatt tctgcggaaa ccatcgagta tcactacggc
    20941 aagcatcatc agacttatgt cactaacctg aacaacctga tcaaaggtac cgcgtttgaa
    21001 gataaatcac tggaagagat tattcgcagc tctgaaggtg gcgtattcaa caacgcagct
    21061 caggtctgga accatacttt ctactggaac tgcctggcac cgaacaccgg tggcgaaccg
    21121 actggaaaag tcgctgaagc tatcgccgca tcttttggca gctttgccga tttcaaagct
    21181 cagtttactg atgcagcgat caaaaacttt ggttctggct ggacctggct ggtgaaaaac
    21241 agcgatggca aactggctat cgtttcaacc tctaacgcgg gtactccgct gaccaccgat
    21301 gcgactccgc tgctgaccgt tgatgtctgg gaacacgctt attacatcga ctatcgcaat
    21361 gcacgtcctg gctatcttga gcacttctgg gcgctggtga actgggaatt cgtagcgaaa
    21421 aatctcgctg cataataact gatggcaaat gcagcattgc ctgatgcgct tcgcttacca
    21481 tgccaacgcg gatgaggcgt taacagcgca ttcggcaaga taaatcgcac gttgtcagca
    21541 actgtaacgc agaaggttat ccttctgcgt ttttgtttaa ttagctgtta gcaacgcaaa
    21601 ctgtttcagg ttgttttctg gctgacataa acaccagcaa taatgccagt cccgcgacaa
    21661 tcgcccccgt caccggcaca aagctgtatc ctagcccagc ggaaattacc gcaccaccag
    21721 cagctgctcc cagcgcattt ccaagattaa aggcaccaat attgactgat gaagacagac
    21781 ctggcgcttc actggcgaca cgcatcacgc gcatctgtaa cggcggtacg accgcaaagg
    21841 ttgctgcgcc ccacaccacc atgctaatag ctgcgccgaa ctcattgcgg gccaggaacg
    21901 ggattgccag cataatcacc atcagcagca acaaaaagcc tttcaacgtg ccgttaactg
    21961 aacgatctgc cagtttgccg ccgagatagt taccgataga gaatccgaca ccaatcagca
    22021 ccagcattgc cgtgacgaac accggtgttg cgtgggtaat actttgcagt accggagaga
    22081 tataggtgta gagggtaaac attgcaccag ctcccagtac cgtcgtcagc aatgcagaca
    22141 gcacctgcgg acgcattaat accgccagct cttttttcac tgcaggtcgt gcccctgcac
    22201 cacctttagg taatgagaag aacagactta ccattgaaat cactcccagc cccgccgttg
    22261 ccagaaatga catccgccag ccgatggttt cacccaacca ggtcgccgcc ggcacgcctc
    22321 cgatatttgc cagggttaac cccataaacg tagtggcaac tgcgctggcc tgtttatgtt
    22381 ttggcaccac gcttgcggcc acgactgaac ccaaaccaaa aaatgctccg tgattcaggc
    22441 tggtcaaaat gcgtgaaagc atcagggtca tataatccgg cgcgatggcg gaaagtacgt
    22501 tgccgagcgt gaaaattgcc atcaggaaaa tcaacgcact gcggcgggca cgatgagaaa
    22561 gtagaagcgt catcagcggc gcgcccacca ttacgccaac tgcataggcg ctgattaaca
    22621 ttccggcagc gggaatcgag acatccacac cgcgcgcaat gacgggcaac aagcccattg
    22681 gcgagaactc cgttgtcccg ataccaaacg cgccaatcgc cagcgccagc gccagcaacg
    22741 gatagttaat tttcatgcct tatctccacc tcttcgcgtc attacgcgat attcattaaa
    22801 gtggcgaaag catgacagca atcacaaaaa aatgaaaata acaaaaagag aaaacacttt
    22861 tgccattttg ctaacaaaca ggaaggagat gcgagggaga acgcgctccc tcgagaggaa
    22921 atcagtgcag cgcggcagtc aaacccacgg ctacgatcaa accgaggacg ataatcgttg
    22981 ttaccagtga aaatttaagg tcggtgctca tcaagttttc tcctttttta ttaccacaca
    23041 aaaagtgata ttacgcattt ttacacactg tgatgaaaaa atctcccgtc atttataatg
    23101 ataagtgttt ttaccacttc cccttttcgt caagatcggc caaaattcca cgcttacact
    23161 atttgcgtac aggccattga ccccttcctg acgctccgtg tcgtttttcc ggcgtaccgc
    23221 aacacttttg ttgtgcgtaa ggtgtgtaaa ggcaaacgtt taccttgcga ttttgcagga
    23281 gctgaagtta gggtctggag tgaaatggaa tggcaacaat aaaagatgta gcgaaacgag
    23341 caaacgtttc cactacaact gtgtcacacg tgatcaacaa aacacgtttc gtcgctgaag
    23401 aaacgcgcaa cgccgtgtgg gcagcgatta aagaattaca ctactcccct agcgcggtgg
    23461 cgcgtagcct gaaggttaac cacaccaagt ctatcggttt gctggcgacc agcagcgaag
    23521 cggcctattt tgccgagatc attgaagcag ttgaaaaaaa ttgcttccag aaaggttaca
    23581 ccctgattct gggtaatgcg tggaacaatc ttgagaaaca gcgggcttat ctgtcgatga
    23641 tggcgcaaaa acgcgtcgat ggtctgctgg tgatgtgttc tgagtaccca gagccgttgc
    23701 tggcgatgct ggaagagtat cgccatatcc caatggtggt gatggactgg ggtgaagcaa
    23761 aagctgactt caccgatgcg gtcattgata acgcgttcga aggcggctac atggccgggc
    23821 gttatctgat tgaacgcggt caccgcgaaa tcggcgtcat ccccggcccg ctggaacgta
    23881 acaccggcgc aggccgcctt gccggtttta tgaaggcgat ggaagaagcg atgatcaagg
    23941 tgccggaaag ctggattgtg cagggtgact ttgaacctga atccggttat cgcgccatgc
    24001 agcaaatcct gtcgcagccg catcgcccta ctgccgtctt ctgtggtggc gatatcatgg
    24061 caatgggcgc actttgtgct gctgatgaaa tgggcctgcg cgtcccgcag gatgtttcgc
    24121 tgatcggtta tgataacgtg cgcaacgcgc gctattttac gccggcgctg accacgatcc
    24181 atcagccaaa agattcgctg ggtgaaacag cgttcaacat gctgttggat cgtatcgtca
    24241 acaaacgtga agaaccgcag tccattgaag tgcatccgcg cttgattgaa cgccgctccg
    24301 tggctgacgg cccgttccgc gactatcgtc gttaatcacc cgttgcggga gtctcttccg
    24361 gctcccgcag ccactcctta ttcagcgtct cactatcgcc gagatactca agcaaccagg
    24421 ttaacgcagg cgacatatca ttttgctgcc atgtcagaca acatgccgaa tccggaaagg
    24481 ggttttccag ttctaatgct acccacttcc cctcattaag ccacggtttg gcgaaatgtg
    24541 ttggcaccat ccctatgcat aatcctgccg agatacaggt tgccgatgat tcccagtcag
    24601 gcacgacaac tcttttttgg ttatccagca accaggtaat acgtttaggt agcgttcgcg
    24661 aggtgtcttc gcgcaccaac gacggccagt tgcgcaacgt atcatcgctg aacgggccat
    24721 ccatcaacgc cagcgggtgg tgactggcaa caacgcaact ccagcttagc atccccatat
    24781 cccggaaggc ataacgaccg cctaccggaa tcgcgcgtgt tgcgccaatc gccagttcca
    24841 cgcgcccgtc ggaaagcgca tcccagacac cgttgaacac ttcctgaaag acaagaagtt
    24901 cgacatcatc aaaatggcga taaaaatcaa cgatcatctg ccgtgtacgt tctggcctga
    24961 caatattatc cactgcgata gctaactgac cgcgccagcc gttcgctatc tgctgacatt
    25021 gctggcgggt gatctgcatt tttttgacaa cagagcgccc ttctttgaga aaccacgctc
    25081 cagcagcggt cagctccaca tcacggtgcc gtcgttcaaa gagcggcacc gccagccact
    25141 cttccagctg acgcacggta tagctgaccg cagaaggaac gcgatgcagc tcctgtgccg
    25201 cagcgctaaa actaccatta cgcgctaccg catcaacaac ttcgagtgaa tattctgacc
    25261 acatagtctg cctgcaaaat ttttgaaatc agtcatcaaa tattaccgtt tcacaacact
    25321 aatttcactc cctacacttt gcggcggtgt tttattgaga gatttagaga atatacatgc
    25381 aacctgggaa aagattttta gtctggctgg cgggtttgag cgtactcggt tttctggcaa
    25441 ccgatatgta tctgcctgct ttcgccgcca tacaggccga cctgcaaacg cctgcgtctg
    25501 ctgtcagtgc cagccttagt ctgttccttg ccggttttgc cgcagcccag cttctgtggg
    25561 ggccactctc cgaccgttat ggtcgtaaac cggtgttatt aatcggcctg acaatttttg
    25621 cgttaggtag tctggggatg ctgtgggtag aaaacgccgc cacgctgctg gtattgcgtt
    25681 ttgtacaggc tgtgggggtc tgcgccgcgg cggttatctg gcaagcatta gtgacagatt
    25741 attatccttc acagaaagtc aaccgtattt ttgcgaccat catgccgctg gtgggtctgt
    25801 ctccggcact ggctcccctg ttaggaagct ggctgctggt ccatttttcc tggcaggcga
    25861 ttttcgccac cctgtttgcc attaccgtgg tgctaattct gcctattttc tggctcaaac
    25921 ccacgacgaa ggcccgtaac aatagtcagg atggtctgac ctttaccgac ctgctacgtt
    25981 ctaaaaccta tcgcggcaac gtgctgatat acgcagcctg ttcagccagt ttttttgcat
    26041 ggctgaccgg ttcaccgttc atccttagtg aaatgggcta cagcccggca gttattggtt
    26101 taagttatgt cccgcaaact atcgcgtttc tgattggtgg ttatggctgt cgcgccgcac
    26161 tgcagaaatg gcaaggcaag cagttattac cgtggttgct ggtgctgttt gctgtcagcg
    26221 tcattgcgac ctgggctgca ggcttcatta gccatgtgtc gctggtcgaa atcctgatcc
    26281 cattctgtgt gatggcgatt gccaatggcg cgatctaccc tattgttgtc gcccaggcgc
    26341 tgcgtccctt cccacacgca actggtcgcg ccgcagcttt gcagaacact ctacaactgg
    26401 gtctgtgctt cctcgcaagt ctggtagttt cctggcttat tagtatcagc acgccattgc
    26461 tcaccaccac cagcgtgatg ttatcaacag tagtgctggt cgcgctgggt tacatgatgc
    26521 aacgttgtga agaagctggc tgccagaatc atggcaatgc cgaagtcgct catagcgaat
    26581 cacactgatc tatatcgata tacttatact taggctgcta acaaaatttt gttgtatgat
    26641 tgaaattagc ggcctatact aatttcgagt tgttaaagct acgataaata ttatgttttt
    26701 acggggacag gatcgttccc gactcactat ggatggtcat ttcggcaagg gttcctcctt
    26761 tccctctgtt ctacgtcgga ttatagactc gcggtttttt ctgcgagatt tctcacaaag
    26821 cccaaaaagc gtctacgctg ttttaaggtt ctgatcaccg accagtgatg gagaaactat
    26881 gagttcatcg tgtatagaag aagtcagtgt accggatgac aactggtacc gtatcgccaa
    26941 cgaattactt agccgtgccg gtatagccat taacggttct gccccggcgg atattcgtgt
    27001 gaaaaacccc gattttttta aacgcgttct gcaagaaggc tctttggggt taggcgaaag
    27061 ttatatggat ggctggtggg aatgtgaccg actggatatg ttttttagca aagtcttacg
    27121 cgcaggtctc gagaaccaac tcccccatca tttcaaagac acgctgcgta ttgccggcgc
    27181 tcgtctcttc aatctgcaga gtaaaaaacg tgcctggata gtcggcaagg agcattacga
    27241 tttgggtaat gacttgttca gccgcatgct tgatcccttc atgcaatatt cctgcgctta
    27301 ctggaaagat gccgataatc tggaatctgc ccagcaggcg aagctcaaaa tgatttgtga
    27361 aaaattgcag ttaaaaccag ggatgcgcgt actggatatt ggctgcggct ggggcggact
    27421 ggcgcactac atggcatcta actatgacgt aagcgtggtc ggcgtcacca tttctgccga
    27481 acagcaaaaa atggctcagg aacgctgtga aggcctggat gtcaccattt tgctgcaaga
    27541 ttatcgtgac ctgaacgacc agtttaatcg tattgtttct gtggggatgt tcgagcacgt
    27601 cggaccgaaa aattacgata cctattttgc agtggtggat cgtaatttga aaccggaagg
    27661 tatattcctg ctccatacta tcggttcgaa aaaaaccgat ctgaatgttg atccctggat
    27721 taataaatat atttttccga acggttgcct gccctctgta cgccagattg ctcaatccag
    27781 cgaaccccac tttgtgatgg aagactggca taacttcggt gctgattacg atactacgtt
    27841 gatggcgtgg tatgaacgat tcctcgccgc atggccagaa attgcggata actacagtga
    27901 acgctttaaa cggatgtttt cctattatct gaatgcctgc gcaggtgctt tccgcgcccg
    27961 tgatattcag ctctggcagg tggtgttctc acgcggtgtt gaaaacggcc ttcgagtcgc
    28021 tcgctaaagg ctattctatc gccccctctc cgggggcgat ttcagatcag gcttctgtac
    28081 ctggttgatt catggcattt tctcgtgccg ccagcacacg ttctaccgta tctaccactg
    28141 tctgagtttg tggatcgatt tcaatgttga cgcgtgcgcc aagttttttc ttcccaagag
    28201 tcgtgcgttc cagtgtttcc ggaattaaat ggacgcaaaa acgcgttggc gtgacttcgc
    28261 cgacggtcag gctaataccg tcgatgccaa taaatccttt gtacataata tatttcatca
    28321 actgactatc ctggacttta aaccagatct ggcgattatt ttccgaggtt aatattttcg
    28381 ccacttcagc ggtggtcata atatgacctg acattaagtg tccgccaatt tcatcgctga
    28441 attttgccgc acgctcaacg tttacccaat cccccacttt taaatcgcca agattggtaa
    28501 tgcgcaacgt ttctttcatc aggtcaaaac tgacatggtt gccgttaatt tccgtcacgg
    28561 tcaggcagca accgttatgc gccacggaag caccggtttc cagaccgtcc aacatgtagt
    28621 cgggtaactc caccacatgt gtgcgaaaat ttggtttctc gtcaatcgac accagttttg
    28681 cggtgccctg tacaatcccc gtaaacatac ttacaactcc tgaaatcagt taagacattc
    28741 tgttcagcac aatagcaggt ggaaaacgcc cttgccagtg aagggataag aatggctatt
    28801 ttttcactgg agaattaata aatcctcgct acaatagact gaatttcccc tgcttcttct
    28861 ttttgctgcc cattcaggcg gctttttagt ctctcatata actacaaata aaaggtgttc
    28921 acgtgcagaa gtatatcagt gaagcgcgtc tgttattagc attagcaatc ccggtgattc
    28981 tcgcgcaaat cgcccaaact gcgatgggtt ttgtcgatac cgtgatggcg ggcggctaca
    29041 gtgccaccga catggcggcg gtcgctatcg gtacttctat ctggcttccg gcgatcctct
    29101 ttggtcacgg actgctgctg gcattaacgc cggttatcgc gcaattaaat ggttccggtc
    29161 gacgtgagcg cattgcgcat caggtgcgac aaggtttctg gctggcgggt tttgtttccg
    29221 ttctcattat gctggtgctg tggaatgcag gttacattat ccgctccatg gaaaatatcg
    29281 atccggctct ggcagacaaa gccgtgggtt atctgcgtgc gttgttgtgg ggcgcgccgg
    29341 gctatctgtt cttccaggtt gcccgtaacc aatgtgaagg tctggcaaaa accaagccgg
    29401 gtatggtaat gggctttatc ggcctgctgg tgaacatccc ggtgaactat atctttattt
    29461 atggtcattt cggtatgcct gagctcggtg gcgttggttg tggcgtggct actgcggcgg
    29521 tgtattgggt catgttcctt gccatggttt cttacattaa acgcgcccgc tccatgcgcg
    29581 atattcgtaa cgaaaaaggc accgcgaaac ccgatcctgc ggttatgaaa cgactgattc
    29641 aactcggttt gccgattgcg ctggcactat tctttgaagt gacactgttt gccgtcgtgg
    29701 ctctgttagt gtctccgctc ggtattgttg atgtcgcagg acaccagatt gccctgaact
    29761 ttagttcact aatgttcgtg cttccaatgt cgctggcggc agcggtaact atccgcgtag
    29821 gttatcgtct gggtcagggc tcaacgctgg atgcgcaaac cgctgcgcgg accgggctta
    29881 tggtgggtgt ctgtatggca accctgacgg ccattttcac ggtttcactg cgggagcaaa
    29941 tcgccctgtt gtacaacgac aatcccgagg ttgtaacgct ggctgcgcat ttgatgttgc
    30001 tggcggcggt atatcagatt tctgactcta tccaggtgat tggcagtggg attttgcgtg
    30061 gttataaaga tacgcgttcc attttctata tcacctttac ggcttactgg gtgctgggct
    30121 tgccaagcgg ctatattctg gcactgaccg atctggtcgt tgaacctatg gggccagcag
    30181 gcttctggat aggctttatt attggcctga cgtcggcagc cattatgatg atgctgcgta
    30241 tgcggttcct gcaacgtctg ccgtcagtta tcattctgca acgagcatcc cgctaataaa
    30301 gacaaggcgc aaccttcacg ggttgcacct gtgtttttac gcaggctgga gcgttgcgcc
    30361 aatcccgtct tcgtctggct gtaatttcag agcgttgcac agagtttgcc gactggcatc
    30421 tgttatctca acgtgtatat ccccggtaac ttcccctttc acattgatga agtcaggtga
    30481 gatttctttc gcactggttt gcaggcaaat cgctccctct ccgcgcaggc gtttcacttt
    30541 cagttgcaca tgcgttgccg caccagtgat cagccacagt tttccgccat tcagattgat
    30601 gttaccaaca ctaaaagtga caccgtcacc ttttgccgta ctgccgtcga gaatcaacac
    30661 accgccctgc tgtacagtaa tcgttgattg ttgcagatct gcgccatagc caataatcat
    30721 tgaagcgccg tccagtaatg caacactccc ggtcagttca accggtgcgc gatcttcctc
    30781 tacgacaaaa ttttcgtccg cgctggtggg tgacaacagg atcactgttc caccttgtat
    30841 tacggcattt tccagcgtac cggcatgcac ttcagcccgc ccccccacat tcacggacag
    30901 gttttgcgtc ttaccggaac tgtagagctg aaggccatcc gtccccagac gataaatgga
    30961 tccattctca acaatagtgt cagagtcttc accaccgaga ttattcatgg tgccaccagc
    31021 aagcaacgta tcactggctt tcccggccag cataaaaacg ccgccctgat taatctcaca
    31081 attgctggct tccccacctg gatacaccaa caattcacca ccttcatcta ccacgaccgc
    31141 tgaggttgtc ccattaacca acaggccgcc ctcttgatcg agaatgattt tttccgcgcg
    31201 atgtccttcc agtacacgca ggttaccgcc attttccagc aacaaaccgc aggcataacc
    31261 tttatcaacg ctgaattcac cttcgggatg gcggccatta accgtagcga gcgtagagag
    31321 actaattgcg cctccctcgg actgaacaat atctgtggca atggcaccgt cgctgaccga
    31381 tagcgtgcca ttgttaccgt actgtgtgca tttggcgatc ccaccggttg ccactttcaa
    31441 ccagccagcc cccgtgacca cggtattttc ggatcttccg ccagcttcaa caatcaactc
    31501 gccttcaata agttgcgtcg cgccaatgac ctcgccggtc ttaacaattt gcacattccc
    31561 gtcgctcatc aagtttttcg catcagatcc catgatttat tcctttgctt catctgtgtg
    31621 cctttattgc tacctaagtg taaaggctac ggaggattta tccacgacag atttgagatg
    31681 gtggcaaaca actctgttta aactctgata cacgaattat tgggttgtat cagatgtaaa
    31741 tgcgatcctg aataaaaatc gcccttgcaa atcaacaaaa tatagccaat tcgcttaaaa
    31801 gctctgcaaa cggtcgaaat agcgcagaaa attacgtttt gcctcttgcc accttcccac
    31861 tctgccgcta atattcgtcc ccgttgtcac ctacaacgtt gcgttcatag ctcagttggt
    31921 tagagcacca ccttgacatg gtgggggtcg ttggttcgag tccaattgaa cgcaccatcc
    31981 tgcgtccgta gctcagttgg ttagagcacc accttgacat ggtgggggtc ggtggttcga
    32041 gtccactcgg acgcaccaga ttttcttaat ctggtcttct cctttttccc tctgtttctt
    32101 ctctgtatcc aatacgttaa aagatttaca ctgtcttcgt atgcgttatc agaaggagaa
    32161 tcgctatggc aactttgtta caacttcatt ttgcttttaa tggcccattt ggcgacgcaa
    32221 tggctgagca gcttaaacca cttgctgagt cgattaatca ggaacctggt tttctgtgga
    32281 aggtatggac agaaagtgaa aagaaccacg aagccggtgg gatctacctt ttcactgatg
    32341 aaaaaagcgc ccttgcctat ctggaaaaac atactgcccg actgaaaaat ctcggagttg
    32401 aggaagttgt cgccaaagtt tttgatgtca atgagccact gagtcaaatc aatcaggcaa
    32461 aactcgcctg acagaattta atcaagggcg gttagcgccc ttttcatccc tgtctgaaat
    32521 ttctcaaatt ctaaaaatct caaccaaact tatctgataa cactaaattc gaaagaatgc
    32581 gtacaggtaa gtaacaatga aaaaaattgc tattgtgggt gccgggccta cggggatcta
    32641 caccttattc tcg
//
LOCUS       DAJVTL010000038        32222 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.038, whole genome shotgun sequence.
ACCESSION   DAJVTL010000038 DAJVTL010000000
VERSION     DAJVTL010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32222
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.038"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1390)
                     /locus_tag="OQQ26_001679"
     CDS             complement(<1..1390)
                     /locus_tag="OQQ26_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001723373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1857163.1"
                     /translation="MRRAISYIRFSSERQLKGDSVRRQSKLVTDWLDKNPEFYLDSSL
                     SFKDLGKSAFSGKHLKGGLGDFLTAIEKGLVKAGDTLLIESLDRLSRQDIDIASELLR
                     RILRAGVDVVTLSDGEHYTRESLKDPLALIKSILIMQRAHEESLRKSERVQAAWNRKK
                     ELISEGIKVSRRCPAWLKLNDDRRTFTIIPDKVEVVKRAFDLRLQGLSFWAITRTLND
                     EGHLSLNQYTPKQKGWSDTAVKKLLRNRAVIGCFTPAGREEVQGYYPAIISESLFYRV
                     QQLNTGQYGRASVSSNPLSVNLFRGIIKCSECGATIVLGGYALKRFGMYRCPNRSANR
                     CSAKAISRKQTDATILYMLALCDRFETENTETIDSLKLQREDLQRKISKMAELAIELD
                     DMTIITEKLRDMKNALSKLNHDIEEETKRIKAITTGSLKDIDRTTKEGMVETQLLIKG
                     VLKEIVIDAAKRR"
     gene            complement(1414..1611)
                     /locus_tag="OQQ26_001680"
     CDS             complement(1414..1611)
                     /locus_tag="OQQ26_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter"
                     /protein_id="HCS1857164.1"
                     /translation="MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQL
                     GVTGHSALNMWSGIVFSIIGS"
     gene            complement(1783..2703)
                     /gene="lpxL"
                     /locus_tag="OQQ26_001681"
     CDS             complement(1783..2703)
                     /gene="lpxL"
                     /locus_tag="OQQ26_001681"
                     /EC_number="2.3.1.241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) lauroyltransferase"
                     /protein_id="HCS1857165.1"
                     /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL
                     GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
                     RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEAGIGVYRPNDNPL
                     IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
                     AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
                     VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            2928..3980
                     /locus_tag="OQQ26_001682"
     CDS             2928..3980
                     /locus_tag="OQQ26_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706977.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HCS1857166.1"
                     /translation="MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDA
                     LYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDD
                     GKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYE
                     YEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGF
                     NKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDS
                     HTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNK
                     SRGRLNTTLGIPDPTE"
     gene            complement(4022..4597)
                     /locus_tag="OQQ26_001683"
     CDS             complement(4022..4597)
                     /locus_tag="OQQ26_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HCS1857167.1"
                     /translation="MKKSLLGLTFASLMFTAGSAIAADYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTTKY
                     PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK
                     IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
     gene            complement(4601..5167)
                     /locus_tag="OQQ26_001684"
     CDS             complement(4601..5167)
                     /locus_tag="OQQ26_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HCS1857168.1"
                     /translation="MSFTNTPERYGVISAALHWLSAIIVYGMFALGLWMVTLSYYDGW
                     YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLF
                     AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
                     FMALKHHFIDKDDTLKRMLGKSSSDYGV"
     gene            complement(5428..5541)
                     /locus_tag="OQQ26_001685"
     CDS             complement(5428..5541)
                     /locus_tag="OQQ26_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceO family protein"
                     /protein_id="HCS1857169.1"
                     /translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
     gene            complement(5589..6707)
                     /gene="solA"
                     /locus_tag="OQQ26_001686"
     CDS             complement(5589..6707)
                     /gene="solA"
                     /locus_tag="OQQ26_001686"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HCS1857170.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLTN
                     VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
                     EAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRK
                     VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
                     PFAEVASDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
                     LSGHGFKFASVLGEIAADFAQDQKSDFDLTPFRLSRFQ"
     gene            complement(6822..7076)
                     /gene="bssS"
                     /locus_tag="OQQ26_001687"
     CDS             complement(6822..7076)
                     /gene="bssS"
                     /locus_tag="OQQ26_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HCS1857171.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDFPVNEYRRH"
     gene            complement(7366..7611)
                     /gene="dinI"
                     /locus_tag="OQQ26_001688"
     CDS             complement(7366..7611)
                     /gene="dinI"
                     /locus_tag="OQQ26_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein I"
                     /protein_id="HCS1857172.1"
                     /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
                     AAANNLSVIGATKEDKQRISEILQETWESADDWFVSE"
     gene            complement(7685..8731)
                     /gene="pyrC"
                     /locus_tag="OQQ26_001689"
     CDS             complement(7685..8731)
                     /gene="pyrC"
                     /locus_tag="OQQ26_001689"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HCS1857173.1"
                     /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYRRAIVMP
                     NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAA
                     KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIES
                     VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP
                     HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
                     GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
                     PFLAGETVRWSVKQ"
     gene            complement(8837..9397)
                     /locus_tag="OQQ26_001690"
     CDS             complement(8837..9397)
                     /locus_tag="OQQ26_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1857174.1"
                     /translation="MNKFLFAAALIVSGLLVGCNQLTQYTLTEQEINQSLAKHNNFSK
                     DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
                     VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
                     QGEAMAKKLAKGIEVKPGEIVIPFTD"
     gene            complement(9531..10178)
                     /gene="grxB"
                     /locus_tag="OQQ26_001691"
     CDS             complement(9531..10178)
                     /gene="grxB"
                     /locus_tag="OQQ26_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HCS1857175.1"
                     /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
                     QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL
                     PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
                     PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI"
     gene            complement(10242..11450)
                     /gene="mdtH"
                     /locus_tag="OQQ26_001692"
     CDS             complement(10242..11450)
                     /gene="mdtH"
                     /locus_tag="OQQ26_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HCS1857176.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
                     GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR
                     LMAGLLIMSLSMVPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY
                     MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR
                     AARRLLERDA"
     gene            11686..12270
                     /gene="rimJ"
                     /locus_tag="OQQ26_001693"
     CDS             11686..12270
                     /gene="rimJ"
                     /locus_tag="OQQ26_001693"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HCS1857177.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
                     HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
     gene            12281..12928
                     /locus_tag="OQQ26_001694"
     CDS             12281..12928
                     /locus_tag="OQQ26_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceH family protein"
                     /protein_id="HCS1857178.1"
                     /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLRESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     ITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE
                     SRYMHLFSGEVEDQPAVTAMSNVVDGDLQTRVEALEIEVAELKQRLDSLLAHLGD"
     gene            12930..13853
                     /locus_tag="OQQ26_001695"
     CDS             12930..13853
                     /locus_tag="OQQ26_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCS1857179.1"
                     /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALP
                     ICDSWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD
                     AERLVELAARKKLTLMVGFNRRFTPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT
                     LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG
                     SQRETVQAVTDGALIDITDMREWREERGQGVVNKPIPGWQSTLEQRGFVGCARHFIEC
                     VQNQTVPQTAGEQAVLAQRIVDKIWRDAMSE"
     gene            13963..15498
                     /gene="murJ"
                     /locus_tag="OQQ26_001696"
     CDS             13963..15498
                     /gene="murJ"
                     /locus_tag="OQQ26_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HCS1857180.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
                     INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
                     SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
                     AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
                     RTV"
     gene            complement(15538..15954)
                     /gene="flgN"
                     /locus_tag="OQQ26_001697"
     CDS             complement(15538..15954)
                     /gene="flgN"
                     /locus_tag="OQQ26_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HCS1857181.1"
                     /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
                     QKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEIAVKTQQLRQMNQHNGWLLEGQIE
                     RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI"
     gene            complement(15959..16252)
                     /gene="flgM"
                     /locus_tag="OQQ26_001698"
     CDS             complement(15959..16252)
                     /gene="flgM"
                     /locus_tag="OQQ26_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HCS1857182.1"
                     /translation="MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLS
                     DAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN"
     gene            complement(16328..16987)
                     /gene="flgA"
                     /locus_tag="OQQ26_001699"
     CDS             complement(16328..16987)
                     /gene="flgA"
                     /locus_tag="OQQ26_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HCS1857183.1"
                     /translation="MLAIKRSVAIIAILFSPLSAASNLTSQLQTFFSAQLAGVSDEVR
                     VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
                     PIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAW
                     RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILIN
                     L"
     gene            17143..17559
                     /gene="flgB"
                     /locus_tag="OQQ26_001700"
                     /pseudo
     CDS             17143..17559
                     /gene="flgB"
                     /locus_tag="OQQ26_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415591.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
     gene            17563..17967
                     /gene="flgC"
                     /locus_tag="OQQ26_001701"
                     /pseudo
     CDS             17563..17967
                     /gene="flgC"
                     /locus_tag="OQQ26_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
     gene            17979..18674
                     /gene="flgD"
                     /locus_tag="OQQ26_001702"
     CDS             17979..18674
                     /gene="flgD"
                     /locus_tag="OQQ26_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HCS1857184.1"
                     /translation="MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLK
                     NQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVML
                     PGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVH
                     SFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNNGNTLDLGT
                     YGTTTLDEVRQII"
     gene            18699..19904
                     /gene="flgE"
                     /locus_tag="OQQ26_001703"
     CDS             18699..19904
                     /gene="flgE"
                     /locus_tag="OQQ26_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HCS1857185.1"
                     /translation="MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA
                     GSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKL
                     DENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS
                     SDPLPSVNAFDASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWEVYTQDSSDP
                     TDTADRAMTLVFNANGVLTSNPTENITTGAINGAEPATFSLSFLNSMQQNTGANNIVA
                     TTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASKGDNVWSA
                     TQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQ
                     ILNTLVNLR"
     gene            19924..20675
                     /gene="flgF"
                     /locus_tag="OQQ26_001704"
                     /pseudo
     CDS             19924..20675
                     /gene="flgF"
                     /locus_tag="OQQ26_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415595.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgF"
     gene            20813..21595
                     /gene="flgG"
                     /locus_tag="OQQ26_001705"
     CDS             20813..21595
                     /gene="flgG"
                     /locus_tag="OQQ26_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HCS1857186.1"
                     /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
                     LYQTIRQPGAQSSEQTTLPSGLQIGTGGRSVATERLHSQGNLSQTNNSKDVAIKGQGF
                     FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSISIGRDGVVSVT
                     QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY
                     VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL"
     gene            21648..22346
                     /gene="flgH"
                     /locus_tag="OQQ26_001706"
     CDS             21648..22346
                     /gene="flgH"
                     /locus_tag="OQQ26_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HCS1857187.1"
                     /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
                     NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            22358..23455
                     /gene="flgI"
                     /locus_tag="OQQ26_001707"
                     /pseudo
     CDS             22358..23455
                     /gene="flgI"
                     /locus_tag="OQQ26_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415598.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
     gene            23455..24384
                     /gene="flgJ"
                     /locus_tag="OQQ26_001708"
     CDS             23455..24384
                     /gene="flgJ"
                     /locus_tag="OQQ26_001708"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
                     /protein_id="HCS1857188.1"
                     /translation="MISDSKLLASAAWDAQSLNELKAKASEDPAANIRPVEGMFVQMM
                     LKSMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQPLPE
                     ESTPAAPMKFPLETVVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPAQLAS
                     QQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYE
                     NGEAKKVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTATSAEQGAQALRDAGYATD
                     PHYARKLTNMIQQMKSISDKVSKTYSMNIDNLF"
     gene            24450..26093
                     /gene="flgK"
                     /locus_tag="OQQ26_001709"
     CDS             24450..26093
                     /gene="flgK"
                     /locus_tag="OQQ26_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HCS1857189.1"
                     /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA
                     NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS
                     TSSLATQMQDFFTSLQTLVSNAKDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI
                     AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS
                     VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN
                     TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNSQHKAGFDANGDAGEDFFAIGKPA
                     VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV
                     AFDGPELTFTGTPAVNDSFTLKPVSDTIVNMDVLITDEAKIAMASEEDAGDSDNRNGQ
                     ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSTTQGNVVTQLSNQQQSIS
                     GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR"
     gene            26105..27058
                     /gene="flgL"
                     /locus_tag="OQQ26_001710"
                     /pseudo
     CDS             26105..27058
                     /gene="flgL"
                     /locus_tag="OQQ26_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309488.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
     gene            complement(27253..30429)
                     /gene="rne"
                     /locus_tag="OQQ26_001711"
     CDS             complement(27253..30429)
                     /gene="rne"
                     /locus_tag="OQQ26_001711"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HCS1857190.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPTEPAAPVVAPAPKAAPATPAAPA
                     QPGLLSRFFGALKALFSGGEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD
                     TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRR
                     RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV
                     VAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS
                     RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV
                     EEQRKQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPVPVAEPQPEVVETTH
                     PEVIAAAVTEQPQVITESDVAVAQEVAEPVVEPQEETADIEEVAETAEVVVAEPEVVA
                     QPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTF
                     AFEGKGAAGGHTATHHASAAPARPQPVE"
     gene            31002..31961
                     /gene="rluC"
                     /locus_tag="OQQ26_001712"
     CDS             31002..31961
                     /gene="rluC"
                     /locus_tag="OQQ26_001712"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000846341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HCS1857191.1"
                     /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
                     LNRLFLHAAALKFTHPGTGEVMRIEAPMDDGLKRCLQKLRNAH"
     gene            complement(32072..>32222)
                     /gene="yceF"
                     /locus_tag="OQQ26_001713"
     CDS             complement(32072..>32222)
                     /gene="yceF"
                     /locus_tag="OQQ26_001713"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
                     /protein_id="HCS1857192.1"
                     /translation="HCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGK
                     NPLMG"
BASE COUNT         7861 a         8076 c         8445 g         7840 t
ORIGIN      
        1 agcgacgttt agcggcatct ataactattt ctttgagtac gcccttgata agtagctgtg
       61 tctctaccat cccttccttt gttgtcctgt caatatcttt gaggcttcca gttgtgatgg
      121 cctttatccg ctttgtttcc tcttcgatat catgattgag ttttgatagc gcattcttca
      181 tgtcgcgtaa tttctctgtg ataattgtca tatcatcgag ttcaatagca agttctgcca
      241 tttttgagat tttacgctgc aaatcttcac gctgtaattt aaggctatca atagtttcag
      301 tattttcagt ttcaaaacgg tcgcataatg cgagcatgta aaggatagtt gcatccgttt
      361 gcttacgact gatagccttt gcactacacc tgttagctga acgattaggg catctgtaca
      421 ttccaaaacg ttttaaggca tatccaccaa gaacaatagt agccccacac tcagaacatt
      481 tgatgatacc cctgaacaag ttgactgata gcggattact tgatacagaa gccctaccat
      541 attgccctgt gttcagttgc tgtactcgat agaatagtga ctcactgatt attgcggggt
      601 agtaaccctg aacttcttca cgtccagcag gtgtgaaaca tccaatcaca gcacgatttc
      661 tgagtagttt ctttacagca gtatcagacc accccttttg tttgggtgtg tattgattca
      721 atgacaagtg gccttcatcg tttaaagttc tggtgatagc ccaaaagctt aaaccctgta
      781 atctcaggtc aaatgctcgt ttaacaactt ccactttatc aggaatgatt gtgaatgttc
      841 gacggtcatc attcaacttg agccatgcag ggcaacgcct agataccttg ataccttcag
      901 agatgagttc ttttttacgg ttccatgctg cctgtacacg ctctgattta cgtagtgatt
      961 cctcatgcgc cctctgcatt atcaaaatgc ttttaatcag ggctaacggg tcttttaaac
     1021 tttctcgtgt gtaatgttct ccatcgctca gtgtgactac atctacacca gcccttaaga
     1081 tacggcgtaa tagctcagaa gcaatatcaa tatcctgacg tgacagacgg tctaaactct
     1141 cgattagtag cgtatcacca gctttaacaa gccctttctc gatagcggtt aaaaaatcac
     1201 ctagaccacc tttcaggtgc ttaccactaa aagcactttt ccccaaatct ttaaagctca
     1261 aggatgaatc caagtaaaac tcagggttct tatcaagcca gtcagtaacc agcttagatt
     1321 gtctgcgtac agagtcccct tttagttgtc gttcacttga aaatctgatg tagctgattg
     1381 cccgtctcat attcaatacc taaaatgatg tgtttaggaa cctattatac tgaagacaat
     1441 accggaccac atattcaggg cggagtgacc ggtaacgcca agctgctcaa cgtagagggg
     1501 taagaagggc attaccagac tgaaggcggc accggtaaga aaacagccta gccaggcgac
     1561 gatcaggttt cgtttccagt ttataggggt gtcattttca cagggtgaca tagcaatccg
     1621 ctgttggtgc gccaggcgcg gtgaacataa gaagaaaaga taagcacact aattatgcgc
     1681 ccgacttcca gggggcgcaa tccagagagc ttttatcgct aaatcagggg gatttgctgt
     1741 ggtaatgccg gatgccattc tgaagcatcc ggcatgggag atttaatagc gtgaaggaac
     1801 gccttccggg cgtgttttaa agcgacggtg taaccacata tactgctctg gtgccatcat
     1861 gatgcatttt tcgacaactt tgttcatcca cgcggcggta gtttcggcat catccagcgg
     1921 cggagaacac tctggcggca gcataatcaa ttgataccct ttgccatctg gcttacggcg
     1981 tggaacgaag ggcaccagac atgcgccgga catccgtgcc agcatccagg ttccggtcgt
     2041 ggtcgcagcc tgctcaacgg caaacaacgg gacgaaaacg cttgagcgcg ggccgtaatc
     2101 atgatccggt gcgtaccaga ccacttcgcc ttttttcagg gctttaatca tgccttttaa
     2161 atctttgcgg tcgagcatcg atttatttga gcgcaaacgg ccccaggttt gtagccagtc
     2221 aatcagtgga ttatcgttcg ggcggtaaac gccaatcccc gcttcctgca taccaaactg
     2281 ccgcgcaccc agctccagtg tcagaaaatg gatgccaact aacaggatgc cgcgtttttg
     2341 cgcctgcacg tcacgaatgt gttccatgcc gatcacttcc gtccagcggg cgattcggcg
     2401 gtccggccag aaccacgcca taccggtttc catcagtccc atgccaacgg attcgaaatt
     2461 cttcaccacc attttacggc gttcttgttc gctcatttcc gggaagcaca gttccaggtt
     2521 gcgatgcaca atttttgcgc gtcgtttcat aaaacgtaac gccagttttc ctaatccaca
     2581 accgaggcgg tagataaccg ggtagggcaa ttgcacgact aaccaaagta cgccaatacc
     2641 caaccaggtt aaccaataac gcggatgaag cagtgcggtg gagaacttgg gtagattcgt
     2701 catatcaatc ctgtttttca acctattcgg gcaattgtat gtattgtcgc attttttcgc
     2761 ccgcaaccaa aatttgtggc tgaagactgg gcgaaattgc cgcgcttgta aataacaaat
     2821 aatttttaat gcgcaaatgt agcgtaaaat gtgtggatgt taattatcga taattgctat
     2881 atcatgccgc ggatttttac tttcccatct cgcaggaacc gtacaccatg ccagtgttac
     2941 acaaccgcat ttccaacgac gcgttaaaag ccaaaatgtt ggctgagagc gaaccgcgaa
     3001 ccaccatttc gttttacaag tatttccaca tcgccgatcc taaggcgacc cgtgacgctt
     3061 tatatcagct gtttaccgcg ctgaatgttt ttgggcgagt gtatctggcg catgagggca
     3121 ttaacgcgca aatcagcgta cctgcgagca atgttgaaac atttcgcgcg cagctctatg
     3181 ccttcgaccc ggctttagag ggtttacgcc tgaatatcgc gttggatgat gacgggaaat
     3241 ccttctgggt actgcgcatg aaggtacgcg atcgcattgt tgccgacggt attgacgatc
     3301 ctcactttga tgccagcaat gttggtgagt atctgcaagc ggcggaagtg aacgccatgc
     3361 ttgacgatcc cgatgcactg tttatcgaca tgcgtaacca ctatgagtat gaagtggggc
     3421 actttgagaa cgcgctcgaa attccggcag ataccttccg tgagcagctg ccaaaagcag
     3481 tagagatgat gcaggcacat aaagataaaa aaatcgtcat gtactgcacc ggcggcattc
     3541 gttgtgaaaa ggccagtgcc tggatgaaac ataacggatt caacaaagtc tggcatatcg
     3601 agggcggaat tattgaatac gcccgtaagg cgcgcgagca gggcttgccg gtgcgtttta
     3661 ttggcaaaaa ttttgttttt gacgagcgga tgggcgaacg tatatcggat gagattatcg
     3721 cgcattgcca ccagtgcggt gcgccgtgcg acagccatac caactgtaaa aatgatggct
     3781 gccacctgct gtttattcag tgtccagtat gcgcggaaaa atacaaaggt tgttgtagtg
     3841 agatttgctg cgaagaaagc gcgttaccgc cagaagaaca gcgacgccgt cgggcaggac
     3901 gtgaaaatgg caataagatc tttaataagt ctcgtggacg tctgaataca acactgggta
     3961 ttcctgatcc aacagaataa atatcattgc cggatgcgtg ccatccggca acatttcact
     4021 cttacttctg ctgtacgcct tccactgaaa taatcagatc cacttcctga gaagctggac
     4081 ctaaatctgt cttgatattg aagtctttga gcttaatttt gccttcggcc tcaaagcctg
     4141 cacgtttacc gccccatggg tcgtcgccct gaccaattaa tttcgcttcc agcgtgacgg
     4201 gtttggttac gccattcagc gtcagatcgc cggtaatatc cagttcgtca ccgtctttct
     4261 tcacgctggt ggaggtgaat gttgcctgtg gatattttgt ggtattgaga aaatccgcac
     4321 tgcgaagatg tttatcgcgt tcggcgtggt tagtatcgac gctggtggtg ttaattgtca
     4381 cattcacttt atcggcagct ggattttttt catcaaaggt aaaagtaccg tcgaaatctt
     4441 taaaggtgcc atataaccag ctatagccaa gatgctggat gcggaagtta acaaaggcgt
     4501 gctgaccttc tttgtcaatt ttgtaatcgg cggcaatcgc tgaaccggca gtgaacatca
     4561 gggacgcgaa ggttaaacca agcaggcttt ttttcatttt ttatactcca tagtcagatg
     4621 acgactttcc cagcatgcgc ttcagagtgt cgtctttatc gatgaaatga tgcttcaggg
     4681 ccataaatcc atgcataacg gacagtacta cgacgctcca cgcgagccaa aaatgcaggg
     4741 caccggcaaa gtctgcctgt gcgccagcgt cggcaagggt cgcggggacg tcaaaccagc
     4801 caaaaacgct gatcggttta ccatcagcag ttgagatcag atagccgctg atgccgatgg
     4861 cgaacagcaa taggtacaat gcgagatgtc cagcttttgc ggcaagacga gtcatgggcg
     4921 aataactcgg cagcggaccc ggcggtggag atatgacacg ccacagaacg cgaataacca
     4981 gccccatcat taacaaaata ccgatgcttt tatgcagttc gggtgctttg tgataccagc
     5041 catcataata actgagcgtg accatccaca gacctaaagc aaacatgccg tagacaataa
     5101 ttgcgcttag ccaatgtaag gccgcagata taacaccata gcgttcaggg gtatttgtga
     5161 atgacataag tgcatccaaa acgaatttgc gagagaaaga aaatggcgtg tcggagaatg
     5221 aattgcaaca caaaaataac aaattgaatg atatttattt ttatttcaat aattttgaat
     5281 taataatgaa agaattttca taagtttagt gggttcagca tcagagatgt ctggtgagtg
     5341 ctgtagaagc aggaataatc tcattcaatt tttcacgcta aatgaaaggg agattaaata
     5401 tttgtcagtt tatgtcagtg cggaaaacta aaaataaaac acatagatca gatccataat
     5461 tgccaacaat ccccagagaa aaagataaag catcagatgc tcgcgaatat tattgatgag
     5521 atagtgcaac agccgacgca ttaaatactc ctgtaaaaac ggcctcattc tggaggccgt
     5581 aatgatgatt attggaagcg ggaaagcctg aatggcgtca aatcaaaatc gcttttttgg
     5641 tcttgcgcaa aatcggcagc tatttcccct aaaactgacg caaatttaaa accgtgccca
     5701 ctcaggccgg taatgagcag tgtattatcg tggccgggta gggtatcgat aataaaatct
     5761 tcgtcaggcg aattatcata ggtgcaggca gcgccgtaca ggcagcaacc gatacccggc
     5821 aatacattgc gcaagaacgg gaaggcttct gacccatcac tggccacttc cgcaaacgga
     5881 acacgttcat ccgctgaatg gataacctgg cctccgttat gtttgccaat cttcaacgcg
     5941 tcgttttctg ccggaaaacc ataatattga tcgccattgg gcagttcacc ggtaaacgcc
     6001 gggaatttat tcttcacgct atagcgacca tcggcctgat accaggcaaa tactttgcgt
     6061 acgggctgga caggcagctc cgggagcagg tcttttaccc atgttcccgc gcagacaatc
     6121 gcttttttcg cctgatactc accgtcagcc gtttcaatag ttacgccatc atcgtcatga
     6181 cgaattgcgg tgaccggaca gttgaacagc tgcgcacagc ccgcttcctt cgccagttgg
     6241 atccaggttt taatcgccag ttcgctgcgc aaaaaaccgg aatcagtttc aaataagccg
     6301 atgtagttgt ccgggacgcg tatttctggc cagcgggcca taatcccttg cgcatcgagc
     6361 ttttcaacgt tgagttgcca ctgttcggcg ctgtgggcga cgttggtgag aaatgcggag
     6421 tcagccgggc cgaggttaat gacaccagag cgtacaaaaa tcggatcatc ttcgttgtgg
     6481 cgggagagct catcccacag cgtttgcgcg cggaggacca gcgggacata cttttcgcct
     6541 tcaccataag catggcgaat taatcgcgta tcgccgtggt ggctgccgtg ttgatgcggt
     6601 ggcatatggg cgtcggtcat tagcacgttt aaaccggcgc gggttgcata atacccggcg
     6661 gcagcgccta cggaaccgct gccaataatg atgagatcgt atttcatttt tttctctctg
     6721 ctctcatggt ttaagcagag taattaactg aatgcagata tacaacccag aaatggtaaa
     6781 ggcaccggtg aggtgccttt tgggtggatg gtcatgtcat gttaatgacg ccgatactcg
     6841 tttaccggga aatcaccgga ttcaattttg gcgattcctg cttctaatat cgaaataaat
     6901 tgtctggcaa catcagtggt taaccagagc gtctgaccaa cttcagtccc ttcctgctcg
     6961 gacttatttg gggtctggta gtgcaaacgc aacatcagcg catcatagct atcaacggtg
     7021 ctgatgtccc accctacgag cggatgagtc tgaatgactt cattattttt ttccatcatg
     7081 gccccctaat tcgtgttact agacaacgtt attcgaggtt caatgcgttt ttatctgaag
     7141 caacttcagt ataccaataa gtaagggtat tcaccgaatt tttaaagggg ggaacagata
     7201 aatttctgct tttaagattt atatgaacaa taaaacagca tgtcattcat atttttttag
     7261 catattgtgc aattattttg aggaagtgta gaaattttgt actcaaaatt cgtaagtaaa
     7321 ataaaaaagc cggggcgacc cggcaaaaac aaaaatcact gcatattatt cgctgacaaa
     7381 ccagtcatcg gcgctttccc acgtttcctg gagaatttcg ctaatgcgct gtttatcttc
     7441 ttttgttgcg ccaataaccg ataaattatt cgctgcggca taacgtaccg atacgtggcc
     7501 ttcattatca ggaaacgcat actgaatacg gcgggaaagt tcgccagcca gggcgtcaat
     7561 agccccagct ggcaatggag aagttttcgc tatggtgact tcaattcgca taatagcccc
     7621 ctgttgaatg tgctggttat ttatacaggt aaaataacct aatgacaaca ggaagctacg
     7681 atttttattg tttaacggac cagcgtaccg tttccccggc gaggaatggc accagggtgt
     7741 catcagtcag tgcgatgctt tcagcaacct gttgctcttc acgtaccagt tcgatgaatg
     7801 tgtcgttgac cggcaaccca tagaactgcg ggccgtttac agaacagaat gcttcaaagt
     7861 gctgcagagc attcatctct tcaaagacgg tagcgtaact gcccagcgcg gttggggcgt
     7921 tgaagcagcc cgcgcagccg caactgctct ctttgcgatg acgtgcatgt ggtgcagaat
     7981 ccgtaccgag gaatactcga ttaaaaccgc tggcgaccag ttcacgcaat gcttgttggt
     8041 gaatattgcg tttgaggatg ggtagacaat acaggtgcgg acgcacgcct ccaaccagca
     8101 tatggttgcg gttaaacatc agatgctgcg gagtgatggt ggcagccagc cgttcatttc
     8161 cgtcacggac atagtcggca gcatctttgg tggtgatgtg ctcaaaaacg actttcagcg
     8221 cagtcaggcg ctggcgcaga ggttccatca cgctttctat aaagcgcgct tcacgatcaa
     8281 aaatgtcgat atctgcatgt gtcacttcac catgcaccag tagcggcata ccgatttttt
     8341 ccatgcgctc aagtaccggc atgatggcgt caattgacgt cacgccgtgg ctggagttag
     8401 tggttgcgtt tgccgggtaa agttttgcag cggtgaacac gccttcgtta aatccgcgct
     8461 ccagctcatt aggatccagc gaatctgtta aataacaggt catcaatggg gtgaaatcgt
     8521 gcccggcagg tacggcgtca agaatacgct ggcgatacgc cacggcagcc tcaacggtgg
     8581 tcacgggcgg agccagattg ggcattacga tagcccgtct ataaatttcg ctggtatacg
     8641 gcacgacagt ttttaacatg tcgccatcgc ggaggtgaag gtgccagtcg tctgggcggc
     8701 ggatctttaa tacctgggat ggtgcagtca ttaatctcta tgctccggct gaagggatgt
     8761 ttttgccgga cacaaaggat aagcggaaac gttttccttt gcacgaaaaa taaagggcgc
     8821 gaatgcgccc tcgtcattaa tccgtaaacg gaatgacaat ttcgcctggc ttcacttcaa
     8881 tgcctttcgc cagtttcttc gccattgctt cgccctggct gccatcttcg cgcaggacgt
     8941 aagcaggttg ctggttaaag taattgcgta atgcctggtt caaataggga agcaacgttt
     9001 gcatcaccgt ttgcattttt tccggttgta ccgtcgcatc gaccacttcc atctctttca
     9061 ggaagatcgc gcctttttct ttatcaaaca cgggcagcgc tttcagcttc agtttcatgg
     9121 tcgctttctg gctaccgaac agggagttca tgtccagatt ggcgtctccg gttaaggtaa
     9181 ccttattcgg ctcttcgcga ccaatttggc tggtcaggtt tgtcagaaca atatgggcgt
     9241 cagccacgcc gggtaaaccg atatcttttg agaaattatt atgtttcgca agcgactggt
     9301 taatttcttg ttcggtgagg gtgtattggg tgagttgatt acagccaacg agaaggccac
     9361 tgacgatcaa tgcagcggca aataaaaact tgttcatggt agtcctcgac atgaaatctg
     9421 cgtcaatatc ctgacacaac gcagcatgtg tcaccagcga taaactcgcc agcagaaaaa
     9481 actgaaaacg gcggcaaccc gcgaatacag gctgccgcgg cgggtcagga ttaaatcgcc
     9541 attgatgata acaaattgat ttgtgtctgt ttcgccatat tatcgcggta atcagcaacg
     9601 cggcttggcc agttgattcc ggctaccagc gtcagattac gcagtagcgg aaatagctga
     9661 atatcatctt ccgaaagttc gccattcacg gcgttcggtt tgacgatcag tttgtccagc
     9721 gcacgcaaat catcgctgat attcttaatc agaccgtcag agtgggccag caggtcggca
     9781 aaattacccg cgctggcctc ttttttgtcg acgaaatatt tgcgcgcggc gggagtagaa
     9841 aactcatcaa atgccgattt ggcaaaacgc ggcaacagca gtttgtttgc gtagccattg
     9901 accttgcgca gccactcttc aatggcaggg gaacgtttgc cggtcagtaa cggtttgccg
     9961 tcgagtttat cgacatagtg aacgatgtcc atgctttctg gcatatagcg gctgtcatct
    10021 ttttgcagaa tgggaacctg tttttgaccg accatccggg tgggtgtttc tgcgtcgtcg
    10081 ttgagcagaa catgtaattc gacggggata tttttcaggc cgaaaatcat gcgggctttg
    10141 aggcagtaag ggcagtgatc gtaaatgtat agcttcacgt gactcctcca tttggctgtc
    10201 agttcacttt cagtatggag gagtcagggg ggagtatcaa atcaggcgtc gcgttcaagc
    10261 aaacgacgcg cggcgcgttt ctggctaaac tgccaaccca gcgcaaggaa agtgaagatg
    10321 ccaataatgc ccagcatcat ccacggaagc tctggctggt gcgccgattt gcccaggtca
    10381 aacagccagc cgccaccgat ataaccaata gcgccgccaa tcgccagacc cagacggcta
    10441 aaccccatat agctgccgcg agctcttgcg tccgccagcg aagcacttaa ggtttcacgc
    10501 gcaggctcgg caatgatcga cccgatataa aacagacaaa tcagggtgaa aagttgttgc
    10561 aggccgctga ccatgcccac cggcaccatg cttaatgaca ttatcaacag ccccgccatc
    10621 aaccggtgtt ccagacgaaa atgcttttca ctccagcggg cgatagggta gagcaacgtt
    10681 aacgacagac acgcttcaat ggcatacatc catttaacgg cagagggcgc gccagccaca
    10741 tcgttgacca taattggcag catcagcatc acttgtacag ccagcatgta gtaacccgcc
    10801 agcgtcagaa cataggtgac aaaacgcttg tcacgcatca cgcgggtcat gccttcgcga
    10861 acgggcgtgc gtacggtgga gagtttccat gccggtaaca accacgcatt gaacgccgca
    10921 cacagcacaa atagaactgc ccctgtggcg cagaccaggc gaaagtcgta ttgcaacagc
    10981 cagctcccca acaatgcgcc aatgaccgca ccggcactgt cctgcatcat caacagcgag
    11041 aaaaaacgac cacgttgttg tggacggatt agtttcacca ccagcgccga acgcggcgga
    11101 tcaaacaacg tgccgccgag tcccgagagc aggcatgaaa accacaatag ccacggttcg
    11161 tgggcgatac ccattgtggc gaatccggcg gcgcgcatca gcataccggt aacaatcatc
    11221 ggtttggcac caaagcggtc ggcaattgcg ccgccgaaaa tacccagacc ttgctgaata
    11281 aactggcgta gaccgagagc aataccgacc atgacggcgg cccagcccat ttgatcaacg
    11341 aagcggatag agatcagcgg gaagacaaca aagaacccca gcacgaccag catattatcg
    11401 atgagcagga aatatttacc caggttcctc gcctgcgata cgcgggacat ttcccctccc
    11461 gggaaataaa agatgagcac tttctattct gcattgccgc taagactttt cccatcactt
    11521 cggggacaat atttttttat caaaacgtcg ctttgataga gagtttttat caaatatgtg
    11581 aataatgcag aaaatggcat tttggacttt tcacagggtc tggttgcgca ggtatagtaa
    11641 tacttacagc gtattaaaga cgttacggga aggagtaggt atagaatgtt tggctatcgc
    11701 agtaacgtgc caaaagtgcg cttaaccaca gaccgactgg tcgtgcgtct ggtgcatgat
    11761 cgtgatgcct ggcgtcttgc ggattattac gcagagaatc gccatttcct caagccctgg
    11821 gagccagtgc gcgacgaaag ccactgttat ccatcaggct ggcaggccag gctggggatg
    11881 attaacgaat ttcataaaca aggttcagct ttctactttg gcttattcga cccggacgaa
    11941 aaagagatta ttggcgttgc caatttttcc aatgttgttc gtggctcttt tcatgcctgc
    12001 tatctcggtt attcgattgg gcaaaaatgg cagggcaaag gactcatgtt tgaagccctg
    12061 accgcagcca ttcgttatat gcagcgcacc caacatattc atcgcattat ggctaattat
    12121 atgccgcaca ataaacgcag cggtgattta ctggcgcgac tgggttttga aaaagaaggc
    12181 tatgcgaaag actatctgtt gattgatgga caatggcgcg atcacgtact gacggcatta
    12241 actaccccag actggacgcc cggccgctaa ggagaatctc atgaaatatc aacttactgc
    12301 ccttgaagct cgcgtgattg gttgcttgct ggaaaagcag gtgaccacgc cggagcaata
    12361 cccgctctca gtcaatggtg tagtcacggc ctgtaatcag aaaacgaacc gtgaaccggt
    12421 catgaatctg agagaatccg aagtgcagga acagctggat aatctggtca aacgtcatta
    12481 tctacgcaca gtgagcggtt ttggtaatcg ggtcaccaaa tatgagcaac gtttttgtaa
    12541 ttcagaattt ggcgatctga aactgagcgc cgcagaagtg gcgttaatca ccacgttgtt
    12601 attgcgtggt gcccagacgc cgggtgaact gcgcagccgc gccgcgcgaa tgtatgaatt
    12661 cagcgatatg gcggaagtgg agtcgacgct ggaacaactg gcgaatcgcg aagatggtcc
    12721 ttttgtggtg cgtctggccc gcgaaccggg taaacgcgaa agccgctaca tgcatctttt
    12781 cagtggtgag gttgaagatc agccggcggt aacggctatg tcgaacgtgg ttgacggtga
    12841 tttacagacc cgcgtcgaag ccctggaaat cgaagtggca gaactgaaac aacgtcttga
    12901 ttcgttgctg gcccatctgg gagattaaag tgaaaaaatt acgtatcggc gtagtgggat
    12961 taggcggcat tgcgcaaaaa gcgtggttac cggtgctggc ggcagcgtct gactggacgt
    13021 tacaaggagc ctggtcgcct acgcgcgcca aagccctgcc aatttgtgac agctggcgca
    13081 ttccttatgc cgattcgtta tccagccttg ccgccagttg tgatgcggtt tttgtgcact
    13141 ccagcaccgc cagccacttt gacgtggtca gtacgttact caatgcgggg gtacatgtct
    13201 gtgtcgataa accgctggca gaaaatctgc gcgatgctga aaggctggtg gaactggcgg
    13261 cgcggaaaaa actgacgttg atggtcggtt ttaaccgtcg tttcacacca ctctacggtg
    13321 agttaaaaac gcaactcgcc accgcagcct cgctaagaat ggataaacat cgtagcaata
    13381 gcgtcgggcc acacgatctt tatttcacgt tgctggatga ttatctgcat gtggtggata
    13441 ccgcgctgtg gttgtcgggc ggcaaagcct ctctggatgg cggtacgcta ctgactaacg
    13501 acgctggcga aatgctgttt gccgagcacc atttttcggc cggtcctttg cagatcacca
    13561 cttgtatgca tcgccgtgcc ggaagtcagc gtgaaaccgt gcaggccgtg actgacggtg
    13621 cgctcatcga cattacggat atgcgcgaat ggcgtgagga gcgcgggcag ggtgtagtga
    13681 ataaaccgat tcctggttgg cagagcactc ttgagcaacg tggatttgtc ggctgtgcgc
    13741 ggcacttcat tgaatgcgtg caaaatcaga cagttccgca aaccgccggc gaacaggcag
    13801 tgctggcgca acgtatcgtt gacaagatct ggcgcgatgc gatgagtgaa taaaccctgt
    13861 aacatctggc ggtagcaatt caccataatc caggtagact attcgcctct ttcagcgcct
    13921 gccttgcagg cgttttgccc gtgggtctgg attagaacac cgatgaattt attaaaatcg
    13981 ctggccgccg tcagctcgat gaccatgttt tcgcgtgtgc ttggcttcgc acgagacgca
    14041 attgtcgcca gaatctttgg cgcagggatg gcaaccgacg cctttttcgt cgcttttaaa
    14101 cttcctaact tgttacgccg tatctttgcc gaaggggcat tttcccaggc atttgtaccg
    14161 attctggcgg aatataaaag taagcagggt gaagacgcca cgcgggtctt tgtctcttat
    14221 gtttctggcc tgctgacact tgcgctggcg gttgtgacgg tcgctggcat gctcgccgca
    14281 ccgtgggtga tcatggtgac tgcgccaggc ttcgctgaca cagctgacaa atttgccctg
    14341 accagccagc tactaaagat tacctttccc tatatcttgc tgatctccct ggcgtcgctg
    14401 gtgggagcga ttctgaatac gtggaaccgc ttctcgattc cggcgtttgc gccaacactg
    14461 cttaacatca gcatgattgg tttcgcgctg tttgccgcac cgtactttaa cccaccggtg
    14521 ctggcgctgg cgtgggctgt tacggtcggc ggcatcctgc agctggtgta tcagctaccg
    14581 cacctgaaga agatcggcat gctggtcctg ccgcgcatta acttccacga tgccggagca
    14641 atgcgcgtgg tgaaacagat gggaccggcg atccttggcg tctctgtgag ccagatctcc
    14701 ttaatcatca acaccatttt tgcctcgttt cttgcttccg gttcggtgtc ttggatgtat
    14761 tacgccgacc gcttaatgga gtttccctcc ggtgtgctgg gcgtggcgct tggcaccatt
    14821 ttgctgccgt cgctgtcgaa aagttttgcc agtggcaatc atgatgaata caaccgtttg
    14881 atggactggg ggttgcgtct ttgtttcctg ttggcgctgc cgagtgcggt tgcgttgggc
    14941 attctttcag gtccgttaac cgtttcgcta ttccagtacg gtaaatttac cgcgtttgat
    15001 gcgctgatga cccagcgggc gttaattgcc tactcggtgg gtttgattgg cctgattgta
    15061 gtgaaagtgt tggctcctgg cttttattcc cgccaggaca ttaaaacgcc agtgaaaatt
    15121 gccatcgtta cgctgatttt aacgcaattg atgaacctgg cgtttattgg tccgttgaaa
    15181 catgccgggc tgtcactttc tattggtctg gcggcgtgtc tgaatgcttc gctgctttac
    15241 tggcagttgc gtaagcagaa aatctttact ccgcaacccg gctggatggc gtttctgttg
    15301 cgtctggtgg tggcggtact ggtgatgtct ggcgtgcttt taggtatgtt acatatcatg
    15361 ccggagtggt cattgggtac catgccctgg cgcttactgc gtttaatggc ggtcgtgctg
    15421 gcggggattg ccgcgtactt cgctgcactg gcggtactgg gcttcaaagt taaagaattt
    15481 gcccgccgga cggtgtaaca atgcattccg gcctgcagtg caggccggag ataatattca
    15541 gatcgaaatc tttttaccgc cgcgatgggt tgttgaggtc tgaccgttcg ccccatatag
    15601 cgtcggttcc tgatgcggtt tcaacatttc cagcgcctgt tgattgcgct caatctgtcc
    15661 ttccagtaac cagccgttat gttgattcat ttggcgtagt tgctgcgttt tcacagcaat
    15721 ttcctgccag cgttgactaa tatcaacgct atttgctgta ttgggttctt tcctgcgtaa
    15781 ctgttcgagg taatccagcg tcgccagcag tgagcttttt tgttctgtaa tccattgcaa
    15841 ctggctgccg ttgatctgcc ccatagagag atgttgctgc tcttgatcca ttaccgtttt
    15901 gagatcgtta agcacagcgg acatctggtc gaggatctct gcaagacgtg tcatacgatc
    15961 agttactctg caagtcttgc tgagcttcgt tgatcagcgc atcggcaatt ttgccggtgt
    16021 ccatttttag ttcaccgtta cgaatcgcca gttttaacgc ttcgacacgt tcaagattga
    16081 tatcactgct gccgggttgc atcagttttg cttgcgcgtc gcttaacgtc acactggtgc
    16141 tggtggaggc ggttgttttt gccgcccggc tgttcgttac cggcgcgtca gtggtttcgc
    16201 gcggttgaac ggtgcttaca ggcttcagag gcgaagtgcg atcaatactc atggtttatt
    16261 cctcattgag ggcgctttta tcatgtgttg cttatttatc ggcaagggac gggtaatctt
    16321 taacagctta caggtttata agaatattcc catctgcatc aacaacgccg ctgactacct
    16381 gtcccgatac catgcgcacc cgcgcattct gtgcgacggc tgcattgttc agcgcctgac
    16441 cttctgcgtt ggcgctaaac ccatcaccgc tggcgatcac attgacgcgt tgtcccgctt
    16501 ttacccgcca tgcttggcga aactgggtta actggatagg ttgatcgggt gatagatcgc
    16561 gcaggctaat ggcatcaaca agttgattga tatccagcac cgtacgcggt ggcagggtat
    16621 ccagccgtcc gcgtttcagt ttgacattgc cagcttccag ctttcctccc cgcgcaatgg
    16681 gcatcgcggc aaccacataa tttcctgtgg cctgtacatt aacctgtaaa tatcgtttgt
    16741 cgttaccgca gcgtgccaac acattcacat tgccccacag gcgggaatta ttgctcatcg
    16801 aaagcaatgg ctgctcgcac ggtggtagta gattgggcgc tgtacgaata gaaacacgaa
    16861 cctcatcact tacccccgcg agttgggcgc taaaaaaggt ttgcaattgc gatgtgagat
    16921 tgctcgccgc acttaacgga ctgaacagta tcgcaatgat cgccacgcta cgttttattg
    16981 ccagcatttt cgccccccag ccatttctac aacgtgaatt gtacctgtcc gcaatggtca
    17041 tcaacggcat aaatagcgcc ccattttgcg tttattccgc cgataacgcg cgcgtaaagg
    17101 catttaagct gatggcagaa ttttgatacc tgcggaggag atatgctcga taagctcgac
    17161 gccgccttac gttttcaaca agaggcgctc aatctgcgcg cccagcgtta ggaagtgctg
    17221 gcagcaaaca tcgccaatgc cgatacccct ggttatcagg cgcgcgatat cgattttgcc
    17281 agtgaactta aaaaagtcat gcaacgtgga cgggatgcaa ccagtgtggt tgcactgacg
    17341 atgacctcaa cgcaacacat cccggcgcag gcgctgacgc ctcctaccgc agaactgcaa
    17401 taccgtattc cggaccagcc ttcgcttgac ggtaataccg tcgatatgga tcgcgaacgc
    17461 acccagtttg ccgataacag cctgcaatac cagatgagcc ttagcgcgtt gagcgggcaa
    17521 atcaaaggca tgatgaacgt tttacagagc ggaaattaac ggatggcact gctgaatatt
    17581 tttgatatcg ccgggtcggc gttaactgcc cagtcccagc gcctgaacgt ggcggccagt
    17641 aatctggcga atgctgatag cgtgaccggt cccgatggac agccatatcg ggcaaaacag
    17701 gtggtattct aggttaacgc tgcacctggt gctgcgacag gcggcgtaaa ggttgccgat
    17761 gttatagaaa gtcaggcccc ggacaaactg gtttatgaac cgggtaatcc gctggcggat
    17821 gcaaagggct acgtaaaaat gccgaacgtt gatgtcgtcg gggagatggt taacaccatg
    17881 tcggcgtcac gcagctatca ggccaatgtt gaagtgctca acacggtgaa aagcatgatg
    17941 ctgaaaaccc ttacgctcgg tcaataaagg agaaagctat gtccattgcg gtaaccacca
    18001 ccgatccgac aaataccggc gtcagtacca ccagcagtag ttcgctcacg ggcagcaacg
    18061 ccgcagattt acaaagcagt tttctgactt tgctggtggc gcagctgaaa aaccaggacc
    18121 cgaccaatcc aatggaaaac aacgagctga cgtcgcaact ggcacaaatc agcacggtca
    18181 gcgggattga aaaactcaat accacgctcg gatctatttc cggacagatt gataacagcc
    18241 agtcgttaca ggccagtaac ctgatcggtc acggcgtgat gctccccggc accactgttc
    18301 ttgcgggaac cggcagtgaa gaaggggctg tgaccacgac cacgccgttt ggtgttgagc
    18361 tgcaacaggc ggcagacaaa gttacggcca ccatcaccga taaaaatggc gcggttgtgc
    18421 gcaccattga cattggtgaa ctgaccgccg gagtccacag tttcacctgg gacggtacgt
    18481 tgactgacgg cagcactgcg ccgaacggtt cttacaacgt agcgattagc gccagtaacg
    18541 gtggtacaca actggttgcc cagccgctgc agtttgctct ggtgcagggt gtgatccgcg
    18601 gcaacaacgg taatacgctg gatctcggca cttacggcac caccaccctc gacgaagtac
    18661 ggcagataat ttaagccttc acatttcagg agtcagtcat ggccttttct caagcggtta
    18721 gcggattaaa cgctgccgcc accaacctcg atgttattgg caacaatatc gccaactccg
    18781 ccacctacgg ctttaaatca ggcacggcct cttttgccga tatgtttgcc ggttcgaaag
    18841 tgggactggg ggtaaaggtt gccggtatca ctcaggactt taccgatggc acgaccacca
    18901 acaccgggcg aggtctggac gttgctatca gccagaacgg ttttttccgt ctggtagaca
    18961 gcaacggttc ggtgttctac agccgtaacg gacaatttaa gctggatgaa aaccgtaacc
    19021 tggtgaatat gcaaggttta cagctgacgg gttacccggc aaccggtacg ccgcccacta
    19081 ttcagcaagg ggcgaatccg actaacattt cgatcccgaa taccctgatg gcagcgaaaa
    19141 ctaccaccac ggcgtcgatg cagatcaacc tgaattccag cgatccgctt ccctctgtta
    19201 acgcatttga tgccagcaat gcggatagct ataacaaaaa aggttcggtg actgttttcg
    19261 atagtcaggg taatgctcat gacatgagcg tctactttgt gaagaccggg gataataact
    19321 gggaggtcta cacccaggat agcagtgatc caacagacac agctgaccgt gcaatgacgc
    19381 tggtgtttaa tgccaatggc gttctgacgt caaatccaac agagaatatt accactggcg
    19441 caattaacgg tgcagaaccc gccacgttta gtctgagctt cctcaactcc atgcagcaaa
    19501 ataccggcgc taacaacatt gtggcaacca cccagaatgg ctacaaaccg ggcgatctgg
    19561 tgagttatca aatcaatgat gacggtacgg ttgtcggcaa ctattccaac gaacaaaccc
    19621 aactgctggg gcagattgta ctggcgaact ttgccaacaa cgaaggtctg gcatccaaag
    19681 gcgacaacgt ctggtctgcg acgcaatctt ctggcgtggc gctgttgggg acagccggga
    19741 cgggaaactt tggcaccctg accaacggtg cgctggaagc gtccaacgtc gatctcagta
    19801 aagaactggt caatatgatc gttgcccagc gtaactatca gtctaacgcc cagaccatca
    19861 aaacccagga ccagatcctc aacacgctgg ttaacttacg ctaatcgctg acgggatagc
    19921 tcaatggatc acgcaattta taccgcgatg ggagcagcca gtcagacgct gaatcaacag
    19981 gcggtaaccg ccagtaatct ggccaatgct tctatgcccg gttttcgcgc gcagttaaac
    20041 gccttgcgcg cagtgccggt tgaagggctt tcactgccca cgcgcacgct ggtaacggcg
    20101 tcaacaccgg gtgcagacat gacgcccggc aagatggatt acacctcgcg cccgctggac
    20161 gttgcgttgc agcaggatgg ctggccgtgc agaccgctga cggcagcgaa gggtatacgc
    20221 gtaatggcag cattcaggtt gatcccaccg ggcaactgac aattcagggg catcaggtga
    20281 taggcgaggc ggggccaatt gctgtgccgg aaggggcgga aatcactatt gctgccgatg
    20341 gcacaatctc ggcgctcaat ccgggcgatc cggcaaatac ggttgcgcca gtagggtgtc
    20401 tgaaactggt gaaagccacg ggcagcgaag tgcaacgcgg tgacgacggc atttttcgtt
    20461 taagcgcaga aacccaggcc acgcgagggc cggtactgca ggcagatcca accttgcgtg
    20521 tgatgtcggg gggtctggaa ggcagtaacg tcaatgccgt tgcggcaatg agcgacatga
    20581 ttgccagcgc gcggcgtttt gaaatgcaga tgaaggtgat cagcagcgtc gatgataacg
    20641 caggccgtgc taaccaactg ctgtcgatga gttaattgaa cgattgatga cattgcaata
    20701 aaagcgcgtg gactattccc tcgccccttt ggggagaggg ttagggtgag gggaaattca
    20761 cactgtcgcg tgcttctgct ctgcttgtca gcaatccact acaggacatt ttatgatcag
    20821 ttcattatgg atcgccaaaa cgggccttga cgcccagcaa accaatatgg acgtcattgc
    20881 caacaacctg gcaaacgtca gtactaacgg ttttaagcgt cagcgcgcgg tgtttgaaga
    20941 tctgctttat caaaccattc gccagccggg ggcacagtct tccgaacaaa ccaccttacc
    21001 ctccggatta caaatcggca cggggggacg ctcagtcgcc actgaacgct tacacagcca
    21061 gggcaatctg tcgcagacca ataacagcaa agatgtcgcg attaaagggc agggcttttt
    21121 ccaggtgatg ttgccagatg gctcatcagc ctatacccgt gacggctctt tccaggtgga
    21181 tcagaacggg caactggtga cggctggtgg ttttcaggtg cagccagcga tcaccattcc
    21241 ggcgaatgcg ttaagtatct ccatcggtcg tgatggcgtg gtcagcgtaa cccaacaagg
    21301 ccaggcagct ccggttcagg ttgggcagct caatctcacc acctttatga atgacaccgg
    21361 gctggagagc attggcgaaa acctctacac cgaaacgcaa tcctccggtg caccgaacga
    21421 aagcacgccg ggcctgaacg gtgcgggact gctgtatcaa gggtatgttg aaacgtctaa
    21481 cgtcaacgtg gcggaagaac tggtcaatat gattcaggtg caacgcgctt acgaaatcaa
    21541 cagtaaagcg gtgtccacca ccgatcagat gctgcaaaaa ctgacgcaac tctaaagcat
    21601 aaccggtggc aggttcaccg gtttactgat ttttgaagat gatagccatg caaaaaaacg
    21661 ctgcgcatac ttatgccatt tccagcttgt tggtgctttc actaaccggc tgcgcctgga
    21721 taccctccac gccgctggtg cagggggcga ccagtgcaca accggttccc ggtccgacgc
    21781 ccgtcgccaa cgggtctatt ttccagtctg ctcagccgat taactatggc tatcaaccgc
    21841 tgtttgaaga tcgtcgacca cgcaatattg gcgatacgct gaccatcgtg ttgcaggaga
    21901 acgtcagcgc cagcaaaagc tcctctgcga atgccagccg tgacggtaaa actaattttg
    21961 gctttgatac tgtgccgcgc tatttgcagg ggctgtttgg taacgctcgt gccgatgtcg
    22021 aagcctccgg tggtaacacg ttcaacggaa agggcggggc caatgccagc aataccttta
    22081 gcggcacgtt gacggtgacg gttgaccagg tactggtcaa cggcaacctg catgtggtgg
    22141 gtgaaaaaca gattgccatt aatcagggta ccgaatttat tcgcttctcg ggcgtggtta
    22201 atccacgcac tatcagcggc agcaataccg taccgtctac tcaggtggcg gatgcgcgta
    22261 ttgaatacgt aggcaatggc tacattaacg aagcgcaaaa tatgggctgg ttgcagcgtt
    22321 tcttccttaa cctgtcgcca atgtaagtga ggctgtggtg attaaatttc tctctgcatt
    22381 aattcttcta ctggttacga cggcggctca ggctgagcgt attcgcgatc tcaccagtgt
    22441 tcagggggta aggcaaaact cactgattgg ctatggtctg gtggtggggc tggatggcac
    22501 cggtgaccag acaacccaga cgccgtttac cacacaaacg cttaataaca tgctctcaca
    22561 gctgggaatt accgttccga cgggcaccaa tatgcagcta aaaaacgtcg ctgcggtaat
    22621 ggtgacagcg tcacttcctc cgtttggacg tcaggggcaa accatcgatg tggtggtttc
    22681 ttccatggga aatgccaaaa gcttgcgtgg aggtacgttg ttgatgacac cgcttaaggg
    22741 cgttgacagt caggtgtatg cgctggcgca gggcaatatt ctggttggcg gcgcaggagc
    22801 ctccgctggc ggtagcagtg ttcaggttaa ccaactgaac ggtggacgga tcaccaatgg
    22861 tgcggttatt gaacgtgaat tgcccagcca gtttggcgtc gggaataccc ttaatttgca
    22921 acttaacgac gaagatttca gcatggcgca gcaaatcgct gacaccatca accgcgtgcg
    22981 tggatatggc agcgccaccg cgttagatgc gcggactatt caggtgcgcg taccgagtgg
    23041 caacagttcc caggtccgtt tccttgcaga tatccagaat atgcaggtta atgtcacccc
    23101 gcaggacgct aaagtagtga ttaactcgcg caccggttcg gtggtgatga atcgcgaagt
    23161 gaccctcgac agttgcgcgg tagcgcaggg aaatctctca gtaacagtta atcgtcaggc
    23221 caatgtcagc cagccagata caccgtttgg tggtggacag actgttgtta ctccacaaac
    23281 gtagatcgat ttacgccaga gcggcggttc gctgcaaagc gtacgttcca gcgccagcct
    23341 caataacgtg gtgcgcgcgc tcaatgcgct gggcgctacg ccgatggatc tgatgtctat
    23401 tttgcaatca atgcaaagtg cgggatgtct gcgggcaaaa ctggaaatca tctgatgatc
    23461 agcgacagca aactactggc aagtgcggcc tgggatgcgc aatcactcaa cgaactaaag
    23521 gcgaaagcga gcgaagatcc ggcggcaaat atccgtccgg tggaagggat gttcgtgcag
    23581 atgatgttga aaagcatgcg cgacgcttta ccaaaagatg gcctgttcag cagcgagcac
    23641 actcgcctgt ataccagtat gtatgaccag cagattgccc aacagatgac ggcgggcaaa
    23701 ggtctggggc ttgcagagat gatggttaaa cagatgacgc cagaacaacc attgccagag
    23761 gagtccacgc cagcagcacc gatgaaattc ccgctcgaaa ccgtggtgcg ttatcaaaat
    23821 caggcgcttt cgcagctggt gcaaaaggcc gtgccacgta actacgatga ttcgctgccg
    23881 ggtgacagta aagcattcct cgcgcaactc tcgctgcccg cccaactggc aagccagcaa
    23941 agcggtgtgc cacatcattt gatcctcgct caggcggcac tggaatctgg ttgggggcaa
    24001 cggcaaatcc gccgcgaaaa cggcgagccg agctataacc tgtttggtgt caaagcctct
    24061 ggcaactgga aagggccagt tactgaaatc accacgactg aatatgaaaa cggcgaagcg
    24121 aagaaagtaa aagcgaagtt tcgcgtctac agctcgtatc tggaagcctt gtcggattac
    24181 gttgggctgt taacgcgtaa cccgcgctac gccgccgtga cgaccgccac gagtgcggag
    24241 cagggggcgc aggccctacg ggacgcgggc tatgccaccg atcctcacta tgcccgcaaa
    24301 ctcaccaaca tgattcagca gatgaaatcg ataagcgaca aggtgagcaa aacctacagt
    24361 atgaacattg ataatctgtt ctgaataact caagtccggc gggtcgctgc cgataatact
    24421 ctgtaattga aggcttataa ggaacctcca tgtccagctt gattaataac gccatgagcg
    24481 gactgaacgc ggcccaggcg gcgttaaata cggcaagtaa taatatctcc agctataacg
    24541 ttgccggata tacccgccaa accactatta tggcgcaggc caatagcacg ttgggtgctg
    24601 gcggctgggt tggcaatggt gtctacgttt ctggtgtgca gcgtgagtat gatgcgttta
    24661 ttaccaacca gttacgtgcg gcgcagacgc aaagtagcgg cctgactgcc cgctatgagc
    24721 agatgtcgaa aatcgacaat atgctctcca ccagtacctc ttcgctggca acacagatgc
    24781 aggatttctt caccagcctg caaacgctgg tgagtaacgc gaaagacccg gcagcgcgcc
    24841 aggcgctgat tgggaaatca gaagggttgg tgaatcagtt taaaaccacc gatcaatatc
    24901 tgcgcgacca ggacaaacag gtcaatattg cgataggtgc cagcgttgat cagatcaaca
    24961 attacgctaa acaaattgcc agcctgaacg atcaaatctc gcgcctgaca ggcgtggggg
    25021 caggggcgtc acctaacaat ctgctggatc aacgcgatca actggtgagc gaattaaacc
    25081 agattgttgg tgtagaagtc agcgttcagg atggcggtac ttataacatc acgatggcca
    25141 atggttactc actggttcag ggaagtacgg cgcggcaact ggcggcagtt ccttccagcg
    25201 ctgacccttc tcgtacgact gtcgcttacg ttgatgggac ggcaggcaat attgagatcc
    25261 cggagaaatt actgaatacc gggtcgctgg gcggcattct gacattccgt tctcaggatc
    25321 tggaccagac gcgtaatacg cttggacaac tggcgctggc atttgccgag gctttcaaca
    25381 gccaacacaa agccggattt gatgctaacg gcgatgccgg tgaagatttc tttgctatcg
    25441 gtaagcccgc ggttctgcaa aacacgaaaa acaaaggtga cgttgcgatc ggtgccacgg
    25501 taactgatgc ctccgcggta ctggcgacag attacaaaat ctcgttcgat aataatcagt
    25561 ggcaggtcac ccgccttgcc agcaatacca cttttacggt gacgccggat gccaacggta
    25621 aagtggcatt tgatggtccg gagttgacgt ttacaggaac gcctgccgtt aacgacagtt
    25681 tcacgctgaa accggtaagt gacaccatcg tcaacatgga tgtattaatc accgacgaag
    25741 cgaaaatagc gatggcgagc gaagaagatg cgggtgatag cgacaaccgc aacggtcagg
    25801 ccctgctgga tctgcaaagc aacagtaaaa cggtgggcgg tgcgaaatcc tttaacgacg
    25861 cttatgcctc gttagtgagt gatatcggta ataaaaccgc gacattgaaa accagtagca
    25921 ccacgcaagg taatgtggtg acgcagcttt ccaatcagca gcagtcgatt tccggtgtca
    25981 atctcgatga ggagtacgga aatctgcaac gttttcagca gtattacctg gcgaatgcgc
    26041 aggttctgca gacggcaaac gcgatttttg atgcgctgat taacattcgc taaggggaga
    26101 taaaatgcgt ttcagtaccc agatgatgta ccagcaaaac atgcgtggca ttaccaattc
    26161 tcaggcagaa tggatgaagt acggcgaaca gatgtcgacg ggtaagcgag tcgttaaccc
    26221 ttctgacgat cccattgcag catcacaagc ggtagttctc tcccaggcac aggcgcaaaa
    26281 cagccagtac acgctggcgc gtactttcgc cactcaaaaa gtgtcactgg aagagagtgt
    26341 acttagccag gtcaccactg ctatccagaa tgctcaggaa aaaattgtct acgccagcaa
    26401 tggcactttg agtgacgatg accgggccta gctggctacg gatattcagg ggcttcgtga
    26461 ccagttgctg aatctggcga acaccactga cggtaatggg cgctacattt ttgccggtta
    26521 taaaacagag actgcgccgt ttagtgaggc taacggtgat tatgtcggcg gaacagaaag
    26581 tattaagcaa caggtcgatg cttcgcgttc gatggtgata ggacatacgg gcgacaaaat
    26641 tttcgacagt attaccagta acgcggtagc ggaaccagac ggtagcgctt ctgaaaccaa
    26701 tctttttgcc atgctggata gtgccatcgc agccctgaaa acgccggtcg cggatagcga
    26761 agcggataaa gaaaccgccg ctgcggcgtt agataaaacc aaccgcggac tgaaaaactc
    26821 gctgaacaat gtcctgaccg ttcgcgcgga attaggcacg cagctgaacg aactggagtc
    26881 gctggattca ttaggtagcg atcgcgcttt agggcaaacg cagcagatga gcgatctggt
    26941 tgatgtggac tggaatgcaa ctatttcatc ttacatcatg cagcaaacgg cattgcaggc
    27001 atcgtataaa gcatttaccg atatgcaggg attgtcgctc ttccagctca acaaataagc
    27061 tcgctttaaa acatatcatg aaactgggta tgttttgtct gcctgctctg ggatcgccgg
    27121 ggcgggcatt tttttgccta ttttgcattg ttggttagca aggatgccat ttgatgaatt
    27181 ttaatatgtt gattcaaaca tgaaataaaa aagccctggc agttaccagg gcttgattac
    27241 ttgagctaat tattactcaa caggttgcgg acgcgcagga gcggcagagg catgatgcgt
    27301 tgccgtatga ccacctgcgg cacctttgcc ttcgaaggca aaagtagggc gctgccagtc
    27361 actgtgacgc ggtgcctccg gaacatattc cggtgctgga gcgcgcgtca ttggcgcggt
    27421 agcgtggtta tgctcaacgg tgacctcagg ttcaaccgca gctaccgttt caacttctgc
    27481 tgcgacttca gcgacgactg gcgcggcagg ttgagcaaca acttcaggtt cagcaactac
    27541 aacctcagca gtttcggcaa cttcttcaat atctgccgtc tcttcctgcg gttcaaccac
    27601 cggttctgcg acttcttggg ctacggcaac atcagactcg gtaatcacct gcggctgttc
    27661 agttaccgcg gcggcaatca cttcaggatg cgtcgtttca accacttccg gttgcggttc
    27721 ggcaaccggt acgggggctt ctacgacttc agccatttct tcaacaactg gcgcgctaac
    27781 aacaggttcg acagcggcgg cgacagggac ctcagtcacc atcggctgca cttgtacttc
    27841 ttcctgtttg cgctgctctt caacctgtac atcttgtgga cgtacaatcg gatagcggat
    27901 ccagactttg ccagaggcca gttccggaga cgcgcacgct acggtcaacg gcattgggga
    27961 ctgggttgga taacgctcgt cacgatagcg acgacgacgc tgaccactca cgcgcaggtg
    28021 acgaggcgag cggcgagaac gacgcggcat gccaccgttg tcacggttat cagcattgtt
    28081 ctcttcttgc tgttctggtg cagtttgcgc tacgactggc agcgggactt tcaccagttc
    28141 tgtgcgtgga gctggcgctt cctgaacaat tggttcggca gcgacagttt cttcaaccac
    28201 cggtgcgact accgcttctt cggctacgct ttgctcgtaa cgcactttct gattgagctg
    28261 acgctgttta cgacgcggct gaaccggacg tacacgttct tcctgttcgg tttcctgaac
    28321 agattgctct tcaacattca gcgccttcgc ttcttgttgc gcctgacgtt tatcatcgtt
    28381 acggcggcgg ctacgttcac gacgcggcgc ttgctgctcg tcggcggtac gcgctttttc
    28441 cgttacctca gcctgctgac ggctctcacg cgtctcggca gtctgctgct gtgcctggcg
    28501 acgattacga cggttttctt cgcgattatc gctgccttca gtacgttcac tacgggtgtc
    28561 gcggcgctca ttacggtcac ggcggttgtt ctgacgaggc ttgcgacgat cctgttgacg
    28621 ttccggtttc gcttctgctt tcggtgctgg ttgctcggtc ggtttggttt cttcaccacc
    28681 gctgaacagc gctttcagtg cgccgaagaa gcggctcaac agcccaggtt gtgcaggagc
    28741 tgctggtgtt gccggtgcag ctttcggtgc tggagctacg acaggcgcgg caggttcagt
    28801 tggtgttggc gctggcggca catccggcat ggcaaaggtt gccagcgccg gttgttccgg
    28861 acgcttacgt tcagcgaact cttcttcaga cggcagcgcc atcgcttctt catgcagctt
    28921 cggcagcatg tagcttaagg tcggcgtttc ttccccttta cgcacgcgca gcacgtggta
    28981 gtgcggggtt tccatctgat cgtttggcac aatcacgcag cgaacaccgt cctgacgcgt
    29041 ttcaatggca ttcaccgcag aacgtttttc attcagcaga taagaagcga ttggcacagg
    29101 aacaatggcg tgaacttcct gggtgttctc tttcagcgct tcttcttcga tcagacgcag
    29161 aatagagagc gacagcgatt cgttgtcacg cacggtaccg gtaccggagc agcgcgggca
    29221 gacgtgatgg ctggattcac ccagtgatgg gctcaggcgc tgacgggaca tttccagcag
    29281 gccaaagcga gaaatatggc tgatttgaat acgcgcacgg tcctgacgca ccgcttcacg
    29341 cagacggttt tctaccgcac gttggtggcg tactggcgtc atgtcgatga agtcgataac
    29401 aatcaggccg ccgaggtcac gcaggcgcaa ctgacgagca atctcatcgg cagcttcgag
    29461 gttggtgtta aacgcggttt cttcgatatc gccgccgcgg gtcgcgcgtg cggagttgat
    29521 gtcgatggca gttaacgctt cggtgctgtc gataacaatc gaaccaccgg atggcagacg
    29581 gacttcacgt tggaaggcgg actcgatctg cgattcgatc tggtagtggc tgaacagtgg
    29641 gatctcgcca gtgtacagtt tgattttgct gctgaaatcc gggcgaccta atgcagcgat
    29701 atgctgacgt gccagttcga ggactttcgg gttatcgata aggatttcgc cgatatcctg
    29761 gcgtaagtaa tcgcggaaag cgcgaacgat tacgttgctc tcctgatgaa tcaggaacgg
    29821 ggccgggcgg ctttcagcgg cttttttgat ggcttcccag tgtttcagac ggaagcttaa
    29881 atcccattgc agcgcctcag cagatttgcc gacgccagcg gtgcgcacga taagccccat
    29941 gccttccggc agttcaaggc ttgccagtgc ttcttttaat tcggtacggt cgtcgccttc
    30001 gatacggcga gaaatgccac ccgcgcgcgg gttgttcggc atcagaacca gatagctacc
    30061 cgccagactg ataaaggtgg ttaatgccgc gcctttgttg ccgcgctctt ctttatcgat
    30121 ctgaacaatg acttcctgac cttcacgcaa cacatcttta atgttgggac gaccatgagc
    30181 actgtagtta gcagggaaat attcgcgggc aatttctttt agtgggagga aaccgtgacg
    30241 ttcagcgccg taatcaacaa aagcagcttc cagactcggt tcaatgcggg tgattttacc
    30301 tttgtagatg tttgcctttt tctgctcgtg ccctggactt tcgatatcca ggtcatacag
    30361 acgctgccca tctacaaggg caacgcgcaa ctcttcctgc tgagttgcgt tgattaacat
    30421 tcttttcatc gtaacttact cattattctt acattgacga ctaagctgcg ggcaaagtaa
    30481 cgcctttccg ggtgtgaacc gatggcctcg tgtctagtcg cgtcgccaac ctcacggtta
    30541 tcgtcagctc aaagaggcgc agagtgtcgg ttgcccgttt ttcatgcgga aaaacagcgc
    30601 aattatcaaa gaaacagact gggtattact ctccagaaat atttccatct accggtaagg
    30661 actgcaaccc gcagcccgct aactgcctga aagatcaata cgtcttacgc cattgctgcg
    30721 tggatgatcg gtcgggcaaa atgggttatt ccgtaaaatt tcttgtttta acaaggatgg
    30781 acacggaaac ggcctcatta ttccactgca agccttgtta tagcaagatg acttttacca
    30841 tttatcaccc gcttactcac agttttttca cttcttgctg gtgattggtt taataaccat
    30901 caataaagtg atcacgtagt gaagtaataa ggtgcaaaac taaatataag catagaaaaa
    30961 tgagtggcgc gaatcctgtt ggctaattag aatcgcccac catgaaaaca gagactccat
    31021 ccgtaaaaat tgttgctatc accgctgacg aagcggggca acgtatcgat aactttttgc
    31081 gtacccaatt gaaaggcgta ccaaaaagta tgatttaccg tattttgcgt aaaggtgaag
    31141 tgcgggtgaa caaaaaacgt attaagcctg aatataaact cgaagcaggt gatgaggtgc
    31201 gtatcccacc ggttcgcgtt gctgagcggg aagaagaggc ggtttcgcca catctgcaaa
    31261 aggtggcggc gctggcggac gtcatcttat atgaagatga tcatatcctg gtgctgaata
    31321 aaccttccgg tacggcggta catggcggca gtggtttaag cttcggcgtt attgaaggtt
    31381 tgcgggcgtt gcgcccggaa gcgcggttcc ttgaactggt tcatcgtctc gaccgggaca
    31441 cctcaggtgt gttgctggta gcgaaaaaac gctcggcgtt gcgttctctg catgagcaat
    31501 tacgtgaaaa agggatgcaa aaagattacc tggcgctggt gcgcggtcag tggcagtcgc
    31561 atgtgaagag cgttcaagcg ccgttattga aaaatattct gcaaagcggc gaacgtatcg
    31621 tgcgtgtgag tcaggaaggc aaaccgtcgg aaacacgctt taaagtggaa gaacgctatg
    31681 catttgccac cctggtgcgt tgtagtccgg taacagggcg tactcatcag atccgtgtgc
    31741 atacacagta tgcaggtcat ccgattgcct ttgacgatcg ctacggtgac cgtgaatttg
    31801 accgacagct cactgaagca ggcacgggat taaatcgttt gttcctgcac gccgcagcgt
    31861 tgaagtttac ccatccgggg accggtgagg tgatgcgtat cgaagcgccg atggatgatg
    31921 gtttgaagcg ttgtttgcaa aagctgcgta acgcgcactg atacaaacat ataagcctaa
    31981 taatgggcgg ttggcctgat aaggcgttta cgccgcatca ggccgccagc accgattgcc
    32041 ggatgcgacg taaccgcatc cggcgtaaaa actatcccat cagcgggttt ttcccttccc
    32101 gacgtaacat ctgacacagc gcgattagcg gtaaaccaac cagcgtgtta gggtcacgcc
    32161 cctctaaacg ttcaaacagc gtaatgccaa atccttcact cttaaagcta cccgcgcagt
    32221 gc
//
LOCUS       DAJVTL010000039        31582 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.039, whole genome shotgun sequence.
ACCESSION   DAJVTL010000039 DAJVTL010000000
VERSION     DAJVTL010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 31582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31582
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.039"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(101..1399)
                     /gene="exuT"
                     /locus_tag="OQQ26_001714"
     CDS             complement(101..1399)
                     /gene="exuT"
                     /locus_tag="OQQ26_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexuronate transporter ExuT"
                     /protein_id="HCS1857193.1"
                     /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST
                     QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLA
                     VARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
                     HNWQMAFIISGALSFIWAMAWLIFYKHPCDQKHLTDEERDYIINGQEAQHQVSTAKKM
                     SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEITMFARMPMLFA
                     DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
                     GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSP
                     LFAVLAVFDLLGALVIWTVLQNKPAIEVAQETHNDPAPQH"
     gene            1882..3294
                     /gene="uxaC"
                     /locus_tag="OQQ26_001715"
     CDS             1882..3294
                     /gene="uxaC"
                     /locus_tag="OQQ26_001715"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HCS1857194.1"
                     /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
                     YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
                     WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
                     IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
                     QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK
                     TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
                     SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
                     QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
                     EMVKNICFNNARDYFAIELN"
     gene            3309..4796
                     /gene="uxaA"
                     /locus_tag="OQQ26_001716"
     CDS             3309..4796
                     /gene="uxaA"
                     /locus_tag="OQQ26_001716"
                     /EC_number="4.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
                     /protein_id="HCS1857195.1"
                     /translation="MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKF
                     ALTDIAKGANVIKYGLPIGYALADIAAGEHVHAHNTRTNLSDLDQYRYQPDFQDLPAQ
                     AADREVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLF
                     SHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPER
                     VHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITAN
                     PMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIA
                     HDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAP
                     GNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQL
                     IHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL"
     gene            4879..5430
                     /locus_tag="OQQ26_001717"
     CDS             4879..5430
                     /locus_tag="OQQ26_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HCS1857196.1"
                     /translation="MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVH
                     FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
                     TIVSTWALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
                     RMQKRGIDPFKVEKTPPAVDERG"
     gene            complement(5435..6679)
                     /gene="sstT"
                     /locus_tag="OQQ26_001718"
     CDS             complement(5435..6679)
                     /gene="sstT"
                     /locus_tag="OQQ26_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HCS1857197.1"
                     /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
                     LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
                     FALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL
                     LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDDRLANSALRN"
     gene            complement(7295..8260)
                     /gene="alx"
                     /locus_tag="OQQ26_001719"
     CDS             complement(7295..8260)
                     /gene="alx"
                     /locus_tag="OQQ26_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001098790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family membrane protein Alx"
                     /protein_id="HCS1857198.1"
                     /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
                     SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
                     AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGE"
     gene            complement(8543..9529)
                     /locus_tag="OQQ26_001720"
     CDS             complement(8543..9529)
                     /locus_tag="OQQ26_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417558.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCS1857199.1"
                     /translation="MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFAN
                     DFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKIHVICEKPLASNLAE
                     VDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYL
                     DGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMD
                     YGDFSVTLQHSKVSDSVLGSEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHI
                     NTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL"
     gene            complement(9608..10300)
                     /locus_tag="OQQ26_001721"
     CDS             complement(9608..10300)
                     /locus_tag="OQQ26_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HCS1857200.1"
                     /translation="MLRAFARLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNAS
                     KQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKN
                     YDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRA
                     IWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMI
                     GPFSEHGCPAKE"
     gene            complement(10377..10880)
                     /locus_tag="OQQ26_001722"
     CDS             complement(10377..10880)
                     /locus_tag="OQQ26_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HCS1857201.1"
                     /translation="MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD
                     KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL
                     SLGQDKI"
     gene            10965..12101
                     /gene="rlmG"
                     /locus_tag="OQQ26_001723"
     CDS             10965..12101
                     /gene="rlmG"
                     /locus_tag="OQQ26_001723"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HCS1857202.1"
                     /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
                     RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
                     YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG
                     PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM
                     PEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING
                     ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR"
     gene            12385..12699
                     /gene="higB"
                     /locus_tag="OQQ26_001724"
     CDS             12385..12699
                     /gene="higB"
                     /locus_tag="OQQ26_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin HigB"
                     /protein_id="HCS1857203.1"
                     /translation="MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAV
                     FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG
                     KK"
     gene            12696..13112
                     /gene="higA"
                     /locus_tag="OQQ26_001725"
     CDS             12696..13112
                     /gene="higA"
                     /locus_tag="OQQ26_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HigA"
                     /protein_id="HCS1857204.1"
                     /translation="MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLND
                     PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIG
                     SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID"
     gene            complement(13157..15175)
                     /gene="fadH"
                     /locus_tag="OQQ26_001726"
     CDS             complement(13157..15175)
                     /gene="fadH"
                     /locus_tag="OQQ26_001726"
                     /EC_number="1.3.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HCS1857205.1"
                     /translation="MSYPSLFAPLDLGFTTLKNRMLMGSMHTGLEEYPDGAERLAAFY
                     AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
                     LHTGLYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFARCAQLAREAGYDGVE
                     VMGSEGYLINEFLTLRTNQRSDQWGGDYHNRMRFAVEVVSAVRERVGNDFIIIYRLSM
                     LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL
                     KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLANAELLSKAQSGRADEINT
                     CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAMQKKNLAVVGAGPAGLAFAIN
                     AAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT
                     TDQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
                     DTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
                     KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGEPQVLAVDNVVIC
                     AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI"
     gene            complement(15346..17697)
                     /gene="ygjK"
                     /locus_tag="OQQ26_001727"
     CDS             complement(15346..17697)
                     /gene="ygjK"
                     /locus_tag="OQQ26_001727"
                     /EC_number="3.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HCS1857206.1"
                     /translation="MKIKTILTPVTCALLISFSPHAANADNYKNVINRTGAPQYMKDY
                     DYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQD
                     GKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
                     ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEY
                     QVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTSQEVSKEQMQIRDILARPAF
                     YLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVT
                     GRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDRVRPQDVGFVPDL
                     IAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWLAEMYPKLVAYHDWWL
                     RNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDS
                     LEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVASGGKRSDWTVKFAENRSQDGTLLG
                     YSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPATQ
                     YFYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLAPKEFN
                     TFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAK
                     GLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ"
     gene            complement(17714..18463)
                     /locus_tag="OQQ26_001728"
     CDS             complement(17714..18463)
                     /locus_tag="OQQ26_001728"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1857207.1"
                     /translation="MPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWW
                     GDFTPDLGYVIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYD
                     DKYTYPAMMNGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRAD
                     GLDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGGG
                     RFATAFDSRFYMKNASNDPSDQIFLMQYFYW"
     gene            complement(18464..18784)
                     /locus_tag="OQQ26_001729"
     CDS             complement(18464..18784)
                     /locus_tag="OQQ26_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005051010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857208.1"
                     /translation="MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSMS
                     SPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADH
                     DGNA"
     gene            complement(18918..20351)
                     /locus_tag="OQQ26_001730"
     CDS             complement(18918..20351)
                     /locus_tag="OQQ26_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1857209.1"
                     /translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF
                     LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS
                     LLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLM
                     LLLTLSYILLAGTALVGGVQPADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY
                     VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY
                     FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA
                     RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD
                     HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFA
                     WWKYSKYIKGLTAEERHIEATPASNVD"
     gene            complement(20414..20863)
                     /locus_tag="OQQ26_001731"
     CDS             complement(20414..20863)
                     /locus_tag="OQQ26_001731"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit beta"
                     /protein_id="HCS1857210.1"
                     /translation="MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDS
                     LTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK
                     GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
     gene            complement(20860..23951)
                     /gene="ebgA"
                     /locus_tag="OQQ26_001732"
                     /pseudo
     CDS             complement(20860..23951)
                     /gene="ebgA"
                     /locus_tag="OQQ26_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026199.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit alpha"
     gene            complement(24135..25118)
                     /gene="ebgR"
                     /locus_tag="OQQ26_001733"
     CDS             complement(24135..25118)
                     /gene="ebgR"
                     /locus_tag="OQQ26_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator EbgR"
                     /protein_id="HCS1857211.1"
                     /translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK
                     LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTN
                     CYEHSGLPDIKNVTGILIVGKPTPALRAAASALTDNICFIDFHEPSSGYDAVDIDLAR
                     ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS
                     SSGYELAKQMLAQEDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR
                     FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR"
     gene            25337..25668
                     /locus_tag="OQQ26_001734"
                     /pseudo
     CDS             25337..25668
                     /locus_tag="OQQ26_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417545.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
     gene            complement(25710..27089)
                     /gene="ygjG"
                     /locus_tag="OQQ26_001735"
     CDS             complement(25710..27089)
                     /gene="ygjG"
                     /locus_tag="OQQ26_001735"
                     /EC_number="2.6.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417544.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
                     /protein_id="HCS1857212.1"
                     /translation="MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKE
                     HVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPV
                     VVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKL
                     AKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFCHVPFGNIEAM
                     RTALSECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTG
                     MGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFG
                     GNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMA
                     IEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALA
                     AMRVSVEEA"
     gene            27507..29027
                     /gene="aer"
                     /locus_tag="OQQ26_001736"
     CDS             27507..29027
                     /gene="aer"
                     /locus_tag="OQQ26_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerotaxis sensor receptor Aer"
                     /protein_id="HCS1857213.1"
                     /translation="MSSHSYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFT
                     LQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM
                     VREGKISGYMSIRTRATDEEIAAVEPLYKALNSGRTSKRIHKGLVVRKGWLGKLPSLP
                     LRWRARGVMTLMFILLAAMLWFVADPVVTYFLCVLVVLLASACFEWQIVRPIENVARQ
                     ALKVATGERNSVEHLNRSNELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK
                     GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAM
                     TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
                     HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            complement(29132..29755)
                     /gene="nfeR"
                     /locus_tag="OQQ26_001737"
                     /gene_synonym="yqjI"
     CDS             complement(29132..29755)
                     /gene="nfeR"
                     /locus_tag="OQQ26_001737"
                     /gene_synonym="yqjI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NfeR"
                     /protein_id="HCS1857214.1"
                     /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHSHQHEHGQCCG
                     GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
                     TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
                     NPQMKRALDNFKAVLDLRVNQSDITDAQIKKIIAVIDRAAFDITQLD"
     gene            30043..30807
                     /gene="nfeF"
                     /locus_tag="OQQ26_001738"
     CDS             30043..30807
                     /gene="nfeF"
                     /locus_tag="OQQ26_001738"
                     /EC_number="1.16.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent ferric chelate reductase"
                     /protein_id="HCS1857215.1"
                     /translation="MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG
                     FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID
                     FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
                     LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQVVDARLAQMQIPADDYF
                     IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK"
     gene            complement(30861..30936)
                     /locus_tag="OQQ26_001739"
     tRNA            complement(30861..30936)
                     /locus_tag="OQQ26_001739"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30901..30903),aa:Ile,seq:cat)
     gene            31061..31567
                     /gene="mug"
                     /locus_tag="OQQ26_001740"
     CDS             31061..31567
                     /gene="mug"
                     /locus_tag="OQQ26_001740"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HCS1857216.1"
                     /translation="MVEDILAPGLRIVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA
                     GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ
                     ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD
                     QALVVRGR"
BASE COUNT         7643 a         8219 c         8310 g         7410 t
ORIGIN      
        1 aaccatcaat taaccctgca aagcggacaa acgctttttt ctatataaac gacgaagccg
       61 cctgataagg cggcttcgtc gttataactt acgttaaacg ttaatgttgc ggtgcgggat
      121 cgttatgtgt ttcctgcgcc acctcaatcg ccggtttgtt ctgcaatacg gtccagataa
      181 ccagcgcacc cagcaggtca aatactgcca gaactgcgaa cagcgggctg aagccgatgg
      241 tgtcagccag tgcaccgaca accagcgcaa acagcgtact tgccagccat gcggacatcc
      301 cggttaaacc gttcgccgtc gccacttcgt tacgaccgaa cacgtcagaa gagagcgtaa
      361 tcagcgcgcc agacagtgcc tggtgggcaa aaccaccgat acacagcagc ataattgcga
      421 catacgggtt ggtgaacaga ccgatcatac ccgggccaat catcagcaca gcacccagcg
      481 ttacgaccat cttacgggaa acgatcaggt tcacaccaaa ccaacgctgg aacagcggcg
      541 gcaggtaacc accgaggata caaccgaggt cagcaaacag catcggcatc ctggcgaaca
      601 tcgtgatctc tttcaggtta aagccgtaaa ctttaaacat gaacagcggg atccacgcgt
      661 taaaagtacc ccaggccggt tctgccagga aacgcggcag tgcgataccc cagaactgac
      721 ggttacgcag gatctgacca acggacattt tcttcgccgt gctcacctgg tgctgggctt
      781 cctgaccatt aataatatag tcgcgttctt catcggtcag atgcttctgg tcgcacggat
      841 gtttatagaa aatcagccat gccatcgccc agataaagct caatgcaccg gagatgataa
      901 atgccatctg ccagttgtgc atcacgattg cccataccac cagcggcggc gcaatcatcg
      961 caccaatcga agaacctacg ttaaagtagc ctactgcgat ggaacgctct ttcgccggga
     1021 accattcgga gctggctttc agacccgccg ggatcatcgc tgcttccgcg gcaccgaccg
     1081 caccacgagc aacagccagg ccaccccagc tacctgccag cgcggttgca ccacagaaca
     1141 cggcccacag cacagcaaac attgcataac cgattttcgt acccagcaca tccagtacat
     1201 aacctgctac cggttgcatg accgtataag cagcagaata ggctgcgatg atataggaat
     1261 actgttgggt ggagatgttt aactcttcca tcagagttgg cgcagctgcc gccacagtgt
     1321 tacgcgtcag gtaaccaagc acggtgccaa gcgtcaccag tgcgatcata taccaacgta
     1381 accctttaat tttacgcatg taaaacctca tcgttttgtt atatccgcag gaagcgcggc
     1441 catcatcccg ccagaggctg aagatgttag ttacgaccgg gtaaccgaaa aaaaaccggc
     1501 acgccccgaa cgttgccatg aaagtttcgt gctaattcgg cttccgtacc ggttaacccg
     1561 attcatctaa caaatgaatg aatcggcaat ttgcattccg tcgacttatg atttgcgacg
     1621 gcagaaagat aacttgtcat acaactttaa aaggtgagag ccatcacaaa tgtgcgaata
     1681 tttgtaggga cattacctga cgacagcgag gccagtactg gcgcggcctg cagcgagatt
     1741 taccactttg agagtaattt ttttaactac gtttattgat ctaactcacg aaaatatctt
     1801 cggactctgg aaattggtat gataactttg tcagcatcgc accataagca agctagctca
     1861 ctcgttgaga ggaagacgaa aatgactccg tttatgactg aagatttcct gttagatacc
     1921 gaatttgccc gccgtctgta tcacgactac gcaaaagacc agccgatttt cgattaccat
     1981 tgccatttgc cgccgcagca gattgcggaa gactatcgtt ttaaaaacct gtatgacatc
     2041 tggctgaaag gcgatcacta caaatggcgc gctatgcgta ccaacggtgt ggccgagcgt
     2101 ctgtgtaccg gtgatgcgtc tgaccgtgaa aaatttgacg cctgggcggc gactgttccg
     2161 cacactatcg gcaacccgtt ataccactgg acgcacctcg aactgcgtcg tccgtttggt
     2221 atcactggca aattgctttc tccgtcaact gccgatgaaa tctggaacga atgtaacgaa
     2281 ctgctggcgc aggataactt ctccgcgcgc ggcatcatgc agcagatgaa cgtgaaaatg
     2341 gtcggcacca ccgatgaccc gatcgattct ctggagcatc acgcagagat cgccaaagac
     2401 ggctctttca ccatcaaagt gctgccgagc tggcgtccgg acaaagcctt caacatcgaa
     2461 caggcgacct ttaacgacta catggcgaag ctgggcgaag tttccgatac cgacattcgc
     2521 cgctttgctg acctgcaaac tgccttgacc aaacgtctgg atcacttcgc cgctcacggc
     2581 tgtaaagtgt ctgaccatgc gctggacgtg gtgatgtttg ctgaagcgaa cgaagcggaa
     2641 ctggacagca ttctggcgcg ccgtctggct ggcgaaaccc tgagcgagca cgaagtggca
     2701 cagttcaaaa ctgcggtact ggtgttcctt ggtgccgaat atgcacgtcg cggctgggta
     2761 cagcagtacc acattggcgc gctgcgtaat aacaacctgc gtcagttcaa actgctgggg
     2821 ccggatgtag gctttgactc catcaacgac cgtccgatgg cagaagagtt gtctaagctg
     2881 ctgagcaagc agaacgaaga aaacctgctg ccgaaaacca ttctgtactg cctgaacccg
     2941 cgcgataacg aagtgctggg caccatgatc ggtaacttcc agggcgaagg tatgccgggc
     3001 aaaatgcagt tcggttccgg ctggtggttt aacgatcaga aagacggtat ggaacgtcag
     3061 atgacccaac tggcgcagct cggtttgctg agccgctttg tcggtatgct gactgacagc
     3121 cgtagcttcc tgtcatacac ccgtcacgaa tacttccgcc gcattctgtg ccagatgatc
     3181 ggtcgctggg tggaagcggg cgaagctccg gcggacatca acctgctggg cgagatggtg
     3241 aaaaatattt gctttaacaa tgcgcgtgac tacttcgcca ttgaactgaa ctaaggtctg
     3301 gggttgatat gcaatacatc aagatccatg cgctggataa cgtcgcggtc gctttagcgg
     3361 atttggctga aggcacagaa gtcagtgtcg ataaccagac tgttacgctg cgccaggatg
     3421 ttgctcgtgg acataaattt gcgttaacgg atatcgcaaa aggggccaac gtcatcaaat
     3481 atggcctgcc gattggttat gcattggcgg atattgcggc gggggaacac gtccacgccc
     3541 acaatacgcg cacgaatctg agcgatctgg atcagtatcg ctatcaacct gattttcagg
     3601 atctgcctgc gcaagcggca gatcgtgaag tgcagatcta tcgtcgcgct aacggcgatg
     3661 tcggggtgcg taacgagctg tggatcctgc caaccgtggg ctgtgtcaac ggcatcgcgc
     3721 ggcagatcca aaatcgtttc ctgaaagaaa ccaacaacgc tgaaggtacc gacggcgtgt
     3781 tcctcttcag ccacacctac ggctgctcac aactgggcga cgatcacatc aatacccgca
     3841 ccatgttgca aaacatggtg cgccacccga acgcgggcgc agtgctggtg attggtctgg
     3901 gctgtgaaaa caaccaggtt gccgcattcc gtgaaacgtt gggcgatatc gatcctgaac
     3961 gcgttcattt catgatctgc caacagcagg atgatgagat cgaagccggg atcgagcatt
     4021 tgcatcagtt gtataacgtg atgcgtaacg ataaacgcga gccaggcaaa ctcagcgaac
     4081 tgaagtttgg tctggagtgc ggtggttctg acggtctttc tggtattact gctaacccga
     4141 tgctggggcg tttctctgac tacgtgattg ctaacggcgg tactaccgta ctgaccgaag
     4201 tgccggagat gtttggcgca gagcagttgc tgatggacca ttgccgcgac gaagcaacgt
     4261 ttgaaaaact ggtgaccatg gtcaacgact tcaaacagta ctttattgcc catgaccagc
     4321 cgatctatga aaacccatcg ccggggaaca aagcgggcgg tatcaccacg ctggaagata
     4381 aatcccttgg ctgtacccag aaagcgggtt ccagcgtcgt ggttgacgtg ctgcgttacg
     4441 gcgagcgtct gaaaacgccg gggctgaact tgttaagtgc gccgggtaac gatgccgtag
     4501 cgaccagcgc cctggcgggt gcgggctgcc atatggtgct gttcagtact ggtcgtggca
     4561 cgccatacgg cggctttgta ccgacggtga aaatcgctac caacagtgaa ctggcggcga
     4621 agaaaaaaca ctggatcgac tttgacgcgg gtcagctgat ccacggtaaa gcgatgccgc
     4681 agttgctgga agaatttatc gacaccatcg ttgagtttgc caacggtaaa caaacctgca
     4741 acgagcgtaa cgacttccgc gaactggcga tcttcaaaag cggcgtaacg ctataaagtc
     4801 gaaatgagtt gttaataaaa aacggcgttt cataatgtga agcgccgttt gcttttccat
     4861 acctgataag gatttatcat gaccgcgtat tggctggccc agggcgtggg tgtcatcgcc
     4921 tttctgattg gtatcacaac atttttcaat cgtgacgaac gtcgcttcaa aaagcagctt
     4981 tcggtctata gcgccgttat tggcgtacat ttttttcttc tgggcaccta tcccgctggt
     5041 gccagtgcca tccttaatgc cattcgtaca ttgattacct tacgcacgcg cagcttatgg
     5101 gtaatggcga tttttattgt gctgactggc ggaattggcc tcgcgaagtt ccatcatcct
     5161 gtcgaactat tgccggttat cggtacgatt gtcagtacct gggcgctgtt ccgctgtaaa
     5221 gggctcacca tgcgctgcgt gatgtggttt tcaacgtgtt gctgggtgat tcacaacttc
     5281 tgggcggggt cgataggcgg cacgatgatt gagggtagtt ttctgcttat gaatggcctg
     5341 aatatcattc gtttctggcg gatgcagaaa aggggaattg atccgtttaa agtagagaaa
     5401 acccctcccg ccgtagacga aaggggttaa acaattaatt acgcagggcg ctatttgcca
     5461 gacgatcgtc ttccgcttgg caagctgccg cagtgaacag cacgtcagtt gaagagttca
     5521 gcgcggtttc gcaagagtcc tgcaatacgc cgatgataaa gccgacggca accacctgca
     5581 tggcgatatc gttcgaaata ccgaacatat tacaggccag cgggatcagc agcagagaac
     5641 cccccgccac gccggatgcg ccacaggcac acagagaagc caccacgctc aacagcagcg
     5701 ccgtgggcag atcgaccggt atacccagcg tattaaccgc agccagcgtc aacacggtaa
     5761 tggtgattgc tgcgcccgcc atattgatgg tggcacccag cggaatagaa acggaatagg
     5821 tatcgcgatc cagattcagc ttttcacaca gtgccatatt caccggaatg ttcgccgcag
     5881 agctgcgggt gaagaaggca tacacgccgc tttcgcgcag gcacagcagc accagcggga
     5941 acgggttacg acgaattttc caccacacca gcaatgggtt aaccaccagc gccaccagta
     6001 acatacagcc aaccagcacg accagcagtt gcgcgtagcc ccacagtgtg gagaaaccgg
     6061 tggttgccag ggtagaagaa accagaccaa aaataccaat cggtgcgaag cgaatgacca
     6121 gtttcaccat aaaggtgacg gcattcgaca tatcgttgac caggtttttg gtggtctcgt
     6181 taccgtgacg cagtgcgaaa ccgaggccaa ttgcccacac caggatcccg atgtagttac
     6241 ctttcagcag cgcgtcgatg gggttggaaa ccatgctcat tactagcccg cgcatcactt
     6301 ctacaatgcc tgacggtggc gaaatatcac ccgcgctact ggataagtgc agggtagaag
     6361 ggaaggcgaa gctgaaaacg actgcggcca gagcagcaga gaaggtaccc agcagataga
     6421 ggaacaaaat agggcggata ttggttttct gcccgtgctg gtggttagca atagatgcca
     6481 tcaccagcat caacaccagg atgggggcaa cggctttcag tgcgccgacg aacaaagtac
     6541 ctaacagacc aacagcttcc gccgcgggtt ttgagatcca tgccagaaga atccccagaa
     6601 caaggccgac caggatttgt tttaccaggc tgccatgagc cagacgccgg aatagccccg
     6661 gtgaacgttg cgtagtcatt tttcgatcct ttcattgtgt tgtcgcacat ccctggtgcg
     6721 ttctgtcgac gcatctttca ggatgtaaca aagtgtttgc aagatcgagt ataaggaaag
     6781 ttacagcttc gggaagcgaa aaatgctgga ttttaaagag aggtcatatt ttgcaactta
     6841 atggttacat ttgtttgaca taaacagagg gaaggactgg ctactaaggc tgattagata
     6901 acatatgggc aaaactattt ggaatatgag aacggttgcg ctcctttaat gtgctatgcc
     6961 atataaagtc actggcgcag ggagcgcgca gggggcggcc aatcgccgcc gccccctgca
     7021 cccccaggct ctggcgaaca aaatcgccgc tgcgcggtac cctcagctta tcccttgcgg
     7081 ctatcgggtc gggcgcgagg gaacgtccct gtaagatgcg ccctcgccgc gcatccatgc
     7141 gcgtcgcccc ggcctccagg gaacgcttcg gcgattttga cgccaccaac acccgtgcgg
     7201 tctttttgta aagagctaca agccgattac ataattaata gctcaccttt gtctggaatg
     7261 agttatctct aggaatggct taatatacag cgaatcattc tccccgctgc ttatcatgcc
     7321 gataattcac ccaggcgttg ataataaacg tcatcaccag aatgccaaac accacgccca
     7381 gcgagacggc gattggaata tggtagaagt cgacaatcag catcttgata ccgataaaca
     7441 ccaggatcac cgccaggcca tatttgagca tcgagaaacg ctctgctacg cccgccagca
     7501 ggaaatacat cgcacgcagg ccgaggatcg caaacaggtt tgaggtcagc acaatgaacg
     7561 ggtcagtggt cacggcgaag atagccggaa tgctatccac ggcgaaaatc acgtcgctca
     7621 attccaccag aatcagtacc agcatcagcg gtgtggcgta cagcaatcca ttcttacgca
     7681 caaagaaatg ctcgttgtcg atggtgtcgg tcatgcgcaa atgaccgcgt agccagcgca
     7741 ccagcggctt gtcgccaatg cctgattcat cttcatgggc gagcgccatc ttcacgccgg
     7801 taaacagcag gaaggcaccg aagatataca ggatccagtc gaactgcgaa attagccagc
     7861 tgccagtgaa gatcatgatg gtacgcagaa caatcgcccc gagcacgcca tacaccagca
     7921 cgcggcgttg taatgccgcc ggaacagaga aatagctgaa caacatcagc cagacaaaga
     7981 cgttatcgac cgccagcgat ttctcaatca gataacctgt gagaaaggcc agtgcctgtg
     8041 gatcggcaac ggcgcgacct tcggtttgca ccagatacca ccagaaagcg gcgttaaaca
     8101 gtaacgacag cgtcacccag accagcgacc aggccgcagc ctgtttcatg gtcatggcat
     8161 gtgccccacg acgcccctgc aacaacaggt cgatagccag cataatggcg acaacaacag
     8221 cgaatccgcc ccatagcaac ggcgtgccga cagtattcat agaagttcct tacacataaa
     8281 aaaacggcca acgtcggaag acgtcagccg ctgcttttta tgcatagacc tcgccttccg
     8341 gcaaggtctc acttacaaca aaaaaggaat acgtctgcgt attcctttcg ggttgcccgg
     8401 tgaccgaatg tggtttttca cacatcgtaa tgacgatcga ccggcaatga agttactccc
     8461 ctttgcaggt aacaaagtat gacagaccat tcagccagtc aatggtctgt tacatacctt
     8521 ttacactgtt ttactttggc aattatagtt ttacgctatc tgccggaaaa atcaccccag
     8581 tctggcggcg gatctcggtc agcagtttgg cggtgatgcg actgaccgcc aaccctggat
     8641 gatccaccag atgctcatcc accagggtag cgaacagctc tgcttcgtag agcatggtat
     8701 taatatgctg cggctgggtg agatcctgca tctggctgcc acgcggcaca aagcagactt
     8761 tctggcattc agacagtttt tcaatcacca gcgatcccgc ttcgccctga atctcgcttc
     8821 ccaggacaga atcactgacc tttgagtgct gcaaggtgac gctgaaatca ccgtaatcca
     8881 tcaccaccac gccgtgggcg tcaacgccgc ttgccagcaa actcgccgtt gcctgcacgc
     8941 ttttcggctc accaaataac gccaccgccg acgccaggca gtaaaagccg atatccataa
     9001 ttgaaccgtt agagaatgcc ggattaaagg tgttgggatt ctcaccgtcc aggtaacgtt
     9061 gataccgcga ggaatactgg caatagttga aaaagacttt acgcagtttg ccgactttcg
     9121 gcaacgcctg gcgcagcaaa tgaaagttcg gcaggcaggc ggttttaaat gcctcaaaca
     9181 gcaccacctg attttcccgc gcacaggcaa tggcggcatc cacttccgcc agattcgacg
     9241 ccagcggttt ttcgcaaatc acatgaattt tatggctaag gaaaagttgt gtctgggaaa
     9301 agtgcaggga attcgggctg gcaatataca ccgcgtcaat ggcatcgctt tccgccatcg
     9361 cttccaacga cgtaaacaga tgttcgacag aaaaatcatt ggcgaagtgc tgggcctgct
     9421 caaggctgcg ggaatatacg gcggttaact tgtatttacc gctctcatgg gcggcctcga
     9481 cgaactggcg agtgatccag ttcgtaccaa tcacagcgaa acgtatcata acgcgtggat
     9541 actccataaa gggattctgt cgtcaatgta gcacgccttt ttcatcttcg acgtgcgcag
     9601 atacgcatta ttcttttgcc ggacagccat gctcactaaa cggcccaatc atgaccgatg
     9661 gcccgagata tttcggctgg cgatggagga ttttggcgtc aattacggcg ctgacacgag
     9721 cgagtttctc ccgcagttga gtataaaaac cgtgcttcat attgaggtca ggcgcgttaa
     9781 aaccgatagc gtcgatgccg tactgttttg ccagccagat ggcgcgttga ttatgaaatt
     9841 cttgcgagat aatggtgata tggttttcac caaaaacctt tttggcacgc actaccgaat
     9901 ccagcgttga gaatccggca tagtcgcaga agatcacttt cgccggtacg cctttagcga
     9961 tcaaagcctg ctgcatacct gaggcttcat cgtaattttt acgtccgtta tcgccactta
    10021 ccagtagcca tttcactttt ccggcgtggt acaacgctgc tgcggtatca atacgtcggg
    10081 taaagtagcg attacccggc ctcgccccca gcaataaacc cacgttacgc gccggaacgg
    10141 cgttgacatc gctccaggtc agctgcttgc tagcgttgac cataacgcga tcggcaataa
    10201 aaatggtcgc tcctgccaca agtaacagta agcaggcaat ctttagagtc cggcgagaaa
    10261 aacaaatacg gagaagaagg cgggcaaatg cgcgcagcat ggtcgttatc cttaacgaaa
    10321 ggggggaggt cgattttagg cgctaaagaa agaaaagata acgcctgaca tcattttcag
    10381 attttgtcct gcccaagcga caactgcgtt agccacagcc gggtgtcgaa ctcaagctgg
    10441 tggtactgcg gctccatatg gcagcacaat tgatagaacg ctttgttatg ctctttctcc
    10501 ttcaggtgcg ccagctcgtg caccacgatc atgcgcaaaa acggttccgg cgcgttgcga
    10561 aacacggtag cgacgcggat ctccgctttt gctttcagct tgccgccctg cacacgagaa
    10621 acagcggtat gtaacccgag cgcgtttttt agcacatgga tcttattgtc atacatcact
    10681 ttattgatcg gcggggcatt acgcagaaac tgatttttca gatcctgagt atattgccag
    10741 agggctttat cggtggcgta gtcgtgtgtt cccggatagc gttttgccag cacatcgccc
    10801 agacgctgtt cgttaatcag tgttcgcacc tgggaaagta gctgctcggg gtaaccctga
    10861 agataagtaa gattgctcat aaccgcccac gaaaaagaga aaaagggtat actcacgcac
    10921 ccttttcaag ggcaacgtcg aaattttatc attcaggagg gccgatgagc cacttagaca
    10981 acggtttccg ttcactgaca ctacaacggt ttccggcgac ggatgacgtt aacccgctac
    11041 aggcgtggga agcggcggat gaatatttgc tgcaacagtt ggacgacaca gaaatccgcg
    11101 gcccggtgtt gatcctgaat gatgcctttg gtgcgttaag ttgtgcgctg gcggaacata
    11161 agccgtacag cattggcgac tcatacatca gtgaactggc gacgcgcgag aatttacgcc
    11221 taaacgggat tgatgagtcg agcgtgaagt ttctcgacag caccgccgac tacccgcaac
    11281 agccgggtgt ggtgctgatc aaagtgccga aaacactggc attgctggaa cagcaactgc
    11341 gtgcgctgcg caaagtggtc acgtcggata cacgtattat tgccggtgcc aaagcccgtg
    11401 acattcacac ttccacgctg gagctgttcg agaaagtgct cggcccgacc accactacgc
    11461 tggcatggaa aaaagcgcgc ctgattaatt gcactttcaa tgaaccgccg ctggccgatg
    11521 cgccgcagac cgttagctgg aagctggaag gtactgactg gactatccac aaccatgcga
    11581 atgtcttctc ccgcaccggg ctggatattg gcgcacgctt ctttatgcaa catctgccag
    11641 agaatctcga aggtgagatt gtcgatctcg gttgcggtaa tggcgttatt ggtctgacgc
    11701 tgcttgataa aaacccgcag gcgaaagtgg tgtttgtcga tgaatcgccg atggcggttg
    11761 cttccagccg tttgaacgtt gaaaccaaca tgccagaggc gttagatcgc agcgagttta
    11821 tgatcaacaa cgcgctctcc ggcgtggagc ctttccgctt taatgctgtg ctctgcaacc
    11881 cgccgtttca ccaacaacat gcactgaccg ataacgtcgc ctgggagatg ttccaccacg
    11941 cccgccgctg cctgaaaatc aacggcgagc tgtatatcgt tgccaaccgt cacctggatt
    12001 acttccataa actgaagaag attttcggca actgcaccac tattgcgacg aataataaat
    12061 ttgtggtgct gaaagcggtg aagctgggac gtcgtcggta agattgacag ttacctgccg
    12121 gatgcggcgt aaacgcctta tccggcctac gttcagcacg ttaccccagg ccggataaga
    12181 cgcggcaagc gtcgcatccg gcaatgtctg cccagttctg gaatcgcgct tccataaaac
    12241 aaaaaatccc tgtcaccatc ctctacattc tcttgtttag cgtttttcta cgtttattct
    12301 tccgtcacac agataaattc atccgttgcc aatctggcaa cggatgttat catattgcca
    12361 atttgtcaac ggacgtgatg aagaatgcac ctgataactc aaaaagcatt gaaagatgct
    12421 gcggaaaaat acccgcaaca taaaacggag ttggtggctc tggggaacac gattgctaag
    12481 ggatatttca aaaaacctga gtcattaaaa gcagtattcc catctctgga taacttcaaa
    12541 tatctggata agcattatgt tttcaatgtt gggggcaatg aattacgtgt tgtagcaatg
    12601 gtcttttttg aatcgcaaaa gtgctacata cgtgaagtta tgacgcataa agaatacgat
    12661 ttctttaccg ctgttcatcg tactaagggg aaaaaatgat tgcgattgcc gacatcttgc
    12721 aagcaggaga aaagctaact gctgtggcac cttttctggc gggtattcag aacgaggaac
    12781 aatacaccca ggcgctggaa ctggtagatc atctgctgct caacgatcct gaaaacccct
    12841 tgctggatct ggtgtgtgcc aaaataaccg cgtgggaaga atcagcgccc gaatttgcgg
    12901 aatttaatgc catggctcaa gccatgcctg gcggtatagc cgtgattcgt acccttatgg
    12961 atcaatatgg tttaaccctt tccgatctgc cggaaattgg cagtaaatct atggtgtcac
    13021 gcgttttgag cgggaagagg aaattaacgc tggaacacgc taaaaaattg gcaacgcgat
    13081 tcggcatttc tcccgccttg tttattgatt aacgcgacgt gccggatgcg ttgcatccgg
    13141 cgcttcaaat aacgatttaa atctccagcg ccagccgtgt tccctgggca attgcccgtc
    13201 gtgcgtccag ctccatagct acatcgcaac cgccaattaa atgcaccgtt ttcccgctat
    13261 caatcagcgg ttgcgccagc gcgcggtttg gctcttgccc tgcgcagatc accacattgt
    13321 ccactgctaa tacctgcggt tcgccgttga tcaccacatg cagcccgtca tcgtcgatct
    13381 tctgataact gacgcctggg atcattttca caccgcgcga gagtagggtg gtgcgatgga
    13441 tccagccggt ggttttgcct aacccctgtc ccggtttgct ggctttgcgc tggagcatca
    13501 caatttgccg tgggctacgc gggatctgca ttccctgcgg gcttaagcca ccagcctgtt
    13561 gtaggctgct gtcgatcccc cattcattac agaacccggc gatattctgg ctggtggatt
    13621 cgcccggttg acttaaatac atcgccgtat caaaaccaat cccgccacaa ccgatgatgg
    13681 caactttgtt gcccaccggc gctttgtcgc gcagtacatc gagataactc aataccttcg
    13741 gatgatcgat cccgtcgatg ggcggagtgc gcggcacgat cccactggcg aggatcgttt
    13801 catcgaacgc ctgtaactga tccgtcgtca cggtgtgatt gagttttagc gtcacgcccg
    13861 ttacttcgat catccggcgg taatagcgca gcgtttcgta aaactcctct ttgccgggga
    13921 tctgtttggc gatattaaac tgcccgccga tctcgctgtg ggcatcaaac aatgttacct
    13981 gatgcccacg cgccgccgcg ttaatggcaa acgccagccc agctggtccc gctccgacca
    14041 ccgccagatt ttttttctgc atggcgggaa ggatcggcat tttggtttca tggcaggcac
    14101 gaggattcac caggcacgag gtgactttgc caacgaagat ctgatcgagg caggcctggt
    14161 tgcagccaat gcaggtgttg atctcatcgg ctcgccctga ttgcgctttt gacagcagtt
    14221 ccgcattagc gagaaacggt cgcgccatcg ataccatatc ggcatcgccg cgcgagagaa
    14281 tatcgtcggc aacctgcgga tcgttaatcc ggttggtggt taccagcggt agcgagacgt
    14341 ggcctttcaa tttgcgcgtg acccagctaa atgcgccgcg cggcacgggc gtggcaatgg
    14401 tcggaatacg tgcttcatgc cagccaatgc cggtgttgat aatggtcgcg cccgccgctt
    14461 caatggcctg cgccagctct accgtttcgg caaaagtccc gccgtcttcg accaagtcga
    14521 gcatcgacag tcggtagata ataatgaagt cgttgccaac gcgttcgcgt accgcactca
    14581 ccacttcaac ggcaaaccgc atccggttgt ggtaatcgcc gccccactgg tcactgcgct
    14641 gattggtgcg cagcgtcaga aattcgttga tcaaataccc ttcggaaccc atcacctcta
    14701 caccgtcgta tcctgcctcc cgcgccagtt gcgcgcagcg ggcgaaatcg tcgatcagtt
    14761 gcaggatctc ttcatgggtg agttcatgag gaacgaaacg gttgatgggg gcctgcaatg
    14821 cggagggagc gaccagatgc ggttggtagc tgtagagccc ggtatgcaaa atttgtaagg
    14881 caattttgcc gccttcctga tgtacggctt cggtaatggt gcgatggtgt gggatctggc
    14941 tggcgtcatt gagcattgcg ccaccttcca tgccgacgcc tgttaaatct ggtgcaatgc
    15001 cgccgctaac aatcagcgcc acgccgtgac gggcgcgttc ggcataaaac gcagccagcc
    15061 gttcagcacc gtccgggtat tcctccagcc cggtgtgcat tgaacccatc aacatgcggt
    15121 tttttaacgt ggtaaaacct aaatccagcg gggcgaacag cgacgggtag ctcataaaat
    15181 tgtccagtat gtaaaataat tgttatgtgg tcggatgagt tctaatttag ccgtcgccgg
    15241 agaaaaggga aaaggggagt gcggggtttg tgatgggatt caaaaagaat acgcccgttc
    15301 gtcatgccgg acggcggtaa tacagtcgtc cggcatcggg agaaattact gcttacggaa
    15361 aaaatcgtta tacaacatat acaaatgcgc ggcactccag gagaaatttg gtgcgccttg
    15421 ctgtgcgcct gtcagcgggt tgtaattttc ctgaattggt ccatcggcgg ttaacccttt
    15481 ggcgtgccgg aagaacgtat ccgccagctt cagggcatca tcgcgataac cgtaacgctc
    15541 catccctttc agaccaaacc agaactgatc cacccatacg cgcccgcgcc agtagatatc
    15601 cgcgccaaag gccgggttgg ttaacgctgc cgttcccagc gggacaaagg tgttgaactc
    15661 tttaggagcg agcatcacct tcaccaccgc gtcggcgttg gcctgcgttg ccgcaccgtt
    15721 aaacagcggc gaccagcctt ccggcccttt accgcgctca acaatcggtt tgcccgcgca
    15781 gccgttcgcc agtggtttat cttcaatacg cacgtcatag aagtactgcg tagccgggtc
    15841 gaacatacag gtgttgatgt agtccgcgag ctgctgtgcc aactggcgat agcgcttagc
    15901 ttcttccggt ttaccgagaa tcgtcgccat ctccgccaga taatggttat cgctgtacat
    15961 atagctggcc tgatccaccg actcctgcaa tagcgagtac cccagcaacg ttccgtcctg
    16021 actgcggttt tcggcgaatt tcaccgtcca gtcgctacgt ttgccgccgc ttgcaacata
    16081 tttatccagc tgttctttgt cgataaaccc aaagacggcg gcatcatcac gccccgattc
    16141 ccacgacgca gcaacctgtg ccggaatttc cagactgtcg tactggcctt tctccaccac
    16201 gcgggcgtag ttgttcagcc cagactgcgt ctcttcttta tcgccttttt tcaccgtaaa
    16261 cagcatctcg ccgctctcag tgttgtgggc tttgtcgcgg gtcgcgccat attccggcac
    16321 gccgttgccg ttgtgatcgc ggttacgtaa ccaccagtcg tgataggcca ccagtttcgg
    16381 gtacatctct gccagccagg ttttatcctg ggtgacgtta tacacttcca tcaccgacca
    16441 ggcggcaagg ctgggtttgg tattacgttc gttccagttg ccgccatcgc caccacgctc
    16501 ggggctaagg ttccacgcta tcaggtcggg gacaaagccc acatcctgcg gacgcacgcg
    16561 gtcgcctggc tggatctgcc aggagaagac cgcgcggata ttctctttgg cgatatccgg
    16621 attgaaatgc gccatcgcaa acgcctgctt ccaggtatcc cacggccagg tctgattgcc
    16681 ggagaaccag cgtccggtca ccgacggtgt gacggtgtta aatttcaccg ccccgccagg
    16741 cgaacgccag ttaccgttga gcgtttcgat cgctttcacc gcgacgcgcg tctgttccgg
    16801 cgtcgcatcc ggattggtta accctttctt cagatactct tcccagcgtt gctgcgaggc
    16861 ggtgagataa aacgccggac gcgccagaat atcgcggatc tgcatttgct ctttgctaac
    16921 ttcctgagag gtcagcagat gggaataggt ggtatagagc gtcgtcgaac cgttgatatg
    16981 tgccttactg gtaaagcgat tgccgttgat ttcagtctgc accggcaggg atttatgcac
    17041 ctgatattct gattcaccgg aggtcagcag atcccaggtg gcgcgcactt tgccaaaggt
    17101 gactttcagg ccatcacggg tggcgctgat ttttcgctgg tagtcagggt attcgccagc
    17161 aatggtttta tcggaaagcg gtttcccttc tttcgcttcc agtttttcca gcagttcgcc
    17221 atcccacacc agatccagcg gtttattgct gatgatttta gtttccagta gtgacgtgcg
    17281 cggcgtggcg aagcgcagag tcatttcgac ctgcacatct tttgctgtca gtttttgcac
    17341 cagcgcgccg ggaatactgt atgcctccag cgtgaagtcg actttcttgc cgtcctgcca
    17401 gacggtcagg cggtcgaaat tgctggccat aaagttgatg tactcttccg tcagcagcgc
    17461 aacgcctgga aaaccgccca tggtgttagg gccgtctggc aacagatgac catgccaggc
    17521 tccgagatcg aaaaacggat taaaacgctg gtgatcgtcg taatcgtaat ccttcatgta
    17581 ctgcggcgca ccagtacggt taatcacgtt tttataattg tcggcgttag cggcatgggg
    17641 ggaaaaactt atcagcagag cgcaggttac tggcgttaaa atagttttga ttttcatgaa
    17701 attacagtcc ttattaccag tagaaatatt gcatcaggaa gatttggtcg ctgggatcgt
    17761 tagaggcatt tttcatgtag aagcggctat caaaagccgt tgcgaaacgt ccgccgccat
    17821 attcgtacca gataccaaac tgcatgaaag aggtggtttc atcgtcagcg tggtcagggc
    17881 gatgtttggc gtaggtgtaa gcggtggaga gataaacgcc ctttaacgct tcatacatgg
    17941 cgctcaccat catcccgctt tcacttcccg gtacgtccag cccgtcggca cgtccggtat
    18001 ggtgccaggc gcgagcggca aagttagggg taagcaggcc cgtgagatag agttgtcctg
    18061 tgccgtcggt aatttccaga ccattcatcc aggtgatgcc ttcggcaagg tcatactgga
    18121 tgtaaccgtt catcattgcc ggataggtgt atttgtcgtc gtagcgatcg tacttgccaa
    18181 aatgtagcca tgctttgctt tcgtcatgat gtccggcagg tgtggcggtg acgctataac
    18241 gaaagttgcc gcttaagttc tgcaccttca gcgcggtcat aatgtcgcgg gtattgggaa
    18301 tgacgtagcc cagatcgggt gtgaagtcgc cccaccattg caggtcatcc agcgaggaat
    18361 cctgacgcag actgagcatg atttcggtgc catcattggt acgataaccg ccatagaaac
    18421 ggttaatccc accttcgaaa ccaccccagc tatggtcagg cacctaggca ttaccgtcgt
    18481 ggtcggcctg cacggtccag ccttcgccat aaatcaggcc gaaccaggag ccgtacttca
    18541 tctccaggcc accttcaata taggtgccgt cgctgtattt atgtttattc tcaccctcta
    18601 aatccatata tccaccaacc cctaattcgc cgtaaaaacg aaatgaagga gaagacatcg
    18661 aggtaatagc gggcgttttt gtgtcgtcat gttctgccgg acgtgcttct tctcctgccg
    18721 cagaaaaggc gtagcaaaac ggcagagcaa gtaatgctct gcatggtgca gtgattaatt
    18781 tcattgtgtt aatccatgag ctaaagaaaa aatacagcct tttatcgttg taattataaa
    18841 aatataaagg cagaaactat ttttcctctc cccatccagg aagagggaaa atgcctgctc
    18901 attttttatt attctgctta atcaacattg ctggctggcg tcgcttcaat atggcgctct
    18961 tcagccgtta atccctttat atatttactg tatttccacc acgcaaagcc gaggaagata
    19021 acaataccgc cgacgttata aaaaatgatg gtcagaatat tcgcgccagt cgggaatgtc
    19081 gaagcgacaa accctacggc aaatatcgca atcagcattg aaacaacgat aataccggtg
    19141 cggcgggagc ccatacggaa atcgcgtggc aggtgatcta atttggcgcg taaattcagg
    19201 taagccagca tgatgaataa cggcggaagc atggacgctg cggcggtcat attaataata
    19261 gtattcatca gatcctgcac ggtattggaa ccgagcattg ggataatcat cagcgggatg
    19321 acgatcagga actggatcca cgctgcgcgc gccggaacgc cgttttcgtt cagttcgacg
    19381 gttttcttac caaagatgcc ttccgggatt tcggagaaga aaattttcac cggcgttgcg
    19441 gtccacatca gcagggaacc gaacatcgcg gtaaaggaca ccagaccgac aaagcgattc
    19501 atcaacgctt ccggtagacc aaaatacgcc gccatgccgt ggaatacctg caccgatccg
    19561 ccggtaaatt tcaactcttt gctgctgacg aagacgttaa tcagcaccga ggagacggaa
    19621 tacagtacgc cgataaaaat cccggcgagg atgatcactt taacgaacga tttcgaaccg
    19681 cctttgacgt cgttaacgta cacagcgacg gactccgcgc cacctgcggc cataaagatc
    19741 caggtggtaa cgccgaggaa cgcccagttg aagttcggga tcatcgcgtc aacggtgatg
    19801 gggtcagcag gctgtacgcc gccaaccagc gccgtacctg ccagtaaaat gtaggagagc
    19861 gttaacagca gcatcagcgt tgaagtgacg gaggtaattg gccccaacat tttcgccccg
    19921 ttggtggaaa cccaggtgga gaaggcgaac agcaccatac tgataatggt ggtggcaacc
    19981 ggcgtcataa tatattcgta tccgaggaag gcatacgaag cataagcaat aacgcgcggc
    20041 aacagtgagg tgaaaaagaa caggtttacg aaccagtagg tataggcagt aataaatgcc
    20101 caacgtccgc ccagcgaact ttttacccac gcgtagacac cggcttctga gtttttattt
    20161 aacgaaacaa attctgcgat gatcagacag aagggaataa aataaaaaat cgtcgcgagg
    20221 aaaaacatcg gtgccgaggc cagtccaagc tcaatattat tattgataac gttgttaaag
    20281 ctgtaaacgg cggcaaaagt cagcgagagc aagccgaatt tgccgattgt attacgtttg
    20341 gtatcagaca taacacatct ccgaaaatgt gtagggtagc ggtggcggca aactcctttt
    20401 gccgccgtag ttgttatttg ttatggaaat aaccatcttc gatggtgact ttgagaacca
    20461 cttttttgac cgcgttattg cagataaacc gatacgcttc atggatatcg caaataacga
    20521 tttgcccttc gtggacctca acggtttctc cgcagccttt taaatattca cggtcagttt
    20581 catcacgata atattccact acctgtaatg tctctttcgg cgcatattca attttttgct
    20641 gcccttgcag gtagtaatgc acttcaaaat agcgtcgatg cccggtaaat agcgcatcgg
    20701 tcgcggagtc tgtctccacg cggtaagtca atgagtcacc gatggagtgg gcgacgccag
    20761 gctgaatgtt gtcgatattt tcaatcgctt caacgcagcg ttgccacttc ttgccagagg
    20821 cgtaaatctg gcggaactgt tctaagttat cgatgatcct cattgcttat tctcgctgtg
    20881 caaattcgtg gaaaagaacc ctgcgccgaa ctcatacgac gccaggcttt gcgcggtagc
    20941 ttctccgcca gaaaccggca gcaacgtaaa gccgtagctg aagtcacgga accagacgcg
    21001 ccaggagtcc agcacctcgc tgccccagga gttggagccg aggccaagta gctggtggtc
    21061 gaggttcagg gtgatgtcat cactgcgctg cagctcgtta cagtgctggg cagcgtggat
    21121 gttttcttgg gtatagtgcc aggcgctgaa gttaattggg cgctgcggaa ctaccagcag
    21181 accgttgccg tggcggttag tcagtgccgt ccagcggaca tgctgacggt tgccgttgtt
    21241 ctgtgggaag ggatagttct cgaacatggc atcgacggtg ctgcgccaga tatcgatgat
    21301 gttagcttgc tggctgtcgg cgtagttttc gcccggtcca cgaccgtaat acgccacctg
    21361 atcgtattcg ccgttaattc ccatggtgaa accgatgcac ggaatgatgt gcggatagtc
    21421 gccgtaacgc tcgccggaaa gcgccacgtt aacctggcca tctgcagcga tgcgccagat
    21481 gtaggtacag cgcatcccga agtcaaacac cggcggggca ataactgtgc ggctgatgat
    21541 caacacttca ccatcgctct gttctacggc aaagtcgcgc agatgttcct gcatgatctg
    21601 caaatgattc ggttgccaca gcccttcgta ctcctgcttg tggttgtcaa tcattggttt
    21661 gaagaagttg atctttggct cgcgggtcag cagcgactcg ccattcacct gccaggatgt
    21721 tggtttgcca ctcatttttg agaaggtgat cgcgaagttg tagccgcgaa cggtgcagct
    21781 caaacgatcg tcttccagcg tcagcggacg cgcattattt ggtgcgaaag gcactggctg
    21841 cgcggtgttt tccttcagcg ggaactgata agtggctata gggtgtccgg cttcgctgta
    21901 gcgggtgcgg gaatctttgg tcaccataat gttgaggaac gcttcgcggg cgtccagttg
    21961 cggcagcgtg atctgcaagg gggcttcgct gttcggcgca acgtcgcgca gtttaatctg
    22021 ctgcgtcgcg agcgtttcac cttcggcgcg cacctctgcg tacagggtgt agtcatcaag
    22081 cgtggtaaac cacagtttat tttcgacttt cagctcgccg cgagtcagat ccagcgcgtg
    22141 gatttttacc ggcgcgataa cctgtttgta ctctttcagg cccggtcccg gcgtctgatc
    22201 ggaatagatc aaaccatcaa gacagaagtt atagttgttg ggatagtcgc cgtagtcgcc
    22261 gccgaattta taccagacat tgccgttgtc atcctgcgcc tggatcccgt ggtcgcacca
    22321 ctcccagaca taatgtccct gaatacaatc gtgcttatag aagacgttct ggtactccgt
    22381 cagcccgccc ggtccgttcc ccatcgcatg agtatattca cagatgatgc gcggcttcgg
    22441 atgcgggtat tcaccaaact cattcatcag cggcacgcgg gtgtacatgg tggaaataat
    22501 atcgaccact tcagcatcgc gatcttcttc gtaatgcacc agtcgcgtgt catccagcgc
    22561 tttcgctgcg tggtatatcg cgcggatgtt acagccatag ccggattcat tgcccagcga
    22621 ccagatgatg atcgacggat ggtttttctg cgcgtggata tggcgaacaa tgcgctcgac
    22681 gtagactttt tcccactgcg gatcgtcggt aatacggctg atatcgccga cattagcaaa
    22741 gccgtgcgat tcgacgtcgg tttccgccat cacaaacaag ccgtagatat cacacagttc
    22801 gtaaaaacgc ggatcgttcg ggtagtgagc ggtacgcacg gagttgatgt tgtgctgctt
    22861 catcaactgg agatctttct cgacgcgatc cattccaacg gcgcggcctt tgcgatgatc
    22921 gttgtcgtga cggttgacgc cgtgcagcat cacataacgg ttattgatcc agaacagacc
    22981 gtcgcgcact ttgatatcac ggaagccaac gcgttgtggc accacttcca gaacgttgcc
    23041 gtcggcgtct ttcagcgtca tgaccagatg gtaaagataa ggggattctg ctgaccattg
    23101 ctggggctgt tcgacagtaa aagcaaagct ggcgctggtc agtttttcaa ttgccaaatg
    23161 atcaatggtg ctgctgtgca ccacgcgttc gccatcaaac agggtatatt ccagcgtcgt
    23221 gacgacaggg gaggctgcga gattttccag caccacttcg caggaaagcg tggcatcgca
    23281 ataggcttcg tcaaagtcgg tacgcacggt gaaatcgtta atatgcgtta ggtgttttcc
    23341 gaccagataa acatcgcgga agatccccgc tgaccaccac atatcctggt cttccacgta
    23401 ggtagagtcc gcccactgca tcacgcgcac acacaacagg ttgtcgccgg ttttaaccat
    23461 tgcgctgatg tcaaactctg cggtcaggcg actgcccttg ctgaaaccca catactgacc
    23521 gttaacatag acttcaaaat aagtttcaac gccgtcaaat ttaatcagcg tctgtttacc
    23581 ctgccagccg tcgctgaggg tgaaaatacg ttgataggca ccggttgggt tatcgctggg
    23641 gacaaacggc acatcgatgg ggaacggaaa accttcgtcg gtatattgca gtttgccgtg
    23701 accttccatt tgccacatgg cggggacggt aatatgcccc cagtcagcca ttaactcaga
    23761 ggtgaaggct tcaggcactt gcagcgggtg gtcaaaaaat ggaaattcca ctgaccgctt
    23821 aagggcagaa acaggctgct ggtttcgcgg gcaaaggtac gcgcttgcgc aacagaatca
    23881 tatgaaaaaa agtacgcacg cggcgcaagt cggttttcgt gggtgagctg aatgttttcc
    23941 cagcgattca tagggcctcc cggtagagag aaatcggaac cattcatggt gatggtagtt
    24001 tgtgtaattg ctggggagtt tagtaaaatt tttactaaaa agtagcgggt aaatgcattt
    24061 actttaactg gatcacgaaa ataaacggca gcactgtccg gcaaaaacga ttgccggaca
    24121 gcgtgcaagg ggatttaacg ggtcgtgccg cgcagtttta atttgctggg aacgaagacc
    24181 aacagcggca gcgcgcgacc atcgcgggct ttttcataca ccaggttaac gccctgactt
    24241 cccatcatct cggaatggat gcgcacggtg gagagcggcg gaaaggtaaa tcgcgcggtg
    24301 gggatatcgt taacgctgat aagcgaaata tcctgtggga tgttcaggcc acgttcatga
    24361 attgcccgca gtacgccgat agcaatggaa tcggaagcaa caaacagtgc cttcggatag
    24421 tcttcctgcg ccagcatctg ttttgccagt tcatagcccg acgaactgga aaaaccgccg
    24481 cgccagatat cctcttcgcg taccacttgt ttcagtcggc catattccgc aaaggcgacc
    24541 tcacgaatat ccgccttgcc aggctcatct tcaccgccaa taaaaccaat acgattaacg
    24601 ccctggttga tatagaagtc gatgatttct ttactgatgc gtgccagatc gatatccacc
    24661 gcatcgtaac cgctgctggg ttcgtgaaag tcgataaaac agatattgtc ggtcaacgcg
    24721 ctggcagcgg cgcgcagggc gggcgtgggt ttgccgacaa ttaaaatacc ggtgacgttt
    24781 ttaatgtctg gtaatccgct gtgttcataa cagttggtga gctcaatgcc cagcttttcg
    24841 cactgagttt caatgccgtg gcggatcgcc agatagtaag gatcgttgat ctccagctcc
    24901 tgctggtagc tgtagatagc cagaatatgg tgttggttaa ctgcacctgt ctgtagttta
    24961 cgggcgctac tggtcttgta ctccagcttt tcggcgatct cgagaatgcg atgtttcgtc
    25021 tcttctttta cattcaatgt cggatcgtca tttaagaccc tggatactgt cgccagggat
    25081 acgccagctt cgattgcgat gtcttttaat gttgccatgt ttaccttttt tactttccct
    25141 gatgtgcgcc cccattgtag aggaagtgct tatcgggtca cctgttttca gtaaataaag
    25201 cgcgtttctt tgacgctgta acggtaacac agcggcttag gaatgtgatc acgcctgcat
    25261 tctccatttt tagcctacag gattgagaaa aacttttgct atagtttagt aaaattttac
    25321 ccgaagggag gaagcaatgg aaaccgtggc ttacgctgat tttgcacgtc tggaaatgcg
    25381 cgtcggaaag attgtggaag tgaaacgcca tgaaaacgcc gacaagctgt acatcgtaca
    25441 ggttgatgtg gggaaaaaac actgcaaacc gtgaccagcc tggtgccgta ctacagcgaa
    25501 gaggagctga tggggaaaac ggtggtggtc ttatgcaatc tgcaaaaagc gaaaatgcgt
    25561 ggtgaaacgt cggaatgcat gctgttgtgt gcggaaaccg atgacggcag tgaaagcgtg
    25621 ttgttaacgc cggagcggat gatgcctgcg ggcgtacgcg tcgtataaaa agatcggatg
    25681 gcgacgtcgt atcgccatcc gatttgatat tacgcttctt cgacacttac tcgcatggcc
    25741 gccagcgcct tacgcgccgc tttgatcacc agttcacact gttcaatggt cagtgtcagt
    25801 ggcggttcaa tgcggatcgt tttggcgtta ttgagcgttc cggccaccag tacgcgctgg
    25861 cggaacatct cgctggcaaa gttatagccg atttcgttat caacaaactc aatcgccatc
    25921 aacatccctt taccacgcgc ttcctgtacc agatcgggat attcccgcgc cagttgacgg
    25981 aaaccgtcca gcaacatatc gcctttttgc tcagcctgag ccggtaagtt ctgctccagc
    26041 aacacattga tggtcgccag cgccgccgca caggccagcg ggttgccgcc aaaggtggtg
    26101 gtatgcagga acgggttgtc gaacagaact gagaacacct cttcagtggc gatggtcgcg
    26161 ccaatcggca tcacgccgcc gccgagggct tttgccagac acagaatgtc cggctgaacg
    26221 ttctcatgct cgcaggcgaa catcttgccc gtgcgcccca tgcccgtttg tacttcatcg
    26281 aggatcatca gtgcgccgaa ctcatcgcac agcttacgca cggcggtgag atagcccggc
    26341 ggcggcagaa ttacaccacc ttcgccctga atcggttcga ggatcaccgc agccacatca
    26401 tcaccggttt ttttacactc gctaagggcc gtgcgcatgg cttcgatatt gccaaacggc
    26461 acatgacaga accctggcag cagtggcata aacggtttgc ggaaggtcga tttcgccgtg
    26521 gctgacagcg cgccaagtga tttaccgtgg aacgcgccac tggtggcaat aaaagtaaac
    26581 ttgccgcgcg gcgactgata agccttcgcc agcttcagcg ctgcttcaac ggactcggtg
    26641 ccgctattac agaagaagct gtatttcagt ttaccgggcg ttagcgcagc aagggttttc
    26701 gccagcatcg ctcgtaacgg atcgagcagc tcctggctat gtaacggttg tttcgcaagt
    26761 tggttctgta cggcggaaac cacaactgga ttacggtgcc ccacgttgaa aattccaaaa
    26821 cctcccaggc agtcgataaa ctcctgtccc tgggtgtcga caagcgtatt taaacctccc
    26881 gcttgccatt ctacggctcc gtaatccccg ccggcggtaa cagatttgcg atactctaaa
    26941 aaccccggat tgacatgctc tttgaagtat tcaatcacct cccggttaag tgctttcatc
    27001 tcctcatgat ccagcgttcg cttttcaatg agattcaggg cgtgggcgct gcacgctaaa
    27061 gccgatgcgc tcgaaggtaa cctgttcaaa atatgctccg gaggctcgcg tatcacatga
    27121 taccgattta agtattgcag ggattgcgcc actccggctg cgatcgcgaa aatcgggata
    27181 aacacaaatg cggttatcat ttatgcaata tttaatgcta tctgttaaca tttgttgtta
    27241 ttttgcacgg tttttgtcgg gtatggattt gatgattgct gcgcaaatgc acgctttcag
    27301 ggcaataatt gcctgatttt tgggcaaggt aattaacgtt ttcgtatagt aacagagtga
    27361 aagtatttta aatcaaagaa ttagatttgt gctttaatcg caaattgcga tctaaatcaa
    27421 attaatcggt taaagataac cgcagcgggg ccgacataaa ctctgacaag aagttaacaa
    27481 ccatataacc tgcacaggac gcgaacatgt cttctcattc gtatgtcacc cagcaaaata
    27541 ccccgctggc ggacgatacc actctgatgt ccactaccga tctgcaaagc tatatcactc
    27601 atgctaatga cacttttgtg caggtgagcg gctttacctt gcaagagtta caagggcagc
    27661 cgcacaacat ggtgcgtcac ccggatatgc caaaagcggc gtttgcggat atgtggttca
    27721 ccctgaaaaa aggggagccc tggagcggca tcgtgaaaaa tcgccgcaaa aatggcgacc
    27781 attattgggt gcgggccaat gcggtaccga tggtgcgcga gggaaaaatc agtggctata
    27841 tgtcgattcg tacccgggcg acggatgaag agatcgcggc ggtggagccg ctgtacaaag
    27901 cgttgaactc cggacgtacc agtaagcgta ttcataaagg cctggtggtg cgtaaaggct
    27961 ggctgggtaa actgccttca ttaccgcttc gctggcgggc gcgtggagtg atgaccctga
    28021 tgtttatctt gctggcggcc atgctttggt ttgttgctga cccggtggtg acgtatttcc
    28081 tctgtgtgtt agtggtattg ttggcaagcg cttgttttga atggcagatt gtgcgcccga
    28141 tagaaaatgt cgcccgtcag gcactgaagg tggcgaccgg agagcgtaat agtgttgagc
    28201 acctgaatcg cagcaatgag ctggggctga cattacgcgc ggtagggcag cttggcctga
    28261 tgtgccgttg gctaattaac gatgtctcaa gccaggtgtc cagtgtcaga aatggcagtg
    28321 agacgctggc gaaaggcacc gatgaactga acgaacatac ccagcagaca gttgataacg
    28381 ttcagcaaac ggtggcgacc atgaaccaaa tggcggcgtc ggtgaaacag aactctgcca
    28441 cggcgtcggc tgccgataaa ctttctatca ccgccagtaa tgcggcagtg cagggcgggg
    28501 aggcgatgac tacggtgatc aagacaatgg acgatattgc cgacagtacc cagcgcattg
    28561 gcaccattac ttcgctgatt aacgatattg cgtttcagac caatattctg gccctgaatg
    28621 cggcggtgga agcggcgcgt gccggcgaac agggcaaagg ttttgcagtg gtggcggggg
    28681 aagtgcgtca tttagccagc cgcagcgcca atgctgccaa cgatattcgc aagctgattg
    28741 atgccagtgc tgataaggtg caatctggtt cgcagcaggt acacgccgcc ggacggacga
    28801 tggaagatat tgtggcacag gtgaaaaacg tcacccagtt gatcgcccag attagccatt
    28861 caacgctgga acaggctgat ggtctttcca gcctgacccg tgcagtggat gagcttaacc
    28921 tcatcaccca gaaaaatgcc gagctggtgg aagagagtgc gcaggtgtcg gcgatggtga
    28981 aacaccgcgc cagccgactg gaagacgcgg tgacggtgct gcattaatcg gtatgccgga
    29041 tccggcggtt ggagcacaat gcctgatgcg atgctggcgc atcttatcag gcctacgggg
    29101 ggtagggtac gccgcatccg gcaatcggtg attaatccag ttgggtaata tcaaaagcgg
    29161 cgcggtcgat caccgcaatg atctttttta tttgtgcatc agtgatatcg ctctggttga
    29221 cgcgtaaatc cagcaccgct ttaaaattat ccagcgcccg cttcatttgc gggttctggc
    29281 gcagcgccgc gccaacgcaa cgcgctttga tgcgttcttc aatcatctcc acctgttcgc
    29341 ggttttcttc cagccactgc gcgccttgtt cggtcagcgc aatctgcttc ttaccacctt
    29401 cctcttcgcg gatggtaatc agcgactgtt cctgcagaaa atccagcgtt gggtagatga
    29461 cgcccgggct tggggtgtaa ttcccctggg ttagattctc aatcgcttta atcaattcgt
    29521 aaccgtggct gtcatcgcgc gagagaatat ccagaatcac cagacgcaat tcaccgtgac
    29581 caaagaaacg ttgccgacga ccgccgccgc gaccgtggcg accaccgcag cattgaccgt
    29641 gttcatgctg gtgactgtgt ccacagtgct cgtgttctga cttctcacct ttgcagcagc
    29701 cctcatggcg tggctggcct tcatgtttac aacacccttc gtgatgatgg ctcatatcag
    29761 cctccttttg cttaattaga tatatctaat ctatatctga tatgagcact cttgcaagaa
    29821 taaaaatgat ttttaaatgt ggactcatct cacacgtagg ccggataagg cgttcacgcc
    29881 gcatccggcg ttgagtaatg atgcctgaga agaggcggtt cgtcttatca gactatagac
    29941 atatcagttc tacaaatcgc ttgcatttat caagattaac aatcattatc atttgcgaaa
    30001 attatttaga tatatctgat taccatcacg aaggcgataa caatgaataa ctccccccgc
    30061 tacccgcagc gcgttcgcaa tgatctgcgc ttccgtgaac tgactgtgtt acgcgttgag
    30121 cgcatcagtg ccggttttca gcgcattgtc ctcggcggcg aggcgctgga cggttttaca
    30181 tcgcgtggct ttgacgatca cagcaaactc ttctttcctc aacctgacgc tcactttgtg
    30241 ccgccaacgg taacggaaga gggcatcgtc tggccggaag gaccacgccc accgtcgcgt
    30301 gactatacgc cgctgtatga cgaactacgc catgaactgg cgatcgattt ctttattcac
    30361 gacggtgggg tcgccagcgg ctgggcgatg caggcgcaac cgggcgataa acttacggtg
    30421 gcaggtccgc gcggttcgct ggtggtgccg gaagattacg cgtatcagct gtatgtctgc
    30481 gatgaatccg gaatgcccgc attgcgccgc cgcctggaaa cgttgagcaa acttgccgtt
    30541 aaaccgcaag ttagtgcgct ggttagcgtg cgggataacg cctgtcagga ttatctcgcg
    30601 caccttgatg gttttaatat cgaatggctg gcacatgatg agcaggtggt agatgcgcgt
    30661 ctggcgcaga tgcaaatccc tgccgatgat tacttcatct ggataaccgg cgaaggtaaa
    30721 gtcgttaaga atttaagccg ccgctttgaa gcggaacagt atgacccaca gcgggtacgt
    30781 gcagcggctt actggcacgc aaagtaactg atatataaaa agaaaaaggc tgacgatttc
    30841 tcgtcagcct ttgctatatc tggtggcccc tgctggactt gaaccagcga ccaagcgatt
    30901 atgagtcgcc tgctctaacc actgagctaa ggggccatgg tagcggatta taaagtaact
    30961 ccgtgtcgca atccagccat taccgcgcgc ctgctgtttt tataaacaat gtattttcaa
    31021 tccgttatac ttttcctggt gatgttagaa aggagtaaat atggttgagg atattttggc
    31081 tccagggtta cggatcgtgt tttgcggtat caaccctggg ctttcatccg ccgggactgg
    31141 ttttcccttt gctcatccgg caaatcgctt ctggaaggtg atatatcagg ccgggtttac
    31201 cgaccgtcag ttgaagccgc aggaggcaca gcatctgctg gattatcgtt gtggcgtcac
    31261 caaactggta gaccgtccaa cggtgcaagc caatgaagtt tcaaagcaag aactacatgc
    31321 aggcgggcgt aagctgattg aaaaaattga agattatcag ccgcaggcgt tggcgattct
    31381 gggcaaacaa gcatatgaac agggattcag ccagcgcggt gcacagtggg ggaaacaaac
    31441 gctcaccatt ggttcgacgc agatttgggt gctgccaaat cccagcggtt taagtcgcgt
    31501 ttcactagag aaactggttg aagcgtatcg cgagctggac caggcgctgg tagtgcgtgg
    31561 gcgataaaaa acgccaccga aa
//
LOCUS       DAJVTL010000040        31515 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.040, whole genome shotgun sequence.
ACCESSION   DAJVTL010000040 DAJVTL010000000
VERSION     DAJVTL010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 31515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31515
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.040"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1220
                     /gene="puuE"
                     /locus_tag="OQQ26_001741"
     CDS             <1..1220
                     /gene="puuE"
                     /locus_tag="OQQ26_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-aminobutyrate transaminase"
                     /protein_id="HCS1857217.1"
                     /translation="GVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPE
                     LVAAVELQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAV
                     KIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHG
                     ISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIV
                     MIADEVQSGFARTGKLFAVDHYVDRPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGG
                     LGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGL
                     GSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQF
                     DAAMKILQDALSD"
     gene            complement(1338..2315)
                     /gene="pspF"
                     /locus_tag="OQQ26_001742"
     CDS             complement(1338..2315)
                     /gene="pspF"
                     /locus_tag="OQQ26_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HCS1857218.1"
                     /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL
                     IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNAVLPAMVNEGT
                     FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLL
                     NYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP
                     LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
     gene            2482..3150
                     /gene="pspA"
                     /locus_tag="OQQ26_001743"
     CDS             2482..3150
                     /gene="pspA"
                     /locus_tag="OQQ26_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HCS1857219.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
                     SLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
                     QDNQ"
     gene            3204..3428
                     /gene="pspB"
                     /locus_tag="OQQ26_001744"
     CDS             3204..3428
                     /gene="pspB"
                     /locus_tag="OQQ26_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HCS1857220.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRDELSQSEQQRLA
                     QLADEAKRMRERIQALESILDAEHPNWRDR"
     gene            3428..3787
                     /gene="pspC"
                     /locus_tag="OQQ26_001745"
     CDS             3428..3787
                     /gene="pspC"
                     /locus_tag="OQQ26_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HCS1857221.1"
                     /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
                     IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            3796..4017
                     /gene="pspD"
                     /locus_tag="OQQ26_001746"
     CDS             3796..4017
                     /gene="pspD"
                     /locus_tag="OQQ26_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HCS1857222.1"
                     /translation="MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
                     RRPLKMLLAVALEPLLSRAANKLAQRYKR"
     gene            4092..4406
                     /gene="pspE"
                     /locus_tag="OQQ26_001747"
     CDS             4092..4406
                     /gene="pspE"
                     /locus_tag="OQQ26_001747"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HCS1857223.1"
                     /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP
                     LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV
                     KG"
     gene            4618..6141
                     /gene="ycjM"
                     /locus_tag="OQQ26_001748"
                     /pseudo
     CDS             4618..6141
                     /gene="ycjM"
                     /locus_tag="OQQ26_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415825.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucosylglycerate phosphorylase"
     gene            6136..7086
                     /locus_tag="OQQ26_001749"
                     /pseudo
     CDS             6136..7086
                     /locus_tag="OQQ26_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415826.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
     gene            7107..7988
                     /locus_tag="OQQ26_001750"
     CDS             7107..7988
                     /locus_tag="OQQ26_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HCS1857224.1"
                     /translation="MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRL
                     PLNPNIESTFVGVSNYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREF
                     RLRKTARSLVILSYVTPSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPG
                     SSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMP
                     VLATVVTLRTIWMFYMFADVYLLTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIII
                     FAVILLTRKRVNLNGNK"
     gene            7975..8817
                     /locus_tag="OQQ26_001751"
     CDS             7975..8817
                     /locus_tag="OQQ26_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HCS1857225.1"
                     /translation="MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKSAKEAIS
                     LHPTLLPQQWTLEHYVDIFNPVIFPFVDYFRNSMVVSVVSSVVAVFLGILGAYALSRL
                     RFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITIVTQTLPTAVFM
                     LKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFAS
                     IFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAG
                     GVKG"
     gene            8848..9900
                     /locus_tag="OQQ26_001752"
     CDS             8848..9900
                     /locus_tag="OQQ26_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HCS1857226.1"
                     /translation="MKKLVATAPLVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVD
                     FRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVG
                     DSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF
                     VVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGTDVGKEI
                     KTLTGKQGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNN
                     AKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLIDPVVTFAKSPESYMQ
                     YVDQHPEQSIKMGVTF"
     gene            9910..10698
                     /locus_tag="OQQ26_001753"
     CDS             9910..10698
                     /locus_tag="OQQ26_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415830.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HCS1857227.1"
                     /translation="MKIGTQNQAFFPENIREKFRYIKEMGFDGFEIDGKLLVNNFEEV
                     KAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAW
                     GMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLELLNRYQDHMINTLA
                     DARRYIVENDLKHVQIIGDFYHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGT
                     LDFHALFEQLRADNYQGYVVYEGRIRAEDPVQAYRDSLAWLRTC"
     gene            10708..11763
                     /locus_tag="OQQ26_001754"
     CDS             10708..11763
                     /locus_tag="OQQ26_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HCS1857228.1"
                     /translation="MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSR
                     LSQAQALAEKYGNASVWDDPQAMLLAVKPYVVSVCSPNRFHYEHTLMALEAGCHVMCE
                     KPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARA
                     LRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQK
                     SCGQFGEWDPATYSAEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGA
                     TLFPAHIYTDNNGELMTLMQRELADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQ
                     LVAALYQSAETGTRVEL"
     gene            11760..14027
                     /gene="ycjT"
                     /locus_tag="OQQ26_001755"
     CDS             11760..14027
                     /gene="ycjT"
                     /locus_tag="OQQ26_001755"
                     /EC_number="2.4.1.230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kojibiose phosphorylase"
                     /protein_id="HCS1857229.1"
                     /translation="MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQ
                     TRGMYLAGLYHRAGKGEINELVNLPDVVGMEIAINGEVFSLSREAWQRELDFASGELR
                     RSVVWRTSNGTGYTIASRRFVSADQLPLIVLEITITPLDADASVLISTGIDATQTNHG
                     RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTS
                     AQLHAGETVTLQKLVWIDWRDDRQAVLDEWGSASLRQLEMCAQQSYDQLLAVSTENWR
                     QWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWD
                     TEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETP
                     EFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAK
                     FWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAFTSYMAYYNVQQALSIARQFGCSDDA
                     FIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSRAEV
                     NEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGL
                     LTQSYQFWLEGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPA
                     LPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLISVAEESVFCLGDF
                     ILPSNGTATTHQEDE"
     gene            14024..14683
                     /gene="pgmB"
                     /locus_tag="OQQ26_001756"
     CDS             14024..14683
                     /gene="pgmB"
                     /locus_tag="OQQ26_001756"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HCS1857230.1"
                     /translation="MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESL
                     KGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLL
                     ADLRAQQISVGLASVSLNAPTILDALELREFFTFCADASQLKNSKPDPEIFLAAGAGL
                     GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGITGAQLLLPSTDSLTWSRLSAFWQN
                     V"
     gene            14697..15779
                     /locus_tag="OQQ26_001757"
     CDS             14697..15779
                     /locus_tag="OQQ26_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1857231.1"
                     /translation="MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKS
                     TTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLK
                     MQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDE
                     PLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGA
                     PKTVYNQPANMFVAGFIGSPAMNFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQGSLH
                     KPIVMGIRPEDIHPDAQEENNISAKISVAELTGAEFMLYTTVGGHELVVRAGALNDYH
                     AGENITIHFDMTKCHFFDAETEIALR"
     gene            15824..16729
                     /gene="ompG"
                     /locus_tag="OQQ26_001758"
     CDS             15824..16729
                     /gene="ompG"
                     /locus_tag="OQQ26_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monomeric porin OmpG"
                     /protein_id="HCS1857232.1"
                     /translation="MKKLLPCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYG
                     EDMDGLAEPSVYFNAANGPWRISLAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLESD
                     DFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN
                     DLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYL
                     PLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYA
                     FEWQDHDEGDSDKFHYAGVGVNYSF"
     gene            complement(16840..17838)
                     /locus_tag="OQQ26_001759"
     CDS             complement(16840..17838)
                     /locus_tag="OQQ26_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCS1857233.1"
                     /translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL
                     QYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHVITAKAEEEGFDVILQT
                     SHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHV
                     YSVDTDNFGDSIALTDALIENGHKNIACLHAPLDVHVSVDRVNGYKQSLSAHNIAVRD
                     EWIVDGGYTHETALQAARELLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAV
                     VGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK"
     gene            17993..19390
                     /locus_tag="OQQ26_001760"
     CDS             17993..19390
                     /locus_tag="OQQ26_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HCS1857234.1"
                     /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
                     SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
                     NGQRGEWSVKWRMMCEGLDPLAPADENRLADIAAAWTEYLHHCKQQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDAWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
     gene            19387..20448
                     /locus_tag="OQQ26_001761"
     CDS             19387..20448
                     /locus_tag="OQQ26_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HCS1857235.1"
                     /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDE
                     APEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL
                     GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
                     QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMI
                     AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
                     EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR
                     QLIGQVKETLQKGKTPSEK"
     gene            20596..22137
                     /gene="tyrR"
                     /locus_tag="OQQ26_001762"
     CDS             20596..22137
                     /gene="tyrR"
                     /locus_tag="OQQ26_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HCS1857236.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
                     ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
                     DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
                     ITPVYLQGENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
                     QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
                     VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKNEE"
     gene            complement(22181..22687)
                     /gene="tpx"
                     /locus_tag="OQQ26_001763"
     CDS             complement(22181..22687)
                     /gene="tpx"
                     /locus_tag="OQQ26_001763"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HCS1857237.1"
                     /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
                     VITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
                     AALAVLKA"
     gene            22806..23773
                     /gene="ycjG"
                     /locus_tag="OQQ26_001764"
                     /pseudo
     CDS             22806..23773
                     /gene="ycjG"
                     /locus_tag="OQQ26_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415841.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
     gene            complement(23748..24475)
                     /gene="mpaA"
                     /locus_tag="OQQ26_001765"
                     /pseudo
     CDS             complement(23748..24475)
                     /gene="mpaA"
                     /locus_tag="OQQ26_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415842.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
     gene            complement(24784..25422)
                     /locus_tag="OQQ26_001766"
     CDS             complement(24784..25422)
                     /locus_tag="OQQ26_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707232.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1857238.1"
                     /translation="MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP
                     TNSKIIMGDVLNHAALKQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVL
                     SLGIYDEVPGKFGEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYE
                     LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPVTDGDKPLFM"
     gene            complement(25440..26372)
                     /locus_tag="OQQ26_001767"
     CDS             complement(25440..26372)
                     /locus_tag="OQQ26_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000680621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1857239.1"
                     /translation="MKHIQIRNSDMAWHIAANIQFPPNFDESKQYPAIISVHPFGSCK
                     EQTSGNIYGKALAEKGYLVLAYDASFQGKSGGEPRWIEDPTQRVEDISRVIDYAVTLP
                     YVDAERIGVLGVCGGGGYAINAALTEKRIKAVVSITGVNIGRLFREGFSNYDPIGVLN
                     AMASQRTKEARGGELQINELLPSSLDAAKAHGLTERDVYEATDYYKTPRGQQPGGATK
                     MLFSHAQKTLAWDAFAFTEVLLTQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQL
                     VSLPDFSHYELYDKPEAVQEALAKVIPFFNTHLG"
     gene            complement(26372..27292)
                     /locus_tag="OQQ26_001768"
     CDS             complement(26372..27292)
                     /locus_tag="OQQ26_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HCS1857240.1"
                     /translation="MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYPAIVVSHPGG
                     GVKEQTAGTYAEKLAEKEFVTIAYDASYQGESGGEPRQLENPYIRTEDVSAVIDYLTT
                     LSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSID
                     ALPHIEAGSNARTSDISSEEYAIMPLAPMKEADAPNEELRQAWEYYHTPRAQYPTAPG
                     YATLRSLNQIITYDAYHMAEVYLTQPMQIVAGSQAGSKWMSDDLYDRASSQNKRYHIV
                     EGANHMDLYDGKAYVAEAISVLAPFFEETL"
     gene            27430..28329
                     /gene="pgrR"
                     /locus_tag="OQQ26_001769"
     CDS             27430..28329
                     /gene="pgrR"
                     /locus_tag="OQQ26_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator PgrR"
                     /protein_id="HCS1857241.1"
                     /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE
                     RLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSALASLSDLQNRPSGTIRITTVE
                     HAAKTILLPAMRTFLKSHPEIDIQLIIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI
                     GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAVNLYLPTSGTANRWRLIRGGREVRVR
                     MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY
                     PHRRHAGSAFSLFIDRVKYKGAV"
     gene            28666..30279
                     /gene="mppA"
                     /locus_tag="OQQ26_001770"
     CDS             28666..30279
                     /gene="mppA"
                     /locus_tag="OQQ26_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415845.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide ABC transporter
                     substrate-binding protein MppA"
                     /protein_id="HCS1857242.1"
                     /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA
                     KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA
                     VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQIYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA
                     WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ
                     KIAITVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL
                     TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNG
                     RLIKPWLKGYPINNPEDVAYSRTMYIVKH"
     gene            complement(30330..31361)
                     /gene="ynaI"
                     /locus_tag="OQQ26_001771"
     CDS             complement(30330..31361)
                     /gene="ynaI"
                     /locus_tag="OQQ26_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low conductance mechanosensitive channel YnaI"
                     /protein_id="HCS1857243.1"
                     /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
                     VQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE
                     KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
                     KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN
                     SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV
                     YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD
                     NITPPEQGR"
BASE COUNT         7775 a         7580 c         8339 g         7821 t
ORIGIN      
        1 gcggggttgg cgtgatgtgt aacttcttcg cccagtcggc tgaaaacgcc acgctgaagg
       61 atgttgaagg caacgagtac atcgattttg ccgcaggcat tgcggtgctg aataccgggc
      121 atcgccaccc tgaactggtc gcggcggtgg agctgcaact gcaacagttt acccacaccg
      181 cgtaccagat tgtgccgtat gaaagctatg tcaccctggc ggagaaaatc aatgcccttg
      241 cgccggtgag cgggcaggcc aaaaccgcgt tcttcactac cggtgcggaa gcggtggaaa
      301 acgcggtgaa aattgctcgc gcccataccg gacgccctgg cgtgattgcg tttagcggcg
      361 gcttccacgg tcgtacgtat atgactatgg cgttaactgg aaaggtcgcg ccgtacaaaa
      421 tcggcttcgg cccgttccct ggttcggtgt atcatgtacc ttatccgtca gatttacacg
      481 gcatttcaac acaggactcc ctcgacgcca tcgaacgctt gtttaaatca gacatcgaag
      541 cgaagcaggt cgcggccatt attttcgaac cggtgcaggg cgagggcggt ttcaacgttg
      601 cgccaaaaga gctggttgcc gccattcgcc gcctgtgcga cgagcacggc attgtgatga
      661 ttgccgatga agtgcaaagc ggctttgcgc gtaccggaaa actttttgcg gtggatcatt
      721 acgtcgatag gccggattta atgacgatgg cgaaaagcct cgcgggcggg atgccgcttt
      781 cgggcgtggt cggtaacgcg aatattatgg acgcgcccgc gccgggcggg ttgggtggca
      841 cctacgccgg gaacccgctg gcggtggctg ccgcgcacgc ggtgctcaac attatcgaca
      901 aagaatcact ctgcgaacgc gcgaatcaac tgggccagcg tctcaaaaac acgttgattg
      961 atgccaaaga aagcgttccg gccattgctg cggtacgcgg tctggggtct atgattgcgg
     1021 cagagtttaa cgatccgcaa acgggcgagc cgtcagcggc gattgcacag aaaatccagc
     1081 aacgcgcgtt ggcgcagggg ctgctcctgc tgacctgtgg cgcatacggc aacgtgattc
     1141 gcttcctgta tccgctgacc atcccggatg cgcaattcga tgcggcaatg aaaattttgc
     1201 aggatgcgct gagcgattaa tagcccaacg caataatgtc tgatgcgctg cgcttatcag
     1261 gcctgcaaac gacgttgatt atgtatgccg gataaagcat tcacgccgca tccggcaagt
     1321 tgtattgccc aacttcgcta aatctggtgc tttttcaaca acgcgcggaa ctgatgatag
     1381 gttaacccca gtaattcagc cgcgcgcttc tggttatatt tcccttgttg caaactgagt
     1441 tgcagcaact ctttttcctg ctgcatctga aactcacgta aatccagcgg cagtgttgga
     1501 agcgaggtgg tttctgaaac ggcgatagcg tcttcaggcg gacgccgttt aaagggatca
     1561 ataatgatgt catcaagcgg ataatcgctg gtgccgtggc gatacactga acgttccacc
     1621 acgtttttca attcacgaat atttcccggc caacgataat tcagcaatgt ttctctggcg
     1681 cgctccgtaa accccgggaa cagaggcagc ttgatttccc gacacatctg gatggcaaag
     1741 tgttctgcca tcaacataat gtcgctttcg cgctcgcgca gtggtggcag ttgtacaaca
     1801 tcaaaagcca gtcggtcgag caggtcagcg cgaaaagtgc cttcattgac catcgccgga
     1861 agaacggcat tcgtcgcgca taccaaccgc acattcacct gcaatggctg gctgccgcca
     1921 acgcgctcca gttcaccgta ctcaatcacg cgcaataatt tctcctgcac catcatcggt
     1981 gccgtagcga gttcatcaag aaatagcgta ccgccgtcgg cacgttcaaa tctccccgga
     2041 tgacgttttt gcgcaccggt aaacgctccc gcttcgtgac caaacagttc ggaatccagc
     2101 agattttcat ttaacgccgc gcagttaagg gaaataaacg gcccttgcca acgggaggag
     2161 agataatgca ggcggctggc aatcagctct ttaccggtgc cgcgttcgcc gatgatgagc
     2221 accggtttgt ccagcggtgc gagatgcgaa acctgttcca gcacttcgag aaagctgttc
     2281 gcctcaccaa gtaaattatc tttgtattct gccatgatga aattcgccac ttgttagtgt
     2341 aattcgctaa ctcatcttgg catgttgctg ttgattcttc aatcagatct ttataaatca
     2401 aaaagataaa aaattggcac gcaaattgta ttaacagttc agcaggacaa tcctgaacgc
     2461 agaaatcaag aggacaacat tatgggtatt ttttctcgct ttgccgacat cgtgaatgcc
     2521 aacatcaacg ctctgttaga gaaagcggaa gatccacaga aactggtgcg tctgatgatc
     2581 caggagatgg aagatacact ggttgaagta cgttctactt cggcgcgcgc gttggcagaa
     2641 aagaaacagc tgactcgccg tattgaacaa gcgtcggcgc gtgaagttga atggcaggaa
     2701 aaagccgaac tggcgctgct gaaagagaga gaagatctgg cgcgtgcggc gttaattgaa
     2761 aaacagaaac tgaccgatct gattaagagc ctggaacatg aagtgacgct ggtggacgat
     2821 acgctggcac gcatgaagaa agagattggc gagctggaaa acaaattgag cgaaacacgc
     2881 gctcgccagc aggcattgat gttacgccat caggccgcaa actcgtcgcg cgatgtgcgt
     2941 cgtcagctgg acagtggcaa actggatgaa gcaatggctc gtttcgaatc tttcgaacgt
     3001 cgtattgacc agatggaagc ggaagcagaa agccacagct tcggtaaaca aaaatcgctg
     3061 gacgatcagt ttgccgaact gaaagccgat gatgcaatca gcgaacaact ggcacaatta
     3121 aaagccaaaa tgaagcaaga caatcaataa taacatccag gcggcgtccg aacgcgccgc
     3181 cgctcatcgt ctaaggagta cttatgagcg cgctatttct ggctattccg ttaaccattt
     3241 ttgtgctgtt tgttttaccg atctggttat ggctgcatta cagcaatcgt tccggtcgcg
     3301 atgaattgtc gcaaagtgag cagcagcgat tagcgcaact ggctgatgaa gcaaaacgga
     3361 tgcgcgaacg tattcaggcg ctggaatcta ttcttgatgc agaacatccg aactggaggg
     3421 atcgctaatg gcgggcatta atctcaataa aaaattatgg cgtattccac agcagggcat
     3481 ggtccgcggc gtctgcgccg ggattgccaa ctattttgat gtaccggtaa aactggtgcg
     3541 tatcttggtg gtgctgtcga ttttcttcgg tctggcgctg tttaccctgg ttgcttacat
     3601 cattttgtca tttgcgcttg atccaatgcc ggacaacatg gcctttggtg agcagctacc
     3661 ttccagcagt gaattgctgg atgaagtcga ccgtgaactg gcggcaagtg aaacgcgttt
     3721 acgcgagatg gaacgttatg tcacttccga tactttcacg ttacgtagcc gtttccgtca
     3781 actgtgagga aagttatgaa tactcgctgg caacaggccg ggcaaaaggt gaagcctggt
     3841 ttcaaattag caggcaagct ggtacttctt accgcactgc gctatggccc ggcgggtgtg
     3901 gcgggctggg cgataaaatc agttgctcgc cgaccgctga aaatgttgct ggctgtggcg
     3961 ctggaaccgc tgttaagtcg ggctgctaat aaactggcac agcgttataa aaggtgaggg
     4021 gagtttcgca aaaattgtta aatctcaggc gtataatgga tggcaatttt catccataga
     4081 aggacgctta catgtttaaa aaaggcttac ttgctctggc actggtgttt tcactgcccg
     4141 ttttcgccgc tgaacactgg atcgatgttc gtgttccaga gcagtatcag caagagcacg
     4201 ttcagggggc catcaatatt cccctgaagg aagtgaaaga gcgcattgcc accgccgttc
     4261 cggataaaaa cgacaccgtg aaagtgtatt gcaatgccgg acgccagtca gggcaagcaa
     4321 aagagatcct tagcgagatg ggatataccc acgttgagaa cgccggtggc ctgaaagaca
     4381 tcgcaatgcc gaaggtcaaa ggttaaaaga attcaccatg agcggcgctt atgcgccgtt
     4441 ttttttctgt cacaccttat ttacatccct atagattatt tgcgtcagct cacaaatacg
     4501 ctttttccct ggtaaaaaat gatttcctgc gtgactaaaa cccttgtgct caattgacag
     4561 tttattttct gcggagtagt ctctcgtttc atgggatcgc taccacggaa aggcaacatg
     4621 aaacagaaaa ttactgatta cctggacgaa atctacggtg gaacatttac cgcaactcat
     4681 ttacagaaac ttgtaacgcg tcttgagagt gcgaaacgat taattacaca gcgacgtaaa
     4741 aaacactggg atgaaagtga tgtcgtgtta atcacctatg ccgatcaatt tcacagtaat
     4801 gatttaaaac cactacccac atttaatcag ttttaccatc aatggctgca aagcattttt
     4861 tcacatgttc atttattacc tttttatcca tggtcatctg atgatgggtt ttcggtaatt
     4921 gattatcatc aggtcgccag tgaagcgggg gagtggcagg atattcagca actcggtgaa
     4981 tgcagtcatt taatgtttga ttttgtctgc aaccatatgt cggcaaaaag tgaatggttt
     5041 aaaaactatt tacaacagca tccaggtttt gaagattttt ttattgctgt tgatccgcaa
     5101 accgatctca gcgccgtcac ccgtccgcgt gcgttaccgc tattaacacc gtttcaaatg
     5161 gatgataatt ccacgcgcca tttatggacc acctttagcg acgatcaaat tgacctcaat
     5221 taccgtagcc ctgaagtgtt gctggcgatg gtggatgtat tgctgtgcta cctggaaaag
     5281 ggcgcagagt atgtccgtct ggatgccgtt ggctttatgt ggaaagagct gggaacaagc
     5341 tgcatccatc tggaaaaaac acatctgatt atcaaactgt tacggtcgat tattgataac
     5401 gttgcgccag gtacagtgat cattaccgag accaatgttc cgcataaaga caacattgct
     5461 tactttggcg aaggcgatga cgaagcgcat atggtgtacc agttctcgct gccgccgctg
     5521 gtgttacatg cggtgcaaaa acagaacgtc gaggcgctgt gccagtgggc gcaaagtctg
     5581 agcttgccct ccggtaaaac gacctggttt aacttcctcg cctctcacga tggcataggg
     5641 ctaaacccgc tacggggctt gttgcctgaa agcgaaatat tagagctggt cgaggcgtta
     5701 cagcaggaag gtgcattagt aaactggaaa aataatcccg acggtacacg cagtccgtat
     5761 gaaataaaag tgacctatat ggatgcgtta agccgccgtg agagtagcga tgaagaacgt
     5821 tgcgccaggt ttattctcgc ccatgcgatt ttgttaagtt tccccggtgt acccgcgata
     5881 tatattcaaa gtattcttgg ctcgcgtaat gattacgcag gtgtcgaaaa actcggatat
     5941 aaccgtgcga ttaaccgtaa aaaatatcac agtgaagaga taacacgaga actgaacgat
     6001 gaagctacat taaggcatgc ggtatatcat gagttgtcgc gtttaattac acttcgtcgc
     6061 agccataacg agtttcatcc ggataataat tttaccatcg atacggttaa ttcatccgta
     6121 atgcgtattc aaagaagcaa cgttggtgaa ggcgcgtttt acgatggcgt actgcgtatt
     6181 gtgcgtaccg aagatggtag cgcatggacc ggtgttcctg tcagcgcctg gattggcggc
     6241 atctggtatc gcaaagatgt gctggcaaaa gcggggctgg aggagccgaa aaactggcaa
     6301 cagctgcttg acgttgcaca gaaactgaat gacccggcga ataaaaaata cggtattgcg
     6361 ctgcctacgg cagaaagcgt gctgacggaa caatccttct cccagtttgc gttatccaac
     6421 caggccaacg tctttaacgc cgaaggcaaa atcacccttg atacaccaga gatgatgcag
     6481 gcactgacct attaccgcga ccttgctgcc aacactatgc cgggttctaa cgacatcatg
     6541 gaagtgaaag acgcctttat gaacggcacc gcgccgatgg cgatttactc cacctatatc
     6601 cttccggctg tgattaaaga aggcgacccg aaaaacgtcg gtttcgtggt gccaaccgag
     6661 aaaaactctg cggtctacgg catgttgacc tcgctgacca ttaccgccgg gcaaaagacc
     6721 gaagagaccg aagcagcaga gaaatttgtc acctttatgg agcaggcgga caacattgcc
     6781 gactgggtga tgatgtcacc aggcgcagcg ctgccggtga acaaagcggt tgtcactacc
     6841 gctacctgga aagacaacga cgtgatcaag gcgctgggtg agctgccgaa tcagctaatc
     6901 ggtgaactgc caaatattca ggtctttggc gcagtagggg ataaaaacta tacccgcatg
     6961 ggtgatgtga cgggttctgg cgtggtgagt tctatggtgc ataacgtcac cgtgggtaaa
     7021 gccgatctcc ctggcacgct gcaagcgagc cagaaaaagc tggatgaact gatcgaacag
     7081 cactaaaccc aggacaggaa tccgcaatga acaggctttt ttcaggtcgt tccgatatgc
     7141 cctttgcgct gctgcttctc gcgcccagct tattactgct gggtggtctg gtggcctggc
     7201 caatggtgtc gaatatcgaa atcagttttt tacgtctgcc gctcaatccc aacatcgagt
     7261 caacctttgt tggggtgagt aactatgtgc gtatcctctc cgatcccggc ttctggcact
     7321 cgctgtggat gacggtctgg tataccgcgc tggtggtggc gggcagcacc gtgctcgggc
     7381 tggcagtggc gatgtttttc aaccgcgagt tccgtctgcg caaaaccgcg cgttcgctgg
     7441 tgatcctctc ctacgtaacg ccgtccatct cgctggtgtt tgcctggaaa tacatgttca
     7501 acaacggcta cggcattgtg aactacctcg gcgtcgatct tctgcatctc tatgagcagg
     7561 caccgctgtg gttcgataat ccgggcagta gctttgtgct ggtggtgctg ttcgccatct
     7621 ggcgctactt cccctatgcc tttatttcgt ttctggcgat tttgcagacc atcgacaaat
     7681 cgctgtacga agcggcagag atggatggcg ctaatgcctg gcaacggttt cgtatcgtca
     7741 cgctgcccgc gattatgccg gtcctggcga cggtggtgac cctgcgcacc atctggatgt
     7801 tctacatgtt cgcggatgtt tatctgctga cgaccaaggt cgatattctc ggtgtctatc
     7861 tctacaaaac cgcctttgcc tttaatgact tagggaaagc ggcggcgatc tcggtggtgc
     7921 tcttcatcat tattttcgct gtcattctgc tgaccaggaa acgggtgaac ctcaatggca
     7981 acaaataaac gcacgctcag tcgtatcggt ttttactgcg ggctggcgct gtttctcatc
     8041 atcacgctgt ttccgttttt tgtgatgctg atgacctcgt tcaagagcgc aaaagaggcg
     8101 atctcgctgc atcctacgct gctgccgcaa cagtggacgc tggagcatta tgtcgacatt
     8161 tttaacccgg tgattttccc gtttgtcgac tacttccgta acagcatggt ggtgtcggtg
     8221 gtttcatccg tggtggcggt atttctcggc attctcgggg cttacgcgct ttcccgcctg
     8281 cgctttaaag ggcggatgac catcaacgcc agcttttaca cggtgtacat gttctccggc
     8341 attttgctgg tggtgccgct gttcaaaatt atcaccgcgc tgggcattta cgacaccgag
     8401 atggcgctga tcattaccat agtgacgcaa accctgccca ccgccgtgtt tatgctgaaa
     8461 agctacttcg acaccatccc tgatgagatc gaagaagcgg cgatgatgga tggcctcaac
     8521 cgtctgcaaa tcatcttccg tatcaccgtg cccctggcga tgtccgggct gatatcggtg
     8581 ttcgtctact gctttatggt ggcgtggaac gactatctgt ttgcgtcgat tttcctctcc
     8641 agcgccagca atttcacctt accagtgggc ctgaacgcgc tgttcagtac gcctgattac
     8701 atctggggac ggatgatggc ggcctcgcta gtgaccgcat tgccggtggt gattatgtat
     8761 gcgctttcgg aacgttttat taagagtggt ttgaccgccg gtggcgtgaa gggctaaagc
     8821 ggccagtttc tttacaagga gttttaaatg aaaaagttag tagccacagc accgcttgtt
     8881 gctgcgctgg ttgagtatga agatcgggcg attttagcca atgaagtgaa gatccgcgtg
     8941 cgtttcggcg caccgaaaca cggaacggaa gtggtcgact tccgcgccgc cagcccgttt
     9001 atcgatgaag actttaacgg tgaatggcag atgttcaccc cgcgtccggc agatgcgccg
     9061 cgcggcattg agtttggcaa attccagctt ggcaacatgg tggttggcga cattatcgag
     9121 tgcggcagcg acgttactga ctacgcagtg ggcgacagcg tatgcggcta cggcccgctt
     9181 tccgaaacgg tcatcattaa cgcggtgaat aactacaagc tgcgcaaaat gccgcaaggc
     9241 agttcgtgga aaaacgccgt ctgctacgac ccggcgcagt ttgccatgag cggcgtgcgc
     9301 gatgccaacg tgcgcgtggg tgattttgtg gtggtggtag ggcttggcgc gatcggtcaa
     9361 attgccattc aactggctaa acgtgctggc gcgtcggtgg tgattggcgt cgatcctatc
     9421 gcccatcgct gtgatattgc ccgtcgccac ggcgcggatt tctgccttaa ccccattggc
     9481 actgacgtag gcaaagagat caaaacgcta accggcaagc agggtgccga tgtgattatc
     9541 gaaaccagcg gttacgccga cgcgctgcaa tcggcgctcc gcggtctggc ctacggcggc
     9601 accatctcct atgtcgcgtt tgccaaacca tttgctgaag gttttaacct cggacgcgaa
     9661 gcgcatttca ataacgccaa aattgttttc tcccgtgcgt gcagcgaacc gaacccggat
     9721 tatccgcgct ggagccgtaa gcgtattgaa gaaacctgct gggaactgct gatgaacggt
     9781 tatctcaatt gcgaagattt aatcgacccg gtagtgacct ttgccaagag cccggaaagc
     9841 tacatgcagt atgtcgatca gcatccggaa cagagcatca aaatgggcgt tacgttttaa
     9901 ttcaaaggaa tgaaaatagg cacacagaat caggcattct ttccggaaaa tatccgcgag
     9961 aaatttcgtt atatcaaaga gatgggcttc gatggttttg agattgacgg caaactgctg
    10021 gtcaacaact tcgaagaagt caaagcggcg attaaagaaa ccggtttacc ggtgaccacc
    10081 gcctgcggtg gctatgacgg ctggattggt gactttattg aagagcgtcg tcttaatggc
    10141 ttaaagcaga tcgaacgcat tctcgaagcg ctggcagaag tggggggtaa gggtatcgtc
    10201 gttccggcag cgtggggcat gtttaccttc cgcttaccgc cgatgacctc gccgcgcagc
    10261 ctggacggcg atcgtaaaat ggtgagtgat tccctgcgcg tacttgaaca ggtcgccgcg
    10321 cgtaccggaa ccgtggtgta tctcgaactg ttaaaccgct atcaggatca tatgatcaac
    10381 actctcgccg atgcccgccg ttacatcgtc gaaaacgatc ttaaacatgt acagattatc
    10441 ggcgatttct atcacatgaa tatcgaagaa gataacctgg cgcaggcgct gcatgacaac
    10501 cgcgacctgc tcggtcatgt gcatattgcg gataaccatc gctaccagcc gggcagcggc
    10561 accctggatt tccacgcgct gtttgaacag ctgcgcgcgg ataactatca gggctatgta
    10621 gtgtacgaag ggcgtatccg ggcggaagat cctgtccagg cgtaccgtga ttctttggcc
    10681 tggttgcgta cctgctaaga ggtctttgtg aaaagtgcaa tgacaagctc tccgctgcgg
    10741 gtcgcgataa taggcgcagg ccaggtggcg gataaggttc atgcttcgta ctactgcacc
    10801 cgcaacgatc tggaactggt ggctgtctgt gacagccgcc tttcccaggc gcaggcgctg
    10861 gcagaaaaat acgggaatgc atccgtgtgg gacgatccgc aggccatgct gctggcggtg
    10921 aaaccttatg tggttagcgt ctgctcacct aaccgttttc attacgaaca taccctgatg
    10981 gcgctggaag cgggctgcca tgtgatgtgc gaaaaaccgc ccgccatgac gccagaacag
    11041 gcgcgggaaa tgtgcgatac cgcgcgcaaa ctgggcaagg tgctggccta cgactttcac
    11101 catcgttttg cgctcgatac gcaacagttg cgtgaacagg tgaccaacgg cgttttggga
    11161 gagatttacg ttaccaccgc ccgcgccctg cgtcgctgcg gcgttcccgg ctggggtgtc
    11221 tttaccaata aagaactgca gggtggtggc ccgctgatcg acatcggcat tcatatgctg
    11281 gatgctgcga tgtatgtgct gggctttccg gcggtgaaaa gcgtgaatgc gcatagcttt
    11341 caaaagatcg gcacgcaaaa gagctgtggt caatttggcg agtgggatcc ggcaacttac
    11401 agcgccgaag attcgctgtt tggcaccatt gaatttcata acggcggcat tctgtggctg
    11461 gaaacgtcat ttgcactcaa catccgcgaa cagtcgatta tgaacgtcag cttttgtggt
    11521 gataaagccg gtgcgacgct gtttccagca catatctaca ccgataacaa cggtgaatta
    11581 atgacgctga tgcaacggga actggcagac gacaaccgcc atttgcgcag catggaagcc
    11641 tttatcaatc acgtacaggg caagcccgtg atgatagccg atgccgagca ggggtacatc
    11701 atccagcaac tggtggcggc gttgtatcaa tccgcagaaa cagggacgcg tgtggaatta
    11761 tgaccaggcc agtaacgtta tcagaacccc atttcagcca gcataccctg aacaagtatg
    11821 catcgctgat ggcgcagggg aacggctatc ttgggcttcg cgccagccat gaagaagatt
    11881 acacgcgcca gacgcgaggg atgtatctgg cggggctgta tcatcgggcg ggaaaaggtg
    11941 aaatcaacga actggtgaac ctgcctgatg tcgtggggat ggagattgcc ataaatggtg
    12001 aggttttctc gttatcccgc gaagcctggc agcgtgaact tgactttgcc agtggagaat
    12061 tacgccgtag cgttgtctgg cgtaccagca acggcacagg ttacaccatc gccagccgtc
    12121 gctttgtttc ggcagaccaa ctgccgctca ttgtgctgga aatcactatt acgccactgg
    12181 acgccgacgc gtcagtgctg atttcaacag gcattgacgc cacgcagacc aaccacggtc
    12241 gccagcatct cgacgaaacc caggtgcggg tgtttggtca gcatttgatg caggggatct
    12301 acaccaccca ggatggacgc agtgatgtgg ccatcagctg ttgctgtaag gtgagcggtg
    12361 atgtgcagca atgctatacc gccaaagagc gccgtttact gcaacatacc agtgcgcagc
    12421 ttcatgcagg cgagacagtg acgttgcaaa aactggtgtg gatcgactgg cgggatgaca
    12481 ggcaagccgt tttagacgag tggggcagcg cgtcgcttcg ccagcttgaa atgtgcgcgc
    12541 agcagagtta cgaccaactt cttgcagtat caacagaaaa ctggcgtcaa tggtggcaga
    12601 aacgtcgtat cacggtaaat ggcggcgaag cgcacgatca gcaagcgtta gattatgcgc
    12661 tttatcatct gcgcatcatg acgcctgccc acgacgagcg cagcagcatt gcggcaaaag
    12721 gcttaaccgg cgaaggctac aaaggccacg ttttctggga tacagaagta tttttgttac
    12781 cgtttcatct gtttagcgat ccgacggttg cccgaagttt actgcgttat cgctggcaca
    12841 acttgccagg cgcgcaggag aaagcgcgac gcaacggctg gcagggcgcg ctatttccgt
    12901 gggaaagcgc gcgcagcggc gaagaagaga cgccggaatt tgccgccatt aacattcgca
    12961 ccgggctgcg gcaaaaagtg gcctcggcgc aggcggaaca tcatctggtg gccgatatcg
    13021 cctgggcggt tattcaatac tggcagacca cgggggatga aagtttcatt gcgcatgaag
    13081 gcatggcgct acttctggaa actgcaaagt tctggattag ccgcgcggtg agggttaacg
    13141 accgtctgga aattcatgat gttattgggc ctgacgaata taccgaacat gtcaataata
    13201 acgccttcac cagctatatg gcgtattaca acgtccagca ggcgctgagt attgcccgcc
    13261 agtttggctg tagcgacgac gcgtttattc atcgtgccga aatgttcctt aaagaactgc
    13321 ggctgccaga aattcagccc gacggcgttt tgccgcagga tgattcgttt atggctaagc
    13381 cggcgattaa tctggcgaaa tacaaagcgg cggcggggaa gcaaaccatt ctgctggatt
    13441 attcacgcgc agaagtgaac gagatgcaaa tcctcaaaca agctgatgtg gtgatgctca
    13501 attacatgct gccggagcag ttctcagcgg catcgtgtct tgccaatctg caattttatg
    13561 aaccgcgcac tattcacgac tcgtcattaa gtaaagcaat ccacggcatt gttgccgcac
    13621 gctgtggcct gctgacccaa agttatcagt tctggctcga ggggactgaa atcgatcttg
    13681 gtgctgatcc gcatagttgt gatgatggta tccatgctgc cgcaactggc gctatctggc
    13741 tgggggcgat tcagggtttt gccggggtga gcgtgcgtga cggtgaattg catctcaatc
    13801 cggcgttacc tgagcagtgg caacagttgt ctttccctct gttctggcag ggctgcgaat
    13861 tacaggtcac tcttgacgcg cagcgtattg cgattcgaac ttctgcgccc gtttcactgc
    13921 gtttgaacgg tcagcttata tctgtggctg aagaatctgt tttctgtttg ggtgatttta
    13981 ttttgccctc caatgggacc gccaccacac atcaggagga tgaatgaaac tgcaaggggt
    14041 aattttcgat ctggatggtg taatcaccga taccgcgcat ctgcatttcc aggcgtggca
    14101 gcagattgcc gctgaaattg gcatcagcat tgatgcgcag tttaacgaat ccctaaaagg
    14161 gatcagccgc gatgagtctc tgcggcgcat tctgcaacac gggggcaaag agggcgactt
    14221 taactcgcag gagagggcgc aactggcgta tcgcaaaaat ctgctctatg tccactcact
    14281 gcgcgagttg acggtcaacg ctgttctacc cggcattcgc tctttgctgg cagatctccg
    14341 tgcacagcag atctcggttg ggctggcttc tgtctccctc aatgcgccga cgattttaga
    14401 tgcactggag ctgcgtgagt ttttcacctt ctgcgcggat gcttcccaac ttaaaaactc
    14461 gaaaccggat ccggaaatct ttctcgctgc cggtgccggg ctgggcgtgc cgccgcaggc
    14521 atgtatcggc attgaagatg cgcaggcggg cattgacgcc attaacgcca gcggtatgcg
    14581 ctcggtgggg atcggcgcgg gcataaccgg ggcgcaatta ctattgcctt caacggactc
    14641 cctgacctgg tcgcggttat cggccttctg gcaaaacgta tagcaaagga atcaacatgg
    14701 ctcagctttc gttacaacat attcaaaaaa tctacgataa ccaggtgcat gtggtgaagg
    14761 acttcaacct ggaaattgcc gataaagagt tcatcgtgtt tgtcggcccg tcgggctgcg
    14821 gtaagtcgac caccctgcgc atgattgccg ggcttgagga gatcagcggc ggcgatctgt
    14881 tgatcgacgg caaacgaatg aatgacgttc cagccaaagc acgcaatata gcgatggtgt
    14941 tccagaacta cgcgttgtat ccgcatatga cggtttacga caacatggcg tttggcctga
    15001 agatgcaaaa aatcgccaaa gaggtgattg atgagcgggt gaactgggcg gcgcaaattc
    15061 tcggcctgcg tgagtacctg aaacgcaagc cgggcgcgct ttccggcggg caacgccagc
    15121 gtgtggcgct cgggcgggcg attgtgcgcg aagcgggcgt gtttttaatg gatgaaccgc
    15181 tctctaacct tgatgccaag ctgcgcgtgc aaatgcgcgc agagatcagc aagctgcacc
    15241 agaagctgaa taccaccatg atctacgtga cccacgatca gaccgaagcg atgaccatgg
    15301 cgacgcggat tgtgattatg aaggatggga ttgttcagca agttggtgcg ccgaaaacgg
    15361 tttataacca accagcgaat atgtttgttg ccggatttat tggatcaccg gcgatgaatt
    15421 ttattcgtgg cacgatcgat ggcgataaat tcgttacgga aacgcttaaa ttaaccattc
    15481 ccgaagagaa attagcggtt ctgaaaacac agggaagttt gcataagccc atcgtgatgg
    15541 gaatacgtcc ggaagatatt catccggacg cgcaagagga aaataacatt tccgccaaaa
    15601 ttagcgtggc agaattaacc ggtgcggagt ttatgctcta caccacggtt ggggggcacg
    15661 agttagtggt ccgtgctggt gcgttaaatg attatcatgc aggagaaaat atcactattc
    15721 attttgatat gactaaatgt catttctttg atgcagaaac ggaaatagca cttcgctaaa
    15781 tacaggggga aggcattccc ccaggataat acaaggaaca ataatgaaaa agttattacc
    15841 ctgtaccgca ctggtgatgt gtgcgggaat ggcctgcgca caggccgagg aaaagaacga
    15901 ctggcacttt aatatcggcg cgatgtacga aatagaaaac gtcgagggtt atggcgaaga
    15961 tatggatggg ctggcggagc cttctgtcta ttttaatgcc gccaatgggc cgtggagaat
    16021 ttctctggcc tattatcagg aagggccggt agattatagc gcgggtaaac gtggaacgtg
    16081 gtttgatcgc ccggagctgg aggtgcatta tcagttcctc gaaagcgatg atttcagttt
    16141 cggcctgacc ggcggtttcc gtaattatgg ttatcactac gttgatgaac cgggtaaaga
    16201 cacggcgaat atgcagcgct ggaaaatcgc gccagactgg gatgtgaagc tgactgacga
    16261 tttacgtttc aacggttggt tgtcgatgta taaatttgcc aacgatctga acacgaccgg
    16321 ttacgctgat acccgtgtcg aaacggaaac aggtctgcaa tataccttca acgaaacggt
    16381 tgccttgcga gtgaactatt atctcgagcg cggcttcaat atggacgaca gccgcaataa
    16441 cggtgagttt tccacgcaag aaattcgcgc ctatttgccg ctgacgctcg gcaaccactc
    16501 ggtgacaccg tatacgcgca ttgggctgga tcgctggagt aactgggact ggcaggatga
    16561 tattgaacgt gaaggccatg attttaaccg tgtaggttta ttttacggtt atgatttcca
    16621 gaacgggctt tccgtttcgc tggaatacgc gtttgagtgg caggatcacg acgaaggaga
    16681 cagtgataaa ttccattatg caggtgttgg ggtgaattac tcgttctgat catgtgctaa
    16741 attgccggat gcggcgcgag tactttatcc gaactataaa tgtaggccgg ataagatgcg
    16801 ctagcatcgc atccggcatt caggcaaggt agctggtatt tatttcagcg tcatatgcgt
    16861 ggcaacggta atattctgtg gtgacggttt tccagaaatt aagcggaata ataactcgca
    16921 gctttgttga cctaactcct gcgtcggaac atcgatgccg cccggtgcag gcgttaaaat
    16981 aaatgacagc gtttcattgc tataacccac caccgctaac tgctgcggaa tagcaatatt
    17041 tttctctgct gccgcacgat aaatgctcat taatttcagg ctgtcagtag caaagacggc
    17101 ttctggcaac ggtgactggc ttaataattc tctcgcggct tgcagtgctg tttcatgggt
    17161 ataaccgcca tcaacaatcc attcatcacg cactgcaata ttatgcgcgg acagactttg
    17221 cttatagcca ttaacgcggt caaccgaaac atggacatca agcggagcat gcaggcaggc
    17281 aatattttta tgtccattct caattaatgc atcggttagc gcaatgctgt caccaaaatt
    17341 atcggtatcg acagaataaa catgggcata ttgaccttca actttgccaa tcaccacgac
    17401 aggaatatcg tatttatcaa gttgggcaaa aaatgactca tccgctggcg aacttagcat
    17461 aataatgcct ttaatcattt tctgcttaat tttgctttca catttttgta agtcttctgc
    17521 cgggttgtgc gacgtctgca atatcacgtc gaaaccttct tcttcagctt tggcggtgat
    17581 gacatgcaaa acttcagaga aaaacggatt acccgccgta gttttggtcg aacgggtaga
    17641 aatcaccata atggcatcaa aacccgaaga ggtcaacgcg cgggccagct tgtttggttg
    17701 atactgtaat tcttcaatgg cccgtaacac tttttcgcgc gcttccgggg agatattggt
    17761 ttgcttattc agcacgcgtg atacggtgga ttttgatacg cctgcaaccc tggcaatatc
    17821 ataaatagta ggggacatag gtcaggaact ccgtccgaac gtgaatgctg cacatcttat
    17881 ggagttcgcc cgtcgatgac aacacgggca gttgataatc aattgcctgg cccccacatt
    17941 catatcctta cgaatgattt ttttctggtc ttcagagcag cacaggacag caatgaagcg
    18001 acttaaaaat gaacttaatg cgctggtgaa tcggggtgtc gacagacatc tgcgcctcgc
    18061 cgtaaccgga cttagccgca gcggcaaaac agcgtttatc accgcgatgg ttaatcagtt
    18121 gctcaatatt catgccggag cacgcttgcc gctgttaagc gcggtgcgtg aagagcgcct
    18181 gctgggcgta aaacgcattc ctcagcgtga ctttggcatt ccgcgcttca cctatgatga
    18241 aggactggcg cagttatatg gcgatcctcc cgcctggccg acgcctacgc gcggcgtcag
    18301 tgaaattcgc ctggcgttac gttttaaatc gaacgattcg ctgctgcgcc actttaagga
    18361 tacctccacg ctgtatctgg aaattgtgga ttatcccggc gaatggttgc tcgacctgcc
    18421 gatgctggcg caggattact taagctggtc gcgccagatg acgggcttac tcaatggtca
    18481 gcgcggcgaa tggtcggtga aatggcgaat gatgtgcgaa gggctggatc cgctagcgcc
    18541 tgccgacgaa aaccggctgg cagacattgc cgccgcctgg accgagtatc tccaccactg
    18601 caaacagcag gggttgcact ttattcagcc tgggcgcttt gtcttgccgg gagatatggc
    18661 aggagcaccc gcgctgcaat tcttcccgtg gccggatgtc gatgcttggg gcgagtccaa
    18721 actggcgcag gccgataagc acaccaatgc cggaatgctg cgcgagcggt ttaattatta
    18781 ctgcgagaag gtggtgaagg ggttctataa gaatcatttt ctgcgctttg accgccagat
    18841 tgtgctggtg gattgcctgc aacctctcaa cagtgggcca caggcattta atgatatgcg
    18901 tctggcgctg acgcagctga tgcaaagttt ccactacggg cagcgtaccc tgttccggcg
    18961 tttgttttcg ccggttatcg ataagctatt gtttgctgcc actaaagcgg accatgtgac
    19021 catcgatcag cacgccaata tggtttcatt actgcaacaa ctgattcagg atgcctggca
    19081 aaatgcggcg tttgaaggga ttagtatgga ttgcctgggg ctggcctcgg tgcaggcgac
    19141 caccagcggc attattgacg tcaacggcga gaaaattccg gcattgcgcg gtaaccggct
    19201 cagcgatggt gcgcctctca ccgtttatcc cggtgaagtt cctgcgcgtt tgcccggtca
    19261 ggcgttctgg gacaagcaag ggttccagtt tgaagcgttt cgcccgcagg tgatggatgt
    19321 cgacaaaccg ctgccgcata ttcgtcttga tgccgcgctg gaatttttaa taggagataa
    19381 attgcgatga ccgaaccgtt aaaaccacgt attgatttcg acggtccgct ggaggtcgat
    19441 cagaatccaa aattcagggc gcagcagacc tttgacgaaa atcaggcgca aaattttgcc
    19501 ccggccacgc tcgatgaagc tcctgaagaa gaggggcaag ttgaagcggt aatggatgca
    19561 gcgttacgtc cgaaacgcag cctgtggcgc aaaatggtga tgggcgggct ggctctgttt
    19621 ggcgcaagcg ttgtcgggca gggtgtacag tggacaatga atgcctggca aactcaggac
    19681 tgggtggcgc tgggtggatg tgccgctggg gcattgatta tcggcgctgg cgtaggttct
    19741 gtggtaacag agtggcggcg cttatggcgc ttgcgacagc gcgcccatga acgcgacgaa
    19801 gcgcgtgatt tattgcatag ccacggcacg ggcaaaggcc gcgcattttg cgaaaaactg
    19861 gcgcagcagg cgggtattga tcagtcacat ccggcgctgc aacgctggta tgcctcaatc
    19921 catgaaacgc aaaacgaccg tgaagtggtc agcctgtatg cgcatttggt ccagccagtt
    19981 ttagatgccc aggcgcggcg cgaaatcagc cgttcggcgg cggaatcaac gttgatgatt
    20041 gcggtcagcc cgctggcgtt ggtcgatatg gcatttatcg cctggcgcaa tctgcgttta
    20101 attaatcgca tcgccacgct gtatggcatt gaactggggt attacagccg tttgcgtctg
    20161 tttaagctgg tattgctgaa tatcgctttt gccggagcca gcgaactggt gcgcgaagtg
    20221 gggatggact ggatgtcgca agatctcgct gctcgtttgt ctacccgcgc agctcaggga
    20281 attggtgctg gacttctgac ggcacgactc gggattaaag ctatggagct ttgccgcccg
    20341 ctgccgtgga ttgacgatga caaacctcgc ctcggggatt tccgtcgtca gcttatcggt
    20401 caggtgaaag aaacgctgca aaaaggcaaa acgcccagcg aaaaataatg caatatcggg
    20461 tgctgaccgg atatctttac gccgaagtgc ccgtttttcc gtctttgtgt caatgattgt
    20521 tgacagaaac cttcctgcta tccaaatagt gtcatatcat catattaatt gttctttttt
    20581 caggtgaagg ttcccatgcg tctggaagtc ttttgtgaag accgactcgg tctgacccgc
    20641 gaattactcg atctactcgt gctaagaggc attgatttac gcggtattga gattgatccc
    20701 attgggcgaa tctacctcaa ttttgctgaa ctggagtttg agagtttcag cagtctgatg
    20761 gccgaaatac gccgtattgc aggtgttacc gatgtgcgta ctgtcccgtg gatgccttcc
    20821 gaacgtgagc atctggcgtt gagcgcgtta ctggaggcgt tgcccgaacc tgtgctctct
    20881 gtcgatatga aaagcaaagt ggatatggcg aacccggcga gctgtcagct ttttgggcaa
    20941 aaattggatc gcctgcgcaa ccataccgcc gcacaattga ttaacggctt taatttttta
    21001 cgttggctgg aaagcgaacc gcaagattcg cataacgagc atgtcgttat taatgggcag
    21061 aatttcctga tggagattac gcctgtttat cttcagggtg aaaatgatca acacgtcctg
    21121 accggtgcgg tggtgatgtt gcgatcaacg attcgtatgg gccgccagtt gcaaaatgtc
    21181 gccgcccagg acgtcagcgc cttcagtcaa attgtcgctg tcagcccgaa aatgaagcat
    21241 gttgtcgaac aggcgcagaa actggcgatg ctaagcgcgc cgctgctgat tacgggtgac
    21301 acaggtacag gtaaagatct ctttgcctac gcctgccatc aggcaagccc cagagcgggc
    21361 aaaccttacc tggcgctgaa ctgtgcgtct ataccggaag atgcggtcga gagtgaactg
    21421 tttggtcatg ctccggaagg gaagaaagga ttctttgagc aggcgaacgg tggttcggtg
    21481 ctgttggatg aaatagggga aatgtcacca cggatgcagg cgaaattact gcgtttcctt
    21541 aatgatggca ctttccgtcg ggttggcgaa gaccatgagg tgcatgtcga tgtgcgggtg
    21601 atttgcgcta cgcagaagaa tctggtcgaa ctggtgcaaa aaggcatgtt ccgtgaagat
    21661 ctctattatc gtctgaacgt gttgacgctc aatctgccgc cgctacgtga ctgtccgcag
    21721 gacatcatgc cgttaactga gctgttcgtc gcccgctttg ccgacgagca gggcgtgccg
    21781 cgtccgaaac tggccgctga cctgaatact gtacttacgc gttatgcgtg gccgggaaat
    21841 gtgcggcagt taaagaacgc tatctatcgc gcactgacac aactggacgg ttatgagctg
    21901 cgtccacagg atattttgtt gccggattat gacgccgcaa cggtagccgt gggcgaagat
    21961 gcgatggaag gttcgctgga cgaaatcacc agccgttttg aacgctcggt attaacccag
    22021 ctttatcgca attatcccag cacgcgcaaa ctggcaaaac gtctcggcgt ttcacatacc
    22081 gcgattgcca ataagttgcg ggaatatggt ctgagtcaga agaagaacga agagtaagcg
    22141 cgaatatgcc tgatggtgca acaccatcag gcatattaac ttatgctttc agtacagcca
    22201 gagctgcttc gtaatccggc tcggtggtga tttcatccac cagctggctg aaaatcacat
    22261 tgtcattttc gtcaataacc acaacggcac gcgctgccag acctttcagt gggccatcag
    22321 caattgccac accgtaggct tgcagaaatt cagcgttacg gaaagtggag agggtgataa
    22381 cgttgttcag accttctgcg ccgcagaaac gagactgggc gaacggcaga tcggcagaga
    22441 tacacagcac aacggtgttg tcgatctcgg ttgccagttg gttaaactta cgtactgatg
    22501 cggcgcaaac accggtatca atactcggga aaatgttcag cactttgcgt ttacccgcaa
    22561 actgaccgag ggtgacgtca gacagatctt ttgccacgag agtaaaagtc tgcgctttgc
    22621 tacccgcctg cgggatggaa ttggcgactg taaccgggtt gccctggaaa tgaacggttt
    22681 gtgacatgat tatctttcct gtttacatat agttaacgtc acacctagtt tatgctaact
    22741 gtcaataaca cagcaaacgc tatttgcgct taatccgcag accaccgcga caacaaggag
    22801 taaagatgag aaccgttaag gtattcgagg aagcctggcc cttacatacc ccgtttgtga
    22861 ttgcccgggg aagtcgcagt gaagcgcgcg tggtggtggt tgaactggaa gaagagggta
    22921 ttaaaggcac cggcgaatgc acgccgtatc cgcgttatgg ggaaagtgat gcctcggtaa
    22981 tggcgcaaat tatgagcgtc gtgccgcaac tagagaaagg gctgacacgg gaggagttgc
    23041 aaaaaattct ccctgccggc gcagcacgta atgcgctgga ttgtgcattg tgggatctgg
    23101 cggcgcgaag acagcagcaa tcgctggctg atttgatcgg cataacgctt cccgagacag
    23161 ttatcactgc acagacggtt gtcatcggta cgcctgatca gatggccaca atagtgcatc
    23221 aacactctgg caggcaggcg cgaaattact gaaagtgaag ctggataacc atcttattag
    23281 tgagcggatg gtggcaattc gcacagctgt gcccgatgcg acgctgatcg ttgatgcaaa
    23341 tgaatcctgg cgtgcagaag ggttggcggc gcgttgccag ctattggcgg atttaggcgt
    23401 tacgatgctt gaacaacccc ttcctgcgca ggacgatgtg gcgctggaga attttattca
    23461 tccgttgccg atttgtgctg atgaaagttg tcatacacgt agcaatctga aggcgctgaa
    23521 agggcgctat gagatggtta acattaagct cgataaaacc ggtggtctga cggaagcgct
    23581 ggcgctggcg actgaagcgc gtgcacaagg tttcagtctg atgctgggct gcatgttgtg
    23641 tacctctcgt gccattagcg ccgctttacc gctggtgccg caggtcagtt tcgccgatct
    23701 tgacggaccg acctggctgg cggtagatgt ggaaccggcg cttcagttca cgacgggcga
    23761 attgcatctt taggatgcca gcacagcaag tttgccatcg caaagagata tttttcgctg
    23821 gcttcgtcgg aggagatggg cggaaactct gcggtgatgc aatgcaagtt gagatctgca
    23881 caccaactgc cgaaagagcc aggcgtttca taaccgacgc tggttaccag aggcaattca
    23941 aacgcctggg ccagccattc gcctaattcg ctgtgtctgg gatcttcaat acaggccagt
    24001 ggatcgtgga atgagaccac ccaggcaggt tgaatgcggt gtataagctg gcacagcgcc
    24061 tgggtttcag gttcgagcca ggtttgtcac ctgtcagtaa tacgacatca cgttcttcag
    24121 cggcgctgtt ccagcgataa accgtttcac cttccttcca gttcgccgcc ggaaagtttc
    24181 tgtttaaatc cacaccatta gcattggccc gtaaccccag ctggcagccg tcaggattca
    24241 cacacagcac cacatgatgg cggcgcaaag aaggtgtcaa agtccgcaga gcacaggaga
    24301 gcgtgacgac cgaagagttt tcatcaccgt gagtgccagc cataatcaaa ccactttcgc
    24361 gactggctgc agtggccgga aaccagatta acggcgcgcc caataatgaa cgtccgtaat
    24421 gttctgttcc gggcggaaat gcgccgcgtt cggcgcgtgg gcggtttacg gtcatgatcg
    24481 tctctggttc aggaagtatt acaggcagtg ttgtgcaaat tttgcggatt atcaaatcct
    24541 tttcttcaac gctatgtcat cgatcttgta tcacttttct gccggaagtt gtttgcattt
    24601 ttattgatgt gcagatatta gaattatgct gacttagatg taagtcgtaa tgttatatac
    24661 atggcgtatt ttattcttac tggttctaca catgttaatc gcatcggatt gatcagttca
    24721 ccttaataag tttaataaat cgtactgcac atagtacatt acgatggtaa ctatttaatt
    24781 gatttacatg aataatggct tgtcaccatc agtcacgggt tgattgatac ctatattctc
    24841 accaatgtgt ttctcaggtt tatcgatgat atctgtgatt aatgctgcga cactcttacg
    24901 tgatacgatc gtacccttga atggttcatt gcgtgaggta agctcataat caataatatc
    24961 ttcatcagtc agccaggcag ggcgaagaat tgtatattcc agcccagaag cctcaattgc
    25021 atccgcagcc ctgcggaatg gttttagggg ctcaccaata actgcattat tccattcgcc
    25081 aaattttcct ggaacttcat cataaatacc gagggaaaga acaaagatca gacgtttaac
    25141 atcacaggct ttcatcgcag cgatcactga atttgcctga atatctaaat cttcccccgt
    25201 aaggttggca tacacaacgt cctgtccctg catggcctgc ttcagtgctg catgattcag
    25261 tacatccccc ataataatct tgctattagt tggatagggt ttgtggattt ttgctggctg
    25321 acgggcaaat aaagtttgtt taatggtttg tttatctgcc agttgattaa tcacatggcg
    25381 ggctatctga ccgccagcac caagaatcag tacatttttc ataatatttc tcatgaaact
    25441 tatcccagat gggtgttgaa aaaaggaata acttttgcca gcgcctcctg aactgcttcc
    25501 ggtttgtcat atagttcata atgtgagaaa tcgggtaacg aaactaactg acgatcctgc
    25561 gaaaccatcg ctcggccata gacttccagt ccatcacgat aagcaccgaa ggcaccgact
    25621 ttttcaccaa ctactaccat caccggctgg gtcagtaaca cttcagtaaa tgcgaaggca
    25681 tcccaggcca gcgttttctg tgcatgtgag aacaacattt ttgtcgcacc tcccggttgt
    25741 tgcccgcgtg gtgttttata gtagtcagtt gcttcataaa catcgcgttc ggtcagtcca
    25801 tgggcttttg ctgcatccag gctggaggga agtaattcgt tgatctgtaa ttctccacca
    25861 cgagcctctt ttgttcgttg tgacgccatt gcattcaata cgccaatcgg atcgtaattg
    25921 ctgaaacctt cccgaaaaag acgcccgata ttaacacccg taatactcac tactgcttta
    25981 attcgttttt ctgtcagcgc ggcattaatg gcatagccac cacccccaca cactcccagc
    26041 acgccaatac gttcagcatc aacatatggc agagttactg cataatcgat aacacggcta
    26101 atatcctcta cgcgctgtgt cggatcttct atccagcgag gctccccacc agattttccc
    26161 tggaaactgg cgtcataagc gagaacgaga tagccttttt cagccaatgc tttgccatag
    26221 atattgccag acgtctgctc cttacaactg ccaaaaggat ggacgctgat aatcgccgga
    26281 tactgttttg actcatcaaa atttggtgga aactgaatat tggcagcaat atgccaggcc
    26341 atatcactat tgcggatttg aatatgtttc attacagagt ttcctcaaag aacggagcta
    26401 atactgaaat tgcttcagcc acataggctt tgccgtcata aagatccata tggtttgcgc
    26461 cttcaacaat gtgatagcgt ttattctggc ttgatgcccg atcgtacagg tcgtcactca
    26521 tccatttgct ccctgcctgg ctgcccgcca caatctgcat cggctgagtc aggtacactt
    26581 ccgccatatg gtaagcatca taggtaataa tctggttaag gctgcgcaaa gtagcgtaac
    26641 ccggtgctgt tggatactgc gcacgaggtg tgtggtaata ctcccaggcc tgacgcagtt
    26701 cttcgttcgg cgcatcggcc tccttcattg gagccagtgg cataatggcg tattcttcgc
    26761 tgctaatatc gctggttcgg gcgtttgagc cagcttcaat gtgtggcaga gcatcaatag
    26821 atttcacatt gttttcccaa ccattgcgga acatcgaacc aatattgacc gcactaacgg
    26881 taccgatggc cttgatgcgg cgatcctgaa ttgcagcatt ggctgtatat cctgcaccgg
    26941 cacaaattcc catcgcacca attcgggtat tgtcgacata agaaagcgtt gtcaggtaat
    27001 caatcacggc actgacgtct tcagtacgaa tgtatgggtt ttctaactga cgcggctcgc
    27061 cgccgctttc accttgataa gatgcgtcat aagcaatagt gacaaattcc ttttccgcca
    27121 gtttttcggc ataggttcca gccgtttgct ctttaacgcc cccacctggg tgagatacca
    27181 caattgccgg atactgacgg gtttcatcaa attttggagg gaaatagatc actgcagaca
    27241 aagagatggt tggattattg ctgttagtga agctgacttt attattcatc attccgttcc
    27301 tcatggagtt gtcggttcgt tttgacggtt ggtgatatca ctatagatat tgatcattaa
    27361 gttgattaga cccaaaatca tgattagacc tatcatttaa atgattaata gattgcatgg
    27421 agatactgaa tgaagcgtga agaaatcgct gatctgatgg cgtttgtcgt cgttgcagag
    27481 gagcgtagct tcactcgcgc agcagcccgc ctgagcatgg cgcagtcagc tttaagccag
    27541 atagtgcgcc gtatagaaga acgattggga ttgcggcttc tgacccgaac cacgcgcagt
    27601 gttgtaccca ctgaagcggg cgagcacctt ttgtctgttc ttggccctat gctgcatgac
    27661 atagattctg ccctggcatc cctgagcgat ctgcagaacc gcccatccgg gacaatacgt
    27721 attactactg tagaacatgc agcaaaaacg atattgttac cagccatgcg cacattcctg
    27781 aaatcacacc ctgaaattga tattcagctt atcattgatt atggtttgac tgatgtcgtt
    27841 tctgagcgtt ttgatgcagg cgtccgtctg ggtggggaga tggataaaga tatgatcgcc
    27901 attcgaatcg ggccagatat accaatggct attgttggct caccggatta tttttcccgc
    27961 cgaagtgttc caacgtcagt gtcacaatta atagatcatc aggcagttaa tttgtatctt
    28021 cccacatcgg gtacagcaaa tcgctggaga ttaatacgcg gtggacgcga agttcgtgtt
    28081 cgcatggaag gtcagctttt actgaatacg atagacctga tcattgatgc tgcaattgat
    28141 gggcatggat tggcgtatct accttatgat caggttgaac gggctattaa agaaaaaaaa
    28201 ctgatacgtg ttctggataa atttacacca gatttacccg gttatcacct gtactatccg
    28261 catcgtcgac atgctggctc ggcattctca ttatttatag atagagtgaa gtataaaggt
    28321 gctgtttagc actacttgct gatacattaa tttaattctt ctcttaacgt attctcagtt
    28381 cctttcaacg ttttggttat tttttattct tcgtacaatg gcgacagatg ctgattatga
    28441 taccgaaaac gggtttgaac gtgcgaagcc cgaacgtagt gttcggtgct ctatgtgctt
    28501 tgccgcattt tggcgtcgat tatttacact aaatctgatt taatatattg atacataaaa
    28561 cattttatgc ttcctgtgtc acttttttga tggaagttgt ttgcatttct ttaaggcgaa
    28621 acaaataatt acgcatcaat tttaatgtcg gttagaggga aacttatgaa gcactctgtt
    28681 tcagtcacgt gttgtgcgct gttggtcagc agcatttctc tttcgtatgc tgcagaagtt
    28741 ccgagcggca cagtactggc agagaagcag gagctggtgc gccacattaa agatgagcct
    28801 gcgtcgctgg atcccgctaa agccgtgggc ctgccagaga ttcaggtcat tcgcgatctg
    28861 tttgaaggac tggtgaatca gaacgagaaa ggggagattg tccccggcgt tgcgactcag
    28921 tggaaaagta atgacaaccg tatctggact tttaccctgc gcgataacgc aaaatgggcg
    28981 gatggaacac cggtaacggc gcaagatttt gtctacagtt ggcagcgtct ggtggacccg
    29041 aaaacgctat cgccatttgc atggtttgcc gcgctggcgg gaatcaacaa cgcacaggcg
    29101 attattgatg gtaaagctac gcctgaccag cttggcgtca ccgcagttga tgcccatacc
    29161 ttgaaaattc agcttgataa accgttgccg tggtttgtga atttaaccgc taactttgcc
    29221 ttcttcccgg tgcaaaaagc caacgtagaa agcggtaaag agtggacgaa acccggaaat
    29281 ctgatcggca atggcgctta tgttcttaaa gaacgcgtag tcaatgaaaa actggtcgtg
    29341 gtaccgaata cccattattg ggataacgcc aaaacggtac tgcaaaaagt gaccttcctg
    29401 ccaattaatc aggaatccgc agccactaag cgttacctcg cgggggatat tgatatcacc
    29461 gaatccttcc cgaaaaatat gtatcagaag ctgttgaagg atattccggg gcagatttat
    29521 acgccgccgc agctcgggac ctattattat gcgtttaaca cgcaaaaagg gccgacggca
    29581 gatcagcgcg ttcgtctggc attaagtatg acgatagatc gccgcctgat gaccgaaaaa
    29641 gtgttgggaa cgggcgaaaa gccagcgtgg cattttacac cagatgttac cgccggattt
    29701 acgccggaac cttcgccgtt tgaacaaatg agtcaggaag aactgaatgc gcaggcaaaa
    29761 actttgttga gcgcagctgg ttatggtccg caaaaaccgc tgaagctgac gcttttgtat
    29821 aacacttcag aaaaccatca aaaaattgcg attactgtag catcgatgtg gaaaaagaac
    29881 cttggcgtag atgttaaatt gcaaaatcag gaatggaaaa cctatatcga tagccgtaac
    29941 accggcaatt ttgatgttat ccgcgcctca tgggtggggg attataatga accctccact
    30001 ttcctgacat tattaacgtc aacgcattca ggaaatattt cacgctttaa caatccggca
    30061 tacgacaaag ttctggccca ggcatcgacg gaaaataccg ttaaagcgcg taatgccgat
    30121 tacaacgcgg cagaaaaaat cctcatggag caagcaccga ttgcaccaat ttatcaatat
    30181 accaatggac gattaatcaa accgtggctg aaaggttatc ccattaataa ccctgaagat
    30241 gtggcgtaca gtcggactat gtatattgtg aagcattgat gtgatgggaa ctggcgttac
    30301 ccttgtggat aacgccagtg atgtctgatt tagcgaccct gttccggcgg tgtaatgtta
    30361 tccatataca gcgtctggct ggggaaggca aagtccgcgc cgtgtgactg tacaatatcg
    30421 ataatcttca aataaacgtc ttgctgtgca gcaagccact cagcccatac cgtggttttg
    30481 gtaaagcaat aaaccataat attcaatgac gagtcagcaa actggttgaa ataaaccagt
    30541 aaggtttgtc gctggtcgat ggccgggtga tttttcagca tctcacgtac ggcttcgaca
    30601 ataacgccca cttttgccgc atcctcataa cgtaaaccaa tggtcgtggt aatgcggcgg
    30661 ttggtcattc gtcctgggtt ttctacgctg atcgacgaaa acagcgagtt cggtacgtac
    30721 aatggacgat tatcaaaggt cgtaattttg gtaattcgcc agccaatttc cgctactgta
    30781 ccttcgatat ttctgtccgg tgaacggatc cagtcgccaa tactgaaagg acggtcgaaa
    30841 tagagcatga tcccggaaaa gaaattactc agaatatctt taccggccat accgacagcc
    30901 agaccaccaa taccaccaaa ggtcagcaag ccagaaaggc tcatgccgaa atgttcgcca
    30961 taaagcagaa caagcaccac aataatggtg attttgatga tacgcgacat aatccgcgca
    31021 ctggtgatat cgcgaccttt tttaatctgc tgtttttcaa actgattaat cagcaaaaat
    31081 agcttaatcg tcagaataac cgcaatcagg gacgtacaga taaaatcgat aacgcctggg
    31141 gtgataaatt tgagtttata gttttctata acataattaa tgatgctacc aactgcactg
    31201 ataattatgg tgtagattaa aaattgcacc gcatggaata aaaaaccttt tcttttacga
    31261 tttcctcggc gaaaccaaaa gctcatcaga atcaatgctg cgcagctacc gaaaataatg
    31321 accagattaa gcgcattatt tgtaaacagt tcagcgatca ttgttttatc aggctcctcc
    31381 agataattgt cgtcatgcca ggaaacccct ggcggggcta ttttaccgcg acaattcatt
    31441 cagatcatca atagtcaggg aaggaagtag caacattagc taactaatca atgcgttgat
    31501 tgtaaatcca gctaa
//
LOCUS       DAJVTL010000041        31351 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.041, whole genome shotgun sequence.
ACCESSION   DAJVTL010000041 DAJVTL010000000
VERSION     DAJVTL010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 31351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31351
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.041"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..2293
                     /locus_tag="OQQ26_001772"
     CDS             <1..2293
                     /locus_tag="OQQ26_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCS1857244.1"
                     /translation="YQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVD
                     EIPALAEKDDDSVINSLEQIIPGTVAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWD
                     DGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQASSW
                     NTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTV
                     RGIANSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFI
                     QPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLG
                     SEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNI
                     AVSYYRYINDGYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWG
                     NNDKNRNISVGVSGQQWGIGYSLNYQYSRYTDENNDRALSLNLSIPLERWLPRSRVSY
                     QMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAG
                     YSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDP
                     FGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVL
                     VTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQC
                     QFAFSTPDSEPTTSVLQGTAQCH"
     gene            2304..3395
                     /locus_tag="OQQ26_001773"
     CDS             2304..3395
                     /locus_tag="OQQ26_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1857245.1"
                     /translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT
                     VNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLND
                     SLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQTGVCQGDTSRYGPVNI
                     GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTA
                     PQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMR
                     IDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVAPSGHGTVN
                     MRAWPVNLVGGELETGKFQGTATITVMVR"
     gene            complement(3438..4298)
                     /gene="rsmI"
                     /locus_tag="OQQ26_001774"
     CDS             complement(3438..4298)
                     /gene="rsmI"
                     /locus_tag="OQQ26_001774"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HCS1857246.1"
                     /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNA
                     LYKYALEQQG"
     gene            4363..6399
                     /gene="lpoA"
                     /locus_tag="OQQ26_001775"
     CDS             4363..6399
                     /gene="lpoA"
                     /locus_tag="OQQ26_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoA"
                     /protein_id="HCS1857247.1"
                     /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGPHTPDQSTAYMQGTAQ
                     ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKT
                     LLAAEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGHPSIDLLRALIA
                     QEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
                     DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI
                     QQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQ
                     PVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNV
                     EELLKSTPPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIP
                     RSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGTPITPRATT
                     DSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATL
                     YASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMG
                     VDAWSLANHFSQMRQVQVFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPVS"
     gene            6357..6752
                     /locus_tag="OQQ26_001776"
     CDS             6357..6752
                     /locus_tag="OQQ26_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HCS1857248.1"
                     /translation="MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVN
                     ERGGEIDLIMREGRTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
                     FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
     gene            6772..7362
                     /gene="diaA"
                     /locus_tag="OQQ26_001777"
     CDS             6772..7362
                     /gene="diaA"
                     /locus_tag="OQQ26_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HCS1857249.1"
                     /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
     gene            7372..7947
                     /gene="yraP"
                     /locus_tag="OQQ26_001778"
     CDS             7372..7947
                     /gene="yraP"
                     /locus_tag="OQQ26_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HCS1857250.1"
                     /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
                     GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
                     LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
     gene            complement(8061..9101)
                     /locus_tag="OQQ26_001779"
     CDS             complement(8061..9101)
                     /locus_tag="OQQ26_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HCS1857251.1"
                     /translation="MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTA
                     AETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLR
                     TLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPAT
                     LVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFS
                     RWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCFFVI
                     PTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAV
                     SGVIVGGLALLF"
     gene            complement(9174..9809)
                     /locus_tag="OQQ26_001780"
     CDS             complement(9174..9809)
                     /locus_tag="OQQ26_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HCS1857252.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV
                     FNPHDPQLSDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE
                     TLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPEHEGVTILSSSELRKRAE"
     gene            9937..10455
                     /gene="yhbO"
                     /locus_tag="OQQ26_001781"
     CDS             9937..10455
                     /gene="yhbO"
                     /locus_tag="OQQ26_001781"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HCS1857253.1"
                     /translation="MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK
                     GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(10435..10878)
                     /locus_tag="OQQ26_001782"
     CDS             complement(10435..10878)
                     /locus_tag="OQQ26_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HCS1857254.1"
                     /translation="METLITISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
                     ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARQAYN
                     RRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
     gene            10929..11231
                     /gene="yhbQ"
                     /locus_tag="OQQ26_001783"
     CDS             10929..11231
                     /gene="yhbQ"
                     /locus_tag="OQQ26_001783"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708956.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage response exodeoxyribonuclease YhbQ"
                     /protein_id="HCS1857255.1"
                     /translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
                     ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD"
     gene            complement(11218..11721)
                     /locus_tag="OQQ26_001784"
     CDS             complement(11218..11721)
                     /locus_tag="OQQ26_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1857256.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY
                     HEHFNRF"
     gene            complement(11715..12239)
                     /locus_tag="OQQ26_001785"
     CDS             complement(11715..12239)
                     /locus_tag="OQQ26_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HCS1857257.1"
                     /translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
                     TAPETKQTSVGEPC"
     gene            12448..13443
                     /locus_tag="OQQ26_001786"
     CDS             12448..13443
                     /locus_tag="OQQ26_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCS1857258.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
                     RYQNGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKADPQNFIPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
     gene            13452..14330
                     /locus_tag="OQQ26_001787"
     CDS             13452..14330
                     /locus_tag="OQQ26_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417628.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HCS1857259.1"
                     /translation="MKYSLGPVLWYWPKETLEEFYQQAAASSADVIYLGEAVCSKRRA
                     TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
                     CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
                     QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
                     GIQTMSGYVYNLGNELTSMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANS
                     DCNGYWRRLAGLELQA"
     gene            14536..15543
                     /locus_tag="OQQ26_001788"
     CDS             14536..15543
                     /locus_tag="OQQ26_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HCS1857260.1"
                     /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
                     YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQLWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
                     G"
     gene            complement(15661..16905)
                     /gene="mtr"
                     /locus_tag="OQQ26_001789"
     CDS             complement(15661..16905)
                     /gene="mtr"
                     /locus_tag="OQQ26_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HCS1857261.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALTFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK
                     VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAVGRLKTALLTFAPPV
                     VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMITLIL
                     VFGVGNALVHILSSFNLLPVYQ"
     gene            complement(17059..18870)
                     /gene="deaD"
                     /locus_tag="OQQ26_001790"
     CDS             complement(17059..18870)
                     /gene="deaD"
                     /locus_tag="OQQ26_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DeaD"
                     /protein_id="HCS1857262.1"
                     /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR
                     DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH
                     TGGERRGGGRGFGGERREGRAPRRDDSTGRRRFGGDA"
     gene            complement(18863..18943)
                     /gene="yrbN"
                     /locus_tag="OQQ26_001791"
     CDS             complement(18863..18943)
                     /gene="yrbN"
                     /locus_tag="OQQ26_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HCS1857263.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(19050..19934)
                     /gene="nlpI"
                     /locus_tag="OQQ26_001792"
     CDS             complement(19050..19934)
                     /gene="nlpI"
                     /locus_tag="OQQ26_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HCS1857264.1"
                     /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(20043..22178)
                     /gene="pnp"
                     /locus_tag="OQQ26_001793"
     CDS             complement(20043..22178)
                     /gene="pnp"
                     /locus_tag="OQQ26_001793"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312072.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HCS1857265.1"
                     /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQN
                     INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE
                     TIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIK
                     DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV
                     YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRIRLSIKEATEQSQPAAAPEAPAAEQGE"
     gene            complement(22425..22694)
                     /gene="rpsO"
                     /locus_tag="OQQ26_001794"
     CDS             complement(22425..22694)
                     /gene="rpsO"
                     /locus_tag="OQQ26_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HCS1857266.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
     gene            complement(22843..23787)
                     /gene="truB"
                     /locus_tag="OQQ26_001795"
     CDS             complement(22843..23787)
                     /gene="truB"
                     /locus_tag="OQQ26_001795"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HCS1857267.1"
                     /translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT
                     GALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
                     FSAEQLAVALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLF
                     IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
                     LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
                     LEGLVRITEGENGKFIGMGEIDDEGRVAPRRLVIEYPA"
     gene            complement(23787..24188)
                     /gene="rbfA"
                     /locus_tag="OQQ26_001796"
     CDS             complement(23787..24188)
                     /gene="rbfA"
                     /locus_tag="OQQ26_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HCS1857268.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
                     RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
     gene            complement(24352..27024)
                     /gene="infB"
                     /locus_tag="OQQ26_001797"
     CDS             complement(24352..27024)
                     /gene="infB"
                     /locus_tag="OQQ26_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HCS1857269.1"
                     /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT
                     LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
                     AAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSN
                     QQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDN
                     AEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADRE
                     EARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIK
                     AMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAP
                     VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAA
                     FTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPD
                     RVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMAS
                     GAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSI
                     PVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMT
                     EGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASN
                     AILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLA
                     EVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVR
                     NGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA"
     gene            complement(27049..28536)
                     /gene="nusA"
                     /locus_tag="OQQ26_001798"
     CDS             complement(27049..28536)
                     /gene="nusA"
                     /locus_tag="OQQ26_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HCS1857270.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEA
                     VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
                     EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
                     DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
                     ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL
                     LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAA
                     RGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA"
     gene            complement(28564..29016)
                     /gene="rimP"
                     /locus_tag="OQQ26_001799"
     CDS             complement(28564..29016)
                     /gene="rimP"
                     /locus_tag="OQQ26_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HCS1857271.1"
                     /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV
                     LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
     gene            complement(29223..29299)
                     /locus_tag="OQQ26_001800"
     tRNA            complement(29223..29299)
                     /locus_tag="OQQ26_001800"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(29263..29265),aa:Met,seq:cat)
     gene            29647..30990
                     /gene="argG"
                     /locus_tag="OQQ26_001801"
     CDS             29647..30990
                     /gene="argG"
                     /locus_tag="OQQ26_001801"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HCS1857272.1"
                     /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
                     RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
                     DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGVPQVENLENKVK"
BASE COUNT         7611 a         8499 c         7829 g         7412 t
ORIGIN      
        1 ttatcaggtt gatatctggc tgaataaaaa gaaagtttca cagaaaaaaa ttacatttac
       61 cgccaatgca gagcaacttc tgcagccaca gtttacggta gaacaactac gtgagctggg
      121 tattaaggtg gatgaaatcc cggcactggc tgaaaaagat gacgatagcg tgatcaactc
      181 gcttgaacaa atcattcccg gtacagttgc tgaatttgat ttcaatcatc agcgacttaa
      241 tttgagcatt ccccaaattg cactgtaccg tgatgcaaga ggttacgtct ccccttctcg
      301 ttgggacgat ggtataccaa cgctgtttac caactactcg tttacaggtt ctgataaccg
      361 ttaccgccag ggcaatcgta gccaacgaca gtacctgaat atgcaaaatg gtgctaattt
      421 tggcccctgg cgattacgta actattctac gtggacacgc aacgatcagg cgtcaagctg
      481 gaacactatc agtagttatt tacaacgtga tatcaaggca ttgaagtctc agttgcttct
      541 gggagaaagc gccaccagcg gcagtatttt ttccagctac acctttactg gcgtgcaact
      601 cgcttccgac gataatatgc tgccaaacag ccagcgtgga tttgccccaa cggtacgcgg
      661 tatcgcaaac agtagtgcaa tcgtgactat caggcaaaat ggttatgtga tctatcaaag
      721 caacgtgcca gcgggtgcct ttgaaattaa cgatctctac ccctcttcca acagcggcga
      781 tttagaagtc acgattgaag aaagtgacgg tacgcaacgt cgctttatcc agccttattc
      841 ttcattaccc atgatgcagc gacctgggca tctaaaatat agcgcgaccg ctggacgcta
      901 tcgcgctgat gcaaacagtg atagcaaaga acccgaattt gctgaagcca cggcaatata
      961 tggtttgaat aatactttta cgctgtatgg cggcctgctc ggttctgaag attattatgc
     1021 gctggggatc ggtatcggcg gcacacttgg cgcactgggc gcgttgtcga tggatatcaa
     1081 cagagctgac acccaattcg ataaccagca ctcttttcat ggctatcaat ggcgtacgca
     1141 gtacatcaaa gatatcccgg aaaccaacac caatatcgct gtcagctact atcgctatat
     1201 caacgatggc tattttagtt ttgatgaagc caatacccgc aattgggact ataacagtcg
     1261 ccaaaaaagt gaaattcaat tcaacatcag ccagacaata tttgatgggg taagtctgta
     1321 tgcctcaggt tcgcagcaag actattgggg caataacgat aaaaacagga atatctctgt
     1381 tggggtttcc ggccagcaat ggggaattgg ttacagcctg aattatcaat acagccgcta
     1441 cactgatgaa aataatgacc gtgcactctc tttgaatctc agtattccgt tagaacgctg
     1501 gttaccgcgt agccgggttt cctatcagat gaccagccag aaagatcgcc caacccaaca
     1561 tgaaatgcgt cttgatggct cactgctgga tgatggtcgc ctgagctata gcctggaaca
     1621 aagtctggat gacgataaca accataacag tagcctgaac gccagttacc gttcacctta
     1681 tggaaccttc agtgccggat acagttacgg taatgacagc agccaataca attacggcgt
     1741 taccggcggc gtggttatcc atcctcatgg cgtgacgctc tcgcaatatc tgggcaacgc
     1801 ttttgcgctt atcgatgcta acggggcttc tggcgtgagg atacaaaact atccggggat
     1861 tgctactgat ccctttggct atgcagtggt tccttatctc acgacttatc aggaaaaccg
     1921 tctctcggta gatactacgc agctgcccga taacgtcgat cttgaacaaa caacacagtt
     1981 tgtggtgccc aacagaggtg caatggtagc ggcgcgtttc aacgccaata tcggttatcg
     2041 cgtacttgtt acagtcagcg atcgcaacgg taaaccgttg ccctttggcg ctcttgccag
     2101 caacgatgat acggggcaac aaagtatcgt cgatgagggc ggcatactat atctctctgg
     2161 gatatcgagt aaatcacaaa gctggactgt acgctgggga aatcaggcag atcaacaatg
     2221 tcagtttgct tttagtacac cggattcaga accaacaacc tctgtattac aaggcacagc
     2281 gcagtgccat taaggataaa aaaatgaaaa gagcgcctct tataacagga cttttgttga
     2341 tatccacatc ctgcgcttat gcctcctcag gagggtgtgg agccgacagc actagcggtg
     2401 cgacaaatta cagcagtgtg gttgatgatg ttacggtgaa ccagacagat aacgtgacag
     2461 gacgggagtt tacctctgca acgctaagta gcactaactg gcaatacgcc tgttcctgct
     2521 ctgcgggtaa ggcagttaaa cttgtctata tggtcagccc cgtacttacc accactggac
     2581 atcagacagg atattacaaa ctcaatgaca gcctggatat taaaaccaca ttacaggcaa
     2641 acgacattcc aggactcaca accgaccagg ttgtctctgt taacacccga ttcacacaga
     2701 taaaaagcag caccgtatat tctgctgcaa cccaaacggg tgtttgccag ggtgacacgt
     2761 ctcgttatgg acccgttaat attggtgcaa ataccacctt taccctgtat gtcaccaagc
     2821 catttctcgg ctcgatgacc attccgaaaa cggatattgc cgtcattaaa ggcgcgtggg
     2881 tcgatggaat gggaagcccg tctacaggtg acttccatga tttagtcaag ttatcgattc
     2941 agggaaatct caccgcccca cagtcgtgca aaattaatca gggcgatgtt attaaggtta
     3001 attttggatt catcaatggt cagaagttta ccacccgcaa tgccatgcca gacggtttta
     3061 ctccagtaga ctttgatatc acttatgact gtggtgatac ttcaaagatt aaaaactcgt
     3121 tgcaaatgcg catcgacggt acaactgggg tagtagacca gtacaacctg gtcgccaggc
     3181 gaagaagttc agacaatgtg cccgatgtcg gtattcgtat tgaaaatctc ggcggcggag
     3241 ttgcaaatat tccttttcag aacggtatcc ttcccgttgc tccttccggg catggcaccg
     3301 tcaatatgcg cgcctggcca gttaatctgg tcggtggtga gctggaaaca ggaaaatttc
     3361 agggcacagc caccattacc gtcatggtgc ggtaaaagaa gacgttgcgt tttgattaac
     3421 gcaactcttc ggcactgtta cccctgctgc tccagcgcat acttatacag cgcatttttc
     3481 ttcacgccat gaatttctgc ggccagcgcc gccgcttttt tcagcggcag ttctgcctgt
     3541 agcagcgcca gcgtgcgcag ggcatcggcg ggtaagtctt cttcctgtgc tttatgacct
     3601 tcgacaatca gcaccatttc gcctttgcga cggttttcat cttcctttac ccacgccagc
     3661 agctcgccaa cgggcgcacc gtgaatggtt tcccaggttt tggtcagctc acgcgccaga
     3721 accacgtagc gggattcgcc taataccgca acgatatctt ccaggctatc taacagacgg
     3781 tgggtagatt cataaaaaat cagcgtgcgc ggctccgctt caatggcttt tagcgcatca
     3841 cggcggcctt ttgatttggc aggtaaaaag ccttcgtaac agaaacggtc agatggtaaa
     3901 cccgcggcgc ttaacgcagt gatagcagca cacggtccgg gtagcggcac cacacgaatc
     3961 cccgcttcac ggcaggtacg caccagatgg tagccaggat cgttaattag cggcgttccg
     4021 gcatcggaaa ccagcgcaat gttttgcccc tcttgcagct tcgccagcag cgtttcggct
     4081 ttttgttgtt cgttatggtc gtgcagcgca aacaaccggg cattaatccc aaaatgttgc
     4141 agcaataaac cggtgtgacg agtatcctcg gcggcaatca gatcaacggc ctgtaatacc
     4201 tctaacgcac gctgggtgat atccgccaga ttgccgattg gcgtcggtac aatgtaaagc
     4261 tggccctgag aattatccgc cgattggtgt tgtttcattg tgtcgtccgt attgccgatt
     4321 taatattgag cattgcgtaa aaaaaatatc actggataca ttatggtacc ctcaacattt
     4381 tctcgtttga aagccgcgcg ttgtctgcct gttgttctgg cagccctgat tttcgccggt
     4441 tgtggccccc atactcccga tcagtccact gcttatatgc agggcacggc gcaggctgat
     4501 tctgcctttt atcttcagca gatgcagcaa agctctgatg ataccaggat caactggcaa
     4561 ttactcgcca ttcgtgcact ggtgaaagaa ggtaaaaccg ggcaggcggt tgagttgttt
     4621 aaccaactac cgcaagaact gaacgattct cagcgtcgcg agaaaacact gctggcggca
     4681 gagattaaac tggcgcagaa agattttgct ggcgcgcaaa acttgctggc gaaaatcaca
     4741 cctgccgatt tagaacaaaa ccagcaagcg cgttactggc aggcaaaaat cgatgccagc
     4801 caggggcatc cttccattga tttactgcgc gcgttaattg ctcaggaacc gctgcttggc
     4861 gcgaaagaaa aacagcagaa tattgatgcc acctggcagg cgctctcctc catgactcag
     4921 gaacaagcga atacgctggt gatcaacgcc gacgaaaata ttctgcaagg ctggctggat
     4981 ctgcagcgcg tctggtttga taaccgtaac gatcccgaca tgatgaaagc cgggatcgcc
     5041 gactggcaga aacgttatcc gaacaatccg ggcgcgaaaa tgctgccaac gcagttggtt
     5101 aacgtaaaag cgtttaaacc agcctcgacc aacaaaatcg ccctgctgtt gccgctgaat
     5161 ggccaggcag cggtatttgg tcgcactatt cagcaaggct ttgaagcggc gaaaaatatc
     5221 ggcactcagc cagtggcggc tcaggtagct gccgcacctg ccgcagacgt agcagaacaa
     5281 cctcagccgc aaactgcgga tggcgttgcc agcccggcac aagcctcggt tagcgatctg
     5341 accggtgatc agcctgcggc ccagccggtg cctgtaagcg ccccggcgac aagcaccgca
     5401 gcggtaagcg cacccgcaaa tccatccgca gagctgaaaa tctacgatac ctcatcacaa
     5461 ccacttagcc agatcttaag ccaggttcag caggatggcg cgagtattgt ggttggtccg
     5521 ttgctgaaaa ataacgttga agagttgctg aagagcaccc ccccgctgaa cgtactggca
     5581 ctgaaccagc cggagaatat cgaaaaccgc gtcaatattt gttacttcgc gctttcaccg
     5641 gaagacgaag cgcgcgatgc agcgcgtcat attcgtgacc agggtaaaca agcgccgctg
     5701 gtgctgatcc cacgcagttc attgggcgat cgcgtagcca atgcgtttgc gcaagagtgg
     5761 cagaaactgg gcggcggcac cgttctgcaa caaaaatttg gttccaccag cgaattacgc
     5821 gcgggtgtta acggcggctc tggtatcgct ttaacgggta caccgattac tcccagagcg
     5881 acaaccgact ccggcatgac gaccaacaat ccaacgctgc aaaccacgcc aaccgatgac
     5941 cagttcacca ataatggcgg tcgtgtcgat gcggtgtaca ttgtggcaac gccgggtgaa
     6001 atcgctttta tcaaaccgat gatcgccatg cgtaacggta gccagagcgg tgcaacgctg
     6061 tacgccagct cccgcagtgc gcaagggacc gctggcccgg atttccgact ggagatggaa
     6121 ggcttgcagt acagcgaaat cccgatgctg gcgggcggta atctgccgtt aatgcagcag
     6181 gcgctcagcg cggtgaacaa cgattattcg ctggctcgca tgtatgcgat gggcgttgat
     6241 gcctggtcgc tggcaaatca tttctcacaa atgcgccagg ttcaggtttt tgaaatcaac
     6301 ggtaataccg gaagcctgac ggcaaacccg gattgcgtga ttaacaggaa gttatcatgg
     6361 ctacagtacc aacaaggtca ggtagtcccc gtcagttaac caccaaacag accggcgatg
     6421 cgtgggaagc acaagcgcgt cgctggctgg aaggcaaagg actgcggttt atcgccgcta
     6481 acgtgaacga gcgtggcggc gagatcgatc tgataatgcg tgaaggccgg accaccgttt
     6541 ttgtcgaggt acgctatcgc cgctctgcgc tttatggcgg cgcggcagcc agtgtgaccc
     6601 gcagcaaaca acacaaatta ttacagactg cccgcttgtg gctcgcgcgt cataatggga
     6661 gttttgatac tgtggattgc cggttcgatg tggtagcctt caccgggaat gaggttgagt
     6721 ggattaagga tgccttcaat gaccactcat aattaaggtt taaggattag cgtgcaagaa
     6781 agaattaaag cttgcttcac tgaaagcatt caaactcaaa ttgcggcggc agaggcgctt
     6841 ccggatgcca tctcccgtgc agccatgacg ctggttcagt ctctgctcaa tggcaacaaa
     6901 atcctctgtt gtggtaatgg aacttccgct gccaatgcac agcattttgc tgccagcatg
     6961 atcaaccgtt tcgaaacgga gcggcccagc ttacctgcca ttgcactaaa tactgataat
     7021 gttgtcttaa cggcgattgc caacgatcgt ttacatgatg aagtgtatgc aaaacaggtg
     7081 cgggcgctgg gtcatgcggg agatgtattg ttagccattt ccacccgtgg caacagccgc
     7141 gatattgtta aagcagttga agccgccgtt acgcgtgata tgaccattgt ggcattgacc
     7201 ggctatgacg gcggcgaact tgcaggtttg ttagggccac aggatgtgga gatccgcatt
     7261 ccttcgcatc gtagtgctcg cattcaggaa atgcatatgc tgacggtaaa ttgcctgtgc
     7321 gatctgatcg ataacacgct tttccctcac caggatgatt aaggagaata catgaaggca
     7381 ttatcgccaa tcgcagtcct tatttccgcg ctgctgttgc aaggttgtgt tgccgctgcc
     7441 gtagtgggta ccgctgctgt gggtaccaaa gccgcaactg acccacgcag tgtcggcacc
     7501 caggtggacg atggtaccct ggaagtgcgc gtgaacagcg cattgtcgaa agacgaacag
     7561 attaagaaag aagcgcgcat taatgtaacg gcctatcagg gcaaagtgct gctggttggg
     7621 cagtcaccaa atgctgaact ttcggctcgc gccaaacaga ttgctatggg cgtagacggt
     7681 gccaacgaag tgtataacga gattcgtcag ggccagccga ttggtctggg cgaagcgtct
     7741 aacgatacgt ggatcaccac caaagtgcgt tcgcagctct taaccagcga cctggtgaaa
     7801 tcgtccaacg tgaaagtgac caccgaaaac ggtgaagtgt tcctgatggg gctggtgact
     7861 gaacgtgaag cgaaagcggc ggcagatatt gccagccggg tgagcggcgt gaagcgggta
     7921 actacggcgt ttacgtttat taaatagcag ccccttgtaa tgcctgatgc gacgcttgcc
     7981 gcgtcttatc aggcctacaa cgatgcaaac cgtaggtcgg ataaggcgtt tacgccgcat
     8041 ccgacatgtt ttccctcaaa tcagaataac agcgccagcc cgccgacaat cacgcctgac
     8101 actgccacca tcgcccccgt cagccataag gctttcgccg ggaacgcttt gcgcagcata
     8161 atcagtgacg gcaaactcac cgccgggagc gtcatcaaca atgccagcgc cggagcagtt
     8221 cccatacctg ccagcatcat cgtttgtaca atcggaattt ctgctgccgt gggaatgaca
     8281 aaaaagcatc ctgctaccgc catcgccacc acccacatca ggctgttatc gacagcacca
     8341 tcggcatggg ggaataacca gacgcgagcg gcacccaaca ccagtactgc aaggatgtaa
     8401 accgggatcg tactccagaa aagcgtccat agcgccctgc cccagcggct aaaaaaaccg
     8461 ccctgtgctt ccggtatgtc aatttcgacc ggtgcctgcg tttgcggtgt ttcacgcacc
     8521 catttttgca ccagcgtcgc aatcagcaac accatcacca gcccggccac cagacgaatc
     8581 gccgcaaaac cccagccgag gacaaacccc ataaacacca gcgtcgccgg gtttaacacc
     8641 ggattgccca tccagaatgc cagcgcaccg cccatcgata cctgttggcg acgcattccc
     8701 gccgcgaccg gagccgcaca gcaggtacac atcatgcccg gcagcgaaaa cagcgttccc
     8761 agcagcgtgc cgcgaaagcg cgattgccca agcgtacgca acaaccagtc acgcgggatc
     8821 agcacctgaa tcaacgaacc gaggatcacc cccagcaccg ccgctttcca tactgcgagg
     8881 aaatagatca tcgcgtaatc caacgccgct tgccacggat tagcatccgc ctgcgcaagg
     8941 atagatttac cgatactgtg ggtttcggct gcagtaaacg ctttgccgta gtaaggttgc
     9001 catttcacat accagagacc ggcaatgaca acgagaaaga aaagcgcggg tttccaccac
     9061 tgaatgggcg ttgccgcctg agatgaagac tgaccagtca tagcattccc caggaataag
     9121 ttatgataat tgagcgcgtg aatattacgc tcactatcaa ttcttgggaa taattattca
     9181 gctcttttgc gtaattctga agagcttaaa atcgtcacgc cttcatgctc aggccgcatc
     9241 gcctctgcca gcatgacccg cgccacgtct ctcgcatcaa tggatttcca gttacctggt
     9301 aacaaacgga acagcggcgc aaaaagcgtt tcgttcatcc gctgtttgct acgatcgccc
     9361 agtaacatcg acgggcgagc aatggtcaat ttcggccagt tctgggcaat taatgcttct
     9421 tccatctccc ctttgacgcg gttatagaaa aacggcgagt gggcattggc ccccatagca
     9481 ctgaccacca gcatatgctg cgcgcccagc cgccgcccgg ttaatgcggt atccactacc
     9541 agcgtgtaat cggcatgaat aaacgcctct ttgctccccg cttctcgccg cgtggtgccg
     9601 agacaacaaa acacaatgtc gatgggatcg gtgacctgcg ccaacgcgtc actcagttgc
     9661 ggatcatggg gattaaacac cccgggcata tcgcccaacg gacgtcgcgt cggcgcggct
     9721 atggcgttaa ctttcggttc gttaatcaac atccgcagca ggtgaccgcc caccagcccc
     9781 gttgcgcctg taatcagtac ctgactcatc ttcgctcctt tacagaattg tctgccttgc
     9841 gctccacggc tcatgcacca ggcttaatag accatgaggt aattatcccc gattgtgtga
     9901 aattcgcctc atccaatgca acaacgcgga ggaagcatga gtaagaaaat tgccgtttta
     9961 atcactgatg aatttgaaga ttcagaattt acttcacccg cagacgagtt ccgtaaagcc
    10021 ggacacgaag tgattaccat tgaaaaacaa gcgggtaaaa cggtgaaagg caaaaaagga
    10081 gaagccagcg tgaccatcga taaatccatc gatgaagtga cgccagcgga gtttgatgcc
    10141 ctgctgctac cgggcggcca ttcaccggat tatctgcgtg gggacaaccg ttttgtcacc
    10201 tttacccgcg attttgtgaa tagcggcaaa cctgttttcg ccatctgtca cggcccgcag
    10261 ttgctgatca gtgccgatgt gattcggggg cgcaaactga ctgcagttaa accgatcatt
    10321 attgatgtta aaaacgcggg cgcggaattt tacgatcagg aagtcgtagt cgataaagat
    10381 cagctggtta ccagccggac accggacgat ctgccagcgt ttaaccgtga ggcgttacgc
    10441 ctgctcggtg cctgagtcgc gtagccaaat cattttttta ccaaagccca gcgtgttgtc
    10501 ggtgaatttg atttcatcga gccggatttc ccacaccggg gccgacagca ttctggcaac
    10561 cggaaagcga cgattgtacg cctggcgcgc gaggtcgctt tcctcacctt ccagcctgcg
    10621 gatctcacct ttaaactgca cgccgcgaat taacgctacc gttttcggct gaccgtttac
    10681 cgttccggca accgcagcct gcggcccact catctgcgcg tggcgcgttt tttcttccgt
    10741 caaaatgtag aaggcgactt tctgcgcatc aaacagataa aaagcattag cgcaccacag
    10801 ttccccttcc tgctgcacac accaagtgac aacatgttgt tttgccaacc aacggctgat
    10861 ggtgatgagt gtttccattg ctgttctctt ttatactgtg ggcctgacct taacatgcga
    10921 cgtagacgat gacaccctgg tttctttact tgatccgtac cgccgacaat aagctttata
    10981 ccgggatcac cacggatgtc gaacgccgct atcagcagca ccaaagcggc aaaggggcga
    11041 aagcactgcg cgggaaagga gaactgacgc tggcgttttc tgcgccagtg ggcgatcgtt
    11101 cgctggcgtt acgggcggaa tatcgcgtta agcaactgac caaacggcaa aaagagcgtc
    11161 tggtagcgga aggcgcaggg tttgcagagc tgttaagcag tctgcaaacc ccggagatta
    11221 aaagcgattg aaatgctcgt gatactcaac cagaccagtt acgccattca acgcgtcatc
    11281 cgctagacga tgtacctgga aggcgctttc agtgcccggc cagcggcaac gcagatcgtg
    11341 atgcgcagcc agttcaaagc cgaaacgact gtacagcgcc ggatcgccca gcgtcaccac
    11401 tgcggcatag ccgaactcat tgagcgaatc gagtccttca tagaccagtt ggcgtgccag
    11461 cccctgtcca cggtattttt catcaaccgc caacggtgcc atgccgaccc attgcaggtc
    11521 ttcgccctgc acatcaaccg gactaaatgc cacatagcca atgacctgac cttcgtcatc
    11581 tgtcgccacc agccccagcg tcagaaagcc atcttcacgc agatcgtgaa ccagcttcgc
    11641 ttccgcatca ctttcgaatg agcgacgcag cagggcatca atacccggcg catcaatggg
    11701 aatttctact cgaattagca tggttcacct accgatgtct gtttggtttc aggcgcggtt
    11761 ttcattcccg cctcaacaaa atccgccagt tgcagcagca tcatgcgtaa ggctttcggc
    11821 atttgctcca gttcaatggc gtccatcagg tttttcacat acagccccag ctccgtatcg
    11881 ccttcaatca ccagccgacg ctggaagaag agcgtatccg gatcttgttt acgcgccgca
    11941 atcatcagca gatcgctggc gtcggcacta aaactcacat cagcttgcgc gttctggctg
    12001 accaccagtt tgccattcac caccgaggta aaccattgca ggtcaatatc acgcacatga
    12061 atacttaacc agcggccttc aagaaactct agctcgccat catccagcgc ctgacggaat
    12121 tgccagctta agacctgctc aagaacctgg cgttttagcg caaatggcgt cagttttacc
    12181 ggtacactca acagagatgg tcccaaatgc acaatacggg aacgcagttt atccaacacg
    12241 agttttactc cctgtttcaa caatcatcct attttgccat atcagaaaaa taacatagcg
    12301 gtataaatca acaattccat atgaaattgc tgctaccacc aatacaactt taactgcctt
    12361 aaatcaaaaa ttgtcgcagc aaggttaact aaaatcccag ttcgttaaca tttttgcgtt
    12421 ttgatagcgc aaccttcagg aaaaattatg gagctgctct gccctgccgg aaatctcccg
    12481 gcgcttaagg cggccatcga aaacggcgca gatgctgttt atatcgggct aaaagatgat
    12541 accaatgccc gtcacttcgc cggccttaac tttaccgaga aaaaattgca ggaagcggtg
    12601 agttttgtcc atcaacatcg ccgcaaactt cacatcgcga ttaacacttt tgcgcatccg
    12661 gacggttacg cccgttggca gcgtgccgtg gatatggcgg cgcagctggg tgccgacgcg
    12721 ctgatcctcg ccgacctcgc catgctggaa tacgccgccg agcgttatcc gcatattgag
    12781 cgccacgtat cagtgcaggc ttcggcgacc aatgaagagg cgattaactt ttatcatcgc
    12841 cattttgacg ttgcccgcgt ggtgctgccg cgcgtgttgt cgattcatca ggtgaaacaa
    12901 ctggcacggg ttactcctgt cccgctggaa gtgtttgctt tcggcagcct gtgcattatg
    12961 tcggaaggcc gttgctatct gtcgtcgtat ctgacgggtg agtcgcccaa cactgtgggc
    13021 gcgtgttctc cggcccgttt cgtgcgctgg caacaaacgc cgcaggggct ggaatcccgc
    13081 ctgaacgaag tgctgatcga ccgttatcag aacggcgaaa acgcaggtta tccgacgctg
    13141 tgtaaagggc gttatctggt ggacggcgag cgctatcacg cgctggaaga accaaccagt
    13201 ctcaataccc tggaactgct gccggagtta atggcggcga atattgcttc ggtgaaaatt
    13261 gaaggccgcc agcgtagccc ggcgtatgtc agccaggtgg cgaaagtctg gcgtcaggct
    13321 atcgaccgtt gtaaggccga tccgcaaaac ttcataccgc aaagcgcgtg gatggagacg
    13381 ctcgggtcga tgtccgaagg cacgcagacc actcttggcg cgtatcaccg taaatggcag
    13441 tgagaagagc aatgaaatat tccttagggc cagtgctgtg gtactggcca aaagagacgc
    13501 tggaagaatt ttatcagcag gccgccgcca gcagcgccga cgtgatttat cttggtgaag
    13561 cggtatgcag caagcgccgg gcaaccaaag ttggcgactg gctggagatg gcaaaatcac
    13621 tcgccggaag tggtaagcag attgtgctct ccacgctggc gctggtgcag gcatcctctg
    13681 aactgggcga actgaaacgc tatgttgaga acggtgagtt tctgattgaa gccagcgatc
    13741 tcggcgtggt gaatatgtgc gctgaacgca aactgccgtt cgtcgccggg cacgcgctga
    13801 actgctacaa cgcggtgacg ctgaaaatat tgctcaaaca gggcatgatg cgctggtgta
    13861 tgccggtgga gctttcccgc gactggctgg tgaatctgct taatcagtgc gatgagttgg
    13921 ggattcgcaa ccagtttgaa gtggaagtcc tgagctacgg tcatctaccg ctggcctact
    13981 ccgcccgctg ctttaccgcg cgttcggaag accgcccgaa agatgagtgt gaaacctgct
    14041 gcattaagta tccgaacggg cgcaacgtgc tgtcgcagga aaaccaacaa gtgtttgtac
    14101 tcaatggcat tcagaccatg agcggctacg tttacaacct cggtaacgag ctgacatcca
    14161 tgcagggatt ggttgatgtg gtccgcctgt caccgcaggg tactgacact ttcgcgatgc
    14221 tcgacgcctt ccgcgctaat gaaaatggcg ctgcgccact gccgttgacg gcaaacagcg
    14281 actgtaacgg ctactggcgg cggctggctg ggctggagct gcaagcctaa gtaaatatgc
    14341 tcgtcatact tcaagttgca tgtgctgcat ctgcattcgt tcaccccagt cacttactta
    14401 tgtaagctcc tggggattca ctctcttgtc gccttcctgc aactcgaatt atttagagca
    14461 cagctcactt tgttaacaac tttaactact ctttaatgca gtattaaaga ttaatcggta
    14521 acaaagtgag ctgttatgac tgataaaacc attgcgtttt cgctactcga tctggccccc
    14581 attcccgaag gttcttcagc gcgggaagcg ttctcccact ctctcgatct cgcccgtctg
    14641 gctgaaaagc gcggctatca tcgctactgg ctggcagaac accacaatat gaccggcatt
    14701 gccagtgctg caacatcggt attgattggc tatctggcgg cgaataccac cacgctgcat
    14761 ctggggtctg gcggcgtaat gttgcctaac cactcaccgt tggtcattgc cgaacagttc
    14821 ggcacgctca atacgctcta tccggggcga atcgatttgg ggctgggtcg tgctccgggt
    14881 agtgaccaac ggacaatgat ggcgctgcgt cgtcatatga gcggcgatat tgataatttc
    14941 ccccgcgatg tcgcggagct ggtggactgg tttgacgccc gcgatcccaa tccgcatgtg
    15001 cgcccggtac caggctatgg cgagaaaatc cccgtgtggt tgttaggctc cagcctttac
    15061 agcgcgcaac tggcggcgca gcttggtctg ccgtttgcgt ttgcctcaca cttcgcgcca
    15121 gatatgctgt tccaggcgct acatctttat cgcagcaact tcaaaccgtc ggctcggctg
    15181 gaaaaaccat acgcgatggt gtgcatcaat attatcgccg ccgacagcaa ccgcgacgct
    15241 gaatttctgt ttacctcaat gcagcaagcc tttgtgaagc tgcgccgtgg cgaaaccgga
    15301 caactgccgc cgccgattca aaatatggat cagctctggt caccgtctga gcagtatggc
    15361 gtgcagcagg cgctgagtat gtcgttggtg ggtgataaag cgaaagtgcg tcacggcttg
    15421 cagtcgatcc tgcgcgaaac cgacgccgat gaaattatgg ttaacgggca gattttcgac
    15481 caccaggcgc gcctgcattc gtttgaactg gcgatggatg tgaaggaaga gttgttggga
    15541 tagtgtgtct taacgcggga agccttatcc gagctggcaa cgctgtccta cgtagacctg
    15601 ataagcgaag cgcatcaggc attgtgtagg cagcagaaat gtcggataag gcaccgctga
    15661 ttactgatac accggcagca aattaaagct cgataagata tggaccagtg cgttgccaac
    15721 gccaaacacc agaatcagcg taatcatcgg cttgccgccc cagacacgga atttcgggct
    15781 gccaaagcgt ttacgcgatg cgcgggccaa cagcgccgga acaattgccg cccagatggt
    15841 agccgctaag ccagcataac caatggcgta caggaatccg ttcgggaaca gcagaccacc
    15901 cacaacaggc ggtgcaaagg tcagcaatgc cgttttcaaa cggcccacag ccgagtcgtc
    15961 gaaaccaaac agatctgcca gatagtcaaa caaacccagc gttacgccga ggaacgaact
    16021 cgctaccgca aagtttgaga acacgaccag cagcagatcc agactacggc tgttcagcac
    16081 gccacttaat gcctgtacca gcacatcaat gttaccgccc ttctcggcga tgccgataaa
    16141 ctccggacgc gggatgttgc ccatcgtcgc cagcaaccag atggtataca gcgccagtgc
    16201 catcaacgta ccgtacacca ggcatttcac gatggttttc ggatctttgc cgtaatactt
    16261 catcaggctc ggcacgttac cgtgataacc aaacgatgcc agacagaacg gcagggtcat
    16321 cagcaaatac ggcgcataag atgcattgct ttcggcgacg ttgaacaatg tcgcaggctg
    16381 cacatgcccc agtaggctac cgaaggtgag gaagaaggta atgactttcg cccccagtac
    16441 aatcgccgtc atgcggctga cggctttagt gctcaaccac accacaaacg ccaccagcag
    16501 tgcaaaacca aaacccgctg cccgtgccgg gacgttcaat gacatctctg cgaaggtatg
    16561 atgcagaatc gaaccgctgg cagaaatata ggcataggtc aggatataga gcacaaaggc
    16621 aatggaaatg ccattgacca cgttccagcc tttgcccagc aaatctttgg tgatggtgtc
    16681 aaaactcgaa ccgattcggt aattcaggtt agcttccaga atcatcaagc cggaatgcag
    16741 catacagaac caggtaaagg tcagcgccgc cattgaccag aaaaaccacg ccccggacat
    16801 gaccactggc agagaaaaca tccctgcgcc aataatggtg ccgccgataa tcaccacgcc
    16861 gccaagcagc gacggtgacg tttgggtggt ggttagtgtt gccatgaggg cttctctcca
    16921 gtgaaaaata gtgcgactgc gttgttatgc attgcactgt accagtacac gagtacaaaa
    16981 gacagaaaaa aagccccgat ggttaaaatc ggggctgtat atattatttt acagactgtg
    17041 ttcgctgttc agcgatgatt acgcatcgcc accgaaacga cgacgaccgg tagagtcatc
    17101 acgacgcggt gcgcggcctt cacgacgttc gccaccgaaa ccacgaccac cgccacgacg
    17161 ctcaccgcca gtatgcggct gtgcatcgcc cagtaactgc atgttcatcg gcttgttgag
    17221 aatgcgagtg cgcgtaaagt gttgcagcac ttcacccggc atacctttcg gcagttcgat
    17281 ggtggagtga gaagcaaaca gcttgatgtt accaatgtaa cggctgctga tgtcgccttc
    17341 gttagcaatc gcaccaacga tatgacgaac ttcaacacca tcatcgcggc ccacttcaat
    17401 gcggtacagc tgcatatcgc caacatcacg acgttcacga cgcggacgat cttcacggtc
    17461 accacgcggg ccacggtcgt tacgatcgcg cggaccacgg tcatcacggt cacggaattc
    17521 acgtttcgga cgcatcggcg catctggcgg tacgatcaga gtacgttcac cctgtgccat
    17581 tttcagcagt gcggcggcca gagtttcgag atccagctct tcaccttctg cagtcggctg
    17641 aattttgctc agcagtgcgc ggtattgatc cagatcgctg ctttccaact gctgctgtac
    17701 tttagcggcg aatttttcca aacggcgttt gcccagcagt tctgcgttcg gcagttctac
    17761 ttccggaata gtcagcttca tagtacgttc aatgttgcgc agcagacgac gctcgcggtt
    17821 ctcaacgaac agcagcgcgc ggccagcacg acccgcacga ccggtacgac cgatacggtg
    17881 aacgtaagac tcagaatcca tcgggatatc gtagttaacc accaggctga tacgctcaac
    17941 gtccaggcca cgggccgcaa cgtcggtcgc aatcaggatg tccagacgac catctttcag
    18001 gcgttccagt gtctgttcac gcagcgcctg gttcatgtca ccattcagcg cggcgctgtt
    18061 gtagccgtta cgctcaagag cttcagccac ttccagagtc gcatttttgg tacgaacgaa
    18121 gataatcgcc gcatcaaaat cttccgcttc caggaaacgt accagtgctt cgtttttacg
    18181 cataccccag acagtccagt agctctggct gatatcagga cgggtagtca cgctggactg
    18241 aatgcgcact tcctgcggct ctttcataaa gcggcgggta atgcgacgaa tcgcttccgg
    18301 catggttgca gagaacagag cggtctgatg accttccggg atctgcgcca taatggtttc
    18361 aacgtcttcg atgaagccca tgcgcagcat ttcgtcagct tcatccagaa ccagaccgct
    18421 cagtttagag aggtccagag tgccacgttt caggtggtcc agcagacggc ccggagtacc
    18481 gacaacgatc tgcggcccct gacgcagggc gcgtaattgc acgtcataac gctggccgcc
    18541 gtacagggca accacgttta cgccgcgcat gtgtttagag aaatccgtca ttgcttcagc
    18601 aacctgtacc gccagttcgc gggtcggtgc cagcaccaga atctgtggtg ctttcagctc
    18661 aggatcaaga ttctgcagca gaggtaaaga gaatgctgca gtttttccgc tccccgtctg
    18721 ggccataccc agaacgtcgc ggccattcag cagatgtgga atacactctg cctgaattgg
    18781 agatggtttt tcgtaaccca gatcgttaag ggcttcaagg ataggagcct tcaggcccag
    18841 atctgcaaaa gtggtttcga attcagccat gtagtacgtg tgcctcaaaa ttaatggcgg
    18901 ccagtctaca taactcatca tgaaattgat cagcaatttt cattgaaaag tgtgaaccgg
    18961 ctcaaagtag gtgtattaac gaacaacaac gccctcaccc gttaaggtga tggcaatcaa
    19021 aaaagattac gggctgatgt gtacgtcagc tattgctggt ccgattctgc caggtcatct
    19081 tggtcctggc ccaggagcga taattccaac aatgcgtatc ggtgctcaac aaagttatga
    19141 acgttgttgg caaccgccag tttgaacagt gccgtggcgc tgtccaaatc ccccagactt
    19201 aggtagtact tacctaaata gaagttggtt tcactgagat gctcagcgag cgaggtgtta
    19261 tccgttgcgt ccgccttgag cctttccatt aacgtttgtt cgctaatgtt gcccaggtag
    19321 aactcgacaa tgttccatcc ccactgttcc ttgtccgatt tttcgaagtg ctgtttcaac
    19381 acttctttag cctgcttctc atcgagcttc tgctcggcga gataaagcca cagactacgg
    19441 aaaggatcat tgggatcgtc ttgataaaac gccagcagat catcttgcgc taacttgtca
    19501 cgaccgccgt aatataatgc gatcccgcga ttcaagtgcg cgtagttgta agttggatca
    19561 agctcaagta cagaatcaaa cgcttcatag gcagcatcaa aattgcctgc ctgcgttaaa
    19621 tatataccta agtaattgaa tacttcaggc atatccggtc ggattgccag cgcttgcgaa
    19681 aaatcgttac gcgctaatgc cctcagaccg agactatcat acaacactcc gcgctcatat
    19741 aaaagctgtg cgcgttcgtc atcggttaaa gcccgactgg caaggatttg ttccatacgt
    19801 gccagaatca cttcctgctg taaagtcggt tgcaatggta ccgcgaggac ttcactttta
    19861 cgccaggaag tattactgca tcctgcaagc gtaagtgctg tcgcaacgaa acaccagcgc
    19921 aaaaaaggct tcatttccca ctcccgaaga ccacggttga atgaacgtcc tgttcccggt
    19981 tgctaacaag gcgtcctgcc cggttaaaag ccccccgccg cagcggaggg caaatggcaa
    20041 ccttactcgc cctgttcagc agccggagct tccggtgctg cagcaggttg agactgctca
    20101 gtcgcttctt taatgctcag acggatacgg ccctggcgat caacttccag aactttcacc
    20161 ggtacttcct gacccatctg caggtaatcg gtcactttct caacgcgttt gtcagcgatt
    20221 tgagagatgt gtaccagacc ttctttaccg ccgccgatgg caacaaatgc gccgaagtca
    20281 acgatacggg tcactttacc agtgtagacg cggcccactt caatttctgc agtgatctct
    20341 tcgatacgac gaatagcgtg tttcgctttc tcgccgtcgg tcgctgcgat cttcacagta
    20401 ccgtcatctt cgatttcgat ggtggtgccg gtttcttcgg tcagggcacg gataacagag
    20461 ccgcctttac cgataacatc tttgatcttg tccgggttga tcttgatggt atggatacgc
    20521 ggtgcgaact cagagatatc gccacgcggc gcgttgatcg cctgttccat tacgcccagg
    20581 atatgcagac gcgcaccttt agcctggttc agcgcaacct gcatgatctc tttggtgata
    20641 ccttcaattt tgatatccat ctgcaatgca gagataccgt cgcgggaacc cgcaactttg
    20701 aagtccatat cgcccaggtg atcttcgtcg cccaaaatgt cagacagtac aacgtagttg
    20761 tcgccttctt tcaccagacc cattgcgata cccgcaacgg cagctttgat tggcacacct
    20821 gcgtccatca gcgccagaga cgcaccgcac acggaagcca tagaagaaga accgttggat
    20881 tcagtgattt cagacacaac acgtacggtg tacgggaatt tgtccatatc cggcattact
    20941 gccagcacgc cgcgcttcgc cagacgaccg tgaccaattt cacgacgctt cggagaaccg
    21001 accatgccgg tttcgcctac ggagtacgga gggaaattgt agtggaacag gaaggtatcg
    21061 gtacgttcgc ccatcagttc atcaagaacc tgtgcgtcac gagcggtacc cagcgttgca
    21121 gtaaccagtg cctgcgtttc accacgggtg aacagcgcag aaccgtgagt acgcggcagc
    21181 acgccagtac gcacatccag accacggatc atatcttttt cacgaccatc gatacgcggt
    21241 tcgcctgcca gtacgcggct acgaacaacg tttttctcga tagcgtgcag aatttcaccc
    21301 agttcgtttt cgtccagggt ttcgtcttca gcaagcagcg tcgcgatggt ttcagatttg
    21361 atgacatcaa cctgcgcata acgctcttgt ttgtcggtga tgcggtaagc atcactcaga
    21421 cgagcttcag ccagtgcagc aacgcgcgcg ttcagcgctt cgtttaccgg ctccggctgc
    21481 cagtcccaac gcggtttacc ggcttctttc accagttcat tgatgttctg aataacaacc
    21541 tgctgttgtt catgaccgaa cactactgcg cccagcatct gatcttcgct cagcagttca
    21601 gcttcagatt caaccatcag tacagcggct tcagtaccgg caacaaccag atccagtttg
    21661 ctctctttca gctcgtcctg agtcgggttc agtacgtact ggtcattgat gtaacctacg
    21721 cgggcagcac caatcgggcc attgaacgga ataccagaca gagacagtgc tgcggaagca
    21781 ccaatcatcg cgacgatatc cgggttaacc tgcgggttaa cagaaaccac ggtggcgata
    21841 acctgaactt cgttgacgaa gccttccggg aacagcgggc gaatcgggcg gtcaatcaga
    21901 cgcgcgatca gggtttcgcc ttcgcttgga cgaccttcac gacggaagaa gctacccggg
    21961 atacgaccag cagcgtaggt acgctcctga tagttaacgg tcagtgggaa gaagtcctga
    22021 cctggtttgg cttttttctg gccaacaacg gtaacaaata ccgcggtgtc atccatgcta
    22081 accataacag cggcagtagc ctgacgagcc atcatgccgg tttccagagt cacggtgtgt
    22141 tggccgtact ggaatttacg aacgatcgga ttaagcaatg taatatcctt tctctttctt
    22201 agacagtacc ttacggcact ggtgttaata cccgatcttc tgcgcatcct cgcgactaat
    22261 gacaacccta acccagctct atgtgggtaa agcctctcat tagccgcgcg aacctctgca
    22321 acggaagatc attcatagca acaatacatt agtttccagt gaattgctgc cgtcagcttg
    22381 aaaaaagggg ccactcaggc ccccttttct gaaactcgca agaattagcg acgcagaccc
    22441 aggcgctcga tgagctgggt gtaacgtgct acgtctttac gtttcaggta gtcgagcagt
    22501 ttacgacgct gagaaaccat gcgcagcaga ccacgacggc tgtggtgatc ttttttgtgc
    22561 tctgcaaagt ggccctgcag gtggttgatc tgtgcagtca gcagtgctac ctgaacttcg
    22621 gtagaaccgg tgtcgtttgc gtcacgacca aactcagaaa cgattttagc tgttgcttca
    22681 gtacttagag acattttaaa actccaaagt atatagaatg aaaggacgcc gatctctaat
    22741 tcagcgatcc cagtgtacgt tacgcaaagt gttaaacaat ttacgcgacg ttaagcggca
    22801 gtattctact cgtagcgacc tgttatcgca agacggttaa cattacgccg ggtattcaat
    22861 taccaggcga cgaggcgcaa cgcggccttc atcgtcaatt tcgcccatac cgataaactt
    22921 gccgttctca ccttccgtga tgcgaaccag tccttccagc ggcgcaccag atgtacgaac
    22981 cgggttacca tttttgaagt aaacagaaga cgttaacgga agattcacca ccggatagtc
    23041 cgaagctgga ctgtccattg gcatcagtaa tggatcaagt aactccgcag ccggaatatc
    23101 ctgctgttcg gcttgttcga ccagttcacg cagatgttcc agggtcacca tccgttcaac
    23161 cggatattta cttaccgcca gacgacgcag gtaaataaca tgcgcgccac aaccgagttt
    23221 ttcacccagg tcatcaatga tggtgcggat ataagtgcct tttgagcagt gaatttccag
    23281 ctccagctca ttgccttcgt ggcgaataaa cagcaattca taaacggtaa tcgggcgcgc
    23341 ttcacgcggt acttcaatgc cctgacgcgc atattcgtac agttttttgc cctggtattt
    23401 cagtgctgaa tacatcgatg ggatctgttc gatatcccca cggaaagtat ccagtgccac
    23461 cgccagttgc tctgcgctaa aggttaccgg acgttcttca acgatttgtc catcggcgtc
    23521 agacgtatcg gtacgctgtc caagacgcgc aatcacccga tagcgtttgt cggagtccag
    23581 cagatactgg gaaaacttcg tcgcttcccc gaggcaaatt ggcaacatgc cagttgccag
    23641 cgggtccagc gcaccggtat gcccggcacg gttggcgtta taaatccgtt tcactttttg
    23701 cagcgcatcg ttgctggaca taccctgagg tttatccagc aacaaaacgc cgttaatgtc
    23761 gcgaccgcga cgacgaggac gactcattag tcctccttgc tgtcgtccgg gttaacacga
    23821 cgttcttcgt catgtttgac cacgctggtc accaggtttg acatgcgcat cccttcaacc
    23881 agcgagttgt cgtagaagaa ggtcagttcc ggcacgatac gcaggcgcat cgctttcccc
    23941 agcaggctgc ggatgaaacc agaagcttct tgcaacgctt tgatgcccgc tttaactgcg
    24001 tcttcatctt tgtcgttgag gaacgtcaca tatactttgg catacgccag gtcgcgagac
    24061 atttcgacac cggaaacggt ggtcatcatg cccagacgag gatctttaat ttcacgctgc
    24121 aggatgagag cgatctcttt ttgcatttcc tgcgctacgc gctgcgggcg accaaattct
    24181 ttcgccataa taaattctcc tgacaaaaaa ggggctgtta gccccttttt aaaattaatt
    24241 tcaggtggaa gggctgttca cgttggcctg ataagacgcg ccagcgtcac atcaggcaac
    24301 ggctgccgga tgcggcgtaa aagccttatc cggcctacaa cccagacaac cttaagcgat
    24361 ggtacgttgg atttcgatga tctcgaatac ttcgatcaca tcgccagtgc ggacatcgtt
    24421 gtagttctta acgccgatac cacattccat accgttacgg acttcgttaa cgtcatcttt
    24481 gaagcggcgc agggactcca gctcgccttc gtagataacc acgttgtcgc gcagaacgcg
    24541 gatcgggttg tgacgtttaa ccacaccttc ggtaaccata caacctgcaa tggcaccaaa
    24601 tttcggtgat ttgaatacgt cacgaacttc cgccagaccg ataatctgtt gtttcagttc
    24661 cggagacagc ataccgctca ttgccgcttt cacttcgtcg atcaggttat agatgacgga
    24721 gtagtaacgc agatccaggc tttccgcttc aatcacttta cgtgcagagg catcagcacg
    24781 tacgttaaag ccaaccagga tggcgttgga cgccgcagcc agggtggcgt cggtttcggt
    24841 gataccacct acgccagaac cgatgatctt cactttaact tcgtcagtag acagtttcag
    24901 caaggagtcg gagatcgctt cgacagaacc ctgtacgtct gccttcagga cgatattcac
    24961 ttcgtgaact tcgccttcgg tcatgttggc gaacatgttc tcgagtttag atttctgctg
    25021 acgcgccagt ttaacttcgc ggaatttacc ctgacgatag agtgcaactt cgcgcgcttt
    25081 cttctcgtca cgtacaacgg taacttcatc acccgcagcc ggaacaccgg acaggccgag
    25141 gatttccacc ggaatggacg gacccgcttc cagcacttcc tgacccagtt cgttacgcat
    25201 cgcacgaaca cgaccgtatt cgaagccaca cagaacgata tcgcccttgt gcagagtacc
    25261 ttcacgtacc agaacagtag caaccggacc acgaccttta tcgaggaagg attcgataac
    25321 cgcaccgctc gccatacctt tacgtaccgc tttcagctcc agaacttccg cctgcagcag
    25381 gatagcgtcc agcagttcat cgatgccggt acccgctttc gcagatacgt gtacgaactg
    25441 gctttcaccg ccccactctt ccggcaggat gccatactgg gagagttcgt tcttaacgcg
    25501 atccggatcg gcttctggtt tatcgatctt gttcactgca accaccaccg gtacctgcgc
    25561 cgctttcgcg tgctggattg cttcgatggt ctgcggcatc acgccgtcgt cggcagcaac
    25621 aaccaagact acgatgtccg ttgcctgcgc accacgtgca cgcattgaag taaacgcggc
    25681 gtgccccggg gtgtccagga aggtgatcat gccgttttca gtttcaacgt ggtatgcacc
    25741 aatgtgctgg gtaatgccgc ccgcttcgcc agaggcaact ttcgttgaac gaatgtagtc
    25801 cagcagagag gttttaccgt ggtcaacgtg acccatgatg gtcacaaccg gcgcgcgcgg
    25861 ttcagccgca gcacccgtgt cacggtcgct cattaccgcc tcttccagct cgttttcacg
    25921 acgcaggata actttgtggc ccatctcttc agcaaccagc tgtgcggttt cctgatcgat
    25981 aacctggttg atggttgcca ttgcgcccag tttcatcatc gctttaatga cctgagagcc
    26041 tttaaccgcc atcttgttcg ccagttcgcc aacggtgatg gtttcgccga tcacaacgtc
    26101 acggttaacg gcctgagcag gcttctggaa gccttgctgc agcgaagaac ctttacgttt
    26161 tccgccttta ccgccacgta ctgctgcgcg tgcttcttca cgatcagctt ttgattcggc
    26221 gtgtttgttg cctttcttcg gacgcgcagc tttcgcgtta cgaccacggc cacggccgcc
    26281 ttcgacttca cgatcgcttt cgtcttctgc ctggcgagca tgttgagaag tagtgacgtg
    26341 ataatcgctg gaatcttcag tcggttccgc gttatcagtc catttgtttt cttccgccat
    26401 acgacgtgct tcttcagcaa cgcgacgtgc ttcttcttcg agtttacgac gcgcttcttc
    26461 ttcagcttta cgcttgagct ctgcagcttc ctgctcacgg cgggcttttt cagcctgggc
    26521 gtttttagtc atatcgtctt gttgattgct cactttgtct ttttccgcag cttcacgttt
    26581 cgcttgttca gcagcttcac gcttagcttg ttctgcggcc tcacgttcag ctttttgttg
    26641 cgcctcgcgt ttagccgatt cttctgcctc acgacgggct tgctcttccg cttcacgctg
    26701 cgcttgctct tccgctgcaa ggcgttcagc ctcttgcgga tcgcgtttca caaaggtgcg
    26761 tttcttgcgg acttcgattt gtaccgattt gctttttcca ccggtaccag gaatgttaag
    26821 ggtgctgcgt gttttacgtt gcagcgtcaa tttgtccggg cctgaatttt tctgattcag
    26881 gtggtcaatc aaagtctgtt tctcttgtgc agacacagag tcgtcagcag acttccggat
    26941 acctgcatca gcaaattgct gtaccaggcg ttccacggag gtctgtcgct ctgcagccag
    27001 cgttttaatc gttacatctg tcatgctgtt ccttcctgct acagtttatt acgcttcgtc
    27061 accaaaccag caaatattac gggcagccat aatcagtgct ccggcttttt cgtcggtcaa
    27121 cccttcgata tcagccagat catcaatgcc ctgttcggcg agatcttcca gcgtacaaac
    27181 gccacgggcg gccagtttga atgccaaatc acgatctacc ccttcaaggt tcagcagatc
    27241 gtcagccggt ttgttatcac cgaggctttc ttcctgggcc tgtgcaatgg tggccagtgc
    27301 atttttagca cgctcgcgca gtgcttcaac ggtcggctca tcaaggcctt cgatttccaa
    27361 cagctctttc atcggcacat aggccagttc ttccagcgtc gagaaacctt cttctaccag
    27421 aacagtcgcg aagtcttcgt cgatgtcgag atatttggtg aaggtgtcga tcgctgcgtg
    27481 cgcttccgcc tgatgcttag cctgcaggtc gtcaacggtc attacgttga gctcccaacc
    27541 gctcagctgc gaagccagac gcacgttctg accgttacgg ccaatcgcct gcgccaggtt
    27601 accggcttca acggcgatat ccatggtgtg tttatcttcg tccaccacga tagaagcaac
    27661 gtctgccggt gccattgcgt taatcacaaa ctgcgccggg ttatcatccc acaggacgat
    27721 atcgatacgc tcgccgccca gttcagtaga aaccgcctga acacgcgcgc cacgcatacc
    27781 tacacaggca cctaccggat cgatacgttt atcgttggtt ttcaccgcga ttttcgcacg
    27841 agaacccgga tcgcgagccg ctgctttaat ttcaatcact tcttcgccga tttctggcac
    27901 ttcaatacgg aacagttcga tcagcatttc cggcttggaa cgagtgacga acagttgcgc
    27961 gccacgcgct tccgggcgaa cggaatagag cacgccacga acgcggtcgc cagggcggaa
    28021 gttttcacgc ggcagcatat cttcgcgcag gatcacggct tcagcattgt tgcccagatc
    28081 cagagagatg ttgtcgcggt ttactttttt caccacgccg gtgatgattt caccttcgtg
    28141 ttcacggaac tgatcaacca ccatcgcacg ttcggcttca cgcactttct gcacgataac
    28201 ctgttttgcc gtctgggtag tgatacggtc aaaggtaaca gactcaatct gatcttcaac
    28261 gtaatcgccc aggttcaggc tttcatcttc ataacgtgcg gcttcaaggg tgatttcctt
    28321 ggtcggctgg gtgacttcat caacaactaa ccagcgacgg aaggtgtcaa aatcaccgct
    28381 tttgcgatcg atctgtacac ggacgtcgat ctcttgctca tattttttct ttgttgctgt
    28441 cgccagcgcg ctttccaatg cttcgaaaat cttctcgcga ggtagcgcct tttcattgga
    28501 tacggcttca actacagcca aaatttcttt gttcatcgcg ggcttttcac ctcatccaga
    28561 ctattaaaag tggggaacca ggttcgcctt ctggatatta ctcagcgcga acacttcatc
    28621 tttaccttcg acggtaactg tgatcatttc accgtctacc gctttgataa cgccctgcca
    28681 tttacgacgg ttttgtaccg ccatacggag aaccagagtc acctcttctc cgacaaaacg
    28741 ggcgtagtgt tcagccgtga acagtgggcg atcgagaccc ggtgaggaga cttccaggtt
    28801 ataagcaacg gtgatgggat cttcaacatc cagcacagca cttacctggt ggctcacatc
    28861 agcacaatca tcaacattga tgccatcttc actatcaata tagatgcgca gtgtggatgt
    28921 gcgaccgcga ataaattcga tgccaaccag ttcaaaaccc agggcctcaa ctggcgcagt
    28981 aatcatctct gttaattttt gctctaatgt ggacaagccc acccccaaga cataaaaaaa
    29041 gggcctaaag cccagttatt ctgtagtcag ataacaaaaa accccgataa atcggggctt
    29101 tatataactg aaccctataa ccgcaactgc ggtctggagc actttccaga aggatttttt
    29161 caaatcccac tacgaaggcc gaagtcttca cagtatattt gaaaaaggac tctaagggaa
    29221 agtggttgcg ggggccggat ttgaaccgac gaccttcggg ttatgagccc gacgagctac
    29281 caggctgctc caccccgcgc ctgaaacgtg gcaaattcta ctcgttttgg gtaaaaaatg
    29341 caaatactgc tgggatttgg tgtaccgaga cgggacgtaa aatctgcaag cattatagtg
    29401 atccatgcca cattttgtca acgtttattg ctaatcacgt gaatgaatat ccagttcact
    29461 ttcatttgtt gaatactttt gccttctcct gttctccctt aagcgcatta ttttacaaaa
    29521 aacacactaa actcttcctg tctccgataa aagatgatta aatgaaaact catttatttt
    29581 gcataaaaat tcagtgagag cggaaatcca ggctcatcat cagttaatta agcagggtgt
    29641 tattttatga cgacgattct caagcatctc ccggtaggtc aacgtattgg tatcgctttt
    29701 tctggcggtc tggacaccag tgccgcactg ctgtggatgc gacaaaaggg agcggttcct
    29761 tatgcatata ctgcaaacct gggccagcca gacgaagagg attatgatgc gatccctcgt
    29821 cgtgccatgg aatacggcgc ggagaacgca cgtctgatcg actgccgcaa acaactggtg
    29881 gccgaaggta ttgccgctat tcagtgtggc gcatttcata acaccaccgg cggcctgacc
    29941 tatttcaaca cgacgccgct gggccgcgcc gtgactggta ccatgctggt tgctgcgatg
    30001 aaagaagatg gcgtgaatat ctggggtgac ggtagcacct ataaaggaaa cgatatcgaa
    30061 cgtttctatc gttacggtct gctgaccaat gctgaactgc agatttacaa accgtggctt
    30121 gatactgact ttattgatga actgggcggc cgtcatgaaa tgtctgaatt tatgattgcc
    30181 tgcggtttcg actacaaaat gtctgtcgaa aaagcctact ccacagactc caacatgctt
    30241 ggtgcaacgc atgaagcgaa ggatctggaa tacctcaact ccagcgtcaa aatcgtcaac
    30301 ccgattatgg gcgtgaagtt ctgggatgag agcgtgaaga tcccggcaga agaagtcaca
    30361 gtacgctttg agcaaggtca tccggtggcg ctgaacggta aaacctttag cgacgacgta
    30421 gaaatgatgc tggaagctaa ccgcatcggc ggtcgtcacg gcctgggcat gagcgaccag
    30481 attgaaaacc gtatcatcga agcgaaaagc cgtggtattt acgaagctcc ggggatggca
    30541 ctgctgcaca ttgcgtatga acgcctgttg accggtattc acaacgaaga caccattgag
    30601 cagtatcacg cgcatggtcg tcagttgggc cgtctgctgt accaggggcg ttggtttgac
    30661 tcccaggcgc tgatgctgcg tgactctctg caacgctggg ttgccagcca gatcactggt
    30721 gaagttaccc tggagctgcg ccgtgggaac gattattcaa tcctgaatac cgtctcagag
    30781 aacctgacct acaagccaga gcgtctgacg atggaaaaag gcgactcggt gttctcgcca
    30841 gatgatcgta ttggtcaatt gaccatgcgt aacctggata tcactgatac ccgagagaaa
    30901 ctttttggtt atgccaaaac tggcctgctc tcctcctctg ccacttcagg cgtgccgcag
    30961 gtggagaatc tggaaaacaa agttaagtaa tatcatagct ttcgtgctaa aggccgcaaa
    31021 tgcggccttt ttttacggct aagagaatgt gactgcgttt aggggccacc atgtccgaat
    31081 tcggaattaa agtaaaagtt aaatgaaata aagtaaattt cagcgcattc tatttttact
    31141 ttatgttttt atgctcagta aaaggaatga ccgatgaatg gtgaatattt tgtacgcctc
    31201 gcattacata ctctgaaatg cactcaaaaa gatttagcaa gccacttagg tgtttcctca
    31261 acacaaatta gcaagtggaa aaaaggggaa cacatgtccg ctgatatgga aaaaaagttc
    31321 agaaatatta cacaaatagg agattattct c
//
LOCUS       DAJVTL010000042        30920 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.042, whole genome shotgun sequence.
ACCESSION   DAJVTL010000042 DAJVTL010000000
VERSION     DAJVTL010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30920
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.042"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            58..306
                     /locus_tag="OQQ26_001802"
     CDS             58..306
                     /locus_tag="OQQ26_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HCS1857273.1"
                     /translation="MVNREIVMDYILSCLQDLVENGVEIKPDSDLVNDLGLESIKVMD
                     LLMMLEDRFDISIPINILLDVKTPAQLMETLLPWLENK"
     gene            306..1478
                     /locus_tag="OQQ26_001803"
     CDS             306..1478
                     /locus_tag="OQQ26_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HCS1857274.1"
                     /translation="MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKK
                     VILAGTNNYLGLTFNHDAISEGQAALAAQGTSTTGSRMANGSYAPHLALEKEIAEFFN
                     RPTAIVFSTGYTANLGVISALADHNAVVLLDADSHASIYDACSLGGAEIIRFRHNDAK
                     DLERRMVRLGERAKEAIIIVEGIYSMLGDVAPLAEIVDIKRRLGGYLIVDEAHSFGVL
                     GATGRGLAEAVGVEDDVDIIVGTFSKSLASIGGFAVGSEAMEVLRYGSRPYIFTASPS
                     PSCIATVRSSLRTIATQPELRQKLMDNANHLYDGLQKLGYELSSHISPVVPVIIGSKE
                     DGLRIWRELISLGVYVNLILPPAAPAGITLLRCSVNAAHSREQIDAIIQAFATLKQ"
     gene            complement(1513..2592)
                     /gene="lptG"
                     /locus_tag="OQQ26_001804"
     CDS             complement(1513..2592)
                     /gene="lptG"
                     /locus_tag="OQQ26_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HCS1857275.1"
                     /translation="MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGY
                     RWTQAVLVALMTLPRTLVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALV
                     ALVAGILWTVSLGAIDEWVASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVT
                     VKSLNEQGQPVGVEIFHYRDDLSLESYIYARSATIEDDKTWVLHGVNHKKWLNGKETL
                     ETSDNLAWQSAFTSMDLEELSMPGNTFSVRQLNHYIHYLQETGQPSSEYRLALWEKLG
                     QPILTLAMILLAVPFTFSAPRSPGMGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAP
                     VTALGLPIAFVLVALSLVYWYDRQH"
     gene            complement(2589..3658)
                     /gene="lptF"
                     /locus_tag="OQQ26_001805"
                     /pseudo
     CDS             complement(2589..3658)
                     /gene="lptF"
                     /locus_tag="OQQ26_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708798.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
     gene            complement(3689..4249)
                     /locus_tag="OQQ26_001806"
     CDS             complement(3689..4249)
                     /locus_tag="OQQ26_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708799.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HCS1857276.1"
                     /translation="MSSRLIIALIIMLLAPGVQAHNFVTGKTVTPVYIQEGGELLLNS
                     DDEIHYQKWNSTQLAGKVRIIQYIAGRKSAKKKNSLLIKAVEAANFPQDRFQPTTIVN
                     TDDAIFGTGYFVVGKIEKNKRRYPWAQFVIDGNGQGRVAWRLPEQSSTILVLNKAGQI
                     QWAKDGSLTPEEVDHVIELAQKLINE"
     gene            complement(4261..5085)
                     /locus_tag="OQQ26_001807"
     CDS             complement(4261..5085)
                     /locus_tag="OQQ26_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857277.1"
                     /translation="MMRKYFPLEASERLFVAIEEDDVVDAQVSLPPTIALSCTTEIIH
                     DNYALCLQFWLNGVNRQELLRLVRKQAKGDELTADERKQFKYMRARYKHLRFAQRLYL
                     KKHQAGFLFGKTTVFLGRFQDGFRNGKKNIVSYYGNLLRIYLSSPVWSLVNYSLRHRQ
                     LESVSGFIAYRQKQMHALKEIIAKPRLTGREFHDVRKIISQQVSYYDTLRSLDPENKE
                     ALQISRFLAAINGLMGDKHDDMVADDMENRQSYDAPVALDSDIRQRLELLISRFPL"
     gene            complement(5085..6344)
                     /locus_tag="OQQ26_001808"
     CDS             complement(5085..6344)
                     /locus_tag="OQQ26_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005036594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HCS1857278.1"
                     /translation="MSALLGLLALSCAGKGMTPAMFGVLVIVQSYAKSISDFIKFQTW
                     QLVVQYGTPALTNNNPQQFRNVVSFSSSLDIVSGAVAIVGGIALLPFLSHSLGLDDQS
                     FWLAALYCTLIPSMASSTPTGILRAVDRFDLIAVQQATKPFLRSAGSVAAWYFDFGFA
                     GFVIAWYVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFESARHIKGAWSFVWSTNIA
                     HSIWSARNSCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAGLLGKSFYPEVMRLDPR
                     TTRPWLLGVKSGLLAGGIGILVALAVLIVGKPLISLVFGVKYLEAYDLIQVMLGAIVI
                     SMLGFPQESLLLMAGKQRAFLVAQTIASIGYIVLLFMFCHLFGVLGAAFAYFGGQCLD
                     VALSLIPTLKAFFQRHSLLYNAAGEKS"
     gene            complement(6485..7243)
                     /locus_tag="OQQ26_001809"
     CDS             complement(6485..7243)
                     /locus_tag="OQQ26_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857279.1"
                     /translation="MDALQTQTVISTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKS
                     LQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAV
                     IMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGIERATGKISMF
                     LAQRERRLYQQMAQYRPELIIRLGIDIDTAISRKPDHDYAELQDKIGVMSTIGYNGTK
                     ILEIDSRAPYSEVLEQAQKAVSLVAIVSDRRSLT"
     gene            complement(7275..7988)
                     /locus_tag="OQQ26_001810"
     CDS             complement(7275..7988)
                     /locus_tag="OQQ26_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="HCS1857280.1"
                     /translation="MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPA
                     EHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPSTPLGNITALVIYLLSC
                     WRAYKFRKMLCKSQQGFLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELK
                     LYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGR
                     QPADEILQASLRAIHAALS"
     gene            8162..8854
                     /locus_tag="OQQ26_001811"
                     /pseudo
     CDS             8162..8854
                     /locus_tag="OQQ26_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417460.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
     gene            complement(8902..10399)
                     /gene="pitB"
                     /locus_tag="OQQ26_001812"
                     /pseudo
     CDS             complement(8902..10399)
                     /gene="pitB"
                     /locus_tag="OQQ26_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417461.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitB"
     gene            complement(10691..12550)
                     /gene="gss"
                     /locus_tag="OQQ26_001813"
     CDS             complement(10691..12550)
                     /gene="gss"
                     /locus_tag="OQQ26_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HCS1857281.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
                     RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
                     AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
                     WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEITGELLKISGARLEN
                     KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
                     ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
                     SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
                     NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
                     IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
                     PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
                     YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKE"
     gene            12755..13621
                     /gene="yghU"
                     /locus_tag="OQQ26_001814"
     CDS             12755..13621
                     /gene="yghU"
                     /locus_tag="OQQ26_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HCS1857282.1"
                     /translation="MTDNTYQPAKVWTWHKSAGGAFANINRPVSGPTHEKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP
                     ALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG
                     FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGN
                     VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS
                     DFETNTEDKRQG"
     gene            complement(13744..13992)
                     /gene="hybG"
                     /locus_tag="OQQ26_001815"
     CDS             complement(13744..13992)
                     /gene="hybG"
                     /locus_tag="OQQ26_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HCS1857283.1"
                     /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
                     LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
     gene            complement(14126..14467)
                     /gene="hypA"
                     /locus_tag="OQQ26_001816"
     CDS             complement(14126..14467)
                     /gene="hypA"
                     /locus_tag="OQQ26_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HCS1857284.1"
                     /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
                     RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG
                     DSLIVKSIEVE"
     gene            complement(14460..14948)
                     /gene="hybE"
                     /locus_tag="OQQ26_001817"
     CDS             complement(14460..14948)
                     /gene="hybE"
                     /locus_tag="OQQ26_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HCS1857285.1"
                     /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
                     FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
                     SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE
                     NA"
     gene            complement(14941..15435)
                     /locus_tag="OQQ26_001818"
     CDS             complement(14941..15435)
                     /locus_tag="OQQ26_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HCS1857286.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
                     AIHD"
     gene            complement(15435..17138)
                     /gene="hybC"
                     /locus_tag="OQQ26_001819"
     CDS             complement(15435..17138)
                     /gene="hybC"
                     /locus_tag="OQQ26_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HCS1857287.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
                     AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTCG
                     KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
                     STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
                     GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            complement(17135..18313)
                     /gene="hybB"
                     /locus_tag="OQQ26_001820"
     CDS             complement(17135..18313)
                     /gene="hybB"
                     /locus_tag="OQQ26_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HCS1857288.1"
                     /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLQRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
                     IMGFSIVIFEGSLVQAGLRGNGSDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS
                     LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
                     VAFNPGGGYAYFPTWEELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            complement(18303..19289)
                     /gene="hybA"
                     /locus_tag="OQQ26_001821"
     CDS             complement(18303..19289)
                     /gene="hybA"
                     /locus_tag="OQQ26_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HCS1857289.1"
                     /translation="MNRRNFIKAASRGALLTGALPSVSHAAAENRPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ELKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
                     LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
     gene            complement(19292..20410)
                     /gene="hybO"
                     /locus_tag="OQQ26_001822"
     CDS             complement(19292..20410)
                     /gene="hybO"
                     /locus_tag="OQQ26_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HCS1857290.1"
                     /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
                     GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            complement(20599..20886)
                     /locus_tag="OQQ26_001823"
     CDS             complement(20599..20886)
                     /locus_tag="OQQ26_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HCS1857291.1"
                     /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
     gene            complement(21005..21892)
                     /locus_tag="OQQ26_001824"
     CDS             complement(21005..21892)
                     /locus_tag="OQQ26_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HCS1857292.1"
                     /translation="MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTA
                     LALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVV
                     VVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTKLM
                     NDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADV
                     AKIEAPLLLHFAELDTRINEGWPAYEAVLKANNKVYEAYIYPGVNHGFHNDSTPRYDK
                     SAADLAWQRTLKWFDKYLS"
     gene            22049..23089
                     /gene="gpr"
                     /locus_tag="OQQ26_001825"
     CDS             22049..23089
                     /gene="gpr"
                     /locus_tag="OQQ26_001825"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HCS1857293.1"
                     /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
                     QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
                     WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
                     KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
                     CIAFTPLAQGLLTGKYLNGIPEDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
                     RGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTEELAQIDQHIAD
                     GELNLWQASSDK"
     gene            complement(23129..23623)
                     /locus_tag="OQQ26_001826"
     CDS             complement(23129..23623)
                     /locus_tag="OQQ26_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HCS1857294.1"
                     /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN
                     IFSMAESDLILVLLSLVDMMLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            23814..24698
                     /gene="yghA"
                     /locus_tag="OQQ26_001827"
     CDS             23814..24698
                     /gene="yghA"
                     /locus_tag="OQQ26_001827"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HCS1857295.1"
                     /translation="MSHLKDPTTQYYTGEYPKQKQPTPSIQAKMTPVPDCGEKTYVGS
                     GRLKDRKALVTGGDSGIGRAAAISYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
                     VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
                     VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA
                     EKGIRVNIVVPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(24857..25282)
                     /gene="exbD"
                     /locus_tag="OQQ26_001828"
     CDS             complement(24857..25282)
                     /gene="exbD"
                     /locus_tag="OQQ26_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HCS1857296.1"
                     /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNAVTEGKKDTTI
                     FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
     gene            complement(25289..26023)
                     /gene="exbB"
                     /locus_tag="OQQ26_001829"
     CDS             complement(25289..26023)
                     /gene="exbB"
                     /locus_tag="OQQ26_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HCS1857297.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSD
                     DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
                     LQSRDLDLEASAAAHPVRVAQKLRAG"
     gene            26275..27462
                     /gene="metC"
                     /locus_tag="OQQ26_001830"
     CDS             26275..27462
                     /gene="metC"
                     /locus_tag="OQQ26_001830"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HCS1857298.1"
                     /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSMEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFPCGAAAVTNSILAFVEQGD
                     HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
                     MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
                     MIGTAVCNARCWEQLRENAYLMGQMVDADTAYMTSRGLRTLGVRLRQHHESSLKVAEW
                     LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNDEELANYLDNFSLF
                     SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA
                     RIV"
     gene            27602..28261
                     /locus_tag="OQQ26_001831"
     CDS             27602..28261
                     /locus_tag="OQQ26_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1857299.1"
                     /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLILAGALIAQGVMDFLPTITILTAAASLGCWLSYIQGRWLGNTKTVKGW
                     LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
                     GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCN
                     A"
     gene            complement(28301..29200)
                     /gene="yqhC"
                     /locus_tag="OQQ26_001832"
     CDS             complement(28301..29200)
                     /gene="yqhC"
                     /locus_tag="OQQ26_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YqhC"
                     /protein_id="HCS1857300.1"
                     /translation="MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTP
                     VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN
                     VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG
                     KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN
                     MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRAMQGN"
     gene            29394..30557
                     /gene="yqhD"
                     /locus_tag="OQQ26_001833"
     CDS             29394..30557
                     /gene="yqhD"
                     /locus_tag="OQQ26_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HCS1857301.1"
                     /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT
                     GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK
                     FIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK
                     QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE
                     GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM
                     HGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF
                     EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR"
     gene            30662..>30920
                     /locus_tag="OQQ26_001834"
     CDS             30662..>30920
                     /locus_tag="OQQ26_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCS1857302.1"
                     /translation="MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRS
                     IDTAAAYKNQEGVGKALKNASVNREELFITTKLWNDDHKRPR"
BASE COUNT         7769 a         8192 c         7656 g         7303 t
ORIGIN      
        1 acgcattacg caacgggcta ttttgattgt cttgtttaaa ggtgtgttaa cgtttctatg
       61 gtaaatcgtg aaatagtaat ggattacatc ctttcctgtt tacaggattt ggtcgaaaac
      121 ggtgtggaaa ttaagcccga cagcgatctc gtcaacgatc ttggcctaga gtcgatcaaa
      181 gtgatggatc tcttaatgat gctggaagac agattcgata tttccattcc tattaatatt
      241 ctgctggatg tcaaaacccc tgcgcaatta atggaaactc tacttccatg gctggagaat
      301 aaataatggg gctatacgat aaatatgcgc gccttgctgg cgagcgactg caatttagtg
      361 acaacgggtt aacaccgttt ggcacctgta ttgatgaagt gtattccgcc accgaaggcc
      421 ggatcggcaa taaaaaagtg attctggccg ggaccaataa ttatctcggt ttaaccttta
      481 atcatgatgc catcagcgaa ggtcaggcag cgttagcggc ccaaggcacc agcaccaccg
      541 gttctcgtat ggcaaacggc agttatgcgc cgcacctggc gttagagaaa gaaattgccg
      601 agtttttcaa tcgccctacc gctatcgttt tttcaaccgg ttataccgct aatttaggcg
      661 tcatcagcgc acttgccgac cataacgccg tggtgttact ggatgccgac agccacgcca
      721 gtatttatga cgcctgttct ctcggtggcg cggaaattat tcgtttccgc cataacgatg
      781 ctaaagatct ggaacggcgc atggttcgcc tcggtgaacg ggcgaaagag gcgattatca
      841 tcgttgaggg catctacagc atgctcggtg acgttgcgcc gctggcggaa attgttgata
      901 tcaaacgtcg tctcggtggt tatttgattg tcgatgaagc gcattcgttt ggcgtgttag
      961 gcgcaacggg gcgcggactg gctgaagccg ttggcgttga agatgatgtg gatattatcg
     1021 ttggtacctt cagtaaaagt ctggcctcga ttggcggttt tgctgtcggt tcggaagcga
     1081 tggaagtgct gcgctacggc agccgcccgt atatttttac cgcctcccct tctccgtcct
     1141 gcattgcgac cgtgcgctca tcgttaagaa ctattgccac acaaccagag ctgcggcaaa
     1201 agctgatgga taacgccaac catctgtatg acggtctgca aaaactgggt tatgagttaa
     1261 gttcacatat tagcccggta gtgccggtaa taatcggttc gaaagaggac ggtttacgca
     1321 tctggcgcga gcttatttcg ctgggcgtgt atgtgaatct tatcctgcca cctgccgcac
     1381 ctgcaggcat cacgttgctg cgctgtagcg taaacgctgc ccacagtcgt gagcaaatcg
     1441 atgccatcat tcaggcattt gctactctga agcagtaatg tgagcccgcc gtggtgttgc
     1501 gccacggcgg gtttaatgtt gtctgtcata ccaatacact aggctcaacg ccaccagcac
     1561 aaacgctatc ggtaaaccga gcgcggtaac aggtgcgctc aacgcaaata gcaatcccag
     1621 attgaccatg atttgatagc tgatccaggt gagtaagcca acgatgacgc ctacagcgag
     1681 acggctaccc atccctggcg agcgcggagc gctaaaagta aacggtacag ccagcaaaat
     1741 catcgccagg gttaagatcg gttgccccag tttttcccac agtgcaaggc ggtattcgct
     1801 gctgggttgc ccggtttcct gcaaataatg gatgtaatga ttaagctgac ggacagaaaa
     1861 agtattgccc ggcatcgata actcttcaag atccatactg gtgaaggcag attgccaggc
     1921 aagattatct gatgtttcca gcgtttcttt accgttaagc cattttttat gattcacacc
     1981 atgcaggacc cacgttttgt cgtcttcaat ggtggcactg cgtgcataaa tgtaggattc
     2041 aagcgagaga tcgtcgcgat aatgaaatat ctccacgccc accggctggc cctgctcgtt
     2101 cagcgatttc accgtcacaa attcattgcc gcgcctggcc cacagcatat tgccggtaat
     2161 gtcatcgtcc tcccccaacg cggtggcggt cgatttgatt tgcaacgcct gttgctgcaa
     2221 tggcgacgct acccactcat ctatcgcgcc taacgaaaca gtccacaata tccctgcaac
     2281 cagcgccacc agtgcaatac ggaagataga aaaccccgtg ctgcgaatgg cggtaagctc
     2341 actgtttttc gataactgcc ccaggccgac aatccctccc aataaggcga taaatggcga
     2401 aagttcgacc agtgtgcgcg gtaaggtcat tagcgccacc agcaccgcct gagtccagcg
     2461 ataaccgccc gggctgacat catccagttc gttaatcagg ttgaaggtgg taaaaagcgg
     2521 cagcaatagc cctgcggcgg cggcaaaacc gagaaagaga tgacggatta aatagcgact
     2581 gaaaacattc atcgggaaaa tttctgcagc aaagagaagt cgcgtgcgac cagcatcagc
     2641 aggcccatta gcatgagtcc gggtactaac cacaaaccag gaatgagagg aatcgcgccg
     2701 ttagccacca gcgtacggca gacgtcgccg ccataaaaaa tggcaataaa cagcaacgtc
     2761 agtggcaata atgttgaaaa tcgcccttgc cgcggtttta cccgacttaa tgaaatggcc
     2821 agcagcgcca tcaacaatgc tgtcaggcca cggctttgcc gccattgcag ttcggcatga
     2881 tcggcaggaa aggcggagcg cgccagctcc gtgaccgatt ttgctttgcg tttgacgtta
     2941 gggctttgat ccagcggatt cagatgtaat tgcagattac ggtagatctg ttcgttgtcg
     3001 tcacgaccct gatgatcgag aagataggca gtgccgttgt gcaacataac ggtcggtttc
     3061 tcgggtgatg ggtcaaccac atcaaccgaa cgggcgcgga aaatgcgggt tcgattggca
     3121 gtagaagtat aaatcagcgc gtcagtcagg cgattattat cctgatcaac cgtctgcgaa
     3181 aggatcattc gtccgttatc gttagtgtta aatttctttg cccgcaactg gcgaacatcc
     3241 agctccgact gcgactgctg ctccagttga taaatctgcg cataagccca cggacgacca
     3301 tacatcgaca gaagggtgac aaaaatactt agcggtatcg ccagataaag aacggctttg
     3361 tacaagcgtc ccggactgcc cccgccgcag agatagcggt aatttccgaa tcggtataca
     3421 tctgccctag cgtcacgcca actgacacat acagtccaac aggtaacaac atctccagtg
     3481 caatcagcac cttgtagaaa acgatatcca gcacaacatc aagtgctaat gtaccatttg
     3541 ccgcttcggt cagataacgc tgtgcggagt agctggcgaa aataaagatc agaaaaccga
     3601 cgataatcag caccagacgg cgcgtaccac gcatgatgta gtgttcaacc agcttcattt
     3661 cactaacgcc ctcaatcctt tgaatttttt attcattgat cagtttctgc gccagctcaa
     3721 tgacatgatc tacctcttcc ggcgtcaggc taccgtcctt tgcccactga atttgcccgg
     3781 ctttattcag caccagaatg gttgaactct gctccggcaa gcgccaggca acgcgtccct
     3841 gtccattgcc gtcaataacg aattgcgccc acggatagcg gcgtttattt ttttcgattt
     3901 tgccaacaac aaaatagcca gtaccaaaga tggcatcatc ggtgttcaca atggtggtgg
     3961 gctgaaaacg atcctgcgga aagtttgccg cttcaaccgc tttaattaac agtgagttct
     4021 ttttcttcgc cgacttacgc ccggcgatat actggataat gcggactttt cccgccaatt
     4081 gtgtgctgtt ccacttttgg tagtgaattt cgtcgtcgct attcagaagc agctcaccgc
     4141 cttcctgaat ataaacaggg gtaaccgttt tgccagtgac gaaattgtgt gcctgcacac
     4201 ccggggctaa gagcatgata atcagcgcaa taatcaaacg agatgacatc attgctccgg
     4261 ttatagcgga aaacgcgaaa tcagcagctc taagcgctgg cgaatatcgc tatccagcgc
     4321 caccggtgca tcatacgact ggcggttttc catatcatcc gccaccatgt cgtcgtgttt
     4381 atcccccatc aggccattaa tggcggcgag gaaacgggaa atctgtaacg cctctttatt
     4441 ttcaggatca agcgatctta aggtgtcgta ataagaaacc tgctggctga tgatttttcg
     4501 cacatcatga aattccctgc cggttagtcg cggtttggca attatctctt tcagggcatg
     4561 catttgcttt tgccgatagg caataaaacc gcttacgctt tctaactgcc tatggcgtaa
     4621 tgaatagttc accaacgacc agaccggaga gcttaaataa atccgtaaca ggttgccgta
     4681 atacgacaca atatttttct taccgttacg aaacccgtcc tgaaaacgtc ccagaaaaac
     4741 ggtcgttttg ccgaataaaa atccggcctg atgcttcttt aaatacagcc gttgcgcaaa
     4801 acgcaggtgc ttgtagcgcg ctcgcatgta tttaaattgt ttgcgctcat cagcagtcag
     4861 ctcatcgcct ttggcttgtt tgcgaactaa acgcagtaat tcctgacgat taacgccatt
     4921 gagccagaat tgcaggcata acgcgtaatt atcatgaatg atttcggtgg tacaacttag
     4981 tgcaatagtc ggcggcaaac taacctgtgc atcaacgaca tcatcttctt caatcgcaac
     5041 aaatagacgc tcgctcgcct caagcgggaa atattttctc atcatcagga tttctctccg
     5101 gctgcgttat aaagcaagga atggcgctga aaaaatgcct ttaaggttgg aattaacgag
     5161 agcgccacgt ccagacattg cccaccgaag taagcaaacg ctgctcccag cacaccaaac
     5221 agatgacaga acatgaacag caatacgatg tagccgattg aggcgatggt ttgcgccacg
     5281 agaaaagcgc gctgttttcc cgccatcaat agcaatgact cctgcgggaa acccagcatc
     5341 gaaatcacaa ttgcgcccag catcacctga atcaggtcat acgcttcgag atacttaacg
     5401 ccaaacacca gcgaaatgag cggcttgccg acgatcaaca ccgcgagcgc caccagaata
     5461 ccgattccgc ccgccagtaa accggacttc acacctaaca accacggtct ggtggtgcgc
     5521 ggatctaaac gcatcacctc tgggtaaaaa cttttaccca gcaaacccgc tggcgttccg
     5581 gcggcgtcga agaatgtcat ggcgatttta aataacccgg cggcagcggg tcctaacacg
     5641 atccccacca acacagtgct gcacgagtta cgcgccgacc agatggagtg ggcaatgttg
     5701 gttgaccaga caaaactcca cgcgccttta atgtgtcggg cagactcaaa cagattcaat
     5761 ttgaaggcgt tatggatatt tctgcgacgt aattcgcgcg cggcaaacca ccagtacatg
     5821 gtgccgccaa ccagattcga cacgtaccag gcaataacaa aacccgcaaa accaaagtca
     5881 aaataccagg ctgcgacgct ccccgctgag cgcagaaaag gtttcgtcgc ctgctgtaca
     5941 gcaatcaaat caaagcgatc taccgcacgc agaatgccgg tcggcgtgga ggaagccatt
     6001 gaaggaatga gcgtgcaata cagcgccgcc agccaaaagc tttggtcatc cagacctaat
     6061 gaatgggaaa ggaatggcag taaggcaatg ccgccgacaa tcgccaccgc gccgctgacg
     6121 atatccagcg aggaggaaaa tgagacgaca ttgcgaaatt gctgcggatt attgttggtt
     6181 aatgctggtg ttccgtactg aaccaccagc tgccatgtct gaaacttaat aaaatcgctg
     6241 atcgacttgg cgtacgattg cacaatcact agtacgccaa acatggcggg cgtcatccct
     6301 ttaccggcac acgagagcgc caacagaccc agcaaggcgc tcacgacatt actggagcct
     6361 aacctaacca ggcgctattg cgaataatgg tgcgaaacgc gccatctgca aaccaatgtt
     6421 tgatgttaaa acccgccaat tcagcctgac cttatcgttg atagtaaaaa gtatcccgcc
     6481 agccttaagt taaacttcgg cggtcagaaa cgatggcaac cagagaaacc gccttctgtg
     6541 cctgttccag cacttcgctg tagggcgctc tggaatcaat ctcaagaatt tttgtgccgt
     6601 tataaccaat cgtcgacatg acgccgattt tgtcctgcaa ctcggcgtag tcgtgatctg
     6661 gcttgcgtga gatggcagta tcaatatcaa tgcccaggcg aataattaat tccgggcgat
     6721 attgcgccat ttgttggtat aaacgccgtt cgcgctgcgc cagaaacatg ctgattttcc
     6781 cggtcgcacg ttcgatgcca atccccggtc cgtcataata aaagcccgaa atttcagcct
     6841 gcgggaagcg atcgctgacc accagaacgc cactttgcgc cagtcgctga accttgcgta
     6901 gattcgccat tcttcgcagc gagaagcagt acataatcac cgccgcccat agcgccggag
     6961 atttggtttt catgctttgg gttttcgagg atttggccgc cagtcgccgt tccagccaga
     7021 cgccaaccaa cggcaatcgt ttgattttgt cgccgtcttc gccggagagc agccccagat
     7081 agcgccgctc ggtttgccag tgttgttgca gcgatttcac taggtcggtg gtcagtgtgg
     7141 atttaccggt gccatcacac ccgaccaccg caatcagccc cggaatgtag ttgggctgcg
     7201 gcgcggttgt actaataaca gtttgtgttt gtagtgcatc cattcgttaa atcatcccct
     7261 atccattttg gtgatcagga aagcgcggcg tgaattgcgc gtagtgacgc ttgcagaatt
     7321 tcatcggctg gttgccgacc atccagttca aggatctttg cgccattgaa tgtcaattgc
     7381 ggcgtaacgg cgattttttc ctgtaacgct gccagttggt ggtcaggttt acgcgcaaac
     7441 gcggtttgtt catcaatgcc aagacgaatc aacaatacgg gcaaataaga cgccatccat
     7501 tggtacagct tcagctcgcg ctgccttaac atttttatcc aaccgttacc gcccgtggtt
     7561 tttgccaatt gcgggccatc aaagcgaaac cccggcactt caacctgcgg gtagcggtcg
     7621 gtgatgagca gaaagccttg ctggctttta cacaacattt tgcgaaactt gtacgcccgc
     7681 cagcaggaaa gcagatagat aaccagtgca gtaatattgc caagcggtgt tgagggcttt
     7741 tcgtgcacat gtgccgcttt acttcgcaaa taacgcccaa aaggtgcgcc aataacaggg
     7801 agctgtgaaa tccattcgcc aattcgcccg gacgattgcc cgagataaat gtgttctgct
     7861 ggcattcttg ctgccagttc atttaccagg cttgccgtga gggtcgattt acctgaacca
     7921 tcacatccta caatggcaat aacacgcact ggcgtggaat taattattga catattacgt
     7981 tgattcacga aaaacccggc agcaaataat gtattgaata ttacgtggtc cgtgctcaga
     8041 atatccgttc acccttattg tgacaatggt taattgtgac attgacctga attacgcttt
     8101 cataaaaaca tattaaccaa ataaatattt ttaatggata tttaaattaa aggatatatt
     8161 catgcagtca ataacacctc cattaattgc cgttattggt agcgatggtt caggcaagtc
     8221 aacggtgtgt gaacatctca ttaccgttgt cgaaaaatat ggcgccgcag aaagagttca
     8281 tctcggaaaa caagccggaa atgtcggtcg tgcagtggta aaactgccct taatgggaaa
     8341 atcgcttaat aaatctattg aacgcaataa agtgaaaaca gcgaaaaaat tgcctgggcc
     8401 agttccggcg ctggtaatta cagcgtttgt cgcccgccgc ttactgcgct ttcgtcatat
     8461 gcttgcctgt cgtcgtcgcg ggttaattgt tttaaccgac cgttatccgc aggaccagat
     8521 tcctggcgct tacgatggta cggtgttccc acctaacgtt gaaggtggtc gttttgtctc
     8581 atggctggca agtcaggaac gtaaagcatt tcactagatg gcgagccata agcctgatct
     8641 ggtcatcaaa ctcaatgtct ccctggacgt ggcctgcgcg cgtaagcctg accacaaaag
     8701 ggaatcgctg gaaaggaaga tagccataac gccacagtta acctttggag gcgcgcaact
     8761 ggttgatatc gatgccaatc aaccgctgga acaagtgctg gttgatgcgg aaaaagcgat
     8821 aatggatttc atgacagcgc gaggttatca ctagtcagaa gtgataatgc ccgatcgcag
     8881 gaccgggcat taacaggaag gttagataag ctgcaatgca atccagtaca gactaccaga
     8941 cagaaaaatt gccgccggta aggtaaacac ccacgccatc aggatactgg ttaccgtttt
     9001 acgctgtaac ccaccgccgt ccaccaccat cgtccccgcc accgcagaag agagtacgtg
     9061 agttgtggaa acaggcatcc caatatagct ggcaagaccg attgataccg ccgccgtcat
     9121 ctgcgccgcc atcccttgcg catacgtcat gccgcgctta ccaattttct caccgatggt
     9181 catcgctaca cggcgccagc caatcatggt gcctataccc aacgccagtg ctaccgccat
     9241 gatgatccac accggagcgt actcaatggt gcttaacata tcgctgcgaa gttttttcag
     9301 caggttctgg tcttctttac tgacgcctgg cagtttcgcc agcttcgcgg aggtatcaga
     9361 gatgcacagc ataatgcggc gcagctggct gcgctgactc acgcttaacg gctcgtaact
     9421 ttccatattg cctggcagca tcgttttaac gcgcgcaatc gcatcaaagg tatttgccgg
     9481 atgacagtga aactccgtca cttgcgcgcc atcagtagat gccgcaggca atggaggttc
     9541 catcgtaatc aacttctgcg gcagttcagg atgctgttgc aggtagtgtt cgaagttggt
     9601 gacggcatcg cgggtacggg taatttcata gccggacgcg ttcatattga cgacgaagcc
     9661 agcaggggca atccccacca gtaccagcat caccaggccg atccctttct gtccgtcgtt
     9721 cgcgccgtgc gaaaacgcca cgcccgcagc ggaaacaatc agcgcaatac gcgtccagaa
     9781 tggcggctta cgtttgcctt ttttcttttt gcgatcttcc ggaatgcggt gaatacggtc
     9841 acgctttttc gtcccgctcc agtagcgtcg cagcaggaat atcaggcctc ccgcaatgac
     9901 caagccgacg ataggggaaa caaagcgagg agaaaatttt ggtcacttca cgcaggttta
     9961 acgcatccat caccgatgag ccggttaaca gcgcgttggt taaaccaatg ccgataatcg
    10021 caccaatcaa ggtgtgcgaa ctggaggccg gtaaaccgaa gaaccacgtt cccaggttcc
    10081 agataatcgc cgccagcagc atggaaaaga ccatcgccag gccgtgggtt gaccccatat
    10141 tcagcaacaa atcggttggc aacatatgga caatggcata ggcaacgcta agtccgccca
    10201 ataacacgcc aaaaaagtta aaaaatgccg ccatcaccac agcaagttgt ggttgcatgg
    10261 cacgagtata aataacggtt gccaccgcat tcgccgtgtc atgaaaacca ttgattgctt
    10321 cgtagaacaa cacaaatgcc agagcaagta ataacaaaag ccctgtgtat atatcaaggc
    10381 caacaaataa atttagcata tattagatta cgccattttg aatttacgaa cggacgcatt
    10441 atcagtgaat ttaacggtgt gggcaaagtg aaatatcatt ttttaacgat aaaaagagtg
    10501 ttatttcttg tgtatcagac aataagcatt cattaaaaat ctttagaaat aattagaaca
    10561 caggcattct gctggttaat gcattcacat atgaaatgaa taaatatttg aatatataaa
    10621 tattgaatat tttgattaat ccccgtactg actattcttc ataatcagta cgggattgct
    10681 acaacatgta ttactctttc accacaatta acggttcaat atcactctct tttttaataa
    10741 ccagtgattc atcaccgcgc aaacacgtcc caccgtagtt gccgccaacg gtgaaggtac
    10801 atacctgaat gtatttaccg tccactttcg gcaaacacca cagttgctga tagatgtttt
    10861 tctgctcggc aaatttaccg ctggttttgt ccagcacctc ttcatgatgg ctgaccaggt
    10921 cgatattgct accacagcga ccggcaatcg gtttcactgc gtaacctgtt ttcaccaatt
    10981 catcattaac agtgaaatcg gtatccagca ggtaacgatg gtgcgggaac agcgaccaga
    11041 ggatcggcag aatcgctttg ttgccgggaa tcaccgtcca cagcggctca aagaccagca
    11101 cttccgggcg cagcaatacg tcgataagac gcacttcgtt ttgcggatga ccggtacgga
    11161 ttggcaccgc agcaaactca cggtcgctaa cttcacgaat ctgatcaaac gcggtttccc
    11221 acgcccaggt tttccacacg cagttaacca gtcgcccttc cccatcaatc agttgcccgg
    11281 cagcatccca gcccagttca tccagcccgc gcaagatacg cgtttcaaag cccgcctggt
    11341 gcagcgcctg ctccataaac tgcgcgtgat agttttcctc gatatctttg tcctgcatga
    11401 tatggacaaa cggacgtgca cgactgtgtt tccaggcacc agccagttcg ttaatcagcc
    11461 cttccgccgg attgaagccg ttgcctttat agccctgctc cgcccaacgt tcgaggatca
    11521 agcccgcttc ggtatgacat gaggcggagt cggcgttgta ctcgtaaacc ttcagaccac
    11581 gctcatccat gcagaaatcc atacgaccgg tgatcatatg gtgacggcga cgctgccagg
    11641 agagacgcaa acgtggccag aggattttcg ggatgtcgaa cagcgccagc aggttgtcat
    11701 ctttcagcac cttgtcggtt gcgtgaagat acatcaggtg cagctcgttg gtggctttaa
    11761 ttagctcctg ctcggcactc tcggtaatgg tgtagtaatg atacggatcc tgattgatca
    11821 cctgaccgtt ggcctgcaca taggcgtttt gtagcggatc tttttcatcc agccatttac
    11881 cgtcaaactg gcctttgttt tccaggcgcg ctccgctgat tttcagcagc tcgcctgtaa
    11941 tttccggctg cggtaagctg tattcagtat cttccgtctg gatcatccag cccagaatgg
    12001 tggtgtcatc aaaagtgtct ttaagggtat agcagccgtt ttcgaccacc atctccagct
    12061 cgcgcgtcca ctgttgccct tgcggcaatg gggaatgaat cacgttctgt tccgcaatac
    12121 ggactttgtt gccatgcaat tgggtaatga tggcgacatg gccagtgtct ttaaattcac
    12181 cgcctttatc ccagataaga agcgcacccg cgaccggcgc acgcggcgag ccgttaggaa
    12241 atgcctgcaa tggcaggatg ttgtcattaa ccacttctcg caggaagcgc agcgagaaaa
    12301 tctcccacgc catacccacg tcagtaaaga ccacaccgta attcagaaag agaaaacggc
    12361 gagcaaattc aacgcattgc cacttgtggc ccatatattc gtcgtcgata tagctacgga
    12421 atacggcgtc atcttcgtat tcctgcggat cgagagaact gtaatctgaa gagtagattg
    12481 ctaccccacc tggggcgtag cccaataatg tcccgaacgg ggcatcctgg ctggtcgttc
    12541 ctttgctcat cactttacct ttaacaatac aacctaagca gttggcgtaa ttgttgtgct
    12601 ctgattacct gctcagcgac attaaccgga cagaggtcag actaatcata cacctcatcg
    12661 cagcggctgg cgcaaagggt taaaaaattc acattctgta cagcaagtga cctgctacac
    12721 tgcttcaaca ctaccactca gaaggcaact cactatgaca gacaatactt atcagcccgc
    12781 gaaagtctgg acgtggcata aatccgctgg cggcgcgttc gccaatatca atcgcccggt
    12841 ttctggtccg acgcatgaaa aaacgctgcc cgttggcaaa catccattgc aactttattc
    12901 gctgggaacg ccgaacggtc agaaagtaac gattatgctt gaggagctgc tggcgctggg
    12961 cgttactggt gcagagtacg acgcctggct gattcgtatt ggcgatggcg atcaattctc
    13021 cagcggcttt gtcgaagtga acccaaactc gaagatcccg gcgctgcgcg atcatacgca
    13081 taatccgccg atccgcgtgt ttgaatctgg ttcgatcctg ctttatctgg cggagaaatt
    13141 tggctacttt ctgccgcagg atttggcaaa gcgtactgaa acgatgaact ggctgttctg
    13201 gttacagggc gcggcaccgt tcctcggcgg tggttttggt cacttttacc attacgcgcc
    13261 ggtgaaaatt gaatacgcca tcaaccgctt taccatggaa gccaagcgcc tgctcgatgt
    13321 gctggataag caactggcgc agcataagtt tgtcgcgggc gatgagtaca ccattgcaga
    13381 tatggcgatt tggccgtggt ttggcaacgt ggtgttaggt ggtgtgtatg atgccgctga
    13441 gtttcttgat gcgggcagtt ataagcatgt acaacgctgg gcgaaagaag taggcgaacg
    13501 tccggcggtg aaacgtgggc gtattgttaa ccgcaccaac ggaccgctga atgagcagtt
    13561 gcatgagcgc catgacgcca gtgatttcga gacgaatacg gaagataagc gtcaggggta
    13621 agggttggtg ttcgtcgcag caagccatcc aggccggata aggcgttcac gccgcatccg
    13681 gcaatcgtgc acaatgcctg atgcgacgct gtcgcgtctt atcaggccta cgaaagctaa
    13741 tcatcacgcg ctggtaatgt cgtaatccat ttggcgcagt gcgtctaatg tggctttggc
    13801 ttcatcttcg tcgatgatgc tcatggcaaa tccgacgtgt accagcaccc actggcccag
    13861 cagatcggca gggttacctt cacaaatcag ggcgatattc acgtcgcgct tgataccaca
    13921 tacttcaacc tgcgcaagct ggtgaatatc ttcaccgaca gccagcacct ggcctggaac
    13981 gccaatacac attgttaact ccggttattt cgattgccgg acaaacgcga aaaagaacct
    14041 ttagcgggtg ttccctctca ccctaaccct ctccccggag gggcgagggg accgtccgtg
    14101 cgcttttcag gcgttgtcct cagtcttatt caacttcaat acttttgacg atcagcgaat
    14161 cgccggtatc gacacgcaac cgctcgccat gacagagcgg acactgcgca tcgtgctgat
    14221 gaatctccac cacctggctg caatcccagc accaggcctg ggcgggttta tagacgatat
    14281 gtaaatcgca cccttgcgcc accgttccgt ggcagacaat ttcaaaacta aaacggacgg
    14341 cgctctcctc aacgcaggag agcgcgccaa tttccagcca cacggcggtg acgcgcttaa
    14401 catcgtgctg ctccgcctgc cgttggataa tttcaacggc gctctggcaa agcgacaact
    14461 catgcatttt cgccactcct gcgaccaaac agcagggcgc gacgccctgc gtgtggtaca
    14521 tccggattgg tgactggcaa cgaaaggatc attcgtgcgc agtcatccgt caggcgttgg
    14581 ccttcttcaa tcgacatgct gtgcgaaagc ggcgacatca gcgaacagga gaggtattgc
    14641 gaaacaccgt ccagttcgcc aacggtaaag gtcatggtgc catacggcag ttgcagacca
    14701 attttttcac tcactttgcg cagcggccag agttgatccg ggccggggaa gataactgca
    14761 ctcagcatcc acggggtgat cacacacccc gtccactgac cttcgaacag cgtaaaatca
    14821 gaaacataca ccggcattga aggatgcaga aaagagagat cgtgcatcga acgccgggca
    14881 atttcttcaa aagctgcctg tacttgcgcc ttcggggagg tctggaaacc tgctatctct
    14941 tcagtcatga atcgcctccc gtgggatggc ttccacgcca gattcacgca gcgcagccag
    15001 aacctgctca agcgcaggtt caatcatcgc ttcgaccgtc ggcgtcaagc cgatgtgcgg
    15061 ctccagtgat tccggaatta cgccgaccag ggtcagcttt ttcggaaact caccggtgaa
    15121 gcgcagggcc gacaatacgt cggccaggcc aagctgatgc ggagagattt tgttggtaaa
    15181 caacgccgga acttcttcat cccgcaggat catcatcgtt cccggcgtgt tctttttcga
    15241 cacaatggca tccgcaataa tcagatgatc gcgatttgcc atgtcgccaa gcagctccat
    15301 tcccgccgtg ccgccatcga ggatctcaac ataatccggc agaatgtatc gttgctctaa
    15361 cgcttcgaca atccgcacac cgatggcttc atcggtcagc aaaatattgc cgacccctaa
    15421 gactaaaata cgcattacag aaccttcact gaaaccactt cgttgccgtc agcatccact
    15481 acgtgtaccg cacaggccat gcacgggtcg aaggagtgaa tggtacgcac cacttccagc
    15541 ggtttattcg gatcggcaac cggtgtaccc accagcgact gctcgtaagg accgacgtca
    15601 tcattgaagt tacgcggacc agagttccaa gttgatggaa caaccgcctg gtagttgctg
    15661 atgataccgt ctttaataac catccagtga gagagcatac cgcgcggcgc ttcgaggaag
    15721 ccaacacctt tgaactcacc cgttgccgga atgttcggtt tcacaaaggt ggtgtgatcg
    15781 cctttgccga tattggtgat cagtgcactg tattggtttt gcaggatatc ctgcaattca
    15841 cagcagtgaa cggtacgacc aataatacgg cccagcgtgg agtgcaactg tgccacttcc
    15901 agcgtgttgc cagtcagttt ctgataaatc gcaacgattt cattcagttt gttctgggta
    15961 gattcgcgac ctgccgccag tttcaccagc atattagcca gcggacccac ttctaccgtt
    16021 ttgccgtaga aagtcggtga tttcacccag gaatatttcc cgtcgtcaga ccaaccatca
    16081 taagccggaa tggtggtacc ttcccacggt gcctgcggcg cttcgtcttt ataccaggag
    16141 tgcttcgcgc tttcctgaat gcctttgatc aggtattcat cggaatgtga agtgatcgga
    16201 cgatacgagg acagatccgc attctcaatg taaccgcccg ggaacaggaa gctgccgttt
    16261 ttactgtcgg tcgggaattc cggcacgctc aggtagttca ccgcaccttt accgcacgtc
    16321 agccattccg ggtagaacgc ggcaataact gcggtatcaa ccttataaac ctgttcaaca
    16381 aagtcgctca acttgtcgat gaaagacttg atgtacatca ggcgctcaag gttcagcacg
    16441 cccaaaccgt cgaggttgat cgggttcgcg acaccaccta ccgccaggtt ctgaatgtgc
    16501 ggcgttttac cgcccagcag cgccacgacg cggttagcgt cacgctggca ctccagcgcc
    16561 tgcaggtagt gcgctaccgc aatcaggttc acttccggcg gcagtttcat cgccgggtga
    16621 ccccagtagc cattggcgaa aatacccaac tgaccgctgg caaccagatc tttgatcttg
    16681 ttctgaactt tagtgaactc ttccggactg ttcagatgcc aggtcgaaac gcctttcagc
    16741 atttcggagg ctttggttgg gtcagcttgc agtgcagaag tgatgtccac ccagtccagc
    16801 gccgaaagct gatagaaatg aacgatatgg tcatgcgtgg tgtgcgcagc cagaatgatg
    16861 ttacggatgt attgcgcgtt aaccggaacg tcgatattca gagcactttc tgccgcacga
    16921 acggaagaca gcgcgtgagt ggtagtacat acgccacaga tacgttgcac aatcatccat
    16981 gcatcgcgcg gatcgcggtt tttcacgatc tcttccatgc cgcgccacat ggtaccggaa
    17041 gcccatgctt tcgaaacgac gccattttcg atttcgcaat cgatgcgtaa atgcccctca
    17101 atacgggtta ccggatcaat agtaattctc tggctcatgc tttgctcgcc tcatgacgat
    17161 tatgatcgtt ttgttttaaa ggaggaagta tcggcagtag acgaatgagt acgatgtaag
    17221 cgcaaatctc aatagccaca aaaccaatag aaatcaacag ttcttcccag gtcgggaagt
    17281 aggcgtaacc gccgcccggg ttgaatgcca ccagcgaata ggtcagacgc caggttgcac
    17341 aacctaacag tgcgctcagt gctgacagga acagcatgcg ggaatcatta cgcagcttcg
    17401 ccacacgcag aacgaccagc gggaagagca tcagcaggac ttcaatccag aacatcacgg
    17461 agtagaagtc accggcaaac gctaacgaca gcttgtcgcg atagataagc tcgccaaagc
    17521 gcagcacgat gaaaatcgcc agcaacacac tgatggtgtt ggtcagcttg acgaacagac
    17581 tcttttcatc cgaaccgttg ccacgcagac ccgcctgcac cagcgaacct tcaaagatga
    17641 caatcgagaa gcccatgatg aacgccgtca gcagcgagaa cagcggcaac atttcatagc
    17701 tctgccacag cggatgcacc ttgtagcccg ccgagatcat cagcgacccc attgaagact
    17761 ggtgcatggt cggcagcagc gcaccgagcg cgatgatgaa gaacatcacc ttgttcagac
    17821 gctgtagcga caccttccag cccagacgtt caaacagtgc cggagcaaac tccagagcca
    17881 tcacgccgat gtagatggtc atacagaccg ccgtctcgaa cagtaccgag ttcacgttga
    17941 agtgacccgg aatgtagaag tacggcaggt tccagtagcg acccacgtcg atagtgatcg
    18001 acaaaccacc cagtgagtaa ccaaacagac tcgccaacag cgccggacgc accagcggat
    18061 ggtattgccc acggttaaag acgtataccg cccacgccag cgcccagccg ccacaggcaa
    18121 agccggtgcc aatcagcagg tcaaacgcga tccacacgcc ccacgggaag ccgccgttca
    18181 ggtcagagac agagcccaga ccgaacacca gacgcttcac aatcaggagc atacagatga
    18241 cgattaacgg tccaaaaatc atgaccggtt tactgatgat tttgccgccc agcggttgtg
    18301 gatcatgact catgatcgtc tcctccgtcg tgatggtcgt ttttggtgtt gcgacgaacc
    18361 agcacggtta agcccgccag cacagccagt ggtagcatca tgcctttata cagggtgtgt
    18421 tgaatatttt cggaacgcgc accggtagaa agatcgtcca gtttcggcag gtcgagattt
    18481 tcataaggca cacccgtcag taccagaacc tgagtaccgc cgccctcttt ctcgccgtac
    18541 agatgcggat aatatttcgg caccgtatgc aggtaagtgt cgccagattt cagcgtctga
    18601 cgcggatagt ggtattcgct gcccggcttc agctccagac gttttttcgc ctccgccatc
    18661 agctcttcac gcgtaccaaa aatcaccgcg cccgccgggc acacttctac gcagccaggc
    18721 agaccgcctt tatcgaggcg ctccacacct ttctggttgc acagctcgca cttatgcagc
    18781 gcaccaaacg ggttgttgta gtcgtacttc ggcacattgt atgggcaggc gaccatgcag
    18841 taacggcaac cggtgcacac atctttgtcg taatggacaa tgccggtttt cggatctttt
    18901 ttcagtgcag aaaccgggca cacagagaca cagttcggat cgacgcagtg catacactgt
    18961 ttcttaatgt acgcgtagcc gttctcctcc tggtctttgt tgacccccgt gccgctggtc
    19021 cacacctgaa tgatgttatt ggtatacggc gacagtttgt cgttgttcga ccaggtctgt
    19081 tccccttgcg ggttacgttc agggaaattg atatcctgac acttggtgac gcaagcctgg
    19141 cagcctacgc acaaggtcga gtcgtacaac atccccagcg atcccggaat tggcgggcgg
    19201 ttttcagcag ccgcatgact gacagacggc agcgcccccg tcagcaatgc cccgcgggag
    19261 gctgctttaa taaaattacg tctgttcacg gttattctcc ccgtgagtca gcgttatctt
    19321 tcttttgctg acgacccagt tcacgcaccg ccatcacgct gacaccggca accagcccaa
    19381 ccacaccgcc gagcaaacca atagcgcctg cagagacgtt gccgccctct ttagcgttaa
    19441 catccggttt ctgtgaacgc ggagtctgat tttcgacgtt ggcaagctga tggatgcctt
    19501 tatggaagcc gataccttct tcgttacagc catagcacgg gtgaccaatc gccaccggcc
    19561 acacaccgcc aacatcgcag aattgcagcg ttgagcagtt gccgtaagtt tctggccctt
    19621 tacagccgag gtggtacagg caccagcctt cgcggtggcc ttcatcaccg aactctttgg
    19681 caaaacgacc agcatcgaag tgcgggcgac gttcgcagtg ttcgtgaatc agacggccat
    19741 aggcgaaggt cggacggttt ttgtcatcca gtttcggcgg tttgccgtaa gtgatgatgt
    19801 gcgcaacggt cgcgaggaag ttgtgcgggt tcggcgggca gcccggaata ttgataacgg
    19861 ttttgcctgg cagaacttct tgcaggctga ctgcgccagt tgggttaact ccagctgcgg
    19921 caacaccgcc ccacgcagag caggaaccga tagcgataat cgctgctgcg ccttctgccg
    19981 ctttgcggat gtgatccaca atcggctcac cagcaaccat gcaataaata ccgttatctt
    20041 ttaatgggat ggaaccatcc acaaccaaca catactgccc tttgtacttc tcaagtgcgt
    20101 tatgtttgtt ctcttcgacc tgatgaccga aggcggcgga aagcacttcg tgatactcca
    20161 gagagatagt ctccagcacg aggttttcta ccgttggatg cgttgcacga agcagagatt
    20221 ccgtacaacc ggtgcactcc tgcgcgccaa tccagataac tggcggacgc tgcgggttag
    20281 taaccgattc ggccatctct gcagcggctt tgctacttaa ccccatggtg gcggctaatg
    20341 ctgcacaaag cttcatgaaa tcacgacggt taatgccgtg agaatggatg agggtgttat
    20401 ctccagtcat ttatagttat tccgttgcga agacctggca tatattttgt ctcaatcgca
    20461 aaatcaataa tgcgatcgat gcgccattta ccacacattt attatggtta tcgatatcat
    20521 gatactgcgg cggggcgcta aaacgaaggg aagaagcatt agtgtaatta attaaagcaa
    20581 gataatacgt atgtttgatc aattttcgag gcgataaccg gccataaaaa agcgcaacgt
    20641 agaacaggaa ttattctcac gaaagaaatc cattaccatc tctttatcca gtccatagcg
    20701 gcgcgtcaga atacccgctt cccaggcgct aagctggcga tctccggtct tttcgtacat
    20761 ccggtgtgag tagcctaata caaaaccgcg tttataatcg gcacagaatt ttgtcacatt
    20821 aaccgcactg tcggcatgcg ttgcttttaa tcccgccatt aagcctttac caaaatggtt
    20881 attcatcgtt cacctcattc gctatatatt gtcatatata gcgatatttt aggcaaagaa
    20941 cgacttttgc gcacgctatt ttttcatgct tgtttaagac gtaatcccgt aagagataaa
    21001 cctatcagga gagatattta tcgaaccatt tcagtgtcct ttgccaggca agatcggcgg
    21061 cagatttgtc ataacggggc gtggaatcat tatggaatcc gtgattaacc cccggataga
    21121 tatacgcctc ataaacctta ttattggctt tcaacaccgc ctcgtaagca ggccagccct
    21181 cgttgattcg ggtgtccagt tccgcgaagt ggagtagtaa aggcgcttca atcttcgcca
    21241 catcggcagt gggtgcctga cgaccataaa acggcaccgc gcaggccagt tccggatacg
    21301 cgacagccgc cgcgttcgat acgccaccgc catagcaaaa tccggtaata cccactttgc
    21361 ctgtcgcttg cggatagcgt tgcataaact caattgcggc aaagaaatca ttcatcagtt
    21421 tggttggatc aacctgctgt tgcagctcac gacctttatc atcatttccc ggataacctc
    21481 caacggaact taagccgtca ggtgccaggg cgatataccc cgccttcgcc actcgccgtg
    21541 ccacatcttc gatatacgga ttcagtccac gattctcatg caccaccacc acggctggcg
    21601 ttttgccgct catttttgcg ggtttcacca gataaccccg tacctcgccg tgaccatttg
    21661 gcgaaggata cgtgatgtac tcagcaacaa tctccgggtc ggtaaactct acctgagtcg
    21721 ccagcgcata atttggcttg agcaaatcaa acaacgctaa tgccgtcatc ccgcccaccg
    21781 catacttcgc cgcaaggttg aggaactcac gtttcgaaat tttcccgtga gcgtaatagt
    21841 cgtagtaatc caacaactct tgtgggaaat ctttggcggt taaacgcggc atcgttgcat
    21901 tcctcaactg gtgttttttt aagcaaagca taagcgcgtg tttttgccca gtttttcgtc
    21961 actctgtgag ccagactacg ggatacgcgc tggcgaatcg ctaaactaga aacattgttt
    22021 cgaaattgaa cggtggaaag gagaggtcat ggtctggtta gcgaatcccg aacgttacgg
    22081 gcagatgcag taccgctatt gcggaaaaag tggtttacgc ctgcccgcgt tatcgctcgg
    22141 tttatggcac aatttcggtc acgttaacgc gctggaatca cagcgtgcaa tcctgcgtaa
    22201 agcgtttgat ttaggcatta cgcactttga tttagccaac aattacgggc cgcctccagg
    22261 aagcgcagaa gagaactttg gtcgcctgct gcgcgaggat tttgccgctt atcgcgatga
    22321 actgattatc tctaccaagg ctggctacga tatgtggccc ggcccgtacg gctctggcgg
    22381 ttcacgtaaa tacctgctcg ccagcctcga ccaaagcctg aagcgtatgg ggcttgagta
    22441 tgtcgatatc ttttactctc atcgcgtcga tgaaaatacg ccgatggaag aaaccgcctc
    22501 tgcgctggct catgcggtac aaagcggtaa ggcgctgtat gtcgggatct cctcttactc
    22561 gccagagcgg acgcaaaaaa tggtcgagtt gctgcacgag tggaaaattc cgctgttaat
    22621 tcatcaacct tcgtacaatt tactaaaccg ctgggtggat aaaagcggcc tgctggatac
    22681 cctgcaaaat aacggcgtgg gctgcattgc ctttactcct ctggctcagg gattgctgac
    22741 cggaaaatat ctcaacggca ttcctgaaga ttcacggatg catcgtgaag ggaataaagt
    22801 tcgtggcctg acgccgaaaa tgctcaccga agccaacctc aacagcctgc gcttattgaa
    22861 tgaaatggca cagcagcgtg gacaatcaat ggcgcaaatg gcgttaagct ggttgctgaa
    22921 agatgatcgc gtgacgtcgg tattgattgg tgccagccgc gcggagcaac ttgaggagaa
    22981 cgtgcaggcg ctgaataatc tgacatttag caccgaggag ctggcgcaga ttgatcagca
    23041 tatcgccgat ggcgagctga atctgtggca ggcgtcgtcc gataaatgac ctgttaataa
    23101 cgggcgcgcg aaccgcgccc gaatcagatc agtgattatg acgagtcagt cggtcaagat
    23161 agcccatcac aaatgcagag agcacaaacg tcagatggat aatgacgtac cacatcagtt
    23221 tgttatcagg gacatttttc gcatccataa agacgcgcag taagtgaatg gaagaaattg
    23281 ccacaatcga cgctgctact ttgtttttca gcgacgttgc gtccattttc cccagccagt
    23341 tcagcttctc tttgttctcg gagatatcca gctgcgagac gaaattctca taaccggaaa
    23401 acatcaccat caccagcaaa ccgccaacca gcatcatatc caccagcgac agcaacacga
    23461 ggatcaaatc tgattccgcc atcgagaaga tattcggcag tacgtgaata atctcttgga
    23521 agaacttcag cgccagggca actaacgcca gcgaaaggcc aaagtacacg ggggcaagca
    23581 gccagcgaga agcatacatt gcattttcaa gaaaacgttc catacattcc tgtcgtgtag
    23641 ttaaaacggg caacagtata tcgcaattga gtaaacagca cgcaacagca aatcaacata
    23701 tacgttaaac ctttgtcgca taattctgag gtttagggat cttcctggtt cccttatcaa
    23761 cgcatcgaga gcgtctaccc ttaaaagacg ttgaacctga agggagaaaa acaatgtctc
    23821 atttaaaaga cccgactacg cagtattaca ctggtgaata tcccaaacag aaacaaccga
    23881 cgccaagcat ccaggcgaag atgacaccgg taccggattg cggcgagaaa acctatgttg
    23941 gtagcggtcg cctgaaagat cgtaaagcac tggtgacagg gggcgattcc ggaatcggtc
    24001 gcgctgccgc catctcttac gcgcgtgaag gggctgacgt ggcgatcagt tatcttcccg
    24061 tggaagaaga agacgcccag gatgtgaaaa agatcattga agaatgcggt cgcaaagccg
    24121 ttctgctgcc aggcgattta agcgatgaga aattcgcccg ttcgctggtt cacgaagcgc
    24181 acaaggcgtt aggcgggctg gatattatgg cgctggtcgc cgggaaacag gttgccattc
    24241 ctgatattgc agacctcacc agcgaacagt ttcaaaagac ctttgccatt aacgttttcg
    24301 cgctgttctg gctaacccag gaagcgatcc ccctgctacc gaaaggtgca agtattatca
    24361 ccacttcgtc aatccaggca taccagccaa gtccgcattt actggactat gcggctacga
    24421 aggcggcgat tctgaactac agccgtggcc tagcaaaaca ggtcgcggag aaaggtattc
    24481 gggtgaatat tgtcgtgcca ggcccgatct ggacagcact gcaaatttct ggcggacaaa
    24541 cgcaggataa gatcccgcag tttggtcagc aaacgccgat gaaacgtgcg gggcaaccgg
    24601 cggaactggc ccctgtatat gtttatctgg caagtcagga gtcgagctac gtcaccgcag
    24661 aagtgcacgg tgtgtgtggc ggcgagcatt taggttaaaa aaatgcccgg ttgtgaaaag
    24721 caaccgggca tcattgtgaa ttcactctta cctgatgtgg cgaaaacgcc ttatccgcct
    24781 acaaacgcat gaagattcaa catgttgcaa tagattttgt aggcctgatg agcgtagcgc
    24841 atcaggcaat tctactttac ttcgctttgg cggtttcttc gccgaccaga cctatcttca
    24901 ggtaacccgc ctgatgcagc gtatccatta ccttcatcaa cgtctcgtaa tcgacggttt
    24961 tatccgcacg gaagaagatg gtggtgtctt tcttaccttc ggttaccgca ttcagcgccg
    25021 taatcattgt ttcatcggtg accggatcgt taccgataaa catcgagttg tctgccttca
    25081 ccgacagata aaccggtttt tccgggcgcg gctgcggcgt gctggtagaa gcaggcaaat
    25141 tcaccttcac atctaccgtc gctaacggtg ccgccaccat aaagataatc agcagaacca
    25201 acatcacgtc gataaacggc gtcacgttga tatcatgcat ttcgccatta tcatcgaggt
    25261 tttcgttaag atgcattgcc atcggacatt atcctgcgcg taatttttgt gcgacacgaa
    25321 ccggatgcgc agcggcgctg gcttccagat ccaggtcacg gctttgcagc aacaatacct
    25381 gcgctgcaac atcacccagc atcgctttaa agccgccaat ctggcgtgca aatacgttat
    25441 agataacgac cgcaggaatc gctgccacga ggccgattgc cgttgctaac agagcttctg
    25501 cgatacccgg cgcaacgact gccaggttag tggtctgcgt ttgcgcgata ccaataaagc
    25561 tgttcatgat gccccagacc gtaccaaaca gaccaacgaa cggagaaatc gcgccgatgg
    25621 ttgccagata gccgttaccg cggcccattt gacgacctac tgcggcgacc cgacgctcca
    25681 gacggaagct ggtacgttct ttaatacctt cgttatcgtc gctgccttct gacagttcca
    25741 gctcattctg cgcttcattg agcaaatgca ggcttaagct tttgctacca aaatcagcgg
    25801 cgatatcgtt ggcctggttt aaggaacgcg cttcagccag cagttgctgc tcgcgcttaa
    25861 ggcgacgctt ctgattgaag aactctacgc tcttactgaa gaagattgcc caggtgacta
    25921 cggaggccaa aataagccca atcatcacgc acttaacgac aatatcggcg tgctgataca
    25981 taccccagac ggaaaggtcc gtctgcatta aattattacc cactgtgtat ctccaggacg
    26041 caagtcacaa aatctgcgca taataatatc aaaacgacgt cgaattgata gtcgttctca
    26101 ttaccatttg catactgccg tacctttgct ttcttttcct tgcgtttacg cagtaaaaaa
    26161 gtcaccagca cgccatttgc gaaaattttc tgctttatgc caattcttca ggatgcgccc
    26221 gcgaatattc atgctagttt agacatccag acgtataaaa acaggagtcc cgacatggcg
    26281 gacaaaaagc ttgatactca actggtgaat gcaggacgca gcaaaaaata cactctcggc
    26341 gcggtaaata gcgtgattca gcgcgcttct tcgctggtat ttgacagtat ggaagccaaa
    26401 aagcacgcga cgcgcaatcg cgccaatggc gagttgttct atggacggcg cggaacgtta
    26461 acccattttt ccttacaaca agcgatgtgt gaactggaag gtggcgcagg ctgcgtgcta
    26521 tttccctgcg gggcggcagc ggttactaat tccattcttg cttttgtcga acagggcgat
    26581 catgtgttga tgaccaacac cgcctatgaa ccgagtcagg atttctgtag caaaatcctc
    26641 agtaaactgg gcgtaacgac atcgtggttt gatccgctga ttggtgccga tatcgttaag
    26701 catctgcagc caaacactaa aatcgtgttt ctggaatcgc caggctccat caccatggaa
    26761 gtccacgacg ttccggcgat tgttgccgcc gtacgcagtg tggtcccgga tgccatcatt
    26821 atgatcgaca acacctgggc ggccggagtg ctgtttaagg cgctggattt tggcatcgat
    26881 gtttccattc aggccgccac caaatatctg gttgggcatt cagatgcgat gattggcact
    26941 gccgtgtgca atgcccgttg ctgggagcag ctacgggaaa acgcctatct gatgggccag
    27001 atggtcgatg ccgataccgc ctacatgacc agtcgtggcc tgcgtacatt aggtgtgcgt
    27061 ttgcgtcaac atcatgaaag cagtctgaaa gtggctgaat ggctggcaga acatccgcaa
    27121 gtagcgcgag ttaaccaccc tgctctgcct ggcagtaaag gacacgaatt ctggaaacga
    27181 gactttacag gcagcagcgg gctattttcc tttgtgctta agaaaaaact caatgatgaa
    27241 gagctggcga actatctgga taacttcagt ttattcagca tggcctactc gtggggcggg
    27301 tatgaatcgt tgatcctggc aaatcaacca gaacatatcg ccgccattcg cccacaaggc
    27361 gagatcgatt ttagcgggac cttgattcgc ctgcatattg gtctggaaga tgtcgacgat
    27421 ctgattgccg atctggacgc cggttttgcg cggattgtat aacattgcca cttttggaca
    27481 attttgcaga cattttattg tgaaaagtct taaattgttg cgtccgggat caaggcgtcc
    27541 cggacgattc aggagtacaa taggcagata aaggcttaaa cgctgttcca caggaaagtc
    27601 catggctgtt attcaagata tcatcgctgc gctctggcaa cacgactttg ccgcgctggc
    27661 ggatcctcat attgttagcg ttgtttactt tgtcatgttt gccacgctgt ttttagaaaa
    27721 cggcctgctg cccgcctcat ttttgccagg cgacagcttg ttgatattgg ctggcgcatt
    27781 gattgcccag ggggttatgg attttctgcc tacgattacg attctgaccg ccgcagcaag
    27841 tctgggctgc tggctaagtt atattcaggg gcgctggtta gggaatacca aaacggtgaa
    27901 aggctggctg gcacagcttc ctgctaaata tcaccagcgc gccacctgca tgtttgaccg
    27961 ccacggtctg ctggcgctac tggctggacg ttttcttgca tttgtccgta cgctgctgcc
    28021 aaccatggcg ggaatttccg gtctgccaaa ccgccgtttc cagtttttca actggttaag
    28081 cggattgctg tgggtcagcg tggtaaccag tttcggctat gccttaagta tgattccgtt
    28141 cgttaaacgc catgaagatc aggtaatgac gttcctgatg atcctgccaa ttgccttgtt
    28201 aaccgctggc ttgttaggca cgctgtttgt ggtgattaaa aaaaaatact gtaacgcctg
    28261 acgattttcc ctgttcccgg ttgctgtacc gggaacgtat ttaattcccc tgcatcgccc
    28321 gcattcttgc cgcatcttcc cccggcgtca caccgaagta acgtttaaac tcacggctaa
    28381 attgcgatgc gctttcatag ccgacgcgca tcgctgctgc gctggccttc atgccgtcat
    28441 ggatgatcat catccgcgcc ttatgcagac ggtaattctt caaatactgc aacggcgagg
    28501 tgctggtgac agacttaaaa ttatggtgga acgccgatac gctcatgttg gcttctgccg
    28561 ccagttgctc gacgctcagg ttttcggtgt atttattctc aatccgtttc agcacgcggc
    28621 taatcaggct gaagtgagtc tggcgactga ccagcgccag taacgcaccg ccgcaaggtc
    28681 cggtcagcac gtagtacaga atttcgcgga tgatctgttt gccgagaata cgcgcatcca
    28741 gtggtcgctc catcacgtcg agtaaccgct ccgccgcgca taaaatctct tctgataacg
    28801 tggcggagtt aatcccgctg gctgccatcg acggctggaa atgctcatct tcgccaatgt
    28861 ccatcaacag ttcctgtaac tgcaaaatat cgacattgag acgcaaccct gccagcggca
    28921 cctctgacgt ggcataggtt tcgcactcaa acggcaacgg caccgtcagc agcaggtatt
    28981 cattggcatc ataacgaaac acgcgttcat tgatataacc gattttatgt ccggaaaaga
    29041 gaattatgat gccaggctcg tacatcaccg gtgtacgtgc gaaaggcgtc tcgccataca
    29101 acaaacgcac atcgggcaac agttctgaca aactattttc tttatttttc agtttattaa
    29161 ctttatccgc cagcaagcgg caaatctctt cacgtttcat atcgcgtaat ttcttaggaa
    29221 taatgcggca atttgattgt gcgcaatttt gtagcatttc tccagcactc tggagaaata
    29281 ggcaagacat tggcagaaat gagcattgag agccagggcg ctggcgatca caatgaaaaa
    29341 catcaggcag atcgttctct gccctcatat tggcccagca aagggagcaa gtaatgaaca
    29401 actttaatct gcacacccca acccgcattc tgtttggtaa aggcgcaatc gctggtttac
    29461 gcgaacaaat tcctcacgat gctcgcgtat tgattaccta cggtggcggc agcgtgaaaa
    29521 aaaccggcgt tctcgatcaa gttctggatg ccctgaaagg catggacgtg ctggaatttg
    29581 gcggtattga gccaaacccg gcttatgaaa cgctgatgaa cgccgtgaaa ctggttcgcg
    29641 aacagaaagt gactttcctg ctggcggttg gcggcggttc tgtactggac ggcaccaaat
    29701 ttatcgccgc agcggctaac tatccggaaa atatcgatcc gtggcacatt ctgcaaacgg
    29761 gcggtaaaga gattaaaagc gccatcccga tgggctgtgt gctgacgctg ccagcaaccg
    29821 gttcagaatc caacgcaggc gcggtgatct cccgtaaaac cacaggcgac aagcaggcgt
    29881 tccattctgc ccatgttcag ccggtatttg ccgtgctcga tccggtttat acctacaccc
    29941 tgccgccgcg tcaggtggct aacggcgtag tggacgcctt tgtacacacc gtggaacagt
    30001 atgttaccaa accggttgat gccaaaattc aggaccgttt cgcagaaggc attttgctga
    30061 cgctgatcga agatggtccg aaagccctga aagagccaga aaactacgat gtgcgcgcca
    30121 acgtcatgtg ggcggcgacg caggcgctga acggtttgat tggcgctggc gtaccgcagg
    30181 actgggcaac gcatatgctg ggccacgaac tgactgcgat gcacggtctg gatcacgcgc
    30241 aaacactggc tatcgtcctg cctgcactgt ggaatgaaaa acgcgatacc aagcgcgcta
    30301 agctgctgca atatgctgaa cgcgtctgga acatcactga aggttccgac gatgagcgta
    30361 ttgacgccgc gattgccgca acccgcaatt tctttgagca attaggcgtg ccgacccacc
    30421 tctccgacta cggtctggac ggcagctcca tcccggcttt gttgaaaaaa ctggaagagc
    30481 acggtatgac ccaactgggc gaaaatcatg acattacgct ggatgtcagc cgccgcatat
    30541 atgaagccgc ccgctaagct ttttacgcct caaactttcg ttttcgggca tttcgtccag
    30601 acttaagttc acaacacctc accggagcct gctccggtga gttcatataa aggaggaacg
    30661 tatggctaat ccaaccgtta ttaagctaca ggatggcaat gtcatgcccc agttgggact
    30721 gggcgtctgg caagcaagta atgaggaagt aatcaccgcc attcaaaaag cgttagaagt
    30781 gggttatcgc tcgattgata ccgccgcggc ctacaagaac caagaaggtg tcggcaaagc
    30841 cctgaaaaat gcctcagtca acagagaaga actgttcatc accactaagc tgtggaacga
    30901 cgaccacaag cgcccccgcg
//
LOCUS       DAJVTL010000043        30812 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.043, whole genome shotgun sequence.
ACCESSION   DAJVTL010000043 DAJVTL010000000
VERSION     DAJVTL010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30812
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.043"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..2540)
                     /locus_tag="OQQ26_001835"
     CDS             complement(<1..2540)
                     /locus_tag="OQQ26_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCS1857303.1"
                     /translation="MYKKLKLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAE
                     DRENVNLSQFETDGQLPVGKYSLNALINNKRTPIHLDLQWVLIDNQTAVCLAPEQLTL
                     LGFTEEFIEKTQQSMIDGCYPIEKEKQITTYLDKGKMLLSISAPQAWLKYKDANWTPP
                     ELWDDGIAGAFLDYNLYASHYAPHHGDNSQNISSYGQAGANLGAWCLVPGAWCLVPGA
                     WRLRADYQYDQSFNNGKTQATNLDFPRIYLFRPIPAINAKLTIGQYDTESSIFDSFHF
                     SGVSLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLF
                     NTLQGQLDVKVEEEDGQVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPF
                     FWTGEFSWGWLNNVSLYGGSVLTNRDYQSLATGVGFNLNSLGSLSFDVTRSDAQLHNQ
                     DKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVSMNEYINDTNHYTNYQNEKESY
                     IVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSLTFSRI
                     NWEDDDQDQLYLSISIPWGGSRTLSYGMQRNQDNKISHTASWYDSSDRNNSWSVSASG
                     DNDEFKDMKASLRASYQHNNENGRLYLSGTSQRDSYYSLNTSWNGSFTATRHGAAFHD
                     YSGSADSRFMIDADGAEDIPLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTRNLPENV
                     DIENSVITTTLTEGAIGYAKLDTRKGYQIMGVIRLADGSHPPLGISVKDETSHKELGL
                     VADGGFVYLNGIQDDSKLALRWGDKSCFIQPPNSSNLTTGTVILPCVS"
     gene            complement(2600..3151)
                     /locus_tag="OQQ26_001836"
     CDS             complement(2600..3151)
                     /locus_tag="OQQ26_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein"
                     /protein_id="HCS1857304.1"
                     /translation="MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIK
                     PGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQDGTTYSKAKVTFTTANTM
                     TGQTDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARM
                     ESPGKDATPGNVYAQADYKIAYE"
     gene            complement(3434..3724)
                     /gene="ubiK"
                     /locus_tag="OQQ26_001837"
     CDS             complement(3434..3724)
                     /gene="ubiK"
                     /locus_tag="OQQ26_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis accessory factor UbiK"
                     /protein_id="HCS1857305.1"
                     /translation="MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRL
                     DLVSREEFDVQTQVLLRTREKLALLEQRMSKLENRSTEIKKQPDPETLPPTL"
     regulatory      3846..3994
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            4098..4751
                     /gene="ribB"
                     /locus_tag="OQQ26_001838"
     CDS             4098..4751
                     /gene="ribB"
                     /locus_tag="OQQ26_001838"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HCS1857306.1"
                     /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTMRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
     gene            5012..5182
                     /locus_tag="OQQ26_001839"
     CDS             5012..5182
                     /locus_tag="OQQ26_001839"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857307.1"
                     /translation="MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYL
                     NSTREETAEKVE"
     gene            complement(5240..6013)
                     /gene="zupT"
                     /locus_tag="OQQ26_001840"
     CDS             complement(5240..6013)
                     /gene="zupT"
                     /locus_tag="OQQ26_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HCS1857308.1"
                     /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
                     LLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP
                     KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVD
                     ELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
     gene            6156..6944
                     /gene="ygiD"
                     /locus_tag="OQQ26_001841"
     CDS             6156..6944
                     /gene="ygiD"
                     /locus_tag="OQQ26_001841"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HCS1857309.1"
                     /translation="MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVV
                     VSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVT
                     LDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIML
                     VASGNMVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGAL
                     SNPTPEHYLPLLYVLGVWDGQEPITIPVDGIEMGSLSMLSVQIG"
     gene            complement(6982..8142)
                     /locus_tag="OQQ26_001842"
     CDS             complement(6982..8142)
                     /locus_tag="OQQ26_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HCS1857310.1"
                     /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQ
                     VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
                     LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
                     RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDEIGLGEKGQ
                     FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
                     VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE"
     gene            complement(8148..8819)
                     /locus_tag="OQQ26_001843"
     CDS             complement(8148..8819)
                     /locus_tag="OQQ26_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HCS1857311.1"
                     /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS
                     RSMGG"
     gene            complement(8967..10448)
                     /gene="tolC"
                     /locus_tag="OQQ26_001844"
     CDS             complement(8967..10448)
                     /gene="tolC"
                     /locus_tag="OQQ26_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HCS1857312.1"
                     /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
                     DRDAAFEKINEARSPLLPQLGLGADYTYSNDYRDANGINSNATSASLQLTQSIFDMSK
                     WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
                     QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
                     NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST
                     GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
                     SEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
                     DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
                     NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
     gene            10707..11336
                     /gene="nudF"
                     /locus_tag="OQQ26_001845"
     CDS             10707..11336
                     /gene="nudF"
                     /locus_tag="OQQ26_001845"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HCS1857313.1"
                     /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQ
                     MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
                     ESVEDVARREAIEEAGLRVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA"
     gene            11337..11759
                     /locus_tag="OQQ26_001846"
     CDS             11337..11759
                     /locus_tag="OQQ26_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HCS1857314.1"
                     /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
                     YRLTIVESTRYTTLVTIEQTAPAISYCSLPSMTVRLYHGAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
     gene            11784..12611
                     /gene="cpdA"
                     /locus_tag="OQQ26_001847"
     CDS             11784..12611
                     /gene="cpdA"
                     /locus_tag="OQQ26_001847"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HCS1857315.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA
                     VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
                     ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
     gene            12611..13192
                     /gene="yqiA"
                     /locus_tag="OQQ26_001848"
     CDS             12611..13192
                     /gene="yqiA"
                     /locus_tag="OQQ26_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HCS1857316.1"
                     /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
                     SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
     gene            13221..15113
                     /gene="parE"
                     /locus_tag="OQQ26_001849"
     CDS             13221..15113
                     /gene="parE"
                     /locus_tag="OQQ26_001849"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HCS1857317.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
                     LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
                     HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKANVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
                     MAEIEV"
     gene            complement(15161..15475)
                     /locus_tag="OQQ26_001850"
     CDS             complement(15161..15475)
                     /locus_tag="OQQ26_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HCS1857318.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
                     DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
                     GI"
     gene            complement(15506..16087)
                     /gene="mdaB"
                     /locus_tag="OQQ26_001851"
     CDS             complement(15506..16087)
                     /gene="mdaB"
                     /locus_tag="OQQ26_001851"
                     /EC_number="1.6.5.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase MdaB"
                     /protein_id="HCS1857319.1"
                     /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
                     DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
                     DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGI
                     EPLPTFIANDVIKMPDVPHYTEEYRKHLVEIFG"
     gene            16405..16899
                     /locus_tag="OQQ26_001852"
     CDS             16405..16899
                     /locus_tag="OQQ26_001852"
                     /inference="COORDINATES: protein motif:HMM:NF022296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2645 family protein"
                     /protein_id="HCS1857320.1"
                     /translation="MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICS
                     IPSVSGEDRILQAMIAAFFLLTPLINSYLKKTLYAGNVRVLAICILARYLSGLWLVAF
                     LGTVYILLLVKSMRVVLTALIDREVTSLPSPQIHLVPHSQTQHSCHAAWRFAGQSIAQ
                     VHCR"
     gene            complement(16784..18133)
                     /gene="qseC"
                     /locus_tag="OQQ26_001853"
     CDS             complement(16784..18133)
                     /gene="qseC"
                     /locus_tag="OQQ26_001853"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HCS1857321.1"
                     /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
                     DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDG
                     DNGEDIPYSYQREGFADGQLVGDKDQWRFVWMTSPDGNYRIVVGQEWEYREDMALAIV
                     AGQLIPWLVALPIMLIIMMVLLGRELSPLNKLALALRMRDPDSEKPLNATGVPSEVRP
                     LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
                     LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
                     VRLTLNAHGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVIDVTLNADNFIVRDNGPGV
                     TPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHDMNVEFGNAEQGGFEAKVSW"
     gene            complement(18130..18789)
                     /gene="qseB"
                     /locus_tag="OQQ26_001854"
     CDS             complement(18130..18789)
                     /gene="qseB"
                     /locus_tag="OQQ26_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HCS1857322.1"
                     /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKP
                     FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLEL
                     LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
                     K"
     gene            18940..19332
                     /gene="ygiW"
                     /locus_tag="OQQ26_001855"
     CDS             18940..19332
                     /gene="ygiW"
                     /locus_tag="OQQ26_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB fold stress tolerance protein YgiW"
                     /protein_id="HCS1857323.1"
                     /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG
                     SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            19385..19867
                     /locus_tag="OQQ26_001856"
     CDS             19385..19867
                     /locus_tag="OQQ26_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1857324.1"
                     /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
                     GLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
                     RHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA
                     "
     gene            19976..21541
                     /locus_tag="OQQ26_001857"
     CDS             19976..21541
                     /locus_tag="OQQ26_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1857325.1"
                     /translation="MYTRNLLWLVSLVSAAPLYAADVPANTQLAPQQVFRYNNHSDPG
                     TLDPQKVEENTAAQIVLDLFEGLVWMDGEGQVQPAQAERWEILDGGRRYIFHLRSGLQ
                     WSDGQPLTAEDFVLGWQRAVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKAA
                     DDRTLEVTLEQPVPWFTTMLAWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDQWV
                     VNEKITARKNPKYRDAQHTVLQQVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIE
                     KSLPGELRIIPRLNSEYYNFNLEKPPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATT
                     LTPPEVKGFSATTFDELQKPMSERVAMAKALLKQAGYDASHPLRFELFYNKYDLHEKT
                     SIALSSEWKKWLGAQVTLRTMEWKTYLDARRAGDFMLSRQSWDATYNDASSFLNTFKS
                     DSEENVGHWKNAQYGALLNQATQITDATKRNALYQQAEVIINQQAPLIPIYYQPLIKL
                     LKPYVGGFPLHNP"
     gene            21721..23979
                     /gene="parC"
                     /locus_tag="OQQ26_001858"
     CDS             21721..23979
                     /gene="parC"
                     /locus_tag="OQQ26_001858"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HCS1857326.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
                     AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
                     LASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
                     PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG
                     EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
                     SPRRASSGDSEE"
     gene            24213..24950
                     /gene="plsC"
                     /locus_tag="OQQ26_001859"
                     /gene_synonym="parF"
     CDS             24213..24950
                     /gene="plsC"
                     /locus_tag="OQQ26_001859"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HCS1857327.1"
                     /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWLP
                     FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
                     AHCRSIMEQKISELDKEVAEREAAGKV"
     gene            25025..26437
                     /gene="ftsP"
                     /locus_tag="OQQ26_001860"
     CDS             25025..26437
                     /gene="ftsP"
                     /locus_tag="OQQ26_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HCS1857328.1"
                     /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
                     GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
                     VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
                     WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
                     SPYVEVSRGWVRLRLLNASSSRRYQLQMSDGRPLHVISGDQGFLPAPVSVKQLSLAPG
                     ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
                     SLPMCLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRANE
                     PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
                     QTLEMADRGSIGQLLVNPVP"
     gene            26548..28767
                     /locus_tag="OQQ26_001861"
     CDS             26548..28767
                     /locus_tag="OQQ26_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HCS1857329.1"
                     /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
                     DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEGLPCADNKPVAPKKQEAKA
                     VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNLGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
                     KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
                     FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYK
                     SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
                     EMREACRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
     gene            complement(28810..29067)
                     /gene="yqhH"
                     /locus_tag="OQQ26_001862"
     CDS             complement(28810..29067)
                     /gene="yqhH"
                     /locus_tag="OQQ26_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YqhH"
                     /protein_id="HCS1857330.1"
                     /translation="MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE
                     QDIKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE"
     gene            complement(29118..30044)
                     /locus_tag="OQQ26_001863"
     CDS             complement(29118..30044)
                     /locus_tag="OQQ26_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjP/YqhG family protein"
                     /protein_id="HCS1857331.1"
                     /translation="MKIILLFLAALASFTVHAQPPSQTVEQTVRHIYKNYKSDATAPY
                     FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD
                     ADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA
                     ALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM
                     QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR
                     REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ"
     gene            complement(30244..>30812)
                     /locus_tag="OQQ26_001864"
     CDS             complement(30244..>30812)
                     /locus_tag="OQQ26_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311923.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HCS1857332.1"
                     /translation="ALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGL
                     IKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPL
                     AQGGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIVENFDVWDF
                     RLDKDELGEIAKLDQGKRLGPDPDQFGG"
BASE COUNT         7438 a         7480 c         8028 g         7866 t
ORIGIN      
        1 tggctaacac acggtaaaat aaccgttccg gtggttaagt tgctgctatt ggggggttga
       61 ataaaacaag atttgtcacc ccagcgtaaa gcaagtttgc tatcatcctg aatgccgttg
      121 aggtatacaa agccgccatc agcaaccaat cctaattctt tgtggctggt ttcatctttt
      181 acgctaatcc ccagaggtgg atgactacca tccgccagac gaataacccc catgatttga
      241 tagcccttgc gggtatcaag tttggcgtag ccaatagcac cttcggttaa ggtggtggtg
      301 ataaccgaat tctcgatatc cacattttct ggcagatttc gggtatcaac acttaatgat
      361 gttgttatgt aactgctgac tgatggaata actccgatgc cataacgatt agttactgcg
      421 cgtttattat tcaatggaat atcttcagcg ccgtctgcgt cgatcataaa acgcgagtca
      481 gcactaccgc tatagtcgtg gaaagcggcg ccgtgacgag tcgccgtgaa tgaaccattc
      541 caactggtat tcagagaata gtaactgtct cgctgtgatg taccggagag gtagagacga
      601 ccgttctcgt tattatgctg ataactggcg cgtagtgacg ctttcatatc tttgaattcg
      661 tcattgtcgc ctgaagcaga aacactccat gaattatttc gatcggaaga gtcataccat
      721 gaagcggtat gtgaaatctt gttatcctga ttgcgttgca taccataact caatgtcctg
      781 ctgccccccc agggaatcga tatacttaaa tacagttgat cctggtcgtc atcttcccag
      841 tttattcggc taaatgttaa agaggtggag acgtttttca atggcccgat atcaaaatcg
      901 cggctaagag acaatgaata atttacatta ctgctggcgt cccagtaagt attacgagcc
      961 aggcttacgt aagtatttaa tctcaatgat tcaagatact ggttaaacgt gacaatatag
     1021 ctttcttttt cattctgata atttgtgtaa tggttagtgt cattaatata ttcattcatc
     1081 gacacaaaat ttttatctga gaaacggtag ccagcgaaag tgagttggct accggtagat
     1141 tcaaaacgtt ttgaatagtt agcgcgatag ctataacccg tttctttatc ctgattatgt
     1201 aactgagcat cggagcgcgt gacatcaaag gataatgagc ccaatgagtt aagattaaag
     1261 ccaacaccgg tcgccaggga ttgataatca cgattagtta atactgaacc accatacagg
     1321 gatacattat tcagccaacc ccatgagaat tcaccagtcc agaagaaggg ctgttgtaag
     1381 gaatcgccgc caacgcttgt cggtttaccc atagcagtgg tgtagcgaat ctgcccttta
     1441 cgcgtcagat aagggatact attggacgca acttgccatt gcgtgacttg cccgtcctct
     1501 tcttcaacct tgacgtccag ttgcccctgt aatgtattga ataaattagt aatagcaaat
     1561 gggccaggag gaacattttc ttgataaata atacggttgt tctgtgagac agtgaccttt
     1621 gcattcgttt gtgcaacacc cgtgatttgc ggtgcgtaac cacgtagatc aggcggcaac
     1681 atattctcat cgcttttcaa cgaaacgcca gaaaaatgga aagagtcgaa aatagaggat
     1741 tcagtatcgt attgacctat agttagtttt gcattaattg ctgggattgg gcgaaacaaa
     1801 taaatacgcg gaaaatccag gtttgtcgcc tgggttttac cattattaaa tgactgatcg
     1861 tactggtaat cagcacgcag gcgccaggca ccaggcacca ggcaccaggc accaggcacc
     1921 aggcaccagg caccaagatt agcgccagcc tgtccatagg aacttatatt ttgtgaatta
     1981 tcgccatgat gtggggcata atgagaagca tataaattat aatccagaaa tgcacccgca
     2041 ataccatcat cccaaagctc aggaggtgtc cagtttgcat ctttgtattt taaccatgcc
     2101 tgaggtgcag atatggataa cagcatttta cctttatcga ggtaagttgt aatttgtttt
     2161 tctttttcga tagggtaaca accatcgatc atggattgct gagttttttc aataaactcc
     2221 tcagtaaagc ctaataatgt caattgctct ggtgccagac aaactgcagt ttggttatca
     2281 attaataccc attgcaggtc cagatggatt ggcgtccttt tattattaat aagagcgttt
     2341 aatgagtatt tacctacggg taattggcca tcagtttcaa attgggaaag gttaacgttt
     2401 tcacgatctt cggcttcgat taaatctttg ttgaattcaa cggcataagc tgacgcacaa
     2461 ccaatgatga gaacggataa tgaacaataa atatttttaa tcaattcgct tattgtggtt
     2521 aattttaatt ttttatacat ctgttccact tatcattaat ccgttaatga tgtggccggg
     2581 cgaacccggc ctaatgtgat tactcgtaag caatcttata gtcagcctga gcgtaaacgt
     2641 tgcccggggt agcatctttg cccggggatt ccatacgagc tttgaagttc agttcctgat
     2701 agctgttagt attgttgaat gtaattacta ccggagtacc taaagtcact tcgccgctct
     2761 ggctatccag aatacgtacg ccaacgcctg tggcaccacc gatttcagtt tctttggtgt
     2821 ttttcagcag gtcagtctga cccgtcatag tattcgctgt ggtgaaagta accttcgctt
     2881 ttgaataagt ggttccatcc tggctcaaca tgcagtcttg caggtgaata gtgaaaggct
     2941 cagccaaaga tttctggtcg cttttcagaa cggtatctgc tacttcaccc agatttacag
     3001 ttaagtcttc gtcacctggt ttaattgaac atggagcaga gataacttca cctttaaatt
     3061 taacaatgcc gtgaccttcg tcagcaaata cgttattgga aagaatcatt gctacgccag
     3121 caacaagaag tgacttttta aaagcagaca taatattcct ttatataaat ataagtagaa
     3181 aatgaatgat tagtaactgt tatttaagga ttgctaatca ttcaaatatt atattttact
     3241 tttcgggttt tatgaagtta gtttatctaa atatggatta agtaaaactt aaaaaataca
     3301 taacaattat attttcaatt gcactcattc atttttgtga tgatattctg aatggaatta
     3361 agcgataagg taatagaaag cactgtaaat tagaagatta attcataatt tacagtgcat
     3421 taaagacaaa tgtttacagc gttgggggga gagtctctgg atctggctgc tttttaatct
     3481 cagtactgcg attttccagt ttgctcattc tttgttcaag cagcgccagt ttctcgcgag
     3541 tccgtaacag gacttgcgtt tggacgtcga actcttcacg gcttacaagg tcgaggcgcg
     3601 tcagctgcgc ttgtagggtt tggcggattt ttttctccac atcttccccg aactccctga
     3661 ttcctttagg cattgattcg tgaacctggc gagcgatttg ctcaattttt ttcgggtcaa
     3721 tcattgtagt ttccctgtac tgataggtgt tgagtgccat tgtagtgcga taagggtaag
     3781 tcataaacca gaattatgtg aagctatgcg ttgctgccgc taatcattag cgttatagtg
     3841 aatccgctta ttctcagggc ggggcgaaat tccccaccgg cggtaaatca actcagttga
     3901 aagcccgcga gcgctttggg tgcgaactca aaggacagca gatccggtgt aattccgggg
     3961 ccgacggtta gagtccggat gggagagagt aacgattctg tcgggcatgg acccgctcac
     4021 gttattttgg ctatatgccg ccactcctaa gactgccctg attctggtaa ccataatttt
     4081 agtgaggttt ttttaccatg aatcagacgc tactttcctc ttttggtacg cctttcgaac
     4141 gtgttgaaaa tgcactggct gcgctgcgtg aaggacgcgg tgtaatggtg cttgatgatg
     4201 aagaccgtga aaacgaaggc gatatgatct tcccggcaga aaccatgacc gttgagcaga
     4261 tggcgctgac catgcgccac ggtagcggta ttgtttgcct gtgcatcact gaagatcgcc
     4321 gtaaacaact tgatctgcca atgatggtag aaaataacac cagcgcctat ggcaccggtt
     4381 ttaccgtgac cattgaagcg gctgaaggtg tgactaccgg tgtttctgcc gctgatcgta
     4441 ttacaaccgt tcgcgcagcg attgccgatg gcgcaaaacc ttctgatctg aatcgcccgg
     4501 gccacgtttt cccacttcgc gcgcaggcag gtggtgtact gacgcgtggc ggtcatactg
     4561 aagcgactat tgatttgatg acgctggcag gctttaaacc ggctggtgtg ctgtgtgagc
     4621 tgactaatga cgatggcacg atggcgcgtg caccagagtg cattgagttt gccaataaac
     4681 acaatatggc gctcgtgact attgaagacc tggtggcata ccgtcaggca catgagcgta
     4741 aagccagctg aaaaccgctg cttaattact gccttaatca agaaaccgaa gttgtagctg
     4801 gcttcggttt ttattttgcc ctgctatgca agatgttaat tccgcttctc tttctatgag
     4861 aaaatttcat taatatcagg cattcttttt cattatgatc aaaatcatat aattgttccg
     4921 ttattatgcg accatatgaa tatatccgaa aaaggatatg tgaaatttat gcgctaaatg
     4981 tttagtattg ttaaatatta agggtaaaag gatgtttatc gcctggtact ggattgtatt
     5041 gattgctctg gttgtggtgg gttatttcct gcatttgaaa cgttattgtc gggcgtttcg
     5101 ccaggacaga gacgcactgc ttgaagcgcg gaacaaatac ttaaacagta cgagagaaga
     5161 gacagccgaa aaggtagaat aaggctttcg tgaagctggc agaagttgtc catgtgctgg
     5221 acaacttctg atgttgtttt taaccaattc ccgccgtttg tagcagcact aaactgaatc
     5281 ccatcactga cattccacat agtacgccat agctggggtt attattaggg tcaatctctt
     5341 tggcgagcgg cattaattca tcaaccgaga gcgccaccat aattcctgca accgccgcca
     5401 tgattgctgc catgaccacc ggggaaatca tgctaccgag gattaaccac gccagcacac
     5461 caccaagaat ttctgctagt ccagaaatcc ccgcccacag aatcgcggtg cgtttagacc
     5521 ccgttgccgc ataaaccggg cctgccactg ccagaccttc agggatattg tgcaacgcga
     5581 cggccagtgc gatgccaaat cccagctcca ggttgctgct cgccgtgaca aaggtggcaa
     5641 tcccttccgg gaagttatgc agactgatgc cgagagtgag cagaatggct gtgcgcttga
     5701 tcgattttgg caacggctgc accgattttt gcattaaatc ctgcggatgc gcatgcggca
     5761 acatgcggtc caggccaaag tagccaagca gaccgaagat aaacattcca taacccaaca
     5821 caggcgacat tccttcagct gctagtgcgg caggaagcat ttccattaat gagatgagca
     5881 acatgatccc cgccgcaaaa cctagcgaaa acgccagtaa gcggttcgag ggtttttgtc
     5941 cgagaacgcc gagaaacgcg ccaataaacg tggctgcccc cgccagtatg gtcagaatga
     6001 gaggtactga catcgacaac tccttataaa tcttcacctt caggcagatc gtcaaaataa
     6061 ctgatgatca tcatcattgt tatccgggtt cttactccgc cgaacaagcg tattgtgagg
     6121 atatcaaaat gacaccttta gttaaggata tcatcatgtc ttcaacacgt atgccagcat
     6181 tgtttttagg tcacggtagt ccgatgaacg tgctggaaga taatttgtat acccgcagct
     6241 ggcagaaatt ggggatgaca ttgccacgcc cgcaagcgat tgtggtggtt tcggctcact
     6301 ggtttacccg tggaacagga gtgaccgcga tggagacgcc gcccacgatt catgactttg
     6361 gtggcttccc gcaggcgctg tacgatacgc attatcctgc tccgggttcg cctgcgctgg
     6421 cacagcgtct ggttgagctg ttagcgccga tcccggtgac gctggataaa gaagcctggg
     6481 gctttgacca cggctcgtgg ggcgtgctga ttaagatgta tcctgacgcc gatatcccta
     6541 tggtgcagtt gagtatcgac agtagcaaac ctgccgcctg gcatttcgaa atggggcgca
     6601 aactcgcggc gctgcgtgat gaaggaataa tgttggtcgc cagcggtaac atggtgcata
     6661 acctgcgcac agtgaagtgg cacggtgata gttcaccgta tccgtgggcg acgtcgttta
     6721 atgagtatgt gaaagcgaat ctgacgtggc aagggccggt agagcagcat cctctggtga
     6781 attatctcga ccatgaaggt ggcgcgttat cgaacccaac gccagagcac tatctgccgt
     6841 tgttgtatgt gttaggtgtg tgggatgggc aggagccaat taccattccg gtcgatggta
     6901 tagaaatggg cagtttaagt atgctgtcgg tgcagatagg ctaacaatta ccggatggcg
     6961 agtgccatcc ggtatcgtgg cttattcaac aaaaatatgt ggataaaacc gagacatatc
     7021 ctgggtgatc aacgcacggt cttcacgaat gccaattccg gcaggttgat cgttcaccag
     7081 ccagctacca atcagcatat agctgtcgcc gaatttcggt aacgggtgga attgctgaac
     7141 aatcatccct tcttcgccat acggaccttc cgctgcttca atggttttgc cgttctcaat
     7201 gatcgacacg tttgcgcctt cacgggagaa gatcggttta accacatatt tttccatttg
     7261 cggatgatca tcttccgcaa aataagcggg cagcaggttc gggtgattcg ggaacatctc
     7321 ccacagtagc ggtagaagtg ccttgttgga gataatgctc ttccacgccg gttccagcca
     7381 gcgtacgcca gcatcttcca gcttggtgga gaacatttcg cgcagcataa attcccacgg
     7441 ataaagcttg aacaggttag aaatcacctg atcctgtaaa tccgtgaact ggcctttttc
     7501 gcctaaacct atctcgtcga tgtagaggaa ctcggtggcg atttcagctt cggttgcgca
     7561 gtcctgcaaa tactgaatgg ttccgcgatc ttccaccgtg tcgcgacagc aggtgagatg
     7621 cagcaactgg aagccatact gttcacgcag ctcaacgaag cgatcgatca gtttttcttg
     7681 cagactgtta aactggtcgc tgccctccgg caagttaccg gcgttaagct gatcttccag
     7741 ccagatccac tgaaagaacg ccgcctcgta tagtgacgtt ggcgtatcgg cgttattttc
     7801 cagaagttta ggttcgccag tgccatccca cgccagatca agacgcgaat aaagcgatgg
     7861 ctggtgagtc agccatgatt gacgcacaaa actccaggtg tgttttggta tgcggaattt
     7921 ggtcatcagc tcatcgctgg cgatcacttt ttccaccact ttcaggcaca tctggtgcag
     7981 ttcggcggtg acttcttcca gcttttcaac ctgggcgagg gtcaacttgt agtaagcatc
     8041 ttcacaccag tacggctcgc cgtacatggt gtgaaaattg aaaccgtatt cgtgggcttt
     8101 ctcacgccag tccgggcgct cggtaatact gactctttcc atcggtatca gccacccatt
     8161 gaacgagaag atgtgccagt tgcgctacgc tgcatagtgc tttgtttggc aacagattca
     8221 ccaaaaccgc cacgggtaac ggtagtggtg gtcgccggtt ttggtgccat tgccgtcttc
     8281 ggtacggtca tggtgcggcc tggctgggct gcgccatagt ttttacccgt cgcgtcggta
     8341 tatttaccgt aagccggact ggctgggttt ttcgaggaga acagcggctg ctgtgcaaat
     8401 cccgcgccgc cgcccatcag acgccccatc atgtaaccgg ccatcagcgg catccagaaa
     8461 ctcccgctgg attgctgagc ctgcgcctgg ttttctggtg ccatgccagc ctgggctggt
     8521 gcttgctggc actgaccttc accaaattca gcaacacagt cttcacgggt ggcgtatttc
     8581 ggcgcagtac gttcggcttc tttcagcgca ttgttgtacg cggtggtaca ttcggcgctt
     8641 ttgcctgggt ttgcagctga acagtcgtca gcattttgat agagagacac tgtttcatca
     8701 ctcttttcac agccagccag cataaaaaca gtggcaaccg cgagagcgac tggtgtcaga
     8761 tggcgtgcgc tccagttttt gcggaacgat gcgtggcgta tggattttgt ccgtttcatt
     8821 tttgtcttcc gggaccagtg gtaaataccc atcagaatag aggatggctg gtcgaaattg
     8881 aagcgagaag ggggaagaat gcggcagata acccgtatct ttacgttgcc ttacgttcag
     8941 acggggccga agccccgtcg tcgtcatcag ttacggaaag ggttatgacc gttactggtg
     9001 gtagtgcgtg cggatgtttg ctgaacgacg ggggccgggc tatcaggcgc ataaccatca
     9061 gcaatagcat tctgttccgg cgtttgcggg gcaacgtttt ccggattagt ggaaaccggt
     9121 ttgctcagcg cattgttcag tgccagcaaa tcctgctcgt tcaacgtacc cagggctgac
     9181 ttaatattca gctgattaat caggtagtta taacgcgcat tcgccagctc ttgcttggcg
     9241 ttgtacagcg tggtggtcgc atccaacaca tcaacaatgg tacgcgtacc gaccgagtag
     9301 cccgcttcca tcgcgtctaa tgagctttga gcggaaacta cggcttgttt gtaggcgtta
     9361 atactactga tagaagcatt aatgttgttg aaggaggaac gtacggtttg cacgacgcta
     9421 cgatgtgcgc tttccagttg ctcgctggca ccaacaaagt tgtactgtgc ctgtttcacc
     9481 tgcgagttaa ccattccgcc ctgataaatc ggcagcgaga agctcaggcc aactttgttc
     9541 tggcccatat tgctatcgtc atactgggta ccagcggcac cacgggtttt cgaaccgcta
     9601 taagaggtgt cagaaatccc ggtagaagcc gttaaatcca gagtcggtaa gtgaccatcc
     9661 tgcgcctggc gaatttgctc gcgcgccagg tcctggctca agcgtgcctg taacagcgac
     9721 aggttgcgtt tttcggcttc tttcagcagc gcgttaaccg gctgtggttt gtcggtttta
     9781 aagttttcga cattcagcgc tgccagttcc ggatagtagt taccggtgat ctggcgcagc
     9841 tgctctaccg cgttatcaag gttattacgt gcggtcactt cgttcgccag cacggtatcg
     9901 tactgcgcgc gggcgttctg cacgtcggtg atcgctacca ggcccacgtt aaaacgttgg
     9961 gtggtttgat ctaattgacg gtagatcgct tctttttgcg cctgtgtata ggaaagaacg
    10021 tcaatagcat tcaacacgtt gaaataagcg gtcgcggtgt tgaggatcaa ggtttgctga
    10081 tcggtctgat atgtgacgtc ctgaatccct gctgcttttt cctgcagcgt taacgcacgc
    10141 catttcgaca tatcaaaaat ggattgagtt aactgcaggg acgcactggt cgcgttagag
    10201 ttgatgccgt tcgcgtcgcg gtagtcgttg ctataggtgt aatctgcacc taaacctagc
    10261 tgtggcagta atggactgcg cgcttcatta attttttcaa aggcagcatc acgatcggcg
    10321 gcagacttac gcaattccgg gttactaagg cgtgcttgct gataaacttg catcaggttc
    10381 tcggcctggc tcaacgaact gaacccagaa aggctcaggc cgataagaat ggggagcaat
    10441 ttcttcattt gcattccttg tggtgaagca gtatttagcg cgatcaaact gtaaaattat
    10501 tgcggattct agcagaagcc gctaccgcaa aaggttggcg ttatgtgcca tagggcgtta
    10561 atgtgccata gggcgttaat gtgccatagg gcgttaatgt gccatagggc gttaatgtgc
    10621 ctcaatttaa cacatgactg ctcaaacggc agtcaaacgt cgctgaaatt cacatttaat
    10681 tcactattag tgccaggaca ttaacaatgc ttaagccaga caacctgccc gttacatttg
    10741 gcaaaaacga tgtagaaatt attgcacgag aaacacttta tcgcggcttt ttttcattag
    10801 atctttatag atttcgtcat cgtctattca acgggcaaat gagtcatgag gtacggcggg
    10861 aaatttttga gcgcggtcac gccgcagtct tgctaccctt tgacccagtg cgtgatgaag
    10921 ttgtgctgat tgagcagatt cggattgccg cgtacgacac cagcgaaacc ccctggctac
    10981 tggagatggt tgccgggatg attgaagagg gtgaaagtgt ggaagatgtt gcccgtcgcg
    11041 aagcgattga agaggctgga ctgagagtca aacggaccaa accggtgtta agttttctgg
    11101 caagcccggg gggcaccagt gagcgttcgt caattatggt gggcgaagtg gacgccacga
    11161 ccgcaagcgg tattcacggt ctggctgatg aaaacgaaga tattcgcgtt catgtggtaa
    11221 gccgggaaca ggcataccag tgggtagaag aggggaaaat cgacaacgca gcgtcggtca
    11281 tcgctttgca atggctgcag ctgcatcatc aagcgttaaa aaatgagtgg gcataaatga
    11341 agcgttacac acctgacttt cctgaaatga tgcgcctgtg cgagatgaac ttttcacaat
    11401 tgcgccgttt gttaccgcgc aatgacgcac ccggcgaaac tgtaagctat caggtggcaa
    11461 acgcacaata tcggctgacg attgtggaat cgacccgata cactaccctg gtgacaatag
    11521 aacagactgc gcccgcgatc agttactgta gccttccgtc aatgacggtg cgtctgtatc
    11581 atggcgcgat ggtggctgaa gtgtgttcaa gccagcagat ttttcgcttc aaagcgcggt
    11641 atgattatcc taataaaaag ttgcatcaac gcgacgaaaa gcatcaaatt aaccagtttt
    11701 tagcggactg gttgcgatac tgtttagcac atggagcgat ggcgattccg gtttactagc
    11761 atcgtgaaac ctaaggacac catttggaaa gcctgttaac ccttcctctg gctggtgagg
    11821 ccagagtcag gattttacaa attaccgaca ctcacctgtt tgcacaaaag cacgaagctc
    11881 tgttaggggt aaacacctgg gaaagctacc aggcggtgct ggaggcgatt cgtccacatc
    11941 agcacgaatt cgacctgatt gtcgcgacag gtgatttagc gcaggatcaa tcctctgcgg
    12001 cctatcagca tttcgctgaa ggcatcgcaa gttttcgtgc gccctgcgtc tggctgccgg
    12061 gcaaccacga tttccagccc gcgatgtaca gcgcgttaca ggatgcgggt atctccccgg
    12121 cgaagcgggt gtttattggt gagcaatggc aaatcctgtt gctggatagc caggtgtttg
    12181 gcgtgccgca cggtgagctg agcgagtttc agcttgagtg gctggaacgt aaactggccg
    12241 atgcgccaga acgccatacg ttgctactgc tgcatcatca tccgctacct gcgggttgta
    12301 gttggctcga tcaacacagt ctgcgtaacg cgggcgaact ggataccgtg ctggcgaagt
    12361 ttccgcacgt caaatacttg ctgtgcggtc atattcatca ggagctggat ctcgactgga
    12421 acggtcgccg cctgctggca acgccgtcga cctgtgtgca gtttaagccg cactgttcca
    12481 actttacgct ggatactatc gcgcccggct ggcgtactct cgagttacat gctgatggca
    12541 cgctgaccac cgaggtgcat cgcctggcgg acacacgttt ccaacctgat accgcttcag
    12601 aaggctactg atgtctacgc ttctttattt acacggtttc aacagctcgc cgcgctctgc
    12661 aaaagcgagc ttgttaaaaa actggctggc ggaacatcac cctgacgttg agatgatcat
    12721 tccgcagttg ccgccgtatc cttccgacgc ggcagaactg ctggaatcca ttgtcctgga
    12781 acatggcggc gattcgctgg gtattgtcgg ttcgtcactg gggggatatt acgccacctg
    12841 gttgtcgcaa tgttttatgc tgcccgcagt ggtggtaaac ccggcggtac gcccgtttga
    12901 attgctgacg gactatctcg gtcagaacga gaacccctac accgggcagc aatatgtgct
    12961 agagtcacgc catatttacg atctcaaagt catgcagatt gacccgctgg aagcgccgga
    13021 tttgatctgg ctgctacaac aaacgggaga tgaagtgctg gattaccgcc aggcggtggc
    13081 gtactacgct tcctgccgcc agactgtcat agaaggcggc aaccacgcat tcacgggctt
    13141 cgaagattat ttcaacccga tcgtcgattt tcttggtctg caccatctct gacgatcaac
    13201 tcgaattgct aacttaaacc atgacgcaaa cttataacgc tgatgccatt gaggtactca
    13261 ccgggcttga gccggttcgc cgccgtccgg ggatgtatac cgataccact cgccctaacc
    13321 atttggggca agaagttatt gataacagtg tcgatgaagc actggcgggt cacgcaaaac
    13381 gcgtggatgt aatcttacat gctgaccagt cgttagaagt tattgacgat gggcgcggga
    13441 tgccggtgga tattcacccg gaagagggtg taccggcggt tgaactgatt ctttgccgtc
    13501 tgcatgcagg cggtaaattc tctaacaaaa attaccagtt ctctggcggc ctgcatggcg
    13561 tggggatttc ggtggttaac gccctgtcga agcgcgtaga agttaacgta cgccgcgatg
    13621 gtcaggttta taacatcgct tttgaaaatg gcgaaaaggt gcaggattta caggttgtcg
    13681 gcacttgcgg taaacgcaat accggtacca gcgtgcactt ttggccggat gaaaccttct
    13741 ttgacagccc gcgattttct gtttcacgcc tgacgcatgt gctgaaggcc aaagcagtac
    13801 tgtgccccgg tgttgagatt acctttaaag atgagatcaa caacaccgaa cagcgctggt
    13861 gctatcagga cggtctgaat gattacctgg cggaagcggt aaacggttta ccgacgctgc
    13921 cagaaaaacc gtttatcggt aatttcgctg gcgatactga agctgtggac tgggcgctac
    13981 tgtggctgcc ggaaggcggt gaactgctga ccgaaagcta cgtcaacctg atcccaacga
    14041 tgcagggcgg tacccatgtt aatggcctgc gtcagggctt gctggacgcg atgcgtgagt
    14101 tctgtgaata tcgcaacatt ctgccgcgcg gcgtgaagct gtcggcggaa gatatctggg
    14161 atcgctgcgc ctatgttctg tcggtgaaaa tgcaggatcc gcagtttgcc gggcagacga
    14221 aagagcgtct ctcttcgcgt caatgcgcgg cattcgtttc aggcgtggtg aaagatgcct
    14281 ttatcctgtg gctgaaccag aacgttcagg cggcggagtt gctggcagag atggcgattt
    14341 ccagcgccca gcgtcgtatg cgtgcggcta aaaaagtggt gcgtaaaaag ctgaccagcg
    14401 gcccggcgct gcctggcaaa ctggctgatt gtaccgcgca ggaccttaac cgtaccgaac
    14461 tgttcctcgt ggaaggtgac tccgcaggcg gatctgccaa gcaggcgcgc gatcgtgaat
    14521 atcaggcgat catgccgctg aaaggtaaga tccttaacac ctgggaagtt tcttccgacg
    14581 aagtgctggc ctcgcaggaa gtgcatgata tttcggtcgc gatcggtatc gatcctgaca
    14641 gcgacgatct gagccagctt cgttatggca aaatctgtat cctcgcggat gcggactctg
    14701 atggtctgca cattgccacg ctgctctgcg ctttgttcgt aaaacacttc cgcgcgttgg
    14761 tgaaacacgg tcacgtttac gtcgcactgc caccgctcta ccgtattgat ctcgggaaag
    14821 aggtttatta cgcgctgacg gaagaagaga aagagggcgt acttgagcaa ttaaaacgca
    14881 agaaaggcaa ggcgaacgtc cagcgtttta aaggtctggg ggaaatgaac ccgatgcaat
    14941 tgcgtgaaac cacgcttgat ccgaacactc gccgtctggt gcagttgact atcgatgatg
    15001 aagacgatca gcgtactgac gcgatgatgg atatgctgct ggcgaagaaa cgctcggaag
    15061 atcgccgcaa ctggttgcaa gagaaaggcg acatggcgga gattgaggtt taaaggaaag
    15121 aacattgccc ggtcaggatg gccgggcaaa caaggcaggt ttaaatccct ggctgcagaa
    15181 tacgaatatt catctccagc acgtcacctt ttacggcttc gctatacgcc ttcatgtgcg
    15241 gggtttgcag atgcgcttca agatgcgcga tgctttccca ctgctcaatc atcacgatag
    15301 aatccggtgc catagactgg aaactcacgc cagcagcgca atccaccatt ggcgcatagc
    15361 cgtggcaacc ttcttctttc agtacggttg gaacgatttt agcaaactga tccaataccg
    15421 cctgacggtg atgttgacca ggacgagtac ggatttctgc gattacggta agcatggtta
    15481 actccttcta aagcctgagc tctagttaac caaaaatttc cacaagatgc ttgcgatatt
    15541 cttcagtata gtggggaaca tcaggcattt ttatcacgtc attagcgata aatgtcggca
    15601 gcggttctat accgaggaat tggtttgctt tatggaacgg cagatacaca ccgtcaacgc
    15661 caacgccgtg gaagaactga tctttttcgg tgaaggcttc cattggtgcg ttccaggtca
    15721 gagaaagcat atattttttg ccctgtacca ggccgccgga accgtatttt ttcgacggat
    15781 ctttgcgggt acgaccatcg ctagcataca gcgtcccgtg accttcggtg aatacatcat
    15841 caatgtattt tttcactgtc cacggcgcgc ccatccacca gcctggcatc tgccagatca
    15901 ccacatcagc ccagagaaag ttttgtactt ccgctttgac atcgtagtcg ctgtcggcgc
    15961 gaacgatgcg aacatcatgc ccgaggtcgc gcagtgtgcc atccgcgact tcggtcaggg
    16021 tgtcgttcag ttgaccattg gagtgggcga attttttcgc gccgttgata atcaggatgt
    16081 tgctcatttt ttaacctcaa ggtgagacgt ttgtcgacta tagtacgtca cagagcggta
    16141 cggtgaaatt agcaaaatgt gcaaagtctt ttgcgaattt agcaaaagtc tgatctagct
    16201 ctgactcacc gatgcaggat aaatattttc tgaaaatgac aatactgata gccattcctc
    16261 ataattctta ctcgtaccgg aataatttac acgtttggtt cggttttttt ggggattgaa
    16321 aatatggctt tgaataagta aaagtgaaaa tatcaacgtg tcatgttgat aattataaat
    16381 ggatttttat gagcgtactg atatatgtta aagcagaaaa ttaaaacaat atttgaagca
    16441 ttgttatata taatgcttac ttattggtta atagattctt tttttgcttt caataagtat
    16501 gactggatgc ttgagtcggg aggcaatatt tgcagtatac cttccgtttc aggcgaagat
    16561 cgtatattgc aagcaatgat tgcagcattt tttcttctta cgccacttat taattcttat
    16621 cttaagaaaa ctctttatgc gggaaatgtt cgagttttgg ctatatgtat tctcgctcgt
    16681 tatttgtctg gtttgtggtt ggtggctttt ttggggacgg tttatatttt gctattagta
    16741 aaatctatga gagtcgtttt aacggctctc atagacagag aagttaccag cttaccttcg
    16801 cctcaaatcc accttgttcc gcattcccaa actcaacatt catgtcatgc agcttggcga
    16861 ttcgctggac aatcgatagc ccaagtccac tgccggtagc ggtttgtccg ggtgggcgat
    16921 agaagcgttc gccaattcgc gccagtgcct ctggtgtcac accggggccg ttatccctca
    16981 cgatgaaatt atcagcattc agcgtgacgt ctatcacgct gccctgtgga ctgtagcgca
    17041 cggcgttatc cagcaaattt cgcaccaaca aacttagcaa tagcggttgt ccggtgcgtt
    17101 tgatgccgtg ggcattgagt gtcagtcgca cgtcaatttt cgcctgctgc gccgtgtggt
    17161 aaatatccat caccgacgat tgcaggagat cttcaagcgg gatctccgcg acgtcctgaa
    17221 ggttatccag tgagtccagc cgcgatagcg tgagcagttg atcaaccaga cgagtagcgc
    17281 gatcgatccc ggaatgtaat tgaagcagtg cttttttccg cgcctgcgga tcatcgtcag
    17341 agagctgcgc aacttcggtt tgcactttca gcgccgttaa cgggctacga agttcgtgag
    17401 ctgcgtcgga ggtaaagcgt cgttcacgaa ccatcatcgc atgtgtgcgg gcaaacagtt
    17461 gatttagcga ctcaaccagt ggacgcactt cgctgggtac gccagtcgcg tttagtggtt
    17521 tttccgagtc agggtcacgc atacgcagcg ccagcgccag tttgttcagc ggcgagagtt
    17581 cacgacccaa tagtaccatc atgatgatta acataatcgg cagtgcgacc agccacggga
    17641 tcaattgccc ggcaacaatc gccagcgcca tgtcttcacg gtattcccat tcctgaccaa
    17701 caacgatgcg atagttgcca tcaggtgagg tcatccagac aaaacgccat tgatctttat
    17761 cgcccaccag ttgcccgtca gcaaaacctt cccgttgata gctataggga atatcttctc
    17821 cgttatcgcc atcgttaagg accattctgc cgtcgtgggt aaagatggca aaggtcagcg
    17881 catcgtcatc aacatgaccg tgttttaatt tattaggcgt ctgtgccatg cgatccgccg
    17941 cgttgatttc gttgagatcg agcgtactta accgcttggc aaacagcatc agttgggtgt
    18001 cgaacaactc atcgacgtta tccgttgttt gtttccaggc gacaaagctg gaaagcagcc
    18061 aggtcaccga ggccagaatt aaaaagatta gcgtcagcct gacgcgcaga ctaagacgtt
    18121 gggtaaattt catttctcac ctaatgtgta gccaatcccg tgaacggtac gaataaaatc
    18181 actaccgagt ttgcgtcgca gatgatgcac atgtacttca acggcattac tggtgacctc
    18241 ttcgtcccag gtatacagtt tctcttcaat cagcttgcgc ggcagtaccc gaccggcgtt
    18301 acgcatcagt aattccagca gggcaaattc ttttggtttc agcgttaagg gttcgccagc
    18361 cagcgtggcg atacgtttgc cggggtcgag catgacgtta ccgtggcgca gctcgttgct
    18421 ggcctggccg ttggttcggc gcatcagagc ttccagcctg gcggcgactt ctatcaacgc
    18481 aaaaggttta cacagataat cgtcagctcc cagacgcagc ccctctacac gttccgctaa
    18541 cgcatcgcgc gcggtcagga tcagtaccgg ctcacgctga cctttctctc gccattcgcg
    18601 caaaatatcg cgaccatcca tgcctggtaa ggttaaatcc aggatcaccg catcataagg
    18661 tgcgctatat agcgcctctt ttccctgacg accttgtgta aaccagtcga cgctaaaacc
    18721 cattttacta aggcccgttt tgatgccgtc gccaatcagc atgtcatctt ctatcagtaa
    18781 aattcgcatt ttttcatccc tgcgataacc gtatttgctg ccagtaaacc gtgttgtaac
    18841 gcgctctgta cagcattaaa ttttattttt tcccttaaga agttgttaag gactatcttg
    18901 ttaaatgctc ggaaacagac attaaaggga gtaataaaca tgaaaaaatt cgcagcagta
    18961 atcgcagtaa tggccctgtg cagcgcaccg gtgatggcag cagagcaggg cggtttttct
    19021 ggcccatcgg caacgcaaag tcaggccgga ggattccagg ggccgaacgg cagcgtaacg
    19081 actgtagaaa gcgcaaaatc cctacgtgac gacacctggg taactctgcg cggcaatatc
    19141 gttgaacgca tctctgacga tctctacgtg ttcaaagatg ccagcggtac tatcaatgtt
    19201 gatatcgatc acaaacgctg gaacggcgtg acggtgacgc cgaaagatac ggttgagatt
    19261 cagggtgaag tcgataaaga ctggaattct gttgaaattg acgtcaaaca gatccgcaaa
    19321 gtaaatccgt aattgttact gctcccggga cgcgttcccg ggaataattt cgcagggagg
    19381 caaaatgaca aacctgacac tggatgtaaa cattatcgat ttcccatcaa tccctgtggc
    19441 gatgttgccg caccgctgta gccctgagtt gctcaactac agtgtggcga aatttatcat
    19501 gtggcgtaaa gagacggggc tttctcctgt taaccaaagc cagacttttg gcgtcgcttg
    19561 ggacgaccct gccaccaccg caccggaagc gtttcgcttt gatatctgcg gcagcgttag
    19621 cgaaccgatt cccgataatc gttatggtgt gagcaatggt gaacttaccg gtggacgtta
    19681 tgccgtggcc cgccacgttg gcgagctgga cgatatttca cacacgatat ggggcattat
    19741 tcgccactgg ctgcctgcaa gcggcgagaa gatgcgtaaa gcaccgattc tgtttcacta
    19801 caccaatctt gccgaagggg tgacagagca gcgactggaa acggatgttt atgtgccgtt
    19861 agcgtgatgg ggaatcttta ccggagtgtg agccaaatca ctcgcgataa gtttgagcga
    19921 acaatgccac aggcgtattg ttgttgggct tataatttct ccggtaagga ataccatgta
    19981 tacgcgaaat ttattatggc tggtcagcct ggtaagtgcg gctcctctct acgctgctga
    20041 cgttcccgcc aacacacagc tcgccccgca acaagtcttt cgttacaaca atcatagcga
    20101 cccaggtacg ctcgacccgc aaaaggtgga ggagaatact gctgcgcaga ttgtgctgga
    20161 tctgtttgaa ggtctggtat ggatggacgg tgaaggccag gtgcagcccg ctcaggctga
    20221 acgctgggag atactggacg gcggcaggcg ctatattttc catctgcgta gcggtttgca
    20281 gtggtcagac ggtcagcctc tgacggcaga ggattttgtc ctcggctggc agcgcgcggt
    20341 tgacccgaaa acggcaagcc cttttgctgg ctatctggca caggcgcaca ttaacaatgc
    20401 cgcggctatt gttgcgggta aagcagatgt tacatcgctg ggtgtcaaag cggcggatga
    20461 tcgtactctt gaagttacgc ttgagcagcc ggttccttgg ttcacgacga tgctcgcctg
    20521 gccgacgctg ttcccggttc ctcatcatgt catcgctaaa catggcgata gctggagtaa
    20581 gccagagaac atggtttaca acggtgcctt tgtgcttgat cagtgggtag ttaacgaaaa
    20641 gattactgca cgcaaaaatc caaagtaccg cgatgcgcaa catacagtat tgcaacaggt
    20701 tgagtatctg gcgctggata attcggtcac cggctataac cgctatcgcg cgggagaggt
    20761 cgatctcacc tgggttccgg cgcagcaaat tcccgccatt gaaaaatcac tgcctggcga
    20821 gctacgaatt atcccgcgtc tgaacagtga atattacaac tttaaccttg agaaaccgcc
    20881 atttaacgat gtgcgggtgc gtcgggcgct atatcttacg gttgatcgac agcttattgc
    20941 gcaaaaggta ctggggttga gaacgcccgc aaccacgctg acgccgccag aggtaaaagg
    21001 ctttagcgcg acgacgttcg atgaactgca aaagccaatg agtgagcgcg tcgcgatggc
    21061 aaaagccttg ctgaaacagg cgggatacga cgcctctcat ccgctacgct ttgagctgtt
    21121 ctacaacaag tacgatctgc atgaaaagac ctcgatagcg ttgtcttccg aatggaaaaa
    21181 atggctgggt gcacaggtga cgctgcgcac aatggagtgg aaaacttatc ttgatgcccg
    21241 acgagccggt gatttcatgc tgtctcggca gtcgtgggat gcgacgtata atgatgcttc
    21301 cagctttctg aacacgttca aaagcgatag tgaagaaaac gtcggtcact ggaaaaatgc
    21361 gcagtatggc gccttactaa accaggccac gcagatcact gatgcgacaa agcgtaatgc
    21421 gttgtatcag caagcagaag tgatcatcaa ccaacaggca ccgctgattc ctatctacta
    21481 tcagccgtta atcaaactgc ttaaacccta cgttggcggt tttccgctgc ataatcccta
    21541 ggattatgtc tacagcaaag agttgtatat caaggcacat tgatgccttt atcgccgtcg
    21601 gagcacgtcc ggcggcgcta ttcacgctga tctcctgtga ctcgacgcgg cagataatgt
    21661 agtatctccg gcaatattgc ccctttgaag gctggcgaat aagttgagga atcagaatta
    21721 atgagcgata tggcagagcg ccttgcgcta catgaattta cggaaaacgc ctacttaaac
    21781 tactccatgt acgtgatcat ggaccgtgcg ttgccgttta ttggcgatgg tctgaaacct
    21841 gttcagcgcc gcattgtgta tgcgatgtct gaactgggcc tgaatgccag cgccaaattt
    21901 aaaaaatcgg cccgtaccgt cggtgacgta ctgggtaaat accatccgca cggcgatagc
    21961 gcctgttatg aagcgatggt cctgatggcg cagccgttct cttaccgtta tccgctggtt
    22021 gatggtcagg ggaactgggg cgcgccggac gatccgaaat cgttcgcggc aatgcgttac
    22081 acagaatccc ggttgtcgaa atattccgag ctgctattga gcgagctggg gcaggggacg
    22141 gctgactggg tgccaaactt cgacggcact ttgcaggagc cgaaaatgct acctgcccgt
    22201 ctgccaaaca ttttgcttaa cggcaccacc ggtattgccg tcggcatggc gaccgatatt
    22261 ccaccgcata acctgcgtga agtggctcag gcggcaatcg cattaatcga ccagccgaaa
    22321 accacgctcg atcagttgct ggatatcgtg caggggccgg attatccgac tgaagcggaa
    22381 attatcactt cgcgcgccga gatccgtaaa atctacgaga acggacgtgg ttcagtgcgt
    22441 atgcgcgcgg tgtggaagaa agaagatggc gcggtggtta tcagcgcatt gccgcatcag
    22501 gtatcaggtg cgcgcgtact ggagcaaatt gctgcgcaaa tgcgcaacaa aaagctgccg
    22561 atggttgacg atctgcgcga tgaatctgac cacgagaacc cgacccgtct ggtgattgtg
    22621 ccgcgttcca accgcgtgga tatggatcag gtgatgaacc acctcttcgc taccaccgat
    22681 ctggaaaaga gctatcgcat taacctcaat atgatcggtc tggatggtcg tccggcggtg
    22741 aaaaacctgc tggaaatcct ctccgaatgg ctggtgttcc gccgcgatac cgtgcgccgc
    22801 cgactgaact atcgtctgga gaaagtcctc aagcgcctgc atatcctcga aggtttgctg
    22861 gtggcgtttc tcaatatcga cgaagtgatt gagatcattc gtaatgaaga tgaaccgaaa
    22921 ccggcgctga tgtcgcggtt tggccttacg gaaacccagg cggaagcgat cctcgaactg
    22981 aaactgcgtc atcttgccaa actggaagag atgaagattc gcggtgagca gagtgagctg
    23041 gaaaaagagc gcgaccagtt gcagggcatt ttggcttccg agcgtaaaat gaataacctg
    23101 ctgaagaaag aactgcaggc agacgcgcaa gcctacggtg acgatcgtcg ttcgccgttg
    23161 caggaacgcg aagaagcgaa agcgatgagc gagcacgaca tgctgccgtc tgaacctgtc
    23221 accattgtgc tgtcgcagat gggctgggta cgcagcgcta aaggccatga tatcgacgcg
    23281 ccgggcctga attataaagc gggtgatagc ttcaaagcgg cggtgaaagg taagagtaac
    23341 caaccggtag tgtttgttga ttccaccggt cgtagctatg ccatcgaccc gattacgctg
    23401 ccgtcggcgc gtggtcaggg cgaaccactc accggcaaat taacgttgcc gcctggggcg
    23461 accgttgacc atatgctgat ggaaagcgac gatcagaaac tgctgatggc ttccgatgcg
    23521 ggttacggtt tcgtctgcac ctttaacgat ctggtggcgc gtaaccgtgc gggtaaggct
    23581 ttgatcacct taccggaaaa tgcccatgtt atgccgccgg tggtgattga agatgcttcc
    23641 gatatgctgc tggcaatcac tcaggcaggc cgtatgttga tgttcccggt aagcgatctg
    23701 ccgcagctgt cgaagggcaa aggcaacaag attatcaaca ttccatcggc agaagccgcg
    23761 cgtggcgagg atggtctggc gcaactgtac gttctgccgc cgcaaagcac gctgaccatt
    23821 catgttggga aacgcaaaat taaactgcgt ccggaagagc tacagaaagt cactggcgaa
    23881 cgtggacgcc gcggtacgtt gatgcgcggt ttgcagcgta tcgatcgtgt tgagatcgac
    23941 tctcctcgcc gtgccagcag cggtgatagc gaagagtaat atgccgggga gggcgctgtt
    24001 tcctcccgct agcaaggaac gccggatgaa acgttaagtc gtcatccggc agcgtattca
    24061 acccccggaa acgataaaaa ttcccttgaa accgttgttt attcatgcgt tgcgattaac
    24121 aatacgcttt tccagagagc ggcttttaac aatgccctaa cctgatttca ggtgacgtac
    24181 aatgccagtc tctcagacct tcagagggtg ttatgctata tatctttcgt cttattatta
    24241 ccgtgattta cagcatctta gtctgtgtat tcggctccat ttactgcctt ttcagcccgc
    24301 gtaacccgaa acatgtggcc acctttgggc atatgtttgg ccgtcttgcg ccgctgttcg
    24361 gcctgaaagt tgagtgccgc aaacctgcag atgctgaaag ctacggcaat gctatctata
    24421 tcgctaacca ccagaacaac tatgacatgg tgacagcatc gaacattgtg caaccgccga
    24481 cggtgacggt aggtaaaaag agcttgctgt ggctcccctt cttcgggcag ttgtactggt
    24541 taaccggcaa cttattgatc gacagaaaca atcgcactaa agctcacggc accattgcgg
    24601 aagtcgtgaa tcatttcaaa aaacgccgta tttccatctg gatgttcccg gaaggaaccc
    24661 gcagccgtgg tcgcggcctg ctaccgttca agactggagc atttcacgcg gcaattgcgg
    24721 cgggcgtccc gattattccc gtgtgcgtct ctacaacttc gaataagatt aatcttaatc
    24781 gactgcacaa cggtctggtg attgtcgaaa tgctgccgcc aattgacgtc agtcagtatg
    24841 gcaaagatca ggttcgtgag ctggctgccc attgtcgttc gataatggaa caaaaaatct
    24901 ccgagctcga taaagaagtc gcagaacgcg aagccgccgg aaaagtttaa gtcggcaatc
    24961 tgtatttttg cggggaacac tttcctgcac ggtattactt tagccagttt tacatggagc
    25021 aaatatgtca ctcagtcggc gtcagttcat tcaggcatcg gggattgcac tttgtgcagg
    25081 cgctgttccc ctgaaggcca gcgcagccgg gcaacagcaa ccgctacccg ttccgccgct
    25141 acttgaatct cgccgtgggc aaccgctgtt tatgactgta caacgtgcgc actggtcatt
    25201 tacgccaggg acacgcgcgt cggtctgggg aatcaatggt cgttacctgg ggccgactat
    25261 ccgcgtctgg aagggcgacg atgttaagct tatttacagc aaccgcctga cagaaaatgt
    25321 ctcaatgacg gtggccgggc tacaggtacc aggcccgctg atgggcggtc cggcacggat
    25381 gatgtcgcca aacgctgact gggcacccgt actgcctatt cgccagaacg cagctactct
    25441 gtggtatcac gccaatactc ccaaccgcac ggctcagcag gtctataacg gccttgccgg
    25501 aatgtggctg gtggaagatg aagtcagcaa gtcgctgcct atccccaacc attatggtgt
    25561 ggatgatttt ccggtcatta tccaggataa acggctggat aactttggta cgccagaata
    25621 caacgaaccg ggaagcggcg gctttgttgg tgatacgctg ctggttaacg gtgtacaaag
    25681 cccgtacgtt gaagtctcgc gtggctgggt gcgcttgcga ctgctgaacg cgtcgagctc
    25741 tcgtcgctat caactacaga tgagcgatgg tcgtccgtta catgtgattt ctggcgatca
    25801 gggattcctg cctgctcctg tatcggtgaa gcaactttcg ctggcaccgg gcgagcgccg
    25861 cgagattctg gtggatatga gcaacggcga tgaagtgtcg atcacctgtg gcgaagcggc
    25921 gagcattgtt gatcgtattc gcggcttctt tgagccatcc agtattctgg tttctaccct
    25981 ggtgctaacg ctgcgcccaa ccggccttct gccgctggtc acagacagtc ttccgatgtg
    26041 cttgctgcca actgaaatca tggccggttc gccgattcgc agtcgcgata tcagtctggg
    26101 tgatgacccg ggtattaatg gacaactgtg ggacgtcaac cgtattgatg tcaccgcgca
    26161 gcaaggaacg tgggaacgct ggacggtacg cgcgaacgag ccgcaagcgt tccatattga
    26221 aggcgtgatg ttccagatcc gtaacgtgaa tggcgcgatg ccgttcccgg aagacagagg
    26281 ctggaaagat accgtttggg ttgacggaca agtggagctg cttgtttatt tcggtcagcc
    26341 ttcctgggcg cacttcccgt tctacttcaa cagtcagacg ctggaaatgg cggaccgtgg
    26401 ctcgattggg caactgttag tcaatccggt accgtaatct tcatactcgc ccgaggaggg
    26461 cgagtatgga atacctttcg atttctcttt cgttccggct tataatcccc ggcctttgat
    26521 tattttttta tcatttctgg aagcaaaatg agctctatct ccctgatcca accggatcgc
    26581 gacctgttct cctggccgca gtactgggcc gcctgttttg gaccggcacc gtttttgccg
    26641 atgtctcgtg aagagatgga tcaacttggc tgggatagct gcgacatcat tttggttact
    26701 ggcgacgcgt atgtcgatca cccaagcttc gggatggcga tttgcggtcg tatgctggaa
    26761 gcgcagggct ttcgcgtcgg gatcatcgcc cagccggact ggagcagcaa agacgacttt
    26821 atgcgtctgg gtaaaccgaa tctgtttttt ggtgttactg ctggcaacat ggattcgatg
    26881 atcaaccgct ataccgccga tcgccgttta cgtcatgatg atgcctacac gccagataat
    26941 gtcgcgggta agcgaccgga tcgcgccacg ctggtttata cccagcgttg taaagaggcg
    27001 tggaaagatg tgccggtgat cctcggcggt attgaggcta gcctgcgccg taccgcgcat
    27061 tatgattact ggtccgatac cgtgcgccgt tccgtgctgg tagattcgaa agccgacatg
    27121 ctgatgtttg gtaacggtga acgtccgctg gtggaagtag cgcatcgtct ggcgatgggc
    27181 gagccgatta gtgaaatccg cgatgtgcgt aataccgcaa ttatcgtaaa agaggcgctg
    27241 cctggctgga gcggtgtgga ttccacccgt cttgataccc cagggaaaat cgacccaatc
    27301 ccgcatccgt atggcgaagg tttgccgtgt gcggataaca aacctgttgc gccgaaaaag
    27361 caggaagcga aagctgtaac cgtgcagcca ccgcgcccga aaccgtggga aaaaacctac
    27421 gtattgctgc cttctttcga gaaagtgaag ggcgataaag tgctgtacgc ccatgcttcg
    27481 cgcattctgc accacgaaac caacctaggc tgcgcccgcg cattgatgca aaaacacggt
    27541 gaccgctatg tgtggatcaa cccgcctgct atcccgcttt ctaccgaaga gatggacagc
    27601 gtttttgcgc tgccgtacaa gcgcgtgcca catccggcct atggcaatgc ccgtattccg
    27661 gcttacgaaa tgatccgttt ttcggtcaac attatgcgcg gctgctttgg cggctgttct
    27721 ttctgttcta ttaccgagca cgaagggcgc attattcaga gccgttcgga agattcgatc
    27781 attaatgaga tcgaagcgat ccgcgacacc gttccaggtt ttacgggcgt gatttccgat
    27841 ctcggtgggc caactgccaa catgtatatg ttgcgctgca aatcgccacg cgctgagcaa
    27901 acctgccgtc gtttgtcgtg cgtttatccg gatatttgtc cgcacatgga cactaaccac
    27961 gaaccgacga tcaacctcta tcgccgtgcg cgtgatctga aaggcattaa aaaaatcctc
    28021 atcgcctcag gcgtacgtta tgacatcgcc gtggaagatc cgcgctatat caaagagttg
    28081 gcgacccatc acgtcggcgg ttatctgaag attgctccgg aacataccga agaagggccg
    28141 ttgtcgaaga tgatgaagcc gggcatgggc agctatgacc gctttaaaga gctgttcgat
    28201 acttactcga aacaggcagg taaagagcag tatctgatcc cctatttcat ctccgcgcac
    28261 ccgggtacgc gtgatgaaga tatggtgaat ctggcgctgt ggctgaaaaa gcatcgtttc
    28321 cgtctcgacc aggtacagaa cttctaccca tcgccgctgg ctaactcgac caccatgtat
    28381 tacaccggga aaaacccgct ggcgaagatt ggttataaga gtgaagacgt ctttgtaccg
    28441 aagggcgaca aacagcgtcg tttgcataaa gcgttgttgc gttaccacga tccggcaaac
    28501 tggccgttaa tccgccaggc gctggaagcg atgggcaaaa agcatctgat tggcagccgt
    28561 cgcgattgct tagtgcctgc gccaaccatt gaagagatgc gtgaggcttg tcgtcagaac
    28621 cgcaatactc gtccggcgtt gacgaaacat acgccgatgg cgacccagcg tcagacgcct
    28681 gcgacggcaa aaaaagcgtc gtctacgcaa tctcgtccgg tgaatgctgg ggcgaagaaa
    28741 cgccctaaag cggcggttgg acgttaaaaa aaatccccgg caactgacat gctaccgggg
    28801 atttttttat cattctgcgt acatacgcaa gcagcgcagg caatcaaaat agtcctgagc
    28861 atcaagacgc gtattggctc tgttagcttc ggatttggca gcatagattt gtgggcgtag
    28921 tgcttttata tcctgctcaa gccgggcgat tttggcattt aatgtttgta cattgctcgc
    28981 cagttgattg accttttgct cattgacgca gccactgagc aagcaggttg ccagaacaac
    29041 agctcccacg gtgaaaatcg ttttcatata gtgttccctt ttatttattg ttccggctaa
    29101 ttgttattta attcagctca ttgctttaat ctggcggcgg tttttgcctc aatctgctta
    29161 agtaggctgc cgctgttcgg gcggataaaa tcagcgattt cccacttacc ttcgcgccgc
    29221 tgtaaaacca gctcttgctc ttcgttgttg ccattggtca gcgtaaaacg aacatgaatg
    29281 cgggcggaat cggcggtttt ctccaggact cgaatttcat caacgcgtga aaatagcgac
    29341 tcttcgccaa aacagatcgg attgtcgtaa ataaattgcc gttctatttg catatcttca
    29401 tcgggattat tggccgtctt gaaggtggtt ttatagaagg cattaaccgc ctggcggtaa
    29461 gagtcggaaa ccacccacgt ccacggccag ctataatcag caatatgttc aaagagttcg
    29521 gcaacaaagg cttccggctg ttctttttgc aacgaagcta aagcggccag cgttttttca
    29581 ttctcgctat taactgcttg taagacgctg ccatgattgc tgacaatatc gtcaatgacc
    29641 caacgaccat tttccgccac cattttcagt gtctgcgtgg tcttttcttt atcatcttta
    29701 aagatacgaa agcgcacaac ggcatcggca tgatcggcgt cagtttgagt tatcgctacg
    29761 ctttctaaca ccagatcgcc aaaatcctga caatcacaaa ccggatcata atccagccag
    29821 ccaatattgc ccggcagcgt aagattgtcg ttcagggtaa gcgcctgttg aatacgcgca
    29881 gaagttatcg cccgctctcc ggtttcacca aaataagggg cagtggcatc tgatttatag
    29941 ttcttataaa tatgccggac tgtttgttct acggtctgtg aggggggctg tgcgtgtacg
    30001 gtaaaacttg ccagggctgc taaaaacaga agtattattt tcatctgttt ttcacctctc
    30061 cgttgcgttt atcccggata tagatgagtt gttcttttaa gagcttccgg ctctgcatga
    30121 tgatgtcctt atatttggca ttcctgaaca aggaagagta acaacgggcg ggacgcgagg
    30181 ggaataaatg atttctgaaa agtccggtag cggaacatta ccgccaccgg gagaatttgc
    30241 acgttagccg ccgaactggt caggatcggg accgagacgc ttgccctgat cgagttttgc
    30301 aatttcgccg agttcgtctt tgtcgagacg gaaatcccag acatcaaagt tttcgacaat
    30361 gcgtgaaggt gtgaccgatt tcgggatcac caccaggccg ctatccagat gccagcggat
    30421 aacaatctgc gccggggttt tgccatattt atctgccaga tcgcgaatga ctttctgatc
    30481 gaaaacgcct ttccctcctt gcgctaatgg gctccaggat tcggtctgga ttttgtgtgt
    30541 cgcgttccag gcatgtagct ggcgttgttg catcagcggg tgaagttcga tctgattaat
    30601 aacaggcgtc acgccagttt catcaatcag gcgttgcagg tgatggatct ggaagttgca
    30661 cacgccgatg cttttgatta atccctcttt ttgcaattcg atcatgcctt tccatgcttc
    30721 gacataatgg tcgatagcgg gaacgggcca gtgcattaag tagaggtcga tataatcaag
    30781 ctgtagtttt ttcaggctgt cgagcagggc tt
//
LOCUS       DAJVTL010000044        29943 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.044, whole genome shotgun sequence.
ACCESSION   DAJVTL010000044 DAJVTL010000000
VERSION     DAJVTL010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29943)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29943)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29943
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.044"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..208
                     /locus_tag="OQQ26_001865"
     CDS             <1..208
                     /locus_tag="OQQ26_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HCS1857333.1"
                     /translation="TGEASGSLDLMLDKLAHHHRDNTMALADNLAALLEPALLIITGG
                     IIGTLVVAMYLPIFHLGDAMSGMG"
     gene            complement(243..1286)
                     /gene="guaC"
                     /locus_tag="OQQ26_001866"
     CDS             complement(243..1286)
                     /gene="guaC"
                     /locus_tag="OQQ26_001866"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HCS1857334.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSW
                     SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS
                     TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
                     RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVLEQENRIFNNL"
     gene            complement(1442..1486)
                     /locus_tag="OQQ26_001867"
     CDS             complement(1442..1486)
                     /locus_tag="OQQ26_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857335.1"
                     /translation="MIIKTLKMSARKRN"
     gene            1511..2131
                     /gene="coaE"
                     /locus_tag="OQQ26_001868"
     CDS             1511..2131
                     /gene="coaE"
                     /locus_tag="OQQ26_001868"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HCS1857336.1"
                     /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
                     PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNDLLHPLIQQETQHQIQQ
                     ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTRKHVEQILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
     gene            2131..2874
                     /gene="zapD"
                     /locus_tag="OQQ26_001869"
     CDS             2131..2874
                     /gene="zapD"
                     /locus_tag="OQQ26_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HCS1857337.1"
                     /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIADHAGALHFF
                     RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL
                     ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
                     LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
                     KSRFAIRFMPLDSENGQVPERLDFELACC"
     gene            2884..3081
                     /gene="yacG"
                     /locus_tag="OQQ26_001870"
     CDS             2884..3081
                     /gene="yacG"
                     /locus_tag="OQQ26_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HCS1857338.1"
                     /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIPSNGDLSESDDWSEEPKQ"
     gene            complement(3180..3569)
                     /gene="mutT"
                     /locus_tag="OQQ26_001871"
     CDS             complement(3180..3569)
                     /gene="mutT"
                     /locus_tag="OQQ26_001871"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HCS1857339.1"
                     /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
                     TPEQAVVRELQEEVGITPQHFSLFEKLAYEFPDRHITLWFWLVESWEGVPWGKEGQPG
                     EWMSLVGLNADDFPPANEPVIAKLKRL"
     gene            complement(3629..6334)
                     /gene="secA"
                     /locus_tag="OQQ26_001872"
     CDS             complement(3629..6334)
                     /gene="secA"
                     /locus_tag="OQQ26_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HCS1857340.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNTINAMEPEMEKLSDEELK
                     GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
                     RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
                     RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
                     PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
                     RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
                     LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
     gene            complement(6396..6908)
                     /gene="secM"
                     /locus_tag="OQQ26_001873"
     CDS             complement(6396..6908)
                     /gene="secM"
                     /locus_tag="OQQ26_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308128.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HCS1857341.1"
                     /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPA
                     KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTL
                     PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ
                     GIRAGPQRLS"
     gene            complement(7138..8055)
                     /gene="lpxC"
                     /locus_tag="OQQ26_001874"
     CDS             complement(7138..8055)
                     /gene="lpxC"
                     /locus_tag="OQQ26_001874"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HCS1857342.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
                     FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVL
                     AKQEAWEYVTFQDDAELPLAFKAPSAVLA"
     gene            complement(8156..9307)
                     /gene="ftsZ"
                     /locus_tag="OQQ26_001875"
     CDS             complement(8156..9307)
                     /gene="ftsZ"
                     /locus_tag="OQQ26_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HCS1857343.1"
                     /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD"
     gene            complement(9368..10630)
                     /gene="ftsA"
                     /locus_tag="OQQ26_001876"
     CDS             complement(9368..10630)
                     /gene="ftsA"
                     /locus_tag="OQQ26_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HCS1857344.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHFN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(10627..11457)
                     /gene="ftsQ"
                     /locus_tag="OQQ26_001877"
     CDS             complement(10627..11457)
                     /gene="ftsQ"
                     /locus_tag="OQQ26_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HCS1857345.1"
                     /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
                     VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
                     LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
                     YGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMK
                     RLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
                     "
     gene            complement(11459..12379)
                     /gene="ddlB"
                     /locus_tag="OQQ26_001878"
     CDS             complement(11459..12379)
                     /gene="ddlB"
                     /locus_tag="OQQ26_001878"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HCS1857346.1"
                     /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
                     VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMSLPYTGSGVMASALSIDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMTKVVAE
                     NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPAGTFYDYEAKYLS
                     DETQYFCPAGLEASQEANLQALVLKAWMTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(12372..13847)
                     /gene="murC"
                     /locus_tag="OQQ26_001879"
     CDS             complement(12372..13847)
                     /gene="murC"
                     /locus_tag="OQQ26_001879"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HCS1857347.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
                     QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEF
                     PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
                     DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
                     APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
     gene            complement(13901..14968)
                     /gene="murG"
                     /locus_tag="OQQ26_001880"
     CDS             complement(13901..14968)
                     /gene="murG"
                     /locus_tag="OQQ26_001880"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HCS1857348.1"
                     /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
                     MEADLVPKHGIEIDFIRISGLRGKGIKALIAALLRIFNAWRQARAIMKAYKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
                     PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
                     GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
                     LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
                     AASIPDATERVANEVSRAARA"
     gene            complement(14965..16209)
                     /gene="ftsW"
                     /locus_tag="OQQ26_001881"
     CDS             complement(14965..16209)
                     /gene="ftsW"
                     /locus_tag="OQQ26_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HCS1857349.1"
                     /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSWEKDTDSLIMY
                     DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
                     PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI
                     ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     MLLRIDYETRLEKAQAFVRGSR"
     gene            complement(16209..17525)
                     /gene="murD"
                     /locus_tag="OQQ26_001882"
     CDS             complement(16209..17525)
                     /gene="murD"
                     /locus_tag="OQQ26_001882"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HCS1857350.1"
                     /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
                     DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGGNVGVGGNIGLPALMLLDDECELYVLELS
                     SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
                     MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
                     HVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
                     QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
     gene            complement(17528..18610)
                     /gene="mraY"
                     /locus_tag="OQQ26_001883"
     CDS             complement(17528..18610)
                     /gene="mraY"
                     /locus_tag="OQQ26_001883"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HCS1857351.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLVGYGIIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLVGKDTPATQL
                     VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
                     TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(18604..19962)
                     /gene="murF"
                     /locus_tag="OQQ26_001884"
     CDS             complement(18604..19962)
                     /gene="murF"
                     /locus_tag="OQQ26_001884"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HCS1857352.1"
                     /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
                     GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
                     ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP
                     LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
                     ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK
                     QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEAVRALQENG
                     TC"
     gene            complement(19959..21446)
                     /gene="murE"
                     /locus_tag="OQQ26_001885"
     CDS             complement(19959..21446)
                     /gene="murE"
                     /locus_tag="OQQ26_001885"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HCS1857353.1"
                     /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
                     HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKA
                     IDVNYHDSGATIRFSSSWGDGEIDSHLMGAFNVSNLLLALATLLALGYPLADLLKTAA
                     RLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
                     AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA"
     gene            complement(21433..23199)
                     /gene="ftsI"
                     /locus_tag="OQQ26_001886"
     CDS             complement(21433..23199)
                     /gene="ftsI"
                     /locus_tag="OQQ26_001886"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HCS1857354.1"
                     /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
                     LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALTTGDKNEFVINQGEGTGGRS"
     gene            complement(23215..23580)
                     /gene="ftsL"
                     /locus_tag="OQQ26_001887"
     CDS             complement(23215..23580)
                     /gene="ftsL"
                     /locus_tag="OQQ26_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HCS1857355.1"
                     /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(23577..24518)
                     /gene="rsmH"
                     /locus_tag="OQQ26_001888"
     CDS             complement(23577..24518)
                     /gene="rsmH"
                     /locus_tag="OQQ26_001888"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HCS1857356.1"
                     /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF
                     AKRIARAIVERNREQPMTRTKELAEVVAAATSVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPVGLPMTEEQLKKL
                     GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
     gene            complement(24520..24978)
                     /gene="mraZ"
                     /locus_tag="OQQ26_001889"
     CDS             complement(24520..24978)
                     /gene="mraZ"
                     /locus_tag="OQQ26_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020325403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HCS1857357.1"
                     /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
     gene            complement(25580..26584)
                     /gene="cra"
                     /locus_tag="OQQ26_001890"
     CDS             complement(25580..26584)
                     /gene="cra"
                     /locus_tag="OQQ26_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HCS1857358.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
                     SYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
                     "
     gene            complement(26666..26752)
                     /locus_tag="OQQ26_001891"
     CDS             complement(26666..26752)
                     /locus_tag="OQQ26_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fruR/shl operon leader peptide"
                     /protein_id="HCS1857359.1"
                     /translation="MRNLQPNMSRWAFFAKSVGTWNKSSCRG"
     gene            complement(26764..27255)
                     /gene="ilvN"
                     /locus_tag="OQQ26_001892"
     CDS             complement(26764..27255)
                     /gene="ilvN"
                     /locus_tag="OQQ26_001892"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HCS1857360.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
                     RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIRDVAKIVEVARSGVVGLSRGDK
                     IMR"
     gene            complement(27258..28982)
                     /gene="ilvI"
                     /locus_tag="OQQ26_001893"
     CDS             complement(27258..28982)
                     /gene="ilvI"
                     /locus_tag="OQQ26_001893"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HCS1857361.1"
                     /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID
                     HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ
                     VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD
                     LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAI
                     TAGCHQQLKETVEALNLPVVSSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI
                     FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLEL
                     LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT
                     SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS
                     IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA
                     EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
                     WLSKTERT"
     gene            29101..29145
                     /locus_tag="OQQ26_001894"
     CDS             29101..29145
                     /locus_tag="OQQ26_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857362.1"
                     /translation="MKRNDKILHYEGLN"
     gene            complement(29300..29943)
                     /gene="leuO"
                     /locus_tag="OQQ26_001895"
                     /pseudo
     CDS             complement(29300..29943)
                     /gene="leuO"
                     /locus_tag="OQQ26_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
BASE COUNT         7181 a         8451 c         7223 g         7088 t
ORIGIN      
        1 aacaggagag gcatccggct cgctggatct catgttagac aaactcgccc atcatcatcg
       61 ggataacaca atggcactgg cggataacct cgcagcctta ctggaaccgg cgttgctgat
      121 cataacggga ggaattatcg gtacgctggt ggtggcaatg tatctgccaa ttttccattt
      181 aggcgatgcg atgagtggga tgggataacg ctggcgtgtt gctccacgcc agcgttggga
      241 gattaaaggt tgttgaaaat gcggttttct tgttccagca cacgaataaa cgtggtgcgc
      301 ttggtcagtt ctttcaggcg tgaagcccca acgtatgtac aagctgaacg caagccgccc
      361 aaaatatcac gcgcggtatt ttcaaccggg cctcgcagcg gcagcttaac ggttttacct
      421 tctgctgcgc gatattccgc aacgccgcca acgtgacgtt tcatcgcaga ctcggagctc
      481 atgccgtaga acagcataaa tttctcgccg ttctcctcaa cgatgcgacc gccgctctct
      541 tcgtggcccg ccagcatgcc gccaagcatg acgaaatcgg caccgccgcc aaaggctttc
      601 gcgacatcgc ccggcgtggt gcagccaccg tcgctgacga tcattccgcc cagaccgtgc
      661 gccgcatcgg cacattcgat taccgcagaa agctgcggat aaccgacgcc tgttttgaca
      721 cgagttgtac aaacagaacc tgggccaatg ccaactttaa cgatatcagc accggagagg
      781 ataagctcct cacacatttc accagtcact acgttgccag cacaaatggt tttggtcggc
      841 cacgcttcac gcgctttcgc aacgaactgc acaaagtgtt cggaataacc attcgccaca
      901 tcaatacaaa cgaagtttaa tgccgggttc aggtcgagaa tctgtttagt tttttcgaaa
      961 tccgcatcag acgtaccggt agaaaccatc acatgtttca gcacatcagc ggaagaattg
     1021 ttgataaacg cttgccactc ttcgacagaa tagtgtttat gcacagcagt caaaatatca
     1081 aaagaagcca gcgcagaggc catagaaaat gtacctacgg tgtccatatt tgcggcgata
     1141 atcggcacgc cggaccagct ctgacctgaa tgtttgaagg tgaattgacg ttccagttca
     1201 acatcggaac ggcttttaag agtggagcgt ttagggcgga tgagaacgtc tttaaaacct
     1261 aacttcagat cttcttcaat acgcatgtgc ggattcctgg ggttaatggc tataagggta
     1321 agagcgcaac tccagtgacg ctatcatacg cactaatcaa tgcggcgcaa gactgcgaaa
     1381 ttgtcttttt ttacgctaca atcccataaa tttacttggt aaatagtgag cgaacgtttc
     1441 atcaatttcg ctttcgtgca ctcattttta acgttttgat aatcatgatg aattcccggg
     1501 aatataaatt atgaggtata tagttgcctt aacgggaggc attggcagtg gcaagagtac
     1561 cgttgccaat gcgtttgctg atctcggaat taacgtcatt gatgccgata ttattgcgcg
     1621 tcaggtggtt gaaccaggtg cacctgcgct acatgccatt gctgatcact ttggcgctaa
     1681 catgattgct gctgatggaa cattgcagcg ccgggccttg cgcgagcgga tcttcgccaa
     1741 cccggaagag aaaaactggc ttaacgacct gctgcatccg ctgattcagc aagagacgca
     1801 acaccagatc cagcaagcaa cttcccccta tgtactgtgg gttgtgccat tgctggtaga
     1861 aaactcactg tataaaaaag cgaatcgagt gctggtggtg gatgtcagcc cagaaacgca
     1921 acttaagcgc accatgcagc gcgatgatgt aactcgcaag catgtcgaac aaatccttgc
     1981 tgctcaggca acgcgcgaag ctcgccttgc cgtggcagat gacgtcattg ataataacgg
     2041 cgcaccggat gctatcgcat cggatgttgc ccgcctgcac gcacactatt tgcagcttgc
     2101 gtcgcagttt gtctcacagg aaaaaccgta atgcagaccc aggtcctttt tgaacatcca
     2161 ctaaatgaaa aaatgcgtac atggctgcgc attgagtttt tgattcagca actcaccgtt
     2221 aatttaccca tcgctgacca cgctggcgcg ctgcatttct tccgtaatgt cagtgaatta
     2281 ctggatgttt tcgagcgcgg cgaagtccgc actgagctgt tgaaagaact tgaccggcag
     2341 caacgtaaac tccagacctg gattggcgtg cctggcgtgg accagagccg tattgaagca
     2401 ttaattcagc agttaaaagc ggcggggagc gtattaattt ccgcgccgcg tatcgggcaa
     2461 tttctgcgtg aagatcgttt gattgctctg gtgcgtcagc gactgagcat cccaggcggc
     2521 tgttgcagct ttgatttacc tacattgcac atttggctgc atctacccca ggcgcagcgc
     2581 gacagtcagg tagaaacctg gattgccagc ctgaacccgc ttacccaggc actaaccatg
     2641 gtgctggatt taattcgcca gtcggcaccc ttccgcaaac aaaccagctt gaatggtttt
     2701 tatcaggata acggtggcga tgccgacttg ctgcgcctga atctgtcgct cgattcacag
     2761 ctttatccgc aaatttccgg acataagagc cgttttgcca ttcgttttat gccgctggac
     2821 agtgaaaacg gacaggtacc ggaacgtctg gatttcgaac tggcctgttg ctaaggagta
     2881 aaaatgtcag aaactattac ggtgaattgc ccaacctgcg ggaaaacggt ggtgtggggt
     2941 gaaatcagcc cgtttcggcc attttgctcc aaacgttgtc agctgatcga cctcggagaa
     3001 tgggctgctg aagaaaaacg aatccccagc aatggcgatc tttccgaaag cgatgactgg
     3061 agcgaagagc caaagcagtg acattttgtc tgatgcgacg ctggcctgat aagacgcggg
     3121 cagcgtcgca tcaggcatct tgtgcaaatg tcggatgcgg cgtgaacgcc ttatccgacc
     3181 tacagacgct taagcttcgc aattaccggt tcattggctg gcggaaaatc atcggcatta
     3241 agaccgacca gcgacatcca ctcaccgggt tgcccttctt taccccacgg caccccttcc
     3301 caactttcga ccagccagaa ccacagagtt atatgcctgt ctgggaattc atatgccagt
     3361 ttttcaaata gcgaaaaatg ttgtggggta atcccgacct cttcctgaag ttcacgcacc
     3421 accgcctgtt ccggcgtttc gcccatttca attttaccgc cgggaaactc cagtttattc
     3481 gccatgtgcg catctgctgc gcgacgcgtt ataaagattt cattgttctc gttgcgaata
     3541 atacctaccg caatttgcag ctttttcatt gttttaaacc tataaaaaag gcgcagaatc
     3601 ctgcgccttt tgcttcaaca gttagctttt attgcaggcg gccatgacac tgcttgtatt
     3661 ttttaccaga accgcacggg caaggatcgt tacgtcctac tttgcgctca ccggtttgcg
     3721 ccgccagtgc agctgcggct gcagagtcgt catcctgatg gctaagctgc tgcatttgcg
     3781 ctaaacgctc ggcttccata cgacgctgtt gttccagctc ctcaacctct tcaggcatac
     3841 gtacctggac tttgcttaac gtgctgataa cttcatattt taacgactcc agcatcgctg
     3901 caaacatgga gaacgattca cgtttgtatt cctgcttcgg atctttctgt gcatagccac
     3961 gcaggtggat accctgacgc aggtagtcca tcgccgccag gtgctctttc cacagagagt
     4021 cgagagtttg cagcatgacg cctttttcga agtgacgcat catctcagca ccaaccactt
     4081 cttctttacg ctgatacact tcgatggact gcgccagaat gcgctcacgc agcgtctctt
     4141 catgcagttc tggttcttta tccagccact cggcaattgg caaatcgagg tcgaaatcgt
     4201 tcttcagacg ttcctgcagc cccggaatat cccacatttc ttccagtgac tgtggcggaa
     4261 tgtaggcatc aatggtcgct ttgaacacat cttcacgaat gctgttgatg gtttcgctca
     4321 catcgctgac atccagcagt tcgttacgct gggagtaaat ggcgcgacgc tgatcgttag
     4381 ccacgtcatc atattccagc agttgcttac gaatgtcgaa gttacggctt tcaactttac
     4441 gctgggcgtt ggcaatcgct ttagtcaccc acgggtgttc aatggcttcg cctggcttca
     4501 tacccagttt acgcatcatg ccggatactc ggtcggaagc aaaaatacgc atcagcgcat
     4561 cttccatcga caggtagaaa cgggaagaac cagcatcccc ctgacgacca gaacgaccgc
     4621 gcaactggtt atcgatacga cgggattcgt gacgctcggt accgatgata tgcaggccac
     4681 ctgcttccag taccgcatcg tgacgtacct gccagtcggc tttaattttt tcaatttgct
     4741 ctgcggtcgg attttccagc gcggcaactt ctgcctgcca gctaccaccg agcacaatat
     4801 ctgtaccacg acccgccata ttggtcgcga tagtcaccgc agccggataa cctgcctgag
     4861 caacaatcgc cgcttcgttg gcgtggaatt tggcgttcag gacgttgtgc ttaataccgg
     4921 ctttggtcag ttcgtttgac accagctccg atttttcgat ggagatagta cccaccagca
     4981 ccggctggcc tttcgcagta cgttctttga tatcttcaat gatcgcctga attttttccg
     5041 cttcagtcat gtagaccagg tccggcagat ctttacgaat cattggacgg ttggtcggaa
     5101 caacgacggt atccagcttg tagatggagc taaattcgaa agcttcggta tcagcagtac
     5161 cggtcatccc cgccagtttt tcatacagac ggaagtagtt ctggaaggtg atcgaagcca
     5221 gcgtttggtt ttcgttctgg atctgcacac cttctttcgc ttccacagcc tggtgcagac
     5281 catcggacca gcgacggccc tgcatggtac gaccggtgtg ttcgtcaacg atgataactt
     5341 caccatcttt aacgatgtag tcgacgtcgc gggtaaacag cgcatgagcg cgcagcgccg
     5401 ccgttacgtg gtgcatcagc atgatgttgg ccggagagta cagagactcc ccttcatcca
     5461 tgatgccttc tttcaccagc agttcttcaa tcagcaccag accacgttcg gtcaggttca
     5521 cctggcgaga tttttcatcc accgagaagt ggccttcgcc ctggaaggtt tcggagtctt
     5581 ctttttcctg acggatcagg tgcggaataa ttttattcac gcgtttatac atttccgagc
     5641 tgtcttctgc cgggccggaa atgatcagcg gtgtacgcgc ttcatcgatc aggatggagt
     5701 ccacttcgtc caccagcgca tagtgcagtt tacgctgtac acgttcttca gggctgaacg
     5761 ccatgttgtc gcgcaggtag tcaaagccgt attcgttgtt cgtaccgtaa gtgatgtcag
     5821 ctgcataagc ttcacgcttt gccggtgctg gcatgcccgg caggttgata ccaacagtca
     5881 ggccaaggaa ttcaaacagc ggacggttgt tttcggcgtc acgttgcgcc aggtagtcgt
     5941 tgacggtaac tacgtgcacg cctttaccgg ttagtgcgtt caggtaagca ggcagcgttg
     6001 cggtcagggt tttaccttca ccggtacgca tttcggcgat gcagcgttcg ttaagaacca
     6061 taccgccgag taactgaacg tcgaagtgac gcataccaaa gacgcgctta cttgcctcac
     6121 gtaccacggc gaaagcttcc gggatcagat tttccagcac ttcgcctttt tccagacgtg
     6181 cacgaaactc tgcggtttta cctttcagtt cttcgtcgga gagtttttcc atctccggtt
     6241 ccatggcatt gatggtgttg accactttgc gcatccggcg cagggtgcga tcgttacgac
     6301 taccgaaaac tttagttaat aatttgatta gcataataaa atctcaaacg ccccgcgttg
     6361 cggagttaat aaaatgaagt aaaggtctat tgttgttagc tgaggcgttg agggccagca
     6421 cggatgcctt gcgcctggct tatccagacg ggcgtgctga attttgcttg tggggtaaag
     6481 tgcgcataat caatacgata acccttttca gacggcgtgc cttcctgggt caacagcgcg
     6541 ctgagcgtat ccagtaatgc aagatgttgc gcctgaagag gcaaagattc ttcagcaacg
     6601 ggcagcgttt gcggtgccat tgcgaaggaa agatgacgga ttaccgtgcg aatagcatgt
     6661 tgatgccagt aatcaacgga atagttcgaa ttcgggcggc gcgtgttcgc ttccagcaag
     6721 gccaattgac caaagttaac tttggctgaa ggctcgtggt tgcgggttgt cgcttttgcg
     6781 ggcgcgtttg gttcggcggc gttgctgagc gcaggcaaac ctaaactcgc cgcgaccatc
     6841 cctaataaga gatgcggcca gaagtagcgt ttaccaaact gtcgccagcg cgtcagtatt
     6901 ccactcacgt tattgccatc ccgatcgaat tcaaacgtat ttagcgcaca aatcttatca
     6961 ttaaagcctg aagtccacag cacgaatgaa gataagttgt gcgtaaaagt gcttaagaaa
     7021 acagcgttcg caccgttttt tatagctctt ataaaattca aaaaaaacga ctggttcacc
     7081 tggccggaga gagtgccaga tttgccagtc gaattttata cgacagtata aatgtcgtta
     7141 tgccagtaca gctgaaggcg ctttgaaggc caacggcagt tctgcgtcgt cctggaaggt
     7201 cacatattcc caggcttcct gtttcgccag gacagcctgc agcagtttgt tattcagtgc
     7261 atgaccggat ttataagcgg taaatgcacc aataatattg tgaccacaca tgaacaagtc
     7321 accgatcgca tcgagcattt tgtgacgcac aaattcgtct tcaaaacgca ggccgtcttc
     7381 gttcagtacg cgataatcgt caacaacgat ggcacaatcg aagctgccgc ccaggcacaa
     7441 accacgggac tgcagatatt cgatatcacg catgaaaccg aacgtacgcg cacggctgat
     7501 ctggcgcata aacgcatcag cggagaagtt catcgcataa cgctggttgc tggaatcaat
     7561 agccggatgg ttaaaatcga tggtgaaatc cagcgaaaaa ccattgtacg gcttaaattc
     7621 agcccactta tcgccatctt cgacacgaac agtctctttg atgcgaacaa attttttggc
     7681 gcagttcaac tcgtcgatac cggcgtcaag cagcaggtat acaaacggag cggcgctgcc
     7741 gtccatgatc gggatttccg gcgcgttaac ttcgataaca atgttatcga tgcccaggcc
     7801 cgcgagagca gcattgaggt gctctacggt tgaaatccgt acatcatgct cgttgaccag
     7861 acacgtacag agcatggtat cacgcacaga tttggcatcg gccgggaaat ctaccggtgg
     7921 attcaagtcg gtgcgacgat agatgacccc ggtgttggcc ggcgcagggc gtaacgtaag
     7981 ggtgactttc ttgccggtat gtaaaccgac acccgtcgcc tgaacgatac gtttaagtgt
     8041 cctttgtttg atcatcgtat tatctcgcca aattacctat ccaaccgaag tgtactatac
     8101 attcggcggg ccagtttagc acaaagagcc tcgaaaccca aattccagtc aattcttaat
     8161 cagcttgctt acgtaggaat gctgggatat ccagataatc cggctctttc gcagtttgag
     8221 gcgcattgtc attcacgact ttagcaaccg gcttctgctc ctgggtcagc ggagccatcc
     8281 catgctgctg gtagcgatcc atcactggct gctgaacctg cttattggtc accagagtga
     8341 tttcaggacg tttgtccatg ccgatacctg tcgcaacaac ggttacgcgc agctcgtcat
     8401 tcatatccgg gtcaagagaa gtaccgataa ccacagtcgc gttgtcggaa gcaaatgcac
     8461 ggatggtgtt acctaccgtt tcgaactcat ccagacgcag gtcgaagccc gccgtgatgt
     8521 taaccagcac gccgcgcgcg ccagacaggt cgatatcttc cagcagcgga gaagagatag
     8581 ccatttcagc agcttcttcc gcacggtctt caccgctcgc cacgccagaa cccatcattg
     8641 cgtagcccat ctcagacatt acggtgcgta cgtctgcaaa gtccacgttc atcaaacccg
     8701 gacgagtaat cagttcagcg ataccttgca cagcgccttt cagtacatcg ttcgctgcgc
     8761 caaacgcatc cagcagggag ataccgcggc ccagaacttt cagcagtttg tcgttcggga
     8821 tagtgatcag agagtccaca tgcttggaca gttcagtgat cccctgctcc gcgaatgcca
     8881 tacgcttctt gccttcaaag ttgaaaggct tagtgacgac agcaacggtc aggataccca
     8941 aatcttttgc cacttcagcg acgactggtg ctgcacctgt accggtacca ccacccatac
     9001 ccgcagcaat aaagaccatg tctgcacctt ccagcgccgc acgcaatgca tcgcgatcct
     9061 catcagccgc attgcggcca acttctggat tagcgccagc gcccagtcct ttggtgatac
     9121 cgctaccgat ttgaatcgtc tgtccaaccg ctgttttacg cagcgcttgt gcatcggtat
     9181 ttaccgcgaa gaattcaaca ccttcaatgc gctcgcgcac catgtgttca acagcattac
     9241 cgccgccgcc gccgacgccg atgactttaa tcaccgcgtc attggtaagt tccattggtt
     9301 caaacatagt ttctctccga tttgtgcctg tcgcctgagg ccgtaatcat cgtcggcctc
     9361 ataaaaatta aaactctttt cgcagccaac tattgagtcg cttgatccac gagccaactg
     9421 atgctgtaac acgtttttct acttcagctt caccgttaaa atgtgactct ttcccatagt
     9481 gaagcaatcc caccgccgtc gaataatacg gctcctgagc ataatccgtt aaaccggtaa
     9541 tgttcagcgg cgcgccgata cgcacttgcg tatgaaacac gcgctgagca caggctgcaa
     9601 gaccttcgat ctgcgctgcg ccaccggtta atacaatgcc tgccgccagg tgatgtttaa
     9661 ccccttgttg gcgaagcttt tcctgcaact gcaatatctc ttcgttgacc aagttgagca
     9721 gctcggtata gcgcggctcg atcacctctg ccagggtctg acgttgcaga ctccgtggcg
     9781 gacgaccgcc tacgctcggc acttccacgc tctcatcttt tccaacgatg gaacccagcg
     9841 cacaaccgtg gcgaacttta atcgcttcgg cgtcgcttgg cggcgtgcca aaggcgtaag
     9901 cgatatcact ggtcacgaca ttgccagcat aaggaattac cttagtgtgg cgcaatgccc
     9961 caccggtata aacggcgata tccattgtac caccaccgat atcgacgacg cagacaccca
    10021 gttcacgttc atcttccgtc aataccgaat aacttgatgc cagtccggca aatatcagtt
    10081 ggtcaacttt cagcccacaa cgttcaaccg ctttgacgat gtttttcgcc atatcgttgt
    10141 gacatgtgat caggtgcact tttgcctgca tccgcacgcc cgaaagtcct accggattct
    10201 tgatcccttc ctgatagtca atcgcatact cttgcgggat cacatgcagc acacgatgtt
    10261 catcgcgcac acgcaccgat ttcgcggtat ggacgacgtt ttccacatct tcttgcgtca
    10321 cttcttcttc agaaataggc accataccaa tttcattctg gcagctgatg tgcttaccag
    10381 aaagcgccag atataccgaa gagatctgac aatctgccat caattctgcc tggtcaatgg
    10441 cgcgttgtac gcacttgacc acggattcga ggtcgttcac cccgccttta tccataccac
    10501 gtgacgggca gctgcccacg ccaatgatat tgaccatacc gtcgggcaga acttccccta
    10561 ctaaagcggc aaccttcgcg gtaccaatct ccagtcctac taccagtttt ctgtccgtcg
    10621 ccttgatcat tgttgttctg cctgtgcctg attttgttgc tgagtagatt cctctggcgg
    10681 caagggcgcc cagcctactg ccgctccaga gtcataacgc aaatcaacgt agctaatccg
    10741 tttgccatcg gtttgcgcct gctgctgtaa aaccggataa agttctacaa agcgagccaa
    10801 acgtttcatc gtatcgcccc ggccaagatt gagcttaata tcgttattca gcgtcaactg
    10861 ccaggaacgc cgcgcggtca tcgccgcttc cttcagagta aatctgtcct ttgccagcat
    10921 ctgccccatt tcgcgatagc cctgcaacac ttcattagcg ctgccttccg ggccatacag
    10981 cattggaagc acctgcttgc tggtgcgatc tggcggcacg ctgaaggtgt ttccttccgc
    11041 gtctaccatg tgttgatcat tccaccgcgc aatcggcaca tattcaacca gatgaatctt
    11101 caattcatca ggccactgct ttctgacgct cacctgctta atccacggca ggcgttgttc
    11161 tatttgcgtc tggatgatgt tgacatcctg ggtcataaag gtacccggct cacccaatgc
    11221 caggatcgac tgccggatat catcattacg cgtgtaatgg cgttcaccgg tcaacaccag
    11281 ctttgagagc ggcaggcgtt gcgcatcttc catccagccc aacacgaccc agccgctcac
    11341 caacactgtc gttaaaacgg tcagcaggaa aaggatcccc gccagacgcg ttccattatt
    11401 gcggcgagaa gaaacctctt cttcgctgtt tcgcgtgttc agagcagcct gcgacatatt
    11461 agtccgccag ttccagaatt cgtactacca actgcgagaa gctcatacct gcctgacgtg
    11521 ccgccatcgg caccaggctg tggctggtca tacccggtga ggtattggct tccagcagat
    11581 aaaactgtcc atcgctgtcc agcataacgt caatacgtcc ccatcctttg caacctaacg
    11641 tcatccatgc tttcagcact aatgcctgca aattggcctc ttgtgaagct tccagaccag
    11701 cggggcagaa atactgtgtc tcatcagaga gatacttcgc ctcataatca tagaaggttc
    11761 cggccggttg aatacgtatt gacggtaaaa tttcttcacc gagtatcgca accgtgaact
    11821 ccggcccact tagccatttt tcaatcaata cttcttcatc gtgctgaaat gccaatctta
    11881 atgcatcttg tagagcattt tctgctacta cttttgtcat tcccacactg gaaccttcgc
    11941 ggctcggctt aacgataacc ggcaaaccca gagcagaaat ttctgctaac tgcttatcgc
    12001 tcaggccttt ttcaaactct gcgcgggtta acgctaccca cggcgcgacc ggtaaaccgg
    12061 caccttgcca cagaagtttg ctgcgtagtt tatctattga aagcgcagat gccatcactc
    12121 cgctgccggt ataaggcaag ctcatcagct cgagcatgcc ctgcagcgta ccatcttcac
    12181 cgccgcgacc gtgtagcgcg ataaacactt tctgaaaacc catcgacttc agttgcgtca
    12241 cgtcgacttc tttcgggtcg acaggatacg catcaatacc gccttcacgc agcccggcta
    12301 acaccgctgc gccagaattc agagaaactt cccgctcagc ggaagtcccg cccaacagga
    12361 ccgcgatttt atcagtcatg ttgttcttcc tccggagttt gcggcttcag tttgatttca
    12421 gctaaagaac gggcaatttt tccgatatta ccagccccct gaacgagaat caggtcgtta
    12481 ccggttaata ccggtgccag catctcggct acctgcgcag ggtccggcac cagaatggga
    12541 tcaattttcc cacgtccacg aattgtgcga cacagcgaac ggctgtccgc tcccggaatt
    12601 ggcgcttcgc cagccggata cacttccagc atcaacaggg tatcaacctg cgtcagcaca
    12661 ttggcgaaat catcatacag gtcgcgcgta cgggtaaaac ggtgcggctg aaacagcatt
    12721 accaggtttt tatccggcca gcctgcgcgc gccgctttaa tggtggcgtc aacttccgtc
    12781 gggtggtggc cgtagtcatc gaccagcatt gccgtaccgc ttttaccatt cactggctcc
    12841 agcgggaatt caccgaggaa atcaaaacgg cgaccagtcc cctggaagct ctccagcgca
    12901 cgcaaaatag cctcgtcgtc aattccctct tccgtagcaa ccgcaaccgc agctgcggcg
    12961 ttcagcgcgt tatgacggcc tggcgcattc agggtgacgc gcatcggctc tttgtcctgg
    13021 cgcagcagcg taaagtgccc ctgcgggcca atctgctgat aatcttctac acgcacgtcg
    13081 gcatcttcgc tgaagccgta agtcgtggtc tgacgtccca cacgcggtaa caattcgcgg
    13141 atcaccggat catcaacaca catcaccgca cgaccgtaaa acggcaggtt gtgcagaaaa
    13201 ttaataaaag tctgttttaa attctcaaag tcgccctggt aggtatccat gtggtcggct
    13261 tcgatattgg tgacaatcgc caccatcggt tgcagatgca ggaacgatgc atcactctca
    13321 tctgcttcgg caatcaggta ccgaccatgc cccaaacgcg catgaacccc cgccgctttt
    13381 accagtccac cgttaacgaa ggttgggtcg agtcccgctt ctgcgtagat gctggaaacc
    13441 atcgcagtgg ttgtcgtttt gccgtgcgtt ccggcaatgg cgatgccatg acgaaaacgc
    13501 attaactcag ccagcatttc ggcacgacgg atcaccggaa tacgcgcttc atgagctgcg
    13561 acaatttccg ggttatcggc agaaatcgcg ctggaaacaa cgaccacgct ggcatcacgt
    13621 acgttttccg ggcgatggtt gaaataaatc gtcgccccaa gattcattaa ctgctgcgtg
    13681 accggatttg gcgctaaatc ggaaccactg atctgataac cttcattggc cagaacttcg
    13741 gcaataccgc ccataccggc accaccaatg ccgacaaaat gtatgtgccg aacgcgacgc
    13801 atttcgggca cgatggaacg cagttttgcc aattgttgtg tattcattct ttacgccatt
    13861 aacttcttta attcatacga tgcaaaaggc atcgctacaa ttacgcccgg gcagcccggc
    13921 tcacttcatt tgccactcgc tcggtggcat ccggaatgga tgcggcgcgg gcgcgttctg
    13981 ccatggttaa taaggtttct cgcgaccacc cggccagggt gttggcgaca gcatccacgc
    14041 taagctgtgg ctgctcgata attttggctg cgcccgcttt ttccagcggt agcgcattcc
    14101 agtattgctg gcggtcttta tgttgaaacg gcacaaacaa cgccggtagt cctgccgcgg
    14161 cgatttcact caccgttaaa gcaccggagc ggcaaacgac gacatccgcc cacgcatacg
    14221 ccgccgccat atcatcaata aattccgtca ctttatgctg cggttgcccc gcttcggcat
    14281 acgcctgttc aacggattgt tgcgaacctt taccgctctg atgccagata gtgactgaat
    14341 cacccagttt cgcagcaacc tgcggcattg tctggttaag aatgcgtgcg ccctgggaac
    14401 cacccactac caacacacga accggacctt cacgtccagc caaacgttgc tgcggcaacg
    14461 gcagcgccag cacatcggta cgcaccgggt tacccaccac ttccgcatta gggaaagcgc
    14521 ctggaaacgc ctgcatcact ttggtggcaa tcttcgccag ccatttattg gttaatcccg
    14581 caataccgtt ttgttcatga agtacaaccg gaatacctaa cgaccacgcg gccagaccac
    14641 ctggacctga tacgtagccg cccattccga gcaccacgtc tggtttgtac gctttcataa
    14701 tcgcccgcgc ctgacgccag gcgttgaaga tacgcagcag cgcagctatc agtgctttta
    14761 taccttttcc gcgcagacca gagatacgaa tgaaatcaat ttcgatgcca tgttttggca
    14821 ctaagtccgc ttccatacgg tcggcagtcc ccagccagcg aacttgccaa ccctgagcca
    14881 ttaaatggtg cgcaaccgcc agtcccggga atacatgtcc accggttccg ccagccatca
    14941 ccattaatcg ctttccttga ccactcatcg tgaacctcgt acaaacgcct gcgctttctc
    15001 cagacgcgtt tcataatcaa tacgcaacag catcatgatg gctgtcgaca taatcagtaa
    15061 gctcgaacca ccgtaactga tcagcggcaa tgtcagacct ttggtcggta acatccccgc
    15121 cgccgcgcct acgttaacca gcgcctggaa gctaaaccag atgccaatag aacaggcgag
    15181 aaaaccggaa aaacggtggt caatttctaa tgctttacgg ccaatcgaca tcgcgcgaaa
    15241 agcgacgaag aataccatta aaagtgccag caccacaccg acatacccca gttcttcgcc
    15301 gataatggcg aaaataaagt cagtgtgcgc ttccggcaga tactccagtt tttgtaccga
    15361 gttacctaaa ccttgccccc aaagttcgcc gcgaccaaac gccatcagcg attgcgttaa
    15421 ctgatagccg ctgccaaagg gatcttccca cgggttccag aatgcggtaa cacggcggat
    15481 acggtacggt tcggcgagta tcagcaacac aaccgctgaa atgcccatac cgataatggc
    15541 aatgaactgc cacaatttcg ctcccgccag gaacaacatc gccagcgtag tcacaaacaa
    15601 caccaccacc gtaccaaggt ctggctgtgc cagcagtaac actgccaaca ccagaatcac
    15661 gcccatcggt ttcaggaagc cgcgcaggtt attacgtact tcgtcgcctt tacgcaccag
    15721 atagttggcg atatagcaaa acagtgacag ttttgtcagc tccgcaggct ggatacgcag
    15781 caaaccgaga tcgatccaac gcgatgcccc tttaaccgag ctccccacta ccagcacgat
    15841 catcagcagg atgatagatc cgagcagcat cgtggcactg tagcgttgcc agaactccat
    15901 cggcagacgc agcgtaatga tcgccagaat gaatgccagg atcagataga cgccatcacg
    15961 cttcgcgaag aagaacggat cgttggttaa gcgttgccct atgggcattg acgccgaggt
    16021 caccatgata aagccaatcg ccgcgaggcc gaaggtcagc cacagcaagg tgcgatcgta
    16081 catgatcagg ctgtcggtat ctttttccca cgagcccatc acccagccct ttagcgccgt
    16141 ggagatccag accaggatac tgaatcctgg caggcgcggc attttcaggc gagggagaga
    16201 taaacgcatc aacctaactc cttcgccaga cgggcaaact cattgcctcg ttgttcaaag
    16261 ttcttgaact gatcaaggct ggcacaggcc ggggagagca gaaccatatc gcccggctga
    16321 acacgcggag ccagcaagcg catcgcctgt tccatagttt cggtttgttc tgccacttcc
    16381 gggcgtagcg ccgccagctg cgcgccgtca cgaccgaaac aatacagacg tacgttatcg
    16441 ccattcaggt aacgcgccag tgggctaaag tccgccgatt taccatcgcc gcccagcaac
    16501 aaatgcagcg tgccgtctac gtgcaggcca ttcagcgccg cttccgtact gccgacgttg
    16561 gtcgcttttg aatcgttaat ccaacgtacg ccgttatgct ccagcacaac ttcaaagcga
    16621 tgcggcagac cggtgaaggt ggttaacgct ttcaggctgc tggcgcgcgg taaccctgcg
    16681 gcatctgcca gcgccagcgc cgccagcgca ttggtgtagt tatgctgccc ggaaagtttc
    16741 atctctttca cattcagcac tttctcgcct ttaacccgca gccaagtttc gccctgctga
    16801 tgattcaggt gatagtcacc catgttgacg ccaaagctga cgcagcgttc atccgcaccg
    16861 cgaatcggca ttgttaaggc atcatcagca ttaaccacgc aaactttcgc gttttcgtaa
    16921 atgcgcagtt ttgctgcacg atactgttgt aaaccaaacg gatagcgatc catatgatct
    16981 tcagtcacgt tcagaatggt cgctgctacc gcctgtaagc tggaggtggt ttccagctgg
    17041 aagctcgaca gttccagtac gtacagttcg cactcatcat ccagcagcat caacgcaggc
    17101 aggccaatat tgccacccac accaacgtta ccccccgccg ctttcgccat ttcacccact
    17161 agcgtggtga ccgtgctttt gccgttagaa ccggtaatcg ccacaatcgg tgcttgtgct
    17221 tcgcgacaga acagctcgat atcgccaacg atttcaattc cggcatcagc ggcagcgctt
    17281 aaggatggat gcgcaagtgc aataccggga ctggcgacaa tcagatctgc cgccatcagc
    17341 cattcatcat tcaaactgcc cgtgtggcgt tctacggctt cgggtaattt atccaggcca
    17401 ggcggtgtca tacgcgtatc cataacgcgc ggcgtcacac cgcgagcgag gaaaaagtcc
    17461 acgcaggaaa gcccggtgag gcccaggccg ataatgacaa catttttacc ctggtaatca
    17521 gccatgatta acgtaccttc agcgttgcca gaccaatcag gaccagcatc agcgaaataa
    17581 tccagaaacg cacaatgacg cgcggttccg gccagccttt cagttcatag tggtgatgaa
    17641 tcggtgccat gcggaaaata cgttgtccgc gcagtttaaa ggagccgacc tgcaggatga
    17701 cagaaagcgt ttctaccacg aacacgcccc ccataatcac cagcaggaat tcctgacgta
    17761 gcagtacggc gataatgcct aacgcaccac ctaacgccag cgaaccgaca tcgcccataa
    17821 agacctgcgc cggataggtg ttaaaccaca ggaagcccag tcctgccccg actatcgcgg
    17881 tacagacaat aaccagttcc ccggcgtgtc gcagatacgg tatgtgtaaa tagctggcaa
    17941 agttcatgtt gccggtcgcc cacgccacca gcgcaaaacc accggcgaca aatacggtcg
    18001 gcataattgc cagaccgtca agaccatcgg tcaggtttac cgcgttgcca gtacccacaa
    18061 tgacgaagta agccagcaga atgtagaaca gccccagctg cggcatcaca tctttaaaga
    18121 atgggaccac cagctgcgtt gcgggcgtgt ctttgccgac aaggtacaaa gcgaaagcaa
    18181 cacccagcgc aatgaccgac atccagaaat atttccaacg agcgatcaac cctttggtgt
    18241 ctttacgcac cactttgcga taatcatcaa caaagccaat aataccgtaa cctaccagca
    18301 ccaccaacac gcaccagacg tacggattcg acgggtaagc ccacagcagt acggagatca
    18361 caatcgccgt caggatcata atcccgccca tggtcggcgt accgcgcttg ctgaagtgtg
    18421 attcaggacc gtcgttacgc actacctgac caaaggaaag tttttgcaaa tgagcaatca
    18481 tgcgcgggcc catccacaat gagatgaaca gcgcggtcag caggctgacg atggcgcgaa
    18541 acgtcagata ggaaaagacg ttaaagccgg aataatattt gaccaaatgt tcggccagcc
    18601 aaactaacat gtcccattct cctgtaaagc gcgtactgcc tcttccatgg cagcactacg
    18661 tgaaccctta actaaaatcg taattacctg ttgctcagca atcagtgatt taagacgcgt
    18721 aattaacgca gttttatcag caaaatgttc gccaacgccg ctggcggtgc tgatagcatg
    18781 gctttgttta cccacgctta acacgcggtc aataccagca gcttttgccg cctcgcccac
    18841 ctgtacatgg caggcttcgc tttcagcgcc cagttccgcc atatcaccca ccaccagcac
    18901 gcggtagccc ggcatttcag ccagtacctg aacagcggcg gtcattgaac cgacattggc
    18961 gttgtaggag tcgtcgagca gcaactggtt ttctgccagt tggatgggga acagacggcc
    19021 tggaacagct ttcagatttg ccagccccgc tttgatagca tcaagcgttg cgcccacgga
    19081 catggagagc gcagcggctg ccagcgcatt cgcaatattg tgacgccccg gcaacggcag
    19141 cagaacatcc acgctaccgg ttggggtttg cagggtaaat tccgtaccgt gcgaggtcac
    19201 atggatattg gtggcggtga aatcgctgtt ggcggcattg ggtgagaaac gccacacttt
    19261 gcgtgagcca attacgctct gccagttcag ccagtcgttg ttgtcggcgt tcataatggc
    19321 gataccgttt tccggcaggc cgctaaagat ttcacctttc gctttcgcga cacccgcaag
    19381 cgagccaaaa ccttccagat gcgccgctgc caggttgttg accagcgccg cttccgggcg
    19441 agtcagactc acagtccagg caatttcgcc ctgatggttc gcgccaagtt caataactgc
    19501 gtaatcgtat tccggcgtta agcgcaacag cgtcatcggt acaccgatgt cgttgttgag
    19561 attgcctgcc gtataaagcg tgttgccgca ctggcttaaa atcgccgccg tcatctcttt
    19621 aacggaagtt ttgccggagg accccgtcag agcaaccacg cgcgccggaa cttgctggcg
    19681 aacccatgca gccagttcac caaacgccag acgcgtatcc ttgacgatta actgcggcag
    19741 gtcgatgtcc agcggacggc taaccagtag tgcgcctgcg ccgccagctt tcgcctggtc
    19801 ggcaaaatca tgagcatcga aacgttcgcc tttcagggca acaaacaggc agcccggcgt
    19861 cagttttcgg gtatcagtgg ttacagcatc aagggtgata tctgcacctt gcagttcacc
    19921 gttgagaatg tcggtaagtt ggctaagggt tacgctaatc atgcaatcac ccccagcaga
    19981 cgcgccaccg tgacgcgatc ggagtagtcc agacgctgat tgccaacaat ctggtaatct
    20041 tcatggcctt tgcccgcgac cagcaccaca tcgttctctt tagcctgcat aacggcgcaa
    20101 gtcaccgctt cagcacggcc ttccatcact ttggcatgtc cggcatctaa cattcccgcc
    20161 agaatatcgt tgatgatggc acgcggttct tcggtacgcg ggttatcgtc cgtcaccacc
    20221 gccacgtcag caaactcttc ggcaattgcg cccatcagtg gacgcttacc tttatcgcga
    20281 tcgccaccac agccaaagac acaccacagc ttgcccgcac agtgcagacg cgccgcctgt
    20341 aaggcttttt ccagtgcatc cggtgtatgc gcgtaatcca ccaccaccgt cggtttgcct
    20401 ggcgcagtga acacttccat acgtccgcaa accggttgca gacgcgcggc agtttttaac
    20461 aggtcagcca gcgggtagcc gagtgccagc agtgtcgcca gcgccagcag caagttactg
    20521 acgttaaaag cgcccatcag atggctgtca atttcgccat cgccccaact tgagctaaag
    20581 cgaatcgtcg caccgctgtc gtgatagttc acgtcgatcg cttttaacca gcgtccgtga
    20641 cagttcggat tgatatgatc ttccattgat accgcaaccg cgtccggcag ttttgccagc
    20701 cagcggcggc ccacttcatc gtcggcgtta ataatcgcct gaccgcaatg atgttcagaa
    20761 taaagcagcc atttcgcagc ttcgtagtgt tccatatcac catgataatc aaggtgatcg
    20821 cggcttaagt tggtaaagac cgacgccgca aatttcaatg ccgccacacg gtgctgtacc
    20881 agcccgtggg aggaaacttc cattgcgcaa aacgtcgcgc cctgatccac cagccccgcc
    20941 agctcatgct gaacatcgac tgcggaaccg gtagtatttt ctgtcgggat cactttccca
    21001 agcagaccgt taccaacggt gcccattacc gcgctggttt cgccaagcag ttggctccac
    21061 tgcgccagca gctgggtagt cgtggttttg ccgttggtgc ccgttacgcc tacgagacgt
    21121 aaattgtcag agggttcatg gtaaaagcgg cccgccagtg cagataaacg ctcattgagc
    21181 tggctgagat agatgaccgg tacgccgtgc atttcacgga tttcaccgtc ggtcgcctca
    21241 tctttcgcct ctgcaataat ggcagccaca ccttgcgcta tcgcctgcgg gatatatcga
    21301 cgcccgtccg cctgatgacc tactacagct acaaagagat cgcccgccgc agccacacgg
    21361 ctgtcgagtg tcatctctcg cagtgctcgc gaaggtgcgt ctggcaccca cggagcaaga
    21421 aggtcgcgca aattacgatc tgccacctgt cccctcgcct tgattaatca caaattcatt
    21481 tttatcgccc gttgtcagcg catccggctc gatgttcatg gtacgcaata cgccgcccat
    21541 gatggcacca aagaccggcg cggaaacggc gccgccgtag tatttacccg cctgcggatc
    21601 gttgataaca acaaccagcg cgaagcgcgg ctgactcgca ggcgcaacgc ctgcggtata
    21661 agcaatatat ttattgatgt agcgaccgtc cggcccgacc tttttcgcgg taccggtttt
    21721 aatggcgata cgatagcctt taatcgccgc cttcacgccg ccgccgcccg gtagcgccac
    21781 gctttccatc atatgcacca cggtgcggac aatggattcc gggaagacac gttcaccggg
    21841 aaccgggggg tcaactttgg taatcgacag tgggcgataa atgccgtagc tgccgatagt
    21901 tgcgtagact cgcgctaact gtaacggtgt taccattagc ccgtagccga aagagaaggt
    21961 ggccctctct atgtcagacc accgttgttt ttgaggatat aagccactgc gttctccgac
    22021 caaccccaaa ttggtcgctt ttcccagtcc aaaacgtgag taagtatcta ctaacgctga
    22081 ggacggcatc gctaacgcca gcttggaaac accgacgtta ctcgacttct gtaatacccc
    22141 ggtcagggtt aattcgctgt agcgtgccac gtctttgatt tcgtggccgt taattcgata
    22201 aggaatggta ttgagtaccg agttttcccg caccacgcca cgttgcaacg cggtcatcac
    22261 caccatcggt ttaaccgttg agcccggttc aaacacgtcg gtgatggtac ggttacgcat
    22321 cgcctctttc ggcgtgccgc tcagattgtt agggttgtat gacgggctgt tagccatcgc
    22381 cagcacttca cctgtgttga catccaccag cacggcgcta ccagattcag ccttgttaaa
    22441 ggccaccgcg ttgttcagtt cgcgataaac cagcgcctgc aggcgttcat caatactcag
    22501 cgccaggttg tgcgctgcct ggctgtcagt agaagaaata tcttcaatta cgcgaccata
    22561 gcggtcttta cgcacaatgc gctcacccgg ctgcccggta agccatttat cgaaactctt
    22621 ctcaacgccc tcaatccctt gactatcgac gttagtaaag ccgatgaggt gagcagtcac
    22681 ttcgccggac ggatagtaac ggcgagactc ttcacgcaga tgaatccccg gcagtttcag
    22741 ttttttgatg tagtccgcca tgtcagggtt tacctgacgc gccagataaa taaagcgccc
    22801 tttcgggttg gcgttaatgc gggctgaaag ctgatccagc ggaatattga gcgcgttagc
    22861 cagcgccttc cagcggtcac cgacgctgat accgccagcg tcatgcactt ctttcgggtc
    22921 agcccaaatc gcttttaccg gcacgctcac cgctaacggg cgaccagaac ggtcagtaat
    22981 catgccgcgg gaggtggaaa cttgctgaac gcgaagagaa cgcatgtcgc cctctttcac
    23041 cagcatatcc ggggagataa cttgtaacca cgctacgcgt ccgagcagaa aagccagcgc
    23101 caggagaata cagccgcata acaacgcaaa acgccaactg ataaagttgg catgttcttc
    23161 ctgacgtttt ggtttctgcg ttttcgccgc tgctttcatg cgtcgcgttt atccttattt
    23221 ttgcactacg atattttctt gtgacggatc aacatgctgc atttgcagtt tttccgtggc
    23281 gatcctttcc acccggctat ggtcgccgag cgcattctct tcaaggatca ggttgcgcca
    23341 ttcaatgtct aaagcatctc gctccagcac cagttgttcg cgctgagcgg tcagtaaacg
    23401 ggtatggtgc gccgtggtta ccacggtcac cgccgtcaaa ataatgcaaa tgaacaggca
    23461 gagtggcagc ttcccaaatc gcaaaagatc gtcaccgata acaccaggca atgcatggcg
    23521 ctcgtggctt cccatcgatc ctttaacttt gcttagagct tctgtcactc tgctgatcat
    23581 gcgttcgtcc tctctgcgat acgcagaact gaactacggg cacgaggatt ctcagccacc
    23641 tcttcttcgc ccggcattaa cttgcctaat gctcgcagct gacggccacc cagttttttg
    23701 agctgctctt cagtcatcgg taaccctacc ggaacttgcg gaccgcggct gttttcacgc
    23761 ataaaacgtt tcacaatacg gtcttccagc gagtggaagc tgatgatcga aagccgccca
    23821 cccggggcca gcacgttgag cgagcttttt agcgcctgct ctatctcctc cagttcactg
    23881 tttacccaaa tgcgcaccgc ctggaaggta cgggtcgcgg gatgtttaaa cttatctttc
    23941 accgacgttg cagcagccac gacttccgcc agttctttgg tgcgggtcat cggctgttcg
    24001 cggttacgct cgacaatggc gcgggcaatg cgtttggcaa aacgctcttc accataggtt
    24061 ttcaataccc aggcgatatc ggcttcttct gcggtttgta gccattcagc ggctgactgc
    24121 ccacgggttg ggtccatacg catgtccagc ggaccatcgc gcataaagga aaagccacgt
    24181 tcagcatcat caagttgcgg tgaagagacg ccaagatcga ggagaatgcc gtcgatcttg
    24241 ccgataagat cgcgctcggc aacgtattcg cccagcgcgg agaaaggtcc gtggatgatg
    24301 gagaagcgcg gatcatcaat agtcttcgca acggcgatag cctgcgggtc gcgatcgatc
    24361 gccagcaaac gcccctcttc gccaagctgc gagaggatca gacgtgagtg accaccgcga
    24421 ccaaaagtcc catcaatgta gatgccatca ggacggatat tgaggccatt aacggcttca
    24481 tccagcagca ccgtagtatg tttatagttt tccatcattt tatagagaca agtcctgcag
    24541 tcgctccgat aagtctccag tagccaactg ctctgcgtcg atatcttcct tgacctgttg
    24601 atgccaggtt gtttcatccc acagctcaaa cttgttgaac tgtccaacca gcatcacttc
    24661 ttttgtcagc ccggcatgtt gccgcagtac tggcgcgatt aacaatcgac ctgcgccatc
    24721 catctgacat tcgctggcat gacctaacag taggcgctgc acacggcgct caactgggtt
    24781 catgctcgac agacgcgata atttttgctc gataatttcc cattcaggca gggggtaaag
    24841 cagcaggcac gggtgatgaa tgtcaatggt gcaaaccatt tgaccggcag cgttctcaag
    24901 cagctgttcc cgataacggg taggcactga taaacgccct ttgctgtcga gattgactaa
    24961 cgttgctccc cggaacatgc cagcctcacc ccttattccc actttgcccc acaatttccc
    25021 actgaaagga gtttacggag cggaggaaaa gcttgtcaag ccagtcacaa ggcataccga
    25081 ggtaaaaaac ccgatgttta cggctaatat cagcgttgtt tattttacgt ccaacgtgcg
    25141 aagcaaatta acgttatgaa tagctgtaag aaaaaatccc tcatcgtcat cactgtttta
    25201 aaatgactca ctattttcca cagcaaatat aaagtgtcag tttgcgacgc gagcggcatt
    25261 ttaggacata tcttccccgg ttaacagtcc ttgttacgtc tgtgtggcgc ttgatgccag
    25321 cgggtttgcg caaaagcaaa gaaaagtgtt tgttaaatcg gcaattcatc gccgcatgta
    25381 acaaaataat gcaaaaacgc gctgtcgata tcacttaatt attgtgaatt tcagctggtg
    25441 agttaattaa cgggcgggtt taaaaccatt tatcaataat agtcaggaat agtcttattt
    25501 actttaagga tattgatgtc cagtcccgta ctctacgcgc cagagggaaa ttcacctggc
    25561 gcgtattttt gttcgcggct tagctacggc tgagcacgcc gcggcgatag agattacgtt
    25621 taatgcgcgt taaaccaggt tttggcttac gcggttcgtc caggcttgcc aggacaatct
    25681 ccagcacacg ctctgcgaca tcgcggtgac gttgagccac tgccagcacc ggacactgta
    25741 agaagtcgag cagttcgtta tcgccaaagg tggcaattgc caggtcagaa ggcagtttgc
    25801 cgtcgcgacg cagcgtgaca tccatcactc cttgcaacaa cgcaaacgac gttgtgaaca
    25861 gcgcctgcgg catcggatgc gtttccagcc atttttcgaa taactgggca gccgcctccc
    25921 gctcatagct gttggcatac aggaaatgca cttcgcgcgg atcatctttc caggcagtac
    25981 ggaaaccttg ttcacgcagg aagctgacag aaagctccgg tagcgcacca agataaagca
    26041 ccgtctcggc gggaaactta cgtaactctt ccgccagcat ttcggcatca tcctgatcgg
    26101 caccaaccac gctggtgaag tgttcacgat cgagggcgcg gtccagcgcg acaatcggga
    26161 acgggtcgtt agcccagcgt tgataaaaag gatgctcagg aggcaacgac gtagaaacaa
    26221 taatggcatc aacctgacgc tgtaaaaggt gctcaatgca ccgcatttcg ttgtctggct
    26281 gatcttctga gcaggcaatc agcagttgat aaccccgttg ccgcgcctgg cgttcaagat
    26341 agttagcgat gcgggtatag ctggtgttct ccagatcggg gatcacaaga ccaatagaac
    26401 gtgtgcgtcc agcacgaagc ccagctgcca cggcgttcgg gtggtaattg tgctcacgca
    26461 ccacagccat gactttttca acggttttgt cgctcacacg gtattgcttc gctttgccgt
    26521 taataacata gcttgcagtg gtccgcgaca ctcccgccag ccgagcgatt tcatccagtt
    26581 tcacaattgc cccttgcgta aaatgtaaaa accatagcca ttgtactggt atgggttaaa
    26641 ttcattaaca tctaagcgca gaaaattaac cgcggcaact gcttttattc caggttccca
    26701 ctgatttcgc aaaaaaagcc caacgtgaca tgttgggctg caaattgcgc attgagatca
    26761 ttctcaacgc attattttat cgccgcgcga aagtccgacc acaccagagc gagcaacttc
    26821 cacaattttt gccacatcac gaatcgatgc taaaaatgca tcaagcttat cgctggtgcc
    26881 tgctaattga acggtataaa gcgagggtgt gacatcgata atttgcccac ggaatatttc
    26941 cgtattacgt ttcacttcgt cacgcccgta accgctggcc tgaattttca ccagcatgat
    27001 ttcccgctca acatgcgcgc cctgccccaa ctcactcacg cgcaagacat cgaccagctt
    27061 gtgtaattgc ttttcgatct gctcaagtac tttttcatcg cccacggtct ggatggtcat
    27121 acgcgataat gtcggatcgt cggttggcgc aacggtcagg ctttcaatgt tgtagccacg
    27181 ctgggaaaaa aggccaatca cgcgggataa cgcgcctgat tcattttcga gtaagactga
    27241 taatatccgg cgcataatca ggttctctcc gttttgctta accacatttc atccattccg
    27301 cccccgcgaa tctgcatcgg gtagacgtgc tcgctgccat cgacggtaac atcaacaaac
    27361 accaagcgat tattgcgcac ctgttccagc gcctcgctaa gtttgctttc cagctcatgc
    27421 ggatgagaaa tctggatccc gacatgccca taggcttccg ccagacggac gaaatcgggt
    27481 agcgattgca tataagattg tgaatgacgg ccggaataga tcatgtcctg ccactgcttc
    27541 accatcccca gatagcggtt attgagattc accaccagta cgggcaactc gtattgcaac
    27601 gcggtagaca gttcctgaat gttcatctga atactgccgt cgccagtgac gcaaaccacg
    27661 gtttcttctg gcaacgccat tttgacgccc agtgccgcag gtaaaccaaa acccatcgtg
    27721 ccgaggccac cggaattgat ccagcgacgc ggtttgtcga atggataata aagtgcagca
    27781 aacatctggt gctgcccgac atcggacgtc acgtaagcgt ctcccttcgt caaccgccaa
    27841 agagtctcga tcaccgcctg cggtttaatc ttttcactgt gagtgtcata tttcaggcac
    27901 tgacgagcgc gccactgttc aatttgctgc caccagtcgc ggatctcatc cagtggttga
    27961 tgggcggatt cttgcgacaa gagttcaagc atttgttcga ggacctggcg agcatccccc
    28021 acaatcggga tatccgcagt cacggtttta gaaatggaag taggatcaat atcgatatgc
    28081 agaacagtgg catttgggca gtactttgcc agattgttcg tcgttcggtc atcaaatcgt
    28141 accccgacgg cgaaaatcac atccgcgtta tgcatcgtca tattggcttc gtaggtaccg
    28201 tgcattccca gcatgcccag tgcctgacga tgcgttgccg gaaacgcccc cagccccatc
    28261 aatgaggaaa caacgggcag attcaacgcc tccaccgttt ctttcaactg ctgatggcag
    28321 cccgccgtga ttgccccacc gcctacgtag acaaccggtt tttttgccgc taccagcgtt
    28381 tgcagagcac gcttaatttg ccctttatgt ccggtagtag tgggattgta agaacgcata
    28441 ctgaccgact caggccagac atagggtaat ttgttcgccg gattaagaat atctttcggt
    28501 aaatcaacga ccactggtcc tgggcgacca cttgccgcca gccagaaagc ctttttcagc
    28561 acctgcggaa tgtcttccgt ttgcttaacc agaaaactgt gtttaaccac tggtcgcgaa
    28621 atccccacca tgtcgcactc ctgaaaggca tcgtaaccta tcaacgaggt cgctacctgc
    28681 ccggaaagga caactaatgg aatggaatcc atataagcgg tggcgatgcc agtaatcgca
    28741 ttggtcgccc ctggacccga cgttaccagc acgacgccga cttccccggt cgcgcgcgcc
    28801 agaccatcgg ccatatgcac tgccgcctgc tcatgacgaa ctaaaacatg atcgatacca
    28861 cccacggtat gcaatgcatc gtaaatatca aggactgcgc ctccgggata accgaatact
    28921 tgtttaacgc cctgatcgat aagcgatcgg acgaccatct cggctccaga caacatctcc
    28981 atggcctgcc tcactgtttg atggaaaaaa tgtgtaaaac acattaaccg tccgatcttg
    29041 cttaagcaat tggcagccag agacataaac gcagggtaat aagaataaac aggaggaaag
    29101 gtgaaaagaa acgataaaat cctccattac gaaggattaa attgataata aatcggctga
    29161 atcccacaac ttacagcaat ttctctattt ttttaattaa tcctaaaata gagagcccac
    29221 acattcagaa taaaattcta cattcaataa aaaatgcaga ataaaccaga cattcatgtc
    29281 tgacctattc tgcattcagt tagcgtttgc aaattgagac taattgctct tccatccact
    29341 gatggccttt atcgcgcccg gcagcttcat gccaggagag ataacaggtt ctgctatttt
    29401 gttttaacgg cagcggtaat acctgtaatt ctaaggattc agcgaactct tcagccagcc
    29461 aacgcggcgc aatagcgacc aaatgcgttt gcgacgctca tcattgccat gccctgatac
    29521 gcgatactgg cttgcttatc taccgtgtca taccaaggtt gactaaatga cgcgaaacga
    29581 tcgagcgaaa ccgccgcatg ttgttcgtta taaacatcat gtttcagtaa cgggccctta
    29641 attgttggat gatttttgct ggctaccagc accatttcat ctttaaataa tggcacgctg
    29701 gtaaattcag gacgatggaa gtcttcataa ctaatcacaa actccgtttc ctgataacgc
    29761 agctgatgtt cagtgttctg atttaatgaa gacttgaaca taacatgtat atttggcgca
    29821 atctgctcaa tgtgattata aatctgcgag gtcagaatgc tgtctaacgg gctgcaaaca
    29881 caaagatgaa atacacgttc actgctcgcg ggttcaaaac ctgaaccagg caattcattt
    29941 tgt
//
LOCUS       DAJVTL010000045        29601 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.045, whole genome shotgun sequence.
ACCESSION   DAJVTL010000045 DAJVTL010000000
VERSION     DAJVTL010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29601
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.045"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            58..1407
                     /locus_tag="OQQ26_001896"
     CDS             58..1407
                     /locus_tag="OQQ26_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001137585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857363.1"
                     /translation="MPRLAPPVERWRDTMVQALAHGLPGSLGELCEVLGVPQDKAKDK
                     EGKALIQLFCKPRPKNSKLRRATSKTHPEEWRRFVAYAGLDIEAMREVYNRLPKWNYQ
                     GTELALWHRDQQINDRGVCMDMQLARAAIEAVDQEQKRLAKRTQEMTDGEVQAATQRD
                     ALIKHIVESYGVELPDMQRSTLERRIANPDLPSAVKELLAIRLQASTTSTSKYKALMK
                     GVSHDGRLRGTLQFCGASRTGRWAGRLFQPQNLPRPSLKQEQIDEGIEAPNAAAKTLK
                     CLQIASGAVYTDDAGSWSELHDTKLQALDSILTEAAGAPVLVAYHWKHDLERLLKAFP
                     RGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGYILVFFSHWWDLEQYQQI
                     IERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMEQRNSKRTVQNILLDAMKKRGIA"
     gene            1404..1604
                     /locus_tag="OQQ26_001897"
     CDS             1404..1604
                     /locus_tag="OQQ26_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1857364.1"
                     /translation="MSEKPDDLLTPDEVCQKLGITQKTLCEWNIKHRHRAILAPIRFS
                     AKVVRYERRNVDAFIQKCRSQY"
     gene            complement(1601..2998)
                     /locus_tag="OQQ26_001898"
     CDS             complement(1601..2998)
                     /locus_tag="OQQ26_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1857365.1"
                     /translation="MPRTVTHNPDSPNNDDVLAASEKWDACKPPYTSAHMKICVAAAK
                     IILAASGVARRSKYEKENYLRIDFSKAGKVTFYAEFPKKMGLKGKKLGEWPELAIQLA
                     REKALGMADGGLRAESVHAALEMYRDDLKAKVARQKLSPDSFTTYGVRIDRIKATFGE
                     REVFSDVTYNRLVEVLDEWIATRSNNNALELFAELRRFWKFCAPTLCNGRNVAASLPD
                     DYVSSRVQKPTPTRLFTDIESIARLWLNVAACTSVHQKNAVRFMIITGVRPINVHNLR
                     WDYVYEEAGEIVYPEGVIGMRGAMKTQKAFRLPITPEIRRIIDEQKAWRDSVPECNRD
                     YVFLQPRDPMQPFSKRSLDKLVKTYSPDGAVKGIKHDGTVKGKDGAFNTMCRKFLKSN
                     VIALMKERGYSRSDRREISLLCLHHSSKSDDPMAEHYDFSDEILQEEIALKREAFEAH
                     ERSILAQVALLRRRG"
     gene            3213..3473
                     /gene="yfhL"
                     /locus_tag="OQQ26_001899"
     CDS             3213..3473
                     /gene="yfhL"
                     /locus_tag="OQQ26_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster ferredoxin YfhL"
                     /protein_id="HCS1857366.1"
                     /translation="MSLLITKRCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
     gene            complement(3667..3747)
                     /gene="shoB"
                     /locus_tag="OQQ26_001900"
     CDS             complement(3667..3747)
                     /gene="shoB"
                     /locus_tag="OQQ26_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin ShoB"
                     /protein_id="HCS1857367.1"
                     /translation="MTDCRYLIKRVIKIIIAVLQLILLFL"
     gene            complement(4157..4537)
                     /locus_tag="OQQ26_001901"
     CDS             complement(4157..4537)
                     /locus_tag="OQQ26_001901"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HCS1857368.1"
                     /translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
                     GVVNMHVTLADERHYACATVIIES"
     gene            complement(4537..5268)
                     /gene="pdxJ"
                     /locus_tag="OQQ26_001902"
     CDS             complement(4537..5268)
                     /gene="pdxJ"
                     /locus_tag="OQQ26_001902"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HCS1857369.1"
                     /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
                     TEGGLDVAGQREKIRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
                     DAKTDAEQAQELVRIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
                     IGRAVMTGLKDAVAEMKRLMLEARG"
     gene            complement(5280..6008)
                     /gene="recO"
                     /locus_tag="OQQ26_001903"
     CDS             complement(5280..6008)
                     /gene="recO"
                     /locus_tag="OQQ26_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HCS1857370.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDD
                     TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTHYE"
     gene            complement(6020..6925)
                     /gene="era"
                     /locus_tag="OQQ26_001904"
     CDS             complement(6020..6925)
                     /gene="era"
                     /locus_tag="OQQ26_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HCS1857371.1"
                     /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
                     NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            complement(6922..7602)
                     /gene="rnc"
                     /locus_tag="OQQ26_001905"
     CDS             complement(6922..7602)
                     /gene="rnc"
                     /locus_tag="OQQ26_001905"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004248457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HCS1857372.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            complement(7875..8849)
                     /gene="lepB"
                     /locus_tag="OQQ26_001906"
     CDS             complement(7875..8849)
                     /gene="lepB"
                     /locus_tag="OQQ26_001906"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HCS1857373.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD
                     SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
                     VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
                     ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            complement(8865..10664)
                     /gene="lepA"
                     /locus_tag="OQQ26_001907"
     CDS             complement(8865..10664)
                     /gene="lepA"
                     /locus_tag="OQQ26_001907"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HCS1857374.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
                     CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
                     KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
                     VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            complement(10862..11341)
                     /gene="rseC"
                     /locus_tag="OQQ26_001908"
     CDS             complement(10862..11341)
                     /gene="rseC"
                     /locus_tag="OQQ26_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HCS1857375.1"
                     /translation="MIKEWATVLSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
                     DVAALCGAILGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
     gene            complement(11338..12294)
                     /gene="rseB"
                     /locus_tag="OQQ26_001909"
     CDS             complement(11338..12294)
                     /gene="rseB"
                     /locus_tag="OQQ26_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HCS1857376.1"
                     /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
                     LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTL
                     NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
                     KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
                     LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
     gene            complement(12294..12944)
                     /gene="rseA"
                     /locus_tag="OQQ26_001910"
     CDS             complement(12294..12944)
                     /gene="rseA"
                     /locus_tag="OQQ26_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HCS1857377.1"
                     /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
                     GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
                     GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            complement(12977..13552)
                     /gene="rpoE"
                     /locus_tag="OQQ26_001911"
     CDS             complement(12977..13552)
                     /gene="rpoE"
                     /locus_tag="OQQ26_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HCS1857378.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
                     DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAID
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            complement(13549..13704)
                     /gene="rseD"
                     /locus_tag="OQQ26_001912"
     CDS             complement(13549..13704)
                     /gene="rseD"
                     /locus_tag="OQQ26_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HCS1857379.1"
                     /translation="MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFG
                     LGRLYLG"
     gene            13960..14514
                     /locus_tag="OQQ26_001913"
     CDS             13960..14514
                     /locus_tag="OQQ26_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005026578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCS1857380.1"
                     /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG
                     STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV
                     LFDTHIQPNGEESYHLTREGGHSHRRILHAADATGKEVETTLVSKALNHPNIRVLERS
                     NAVDLIISDKIGLPGTRRVVGAWV"
     gene            14533..15582
                     /gene="nadB"
                     /locus_tag="OQQ26_001914"
     CDS             14533..15582
                     /gene="nadB"
                     /locus_tag="OQQ26_001914"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF006567.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HCS1857381.1"
                     /translation="METCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRV
                     ANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIV
                     ARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAH
                     YTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRR
                     MPDAHGVSTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRI
                     NMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTH
                     SGPSILSPGNHYINR"
     gene            complement(15567..16304)
                     /gene="trmN"
                     /locus_tag="OQQ26_001915"
     CDS             complement(15567..16304)
                     /gene="trmN"
                     /locus_tag="OQQ26_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HCS1857382.1"
                     /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG
                     VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHT
                     ADIQQWLTQQTVRFDLIISNPPYYQQGAECATPQREQARYTTTLDHPSLLTCAAECIT
                     EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGPDQNYSEAYTALTQAFYLFM"
     gene            16436..17770
                     /gene="srmB"
                     /locus_tag="OQQ26_001916"
     CDS             16436..17770
                     /gene="srmB"
                     /locus_tag="OQQ26_001916"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HCS1857383.1"
                     /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC
                     YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
                     RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTG
                     KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
     gene            complement(17979..18860)
                     /locus_tag="OQQ26_001917"
     CDS             complement(17979..18860)
                     /locus_tag="OQQ26_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1857384.1"
                     /translation="MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFS
                     VQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKESDPDGELRVVSGETLLS
                     YRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELG
                     EQSLVLVASPQIADVDFTEPGRHNCCSFIINEPQCVFRQIFESTLRQRRITVENTIEL
                     ISIESIKRCVAANIGVSYLPRFAVAKELECGELIELPFGEQSQTITAMCAHHAGKAVS
                     PAMHTFIQCVEESFVAG"
     gene            18963..19550
                     /gene="eamB"
                     /locus_tag="OQQ26_001918"
     CDS             18963..19550
                     /gene="eamB"
                     /locus_tag="OQQ26_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HCS1857385.1"
                     /translation="MTPTLLSAFWTYTLITAMTPGPNNILALSSATTHGFRQSTRVLA
                     GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
                     KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
                     ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
     gene            complement(19606..19989)
                     /gene="grcA"
                     /locus_tag="OQQ26_001919"
     CDS             complement(19606..19989)
                     /gene="grcA"
                     /locus_tag="OQQ26_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007728348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HCS1857386.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
                     AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            20294..20983
                     /gene="ung"
                     /locus_tag="OQQ26_001920"
     CDS             20294..20983
                     /gene="ung"
                     /locus_tag="OQQ26_001920"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HCS1857387.1"
                     /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIATPPSLLNMYKELENTIPG
                     FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI
                     DWMPVLPAESE"
     gene            complement(21031..22068)
                     /locus_tag="OQQ26_001921"
     CDS             complement(21031..22068)
                     /locus_tag="OQQ26_001921"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HCS1857388.1"
                     /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA
                     DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC
                     AHFGVKGVVVQDAALLESGAAIRTAEGGAEHIQPITGDNIVNVLDDFRQAGYTVVTTS
                     SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV
                     LLGEWWRQNKA"
     gene            22275..22694
                     /gene="trxC"
                     /locus_tag="OQQ26_001922"
     CDS             22275..22694
                     /gene="trxC"
                     /locus_tag="OQQ26_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HCS1857389.1"
                     /translation="MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
                     GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
     gene            22763..23461
                     /gene="tapT"
                     /locus_tag="OQQ26_001923"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
                     /pseudo
     CDS             22763..23461
                     /gene="tapT"
                     /locus_tag="OQQ26_001923"
                     /gene_synonym="tuaA"
                     /gene_synonym="yfiP"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311476.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
     gene            23493..26153
                     /gene="pat"
                     /locus_tag="OQQ26_001924"
     CDS             23493..26153
                     /gene="pat"
                     /locus_tag="OQQ26_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_306183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HCS1857390.1"
                     /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMIRNLLAGGFNGPV
                     LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
                     PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
                     NTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPGHV
                     AISNPLDLRDDASSEHYVKTLDILLHSQDFDALMVIHSPSAAAPATESAQALIEAVKH
                     HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAKAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYQRTANEVQQAANAIFDRVKMTWPQA
                     RVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGMEWRPEDQAVVALPPLNMN
                     LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
                     SEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
                     QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIEQTEEILGVTR
                     AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA
                     LARKLGFNVDIQLEEGIVGLTLNLAQREES"
     gene            26267..27622
                     /gene="pssA"
                     /locus_tag="OQQ26_001925"
     CDS             26267..27622
                     /gene="pssA"
                     /locus_tag="OQQ26_001925"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HCS1857391.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
                     ASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPELDVRVLIDWHRAQRGRIGAAAS
                     NTNADWYCRMAQENPGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
                     HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
                     RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
                     PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
                     PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            27668..27991
                     /locus_tag="OQQ26_001926"
     CDS             27668..27991
                     /locus_tag="OQQ26_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417081.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HCS1857392.1"
                     /translation="MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNE
                     YSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVW
                     QLTRH"
     gene            complement(27988..29286)
                     /gene="kgtP"
                     /locus_tag="OQQ26_001927"
     CDS             complement(27988..29286)
                     /gene="kgtP"
                     /locus_tag="OQQ26_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HCS1857393.1"
                     /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
                     SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
                     MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
                     YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
                     DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
                     HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS
                     SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV
                     ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL"
BASE COUNT         7221 a         7777 c         7388 g         7215 t
ORIGIN      
        1 gaaaccctgc tttattttca taactctcac ttcgaccgca ccgtcctgcg ttatgcaatg
       61 ccgcgcctgg caccgccagt cgaacgttgg cgcgacacaa tggtgcaggc gctggcgcac
      121 ggtctcccgg ggtctctggg ggaactctgc gaagtactag gcgtcccgca agacaaagcg
      181 aaggacaaag aaggtaaagc gctgatccag ctgttctgta agccacgccc gaaaaacagc
      241 aaactgcgcc gggccaccag caaaacccac ccggaagaat ggcggcgctt tgttgcttac
      301 gccggactgg atatcgaggc aatgcgcgaa gtctataacc gtctgccgaa gtggaattat
      361 caggggacag aactggcgct ctggcatcgt gatcagcaga tcaacgaccg gggcgtctgc
      421 atggacatgc aactcgcgcg cgctgcgatc gaagcggtag accaggagca aaagcgcctg
      481 gcaaagcgta cacaggaaat gactgatggc gaagtgcagg cagccacaca acgggacgcg
      541 ttgattaagc acatcgttga atcctacggt gtggagctac cagacatgca acgcagtacc
      601 ctagaacgtc gtatagccaa ccccgattta ccatctgccg tgaaagaact gctggctatc
      661 cgcctgcagg ccagtactac cagcaccagt aaatacaagg cactgatgaa aggcgtaagc
      721 cacgacgggc gcttacgcgg tacgctacag ttctgcgggg cgtcacgtac cggtcgttgg
      781 gccggacggc tattccagcc ccagaatctt ccccgccctt cactaaaaca ggaacaaata
      841 gacgaaggca tcgaagcacc gaacgccgcg gcaaagacac tgaagtgtct gcaaatcgcc
      901 agtggcgcag tatacacaga cgacgccgga agttggtcag aactgcatga caccaaacta
      961 caggcgctgg acagcatact gaccgaagca gctggcgcac ctgtgctggt tgcttatcac
     1021 tggaaacacg atcttgaacg cttgcttaaa gcatttcctc gcggtcgtca cctcgaccag
     1081 gatccacaga cactacgtga ctggaattcc ggaaagattc ctgttctctt tgcacaccca
     1141 gccagcgcgg gccacggtct gaacatgcag gacggcggat atatactggt atttttctca
     1201 cactggtggg acctggagca atatcagcaa attattgaac gtatcggccc aaccagacag
     1261 atacaggccg gacacaatcg tccggtattt attcaccaca ttattgctgc cgacactatg
     1321 gacgaaatgg tgatggagca gcgcaactca aaacgaacag tgcagaacat cctgctcgat
     1381 gccatgaaaa agagaggtat agcatgagcg agaaacccga cgatttactc accccggatg
     1441 aagtatgcca aaaattaggt attacacaga aaacactatg tgagtggaat attaagcatc
     1501 gtcatcgggc tatcctggca ccaattcgtt tcagtgcaaa agtggttcgt tatgagcgcc
     1561 gaaatgtcga cgcttttatt caaaaatgtc gcagccagta ttaacctcgc cgccgtagca
     1621 atgccacctg cgcaagtatg ctccgctcgt gagcctcgaa agcttcgcgc ttcaacgcaa
     1681 tctcttcctg taaaatctca tcagaaaagt cgtaatgttc tgccatcggg tcatctgact
     1741 tgctggagtg gtgaaggcaa aggaggctga tttcccttcg gtctgagcgg gaatagcctc
     1801 tttccttcat caaggcaata acattgctct taaggaattt acggcacatc gtattaaatg
     1861 caccgtcttt ccctttaaca gtcccatcat gttttattcc ttttacagcc ccgtccgggc
     1921 tgtatgtttt caccagctta tccagtgatc gttttgaaaa tggctgcatt ggatcacgtg
     1981 gctgcaaaaa tacataatcc ctgttgcact caggaactga atcacgccag gctttctgct
     2041 cgtcgataat ccgccggatc tcaggcgtta tcggcaggcg gaaagccttt tgtgttttca
     2101 tagcccctcg catgccgata accccttccg gataaacaat ttcaccagcc tcctcgtaaa
     2161 cgtagtccca gcgcaggtta tggacattaa tcggacgaac accagtgatg atcatgaagc
     2221 gaacagcatt cttctggtgt acagaggtgc aggcagcaac attgagccag agtcgggcga
     2281 ttgattcaat atcggtaaaa agccgtgtgg gggtaggttt ctgtacgcgg gaggaaacat
     2341 aatcatctgg cagactggcg gcaacattgc ggccgttgca aagagtaggt gcgcagaact
     2401 tccagaaccg acggagctcg gcaaacaact ccagggcgtt attgttcgag cgagtggcga
     2461 tccactcgtc cagcacttcc accagccgat tatatgttac gtcgctgaac acctcacgct
     2521 cgccgaacgt tgctttaatc cggtcgatac gcaccccgta ggttgtgaaa ctgtccgggc
     2581 tcagcttctg ccgggctact ttggctttga ggtcatcccg gtacatttcc agcgctgcat
     2641 gtacggactc tgcccgcagt ccaccgtcag ccatacctag tgctttttcg cgcgccagct
     2701 ggatagcgag ctccggccac tcgccgagct ttttaccttt gaggcccatc ttttttggaa
     2761 actcggcgta aaatgtaacc ttaccggctt tgctgaaatc gatacggaga tagttctctt
     2821 tttcgtattt ggaacggcga gccacgccgg aagcagcgag gatgattttg gcggcagcaa
     2881 cacagatttt catgtgtgcg ctggtatagg ggggtttaca ggcgtcccat ttttcagatg
     2941 cggctaaaac atcgtcatta ttggggctat ccggattatg tgttacagtg cgcggcattc
     3001 tcaatcctta tctgcgtagg cgcagaaaac aagctcacac atacaagtct tttctatggg
     3061 acaaaatgca atgtgttgcg gttttgtgtt gctggactga gtttatcaag gttaaataca
     3121 ctggatcaac atacagtaag ctaatgacag taaagcatac aaactcgata caacttactg
     3181 attttaaaat gatttaacgg caatccattg aaatgtcttt actaattact aaacgctgta
     3241 ttaattgtga tatgtgtgaa cccgaatgcc cgaatgaggc gatttcaatg ggagatcata
     3301 tctacgagat taacagcgat aagtgtaccg aatgcgtagg gcactacgag acaccaacct
     3361 gccagaaggt gtgcccgatc cccaatacta ttgtgaaaga tccggcgcat gtcgagacag
     3421 aagaacagtt gtgggataaa tttgtgctga tgcaccacgc ggataaaatt taatattcta
     3481 ctctggaagt agagtattaa ttattttact gggaagcctt aacgccatta tatttattta
     3541 attgatgaca ttagcataat cattcactaa gttaatttat atagtatctg cccagacact
     3601 tatttatagt tattaaaggc gcgtccgatt ggttcaccgg acgcacctta agtacgtttc
     3661 cttgtgttat aagaacagaa ggatcagctg taaaacagca atgatgattt tgatgactcg
     3721 tttaatcagg tatcggcaat cagtcattcg tttttcctta aacaaggaat gcagccattc
     3781 agattagccc ttacatctcc ccaaaactga acgtgcgagt tattgctgca ctccacacca
     3841 gagctttgac gacaccactc gtttcaatgg gggaattctg tggcatggtg taaagcacag
     3901 caaaatcttc aataacgaag ccaattttaa tgtacttacg aattggcggt cacgttaatc
     3961 tttccatcaa tattgctttc ttcgtaaagg ctcgagtttt tatgctaaag attgcaagtt
     4021 gcttgtaaaa gataagtaca ctgatccata atcgctgttg ttgagggtgc atgctgcaca
     4081 aaattaaagt taaaaagtaa aacccccgtt ccttaccagt tcgggggttt tactttttaa
     4141 agagaacggt attattttaa ctttcaataa ttaccgtggc acaagcatag tggcgttcat
     4201 ctgccagcgt tacatgcata tttacaacgc cgagcttttc cgccagtttt aatgcctcac
     4261 cccatagccg tagccgtggt ttgccgagct catcattgaa tacttcaaat tgattaaacg
     4321 ccagaccatt gcggatcccg gtgccaaacg cttttgctgc ggcttctttc acagcaaaac
     4381 gcttcgccag aaaacgcacc ggctggtggt gcgttttcca gattgcccat tcgttatcgc
     4441 tcaatacgcg gcgtgccagg cgctcaccgg atcgggcgat cactgcttct atgcgagcga
     4501 tctctacgat atccgtgcct aaacctaata ttgccattag ccacgcgctt ccagcatcag
     4561 acgcttcatt tctgccaccg catctttcag tccggtcatc actgcacggc caataatggc
     4621 atgaccgata ttcagttcat gcatctcagg gatggcggca atggctttca cgttgtgata
     4681 ggtcagaccg tgtccggcgt taactttcag accgagacta gcggcaaagg tcgcggcttt
     4741 ggcgatacgc accagctctt gcgcctgttc ggcgtcagtt ttggcatcag catagcaacc
     4801 ggtgtggatc tcgataaacg gtgcgccaac ctctgccgca gctttgatct gctcttcatc
     4861 ggcgtcgata aacagagaaa cctgaatccc ggcatctgcc agacgtttgc aggcatcgcg
     4921 tattttttca cgctgccctg caacgtccag gccgccttcg gttgttactt cctgacgctt
     4981 ttccggtacc aggcagcaaa aatgtggctt cgtctcaacg gcgatcgcca gcatctcttc
     5041 ggtcactgcc atctccagat tcattcgggt atccagcgtc tgccgcagga tgcgcacatc
     5101 gcggtcagta atgtggcggc gatcttcacg taaatgcacg gtaatgccgt ccgctcccgc
     5161 ctgctcggca ataaacgccg cctgcaccgg atccgggtaa gcagtaccgc gtgcgttacg
     5221 cagcgttgca atatggtcaa tgttgacgcc taacagtaat tcagccatga caatcctcat
     5281 cattcataat gtgttttcac cgttcgctta ggcataaact gccggaacag ttccctgctc
     5341 tttaatggtt taccgccaag atacggctta agcgccattc gggtaaagcg tttcgcggcg
     5401 cgtagtgtgt ctgcgtcagg aaattcccgc gcgtttaacg cttttaactg ccttccggtg
     5461 aacgttttat tgtcgataac gacgcttgcg ataaaccctt tttcttcgcg ataacgatac
     5521 gtcatggtgt catctaccgg ctcgccgcta cccgcacaat gggtaaaatt gacgccatag
     5581 cccagatgcc cgagcagtgc cagttcaaag cggcgcagcg cgggttctgg cgtaccagtg
     5641 gcaccggcca gagactgaat gcaatgtaag taatcgaaaa agagttcaga gaagcgcgtc
     5701 tcgtattcca gtacgcggga gagaagttcg ttgatgtaca gaccgctgta aagcgtgata
     5761 ccgcttaatg gcagcgccag cgagacagct tcagcactgc gcagcgtttt gacttcacca
     5821 cgcccgccga aacgtagcaa gagaggggtg aaaggctgta atgcaccttt cagagtagag
     5881 cgtttagagc gtgcgccttt ggcaaccaga cgcacgcgac ccgattcctc cgtgaagacg
     5941 tccagcatca ggctggtttc gctccacggg cgactatgca ggacaaatgc gcgctgccag
     6001 ccttccatcg gagtgactct taaagatcgt caacgtaacc gagactgcgc agtgcgcgtt
     6061 cgtcgtcggc ccaaccggat ttcactttta cccacagctc aaggtgaaca ggcgcttcga
     6121 acatttcctg catgtcttta cgcgcttcaa tcccgatggt tttgatcttg gcccctttgt
     6181 tgccaataac catcttcttc tgcccttcac gctcaacgag aatcaaaccg ttgatgtcat
     6241 aaccaccgcg ttcgttagag acaaaacgtt cgatctccac ggtcacggag tacggcagtt
     6301 cagcgccgag gaaacgcatc agtttttcgc ggatgatttc agacgccata aaacgctgtg
     6361 agcgatcggt gatgtaatct tccgggaagt gatgggtcgc ttcaggcaga tgcttacgca
     6421 cgattgctgc gatagtgtcg acattcagcc cggtttcagc agagatcggc acgatatcga
     6481 ggaagttcat ctggcttgcc aggaactgta agtgcggcag cagatcggct ttttcctgca
     6541 cgttatccac tttgttcacc gcgaggatca ccggcgcttt gccatcgcgc agtttgttga
     6601 gcaccatttc atcgtccggc gtccagcggg tgccttctac gacaaaaatg accagctcaa
     6661 cgtcgccaat ggagctgctc gccgctttgt tcatcaggcg gttaatggcg cgtttttctt
     6721 ccatatgcag gcccggggta tcgacgtaga tcgcctgata cgcgccttca gtatggatcc
     6781 ccacaatgcg gtgacgagtt gtttgcgcct tgcgggaggt gatggagatc ttctgcccca
     6841 gcagtttgtt caacaatgtg gatttgccaa cattcggacg tccgacgata gcaataaatc
     6901 cgcagtaact tttatcgatg ctcattccag ctccagtttt ttcaacgcct gttcggcggc
     6961 agcctgctca gccttacgac ggcttgaacc tgtgccaacc accggttcac tcaggccgct
     7021 gacctggcag tggatagtaa attcctgatc gtgcgcttcg ccacgtacct ggactaccag
     7081 ataagtcggc agcggcagat ggcgaccctg caaatattct tgcaagcgcg ttttcggatc
     7141 tttttgttta tcgcctgggc taatttcgtc cagacgggtt tgataccagt tgaggattaa
     7201 tttctcgacg gtttgaatat cactgtcgag gaatacgcca ccaattaatg cttcgacggt
     7261 gtcggcgaga attgactcac gacgaaatcc accgctttta agttcacctg gccctaaacg
     7321 taagcactcg cctaactcaa attcgcgcgc cagttccgcc agcgtattgc cacggaccag
     7381 cgtggcgcgc atccggctca tatcgccttc atccacacga gggaaacggt gataaagcgc
     7441 attggcgata acgtagctca gaatagagtc gcctaaaaat tctaaacgct cgttatgttt
     7501 gctgctggca ctacgatggg ttaatgcctg ctgcaacagt tcctgatgat taaaagtgta
     7561 gcccagcttc cgttgaagcc gattaattac gatggggttc atgcgatacc aataaataaa
     7621 tgcgtcaaca attcagcaca cgaaacagac ctgatataca tggctctgct aactgcttcg
     7681 ctgcagtttc agtttaccgg tatatgggga ccaacgctgt ttcgtgtgcc gtggcaacct
     7741 ggaggtgcca accttaaact tcgggggaat attctataca caacgacggg ggatgtcgtt
     7801 agccacggga gatttatctc ataaataatt cacgttgtcg ccataacggc gacaacgtga
     7861 acgaagatga gctattaatg gatgccgcca atgcgactta agcgcacacc agtcggccat
     7921 tcgccttctt gcttatcgaa gctcatccag atagccgttg cccgaccgac cagattcgct
     7981 tcaggcacaa aaccccagta acggctgtcc gcgctgttgt cgcggttgtc gcccatcatg
     8041 aagtattgtc ccggaggaac aatccaggtt gccagttgtt gccctggctg ctggtaatac
     8101 atccccacct gatcctgcgc aatcggcact gtcagaatgc ggtgcgtcac atcacccagt
     8161 gtctctttac gctcggaaag acgaattcca ttttctttgg tttcgttttt cggcacttca
     8221 aagaatccgc tggtcgcttc cccaccatta cggcgtgaga aggtctgaac gaaatcgctc
     8281 ggttccacgt tggagtaggt gaccggtagc gcgttttcac atgcctggcc ggaactgcat
     8341 cccggttgaa tcgtcagctc ttttgagacc ggatcataag tgactttatc gcccggtaaa
     8401 cccaccgcgc gcttgatgta atcaagcttt ggatcttccg gatatttaaa gaccacgata
     8461 tcgccgcgtt tcggatgacc ggtttcaatc agcgttttct ggtagatagg atctttaatg
     8521 ccataagcaa acttctctac cagaataaaa tcaccgatta acagagtcgg catcatcgaa
     8581 cctgacggga tctggaacgg ttcataaata aacgaacgca caatcaatac gatagccagt
     8641 accggaaaaa cagaagcacc ggtttccagc cagccaggct tcggcgcaac ctttttcaac
     8701 gttgctttat ccagtgagtc cccggcagcc gcctgcgccg ctgcctgacg ttcccgccgt
     8761 ttaggtgcga aaaagaattt atccacgcac cataaaatgc ccgtcaccag tgtggcaatc
     8821 accagaatca gggcaaacat attcgccatg ccaactccta agggttattt gttgtctttg
     8881 ccgacgtgca gaatggcgag gaacgcttcc tgcggcagct cgacgttacc aatctgcttc
     8941 atgcgtttct taccttcttt ctgcttctgc agcagttttt tcttacggct gatatcgccg
     9001 ccataacatt tagccagtac gtttttacgc agctgtttca cggtggatcg cgcaataatg
     9061 tgcgtaccaa tcgctgcctg aatggcgata tcaaactgct ggcgtgggat cagatctttc
     9121 atcttctcca ccaactcgcg accgcggttt tgcgaattat cacggtgggt gatcaacgcc
     9181 agcgcatcaa cacgttcacc gttgattaat acgtctacac gtaccatgtc agacgcctgg
     9241 aagcgtttga agttgtaatc cagagacgca taaccacgcg aggtagattt caggcgatcg
     9301 aagaagtcga gcaccacttc cgccatcggg atctcgtacg tcagcgccac ctgattaccg
     9361 tggtaaacca tattggtctg cacgccgcgt ttttctacgc acagcgtaat aacgttgccg
     9421 agatatgcct gcggcagcag catgtgacac tctgcaatcg gctcgcgcag ttcgtaaatg
     9481 ttatttaccg caggcagctt ggatgggctg tcgacgtaga taacttccct tgacgtggtt
     9541 tcaacttcat acactacggt cggcgcagtg gtgatcagat ccagatcgta ttcacgttcc
     9601 agacgttcct ggatgatctc catgtgcagc aggccaagga agccgcagcg gaaaccaaag
     9661 cccagcgcgc tggagctttc cggctcatag aacagtgagg catcgttcag gctgagttta
     9721 cccagcgcgt cacggaaggc ttcatagtcg tcggagctta ccgggaacag accggcgtat
     9781 acctgcggtt tgactttctt aaagccaggt agcgcctttt ctgccggatt acgcgccagc
     9841 gttaaggtat cgccgactgg agcgccgtgg atatctttaa tcgcacatac gagccagcct
     9901 acttcgccac atttcagttc agtgcggtca acctgtttcg gcgtgaagat gcccagacgg
     9961 tcggcgttat aggtctgccc ggtactcatg actttcactt tgtcgccctt acgcagggtg
    10021 ccgtttttaa tacggataag tgaaacaacg cccaggtagt tgtcgaacca tgagtcgata
    10081 attagtgcct gcaacgggcc ttccggatcg ccttccggcg gcggaatgtc gcgcaccaga
    10141 cgttcgagaa cgtcctgcac gccaacgccg gttttcgctg aacagcgcac cgcgtcagtg
    10201 gcgtcgatgc cgacgatatc ttcaatttct tccgccacgc gttcaggatc ggctgccggc
    10261 aggtcaatct tgttcagtac cggcaccact tcgagatcca tttccatggc ggtgtagcag
    10321 tttgccaggg tttgcgcttc cacgccctgc ccggcgtcga ccaccagcaa tgcaccttca
    10381 caggcagcca gcgaacggga aacttcatag gagaagtcta cgtggcccgg ggtgtcgata
    10441 aagttaagct gataggtttc gccgtcagac gctttgtagt ccagcgtcac gctttgcgct
    10501 ttgatggtaa tgccacgctc acgctcaaga tccatggaat cgagaacctg cgcctccatt
    10561 tcacggtcag acaggccacc gcagatctgg ataatacggt cagacagcgt cgatttaccg
    10621 tggtcaatgt gagctatgat cgaaaagtta cgtatattct tcataaagta tgattattgt
    10681 gccttaatgc ccggttaacc aggcttttag aagtcgctgt tctgagctta acgtctgtat
    10741 taatagaaac gccgcattct acactacaac attaaggcga ggaaatgttc ataccgtatg
    10801 gattgtggta tctggaaacg tcctcgcatt tgttatgcaa aatgcaacaa agccagtgaa
    10861 atcactggct cgcgtcttcc gaagatgttt caaatcgcac aaggccaggc ggcaatgcca
    10921 cgcttaagat gatcggttgc cattctgccc gggcagcaaa cttacgcgag tagccgcgcg
    10981 caatcaggaa cccgccaata ccaccgagga tcgcaccaca taatgctgcg acgtcagaag
    11041 caaagagtag ctgaaatagc gaagcgataa ggaataatcc caccagcggc gacatataaa
    11101 ccagtaatgc ggagctaagc aggctgcctt cggcgatccc caattccact ttttgccccg
    11161 gcactaacgg ttcatcacag ggtacgacaa tggtatgcgt ggtttgcggg ccaagtttat
    11221 tcaacacgcg gctaccgcaa ccggcgcgtg aagcgcaact gctgcatgaa gctttaacat
    11281 cacaactgac cagcgcctgc ccgttttgcc aggagaggac ggtagcccac tctttgatca
    11341 ttgcgctgcc ccgaacttaa tattctcggc aatgcgtttc gccgtttgcg gcggcagttc
    11401 accgacaatg gtgatttcgg cgttatcacg tacgcttgta ctgacggttc tgcgtccggt
    11461 gcgcaacatc tgatcggtgc tcgatggcgt agcgcggtta acgtttaccg agaagctaaa
    11521 taatccgtcg gaatagagac gtgattcgat aggcatgttg tccatcgtcg gtagcggacg
    11581 tcgactactg gaaacttcgc taaaaccctg tggcaaccag gttggcgtcc agctgaattt
    11641 agctttttca cctacaggaa cagaaagcaa cggcggcaaa tttgccttcg ccagcgtctg
    11701 catactgctg ctgatatcct gattgacatt aaaagcaatc acgcgaaatt gttccagcgt
    11761 ttcaccatcg cgatcaagga gatcaaccct catcggtaat ttcgattcgg tgtccatcca
    11821 cacgatgtag ctgtagcgtg taccatctcg ggcaaccacg cgaataactt cgcaaagacg
    11881 atcagcaata cgcgtgcgcc cgacggagat aaagtcgtag taaggagaaa ggcgtttgaa
    11941 atcggtatag atgagcgatg gcagagaatc aacaatgtaa tcgccattaa gcgtgaacgg
    12001 ttcaagtccc ggttcaaaat agctgatttc attgccgcgc tgtaccactt cccggcgcgg
    12061 gccatccatt tgcaacaatt gtgcaagagg acggttatcg aggcgtgcat gtcgataacg
    12121 cagagactca acaccctgtt tattgatgct gatgaatgac agctcgtaat tcagtgactg
    12181 actggccagg ttcatctgct gtaataacgc cccggacgcg ggagtggccg aggcgttagc
    12241 agagaataac aggctacctg tcactaatga catggcaaac caaagttgct tcattactgc
    12301 gattgcgttc ctaaagtttg aattcctggc acctgtacag cggcttgctg ggtttgcgcc
    12361 tgctcaaact gaagctgttc agagtggagt cggcgttgca gttcgtaatc ctgcaacatt
    12421 gcattaatgc gacgacgctg ctcctgtacc tgctgctgtt gaccattgtt tgcggtcgct
    12481 tcagaaggta ctcccaggct taccgggctg gctttaccca tcatcggcag tgtattaaat
    12541 accggcgttt cgggctgctg ggacgtttca gattgtccat tatagtgctg gacgccaacg
    12601 ataactgcaa gcgatacgca tgcggctacg cccatttggg taagctgtgc cgcccacgga
    12661 cgtactttct gccagaatgg cattttctgc cattgatgcg gcgcaggctg ggcttccggg
    12721 atcaatgtcg ccggttgacg tactggctct tcttcaatgg cggccatcac gcgtgaagag
    12781 atatcgaaat ggagcacctc gggagtatca ccccgcattg agtcacggat taagtgatag
    12841 ctttcccagg ttttctgcat ttctgggtta tgagccagtt cgttaagcag ctcactatcc
    12901 agcgtttcgc catccattaa agcggaaagt tgttctttct gcatgcctaa tacccttatc
    12961 cagtatcccg ctatcgtcaa cgcctgataa gcggttgaac tttgttatca atagcttccc
    13021 tcgctcggaa gatacgtgaa cgcaccgtac ctaccggaca atccatgata gcggctatct
    13081 cttcatagct caggccatcc agctcccgca aggttattgc catgcgcaaa tcttccggga
    13141 gggactcaat agttcggaaa actatctgtc tcagttcttc tgacaacatt aagttctcag
    13201 ggttcgaaat ttctttcaac gcgccgccac tttcgaagtt ttcagcatca atggcatcca
    13261 catcactgga aggtggacga cgcccctgag caaccaggta atttttcgct gtatttacag
    13321 caatccgata cagccatgta taaaaagcgc tatctccccg gaacgaatcc agcgcacgat
    13381 aggctttaat aaaagcttct tgtaccacat cgggaacatc acccgacggc acatagcggg
    13441 aaaccagact cgccacttta tgctgatagc gcactaccag taagttaaag gctttctgat
    13501 ctcccttctg gacccgttca accaggacct ggtccgttaa ctgctcgctc atccgaggta
    13561 aagtctcccc aaaccaaatt tccacgcgct atcgaaacgc cactccatta gctgcaattt
    13621 gagcaagcaa agggttagag tgtctcgttt ttgtaaagtt ccgtaacgca tctgtttttg
    13681 tttgtcatgc tgtagacgga tcattatcta tcattataag tctacagaat ctgaacatcg
    13741 cattatctgt gtagaaatgc ccatttaact gcctgaagag taacccaacg gcctttttat
    13801 ttcaccacct aatcctccac cagccagtaa cttctctttt tctcgccgcc ctgcgtcagc
    13861 gtgtttagcc actgtaacaa atattaaaat agcaggtgtt tattcgcaca acatgatgct
    13921 atgctgacca aaccgtgttt agtaaattaa acaaagaaaa tgaatactct ccctgaacat
    13981 tcatgtgacg tgttgattat cggtagcggc gcagccgggc tttcactggc gctacgcctg
    14041 gctgaccagc atcaggtcat cgttctaagt aaaggcccgg taacggaagg ttcaacattt
    14101 tatgcccagg gcggtattgc cgccgtgttt gatgaaactg acagcattga ctcgcatgtg
    14161 gaagacacat tgattgccgg ggctggtatt tgcgatcgcc atgcagttga atttgtcgcc
    14221 agcaatgcac gatcctgtgt gcaatggcta atcgaccagg gggtgttatt tgatacccac
    14281 attcagccga atggcgaaga aagttaccat ctgacccgtg aaggtggaca tagtcaccgt
    14341 cgtattcttc atgccgccga tgccaccggt aaagaagtag aaaccacgct ggtgagcaag
    14401 gcgctgaacc atccgaatat tcgcgtgctg gagcgcagca acgcggttga tctgattatt
    14461 tctgacaaaa ttggcctgcc gggcacgcga cgggttgttg gcgcgtgggt atagaaccga
    14521 aataaagaaa cggtggaaac ctgccacgca aaagcggtgg tgctggcaac cggcggtgcg
    14581 tcgaaggttt atcagtacac caccaatccg gatatttctt ctggcgatgg gattgctatg
    14641 gcgtggcgcg cgggctgccg ggttgccaat ctcgaattta atcagttcca ccctaccgcg
    14701 ctgtatcacc cacaggcacg caatttcctg ttaacggaag cactgcgcgg cgaaggcgct
    14761 tatctcaagc gcccggatgg cacgcggttt atgcccgatt ttgatgagcg cggcgaactg
    14821 gccccgcgcg atattgtcgc ccgcgccatt gaccatgaaa tgaaacgcct cggcgcggat
    14881 tgtatgttcc tcgatatcag ccataagccc gctgatttta ttcgccagca tttcccgatg
    14941 atttatgaaa aattgctcgg gctggggatt gatctcacac aagaaccggt accgattgtg
    15001 cctgctgcac actatacctg cggtggtgta atggttgatg atcatgggcg tacggacgtc
    15061 gagggcttgt atgccattgg cgaggtgagt tataccggct tacacggcgc taaccgcatg
    15121 gcctcgaatt cattgctgga gtgtctggtc tatggctggt cggcggcaga agatatcacc
    15181 agacgtatgc ctgatgccca cggcgtcagt acgttaccac cgtgggatga aagccgcgtt
    15241 gagaaccctg acgaacgggt agtaattcag cataactggc acgagctacg gctgtttatg
    15301 tgggattacg tcggcattgt gcgcacaaca aaacgtcttg agcgcgccct gcggcgtatc
    15361 aatatgttgc aacaggaaat agacgaatat tacgcccact tccgcgtgtc gaataatttg
    15421 ctggagctgc gtaatctggt acaggttgcc gagttgattg ttcgctgtgc gatgatgcgc
    15481 aaggagagtc gggggttgca tttcacgctg gattatccag aactgctcac ccattccggt
    15541 ccgtcgatcc tttctcccgg caatcattac ataaacagat aaaaagcctg ggtcagcgcc
    15601 gtatacgctt cggaatagtt ctggtctggc ccacgaatga ctaagcgatc gctaaagcat
    15661 tctcccgcct gcggggagaa tgccagcagc acccgatgcg gcagtcgcgc ttcgttttcc
    15721 gctacatccg ttcgcagacg taaatgccag cccatgctta atgccagttc agtaaaacca
    15781 ttaccaatct gctctggcag caccacgcag aaaaatccct cttcggtaat gcactccgcc
    15841 gcacaggtca gcagcgatgg gtgatcaagc gtagtggtat agcgagcctg ttcccgttga
    15901 ggtgtcgcgc actctgctcc ctgctgatag taaggtgggt tactgatgat taaatcgaag
    15961 cgtactgtct gctgtgtgag ccactgctga atatccgccg tatggacgtt aatccgctct
    16021 gcccacgggg actggttgat attttcctgc gcctgcgcgg cagcttcact ttccagttca
    16081 acggcatcaa tcatcacgct gtcatcggtt cgctgcgcca gcattaatgc cagcaacccg
    16141 ctacccgcgc cgatatcaag gcaacgtttt accccagcca ccggtgccca tgcgcccagt
    16201 aaaataccat ccgttcccac tttcatcgca cagcgatcgt gagcaacaaa aaactgttta
    16261 aaagtaaatc cattacgacg aagcacggat gtagactgtg acatgaaaat aaaaccttgc
    16321 aggaaaaacg gcgatagcac cgggtgagaa caatacccga gaagcgatat ccatacaaac
    16381 agatgaagat tgcagccgta acgtctataa tcagcgcccc acacagaggt agaacatgac
    16441 tgtaacgact ttttccgaac ttgaactcga cgaaagcctg ctggaagccc tccaggataa
    16501 aggtttcact cgcccgaccg ccattcaggc tgccgccatt ccgcctgcgc tcgatggccg
    16561 tgatgtactc ggttctgcgc cgacaggcac cggtaaaacg gcggcgtatc tgctgccagc
    16621 gttgcagcac ctgctcgatt tcccacgtaa gaaatccggt ccgccgcgta ttttgatcct
    16681 caccccaact cgcgagctgg cgatgcaggt ggccgatcat gcccgcgaac tggcgaaaca
    16741 tacgcatctg gatatcgcca ccatcaccgg cggcgtagcc tatatgaacc acgcggaagt
    16801 gttcagcgaa aaccaggaca tcgtggtcgc cacgaccggg cgtctgctgc aatacataaa
    16861 agaagagaac ttcgattgcc gcgcggttga aacgctgatc ctcgacgaag cagaccgtat
    16921 gctggatatg ggcttcgctc aggatatcga acatattgct ggcgaaacgc gctggcgtaa
    16981 acagaccctg ctcttttcgg caacgctgga aggcgatgcg attcaggact ttgccgagcg
    17041 tctgctggaa gatccggtgg aggtttctgc caatccgtcc acccgtgagc gcaaaaaaat
    17101 tcatcagtgg tattaccgcg ccgatgacct ggaacataaa accgcattgc tggtgcatct
    17161 gttaaaacag ccggaagcga cccgctcaat tgtgtttgtg cgtaagcgtg agcgtgtgca
    17221 tgagctggca aactggctgc gcgaagcggg catcaacaac tgctatctcg aaggtgagat
    17281 ggtacaaggc aagcgtaacg aagcaattaa acgcctgacc gaaggccgcg taaacgtact
    17341 ggttgccacc gatgttgccg cgcgcggtat cgacattcct gacgtcagcc acgtctttaa
    17401 cttcgatatg ccgcgcagtg gcgatactta tttgcatcgt atcggacgta ccgcgcgcgc
    17461 cggtcgtaaa ggcaccgcaa tttcgctggt ggaagcccat gaccatttgc tgctgggcaa
    17521 ggttggccgt tacattgaag agccgattaa agctcgcgtt attgatgagt tacgcccgaa
    17581 aacgcgtgcg ccaagcgaga agcagaccgg caagccatcg aagaaagtac tggcaaaacg
    17641 cgccgagaag aaaaaagcta aagagaaaga gaagccgcgg gtgaaaaaac gccatcgcga
    17701 caccaaaaat attggtaagc gccgtaaacc aagcggaacg ggcgtgccac cgcaaacgac
    17761 agaagagtaa tctcaatgcc gggtttaagc ctggtattaa aagtgctggc aaacgcaaaa
    17821 ctgcctgatg cgctacgctt atcaggccta cgtggctcat gcaatatatt aaatttgcac
    17881 gatcttgtag gccggataag gcgttcacgc cgcatccggc atgaataaag cgcactttgt
    17941 cgacaagtta aatgccgggt ttaatcccga cattattttt atccagccac aaaactctct
    18001 tcaacacact gaataaaagt gtgcatcgcc gggctaaccg cttttccagc atggtgtgcg
    18061 cacatggccg taatggtctg cgactgttcg ccaaaaggca attcaattaa ttctccgcac
    18121 tccaactctt ttgccaccgc aaaacgcggc aggtagctga ctccgatatt cgccgcgaca
    18181 caacgcttga tgctttcgat acttataagc tcaatggtgt tttccaccgt gatccgccgc
    18241 tggcgcagcg tgctctcaaa tatctgccgg aagacacatt gcggttcgtt gataataaag
    18301 ctacagcagt tatgtcttcc cggctcagta aaatcgacat ctgcaatttg cggtgaagcc
    18361 accagcacca gcgattgctc acccaactct cgtcggttca gagcatcatc attccctaca
    18421 cgataaaaga cgccgacatc ggcctcatca ttcagcagtg catcacggat cacgtagcag
    18481 ttcagcgact gcaacgataa gcgtactttg ggcgctcgtt gccgaaaacg ctgcaacacc
    18541 tgcggcattc ggtaagagag tagtgtttcg cctgaaacaa cgcgcagctc cccgtccgga
    18601 tctgactctt ttttggccgc ctcgcgtagc gtatccatta ctctggtgag ttcataaatg
    18661 tgcggcagca gcttttttcc ttcgcgagtg aggcacatcc gtcggccaat tttctcaaac
    18721 agctggaccg agaactcctg ctcaagctgc tgaatatgaa aagtaaccgt cgattgtgta
    18781 cagcacaatt tttgcgaagc tcgcaaaaag gaaccctctt ccaccacggt tttaagcgta
    18841 ataaaacggc gcagatccat aaccccaaac ctatcgaaaa tatcgaattt agaatgtaaa
    18901 aacattcatt tttttaaatg ttctgtgtcg ggtactgtct accaaaacag aggagataac
    18961 aagtgacacc gaccctttta agtgcttttt ggacttacac cctgattacc gccatgacgc
    19021 caggaccgaa caatattctc gcccttagct cagccacaac gcacggattt cgtcagagta
    19081 cccgcgtgct ggcagggatg agtctgggat ttttgattgt gatgttgctg tgtgcgggca
    19141 tttcgttttc actggctgtt atcgacccgg cagcagtgca tctgttgagt tgggcaggag
    19201 cggcatatat tgtctggctg gcgtggaaaa tcgctaccag cccaacaaag gaagacggac
    19261 ttcaggcaaa accaatcagc ttttgggcca gctttgcttt gcagtttgtg aacgtcaaaa
    19321 tcattttgta cggtgttacg gcactgtcga cgtttgttct gccgcaaaca caggcgctaa
    19381 gctgggtagt tggcgtcagc gttttgctgg cgatgattgg gacgtttggc aatgtgtgct
    19441 gggcgctggc ggggcatctg tttcagcgat tgtttcgcca gtatggtcgc cagttaaata
    19501 tcgtgcttgc cttgttgctg gtctattgcg cggtacgaat tttctattaa cgaaaaaaag
    19561 cggaagaagt cgccctcttc cgcttagtaa cttgctactt aagccttaca ggctttcagt
    19621 aaaggtacga gcaataacgt cgcgctgctg ttccggagtc agagagttaa agcgaactgc
    19681 ataacctgat acacggatgg tcagctgcgg atatttttcc ggatgcttaa ctgcatcttc
    19741 cagagtttca cgacgcagaa cgttaacgtt caggtgttga ccaccttcaa cgcgaacttc
    19801 tggtttcact tctactggaa cttcacggta ttcaatgtca cccagtttgc ttactgcaac
    19861 cacttcatct tctgcataac ctgcttttgc aacgatgcaa cgcgcttcgc ctttttcgct
    19921 gtccagcagc cagaaagagt tcagcagatc gtcgttagcg gctttagtaa tctggatacc
    19981 tgtaatcatg tgatgcctcc ccggcaaaat tatttgattt gttcagcctg tcgcggccaa
    20041 ttggtaaaac cattgttgct tgagtgtata tatactcctc aacaaccctt gattccttga
    20101 tttgaatcaa taaaaaccac acatcgattg tggtcgtaaa tggattttat tgttttacat
    20161 caacttatgc gggtgtgaaa ttttaccaat ttacattttt ttgcactcgt ttaagtctaa
    20221 aaaatgagca tgattttgtt ctgtagaaat aagcagttaa gctaggcgga ttgaagattc
    20281 gcaggagagc gagatggcta acgaattaac ctggcatgac gtgctggctg aagagaagca
    20341 gcaaccctat tttcttaata cccttcagac cgtcgccagc gagcggcagt ccggcgtcac
    20401 tatctatcca ccacaaaaag atgtctttaa cgcgttccgc tttaccgagt tgggtgacgt
    20461 taaagtggtg attctcggcc aggatcctta tcacggaccg ggacaggcgc atgggctggc
    20521 attttccgtt cgccccggaa tcgccactcc tccgtcactg ctgaatatgt ataaagagct
    20581 ggaaaatact attccgggct tcacccgccc taatcatggt tatcttgaaa gctgggcgcg
    20641 tcagggcgtt ctgctactca atactgtgtt gacggtacgc gcaggtcagg cgcattccca
    20701 cgccagcctc ggctgggaaa ccttcaccga taaagtgatc agcctgatta accagcatcg
    20761 cgaaggcgtg gtgtttttgt tgtggggatc gcatgcgcaa aagaaagggg cgattataga
    20821 taagcaacgc catcatgtac tgaaagcacc gcatccgtcg ccgctttcgg cgcatcgtgg
    20881 attctttggc tgcaaccatt ttgtgctggc aaatcagtgg ctggaacaac gtggcgagac
    20941 gccgattgac tggatgccag tattaccggc agagagtgag taaatttgcg ggaaaatgcc
    21001 ggatggcaga gttgccaccc ggctgattta tcaggcttta ttctgacgcc accattcgcc
    21061 aagaagaacg ccggttgcga cagagatatt cagcccggca acgttgccag taccatcaat
    21121 cttcacgcgc aaatcgttcg gatcgcgtgc ggcatccggt aacccttcat attcctgccc
    21181 cagcaccagt accattttcg ctggcagact ggttttgaac agcggtttcc cctgctcgct
    21241 ggaagttgtc actacggtgt aacccgcctg acggaaatca tccagcacgt taacaatgtt
    21301 gtcgccagta atcggctgaa tgtgctctgc gccgccttct gcggtacgga tagccgcacc
    21361 cgactccagc agtgccgcat cctgcaccac aacgcctttt acgccgaagt gcgcgcagct
    21421 gcgcatcatg ccacccaggt tatgcgggtt agattcgttt tccagtgcca gaacgcaatc
    21481 ctgcgcacct gcctggctta cccactgctg cacggttgtg ccattacgct ttttgatcag
    21541 gaagcaaacg ccgccgtgat gttccgtgcc tgacgctttt gtcaattccg cttcatccac
    21601 cacatggtac gctttgcggt ttgccgccat ccagcgcaag gcttctttaa aacgtggcgt
    21661 tacgctctgg ataaaccagg cgcgaacaat cgcttccgga cggctctgga acagtgcctg
    21721 acatgcattt tcgccgtaga cgcgggtttc ttccgcacgc tgacgacgca aaacttctgg
    21781 atcaataaaa cttttaccac tgatgccacc gtgatcggcc ttttccggcg tctcatcacc
    21841 cggcgcgcgg gaaaccgtgc gccacggcga atcttcccac ttgcggtcac ggggctgact
    21901 ctgtttgtca tcgcgggcgg ggcgacggcc accgtcagca cgagattttc ctggacgccc
    21961 gccccctttc ccggtacgcg ggttgtgggt acgtttatca gaatcatcat cactgcggac
    22021 atacatcact ttgaccttgc cgcttttacc tttcatttca tcgttcatgc ttttctccac
    22081 cagcgctgcg cgaagcgcgc agattacccg aagtccgcgc ggttcgccat gatttcgtac
    22141 caaagcctac gactatcata cctattgaat aaaacagatt gttgtctgga acaatgtccc
    22201 cgataatatg taacatatta gaaacatacc ggcgtcgttg ccgataagtc tccttactca
    22261 tcccgaggtt agttatgaat accgtttgta cccattgtca ggccatcaat cgcattcccg
    22321 acgatcggat cgaagatgcg gcaaaatgcg gacgctgcgg tcacgacttg tttgacggag
    22381 aggtgattaa tgcgaccggt gaaacgctcg acaaattgct gaaagatgat ctacctgtgg
    22441 tgatcgactt ctgggcaccg tggtgcggcc cctgccgtaa tttcgcacca atttttgaag
    22501 atgtcgcgca agagcgtagc ggtaaagtgc gctttgtgaa agtgaatacc gaagctgaac
    22561 gtgaattgag cagtcgcttt ggaattcgta gcattccgac gatcatgatt ttcaaaaacg
    22621 gtcaggttgt cgacatgctt aatggcgcag taccgaaagc gccgtttgac agctggctga
    22681 acgaatctct ttaatcttac cggggcgcat cttgtgcccc gttttctcct ctgcgacaat
    22741 ggcgtttttt cgacgctctc ttatgaccga aaacgctgtt ctccagttac gcgccgagcg
    22801 tattgcgcgg gcaacacgtc cttttcttgc ccgcggtaat cgcgttcgtc gctgccaacg
    22861 ctgcctttta ccagagaaat tatgtctctg ttcgactatt accccagcac aagcaaaaag
    22921 tcgcttctgt ttgctgatgt tcgacaccga gccaatgaag cccagtaata ccgggcgtct
    22981 gattgctgat attttgcctg ataccgttgc gtttcaatgg tcgcgtaccg aaccctcgca
    23041 agatttgctg gatctggtac aaaacccgga ctatcagcca atggtggtct ttcccgcctc
    23101 gtatgctgat gagcaacggg aagtgatctt cacaccacct gccggtaagc caccgctgtt
    23161 tatcatgctc gatggtacct agccggaagc tcgcaagata tttcgtaaaa gtccgtatct
    23221 ggataatctt cccgtcattt ccgtcgatct ttcccggctt tctgcctatc gcctgcgtga
    23281 agcccaggct gaaggccaat attgtactgc cgaggtagcc atcgcactgt tagatatggc
    23341 cggcgatacc ggggcggcag cagggttagg cgagcatttt acccgcttta aaacacgcta
    23401 tctggcagga aaaacgcaac atctgggtag catcacagca gaacagttag aaagcgttta
    23461 aaatcattcg gtcacttctg cgggagaccg gtatgagtca gcgaggactg gaagcactac
    23521 tgcgaccaaa atcgatagcg gtaattggcg cgtcgatgaa acccaatcgc gcaggttacc
    23581 tgatgatacg taacctgctg gcgggaggct ttaacggacc ggtactcccg gtgacgccag
    23641 cctggaaagc ggtgttgggt gtgttggcct ggccggatat tgccagcttg ccctttacac
    23701 ccgaccttgc ggttttatgt accaatgcca gccgtaatct cgctcttctg gaagagctcg
    23761 gcgagaaagg ctgtaaaacc tgcattattc tttccgcccc ggcatcgcaa cacgaagatc
    23821 tccgcgcctg cgccctgcgc cataacatgc gcctgcttgg accaaacagt ctgggtttac
    23881 tggctccctg gcaaggtctg aatgccagct tttcgcctgt gccgattaaa cgcggcaagc
    23941 tggcgtttat ttcacaatcg gctgccgtct ccaacaccat cctcgactgg gcgcaacagc
    24001 gtgagatggg cttttcctac tttattgcgc tcggcgacag cctggatatc gacgttgatg
    24061 aattgcttga ctatctggca cgcgacagta aaaccagcgc catcctgctc tatctcgaac
    24121 agttaagcga cgcgcgacgc tttgtttcgg cggcccgtag tgcctcgcgt aataaaccga
    24181 ttctggtgat taaaagcgga cgtagcccgg cggcacagcg actgctcaac acgacggcag
    24241 gaatggaccc ggcatgggat gcggctattc agcgtgccgg tttgttgcgg gtacaggaca
    24301 cccacgaact gttttcggcg gtagaaaccc ttagccatat gcgcccgctg cgtggcgacc
    24361 ggttgatgat tatcagcaac ggtgctgcgc ctgccgcgct ggcgctggat gccttatggt
    24421 cacgcaatgg caagctggca acgctaagcg aagaaacctg ccagaaactg cgcgatgcac
    24481 tgcctggaca tgtggcaatc tctaacccgc tcgatctgcg cgatgacgcc agcagcgagc
    24541 attatgtcaa aacgctggac attctgctcc atagccagga ttttgatgcg ctgatggtta
    24601 ttcattcgcc cagcgccgct gctcccgcaa cagaaagtgc gcaagcatta attgaagcag
    24661 taaagcatca tccccgcagc aagtatgttt ctctgctgac gaactggtgc ggcgagcact
    24721 cctcgcaaga ggcacgacgt ttattcagcg aagccgggct gccgacctac cgtaccccgg
    24781 aaggaaccat cactgctttt atgcatatgg tggagtaccg gcgtaatcag aagcaactac
    24841 gcgaaacgcc ggcgttgccc agcaatctga cttccaatac cgcaaaagcg catcttctgt
    24901 tgcaacaggc gattgccgaa ggggctacgt cgctcgatac ccatgaagtt cagcccatcc
    24961 tgcaagcgta tggcatgaac acgctcccta cctggattgc cagtgatagc accgaagcag
    25021 tacatattgc cgaacagatt ggttatccgg tggcgctgaa attgcgttcg ccggatattc
    25081 cacataaatc ggaagttcag ggcgtcatgc tgtaccagcg tacagccaat gaagtccagc
    25141 aagcggcaaa cgctattttc gatcgcgtaa aaatgacctg gccgcaggcg cgggtccacg
    25201 gcctgttggt gcaaagtatg gctaaccgtg ctggcgctca ggagttgcgg gttgtggttg
    25261 agcacgatcc ggtttttggg ccgttgatca tgctgggtga aggcggtatg gagtggcgtc
    25321 ctgaagatca agccgtcgtc gcactgccgc cgctgaacat gaacctggcc cgctatctgg
    25381 ttattcaagg gatcaaaagt aaaaagattc gtgcgcgcag tgcgctacgc ccattggatg
    25441 ttgcaggctt gagccagctt ctggtgcagg tttccaactt gattgtcgat tgcccggaaa
    25501 ttcagcgtct ggatattcat cctttgctgg cttctggcag tgaatttacc gcgctggatg
    25561 tcacgctgga tatcgcgccg tttgaaggcg ataacgagag tcggctggca gtgcgccctt
    25621 atccgcatca gctggaagaa tgggtagaat tgaaaaacgg tgaacgctgc ttgttccgcc
    25681 cgattttgcc agaagatgag ccacaacttc agcaattcat ttcgcgagtc accaaagaag
    25741 atctttatta ccgctacttt agcgagatca acgaatttac tcatgaagat ttagccaaca
    25801 tgacgcagat cgactacgat cgggaaatgg cgtttgtagc agtacgacgt attgaacaaa
    25861 cggaagagat cctcggcgtc acgcgtgcga tctccgaccc tgataacatc gatgccgaat
    25921 ttgccgtgct ggttcgctcg gatctcaaag ggttaggctt aggtcgacgc ttaatggaaa
    25981 agttgattac ctatacgcga gatcacggac tacaacgtct gaatggtatt acgatgccaa
    26041 acaatcgtgg catggtggcg ctggcccgca agctcgggtt taacgttgat atccagctcg
    26101 aagaggggat cgttgggctt acgctaaatc ttgcccagcg cgaggaatca tgagtaaggt
    26161 actggaaatg ttgaccactt aatcgggact ggtgttatta ttgcccgctt atgtcgtctg
    26221 cattgcacag aggacccttc aatgaacaga gaagaaatgc actgtgatgt tgtcaaaatt
    26281 taagcgtaat aaacatcaac aacaccttgc ccaactaccc aagatttctc aatcagttga
    26341 tgatgtcgat ttcttttacg ctcccgccga cttccgggag acgctgctgg aaaaaatagc
    26401 cagcgcgaag cagcgcattt gcattgtcgc cctgtatctc gaacaggatg acggtggcaa
    26461 aggcattctg aacgcgttgt atgaagctaa aaggcagcgt ccggaactgg atgtgcgggt
    26521 gctgatcgac tggcatcgtg cacaacgtgg acgcattggc gctgcggcat ctaacactaa
    26581 cgctgactgg tactgccgca tggcgcagga aaatccgggc gtagatgttc cggtttatgg
    26641 cgttccaatc aatacccgtg aagcccttgg tgttctgcac tttaaaggct ttatcatcga
    26701 cgatagcgta ctttatagtg gtgccagcct gaacgatgtt tacctgcatc agcacgataa
    26761 atatcgctac gaccgttatc atctgatccg taaccgtaag atgtcagaca ttatgtttga
    26821 atgggttaca cagaatatta tgaatggccg cggcgttaat cgtctggatg atgttaatcg
    26881 gccaaaaagc ccggaaatca agaacgatat tcgtctgttc cgccaggagc tgcgtgatgc
    26941 cgcttatcat ttccagggcg atgccgacaa cgatcagctt tccgtaacgc cgctagtggg
    27001 gctggggaaa tcgagtctgt tgaacaagac cattttccat cttatgcctt gtgccgagca
    27061 gaaactaacc atctgtacgc catacttcaa cctgccagca atccttgtgc gcaatattat
    27121 ccagttgctg cgcgaaggga aaaaggtcga aattattgtt ggtgataaaa ccgcgaacga
    27181 cttctacatt ccggaagatg aacctttcaa gataattggc gcattgcctt atctctatga
    27241 gatcaatctg cgtcgtttcc tgagccgttt gcagtattac gtcaatactg accagctagt
    27301 ggttcggtta tggaaagatg acgacaacac ctatcaccta aaagggatgt gggttgatga
    27361 taagtggatg ttgatcaccg gtaataacct gaacccgcgc gcctggcgtc tggatctgga
    27421 aaacgccatt ttgatccacg atccacaact ggagcttgcg ccgcagcgag agaaagaact
    27481 ggagctgatc cgcgagcata ccaccatcgt taagcactat cgcgatctgc aaagtattgc
    27541 cgattatccg gtgaaggttc gtaaactcat ccgccgtttg cgccgtatcc gcatcgaccg
    27601 attaattagc cgcatcctgt aatcacaacc ccgtcctgta cggggtttgt tttttggagg
    27661 ccacgttttg cgtattcttt ttgtctgttc gctattgtta ctttctggat gtagccatat
    27721 ggctaacgat agctggagcg ggcaggataa agctcaacac tttatcgcct cggcgatgct
    27781 ttccgccgcc ggaaatgaat attcacagca tcaggggatg agccgggatc gcagtgccat
    27841 gtttggattg atgttctctg tcagtttggg ggcgtcaaaa gagctttggg atagccgccc
    27901 cgaagggagc ggctggagct ggaaggattt ggcctgggat gtcgccggtg caagcaccgg
    27961 ctataccgtc tggcaactga cccgtcacta aagacgcatc cccttccctt tgcgatgtag
    28021 catcaaagaa accagaaacg ccaccacggc catcaaggtc acataccaga agaaggctgt
    28081 ttccattcct attgatttca gcgacaacgc tacgtactcc gccgaaccac caaatatagc
    28141 attagcgacc gcatatgaca gaccaacgcc taatgcgcga acctgtgccg ggaacatctc
    28201 agccttcagt attccactga ttgatgtata aaaactcact atcagcaggg cacacatcac
    28261 cagaccaaaa gcggcataag gcgaggaaac gttttgcaat gctgagagaa taggaacggt
    28321 aaaaatggct gccagcgaac cgaaacataa cattgaggta cggcgaccaa tcttatccga
    28381 cagcgcgcca atgagtggtt gaataagcat gaatacaaac agtgcggcag tcataatgcc
    28441 actcgccacg ttggcatgca ttcccgcagt atttaccaga tacttctgca tataagtggt
    28501 gaaggtatag aaacaaaggg agcccgcagc ggtaaaaccg agaaccatga tgaatgcacg
    28561 gcgattgcgc cataatcctt tcagagatcc agcttctttt aaagcgcgcg tttcttgttg
    28621 cgaagtttca tctaactgac gacgtaacca caacgccaca acagctaaca cagctcctaa
    28681 cgcgaaagga atacgccatc cccactctct gagtgcagcg tcttccatgg tgtgttgtaa
    28741 aaccacgaca accagtaggg ctagcagttg tccgccgatc aacgtcacat actgaaatga
    28801 tgcgtaaaaa cctttgcgcc cttcaacggc aacttcactc atataggtgg cgctggtgcc
    28861 atattctccg ccaacagata atccctgaaa taaacgagcg agaagcaata atgccggagc
    28921 ccacgtacct atagtttcat aacctgggag gcaggcgata accagcgatc cgaaacacat
    28981 catacacacc gataacagca tcgatttttt gcgaccatgt ttatcggcta tgcggccaaa
    29041 tagccaaccg cctattgggc gcatcaggaa tcccgcagca aaaacacctg ctgtttgtag
    29101 tagttgagtc gtcgtgttcc cggaagggaa gaagatgtgg gcaaagtaga gtgaacagaa
    29161 cgagtagaca tagaaatcga accactcgac cagattacct gaagaggccc ccacaatcgc
    29221 ccaaatgcgg cgacgagtat cactacttgt cagtttgctg tctgccgtta cagtactttc
    29281 agccatgcca ttatgtctcc tgccgtaatc cgatgctttt gtcggtcgct tttgtttatt
    29341 tcttttggta aagaaaatgt tatacatttg ttgcgtatca ttatgcaacc ttaaccatga
    29401 atttagttag caggaaaatg gttattgagg agcttaagga taaatttctg gtaaggagga
    29461 cacgtatgga agtgggcaag ttggggaagc cgtatccgtt gctgaatctg gcatatgtgg
    29521 gagtataaga cgcgcagcgt cgcatcaggc atttttttct gcgccaatgc aaaaaggcca
    29581 tccgtcagga tggcctttcg c
//
LOCUS       DAJVTL010000046        29595 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.046, whole genome shotgun sequence.
ACCESSION   DAJVTL010000046 DAJVTL010000000
VERSION     DAJVTL010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29595
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.046"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(86..1510)
                     /gene="degP"
                     /locus_tag="OQQ26_001928"
     CDS             complement(86..1510)
                     /gene="degP"
                     /locus_tag="OQQ26_001928"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HCS1857394.1"
                     /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
                     LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
                     GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
                     DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
                     ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
                     TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
                     VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
                     IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
                     LDSKPSVLALNIQRGDSTIYLLMQ"
     gene            complement(1640..3157)
                     /gene="dgt"
                     /locus_tag="OQQ26_001929"
     CDS             complement(1640..3157)
                     /gene="dgt"
                     /locus_tag="OQQ26_001929"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HCS1857395.1"
                     /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDEL
                     TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLYPEDAESQPLTDDRCSVAAL
                     RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS
                     HPDVEQLELQGYRVISGLLEIYRLLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR
                     HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            3241..3939
                     /gene="mtnN"
                     /locus_tag="OQQ26_001930"
     CDS             3241..3939
                     /gene="mtnN"
                     /locus_tag="OQQ26_001930"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HCS1857396.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     SLMVESLVQKLAHG"
     gene            3932..4732
                     /gene="btuF"
                     /locus_tag="OQQ26_001931"
     CDS             3932..4732
                     /gene="btuF"
                     /locus_tag="OQQ26_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
                     /protein_id="HCS1857397.1"
                     /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP
                     VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGI
                     KVMCVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL
                     QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP
                     DQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD"
     gene            4770..5393
                     /locus_tag="OQQ26_001932"
     CDS             4770..5393
                     /locus_tag="OQQ26_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HCS1857398.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
     gene            complement(5440..5784)
                     /gene="erpA"
                     /locus_tag="OQQ26_001933"
     CDS             complement(5440..5784)
                     /gene="erpA"
                     /locus_tag="OQQ26_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HCS1857399.1"
                     /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(5777..5842)
                     /locus_tag="OQQ26_001934"
     CDS             complement(5777..5842)
                     /locus_tag="OQQ26_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857400.1"
                     /translation="MAIIIGLEFAQLPMSFGAKYE"
     gene            complement(5866..7287)
                     /gene="clcA"
                     /locus_tag="OQQ26_001935"
     CDS             complement(5866..7287)
                     /gene="clcA"
                     /locus_tag="OQQ26_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HCS1857401.1"
                     /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
                     LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
                     EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
                     MVLDIFRLKGDEARHTLLATGVAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
                     FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM
                     QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
                     FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIA
                     GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILA
                     RTLAKQEAEQLARSKAASASENT"
     gene            7512..8792
                     /gene="hemL"
                     /locus_tag="OQQ26_001936"
     CDS             7512..8792
                     /gene="hemL"
                     /locus_tag="OQQ26_001936"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HCS1857402.1"
                     /translation="MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPE
                     FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAF
                     GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLSEVAQPGVHETLDELTSRLAEG
                     LLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
                     LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
     gene            complement(8827..10809)
                     /gene="fhuB"
                     /locus_tag="OQQ26_001937"
     CDS             complement(8827..10809)
                     /gene="fhuB"
                     /locus_tag="OQQ26_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HCS1857403.1"
                     /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
                     DIDFIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
                     ITVTTLWAIPGAMVSQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI
                     NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
                     DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR
                     LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
                     KVNDRVATERQHVLAFALAGGVLLIIAVVVALSFGRDAHGWTWASGALLDDLMPWRWP
                     RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
                     LPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
                     LTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTR
                     IALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
                     DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLKKQSR"
     gene            complement(10806..11696)
                     /gene="fhuD"
                     /locus_tag="OQQ26_001938"
     CDS             complement(10806..11696)
                     /gene="fhuD"
                     /locus_tag="OQQ26_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HCS1857404.1"
                     /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAVIDPNRIVALEWL
                     PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
                     SAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED
                     FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
                     STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG
                     ATLSAMHFVRVLDNAIGGKA"
     gene            complement(11696..12493)
                     /gene="fhuC"
                     /locus_tag="OQQ26_001939"
     CDS             complement(11696..12493)
                     /gene="fhuC"
                     /locus_tag="OQQ26_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HCS1857405.1"
                     /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
                     HNGSGKSTLLKMLGRHQPPTEGEILLDTQPLESWSSKAFARKVAYLPQQLPPAEGMTV
                     RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAEIMRGDTLEMIYGIPMGILPHPAGAAPVSFVY"
     gene            complement(12544..14733)
                     /gene="fhuA"
                     /locus_tag="OQQ26_001940"
     CDS             complement(12544..14733)
                     /gene="fhuA"
                     /locus_tag="OQQ26_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
                     /protein_id="HCS1857406.1"
                     /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
                     TAAPAPQENAWGPAATIAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEA
                     LGYTPGVTVSSRGASNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE
                     RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALD
                     DNGEFSYRLTGLARSINEQQKNSESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGY
                     YGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLR
                     FSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLT
                     GVDFMRMRNDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEW
                     NKWVFTLGGRYDWSKQATTVRENSYTPTEGYIERNDHQFTWRGGVNYLFDNGISPYFS
                     YSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDLPVVVTGAVYQLTKTNNLTA
                     DPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQV
                     PEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLA
                     RFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQVVATATFRF"
     gene            complement(14953..17487)
                     /gene="mrcB"
                     /locus_tag="OQQ26_001941"
     CDS             complement(14953..17487)
                     /gene="mrcB"
                     /locus_tag="OQQ26_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HCS1857407.1"
                     /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
                     PMPRKGKGKGKGRKPRGKHGWLWLLLKLAIVFVVLIAIYGVYLDQKIRSRIDGKVWQL
                     PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
                     FPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
                     SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
                     FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
                     FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
                     MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
                     EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
                     GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLV
                     DALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
                     FQTIAGGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
                     GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAM
                     LIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQNE
                     MQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
     gene            complement(17620..20049)
                     /gene="hrpB"
                     /locus_tag="OQQ26_001942"
     CDS             complement(17620..20049)
                     /gene="hrpB"
                     /locus_tag="OQQ26_001942"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HCS1857408.1"
                     /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTRLPLQLLAH
                     SGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG
                     VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD
                     NDRLQQMLPEAPVVISEGRSFPVERHYLPLPAHQRFDEAVAVATAEMLRQESGSLLLF
                     LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE
                     TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLH
                     LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLMAAKRL
                     LQMLGALDGERLSAQGQKMAALGNDPRLAAMLVSAKSDDEAATAAKIAAILEEPPRMG
                     NSDLGVVFSRNQPAWQQRSQQLLKRLNARGGEADSSLIAPLLAGAFADRIAHRRGQDG
                     RYQLANGMGAMLDADDALSRHEWLIAQLLLQGSASPDARILLALPVDIDELVQRCPQL
                     VQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL
                     NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLD
                     IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN
                     PTIAQGRVPLVLELLSPAQRPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPAN
                     TAPTRRTKKYS"
     gene            20123..20653
                     /gene="thpR"
                     /locus_tag="OQQ26_001943"
     CDS             20123..20653
                     /gene="thpR"
                     /locus_tag="OQQ26_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HCS1857409.1"
                     /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL
                     TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL
                     ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA
                     RGRTRYTPLKRWALTQ"
     gene            20668..21372
                     /gene="sfsA"
                     /locus_tag="OQQ26_001944"
     CDS             20668..21372
                     /gene="sfsA"
                     /locus_tag="OQQ26_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HCS1857410.1"
                     /translation="MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
                     ATRGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
                     GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
                     LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
                     ISAEGMALKKSLPVTL"
     gene            21550..22005
                     /gene="dksA"
                     /locus_tag="OQQ26_001945"
     CDS             21550..22005
                     /gene="dksA"
                     /locus_tag="OQQ26_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002209354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HCS1857411.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            22042..22968
                     /gene="gluQRS"
                     /locus_tag="OQQ26_001946"
     CDS             22042..22968
                     /gene="gluQRS"
                     /locus_tag="OQQ26_001946"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001432381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HCS1857412.1"
                     /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
                     ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
                     HEQELSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII
                     HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF
                     GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFS
                     VEQILQSAVKNWTLTAVPESAIVNSTFSNASC"
     gene            23007..24425
                     /gene="pcnB"
                     /locus_tag="OQQ26_001947"
     CDS             23007..24425
                     /gene="pcnB"
                     /locus_tag="OQQ26_001947"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HCS1857413.1"
                     /translation="MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQH
                     AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEY
                     HLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLL
                     ETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDE
                     EPSPRRRTRRPRKRAPRREGTA"
     gene            24422..24901
                     /gene="folK"
                     /locus_tag="OQQ26_001948"
     CDS             24422..24901
                     /gene="folK"
                     /locus_tag="OQQ26_001948"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HCS1857414.1"
                     /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTP
                     PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLF
                     GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDKLSKW"
     gene            25271..25855
                     /locus_tag="OQQ26_001949"
     CDS             25271..25855
                     /locus_tag="OQQ26_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1857415.1"
                     /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR
                     VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTTKMTFG
                     SVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKS
                     AVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ"
     gene            25960..26700
                     /locus_tag="OQQ26_001950"
     CDS             25960..26700
                     /locus_tag="OQQ26_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HCS1857416.1"
                     /translation="MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVN
                     VRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST
                     SLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL
                     ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVTG
                     LNGKASSAKVHFYAINDFGGAIEGNASL"
     gene            26735..29335
                     /gene="htrE"
                     /locus_tag="OQQ26_001951"
     CDS             26735..29335
                     /gene="htrE"
                     /locus_tag="OQQ26_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Yad fimbria usher protein HtrE"
                     /protein_id="HCS1857417.1"
                     /translation="MTIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQ
                     NASNIDLSRYSEGNPAIPGMYDVSVYVNDQPIINQSITFIEIEGKKNAQACITLKNLL
                     QFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMK
                     NYQNYVDPSLWENGINAAMLSYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASG
                     NYNWMTDSGSNYDFKNRYIQRDIASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRM
                     LPPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVT
                     VEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQILKDDIQDEPNLFQASYYYGLNN
                     YLTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKTYQGQSYRVSWN
                     KLFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNYSRMKNQVT
                     VSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSASWGSYSVSAQRSWN
                     EDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQMSSDFKGNNQLNVSNSGYSDNA
                     RVSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLAGSVSANSDNSRQVSLSTDGGFV
                     LHGGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTIDRWGYGVTSALSPYHENRI
                     ALDIKDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSTIMNITRSDGKNIPFAADI
                     YDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCLAHYQQSSEAEKIAQSI
                     ILNGIRCQIQ"
     gene            29352..>29595
                     /locus_tag="OQQ26_001952"
     CDS             29352..>29595
                     /locus_tag="OQQ26_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1857418.1"
                     /translation="MIKITPHKIAILMGILLSPSVFATDINVEFTATVKATTCNITLT
                     GNNVTNDGNNNYTLRIPKIGLDKIANKTTESQADFKL"
BASE COUNT         7396 a         7872 c         7267 g         7060 t
ORIGIN      
        1 gatgatgaag atgtatggag ttgtggcgaa gttcacagat tgtaaggaga accccttccc
       61 gtattcagga aggggttgag ggagattact gcattaacag gtagatggtg ctgtcgccgc
      121 gctgaatgtt cagtgccagc acagacggtt tgctgtcgag aactttacgc agttcagcga
      181 tgtttttcac tgcctgctgg ttcgcgccaa taatcacatc acctttcttc aggccgatct
      241 gcgcagccgg agtgcccgtc ttcacgttgt tcactaccac gccctgatct ttgcctttgt
      301 tgctcatctc agcgccttca atgccgttga agatggagct ggaatcaacc tgattctggc
      361 tgctctgctg cagttccagg ttcacgttaa cctgcttacc gtcgcgcagt aagcccaggg
      421 tcagtttgct gcccaccggc atagtaccca cctgagcacg cagtgcggca aagctgctaa
      481 tcggcttacc gttcagtgag gtgatcacat cacccgcttt aatgcccgct tttgcagcgg
      541 aggaattagg cagaacctgg cttacgaaag caccgcgctg ggcgtcaact ttcatcgctt
      601 tcgccagttc ggaattcaac tcagtcccca taatacccag ctcaccgcgt ttcacctggc
      661 cgtattccac catctgcgag gtcaggtttt tcaccatgtt actcgggata gcaaaaccga
      721 taccgatgtt gccgccgtcc ggtgcgagga tcgcggtgtt gataccgatc agttcgccgt
      781 tcaggttaac cagcgcacca ccggagttac cacggttgat cgctgcatcg gtctggatga
      841 agttttcgta gttttcagca ttcaggccgc tacgccccag cgcagagaca atcccggaag
      901 ttaccgtctc gcccagacca aacgggttac caatcgctac ggtgtaatca cccacgcgca
      961 gtgcatcaga atccgccatc ttaattgcgg tcaggttttt cgggttctgg atttggatca
     1021 gcgcgatatc agagcgcgga tctttgccaa ccatcttcgc gtcgaactta cgaccatcgc
     1081 tcagctggac tttaatcacc gtcgcgttat caacaacgtg gttgttggtg acgacatagc
     1141 ctttatcggc atcaatgatg acgccggaac ccagcgccat gaatttctgt tgctggccgc
     1201 caccattacc gccctggccc ccctggcaga acggagagct ctggaacgga gaaccttcct
     1261 ggcagaacgg agaatcatca ccgaagaact gctggaaatt acgcggcata cgcggcgtat
     1321 taacggttgt gctaccttct acgttaatgc tgaccactga aggcatcacc ttttcgagca
     1381 tcggtgcaag gcttggcatc tgctgggctg tcgttgctga agaagtctca gccgccgttg
     1441 cagagagcgg agataacgcc aaacctaaac tcagagccag tgcactcagt gctaatgtgg
     1501 tttttttcat gtatttcagt ctcgattaac agataacgca aaattgctgt gttcttcaga
     1561 ttcgttttat agcgcgaagt tccgaactaa agtttctgca aaaggtaaaa atttattgtt
     1621 cgtctttaca aaagcctggt tattgttcta cggccatcag acgtcggtat tcatcccacg
     1681 catagaggtc ggtcataccg ctgatataat cctgcagcag gcggcaacgg taataatatt
     1741 cccatagcgg aaactcagga gaatctgacg gtaatttact gacagcctcg acataggcca
     1801 gccgatggcg cgtcgagagt ttgtggaata agcgcgactc aatagggaaa cgtttcaccc
     1861 gttctttttc taccagttca gtaaagtctg ataacgacag gcttaataaa agacgataaa
     1921 tctctaataa tccgctaatg acccgatagc cctgcaattc aagctgctcg acatccggat
     1981 ggctaaacac atgttttaca gcgacatttt tatatagctt aagaagatcg ctgcattcgc
     2041 tggcatcttc caataatgca tgattaaacg ttccggcgaa aatcgcaggc agattatcaa
     2101 taaatcgttg tgccgcgtag ggtaccagtt tatttagggt gtttacccgt aaatacataa
     2161 aaaactgatc ttccgtactg cggcttaaac tatttgagcg tgatttttcc caggcatttt
     2221 caaccaccag cgaaaagagc gaacctttct catgctgacc ccacgcctcg tgcaaatgat
     2281 gataaagctg ctcaacggta aatattcttt tctctaccgc atcttcaagg tctgccacac
     2341 aataggagat gtcgtcggca gcttccataa tccacgttaa tggaaaacga ctgtaaagcg
     2401 ccaaattaag ttctttacgc aaccgggcaa tataggcttc ttcagaaaga taataacccg
     2461 gctttttcat taaatagtga tgtgtctcag gcgtttcgcc acgccaccac gccggacggg
     2521 tatattttaa aataccgcca acctgtgccc aggtgagatt catcctcatc aatgtatgca
     2581 ccagacgaat gccttgtgca ttcccctcaa aatgacataa gtcctgacga atcttgcgcc
     2641 gcagctcgtt aagcggttct tccccgtccc gtaaacgtag tgctgccacg ctgcagcgat
     2701 cgtcagtcag aggctggctt tcggcatctt ctgggtataa acgctggcga aaccagtcat
     2761 ttatcgccgc ttcgccaaaa tgaccaaacg gcggattgcc gatatcgtgc atcaggcatg
     2821 acatctcaac aatgctttca aaggggccgg tcagttcatc caggccgtat gcttccagta
     2881 atttaagctc tttcagacgg cttaaaattt ctttggcgat gtagcgcccc acctgctgga
     2941 cttccatcga gtgggtaaga cgcgtgcgca cggcggcatt gcgctccagt ggaaaaacct
     3001 gggtcttttg ttgcagacga cgaattgccg gagagttgat gatacgcccg cgatcgctct
     3061 cgaagatccg caggatctca tgttcggttt taacgccctg cggtgaacgg taacgacgat
     3121 gccagtttat tttttttcgg aaatcaatct gtgccatgtc ctctcccgcg tgagaaatac
     3181 gcttccccgt aagcgcatgg taaactatgc cttcaaatcg ggcttatcgc gagtaaatct
     3241 atgaaaatcg gcatcattgg tgcaatggaa gaagaagtta cgctgctgcg tgacaaaatc
     3301 gaaaaccgtc aaactatcag tctgggcggt tgcgaaatct ataccggcca actgaatgga
     3361 accgaggttg cgcttctgaa atcgggcatc ggtaaagtcg ctgcggcgct gggtgccact
     3421 ttgctgttgg aacactgcaa gccagatgtg attattaaca ccggttctgc cggtggcctg
     3481 gcaccaacgc tgaaagtggg cgatatcgtt gtctcggacg aagcacgtta tcacgacgcg
     3541 gatgtcacgg catttggtta tgaatacggt cagttaccag gctgtccggc aggctttaaa
     3601 gctgacgata aactgatcgc tgccgctgag gcctgcattg ccgaactgaa tcttaacgct
     3661 gtacgtggcc tgattgttag cggcgacgct ttcatcaacg gttctgttgg tctggcgaaa
     3721 atccgccaca acttcccaca ggccattgct gtagagatgg aagcgacggc aatcgcccat
     3781 gtctgccaca atttcaacgt cccgtttgtt gtcgtacgcg ccatctccga cgtggccgat
     3841 caacagtctc atcttagctt cgatgagttc ctggctgttg ccgctaaaca gtccagcctg
     3901 atggttgagt cactggtgca gaaactggca catggctaag tcactgttca gggcgctggt
     3961 cgccctgtct tttctcgcgc cactgtggct caacgccgcg ccgcgcgtca tcacgctttc
     4021 tcccgccaac actgaacttg cctttgccgc cgggatcacg ccggttgggg tcagcagcta
     4081 ttccgactat cctccacaag cgcaaaagat tgagcaggtt tccacctggc aggggatgaa
     4141 tctggaacgc attgtcgcgc tgaaacccga tctggtgatt gcctggcgtg gaggtaatgc
     4201 cgagcggcag gttgaccagc tggcttcgct gggaataaaa gtgatgtgcg tcgatgcgac
     4261 aagcattgaa caaattgcca atgcgttacg tcaattggcc ccctggagtc cgcaaccgga
     4321 taaggccgaa caagccgcgc aatccctgct ggatcagtac gcgcaattga aagcgcaata
     4381 tgctgataaa cctaaaaaac gtgtttttct gcaattcggc attaatccgc catttaccag
     4441 tggaaaagag tcgattcaaa accaggtact cgaagtttgt ggcggagaaa acatctttaa
     4501 agacagccgg gttccctggc cgcaagttag ccgcgaacag gtgttagcac gctcgccaca
     4561 ggcgattgtc attacaggcg gaccggacca aattcctaaa atcaaacaat actggggtga
     4621 acagctcaaa attcccgtta ttcctctcac gagtgactgg tttgaacgtg caagcccacg
     4681 tattatcctc gctgcacaac agctctgtaa tgcgctttca caggtagatt agcgcctgac
     4741 ctttttaggt gctcagtggg gattgaacaa tgctcgtcta ttggctggat atagtcggca
     4801 cagcggtatt tgccatctcc ggcgttttgt tagccggaaa attgcgtatg gacccttttg
     4861 gtgttctggt actgggcgtg gttaccgctg taggcggcgg gacaattcgc gacatggcgc
     4921 tggatcacgg cccggtattt tgggtgaaag atcccaccga tctggtcgtt gcaatggtaa
     4981 ccagcatgct gaccatcgtg ctggtgcgcc agccaagacg cttaccaaaa tggatgttgc
     5041 cggtgctgga cgccgttggt ctggcggtgt ttgtcggcat tggcgtgaat aaagccttta
     5101 atgcggaagc cggtccgtta atcgcggttt gtatgggcgt cattactggc gttggcggcg
     5161 ggatcattcg tgatgttctg gcccgcgaaa tccccatgat tttacgtaca gaaatctacg
     5221 caactgcctg tattatcggc ggtattgtcc acgctacggc ttattacaca ttttccgtac
     5281 cactggaaac agccagtatg atgggcatgg tcgtgacgct attgattcgg ctggcggcta
     5341 ttcgttggca tcttaagcta ccgacgtttg cgctggatga gaatgggcgt tgaagagaga
     5401 agatgtgctg gatagtttat ccggcacatg aacaacagat tagatgctaa aggaagaacc
     5461 gcaaccgcag gtgcttttcg cgttcgggtt ggtcacgatg aaacgagaac cttccagtcc
     5521 ttcggtatag tcaacggaac cgccgaccag atattgcagg ctcatcggat caaccaccaa
     5581 gccaacgccc tgtttttcga tggtcatatc gccttcgttc acctgatcat caaaggtgaa
     5641 accatactgg aagccgctgc aaccgccacc ggtgatatac acgcgtaatt tcagattcgg
     5701 gttatcttcg tcagcgatca ggcttttaac tttgttggct gctgcgtcgg taaactccag
     5761 cggcagtgct acgtcatcac tcatattttg ctccaaacga catcggcaat tgggcaaatt
     5821 ctaacccaat aataatcgcc attatctaat accttggtat ttcgttcaag tattctcgct
     5881 ggctgatgcg gccttgcttc gcgccagttg ctcagcttcc tgttttgcca gcgtgcgcgc
     5941 aagaatcgcc gagtatagcg gtttcccgcc ggtaaattgc gctaatagtg ttgcgccaag
     6001 accggtaata atcattggca aaatgagctg gtagttatcg gtcatctcca gaaccagaat
     6061 gatccccgtt aacggcgcgc gaatagatgc cgccagtaac gcccccattc cggcaatagc
     6121 aaacgtcccc gcctcaaggt gatattgcgg aaacagctca acggcaacca ttccgaaagc
     6181 ggttcccagc acagtaccca gcgccagcat cggggcaaaa ataccgcccg gcgcgccgga
     6241 agagaagcag agtaaggtgg taatgacccg cgcgacgaag ataaacacca gcattcccat
     6301 gctgaaattc cccgcggtag cgataggaat caggttaaaa ccgccgcccg acgttgctgg
     6361 tgccacaaac cccagcaatc cacacagacc gccaatcgca ccacccatca gtacccattt
     6421 ggtaatattg ccgccgtgca cacggtgcag caaatcctgc atccccagca cccatttatt
     6481 aaaaataggg ccgaaaatgc caaaaataat accgaggatc agataaagcc acagcgtatt
     6541 aagcggcgca tcagaaagtt taccgacgtc aatcaacgca acttcatgat taaaaatccg
     6601 gtacataatg gtcgacataa tgacgccaat aaataccgct tttatcgaaa ttaacgtata
     6661 gcgaaactgc ggacgcatct cttcgataat aaacaaaata cccgccagcg gcgcgttaaa
     6721 ggccgcagcc agccccgcag caacaccggt tgccagcagc gtatggcgag cttcatcacc
     6781 tttcaggcgg aaaatatcaa gcaccatacg gccaatgtta ccgccgatct gcacggttgg
     6841 cccttcgcgc cccaacacca tgcctccgcc gagtgtcccc agcccgccaa agaacttcac
     6901 cggcaataca cgccaccagc gaacgggacg ttgatcttcc agcgcccctt caatttccgg
     6961 gatccccgaa ccacctgctt ccggcgcgta tttgcgcacc aaaaagtagc caaacatcgc
     7021 cagcaccgcc gaacagagaa aagcgacggt taacagaagc ggataattat cagcagtatg
     7081 taccagcgcc cccatacgtt ggttctgcaa ccaggcgaca cctttgtcaa aagcaaccgc
     7141 tgccagccca acaagcgtgc cgacgactgc cgccataaac aaaatggcta acggggtttt
     7201 atcgcgctca agaagttggc gaatcagttg tctgcgtcgc aggcgcgcgg cttgcggtgt
     7261 ttctaaagag ggagtatcag ttttcatcca ataatcactt attggtcata caaataagat
     7321 gacggcattt tactcgcacg ttccatgaaa atcctttgca aagcgtaatg tttcaaatgc
     7381 acaaaacttt tatactctaa gaaatcagga ttgcaccagt acaagcagcc tgatgtttga
     7441 cgagtattta acttgttatg aataacatag aatagcagcc attcactttt tctacgaatc
     7501 aggaaccctc catgagtaag tctgaaaatc tttacagcgc agcgcgcgag ctgatccctg
     7561 gcggtgtgaa ctcccctgtt cgcgccttta ctggcgtggg cggcactcca ctgtttatcg
     7621 aaaaagcgga cggcgcttat ctgtacgatg ttgatggcaa agcctatatc gattatgtcg
     7681 gttcctgggg gccgatggtg ctgggccata accatccggc aatccgcaat gccgtgattg
     7741 aagccgccga gcgtggttta agctttggtg caccaaccga aatggaagtg aaaatggcgc
     7801 aactggtgac cgaactggtc ccgaccatgg atatggtgcg catggtgaac tccggcaccg
     7861 aggcgacgat gagcgccatc cgtctggccc gtggttttac cggtcgcgac aaaatcatta
     7921 aatttgaagg gtgttaccac ggtcacgctg actgcctgct ggtgaaagcc ggttctggcg
     7981 cactcacgtt aggccagcca aactcgccgg gcgttccggc agatttcgcc aaacatacct
     8041 taacctgtac ttataacgat ctggcttctg tacgcgccgc gtttgagcaa tacccgcaag
     8101 agattgcctg tattatcgtc gagccggtgg caggcaatat gaactgtgtt ccgccgctgc
     8161 cagagttcct gccaggtctg cgcgcgctgt gcgacgaatt tggcgcattg ctgatcatcg
     8221 atgaagtaat gaccggcttc cgcgtggcac tggctggcgc acaggattat tacggtgtgg
     8281 aaccggatct cacctgcctg ggcaaaatca tcggcggtgg aatgccggta ggcgcattcg
     8341 gtggtcgtcg tgatgtaatg gatgcgctgg ccccgacggg tccggtctat caggcgggta
     8401 cgctttccgg taacccaatt gcgatggcag ccggtttcgc ctgtctgagt gaagtcgcgc
     8461 aaccgggcgt tcacgaaacg ttggatgagc tgacatcacg tctggcagaa ggtctgctgg
     8521 aagcggcaga agaagccgga attccgctgg tcgttaacca cgttggcggc atgttcggta
     8581 ttttctttac cgacgccgag tccgtgacgt gctatcagga tgtgatggcc tgtgacgtgg
     8641 aacgctttaa gcgcttcttc catatgatgc tggatgaagg tgtttaccta gcaccgtcag
     8701 cgtttgaagc gggctttatg tccgtggcgc acagcatgga agatatcaat aacaccatcg
     8761 atgctgcacg tcgggtgttt gcgaagttgt gatgattttg cctcgcccac cgggcgaggc
     8821 attctattaa cggctctgct ttttcaacaa atagataaaa tatggcgcgc cgataaaggt
     8881 tgacagcagc cccgccggga tctggaatgg aaacagcacc atccgcccac accagtcagc
     8941 gaacaccagc agtaaaccac ccaccagcgc cgaaattacg atgtgtggca tcgtccgtcg
     9001 aaagcccatc atccgcgcaa tatgcggtgc cattaaacca acaaaactca acggtccaat
     9061 agtcatcgtc gcggtcgccg tcaggcaagc cgctaacagc agcagcgcaa ttcgcgtcgg
     9121 cgtcagcgcc attcctacgg ctcgggcggt atcaccaccc agcggtaaaa tggtcagcca
     9181 gcggcggcac agcggggtaa tcgccagcaa aatcaccatc acaattccgg tgcgccagac
     9241 ctgcgcatcg gtcgcgttgt aggtcgaacc ggaaatccag gtcagcactt gcgccattcg
     9301 cgggtcacca cttgcctgca acatcatcaa aagcatggtg aacgcggtgc ttaacgccat
     9361 ccccgccagt aacatgcggt gtggggaaaa tccaccgcgg ccggcggcga tcataatgat
     9421 caacaacgtc accgccgcgc cgagactgcc tgcaggtaac agccagccaa aggcattacc
     9481 cggcaccaga aacagcatca acaccacgcc aaaggccgcg ccggagctaa tccccagcac
     9541 ttccgggctt gccatcgggt tgccggtcag tcgctgaata atacagcccg ctaccgccag
     9601 catgacgccc gcaaacagcg ccgccataat tcgcggccag cgccagggca ttaaatcatc
     9661 gagcagcgcc ccgctcgccc acgtccagcc gtgcgcatca cgaccaaacg acagcgccac
     9721 caccacagca attatcagca gcacaccgcc agcaagggca aacgccagca catgttggcg
     9781 ttcagtcgcg acacgatcat tgaccttcat atccggcgca ctgatgctgc gtaaacgcgg
     9841 cagcagccac agtaacagcg gcgcacctat caacgccgtc accgaaccgg tggaaacttc
     9901 catccacacg cgagtcagcc agaggatgat ttgatcggaa agccagagga tcagcgcccc
     9961 aatcagcgac gccagcatca accgtggcaa caaacgccgc gcccccagca tttttgccag
    10021 cagcggcgcg aacaaaccga taaagccgat aatccccacc gcattcacca gcagcgcact
    10081 gatgactatc gccagcgaca gcgcagccag acgcgcaagc gataaggcca gaccgagatt
    10141 gcgcgccacg ccatcatcaa gccccatcag ggttaacgga cgaagtagca gtaacgtcag
    10201 catcacgccg cccagcagct gcggccataa acgctcaacg ccgccccagt cggtttgcgt
    10261 cagcgttccg gtgctccaca ggaacatgct ttgcaactgg tcatgatgga agataaccag
    10321 taactgattg attgccccac aataaaggct cactaccagc cccgcgagaa tcagcgttac
    10381 cggcgacagt cgtttccccc acgcgacgcc aaagacaatt aagccaacaa cgcaagcccc
    10441 tgccagcgca gcaaactggc tcaccatagc acctgggatc gcccagagcg tagtgacggt
    10501 aatccccagt tgcgcgcctg ttgcaacgcc caacgtcgtc ggttccgcca gcgggttacg
    10561 cagcacttgc tgaaacagca cgcccaccag ccccaggccc gcacctacca gcagcgaaat
    10621 cgccagacgc ggcaacaagc tgtagtgaaa aatcatctgc tcgatgaagt caatatccgg
    10681 cgaccaggca gcctgcgccc actggctacg cggcagcgcc tgcgagaagt tcatccaggt
    10741 gagcgccgta gcgacaatca ctaacagcgc cagcaataac gccggaaaaa gcgcaattcg
    10801 tttactcacg ctttaccacc gatggcgtta tccagaacgc gcacaaagtg cattgccgag
    10861 agcgtcgcac cataaaacca gactgcaggt acgcgctgaa agcgtccggc gcggacaaac
    10921 ggcatggcct gccacagcgg ggttgccatt agcgcatcca tgtctttgct gttgtcgtga
    10981 tcaaaacaga gcacatcaac gtctttatac gccgccagac gatcgatact gacggcggta
    11041 ctgccccaga agttggtttc cccttgccag gcatttggga tgccgtactc atcaagaatt
    11101 tcctggaaca agctgtttgg accgaagacc aacatatggc gcggatcgat aagcgtcgtc
    11161 agcaataacg ggcgtgcacc acgcttcaca aagcggggtt tcatgctgcg gataaagtct
    11221 tcatattgcg ctaaatgcgt ttctgctgcg ctttgcaggt taagtaaatc tgccatttcc
    11281 gtcagtgatt tacgcgccat cgccagcggc tgtttgccgt cgctgaagtt aaatccgcga
    11341 cccggcgcaa tacgtgccag catttctggt gaagggccat atcctgccga ccagaccata
    11401 aacgacggtt tcatttcggt cagcagttca aggttaggtt ctgtacgcaa accgacgtca
    11461 atcactgagt ccggcaatgg tggttcgctg acccacaggc gatagttgat ggtatccgcc
    11521 acgccgtaag gcacgatgcc tagcgccagc agtaattcca ccggcaacca ctccagcgcc
    11581 acaatacgat tggggtcaat aaccgccgcg tgggcggtat tcatctgcca taacaacgga
    11641 gaaagcgcca tcgccgttaa cagtcgacgg cgcgaaataa gaggtaagcc gctcatcaat
    11701 aaacaaaact cacaggtgca gcacccgccg gatgcggcaa aatacccatc gggatgccat
    11761 aaatcatttc gagggtatcg ccgcgcataa tttccgcagg cgttccctga gcaatcattt
    11821 caccaccgcg cagggcgacc agataatcac agtagcgtgc cgccatattg atatcgtgca
    11881 acacggcaat gaccgtcagg ccacgctcct gacttaaacg gtgcaccagc gccagcacat
    11941 caacctggtg ggcgatatcc agcgccgagg tcggttcgtc gagcaacaga caacggctat
    12001 cctgcgccac cagcatggcg atccacgccc gctgacgttc gccgccagag agactatcga
    12061 ccagccgatg cgccagcggt tttaagccaa ccagcgagat agcttcctcg actttttcgc
    12121 gatctgccgc cccaaagcgc cccagcgcgc catgccacgg gtaacgacca atcgccacca
    12181 gttcacgcac ggtcatccct tctgccggag gaagctgctg cggcaaataa gccactttgc
    12241 gggcgaacgc tttgctgctc cagctttcca gcggctgggt atcaagaaga atctcccctt
    12301 ccgtcggagg ctgatgacgg ccaagcattt tgagcagagt ggatttacca gaaccgttgt
    12361 gaccgatcag accggtcact ttcccggcag gaaaggttaa cgacagcgga tgcaaaagcg
    12421 tgcgcccggg cacacgaaag gagatattac gcagtgcaaa agtggtatcg gaatgattcg
    12481 tgtattcctg cataacagcc aacttgtgaa acgggcacgg aaatccgtgc cccaaaagag
    12541 aaattagaaa cggaaggttg cggttgcaac gacctgacgt tctgcgcccc agaagcagcc
    12601 ataagtctgg aagcaactgg caacatactc acgatcgagc aaattgttga cgttcacagc
    12661 aaggctggat cccgccatac caaagcgtgc cagatcatat tttacaacag catccattac
    12721 agctgcacta cccactttaa aagtgtttgc cggatcacca tagctggaac caataaaacg
    12781 accacctgtt cccaatgtta aaccagaaag cggcccttca ttgaaggtat aatcccccca
    12841 gagagatgcc atatgctccg gtacttgttc tggagtttta cctttgagat tggtgtcttt
    12901 ggtgtattcc gcatcggtgt aggtataaga agccgtcaag ttaatattgg catttaacgc
    12961 cgcttttgct tcaagttcca caccacgagc gcgaatctca cctgctggga cttgcgctaa
    13021 tgggtttgtt gggtctgctg tcaggttatt tgttttcgtc aattgataga ctgcgcccgt
    13081 aacaacgacc ggcagatcat tcggaacata ttttacgcca gcttcatact gttcaccttt
    13141 cgatggctta taggaaatgc gcgggttgct ccacagatcg aaagcactcg gttcaaagga
    13201 ctggctatag ctaaagtaag gtgaaatacc attatcgaat aagtaattta caccaccgcg
    13261 ccaggtgaac tgatgatcat tgcgctcaat ataaccttca gtcggcgtat aagagttttc
    13321 acgaacagtg gtcgcttgct tagaccaatc gtagcgtccc cccagagtga atacccattt
    13381 attccattcc gcctgatcct gaacataaat acctgtttgt ttgctttcat tcatctggta
    13441 tggctctgcg ctaccaaatg caaagtattc agggtgatat ttgttataaa gatcgatgga
    13501 tggtgcggat ccaaagctgg cattgatatc attacgcatc cgcatgaagt ctacccctgt
    13561 cagcaaagta tgctcgacgt cacctgtagc aaacttactt tcaagttggg tatcaacgct
    13621 aaagttttgt agacgctcat tatccaccac tgtcccgcgg tttagggtat gaccatcacc
    13681 agcaatccct gtgccataaa cacttttctg tgaggttttc atttcactga aacgcagatt
    13741 ctgacgcacg gtgaaggtgt cattaaaacc atgttcaaaa ctatatccca ccattttctg
    13801 gttacgggag tatgtattat tcgatgcacc ttcattgaag tcagtcggta gacgcttacc
    13861 attaggcaat ggctcaacgg tcccctcttt cggcaaccaa ccgtaataac ccgtttctgg
    13921 ttcattctgg aaataggaca ggaaagtaaa attggttttg tcgtctggac gccatgagaa
    13981 tgatggagca atggtataac gctgagattc agagtttttc tgctgttcgt ttattgagcg
    14041 agcgaggccc gtcaaacggt aagagaactc accgttatca tccagtgcat cactgaaatc
    14101 gaatccggtc tgaaacagat tatccgtccc cattttaaac tgaatttctt tcaggggttc
    14161 agtggtcgga cgcttactca ccatagaaat aatcccacca ggattacttt ttccatagag
    14221 aacagacgtc ggcccacgca tcagttcaac cctctcgagc atgtaaggat caatcacagc
    14281 atcgttataa aagttgccct gaagttttag tccatcaagg taattatttt gattcagacc
    14341 aacagatgag aaaccacgaa tgataacaaa atcatatgta ttagaagcac cacgactgct
    14401 aaccgtaacg ccaggtgtat aacctaatgc ttcttttaca gactgaaatt gatgcatctg
    14461 catctcttca tttgtcacaa ccgaaataga ctgcggcgtt ttttcaattg gtgtatccgt
    14521 tttagtcgca gtagcagagt gcttcgccgc aatagttgca gcaggccccc atgcgttttc
    14581 ttgcggcgca ggtgcagcgg taacggtgat agtgtcttct ttcggttcaa ccgctgcctg
    14641 tgcataaaca gacatgccgc taaccgctgt ggctactaca actgcgattt tacgcagtga
    14701 gtgttttggc tgagcagttt tggaacgcgc cattggtata tctctgatgt aaagtgaatg
    14761 ataacgcaaa cgagaatgat tattataaat ataagataat attcgaaacg ctggcgggtt
    14821 cgcaagcggt acgcaatctg agcgttcctg aagggttaat aaacaaccag atgaaaagaa
    14881 agggttaata ccttgggtgg gatgttattt taccggatgg caactcgcca tccggtatgt
    14941 cacgtttaga cgttaattac taccaaacat atccttgatc caaccggcta caccgtcgct
    15001 gtctttctgc tcttgctgag caggttgctg ttgcggctgt tgctgcggct gagaagactg
    15061 atcaaacgga ttgcctgacg gttgctgctg catctcattc tgctggcaca gcgattgcgg
    15121 atcgctggtc cagaccggca agacacgcat gccaccgctg caaacaaagt tgccgtcgta
    15181 gtccacgccc atatctgcaa tatcttctgg cggaacaaga ttcagcggtg ttggcgtctg
    15241 gttagccaga taacgctgat aaatcaacat tgccccgctg gctccataca gtttggtcgg
    15301 ctggttgtta tcacggccga cccaggtgat ggtcaccgtg ctgccgtcaa tgcccgcaaa
    15361 ccaggtatct acgttattgt tggtagtccc tgttttccct gccagatgca ggttcgggta
    15421 tttcgcccca agctgacgac ccgtaccgcg ttgtacaacc tgctgcatgg tccatagtgt
    15481 cagatacgcc gcctgcgccg gaacagcgcg ttccgcctgc gggaagctct gatacagcac
    15541 tttgccatct tccgcgatta ccgaacgcag tgcagaaagc ggtgcacggt taccaccgcc
    15601 ggcgatggtc tggaatgcct gcgccacttc gattggcgtt aagttcaacg cccccagcag
    15661 catcgccgga accggatgca gctgatcttt cggcacgccc agtttgatcc aggtctccgt
    15721 aaccgcaggc agccccagcg ccatccccag atttaccgtc ggcacgttca tcgaacgtgt
    15781 caacgcatcc accagcatca ctctgccgct ttcgctataa cgacggtcat cgttctgcgg
    15841 tgaccagacc tggccattcg gctgacgcag cgcgattggc gcatcggcaa tccacgtgtt
    15901 caggcgatag attttcggct ggcttaaagc cgtcagataa gtcgctggtt ttgcaaggga
    15961 accaatcgaa cgacgcgcct gcatcgcacg gttgtagccc gcaaactgcg gctcagaacc
    16021 tccgaccatc gcacgaactt caccactaaa gcggtcgacg accacaatcg cagtttcaag
    16081 atcgctcaac ttacgctgtt tcttcagtgc cggaatgcct tccacggcgg ctttttctgc
    16141 cgcgtcctgg gccaccgagt caaaggtagt gaagatcttc acgccggaga gatcttttac
    16201 cttatcgccc agttttgcct gcaactcctg acgcaccagc tgcataaagg ctggctgagg
    16261 agagatcacc ccaccgcgcg gctgaacccc cagcggacgg gcactcaaca tgtcatagag
    16321 ttcttgatca ataatctgtt gctgttgcag cagacgcagc accagattac gtcgctccag
    16381 cgccagtttc gggttacgcc acgggttgta gatggacgcc cctttcacca taccgactaa
    16441 cagcgcctgc tggtcgaggc ttagctcttc taccgggcga ccaaagtaat acaagcttgc
    16501 cagcgggaag ccgcggattt cgttgtcgcc gctctgaccg agatacacct cgttcatata
    16561 cagctcaaga atacggtctt tgctgtaacg cgcgtccatg atcagcgcca tgtaagcttc
    16621 gttcgcttta cgccagtaag aacgctcgct ggagaggaac aggtttttca ccagctgttg
    16681 cgtcagcgta ctcgcaccct gcaccgtgcg acctgcggtc aggtttgcca gcaccgcacg
    16741 tccgattgag tagagactga ttccatcatg ctcgtaaaaa tgacggtctt ctgtcgccag
    16801 caaagtatcc accagcaaat cagggaaacc actgcgcggc acaaacaaac gctgctcacc
    16861 gtttggcgag gagatcatgg tgatcagacg cggatcaaga cggaagaaac cgaactgacg
    16921 gttgttctcc atattgacga tcgtcgccag atgatcgcca tcaaaggtca gacgcgcacg
    16981 cacctgccct tctttgctgt ccgggaaatc aaacggacgg cggatcatct caatgctgtt
    17041 agcctgcacg gtaaattcgc caggacgggt cattttcgac acctgacgat actgggtcgc
    17101 ctccagcagc ttcaccatct cgttcttgct gatggtcatg tctggctcaa gattgaccat
    17161 tcggccataa actgccgcag gcagttgcca gaccttgcca tcaatacggc tacgaatttt
    17221 ttgatcgaga taaacgccgt aaatggcgat cagcacgaca aaaacgatag ccagttttag
    17281 cagtagccat agccagccgt gtttgccacg aggcttacgc cctttgcctt tgcccttacc
    17341 tttgcgcggc atcggttctt catcctcata gtcatcataa tcgtcgtaat catcgtcatc
    17401 ttcgtaacga cgacggctta ccttttgttt gaccggacgc gtcggtttcc ctttgcgtcc
    17461 aattggctcg cggtcattcc cggccatgct ttttctccgc aatattcagg cgcaaaggcc
    17521 cgattttctg ttcttctgtt gcaagacaga agaagatatc tctcaaaatt tgtgctcgat
    17581 cggtcccctc tcccttgagg gagagggaga aaaccaagct tacgaatact ttttcgtccg
    17641 tcgcgtcggt gccgtgtttg ccgggtcgtc cggccagacg tgtttgggat aacgcccttt
    17701 catctctttt tgcacctcac ggtacgctcc tttccagaag gcgctcaaat ctcgtgtgat
    17761 ttgcagtggc ctttgggcgg gtgaaagcaa ctccagcacc agcggcacgc gcccctgggc
    17821 gatcgtcgga ttggtggcct caccaaacat ctcctgcatt ctcaccgcca gcgcgggcgg
    17881 gttatcttca tgataacgaa tggcgatccg gcttcccgtc ggcacagtgt aatgcgcagg
    17941 caattcacta tccagacgtt gctgcattcc ccaatcaagt aatccgcgta gtgcctgata
    18001 aatgtcgagt gatttcaggc cgcgtagtga atgcacgccg gtcatatgtg gcagcagcca
    18061 cgtttccagc gtcgccaaca aactttcatc atcaaccgct ggccagtcat attccggcaa
    18121 ccactttgcg gcgcataaca aacgcaagcg tagctgttcc gcttccgccg tccagttgag
    18181 cacgcttaaa cctttatcac ggatgccatt aagcatcgcc tgatgcaact cgtcttctga
    18241 cggtttcgcc agcggctgca ctttcaccgt caactgaccg atttgtagcc gacgccaggc
    18301 tttcagcgta ccttgcgcgt catcccattc cacggtgtca gattgctgca ccagctgcgg
    18361 acagcgttgt actaattcat caatatcgac cggtagcgcc agtaaaatcc gcgcatccgg
    18421 cgaggcgctg ccctgcaata ataactgtgc gatcaaccat tcgtggcggc ttagcgcgtc
    18481 gtcggcatcg agcatcgctc ccatgccgtt tgccagttga tagcgtccat cttgcccacg
    18541 gcgatgagca atgcgatcgg caaacgcccc ggcaagtagc ggcgcgataa gcgaactgtc
    18601 tgcctcaccg ccgcgtgcgt ttaagcgttt taacagttgc tgactacgtt gctgccaggc
    18661 tggttgattg cgcgaaaaca ccacgcccag gtcactattg cccatccgtg gcggctcttc
    18721 gagaatggcg gcaatttttg ccgcggtagc agcttcgtcg tcgctctttg cgctaaccag
    18781 cattgccgct aaacgcggat cgttacccag cgctgccatt ttttgccctt gcgcactaag
    18841 ccgttcaccg tccagcgccc ccagcatttg taacagacgt ttcgcggcca ttagattcac
    18901 tactggcggt tgatccagcc agctcatctg cgccggatcg ctgcatcccc attgcagtaa
    18961 ttccatcagc aaaccggaaa gatcgctttg taagatctcc ggttcacttt gcgcggcagc
    19021 gcgttctgct tgttctttgg cgattaaatg caggcagata cccggctcca gacgcccggc
    19081 gcgcccggca cgctgcgtca tggatgcctg gctaacgcgt tgagtaatca gtcgcgtaag
    19141 ccccgtgcgc ggatcaaaac gcgccacacg ctcctgggca caatccacca ccagacgaat
    19201 accttcaatg gttaaactgg tttcagcaat attggtcgcc agcaccactt tgcgcatccc
    19261 ttgcggtgcc gggaggatcg cttttcgctg atcgttcagc gacaacgcgc catacagcgg
    19321 gcagagcaac acatcactgc cgatgcgcga agccagttgt tcctgcacac gctgaatttc
    19381 tccgacgcca ggtaaaaata acagtaatga tccgctttcc tgacgcagca tttcggcggt
    19441 ggctaccgca acggcttcgt caaaacgctg atgcgcgggc agcggtaaat aatggcgttc
    19501 aaccggaaac gagcgccctt ctgagatgac gacgggcgct tctggcagca tttgctgcaa
    19561 gcggtcgtta tccagcgtag ccgacataat cagcagttta aggtcatcac gcagaccttg
    19621 ttgcacatcg agtaatagcg ccaacgccaa atccgcctgc aagctgcgct catgaaattc
    19681 atcaaggatc accaatccaa caccgctcaa ctccgggtca cgctggatca tccgcgtcag
    19741 cacgccttcg gtaactactt ccaggcgggt atttggcccg acgcagtttt gcgcacgcat
    19801 ccggtagcca acggtatcgc ctggcttttc gttaagcagc tccgccagcc gttgcgcgac
    19861 gttacgcgcc gccaaacgac gcggctccaa caggataatt ttcccgttaa tgccggaatg
    19921 cgccagcagt tgcagcggca gccgggttga tttcccggcc ccggtcggcg cacttaataa
    19981 tacctgcggc gcacaatcga gagcggtaag taattcaggt aagacggcag caacgggcaa
    20041 cgacgacaca aaacgctcca gagggttaac attcttcgcg ccacattgta gcatcgcggt
    20101 aattcataac cgagtgcctc acatgtctga accgcaacgt ctgttctttg ctatcgactt
    20161 acctgcagaa atccgcgaac agattatcca ctggcgcgcc acacacttcc cacctgaggc
    20221 gggacgtccg gtcgccgccg ataatttgca tctgactctg gcatttttag gcgaagtgag
    20281 cgcagagaaa gagaaggcgc tttctctttt agccggacgg attcgtcaac ctggtttcac
    20341 actcacgctt gatgacgccg gacaatggct gcgttcgcgt gtggtgtggt tagggatgcg
    20401 tcagccgcca cgcggcttaa tccagctggc gaatatgctc cgttcacagg ctgcccgcag
    20461 cggttgtttt caaagcaatc gtccgtttca tccacatatt accttattgc gcgacgccag
    20521 cgaggcggtg acaatcccgc cgccaggttt taactggtct tatgcggtga cggagttcac
    20581 cctttacgcc tcctcgtttg cccgtggacg cacacgctac acgccgctaa aacgctgggc
    20641 gctaacgcaa taacaaggat tgtcgcaatg gaattctctc cccctctaca gcgcgcgacg
    20701 ctaattcagc gttacaaacg ttttttagcc gatgtgatca cacccgatgg tcgcgaatta
    20761 acgctacact gcccgaatac gggtgcgatg accggttgtg caacgcgtgg cgataccgtc
    20821 tggtattcga cttcagacaa caccaaacgg aaatacccac acacctggga actaactcaa
    20881 agccagagcg gcgcatttat ttgcgtcaat acgctttggg ctaacaggtt gacgaaagag
    20941 gctatcctta atgaatcaat ttcagaactc tcaggctata gctcgctgaa aagcgaagta
    21001 aaatacggcg cagaacgcag ccgtattgac tttatgttgc aggcggattc gcgtccagac
    21061 tgctatattg aagtgaaatc ggttacgtta gcggagaacg aacagggata ttttcccgat
    21121 gcggtcactg aacgaggtca gaaacacctt cgggagttga tgagcgtagc ggctgaaggc
    21181 cagcgtgcgg ttatcttttt cgccgtgctg cattcagcca ttacacggtt ttcacccgcg
    21241 cgccacatcg atgagaaata cgcgcaacta ttgtcagaag ctcaacagag gggggtagaa
    21301 attctggctt acaaagcgga aatttctgct gaaggcatgg ctcttaaaaa atcactgccg
    21361 gttacattgt agtaaagtaa gtaactggtt aatttacatt ctggtcgcgt gcgcaaatac
    21421 gcttttcctc acacagttgt caagtgttac gtttagataa ttgctatccg gaaaagcatc
    21481 tgctatttat agcggcctca tttttccccc gaacatgggg atcgatagtg cgtgttaagg
    21541 agaagcaaca tgcaagaagg gcaaaaccgt aaaacatcgt ccctgagtat tctcgccatc
    21601 gctggggtgg aaccatatca ggagaagccg ggcgaagagt atatgaatga agcccagctg
    21661 gcgcacttcc gtcgtattct ggaagcatgg cgtaatcaac tcagggatga agtcgatcgc
    21721 accgttacac atatgcagga tgaagcagcc aacttcccgg acccggtaga ccgtgcagcc
    21781 caggaagaag agttcagcct cgaactgcgt aaccgcgatc gcgagcgtaa gctgatcaaa
    21841 aagatcgaga agacgctgaa aaaagtggaa gacgaagatt tcggctactg cgaatcctgc
    21901 ggtgttgaaa ttggtattcg ccgtctggaa gcgcgcccga cagccgatct gtgcatcgac
    21961 tgcaaaacgc tggctgaaat tcgcgaaaaa cagatggctg gctaattaca gccgttccat
    22021 cacgtttacc acaggcggga aatgctcccg ccttattttt tgttcaaaga gatgacagac
    22081 acacagtata ttggccgctt cgccccctct ccttccggcg agcttcattt tggctctctg
    22141 atcgccgcgc tcggcagcta tttgcaggct cgcgcccggc aaggtcgctg gctggtacgc
    22201 atagaagata tcgacccgcc tcgtgaagtt cccggtgccg cagaaactat cctgcgccag
    22261 ctggaacatt acggtctgca ctgggacggc gatgttctct ggcaatcgca acgtcacgac
    22321 gcctatcgtg aagcactcgc ctggttacat gaacaagaac taagttatta ctgcacctgt
    22381 acgcgtgcgc gtattcaaag cattggcggt atttacgacg gtcattgccg ggtgttgcat
    22441 catggaccag acaacgccgc agtgcgtatc cgccagcagc atccggtcac gcaatttact
    22501 gaccagctgc gcggcattat tcacgccgac gaaaaactgg cacgggaaga ttttatcatt
    22561 catcgccgtg atgggttgtt cgcctacaac ctggctgttg tggttgatga tcatttccag
    22621 ggcgttacag aaatagtgcg tggggctgat ctgattgaac caacagtaag gcaaatctcg
    22681 ctgtaccagc tttttggctg gaaagtgcca gattacattc atctgccgct ggcgcttaat
    22741 ccacaaggcg ctaaactttc caagcagaat catgcgcctg cgttgccgaa aggcgatcca
    22801 cgcccggtac taatcgcggc acttcaattt ctggggcagc aggcagaagc acactggcag
    22861 gatttcagcg tcgagcaaat ccttcagtca gccgtcaaaa actggacgct gaccgccgtg
    22921 cccgagtcgg caattgtaaa ttcaacattc tcaaatgcgt catgctgagc tatgattagc
    22981 cgctattttt ttgtcctgaa tgatgtttga cactaccgag gtgtactatt tttacccgag
    23041 tcgctaattt ttgccgcaag gtgctaagcc gcgaggaaag cgaggctgaa caggcagtcg
    23101 cccgtccaca ggtgacggtg atcccgcgtg agcagcatgc tatttcccgc aaagatatca
    23161 gtgaaaatgc cctgaaggta atgtacaggc tcaacaaagc gggatacgaa gcctggctgg
    23221 ttggcggcgg cgtgcgcgac ctgttacttg gcaaaaagcc gaaagatttt gacgtaacca
    23281 ctaacgccac gcctgagcag gtgcgcaaac tgttccgtaa ctgccgcctg gtgggtcgcc
    23341 gtttccgtct ggctcatgta atgtttggcc cggagattat cgaagttgcg accttccgtg
    23401 gacaccacga aggtaacgtc agcgaccgca cgacctccca acgcgggcaa aacggcatgt
    23461 tgctgcgcga caacattttc ggctccatcg aagaagacgc ccagcgccgc gatttcacta
    23521 tcaacagcct ctattacagc gtagcggatt ttaccgtccg tgattacgtt ggcggtatga
    23581 aggatctgaa ggacggcgtt atccgtctga ttggtaaccc ggaaacgcgc taccgtgaag
    23641 atccggtacg tatgctgcgc gcggtacgtt ttgccgccaa attgggtatg cgcatcagcc
    23701 cggaaaccgc agaaccgatc cctcgcctcg ctaccctgct gaacgatatc ccaccggcac
    23761 gcctgtttga agaatcgctt aaactgctac aagcgggcta cggttacgaa acctataagc
    23821 tgttgtgtga atatcatctg ttccagccgc tgttcccgac cattacccgc tacttcacgg
    23881 aaaatggcga cagcccgatg gagcggatca ttgaacaggt gctgaagaat accgatacgc
    23941 gtatccataa cgatatgcgc gtgaacccgg cgttcctgtt tgccgccatg ttctggtacc
    24001 cactgctgga gacggcacag aagatcgccc aggaaagcgg cctgacctat cacgacgctt
    24061 tcgcgctggc gatgaacgac gtgctggacg aagcctgccg ttcactggca atcccgaaac
    24121 gtctgacgac gttaacccgc gatatctggc agttgcagtt gcgtatgtcc cgtcgtcagg
    24181 gtaaacgcgc atggaaactg ctggagcatc ctaagttccg tgcggcttat gacctgttgg
    24241 ccttgcgagc tgaagttgaa cgtaatgctg aactgcagcg tctggtgaaa tggtggggtg
    24301 agttccaggt ttccgcacca ccagatcaaa aagggatgct taacgagctg gatgaagaac
    24361 cgtcaccgcg tcgtcgtact cgtcgtccac gcaaacgcgc accgcgtcgt gagggtaccg
    24421 catgacagtg gcgtatattg ccataggcag caatctggcc tctccgctgg agcaggtcaa
    24481 tgctgccctg aaagcattag gcgatatccc tgaaagccac attcttgccg tttcttcgtt
    24541 ttaccgcacc ccaccgctgg ggccgcaaga tcaacccgat tacctcaacg ccgccgtggc
    24601 gcttgaaact tcgctcgccc cggaagagtt actcaaccat acacagcgca tagaactgca
    24661 acagggtcgt gttcgtaaag ctgaacgctg gggaccacgc acgctggatc tcgatatcat
    24721 gctgtttggt aatgaagtga taaataccga acgcctgacc gttccgcact acgatatgaa
    24781 gaatcgtgga tttatgctgt ggccgctgtt tgagattgca ccggagctgg cgtttcctga
    24841 tggggagacg ttgcgtgaag tcttacatac aagagcattt gacaaattaa gcaaatggta
    24901 atttatttat attacgaata taaatatttt ctgaaaatca tacatcctct ctttccttaa
    24961 taaaaatttt agtttaaaca tttttgcaga aacataatat aaattcccgc agataaatat
    25021 caatcccatc gccataccct aaccaattgc acttgtgaat ttatttttgc ttaattttga
    25081 attaagaaaa tttaatttgt tcaaaagccc ttaaagtgca caataggcgt cctaatgaac
    25141 aatggttgta aattttggta acaaatatca ttgctcatta atatctagca tctgcttata
    25201 acatttgtgt catgaatagt cattcttcaa accagtagtc tgactaatgg aattttattc
    25261 aaggattttt atgtctaaaa aattaggttt tgccctgtct ggtcttatgc tggcaatggt
    25321 tgcaggtact gcttctgctg atatggatgg tggtcagtta aatatcagtg gtctggttgt
    25381 tgataacacc tgtgaaaccc gcgttgacgg cggtaataaa gatggtctga tcctgctgca
    25441 aactgcaact gttggtgaaa tcgatgctgg cgtgctgaat gacaccgttg gcgctaaagc
    25501 caaacctttc agcatcaccg ttgactgcag caaagcaaat ccgaatccag gtagtacaac
    25561 taaaatgacc ttcggttctg ttttctttgg taatagcaaa ggaacgctga acaacgacat
    25621 gtctattaac aacccgtctg acggcgtgaa tatcgctctg cacaatattg atggttccac
    25681 tatcaaacag gttcaaatta acaaccctgg cgatgtgtat actaaagccc tggatgcaac
    25741 gacaaaatct gctgtttatg attttaaagc gtcttacgtt cgtgccgtcg cagaccaaac
    25801 agcaactgct ggttatgtaa aaactaacac tgcatacacc attacttatc agtaagtatt
    25861 caccaattaa attgattgaa tgaatataca gggaatagtg ttaataattt ctatttttat
    25921 attattccct gttttaatta actctgtcag ggatggttta tgttttttaa caccaaacat
    25981 acaacagctt tatgcttcgt aacctgtatg gcttttagtt catcgtctat tgcggacatt
    26041 gtcatttcgg gtactcgcgt aatatataaa agcgatcaaa aaagtgtcaa cgtacgtctg
    26101 gaaaataaag ggaataaccc gttgcttgtc cagagttggt tagatactgg cgatgacaac
    26161 gctgagccag gcagtattac agtccctttt actgccacgc cgccagtatc gcgtattgat
    26221 gccaaacgtg ggcaaacaat caaattaatg tacacagcca gcacctcact gcctaaagac
    26281 agagagagcg tgttctggtt taacgtactg gaagttccac caaaaccaga tgcagaaaag
    26341 gtcgcgaatc aaagtctgct gcaactggca tttcgcacac gtataaaact tttctatcgc
    26401 ccggatggat tgaagggaaa tccctctgaa gccccgttag ccctgaagtg gttctggtca
    26461 ggttcagaag gtaaggcgtc attgcgagtg accaatccaa ccccttacta cgtctctttt
    26521 agcagtggtg atttagaagc tagcggtaaa cgctatccga ttgatgtaaa aatgattgca
    26581 ccatttagtg atgaggtcat gaaagtcact ggccttaatg gcaaagcaag ttctgcaaaa
    26641 gtacattttt acgccattaa tgattttggt ggcgccattg aaggtaatgc cagtctgtaa
    26701 tcaggcaagg atataattcc gcaggaagca taacgtgact ataaaaccaa ctaaaaatta
    26761 tcataatcat ctgacccgta tcgctacgtt ttgcgcgctg ctgtattgca atagtgcttt
    26821 ctgtgctgaa cttgttgaat atgaccatac cttcctgatg gggcagaatg cctcaaatat
    26881 tgatctcagc cggtatagtg aaggtaaccc tgctataccg ggtatgtacg acgtcagtgt
    26941 ttatgtcaac gatcaaccta ttattaacca aagcattaca tttattgaaa ttgaaggaaa
    27001 aaaaaacgca caagcctgta tcacacttaa gaatttattg cagtttcata taaattctcc
    27061 cgatataaat aacgaaaaag ccgttctgct tgccagggat gaaacactcg gcaattgcct
    27121 taatttgacg gaaattatcc ctcaggcttc tgttcgttat gacgttaacg agcaacgtct
    27181 ggatatagac gttcctcagg catgggtaat gaaaaattac caaaactatg ttgatccatc
    27241 gttatgggaa aatggcatta atgcggccat gttgtcatac aacctcaacg gatatcatag
    27301 tgaaactcct ggtcgaagaa atgacagcat ttatgctgct tttaacggtg ggatgaattt
    27361 aggtgcatgg cgactgcgtg cctcaggcaa ctacaactgg atgaccgatt ctggcagtaa
    27421 ttatgatttt aagaatcggt atatacagcg tgatatcgcc tcgctgcgtt ctcaactcat
    27481 tcttggtgag tcttatacaa cgggcgaaac ctttgattct gtcagtatcc gcggcattcg
    27541 tttatacagc gacagccgca tgttgcctcc gacattagcg agttttgcgc ctatcattca
    27601 tggcgttgct aataccaacg ccaaagtcac tattacgcaa ggtggctata agatttatga
    27661 aacgactgtg ccgccaggcg ctttcgtcat tgatgatctg agtccgtcag gttacggcag
    27721 cgatcttatt gttaccgtcg aagagtccga tggctcaaag cggacattct cgcaaccttt
    27781 ttcatcggtt gttcaaatgt tacgcccagg cgttggacgt tgggatatta gcggcggtca
    27841 gattttaaaa gatgatattc aggatgagcc taatttattt caggccagct actactacgg
    27901 tctgaataac tatctaacgg gttataccgg tattcagatt accgataata actataccgc
    27961 tggtttgtta ggtcttggtc tgaatacttc agtcggtgca ttttctttcg atgtgactca
    28021 ctccaatgtt cgtataccgg atgataaaac atatcaggga caaagttatc gtgtttcctg
    28081 gaacaagtta ttcgaagaaa caagtacttc actgaatatc gcggcctatc gctattcgac
    28141 acagaattac cttggtctta atgatgcact aactctaatt gatgaagtga aacatcccga
    28201 acaagatctt gaaccgaaat ccatgcgtaa ttactcgcgc atgaaaaatc aggttacggt
    28261 cagtattaac caaccgctaa aatttgagaa aaaagattac ggttcatttt atctttccgg
    28321 aagttggtcc gattactggg cttccggaca aaatcgtagc aattactcta ttggctacag
    28381 taacagtgca tcctggggca gctacagtgt cagtgcccag cgttcatgga atgaagacgg
    28441 cgacactgac gatagcgttt atctcagttt caccattcct attgaaaaat tacttggcac
    28501 tgaacaacgg acttcaggtt tccagagtat tgatactcaa atgagcagtg actttaaggg
    28561 taataaccaa ctcaacgtca gtaacagtgg ctatagtgat aacgctcgcg tcagttatag
    28621 cgtaaatact ggctatacga tgaataaagc cagcaaagat ttgagttatg ttgggggtta
    28681 tgccagctat gaatcaccgt ggggaaccct ggcaggttca gtttctgcaa atagcgataa
    28741 cagtcgtcaa gtgtctctca gcaccgacgg tggttttgta ttgcatggcg gcggcctgac
    28801 cttcagtaat gacagtttta gcgactccga tacactggcg gtagttcagg ctccaggtgc
    28861 tcaaggagcg cgaataaatt atggcaacag tactatcgat cgatggggtt atggtgtcac
    28921 cagcgctctt tctccttatc atgaaaaccg tatcgcgctg gatatcaaag atcttgagaa
    28981 cgatgttgaa ttaaaaagta ccagtgcagt agctgtaccg cgtcagggtt cagtcgtctt
    29041 tgctgatttt gaaaccgtgc aagggcaatc aaccattatg aacatcacac gaagtgatgg
    29101 taaaaatatt ccatttgctg cagatattta tgatgagcaa ggcaatgtca ttggtaatgt
    29161 tggacagggt ggacaagcat ttgttcgtgg tattgagcag cagggaaata tcagcattaa
    29221 atggctcgaa gaaagtaaac ccgtaagttg tcttgcgcat tatcaacaaa gttcagaagc
    29281 agaaaaaata gcgcaatcta ttattctgaa tggaattcgg tgtcagattc agtaactaca
    29341 agggacgtca aatgataaaa ataacgccac ataaaatagc gatactgatg ggaatattat
    29401 tatcaccctc agtatttgca acggatatta atgtagagtt tacagccact gtcaaagcaa
    29461 caacctgtaa catcacactt actggtaata acgtcacgaa tgatggcaat aataactaca
    29521 cattgagaat ccctaagatt ggtctggata agatcgcgaa taaaacgaca gaatctcagg
    29581 ctgattttaa actgg
//
LOCUS       DAJVTL010000047        29333 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.047, whole genome shotgun sequence.
ACCESSION   DAJVTL010000047 DAJVTL010000000
VERSION     DAJVTL010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29333
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.047"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            486..2144
                     /locus_tag="OQQ26_001953"
     CDS             486..2144
                     /locus_tag="OQQ26_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HCS1857419.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
                     CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA
                     KGTLQLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
                     HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
                     HRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
     gene            complement(2141..3098)
                     /locus_tag="OQQ26_001954"
                     /pseudo
     CDS             complement(2141..3098)
                     /locus_tag="OQQ26_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322270.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
     gene            3249..4364
                     /gene="macA"
                     /locus_tag="OQQ26_001955"
     CDS             3249..4364
                     /gene="macA"
                     /locus_tag="OQQ26_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308991.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HCS1857420.1"
                     /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
                     DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
                     EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQI
                     GTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
                     DMSTMLVKAQVSEADVIHLKAGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
                     ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
                     EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
     gene            4361..6307
                     /gene="macB"
                     /locus_tag="OQQ26_001956"
     CDS             4361..6307
                     /gene="macB"
                     /locus_tag="OQQ26_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HCS1857421.1"
                     /translation="MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYVGEMVAIVGASG
                     SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT
                     AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
                     NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRD
                     GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
                     LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
                     DLIAIQKQPWVASATPAVSQNLCLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
                     EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
                     RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
                     GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
                     DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVT
                     GILFGWLPARNAARLDPVDALARE"
     gene            complement(6380..6604)
                     /gene="cspD"
                     /locus_tag="OQQ26_001957"
     CDS             complement(6380..6604)
                     /gene="cspD"
                     /locus_tag="OQQ26_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HCS1857422.1"
                     /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
     gene            6927..7247
                     /gene="clpS"
                     /locus_tag="OQQ26_001958"
     CDS             6927..7247
                     /gene="clpS"
                     /locus_tag="OQQ26_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HCS1857423.1"
                     /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            7278..9554
                     /gene="clpA"
                     /locus_tag="OQQ26_001959"
     CDS             7278..9554
                     /gene="clpA"
                     /locus_tag="OQQ26_001959"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HCS1857424.1"
                     /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYVERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
                     SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
                     ELTYGFQSAQKHKAEAAH"
     gene            complement(9899..9986)
                     /locus_tag="OQQ26_001960"
     tRNA            complement(9899..9986)
                     /locus_tag="OQQ26_001960"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9950..9952),aa:Ser,seq:gga)
     gene            complement(10240..10458)
                     /gene="infA"
                     /locus_tag="OQQ26_001961"
     CDS             complement(10240..10458)
                     /gene="infA"
                     /locus_tag="OQQ26_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HCS1857425.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(10743..11447)
                     /gene="aat"
                     /locus_tag="OQQ26_001962"
     CDS             complement(10743..11447)
                     /gene="aat"
                     /locus_tag="OQQ26_001962"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HCS1857426.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
                     GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC
                     ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
                     RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
                     LPNNFWVPRCLFSPQE"
     gene            complement(11489..13210)
                     /gene="cydC"
                     /locus_tag="OQQ26_001963"
     CDS             complement(11489..13210)
                     /gene="cydC"
                     /locus_tag="OQQ26_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HCS1857427.1"
                     /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
                     ASAVAGVAGLYNFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDF
                     TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
                     SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVA
                     DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEIL
                     RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT
                     TESQILELLAEMMHEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
                     YQFKQGL"
     gene            complement(13211..14977)
                     /gene="cydD"
                     /locus_tag="OQQ26_001964"
     CDS             complement(13211..14977)
                     /gene="cydD"
                     /locus_tag="OQQ26_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HCS1857428.1"
                     /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
                     MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
                     SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
                     DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
                     PQRGEVELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
                     LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
                     SEHELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL
                     LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDIIWVMQDGQIIEQGR
                     YAELSVAGGPFATLLAHRQEEI"
     gene            complement(15100..16065)
                     /gene="trxB"
                     /locus_tag="OQQ26_001965"
     CDS             complement(15100..16065)
                     /gene="trxB"
                     /locus_tag="OQQ26_001965"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HCS1857429.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
                     TGIRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
     gene            16609..17103
                     /gene="lrp"
                     /locus_tag="OQQ26_001966"
     CDS             16609..17103
                     /gene="lrp"
                     /locus_tag="OQQ26_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HCS1857430.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            17238..21368
                     /gene="ftsK"
                     /locus_tag="OQQ26_001967"
     CDS             17238..21368
                     /gene="ftsK"
                     /locus_tag="OQQ26_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HCS1857431.1"
                     /translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
                     SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIALLCVWAAGLTLFTGWSWVTIAEKIGGWILNILTFASNRTRRDDTWVDEDEYE
                     DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDE
                     EITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA
                     APVEPVTQTPPVASVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQ
                     YNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYAPAPEQPVAGNAWQAE
                     EQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYY
                     FEEVEEKRAREREQLAAWYQPIPEPVKEPEPVKSSLKAPSVAAVPPVETAAAVSPLAS
                     GVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYG
                     IKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQH
                     DVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGP
                     HEPLFTPIVEPVQQPQQPVTPQPQYQQPQQQVAPQPQYQQPQQPVAPQQQYQQPQQPV
                     APQPQYQQPQQPVAPQPQYQQPQQPVTPQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQ
                     PVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARL
                     VEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVV
                     EVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAK
                     MPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTE
                     VVTDMKDAANALRWCVNEMERRYKLMSALGVRNLVGYNEKIAEADRMMRPIPDPYWKP
                     GDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQ
                     RPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPV
                     RVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAV
                     QFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPLPFD"
     gene            21527..22138
                     /gene="lolA"
                     /locus_tag="OQQ26_001968"
     CDS             21527..22138
                     /gene="lolA"
                     /locus_tag="OQQ26_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HCS1857432.1"
                     /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGCDGTIHQ
                     FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
     gene            22149..23492
                     /gene="rarA"
                     /locus_tag="OQQ26_001969"
                     /gene_synonym="mgsA"
     CDS             22149..23492
                     /gene="rarA"
                     /locus_tag="OQQ26_001969"
                     /gene_synonym="mgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein
                     RarA"
                     /protein_id="HCS1857433.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEVNDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
                     QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
                     HDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
     gene            23583..24875
                     /gene="serS"
                     /locus_tag="OQQ26_001970"
     CDS             23583..24875
                     /gene="serS"
                     /locus_tag="OQQ26_001970"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HCS1857434.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
                     ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
                     HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKPDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            25114..27559
                     /gene="dmsA"
                     /locus_tag="OQQ26_001971"
                     /pseudo
     CDS             25114..27559
                     /gene="dmsA"
                     /locus_tag="OQQ26_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415414.4"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
     gene            27570..28187
                     /gene="dmsB"
                     /locus_tag="OQQ26_001972"
     CDS             27570..28187
                     /gene="dmsB"
                     /locus_tag="OQQ26_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HCS1857435.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRK
                     KHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            28189..29052
                     /gene="dmsC"
                     /locus_tag="OQQ26_001973"
     CDS             28189..29052
                     /gene="dmsC"
                     /locus_tag="OQQ26_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit
                     DmsC"
                     /protein_id="HCS1857436.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALVLLKGDLRAEAQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
                     LLAMLKNLSPALRTLWLVVTMVLGVVFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF
                     MGGPLLGYLLLSLAGVDGWAMRLLPAISVLPLVVSGVMSVMQGAELATIHSSVQQAAA
                     LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            complement(29088..>29333)
                     /locus_tag="OQQ26_001974"
     CDS             complement(29088..>29333)
                     /locus_tag="OQQ26_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HCS1857437.1"
                     /translation="EEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACE
                     LHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK"
BASE COUNT         7297 a         7245 c         7901 g         6890 t
ORIGIN      
        1 acagccacca aaaacaagcc agaaagtacc aaaacattca gctgctaatt ttctgaacat
       61 atccacctca attaaaaatt gaccctgtga aaaatatggt cgttttatag ggtcgtcgta
      121 aaaaaatgac gacggaaata atgcgcggct attttaaaaa cgaaggcgag tcattcacca
      181 gataaataaa tccagtaaat ttgatttagg gcaacagcgg gttgccccat atagtcattt
      241 gtctgattga cagtgtagtg caagcaaaag atttaatcct ttaggcgtaa taaaaaataa
      301 tttatcatgc taattatttg attttgttgt ttttgcgggc ttatcagcaa gagggagtat
      361 aacgcgatta ttcgctcatt tttcagacat ttgccatgct taaatgtgat gtcatcacgt
      421 attagcaagg cctttcccgt tatactgcca gcgtaaagga taagtcacat atttctggag
      481 gggatatgat tcttgagcgc gttgaaattg tgggttttcg cggtatcaac cgtttgtcgt
      541 tgatgctgga acaaaacaac gtcctgattg gggagaacgc gtggggtaaa tccagcttgc
      601 tggacgcctt aaccctgctg ctatcgccag aatcagatct ctaccatttt gagcgcgacg
      661 atttctggtt cccgccggga gatatcaacg ggcgagaaca tcatctgcat attattttga
      721 ccttccgcga atcgctgcca ggccgacatc gggttcgccg ttatcggccg ctggaagcgt
      781 gctggacgcc atgcaccgat ggctatcacc gtatttttta tcgtctggaa ggggagagtg
      841 cggaagacgg cagcgtgatg acactgcgca gttttctcga taaagacgga catccgattg
      901 atgttgagga tattaacgat caggcacgcc atctggtgcg tttaatgccg gtgctgcgct
      961 tgcgtgatgc ccgttttatg cgccgtattc gtaacggcac ggtgccaaat gttcccaatg
     1021 tggaagtcac cgcgcgccag ctcgatttcc tcgcccgtga gttgtcctca catccgcaaa
     1081 atctctctga tggacagatt cgtcagggac tttccgcaat ggtgcagttg cttgagcatt
     1141 atttctctga gcagggggct ggacaggcgc gatatcgttt aatgcggcgg cgggccagca
     1201 atgagcaacg aagctggcgc tatctggaca tcatcaaccg gatgattgac cgacctggag
     1261 ggcgctcgta tcgggttatt ttgctcggcc tgtttgctac tttattgcag gcaaaaggca
     1321 cattgcaact ggataaagac gcgcgtccgt tattgctaat tgaagatcca gaaacccgcc
     1381 tgcatccgat tatgctttcc gttgcctggc atctgttgaa tcttttgcct ttacagcgta
     1441 ttgctaccac caactctggc gagctgcttt cgttaactcc agtggaacat gtttgccgcc
     1501 tggtgcgtga atcttctcgt gttgccgcct ggcgtctggg gccaagtggc ttgagcaccg
     1561 aagacagccg ccgcatctct tttcacattc gttttaatcg tccgtcatcg ctgtttgctc
     1621 gctgctggtt gctggtggaa ggggaaacgg aaacctgggt tatcaatgaa ctggcgcgtc
     1681 agtgcggaca tcattttgat gccgaaggga tcaaggtcat tgagtttgcc cagtccgggc
     1741 taaagccact ggttaaattt gcccgccgaa tggggattga atggcatgta ctggtcgatg
     1801 gcgatgaagc agggaagaaa tatgccgcta cggtacgcag cctgttgaat aacgatcggg
     1861 aagccgaacg agaacattta acggcgttac cggcgctgga tatggaacat tttatgtatc
     1921 gccagggatt ttccgatgtg ttccaccgcg tggcgcaaat cccggaaaat gtaccgatga
     1981 atctgcgcaa aattatctcg aaagcgatcc atcgctcttc caaacccgat cttgccatag
     2041 aagtggcaat ggaggccgga cgtcgtggtg tggactccgt accgacgctg ctgaaaaaaa
     2101 tgttctcacg cgtgctgtgg ctggcgcgcg gtcgcgcgga ttaaccgcga aacatcgtgg
     2161 ccatttgtgg ctgaatagcg tcgagcatct catagcgccg acggtattca gcccgttttt
     2221 tactggcgat ttcggcaatc tcttttcgtg ctatctgtgc tggaaggcgg taatggcgtt
     2281 cagcatcaca tacgccgcca accgattccc agaaagcgtt gtaatcggca tggatcttgc
     2341 cttctttatc gcgataacgc aggctgcggt aaatatgcgt ttcattgctg acggcaataa
     2401 tctgctctac ctgcaaacgt tgggcaaaca gacaggccgc ttccatcacg aggcgtttgg
     2461 gaaatagccc gtggcaggct ttcgtcgcat tctggatttc ctgatgtgga atttcccatt
     2521 ttgcgccttg cagtccgcca ataaacatcg ttcttttccc ctgatattca cacagggtaa
     2581 acgtgatctc tgccagagga ataccttcgc tgttgcggaa caggattgtg ctgtcacctt
     2641 ctttatccat tgagatcatc atggtcagct caagcgtgaa ctgctcgccg tttttgcctt
     2701 ccagcttcgc cagttgcagc ccgggggtat tcaaatataa gctgaattct tccgccgaca
     2761 tacatccgcg gagtaacgca taatggtaac gtaacgcctc cagcaattgc ttacggctaa
     2821 gattcgccgc aaggtaaggg cgatgcagac gcacaggcag tcgcggctgg cgcgttaaca
     2881 acacattgag attaggccag tgggaaagtt cgttcatcca ctcaacgctt aaacgcggca
     2941 taatcaacga gcgcagcaaa aatttctggc gaaaactacg gcgatgccag aatttacccg
     3001 gccgacactg tccacgtgcc agactaagaa aaagtgacag gctgctgaga gattcagatg
     3061 gcgtaaaagg tccgttcagt tagctgtgac atattcatga aatcaatggt tatacatgac
     3121 gtcgatttca ccattgcgta tcttaaccaa acatcaatag tgtgattact aacgtaaatt
     3181 ttagggtttt gttgatattt cgttgaagtt aatgacccgg attggcatat ggagtattca
     3241 gaatatttat gaaaaagcgg aaaaccgtga agaagcgtta cgttattgcg ctggtgatag
     3301 tcatcgccgg actgattacg ttatggagaa ttcttaacgc acccgtgccg acttatcaga
     3361 cactgattgt gcgccccggt gatttacagc aaagcgtgct ggcgaccgga aagctggacg
     3421 cgctgcgtaa ggttgacgtg ggcgcgcagg tcagcggtca gttgaaaacg ctgtcggtgg
     3481 cgattggcga taaagtaaaa aaagaccagc ttttaggggt cattgatcct gaacaggctg
     3541 aaaaccagat caaggaggtc gaagcaacgc tgatggagct acgcgcgcag cggcagcagg
     3601 cggaagcgga gctgaaactg gcgcgggtga cgtattcccg tcagcaacgt ctggcacaaa
     3661 cgcaggcggt ttcacagcag gatctcgaca ccgccgcgac ggagatggct gtgaaacagg
     3721 cgcaaattgg caccattgac gcgcaaatca agcgcaatca ggcttctctc gatacggcta
     3781 aaaccaatct cgattacact cgcatcgttg ccccgatggc cggggaagtc acgcaaatca
     3841 ccactctgca aggccagacg gtgattgccg cacaacaagc accgaacatt ctgacgctgg
     3901 cagatatgag caccatgctg gtaaaagcgc aggtttctga agcggatgta atccacctga
     3961 aggcggggca aaaagcctgg tttacggtgc ttggcgatcc actgacgcgc tacgaggggc
     4021 aaatcaagga tgtactaccg acgccggaaa aggttaacga cgctattttc tattacgccc
     4081 gttttgaagt ccccaacccc aatggtttgc tgcggctgga tatgactgcg caagtgcata
     4141 ttcagctcac cgatgtgaaa aatgtgctga cgatccctct gtcggcgtta ggcgatccgg
     4201 ttggcgataa tcgttataaa gtcaaattgt tgcgtaatgg tgaaacacgc gagcgtgaag
     4261 tgacgattgg cgcacgtaac gataccgatg ttgagattgt caaagggctg gaagcgggcg
     4321 atgaagtggt gattggtgag gccaaaccag gagctgcgca atgacaccct tgctcgaatt
     4381 aaaggatatt cgtcgcagct atcctgccgg tgatgagcag gttgaggtgc tgaaaggcat
     4441 caccctcgat atttatgtcg gtgagatggt agcgattgtt ggcgcttcgg gttccggtaa
     4501 atcgaccctg atgaatattc tcggctgtct ggataaggcc accagcggca cctatcgcgt
     4561 cgccggtcag gatgttgcca cgctggacgc cgatgcgctg gcgcaactgc gccgcgagca
     4621 tttcggcttt attttccagc gttaccattt gctttcgcat ttaaccgccg agcagaacgt
     4681 tgaagtaccc gccgtctatg ccggtcttga gcggaaacag cggctgcttc gcgcccagga
     4741 gttgctgcaa cggctggggc tggaagaccg tacagagtat tatccggcac agctttcggg
     4801 tggtcagcaa cagcgcgtca gcatcgcgcg ggcattgatg aacggcggtc aggtaattct
     4861 tgccgatgaa ccaaccggcg cactggacag ccattctggc gaagaggtga tggcgatcct
     4921 gcatcagctg cgcgatcgcg ggcatacggt gattatcgtc acccacgatc cgcaggtcgc
     4981 tgctcaggcc gagcgggtga tcgaaattcg cgacggcgaa attgtgcgca atcctcccgc
     5041 cattgaaaaa gtgaatgttg ctggcgggac ggagcctgtt gtcaacacgg tgtctggctg
     5101 gcggcagttt gtcagcggtt ttaacgaggc gctgacgatg gcatggcggg cgctggcagc
     5161 gaataaaatg cgtactttac tgaccatgct ggggattatt atcggtattg cgtcggtggt
     5221 ttccattgtc gtggtgggcg acgccgccaa acaaatggtg ctggcggata ttcgttctat
     5281 tggtacgaat actattgatg tctatcccgg gaaagatttt ggcgatgacg atccgcaata
     5341 tcagcaggcg ctgaagtacg acgacttaat cgccatccaa aaacaaccgt gggtcgcctc
     5401 agccacacct gccgtctcgc aaaacctgtg cctgcgttat aacaatgttg atgttgctgc
     5461 cagtgccaat ggcgtgagcg gcgattattt taatgtctat ggcatgacct tcagtgaagg
     5521 aaacaccttt aatcaggagc agctgaacgg tcgtgcgcag gtcgtggttc tcgacagtaa
     5581 tactcgccgc cagcttttcc cacataaagc agatgtggtt ggcgaggtga ttctggtcgg
     5641 caatatgccc gccagagtca ttggtgtggc ggaagaaaaa cagtcgatgt ttggtagcag
     5701 taaagtgctg cgtgtctggc taccttacag cacgatgtcc gggcgagtta tgggccagtc
     5761 gtggcttaac tccattactg tcagggtgaa agaaggattt gacagcgccg aggcggaaca
     5821 gcaactcacg cgtttacttt cactgcgcca cggaaagaag gatttcttta cctggaacat
     5881 ggacggcgtc ttgaaaactg ttgaaaagac cacacgtact ttacaactgt ttctgacgct
     5941 ggtggcggtg atttcgctgg tggtgggcgg tattggtgta atgaatatta tgctggtgtc
     6001 agtgaccgag cggacgcggg aaattggcat tcgcatggct gtaggtgcgc gagcaagcga
     6061 tgttttacaa cagtttctga tcgaagccgt actggtttgc ctggtcggtg gcgcgttggg
     6121 aataacactg tcactgttaa ttgctttcac cttgcagctt ttcttacccg gctgggagat
     6181 tggtttttca ccgttggcgc tgctgctggc gtttctctgc tcgacggtca ccgggatttt
     6241 atttggctgg ttacccgcac gaaatgcggc acgactggat ccagtagatg ctctggcacg
     6301 agagtaattt ttgagataaa aatgccagcc gatcgggctg gcattttgcc tttaggatgt
     6361 acacaatgag acagaagagc tatgcgactg ccgcttctac ttcgacgggc acaataacac
     6421 tggcgtgatt gccttttggc ccctggtgga catcaaactg aacggattgt ccagctttta
     6481 gcgttctgta accatccatc tgaatggtgg aataatgagc gaaaatatct tcgccgccgc
     6541 cttcagggca gatgaaacca aaccctttgg cattgttgaa ccacttaaca gtaccctttt
     6601 ccatgcttcg acatccttcg caaatcttat acaagtaaga tggaataaac cggggtcaga
     6661 gagggggctg ttcaaaacct cgccaactct agaaatacaa tttagagaat tagggcgagc
     6721 cgtcaagcat ttgacagggg ccagggggca ggtatgaatc aaaaatttga agcagttaac
     6781 gctattgaca ggaatgtgac agatgtcgct gatgccaacg atagatgata gttatctatc
     6841 atgtggagta gattggtcag gcaaataagc tcttgtcagc ggcagggcgt tctgccgata
     6901 accgtaaccg aagatgataa ctgacaatgg gtaaaacgaa cgactggctg gactttgatc
     6961 aactggcgga agaaaaagtt cgcgacgcgc taaaaccgcc atctatgtat aaagtgatat
     7021 tagtcaatga tgattacact ccgatggagt ttgttattga cgtgttacaa aaattctttt
     7081 cttatgatgt agaacgtgca acgcaattga tgctcgctgt tcactaccag gggaaggcca
     7141 tttgcggagt ctttaccgcc gaggttgcag aaaccaaagt ggcgatggtg aacaagtacg
     7201 cgagggagaa tgagcatcca ttgctgtgta cgctagaaaa agcctgaatg caggcataaa
     7261 aattggggga ggtgcctatg ctcaatcaag aactggaact cagtttaaat atggctttcg
     7321 ccagagcgcg cgagcaccgt catgagttta tgaccgtcga gcacttgtta ctggcgctgc
     7381 tcagtaaccc atctgcccgg gaggcgctgg aagcgtgttc tgtggatttg gttgcgctcc
     7441 gtcaggaact ggaagccttt attgaacaaa ccacacccgt tctgcctgcc agtgaagagg
     7501 agcgcgacac acagccgacg ctgagttttc agcgtgtact gcaacgtgcg gtcttccatg
     7561 tccagtcctc cggtcgcaat gaggttaccg gtgcaaacgt tctggtcgct atctttagcg
     7621 aacaggagtc gcaggcggca tatctgttgc gtaaacatga agtcagccgt ctcgatgtgg
     7681 tgaactttat ctctcatggc acgcgtaaag acgagccgac acagtcttct gatcctggca
     7741 gccagccaaa cagcgaagaa caagctggtg gggaggaacg tatggagaat ttcacgacga
     7801 acctgaacca gcttgcgcgt gtgggcggaa tcgacccact gattggtcgt gagaaagagc
     7861 tggagcgtgc tattcaggtt ctctgccgtc gccgtaaaaa caacccgctg ctggtggggg
     7921 aatctggtgt cggtaaaacc gcgattgcag aaggtcttgc ctggcgaatt gttcagggtg
     7981 atgtgccgga agtgatggct gactgtacga tttactctct cgatatcggt tctctgttag
     8041 cgggcacaaa atatcgcggc gactttgaaa aacgttttaa agcgttgctc aagcaactgg
     8101 agcaggacac taacagcatc ctgtttattg atgagatcca caccattatc ggtgcgggtg
     8161 cagcgtctgg tggtcaggtc gatgcggcta acctaatcaa accgttgctc tccagcggta
     8221 aaattcgcgt aattggttcg acaacctatc aggagttcag caacattttc gagaaagacc
     8281 gtgctctggc gcgtcgcttc cagaaaattg atattactga accgtcaatc gaagaaactg
     8341 ttcaaatcat caatggcctg aaaccgaagt atgaagcgca ccacgacgtg cgttataccg
     8401 caaaagcggt gcgtgcggcg gtagagctgg cggtgaaata catcaatgat cgtcatctgc
     8461 cggataaagc gattgatgtt atcgacgaag cgggcgctcg cgcacgcctg atgccggtaa
     8521 gcaaacgcaa gaaaaccgtt aatgtggcgg atattgagtc cgtggtggcc cgtattgcac
     8581 gcattccaga gaagagtgtt tctcagagtg accgcgatac cctgaaaaac ctcggcgatc
     8641 gcctgaaaat gctggtcttc ggtcaggata aagccattga ggcgctgact gaagccatta
     8701 agatggcgcg tgcaggttta ggtcacgaac ataaaccggt cggttcgttc ctgtttgccg
     8761 gtcctaccgg ggtcgggaaa acagaggtga cggtacagct ttcgaaagct ttgggtattg
     8821 agcttctgcg ctttgatatg tccgagtatg tggaacgcca taccgtcagc cgtctgattg
     8881 gtgcgcctcc gggatacgtt ggttttgatc agggaggttt gctgactgat gcggtcatca
     8941 agcatccaca tgcggtgctg ttgctggacg aaatcgagaa agcgcacccg gacgtgttca
     9001 atattctgtt gcaggtgatg gacaacggta cgctgaccga taacaacgga cgcaaagcag
     9061 acttccgtaa cgtggtgctg gtgatgacca ccaacgccgg ggtacgggaa actgagcgca
     9121 aatccattgg tcttatccac caggacaaca gcaccgatgc gatggaagag atcaagaaga
     9181 tctttacacc ggaattccgt aaccgtctcg acaacattat ctggttcgat catctgtcaa
     9241 ctgacgtgat ccatcaggtg gtggataaat tcatcgtcga gttgcaggtt cagctggatc
     9301 agaaaggtgt ttctctggaa gtgagccagg aagcgcgtaa ctggctggcc gagaaaggtt
     9361 acgaccgggc aatgggcgca cgtccgatgg cgcgtgtcat ccaggacaac ctgaaaaaac
     9421 cgcttgccaa cgaactgctg tttggttcgc tggtggacgg cggtcaggtc accgtcgcgc
     9481 tggataaaga gaaaaatgag ctgacttacg gattccagag tgcacaaaag cacaaggcgg
     9541 aagcagcgca ttaatctgat tgtcaggtag gttggtgaag cccgtaatct cgaaagaggt
     9601 tacggacttt ttatttatgg ggtggaggag gttcagaccc tttttttgat gatgatggta
     9661 agttgttgat aattagtgct gcgggaaggt aaggataaaa aagggtggta gcagaaaaat
     9721 gagatggttt tgctttatta acaacgggct aaacgtgtag tatttgagtt cactgccgta
     9781 caggcagctt agaaagtcaa ccgaaagaaa aactcgattt ttataccgtt cactgctgta
     9841 caggtagata aaatgcgaaa aaaaagctcg cactttcgta cgagctcttc tttaaatatg
     9901 gcggtgaggg ggggattcga acccccgata cgctgccgta tacacacttt ccaggcgtgc
     9961 tccttcagcc actcggacac ctcaccaaat tgttttgcta ccaaacctca tgggtggcaa
    10021 cggggcgcta ctatagggag ttggagtaaa acggtcaaga agaattttaa tgataattat
    10081 tgtttgctca tactgtaaac aacttgtgca gtatatctac atcgagacaa gttatggact
    10141 tatacttcca aagtacttca tacatatcac aaaataaaaa ggccggttaa accgaccttt
    10201 tactcgttct ttctcttcgc ccatcaggcg gtaaaacaat cagcgactac ggaagacaat
    10261 gcggcctttg ctcaggtcgt acggggtcag ttcaacagtc actttgtcgc ccgtcaggat
    10321 gcggatgtag tttttgcgca ttttaccgga gatgtgtgca gtaaccacgt gaccgttttc
    10381 taactctacg cggaacatgg tattaggcaa cgtttcaaga acggtacctt gcatttcaat
    10441 attgtcttct ttggccatct aatcctctgg ggtatcacta ccgtaatttg aaccggcaag
    10501 ataatgccga agttctgtaa ataagtaaag atttgcgcgc taaatcgcaa caaacaggtt
    10561 cggcacatta ctccgaaaac acacggctaa gccgcaccaa aagcgcaacg tataagggag
    10621 cggtgagata aacgatgggc gttacctgac gcgaaaaatt ccttatcggc agcggggtaa
    10681 tgagcgtaac caactctgcg accgcaatta taacactctg gggagaaatg tgccgaaaac
    10741 attcattctt gtggtgaaaa caagcaccgt ggtacccaga aattattcgg caatcgtccg
    10801 aggcgcattt gattgagata attaaggtaa tcccggcggg gaatttcgca agcaccaagc
    10861 gacgctgtgt gatcgttaag gacctggcag tcgataagtt taccgccatg accgataaat
    10921 tcctcacaga ataccagaag cgccgtttta gacgcatttt ccatcctgct gaacatggac
    10981 tcgccacaaa atagcgttcc ctgggccacg ccgtacatac cgccgacaag ctcatcttca
    11041 cgccagactt caatagagtg ggcatgaccg agttcgtgaa ggcgatggta ggcttcgacc
    11101 acgccacgcg tgatccaggt tccttcttcg cgatcgctgg cacaaccttc aatgacctga
    11161 ccaaaagcgt aattcatcgt gacacgatag ggcgagcgtt tatgaaatcg cttcatacta
    11221 cggctgatat gcagtgattc aggccaaagc accgcgcgag gatcgggcga ccaccagagg
    11281 atggggtcgc ctggagaaaa ccacggaaaa ataccacgct ggtaagccat taacaggcgc
    11341 gcaggactaa gatcgccccc cagagccagc aggccgttag gctcacgtaa tgcgccttcc
    11401 ggggaaggga aggctattga atggcgagaa agctgaacca ggcgcatgac cgcaaaactc
    11461 cacgcaagtc ggatcgttca ataatagctt acaaaccctg cttaaactgg taataacgcc
    11521 cctgtctggc aagcagttct gcgtgagtac cttgctcaat aatttgcccg ttgtccatca
    11581 ctattatttg ttggaaacga gagagtccgc gaagtcgatg ggtgaccatt aacaccgttt
    11641 tctcatgcat catttctgca agcaattcaa ggatctgact ttcggttgtg gcatctaagc
    11701 cttctgtagg ttcatccagc aacaccagtg gcgcatcatg taacagcgca cgggcgatag
    11761 ccagacggcg cagttcacca ccggagagct ggcgtccgcc ttcacctaac caactgttga
    11821 gacctgcatc ctcgagcagc ttctccagac caacgcgacg caagatctcc gccagagcct
    11881 catcactact gccaggcgag gcgagtaaca gattatcacg cagcgtggcg ctaaacagat
    11941 gcactcgctg aggaacaacg ctgatggtct gtcgtagagc cgcttcattc aggctggcta
    12001 tggggctatc gttaagcaaa atctcgccct gttgcgggtc ccaagcgcgg gtcagcagtt
    12061 gtaacagtgt tgatttgccg catccggttc gcccgagaat cgcaatatgt tccccggcgt
    12121 ttacctgaag agaaatccct ttaagtgcct gttgggattg ctccggataa gtgaactgaa
    12181 catcccgtaa tgtcagcgaa acgcgatcgg caacacgagt ttgggtatca gggaaggtga
    12241 cttccggttt ttgatccgtt aaatcagtga tccgaacggc agaggcaatg acttgcccca
    12301 gatgctgaaa tgcacccgtt actggtgcca gtgcttcaaa cgcggctaac gcgcagaaga
    12361 caaacagggc aattaacgcg ccgggttgag cattgccgcc aacgccgcca gacgccatcc
    12421 acagcatcag gatcaccgct aacgcgccaa tgagcagcat tatcgcttgc gacaatgcgg
    12481 tcagttcaga ttgacggcgt tgcgcttcca gccattgaat ttctgtattc tctagttgcg
    12541 tgcgataacg atcgctggca ccaaaaatgg tcagctcagc ttgcccttgc agccaggccg
    12601 tcagttgttg gcgatactgt ccgcgaagat gagtcagatt ttgcccggtg ctttttcccg
    12661 cacgataaaa cagcggtggc atcaggaaaa gcgtcagtaa cataatgccg cccagcgtaa
    12721 aggcgagggt gaaatcaagg aaacttaacc cgattgtcac caccataatc accacaaaag
    12781 cgcccaccag cggcgagata acgcgcaggt aaagatgatc gagcgtatca acatccgcca
    12841 ccacgcgatt gagcaattcg ccctgacgat agcgcgccag tccggcaggg gagaggggca
    12901 gcaatttgct gaaggtgtaa atgcgcagat gctgcaacac gcggaaagtc gcgtcgtgac
    12961 ttaccagacg ttcaaaataa cgcccggcag tacgggtgat tgctgcgcca cgcacgcccg
    13021 cagcgggtag catatagttg aagttgtaca gtccggcaac ccccgcaacc gctgaggccg
    13081 agaggaacca gccggaaagt gtcaacagac cgatactggc gagcagcgtg acaattgcca
    13141 gcacgatacc aagacttaac atccatttat gacgtttata cagtgccaga tagggtagca
    13201 aagcgcgcat ttaaatctcc tcctgacgat gggccagtaa tgtggcgaat gggccaccag
    13261 ccacacttaa ttccgcgtaa cgtccttgct caataatctg accatcctgc attacccaaa
    13321 tgatatccca gtcagcaaga tcttctaact ggtgggtgac cattaacgtt gtctggcgca
    13381 gagaggcggc attcagcgcc tccattacgc gctgttcact gtgagcatca aggctggcag
    13441 cgggttcatc caatagtaat agcgagcagg gatttagtaa cgcacgggcc accgccacgc
    13501 gctgcgcctg ccccacggaa aggcgggcag cctggtcgcc aacaggcgta tcaacgcctt
    13561 gtggcaggag cggtagaaac tcgctgaccc aggcgttatc cagcgctgct tgtaattcat
    13621 gttcgctggc atcaggtcgc gccagtagta cgttatcccg taatgttgct gccggtaatt
    13681 gtggattttg cccaacccag gagagatgtt tacgccatga ttctggtgat aaatcgcgta
    13741 attctatccc gttgattcgt agcgatccct gatatgagag aaaaccagaa agcgcgttca
    13801 acagtgaact tttacctgaa ccgctgcgac caaccaacac ggcacgttgg cctgctggca
    13861 aagtaaagtt cagcggtccg gccagcgttt taccttccgg cgacgtgata aacagatcct
    13921 cggcctcaat ggtcaccgga tcggtcgatg ctaattccac ctcgccacgc tgcggatggg
    13981 cgagcggggt ttccataaac gttttcagac tgtcagctgc accaacagcc tgggctttag
    14041 catgataaaa cgtaccgaga tcgcgtaatg gctggaaaaa ctctggcgca aggatcaggg
    14101 ccagaaaacc cgcagccagc gtcacgccag tatcgtagtg accaaaatcc agctcgccga
    14161 gataggaaaa accaaagtag accgccacca gagcaattga cagcgaggta aaaaattcga
    14221 gaatgccgga ggataaaaat gccagccgta gcacttccat tgtccgttgg cggaaatctt
    14281 ccgaagcaga acgaatactt tcaatttcag cttcaccacg accaaaaata cgcaatgttt
    14341 ccatgccgcg caggcgatcg aggaaatgcc cacttaagcg agcaagagcg agaaagttac
    14401 gtcggttagc atcggcagcc cccattccaa ccagcgccat aaacaacgga attaacggtg
    14461 cagtgcccag cagaatgagc gccgcagccc agtttgaggg gaagattgcc accacaatca
    14521 gcaacggcac cgacactgcc agcgccattt gcggcagata gcgtgcatag taatcatgca
    14581 tatcgtcaat ttgctcgagt accagcgtcg cccagctccc cgcaggttta ccctgaatcc
    14641 acgctggccc tgcttgttgc agacggtcga gaacctgccg gcggatggca aagcggatat
    14701 gctgcccggc gtgataaccc acccgttcgc gtaaccagac cacccatgcg cgcagtacaa
    14761 aggtcagaac cagtaacgta aagggaagca gcagggcttc acggggaata ttctccataa
    14821 tcatatgttg cagaattcgc gccatgaacc aggcctgggc aatgatcaat atgccgctca
    14881 caaagcccag cagacgagaa atattcagcc aacgttggga gatgacgctt tgctgtttta
    14941 accagcgggt taactctttt tgacgagatt tattcattgc acgcttagca ggtgagttat
    15001 cagaattatt tgcagagcaa tgttacaacg gggaaaaaat aaaggcgacc catagtcgca
    15061 aggtgtcgcc ttctttactt ttgttactga tttgtaaaat tattttgcgt cagctaaacc
    15121 atcgaggtag cgttccgcat caagtgctgc catgcagcct gtaccggccg aagtaatggc
    15181 ctggcgataa atgtgatcca tcacgtcgcc tgcggcaaag acgccaggaa tgctggtctg
    15241 ggtggcatta ccatgaatac ccgactgtac tttgatgtag ccgttttcca gttccagctg
    15301 cccttcgaaa atcgcagtat tcgggctgtg accgatagca acaaacagac cggcaacgtc
    15361 gagtgactcg atgttatcgc tgttttgcgt atcgcgcaga cgaatgccag tgacacccat
    15421 ttgatcgcca gtcacttctt ccagcgtacg gttggtgtgc agaatgatgt tgccgttctc
    15481 cactttatcc atcagacgct taataaggat tttttccgcg cggaaaccgt cacggcggtg
    15541 aatcagatgc acttccgaag cgatgttaga cagatacagc gcctcttcaa ccgcggtatt
    15601 gccgccgccg atgaccgcaa ctttctggtt gcgatagaag aaaccgtcgc aggttgcaca
    15661 agcagaaacc ccacggcctt taaaggcttc ttcagagggc aggccgagat agcgtgcaga
    15721 agctccggtg gcaataatca gcgcgtcgca agtgtattcg ccgttatcgc cattcagacg
    15781 gaacggacgg ttttgcagat ccaccttgtt gatatgatca aaaatgatct cagtttcaaa
    15841 cttggtggca tgttcgtgca tgcgctccat taataacgga ccggtcagat cgtttggatc
    15901 gccaggccag ttttccactt ccgtggtggt ggtcagttgg ccgccttttt ccatgccggt
    15961 aatcagcaca ggttgcaggt tggcgcgcgc cgcgtagaca gcagcggtgt atcccgccgg
    16021 gcctgaaccc aggataagca gtttactgtg tttggtcgtg cccatgagat ccccatagtt
    16081 gttggcagac aatgggcagg attgtaggga atttacagac gtaaaaaaag agtatgacga
    16141 ttttgttaac aatttgtgca atcggcagca tcgataagca ggtcaaattc tcccgtcatt
    16201 atcacctctg ctacttaaat ttcccgcttt ataagccgat taaatgatga ataaacgccc
    16261 ctgttaatga atatctggca tgttgtacta aaaatcgatg ttttgctttg acaatcccct
    16321 ggtgttttgc gaaaacattc gaggaagaaa aaaacagtat tcttatatgc gcataaccat
    16381 gcatgtaaat accatgttta ccgtgctagt gaaatctacg tatggcgtgg acagacgcca
    16441 ttcgtgatgt cgatagctgc cacaaggcaa cggtcttctc accgtagacc caggcattgc
    16501 gcgccatgaa tcttcatgat ttcggtctat cgtgacgggc agcgactctg aacagtgatg
    16561 tttcagggtc agacaggagt agggaaggaa tacagagaga caataataat ggtagatagc
    16621 aagaagcgcc ctggcaaaga tctcgaccgt atcgatcgta acattcttaa tgagttgcaa
    16681 aaggatgggc gtatttctaa cgtcgagctt tctaaacgtg tgggactttc cccaacgccg
    16741 tgccttgagc gtgtgcgtcg gctggaaaga caagggttta ttcagggcta tacggcgctg
    16801 cttaaccccc attatctgga tgcatcactt ctggtattcg ttgagattac tctgaatcgt
    16861 ggcgcaccgg atgtgtttga acaattcaat accgctgtac aaaaacttga agaaattcag
    16921 gagtgtcatt tagtatctgg tgatttcgac tacctgttga aaacacgcgt gccggatatg
    16981 tcagcttacc gtaagttgct gggggaaacc ctgttacgtc tgcctggcgt caatgacaca
    17041 cggacatacg ttgttatgga agaagtcaag cagagtaatc gtctggttat taagacgcgc
    17101 taacacggaa caggtgcaaa atcggcgtat tttgattaca ctcctgttaa tccatacagc
    17161 aacagtactg gggtaacctg gtactgttgt ccgttttagc atcgggcagg aaaagcctgt
    17221 aacctggaga gcctttcttg agccaggaat acactgaaga caaagaagtc acattgacaa
    17281 agttaagtag cggccgccgc cttctggagg cgttgctgat ccttattgtc ctgtttgccg
    17341 tctggttgat ggctgcctta ctaagtttta acccttcgga tcccagctgg tcgcaaacgg
    17401 cctggcatga acctatccat aatttaggtg ggatgcccgg tgcgtggctg gcagatacgc
    17461 tgttctttat ttttggcgtg atggcttaca ccattcccgt cattattgtc ggcggttgtt
    17521 ggtttgcctg gcgtcatcag tccagcgacg aatacattga ttattttgcc gtttcgctac
    17581 gcatcattgg cgttttggcg ctcatcctta cctcctgtgg tctggcggca atcaacgctg
    17641 acgatatctg gtattttgcc tccggtggcg tcattggcag cttactaagt actacgctac
    17701 aaccactgtt acacagtagc gggggaacta ttgcgctgct ctgcgtttgg gcagcgggcc
    17761 tgacgctgtt caccggttgg tcatgggtga ccattgctga aaaaatcggc ggctggattt
    17821 taaacattct caccttcgcc agtaatcgta cccgtcgcga tgatacctgg gtcgatgaag
    17881 atgagtatga agacgacgaa gagtatgaag atgaaaatca cggcaaacag catgaatcac
    17941 gccgtgcccg tattcttcgt ggcgcgctag cgcgtcgtaa acggttggcg gaaaaattca
    18001 ttaatccgat ggggcggcaa acagacgctg cgttgttctc cggtaagcgg atggatgatg
    18061 acgaagagat tacctacact gcacgcggtg tggctgccga cccggacgac gtcctatttt
    18121 cgggcaatcg tgcaacgcag ccagaatatg acgaatacga tccattatta aacggtgcgc
    18181 caattaccga acctgtcgct gtagcagctg ctgctaccac ggcgacacaa agctgggctg
    18241 cgccggttga acctgtgact cagacgccgc ctgttgcctc tgttgatgtt ccaccttcgc
    18301 aacctacagt agcctggcag cctgtaccgg gtccacaaac gggagagccg gttattgctc
    18361 ctgcaccgga aggttaccca cagcagccac aatatgcgca gcctgcagtg caatataatg
    18421 agccgctgca acaaccagta cagccacagc agccgtatta tgcacctgca gctgaacaac
    18481 ctgcgcaaca accttactac gctcctgcgg cggaacaacc tgttcagcaa ccgtattatg
    18541 cccctgcgcc agaacaaccg gtggcaggta acgcctggca agccgaagag cagcaatcca
    18601 cttttgctcc acagtctaca taccagactg agcaaactta tcagcagcca gccgctcagg
    18661 agccgttgta ccaacagccg caacctgttg aacagcagcc tgttgtggag cctgaacccg
    18721 ttgtagaaga gacaaaaccc gcgcgtccgc cgctttacta ctttgaagaa gtggaagaga
    18781 agcgagcccg tgaacgtgaa caacttgcgg cctggtatca accgattcca gaaccggtta
    18841 aagaaccaga accggtcaaa tcttcgctga aagcaccttc tgttgcagca gtacctccag
    18901 tagaaaccgc tgccgctgtt tctccgctgg catctggcgt gaaaaaagcg acactggcga
    18961 cgggggctgc cgcaaccgtt gccgcgccag tcttcagtct ggcaaatagc ggtggaccgc
    19021 gtccgcaggt caaagagggg attggcccgc agttgccacg accgaaacgt atccgcgtgc
    19081 caactcgccg tgaactggcg tcttacggta ttaagctgcc ctcacagcgt gcggcggaag
    19141 agaaagcccg tgaagcccag cgcaatcagt atgattctgg cgatcagtat aacgatgatg
    19201 aaatcgatgc gatgcagcag gatgaactgg cacgtcagtt cgcccagaca cagcagcaac
    19261 gctatggcga acagtatcaa catgatgtgc ccgtaaacgc agaagatgca gatgctgcgg
    19321 cagaggctga actggctcgt cagtttgcgc aaactcaaca acaacgttat tccggcgaac
    19381 aaccggctgg ggcgaatccg ttctcgctgg atgattttga attttcgcca atgaaagcgt
    19441 tgctggatga tggtccacac gaaccgttgt ttacgccaat tgttgaacct gtacagcagc
    19501 cgcaacaacc ggttacgccg cagccgcagt atcagcagcc acaacagcag gttgcgccgc
    19561 agccacaata tcagcagccg cagcaaccgg ttgcgccaca gcagcaatat cagcagccgc
    19621 aacaaccagt tgcgccgcag ccgcagtatc aacagccgca acaaccggtt gcaccgcagc
    19681 cgcagtatca gcagccgcaa caaccggtta cgccgcagcc gcaacaacca gttgcgccgc
    19741 agccgcagta tcaacagccg caacaaccgg ttgcaccgca gccgcagtat cagcagccac
    19801 aacagccagt tgcgccacag ccgcaggata ccctgcttca tccgctgttg atgcgtaatg
    19861 gcgacagccg tccgttgcat aaaccgacga cgccgctgcc ttctctggat ttgctgacac
    19921 cgccgccgag cgaagtggag ccggtagata cctttgcgct tgaacaaatg gctcgtctgg
    19981 tggaagcgcg tctggctgat ttccgtatta aagccgatgt cgtcaattac tctccgggac
    20041 cggttatcac tcgctttgaa cttaacctgg ctcctggcgt aaaagcggcg cgcatttcta
    20101 acttgtcacg ggaccttgcc cgttcacttt cgacggtggc ggtgcgtgtc gttgaagtta
    20161 ttcctggcaa accctatgta ggtctggagt taccaaataa aaaacgacaa accgtttatc
    20221 tgcgcgaagt tttggataac gccaaattcc gcgataatcc gtcgccatta accgtggtgc
    20281 tgggtaaaga tatcgccggt gagccggtgg ttgccgatct ggcgaaaatg ccgcacttgt
    20341 tggttgcggg gactaccggt tccggtaaat ctgtcggtgt gaacgcgatg atcctgagca
    20401 tgctttataa agcacagcca gaagatgtgc gtttcatcat gatcgacccg aaaatgctgg
    20461 agctttcggt ttatgaaggc attccgcatc tgttaacgga agtcgttact gatatgaaag
    20521 atgccgccaa cgcgctgcgc tggtgtgtta acgagatgga gcgtcgttat aaactgatgt
    20581 ctgcgctggg tgtgcgtaat ctggtgggtt ataacgaaaa aattgctgaa gccgatcgca
    20641 tgatgcgtcc gattccagac ccgtactgga agccgggtga cagtatggat gcccagcatc
    20701 cggtgctgaa aaaagaacca tacattgtgg tgttggttga cgaatttgcc gacctgatga
    20761 tgacggtagg taaaaaagtg gaagagctga tagcacgtct ggcgcaaaaa gcccgtgccg
    20821 cgggtatcca cctcgtactg gcaactcagc gtccatcggt tgatgttatt actggtctga
    20881 ttaaagcgaa tattccgacc cgtatcgcct ttaccgtatc cagtaagatt gactcacgta
    20941 ccattcttga tcaggctggc gcggaatcac tgctgggtat gggggatatg ctctactctg
    21001 ggccgaactc cacgttgccg gtacgtgtcc atggtgcttt tgttcgcgat caggaagttc
    21061 atgccgtggt gcaggactgg aaagcgcgtg gtcgcccaca gtatgttgat ggcatcacct
    21121 ccgacagcga aagcgaaggt ggcgcgggcg gtttcgatgg cgctgaagaa ctggatccgt
    21181 tgttcgatca ggcggtgcag tttgtcactg aaaaacgcaa agcgtcaatt tctggcgtac
    21241 agcgtcagtt ccgcattggt tataaccgtg cagcgcgtat tatcgaacag atggaagcgc
    21301 aggggattgt gagcgaacag gggcataacg gtaatcgtga agtgctggcc ccactgccgt
    21361 ttgactaatt aatgcatcgt atgccggata aggcgcggta gcgtcgcatc cggcactctg
    21421 gtaactgaaa attcagtatt ttcttctttc ctcaagctga ttattagcct ggaatagaga
    21481 gtagagggaa ctcctgatcg ggagtgacgt aatttgagga ataatgatga aaaaaattgc
    21541 catcacctgt gcattactct caagcttagt agcaagcagc gtttgggctg atgccgcaag
    21601 cgatctgaaa agccgcctgg ataaagtcag cagcttccac gccagcttca cacaaaaagt
    21661 gactgacggt agcggcgcgg cggtgcagga aggtcagggc gatctgtggg tgaaacgtcc
    21721 aaatttattt aactggcata tgactcaacc tgatgaaagc attctggttt ctgacggtaa
    21781 aacactgtgg ttctataacc cgttcgttga gcaagctacg gcaacctggc tgaaagatgc
    21841 caccggtaat acgccgttta tgctgattgc ccgcaaccag tccagcgact ggcagcagta
    21901 caatatcaaa cagaatggcg atgactttgt cctgacgccg aaagccagca atggcaatct
    21961 gaagcagttc accattaacg tgggatgtga tggcacaatc catcagttta gcgcggtgga
    22021 gcaggacgat cagcgcagca gttatcagct gaaatcccag caaaatgggg ctgtggatgc
    22081 agcgaaattt accttcaccc cgccgcaagg cgtcacggta gatgatcaac gtaagtagag
    22141 gcacctgagt gagcaatctg tcgctcgatt tttcggataa tacttttcaa cctctggccg
    22201 cgcgtatgcg gccagaaaat ttagcacagt atatcggcca gcaacatttg ctggctgcgg
    22261 ggaagccgct gccgcgcgct atcgaagccg ggcatttgca ttcgatgatc ctctgggggc
    22321 caccgggtac cggcaaaaca accctcgctg aagtgattgc ccgctatgcg aacgctgatg
    22381 tggaacgtat ttctgccgtc acctctggcg tgaaagagat tcgcgaggcg atcgagcgtg
    22441 cccggcaaaa ccgcaatgca ggtcgccgca ctattctttt tgttgacgaa gttcaccgtt
    22501 tcaacaaaag ccagcaggat gcatttctgc cacatattga agacggcacc atcactttta
    22561 ttggcgcaac cactgaaaac ccgtcgtttg agcttaattc ggcactgctt tcccgtgccc
    22621 gtgtctatct gttgaaatcc ctgagtacag aggatattga gcaagtacta actcaggcga
    22681 tggaagacaa aacccgtggc tatggtggtc aggatattgt tctgccagat gaaacacgac
    22741 gcgccattgc tgaactggtg aatggcgacg cgcgccgggc gttaaatacg ctggaaatga
    22801 tggcggatat ggccgaagtc aatgatagcg gtaagcgggt cctgaagcct gaattattga
    22861 ccgaaatcgc cggtgagcga agcgcccgct ttgataacaa aggcgatcgc ttttacgatc
    22921 tcatttccgc actgcataag tcggtacgtg gtagcgcacc cgatgcggcg ctgtactggt
    22981 atgcgcgaat tattaccgcc ggtggcgatc cgttatatgt cgcgcgtcgc tgtctggcga
    23041 tagcgtctga agatgtgggt aatgctgatc cacgagcgat gcaggtggca attgcggctt
    23101 gggattgctt tactcgcgtt ggcccggcgg aaggtgaacg cgccattgct caggcgattg
    23161 tttacctggc ctgcgcgcca aaaagcaacg ctgtctacac tgcgtttaaa gccgcgctgg
    23221 cggatgctcg cgaacgtccg gattatgacg tgccggttca tttgcgtaat gcgccgacga
    23281 aattaatgaa ggaaatgggc tacgggcagg aatatcgtta cgctcatgat gaagcaaacg
    23341 cttatgctgc cggtgaggtt tacttcccgc cggaaatagc acaaacacgc tattatttcc
    23401 cgacaaacag gggccttgaa ggcaagattg gcgaaaagct cgcctggctg gctgaacagg
    23461 atcaaaatag ccccataaaa cgctaccgtt aatgttatcg ttgcggtaat gttgttactg
    23521 tatccctgtg gtcgcaggct gtggccacat ctcccattta attcgataag cacaggataa
    23581 gcatgctcga tcccaatctg ctgcgtaatg agccagacgc agtcgctgaa aaactggcac
    23641 gccggggctt taagctggat gtagataagc tgggcgctct tgaagagcgt cgtaaagtat
    23701 tgcaggtcaa aacggaaaac ctgcaagcgg agcgtaactc ccgatcgaaa tccattggcc
    23761 aggcgaaagc gcgcggggaa gatatcgagc ctttacgtct ggaagtgaac aaactgggcg
    23821 aagagctgga tgcagcaaaa gccgagctgg atgctttaca ggctgaaatt cgcgatatcg
    23881 cgctaaccat ccctaacttg cctgcagatg aagtgccggt aggtaaagac gaaaatgaca
    23941 acgttgaagt cagccgctgg ggcaccccgc gtgagtttga ctttgaagtt cgtgaccacg
    24001 tgacgctggg tgaaatgcac tctggcctcg actttgcagc cgcagttaag ctgacaggtt
    24061 cgcgctttgt ggtgatgaaa gggcagattg ctcgcatgca ccgcgcactg tcgcagttta
    24121 tgctggatct gcataccgaa cagcatggct acagtgagaa ctatgttccg tacctggtta
    24181 accaggacac gctgtacggt acgggtcagc tgccgaaatt tgctggcgat ctgttccata
    24241 ctcgtccgct ggaagaagaa gcagacacca gtaactatgc gctgatccca acggcagaag
    24301 ttccgctgac caacttggta cgcggtgaaa tcatcgatga agatgatctg ccaattaaga
    24361 tgaccgccca caccccatgc ttccgttctg aagcaggttc atatggtcgt gacacccgtg
    24421 gtctgatccg tatgcaccag ttcgacaaag ttgaaatggt gcagatcgtg cgcccggaag
    24481 actcaatggc ggcgctggaa gagatgactg gtcatgcaga aaaagtcctg cagttgctgg
    24541 gcctgccgta ccgtaaaatc atcctttgca ctggcgacat gggctttggc gcttgcaaaa
    24601 cttacgacct ggaagtatgg atcccggcac agaacaccta ccgtgagatc tcttcctgct
    24661 ccaacgtttg ggatttccag gcacgtcgta tgcaggcacg ttgccgcagc aagccggaca
    24721 agaaaacccg tctggttcat accctgaacg gttctggtct ggctgttggt cgtacgctgg
    24781 ttgcagtaat ggaaaactat cagcaggctg atggtcgtat tgaagtacca gaagttctgc
    24841 gtccgtatat gaacggactg gaatatattg gctaataccc aatttttctg aatctaaaaa
    24901 gcgcctgcgg gcgctttttt tgtctccctt tgataccgaa caataattac tcctcactta
    24961 cacgtaatac tactttcgag tgaaaatcta cctatctctt tgattttcaa attatttgat
    25021 gtatacaagc ctatatagcg aactgctata gaaataatta cacaatacgg tttgttactg
    25081 gaatcaatcg tgagcaagct tgagtgagcc attatgaaaa cgaaaatccc tgatgcggta
    25141 ttggctgctg aggtgagtcg ccgtggtttg gtaaaaacga cagcgatcgg cggcctggca
    25201 atggccagca gcgcattaac attacctttt agtcggattg cgcacgctgt cgatagcgcc
    25261 attccaacaa aatcagacga aaaggttatc tggagcgcct gtacagttaa ctgtggtagt
    25321 cgctgcccgc tacgtatgca cgtcgtggac ggtgaaatca aatatgtcga aacggacaat
    25381 accggcgatg acaattacga cggcctgcac caggttcgcg cctgcctgcg tgggcgttcc
    25441 atgcgtcgcc gtgtctacaa tccggaccgc ctgaaatatc cgatgaaacg agtcggggcg
    25501 cgcggtgaag gcaaattcga gcgcattagc tgggaagaag cctacgacat catcgcgacc
    25561 aatatgcagc gcctgatcaa agagtacggc aacgaatcca tctatctgaa ctatggcacc
    25621 ggtacgctgg gtggcaccat gacccgctcc tggccgccgg gaaataccct ggtcgcgcgc
    25681 ctgatgaact gctgcggcgg ttatctgaac cattacggtg actactcttc cgcgcaaatt
    25741 gcggaaggtc tgaactatac ctacggtggc tgggcagatg gcaacagccc gtcggatatc
    25801 gaaaacagta agctggtagt gctgtttggt aataacccag gcgaaacgcg aatgagtggc
    25861 ggcggggtga cttactatct tgaacaggca cgccagaaat ctaatgctcg catgatcatc
    25921 atcgatccgc gctataccga caccggtgcc gggcgcgaag atgagtggat ccctattcgt
    25981 ccaggaacag atgccgcact ggttaacggt ctggcgtacg tcatgatcac tgaaaacctg
    26041 gtggatcagg cattcctcga taaatattgc gttggctatg acgagaaaac cctgcccgcc
    26101 agtgcgccga aaaatggtca ctataaagct tatattctgg gtgaagggcc agatggcgtg
    26161 gctaaaacac cggaatgggc ctcgcaaatc accggtgttc cggcagacaa aattatcaaa
    26221 ctggctcgtg aaatcggcag taccaaaccg gcgtttatca gctagggatg gggcccgcag
    26281 cgtcacgcta acggtgaaat cgcaacccgt gctatctcga tgctggcgat tctgaccggt
    26341 aacgttggta ttaatggagg gaacagcggc gcgcgtgaag gttcatacag cttaccgttt
    26401 gtccgtatgc caaccctgga aaacccgatc cagaccagca tttctatgtt tatgtggacc
    26461 gatgccattg aacgtggccc ggaaatgacg gcgctgcgtg atggtgtgcg cgggaaagat
    26521 aagctggatg tgccagatca aaatgatctg gaactatgcc ggtaactgcc tgattaacca
    26581 gcattctgaa atcaaccgta cccatgaaat ccttcaggat gataagaagt gcgagctgat
    26641 tgtggttatc gactgccaca tgacctcatc ggcgaaatat gctgacatcc tgctgcctga
    26701 ctgcaccgct tccgaacaga tggactttgc actggatgca tcctgcggga atatgtctta
    26761 cgtgattttc aacgatcagg tgattaaacc gcgctttgaa tgtaagacca tctatgaaat
    26821 gaccagcgaa ctggcaaaac gtcttggcgt tgagcaacag tttactgaag gccgtaccca
    26881 agaagagtgg atgcggcatc tgtatgccga gtcgcgggaa gcgattcctg aactgccaac
    26941 gtttgaagag ttccgcaagc aggggatctt taaaaagcgc gacccacaag ggcatcacgt
    27001 tgcttataaa gccttccgtg aagatccgca ggcaaaccca ctgactacgc catcgggcaa
    27061 aattgagatt tattcgcagg cgctggctga cattgccgct acctgggaat tgccagaagg
    27121 cgacgtgatc gatccactgc cgatctacac gccgggcttt gaaagttatc aggatccgct
    27181 gaacaaacag tatccgctgc agcttacggg tttccactat aaatctcgcg ttcactcaac
    27241 ttacggcaac gttgatgtgc tgaaagcggc ttgccgtcag gaaatgtgga tcaacccgct
    27301 tgatgcgcaa aaacgcggta tccacaacgg cgataaagtc aggatcttta acgatcgtgg
    27361 tgaagttcat attgaggcga aagtgacgcc acgaatgatg ccgggcgtgg tcgcattggg
    27421 tgaaggcgcc tggtatgacc cggatgcaaa acgtgtcgat aagggcggtt gtatcaacgt
    27481 actgaccact caacgtccgt ctcctctcgc taaggggaat ccgtcacata caaaccttgt
    27541 tcaggttgaa aaggtgtaag gagtaaccga tgacaaccca gtatggattt tttattgatt
    27601 ccagccgttg caccggttgc aaaacctgcg agctggcttg taaagactac aaagatttga
    27661 cgccagaagt cagtttccgc cgcatttatg aatatgctgg cggcgactgg caggaagata
    27721 acggtgtctg gcaccagaac gtgtttgcct actatctgtc gatttcatgt aaccactgcg
    27781 aagatccggc ttgtactaaa gtctgcccga gcggtgcgat gcataaacgt gaagatggtt
    27841 ttgttgtggt cgatgaagat gtgtgcattg gctgccgcta ctgccatatg gcttgcccgt
    27901 atggcgcacc gcaatataac gaaacgaaag gccatatgac caaatgcgat ggttgttatg
    27961 accgtgttgc ggagggtaaa aagccgatct gtgttgaatc ttgtccgctg cgggcgctgg
    28021 atttcggccc tatcgacgag ctgcgtaaaa aacatggcga tctggcggcc gttgcgccgt
    28081 tgccgcgagc tcactttacc aaaccgaata ttgtgatcaa acccaatgcc aatagccgcc
    28141 cgaccgggga taccactggc tatctggcaa acccgaagga ggtgtgagat gggaagtgga
    28201 tggcatgaat ggccgctgat gatcttcacg gtcttcgggc aatgtgtggc gggtggtttt
    28261 atcgttctgg ctttggtgct gctcaaaggc gacctgcgag cagaagccca gcagcgtgtt
    28321 atcgcctgca tgtttggctt atgggtgctg atgggcattg gctttatcgc ctctatgctc
    28381 catcttggtt caccgatgcg cgcctttaac tcgctcaacc gggtaggggc ttcagcactc
    28441 agtaacgaaa tcgccagcgg ttcgatcttt tttgctgtag gcggcatcgg ctggttgctg
    28501 gcaatgctga aaaatctgtc accggcattg cgtacgctgt ggctggtggt gacgatggtt
    28561 cttggcgtcg tctttgtctg gatgatggtg cgtgtgtata acagcattga taccgttccg
    28621 acctggtaca gcatctggac gccgatgggc ttcttcctga cgatgtttat gggcggcccg
    28681 ttactgggtt acctgttgct gagtctggct ggcgtcgatg gctgggcgat gcgtctgctg
    28741 ccagccattt ctgtactgcc actggtggtg agtggcgtga tgtcagtgat gcagggcgca
    28801 gagctggcga ctattcatag ttctgtgcag caggccgcag cgctggtgcc ggactatggt
    28861 gcgctgatgt cctggcggat cgtgcttttg gccgttgccc tgtgcttgtg gattgcacca
    28921 cagctaaaag gttatcagcc tgcggttccg ctactatccg tctcattcat tctgcttctg
    28981 gcaggggaat taatcggtcg cggcgtattc tatggtttgc atatgaccgt ggggatggcc
    29041 gtcgcaagct aatcagtaac aaccgggggt tcggccccgg ttctctttta tttctgcttc
    29101 gttaacgtgt cataactggt catcaaatta cgataatcag gaatatggtt agagaacaac
    29161 gtcgccagtc cttcaatatc attacgccag tcacggtgca gctcgcaagc cacgccgaac
    29221 catgtcatca attgcgcacc tgcttgcgac atgcgatccc atgccgaatg ccgggtaatt
    29281 tcattaaagg tccctgacgc gtcagtcaca acaaagacat caaacccttc ttc
//
LOCUS       DAJVTL010000048        29171 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.048, whole genome shotgun sequence.
ACCESSION   DAJVTL010000048 DAJVTL010000000
VERSION     DAJVTL010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29171
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.048"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(114..1004)
                     /gene="cyoE"
                     /locus_tag="OQQ26_001975"
     CDS             complement(114..1004)
                     /gene="cyoE"
                     /locus_tag="OQQ26_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HCS1857438.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPTVSLVYATLLGFAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
                     ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS
                     VMMSVDFMVPDSHTLLAAVW"
     gene            complement(1016..1345)
                     /locus_tag="OQQ26_001976"
     CDS             complement(1016..1345)
                     /locus_tag="OQQ26_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HCS1857439.1"
                     /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
                     VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL
                     NYNMMMH"
     gene            complement(1345..1959)
                     /locus_tag="OQQ26_001977"
     CDS             complement(1345..1959)
                     /locus_tag="OQQ26_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HCS1857440.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
                     ALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
     gene            complement(1949..3940)
                     /gene="cyoB"
                     /locus_tag="OQQ26_001978"
     CDS             complement(1949..3940)
                     /gene="cyoB"
                     /locus_tag="OQQ26_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HCS1857441.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
                     GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG
                     ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT
                     WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN"
     gene            complement(3962..4855)
                     /gene="cyoA"
                     /locus_tag="OQQ26_001979"
     CDS             complement(3962..4855)
                     /gene="cyoA"
                     /locus_tag="OQQ26_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001545411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HCS1857442.1"
                     /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATPDRAAFDQWVAKAKQSPNSMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD
                     VINKFMAHGKSMDMSHAESAH"
     gene            complement(5316..6791)
                     /gene="ampG"
                     /locus_tag="OQQ26_001980"
     CDS             complement(5316..6791)
                     /gene="ampG"
                     /locus_tag="OQQ26_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HCS1857443.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
                     SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
                     VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
                     LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
     gene            complement(6835..7413)
                     /locus_tag="OQQ26_001981"
     CDS             complement(6835..7413)
                     /locus_tag="OQQ26_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1857444.1"
                     /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT
                     VSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVN
                     LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNK
                     NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR"
     gene            7718..8035
                     /gene="bolA"
                     /locus_tag="OQQ26_001982"
     CDS             7718..8035
                     /gene="bolA"
                     /locus_tag="OQQ26_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HCS1857445.1"
                     /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG
                     SIA"
     gene            8379..9677
                     /gene="tig"
                     /locus_tag="OQQ26_001983"
     CDS             8379..9677
                     /gene="tig"
                     /locus_tag="OQQ26_001983"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HCS1857446.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
                     FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEA
                     EDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
                     ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
     gene            9923..10546
                     /gene="clpP"
                     /locus_tag="OQQ26_001984"
     CDS             9923..10546
                     /gene="clpP"
                     /locus_tag="OQQ26_001984"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006809880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HCS1857447.1"
                     /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            10672..11946
                     /gene="clpX"
                     /locus_tag="OQQ26_001985"
     CDS             10672..11946
                     /gene="clpX"
                     /locus_tag="OQQ26_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HCS1857448.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
                     KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
     gene            12134..14488
                     /gene="lon"
                     /locus_tag="OQQ26_001986"
     CDS             12134..14488
                     /gene="lon"
                     /locus_tag="OQQ26_001986"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HCS1857449.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATRRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            14697..14969
                     /gene="hupB"
                     /locus_tag="OQQ26_001987"
     CDS             14697..14969
                     /gene="hupB"
                     /locus_tag="OQQ26_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HCS1857450.1"
                     /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            15161..17032
                     /gene="ppiD"
                     /locus_tag="OQQ26_001988"
     CDS             15161..17032
                     /gene="ppiD"
                     /locus_tag="OQQ26_001988"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HCS1857451.1"
                     /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
                     VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
                     QYARELKLGISDEQVKQAIFAIPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
                     EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
                     KTEDEAKAVLDGLNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
                     KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
                     DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG
                     INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
                     DLKAGKGAEAMQVAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPNYGMATDMQGN
                     VVLLVLDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            17183..17554
                     /locus_tag="OQQ26_001989"
     CDS             17183..17554
                     /locus_tag="OQQ26_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HCS1857452.1"
                     /translation="MKHGIKALLITLSLACAGMSHSALAAAPAAKPTTVETKAEAPAA
                     QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED
                     LKQVPGMGNSLVERNLAVLTL"
     gene            17660..18058
                     /gene="fadM"
                     /locus_tag="OQQ26_001990"
     CDS             17660..18058
                     /gene="fadM"
                     /locus_tag="OQQ26_001990"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain acyl-CoA thioesterase FadM"
                     /protein_id="HCS1857453.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFHWM
                     TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA
                     LITFVCIDLKTQKALALEGELREKLEQMVK"
     gene            complement(18110..18805)
                     /gene="queC"
                     /locus_tag="OQQ26_001991"
     CDS             complement(18110..18805)
                     /gene="queC"
                     /locus_tag="OQQ26_001991"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HCS1857454.1"
                     /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHCAEID
                     VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
                     MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKP
                     TVMAAMKQKTGLK"
     gene            complement(18870..20570)
                     /locus_tag="OQQ26_001992"
     CDS             complement(18870..20570)
                     /locus_tag="OQQ26_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HCS1857455.1"
                     /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL
                     RQAQEAGWLEWQAQSGRGKRGQLRFQVTPESLRNAMMEQALETGKQQDVLELAQLAPG
                     ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
                     NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ
                     LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTA
                     ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV
                     SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT
                     IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTP
                     QLAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQIMPDEE
                     NRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ
                     "
     gene            20670..21488
                     /gene="cof"
                     /locus_tag="OQQ26_001993"
     CDS             20670..21488
                     /gene="cof"
                     /locus_tag="OQQ26_001993"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HCS1857456.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR
                     HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM
                     HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI
                     QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE
                     MLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE"
     gene            21641..22099
                     /gene="decR"
                     /locus_tag="OQQ26_001994"
                     /pseudo
     CDS             21641..22099
                     /gene="decR"
                     /locus_tag="OQQ26_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308528.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DecR"
     gene            22129..23901
                     /locus_tag="OQQ26_001995"
     CDS             22129..23901
                     /locus_tag="OQQ26_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HCS1857457.1"
                     /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD
                     GVTEQHFTTGQILMWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSR
                     QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL
                     TLFALLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
                     QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ
                     LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE
                     LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD
                     IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS
                     VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE
                     HQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDELAQQSGWYRD
                     MYRYQQLEAALDDAPEIREEAVDA"
     gene            23894..25675
                     /locus_tag="OQQ26_001996"
     CDS             23894..25675
                     /locus_tag="OQQ26_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HCS1857458.1"
                     /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL
                     LISYFIDNMVAKNNLPLKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT
                     DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM
                     FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
                     QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS
                     GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDY
                     PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP
                     LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL
                     ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID
                     SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG
                     RYWQMYQLQLAGEELAASVREEESLSA"
     gene            25856..26194
                     /gene="glnK"
                     /locus_tag="OQQ26_001997"
     CDS             25856..26194
                     /gene="glnK"
                     /locus_tag="OQQ26_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HCS1857459.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
                     RTGEADEAAL"
     gene            26224..27438
                     /locus_tag="OQQ26_001998"
     CDS             26224..27438
                     /locus_tag="OQQ26_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HCS1857460.1"
                     /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
                     MTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINW
                     LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGTLAERIRFSAVLIFVVVWLTL
                     SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
                     KPSLLGACSGAIAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASS
                     LGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGL
                     DVNSHGENAYNA"
     gene            complement(27487..28347)
                     /gene="tesB"
                     /locus_tag="OQQ26_001999"
     CDS             complement(27487..28347)
                     /gene="tesB"
                     /locus_tag="OQQ26_001999"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HCS1857461.1"
                     /translation="MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
                     RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
                     VQEGVMRNHN"
     gene            28576..29148
                     /locus_tag="OQQ26_002000"
     CDS             28576..29148
                     /locus_tag="OQQ26_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1857462.1"
                     /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA
                     IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV
                     LPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINKGGTKADLTLVPVQQTAVPV
                     QASGGATTTVPSTSPTQVNPSSAVPAPTQY"
BASE COUNT         7400 a         7130 c         7903 g         6738 t
ORIGIN      
        1 gcggcaaacg aatggggtaa acatgcggat tttttagtaa gtatttcgag agggatatgt
       61 ttctaatgct aagaaaaaag gtgccgtagc accttttgaa ctgagaggtt gtgttaccac
      121 acagcagcca gcagcgtatg tgagtccggt accataaaat caacggacat catcaccgag
      181 agggcagtga tggcgatgat agagaagccg aacagcttgc gcgcccagat tctgtcatca
      241 gcaactttat aaccgcgcag ggccatacct aaccaccaga cgctcaccgc cgcggcgacc
      301 accagatatt tatatccagc gtaaccgcca agagagagca tcagcgtggc aacggcaaaa
      361 gcgatgatat acagcgtgat gtgattcttc gccactgaaa tgccttttac cactggcaat
      421 accggaatgt ttgccgcctg gtaatcctta aagcggaaaa tggcgatggc ataggagtga
      481 ggcatttgcc acaggctgaa gatagccagc aggatcgctg cgccgctatc gaactcgccg
      541 gttactgcac agtagccaat caccggcggc gcagcgccgg agagcgaacc aatcaatgtg
      601 ccgtagaccg agtggcgttt catgtacagg ctataaacgc cgacataaac cacaaagccc
      661 atcaccccca gccagcaggc cagcggattc gcgccaaacc acagcagcat aaagccagca
      721 aagcctagca aggtggcgta caccagcgag acagtaggag agatcaggcc tttaaccagc
      781 acccgattct tcgtcctttc catctttctg tcgatatccc tgtcgatgta gttgttaaac
      841 acacaacccg acgccacaac cagtgacacc ccaaccagcg tgtagataaa caggggataa
      901 tcaatgctgc cctttgaggc cagcaggaat cccccaatca ccgagatcag gttgccaaag
      961 atgatgcctg gtttcgttac ttgcaggtat tgcttaaaca tcataaccgc cgctcttagt
     1021 gcatcatcat gttgtagttg aggttccaca taatccagat ggagcctaca accaggatag
     1081 cgatgattag cacggtgaag acaaacgccg tcatgttcca gccttcatct gatttggtat
     1141 tcatgtgcag gaagcacacc agatgcacca gaacctgtac cactgccatt gccaggattg
     1201 ttcccagaat tacggccgga gaggcagccc ctgtcatcac catccagaac ggaatcaccg
     1261 tcagaatgat cgacaggata aagcctgtca tgtaggtttt tacgctgcca tgggacgcgc
     1321 cgctgtgatc ggtagaatga ctcattacat cgcccccatc agataaacaa cagtgaacac
     1381 acagatccaa accacatcca ggaagtgcca gaacaggctc aggcacatga tgcgggtacg
     1441 gttagtgctg gtcaggccgc gacgagcgat ttgtaccatc agcaccgcca tccagataag
     1501 accggaagtg acgtgcagac cgtgcgtgcc gaccagcgca aagaacgctg acaggaagcc
     1561 gctgcgatcc ggacccatgc cgttaacaat caggtgatgg aattcataga tttccatccc
     1621 gataaatccg gcgccaaaca accaggtcaa cgccagccag gagataacct ggcttttgtt
     1681 gtttttgtac atggcaatag ccgccatgcc gtaggtgatg gagctgaaca acagcaagaa
     1741 agtttcaacc agaacgaacg gcagttcgaa aatgtcctta cctgtcgggc cgcctgcggt
     1801 gccgttcacc agaacggcat aggtagcaaa caagatagag aacagaatgc agtcgctcat
     1861 caggtagatc caaaatccga agattttggt tccgcctgca tcgtggtgcc cgtgttcgtg
     1921 cgcgtgggca gtcgcgtgcg tcaaagtatc agttgccatt tttcagccct gccttagtaa
     1981 tctcatcgaa atgctggttt tccagttttt cgatttctgc caccggcacg tagtaatcca
     2041 cgtcctcgtc gaagcttttc acgatccagg tgatgatcat gcctgcgaag ccaacaatcg
     2101 ccagccacca gatatgccag atcatggcga aaccgaagat ggtggagaaa gccgcaatga
     2161 cgatacctgc accgctgttt ttcggcatat gaatttcttc atagtggtca ggctttttat
     2221 acgcttcgcc tttctctttc atttcccaga atgcatcacg ttcgtgaacg tgcggcacta
     2281 cggcaaagtt atagaacgga ggcggggaag aggttgccca ctccagcgta cggccacccc
     2341 acgggtcgcc agtcaggtca cggttctggt cgcggtcgcg aatagaaacg tacatctgaa
     2401 taacgaggca gagaataccc agcgcaatca gtactgcacc gctggctgca atcatcagca
     2461 tggtgtggaa ctgcgggtca atctgctggc tcaaacgacg ggtcatgccc atgaagccca
     2521 gcgcatacag cggcataaag gcaacgaaga agccgatgat ccagaaccag aacgcgcgtt
     2581 taccccaggt ttcgttcagt ttgaaaccga acgctttagg ccaccagtag gtcatccctg
     2641 cgaagcagcc gaagaccacg ccgccgatga tcacgttatg gaagtgcgca atcaggaata
     2701 ggctgttatg cagaacgaag tccgcgcccg gtactgccag cagcacgcca gtcataccgc
     2761 ccaccgagaa ggtgacgata aaaccgatag tccacagcat cgcagaatgg aacacgatgc
     2821 ggccctgata catggtgaac agccagttga agatcttcac cccggtcggg atggcgataa
     2881 tcattgtggt gataccaaag aaggcgttta cgttcgcgcc cgcacccatc gtaaagaagt
     2941 ggtgcagcca aacgatgaac gacagcacgg tgatacagac ggttgcccat accagcgagg
     3001 tataaccaaa cagacgttta cgcgagaagg ttgccgcaat ttcggagaac acaccgaaaa
     3061 caggcaggat caggatgtaa acttccgggt ggccccaggc ccaaatcagg ttgatgtaca
     3121 tcatcatgtt gccacccata tcgttggtaa agaaatgggt gcccagatag cgatccaggg
     3181 tcaacaacgc aacggtaacc gtcagaattg ggaaggaagc aataatcagt acgttcgcgc
     3241 acagtgatgc ccaggtaaat actggcatct tgaacatggt catgcccggt gcgcgcatct
     3301 tcagaatggt aacgaagaag ttgataccgg taagcgtcgt acctataccg gatagctgga
     3361 gactccatat ccagtaatcg acaccgactc ccggactgta ctctattccc gatagcggtg
     3421 gataggccag ccagccggtc tgcgcaaatt cgcccacgcc gagagaaacg ttaaccagaa
     3481 tcacaccaac aacagtaaac cagaagctta agttgttgag gaacgggaac gcaacgtcac
     3541 gcgcgccgat ctgcagcgga accaccaggt tcatcagacc gataacgaaa ggcatcgcca
     3601 cgaagaagat cataatcacg ccgtgcgcgg tgaagatctg atcgtagtgg tgaggtggca
     3661 ggaagcccgc ttcacccgcc gaggcaagag cctgctggct acgcatcata atggcgtcag
     3721 caaaaccacg cagcaacatc acaatcgcca cgatgatata catgataccg aggcgtttat
     3781 ggtcgacgga ggtcagccac tctttccaca ggtaggtcca cttaccgaag taagtgatca
     3841 ggccaacgag cgccagacct cccaaaataa tgccagcgat cgtaaccatg acgataggtt
     3901 catggaacgg gactgcatca agtgataatt ttccgaacat ctttattctt cctcaacccc
     3961 tttaatgggc ggattccgcg tggctcatgt ccatgctctt accgtgagcc ataaacttgt
     4021 taattacatc ggcaaacaag tctggtttca cgttggagaa atattccacc tggttgtatt
     4081 cgctaggcgc ggccagtttt tcgaacgctg ccatgtcaga catggagttc ggcgactgtt
     4141 tcgcttttgc gacccattgg tcgaatgcgg cgcgatccgg tgttgcaata gctttgaact
     4201 tcatgcctga gaagcccggg ccgctgtagc tggcggagat accgtcataa gtgccgggtt
     4261 cgttggcgat cagatgcagg cgagtctgca taccggccat ggcataaatc tggctaccca
     4321 gacgcggaat gaagaaggag ttcatcacgg agttggaggt cactttgaag tacaccggag
     4381 tgttcgccgg gaaagcgatt tcattcacgg tagcaatgcc ctgttccggg tagatgaaga
     4441 accatttcca gtccatggaa accacttcga tggtaatggg cttctcgtcg tgtgccagcg
     4501 gcttgctagg ctcaagagcg tgagtggttt tccaggtcag taccgcaagg aagatgatga
     4561 ttaagatagg taccgtccag accacagctt ccactttatt ggagtgtgac cagttcgggc
     4621 tgtacttagc atctttattg ctcgcacggt acttccaggc gaaaccaaca gccatcaaga
     4681 ttgcgggaat aacgacaatc aacatcaggc caaatgccgt cagtatcagt gaacgttgct
     4741 ccagaccaat ctgtcctttg ggatctaaca gcgcagaatt acagccactg agcaatacag
     4801 tgcctgcaaa taatgacaac catcccaaac ttttattgta tttcctgagt ctcatttaac
     4861 gacctcaatt ccacgggatc tggtggcgtt taaagtgtgt gggcatttta cgggaaggtt
     4921 aaattactgt aaatatgatt aaattcctgt tacttggatt tggctgtcag gtcacatata
     4981 ttgcaaaaca tatcaagttg attttaagaa gttgttgtaa aagggcgtta taacgaaagg
     5041 ggagtgcaga aggagtttgg acgggcaatt ggtataacca atctggaata aaacaattgt
     5101 tcaacaaata attataatta tggtgacaat tgggtgggga gaaaataaag actcattagc
     5161 tgaatcgtgt aagaaaaaat agaattcata aatggcgtca ataatttcca aacgctaagc
     5221 cgcacaaaag aacaaatatt attaagcgat actgatgttt atttagccgt aataattacg
     5281 gcgagtgatt actacagcta aataatattt acagattacg tcagatgcgt ttttcgtaga
     5341 gccagataat ccagcaaacc accaagcacg acgccagaaa gggcgactaa aaccccgact
     5401 tccagcagag caggcaggaa agagaagtgc gtcaaatcca gcgcgtccat cgtcaacagc
     5461 agtaaccaca cggccaacag gctgacgccc gccgccagtg tccacatggc aaaggcataa
     5521 cctgccggat attcggtacg ggagataaag ttgtcattta ctcgtgtata ttcaagcgtc
     5581 tggcggcaaa ccagcagcaa aataagcccc ggtacggcag cggcgacgga gaatagatag
     5641 aatgtcgacc agccgtgtgc ttcaacaaac caacccgcca cggggccgac ataaactcgc
     5701 cctacagcgg aaagcgctga gagcagggca aattgagtag cggaaaatga cttattacac
     5761 agcgtcatta acagcgcgac aaaggctgat gtgcccatcc cgccacagag gttttcgaaa
     5821 aagacggctg cgcccatgct gtagagatgc ttatcagtaa tcgacagcag ccagtaacca
     5881 gcgttagacg caccttgtaa aatgccgaaa atcagcagcg cccggaacag cgacaggcgc
     5941 tgcatcaaaa tcccaccgta caatgcgccc acaatggtcg ccagtaagcc aagcgttttg
     6001 tttaccacgc ctacttcacc cgcatcaaac ccgacgccgc gaatcaaaaa cgtggttgtc
     6061 aggctcatgg cgaatgcgtc gcccagctta tacagcacga taagaagcaa aataagccag
     6121 gcattattgc gaccaaagaa atctcgcaga ggtgcaacaa ccgcttgttc cagcgttttg
     6181 ggcacaggaa tggtgtcggt tggttctggt gcaagcaacg tcgcgataat acaggggatc
     6241 aacagcgccg ccatcaacca gtacatgccc tgccagccca gccatttatc tgccagccac
     6301 agggctaggc cgccggaaac cagcatccct aaacggtaac ccagaacgct gattgccgcg
     6361 cccgcaccac gttcttctgc cgggagcaca tcggttttcc acgcatcgaa gacaatatcc
     6421 tgggaggccg agcaaaaagc gatcaccacc gccagcgccg ccatccagcg gagttgggtg
     6481 cctggttcga gaaaacccat cgccgcaatg gcgactaata acaggatttg cgtggcgagc
     6541 agccaaccgc gccgccgccc aaaaaatgga ggcgtgtagc ggtccatcag cggtgaccag
     6601 aggaatttaa aaacgtaagc ctggcctacc agagagaaga aaccaatggt tttgagatcg
     6661 atattctcga ccgtcatcca ggcctgtaag gtgccggatg tcagggcgag cggtagcccg
     6721 gaagcaaaac ccaggatcag caatatggct gaacgcggct gttgaaaaat acgtaaatat
     6781 tgactggaca tgggcgtcta caggcccggc ttgcaccggg ccagagggca gaaattaacg
     6841 cgcgttctgc ttgatgaatt cgtgaatgct ggtgtcctga gacatatcag cgatggtatc
     6901 ggtcagcaca ctgttaaccg catcggcgat atttttgttg gaggcctgga acgcaccttc
     6961 aacgttgtag ctggcacgat agtttttggt cattttgttg ccattctgcg cggtagcgat
     7021 gatggcgata tccgctttgg tcgcgatgtt gtagcgcacg ttgccctggg acacgtcagc
     7081 atacagttgg ctaacgatga tttgcagatt aaccgggcca ttcggaccaa ccatgtaacc
     7141 acgcgcggtc atctgttttt ccagcacttc ttgcagcagg aaacgcagat cgcgggaggc
     7201 ggtcagggta acgatttgat tatcgcgggt gacttttgcc agcgcctgat cggtacgctg
     7261 atcggcacca ttaatgctta cggtgacgcc catcaggctt ggatcctgct gtggcagtgt
     7321 aatcgtcggt gaaacttcaa tagttgttgg cggttttgcg catcctgcaa gcataaacag
     7381 agcaactaac gggaagagga tttttttgaa catgttcggg ctctcagaga ctcttaagcg
     7441 tgtttggtaa aaattcccgc catcataaca ttgccaacgg cgaggggaag tgggtaaggc
     7501 atgtaaattc atcatgttga cgaaataatc acccctggta aaagaaacgc tgatgcgagg
     7561 cctgtgtttc aatctttaaa tcagtaaact tcatacgctt gacggaaaaa ctaggacgaa
     7621 acctaaatat ttgttgttaa gctgcaatgg aaacggtaaa agcggctagt atttaaaggg
     7681 atggatgaca tctcagcgtt gtcggaggag atatttcatg atgatacgtg agcggataga
     7741 agaaaaatta agggcggcgt tccaacccgt attcctcgaa gtagtggatg aaagctatcg
     7801 tcacaatgtc ccagccggct ctgaaagcca ttttaaagtt gtgctggtca gcgatcgttt
     7861 tacgggtgaa cgttttctga atcgtcatcg aatgatttac agtactttag cggaggaact
     7921 ctctactacc gttcatgcgc tggctctgca tacttacact attaaggagt gggaagggtt
     7981 gcaggacacc gtctttgcct ctcctccctg tcgtggagca ggaagcatcg cgtaaaaacg
     8041 catttgcaac tgtcggcgct tttccagtat gttgctaaag tttttatgaa aaacggcctg
     8101 cgggccgttt tgttttgtct ggattttgcg ctttttgccc agcattcaga cgaaaattgc
     8161 ccgggaattg tgaaaaaata cgcgacagcg cgcaataacc gttctcgact cataaaagtg
     8221 atgccgctat aatgccgcgt cctatttgaa tgctttcggg atgattctgg taacagggaa
     8281 tgtgattgat tataagaaca tcccggttcc gcgaagccaa caacctgtgc ttgcggggta
     8341 agagttgacc gagcactgtg attttttgag gtaacaagat gcaagtttca gttgaaacca
     8401 ctcaaggcct tggccgccgt gtaacgatta ctatcgctgc tgacagcatc gagaccgctg
     8461 ttaaaagcga gctggtcaac gttgcgaaaa aagtacgtat tgacggcttc cgcaaaggca
     8521 aagtgccaat gaatatcgtt gctcagcgtt atggcgcgtc tgtacgccag gatgtcctgg
     8581 gcgacctgat gagccgtaac ttcattgacg ccatcattaa agaaaaaatc aatccggctg
     8641 gcgcaccgac ctatgttccg ggcgaataca agctgggtga agacttcacc tactctgtag
     8701 agtttgaagt ttatccggaa gttgaactgc agggtctgga agcgatcgaa gttgaaaaac
     8761 cgatcgttga agtgaccgac gctgacgttg acggcatgct ggatactctg cgtaaacagc
     8821 aggcaacctg gaaagaaaaa gacggcgctg ttgaagcaga agaccgtgtg accatcgact
     8881 tcaccggttc tgtagacggc gaagagttcg aaggcggtaa agcgtctgat ttcgtactgg
     8941 cgatgggcca gggtcgtatg atcccgggct ttgaagacgg tatcaaaggc cacaaagctg
     9001 gcgaagagtt caccatcgac gtgaccttcc cggaagaata ccacgcagaa aacctgaaag
     9061 gtaaagcagc gaaattcgct atcaacctga agaaagttga agagcgtgaa ctgccggaac
     9121 tgactgcaga attcatcaaa cgtttcggcg ttgaagatgg ttccgtagaa ggtctgcgcg
     9181 ctgaagtgcg taaaaacatg gagcgcgagc tgaagagcgc catccgtaac cgcgttaagt
     9241 ctcaggcgat cgaaggtctg gtaaaagcta acgacatcga cgtaccggct gcgctgatcg
     9301 acagcgaaat cgacgttctg cgtcgccagg ctgcacagcg tttcggtggc aacgaaaaac
     9361 aagctctgga actgccgcgc gaactgttcg aagaacaggc taaacgccgc gtagttgttg
     9421 gcctgctgct gggcgaagtt atccgcacca acgagctcaa agctgacgaa gagcgcgtga
     9481 aaggcctgat cgaagagatg gcttctgcgt atgaagatcc gaaagaagtt atcgagttct
     9541 acagcaaaaa caaagaactg atggacaaca tgcgcaatgt tgctctggaa gaacaggctg
     9601 ttgaagctgt actggcgaaa gcgaaagtga ctgaaaaaga aaccactttc aacgagctga
     9661 tgaaccagca ggcgtaattt acgcagcata acgcgctaaa ttcgcacaaa ggcccgtcac
     9721 cgccaggtgg tgggcttttt tttgtcatga attttgcatg gaaccgtgcg aaaagcctct
     9781 ttcggtgtta gcgtaacaac aaaagattgt tatgcttgaa atatggtgat gccgtaccca
     9841 taacacaggg actagctgat aatccgtcca taaggttaca atcggtacag caggtttttt
     9901 caattttatc caggagacgg aaatgtcata cagcggcgaa cgagataact ttgcacccca
     9961 tatggcgctg gtgccgatgg tcattgaaca gacctcacgc ggtgagcgct cttttgatat
    10021 ctattctcgt ctacttaagg aacgcgtcat ttttctgact ggccaggttg aagaccacat
    10081 ggctaacctg attgtggcgc agatgctgtt cctggaagcg gaaaacccag aaaaagatat
    10141 ctatctgtac attaactccc caggcggggt gatcactgcc gggatgtcta tctatgacac
    10201 catgcagttt atcaagcctg atgtcagcac catctgtatg ggccaggcgg cctcgatggg
    10261 cgctttcttg ctgaccgcag gggcaaaagg taaacgtttt tgcctgccga attcgcgcgt
    10321 gatgattcac caaccgttgg gcggctacca gggccaggcg accgatatcg aaattcatgc
    10381 ccgtgaaatt ctgaaagtta aagggcgcat gaatgaactt atggcgcttc atacgggtca
    10441 atcattagaa cagattgaac gtgataccga gcgcgatcgc ttcctttccg cccctgaagc
    10501 ggtggaatac ggtctggtcg attcgattct gacccatcgt aattgatgcc agaggcgcaa
    10561 ctgtgccgct atacttatcc agggcggcac aacgctgtaa gcggcttgcg cctgagaatg
    10621 gcatttgcgt cgtcgtgtgc ggcacaaaga acaaagaaga ggttttgacc catgacagat
    10681 aaacgcaaag atggctcagg caaattgctg tattgctctt tttgcggcaa aagccagcat
    10741 gaagtgcgca agctgattgc cggtccatcc gtgtatatct gcgacgaatg tgttgattta
    10801 tgtaacgaca tcattcgcga agagattaaa gaagttgcac cgcatcgtga acgcagtgcg
    10861 ctaccgacgc cgcatgaaat tcgcaaccac ctggacgatt acgttatcgg ccaggaacag
    10921 gcgaaaaaag tgctggcggt cgcggtatac aaccattaca aacgtctgcg caacggcgat
    10981 accagcaatg gtgtcgagtt gagcaaaagt aacattctgc tgatcggtcc gaccggttcc
    11041 ggtaaaacgc tgctggctga aacgctggcg cgcctgctgg acgtcccgtt caccatggcc
    11101 gacgctacca cgctgaccga agccggttat gtgggcgaag acgttgaaaa catcattcag
    11161 aagctgttgc aaaagtgcga ttacgacgta cagaaagcgc agcgcgggat tgtctacatc
    11221 gatgaaatcg acaagatttc tcgtaagtca gacaacccgt ctattacccg tgacgtttcc
    11281 ggtgaaggcg tacagcaggc actgttgaaa ctgatcgaag gtacggtagc tgctgttcca
    11341 ccgcaaggtg ggcgtaaaca tccgcagcag gaattcttgc aggttgatac ctctaagatc
    11401 ctgtttattt gtggcggtgc gtttgccggt ctggataaag tgatttccca tcgtgtagaa
    11461 accggctccg gcattggttt tggcgcgaca gtaaaagcga agtccgacaa agcaagcgaa
    11521 ggcgagctgc tggcgcaggt tgaaccggaa gatctgatca agtttggtct tatccctgag
    11581 tttattggtc gtctgccggt tgtcgcaacg ttgaatgaac tgagcgaaga agctctgatt
    11641 cagatcctca aagagccgaa aaacgccctg accaagcagt atcaggcgct gtttaatctg
    11701 gaaggcgtgg atctggaatt ccgtgacgag gcgctggatg ctatcgctaa gaaagcgatg
    11761 gcgcgtaaaa ccggtgcccg tggcctgcgt tccatcgtag aagccgcact gctcgatacc
    11821 atgtacgatc tgccgtccat ggaagatgtc gaaaaagtgg ttatcgacga gtcggtaatt
    11881 gatggtcaaa gcaaaccgtt gctgatttat ggcaagccgg aagcgcaaca ggcatctggt
    11941 gaataattaa ccattcccat acaattagtt aaccaaaaag gggggatttt atctcccctt
    12001 taatttttcc tctattctcg gcgttgaatg tgggggaaac atccccatat actgacgtac
    12061 atgttaatag atggcgtgaa gcacagtcgt gtcatctgat tacctggcgg aaattaaact
    12121 aagagagagc tctatgaatc ctgagcgttc tgaacgcatt gaaatccccg tattgccgct
    12181 gcgcgatgtg gtggtttatc cgcacatggt catcccctta tttgtcgggc gggaaaaatc
    12241 tatccgttgt ctggaagcgg cgatggacca tgataaaaaa attatgctgg tcgcgcagaa
    12301 agaagcttca acggatgagc cgggtgtaaa cgatcttttc accgtcggga ccgtggcctc
    12361 tatattgcag atgctgaaac tgcctgacgg caccgtcaaa gtgctggtcg aggggttaca
    12421 gcgcgcgcgt atttctgcgc tctctgacaa tggcgaacac ttttctgcga aggcggagta
    12481 tctggagtcg ccgaccattg atgagcggga acaggaagtg ctggtgcgta ctgcaatcag
    12541 ccagttcgaa ggctacatca agctgaacaa aaaaatccca ccagaagtgc tgacgtcgct
    12601 gaatagcatc gacgatccgg cgcgtctggc ggataccatt gctgcacata tgccgctgaa
    12661 actggctgac aaacagtccg ttctggagat gtccgacgtt aacgaacgtc tggaatatct
    12721 gatggcaatg atggaatcgg aaatcgatct gctgcaggtt gagaaacgca ttcgcaatcg
    12781 cgttaaaaag cagatggaga aatcccagcg tgagtactat ctgaacgagc aaatgaaagc
    12841 tattcagaaa gaactcggtg aaatggacga cgcgccggac gaaaacgaag ccctgaagcg
    12901 caaaatcgac gcggcgaaga tgccgaaaga ggcaaaagag aaagcggaag cagagttgca
    12961 gaagctgaaa atgatgtctc cgatgtcggc agaagcgacc gtagtgcgtg gttatatcga
    13021 ctggatggta caggtaccgt ggaatgcgcg cagcaaggtc aaaaaagacc tgcgtcaggc
    13081 gcaggaaatc cttgataccg accattatgg tctggagcgc gtgaaagatc gaatccttga
    13141 gtatcttgcg gttcaaagcc gtgtcaacaa aatcaaggga ccgatcctct gcctggtagg
    13201 gccgccgggg gtaggtaaaa cctccctggg tcagtccatc gccaaagcca ctaggcgtaa
    13261 atatgtccgt atggcgctgg gcggcgtgcg tgatgaagcg gaaatccgtg gtcaccgccg
    13321 tacttacatc ggttctatgc cgggtaaact gatccagaaa atggcgaaag tgggcgtgaa
    13381 aaacccgctg ttcctgctcg atgagatcga caaaatgtct tctgacatgc gaggcgatcc
    13441 ggcctctgca ctgcttgaag tgctggatcc agagcagaac gtagcgttca gcgaccacta
    13501 cctggaagtg gattacgatc tcagcgacgt gatgtttgtc gcgacgtcga actccatgaa
    13561 cattccggca ccgctgctgg atcgtatgga agtgattcgc ctctccggtt ataccgaaga
    13621 tgaaaaactg aacatcgcca aacgtcacct gctgccgaag cagattgaac gtaatgcact
    13681 gaaaaaaggt gagctgaccg tcgacgatag cgccattatc ggcattattc gttactacac
    13741 ccgtgaggcg ggcgtgcgtg gtctagagcg tgaaatctcc aaactgtgcc gtaaagcggt
    13801 taagcagtta cttctcgata agtcattaaa acatatcgaa attaacggcg ataacctgca
    13861 tgactatctc ggtgttcagc gttttgacta tggacgcgcg gataacgaaa accgtgtcgg
    13921 tcaggtaacc ggtctggcgt ggactgaagt gggcggtgac ttgctgacca ttgaaaccgc
    13981 atgtgttccg gggaaaggca aactgaccta taccggttcg ctcggcgaag tgatgcagga
    14041 gtccattcag gcggcgttaa cggtggttcg tgcgcgtgcg gaaaaactgg ggatcaaccc
    14101 tgatttttac gaaaaacgcg acatccacgt ccacgtaccg gaaggtgcga cgccgaaaga
    14161 tggtccgagt gctggtattg ctatgtgcac cgcgctggtt tcttgcctga ccggtaaccc
    14221 ggttcgtgcc gatgtggcaa tgaccggtga gatcactctg cgtggtcagg tactgccgat
    14281 cggtggtttg aaagaaaaac tactggcagc gcatcgcggc gggattaaaa cagtgttaat
    14341 tccgttcgaa aataaacgcg atctggaaga gattcctgac aacgtaattg ccgatctgga
    14401 cattcatcct gtgaagcgca ttgaggaagt tctgactctg gcgctgcaaa atgaaccgtc
    14461 tggcatgcag gttgtgactg caaaatagtg acctcgcgca aaatgcacta ataaaaacag
    14521 ggctggcagg ctaattcggg cttgccagcc tttttttgtc tcgctaagtt agatggcgga
    14581 tcgggcttgc ccttattaag gggtgttgta aggggatggc tggcctgata taactgctgc
    14641 gcgttcgtac cttgaaggat tcaagtgcga tataaattat aaagaggaag agaagagtga
    14701 ataaatctca attgatcgac aagattgctg caggggctga tatctctaaa gctgcggctg
    14761 gccgtgcgtt agatgctatt attgcttccg taactgaatc tctgaaagaa ggggatgatg
    14821 tagcactggt aggttttggt acttttgccg ttaaagagcg tgctgcccgt actggccgca
    14881 acccgcagac cggtaaagag atcaccatcg ctgctgctaa agtaccgagc ttccgtgcag
    14941 gtaaagcact gaaagacgcg gtaaactaag cgttgtcccc agtggggatg tgacgaagtt
    15001 caagggcgca tctactgatg tgcctttttt atttgtattc ggtgactttc tgtgtcttgt
    15061 gggctgacaa ttgcccccgt ttcttgtcac aataggcctt tgcgcgcatc gatacgttgc
    15121 gtgaggtaca cagtcatcta cagcggagtg ttgttacacc atgatggaca gcttacgcac
    15181 ggctgcaaac agtctcgtgc tcaagattat tttcggtatc attatcgtgt cgttcatatt
    15241 gaccggcgtg agtggttacc tgattggcgg aggcaataac tacgccgcaa aagtgaatga
    15301 ccaggaaatc agccgtgggc aattcgagaa cgccttcaac agcgagcgta atcgcatgca
    15361 gcaacagctg ggcgatcaat actccgagct ggcagcgaac gaaggctata tgaaaaccct
    15421 gcgtcaacag gtgctcaatc gtctgatcga cgaggcgctg ctggatcagt acgcacgtga
    15481 gctgaaactg ggtatcagcg atgagcaggt taaacaggcg attttcgcga tcccagcctt
    15541 ccaggttgac ggcaaatttg ataacagccg ctataacggt atcctcaacc agatggggat
    15601 gaccgccgat cagtacgccc aggcgctgcg taaccagctc actacccaac agctgattaa
    15661 cggcgttgcc ggtaccgatt ttatgctgaa aggtgaaacc gacgagctgg cggcactggt
    15721 cgctcaacaa cgcgtggtac gtgaagcgac tatcgatgtt aacgcgctgg cggcgaagca
    15781 gcctgtgacc gaacaggaaa ttgccagcta ctacgaacaa aacaaaaaca atttcatgac
    15841 gccggaacaa ttccgcgtga gttacatcaa gctggatgcc gcaacgatgc agcaaccggt
    15901 tagcgatgcg gatatccaga gctactacga tcagcatcag gatcaattca cccagccgca
    15961 gcgtacccgc tacagcatca tccagaccaa aactgaagat gaagcgaaag cggtacttga
    16021 tgggctgaat aaaggcggtg attttgctgc attagccaaa gaaaaatctg ccgatattat
    16081 ctctgcccgt aacggcggcg atatgggttg gttagaagat gccactatcc ccgacgaact
    16141 gaaaaatgct ggtctgaaag aaaaaggcca actgtctggt gttatcaaat cttcggtcgg
    16201 tttcctgatt gtacgtctgg acgacattca gccagcgaaa gtgaagtcgt tagacgaagt
    16261 gcgtgacgac attgcggcga aagtgaaaca cgaaaaagcc ctcgatgcgt actatgcgct
    16321 gcagcagaaa gtgagcgatg cggcaagcaa cgacaccgag tctctggccg gtgcagagca
    16381 agcagccggc gttaaagcca ctcagacggg ttggttcagc aaagataacc tgccggaaga
    16441 gttgaacttc aagccggttg ccgacgctat ctttaacggc ggtctggtag gtgaaaacgg
    16501 cgcgccgggc atcaactctg acatcatcac cgtagacggc gaccgcgcat tcgtgctgcg
    16561 catcagcgag cacaaaccgg aagcggtgaa accgttggca gatgttcagg aacaagttaa
    16621 ggcactggtt cagcacaaca aagctgaaca acaggcgaaa gtggatgctg agaaactgct
    16681 ggttgatttg aaagccggca aaggtgcgga agctatgcag gttgccggtc tgaaatttgg
    16741 cgagccgaaa accttaagcc gttccggtcg tgacccgatt agccaggcgg cgtttgcact
    16801 gccactgcca gcgaaagaca aaccgaacta cggtatggcg accgatatgc aaggtaatgt
    16861 ggttctgctg gtgctggatg aagtgaaaca aggttcaatg ccggaagatc agaaaaaagc
    16921 gatggtgcag ggtatcaccc agaacaacgc acaaatcgtc tttgaagctc tgatgagtaa
    16981 cctgcgtaaa gaggcgaaaa tcaaaattgg cgatgcgctg gaacagcaat aatcctgaag
    17041 ccgcctcgca aaaaaatgcg ttgcatctgt aacaagaaaa ggtcgctttc gcggcctttt
    17101 ccatttctga acattgccat ttgtttactg ttttcactgc cgttaaggtg attcaactgt
    17161 taacaaacaa ggagaaaaca gtatgaaaca cggaattaaa gcactgctca ttaccctgtc
    17221 tctggcttgt gccggaatgt ctcatagcgc gctggcggca gctcctgcgg cgaaaccgac
    17281 aacggtagaa accaaagcgg aagctcctgc agcacaaagt aaagcagcag taccggcgaa
    17341 agccagtgac gaagaaggca cccgggtcag cattaataat gccagcgcgg aagagctagc
    17401 ccgcgcgatg aatggcgttg gcctgaagaa agcgcaggcg attgtcagtt atcgcgaaga
    17461 gtacggtccg tttaaaacgg tggaggatct aaagcaggtg ccggggatgg gcaattcgct
    17521 ggtggagcgt aatctggcgg tattaaccct gtaattaatt tgcatagtgg caattttttg
    17581 ccagactgaa gaggtcatac cagttatgac ctctgtactt ataacagttc ttataacaac
    17641 aacgtaaggt tattgcgcta tgcaaacaca aatcaaagtt cgtggatatc atctcgacgt
    17701 ttaccagcac gtcaacaacg cccgctacct tgaatttctc gaagaagccc gctgggatgg
    17761 gttggaaaat agcgacagtt ttcactggat gacggcccat aacatcgcct tcgtcgtggt
    17821 caatatcaat attaactatc gtcgcccagc ggtattaagc gacctgttaa ctattaccag
    17881 tcagttgcag caattaaacg gtaaaagcgg catcttaagc caggtcatta cactggagcc
    17941 ggaagggcag gtggtagcgg atgcgcttat tacgtttgtt tgtattgatc ttaaaacgca
    18001 gaaagcatta gctctggaag gggaattgcg cgaaaagctg gagcagatgg ttaagtaaac
    18061 gttttgtggt gccggatgct caagccgcat ccggcgacac tcggaataat tacttcaacc
    18121 cggttttctg cttcatcgct gccatcaccg tcggtttatc ggccagataa tgattcaaac
    18181 cgttggcacg taaattacac gccgcacaat gaccgcaacc gtcgccttta atgccgttat
    18241 agcaggtcaa cgtttcgtta cggactaaat ccagtttgcc gtaataatct gccagcgccc
    18301 aggtttccgc tttatcaatc cacatcagcg gcgtttcaaa acgaatatct ttcgccatgc
    18361 ccaaactgac ggcatggttt agtgctttca caaactcatc gcggcaatcc gggtagccgg
    18421 agaaatccgt ttcgcagacg ccagtaatta cggcttctgc ttttacctga tacgcatata
    18481 ttgccgccag cgtcaggaac aaaatattac gccctgggac aaacgtattc gggatgccat
    18541 cggcttcagg ttcataatca ggcaccggaa tgctgtcacg cgtcaggctg ctgaccgcca
    18601 gctcgttgag cagcgttaca tcaagaacct tatgcgcgcg tgcccccagt ttcagcgcca
    18661 gttcgcgtgc cacgtcgatt tctgcgcaat ggcgctgacc gtaatcgaac gtcacgcaat
    18721 ggacttcatc atattgttgt aatgcctgca ccagacaggt ggtggaatcc tgacctccac
    18781 tgaacacaac gacagcacgt ttcatagata atcctgcttg aacaataaaa gcgttatggt
    18841 aacgcctgcg attaacccgg accagctatt cattgcgacg gcgcgggaag ccaggcttcg
    18901 gtaaattcaa accagccgcg cggtgtcagt cgcacaccgt ttacgccggg aggggcacta
    18961 atgcgatagt gatagttgaa cagcggcgtc agcgtcgcat ctgtcattaa ctggctaaaa
    19021 accgctttca gggcattaaa tcggttttct tcatcaggca ttatttgcac ggcatccagt
    19081 gtcgattgta gatgtgcgta tgctggagcg tcgaaaacat gtggccacag cggatcgcag
    19141 cgcagccatt gctccagagt atattccggt gcttcgccaa ttaatctgtc gcccatcatg
    19201 aggtctgcgt gtgccagttg gggcgtgtcg tcccagtttt ttgcgttatg aaaaataatt
    19261 gtgagttcac agccttccgc tgccagtgtc gcctgtaggc gttctgccat ggtatgaagt
    19321 tctatcggta ggtgataaac cagcgtcaag gttttcggta gtttgacttc atccggtact
    19381 tgccaatgcg gaatagtcca gcctggcagt aatgcatgac tggcggtgat caggttttct
    19441 ccgacttcta acgtttgtaa taaaccggat tgatgaataa tggagattac ttttcgcgcc
    19501 tgccagaggg agagtcgggg acttttgcgc aacgttaaat agcaaaaacc taaactgatg
    19561 ccgctactga cctggctgac gcgttgcagc tcctccggtt tgccgatggt gatttgcacg
    19621 ggatgccgac aactggttcc caaatctttt tcgaaaagcg gcggagttat ccagtactca
    19681 accgctttaa gcagcggatg acgcaaatgg taataatcat ggctctccag gcgcaccagc
    19741 tccgctgtga attgtgttaa gcgaaaagga ccagtgccga tcagtgggaa ttgcggatgc
    19801 gccagatggc tgcaatagct cgccagccgg tgcgcaagcc agtaatcggg gcgatgtaaa
    19861 aagaaggtca gacactgcgg atgggtgact tcaatacgct tcacgctaat aaataattga
    19921 tccagtgctg gcagttgtaa cagcatcaat aatcgctggt gtaagtgtga ggcttttact
    19981 gcatcgccgt tatgccagtg tagggttgaa cgaagataaa agtcccagcg taacccgtca
    20041 gtagaggttt cccagtgatg cgctaaatcg ccaatcgggc gctgagtatt attatcgaag
    20101 cgggtcaggc cggaaaatat ctgcccggcg agatgctgct cggcacggcc gggcaaaaag
    20161 cctggttgta gcggttcgag cgggcgatag tagggaatac gcaacgtggg tgtatcgttt
    20221 tgccattgtc cgcccataaa cggctgtaac agagtgcgca gctcacctgg ggccagttgc
    20281 gccagctcca gcacatcttg ctgctttccg gtttccagtg cctgttccat catcgcattg
    20341 cgtagcgatt ccggcgtgac ctgaaagcgt aattgtccgc gctttccgcg tcctgactgc
    20401 gcctgccact ccagccatcc cgcctcctgt gcctgacgca acagcgtacg aacatggcgt
    20461 tcgctgcaaa aacagcgttc ggccagttcg ctgacggtga cggtttgcgg ctttccggct
    20521 gaaggttgcc acagacgttg atactggtta agacggttga gcaatcgcat ataaacccgg
    20581 aacaatatta tttaactatt cactattact tccgtatata tcaggtgata ctcaatcacc
    20641 attaaccgtg tcacagagtg gagaaagaaa tggctcgtct ggcagcattt gatatggatg
    20701 gcactttatt gatgcctgac catcatttag gtgagaaaac cctctctact ttggcgcgac
    20761 tgcgtgaacg cgacattacc ctcacttttg ccacggggcg tcatgcgctg gagatgcagc
    20821 atattctcgg ggcgctatcg ctggatgcat atttgattac cggcaacgga acgcgcgtgc
    20881 attctctgga aggtgaactt ttacatcgtg atgatttacc tgcggatgtc gcggagctgg
    20941 tgctgtatca gcaatgggat acccgagcca gcatgcatat cttcaatgac gacggttggt
    21001 ttaccgggaa agagatccct gcgttgttgc aggcatttgt ctatagcggt tttcgttatc
    21061 agataatcga tgtcaaaaaa atgccactcg gcagcgtcac caagatctgc ttctgtggcg
    21121 atcacgacga tcttacacgc ttgcagatcc agctatacga agcattaggc gagcgtgcac
    21181 atttgtgttt ttccgccacg gattgcctcg aagtgctgcc ggtgggctgc aataaaggcg
    21241 ctgcattgac ggtgctgacc caacatttag gtttatcgtt gcgcgattgc atggcctttg
    21301 gtgatgcgat gaacgatcgc gaaatgttag gcagcgtcgg tagcgggttt attatgggca
    21361 atgcgatgcc gcaactgcgc gcggagctcc cgcatttacc ggtgattgga cattgccgaa
    21421 atcaggctgt ctctcactat ttgacgcact ggctggacta tccacatcta ccttattccc
    21481 ccgaataacg agatcccttc cagcaccggg caattgcccg gttttttttg cgttgaattt
    21541 gtcattttgt gccgtggtgt ttaaaccgca cagaataaat tgtcgtgatt tcacctttaa
    21601 aatagaatta aaagagaaga aaattctctg tggaagggct atgttagata aaattgaccg
    21661 taagctgctg gccttactgc agcaggattg caccctctct ttgcaggcac tggctgaagc
    21721 cgttaatctg acaaccaccc cttgctggaa gcgcctgaaa cggctggagg acgacggtat
    21781 ccttatcggc aaaatcgccc tgctggatcc ggaaaaaata ggcctcggcc tgaccgcctt
    21841 tgtgctgata aaaacgcaac atcacagcag cgaatggtat tgccgctttg tcacggtggt
    21901 taccgaaatg ccagaagtgc tggggttctg gcgcatggct ggtgaatacg attatctgat
    21961 gcgcgtctag gttgccgaca tgaaacgcta cgacgagttt tataagcgtc tggtaaacag
    22021 cgtgccgggg ctgtcggacg tcacttccag cttcgcgatg gaacagatta aatacaccac
    22081 ttctttaccc atcgaataaa tatccagaat caagtcagga cacaacgcgt gcgattattt
    22141 gctcaattaa gctggtattt ccgtcgggaa tggcgtcgct atctcggggc tgtcgccttg
    22201 cttgtcatta tcgcgatgct gcaactggtt ccgccaaaag tggttggtat tgttgtcgat
    22261 ggcgtgacag aacaacactt tactaccggg cagatcctga tgtggatcgc caccatggtg
    22321 ctgattgccg ttgtggttta tctcctgcgt tacgtctggc gcgtattgct gtttggtgcg
    22381 tcttaccaac tggctgttga attacgtgaa gattattacc gtcagctaag ccggcagcat
    22441 cctgagtttt acctgcgtca tcgcacgggt gacctcatgg ctcgtgcgac caatgacgtc
    22501 gatcgcgtcg tgtttgccgc cggagaaggg gtgctgacgc tggtggattc actggtaatg
    22561 ggctgcgctg tgttgattat gatgtctacg caaattagct ggcagttgac cttatttgcc
    22621 ctgttgccga tgccagtgat ggcgatcatg attaagcgca acggcgatgc cttgcatgaa
    22681 cgctttaagc tggcacaggc ggcgttttct agtcttaatg atcgcaccca ggaaagcctc
    22741 accagtatcc gcatgatcaa agcctttggt ctggaagatc gccagtcggc gttatttgcc
    22801 gcggatgccg aagataccgg caaaaaaaac atgcgggtgg cgcgtattga tgctcgtttc
    22861 gacccgacaa tctatatcgc gattggtatg gcgaacttgc tggcgattgg cggcggtagt
    22921 tggatggtgg tgcagggcag tttaacgctg ggccagctca ccagttttat gatgtattta
    22981 ggtctgatga tttggccaat gctggcgctg gcatggatgt ttaacattgt ggaacgtggt
    23041 agtgctgcgt acagccgtat tcgtgcgatg ctggcggaag cgccggtggt gaacgatggt
    23101 agcgaacccg tgccggaagg gcgtggcgaa cttgatgtaa atattcacca gttcacgtat
    23161 ccgcagactg accatcctgc gctggaaaac gtcaatttcg ccctgaaacc cggtcagatg
    23221 ctgggtatct gcgggccgac tggttccggc aaaagtaccc tgttgtcgct cattcagcgt
    23281 catttcgacg tcagcgaggg ggatattcgc tttcatgata ttcctctgac gaagttacaa
    23341 ctcgatagct ggcgtagccg cctggcggta gttagccaga caccgttcct tttttccgac
    23401 accgtagcga acaacatcgc gttgggttgc ccgaatgcca cccagcaaga gattgagcat
    23461 gtcgcgcggt tagccagcgt acatgacgat attttgcgtc tgccgcaagg ttacgataca
    23521 gaagtgggcg agcgcggcgt gatgctttcc ggtgggcaaa aacagcgtat ctccattgct
    23581 cgtgcgttat tagtcaacgc ggaaatcctc atccttgatg atgcgctttc ggcggtggac
    23641 ggacgcactg agcaccagat cctgcataac ctgcgtcagt ggggacaggg aagaacggta
    23701 atcatcagtg cccatcgcct ttctgcactg acggaagcca gtgaaattat tgtgatgcag
    23761 cacggacata tcgcccagcg tggcaatcat gatgagctgg cgcaacaaag cggctggtat
    23821 cgcgatatgt atcgctatca acaactggag gcggcgctcg acgacgctcc ggaaattcgc
    23881 gaggaggccg tcgatgcgta gttttagcca actgtggccg actctcaagc gtctgttagc
    23941 gtacggttcg ccgtggcgta aaccgctggg gattgcggtc ctgatgatgt gggttgcggc
    24001 agcggcagaa gtcagtgggc cgctgcttat cagctatttt atcgacaata tggtagcgaa
    24061 aaataacctg ccgttgaaaa tggttgcagg gctggctgcg gcgtatgttg ggctacaact
    24121 gtttgccgct gggctacatt acgcgcagtc gctgctgttt aatcgggcgg cagtaggcgt
    24181 agtgcaacag ttgcgtaccg acgtgatgga tgctgcgtta cgccagccat taagcgagtt
    24241 tgatacccaa cccgtcgggc aggtgatttc ccgcgtcact aatgacactg aagtgatccg
    24301 cgacctctac gttaccgtag tggcaactgt cctgcgtagc gccgcactgg tgggcgcgat
    24361 gctggtggca atgttcagcc tcgactggcg aatggcgctg gtggcgataa tgattttccc
    24421 ggtagtgctg gtggtaatgg tgatatatca acgttacagc acgccgattg tccgtcgtgt
    24481 gcgcgcctat ctggcggata tcaacgacgg ctttaacgaa atcatcaatg gcatgagcgt
    24541 catccagcag ttccgtcagc aggcgcgatt tggcgaacgt atgggtgagg ccagtcgttc
    24601 acactatatg gcgaggatgc aaaccctgcg cctcgacggt tttctgctgc gtccgctgct
    24661 gagtctgttt tcatcgctca ttctttgtgg attgttgatg ctgtttggct tctccgccag
    24721 cggcaccatt gaagtgggcg tgctgtatgc ctttatcagc tatcttgggc gacttaacga
    24781 acccttaatc gaactgacca cgcaacaggc gatgctgcaa caggctgttg ttgctggtga
    24841 gcgcgtgttt gaactgatgg acggaccgcg ccagcaatat ggcaatgatg attacccgtt
    24901 acagagtggc accatcgaag tcgataacgt gtcatttgct tatcgcgatg acaatctggt
    24961 gctaaagaac attaatctct ctgtgccttc gcgtaacttt gtggcgctgg tcgggcatac
    25021 cggcagtggt aaaagtaccc tcgccagttt attgatgggc tattacccgc taacggaagg
    25081 tgagattcgc cttgatggtc gtccattaag ttcgctaagt cacagcgcgc tgcgccaggg
    25141 cgtggcaatg gtgcagcaag atccggtggt gctggcggat accttcctcg ccaacgtgac
    25201 gctggggcgg gatatctccg aagaacgcgt ctggcaggcg ctggaaaccg tgcaactggc
    25261 ggagctggcg cgtagcatga gcgacggtat ttacacgccg ctgggcgagc aggggaataa
    25321 tctctcagtt gggcaaaagc aactgctggc actggcgcgc gtgctggtcg agacgccgca
    25381 aatcctgatc cttgatgagg caaccgccag cattgactcc ggtactgaac aggcgattca
    25441 acatgctctg gcggcggtgc gtgaacatac cacgctggtg gtgattgctc accgcttatc
    25501 gaccattgtt gatgccgaca ctattctggt gcttcatcgt gggcaagccg tggagcaggg
    25561 cactcaccag caactgctgg cggcccaggg acgctactgg cagatgtatc aactgcaact
    25621 tgcgggcgaa gagctggcag ccagcgtgcg tgaagaagaa tcattgagcg cctgaatagc
    25681 gcaatatttc atcgttggtg caaaaatgta acgcactgtg cactgtcata gtgcgttttc
    25741 attttcaatc ttcttaactt cctgctctct ttctcgtttt tcatttctgg cacaccgctt
    25801 gcaatacctt cttcgtgtag cagaaccatt accgaattct gaccggaggg gatctatgaa
    25861 gctggtgacc gtgataatca aaccattcaa gctggaagac gttcgtgaag cgttatcttc
    25921 cattggtatt cagggcctga ccgtcaccga agtgaaaggt ttcgggcgtc agaaagggca
    25981 tgccgagctg taccgggggg cggaatacag cgtcaacttc ctgccaaaag taaaaattga
    26041 tgtggcgatt gctgatgacc aactcgatga agtgatcgat atcgtcagta aggcggctta
    26101 caccggaaaa attggcgacg gtaaaatctt cgtcgctgaa ttgcaacgcg tcattcgtat
    26161 tcgtaccggc gaagccgacg aagcggcgct gtaatctctg gcacacagca acaggaacga
    26221 aaaatgaaga tagcgacgat aaaaactggg cttgcttcac tggcgatgct gccgggactg
    26281 gtaatggctg cacctgcggt ggccgataaa gccgacaatg cgtttatgat gatctgtact
    26341 gcgctggtgc tgtttatgac tattccgggg attgccttgt tttatggtgg gttgattcgc
    26401 ggcaaaaacg tgctgtcgat gctgacgcag gtgacggtga cgtttgcact ggtctgtatt
    26461 ctctgggtgg tttacggtta ttcgctggcg tttggtgagg gcaacaactt cttcggcaat
    26521 attaactggt tgatgctgaa aaacatcgaa ctgacggcgg tgatgggcag catttatcag
    26581 tatatccacg tggcgtttca gggatcgttt gcctgcatta ccgtaggctt gatagttggg
    26641 acgctggcgg aacgaatccg cttctcagct gtgttgattt tcgtggtggt atggctgacg
    26701 ctctcttaca ttccgattgc gcatatggtg tggggcggcg gtttgctggc ttctcacggt
    26761 gcactggatt tcgcgggtgg cacagtggtg cacattaacg ccgcaatcgc cggtctggtg
    26821 ggcgcgtatc tgataggcaa acgcgtgggc ttcggcaaag aggcgtttaa accgcacaac
    26881 ctgccgatgg ttttcaccgg gactgccatt ctctatatcg gttggtttgg ctttaacgcc
    26941 gggtcagcgg gcacggcgaa tgaaatcgcg gcactggcat ttgtgaatac tgtggtcgca
    27001 acggcggcgg caattcttgg ctggatcttc ggtgaatggg cgctgcgtgg taagccttca
    27061 ctgctggggg cgtgttctgg cgcgattgcc ggtctggcgg gcttgtgggg cgttaccatg
    27121 ctcaaacgct tgctgcgggt ggatgatccc tgcgatgtct tcggtgtgca cggcgtttgt
    27181 ggcattgtcg gctgtatcat gaccgggatt tttgccgcca gctcgctggg cggcgtgggc
    27241 ttcgctgaag gtgtgacgat gggtcatcag ttgctggtac agctggaaag catcgccatt
    27301 acgatcgtct ggtccggtgt ggtggcattt atcggctaca aattggcgga tctgacggtt
    27361 ggtctgcgtg taccggaaga gcaggagcga gaagggctgg atgtcaacag tcacggcgag
    27421 aatgcctata acgcgtaaca agcactgcaa aaaacagccg gacggttttc acctccggct
    27481 atttttttaa ttgtgattac gcatcacccc ttcctgaacg gtcgaggcaa ccagtacgcc
    27541 gtcctgggta taaaactcac cgcgcacaaa gccacgtgcg ctggacgccg aggtgctctc
    27601 cacgctatac agcagccatt cattcaaatt aaacgggcga tggaaccaca tggaatggtc
    27661 aatggtggca atctgaatcc ccggttcgag aaaaccgatg ccgtgcggct gtagagctac
    27721 cggcaggaag ttaagatcag aagcgtaacc gagaagatac tgatgaacgc gcaggtcatc
    27781 cggtacgcta ccatttgcgc ggatccacac ctgacgatgt ggttctgcga cgtgaccttt
    27841 cagtgggtta tgaaactcca ccggacggac ttctagcgga cgatcgcaga tgaatttatc
    27901 tttaagcact ggcggcagca ggtgcgccag cgattgggcg atttgcgttt ccgaaggcag
    27961 gccatcaggc gctggcgcgg acggcattgt tttttgatgt tcgaaacccg cttctggtgc
    28021 ctggaaagag gccgtcatat aaaaaatcgg tttgccgttt tgaatagcag caacccggcg
    28081 ggcgctgaag ctgttaccgt cacgcagcgt ttcgacatca taaataatcg gcttcttact
    28141 atcgccaggg cgaagaaagt agctgtgaaa cgaatgtacc agccgctctt cagggacggt
    28201 ctcttttgca gcatacaagg cctgacccac gacctgaccg ccaaatacct ggcgtaaacc
    28261 taaatcttca ctctggcctc gaaagagtcc ttcctcaatt ttttccagat ttaacaatgt
    28321 cagtaaattt tttagcgcct gactcatata actctccagt aacaaagctg ccgcagcaag
    28381 ccaaagtgag ttgagtataa cgcaaatttg ccactggtcc gatgggtgca atggtctgaa
    28441 ttacgggcta attacaggct aattacaggc agaaatgcgt gatgtgtgcc acacttgttg
    28501 acgttactat tttgttaacc actcttccgg cgaggaaagt tagcccgctg gtgcattgat
    28561 aataaggaga aatgaatgaa actcgtgcac atggccagtg gtttagcggt tgcgattgcg
    28621 ttggcggctt gcgcagataa aagcgcggat attcagacgc cagccccggc tgcaaatacg
    28681 tctatttcag caacacaaca acctgctatc cagcaaccga atgtctccgg taccgtctgg
    28741 atccgtcaga aagtcgcact gccgcctgat gctgtgctga ccgtgacact ttctgacgcg
    28801 tcgttagccg atgcaccgtc aaaagtgctg gcgcagaaag cggtgcgtac cgaaggtaaa
    28861 cagtcaccat tcagctttgt tctgccattt aacccggcag atgttcagcc gaacgcgcgt
    28921 attctgttga gtgcggcgat taccgtgaat gacaaactgg tatttattac cgataccgtt
    28981 cagccggtga tcaacaaggg cggaactaaa gccgacctga cattggtgcc ggtgcagcaa
    29041 accgccgtgc cggttcaggc cagcggtggt gcaacgacta ccgtaccttc gacttcacca
    29101 actcaggtga atccgtcttc ggcagttcca gctcctacgc aatattaagc gacgttaacc
    29161 ctctccgccc g
//
LOCUS       DAJVTL010000049        28795 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.049, whole genome shotgun sequence.
ACCESSION   DAJVTL010000049 DAJVTL010000000
VERSION     DAJVTL010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28795
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.049"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            175..933
                     /gene="ispU"
                     /locus_tag="OQQ26_002001"
                     /gene_synonym="uppS"
     CDS             175..933
                     /gene="ispU"
                     /locus_tag="OQQ26_002001"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HCS1857463.1"
                     /translation="MLFATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK
                     VQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDV
                     LWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
     gene            946..1803
                     /gene="cdsA"
                     /locus_tag="OQQ26_002002"
     CDS             946..1803
                     /gene="cdsA"
                     /locus_tag="OQQ26_002002"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414717.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HCS1857464.1"
                     /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG
                     QLSGFTTRSQRVWLAVLCGVLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVALLL
                     VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWADLDVAPV
                     TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            1815..3167
                     /gene="rseP"
                     /locus_tag="OQQ26_002003"
     CDS             1815..3167
                     /gene="rseP"
                     /locus_tag="OQQ26_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HCS1857465.1"
                     /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVAPELRHHAFNNKSVGQRAAIIA
                     AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP
                     DWDAVRLQLVDKIGDESTTITVAPFGSDQQRDVKLDLRHWAFEPDKEDPVSSLGIRPR
                     GPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
                     ERQGSPLSLTLILESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
                     WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
                     INLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            3197..5629
                     /gene="bamA"
                     /locus_tag="OQQ26_002004"
     CDS             3197..5629
                     /gene="bamA"
                     /locus_tag="OQQ26_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HCS1857466.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
                     KSVKDDILKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
                     LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
                     YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
                     TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
                     HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
                     DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
                     MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
                     AEQFQFNIGKTW"
     gene            5751..6236
                     /gene="skp"
                     /locus_tag="OQQ26_002005"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             5751..6236
                     /gene="skp"
                     /locus_tag="OQQ26_002005"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HCS1857467.1"
                     /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
                     TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
                     QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
                     K"
     gene            6240..7265
                     /gene="lpxD"
                     /locus_tag="OQQ26_002006"
     CDS             6240..7265
                     /gene="lpxD"
                     /locus_tag="OQQ26_002006"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HCS1857468.1"
                     /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQSAQNIAP
                     SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
                     YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
                     ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
                     RKVNQQD"
     gene            7370..7825
                     /gene="fabZ"
                     /locus_tag="OQQ26_002007"
     CDS             7370..7825
                     /gene="fabZ"
                     /locus_tag="OQQ26_002007"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HCS1857469.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            7829..8617
                     /gene="lpxA"
                     /locus_tag="OQQ26_002008"
     CDS             7829..8617
                     /gene="lpxA"
                     /locus_tag="OQQ26_002008"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HCS1857470.1"
                     /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL
                     KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
                     YKLIYRSGKTLDEVKPEIAELAETYSEVKAFTDFFARSTRGLIR"
     gene            8617..9765
                     /gene="lpxB"
                     /locus_tag="OQQ26_002009"
     CDS             8617..9765
                     /gene="lpxB"
                     /locus_tag="OQQ26_002009"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706127.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HCS1857471.1"
                     /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
                     CRFIGHTMADAMPLDPDKNGARDVLGIPYDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLASG
                     TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
                     QKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
     gene            9762..10358
                     /gene="rnhB"
                     /locus_tag="OQQ26_002010"
     CDS             9762..10358
                     /gene="rnhB"
                     /locus_tag="OQQ26_002010"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HCS1857472.1"
                     /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
                     DSKKLSEKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS"
     gene            10395..13877
                     /gene="dnaE"
                     /locus_tag="OQQ26_002011"
     CDS             10395..13877
                     /gene="dnaE"
                     /locus_tag="OQQ26_002011"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HCS1857473.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAVNNTGYQNLTLLIS
                     KAYQRGYGPAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
                     HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMSTEDYLVKSAKEGLEERLAFLFPDEEERVKRRPEYDERLETELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGNALKAADQHAK
                     AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
                     IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
                     FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISL
                     TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
                     RGLIGSEQVELEFD"
     gene            13890..14849
                     /gene="accA"
                     /locus_tag="OQQ26_002012"
     CDS             13890..14849
                     /gene="accA"
                     /locus_tag="OQQ26_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HCS1857474.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
                     MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDFIIPEPLGGAH
                     RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
     gene            14948..17089
                     /gene="ldcC"
                     /locus_tag="OQQ26_002013"
     CDS             14948..17089
                     /gene="ldcC"
                     /locus_tag="OQQ26_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
                     /protein_id="HCS1857475.1"
                     /translation="MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLK
                     FIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWF
                     FEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQK
                     SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTN
                     GTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIP
                     RREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWG
                     PYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEA
                     FMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWF
                     FDIWQPPQVDEAEYWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG
                     IPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRI
                     KNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAW
                     QRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSV
                     GQHYPGFETDIHGAKQDEDGVYRVRVLKMAG"
     gene            17146..17535
                     /locus_tag="OQQ26_002014"
     CDS             17146..17535
                     /locus_tag="OQQ26_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCS1857476.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW
                     KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEA
                     IRVDPYTQKRFTFFNDPDGLPLELYEQ"
     gene            17600..18898
                     /gene="tilS"
                     /locus_tag="OQQ26_002015"
     CDS             17600..18898
                     /gene="tilS"
                     /locus_tag="OQQ26_002015"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HCS1857477.1"
                     /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
                     RAIHVHHGLSANADAWVRHCENICQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
                     RTLLLGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMGEVSEFAGTRLIRPLLARTR
                     GELAQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAETTARSAALCAE
                     QESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV
                     RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSENIVPWQTWLQPLELPA
                     GLGSVQLNAGGAIRPPRADEAVSVRFKAPGLLHIVGRNGGRKLKKIWQELGVPPWLRD
                     TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
     gene            complement(18947..19207)
                     /gene="rof"
                     /locus_tag="OQQ26_002016"
     CDS             complement(18947..19207)
                     /gene="rof"
                     /locus_tag="OQQ26_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HCS1857478.1"
                     /translation="MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
                     LASRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVNES"
     gene            complement(19194..19394)
                     /locus_tag="OQQ26_002017"
     CDS             complement(19194..19394)
                     /locus_tag="OQQ26_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HCS1857479.1"
                     /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS
                     EAVREKAAYAAANLLVSDYVNE"
     gene            19560..20104
                     /locus_tag="OQQ26_002018"
                     /pseudo
     CDS             19560..20104
                     /locus_tag="OQQ26_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414732.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
     gene            20101..20523
                     /gene="arfB"
                     /locus_tag="OQQ26_002019"
     CDS             20101..20523
                     /gene="arfB"
                     /locus_tag="OQQ26_002019"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HCS1857480.1"
                     /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR
                     ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQ
                     KARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE"
     gene            20537..21247
                     /gene="nlpE"
                     /locus_tag="OQQ26_002020"
                     /gene_synonym="cutF"
     CDS             20537..21247
                     /gene="nlpE"
                     /locus_tag="OQQ26_002020"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308221.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HCS1857481.1"
                     /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
                     SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
                     TFTDCVTGKRFMVANNAELERGYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
                     PDTAGKFYPNQDCSSLGQ"
     gene            complement(21402..22226)
                     /locus_tag="OQQ26_002021"
     CDS             complement(21402..22226)
                     /locus_tag="OQQ26_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeF family permuted papain-like enzyme"
                     /protein_id="HCS1857482.1"
                     /translation="MDKPKAYCRLFLPSFLLLSACTVDISQPDSSATAVDAEAKTWAV
                     KFQHQSSFTEQSIKEITAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNN
                     VAEATGAGVQIVSLKKAMKHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIV
                     EFIPFMVTRQMCSLNPFSEDFRQQCVSGLAKAQLSSVGEGDKKSWFCSEFVTDAFAKA
                     GHPLTLAQSGWISPADLMHMRTGDVSAFKPETQLQYVGHLKPGIYIKAGRFVGLTQ"
     gene            complement(22280..23998)
                     /gene="proS"
                     /locus_tag="OQQ26_002022"
     CDS             complement(22280..23998)
                     /gene="proS"
                     /locus_tag="OQQ26_002022"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HCS1857483.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
                     DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
                     PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEIADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
                     VKQIKG"
     gene            complement(24109..24816)
                     /gene="tsaA"
                     /locus_tag="OQQ26_002023"
     CDS             complement(24109..24816)
                     /gene="tsaA"
                     /locus_tag="OQQ26_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HCS1857484.1"
                     /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ
                     ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPVAE
                     MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNV
                     RWRVTDAGFEVFALEPR"
     gene            complement(24813..25217)
                     /gene="rcsF"
                     /locus_tag="OQQ26_002024"
     CDS             complement(24813..25217)
                     /gene="rcsF"
                     /locus_tag="OQQ26_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HCS1857485.1"
                     /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
                     RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN
                     AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
     gene            complement(25335..26150)
                     /gene="metQ"
                     /locus_tag="OQQ26_002025"
     CDS             complement(25335..26150)
                     /gene="metQ"
                     /locus_tag="OQQ26_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HCS1857486.1"
                     /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
                     LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(26190..26843)
                     /gene="metI"
                     /locus_tag="OQQ26_002026"
     CDS             complement(26190..26843)
                     /gene="metI"
                     /locus_tag="OQQ26_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HCS1857487.1"
                     /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
                     FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNAMVMNTVLVLLVILVYLIQFAGDRIVRAVTRK"
     gene            complement(26836..27867)
                     /gene="metN"
                     /locus_tag="OQQ26_002027"
     CDS             complement(26836..27867)
                     /gene="metN"
                     /locus_tag="OQQ26_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HCS1857488.1"
                     /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
                     VKVEVLGYV"
     gene            28055..28615
                     /gene="gmhB"
                     /locus_tag="OQQ26_002028"
     CDS             28055..28615
                     /gene="gmhB"
                     /locus_tag="OQQ26_002028"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HCS1857489.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
                     MGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
                     FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAATAANVGTKVLVRTGKP
                     VTPEAENAADWVLNSLADLPQAIKKQ"
BASE COUNT         6899 a         7066 c         7926 g         6904 t
ORIGIN      
        1 cagagagtcg cgctatttgt tagcgtaggg cttcagtgat atagtctgcg ccatctgatc
       61 gtaattagtt ggctttataa ggtcaggtat gccgtggttt tacacggctt ttttttgtat
      121 aggcttcagt attcctgagt accgtaaacc ctgtcaggga ataaaaaacg cgtgatgttg
      181 tttgctactc aaccacttag cgaaaaattg ccagcgcatg gctgccgtca tgttgcgatc
      241 attatggacg gcaatggtcg ctgggcaaaa aagcaaggga agattcgtgc ctttgggcat
      301 aaagccgggg caaaatccgt ccgccgggct gtctcttttg cggccaacaa cggtattgag
      361 gcgttaacgc tgtatgcctt tagtagtgaa aactggaacc gaccagcgca ggaagtcagt
      421 gcgttaatgg aactgtttgt gtgggcgctc gatagcgaag taaaaagtct gcaccgacat
      481 aacgtgcgtc tgcgtattat tggcgatacc agtcgcttta actcgcgttt gcaagaacgt
      541 attcgtaaat ctgaagcgct aacagccggg aataccggtc tgacgctgaa tattgcggcg
      601 aactacggtg gacgttggga tatagtccag ggagtcaggc aactggctga aaaggtgcag
      661 caaggaaacc tgcaaccaga tcagatagat gaagagatgc taaaccagca tgtctgtatg
      721 catgaattgg cccctgtaga tttagtaatt aggactgggg gggagcatcg cattagtaac
      781 tttttgcttt ggcaaattgc ctatgccgaa ctttacttta cagatgttct ctggcccgat
      841 ttcgatgaac aagactttga aggggcgtta aatgcctttg ctaatcgaga gcgtcgtttc
      901 ggcggcaccg agcccggtga tgaaacagcc tgatgggggt cgcttttgct gaagtatcgc
      961 ctgatatctg cttttgtgtt aatacccgtc gtcatcgcgg cgttgtttct gttgccgccg
     1021 gtggggttcg ccattgtaac gctggtggtc tgcatgctgg cagcgtggga atggggacag
     1081 cttagcggtt ttaccactcg ttcgcagcga gtatggttgg cggtgttatg cggggtattg
     1141 ttggcgctga tgctttttct gttgccggaa tatcaccgaa atattcatca accgctggtt
     1201 gaaatctcac tttgggcttc gttgggttgg tggattgtcg cgctattgct ggtgctgttt
     1261 tacccaggtt ccgcagcaat ctggcgtaac tctaaaacat tgcgccttat ttttggcgtg
     1321 ctaaccattg ttcccttctt ctggggcatg ctggcgttac gggcctggca ctatgacgag
     1381 aatcattaca gtggcgcaat atggctgctc tatgtcatga tcctggtatg gggcgctgac
     1441 tccggcgcat atatgtttgg caaattgttt ggtaaacata agctggcacc gaaggtttct
     1501 ccgggtaaaa cctggcaagg ctttataggt ggactcgcta ctgcagcggt aatctcatgg
     1561 ggttatggca tgtgggcgga tctcgacgtc gctcccgtca ccttactcat ttgctctatt
     1621 gtcgcagcgt tagcctcagt gctcggcgat ctgaccgaga gtatgtttaa gcgtgaagca
     1681 ggaattaagg acagcggtca tttaattcca ggacacggtg gtattttaga tcgtattgat
     1741 agcctgacgg ctgcggtacc ggtctttgct tgcttgttgt tactggtatt caggacgctt
     1801 taacggaagg taatatgctg agttttctct gggatttggc ttcgttcatc gttgcactgg
     1861 gtgtacttat caccgtgcat gaatttggtc atttctgggt tgcccggcgt tgtggtgttc
     1921 gcgttgagcg tttctcaata gggtttggta aggcgctctg gcggcgaact gataagctcg
     1981 gcaccgaata tgttatcgcc ctgatcccgt tgggcggtta tgtcaaaatg ctggatgagc
     2041 gcgcagaacc ggtcgctccg gaactccgcc accatgcctt caataataaa tctgtcggcc
     2101 aacgagcggc gattattgcc gcaggtccgg ttgcaaactt catttttgct atctttgcct
     2161 actggctggt ttttattatt ggtgtgcctg gcgtacgtcc ggtggttggc gaaatagcag
     2221 ccaattcgat agctgcggaa gcacaaattg caccaggtac ggaactaaaa gccgtagatg
     2281 gtatcgaaac gcctgattgg gatgccgtgc gtttgcagtt ggtcgataaa attggcgatg
     2341 aaagcaccac cattacagta gcgccatttg gcagcgacca acagcgggat gtaaagctcg
     2401 atttacgtca ctgggcgttt gagcctgata aagaagatcc ggtatcttcg ctggggattc
     2461 gtcctcgtgg gccgcaaatt gaacctgtac tggaaaatgt gcaaccaaac tcggcggcaa
     2521 gcaaggctgg tttgcaagca ggcgacagga tcgttaaagt cgatggtcag cccttaacgc
     2581 agtgggtgac ctttgtgatg cttgtccggg ataacccggg taaatcctta gcgttagaaa
     2641 tcgaaaggca gggaagtccc ttgtctttga cattaatcct ggagagtaaa ccgggtaatg
     2701 gtaaagcgat tggttttgtc ggtattgagc cgaaagtcat tcctttgcca gatgagtata
     2761 aagttgtacg ccagtatggg ccgttcaacg ccattgtcga agccacggac aaaacgtggc
     2821 agctgatgaa gctgacggtc agtatgctgg gaaaattgat caccggtgat gtgaaactga
     2881 acaacctcag tgggccgatc tctatcgcca agggggctgg gatgacagcg gaactcgggg
     2941 ttgtttatta cctgccgttt cttgcgctta ttagcgtgaa cttagggata attaacctgt
     3001 ttccgttgcc cgtacttgac ggggggcatc tgctgttcct tgcgatcgaa aagatcaagg
     3061 gcggaccggt atccgagcgg gttcaagact tttgttatcg cattggctcg attttgctgg
     3121 tgctgttaat ggggcttgca cttttcaatg atttctctcg gttatgagag ttagttagga
     3181 agaacgcata ataacgatgg cgatgaaaaa gttactcata gcgtcgctgc tgtttagcag
     3241 cgccaccgta tacggtgctg aagggttcgt agtgaaagat attcatttcg aaggccttca
     3301 gcgtgtcgcc gttggtgcgg ccctcctcag tatgccggtg cgcacaggcg acacggttaa
     3361 tgatgaagat atcagtaata ccattcgcgc tctgtttgct accggcaact ttgaggatgt
     3421 tcgcgtcctt cgtgatggtg atacccttct ggttcaggta aaagaacgtc cgaccattgc
     3481 cagcattact ttctccggta acaaatcggt gaaagatgac atactgaagc aaaacctcga
     3541 ggcttctggc gtgcgtgtgg gcgaatccct cgatcgcacc accattgccg atatcgagaa
     3601 aggtctggaa gacttctact acagcgtcgg taaatatagc gccagcgtta aagctgtcgt
     3661 gaccccgctg ccgcgcaacc gtgttgacct aaaactggtg ttccaggaag gtgtgtcagc
     3721 tgaaatccag caaattaaca ttgttggtaa ccatgctttc accaccgacg aactgatctc
     3781 tcatttccaa ctgcgtgacg aagtgccgtg gtggaacgtg gtaggcgatc gtaaatacca
     3841 gaaacagaaa ctggcgggcg accttgaaac cttgcgcagt tactatctgg atcgcggtta
     3901 tgcccgtttc aacatcgact ctacccaggt cagtctgacg ccagataaaa aaggtattta
     3961 cgtcacggtg aacatcaccg aaggcgatca gtacaagctt tctggcgttg aagtgagcgg
     4021 caaccttgcc gggcactccg ctgaaattga gcaactgact aagatcgagc cgggtgagct
     4081 gtataacggc accaaagtga ccaagatgga agatgacatt aaaaagcttc tcggtcgcta
     4141 tggttatgcc tatccgcgcg tacagtcgat gcccgaaatt aacgatgccg acaaaaccgt
     4201 taaattacgc gtgaacgttg atgcgggtaa ccgtttctac gtgcgtaaga tccgttttga
     4261 aggtaacgat acctcgaaag atgccgtcct gcgtcgcgaa atgcgtcaga tggaaggtgc
     4321 atggctgggg agcgatctgg tcgatcaggg taaggagcgt ctgaatcgtc tgggcttctt
     4381 tgaaactgtc gatacagata cccaacgtgt tccgggtagc ccggaccagg ttgatgtagt
     4441 ctacaaggtg aaagaacgta acactggtag cttcaacttc gggattggtt acggtactga
     4501 aagtggcgtg agcttccagg ctggcgtgca acaggataac tggttaggta caggttatgc
     4561 tgttggtatc aacgggacca aaaacgatta ccagacctat gctgaactgt cggtaaccaa
     4621 cccgtacttc accgtagatg gcgtaagcct cggtggtcgt ctcttctata atgacttcca
     4681 ggcagatgac gccgacctgt ccgactatac taacaagagt tatggtacag acgtgacgtt
     4741 gggcttcccg attaacgaat ataactcgct gcgtgcaggt ctgggttatg tacataactc
     4801 cctgtccaac atgcagcctc aggttgcgat gtggcgttat ctgtactcta tgggtgaaca
     4861 tccgagcacc tctgatcagg ataacagctt caaaacggac gacttcacgt tcaactatgg
     4921 ttggacctat aacaagcttg accgtggtta cttcccgaca gatggttcac gtgtcaacct
     4981 gaccggtaaa gtgaccattc ctggatcgga taacgaatac tacaaagtga cgttagacac
     5041 ggcgacttat gtgccgatcg atgacgatca caaatgggtt gttctggggc gtacccgctg
     5101 gggttatggt gatggtttag gcggcaaaga gatgccgttc tacgagaact tctatgccgg
     5161 tggttccagc accgtgcgtg gcttccagtc caataccatt ggtccgaaag cagtttactt
     5221 cccgcatcag gccagtaatt atgatccgga ctatgattac gaatgtgcga ctcaggacgg
     5281 cgcgaaagac ctgtgtaaat cggatgatgc tgtaggcggt aacgccatgg cggttgccag
     5341 cctcgagttc atcaccccga cgccgtttat tagcgataag tatgctaact cggttcgtac
     5401 ttcattcttc tgggatatgg gtaccgtttg ggatacaaac tgggattcca gccaatattc
     5461 tggatatccg gactatagtg atccaagcaa tatccgtatg tctgcgggta tcgcattaca
     5521 atggatgtcc ccattggggc cgttggtgtt ctcctacgcc cagccgttca aaaagtacga
     5581 tggagacaag gcagaacagt tccagtttaa catcggtaaa acctggtaag tgttctccac
     5641 aaaggaatgt agtggtagtg tagcgatgac tttaggcgat caatataaga tcgccgggcc
     5701 acgcaaagaa ctgcaccctc cggtgcaaat gggatggtaa ggagtttatt gtgaaaaagt
     5761 ggttattagc tgcaggtctt ggtttagcac tggcaacttc tgctcaggcg gctgacaaaa
     5821 ttgcaatcgt caatatgggc agcctgttcc agcaggtagc gcagaaaacc ggtgtttcta
     5881 acacgctgga aaatgagttc aaaggccgtg ccagcgaact gcagcgtatg gaaaccgatc
     5941 tgcaggctaa aatgaaaaag ctgcagtcca tgaaagcggg cagcgatcgc actaagctgg
     6001 aaaaagacgt gatggctcag cgccagactt ttgctcagaa agcgcaggct tttgagcagg
     6061 atcgcgcacg tcgttccaac gaagaacgcg gcaaactggt tactcgtatc cagactgctg
     6121 tgaaatccgt tgccaacagc caggatatcg atctggttgt tgatgcaaac gccgttgctt
     6181 acaacagcag cgatgtaaaa gacatcactg ccgacgtact gaaacaggtt aaataagtaa
     6241 tgccttcaat tcgactggct gatttagcgc agcagttgga tgcagaacta cacggtgatg
     6301 gcgatatcgt catcaccggc gttgcgtcca tgcaatctgc acaaacaggt cacattacgt
     6361 tcatggttaa cccaaaatac cgtgagcatt taggcttgtg ccaggcgtcc gcggttgtca
     6421 tgacccagga cgatcttcct ttcgcgaaaa gtgccgcgct ggtagtgaag aatccctacc
     6481 tgacttacgc gcgcatggcg caaattttag ataccacgcc gcagtccgcg cagaacattg
     6541 cacccagtgc ggtgatcgac gcgacggcga agctgggtaa caacgtatcg attggcgcta
     6601 acgcggtgat tgagtccggc gttgaactgg gcgataacgt gattatcggt gccggttgct
     6661 tcgtaggtaa aaacagcaaa atcggtgcag gttcgcgtct ctgggcgaac gtaaccattt
     6721 accatgagat ccagatcggt cagaattgcc tgatccagtc cggaacagtg gtaggcgcag
     6781 acggctttgg ttatgccaac gatcgtggta actgggtgaa gatcccacag attggtcgcg
     6841 taattattgg cgatcgcgtg gagatcggtg cctgcacaac catcgatcgc ggcgcgctgg
     6901 atgacactgt tattggcaat ggcgtgatca ttgataacca gtgccagatt gcacataacg
     6961 tcgtgattgg cgacaatacg gcggttgccg gtggcgtcat tatggcgggc agcctgaaaa
     7021 ttggtcgtta ctgcatgatc ggcggagcca gcgtaatcaa cgggcatatg gaaatatgcg
     7081 acaaagtgac ggttacgggc atgggtatgg tgatgcgtcc catcactgaa ccaggcgtct
     7141 attcctcagg cattccgctg caacccaaca aagtctggcg caaaaccgct gcactggtga
     7201 tgaacattga tgacatgagc aagcgtctga aatcgcttga gcgcaaggtt aatcaacaag
     7261 actaacgttc catcttttgt tcgccaaact ttacggcctg tctcattctt acgattgcgg
     7321 caggccgtgt tattattgtc gtttcttata ttttgacagg aagagtatct tgactactaa
     7381 cactcatact ctgcagattg aagagatttt agaacttctg ccgcaccgtt tcccgttctt
     7441 actggtggat cgcgtgctgg attttgaaga aggtcgtttt ctgcgcgcag taaaaaatgt
     7501 ctctgtcaat gagccattct tccagggcca tttccctggg aaaccgattt tcccgggtgt
     7561 gctgattctg gaagcaatgg cacaggcaac aggtattctg gcgtttaaaa gcgtaggaaa
     7621 actggaaccg ggtgagctgt actacttcgc cggtattgac gaagcgcgct tcaagcgccc
     7681 ggtcgtgcct ggcgatcaaa tgatcatgga agtcactttc gaaaaaacgc gccgcggcct
     7741 gacccgtttt aaaggggttg ctctggtcga cggtaaagta gtttgcgaag caacgatgat
     7801 gtgtgctcgt agccgggagg cctgatacgt gattgataaa tccgcctttg tgcatccaac
     7861 cgccattgtg gaagagggcg cgtcgattgg cgcgaacgca cacattggtc ctttttgtat
     7921 cgttggaccc catgtcgaaa ttggtgaggg taccgtactg aaatctcacg ttgtcgtgaa
     7981 tggtcatact aaaattggcc gtgataatga gatttatcag ttcgcctcca tcggcgaagt
     8041 taaccaggat ctgaaatatg ctggcgaacc gacccgtgtg gaaatcggcg atcgtaaccg
     8101 cattcgcgaa agcgtcacca ttcatcgtgg cacagtccag ggcggtggat tgacgaaggt
     8161 gggcagcgac aacttactga tgatcaacgc gcacattgcg cacgattgta cggtaggtaa
     8221 ccgctgtatt ctcgccaaca acgcaacgct ggcgggtcac gtatcggttg acgacttcgc
     8281 gatcatcggc ggcatgaccg cagtccatca gttctgcatc attggtgcgc atgtgatggt
     8341 tggcggctgc tccggtgtgg cgcaggacgt ccctccttat gtcattgcgc agggtaacca
     8401 cgcaacgccg ttcggtgtca atatcgaagg gctgaagcgc cgcggattca gccgtgaggc
     8461 gattaccgct atccgcaatg cgtataagct gatttatcgt agcggtaaaa cgctcgatga
     8521 agtgaaaccg gaaattgctg aactggcgga aacatattcg gaagtgaaag cctttaccga
     8581 tttctttgca cgctcaacgc gcggtctgat tcgttaatga ctgaacagcg tccattaacg
     8641 attgccctgg tcgccggaga aacctccggc gatatcctgg gggccggctt aatccgcgct
     8701 ctgaaagaac gtgtgcccaa cgcccgcttt gttggtgttg ccgggccacg aatgcaggct
     8761 gaaggctgcg aagcctggta cgaaatggaa gaactggcgg tgatgggcat tgttgaagtg
     8821 ctcggtcgtc tgcgtcgttt actgcatatt cgtgccgatc tgacaaagcg ttttggcgaa
     8881 ctgaagccag atgtttttgt cggtattgat gcgcctgact tcaatattac tcttgaaggt
     8941 aacctcaaaa agcagggtat caaaaccatt cattacgtca gtccatccgt ctgggcgtgg
     9001 cgacagaaac gcgttttcaa aataggcaga gccaccgatc tggtgctcgc atttctgcct
     9061 ttcgaaaaag cgttttatga caaatacaat gtaccgtgcc gctttatcgg tcatactatg
     9121 gctgatgcca tgccgttaga tccagataaa aatggtgccc gtgatgtgct ggggatccct
     9181 tacgatgccc actgtctggc tttgttgccg ggcagccgtg gtgcagaagt cgaaatgctt
     9241 agtgctgatt tcctgaaaac ggctcagctt ttgcgccaga catatccgga tctcgaaatc
     9301 gtggtgccac tggtgaatgc caaacgccgc gagcagtttg aacgcatcaa agctgaagtc
     9361 gcgccagacc tgtcggttca tttgctggat ggaatgggcc gtgaggcgat ggtcgccagc
     9421 gatgcggcac tactggcgtc ggggacggca gccctggagt gtatgctggc gaaatgcccg
     9481 atggtggtgg gatatcgcat gaagcctttt accttctggt tggcgaagcg gctggtgaaa
     9541 actgattatg tctcgctgcc aaatctgctg gcgggcagag agttagtcaa agagttattg
     9601 caggaagagt gtgagccgca aaaactggct gcggcgctgt taccgctgtt ggcgaacggg
     9661 aaaaccagcc acgcgatgca cgataccttc cgtgaactgc atcagcagat ccgctgtaat
     9721 gccgatgagc aggcggcaca agccgttctg gagttagcac aatgatcgaa tttgtttatc
     9781 cgcacacgca gctggttgcg ggtgtggatg aagtcggacg cgggccgtta gttggcgcgg
     9841 tcgtcaccgc tgcggtgatc cttgacccgg cgcgcccgat tgccgggctg aatgattcca
     9901 aaaagctgag cgaaaaacgc cgtctggcgc tctgcgaaga gatcaaagag aaagcgttga
     9961 gctggagtct gggccgcgcg gaaccccacg aaatcgacga gctgaacatt cttcatgcga
    10021 ccatgctggc gatgcagcgt gccgtcgctg ggctgcatat tgcgccggaa tatgtgttga
    10081 ttgatggtaa ccgctgcccg aaattaccga tgcctgcgat ggctgtggtg aaaggcgata
    10141 gccgcgtacc ggaaatcagt gccgcgtcta tactggcgaa agtgacgcgt gacgccgaaa
    10201 tggcggcgct ggatattgtt ttcccgcaat atggttttgc ccaacacaaa gggtacccaa
    10261 ccgcttttca tctggaaaaa ctggctgaac acggcgcgac cgaacaccat cggcgcagct
    10321 ttgggcctgt caaacgcgca ctgggacttg cgtcctgatt cttgtgtcga gattaagtaa
    10381 accggaatct gaagatgtct gaaccacgtt tcgtacacct gcgggtgcac agcgactact
    10441 cgatgatcga tggcctggcc aaaaccgcac cgttggtaaa aaaggcggcg gcgttgggta
    10501 tgccagcact ggcgatcacc gatttcacca acctttgtgg tctggtgaag ttctacggag
    10561 cgggacatgg cgcagggatt aagcctatcg tcggggcaga ttttaacgtc cagtgcgacc
    10621 tgctgggtga tgagttaacc cacctgacgg tactggcggt gaacaatacc ggctatcaga
    10681 atctgacgtt gctgatctca aaagcgtatc agcgcgggta cggccccgct gggccgatca
    10741 tcgatcgcga ctggcttatc gaattaaatg aagggttgat ccttctttcc ggcgggcgca
    10801 tgggcgacgt cggacgcagt cttttgcgtg gtaacagcgc gctggtagat gagtgtgtcg
    10861 cgttttatga agaacacttc ccggatcgct attttctcga gctgatccgc accggcaggc
    10921 cggatgaaga aagctatctg cacgcggcgg tggaactggc ggaagcgcgc ggtttgcccg
    10981 tcgtggcgac taacgatgtg cgctttatcg acagcagcga ctttgacgca cacgaaatcc
    11041 gcgtcgcgat ccacgacggc tttaccctcg acgatcctaa acgcccgcgt aactattcgc
    11101 cgcagcaata tatgcgtagc gaagaggaga tgtgtgagct gtttgccgac atccccgaag
    11161 cccttgccaa caccgttgag atcgccaaac gctgtaacgt aaccgtgcgt cttggtgaat
    11221 acttcctgcc gcagttcccg accggggaca tgagcaccga agattatctg gtcaagagtg
    11281 caaaagaggg cctggaagag cgtctggcct ttttattccc tgacgaggaa gaacgtgtta
    11341 agcgccgccc ggaatatgac gaacgtctgg agactgaact tcaggttatc aaccagatgg
    11401 gcttcccggg ctacttcctc atcgttatgg aatttatcca gtggtcgaaa gataacggcg
    11461 taccggtagg gccaggccga ggctccggtg cgggttcact agtggcctac gcgctgaaaa
    11521 tcaccgacct cgatccgctg gaatttgacc tgctgttcga acgtttcctt aacccggaac
    11581 gtgtctccat gcctgacttc gacgttgact tctgtatgga gaaacgcgat caggttatcg
    11641 agcacgtagc ggacatgtac ggtcgtgatg cggtatcgca gatcatcacc ttcggtacaa
    11701 tggcggcgaa agcggtgatc cgcgacgtag gccgcgtgct ggggcatccg tacggctttg
    11761 tcgatcgtat ctcgaaactg atcccgcccg atccggggat gacgctggcg aaagcgtttg
    11821 aagccgagcc gcagttgccg gaaatctacg aagcggatga agaagttaag gcgctgatcg
    11881 acatggcgcg caaactggaa ggggtcaccc gtaacgccgg taagcacgcc ggtggggtgg
    11941 ttatcgcgcc gaccaaaatt accgattttg cgccgcttta ttgcgatgaa gagggcaaac
    12001 atccggtcac ccagtttgat aaaagcgacg ttgaatacgc cggactggtg aagttcgact
    12061 tccttggttt gcgtacgctc accatcatca actgggcgct ggagatgatc aacaagcggc
    12121 gggcgaagaa tggcgagcca ccgctggata tcgccgcgat cccgctggat gacaagaaaa
    12181 gcttcgacat gctgcaacgc tcggaaacca cggcggtatt ccagcttgaa tcgcgcggca
    12241 tgaaggacct gatcaagcgt ctacaacctg actgcttcga agatatgatc gcactggtgg
    12301 cactgttccg ccctggtccg ttgcagtcag ggatggtgga taactttatc gaccgtaaac
    12361 atggtcgtga agagatctcc tatccggacg tgcagtggca gcatgaaagc ttgaaaccgg
    12421 tactggagcc aacctacggc atcatcctgt atcaggaaca ggtcatgcag attgcgcagg
    12481 tgctttctgg ttataccctc ggtggcgcgg atatgctgcg tcgtgcgatg ggtaagaaaa
    12541 agccggaaga gatggctaag cagcgttctg tatttgctga aggtgcagaa aagaacggaa
    12601 tcaacgccga actggcgatg aaaatcttcg acctggtgga gaaattcgct ggttacggat
    12661 ttaacaaatc gcactctgcg gcctatgctt tggtgtcata tcaaacatta tggctgaaag
    12721 cgcactatcc ggcagagttt atggcggcgg taatgactgc cgatatggac aacaccgaga
    12781 aggtggtggg cctggtggat gagtgctggc ggatggggct gaaaatcctg ccaccagata
    12841 taaactccgg tctttaccat ttccacgtca acgacgacgg cgaaatcgtg tatggtattg
    12901 gcgcgatcaa aggggtcggt gaaggtccga ttgaggccat catcgaagcc cgtaataaag
    12961 gcggctactt ccgcgaactg tttgatctct gcgctcgtac cgacaccaaa aagttgaacc
    13021 gtcgcgtgct ggaaaaactg atcatgtccg gggcgtttga ccgtcttggg ccacaccgcg
    13081 cagcgctgat gaactcgctg ggcaatgcgt taaaagcggc agatcaacac gcgaaagcgg
    13141 aagctatcgg tcaggccgat atgttcggcg tgctggccga agagccggaa caaattgaac
    13201 aatcctatgc cagctgccaa ccgtggccgg agcaggtggt attagatggg gaacgtgaaa
    13261 cgttaggcct gtacctgacc ggacacccta tcaaccagta tttaaaagag attgagcgtt
    13321 atgtcggagg cgtaaggctg aaagacatgc acccgacaga acgtggtaaa gtcatcacgg
    13381 ctgcggggct cgttgttgcc gcgcgggtta tggtcaccaa gcgcggcaat cgtatcggta
    13441 tctgcacgct ggatgaccgt tccgggcggc tggaagtgat gttgtttact gacgccctgg
    13501 ataaatacca gcaattgctg gaaaaagacc gcatacttat cgtcagcgga caggtcagct
    13561 ttgatgactt cagcggtggg cttaaaatga ccgctcgcga agtgatggat attgacgaag
    13621 cccgggaaaa atatgctcgc gggcttgcta tctcgctgac ggacaggcaa attgatgacc
    13681 agcttttaaa ccgactccgt cagtctctgg aaccccaccg ctctgggaca attccagtac
    13741 atctctacta tcagagggcg gatgcacgcg cgcggttgcg ttttggcgcg acgtggcgtg
    13801 tctctccgag cgatcgttta ttaaacgatc tccgtggcct cattggttcg gagcaggtgg
    13861 aactggagtt tgactaatac aggaatacta tgagtctgaa tttccttgat tttgaacagc
    13921 cgattgcaga gctggaagcg aaaatcgatt ctctgactgc ggttagccgt caggatgaga
    13981 aactggatat taacatcgat gaagaagtgc atcgtctgcg tgaaaaaagc gtagaactga
    14041 cgcgtaaaat cttcgccgat ctcggtgcat ggcagattgc gcaactggca cgccatccac
    14101 agcgtcctta taccctggat tacgttcgcc tggcatttga tgaatttgac gaactggctg
    14161 gcgaccgtgc gtatgcagac gataaagcta tcgtcggtgg tatcgcccgt ctcgatggtc
    14221 gtccggtgat gatcattggc catcaaaaag gtcgtgaaac caaagaaaaa attcgccgta
    14281 actttggtat gccagcgcca gaaggttacc gcaaagcact gcgtctgatg caaatggctg
    14341 aacgctttaa gatgcctatc atcaccttta tcgacacccc gggggcttat cctggcgtgg
    14401 gcgcagaaga gcgtggtcag tctgaagcca ttgcacgcaa cctgcgtgaa atgtctcgcc
    14461 tcggcgtacc ggtagtttgt acggttatcg gtgaaggtgg ttctggcggt gcgctggcga
    14521 ttggcgtggg cgataaagtg aatatgctgc aatacagcac ctattccgtt atctcgccgg
    14581 aaggttgtgc gtccattctg tggaagagcg ccgacaaagc gccgctggcg gctgaagcga
    14641 tgggtatcat cgctccgcgt ctgaaagagc tgaaactgat cgacttcatc atcccggaac
    14701 cgctgggcgg cgctcaccgt aacccggaag cgatggcggc atcgttgaaa gcgcaactgc
    14761 tggcggatct ggccgatctc gatgtgttaa gcactgaaga tttaaaaaat cgtcgttatc
    14821 agcgcctgat gagctacggt tacgcgtaat tcgcaaaagt tctgaaaaag ggtcacttcg
    14881 gtggcccttt tttatcgcca cggtttgagc aggctatgat taaggaagga ttttccaaga
    14941 ggaacacatg aacatcattg ccattatggg accgcatggc gtcttttata aagatgagcc
    15001 catcaaagaa ctggagtcgg cgctggtggc gcaaggcttt cagattatct ggccacaaaa
    15061 cagcgttgat ttgctgaaat ttatcgaaca taaccctcga atttgcggcg tgatttttga
    15121 ctgggatgag tacagtctcg atttatgcag cgatatcaat caacttaatg aatatctccc
    15181 gctttatgcc ttcatcaaca cccactcgac gatggatgtc agcgtgcagg atatgcggat
    15241 ggcgctctgg ttttttgaat atgcgctggg gcaggcggaa gatatcgcca ttcgtatgcg
    15301 tcagtacacc gacgaatatc ttgataacat tactccgccg ttcacgaaag ccttgtttac
    15361 ctacgtcaaa gagcggaagt acaccttttg tacgccgggg catatgggcg gcaccgcata
    15421 tcaaaaaagc ccggttggct gcctgtttta tgattttttc ggcgggaata ccctcaaggc
    15481 tgatgtctct atttcggtca ccgagcttgg ttcgttgctc gaccacaccg ggccacacct
    15541 ggaagcggaa gagtacatcg cgcggacttt tggcgcggaa cagagttata tcgttaccaa
    15601 cggaacatcg acgtcgaaca aaattgtggg tatgtacgcc gcgccatccg gcagtacgct
    15661 gttgatcgac cgcaattgtc ataaatcgct ggcgcatctg ttgatgatga acgatgtagt
    15721 gccagtctgg ctgaaaccga cgcgtaatgc gttggggatt cttggtggga tcccgcgccg
    15781 tgaatttact cgcgacagca tcgaagagaa agtcgctgcc accacgcagg cacaatggcc
    15841 ggttcatgcg gtgattacca actccaccta tgatggcttg ctctacaaca ccgactggat
    15901 caaacagacg ctggatgtcc cgtcgatcca cttcgattcc gcctgggggc cgtacaccca
    15961 ttttcatccg atctaccagg ggaaaagtgg tatgagcggc gagcgtgttg cgggaaaagt
    16021 gatcttcgaa acgcaatcga cccacaaaat gctggcggcg ttatcgcagg cttcgctgat
    16081 ccacattaaa ggcgagtatg acgaagaggc gtttaacgaa gcctttatga tgcataccac
    16141 cacctcgccc agttatccca ttgttgcttc ggttgagacg gcggcggcga tgctgcgtgg
    16201 taatccgggc aaacggctga ttaaccgttc ggtggagcgg gcgctgcatt ttcgcaaaga
    16261 ggtccagcgg ttgcgggaag agtctgacgg ttggtttttc gatatctggc aaccgccgca
    16321 ggtggatgaa gccgaatact ggcccgttgc gccaggcgaa cagtggcacg gctttaacga
    16381 tgcggatgcc gatcatatgt ttctcgatcc ggttaaagtc actattttga caccggggat
    16441 ggacgaacag ggcaatatga gcgaggaggg gatcccggcg gcgctggtgg caaaattcct
    16501 cgacgaacgt gggatcgtag tagagaaaac cggcccttat aacctgctgt ttctctttag
    16561 tattggtatc gataaaacca aagcaatggg attattgcgt gggttgacgg aatttaaacg
    16621 ctcttacgat ctcaacctgc ggatcaaaaa tatgctaccc gatctctatg ctgaagatcc
    16681 cgatttctac cgcaatatgc gtattcagga tctggcgcaa gggatccata agctgattcg
    16741 taaacacgat cttcccggtt tgatgttgcg ggcattcgat actttgccgg agatgatcat
    16801 gacgccacat caggcatggc agagacagat taaaggtgaa gtagaaacca ttgcgctgga
    16861 acaactggtc ggtagagtat cggcaaatat gatcctgcct tatccaccgg gcgtaccgct
    16921 gttgatgcct ggagaaatgc tgaccaaaga gagccgcaca gtactcgatt ttctactgat
    16981 gctttgttcc gtagggcaac attaccccgg ttttgaaacg gatattcacg gcgcgaaaca
    17041 ggacgaagac ggcgtttacc gcgtacgagt cctaaaaatg gcgggataac ttgccagagc
    17101 ggcttccggg cgagtaacgt gctgttaaca aataaaggag acgttatgct gggtttaaaa
    17161 caggttcacc atattgcgat tattgcgacg gattatgcgg tgagcaaagc tttctactgc
    17221 gatattcttg gtttcacgct gcaaagcgaa gtctatcgcg aagcgcgcga ctcgtggaaa
    17281 ggggatttgg cgcttaatgg gcaatatgtg attgagcttt tctcatttcc gttcccgccg
    17341 gagcgcccca gccgaccgga agcttgcggc ctgcgtcatc tggcttttag cgttgatgat
    17401 atcgatgcgg cagtggcgca ccttgaaagc cataacgtga agtgtgaagc catccgtgtc
    17461 gatccataca cgcaaaaacg cttcacgttc tttaacgatc cggacgggct gccgttggaa
    17521 ctgtatgagc agtaaggctt gtcatcgccg catttgcccg gtaacgtgcc gggcattgct
    17581 actgtaaaat cgcaccatca tgacactcac gctcaataga caacttctca cctcacgcca
    17641 gattctggtg gcctttagcg gcgggcttga ctccaccgtt ctgctgcatc agttggtgca
    17701 gtggcggacg gaaaatccgg gcgtcactct gcgcgctatc cacgtgcatc acggtttaag
    17761 tgccaatgcc gatgcctggg ttaggcattg cgagaacatc tgccaacagt ggcaggtgcc
    17821 gctggtggtc gaacgcgtac aacttgcgca agaggggctg gggattgagg cccaggcgcg
    17881 gcaggcgcgt tatcaggcat ttgcccgtac cctattgctc ggcgaagtgc tggtcactgc
    17941 gcaacatctc gacgatcaat gtgaaacctt tctgctggcg ctaaaacgcg gtagcggccc
    18001 tgccgggctt tcggctatgg gggaagtttc ggagtttgcc ggaacacggc ttatccgccc
    18061 gttgctcgcc cgcacgcggg gggaactggc gcagtgggca ttggcgcatg gtttacgctg
    18121 gattgaagac gaaagtaatc aggacgactc atacgatcgt aactttctgc gcctgcgcgt
    18181 agtgccgtta ttgcagcagc gttggccgca ttttgccgaa acaacggccc gcagcgccgc
    18241 actttgtgct gaacaagaga gcctgctgga tgaactgctg gcagatgatt tagcacactg
    18301 tcaatcgccg caggggacgc tgcagattgt gccaatgctg gcgatgagtg atgcccgccg
    18361 cgcggcgatt atccgccgct ggctggcagg gcagaatgca ccgatgcctt cccgcgacgc
    18421 gttggtgagg atctggcagg aagtggcgct ggcgcgggaa gatgcctccc cctgtttacg
    18481 tttgggcgcg tttgaaatcc gacgctatca gtcgcaactg tggtggatta aatccgtcac
    18541 cgggcaaagc gaaaacattg tgccgtggca gacgtggctt caaccgctgg aattaccggc
    18601 ggggctggga agtgtacagc ttaatgcggg aggtgctatt cgccctccgc gtgcagacga
    18661 agcggtcagc gtgcgtttca aagcgccagg attgctgcat attgtcgggc gtaacggcgg
    18721 acgtaagcta aagaaaatct ggcaagagct gggcgtgccg ccgtggctac gtgacaccac
    18781 gccactgctg ttttatggcg aaacgctgat tgcggcggca ggggtatttg tgacgcaaga
    18841 aggtgtggct gaaggtgaga atggcgtaag ttttgtctgg cagaaaacgc ttagttaagt
    18901 gaaagccgga taagacgcat caaacgtcgc atccggcgaa agtcaatcag gattcgttta
    18961 ccaccaccgt accgatttcc gggtggctaa agctggtaat tttatccaga cgcagctcgc
    19021 gggtttcgcc agcggcctcg acgaccagat actccacatt tttgcgggag gctaaatcac
    19081 tggcttttgc ctgcaatttt tcgccatctt tcagctcaag tgtcagcatt aaatgatgct
    19141 ggcaggcgag ctcaagatta tcgtaatcat cacaattgat tggttgatac gtatcattca
    19201 ttgacataat cgctcaccag taagtttgcc gcagcgtatg ctgctttttc cctgacagcc
    19261 tcagaaaggg cgtcgtcggc agccatttca ttcagcactt tcaaaacgca gcccagcgcg
    19321 tccggaacgt atcctaagtc tccgctggcg atttccgcgt accgcttgcg tattaactca
    19381 caatattttt ccacatgccc tcctgtcagc actctgactt aaccgtggat gcaagtctaa
    19441 gcctacgaag ataaactctg tttcgcaagg tgactatacc acactcattt ctgcaatatc
    19501 agcgccgcaa ctgcacgtat tccgttacaa tggcctcctg attcgaaagg agttttctta
    19561 tggcgcttaa agcgacaatt tataaagcga cggttaatgt ggccgatctc gaccgcaacc
    19621 agtttctcga tgcctctctg acgctggcgc gccatccttc agaaacccag gagcgtatga
    19681 tgctgcgctt gctggcgtgg ctgaaatatg ctgatgaacg tctgcaattt acccgtggtt
    19741 tgtgtgccga tgatgagccg gaagcgtggc tgcgtaacga tcacctgggc attgatttgt
    19801 ggattgagct gggctgccgg atgagcggcg gattaagaaa gcctgcaccc aggccgcaga
    19861 agtggcgctg tttacctata atagtcgggc ggcgcaaatc tggtggcagc aaaatcagag
    19921 caaatgtgtg cagtttgcca atctttccgt ctggtatctg gacgatgaac aactggcgaa
    19981 agtaagcgcc tttgccgatc gtaccatgac gctgcaggca acgattcagg atggcgtgat
    20041 ctggttatcg gatgataaga ataatctgga agtgaactta accgcctggc aacaaccttt
    20101 atgattgtga tttcccgaca tgttgctatt cccgatggtg agcttgagat caccgccatt
    20161 cgtgcgcagg gcgcgggcgg gcagcatgtt aataagacct caacggctat tcatctgcgt
    20221 tttgacattc gggcgtccag cctgccagag tattacaaag agcgtctgct cgccgccagc
    20281 catcatttga tcagcagtga tggcgtgatt gtcattaagg cacaggaata ccgcagtcag
    20341 gaactgaacc gcgaagcggc gctggcccgg ctggtggcag tgattaaaga tttaacaaca
    20401 gaacaaaaag cccgacgacc cacgcggccc acccgtgcat cgaaagagcg caggctggca
    20461 tcgaaagcac aaaaatcaag cgtgaaggcg atgcgcggca aagtacgcag cggtcgggaa
    20521 taaaaagaag gaatggatgg tgaaaaaagc gatagtgaca gcgatggctg taatcagcct
    20581 ctttactctg atgggatgta ataatcgggc cgaagtcgat acgctttctc cggcgcaggc
    20641 tgccgaactg aaaccgatgc cgcaaagttg gcgcggcgtg ctgccgtgtg ccgattgcga
    20701 agggatcgaa acctctctgt tcctcgaaaa agacggaaca tgggtgatga atgagcgtta
    20761 tctcggtgct cgtgaagaac cttcctcctt cgcttcctac ggtacatggg cgcgaaccgc
    20821 tgacaagctg gtattaaccg acagcaaagg tgaaaagtca tattatcggg cgaaaggcga
    20881 tgcgctggag atgctcgatc gtgaaggtaa tccgattgaa tcgcagttca actatacgct
    20941 ggaaccggca caatccagtt tacccatgac gccgatgacc ctgcggggca tgtattttta
    21001 tatggctgat gcggcgacct tcactgattg cgtgaccgga aaacgtttca tggtagcgaa
    21061 taacgcagag ctggagcgtg gatacttggc tgcgcgcggc cacagtgaaa aaccggtgtt
    21121 actgtcagta gaaggtcact ttacgcttga ggctaatccg gataccggtg cgccgactaa
    21181 agtattggca cccgatacgg cagggaaatt ttacccaaac caggattgca gtagtttggg
    21241 gcagtaaacc tgcttaaggc agaaacaaac gcaaaattgc ctgatgcgct gcgcttatca
    21301 ggcctacagc atataatgca aaattttgaa ttagcacgat tttgtaggcc ggataaggcg
    21361 ttcacgacgc atccggcatt ttgtgcacga ggctggcttt atcactgagt cagcccaaca
    21421 aagcgacccg ccttgatata aatccctggc ttcaggtgcc caacatactg taactgcgtt
    21481 tctggcttaa atgcagagac atcgccagta cgcatatgca tcagatcggc agggctaatc
    21541 cagcccgatt gcgccagtgt aagcggatgc ccggctttgg caaatgcatc agtgacaaat
    21601 tccgaacaaa accacgactt tttgtctcct tcgcccacac tgcttaactg cgctttcgcc
    21661 aggccgctga cgcactgttg gcgaaaatcc tcggagaacg gattcagtga gcacatctgg
    21721 cgagtcacca taaagggaat aaattcgaca atgccgcgat agttataacc gctatctttg
    21781 attttattgg caaacgcggt gatatctgtg gcttgttgcg gggtaagatc cgggactcgt
    21841 aagacgaaaa gcttatcact atgcttcatc gcttttttaa gggaaacaat ctggacgcca
    21901 gcgcctgtcg cttctgcaac gttattatca cccagaaaga ttgcaacgtg actcacagag
    21961 gaagtgctga agacgcggat tccaaatgag gttaccccaa ggcttgagga gaacagcaaa
    22021 tcgccgggtt tgagatcagg tgccgttatt tcttttattg attgttcggt gaaagagctt
    22081 tgatgctgga atttgacagc ccatgttttt gcctcggcat ctaccgccgt ggctgatgag
    22141 tctggctggc tgatatcaac ggtacaggcc gaaagtaaaa gaaagctggg gagaaacagg
    22201 cggcagtacg cctttggttt atccatttta tacaatccat gtaaaaaaag ggccctgaaa
    22261 ttcaggcccc tttctggcat cagcctttaa tctgtttcac cagatattcg acgatgtcac
    22321 cagtcttaat taactgtttc tcgccgttgc gacgatattt atattcgata tcgtcgttgt
    22381 cgaggttacg gtcgcccagc acaatagtgt gcggaatacc gatcagttcc atatcagcaa
    22441 acatcacgcc cggacgctct ttgcggtcat ccagcagcac ttcgataccc tgcgcacgca
    22501 gttcgctgta cagtttctca gcaagctcct gtacgcggaa ggatttgtgc atgttcatcg
    22561 gcagaatcgc cacctggaac ggcgcgatcg cgtcaggcca tacgatgccg cgttcgtcgt
    22621 agttctgctc aatcgccgca gctactacac gcgttacccc gataccgtag caacccatag
    22681 tcaggatttg gttacggcca tcttcaccct gtacggaggc tttcagtgct tcggagtact
    22741 tggtacccag ttggaagatg tgaccaactt cgataccacg tttgatcagc agcgtaccct
    22801 ggccatccgg gcttggatcg ccagccacca cgttgcggat atcagcaatt tccggggtag
    22861 cgacatcgcg atcccagttg ataccgaagt agtgtttacc atcgatgtta gcaccagcag
    22921 cgaaatcact catcgccgca acggtacggt caatcaccac cggaatcggc atgtttaccg
    22981 gacccagtga acccggaccg gctttaacca cggcacgaat ttcttcttca gtcgcaaaag
    23041 tcagcgggct ggcaacctgc ggcagttttt ctgctttaac ttcgttcagc tcgtgatcac
    23101 cgcgcaccag cagcgcaacc agcgggaagc tactgccttc aaccgcttta accagcagag
    23161 tcttaaccgt tttctcaatc ggcagattga actgttcaac cagttccgcg atggttttcg
    23221 cgttcggcgt atcaaccagc gtcatttcct gggtagcagc agcgcgcggt tctttcggcg
    23281 cgatagcttc tgccagttca atgttcgctg catagtcaga ggtgtcggag aagaccacat
    23341 cgtcttcacc gctctgcgcc agcacctgga attcgtgaga ggcgctgccg ccgatagaac
    23401 cggtgtcggc ctgtacggcg cggaaatcca gccccatgcg gctgaagatt ttgctgtagg
    23461 ccgcatacat tgcatcgtag gtttcctgca gggattcctg agaagtatgg aaagagtaag
    23521 catctttcat caggaattcg cgggaacgca tgacgccgaa acgcggacgc acttcgtcgc
    23581 ggaacttggt ctggatctga tagaagttca gcggcaactg tttgtaagag ctaagctcgt
    23641 tacgaatcag gtcagtgata acttcttcat gagttgggcc gagtacgaac ggacgctcgc
    23701 cacggtcaac aaaacgcagc agttccggac cgtactgttc ccaacgacca ctctcttgcc
    23761 acaaatcggc tggctgaacc accggcatcg acacctcgat cgcaccggcg ttgttcatct
    23821 cttcacgcac gatgttttcg acttttttca gaacgcgcac gccggtcggc agccaggtat
    23881 ataacccgga ggccagcttg cggatcatcc cggcgcgcag catcagctga tggctgatca
    23941 cctcggcgtc ggcaggtgtc tccttgagag tggagagcag gtattggcta gtacgcatgt
    24001 tgttacggtt ccagttggaa ggtagaacag gctcaaggcg agcctgggac aaaaaaagtg
    24061 atttagttta ccagtgcaaa agaaatgtca aaagagaagg gcgtgaattt aacgcggttc
    24121 cagcgcaaag acttcaaaac ctgcgtcggt gacgcgccag cgaacgttaa aatcatgtag
    24181 ccagacggca taggttttgc ccgtttcctc acctttacga taggccgggc gcgggtcctg
    24241 cgccagtact tcgcggataa acagcgttaa ctgcggataa cgcttctcca gcgtcaaaag
    24301 ctgcttttcg acctctgcgg taaaactcac cgccatctct gcaactggcg cactttgcgc
    24361 atagctggca ctggcatcgg gaagcgattc ggcaaagggg agatacggtt tgatatccac
    24421 taccggcgta ccatcgacca gatccagact gccgagcttc agaatcacgc tgtctttatg
    24481 gcaaacaacc tctttcagct ctaccagcga cataccaatt gggttagggc ggaaagtaga
    24541 gcgtgttgcg aaaaccccca ttctggcgtt accgccgagg cgcggtggac gcacagtcgg
    24601 acgccagccg ccttccatcg tttgatgaaa gacgaaaagg atccataaat ggctgaacgc
    24661 ttccaggccg cgaacggcgt cggcctggtt gtagggagca atgagatgca gttcgccgtt
    24721 ggcgcttttt accagacctg gctggcgcgg aacggcgaat ttttctttat agggcgagcg
    24781 aataacgcct atttgctcga actggaaact gctcatttcg ccgtaatgtt aagcgcagag
    24841 ccgatacata cagcctgacg atagcagcct ggcgtaccgc tggtgacttc gcagctatgc
    24901 agtaataccg cattggcttt cattttagag gcgttgattt gcatccgctt acgcgcggtt
    24961 ggaatgctcg gcggagagtc ctgattagag gcctggcaag agtcgccact gacttcaccg
    25021 agatcgcgga acggtttgcc gactaattct tctgcattgg tataaattcg gaccggcgtg
    25081 gcgcgcggcg ctttcggttt tgcaggctcc gctttcggct gaggtgcagt gctttgaacg
    25141 ggttcgacag gggatctgct taacatggaa cagccgctta gcatgagtgc tactaaacag
    25201 atcggtaaag cacgcatagt atttcctcaa tgtatgatca aaacgtcaat attgaatcag
    25261 gagcttgtaa aaatgacaag acgggcaagc gcccgtcctg aatgatatta caaattgtgg
    25321 aaacagccta aaaattacca gcctttaaca gcgccgccgt taaatacttt gtttgctgct
    25381 tcgtaaactt catcagactg ataagcctgg acgaatttct tcacgttctc ggcgtctttg
    25441 ttatcttcac gcgttacgat caggtttacg tacggggact ctttatcttc gacaaagata
    25501 ccgtctttcg ccggagtcag accaatctgg ctggcatagg tggtattgat aactgccaga
    25561 gcgatttgcg cgtcgtccag agaacgcggc agctgcggtg cttccagttc aacaattttc
    25621 agatttttgg ggttctcaac aacatcaaga acggtcggca gcaggccaac gccatctttc
    25681 agtttgatca agcccacttt ttgcagcagc agcagtgaac gaccaaggtt agttggatcg
    25741 tttggcacgg caacctgcga accatcctgc agttcatcca gtgatttgat tttcttggag
    25801 taaccagcaa tcggataaac aaaagtgttg cctactgcga ccagtttgta gccacgatct
    25861 ttcagttgct gatcaaggta cggtttatgc tggaaggcgt tggcgtcgat atcgcctttg
    25921 ctcaatgctt cgtttggcag aacatagtcg ttgaaggtta ccagctcaac gtccaggcca
    25981 tatttgtctt tcgcaacttt ctgcgcgact tctgcaacct gctgttcggc accaacaatc
    26041 acgccgactt taatgtggtt tggatctttt tcatcctgac cgcagcctac cagtgccagt
    26101 gatccaatca gggctcccac tgccgcaaag gttttgaatt tgaacgccat accttattcc
    26161 ttcttcaatt atttatgttg tgttgaacgt tacttgcgag tgacagcccg gacgatgcgg
    26221 tcgcctgcga actgaattaa ataaaccaga atgaccagca ataccagtac cgtattcatc
    26281 accatcgcat tatagccgat gtagccatac tgatagccaa tctgacctaa accaccggca
    26341 ccgacagcac cacccatcgc ggaataaccg accagggtaa tcagggtgat agttgccgca
    26401 ttcaccagac ccggcagcgc ttccggtaac agcaccttac ggacgatctg catcggcgtg
    26461 gcacccattg cacgggaagc ttcaattaac ccggttggga tctccagcag agcgttctcg
    26521 accatacggg caataaacgg tgctgcacca acggttaacg gaacaatcgc tgcctgcaaa
    26581 ccaatcgatg taccaacaat aacgcgggta aacggaatca tccataccag caagataatg
    26641 aacgggatag aacggaaaat gttcacaatc gcagaaacgg tacgatacag cttcgcgtta
    26701 gcaataattt gccccggacg cgtgacataa agcagaacgc caaccggcag accaatcaca
    26761 aagccaaaaa aaccggatac gaaggtcatt gccagcgttt cccatacgcc acgaaccagc
    26821 agccacatca tcggctcaga cataacccag tacctctact tttacatggt gttcctgcag
    26881 ccaggcaatg gcggcttgcg tatcttgttg tgtgccgtgc atttcagtca gcatgatgcc
    26941 gaacttaacg ccaccggcgt aatccatctg cgcgctaata atgttgttgt tgacgttgaa
    27001 acgacgcgcg gtttcagaaa gcagtggggc atcgaccgac tgaccggtaa actccagacg
    27061 cagcatcggc acgcagtcag tgaatggctc cgcttgcaga cgttcctggt aatcttccgg
    27121 gatatccaga tgcagggtcg actgaataaa cttctgcgcc aacggcgttt tcggatgcga
    27181 aaacacttca cttaccgtgt cctgctcgat cagttcgcca ttgctgatga ccgccacgca
    27241 atcacaaata cgctttacaa cgtccatttc gtgggtgatc aacagaatcg tcaaacccag
    27301 acggcggtta atgtctttca gcagctcgag aatagaacgt gtcgttgccg ggtccagcgc
    27361 gctggtggct tcatcacaca gcaatacttt gggattgctg gctaatgcac gggcaatcgc
    27421 cacacgttgt ttctgcccac cggaaagatt cgacgggtag ctatcatgct tatcgccaag
    27481 accaaccaat gacagcaatt ccgtcacgcg acgtttgatc tcgtctttcg gtgtgttgtc
    27541 cagctccagc ggcagagcca cgttgccaaa aacagtacgc gaagagagca ggttaaaatg
    27601 ctggaaaatc ataccaatct ggcggcgagc tttggtcaac tcggattctg acagcgtggt
    27661 caattcctgg ccatcgacca gcacgctacc ctcggttggg cgctccagca ggtttacaca
    27721 acgtataagc gtactcttac ccgcgcctga ggcaccgata acgccataaa tttgtccagc
    27781 tggcacatgc aggctgacgt tgttcaacgc ctggatggtg cgggtgccct ggtggaacac
    27841 tttggtgata ttcgaaagct ttatcattga ttatttatta tcgtcattaa gttagtcgtg
    27901 gcatttcgaa tgcctgaaac gggcaacgcc gtcaatgaaa tggatgttaa ggcatccaga
    27961 cgtctaaatc aatcagattt atgcgaagag cactttcttg ctggtcgaaa catgcgatac
    28021 tagcgtcaca tgccttatta aggagctata aaaggtggcg aagagcgtac ccgcaatttt
    28081 tcttgaccgt gatggcacta ttaatgtcga tcacggctat gtccatgaga tcgacaactt
    28141 tgaatttatc gacggtgtta ttgacgccat gcgcgagcta aaaaaaatgg gcttcgcgct
    28201 ggtggtagtc accaaccagt ctggcattgc tcgcggtaaa tttactgaag cacagtttga
    28261 aacgctgacc gagtggatgg actggtcgct ggcggaccgc gatgtcgatc tggatggtat
    28321 ctattattgc ccgcatcatc cgcagggtag tgttgaagag tttcgccagg tttgcgactg
    28381 ccgcaaacca catccgggga tgcttttgtc agcacgcgat tatttgcata ttgatatggc
    28441 cgcttcttat atggtgggcg ataaattaga agatatgcag gcagcgactg cggcgaacgt
    28501 gggaacaaaa gtgctggtgc gtacgggtaa acctgttacg cctgaagcag aaaatgcggc
    28561 ggattgggtg ttaaatagcc tggcagacct gccgcaagcg ataaaaaagc agtaaaaacc
    28621 ggcgtaatga ttaaaagatg agcggttgaa ataaaaaagc atttttccgc ttgtcttcct
    28681 gtgacgactc cctataatgc gcctccatcg acacggcgga tgtgaatcac ttcacacaaa
    28741 cagccggttc ggttgaagag aaaaaatcct gaaattcagg gttgactctg aaaga
//
LOCUS       DAJVTL010000050        28016 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.050, whole genome shotgun sequence.
ACCESSION   DAJVTL010000050 DAJVTL010000000
VERSION     DAJVTL010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28016
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.050"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..1497
                     /gene="atoS"
                     /locus_tag="OQQ26_002029"
                     /pseudo
     CDS             1..1497
                     /gene="atoS"
                     /locus_tag="OQQ26_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416723.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     AtoS"
     gene            1527..1928
                     /locus_tag="OQQ26_002030"
     CDS             1527..1928
                     /locus_tag="OQQ26_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HCS1857490.1"
                     /translation="MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLF
                     ADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDY
                     VIKPFDLDELNLIVQRALQLQSMKKESRHLH"
     gene            1932..2912
                     /gene="atoC"
                     /locus_tag="OQQ26_002031"
     CDS             1932..2912
                     /gene="atoC"
                     /locus_tag="OQQ26_002031"
                     /inference="COORDINATES: protein motif:HMM:NF008469.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate metabolism transcriptional
                     regulator AtoC"
                     /protein_id="HCS1857491.1"
                     /translation="MSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGK
                     ELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERAN
                     EGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKE
                     GTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLL
                     TAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPVGERNLK
                     EEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGIDPADV"
     gene            3108..3770
                     /gene="atoD"
                     /locus_tag="OQQ26_002032"
     CDS             3108..3770
                     /gene="atoD"
                     /locus_tag="OQQ26_002032"
                     /EC_number="2.8.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate CoA-transferase subunit alpha"
                     /protein_id="HCS1857492.1"
                     /translation="MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGV
                     RDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGT
                     LIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCD
                     TLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTLGAVIDHIIVSQE
                     SK"
     gene            3770..4420
                     /gene="atoA"
                     /locus_tag="OQQ26_002033"
     CDS             3770..4420
                     /gene="atoA"
                     /locus_tag="OQQ26_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate CoA-transferase subunit beta"
                     /protein_id="HCS1857493.1"
                     /translation="MDAKQRIARRVAQELRDGDIVNLGIGLPTMVANYLPEGIHITLQ
                     SENGFLGLGPVTTAHPDLVNAGGQPCGVLPGAAMFDSAMSFALIRGGHIDACVLGGLQ
                     VDEEANLANWVVPGKMVPGMGGAMDLVTGSRKVIIAMEHCAKDGSAKILRRCTMPLTA
                     QHAVHMLVTELAVFRFIDGKMWLTEIADGCDLATVRAKTEARFEVAADLNTQRGDL"
     gene            4417..5739
                     /locus_tag="OQQ26_002034"
     CDS             4417..5739
                     /locus_tag="OQQ26_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00366 family protein"
                     /protein_id="HCS1857494.1"
                     /translation="MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPI
                     SMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVT
                     FFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPL
                     LAATPGNPVEHIAGLIPVGDTLFSGFNIFITVTLIVVMPFITRMMMPKPSDVVSIDPK
                     LLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNL
                     MFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFI
                     NVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYG
                     EQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF"
     gene            5770..6954
                     /gene="atoB"
                     /locus_tag="OQQ26_002035"
     CDS             5770..6954
                     /gene="atoB"
                     /locus_tag="OQQ26_002035"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HCS1857495.1"
                     /translation="MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKID
                     SQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAI
                     QAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGI
                     TAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDE
                     FPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARI
                     KSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFD
                     SEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIER
                     LN"
     gene            complement(7028..7804)
                     /locus_tag="OQQ26_002036"
     CDS             complement(7028..7804)
                     /locus_tag="OQQ26_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfaP family protein"
                     /protein_id="HCS1857496.1"
                     /translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF
                     SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSF
                     ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV
                     VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETE
                     LTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW"
     gene            complement(7809..9458)
                     /locus_tag="OQQ26_002037"
     CDS             complement(7809..9458)
                     /locus_tag="OQQ26_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfaQ family protein"
                     /protein_id="HCS1857497.1"
                     /translation="MNWRRIVWLLVLVTLPTLAEETPLQLALRGAQHDQLYQLSSSGV
                     TKASTLPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD
                     TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA
                     TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD
                     GTPLWATGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST
                     TAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE
                     AKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT
                     QDFIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS
                     TCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN
                     FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD"
     gene            complement(9459..13940)
                     /locus_tag="OQQ26_002038"
                     /pseudo
     CDS             complement(9459..13940)
                     /locus_tag="OQQ26_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000536590.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
     gene            complement(13964..14582)
                     /locus_tag="OQQ26_002039"
                     /pseudo
     CDS             complement(13964..14582)
                     /locus_tag="OQQ26_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311139.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 domain-containing protein"
     gene            complement(14579..16267)
                     /locus_tag="OQQ26_002040"
     CDS             complement(14579..16267)
                     /locus_tag="OQQ26_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2138 domain-containing protein"
                     /protein_id="HCS1857498.1"
                     /translation="MSGEKKAKGWRFYGLVGLGAIALLSAGVWALQYAGSGPEKTLSP
                     LVVHNNLQIDLNEPDLFLDSDSLSQLSKDLLTIPFLHDVLSEDFVFYYQNHADRLGIE
                     GSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPL
                     LFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFK
                     DDQQDTEATAIASDLLSGKKRWQASFGLEERTAEKTPVRLRIVASARLLGFGYQRLMP
                     SFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAE
                     EMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNI
                     GVHESKAPEGVLPVSQTQQGEAQIWCREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLA
                     MQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLT
                     SLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGVAWQWLPITWQPL"
     gene            complement(16416..19043)
                     /gene="gyrA"
                     /locus_tag="OQQ26_002041"
     CDS             complement(16416..19043)
                     /gene="gyrA"
                     /locus_tag="OQQ26_002041"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HCS1857499.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDGKTGRETIIVHEIPYQVNKARLIEK
                     IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
                     IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
                     VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
                     LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDEL
                     IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
                     DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
                     EGDDEIAPEVDVDDEPEEE"
     gene            19190..19912
                     /gene="ubiG"
                     /locus_tag="OQQ26_002042"
     CDS             19190..19912
                     /gene="ubiG"
                     /locus_tag="OQQ26_002042"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HCS1857500.1"
                     /translation="MNAEKSPVIHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
                     LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
                     ITNTFKLGPGVDVNYMLHTQNK"
     gene            complement(20053..22458)
                     /gene="yfaL"
                     /locus_tag="OQQ26_002043"
                     /pseudo
     CDS             complement(20053..22458)
                     /gene="yfaL"
                     /locus_tag="OQQ26_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416736.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA-I family autotransporter adhesin YfaL/EhaC"
     gene            23310..25595
                     /gene="nrdA"
                     /locus_tag="OQQ26_002044"
     CDS             23310..25595
                     /gene="nrdA"
                     /locus_tag="OQQ26_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HCS1857501.1"
                     /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
                     YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACP
                     WFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLVPSIQDDGCESGACKI"
     gene            25829..26959
                     /gene="nrdB"
                     /locus_tag="OQQ26_002045"
     CDS             25829..26959
                     /gene="nrdB"
                     /locus_tag="OQQ26_002045"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HCS1857502.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL
                     FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL"
     gene            26959..27213
                     /gene="yfaE"
                     /locus_tag="OQQ26_002046"
     CDS             26959..27213
                     /gene="yfaE"
                     /locus_tag="OQQ26_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HCS1857503.1"
                     /translation="MARVTLRITGTQLLCQDEHHSLLAALESHNVAVEYQCREGYCGS
                     CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(27267..27918)
                     /gene="inaA"
                     /locus_tag="OQQ26_002047"
                     /pseudo
     CDS             complement(27267..27918)
                     /gene="inaA"
                     /locus_tag="OQQ26_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708127.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA"
BASE COUNT         6605 a         7609 c         7002 g         6800 t
ORIGIN      
        1 ggcgctggtt attacaacaa aacgctggat gcgataatca cctacgcacc ttcagcgcta
       61 tatcagaata atgtcggcgt taccattgcc gcagatcacc ccggtcgcga agtcatgcgt
      121 acaaataccc ctttggttta ttcaggcagg caggtgcgcg gcgatatttt gaattcaatg
      181 atccccattg agcgtaatgg tgaaatcctc ggctatatct gggccaatga attaaccgaa
      241 gatattcgcc gccaggccta gaaaatggat gtgaggatta tcattgtgct caccgccggt
      301 ttgctgataa gcctgctgtt gattgtcctt ttctcccgtc gcctgagcgc caatatagat
      361 atcatcaccg atggcctctc gactctggca caaaatattc ccactcgatt accacaattg
      421 cccggtgaaa tggggcaaat cagtcagagt gttaacaacc tcgcccaggc actgcgtgaa
      481 acgcggacac ttaacgatct gattattgaa aacgctgccg atggcgtcat tgccattgac
      541 cgccagggtg atgtaaccac catgaacccg gcagcagaag ttatcactgg ctatcaacgt
      601 catgaactgg tagggcagcc ttactccatg ttgttcgaca atactcagtt ctacagtcca
      661 gtactggata cgctgaaaca tggcaccgaa catgtggcgc tggagatcag ttttccaggc
      721 cgtgaccgca ccattgaact cagtgtcact accagtcgta ttcataacac gcacggtgaa
      781 atgataggtg ctttggtgat tttctctgat ttaactgccc gcaaagaaac ccagcgccgc
      841 atggcgcaag cagaacgcct cgccacactg ggtgagctga tggctggcgt cgcgcatgaa
      901 gtacgtaatc cgctaacggc tattcgtggt tatgtacaga tcttgcgcca acaaaccagc
      961 gacctaatac atcaggaata tctgtccgta gtactcaaag aaatcgattc aattaacaaa
     1021 gttattcagc aattgctcga attttcacgt ccacgccaca gtcaatggca acaagtcagc
     1081 ctcaatgcat tggttgaaga aactctggta ctggtacaaa ccgccggcgt acaagcgcgg
     1141 gtcgacttca taagcgaact ggataatgaa ttaagcccga ttaacgccga tcgtgaactg
     1201 ctcaaacagg tactactgaa tatcctgatc aatgccgtcc aggctatcag cgcacgaggg
     1261 aaaattcgca ttcaaacctg gcaatacagc gactcacaac aggccatttc gatagaggac
     1321 aacggctgtg gcattgatct ctcgctgcaa aaaaagatct tcgatccctt tttcaccacc
     1381 aaagcctcag gaaccgggct tggtctggcg ttaagtcaac gcatcattaa tgcccatcag
     1441 ggtgatattc gcgtcgccag tttgccaggc tacggcgcaa ccttcacgct tatttgaccg
     1501 atcaacccgc agggaaatca gactgtatga ctgctattaa tcgcatcctt attgtggatg
     1561 atgaagataa tgttcgccgt atgctaagca ccgcttttgc actacaagga ttcgaaacac
     1621 attgtgcgaa caacggacgc acagcattac acctgtttgc cgatattcac cctgatgtgg
     1681 tgttgatgga tatccgcatg ccagagatgg acggcatcaa ggcactaaag gagatgcgca
     1741 gccatgagac ccggacaccc gttattctga tgacggccta tgcggaagtg gaaaccgccg
     1801 tcgaagcgct acgctgcgga gccttcgact atgttattaa accgtttgat ctcgatgagt
     1861 tgaatttaat cgttcagcgc gctttacaac tccagtcaat gaaaaaagag agccgtcatc
     1921 tgcactaggc actgagcacc agctggcaat gggggcatat tctcaccaac agcccggcga
     1981 tgatggacat ctgcaaagac accgccaaaa ttgccctttc tcaggccagc gtcttgatta
     2041 gcggtgaaag cggcaccggg aaagagttga ttgccagagc gattcactac aattcgcggc
     2101 gggcaaaggg gccgttcatt aaagtcaact gcgcggcgct gccggaatcg ttgctcgaaa
     2161 gtgaactgtt tggtcatgaa aaaggtgcat ttactggtgc acaaaccttg cgtcagggat
     2221 tatttgaacg agccaacgaa ggtactctgc tcctcgacga aattggcgaa atgccgctgg
     2281 tactacaagc caaattacta cgcattctac aggaacggga atttgaacgg attggcggcc
     2341 atcagaccat aaaagttgat atccgcatca ttgctgccac caaccgtgac ttgcaggcaa
     2401 tggtaaaaga aggcaccttc cgtgaagatc tcttttatcg ccttaacgtt attcatttaa
     2461 tactgccgcc tctgcgcgat cgccgggaag atatttccct gttagctaat cactttttgc
     2521 aaaaattcag tagtgagaat cagcgcgata ttatcgacat cgatccgatg gcaatgtcac
     2581 tgcttaccgc ctggtcatgg ccgggaaata ttcgagagct ttccaacgtt attgaacgcg
     2641 ccgtcgtgat gaactcaggc ccgatcattt tttctgagga tcttccgcca cagattcgtc
     2701 agccagtctg taatgctggc gaggtaaaaa cagcccctgt cggagagcgt aatttaaaag
     2761 aggaaattaa acgcgtcgaa aaacgcatca ttatggaagt gctggaacaa caagaaggaa
     2821 accgaacccg cactgcttta atgctgggca tcagtcgccg tgcattgatg tataaactcc
     2881 aggaatacgg tatcgatccg gcggatgtat aacgccaaaa cttgctatgc agaaatttgc
     2941 acagtgcgca attttctgca tagccgctta ttctccttat aaatccccat ccaatttatc
     3001 ccttcatatt caattagtta aataactaaa tccaataatc tcattctggc actccccttg
     3061 ctattccctg actgtaccca caacggtgta tgcaagaggg ataaaaaatg aaaacaaaat
     3121 tgatgacatt acaagacgcc accggcttct ttcgtgacgg catgaccatc atggtgggcg
     3181 gatttatggg gattggcact ccatcccgcc tagttgaagc attactggaa tctggtgttc
     3241 gcgacctgac attgatagcc aatgataccg cgtttgttga taccggcatc ggtccgctca
     3301 tcgtcaatgg tcgagtccgc aaagtgattg cttcacatat cggcaccaac ccggaaacag
     3361 gtcggcgcat gatatctggt gagatggacg tggttctggt gccgcaaggt acgctaatcg
     3421 agcaaattcg ctgtggtgga gctggacttg gtggttttct caccccaacg ggtgtcggca
     3481 ccgtcgtaga ggaaggcaaa cagacactga cactcgacgg taaaacctgg ctgctcgaac
     3541 gcccactgcg cgccgacctg gcgctaattc gcgctcatcg ttgcgacaca cttggcaacc
     3601 tgacctatca acttagcgcc cgcaacttta accccctgat agcccttgcg gctgatatca
     3661 cgctggtaga gccagatgaa ctggtcgaaa ccggcgagct gcaacctgac catattgtca
     3721 cccttggtgc cgttatcgac cacatcatcg tttcacagga gagcaaataa tggatgcgaa
     3781 acaacgtatt gcgcgccgtg tggcgcaaga gcttcgtgat ggtgacatcg ttaacttagg
     3841 gatcggttta cccacaatgg tcgccaatta tttaccggag ggtattcata tcactctgca
     3901 atcggaaaac ggcttcctcg gtttaggccc ggtcacgaca gcgcatccag atctggtgaa
     3961 cgctggcggg caaccgtgcg gtgttttacc cggtgcagcc atgtttgata gcgccatgtc
     4021 atttgcgcta atccgtggcg gtcatattga tgcctgcgtg ctcggcggtt tgcaagtaga
     4081 cgaagaagca aacctcgcga actgggtagt gcctgggaaa atggtgcccg gtatgggtgg
     4141 cgcgatggat ctggtgaccg ggtcgcgcaa agtgatcatc gccatggaac attgcgccaa
     4201 agatggttca gcaaaaattt tgcgccgctg caccatgcca ctcactgcgc aacatgcggt
     4261 gcatatgctg gttactgaac tggctgtctt tcgttttatt gacggcaaaa tgtggctcac
     4321 cgaaattgcc gacgggtgtg atttagccac cgtgcgtgcc aaaacagaag ctcggtttga
     4381 agtcgccgcc gatctgaata cgcaacgggg tgatttatga ttggtcgcat atcgcgtttt
     4441 atgacgcgtt ttgtcagccg gtggcttccc gatccactga tctttgccat gttgctgaca
     4501 ttgctaacat tcgtaatcgc gctttggtta acaccacaaa cgccgatcag catggtgaaa
     4561 atgtggggtg acggtttctg gaacttgctg gcgtttggta tgcagatggc gcttatcatc
     4621 gttaccggtc atgcccttgc cagctctgct ccggtgaaaa gtttgctgcg tactgccgcc
     4681 tccgccgcaa agacgcccgt acagggcgtc atgctggtca ctttcttcgg ttcagtcgct
     4741 tgtgtcatca actggggatt tggtttggtt gtcggcgcaa tgtttgcccg tgaagtcgcc
     4801 cggcgagtcc ccggttctga ttatccgttg ctcattgcct gcgcctacat tggttttctc
     4861 acctggggtg gcggcttctc tggatcaatg cctctgttgg ctgcaacacc gggcaacccg
     4921 gttgagcata tcgccgggct gatcccggtg ggcgatactc tgttcagtgg ttttaacatt
     4981 ttcatcactg tgacgttgat tgtggtgatg ccatttatca cccgcatgat gatgccaaaa
     5041 ccgtctgacg tggtgagtat cgatccgaaa ctactcatgg aagaggctga ttttcaaaag
     5101 cagctaccga aagatgcccc accatccgag cgactggaag aaagccgcat tctgacgttg
     5161 atcatcggcg cactcggtat cgcttacctg gcgatgtact tcagcgaaca tggcttcaac
     5221 atcaccatca ataccgtcaa cctgatgttt atgattgcgg gtctgctgct acataaaacg
     5281 ccaatggctt atatgcgtgc tatcagcgcg gcagcacgca gtaccgccgg tattctggtg
     5341 caattcccct tctacgctgg gatccaactg atgatggagc attccggtct gggcggactc
     5401 attaccgaat tcttcatcaa tgttgcgaac aaagacacct tcccggtaat gacctttttt
     5461 agttctgcac tgattaactt cgccgttccg tctggcggcg gtcactgggt tattcaggga
     5521 cctttcgtga tacccgcagc ccaggcgctg ggcgctgatc tcggtaaatc ggtaatggcg
     5581 atcgcctacg gcgagcaatg gatgaacatg gcacaaccat tctgggcgct gccagcactg
     5641 gcaatcgctg ggctcggtgt ccgcgacatc atgggctact gcatcactgc cctgctcttc
     5701 tccggcgtca ttttcgtcat tggtttaacg ctgttctgac ggcaacccta cagacagaag
     5761 gaatataaaa tgaaaaattg tgtcatcgtc agtgcggtac gtactgctat cggtagtttt
     5821 aacggttcac tcgcttccac cagcgccatc gacctggggg cgacagtaat taaagccgcc
     5881 attgaacgtg caaaaatcga ttcacaacac gttgatgaag tgattatggg taacgtgttg
     5941 caagccgggc tggggcaaaa tccggcgcgt caggcactgt taaaaagcgg gctggcagaa
     6001 acggtgtgcg gattcacggt caataaagtg tgtggttcgg gtcttaaaag tgtggcgctt
     6061 gccgcccagg ccattcaggc aggtcaggcg cagagcattg tggcgggggg tatggaaaat
     6121 atgagtttag cgccctactt actcgatgca aaagcacgct ctggttatcg tcttggagac
     6181 ggacaggttt atgacgtaat cctgcgcgat ggcctgatgt gcgccaccca tggttatcat
     6241 atggggatta ccgccgaaaa cgtggctaaa gagtacggaa ttacccgtga aatgcaggat
     6301 gaactggcgc tacattcaca gcgtaaagcg gcagccgcaa ttgagtccgg tgcttttaca
     6361 gccgaaatcg tcccggtaaa tgttgtcact cggaagaaaa ccttcgtctt cagtcaagac
     6421 gaattcccga aagcgaattc aacggctgaa gcgttaggtg cattgcgccc ggccttcgat
     6481 aaagcaggaa cagtcaccgc tgggaacgcg tctggtatta acgacggtgc tgccgctctg
     6541 gtgattatgg aagaatctgc ggcgctggca gcaggcctta cccccctggc tcgcattaaa
     6601 agttatgcca gcggtggcgt gccccccgca ttgatgggta tggggccagt acctgccacg
     6661 caaaaagcgt tacaactggc ggggctgcaa ctggcggata ttgatctcat tgaggctaat
     6721 gaagcatttg ctgcacagtt ccttgccgtt gggaaaaccc tgggctttga ttctgagaaa
     6781 gtgaatgtca acggcggggc catcgcgctc gggcatccta tcggtgccag tggtgctcgt
     6841 attctggtca cactattaca tgccatgcag gcacgcgata aaacgctggg gctggcaaca
     6901 ctgtgcattg gtggcggcca gggaattgcg atggtgattg aacggttgaa ttaatcaata
     6961 aaaacacccg atagcgaaag ttatcgggcg ttttcttgaa catcgacggc gaaggtaacc
     7021 ccattaatca ccagtcaaaa cttttcacca gcgtcagctc gccagcatta cgcatcggta
     7081 caataaatgt ttcctgtttc tcattgaccg atccttcatc ggtgatcagc gtcagttggg
     7141 cggtggttaa ttccgtttcg ctgcgcccac catagtagtt gatatacacc tgataacggc
     7201 cgtgaactgg cgctggcatg gcgaaaatct cgggtccgta ccccgtcgtg acatccatat
     7261 ccagtgcacc actgtttttc agcacggtat taccgtacca ggcgtgttcg ccatcgggtg
     7321 taacaacatg gagatcgaga tcggtattgt ccgtatccca ggagagaacc agccgtaaac
     7381 gtgcacgaat cgttcctgta cccggcgttg agtaaaactg cattttttgt cggctttgcc
     7441 catcagggct gatgacctgc acgctgttac tgccttctgt gaaaatataa gggcgtgcaa
     7501 atgaaccatc ggattcaatt ctctgcggca tactggcacc gttgaccacc agccggccct
     7561 gctgaacttt acccgccgca gcataattct ttattttgcc gcggatctgc gctgagatat
     7621 tttgatcatc tgccatgttg acggacgacg ccgggtaatt gatcgattgt gaaaaactgg
     7681 catcttcgcc ctctgccgga tgccagccag agagcggtgc gtcaatctcg acttcctgca
     7741 caccttcact gtgagcgaca ggcgaaagtg ccaccagtaa caacggaaga aaaatctttc
     7801 gcatagcatt agtccattaa taattgtcgg gtcagcgttt cgatatagtt ctcatcaagc
     7861 ccggtgggat aaccatcaaa ggccaggtgc agatactcat gggttaaatc cagccgatcc
     7921 tgaagcgtaa agaagttacg aataaacagc cgtttctgct gccgatcggt ataggggaaa
     7981 cctgagacta aacgacagac cgcaaacacg tctggttcgt tgtaccccgt ctcgccttgt
     8041 aatatacgcc gccactgcgg catttttttc gccagccagg ctttcgcttt gggtaataac
     8101 tggcaggttg agcgtggagc tccccagcgg ctaaggctgt tgtcgggata agcaaacgcg
     8161 agtatctggt cgtaacgctc cccctgcccc gcctgggccg tggcttgccg ccaggaaagt
     8221 gtcccttcgg tagcgcgact gccatgataa tgaaccggat cgcctgcata gatgaaatcc
     8281 tgcgtccagg cggtcatcgt tcgcgccccc gtggtcgctg gcgaagcaga aacacgctgc
     8341 gtggcgctgc tgtcggggat ggtcaggcaa tcgccttccc gattggcgtt ttgctgtaaa
     8401 aaagtgcgaa tcgccacggt catggctttc gctgcctcag ggggcgtact tttcgcctcg
     8461 cgatccagaa ctctggcaac gtactcttca cgatcgagat gcgactgcaa tttcagtttg
     8521 cccttttcgc tcagtaaggt cgtctcaccg tgactgacaa acgtaatgtg gttaccatta
     8581 gtaaacgtca cacgatagcg cccattaagt acgccgggtt ttactgccgt cgtactcttt
     8641 tccgctgtga ttttcttcag cggatagcgg gcaaacagct ccacctctac acattgccca
     8701 ctggcaacct gcgtcggcac tggtaaaacc cgattaagca ccgtcgcata acgggttagt
     8761 accgttttgc tggtgccact gccagtagcc cacagcggtg tgccatcggt taaccagccg
     8821 gcaaaaccac cctgacggat ttcctgttta tcatcggcaa accagctcca ggttttcacc
     8881 cgtacccgac taccgagcat ggatgcgact ccgattttcg cctcgtccag caccacatcc
     8941 agtaagactt cctgagcttt gttttgcgcg ggtaacgtcg ctaatgaatc aagcagcgat
     9001 ttaaccgtta ccgaggtttc tggcttcagc gtagtcagag acgctaacca cgcaggtgcc
     9061 tgacgctgtt gccagtattg cccccacaca tctgcgccaa tatgcaaccg ctgcggcgca
     9121 aaatagagtc cacaggaacg taccagcgcg gtatcgcgcg ttatgctctc cccagcctga
     9181 caacaataaa cctcttccgg ggagtttcca cgacactggt agggctgctc cggttgatgg
     9241 gtatcctcca gccaggcgta aacatacagt ttccacaaac tccctaacgg cgtggtgagc
     9301 gagtcaggta atgtcgaggc tttggtcacg cctgatgacg acagttgata cagttgatcg
     9361 tgctgcgcac cacgcagtgc cagttgtaac ggcgtctcct ccgcaagtgt tggcagagta
     9421 accaacacca atagccagac gattctgcgc cagttcactt atttcacctg catcccgggc
     9481 cattcactcc ctgccgcaac actttgctgt gcaggtgcat aggaacgcac ataacgagca
     9541 ggaggcagaa cgaattgccc tttttgcgag aagctcagca aatggcggaa agtgaccgtt
     9601 cccgtcagtt ctttcaccgg caccatatag gccagttcgc ccatttcatt tcgcgctttt
     9661 tccagcaatt gcccctgctg ttttccagcg ttgggtttat tgaccgaaat gccccatgtt
     9721 gtgcgctcaa cgtcggctcc cggcgggagc ggtacttcca cctgaccgta gcgcagaact
     9781 gcatcctgct cgctggtaag cgtaatttca tcgagataca gcgcatcgct gtcaatctca
     9841 ttgctggtca ccggctgcag agtaaagctc atctcttctt caccggggat aagccgatac
     9901 aactggcgtt caacggttac cggaatgtta ctttgttgag ccttttttgc cggttcacgc
     9961 cagcggacct gcacattttg cggcgacaat tcatcaccaa aagagagaat gtccggcacg
    10021 ccctgaccaa cccaacgcca gtattcgccc cctccagtta acttatgttt ggcccatgcg
    10081 cccgcaggcg caggcaaaac aactggaggc attgtcgcca tatatttcgc cagccagttc
    10141 atggccagcg cgcgctcaat agtagattgc tcagcggtca aaccacttaa aatagcagcc
    10201 gcctgggtag cgtcgccccc gctattgagc agcacaaccg tgtgcgccag cggctgattg
    10261 ctgtttgccg ctttatccca cgcatattgc tgaacctgtg gcatcaccgt gggcttcaac
    10321 tgcgcttttt tcagcaacgt catggttaag acgtttgcca ccgcatctgc cagtggagat
    10381 tccggtgtat cgaagatcag gctgtcattg atatcgctgg ggtcttcctc agagaaatct
    10441 tcagttttag ttccgcgccg ggcgatagct tcatccaacc ctttcaacaa cgttttgcac
    10501 ggcagattca tctcctgtgc ccacgccagc accagcgccc gatgcaataa cggcatgtta
    10561 tctgcctgct cggcataact gtcgagcata tgctgccagt attccggttg ttgcgttacg
    10621 ccgagcgcct ggctggcctg ccagtcggcg taccatgccc atgccgtaag gaaggcgtca
    10681 ccattgccat cttcacccca ccaggtaaag cgcgctccgg gccccgccag ttgcatcagc
    10741 cgcaggcggt tatcctgaat catctgacga atgtcgttag cggcggcact ttgatgatcg
    10801 gcaagcgaac gccaggcgag actgagcggg atcagacggc taccggtgtt gatcacccca
    10861 ccccacggtt catcgactaa cgcatcaaga ttgttgcgga aaatctcctg cggcgtttca
    10921 ctactttgta gccggatatt gctcgcctgc tcgggcaaca tcagcgcgtt ctcgccacca
    10981 ccgagcatga catttttctg ctgttcaacg ggccagctgt tatccacaaa agacagtttt
    11041 gtgctaatgc tgtcctgcac ttgcccattt tgttgcagtt ctgcacttaa caagccagat
    11101 tgctgaatat tctgcgtcag cgtctggcgc atctcagcgc ctgcaaattt agtcaccagc
    11161 gccaccggtt cattatcctg ctgactgaag ataaacagtc ctgccgacgg tttgtcgccc
    11221 acgcgataca ccgttggcat actccacttc atgtagagat ttttttccga acgcagataa
    11281 gcacgcccct gcccgaccag cccgtcgccg ttcatcccac gcgcagtgat acgccagcgg
    11341 gttagcgaat caggcatcag gaacgtgaaa tacgctttgc cttgtttatc ggttgtgagt
    11401 gacggcatcc atgccgcggt atccacctct tcacgccgtg gacgttcaag catttttact
    11461 cgccgctcgc tgcggtttgt tgcgccaggc gcaaccggct cgctggagag cgcctagtcg
    11521 tagctgataa acgacagact ggagctggta cgcacattgt tacgccccag cggatagaaa
    11581 aatttgccga tattcggcgc gatttctggt tgcagcgcgt agatcatttc atcgaccacg
    11641 cctaccgtta gctgcgcaga aacaggttta cctttcagcg acgaggttaa ttcgacattg
    11701 accagttcac caggctggta atgggttttg tccgttttca cccggatatc aagctgagga
    11761 acggcaactt tgatcccggc gttctgaaaa ctgtactgac cattacgggt atacagcacc
    11821 gaaaaagtga tgttaggcgc aaaggaattg ctcactggta cgcgggcttc atactgggta
    11881 tcgtttaaac gttgtagcgt tagccagttt gccggatgcg aaagcagcga ctgctgttcc
    11941 acgcgatcgc gttccagcgt caataatgct tcatcaattg gctccggaaa ggtaatcagc
    12001 atcttcgcgg tttcgcctgg ctggtacagc gttttatccg ccacgatatc taccgtacca
    12061 gtatgcgccg tgctgccctt accgctgacg gcatgactta acccagcgag aattaagccg
    12121 tctttatcgc gtaatgtcag attgtagttg ccaggtttag cgaaattgac ggtaaaggat
    12181 ttgccgcctg acggtagatc tccgctatgg ctcgtgcggt cttcgagacg caaccagtca
    12241 tacgtaacag gaacctgttt tgaagattcc agcgcggcat aacggaacac aaccgactcg
    12301 ccgctattac tgtattgtgc ggcggtactt aaagagtaat gcgccaggcc gcgttcaatg
    12361 aggatctctt tggtggtggt gacgcgatac gccgcgccgt cactggcgga gacggttaac
    12421 aaatagcggc tcggtttatc ggcggcgggg agatttaacg ccacatgacc gctggcgtcg
    12481 gacaccgttt cgctgccttc cagcgacacg gggaaacgtc cggcataacg caaatcgtta
    12541 ccgaccattg ataattgctg agcgcgcaaa cttaactgca cgcgggcatc ttttaccggc
    12601 tcgccatccg ggtagagcag ttgcagtttg ccgctgaccg cttcgccagt tttgaactct
    12661 tttttgtcga gagctaaacc aatctcgaaa tgtggcttga tgtagtttgc cacgcgaaaa
    12721 ctgctgctat agacctgatt gcggtaagca agacgtaact cataacctcc ggcaacggca
    12781 ttttctggca ggcggaaact tccctgcccg ccattgcgcg catccagcgt gacatcgacg
    12841 gtttgcaaca gactgccgtt ggcgtccagc accgaaagct tcgccggggc gctgacgatg
    12901 ggggatgaat gcaacggatc gtggaactcg cggcccatca ctttaacatc gacacgatcg
    12961 cctgcgcgat atagcgggcg atcggtaaaa atatacaagc gggtgttgta gatttcgctt
    13021 tcgtagaaga agttctcgga gacaaaaacg ccgccttcag catccttacc cagaatgtat
    13081 gaacgttctg gcgatatatg ttgtaactgc aaagtaccgc tgtcatcggt caccccgcgg
    13141 gtcatcacgc caagaccgtc agtccacaag atctctgagc cgggcttcgc ttcaccctgt
    13201 tttttacccg cggtccatac cagaagctcg ttacctgaca ctttgctaag cgccacggta
    13261 tcggaaacaa acaccaccgt cgtcgcccga tacccaccta ccatcgcctc gacgaggtac
    13321 agccccggct cttgtttgcc gagaggaata tagatgttgc ccggctgcgg cgagatgaaa
    13381 ttgctggatg cgccttccag ttttacccct tgctgcggct cgactggttt agcctgccat
    13441 aatgggtaac ggaactgttc caccagtgga tattttttca gcggggaaaa ctggttgttc
    13501 tgtacataac gggaaggttt aataatggca ttgccgagct gtaattcggg taacgcctga
    13561 gtcacattct gccatgactg agaagagaaa gtacgctgca tcacgcggcg agatttgccg
    13621 taccagttat cccacagcca ggccagcgta ttgttcagcc cgtcgcccag atattgcggt
    13681 tgcaccacaa tgcgatgcag gtttttctgc tggcgcaaaa atgccatcgg gtcaggaata
    13741 cgatacagac gaatgtccac accgccgtac tcttccatct gatagcgccg gtaatcacgc
    13801 cccggcgctt ccagtcgcac tttcgcctct tcactgctgc taaaactgct gtcagcaagc
    13861 aaaaagaatg ttcccccggc gggcggcgca tagttgctgg aaggaagcga atcatcagca
    13921 ttagcaagcc ctgttcccac aagagacagg gacaagcacg ctgctatcgc gtcagaaaat
    13981 ttaaacgata aatgccaatg aaattgggat tggaatcgtt gggtatccat cgggtgtcct
    14041 tccatgtcat aagttgttgc agactgactg cgcgcattcc gttgtcagtt ttcgtggcgc
    14101 ttccggtgtg gtagatgacg taacgcccca tccagaccat taagtgctgg gcatcgccct
    14161 gatcgaaaaa aatcatatcg ccaggcagcg cttggtttat gtcctggcca ataaactggc
    14221 tgttgtactg aatcaaatta atcgcggtca cataggggcc ggttttcccg ttcccctgat
    14281 tccagttttg cgccagttga cgctgttcag gtgttagcgt catctctggc ggcaaatact
    14341 ggttagataa accgttactt tttagccatt tactgtcgtg aactttcagc gtctcgttcg
    14401 ctgcaaatcg caccaggccc gcacaatcct gctgatacca gcgtggactt ggcccctggc
    14461 ggagctgttc ttgtgcaatg cgtacaaacc aggcgcgaaa cagcccggat tgttcgacat
    14521 tcagcatttc gctatgggca acaacacagc cagcaaatca gcgccagcag cccgtgtctc
    14581 atagcggctg ccaggttatg ggtagccact gccaggcgac accgggttcc atctgggcca
    14641 gcttcatgac ataacgcggt tgttgagata aagcgtccag cttcggcatt aataaagttt
    14701 gtgcggcgtt ataaaaaacc ggttcgagat tcttcggcag actggtcaac gtttcgttac
    14761 gcagcagttt cgccacgcct tgtggattga tatagagcgg aacgatgcca tcagtgggta
    14821 ttacatccac cattgccggg cgggttttat tcagtgtttg cagggcgtta ttaaccagcg
    14881 tgtcatcgag ggagaaaagc agcgttttgt tttgcatcgc cagcgacaca cggaaaaaat
    14941 aatccgacat taattgatcg ggttgcgccg cctgcgcttt cggatactga ccgtatcggg
    15001 aactcacttc gcgacaccag atttgcgctt cgccctgctg agtctggctt accggcaaaa
    15061 caccttctgg cgctttgctt tcgtgcacac caatattttg cgtaaacagt ttccctggca
    15121 attgcgcctg ttcggcagtg ccatcaaact gaccgacaaa cagcggggtt tgcaattttg
    15181 agtcttcata ccagcacagc cccgcggcac cgtctaacgc cccattcagc ttgtcgtttt
    15241 cctggctgat gtgcgaaagc atctcttcgg caataccgtg tgaatacggc accgccacac
    15301 agaagctggc tccggcaggc atactgttcc agaccggcgt aaaatcgaaa ctggcatcta
    15361 cgctggcgga ttcatcattt aacgccacaa aactgtgcca gccgtcgtta cccatttcga
    15421 agcgtacgcc agcaaaagaa ggcattaacc gctggtagcc aaaacccagc aacctggcgc
    15481 tggccacgat gcgcaggcgt actggcgttt tttcggcagt acgctcttcc aggccaaagc
    15541 tggcttgcca gcgttttttg ccgctcaaca aatcacttgc gatcgccgtg gcttcggtat
    15601 cctgctgatc atctttaaac aacatatccg tactggaaaa caccagcatc ttgtcctgat
    15661 atgtcgcgaa catcagggcg ttattgccgt tatagcgcaa ctgataaaca ggaatagttt
    15721 cactatttat cttgatgcta ctgatttccg ttttgcttaa ctggctgtcg ctggtagcgg
    15781 caaacaacaa tggctccagc agtttgctta aaccactgcg ctggatcagc accatgtaat
    15841 gtgaaagatg gccttgttta tcgtgccata gcgccgcctg cgcgggctga tctaagagtg
    15901 acgaaaagag cttatctttc agcgtgagat cgtgttcata gacaatgcgg cgaatgctgc
    15961 cttcaatgcc cagacgatcg gcatgattct gataatagaa aacgaaatct tcgctcagaa
    16021 catcgtggag aaacggaatg gtgaggagat ctttggaaag ctggctcaga gagtcgctgt
    16081 cgagaaagag gtccggctca ttaagatcga tttgcagatt gttgtgcacc accagcggcg
    16141 acaacgtttt ttctggccca ctgccagcat attgcaacgc ccagacgcca gcggaaagca
    16201 gtgctattgc gcctaaacct acaagaccat agaaccgcca gcctttcgcc tttttttcac
    16261 cactcattgc cacattcctt gtgtatagcc agccattttt tacgggcaca gccaaacttt
    16321 accgcgccct aatacgacaa aagcccagac tttgcagcct ggacttttca attcaaacaa
    16381 gggagatagc tccctttttg catgaagaag taaaattatt cttcttctgg ctcgtcgtca
    16441 acgtccactt ccggagcgat ttcatcgtcc ccttccgctg cactgccgtc gatggtatcc
    16501 agatcttcct cgtcaaccgg ttcagcaaca cgttgcagac ccactacgtt ttcatcttcc
    16561 gcagtacgga tgaggatcac gccctgggtg ttacggccca cgatgctgat ttctgaaacg
    16621 cgagtacgta ccagcgtacc ggcatcggtg atcatcatga tctggtcgca gtcatctacc
    16681 tgcaccgcgc caaccactaa accgttacgt tcggtaacct tgatggagat aacccctttc
    16741 gtcgcacgcg acttagtcgg gtattccgcc actgcggtac gtttaccata accgttctgc
    16801 gttgcggtga ggattgcgcc atcgccacga ggcacgatca gagagacgac tttatcgcct
    16861 tcgcctaaac gaataccgcg aacaccggtg gtgttgcagc ccatcgcacg gacagaagac
    16921 tctttaaagc gcaccacttt accttcggcg gagaacagca ttacttcgtc ttcgccgctg
    16981 gtcaggtcaa cgccgatcag ctcatcgcct tcaaccagtt tgatcgccac tttaccggcg
    17041 gtacgcagac ggttgaattc ggtgaggacg gttttcttca cagtaccgtt agcggtcgcc
    17101 atgaagactt tcacgccttc ttcaaactcg gtcaccggca ggatcgcggt gatacgttcg
    17161 tcctgctcca gcggcagcag gttgacgatc ggacgaccgc gcgcgccacg agtggcctcc
    17221 ggcaactggt aaactttcat cgaatagacg cgaccacggc tggagaagca cagaatatgg
    17281 tcgtgcgtgt tcgccaccag cagtcggtcg ataaagtctt cttctttaat acgtgcggca
    17341 gatttacctt tcccgccacg acgctgcgct tcgtattcag aaagcggctg atatttaacg
    17401 tagccctggt gagagagcgt cacgaccaca tcttcctggg tgatcagatc ttccaagttg
    17461 atgtctgcgc tgttggcggt gatttcagta cgacgtttgt caccgaactg ttcacgaacc
    17521 agctccaact cttcacggat cacttccatc agacgatcgg cgctaccaag aatacgcagc
    17581 agttccgcga tctgatccag cagctctttg tattcgtcga gcagtttttc gtgctcaagg
    17641 ccggtcagtt tctgcaaacg cagatccaga atcgcctgag cttgctgttc ggtcaggtag
    17701 tacagaccgt cacgcacgcc gaactcaggc tccagccatt ccggacgcgc agcatcgtcg
    17761 ccagcacgtt cgagcatcgc ggcaacgttg cccagctgcc acggattagc aaccagcgca
    17821 gttttcgctt ctgcaggcgt cggcgcatga cggatcagtt cgatgatcgg gtcgatgttc
    17881 gccagcgcca cggctaatgc ttcaaggata tgagcacgat cgcgagcttt acgcagttcg
    17941 aaaatagtac gacgggtcac cacttcacgg cggtgacgaa caaacgccgc gatgatgtct
    18001 ttcaggttca tgatcttcgg ctgaccatgg tgcaatgcca ccatgttgat accgaaagaa
    18061 acctgcaact gggtctggga gtagaggttg ttgagcacaa cttcaccgac cgcatcgcgt
    18121 ttaacttcaa tcacgatgcg cataccgtct ttgtcagact cgtcacgcag cgcgctgatg
    18181 ccttccacgc gtttttcttt taccagttcc gcaatcttct cgatcagacg cgctttgttc
    18241 acctgatacg gaatttcgtg gacgataatg gtttcacgac cggttttgcc gtcaacttcc
    18301 acttcagcac gggcgcggat atataccttg ccgcgaccgg tacggtaagc ttcttcaata
    18361 ccgcgacgac cgttaatgat tgccgccgtc gggaagtccg gccccgggat gtgttccatc
    18421 agcccttcaa tgctgatgtc ttcatcatcg atatacgcca gacaaccgtt gatgacttcc
    18481 gtcaggttgt gcggcgggat gttggttgcc atacctacgg cgataccgga agaaccgttc
    18541 accagcaggt taggaatttt ggttggcatg acgtcgggaa ttttttccgt gccgtcatag
    18601 ttatcaacga aatcgaccgt ctctttttcg agatcggcca tcagttcatg ggcaattttc
    18661 gccagacgga tttccgtata acgcattgcc gccgcagagt cgccgtcgat ggaaccgaag
    18721 ttaccctgac cgtctaccag catgtaacgc agcgagaatg gctgcgccat acggacgatc
    18781 gtgtcataaa ccgccgagtc accatgggga tggtatttac cgattacgtc accaacgaca
    18841 cgggcagatt ttttataggc tttgttccag tcattgccta gtacgttcat ggcgtaaagt
    18901 acgcgacggt gtaccggctt caggccatct cggacatctg gcagcgcacg gccaacaatg
    18961 accgacatcg cataatccag ataggagctc ttcagctctt cctcaatgtt gaccggtgta
    19021 atttctctcg caaggtcgct catctaaccg ctatccctct actgtatccc ggattcaaag
    19081 gtcgcaaatt ataacacagc cgcgcagttt gaggtaaacc tatacgcttt attcacatcc
    19141 aatgcctgat atactcgttt gtcttgccaa ttacggagta gaagtgccaa tgaatgccga
    19201 aaaatcgccg gtaatccata acgtagacca cgaagagatc gctaaatttg aagccgtcgc
    19261 ctcccgctgg tgggatcttg aaggtgagtt caaaccgttg caccgcatta acccgctgcg
    19321 tctgggctat attgccgagc gtgctggcgg tttatttggc aaaaaggtgc tcgatgtcgg
    19381 ttgtggcggc ggcattctgg ccgagagtat ggcgcgcgaa ggcgcgacgg tgaccggtct
    19441 ggatatgggc tttgagccat tgcaggtggc aaagctgcac gcactggaaa gcggcattca
    19501 ggtggattac gtgcaggaaa ccgtggaaga gcacgcggca aaacatgccg ggcagtatga
    19561 tgtggtgacc tgcatggaga tgctggagca cgtccccgat ccgcagtcag tggtcagagc
    19621 ctgtgcgcaa ctggtgaaac caggcggcga tgtctttttc tcgacgctta accgtaacgg
    19681 caagtcgtgg ctgatggcgg tggttggtgc tgaatatatt ttgcgcatgg tgcccaaagg
    19741 cacgcatgat gtgaagaagt ttattaaacc ggcagagctg cttggctggg tagatcagac
    19801 aagccttaaa gagcgacata taaccgggct acattacaac ccgatcacta atacttttaa
    19861 actcggcccc ggcgtggatg tgaactatat gctgcacacg cagaataagt gaggttgttg
    19921 tttggattca tccggcaacc gcgccaatgc ctgatgcgac gcttgccgcg tcttatcagg
    19981 cctacaaatg ctctccgtag gccagataag gcgtttacgc cgcatccggc aatagtgatg
    20041 gtcagacagc gattaccatt tcaccgtcat cgacaaaaac cctgccgtct gggcaaaatc
    20101 atcactccct ttctgccacg ccacgctgcc gcgcagggac actcgctgac tgatattgcc
    20161 cgtgactccc acttttattt caccccgttg cttcaccgca tcgtcactga tagtgctgcc
    20221 atcctcttca atttccgtcg aatggggatc gtgataataa ttcagatcta atgttggtat
    20281 gacatgaaca gcggtacgcc attcgctgtg taaacccagc cgcgtctgaa tatcatcacc
    20341 ctgcgattgt gacacgcgcg cacggttagc ggcggtaaaa tcatcctgct gcacgccctg
    20401 ataaatcacc tgcgcctgcg gttcaatcac cacaccacgc tccggtaacc actgataccc
    20461 cgcctccagc gaggcgataa tccccgacga gtagtaatga tctgtgccat cgtcttgttc
    20521 ggaaacatca ttgttaaacc acgcgtattg cagccagcta tccagccagg ccccctgctt
    20581 ctgattaccg tgctgatacc agcttgaggt cagcccaacg gcataaccgt ggttctggct
    20641 atcggcgcga gttccggtca tattcgagcg gctgtcgccc tgattatcac tgtagccacc
    20701 tacaatccca agcatccact cgccatcatc gccccagcgc ccgctaaaca ggtcaccgct
    20761 aagctgcacc gtagaagtgt cttcatgctg agccagttgc cctgccgccg tgtaatgata
    20821 acgtccgccg ataacacgta aattcagcgt ctgaccattg ccacctgcat gatcgcgtcg
    20881 ctccatcata aacgcctgat ttgccgcccg cagattattg agataaccgc caactttggc
    20941 attcagcacc ggctggtaag cggggattgg atcgggtgtt gggtcaggat cgggtgttgg
    21001 gtccgggtct ggatcaggtg gcgatggcgg cgttacttct tgcgatcgca gataccagtc
    21061 gttgttatct tccaccagcg tgtagtcata cgctcccata ttgacgtagc cgctgcctgc
    21121 cagactgaac tgcgcattgt tttgaaactg cgtgggatca gctgcgaaat caaccacttt
    21181 aatgcctgtc gatgtcggct caccaatccc ggtaatgggg ttaaccacca cagtcgtgtt
    21241 gccagcagta ttaccgttca tcaccagttg gtcgcttgct gagtcatcgc cgtttaattc
    21301 gctgtcgaac agtagcgtac cgccgccggt ataatcacca tttaccgtca gcgtatcgcc
    21361 agcgacgcca ttttgcaggc taaccgcacc ggacgtattg gtcagatcac cattaaccgt
    21421 cacgtcggca agataggtca ggctgtcagt ttcaaggttg gtattaagct cacctgtcaa
    21481 cgtcacgcca tcggtagcat tcaccagcgt cccatcgccg ttaaacaatg aggcattaag
    21541 ggcgacggaa gtatcctgcc cggtcagacg caaaaccgta ccatcgctga tatcgatagt
    21601 gccgctggaa gtagcatcga tagactgaat atcctgatcc gcgccagtaa cgaacgtcgc
    21661 cccatcaccg acccacagtg acgaagcata aggaaagata tccgcaacat cgcctttcag
    21721 ggtgccttct tcgacacgta ctgccgactg cgttgtaccg ctggcggtca gctccagcgt
    21781 acccgccccc gttttcgtca atgtgctacc ctcatcctga tgctgcccgc tgctgtcagc
    21841 catcagtgcg ccccactgcg tgtctacccc cgcatcaact gccacttcac cgtcggcgcg
    21901 catttcaata tcacgcccat gctcagtcgt cgtagagcga gtatcgacat tggcagtaat
    21961 ctccatcacg ctttcttgtt gattatcggt aaagataacc tggcggttat agtgggtatc
    22021 tccaagctgt gagttgtcgc tcacctccag cataccggag gcgatttgtg ttgtgcccaa
    22081 ataactatta ttgtttgcca gacttacctg cccgtcgccc gcatcgacca ccacgtagac
    22141 gccatctttc ccgtcaccgc cgatatgcat atcgtttcca cctgcaagat ctaccacatc
    22201 ctgactgccg ataaccgttc cgctgctgcc gctgacttca aggccatcgt tgtatgatgt
    22261 gccactctgc caggtggaga aatcagagag atcgagcaca ccgccgttta acacgatcga
    22321 ctgcggatcg tcctggagag cggtaagatc tgccgcgtcg ccttccagcg aaagcaccgc
    22381 accatcatca acgactatat cgccggttag cgccatcgac tgcgcccctg ccagcacgta
    22441 gctgccgttt tgcgcaatgc ctgaaaggct ttgcctgctg gcgtgacaac tcgctttgat
    22501 atcatatccc tggcataaat caatggccgc cgcgaaaccg ttagcagaga aaagagatgc
    22561 aatcattgac gggagtagag ataaatactc cttgcgtaga aagataatcc gcatattaat
    22621 ctgaccatca ttttatataa aacggcatat ttaaacgcat tatacaatat gggttatctt
    22681 tcttttgtaa attgtccaac ccgatgcaat ggctattttg ttattatttg atgaataata
    22741 tcagtgcgtc ataattcaag ttaataacct taaggaatac cagttatatt taaactaaat
    22801 taaagtaatg aataattttc ttataatata aggtaaatta acaaaatggc ttcgcattta
    22861 acaataaccg aatagaaaac aaccatttcg acatcaacaa tcgcttacat tcgcttatat
    22921 attgaccaca actgatacat cagattatgt gatgacttgt gcttagatca atttttgcaa
    22981 tcattagcaa aaagattaat aaaccatcta tatcaattta tccaacctat tctgccgttc
    23041 aagaaatcgc cgaacagtta tttttaacaa atttttctct tcccattgac tttcccggac
    23101 accttgtctg acctaaggtg cgcgaaagcc actttttcct tcctgagtta tccacaaagt
    23161 tatgcacttg caagagggcc attttcacac tatcttgcag tgaatcccaa acataccccc
    23221 tatatatagt gttctaagca gcttcccgta ctacaggtag tctgcatgaa actattgcgg
    23281 aaagaattcc aaaaacaggt acgacataca tgaatcagaa tctgctggtg acaaagcgcg
    23341 acggtagcac agagcgcatc aatctcgaca aaatccatcg cgttctggat tgggcggcag
    23401 aaggactgca taacgtttcg atttcccagg tcgagctgcg ctcccacatt cagttttatg
    23461 acggtatcaa gacctctgac atccacgaaa ccattatcaa ggctgccgca gacctgatct
    23521 cccgtgatgc gccggattat cagtatctcg ccgcgcgcct ggcgatcttc cacctgcgta
    23581 aaaaagccta cggccagttt gagccgcctg cgctgtacga ccacgtggtg aaaatggtcg
    23641 agatgggcaa atacgataat catctgctgg aagactacac ggaagaagag ttcaagcaga
    23701 tggacacgtt tatcgatcac gaccgtgata tgaccttctc ttatgctgcc gttaagcagc
    23761 tggaaggcaa atatctggta cagaaccgcg tgaccggcga aatctatgag agcgcccagt
    23821 tcctttatat tctggttgcc gcgtgcctgt tctcgaacta cccgcgtgaa acgcgcctgc
    23881 aatatgtgaa gcgtttttac gacgcggttt ccacatttaa aatttcgctg ccgacgccaa
    23941 tcatgtccgg cgtgcgtacc ccgactcgtc agttcagctc ctgcgtactg atcgagtgcg
    24001 gtgacagcct ggattccatc aacgccacct ccagcgcgat tgttaaatac gtttcccagc
    24061 gtgccgggat cggcatcaac gccgggcgta ttcgtgcgct gggtagcccg attcgcggtg
    24121 gtgaagcgtt ccataccggc tgcattccgt tctacaaaca tttccagaca gcggtgaaat
    24181 cctgctctca gggcggtgtg cgcggcggtg cggcaacgct gttctacccg atgtggcatc
    24241 tggaagtgga aagcctgctg gtgttgaaaa acaaccgtgg tgtggaaggc aaccgcgtgc
    24301 gtcatatgga ctacggggta caaatcaaca aactgatgta tacccgtctg ctgaaaggtg
    24361 aagatatcac cctgttcagc ccgtccgacg taccggggct gtacgacgcg ttcttcgccg
    24421 atcaggaaga gtttgaacgt ctgtatacca aatatgagaa agacgacagc atccgcaagc
    24481 agcgtgtgaa agccgttgag ctgttctcgc tgatgatgca ggaacgtgcg tctaccggtc
    24541 gtatctatat tcagaacgtt gaccactgca atacccatag cccgtttgat ccggccatcg
    24601 cgccagtgcg tcagtctaac ctgtgcctgg agatagccct gccgaccaaa ccgctgaacg
    24661 acgtcaacga cgagaacggt gaaatcgcgc tgtgtacgct gtctgctttc aacctgggcg
    24721 caattaataa cctggatgaa ctggaagagc tggcaattct ggcggttcgt gcacttgacg
    24781 cgctgctgga ttatcaggat tacccgatcc cggccgccaa acgtggagcg atgggtcgtc
    24841 gtacgctggg tattggtgtg atcaacttcg cttactacct ggcgaagcac ggtaaacgct
    24901 actccgacgg cagcgccaac aacctgacgc ataaaacctt cgaagccatt cagtattacc
    24961 tgctgaaagc ctctaatgag ctggcgaaag agcaaggcgc gtgcccgtgg tttaacgaaa
    25021 ccacttacgc gaaagggatc ctgccgatcg atacctataa gaaagatctg gataccatcg
    25081 ctaatgagcc gctgcattac gactgggaag ctctgcgtga gtcaatcaaa acgcacggcc
    25141 tgcgtaactc cacgctttct gctctgatgc cgtccgagac ttcttcgcag atctctaacg
    25201 ccactaacgg tattgaaccg ccgcgcggtt acgtcagcat caaagcgtcg aaagacggta
    25261 ttctgcgcca ggtggtgccg gactacgagc acctgcacga cgcctatgag ctgctgtggg
    25321 aaatgccggg taacgatggt tatctgcaac tggtaggtat catgcagaaa tttatcgatc
    25381 agtcgatctc tgctaacacc aactacgatc cgtcacgttt cccgtcagga aaagtgccga
    25441 tgcagcagtt gctgaaagac ctgctcaccg cctacaaatt cggggtcaaa acgctgtatt
    25501 atcagaacac ccgtgacggc gctgaagacg cgcaggacga tctggtaccg tcaatccagg
    25561 acgatggctg cgaaagcggc gcatgtaaga tctgatattg agatgccgga tgcggcgtaa
    25621 acgccttatc cggcctacgg ctcggtttgt aggcctgata agacgcgcca gcgtcgcatc
    25681 aggctccggg tgccggatgc agcgtgaacg ccttatccgg cctacggctc ggatttgtag
    25741 gcctgataag acgcgccagc gtcgcatcag gcacaggatg cggcgtaaaa tgccttatcc
    25801 ggcattaaac gcccaacagg acacactcat ggcatatacc accttttcac agacgaaaaa
    25861 tgatcagctc aaagaaccga tgttctttgg tcagccggtc aacgtggctc gctacgatca
    25921 gcaaaaatat gacatcttcg aaaagctgat cgaaaagcag ctctctttct tctggcgtcc
    25981 ggaagaagtt gacgtctccc gcgaccgtat cgattaccag gcgctgccgg agcacgaaaa
    26041 acacatcttt atcagcaacc tgaaatatca gacgctgctg gactccattc agggtcgtag
    26101 cccgaacgtg gcgctattgc cgcttatttc tattccggaa ctggaaacct gggtagaaac
    26161 ctgggcgttc tcagaaacga ttcattcccg ttcctatact catatcattc gtaatatcgt
    26221 aaacgatccg tctgttgtgt ttgacgatat cgtcaccaac gagcagatcc agaaacgtgc
    26281 ggaagggatc tccagctatt acgatgagct gatcgaaatg accagctact ggcaccttct
    26341 gggcgaaggt acccacaccg ttaacggtaa aactgtgacc gttagcctgc gcgagctgaa
    26401 gaaaaaactg tatctctgcc tgatgagcgt taacgcgctg gaagcgattc gtttctacgt
    26461 cagctttgcc tgctctttcg cattcgctga acgcgaattg atggaaggca acgccaaaat
    26521 tattcgcctg attgcccgcg acgaagccct gcacctgacc ggcacccagc atatgctgaa
    26581 tctgctgcgc agcggcgcgg acgatcctga gatggcggaa attgccgaag agtgtaagca
    26641 ggagtgctat gacctgtttg ttcaggcagc tcaacaggag aaagactggg cggattatct
    26701 gttccgtgac ggttcgatga ttggtctgaa taaagatatt ctctgccagt acgttgaata
    26761 catcaccaat atccgcatgc aggcagtcgg tttggatctg ccgttccaga cgcgctccaa
    26821 cccgatcccg tggatcaaca cttggttggt gtctgataac gtgcaggttg ctccgcagga
    26881 agtggaagtc agttcttatc tggtcgggca gattgacgcg gaagtggaca ccgacgattt
    26941 gagtaacttc cagctctgat ggcccgcgtt accctgcgca tcactggcac acaactgctg
    27001 tgccaggatg aacaccattc ccttctggcg gcgctggaat cccacaatgt ggcggttgag
    27061 taccagtgcc gcgaaggtta ctgcggttcc tgtcgcacgc gccttgttgc aggccaggtg
    27121 gactggattg ccgaaccgtt agcctttatt cagccggggg aaattttgcc ctgttgttgc
    27181 cgggcaaaag gcgatattga aatcgagatg tgaattggtt gtagtgccag atacaacgct
    27241 tatacgtctt atctggccta caacgattac atggcgtagt aatacgcttt cacctgctcc
    27301 cagtccgctt tggggattgg ctccagatat ttttccagct ggcggaagtc atgattaatc
    27361 gctttattgc gacgcaagcg gcgacgactt ttctccaggt caagaaaacc agcttctgct
    27421 ttaccttctg ttttcacata gatatggcga acataacaac agccatgctg acgattaacg
    27481 ctatgcattt tcttaaaacg ccagtgccac tgctttcaac atggcttgcc gtacttcgtc
    27541 agaatagggc gatactgcat gccgggcata ccagtcagca atgctgatga accccgccat
    27601 atcttcagtc accaacaacg cgcgccattc accctcaatt ttcaccgctt caccaaaaac
    27661 gatcttcggc acgatgacac cggcccgttc cagttcttta attaccgcaa cctcacggac
    27721 aatcgttggt cggccgaacg gataacgtac agaatgaaac agatgatgcg tcatgcgctt
    27781 tacatacagc tttttgccgt tgcgctcgac gcattgcacc ccgctcatac cattacggcg
    27841 atagttaggc tcttcaaccc agtcgccctc tgttgcccac cagtgattaa attcgtcgta
    27901 ctttgctgaa actgccatac cctatcgcct gtcattttta ttaacgacaa tgactatagg
    27961 tggttacctg aggaaaatct taatgaaacg tgtcgtatta atgaatttct tttgcc
//
LOCUS       DAJVTL010000051        27927 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.051, whole genome shotgun sequence.
ACCESSION   DAJVTL010000051 DAJVTL010000000
VERSION     DAJVTL010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27927
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.051"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(188..589)
                     /gene="nikR"
                     /locus_tag="OQQ26_002048"
     CDS             complement(188..589)
                     /gene="nikR"
                     /locus_tag="OQQ26_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HCS1857504.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
                     TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
     gene            complement(595..1401)
                     /gene="nikE"
                     /locus_tag="OQQ26_002049"
     CDS             complement(595..1401)
                     /gene="nikE"
                     /locus_tag="OQQ26_002049"
                     /EC_number="7.2.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikE"
                     /protein_id="HCS1857505.1"
                     /translation="MTLLNVCDLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
                     GRSGCGKSTLARLLVGLESPSQGNISWCGESLAKLNRAQRKAFRRDIQMVFQDSISAV
                     NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
                     CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
                     CQRVMVMDNGQIVETQAVGDKLTFSSDAGRVLQNAVLPTFPVRRRTSEKV"
     gene            complement(1398..2162)
                     /gene="nikD"
                     /locus_tag="OQQ26_002050"
     CDS             complement(1398..2162)
                     /gene="nikD"
                     /locus_tag="OQQ26_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikD"
                     /protein_id="HCS1857506.1"
                     /translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
                     TCAATLGILPAGVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHA
                     RETCLALGKPADDATLTAAIEAVGLENAARVMKLYPFEMSGGMLQRMMIAMAVLCESP
                     FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
                     IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS"
     gene            complement(2162..2995)
                     /gene="nikC"
                     /locus_tag="OQQ26_002051"
     CDS             complement(2162..2995)
                     /gene="nikC"
                     /locus_tag="OQQ26_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikC"
                     /protein_id="HCS1857507.1"
                     /translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSR
                     LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
                     VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
                     RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVT
                     APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLMGDALRDHLDPHLVTEHA
                     H"
     gene            complement(2992..3936)
                     /gene="nikB"
                     /locus_tag="OQQ26_002052"
     CDS             complement(2992..3936)
                     /gene="nikB"
                     /locus_tag="OQQ26_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikB"
                     /protein_id="HCS1857508.1"
                     /translation="MLRYVLRRFLLLTPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
                     PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
                     ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
                     YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDIAGQRHVTWARLRGLND
                     KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
                     IQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
     gene            complement(3936..5510)
                     /gene="nikA"
                     /locus_tag="OQQ26_002053"
     CDS             complement(3936..5510)
                     /gene="nikA"
                     /locus_tag="OQQ26_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HCS1857509.1"
                     /translation="MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
                     TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSENGKTWTFTLRDDVKFSNGEPFD
                     AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
                     FRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITF
                     NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
                     TAKAPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
                     QKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
                     VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
                     PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
                     PIATEIPFEQIKPVKP"
     gene            complement(5621..6208)
                     /gene="acpT"
                     /locus_tag="OQQ26_002054"
     CDS             complement(5621..6208)
                     /gene="acpT"
                     /locus_tag="OQQ26_002054"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HCS1857510.1"
                     /translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
                     LSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
                     WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
                     LSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN"
     gene            complement(6263..7312)
                     /locus_tag="OQQ26_002055"
     CDS             complement(6263..7312)
                     /locus_tag="OQQ26_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HCS1857511.1"
                     /translation="METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFA
                     IVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT
                     RKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVF
                     MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELM
                     GVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIG
                     NILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
                     AILLGPGRPKSRLPG"
     gene            7444..8661
                     /locus_tag="OQQ26_002056"
     CDS             7444..8661
                     /locus_tag="OQQ26_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417930.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857512.1"
                     /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYV
                     HDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLT
                     AGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
                     GAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRQTVKASKGKPLPFRAVLG
                     RVWLYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGIN
                     RIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVP
                     QQNQGAALATYTVFMDLSLGVTGPLAGLVVSWAGVPVIYLAAAGLVAIALLLTWRLKK
                     RPPEHVPEAASSS"
     gene            complement(8665..9222)
                     /gene="dcrB"
                     /locus_tag="OQQ26_002057"
     CDS             complement(8665..9222)
                     /gene="dcrB"
                     /locus_tag="OQQ26_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage sensitivity protein DcrB"
                     /protein_id="HCS1857513.1"
                     /translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVN
                     LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
                     LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
                     ITLPADDQQKAQTTAENIINTLVIQ"
     gene            complement(9295..9960)
                     /locus_tag="OQQ26_002058"
     CDS             complement(9295..9960)
                     /locus_tag="OQQ26_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HCS1857514.1"
                     /translation="MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
                     HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
                     IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
                     QAS"
     gene            10181..10426
                     /gene="tusA"
                     /locus_tag="OQQ26_002059"
     CDS             10181..10426
                     /gene="tusA"
                     /locus_tag="OQQ26_002059"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HCS1857515.1"
                     /translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMHPGETLLIIAD
                     DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
     gene            complement(10528..12726)
                     /gene="zntA"
                     /locus_tag="OQQ26_002060"
     CDS             complement(10528..12726)
                     /gene="zntA"
                     /locus_tag="OQQ26_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase
                     ZntA"
                     /protein_id="HCS1857516.1"
                     /translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSSPTLSEN
                     VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
                     AVQKAGYSLRDEQSADEPQASRLKENLSLITLIVMMAISWGLEQFNHPFGQLAFIATT
                     LVGLYPIARQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
                     WAASRARQGVSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
                     SPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGANAIDRILKLIE
                     EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
                     PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTA
                     IHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAELAIPTAESQRALVGSGIEA
                     QVNGERVLICAAGKHPADAFAGLINELESAGQTVVLVVRNDEVLGIIALQDTLRADAA
                     TAISELKALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEDKVKAVTKLNQHAPLA
                     MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
                     RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
     gene            complement(12800..13426)
                     /locus_tag="OQQ26_002061"
     CDS             complement(12800..13426)
                     /locus_tag="OQQ26_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HCS1857517.1"
                     /translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
                     AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL"
     gene            13567..13923
                     /locus_tag="OQQ26_002062"
     CDS             13567..13923
                     /locus_tag="OQQ26_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HCS1857518.1"
                     /translation="MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVV
                     SNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKG
                     TLSYKGTRFVSFVGEQ"
     gene            complement(13926..14195)
                     /locus_tag="OQQ26_002063"
     CDS             complement(13926..14195)
                     /locus_tag="OQQ26_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HCS1857519.1"
                     /translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
                     GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFKVKK"
     gene            complement(14185..14781)
                     /gene="rsmD"
                     /locus_tag="OQQ26_002064"
     CDS             complement(14185..14781)
                     /gene="rsmD"
                     /locus_tag="OQQ26_002064"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HCS1857520.1"
                     /translation="MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
                     NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
                     ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
                     ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
     gene            14931..16424
                     /gene="ftsY"
                     /locus_tag="OQQ26_002065"
     CDS             14931..16424
                     /gene="ftsY"
                     /locus_tag="OQQ26_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HCS1857521.1"
                     /translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEP
                     VKASEQAIEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPESVVEETP
                     EPVAIEREELPLPEDVNAEEVSPEEWQAEAETVAIVEAAEEAAKEEITDEELEAQALA
                     AEAAEEAVMVVPPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
                     RGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG
                     EILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRA
                     AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH
                     LMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
                     TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            16427..17095
                     /gene="ftsE"
                     /locus_tag="OQQ26_002066"
     CDS             16427..17095
                     /gene="ftsE"
                     /locus_tag="OQQ26_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HCS1857522.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
                     VGHE"
     gene            17088..18146
                     /gene="ftsX"
                     /locus_tag="OQQ26_002067"
     CDS             17088..18146
                     /gene="ftsX"
                     /locus_tag="OQQ26_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HCS1857523.1"
                     /translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
                     VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
                     TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
                     ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
                     GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
                     ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTKFDINGLSFDECLLLLLVCSMIG
                     WVAAWLATVQHLRHFTPE"
     gene            18391..19245
                     /gene="rpoH"
                     /locus_tag="OQQ26_002068"
     CDS             18391..19245
                     /gene="rpoH"
                     /locus_tag="OQQ26_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HCS1857524.1"
                     /translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            19516..20619
                     /gene="livJ"
                     /locus_tag="OQQ26_002069"
     CDS             19516..20619
                     /gene="livJ"
                     /locus_tag="OQQ26_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid ABC transporter
                     substrate-binding protein LivJ"
                     /protein_id="HCS1857525.1"
                     /translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
                     EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
                     PQRIAIVHDKQQYGEGLARAVQDALKKGNANVVFFDGITAGEKDFSTLVARLKKENID
                     FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
                     QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
                     VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
     gene            complement(20818..21201)
                     /gene="panM"
                     /locus_tag="OQQ26_002070"
     CDS             complement(20818..21201)
                     /gene="panM"
                     /locus_tag="OQQ26_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HCS1857526.1"
                     /translation="MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
                     NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGV
                     EDRGVMTAFMQALGFTAQQGGWEKR"
     gene            21625..22734
                     /gene="livK"
                     /locus_tag="OQQ26_002071"
     CDS             21625..22734
                     /gene="livK"
                     /locus_tag="OQQ26_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter substrate-binding protein LivK"
                     /protein_id="HCS1857527.1"
                     /translation="MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDM
                     EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK
                     PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENID
                     FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD
                     QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA
                     NTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK"
     gene            22782..23708
                     /gene="livH"
                     /locus_tag="OQQ26_002072"
     CDS             22782..23708
                     /gene="livH"
                     /locus_tag="OQQ26_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010436488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivH"
                     /protein_id="HCS1857528.1"
                     /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
                     EVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNS
                     KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVI
                     WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
                     AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLS
                     TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
     gene            23705..24982
                     /gene="livM"
                     /locus_tag="OQQ26_002073"
     CDS             23705..24982
                     /gene="livM"
                     /locus_tag="OQQ26_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid ABC transporter
                     permease LivM"
                     /protein_id="HCS1857529.1"
                     /translation="MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDSASDVR
                     WQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVA
                     WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
                     GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
                     PNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSL
                     FVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQ
                     GFVSPESFTFAEPAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG
                     LMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA"
     gene            24979..25746
                     /gene="livG"
                     /locus_tag="OQQ26_002074"
     CDS             24979..25746
                     /gene="livG"
                     /locus_tag="OQQ26_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivG"
                     /protein_id="HCS1857530.1"
                     /translation="MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGK
                     TTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGAVRTFQHVRLFREMTVIENLL
                     VAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
                     RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
                     GISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA"
     gene            25748..26461
                     /gene="livF"
                     /locus_tag="OQQ26_002075"
     CDS             25748..26461
                     /gene="livF"
                     /locus_tag="OQQ26_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivF"
                     /protein_id="HCS1857531.1"
                     /translation="MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGK
                     TTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
                     MGGFFAERDQFQERIKWVYELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLL
                     LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLS
                     DTGDALLANEAVRSAYLGG"
     gene            26579..27325
                     /locus_tag="OQQ26_002076"
     CDS             26579..27325
                     /locus_tag="OQQ26_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857532.1"
                     /translation="MHYAVVVMLDLLCCIHAYRSGQERYWIFIIFCFPVIGCVAYFVM
                     VMLPETGADRHGRTLLMRLQDKISPERHLHKLGEELAIAETNQNHYALANELARLGRY
                     YDAVLHYQQALRGVSVHEAAMMLSLAQAQFAIQEFAACQQTLEDVMCYNPDFQSADGH
                     LLFARTLAAQEKYADAESEFEVLVSYYPGPQVRIYYAEMLAKLSRLREANEQYAAVVD
                     TAKRSRAHYRKHHREWIKTANDRLKQSIVR"
     gene            27346..>27927
                     /locus_tag="OQQ26_002077"
     CDS             27346..>27927
                     /locus_tag="OQQ26_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HCS1857533.1"
                     /translation="MYTQQVEQSFKLLRENGIFITRGLTAAEIDAAEKRYNFKFPNDY
                     KALLIQGMPLYDYDFTDWRNLSDEYVEYIQYKMFDETISGILYCIDKFDAWPQAWGNR
                     PDNLEERLNFSREKIKKNPLFIPIKSNRYLALSPADSGNPVYSIHEGDDVICYGENLW
                     DYFTKMYVSEDECDIHINLKTMPEPFPAYNTFVY"
BASE COUNT         6557 a         7213 c         7761 g         6396 t
ORIGIN      
        1 tattatttta atgacagtat cttcatacga aaaagcgaag aaaaacttgt ggtcacaatg
       61 aattgaagat ttttaggaat atatttagaa cgttacaaaa gagaaggttc ggatagggta
      121 tttagagagg aatcaggtgt gctagtggcc ctttgttgat cgttcaccaa aggacccaat
      181 aatagactca atcttccttc ggcaggcact gcaaatgccc gtgccgcacg ccgcgctggg
      241 cgataacgtc atcggcaaaa tgctgcacgt cgcccatgtc acctttcagc acggcgattt
      301 ccagacagtc gtcgtggttg atgtgcacat gtagcgtggc gaccgagagg tcgtggtgat
      361 gatgctgggt ggagacaata cggctggcta agtcgcgttt ttcgtgttca tacacatacg
      421 acagcaccgc aaaaccttgt gtgccgtgct gctgggtagc ttcctgcgcc agggcgctac
      481 gcagaatatc gcggatagct tcggaacggt tgttataacc acgacgctgg ctcaggctgt
      541 ccagcgtctc cagtaaatcg tcatcaagcg tgatggtgac tcgttgcatt tgcgttaaac
      601 cttttctgag gtgcgacggc gcacggggaa tgtgggtaat accgcgtttt gtagcacacg
      661 tccggcgtca gaggaaaagg ttaatttatc tcccaccgcc tgggtttcga cgatttgtcc
      721 gttgtccatc accatcactc gctggcaaaa gcgttccacc aggcgtaagt catgagtgat
      781 gaacaggcag gcagtgccaa actgttgttg tagctttttc agcaggcgaa tgacgcccgc
      841 ctgtaacacg agatcaaggt tagacacggc ttcatccaga atcagcagtt tcggttcgac
      901 cgccagcgcg cgagccaggc agactcgctg gagctggccg ccgcttaact gcggtgggcg
      961 cttgtcgagc acgctgtcgt cgagatcgac cgccttcagc atttcgctgg cgcgcgccag
     1021 ttgttcggat tttttcagtg atagcaggtg gcgcatcggt tcacgcagga tctcgcgcac
     1081 ggttttgcgc ggattcacgg cgctgatgga gtcctgaaat accatctgaa tatcacggcg
     1141 gaaggcttta cgttgggcgc gattaagttt cgccagcgat tcgccgcacc agctaatatt
     1201 cccttgtgag ggagactcta agcctaccag cagccgcgcg agggtgcttt ttccgcagcc
     1261 gctgcgtccc agcagggcga cggtttcgcc gcttttcagg gtcagggaaa cgttattcag
     1321 caccgcctgg tgctgatgtt ttccgctaaa tccaccgtgt gcatagtgat gggaaaggtc
     1381 gcagacgtta agtaaagtca tgatgccagc tccataccgt agagggcgag atgagcggaa
     1441 accaggctgc gcgtcaccgt atgtttgggg gcgttaaaca gcgtttctac atcgccctgt
     1501 tcgacaattt taccttgtga catcaccgcc acgtcatccg ccagacgcgc cacaacgccc
     1561 atatcatggg tgaccagcag cattcccggc gcttgttttt gcataatgct ttccagcaga
     1621 tcgaggatgc gcgcctgtgc tactacgtcg aggtcggtgg tcggttcatc ggcgatgata
     1681 aacggtgatt cacacagcac cgccatcgca atcatcatgc gctgcaacat gccgccgctc
     1741 atctcgaacg ggtacagctt catcacgcgt gcggcgtttt ccagccccac cgcttctatg
     1801 gcagcggtaa gcgtagcgtc atcggcgggt ttccctaacg ccaggcaggt ttcccgcgcg
     1861 tgggtgtgca tggtgtgcag tggattaaag gcgctgcgcg ggttctgcat gatggtggca
     1921 attttgatgc cgcgcagggc gcagggagaa accggtttgc catcggctaa aatttccccc
     1981 gccgtctggc gaacgcctgc gggcaaaatg cccagcgtcg cggcgcaggt cagtgatttc
     2041 ccgctgccgc taccgccgac taacgccagc acgcgcccac gttgcagggt taacgatacg
     2101 ccgtgcacca gcggctgcgc ggcctgtagc gcgatattac gtagttcaat ctgttgcggc
     2161 attagtgtgc gtgctccgtc accagatgag gatccagatg atcgcgcagt gcgtcaccca
     2221 tcaggttaaa ggccatcacg ctgataaaca gcgccagccc cggccagaac atttgcagcg
     2281 gctgggtcca gatatactgg cgcgcgtcgt taatcatcac gccccattcg gcggtcggtg
     2341 cggtcacgcc gaggccgagg aaggacatcc ccgcgacgtg cagcatcata tggccgatat
     2401 ccagcgttgc cagcaccagc agcgagggga tcaccgcacc tgccagatga tcaacaaaca
     2461 cccgcacatg gcccgcgcca gaaagccgtg acgccagcac aaactcgcgt tggcgtagcg
     2521 aaatcaccag gctgcgcacc atgcgcgcgt accacgccca gtgcgacagg gcgatggcga
     2581 taatcacgtt ggtcaacccg gtgccgagca cgccaaccat aaagaacgac agaatcgagg
     2641 tcgggaaggt cataaacata tcggcgacgc gcatggtggc ctgatcaacg cgtccgccaa
     2701 tcagtccggc gctgccgcca ataaccagcc ctaatgtcag caccagcagc aggcaggcca
     2761 ttaccgaacc gagcgacacg cgggtcgctg ccatcagccg cgagaaaata tcgcgaccta
     2821 agtgatcggt gccgagccag tgctgcgcat ccggcgaaag caggcgcgac ggcaaatcaa
     2881 ttgcctgtgg atcgtacggc agccaccact ggctggtgag cgcaatcagc gccagcaggg
     2941 cgataatgat cagcgccagg cgtaccgacc agcgggaaga gaggaaaaag ttcacgcgtg
     3001 cgctccttca tgacgacgaa tgcgcgggtc tagcgcggcg ttgagcaaat cgacaatcaa
     3061 attacagacc acaaaaacca ccaccatcat cagcgtaaag cactggatca ccggatagtc
     3121 acggttaaaa atcgccgaca ccgcatagcg cccgacgccc ggccaggcaa agatgttttc
     3181 gataatcatc gtcccgccaa tcagttcgcc gatgtgcatc cccacggcgg tgatcatcgg
     3241 cagcgaggca ttgcgcagaa tatggcggcg ttcggtctgt ttgtcgttca ggccgcgcag
     3301 acgcgcccag gtgacgtgac gctgaccggc gatgtccagc atactggcgc gcagtaaacg
     3361 cgcgttaatc gccagcgaca taaaggcaat ggaaaccgca ggcaaaatga tgtgctgcca
     3421 gccgccgtaa cccatcgcgg gtagccattg cagatacacc gaaaacgcca tcaccagtaa
     3481 aaacgccagc cagaagttag gcatcgacac gccaagaaac gcgatgaaac gtacggcgaa
     3541 atccggcaga cggtcgcgat ggcgcgccgc ccagataccg agcggtacgg aagtgagcag
     3601 aattaatact agcgccgcac ctgcaagttc cagcgtggcg ggcaggaagt tcagcatatc
     3661 gtccagtacc gggcgttggc tggcgaatga gataccaaag tcaagatgca gcgccttcca
     3721 caaccaggtg ccgtactgga cgtacagcgg ctgatccagc cccaacatgg tgcgggtaga
     3781 ggccagcatc tccggcgtcg gcggcaggtt agacagacgc agataatcga gcgccgggtc
     3841 gccggtaccg aggcgcagca tcagaaaaat gatcaccgag gcggcgagca ccatcggggt
     3901 cagcagcaga aagcggcgta atacgtaacg caacattaag gtttcaccgg tttaatctgt
     3961 tcgaacggaa tttcggtggc gatcggcgcg taggggatgt tacccagctc cggttttgat
     4021 accaccatca ttgagatgta actgataggc agataaaccg cctcgtcatg cagacgggtc
     4081 agaatgtcgc gatacagcgc ctgacgttgc gtttcgtcat gggtcgccag cacttcgccg
     4141 atctctttat caatcagcgg cttgtcggct aatccttgct gtgcctggaa gtcagcgtgc
     4201 gacggtacgc gcattgaact caggaaggcg tgtggatcgt atggcgcgcc ccaggtgcgg
     4261 tggaaaatca tgccaaaacg accgtcgcgc tgacgagcat agatactgct ctcttcttcg
     4321 ccaatcagcg agacatctgc gccaatctgg cgcatatcag cctgaatgat ttccgccatc
     4381 gatttgctta acgcatcggt gccgatgaac gacagttcaa tacgcagcgg ctgaccattt
     4441 ttctcgcgga tgtctttacc cgcaggcagc gtccaaccgg ctttttccag caacgctttc
     4501 gctttctgcg gatcgtactg gcgcggtttc aggccgaggt tggcgtaggg cacagaaggg
     4561 gcaaacaggg tgtcggcgac ctgctgggtg ccatacaacg cgttatcaat cagcgatttt
     4621 ttgttcaccg cgtaattaag agcttcccgt actgccagct cgttggtggg ggctttggcg
     4681 gtattgagtg ccagcatcac ggtttcgatc ggctgtgaca gttgggtgtg gtaagccggg
     4741 ttctggctaa agcgggcgaa ggtatcgagc ggtaataacc cttcgtttcc gtacagcagg
     4801 tcgatatcgc cagtttcaaa cgccaccgcg cgggtagtcg ggtccgggat gacgttaaaa
     4861 gtgatcttct taatcgccgg cttttcgccc cagtagtttt cgttacggac gaagacatcg
     4921 tactgattca gtttcgattc ctgcaaaatc cacggtccgg tgccaatcgg cgctttaatt
     4981 ccgttcatgg tttcatggtt tttaaactgc gagggggcga taaaacggaa agggcgcggc
     5041 agggccagtt cttgcaggaa aggatagtag gcgcttttca gggtgatttg cagctctgtt
     5101 ttactgagtg ctttaacatc aacaatctgg tttgccagct ccagccaggc gtgacgttga
     5161 cggttatcga gcactgcgcg gaagttttct gccgccgcct ctgcatcaaa cggttcgccg
     5221 ttagagaatt tcacgtcatc acgcagggtg aaggtccagg ttttaccatt ttccgaatgg
     5281 gtccagcttt ttgccagcca cgggatcacc gaaccgtctg cctgatattt caccaatggt
     5341 tcataaacca tgctctgggc gaacatctgg ttaggcgtgt aaaggtgcgg gtttagtggc
     5401 ccgacattca ccggccaggc ggtggtgatt tcatctggtg cagcggcatg gacgataaaa
     5461 gacgcacaag ccagcagcgc aaatagagtg cggcggagtg tggagagcat ggtaacccca
     5521 atggattaaa atagatggcg gaaataagta tgacgatttt aagtattcgt catacttatt
     5581 acctgttctg gatcaataga tgggcagtcg ggtgggcgga tcagttaact gaatcgatcc
     5641 attgcacact gtcggcggtg agcgtaaagg gggtgggggt gcagatcgca aggcttaaat
     5701 tttctagctg acaatggctg actgacagcg aggagtgata ggtgctatct acgctgacga
     5761 tttgccaggc gctgccgcca cgctgtttaa cgatggcttc tttgcgcgtc cagatgcgcc
     5821 agaacatttc cagttgctga tcaggatgca cggcgtccat ttcagcgtgt tccccgaggc
     5881 tgaacacggc gttcgccagc cagcgccagt tggcgcgcgg gcgaatcact tcgatatcgc
     5941 agccgacttc gccttcatcg ctcaacagca gagcgatatc gtcaccgcta tggcttaagt
     6001 tgaaccatag cggcgtttcc ggcgcgaatg ccggtttgcc ttgttcgcca tagatgatct
     6061 ccggtagcgg ggaaagcgtg tgcgaaagca atgcacgccc cgccagccag cgttcgcgtc
     6121 gtggaccttg cggtgcttgc tcgcgtaaac ccggtggcag tggagctgcg cttaaggtcg
     6181 aaactttccc cagaactatc cgatacatat cagggccaac gtttaatgga aaatgaaagt
     6241 gcgtatcgta tcacttgtcg cctcatcccg gtaaccgact tttcggtctg cctggcccca
     6301 gtaaaatcgc cagtttgcta ccgcctttgg tggtttccat ccagatttta cacacactgg
     6361 ttaatggcac cgaaagtagc atccctaccg ggccgagcag ccatccccaa attaacaatg
     6421 aaagaaatac caccatggtg gacatcccca ggcgatggcc catcatccgt ggctctaaaa
     6481 tattgccgat gaccatatgg accactaaaa acaatgcgcc gaccagaata cattcgtaaa
     6541 caccattaaa cagcagcacc tgaatcattg gcggtacggc ggaaattacc gcgccgatat
     6601 tgggcacgta gttgagcaaa aacgccagta ctgcccacat cagcgcaaac tgcaccccca
     6661 tcagctccag ccccagccag acgatgacac ctgtccataa actgagtagc gtcttcaatg
     6721 caagatagtg cgaaacgcct ttaagtgcgc ggtgtaatcc cgcgatgtga atctgtgggt
     6781 tattcagcgc aaaacgcatt ttgtaaggga cgtggcgcac ttcaaacagc ataaaaacta
     6841 cggtcatcac cagcaaaagc acgctcgcca ttgccccgga aagcccggtc attagcgctg
     6901 tggtgaaggt aaccactttt tccgagtcca tccgctgcag cattcgctcc ggcgacatat
     6961 gcaaattaag aaaaggcaac atctcctgca atttaaaaag tttgcgcgtc agctccttat
     7021 taaacttcgg cagcatagag ataaattcgt taaacgatgc cgccagtacg ccgaccagcg
     7081 cggttagtgc gatcagcatc accaccacta caatcgtaat ggcaacgggg cgttgtactc
     7141 cccgacgaat aaaccaggta acgagcgggt tgaggacgat ggcaaaaaac agcgccagta
     7201 acagctgcac aatgatatct gccgctgcgt gaatgcccgc gaggatcact accagcgagg
     7261 ccagcttgag cagaatgtgc atgcccgttt tatcgggttg aggggtttcc attggggctt
     7321 ccttgtgact ttttgtatta agtgtagcgg gagtcatgcc agcaatattc tgattcttac
     7381 tgctgatttt cacgtcagca catggtaaaa atgaaacact gttgtaaaaa tgtggtgatc
     7441 ctcatgcccg aacccgtagc cgaacccgcg ctaaacggat tgcgcctgaa tttgcgcatt
     7501 gtctccattg tcatgtttaa cttcgccagc tacctcacca tcgggttgcc gctcgctgta
     7561 ttaccgggct atgtccatga tgtgatgggc tttagcgcct tctgggcagg attggttatc
     7621 agcctgcaat atttcgccac cttgctgagc cgccctcatg ccggacgtta cgccgatttg
     7681 ctgggaccca aaaagattgt cgtcttcggt ttatgcggct gctttttgag cggtctgggg
     7741 tatctgacgg caggattaac cgccagtctg cctgtcatca gcctgttatt actttgcctg
     7801 gggcgcgtca tccttgggat tgggcaaagt tttgccggaa cgggatcgac cctatggggc
     7861 gttggcgtgg ttggctcgct gcatatcgga cgggtgattt cgtggaacgg cattgtcact
     7921 tacggggcga tggcgatggg tgcgccgtta ggcgtcgtgt tttatcactg gggcggcttg
     7981 caggcgttag cgttaatcat tatgggcgtg gcgctggtgg ccattttgtt agcgatcccg
     8041 cgtcagacgg taaaagccag taaaggcaaa ccgctgccgt ttcgcgcggt gcttgggcgc
     8101 gtctggctgt acggtatggc gctggcactg gcttccgccg gatttggcgt catcgccacc
     8161 tttatcacgc tgttttatga cgctaaaggt tgggacggtg cggctttcgc gctgacgctg
     8221 tttagctgtg cgtttgtcgg tacgcgtttg ttattcccta acggcattaa ccgtatcggc
     8281 ggcttaaacg tagcgatgat ttgctttagc gttgagataa tcggcctgct actggttggc
     8341 gtggcgacta tgccgtggat ggcgaaaatc ggcgtcttac tggcgggggc agggttttcg
     8401 ctggtgttcc cggcattagg tgtagtggcg gtaaaagcgg ttccgcagca aaatcagggg
     8461 gcggcgctgg caacttacac cgtatttatg gatttatcgc ttggcgtgac cggaccactg
     8521 gctgggctgg tggtgagctg ggcgggcgta ccggtgattt atctggcggc ggcgggactg
     8581 gtcgcaatcg cgttattact gacgtggcga ttaaaaaaac ggcctccgga acacgtccct
     8641 gaggccgcct catcatctta aaacttactg aataaccagc gtattaatga tgttttctgc
     8701 ggtggtctgc gctttttgct gatcgtcagc gggcagcgta atttgcatgg tcagcagttg
     8761 attacccacg ttacccagaa taacggaaga gtacgccgtc tggcctttcg cggagataat
     8821 actgtctaac tgctgcattt tgtgaccttt cagctcaatg gctttattgg ttactacttg
     8881 cagctgcgga tcgcggctac gttgctgatc ttccagacgc ttcgccaaca ccgccagatc
     8941 ttctttcgga tcatcgccca tgatgacgat gactgctttc tgcccggtgg cgtcggacca
     9001 gacatgcatg ttattggcct gcgttcccag cttaccgctc tggtcggtca tatccgctgg
     9061 cagcgagaaa cttaacttgc catcaagcag gttgacggga ttcccggtag cgttactttc
     9121 cgcgaccgaa ccctgcgccg tagcgttagt gtctttatca tcacaggccg caagccccat
     9181 aaccagcagg ccaattccga catatttaac cagattgcgc attgacttct tcctttcgat
     9241 aaacggccat aacggctcat tcatccatct tatcacaact ctgataacga acctttaact
     9301 cgcctgcaaa gcgttgattt cggatttatc tgccagtctt ttcaatagca tattgagtaa
     9361 tacgccatac attggcagga agaaaacgat actgattaac actttgaaac agtaatcgac
     9421 cagcgcgatt tccatccagt gttcagccat aaaggcatcc gggctacgcc agaaggcaat
     9481 gaagaaaaag gccagcgtgt cgctgacgtt accgaacagt gtggacgctg tcggtgccag
     9541 ccaccagcgg cgactctgac gcaggcggtt aaaaacgtgc acgtcgagga tttgccccag
     9601 cgcgtaggcc atgaaactgg cggtggcgat acgggcgaca aacaggttga agtgggcgag
     9661 tgcgccgaat ccctgccatg accccatata aaacagcgat gagatgacgt aggagatcag
     9721 caatgcgggg atcatcaccg caaagatgat acgacgggcc agcggtgcgc caaaaatacg
     9781 cacggtcagg tcggtagcaa gaaaaataaa cggaaagcta aacgcgcccc aggtggtatg
     9841 gaaaccaaaa atggagacgg gaagctggac cagatagtta ctggaggtaa tcaccagaag
     9901 atgaaataac gataaccaga acaacgcctt atagcgttga gtttgcgaga aaacgttcat
     9961 attgtacctt tttgattaac cattggggtg agggaaccca atacgtacga cacgtctgtt
    10021 accttaacat aataacgtgc ttaccctttt ttcgagccgc cgcatgatac tgctttatgt
    10081 tgacaatgca atggttaatt ttcacgcaat cgttaacctg gtttgcttac ggactcacag
    10141 ggcgtaaact agcgccgttt ttttatgtga tgagaagaaa atgaccgatc tcttttccag
    10201 ccctgaccac acactcgacg cacttggcct gcgctgcccg gaaccggtga tgatggtgcg
    10261 caaaaccgtg cgcaatatgc atcctggcga aacgttgctg attatcgccg acgatccggc
    10321 cactacccgc gatattcctg ggttttgtac ctttatggaa cacgaactgg ttgctaaaga
    10381 gacggatgga ctgccttatc gttatttgat tcgcaaaggc ggttgatggg ggctgattgg
    10441 cttcgatgcc gccttttccc ctcaccctaa ccctctcccc agaggggcga ggggaccgat
    10501 cgcgctcaat gttgcgatcg gtttgcctta tctcctgcgc aacaatctta acgcattcgc
    10561 tgtcaccagc accgtcgcac ccgtatctgc cagcaccgcc agccacaggc cggtcatccc
    10621 taacagcgtg gtgacgagga agatcccttt cagccccagc gcaatagtga tgttctggcg
    10681 gatattggcg tgagtggcgc gtgccagttc aatcatttgc accagaccgc gcaggtggtt
    10741 atgggttaat gctgcgtcgg cggtttccag cgccacgtct gtgccactgc ccattgcaat
    10801 cccaatggcg gcagctttca tcgctggcgc gtcgttaata ccatcaccga ccatcgctag
    10861 gggcgcatgt tgattcagct tggtcaccgc tttgacttta tcttccggca ataggcccgc
    10921 tttaaactcc agccccagtt cgccggcaat ggctgccgca gcgcgtggat tgtcgccagt
    10981 gaggatcact cctttaaccc ccagggcttt tagttcactg atggcagttg cggcatcggc
    11041 gcgcagagta tcctgcaatg caatgatacc cagcacttca tcgttacgta ctaccagcac
    11101 tactgtttgc ccggcgcttt ccagttcatt aatcaaacca gcaaatgcat cagcgggatg
    11161 tttccctgca gcgcaaatca atacgcgctc accgttaacc tgcgcttcaa tgccagaccc
    11221 gaccagcgcc cgctgtgatt cggcggtggg aatggcgagt tcagcaacct gtgcttcgcg
    11281 tacgatggct tgcgccagtg gatgcgtcgc gccttgctcg accgccgccg ccagtgtcag
    11341 cagttcagat tcactaatac ccgttgccgg atgaatcgcg gtaacgcgcg gtttaccgac
    11401 ggtcagcgta ccggttttat caaacgccac ctgggtaaca cgacctagtt gttccagcgc
    11461 cgctccgcct ttaattaacg ccccacgacg cgctgctgcc gccagcccgg aggtaatcgc
    11521 cgcgggcgtg gagataacta acgcacacgg gcagccaatc agcagcagcg tcaggccttt
    11581 ataaatccac tcctgccagc tggcggcaaa cagcagcggc ggcaccagcg tcaccagcag
    11641 agcgacggcc ataatcgcgg gcgtatagat acggctgaaa cggtcgataa accgctcaat
    11701 gggtgcgcga cgctcttcgg cttcttcgat cagtttcaga atccggtcaa tggcgttggc
    11761 acccggttct gacagcactt ccagcgttac cagacggtct acgctggtgg ctcctgcagg
    11821 aactttatcg cccgtcgcgc gctccaccgg aatggattct ccggtcaggg cgctttcatc
    11881 aaaactggca aacggtgaga gcagtttacc gtcggcaggc aaacgtccac ctgcggcgac
    11941 ttcaatcaca tcgccagggc gcaggctgtt aatcgccacc tcttcccgct caccgttacg
    12001 caggcgcgtg gcggtttctg gtttcagcgc cattaacgcg ctgacccctt gacgtgcgcg
    12061 gctggcggcc cagccttcca gtcgttcgcc aatcaaaaac agcagcaaca ccatcgcagc
    12121 ttcagccgtt gcgccaataa acagtgcacc aatagcggct acgctcatta acgtttcaat
    12181 ggcgaagtag ctgccggatt tgatcaaccg taatgcctga cgagcaatcg ggtacagccc
    12241 aaccagcgtg gtcgcgataa acgccagttg cccgaacgga tgattgaact gctccagacc
    12301 ccagctgatt gccatcatca cgattagcgt aatcagcgac aaattctctt tcaggcgcga
    12361 tgcttgtggc tcgtcggcgg actgttcatc gcgcagggaa tagcccgctt tttgcaccgc
    12421 agattcaacc tgggcacgga tgtcattgtc ggcatcaacc accagttttt cggtggcgaa
    12481 caacacctgc acctgattca cgcctgcaag ctggcgcacg gcattttcta ccttgcgcgc
    12541 acaggcggcg cagtccatgc cgctgacttt ccagctatag cgggtgccgg agacgttttc
    12601 agagagcgtt ggcgagctgg aacatgcgcc gtcgcagcaa cagtcgttgg cgttctgtac
    12661 cgtggttagc ggtttgaacg cggcaaattg aggggctttc ttgccgtgat tgtcaggagt
    12721 cgacatggca tcctccggtt aagttttttc tcattaaccg aaggatacac tctggagtcg
    12781 actccagagt caagttttat cagagataca gcgagcggac gatgaggaag tgaccggcaa
    12841 agtagcaggc cgcagcaatc gcgttatccg cacggaagcg tcggcgatag tgactaccca
    12901 gccagacaaa gttactgata aacagcaacg aagcgccgac aaacgcagag agcgccggag
    12961 cggtcggacg gaagaaccac agttcacctg ccagccacac catcaccagc gtcatgccga
    13021 taaacgtgca gataggccaa cgatactctt ccagacgcgt ccagataatc gccagtaaca
    13081 gtgcgcccag aaccagcagc accagtggca gaggccagaa gaaagagagc gtcatctgac
    13141 tggcgaaata gatggtgtac agcaggtgcg agaggaaaaa cgcgccgatg gcgtacatca
    13201 gacgttgacg tggcaacagg gttagcgcat cgcccagcag tgaggcgcac agccccgcca
    13261 gcaccagata gctaatggcg tcgaacatcg gcgcttgcca ggccagtaac agcaggagaa
    13321 gaagggttaa cggtttaaac acccagcgtt gccaggttgg cccacgatac gatgcatcca
    13381 cagatagcca tgcggaaaga cagacagcga taaacgacca aagcatctta gttccttgaa
    13441 ttcgttattt tttcgtaagc ggaatgccta cggtcttgct tccagtttag tggcgagggt
    13501 ggacggatga caacaccata actggcaggg tatgcttatt tccgcatttt ccgatgaggg
    13561 ataaagatga gcaaaccacc tcttttcttt attgttatca ttggcttaat catcgtcgcc
    13621 gcatcgtttc gttttatgca acagcgacgg gaaaaagctg ataatgatat ggctccgctc
    13681 cagcaaaagc tggtggtgag caacaagcgg gaaaaaccga ttaacgatcg ccgttcgcgc
    13741 cagcaggaag tgactccggc aggcaccagt atgcgctatg aggcaagctt caaaccgcaa
    13801 agcggaggaa tggagcagac gtttcgcctc gacgcccagc agtaccacgc cctgacagtg
    13861 ggcgataaag gtacgctgag ctataaagga acgcgctttg tcagctttgt aggcgaacaa
    13921 taaggttatt ttttaacttt aaatttcttc tgccagacca gcagttcaaa cacgccgaaa
    13981 aggaaaatcc gcaccttttc ggcggtggtc atctgcgggc catctttcgg taaagtggat
    14041 ttcaatagcg ccagttgcat accatgcatc agcacggtaa aaatcagcgc gacgttaacg
    14101 aaaatattca gcggacgtgg gaagggatgc accaggttga ggattaaaaa tccccaaacg
    14161 cagagcatta acaaacgacc aatattaatc agcatcactt tctccttgtg cttcgcgttg
    14221 atacagccga taagccacct gacccgccac tttttcccga tgtaatgacc agtttgccgg
    14281 aacggtgggc agaccgtttt cgacttcgct ttcgacataa atcagggctt cgtcagccag
    14341 ccagccgtta tcttccagta aatttatcgt ctcttctaac aagccacggc ggaacggtgg
    14401 atcgacaaac acgatattat gcggtgtgcc tttttgcgcc aggaatgaca ttgcgttgct
    14461 gttcaccacg cgtgcattgc ctgcttttag tgtcgccaga ttcttaatta actgctgaga
    14521 aaccgcgcga tccatctcaa tcaacgtggc ccccgcagca tagcgcgaca acgcttccag
    14581 ccccagcgcg ccgctcccgg cgaagcaatc cagacattgg gcgtcaacaa tgaccggagc
    14641 cagccagtta aacaacgttt cgcgtacgcg gtcggtggtg gggcgcagac ctgggctatc
    14701 aggaaccggg agtttacggc ctcgccactg cccgccaata atgcggattt ggccgctgcc
    14761 ggaatgattc ggttttttca tgataaattg ctcaatccgc cagataacac atacttgcag
    14821 gcggtgatgt gaattaagtt aagtgataga ctatttcatc atttttttag ctgctatgta
    14881 catagcgtta acgctgtgcc atgaagcaac agcgaggagt gtagtcgcaa atggcgaaag
    14941 aaaaaaaacg tggctttttt tcctggctgg gctttggtca aaaagagcag accccggaaa
    15001 aagagacaga agttcagaat gaacaaccgg ttgtagaaga aatcgttcag gcgcaagagc
    15061 ctgtgaaggc ttctgaacaa gccatcgaag agcagccgca ggcgcatact gaagccgagg
    15121 cggaaacttt tgctgccgac gttgtggaag tcactgaaca ggttgctgaa agtgaaaaag
    15181 cgcagcctga agcggaagtc gttgcacagc cggaatcggt cgtagaagaa acgccggagc
    15241 cagtggctat cgagcgtgaa gaactgccgt tgccggaaga cgtcaacgcc gaagaggttt
    15301 cgccagaaga gtggcaggct gaagcggaaa ccgtagcgat tgtcgaagcg gcagaagaag
    15361 cggctaaaga agaaatcacc gacgaagagc tggaagcaca ggcgctggct gccgaagcgg
    15421 cagaagaggc ggtgatggta gttcctccgg cagaagaaga gcagccggtt gaagaaattg
    15481 cccaagagca agaaaaaccg accaaagaag gcttcttcgc gcgcctgaaa cgcagcctgt
    15541 taaaaaccaa agaaaatctc ggttccggat ttatcagcct gttccgcggt aaaaaaatcg
    15601 acgatgatct gtttgaggag ctagaagagc agctgttgat cgccgatgtg ggcgtggaaa
    15661 ccacacgtaa aataatcacc aatctgacgg aaggcgcatc ccgcaagcag cttcgtgatg
    15721 ccgaggcgct ctatggcctg ctgaaagaag agatgggcga gattctggcg aaagtcgatg
    15781 agccgctgaa tgttgaaggt aaaacgccgt tcgtgatcct gatggtgggc gtcaacggtg
    15841 tgggtaaaac cacgacgatt ggtaagctgg cgcgtcagtt tgagcagcag ggtaaatcgg
    15901 tgatgctggc ggcgggcgat actttccgtg cagctgcggt tgaacagctt caggtctggg
    15961 gtcagcgcaa caatattccg gtgattgccc agcataccgg tgcggattcc gcctctgtta
    16021 tcttcgacgc cattcaggca gctaaagcgc gtaatatcga cgtcctgatt gccgataccg
    16081 ccggacgtct gcagaacaaa tcgcatctga tggaagagtt gaagaaaatc gtccgcgtga
    16141 tgaagaaact cgacgttgaa gcgccgcatg aagttatgct gactattgat gccagcaccg
    16201 ggcagaacgc ggtaagccag gccaaactgt tccacgaagc tgttggctta accggcatca
    16261 cgctaacgaa actggacggc acggcgaaag gcggggtaat tttctcggtg gctgaccagt
    16321 ttggtatccc tatccgctac attggtgtcg gcgaacgtat tgaggatttg cgtccgttta
    16381 aggcggacga ctttatagag gcactttttg cccgagagga ttaacaatga ttcgctttga
    16441 acatgtcagc aaggcttatc tcggtgggag acaggcgctg cagggcgtta cgttccatat
    16501 gcagccgggt gagatggcgt ttctgaccgg tcattccggc gcagggaaaa gtaccctcct
    16561 gaagctgatc tgtgggattg agcggcccag cgccgggaaa atctggttta gcggccatga
    16621 catcacgcgt ctgaaaaacc gtgaagttcc gtttctgcgc cgccagattg gcatgatttt
    16681 ccaggatcac catctactga tggaccgtac tgtctacgat aacgtggcga tcccgctgat
    16741 tatcgctggt gccagcggtg acgatattcg tcgccgggtg tcggcggcac tggataaagt
    16801 cgggctactg gacaaagcga agaacttccc tattcagctt tccggcggtg aacaacagcg
    16861 tgttggcatt gcccgcgcgg tggtgaataa gcccgcggta ctgctggcgg acgaaccgac
    16921 cggtaacctg gacgacgcgt tgtcggaagg gattctacgt ctgtttgaag agtttaaccg
    16981 cgttggggta accgtattga tggcaacgca cgacatcaac ctgatttcac ggcgttccta
    17041 tcgcatgctc accctgagcg atggtcactt gcatggaggc gtgggccatg aataagcgcg
    17101 atgcaatcaa tcatattcgg cagtttggtg ggcgtcttga tcgcttccgt aaatcggtcg
    17161 gcggctcagg cgacggcggt cgtaacgcac cgaaacgcgc gaaatcctcg ccaaaaccgg
    17221 taaatcgcaa aaccaacgtt ttcaacgaac aggtgcgcta tgccttccac ggcgcattgc
    17281 aggatctgaa aagcaaaccg ttcgccacgt ttttaacggt gatggttatc gccatctccc
    17341 tgacgctgcc cagcgtctgt tatatggtgt acaaaaacgt taaccaggcg gcgacgcagt
    17401 attatccgtc accgcaaatc actgtttatc tgcaaaaaac gctggacgat gacgccgctg
    17461 cgggcgtggt ggcacagttg caggccgagc aaggcgtgga gaaagtgaat tatctttctc
    17521 gtgaagacgc actgggcgag ttccgtaact ggtctggttt tggtggtgcg ctggatatgc
    17581 tggaagaaaa cccacttccg gcagtagcgg tggtgatccc gaaactcgat ttccagggta
    17641 cggagtctct gaatacgctg cgtgatcgta tcacgcagat taacggcatt gacgaagtgc
    17701 ggatggatga cagctggttt gcccgtctgg cggcgttgac cgggctggtc gggcgcgttt
    17761 cggcgatgat cggcgtgttg atggtggcgg cagtgttcct cgtcatcggt aacagtgtgc
    17821 gcctgagtat ctttgctcgc cgtgactcca ttaacgtgca gaaactgatt ggtgcgacgg
    17881 atggtttcat cctgcgcccg ttcctgtacg gtggcgcact gctgggattt tctggcgcat
    17941 tgttgtcatt aattttgtca gaaattctgg tgctgcgatt gtcatcggcg gttgcggaag
    18001 tggcacaggt tttcggaacg aagtttgata tcaatggttt atctttcgat gaatgcctgc
    18061 tgttgctgct ggtatgctcg atgattggct gggtggcagc gtggcttgcc acggtacaac
    18121 atttacgcca ctttacgcct gaataataaa agcgtgttat actctttccc tgcaatgggt
    18181 tacgtagcag ggaaagagac cccgttgtct cttcccggta tttcatctct atgtcacatt
    18241 ttgtgcgtaa tttattcaca agcttgcatt gaacttgtgg ataaaatcac ggtctgataa
    18301 aacagtgaat gataacctcg ttgctcttaa gctctggcac agttgttgct accactgaag
    18361 cgccagaaga tatcgattga gaggatttga atgactgaca aaatgcaaag tttagcttta
    18421 gccccagttg gcaacctgga ttcctacatc cgggcagcta acgcgtggcc gatgttgtcg
    18481 gctgacgagg agcgggcgct ggctgaaaag ctgcattacc atggcgatct ggaagcagct
    18541 aaaacgctga tcctgtctca cctgcggttt gttgttcata ttgctcgtaa ttatgcgggc
    18601 tatggcctgc cacaggcgga tttgattcag gaaggtaaca tcggcctgat gaaagcagtg
    18661 cgccgtttta acccggaagt gggtgtgcgc ctggtctcct tcgccgtcca ctggatcaaa
    18721 gcagagatcc acgaatacgt tctgcgtaac tggcgtatcg tcaaagttgc gaccaccaaa
    18781 gcgcagcgca aactgttctt caacctgcgt aaaaccaagc agcgtctggg ctggtttaac
    18841 caggatgaag tcgaaatggt ggcccgtgaa ctgggcgtaa ccagcaaaga cgtacgtgag
    18901 atggaatcgc gtatggcggc acaggacatg acctttgacc tgtcttccga cgacgattcc
    18961 gacagccagc cgatggcacc ggtgctctat ctgcaggata aatcatctaa ctttgccgac
    19021 ggcattgaag atgataactg ggaagagcag gcggcaaacc gtctgaccga cgcgatgcaa
    19081 ggtctggacg agcgtagcca ggacatcatc cgcgcgcgct ggctggacga agacaacaag
    19141 tccacgttgc aggaactggc tgaccgttac ggcgtttccg ctgagcgtgt gcgccagctg
    19201 gaaaagaacg cgatgaaaaa attgcgtgct gccattgaag cgtaatttcc gctattaagc
    19261 agagaaccct ggatgagagt ccggggtttt tgttttttgg gcctctgtaa taatcaattt
    19321 cccctccggc aaaacgccaa tccccacgca gattgttaat aaactgtcaa aatagctatt
    19381 ccaatatcat aaaaattggg tatgttttag cagagtatgc tgctaaagca cgggtagtca
    19441 tgcataaaac gaaataaagt gctgaacaac aacatcacaa cacacgtaat aaccagaaga
    19501 atggggattc tcaggatgaa cataaagggt aaagcgttac tggcaggatg tatcgcgctg
    19561 gcattcagca atatggctct ggcagaagat attaaagtcg cggtcgtggg cgcaatgtcc
    19621 ggtccggttg cgcagtacgg tgaccaggag tttaccggcg cagagcaggc ggttgcggat
    19681 atcaacgcta aaggcggcat taaaggcaac aaactgcaaa tcgtaaaata tgacgatgcc
    19741 tgtgacccga aacaggcggt tgcagtggcg aacaaagtcg ttaacgacgg cattaaatac
    19801 gtgattggtc acctctgttc ttcatcaacg cagcctgcgt ctgatatcta cgaagacgaa
    19861 ggcattttaa tgatcacccc agcggcaacc gcgccggagc tgaccgcccg tggctatcag
    19921 ctgatcctgc gcaccaccgg cctggactcc gaccaggggc cgacggcggc gaaatatatt
    19981 cttgagaaag tgaaaccgca gcgtattgct atcgttcatg acaaacagca atacggcgaa
    20041 ggtctggcgc gagcggtgca ggacgccctg aagaaaggca atgctaacgt ggtgttcttt
    20101 gatggtatca ccgccgggga aaaagatttc tcaacgctgg tggcgcgtct gaaaaaagag
    20161 aatatcgact tcgtttacta cggcggttat cacccggaaa tggggcaaat cctgcgtcag
    20221 gcacgcgcgg cagggctgaa aactcagttt atggggccgg aaggtgtggc taacgtttcg
    20281 ctgtctaaca ttgcgggcga atcagcggaa gggctgctgg tgaccaagcc gaagaactac
    20341 gatcaggttc cggcgaacaa acccattgtt gacgccatca aagcgaaaaa acaggaccca
    20401 agcggcgcat tcgtttggac cacctacgcc gcgctgcaat ctttgcaggc gggcctgaat
    20461 cagtctgacg atccggctga aatcgccaaa tacctgaaag cgaactcggt tgataccgtg
    20521 atgggaccgc tgacctggga tgagaaaggc gatctgaaag gctttgagtt cggcgtattt
    20581 gactggcacg ccaacggcac ggcgaccgat gcgaagtaat tgttaatcgg caacttcggg
    20641 ttgccgccaa attgctatta tcgagtacgt tgcttcatgc cggatgcggc gtaaacgcct
    20701 tatccggcct acaagatcca aagaaatcag taaattgcaa cacacattgt aggcctgata
    20761 agcgtagcgc atcaggcaat ttctcgttgg tcatcacttt tgaaatcaac ttgacgatta
    20821 acgcttctcc cagccgccct gttgcgccgt aaatcccagt gcctgcataa acgccgtcat
    20881 cacaccgcga tcttccacgc ctgcatccgc catccaccag catgaaacgc caggattgtt
    20941 acgcaaaacc tcttccagca gatattgccc cacaccgcga cgtcgggtga cttcccgcac
    21001 acgcagggaa tccagtgctc cctcggtgcc gcttaaggtt acccgtacgg cagcgagcag
    21061 gcgctcgtta aaacgcgcgg cgtagatacg gtggttatcg tcaacctgta aagaggaagg
    21121 ggaatactcc ggccagatct tttgcaggtc aatccggtcc tggtcgctaa agttttctaa
    21181 tcgaatgatg gtcagcttca tgggtaaccc gtgtaaatca caaaagtgga accagtgtag
    21241 cgaaataatt taatcggagg ctttctcttt tttatttctt ttggcaggtg attaattttt
    21301 taacagcaat aattacaaag ttaaaacatt agagaatgaa aaatacccag cataatcccc
    21361 tgaatggtag tgaattattc cgccctttgt gccgttattt tatgctgaca aaggcacttt
    21421 tttctgttta tctatcaata aattcagaat attatctgtt cttaatcgac tgaaaaatag
    21481 ggattttaat cactattatc acaaaatact gcgctaaacc cttaatcaga caggcaaaca
    21541 cagtgcagta taaaaaaaga acagtctgat ttgttaacac ataaaaacaa agcaacacaa
    21601 catcacgaat ggggattttt gactatgaaa cggaatgcga aaactatcat cgcagggatg
    21661 attgcactgg caatttcaca caccgctatg gctgacgata ttaaagtcgc cgttgtcggc
    21721 gcgatgtccg gcccgattgc ccagtggggc gatatggaat ttaacggcgc gcgtcaggcg
    21781 attaaagaca ttaatgccaa agggggaatt aagggcgaca agctggttgg cgtggaatat
    21841 gacgacgcct gcgacccgaa acaagccgtt gcggtcgcca acaaaatcgt taatgacggc
    21901 attaaatacg ttattggtca tctgtgttct tcttctaccc aacctgcatc agatatctac
    21961 gaagacgaag gtattctgat gatctcgccg ggagcgacca acccggagct gacccaacgc
    22021 ggttatcaac acattatgcg tactgccggg ctggactctt cccaggggcc aacggcggca
    22081 aaatacattc ttgagacggt gaagccccag cgcatcgcca tcattcacga caaacaacag
    22141 tatggcgaag ggctggcgcg ttcggtgcag gacgggctga aagcggctaa cgccaacgtc
    22201 gtcttcttcg acggtattac cgccggggag aaagatttct ccgcgctgat cgcccgcctg
    22261 aaaaaagaaa acatcgactt cgtttactac ggcggttact acccggaaat ggggcagatg
    22321 ctgcgccagg cccgttccgt tggcctgaaa actcagttta tggggccgga aggtgtgggt
    22381 aacgcatcat tgtcgaatat tgccggtgat gctgccgaag gcatgttggt cactatgcca
    22441 aaacgctatg accaggatcc ggcaaaccag ggcatcgttg atgcgctgaa agcagacaag
    22501 aaagatccgt ccgggcctta tgtctggatc acctacgcgg cggtgcaatc tctggcgact
    22561 gcccttgagc gtactggcag cgatgagccg ctggcgctgg tgaaagattt aaaagctaac
    22621 ggtgcaaaca ccgtgattgg gccgctgaac tgggatgaaa aaggcgatct taagggattt
    22681 gattttggtg tcttccagtg gcacgccgac ggttcatcca cggcagccaa gtgatcatcc
    22741 caccgcccgt aaaatgcggg cgggtttaga aaggttacct tatgtctgag cagtttttgt
    22801 atttcttgca gcagatgttt aacggcgtca cgctgggcag tacctacgcg ctgatagcca
    22861 tcggctacac catggtttac ggcattatcg gcatgatcaa cttcgcccac ggtgaggttt
    22921 atatgattgg cagctacgtc tcatttatga tcatcgccgc gctgatgatg atgggcattg
    22981 ataccggctg gctgctggtg gcggcgggat tcgtcggcgc aatcgtcatc gccagcgcct
    23041 acggctggag tatcgaacgg gtagcttacc gcccggtgcg taactctaag cgcctgattg
    23101 cgcttatttc cgcaatcggt atgtccatct tcctgcaaaa ctacgtcagc ctgaccgaag
    23161 gttcgcgcga cgtggcgctg ccgagcctgt ttaacggtca gtgggtggtg ggccatagcg
    23221 aaaacttctc tgcctcaatt actaccatgc aggcggtgat ctggattgtc accttcctcg
    23281 ccatgctggc gctgacgatt ttcattcgtt attcccgtat ggggcgcgcc tgccgtgcct
    23341 gcgccgaaga tctgaaaatg gcgagcctgc ttggcatcaa caccgaccgg gtgattgctt
    23401 tgacctttgt gattggcgcg gcgatggcgg cagtggctgg cgtactgctc ggtcagttct
    23461 acggcgtaat taacccctac atcggcttta tggccgggat gaaagccttt accgctgcgg
    23521 tgctcggtgg gattggcagc attccgggag cgatgattgg cggcctgatt ctggggattg
    23581 cggaggcgct ctcttctgcc tatctgagta cggaatataa agatgtggtc tcattcgccc
    23641 tgctgattct ggtgctgctg gtgatgccga ccggtattct gggtcgcccg gaggtagaga
    23701 aagtatgaaa ccgatgcata ttgcaatggc gctgctctct gccgcgatgt tctttgtcct
    23761 cgctggcgtc tttatgggcg tgcaactgga gctggatggc accaaactgg tggtcgacag
    23821 cgcttcggat gtccgttggc agtgggtgtt tatcggcacg gcggtggtct ttttctttca
    23881 gcttttgcga cctgctttcc agaaagggtt gaaaagcgtt tccggaccga agtttattct
    23941 gcccgcgatt gatgggtcca cggtgaagca gaaactgttc ctcgtggcgc tgctggtgct
    24001 tgcggtggcg tggccgttta tggtgtcacg tgggacggtg gatatcgcca ctctgaccat
    24061 gatctacatt atcctcggtc tcgggctgaa tgtggttgtt ggtctttctg gtctgctggt
    24121 gctggggtac ggcggttttt acgccatcgg cgcttacacc tttgcgctgc tcaatcacta
    24181 ttacggcttg ggcttctgga cttgtctgcc gattgccggg ttaatggcag cggcggcggg
    24241 cttcctgctc ggctttccgg tgctgcgtct gcgtggtgat tatctggcga tcgttaccct
    24301 tggcttcggc gaaattgtgc gcatattgct gctcaataac accgaaatta ccggcggccc
    24361 gaacggaatc agtcagatcc cgaaaccgac tttcttcggc cttgagttca gccgtaccgc
    24421 ccgtgaaggc ggttgggaca cgttcagtaa tttctttggc ctgaaatacg atccctccga
    24481 tcgcgtcatc ttcctgtatc tggtggcgtt gctgctggtg gtgctaagcc tgtttgtcat
    24541 taaccgcctg ctgcggatgc cgctggggcg tgcgtgggaa gcgttgcgtg aagatgagat
    24601 cgcctgccgt tcgctgggct taagcccgcg tcgtatcaag ctgactgcct ttaccataag
    24661 tgccgcgttt gccggttttg ccggaacgct gtttgcggcg cgtcagggct ttgtcagccc
    24721 ggaatccttc acctttgccg aaccggcgtt tgtgctggcg atagtggtgc tcggcggtat
    24781 gggctcgcaa tttgcggtga ttctggcggc aattttgctg gtggtgtcgc gtgagttgat
    24841 gcgtgatttc aacgaataca gcatgttaat gctcggtggt ttgatggtgc tgatgatgat
    24901 ctggcgtccg cagggcttgc tgcccatgac gcgcccgcaa ctgaagctga aaaacggcgc
    24961 agcgaaagga gagcaggcat gagtcagcca ttattatctg ttaacggtct gatgatgcgc
    25021 ttcggcggcc tgctggcggt gaacaacgtc aatcttgaac tgtacccgca ggagatcgtc
    25081 tcgttaatcg gccctaacgg tgccggaaaa accacggttt ttaactgtct gaccggattc
    25141 tacaaaccca ccggcggcac cattttactg cgcgatcagc acctggaagg tttaccgggg
    25201 cagcaaatcg cccgcatggg cgcggtgcgc accttccagc atgtgcgtct gttccgtgaa
    25261 atgacggtaa ttgaaaacct gctggtggcg cagcatcagc aactgaaaac cgggctgttc
    25321 tcaggcctgt tgaaaacgcc ttccttccgt cgcgcccaga gcgaagcgct cgaccgcgcc
    25381 gccacctggc ttgagcgcat tggtttgctg gaacacgcca accgtcaggc gagtaacctg
    25441 gcctatggtg accaacgccg tctggagatt gcccgctgca tggtgacgca gccggagatt
    25501 ttaatgctcg acgaaccggc ggcaggtctt aacccgaaag agacgaaaga gctggatgag
    25561 ctgattgccg aactgcgcaa tcatcacaac accactatct tgttgattga acacgatatg
    25621 aagctggtga tgggaatttc ggaccgaatt tacgtggtca atcaggggac gccgctggca
    25681 aacggtacgc cggagcagat ccgtaataac ccggacgtga tccgtgccta tttaggtgag
    25741 gcataagatg gaaaaagtca tgttgtcctt tgacaaagtc agcgcccact acggcaaaat
    25801 ccaggcgctg catgaggtga gcctgcatat caatcagggc gagattgtca ccctcattgg
    25861 cgcgaacggg gcggggaaaa ccaccttgct cggcacatta tgcggcgatc cgcgcgccac
    25921 tagcgggcga attgtgtttg atgataaaga cattaccgac tggcagacgg cgaaaatcat
    25981 gcgcgaagcg gtagcgattg tcccggaagg gcgtcgcgtc ttctcgcgga tgacggtgga
    26041 agagaacctg gcgatgggcg gcttttttgc cgaacgcgac cagttccagg agcgcataaa
    26101 gtgggtgtat gaactgttcc cgcgtctcca tgagcgccgt gttcagcggg cgggcaccat
    26161 gtcaggcggt gaacagcaga tgctggcgat tggtcgcgca ctgatgagca atccgcgttt
    26221 gttgttactt gatgagccat cgctcggtct tgcgccgatt atcatccagc aaattttcga
    26281 caccatcgag cagctgcgcg agcaggggat gactatcttc ctcgtcgagc agaacgccaa
    26341 ccaggcgcta aagctggcgg atcgcggcta cgtgctggaa aacggccatg tggtgctctc
    26401 cgatactggt gatgcactac tggcgaacga agcggtgaga agtgcgtatt taggcgggta
    26461 aattatcaat aacccggcag gcacgttctg ccgggttatt gtccgaatac agacttgttt
    26521 caactgaccg ggaagattaa aaccagacca cttatttacc acggaaaggt tccctcccat
    26581 gcattatgcc gttgtcgtca tgcttgatct gctttgctgt atccacgctt atcgctccgg
    26641 acaagagcgg tattggattt ttatcatctt ctgctttccg gtgattggct gcgtggcgta
    26701 tttcgtcatg gtgatgctgc ctgaaacggg cgctgaccgt cacgggcgta ctttgctgat
    26761 gcgcctgcag gataaaatca gcccggaacg ccacctgcac aaattaggtg aagagctggc
    26821 gattgccgag acgaatcaaa accattatgc gctagctaat gaactggcgc gtctggggcg
    26881 ttattacgac gccgttctcc attatcagca ggcgttacgc ggggtatccg tccatgaagc
    26941 ggcaatgatg ttaagtctgg cgcaggcgca gtttgccatc caggagttcg ccgcctgtca
    27001 gcagacgctg gaagatgtga tgtgttataa ccccgatttt cagtcggcag acgggcactt
    27061 gttattcgcc agaaccttag ccgctcagga aaaatacgct gatgcggaaa gcgagtttga
    27121 agtgttggtt tcttattacc ccggcccgca ggtgcgtatt tactatgcgg aaatgctggc
    27181 gaaactgagt cggttacgtg aagccaacga gcagtatgct gctgtggttg atacggcgaa
    27241 acgctcaaga gcgcattata gaaaacacca ccgggaatgg attaagaccg ccaatgatcg
    27301 gctgaagcag agcattgttc gataaaggta accaggaatg aggttatgta tacacagcaa
    27361 gttgagcaaa gttttaaatt attgcgcgag aatggcatat ttattacccg ggggttaaca
    27421 gcggcagaaa tagacgccgc agaaaagcgc tacaatttta aattcccgaa cgattacaaa
    27481 gcattgctta tacagggaat gcctttgtat gactatgatt ttactgactg gcgcaacctc
    27541 tctgatgagt atgtggaata cattcaatat aaaatgttcg atgaaactat ttcgggcatt
    27601 ttatattgca tcgataagtt cgacgcgtgg ccacaagcct ggggaaaccg tccagataat
    27661 ctggaggagc gactcaattt ttcgcgtgag aaaatcaaga aaaatccctt atttattcca
    27721 ataaaatcaa atcgctatct tgcactttct ccggctgata gtggaaatcc tgtctattca
    27781 attcacgagg gagatgatgt gatttgttat ggtgagaatt tatgggatta ctttactaag
    27841 atgtatgtca gcgaagatga atgtgacatt cacattaatc taaaaactat gccagaaccg
    27901 ttccctgcat ataacacctt tgtttat
//
LOCUS       DAJVTL010000052        27887 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.052, whole genome shotgun sequence.
ACCESSION   DAJVTL010000052 DAJVTL010000000
VERSION     DAJVTL010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27887
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.052"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..627
                     /gene="aqpZ"
                     /locus_tag="OQQ26_002078"
     CDS             <1..627
                     /gene="aqpZ"
                     /locus_tag="OQQ26_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HCS1857534.1"
                     /translation="VLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVT
                     IGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHS
                     PGGYSMLSALVVELVLSAGFLLVIHGATDKYAPAGFAPIAIGLALTLIHLISIPVTNT
                     SVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD"
     gene            1084..1983
                     /gene="lysO"
                     /locus_tag="OQQ26_002079"
     CDS             1084..1983
                     /gene="lysO"
                     /locus_tag="OQQ26_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415395.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lysine exporter LysO"
                     /protein_id="HCS1857535.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFM
                     GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI
                     AMALESLKLCGVVVIGFAIGLSGLGFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ
                     IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTKSFG
                     PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV
                     PAAIVHGFILSLLVPILIAFFSA"
     gene            2127..3779
                     /gene="hcp"
                     /locus_tag="OQQ26_002080"
                     /gene_synonym="priS"
     CDS             2127..3779
                     /gene="hcp"
                     /locus_tag="OQQ26_002080"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HCS1857536.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC
                     LAVDANARVDNPMADLQLVSDALGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL
                     DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRS
                     IVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA"
     gene            3791..4759
                     /gene="hcr"
                     /locus_tag="OQQ26_002081"
     CDS             3791..4759
                     /gene="hcr"
                     /locus_tag="OQQ26_002081"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HCS1857537.1"
                     /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL
                     VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
                     EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVQVIYNVRTPQDVIFADEW
                     RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG
                     VTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
                     VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
     gene            4892..6610
                     /gene="poxB"
                     /locus_tag="OQQ26_002082"
     CDS             4892..6610
                     /gene="poxB"
                     /locus_tag="OQQ26_002082"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HCS1857538.1"
                     /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
                     MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
                     PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
                     GDVALKPAPEGATTHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
                     LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF
                     PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKTDRKFLDK
                     ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
                     MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
                     LPVKIIVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEID
                     EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
                     KTNWLR"
     gene            6647..7648
                     /gene="ltaE"
                     /locus_tag="OQQ26_002083"
     CDS             6647..7648
                     /gene="ltaE"
                     /locus_tag="OQQ26_002083"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000566380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HCS1857539.1"
                     /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
                     ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP
                     IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
                     RWRKMTGGGMRQSGILAAAGMYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
                     MLFVRVGEENAAALGEYMKARNVLINASPIVRLVTHLDVSREQLADVAAHWRAFLAS"
     gene            7659..9089
                     /locus_tag="OQQ26_002084"
     CDS             7659..9089
                     /locus_tag="OQQ26_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2867 domain-containing protein"
                     /protein_id="HCS1857540.1"
                     /translation="MPQRILVLGASGYIGQHLVHTLSQQGHQILAAARHVDRLAKLQL
                     ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP
                     VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
                     DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPANEHRIFEAAGPEVLSYQQQ
                     FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDSAL
                     RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
                     SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD
                     SWKVIVVEPEKQLTLLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLFYWL
                     LMIPAHLFIFRGMAKQIARLAEQSTD"
     gene            9188..9811
                     /locus_tag="OQQ26_002085"
     CDS             9188..9811
                     /locus_tag="OQQ26_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415389.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HCS1857541.1"
                     /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG
                     AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSMERLGRKSAKEPPLTHY
                     GVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKLPR"
     gene            complement(9808..10638)
                     /gene="amiD"
                     /locus_tag="OQQ26_002086"
     CDS             complement(9808..10638)
                     /gene="amiD"
                     /locus_tag="OQQ26_002086"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiD"
                     /protein_id="HCS1857542.1"
                     /translation="MRRVFWLVAAALLLAGCAGEKGIVEKEGYQLDTRHQAQAAYPRI
                     KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI
                     SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP
                     ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
                     LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD
                     "
     gene            complement(10635..10958)
                     /locus_tag="OQQ26_002087"
     CDS             complement(10635..10958)
                     /locus_tag="OQQ26_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HCS1857543.1"
                     /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSDAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
                     VKTRR"
     gene            complement(11169..12938)
                     /locus_tag="OQQ26_002088"
                     /pseudo
     CDS             complement(11169..12938)
                     /locus_tag="OQQ26_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706746.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
     gene            13585..14100
                     /locus_tag="OQQ26_002089"
     CDS             13585..14100
                     /locus_tag="OQQ26_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706745.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1857544.1"
                     /translation="MRYRSLSLLIPCALLLSACTTVTPAYKDNGPRTGSCVQGGPDSV
                     AQQFYDYRIQHRSNDITALRPYLSDKLATQLSDASRDNSHRELLSSDPFSSRTTLPDS
                     AHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
                     AGTLRQSIENR"
     gene            14318..15046
                     /gene="artP"
                     /locus_tag="OQQ26_002090"
     CDS             14318..15046
                     /gene="artP"
                     /locus_tag="OQQ26_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HCS1857545.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
                     LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
                     IVEQGDASCFTEPQTEAFKNYLSH"
     gene            15064..15795
                     /gene="artJ"
                     /locus_tag="OQQ26_002091"
     CDS             15064..15795
                     /gene="artJ"
                     /locus_tag="OQQ26_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1857546.1"
                     /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV
                     GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK
                     LDLQNGRIDSVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KLNTALEKVKKDGTYETIYNKWFQK"
     gene            15802..16518
                     /gene="artQ"
                     /locus_tag="OQQ26_002092"
     CDS             15802..16518
                     /gene="artQ"
                     /locus_tag="OQQ26_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HCS1857547.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVA
                     WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
                     SQYILKRIDLRATRFERRPS"
     gene            16518..17186
                     /gene="artM"
                     /locus_tag="OQQ26_002093"
     CDS             16518..17186
                     /gene="artM"
                     /locus_tag="OQQ26_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HCS1857548.1"
                     /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
                     VWLVRGYITLFTGTPLLVQIFLIYYGPSQFPTLQEYPALWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            17412..18143
                     /gene="artJ"
                     /locus_tag="OQQ26_002094"
     CDS             17412..18143
                     /gene="artJ"
                     /locus_tag="OQQ26_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein ArtJ"
                     /protein_id="HCS1857549.1"
                     /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
                     GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
                     PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKINDQWFPQ"
     gene            complement(18172..19299)
                     /gene="rlmC"
                     /locus_tag="OQQ26_002095"
     CDS             complement(18172..19299)
                     /gene="rlmC"
                     /locus_tag="OQQ26_002095"
                     /EC_number="2.1.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HCS1857550.1"
                     /translation="MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEW
                     CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
                     PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQE
                     QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALVERFNDVPLWIRPQSFFQTNPAVA
                     SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAA
                     ELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
                     NAQTMAKDIRELPGYRIERVQLFDMFPHTAHYEVMTLLVKQ"
     gene            complement(19340..19828)
                     /locus_tag="OQQ26_002096"
     CDS             complement(19340..19828)
                     /locus_tag="OQQ26_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HCS1857551.1"
                     /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
                     NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
                     TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
                     LQ"
     gene            complement(19888..20733)
                     /gene="potI"
                     /locus_tag="OQQ26_002097"
     CDS             complement(19888..20733)
                     /gene="potI"
                     /locus_tag="OQQ26_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HCS1857552.1"
                     /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSMRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
                     AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
                     SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
                     RARRG"
     gene            complement(20730..21677)
                     /gene="potH"
                     /locus_tag="OQQ26_002098"
     CDS             complement(20730..21677)
                     /gene="potH"
                     /locus_tag="OQQ26_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HCS1857553.1"
                     /translation="MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
                     LQVAAISTFCCLLIGYPLAWAHSKPSTRNILLLLVILPSWTSFLIRVYAWMRILKNNG
                     VLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALD
                     LGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEF
                     FNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            complement(21687..22853)
                     /gene="potG"
                     /locus_tag="OQQ26_002099"
                     /pseudo
     CDS             complement(21687..22853)
                     /gene="potG"
                     /locus_tag="OQQ26_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
     gene            complement(22947..24059)
                     /gene="potF"
                     /locus_tag="OQQ26_002100"
     CDS             complement(22947..24059)
                     /gene="potF"
                     /locus_tag="OQQ26_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HCS1857554.1"
                     /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPEWKNLAPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
                     DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRDNPG
                     IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
     gene            complement(24411..24887)
                     /locus_tag="OQQ26_002101"
     CDS             complement(24411..24887)
                     /locus_tag="OQQ26_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HCS1857555.1"
                     /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
                     DAKIDLIDHTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
     gene            complement(24975..25877)
                     /gene="rimK"
                     /locus_tag="OQQ26_002102"
     CDS             complement(24975..25877)
                     /gene="rimK"
                     /locus_tag="OQQ26_002102"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HCS1857556.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
                     SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG
                     AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
                     DIAGKMIRWIERHATTEYCLKTGG"
     gene            complement(25938..26660)
                     /gene="nfsA"
                     /locus_tag="OQQ26_002103"
     CDS             complement(25938..26660)
                     /gene="nfsA"
                     /locus_tag="OQQ26_002103"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HCS1857557.1"
                     /translation="MTPTIELICGHRSIRHFIDEPISEAQREAIINSARATSSSSFLQ
                     CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMAQNALTAAESLGLGGVYIGGLRNNIEAVTELLKLPQHVLPLFGLCLGWP
                     ADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR
                     TIIKESRPFILDYLHKQGWATR"
     gene            complement(26644..26931)
                     /locus_tag="OQQ26_002104"
     CDS             complement(26644..26931)
                     /locus_tag="OQQ26_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1418 family protein"
                     /protein_id="HCS1857558.1"
                     /translation="MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
                     QILMIFLGVLLMLPAAVVVIIQVAKRLAPQLMNRPTQYSRSEREKDNDPNH"
     gene            27091..27348
                     /gene="grxA"
                     /locus_tag="OQQ26_002105"
     CDS             27091..27348
                     /gene="grxA"
                     /locus_tag="OQQ26_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 1"
                     /protein_id="HCS1857559.1"
                     /translation="MQTVIFGRPGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
                     KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
     gene            complement(27378..27755)
                     /locus_tag="OQQ26_002106"
     CDS             complement(27378..27755)
                     /locus_tag="OQQ26_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YbjM"
                     /protein_id="HCS1857560.1"
                     /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
                     FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
                     CALGALCFLFISRLFKPQHRKNQ"
BASE COUNT         6919 a         7214 c         6909 g         6845 t
ORIGIN      
        1 gtactggccg caggcttccc ggaattaggc attggttttg ccggcgtggc gctggcattt
       61 ggtttgaccg ttctgacgat ggccttcgct gttggtcata tttctggtgg tcattttaac
      121 ccggcggtca ctattggttt atgggctggc ggacgtttcc cggcaaaaga agtcgttggc
      181 tacgtaattg cccaggttgt cggcggtatt gttgcagcgg cgctgctgta tttaattgcc
      241 agtggtaaaa cgggttttga cgcggcagcc agcggttttg cttctaacgg ttatggcgag
      301 cattcaccag gcggttattc catgctttcc gcgctggtag ttgaactggt attgagtgcg
      361 ggcttcctgt tagtgatcca cggtgcaacc gacaaatacg ctccggcagg ttttgcgccg
      421 atcgctattg gtctggcctt aaccctgatt cacttaatca gtattccggt gactaacact
      481 tctgttaacc cggcgcgcag caccgcggtt gctatcttcc agggcggctg ggcattagaa
      541 caactgtggt tcttctgggt ggtgccaatt gtcggcggca ttatcggtgg tctgatttac
      601 cggaccctgc tggaaaagcg tgattaatta gcattggcat tttatctgcc ctggttgttt
      661 tatcttcgac attacaaacc gcacgggtat tggtggcgtc aaaatcgctg aagcgttccc
      721 cgaaggccgg ggcagcccac atggatgtgg gctgagggcg cgtcttacag gacgttacct
      781 cgcgcccgac ccggttgccg aaggggataa gctgaaggta ccgcgcagcg gcgattttgt
      841 tcgccagagc ccgggggtgc agggggcggc ggcgactggc tgccccctgc gcgctccctc
      901 cgccagtggc tttatatggc attgcacatg aaaggagcgc aacaatgcta aacactcaga
      961 taggattaaa aatccccctc tgatgcataa catttccttt taattgcaac tttactcgtc
     1021 cttccgcttt cagtagtgtg tcatcgcgca tttcgacttc atctttgcaa ggactgggtt
     1081 ttcatgtttt ctgggctgtt aatcattctg gttcccctga ttgtgggtta cctcattccg
     1141 cttcgccaaa aagctgcatt aagagttatt aatcagctat taagctggat ggtttacctt
     1201 attctctttt ttatgggtat cagtctggcg tttctcgata acctcgccag taacctgttg
     1261 gcgattctgc attattctgc tgtcagtatt accgttattt tactgtgtaa tattgccgcc
     1321 ctgatgtggc tggagcgagg cctgccatgg cgcaatcacc atcagcaaga aaaactcccg
     1381 tcgcgtattg cgatggcact ggagtcgctg aaactgtgtg gcgtcgtggt gattggtttt
     1441 gctattggcc ttagcggatt aggtttttta cagcacgcga ccgaagccag tgaatacacg
     1501 ttaattctgc tacttttcct cgtcggtatt cagttgcgca ataatggcat gaccttaaag
     1561 cagattgtcc ttaatcgccg gggaatgatt gtcgccgtgg tggtggttgt cagttcatta
     1621 attggtggtt taattaacgc ctttattctt gatctcccca tcaataccgc gctggcaatg
     1681 gcctctggtt tcggctggta ttctctttcc ggtattttat tgaccaaatc ttttggtccg
     1741 gtaatcggga gcgcggcgtt ttttaatgat ctggcccgtg agctgattgc aattatgttg
     1801 atccctgggc tgattcgccg cagccgctct accgcactgg gcttatgcgg tgcgacgtcg
     1861 atggatttca ccctgcccgt tcttcaacgt actggcgggc tggatatggt cccggcggca
     1921 attgttcacg gttttattct tagcctgtta gtgccgatcc tcatcgcctt tttctctgcg
     1981 taatacctct ctggcggtag atccctgccg ccaaaattgc gctaaatcaa tctcccttaa
     2041 agttgcatga aaaatccctt ttatccccgc gttaagcgtc ttaaccttaa acatgtatat
     2101 taaatataac tttaaaaggt gtgatcatgt tttgtgtgca atgtgaacaa actatccgta
     2161 ctccggcagg aaacggctgc tcatacgcgc aggggatgtg tggtaaaacg gcggaaacct
     2221 ctgaccttca ggatttactc atcgcggcgc tgcaagggct ttcggcctgg gcggtaaaag
     2281 cgcgtgaata cggcatcatc aaccacgatg tagacagctt tgcgcctcgg gcatttttct
     2341 caaccctgac caacgttaac ttcgattctc cgcgtattgt cggctacgct cgtgaagcga
     2401 ttgccctgcg cgaggcgctg aaagcgcaat gcctggcagt agatgctaac gcccgcgtcg
     2461 ataacccgat ggctgacctg caactggtga gcgacgctct cggcgagctg caacgtcagg
     2521 cagcagaatt tacccctaac aaagataaag cggcgattgg cgaaaacatt ctcggcctgc
     2581 gtctgctgtg cctgtatggc ctgaaaggtg cggcggccta tatggaacac gcgcatgttc
     2641 tcggtcaata cgacaacgat atttatgccc aatatcataa aatcatggcg tggctgggga
     2701 cctggcctgc cgatatgaac gcgcttcttg agtgttcaat ggaaatcggc cagatgaact
     2761 tcaaagtgat gagcattctg gatgcaggcg aaactggtaa atacggtcac ccgacgccaa
     2821 cccaggtcaa cgtcaaagcg acggcgggta aatgcattct gatttccggt cacgatctca
     2881 aagatctcta caacctgctg gaacagaccg aaggcacggg cgttaatgtc tacacccacg
     2941 gcgaaatgct gcctgcgcat ggctacccgg agctgcgtaa attcaagcat ctggtcggta
     3001 actacggcag cggctggcag aatcagcaag tggagttcgc tcgtttccct ggccccatcg
     3061 tgatgacctc gaactgcatc atcgacccaa ccgtaggcgc ttatgacgat cgtatctgga
     3121 cccgcagcat tgttggctgg ccgggtgtgc gtcatctgga tggcgaagat ttttctgcgg
     3181 tcatcgccca ggcgcaacaa atggcgggct tcccgtacag cgaaattccg cacctgatca
     3241 ccgtgggctt tggccgccag acgctgcttg gcgcagcgga tacgctgatt gatctggtga
     3301 gccgtgaaaa actgcgtcat atcttcctgc ttggtggctg tgacggcgca cgcggcgagc
     3361 gccactactt caccgatttc gccaccagcg tgccggatga ctgcctgatc ctgaccctcg
     3421 cctgtggtaa atatcgcttt aacaaacttg agtttggcga tatcgaaggt ctgccgcgtc
     3481 tggtagatgc aggtcaatgt aacgatgctt actcagcgat tattctggct gtcactctgg
     3541 cagagaaact gggctgcggt gtcaacgatc tgccgctgtc gctggtgctc tcctggtttg
     3601 aacagaaagc gatcgtcatt ctgctgacgc tgctttctct gggcgtgaaa aatatcgtca
     3661 ccggcccgac tgcacctggt ttcctgacac cagacctgct ggcggtgctg aacgagaaat
     3721 ttggcctgcg ttctatcacc actgttgaag aagacatgaa gcaactgttg agcgcgtaag
     3781 gagtttgtcg atgacgatgc caacgaatca atgcccgtgg cggatgcagg ttcatcacat
     3841 tacgcaagaa acgccggatg tgtggacgat ttccctgatt tgccacgatt actacccata
     3901 tcgcgccggg caatatgcgc tggtcagcgt acgaaactca gcggaaacgc tgcgtgctta
     3961 caccatttcc tccacgccag gcgtgagtga atacatcacc ctgaccgtgc ggcggattga
     4021 tgacggtgtc ggctcccagt ggctgacgcg cgatgtaaaa cgcggtgatt atctctggct
     4081 ttcggacgcg atgggggaat ttacctgcga cgataaagca gaagataaat tcctgttgct
     4141 ggcggcaggc tgcggcgtca cgccgattat gtcgatgcgt cgctggctgg cgaagaaccg
     4201 tccacaggcc gatgtgcagg tgatctacaa tgtgcgtacc ccgcaggatg ttattttcgc
     4261 cgatgagtgg cgtaactatc cggtaacgct ggtggcagaa aataacgtta ccgaaggctt
     4321 tatcgctggt cgtctcactc gcgaactgct ggcaggtgta cctgacttag cttcacgtac
     4381 cgtgatgacc tgcggcccgg ctccgtatat ggattgggta gagcaggaag tgaaagcgct
     4441 cggcgtgacg cgtttcttta aagagaaatt cttcacccca gtagcggaag cggcgaccag
     4501 cggtctgaaa ttcaccaaac tgcaaccggc acgagaattt tacgccccgg taggcaccac
     4561 gctactggag gcgctggaaa gcaataacgt tccggttgtc gccgcctgcc gggcgggtgt
     4621 ttgcggctgc tgtaagacga aagtggtttc cggtgaatat acggtgagca gcacaatgac
     4681 gctgaccgac gccgaaatcg ctgaaggtta cgtactggcc tgctcctgcc atccgcaggg
     4741 ggatttggtt ctcgcataat cgccttatgc ccgatgatat tcctttcatc gggctattta
     4801 accgttagtg cctccttttt ctcccatccc ttccccctcc gtcagatgaa ctaaacttgt
     4861 taccgttatc acattcagga gatggagaac catgaaacaa acggttgcag cttatatcgc
     4921 caaaacactc gaatcggcag gcgtgaaacg catctgggga gtcacaggcg actctctgaa
     4981 cggtcttagt gacagtctta atcgcatggg caccatcgag tggatgtcca cccgccatga
     5041 agaagtggcg gcgtttgccg ctggcgctga agcacaactt agcggagaac tggcggtctg
     5101 cgccggatcg tgcggccccg gcaacctgca cttaatcaac ggcctgttcg attgccaccg
     5161 caatcacgtt ccggtactgg cgattgccgc tcatattccc tccagcgaaa ttggcagcgg
     5221 ctatttccag gaaacccacc cacaagagct attccgcgaa tgtagtcact attgcgagct
     5281 ggtttccagc ccggagcaga tcccacaagt gctggcaatt gctatgcgca aagcggtgct
     5341 taaccgtggc gtttccgttg ttgtgttacc gggcgacgtg gcgttaaaac ctgcgccaga
     5401 aggggcaacc acgcactggt atcatgcgcc acagccagtt gtgacgccgg aagaagaaga
     5461 gttacgcaaa ctggcgcaac tgctgcgtta ttccagcaat attgcactga tgtgtggcag
     5521 cggctgcgcg ggggcgcata aagagttagt tgagtttgcc gggaaaatta aagcacctat
     5581 tgttcatgcc ctgcgcggta aagagcatgt cgaatacgat aatccgtatg atgttggaat
     5641 gaccgggtta atcggcttct cgtcaggttt ccataccatg atgaacgccg acacgttagt
     5701 gctactcggc acgcaatttc cctaccgtgc gttctacccg accgatgcca aaattattca
     5761 gattgatatc aatccagcca gcatcggcgc tcacagcaag gtggatatgg cactggtcgg
     5821 cgatatcaaa tcaaccctgc gtgcattgct gccactggtg gaagaaaaaa ccgatcgcaa
     5881 atttctggat aaagcgctgg aagattaccg cgatgcccgc aaagggctgg acgatttagc
     5941 taaaccgagc gagaaagcca ttcacccgca atatctggcg cagcaaatta gtcattttgc
     6001 cgccgatgac gccattttca cctgtgacgt tggtacgcca acggtgtggg cagcgcgtta
     6061 tctgaaaatg aacggcaagc gtcgcctgtt aggttcgttt aaccacggtt cgatggctaa
     6121 cgccatgccg caggcgctgg gcgcgcaggc aaccgagccg gaacgtcagg tggtcgccat
     6181 gtgcggcgat ggcggtttta gcatgttgat gggcgatttc ctctcggtag tgcagatgaa
     6241 actgccggtg aaaattatcg tctttaataa cagcgtgctg ggctttgtgg cgatggagat
     6301 gaaagccggt ggctacctga cagacggtac tgagctgcac gacaccaact ttgcccgcat
     6361 tgccgaagcg tgcggaatta cgggtattcg tgtagaaaaa gcctctgaaa tcgatgaagc
     6421 cctgcaacgc gccttctcca tcgacggtcc ggtgttggtg gatgtggtgg tcgccaaaga
     6481 agagttagcc attccaccgc agatcaaact cgaacaggcc aaaggtttca gcctgtatat
     6541 gctgcgcgca atcatcagcg gacgcggcga tgaagtgatc gaactggcga aaacgaactg
     6601 gctaaggtaa aaagggtggc atttcccgtc ataataagga catgccatga ttgatttacg
     6661 cagtgatacc gtaacccgac cgagccgcgc catgctcgaa gctatgatgg ccgccccggt
     6721 tggggacgac gtttacggag acgaccctac cgttaatgct ctgcaggact atgcagcaga
     6781 gctttccggt aaagaagccg ccatttttct gcctaccggc actcaggcca acctggtcgc
     6841 tctgctcagt cactgcgaac gtggcgaaga gtatattgtc ggtcaggccg cgcataacta
     6901 tctgtttgaa gccggtggcg cagcggtgct gggcagtatt cagccgcaac ccatcgacgc
     6961 ggctgccgac ggcacgctac cgctggataa agtggcgatg aaaatcaaac ccgacgatat
     7021 ccatttcgcc cgcaccaaat tactcagtct ggaaaacacc cacaacggca aagtgctgcc
     7081 gcgtgaatac ctgaaagaag catgggaatt tacccgcgag cgaaatctgg cgctgcatgt
     7141 tgacggcgcg cgcatcttta acgccgtggt ggcttacggc tgcgaactga aagagattac
     7201 gcaatattgt gattcgttca ccatttgcct gtcgaaaggt cttgggacgc cagtcggttc
     7261 attactcgtc ggcaatcgtg attacattaa acgtgccatt cgctggcgga aaatgacagg
     7321 tggcgggatg cgccagtccg gcattctggc tgccgccggg atgtatgcgc tgaaaaataa
     7381 cgtcgcacgc ttgcaggaag accacgacaa cgccgcctgg atggcggagc agctgcgtga
     7441 agcaggcgcg gatgtgatgc gtcaggacac caatatgctg tttgttcgcg tcggggaaga
     7501 aaatgctgcc gcgttaggcg aatacatgaa agcgagaaac gtactgatta acgcctcacc
     7561 gattgtccgc ctggtgacgc atcttgacgt ttcgcgcgaa caactggcgg atgtcgccgc
     7621 ccactggcgc gcattcctgg cgagttaagg agagagacgt gccgcaacgc attttagttc
     7681 tcggtgccag tggctacatt ggtcaacatc tggtgcacac actcagccag caagggcatc
     7741 agattctggc ggcggcacgt catgtcgaca ggcttgcaaa gctgcaactg gcaaacgtca
     7801 gttgccataa agtcgatctc agctggccgg ataaccttcc ggccctgttg caggatatcg
     7861 ataccgtcta ttttctggtg cacagcatgg gcgaaggcgg cgattttatc gctcaggagc
     7921 gccaggtggc tctcaacgtc cgcgatgcgc tacgtgaagt accagttaag caattaatct
     7981 ttctcagttc gttacaggcc ccgccacatg agcagtcgga ccatctgcgc gcccgtcagg
     8041 ctacggcgga cattctgcgt gaagcgaatg taccagtgac cgaactgcgg gccggaatta
     8101 tcgttggcgc aggttcagca gcgtttgaag tcatgcgcga tatggtctac aatctgccag
     8161 ttttaacgcc gccacgctgg gtacgttcac gcaccacgcc cattgcgctg gaaaacttgc
     8221 tgcactatct ggtggcgctg ttagaccatc cagccaacga acaccgcatc ttcgaagccg
     8281 ccggaccaga ggtgctcagt tatcagcaac agtttgaaca ttttatggcg gtgagcggta
     8341 agcgccgctg gttgatcccc atccccctcc ccacccgctg gatttcggtg tggtttctca
     8401 atgtgattac ttccgtaccg cccaccaccg ccagggcgtt gattcagggg ctgaaacacg
     8461 atttgctggc ggatgactcc gcgctacgtg cgctcatccc acaacggctg atcgctttcg
     8521 atgacgcggt acgtagcacg ttgaaagagg aagaaaaact ggtcaactcc agcgactggg
     8581 gctacgacgc tcaggccttt gcccgctggc gaccggagta cggttatttc gccaaacagg
     8641 cggggtttac cgttaaaacg tccgccagcc ttgcggcttt atggcaggtg gtgaaccaaa
     8701 tcggcggtaa agagcgttat ttctttggca atattttgtg gcagacacgg gcgttgatgg
     8761 accgcgcgat cggtcataag ctggcgaaag gccgcccgga gcgcgaatat ttacagactg
     8821 gcgatgcggt ggatagctgg aaagtcattg tcgttgaacc ggaaaaacaa cttacgttgt
     8881 tatttggcat gaaagcgccg gggctgggac gactgtgttt taccctggaa gataaaggcg
     8941 actatcgtac tatcgatgtt cgcgctttct ggcatccgca cgggatgccg gggttgtttt
     9001 actggttatt gatgatcccc gcgcatctgt ttatttttcg cggaatggca aaacaaatcg
     9061 ccagactggc agaacaaagc acagattaat cgacaaaacc tgcgttattc tttcatgttt
     9121 cccattgcat catgggggaa atcacggaag aatgcgcacg tcattttctc aacaacagtg
     9181 gattgatatg aaggtactgg ttaccggcgc caccagcggc ttaggtcgaa acgcggtaga
     9241 gtttttatgc cagaaaggca tcagcgtgcg tgcgaccggt cgcaacgagg caatgggtaa
     9301 attgctggaa aaaatgggcg cagagtttgt tccggcggat ctgaccgagc tggtctcatc
     9361 acaagctaaa gtgatgctcg cgggcattga tacgctgtgg cactgctcca gctttacctc
     9421 gccctggggg acacaacagg ctttcgatct ggctaacgtt cgcgccactc gccgcctggg
     9481 tgaatgggct gtcgcctggg gtgtgcgtaa ctttattcat atctcttccc cctccctgta
     9541 cttcgattat caccatcatc gcgatattaa agaagatttt cgccctcacc gcttcgctaa
     9601 cgagtttgcc cgcagcatgg agcgtttagg tcgcaagtca gcaaaagagc cgccgctgac
     9661 ccactacggc gtctccaagt tgaattttga ctttacgctg gatattacgc gtgcacagga
     9721 agaattaggt tatcagccgg tcatcaccct ggatgaaggt atcgagaaaa ctgccgcctg
     9781 gctacgcgac cacggaaaac tgccgcgcta atcctgcccg tatttctcca gcaacgcttc
     9841 ggcaattgcc tgagtttctg catccgcttc gccgttgtat aacgtcgggc ggaaatgcat
     9901 ctggaacgcc ataatcacgc gccgctgctc gcgcggtgtc atatcaggtt taacgtcata
     9961 accgtagcgc gccaaaagct ccagcaatga cgcggtatct accggtgtgt gcggcgcgcg
    10021 cccggcaagg taaaagttca cccgctgcgc atccggccag gcaccaatcc cctgctgcgc
    10081 cagttgctgc cagggaaata atggccccgg atcgtctttg cgctgcggtg cgatatccgc
    10141 atgtgccact acgttttccg gcttgatgtg ataacgggca ataatatctt tcgccagtgg
    10201 aataagcgcc tgaatctgtg ccggttcaaa cggggcaaaa tatttcactc cggccgattt
    10261 ttgccagcca cggttttcca gctcaatgcc aatagaggtg tcgttaaggc gcgttgcccc
    10321 gcgccaggcg ctaatccccg catgccaggc cagttcttgt tccggcacca gttgccagat
    10381 gcgcggttta ccgttgtatc gcggtggcac cgcagggacc agataatgcg agctgacctg
    10441 cttatcggtc aatgtcgcca gcgagctatc aaaatcatct gcggtgtagt ggatcaccag
    10501 cactttaatg cgcggatacg ccgcctgcgc ctggtgtcgg gtatcaagct gatatccctc
    10561 tttctcgaca atgccttttt cgcctgcaca ccctgccagt aacagagcgg cagcgaccag
    10621 ccagaagact cttctcatcg acgcgttttc accgccgtac cgctgacgct aaccatcagc
    10681 atactgccgt tttgcccgac cgtttcgtag tcgatatcaa taccgacgac ggcatcggcc
    10741 cccagcgccc gggcctggga gccaagttcc tcaaaggcga tctcccgcgc tttgcgcagt
    10801 tctttttcat acgcatcgga gcgtccgcca acgatatcgc ggataccggc aaagaaatca
    10861 cggaaaatat tggcacctaa aatcgcttcg ccggtcacca caccgcaata ttcaacgatg
    10921 gtctggcctt ccagagttgg ggttgtagaa aattgcatga tcgatctcct tgtttgttaa
    10981 gccttcgatc tctaaagcat tatcggactg atatgccatg ttgggaagaa ggttttgatc
    11041 agtttaggaa atcatctcat tgtgtcaaaa acaccaactt aagcctttac gattatccgt
    11101 tgcataaccc gatattggtt tcattatagg gtaccactta cctgtcttat tatgttgcac
    11161 caacaacatt aatgagtggg aagagtcaac ttatattgta aatgattcct aaagtcttcc
    11221 ccatcttgcg cctgaggtat ataccgctgg attgcttttt ggtcagccgc cgcaaaacaa
    11281 gaaagtaata agatctcaat gcttttatca ttaatataag cgaagatcat tcttgcaaac
    11341 tcgtatataa acgcccgatc ctgagcgctt aatagtttaa tacaatattt atttttaaga
    11401 gagaaaataa tttcaaggaa agcatccgca gcaaccttca cgttattccc ggcgttcata
    11461 ttatatatat cccttgcgca gatagagtac agagatagta aacagccata caaataatca
    11521 cttattaatt cttttgtcca ttttacaggc aaccagggtt ttatcttgac accatgcata
    11581 ctacagtcat gaaaaagaca tttgctgaaa ttaactctta tcatatcaac attgaaaaaa
    11641 ttgcagttaa taaattttaa agaatgagta tttacgttgt tgattttaat agatctaaac
    11701 gaaacatttt tgaatacatt atttattata ttgctatttg ttattttaac atcacctaaa
    11761 ctgccgtttt caaaacaaca ttttttcaat atgctttcat tcacaacagt gtgtgataaa
    11821 tagagattac ttatgttttg ctttattaat gccacgtcat caaaatgact atatttaatg
    11881 aaacaaccat cattgagtag tgttttaaga ttgactaaat tacttgcatc ttcacgtacc
    11941 atcgtggcaa ctggaacagg cagagacatg aaaacttctt cattcaccat caagtgaatc
    12001 atgcattgcg ttccctttgt catatccaca cttacgctac aaatatcgtg gtaatgcgaa
    12061 gagtgcattt caggaaacag attaaacacg gtatcttgaa aggcactaaa tcgtgttaat
    12121 aaatcctgat aatgaacagg ttttgtttca aaattatcat cagcaaatcc aagcactatt
    12181 gtatgctcta catctaacgc agtttcaaat gactcttctt ctgtaaaatc attatttaaa
    12241 acctcacctg acgtattatc actgtcataa aaagtgctca tcaatgcgat attttttgtt
    12301 acagcgtctt tttcgatatt ctcactaata gcatatcgcc tgctataatc ataaaaatga
    12361 ataaacgcgt cctttataag tgatatatat tcttctttgt taaagtcaat acgactgtat
    12421 aacttttcaa aaatcacatt cgcaatctta ctaccaatgg tatacctgta taataatggg
    12481 tgcgattcaa tcgtaaaatg cttatctaat tgttcttgta atttattctc atagtccagt
    12541 gggaaaagaa actattgtct ttcaagtttt ccattcgata cattacgtat tccaatagag
    12601 attctttcat tacccgcttg tatttcaact tcgttatctt ctgatttacc cagatatttt
    12661 ttaacatcag tctcgaaagc attgctaaaa aatgtattaa attggtaatt cgctgatgga
    12721 atattttccg cgagcaacac atcatttttt atgagatcac tgtcagcatt tattgctaat
    12781 atcagatgca agtagatggt atcccatgta gacaactcac ccttacgact ggaatttaat
    12841 atcgcgaaaa attccctcag tgaatccagg aaattatcat tttgattcag ttgtgtgctt
    12901 gaaaatgatg acgcatgttc agatatattg tttatcatat taaaaatcac ccaaggaaaa
    12961 tataatctac cgaactcctc gtgctttatt attataaaag cacgacgcct tttatactca
    13021 tattaataaa cgaaacactg aaataactcg atttattctt cgctcaaact cataagctta
    13081 aattgtttac ccacaattgt agcataaata atattatcga gagtcaaagc tgggactatc
    13141 aaatttcgct cattttcaaa aatacaatga aattttggca atcatcttaa tcgcaggatt
    13201 tcttatcgca tgtgaaaaat tttgtaatga ttagacaata accgcgttca tttatcacgc
    13261 gttataaatg tgaaactggc ttcttgcaga tgctcttaac ctctacagga ggatttatac
    13321 caccatttca gaactatcat atttacctta aatgatcatt tcagcatata acacgctcaa
    13381 cctcacaaat ggtttacact gtctattgtt tgggtaattt aagtaagtca gctacgagca
    13441 accttgagtg ggtcgccagc aatggactca aacccaatca ggtgttcaga ttgtttcaga
    13501 attgtattaa aaacaatgta ttaaataatc tgatagcgtt tggtcgtagt gtgacgcaga
    13561 cagcaagcta ataaggaaat gattatgcgc taccgttcac tatctctact tattccatgt
    13621 gcactgctgc tgagtgcctg taccaccgtc acgccagctt ataaagataa cggcccccgc
    13681 accggttcct gtgtccaagg ggggcctgac agcgtggccc aacaattcta tgactaccgc
    13741 attcaacatc gcagcaatga cattaccgcc ctgcgcccct atttgagtga caaactggca
    13801 acccaactta gcgatgccag ccgcgataat agtcatcgtg aattgttaag cagcgatccg
    13861 ttctccagtc gaaccacctt gccagacagc gcccacgttg ccagtgcatc gactatccct
    13921 aatcgtgatg cccgtaacat tccattgcgg gtggatctca aacagggtga ccagggctgg
    13981 caggatgaag tgttaatgat tcaggaaggc cagtgttggg tcatcgacga tgtgcgctac
    14041 ttaggcggta gcgttcatgc cacggcgggt acgctccgtc agtccatcga gaatcgctaa
    14101 cgccttgatc aaccaataaa ccccgtaaat tgtccggcat ttcgtgagga atgccgacat
    14161 ttatgctcac cgaccaccgc ccccgttatt ttgtgctatg tttattgaat aatgcgcttt
    14221 gcttttaact tttaaagcag aaatattgca taattattct gtcaaaggta ctatcttcga
    14281 cctcaatagc tatcagactg ccagtatacg agtgtcaatg agtattcaat taaacggcat
    14341 taattgcttc tacggcgcac atcaggcgct gttcgatatc acgctggatt gcccacaggg
    14401 cgaaacgctg gtgttacttg gccccagcgg cgcgggtaaa agctcgctgc tgcgtgtact
    14461 caatctgctt gagatgccgc gctccggtac gctcaacatt gcaggcaacc atttcgattt
    14521 caccaaaaca ccctcagaca aagcgattcg cgatttgcgt cgtaacgttg gcatggtgtt
    14581 tcagcaatac aacctgtggc cgcatctgac cgtgcagcaa aacctgattg aagcgccctg
    14641 ccgtgtactg gggttgagta aagatcaggc gctggcccgt gcagaaaaac tgctggaacg
    14701 tctgcgtctc aaaccttata gcgatcgtta cccgctgcat ctttctggtg gtcagcagca
    14761 gcgtgttgct attgcccgtg cgttgatgat ggagccgcag gtactgctgt tcgatgaacc
    14821 gaccgccgca ctggacccgg aaattacggc acaaatcgtc agcatcattc gtgagctggc
    14881 agaaacgaat attacccaag tgatcgtcac ccacgaagtt gaagtggcgc gtaaaaccgc
    14941 cagccgagtg gtgtatatgg aaaacggtca tatcgtagaa caaggcgacg cgagctgctt
    15001 taccgagccg caaaccgaag catttaaaaa ctatctctct cactaagatt cgggataaca
    15061 acaatgaaaa aagttctgat tgccgcgtta attgcaggtt ttagtctttc cgccacagct
    15121 gccgaaacca ttcgttttgc taccgaagca tcctatcctc cgtttgaatc gattgatgca
    15181 aacaaccaga tcgttggttt tgacgtcgac ctggcacaag cgctgtgtaa agagattgat
    15241 gcaacctgca ctttctctaa ccaggcgttt gacagcctga tcccaagcct gaaattccgt
    15301 cgcgtagaag ccgtgatggc gggcatggat atcactccgg agcgtgaaaa gcaggtgctg
    15361 tttaccaccc cgtactatga caactctgcc ctgtttgtgg gtcagcaagg caaatacacc
    15421 agtgttgatc agctgaaagg caaaaaagtc ggcgtacaga acgggacgac acaccagaaa
    15481 ttcattatgg ataagcaccc ggaaatcacc accgttccgt atgacagcta ccagaacgca
    15541 aaactggatc tgcaaaatgg tcgtatcgac agcgtatttg gtgacaccgc agtggtaact
    15601 gaatggctga aagataaccc gaaactggcg gcagtgggcg ataaagtgac cgataaagat
    15661 tacttcggta ctggtctcgg catcgcggta cgtcagggca acactgagct gcagcagaaa
    15721 ctcaacactg cactggaaaa agtgaagaaa gatggcactt acgaaaccat ctacaacaaa
    15781 tggttccaga agtaattcct gatgaatgaa ttttttcctt tagcaagcgc cgccgggatg
    15841 accgtcggcc ttgccgtttg tgcattgatt gtcgggctgg cgctggcgat gttctttgcg
    15901 gtatgggagt cggcaaaatg gcgtcctgtc gcgtgggcag gttcagcgct ggtaaccatt
    15961 ctgcgtggcc tgccagaaat tctggtggtg ctgtttatct attttggttc ctcgcagctg
    16021 ctgctgacgc tttcggatgg cttcactatc aatcttgggt tcgtgcagat cccggtgcag
    16081 atggacattg agaacttcga cgtgagtccg ttcctttgtg gtgtcatcgc tctgtcactg
    16141 ctgtatgccg cctatgcctc gcaaacgctg cgcggcgcgt tgaaagcggt gccgatgggt
    16201 cagtgggaat ccggccaggc gctggggctg tcgaaatcgg ctatcttttt ccgtctggtg
    16261 atgccgcaga tgtggcgtca tgcgctgcct ggcctcggta accagtggct ggtgctgctg
    16321 aaagataccg cgctggtcag tttgattagt gtgaatgatt taatgctaca aaccaaaagc
    16381 attgctactc gtacccagga accatttacc tggtacattg tggcggcggc gatttacctg
    16441 gtgatcaccc tgctcagtca gtacattctc aaacgcattg acctgcgcgc gacacgtttt
    16501 gagcggaggc ccagctaatg tttgagtatt tacccgaact gatgaaaggg ctgcacacca
    16561 gcctgacgct aaccgttgcc tcgctgattg tggcactgat tctggcattg atttttacca
    16621 tcatcctgac gctgaaaacg ccggtgctgg tgtggctggt tcggggttat atcacgctgt
    16681 ttaccggtac gccgctgctg gtgcagatct tcctgattta ttacgggccg agccagtttc
    16741 cgacgttgca ggagtatccg gcactgtggc atttgttgtc agaaccgtgg ttatgtgcgc
    16801 tgattgcgtt atcgctgaac agtgcggcgt ataccacgca gctgttttac ggtgcaattc
    16861 gtgcgatccc ggaaggtcag tggcagtcct gtagcgccct gggaatgagc aaaaaagata
    16921 cgctggcgat cctgctgccg tatgccttta aacgctcgct ctcttcttat tccaacgaag
    16981 tggtgctggt attcaaaagt acctctctgg catacaccat tacgctgatg gaagtgatgg
    17041 gatacagcca gttgttgtac ggacgcacct acgatgtaat ggtgttcggt gcggcaggga
    17101 ttatttacct ggtcgtcaac ggcctgctga cgctgatgat gcgtctgatc gagcgcaaag
    17161 cactggcatt cgaacggcgg aattaatgta gctgcatgct gatgccggat gcggcgtgga
    17221 cgccttatcc ggcccacaca gtgcataaat tcttataatg aagacggaca actcactaag
    17281 ttgtccgtct ttttttattt catttaaatt atttaatcat atttattgca tataaattca
    17341 cttggtaaca ttgttatccc atgccgcaga cacggccaaa aatcataaga ttgacagacg
    17401 ggagttccat catgaaaaag ttagttcttg ccgctttact tgcttccttt actttcggtg
    17461 cttctgccgc agagaaaatc aattttggcg tttcagccac ctatccaccc tttgaatcta
    17521 taggtgctaa taatgagatt gtcggctttg atatcgatct ggcaaaagcc ttgtgcaaac
    17581 aaatgcaggc agaatgtact tttactaatc acgcgttcga cagcctgatc ccgtcactga
    17641 aattcagaaa atatgacgcc gtaatctccg gtatggatat cacgccggag cgtagcaaac
    17701 aggtatcgtt taccacgccc tactatgaaa actcagccgt cgtgattgcc aaaaaagata
    17761 cctacaaaac gtttgccgat ctgaaaggca aacgtattgg gatggaaaac ggcaccacgc
    17821 accagaaata tattcaggat cagcacccgg aagtgaaaac tgtctcctat gacagttatc
    17881 agaatgcctt tatcgatctg aaaaatggcc gtattgatgg ggtatttggt gacacagcgg
    17941 tggttaatga atggctgaaa accaacccgc aactgggcgt tgcgactgaa aaagtgaccg
    18001 atccgcaata cttcggcacc ggcctgggta tcgctgtacg tccggataac aaggccttgc
    18061 tggaaaaact gaataacgcg ctggcagcaa ttaaagctga cggtacttat cagaaaatca
    18121 atgaccagtg gttcccacag taagattcag aaagccgcac ctgcggcttt tttattgctt
    18181 caccagcagc gtcatcactt catagtgcgc ggtgtgcggg aacatatcaa aaagctgtac
    18241 ccgttcgatg cggtaacctg gcagttcgcg gatatctttc gccatggttt gggcgttaca
    18301 gctggagtag ataataaaac gcggtgccat cgttgagaga taatcacaca gcggtttacc
    18361 aatgccgcgg cgcggcgggt taaccagcac cagctccggc acctccccct gagcggtggc
    18421 aaactgagtg gagtccagcg cctgaaattg caaacgcgtt aagcccagtt cagcggctga
    18481 ctgctttgca caggcaatgg cctctggcgc aatttcgatc ccggttaact gcatgtcagg
    18541 cgtcgcgcag tgtaaaccaa agccacccac accgcagaac agatcccaca tatgtttaac
    18601 cggcagctgt cgtacccagt cgcgcgcggt ggcgtacagc tggctggcga ccgccggatt
    18661 agtctggaag aaactttgcg gacggatcca cagcggtacg tcattaaaac gctctaccag
    18721 tgcctgttgt tcggtcaggt agatctccgt ctccccttcc ataatcgcca tatgtaccgg
    18781 ctgaatattg acggtaataa cttttagctg cggtagttgt tcctgtagcc acggtagcgc
    18841 cttacgcagt tgcgccagtt tggtttcgga acgcaacaca aaacgcagca tcatgccgcc
    18901 atcgctctgg ctttcagtta gcaaaatgta tttcagttcg ccacgcttac gcgccacgtt
    18961 ataaggcgtt agccccgctc gggcgataaa cggttttagc gccgcaaaaa caggcgcaaa
    19021 tgaggcagga taaagcgggc agtcgcaaag gtcttccggc gtgccgtctc gatgtagcat
    19081 accgagcagt ggtttttcaa cgctaccact caccaccatt ttggctttat tacgaaaccc
    19141 ttgctccggg ccagacaccg gcgcgcacca ttcctcaacc ggaaagtcgg cgagcagatt
    19201 tttaagatcg gcggttttag cggagagttg ctctggaatc ggctgcgtta tccactgaca
    19261 ggaacgacag cgacccgcgt cgtaaagtgc gcactgcata cattgacctt cacatcatca
    19321 ggggcgacga ttatacacat tattgcaact ggaagaaccg ccgactggtc gagggaacga
    19381 acagtagcat caggatgagc atatccggca atttctgcag catcaggcta tggaagattt
    19441 cacgttttga ttcaccggga atgctgaaca gctccggata accatacccc agcgaagccg
    19501 cccacaagta acttgcggcc gtgatttgtg tcagcagata aagccagcgc gcccagcgac
    19561 gccctttcac cagtgaaaac gcacaccaga tctcaatgaa aaccagcacc agactgctta
    19621 aaaagaccag cgttaaactc caggtttgta cgctgcgatg aatgaactcg ccaataccgc
    19681 gcacgcccag cgtattgaaa atcatcagca cgtcgaggcc acgaatcata ataatggcga
    19741 gcgccgccac ctgcaccagc gcaggcacat tcaggcgagc atgagatgaa gatgttttct
    19801 taaaaaatcc caacgtttcg tcttccatga aaacaatgcc gcgacatacg cggcattatg
    19861 tagccaggtt ggcaaatttt agtgtcttca gccacgtctt gcacgctgga tgtcgcgtat
    19921 ccgctgtttt tctgcgcgag ccatcagata ccaggcgata aatccgacaa ttccgaccgc
    19981 gccgaggatc aatgttgcca gggcgttgat ttccggattc acccccatcc gcacgctaga
    20041 aaagaccagc atcggtaacg tggtggctcc cggcccggaa acaaagctgg cgatcaccag
    20101 atcatcaagc gacaaagtaa aagccagtaa ccagccagaa atgatcgcgg gcatgatcat
    20161 cggtagcgta atgacgaaaa acactttcag cggcgtcgca ccgagatcca tcgcggcttc
    20221 ttctatcgag cgatctagtt cccgcaatct tgaagaaata acgaccgcca cataagccgt
    20281 acaaaaagtg acatgcgcca gccagatggt gagcataccg cggtccgcag gccagccaat
    20341 ggcatgagca agcgcgacga ataataacaa cagcgacaag cccgtgatga catctggcat
    20401 taccagcggc gcggtgatca taaaggcaaa gccatttgat ccgcgaaacc tgccaaagcg
    20461 caccagcacc accgccgcaa tagtcccgag gatcgccgcc gccgttgccg cacaggcagc
    20521 aattgtcagg cttaaaccaa ccgcactcat catcgcgtca tcgcgcaata actcaccata
    20581 ccagcgcatt gaccagccgg cccacaccgt caccagcttc gagctgttaa acgaatagat
    20641 aaccagcatc agcattggcg cgtagagaaa ggtaaagccc agcagcaaaa tcacaatccg
    20701 ccagggtgaa cgaactaccg gtaaattatt catccgtgtt ctcccacgct tttttgctgg
    20761 tgtttgtgga accacattat cggcacaatt agcagcagca acatgatgat cgctaccgcc
    20821 gaggccaccg gccagtcgcg gttattgaaa aactcttgcc atagcacgcg cccgatcatg
    20881 atgctgtccg ggccaccgag cagttccggg atcacaaact cgcccacagc cgggataaac
    20941 accagcatcg atccggcaat aatcccacct ttagtcagcg gcacgatcac agtaaagaac
    21001 gttttcagcg gtcgtgcacc gagatccagc gctgcttcca ccagcgaata atcaatacga
    21061 atcaacgcgg tataaatcgg cagtaccata aacggcacgt aagcgtaaac aatgccgata
    21121 taaacggcca gattggtatg cagaatggtc agcggttgat cgataacccc cagccacagc
    21181 agaaaattat tcagcacacc gttgtttttt aatattctca tccaggcata aacgcggatc
    21241 agaaacgagg tccacgacgg caggatcacc agtagtaata aaatattacg ggtcgaaggc
    21301 ttactgtgcg cccacgccag cggatagccg atcagtaaac agcaaaatgt cgaaatcgca
    21361 gccacctgta gcgactggag ataagcatcg aaatagagcg gatcgtcggt cagttgcagg
    21421 aaattaccga gattaagagt gatggacagt tgcccgtcag cccactccat cagttcggta
    21481 taaggtggaa tagcgcgcgc catctccgcc aggcttattt taaagacaat caaaaatggc
    21541 agcagaaaaa gcaagatcaa ccagatatac ggcaacgcaa tgaccagttt gcgcccatgc
    21601 ttcatttgca gctgcgacaa ccacagctta aatccgcccg gcggtttcga ctgggcagca
    21661 ggttcaagtg tactcatctt tgctccttaa accgtcagca ccacacagct gtccatttcc
    21721 cagcacaaac gcacttcgtc gccccaggtc ggtaaccctt tacgatgacg atgggcgttt
    21781 tgtagctggg cgctaatcat ctgcccactt ttcagacgaa cgtgatacac cgaaagatcg
    21841 ccgagatagg caatgtgtat cacctccccc accgcgaagt tacaaccatt ggcgggcggc
    21901 tcttcgcaaa gcatgatttt ttccggacgc agcgctacgt gtaccggcac gttatcgacc
    21961 actgaagcat ccgcatcgac tttcagtgga tgcaccagcc ccggcgaata aagcaccaga
    22021 ccatcttcct gacgctcttt gagtacacct tcaaagacat taaccgaacc gataaattca
    22081 gcgctgtagc gggtagtcgg atgctcgtag atctcttccg gctcgccaat ctggacaaat
    22141 ttcccacgat tcataatggc gatgcgcccc gccatggtca tcgcctcttc ctgatcgtgg
    22201 gtgaccatca cacaagtcac accgacgcgc tccagaatat ccaccacttc aagctgcatc
    22261 cggtcacgca gctttttatc cagcgcgccc atcggctcat cgagcagtaa tagtttcggg
    22321 cgcttggcaa ggcttcgggc cagggccaca cgctgtcgct gaccaccgga aagctgatgc
    22381 ggtttgcgtt tggcgaactc ctgcatatgc accaggccga gcatctcatt gacccgactg
    22441 gcaatttccg ctttcggtag tttgtcctat ttcaggccaa aagcgatgtt ctgttccacg
    22501 gtcatatgcg gaaacagcgc gtaagactga aacatcatat tgatggagcg caggtaaggc
    22561 ggtacctgtg acaaatcgac gccatcaagc attatctgcc cggcagaagg ttgttcgaaa
    22621 cctgccagca tacgcagcag cgtggacttg ccacagccgg atgcacccag cagcgtggac
    22681 ttgccacagc cggatgcacc cagcagcgcg aagatttcac ctttgtagat ggtcaggctg
    22741 acatcatcca ccgcatgttg accatcgtag gatttggtga ggttgcggat ttctaatagc
    22801 ggcgtcagcg ccttacgggt tttcgcctgc gggcgaggga tagcggcatt cacggctgct
    22861 ctccggcatt gaatgtgtgc agcgcaccat gatggtgcga attgccggcg ggtgtggttc
    22921 gcccgcccgg catctaaggc tgcggattat tttccgctct tcactttggt ccacgcgcga
    22981 gtgcgcacac ggtcgatttt cggatcctgt actttcagag tgaacaactt cgcgcggaca
    23041 tccgcaggcg gataaatacc cgggttatca cggacttccg cactcaccag cggcgtggct
    23101 gctttattgg cgttagcata gaacacatgg tcggaaatat gcgctactac atccgggcgc
    23161 agcaggtaat tcaggaactg ataggcttcg tctttgtttt tggcatccgc aggcatggcg
    23221 aatacatcaa agaatgccat cgccccctct ttcggaatcg agaacgagac attcacgcca
    23281 ttcttcgctt ccttcgcgcg gtttgacgcc tgccagacat cacctgccca accgatagcg
    23341 acgcaaatat cgccgtttgc caggtcgtta atgtattgag atgaatggaa ataacgaatg
    23401 ttcgggcgca gctttaacag cagatcggtt gccggtccgg tgtaatcatc cgctttagtg
    23461 ctgttgggat ctttgccgag ataattcagc acggtagcaa aaacttcttc tggcgcatcg
    23521 aggaaagaga caccgcagct tttcagtttt tccagatttt caggtttgag gatcaagtcc
    23581 cagctatcga cgggcgcgtt ttcgcccagc accgctttga ctttatcgac gttatagcca
    23641 atcccggtcg tcgcccacat atagggcata gcaaatttat tgtcgggatc gtgtttggcg
    23701 accagcttca gcagctccgg ggcgagattc ttccactccg gcaatttgct tttgtccagc
    23761 ggctggaaaa ctcccgcagt caactggcgt tcaagaaagc tggcagatgg aaccaccaga
    23821 tcaaagccgg tgctacccgc cattaatttg ccttccagta cttcgttaga gtcgaaaaca
    23881 tcgtagacga ctttaatacc ggtttctttt tcaaagttag ccaccgtgtc cggggcgata
    23941 taatcagacc agttataaat gtggagtgtt ttttgttcag ccgcgagcgt gccgacagag
    24001 acggccatca gagcacccgc aaccagaccc gatagccatt ttttatttaa ggcggtcata
    24061 tctctttcct tctgaaagtt cgttaacaaa cgaacaaaag ttgtcacact aaaagatatg
    24121 caataaacgt gcatattttt ttatcggcgc ggtgtaagaa aagagaactc tctcccggcc
    24181 agcactgctc gctatataaa agcatcgcaa gaataacttt agccagggtt tgagactata
    24241 gctcggatta aaaaacggta tttaacaaat ttttatgcgt atttgctcta tgtgataaag
    24301 ccaaatcgac acaagagaag tgaaataatc tttaagaaaa ggttaaaaac agcagataat
    24361 tttgcagcgc gcagtcactg cggcagcgac tgcgtgctcg aaaggagtta tcagtggagg
    24421 aaatagtttt cggtaacgtt gttttgccct tcatcgtcag tcggtaacag cagttgatgg
    24481 gcattagctt caagaatgac catcgaaatc tgctcttcgc tctgacgcac gaaccatgca
    24541 aactgctcat aggttacgcc ctgcataacg gataaagact ggcaaaccac cagctttggc
    24601 agattatcat cctgcatatc aagaaatgct ttcacggtca gcgaactggc attgatggca
    24661 gataaatccg ccgccagcgg caatacggct gaaggtcgga cttccgccat ggcagaaaac
    24721 aggatcgtgt gatcgatcag atcgattttg gcatcaaaga caccgtcgaa attctgcata
    24781 tggggcagat gcagagcctg acagttatca cattcaaaaa aactcatccc caggtcatcg
    24841 agccattgac gcagcgtatc cagaccagga acgaccagcg atgtcataat tttgtacaac
    24901 ctctttcgat aaaaagaccg gcacagctta cgcaaaaagc gcaggcaaaa ccatgatcag
    24961 taatgtgatt gcgactaacc acccgttttc aggcaatatt ccgtcgtagc gtggcgttcg
    25021 atccagcgga tcattttacc cgcgatgtcg ataccggttg ttttttctat tccttccagc
    25081 cctggcgacg cattcacttc catcaccaac ggcccgcgat tagcacgcag aatatccaca
    25141 ccagcaacgt ccagcgccat cgttcgcgcg gcttttatcg cgatttcacg ctcctgtggt
    25201 gtgatactgg cgacgcttgc cgcgccgcca cgatgcaaat tggaacgaaa atcgccctct
    25261 ttcgcccgcc gttcaatcgc agcgaccact tcatcgccaa caaccagaca gcggatatcg
    25321 cacccttgcg cctctttgat atattcctgc accagaatat gcgcgttcag accgcggaaa
    25381 gcgtcaatca cgctttccgc cgcctgacgc gtctccgcca gcacgacgcc aattccctgc
    25441 gtgccttcaa ccaacttgac caccagcggc gcaccaccga ccatgtcgat taaatcgctg
    25501 gtatcatccg gcgaatgcgc aatgcccgtg acaggcaggt cgatgccctg acgtgccagc
    25561 agttgcatgg aacgcaattt gtcacgcgcc cgggcaatgg cgaccgactc attgagcgga
    25621 tagctcccca gcatctcgaa ctggcgcagt gccgccgtcc cataaaaggt aatggcggtg
    25681 ccaatacgcg ggatcactgc gtcaaaatgg ggtaacttgc ggcctttgta gtgaatagaa
    25741 gacgccgcag gatttatgtt catgtagcaa gaaagcggat caagaatttc aaccaggtga
    25801 ccgcgctgta tagcggcttc acgcagccgc ttacacgaat agagcgttcc atcccgggac
    25861 aatatggcaa ttttcaccct gcacctctct gtcagaccta gtcaaaagcc cgcgtatcat
    25921 acatcgacgt ggcggtttta gcgcgtcgcc caaccctgtt tgtgcaaata atccagaata
    25981 aatgggcggc tttctttaat gattgttcgg cggatatgat cgctccaggt atcccggcga
    26041 ttattgctgc cacgggtgag gtaatattcc gccagttgct cgtcatactg cgccagtgcg
    26101 cctttatcca acggttgata gctgttttca tgcaccaaaa tggaggccgg taaacgcggc
    26161 ttaagatccg gattatccgc aggccagcca aggcacaacc caaacagcgg cagaacatgc
    26221 tgcggtaatt tcagcagttc cgtcaccgct tcaatattat tgcgcaggcc gccgatatat
    26281 accccgccca atcccagcga ttccgctgcg gttaacgcat tctgcgccat cattgctgta
    26341 tcaacgacac cgagcaacag ttgttccgcc aggccgagct gagcatccgg acagatctgt
    26401 aaatggcggt taaagtcggc acagaacacc cagaactccg ccgcttgcgc tacgtgtttt
    26461 tgcccgccgg tcagcgtcac cagttcttca cgtaacgctt tgtcggtaat gcgaataatg
    26521 ctactacatt gcaaaaaact ggaactggac gtcgcacggg cgctgttaat aatcgcctca
    26581 cgctgcgctt cggaaatggg ttcatcaatg aaatggcgaa tggagcgatg gccacaaata
    26641 agttcaatgg ttggggtcat tatctttttc tctttctgaa cgtgaatatt gcgttgggcg
    26701 gttcatcagc tgtggggcaa gacgttttgc cacctgaata ataaccacca ccgcagcggg
    26761 aagcatgagc aaaacaccga gaaaaatcat cagaatctgc acttctggcc gagaaaatgg
    26821 ctcaggcagc gacagggagt cgcttaccga cagcagcgcc accgccagca acatcattcc
    26881 gataaattcc agtatcaaca cgcttttagg caatttaccg atcgcgcgca tacgcttccc
    26941 tctgcaaagt gagccttcag tctaaaactt ttcactgtat tgtgtttaac agttatagct
    27001 tttagcaatt aatgcaacag gttaaaccta ctttcagcga atacatttta gcgtgatcat
    27061 tacaggcata aatctatgag gagagaaata atgcaaaccg ttatttttgg tcgtccgggt
    27121 tgcccttact gtgtgcgtgc aaaagatctg gctgagaaat tgagcaatga acgcgatgat
    27181 tttcagtatc agtatgtaga tattcgtgcg gaagggatca ctaaagaaga tctacaacaa
    27241 aaggcaggta aacccgtaga aaccgtgccg cagatttttg tcgatcagca acatatcggc
    27301 ggctataccg attttgctgc atgggtgaaa gaaaatctgg acgcctgatc gtctgacaag
    27361 ccctcgcgtt gagggcttta ctgatttttt ctgtgctgtg gtttaaacaa cctactgata
    27421 aataagaaac acagtgcccc cagcgcacac cagaacaccg cgcttagtaa ccatgccagc
    27481 tcttgccaga atgagcgggt cggtgaaaaa aacagccgca taataagcat tgaacagggt
    27541 gccgccagca ttgcgccaaa tagaggtttc aggacttctc tacgctgtga aaagaaactg
    27601 gcaactgctc caggaagaat gaaaaacagc aagccgattt caggatgccc ggcagcccga
    27661 aaagcgcctt tcatgtgcgt cgccagaaaa aggcacacca caatgaagag gacaaaacag
    27721 cagattgccc ccgcccaacg ttgtttatgt ttcactcgtt cctcctgaca ctgcgtctat
    27781 cgaacacatt tttcgccagt gtggcgttca gtaagataaa gccgcttcgc attccatgct
    27841 aatataggtc aacgcaattc atatagccgt tgatacctaa tgtgatt
//
LOCUS       DAJVTL010000053        27535 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.053, whole genome shotgun sequence.
ACCESSION   DAJVTL010000053 DAJVTL010000000
VERSION     DAJVTL010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27535
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.053"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..839)
                     /locus_tag="OQQ26_002107"
     CDS             complement(<1..839)
                     /locus_tag="OQQ26_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310435.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HCS1857561.1"
                     /translation="MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVV
                     DNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVS
                     VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNRLPQLQQIVGVDKL
                     APATSSLSLSQIIADNTPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASER
                     AYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQ
                     RCT"
     gene            complement(896..1189)
                     /locus_tag="OQQ26_002108"
     CDS             complement(896..1189)
                     /locus_tag="OQQ26_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HCS1857562.1"
                     /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAENPDINEFHKLMKA
                     CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG"
     gene            complement(1186..1668)
                     /locus_tag="OQQ26_002109"
                     /pseudo
     CDS             complement(1186..1668)
                     /locus_tag="OQQ26_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416214.1"
                     /note="FAD/NAD(P)-binding domain; possibly part of an
                     electron transfer system required for anaerobic carnitine
                     reduction; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
     gene            complement(1657..2118)
                     /locus_tag="OQQ26_002110"
                     /pseudo
     CDS             complement(1657..2118)
                     /locus_tag="OQQ26_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2264..3022)
                     /gene="aroD"
                     /locus_tag="OQQ26_002111"
     CDS             complement(2264..3022)
                     /gene="aroD"
                     /locus_tag="OQQ26_002111"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HCS1857563.1"
                     /translation="MKTVTVKDLVIGAGAPKIIVSLMAKDIARVKSEALAYREADFDI
                     LEWRVDHFADHSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
                     AAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
                     MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEV
                     FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
     gene            complement(3053..3851)
                     /gene="ydiB"
                     /locus_tag="OQQ26_002112"
                     /pseudo
     CDS             complement(3053..3851)
                     /gene="ydiB"
                     /locus_tag="OQQ26_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416207.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="quinate/shikimate dehydrogenase"
     gene            complement(3863..5128)
                     /locus_tag="OQQ26_002113"
     CDS             complement(3863..5128)
                     /locus_tag="OQQ26_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857564.1"
                     /translation="MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFS
                     TDNAGIAYLISGIGLGRLISILFFGVISDKLGRRAVILMAVIMYLLFFFGIPACPNLT
                     LAYGLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYML
                     LNNIWYGYGLIIPGILFVLITLMLLKSKFPNQLADASVANELPQMNSKPLVWLEGVSS
                     VLFGVAAFSTFYVIVVWMPKYAMAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKM
                     VRPIWANVFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFP
                     KSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRY
                     YRVFIIPENDVRFGERKFSTQLNTIKHRG"
     gene            complement(5355..6569)
                     /locus_tag="OQQ26_002114"
     CDS             complement(5355..6569)
                     /locus_tag="OQQ26_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857565.1"
                     /translation="MKNPYYPTALGLYFNYLVHGMGVIFMSLNMASLETLWQTNAAGV
                     SIVISSLGIGRLSVLLFAGLLSDRFGRRPFIMLGMCCYMAFFFGILQTNNIIIAYVFG
                     FLAGMANSFLDAGTYPSLMEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWF
                     GWSFMIAAGIMFINALFLYRCTFPPHPGRRLPVIKKTTSSTEHRCSIIDLASYTLYGY
                     ISMATFYLVSQWLAQYGQFVAGMSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTT
                     LLMLYTFISFIALFTVCLHPTFYVVIIFAFVIGFTSAGGAVQIGLTLMAERFPYAKGK
                     ATGIYYSAGSIATFTIPLITAHLSQRSIADIMWFDTAIAAIGFLLALFIGLRSRKKTR
                     HHSLKENVAPGG"
     gene            complement(6669..7025)
                     /locus_tag="OQQ26_002115"
     CDS             complement(6669..7025)
                     /locus_tag="OQQ26_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707588.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiL family protein"
                     /protein_id="HCS1857566.1"
                     /translation="MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIP
                     DCVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQQVYPDGNFIDWKIY
                     QSVAAELYAHDLERLC"
     gene            complement(7161..7268)
                     /gene="rprA"
                     /locus_tag="OQQ26_002116"
     ncRNA           complement(7161..7268)
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="OQQ26_002116"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            complement(7454..8566)
                     /gene="ydiK"
                     /locus_tag="OQQ26_002117"
     CDS             complement(7454..8566)
                     /gene="ydiK"
                     /locus_tag="OQQ26_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HCS1857567.1"
                     /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
                     VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPITLLVNSIVDGSGPLIKAISS
                     GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
                     GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
                     VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
                     WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
                     AVSWRLFATWVEEVPPPTDQPEEILEELGEIEKPNK"
     gene            8955..12011
                     /locus_tag="OQQ26_002118"
     CDS             8955..12011
                     /locus_tag="OQQ26_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HCS1857568.1"
                     /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKTNTTIGRIYNTVY
                     QRCRLQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
                     DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDKEMLGLNIVEFAGDDEALIDERVNALCVRLNELIASQQAGVIGWQVCREL
                     ASVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
                     GMFGHVDAGVLHVRPALDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
                     SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQLPI
                     AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTQ
                     CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
                     KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLEALNAEQKARTVLVVQDPFTS
                     YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
                     LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY
                     FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEVKNHKNSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
     gene            12008..12418
                     /gene="menI"
                     /locus_tag="OQQ26_002119"
     CDS             12008..12418
                     /gene="menI"
                     /locus_tag="OQQ26_002119"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HCS1857569.1"
                     /translation="MIWKRKITLEALNAMGEGNMVGLLDIRFEHIGDDTLEATMPVDS
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVC
                     KPLHLGSRHQVWQIEIFDEKGRMCCSSRLTTAIL"
     gene            12518..12706
                     /locus_tag="OQQ26_002120"
     CDS             12518..12706
                     /locus_tag="OQQ26_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiH family protein"
                     /protein_id="HCS1857570.1"
                     /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL
                     SSAELKEEIYFAWRLGVH"
     gene            13255..13623
                     /gene="sufA"
                     /locus_tag="OQQ26_002121"
     CDS             13255..13623
                     /gene="sufA"
                     /locus_tag="OQQ26_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HCS1857571.1"
                     /translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQLGMVGVRLG
                     VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQSMPFIDGTEVDFVREGLNQI
                     FKFHNPKAQNECGCGESFGV"
     gene            13632..15119
                     /gene="sufB"
                     /locus_tag="OQQ26_002122"
     CDS             13632..15119
                     /gene="sufB"
                     /locus_tag="OQQ26_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416198.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HCS1857572.1"
                     /translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR
                     AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT
                     CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
                     EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
                     MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN
                     AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
                     RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI
                     MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
                     RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
     gene            15129..15875
                     /gene="sufC"
                     /locus_tag="OQQ26_002123"
     CDS             15129..15875
                     /gene="sufC"
                     /locus_tag="OQQ26_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HCS1857573.1"
                     /translation="MLSIKDLHVSVEDKAILRGLSLDVRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
     gene            15850..17121
                     /gene="sufD"
                     /locus_tag="OQQ26_002124"
     CDS             15850..17121
                     /gene="sufD"
                     /locus_tag="OQQ26_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HCS1857574.1"
                     /translation="MAGLPNSSNALQQWHHLFEAEGVKRSSQAQQHLQQLLRTGLPTR
                     KHENWKYTPLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSDATE
                     GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQG
                     VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL
                     AFENPLSHHFAHNDLLLADDATAFSHSFLLGGAVLRHNTSTQLNGENSMLRINSLAMP
                     VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
                     LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
                     FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
     gene            17118..18338
                     /gene="sufS"
                     /locus_tag="OQQ26_002125"
     CDS             17118..18338
                     /gene="sufS"
                     /locus_tag="OQQ26_002125"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HCS1857575.1"
                     /translation="MTFSVDKVRADFPVLSREVNGLPQAYLDSAASAQKPSQVIDAEA
                     EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA
                     NSWGNSNVRVGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTL
                     FDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA
                     GTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD
                     RLVTGLQRIHRLLG"
     gene            18351..18767
                     /gene="sufE"
                     /locus_tag="OQQ26_002126"
     CDS             18351..18767
                     /gene="sufE"
                     /locus_tag="OQQ26_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HCS1857576.1"
                     /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRAEDRSP
                     QNSIQGCQSQVWIVIRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
     gene            18916..19920
                     /gene="ldtE"
                     /locus_tag="OQQ26_002127"
     CDS             18916..19920
                     /gene="ldtE"
                     /locus_tag="OQQ26_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
                     /protein_id="HCS1857577.1"
                     /translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV
                     QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL
                     AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
                     GIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
                     ALFSSVRTGTLVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQ
                     FKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ
                     "
     gene            complement(19984..20220)
                     /gene="lpp"
                     /locus_tag="OQQ26_002128"
     CDS             complement(19984..20220)
                     /gene="lpp"
                     /locus_tag="OQQ26_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein lipoprotein Lpp"
                     /protein_id="HCS1857578.1"
                     /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
     gene            complement(20531..21943)
                     /gene="pykF"
                     /locus_tag="OQQ26_002129"
     CDS             complement(20531..21943)
                     /gene="pykF"
                     /locus_tag="OQQ26_002129"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase PykF"
                     /protein_id="HCS1857579.1"
                     /translation="MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
                     SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PSVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
                     MVSGALVPSGTTNTASVHVL"
     gene            22500..22709
                     /gene="fumD"
                     /locus_tag="OQQ26_002130"
     CDS             22500..22709
                     /gene="fumD"
                     /locus_tag="OQQ26_002130"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HCS1857580.1"
                     /translation="MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTV
                     LANKRIQRSELEKQAMETVINALVK"
     gene            23165..23791
                     /locus_tag="OQQ26_002131"
     CDS             23165..23791
                     /locus_tag="OQQ26_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like protein"
                     /protein_id="HCS1857581.1"
                     /translation="MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQE
                     DIDSGTIGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFG
                     DNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCS
                     ACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV"
     gene            23812..25914
                     /locus_tag="OQQ26_002132"
     CDS             23812..25914
                     /locus_tag="OQQ26_002132"
                     /EC_number="1.2.7.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase"
                     /protein_id="HCS1857582.1"
                     /translation="MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDE
                     VPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQ
                     MKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV
                     AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKR
                     LNDYMMIELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPP
                     GNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGN
                     TCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
                     KGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWN
                     LGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPL
                     KLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTV
                     SPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRN
                     EHDLICSWVFDKNPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQR
                     LGLEDIAADLAAHNLLPV"
     gene            25927..26565
                     /locus_tag="OQQ26_002133"
     CDS             25927..26565
                     /locus_tag="OQQ26_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707570.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhW family putative oxidoreductase system
                     protein"
                     /protein_id="HCS1857583.1"
                     /translation="MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAE
                     FIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYS
                     TQAMSENYAAMSLQVVEQDICRTIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEA
                     AIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP"
     gene            26629..27297
                     /locus_tag="OQQ26_002134"
     CDS             26629..27297
                     /locus_tag="OQQ26_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416186.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HCS1857584.1"
                     /translation="MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDES
                     RCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCID
                     VCPTGASWRDEQGSVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLA
                     KGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIK
                     KENV"
     gene            27294..>27535
                     /locus_tag="OQQ26_002135"
     CDS             27294..>27535
                     /locus_tag="OQQ26_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase cytochrome B subunit"
                     /protein_id="HCS1857585.1"
                     /translation="MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVL
                     GLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNA"
BASE COUNT         7192 a         6506 c         7059 g         6778 t
ORIGIN      
        1 caggtgcaac gctgctgctc aagcagcgcg agacacgcat caggagtgaa aatatctaac
       61 aacacgctgc gagcgccaat taagaatggt gccgttacgc catgcagaaa gcccgttgcg
      121 tggccgagtg gcgcaggcat cataaagaca tcctgccagg tcagattcag ccgcgcgcaa
      181 taagcccgct cactggcgag aatattgtta tgcgtaagca tcacgccctt tggcagaccc
      241 tcggttccgg aggtaaacag caccgcagct aattcatcgc cgtgggtcgt tatcgccgtg
      301 gtcagtgggg tattgtcggc gataatctga cttaatgaga gggaagaggt ggcgggagcc
      361 agtttgtcta cgccgacaat ttgttgtagt tgtggaagcc gattttgcag cggcaggatt
      421 aaatctaccg gacgcgtttg tttaaacaac gtcggtgcaa agaacatttt tgcctgacac
      481 ttattgagca cccataccag ttctgcttcc cgccaggaag gcaacagcgg tacggaaacc
      541 gcaccgattt tcaggcaggc aagatagata acggtaaatt cacaccagcc tggcagttga
      601 aatgcgatac gatcgcctga ttcaataccc ttcgctaaca tccagtttgc cagacagctc
      661 gcggcgtgat cgagcgcgct ataggtgtac gatgctccat gattatcgac cacggcaatt
      721 ttgtctggca tcgcacgagc ggtctgctgc cagtaatcgg ccagcgaagc atcgccccat
      781 agcccttgct gacgatacgc cgcacgacgt tgttcgttga acgttaatgt cactttcatg
      841 ttggactctc gaaacagaac atcaggcccg agatgcgggc ctgtgggatg catgattagc
      901 cgtagcgaaa atcaataccg aaggtgcctg cgggatattg ccactgttcg agaatagtgt
      961 taccgcacag cacccgacag gtgccgcact ccagacaacc ggcggaatca aaatgaatgt
     1021 ttcctgcgtc atcctgctta taaagtccgg cagggcaggc tttcattaat ttatggaatt
     1081 cattgatatc gggattttcc gccagaatga tatgcgggtg tccctcatca acatggaatt
     1141 tattgacgcc taatttgatg tcgacgttaa ccgtagcgtt ctggctcata gcgcggttgc
     1201 tcccttaatg ccatctttca gcaagttgat cagcccaatt ttcttcgcat gtcccatgat
     1261 cattttgcgt accggttggt taggcttacc gtcgatagtg aacatctcgt tcatgatgtc
     1321 ggctaccatt cgtgggtatt ggctaaacag gcgcggattt tccatcagcg ccgggatctt
     1381 gcgaaaatgc tgcatatcgc gcataacaca actttgttcc agctcacgtt tgtattgcgc
     1441 aagactgctg gcggagaaat ccgcgcgttc tttggcggcg atcaccgttg tggcggcagc
     1501 ctgagccgat gcaatggcta aatccatgcc gcggaccgta aaacccaaat tcaggcagaa
     1561 gcctgcggcg tcaccaacga tcatcacgcc ctcattaacc agttgcggca ccattgccaa
     1621 accgccttcc ggcaccatat gcgcggaata ttcaagcagt ttgccgcctt gctggcgtgg
     1681 atcgacaaat gtcccgatgc caatatcact aataatacca ggctggtggg ctgcggcggc
     1741 gcgtaaggtt tgtgtaagta caccttgtgg atagttataa gcaataattt tattttgttc
     1801 tgcgagatca gaaatacgcg gcgattgtcc ccagtgaccg cataatgccc atttcaccag
     1861 accttcttgc gccagcggac taataccgcg gtcggcgcga tcgccaagcc ctgttggact
     1921 aataatcgat aaattacgtg gcgtttgagt ctgtttatat ttatcagcaa gagcagtaat
     1981 taacgtggtg gcttccagaa taccgccgcc agcgcctaac acacaaagtg ttgcttcgtc
     2041 gggaatataa ttcaccgctt cctgtgccga caggaccggc actcgtccat taatacgagg
     2101 tggttttaca ggtttcattg ttaattcctg attcaggtgt gattttccct acgccagatg
     2161 gagaattagc gcacagagac tcacgaaata tttttataaa atacggttaa aaatactttt
     2221 tttatttcgg cgggggaggg tatttctgcc gaaatattat tgcttatgcc tgatgtaaaa
     2281 tagttaatac cgtgcgcaaa tcatttaccg agatttgccc tggtgcagag gcttttttta
     2341 ccgcaccaaa agttgccgcc gacccaaata cttcaccagc cagacgagaa attacgccag
     2401 tttttgccat cgacatcgtg atgattggac gatcggcata ctgctcctgc atctccaggg
     2461 tcgcggcaag caacgtcagc acatcgctgg tactttgcgg catcagcgca atcttaggaa
     2521 tatcggcgtc gaaggactgc attttgcgca gacgggcaat gatttcttcg gcttccggcg
     2581 ttttatggaa gtcatggttg gacatgacaa ctttcacatc atgcgcgtgg gcgtaggcga
     2641 cggtttcttt aacctgatca tcgccggtaa ataactccag atcgatcata tcaaccaggc
     2701 cgctgtcgat ggctgcacga ttgagagcaa tataagcctc ggtggaaatc gcctgctcgc
     2761 cgccttcttt ggcactgcgg aaggtaaaca gcagcggttt ttctggcatg gtttcacgga
     2821 gaatttttgc cgccgccatg acagactcca cattggagtg gtcggcaaag tggtccacac
     2881 gccattccag aatatcaaag tccgcttcac gataggcgag agcttcggat ttcacgcggg
     2941 cgatatcttt cgccatcagc gagacgatga ttttaggtgc gcccgcacca atgacgagat
     3001 cttttacagt tacggttttc attttttacc ctttctgcac gcggtcagcc tgtcaggcac
     3061 cgaaccccat gacctgttta acatattcca gagggaaatc tttgccagtc cataacgtga
     3121 actgttcagc cccttgccac aacaacatgc cgtatccatc aatcgttttg caaccagctt
     3181 gttgcgcctg ctgcaataac ttcgtcatat gcgggttata cacgcattca gtgaccaaaa
     3241 gtcccggatg taacagattg atatcattaa ccaatgattc attctcaagg ggtttcatac
     3301 ccacttttgt gccattggtt aaaatgtcgg cggaagccag ggcttcagca aaggcttgct
     3361 gatcggcgag atcggtaacc gtgacgacac aatcggtgtt ttcgttaacc cgctgcgcga
     3421 aagcgagggc tttatcgaag aactcatccc gacggttaaa gagtttaatt tcttttaaac
     3481 cttcaattgc cccctgcgcg ccaatcgccg ttgaggcacc accggcccct aacagcacca
     3541 tcgttttgcc tttggtatca aaaccgctct ctttaatggc gcgaatatgg cccgtgccgt
     3601 cggtgttata gccacgcaga tagccatcat cattaacgat ggtgttgatg gcacccacca
     3661 gttccgcgca ttttgagggc ttttaatcct tcaattgctc cgggaaaact atcgttatcc
     3721 acttcgaagg ccatataggt aaatggcaat cccgcttttt ctaaggcttt attctgcatt
     3781 tcgggcgata aactgtggcg gatgggatag gccatcagcc caattaattc gtattttgcg
     3841 gtaacatcca taattaactc ctttaacctc tatgcttaat tgtgtttaac tgggtgctaa
     3901 atttacgctc gccaaaccgc acatcatttt caggaataat gaaaacgcgg taatagcgga
     3961 taaagacaat aattgcggta atcagggcca gcagcgcgaa agtaaaatcg agaacaatga
     4021 tatattgcag accgatgttc gacagataac cggtaatcag cggaataaca aaattagcca
     4081 atccacccat catcatataa atactggtga ctttggcttt gcttttgggg aaaaactctg
     4141 acatgaccga aacgccgagc tgtaaaatgc cgccagctgc tgagaaaccg ataacaaagg
     4201 cgccggcatt acacaccagt ggagaagggt acaggtagat aatggctgct gttattgttg
     4261 ccagtgcaga gttaaataca ttagcccaga tgggccggac catttttttc agtagtgcgg
     4321 caaaaataaa gacacagacc aacgagccca tactgtaata agagatggtt tttaatgcct
     4381 cagcttctga cataccagca aaagccatcg catatttggg catccacacc acaatcacat
     4441 aaaaggtcga gaatgcggct acaccgaaca gtaccgatga aacaccttcc agccagacta
     4501 acggtttgct gttcatttgc ggtaattcat tagctacact ggcgtccgcc aactggttgg
     4561 ggaatttgct tttcaatagc atcagcgtga tcagtacaaa cagaataccc ggaataatca
     4621 gcccatagcc gtaccagata ttattgagca acatatagct caccagcatt gggtagaaca
     4681 tttgcccgaa tgacaccatc gctttaacca gtatgaccgc cgaaccagag gctttcggaa
     4741 agcattccat gagcgcgggg tagccacccg tatccagcgc tgagttagcg atacctacgc
     4801 acactgccag accgtaggcg agagttaaat tcgggcaagc gggaatacca aagaagaata
     4861 gcagatacat tattactgcc attaatatca ccgcccgacg accaagctta tcggagatca
     4921 caccgaagaa taaaatactg atcaatcgcc ccaaaccgat accggaaatt aagtaggcaa
     4981 tgcccgcgtt gtcagtggaa aacttttctg ccagagatga catattttgg gcaagcgtaa
     5041 taacactaat gccgtgcagg aagtagctga agtaaataca aagaacagcc aagataaatg
     5101 gcgtgctgaa agccttattt tgagacattt tcacagctcc ttgctgaaag ataatttcgt
     5161 taccgtacgt attgttctcc gacggtttac ataattacta tactgaagat gattttccct
     5221 gggtacatgg cataaagttt atatttctag gaatattgca tgtcatagtt tgtttttgat
     5281 cgcgattttc cttagttagc gcagaaagag ttatttatcc gtaagatctt gcatgaccta
     5341 aaaagaatat tgcattaccc acccggagcg acattttcct ttagcgagtg atgccgcgtt
     5401 tttttgcggc tgcgtaagcc gataaacagt gccagtaaaa aaccgatggc agcgatggcg
     5461 gtatcgaacc acataatatc ggcaatactt ctttgggaca gatgagccgt aatcaacgga
     5521 atagtaaatg tcgcaatact gcccgcactg taatagatcc ctgtagcttt acctttagcg
     5581 taagggaaac gttcagccat taacgtcagg ccaatttgca cagcacctcc agcagaggta
     5641 aaaccaatga caaaagcaaa tattatcacc acataaaatg tgggatgcag gcagacggta
     5701 aacagagcaa taaatgagat aaaggtgtac agcatcagta atgttgttgg gcgaacggta
     5761 ttacgaatga gtggagcggt aataaataca caaagcagcg aacccacggt gtagatactg
     5821 agtagtttga tcgacatagt gtatgacatg cctgcaacaa attgtccgta ctgtgccagc
     5881 cactggctaa ccagataaaa cgttgccatt gagatatagc catataaggt ataactggct
     5941 aaatcgataa ttgaacagcg atgttccgta gagctggtgg ttttctttat gacaggtaag
     6001 cgacgacccg gatggggtgg gaacgtacaa cggtataaaa acagagcgtt aataaacata
     6061 atgcctgcag caatcataaa ggaccaaccg aaccacagtt cagcccacac taacaggcta
     6121 atgattagcg gtaataaaaa ttgtccgctg gaaacaaatg ctttaattaa aatattggct
     6181 gtcccaggtg agcgtggaaa agcttccatc aaactgggat aagtgcctgc atcgagaaaa
     6241 ctgtttgcca ttcccgccag aaagccaaaa acataagcga taatgatgtt attggtctgc
     6301 aggatgccaa aaaagaaggc catatagcag cacatcccga gcatgataaa agggcggcga
     6361 ccaaagcgat cggataataa tcctgcaaaa agcaacacac ttaatcgacc aatgcccagc
     6421 gatgagataa ctatcgagac acccgcggca ttagtctgcc aaagtgtctc cagcgaggcc
     6481 atattcaggc tcataaaaat gacgcccata ccatgcacca ggtaattaaa atacaaccca
     6541 agtgcggtag ggtaataggg atttttcata ggttctactt agcaaaggtg ctttaaaaag
     6601 tgtagcgatg ttgtgtcagt atccattcat tattgttgta acagcgacaa ttcctttctg
     6661 tggaaaaatt aacaaagccg ctccagatcg tgtgcatata attcagcggc taccgattga
     6721 tagatcttcc agtcaataaa attgccatca gggtagactt gttgaaacgc ggttaagtcg
     6781 gggaaaaaac gcatggtgtt gttgccgatg cggttattta ttttctctat gatggcatga
     6841 agatgttttt ttcgttgctg acgcatagcc aacagttgct cgactacaca atcaggaatg
     6901 gcgcatttgc cattttccca ctgacgccag ctttcactgt caccggtctg ggcaatccag
     6961 gtcgcgcatt catcaatagt catggcaaaa atatggcgga gtgcctggag ttcataagcg
     7021 ttcatcgtgt aatggctgca tgaaataaac aataaaatat aaataacatt atcagcctgc
     7081 tgacggcttg aagagagtca cagtatcttg tgcaacatta ttggaaagag tgaggggcga
     7141 ggtagcgaag cggaaaaatg ttaaaaaaaa gcccatcgtg ggagatgggc aaagactaca
     7201 cacagcaatt cgttgtttca ctcaggggat ttccatgctt ataaatcaat atgttgattt
     7261 ataaccgtga gctaatagta ggcatacgga ctttttgcgt cgatcagatt cgtctcatta
     7321 gtttaaaaac tgtaaagaat ttgcgacagg tactaccagc tgaatggcgg taagcaggaa
     7381 aatatgggga agagcaagca aatatcaatt agcggtggtt aacaatcagg cggcagagcc
     7441 gcctgatgag aaattactta ttcggtttct cgatttcgcc aagttcttcg agaatttctt
     7501 ccggttggtc cgtcggcggc gggacttctt ccacccacgt ggcaaacaga cgccaggaaa
     7561 cggctaacag aaccggacca ataaacagac cgatcatccc gaaagcaatc aaaccaccaa
     7621 taacgccaga gaggatcagg atcagcggta aatcggcacc catgcgaatt aacattgggc
     7681 ggatgacgtt atccagcgtg ccaaccacac cgctccacac taacaatacc gttccccagg
     7741 tggtatcgcc agtccagtag agccagataa tcgccggaat cagtaccggc aacgggccaa
     7801 gctggacaag gcaggagagg atcattaaca ccgttagcaa cgttgcataa ggtacgccgg
     7861 atacggcgag gccgataccg ccaagcactg cctgtactaa cgccgtcacc accacaccca
     7921 gcgccaccgc gcggatagcc tgtgccgcca gcagcacggc ggcatctccg cgaacgcctg
     7981 ccagacgggt tgcaaaatgg cgaatgcctt gtgccacctg ttcaccgcgc cagtacagca
     8041 gggcactgaa gagaagcatc agcgcacaat gcaccataaa gcgcccgata tgcgccgcct
     8101 gcccaacgaa ccaggtggtg gtggtgccaa tataagggcg gactttcgcc atgatcgccg
     8161 taccccccat atccagcaag ttgtgccagc ctgcatacag cttcgcgcca atcaccggaa
     8221 tggtattaag ccacgccaga tcgggtaacg tcatgtcgcc gctggaaatg gctttaatta
     8281 gcgggccgct gccgtcgacg atactgttaa ccagcaaagt gatagggatg ataaacacca
     8341 tcactaataa cagcgtcatc accagaacgg cgagagagcg gcggccaaac atgatctttt
     8401 gcaaacgtaa caataccggc caggtggcga taaccaccgt accggcccat gcaaagccga
     8461 gaataaaggg ttgaacaatc cacagacatg ccacaatcat gatggctaaa aacagcaccg
     8521 aaagcagaat ttgtgcgaca tccctgggct gacgaacatt taccataact acttttcacc
     8581 ttttttgtgc gtcaaatcgt cgacgcgacg tgaacacgcg aaactcacct gcataatgat
     8641 gagcaatttc agcggttttt aacaggccga ttctgccctt aattctgatg ggcgtgttag
     8701 aaaaaaatgt ggtacaacaa ctcaggcaac acgcaaacga tttactcgtc gtatttcaag
     8761 ttgcatatgc tgcggctacg ttcgttcacc ccagtcactt actattttaa gctcctggag
     8821 ttcactcgct tgccgccttc ctgcaactcg aaatccatag agtaaataaa catcaccttt
     8881 cagtgcgcta ttgcagccgc ctgaaagaat agtgtatcga cctacataac agaccgcagg
     8941 aaagggtcaa tataatgatt ccacagattt cccaggcacc cggcgtcgtt caactggtgc
     9001 ttaatttttt gcaagagctg gagcaacaag gttttaccgg cgatacggcg acaagttatg
     9061 ccgatcgtct gacaatgtcg accgacaaca gtatttacca acttctcccc gatgcggtgg
     9121 tatttccgcg ttcaaccgca gatgtggcgc tgatcgcccg tcttgccgcg caggaacgct
     9181 attcatcgct gatctttacc ccccgcggcg gcggcaccgg cactaacggt caggcgctca
     9241 accaggggat tattgttgat atgtcccgcc atatgaaccg catcatcgaa attaaccctg
     9301 aagagggctg ggtgcgcgtt gaggccgggg tgataaaaga ccaactcaat cagtacctga
     9361 aaccgttcgg ctactttttt gcgccggaac tttcgaccag caaccgggca acgctcggcg
     9421 ggatgatcaa taccgatgca tccggtcagg gatcgctggt ctatggcaaa acgtcagatc
     9481 acgtacttgg cgtacgcgcg gtgttgttgg ggggcgatat tctcgatacg caacctttac
     9541 ccgtcgaact ggcggaaacg ctgggtaaaa ccaataccac aatcgggcga atttataaca
     9601 cggtttatca acgttgccgt ctgcaacgcc agttaatcat cgacaacttc cccaaactta
     9661 accgctttct taccggttac gatctgcgtc atgtctttaa cgatgagatg accgagttcg
     9721 acctgacgcg cattctgacg ggttcagaag ggacgttggc ctttattacc gaagcgcggc
     9781 tggatattac gcgcttacct aaagtgcgcc gtctggtgaa cgtcaaatat gactcttttg
     9841 actccgcgct gcgtaacgcg ccgtttatgg ttgaggcgcg ggcgctttcg gtagagacgg
     9901 tggactcaaa agtgctgaat ctggcgcggg aagatattgt ctggcattcc gtcagcgagt
     9961 tgattaccga tgtgcctgac aaagagatgc tcgggctgaa cattgtggaa tttgctggtg
    10021 atgatgaggc gctgattgac gagcgagtta atgcactctg tgtgcggctt aatgagctga
    10081 ttgccagcca acaggccggt gtgattggct ggcaggtgtg ccgtgagttg gcgagcgttg
    10141 aacgtatcta tgcgatgcgt aaaaaagccg ttggtctgct tggcaatgcc aaaggtgccg
    10201 ctaagccaat tccgtttgct gaggatacct gcgtaccgcc ggaacatctg gccgattata
    10261 ttgctgaatt tcgcgcgctg ctcgacagcc acggcttaag ctacggtatg ttcggtcacg
    10321 tcgacgcagg tgtcttgcac gtccgtccgg cactggatat gtgcgatccg caacaagaga
    10381 ttttgatgaa gcaaatctct gatgacgtgg tggcgctgac tgcgaaatac ggtggtttgt
    10441 tgtggggcga gcacggcaaa ggttttcgcg ctgaatacag cccggcgttt ttcggggagg
    10501 aactttttgc agaactgcgc aaagtgaaag cggcatttga cccgcataac cgactcaacc
    10561 cagggaagat ttgcccgcca gaaggtctcg atgcgccgat gatgaaagtg gacgcggtga
    10621 agcgcggtac attcgatcgg cagctcccca ttgcggtacg ccagcagtgg cgcggtgcga
    10681 tggagtgtaa cggcaacggt ttatgcttca actttgatgc ccgtagtccg atgtgtccgt
    10741 cgatgaagat cacccagaac cggattcatt caccgaaagg gcgcgcaacg ctggtgcgtg
    10801 aatggctgcg tttgttggcg gatcgcggcg ttgatccact caaactggaa caagaactgc
    10861 ctgaatccgg cgtcagttta cggacgttaa ttgcccgcac gcgcaatagc tggcatgcga
    10921 ataaaggcga atatgacttc tcacacgaag tcaaagaggc gatgtcgggc tgtctggcct
    10981 gtaaagcgtg ttcgacccag tgcccgatca aaattgatgt gccggagttt cgctctcgtt
    11041 tcctgcaact ctatcacacc cgttatttac gcccgctgcg cgaccacctc gtcgctacgg
    11101 tcgagagcta cgcaccgctg atggcacgcg cgccgaaaac ctttaacttc ttcattaacc
    11161 agccgctggt gcgcaaactc tcggaaaaac atatcggcat ggttgatttg ccgctgcttt
    11221 cggtcccctc gctgcaacaa caaatggtgg ggcatcgctc ggcaaacatg acgctggaac
    11281 agcttgaagc tctcaatgca gagcagaaag cgcgcacggt gttggtggtg caggacccct
    11341 ttaccagcta ttacgatgcg caagtggtgg cggattttgt ccgtctggtc gaaaaattag
    11401 gtttccagcc tgtgttactg ccattttcgc ccaatggcaa agcccagcat atcaaaggct
    11461 ttctgaatcg ttttgcgaag acggcgaaaa agacggcgga tttcctcaac cgtatggcga
    11521 agctgggtat gccaatggta ggcgtcgatc cggcgctggt actttgttat cgcgatgaat
    11581 ataaactggc gctgggcgag gaacgtggcg agtttaacgt cttactggcg aatgaatggc
    11641 tggcaagcgc acttgagtca cagccagtgg ctacagtcag cggtgaatca tggtatttct
    11701 ttggtcactg taccgaggtt accgccttgc cgggtgcgcc agcacaatgg gccgcgatat
    11761 ttgcccgttt tggcgcgaaa ctggaaaatg tcagcgtggg ttgctgcggc atggcaggga
    11821 cttacggaca tgaagtgaaa aaccataaaa attcgctcgg gatctatgag ttatcctggc
    11881 atcaggctat gcagcgactg ccgcgtaacc gctgtctggc gaccggatat tcctgccgta
    11941 gtcaggtcaa acgggttgaa ggcacggggg tacgccatcc tgtgcaggct ttactggaga
    12001 ttattaaatg atatggaaac gaaaaatcac cctggaagca ctgaatgcta tgggtgaagg
    12061 aaacatggtg gggttgctgg atattcgctt tgaacatatt ggtgatgaca cccttgaagc
    12121 gacaatgcca gtagactcgc ggacaaagca gcctttcggg ttgctgcatg gaggagcatc
    12181 cgtggtactg gccgaaagta tcggttccgt tgccggttat ttatgtaccg aaggtgagca
    12241 aaaagtggtt ggtctggaaa tcaatgctaa ccacgtccgc tcggcacgag aagggcgggt
    12301 gcgcggcgta tgcaaaccgt tgcatctcgg ttcgcgtcac caggtctggc agattgaaat
    12361 cttcgatgag aaagggcgta tgtgctgttc gtcacgattg acgaccgcca ttttgtgacg
    12421 ttgtcaccag aaaagtgtga cgcatattgc ttttggtcat tatctgcaca gtaaacggtg
    12481 gtatactgtg caggtcttgt ctaaaagcga ggatgctatg tctactcaac ttgatcccac
    12541 ccagctggcc attgaatttt tacgccgtga ccagagcaat ctttcacctg cccaatatct
    12601 caaacgtctg aaacaactag aacttgaatt tgctgacctg cttactctct cttctgctga
    12661 attaaaagaa gaaatctact ttgcctggcg tctgggcgtg cattgatcct gacttaatgc
    12721 cgcaagttcg ccaaatcgac ctggattaac ctccgtccag gttcgatgac cttcttaata
    12781 ctgcttatct acccgcctga tattgttcaa aaataatact aatcgcagtt tgtgttaaaa
    12841 cggcgggtta gctttatgag attattctta tcgccccttc aagagctaag ccactgagag
    12901 tgccggagat aagcgccgga tggggtagaa acccttaagc ctgtgtcgca cagacttaag
    12961 ggttttctta tttctgaacg ctgcactttt ttacctatct cttaaatagt cattttcaat
    13021 acaacttttt ctttttcatc acagccttaa tgctccttag ataataacca ttatctaaca
    13081 atgagatacc taattcttag cgtgcctgtt aacccacaca tcagggtcta tgcttattaa
    13141 aagcaggcaa aaagcatgtt ttacggtaaa gcccctgcgt ttgctggctt gaactgataa
    13201 tcattatcac taacatgctg ttatacgctg aaagcgatga agtgaggtaa atagatggac
    13261 atgcattcag gaacctttaa cccacaggat ttcgcctggc aaggcttaac gctgacaccc
    13321 gcagcggcga tacacatccg cgagctggtg gcaaagcagc taggtatggt cggcgtgcgc
    13381 ttaggtgtga agcaaacggg ctgcgcgggc tttggctatg tgctcgacag tgttagcgag
    13441 ccggacaaag acgatctgct gtttgaacac gacggcgcga agctgtttgt cccgctgcaa
    13501 tcgatgccgt ttattgatgg cacggaagtc gatttcgttc gtgaaggact taatcagata
    13561 ttcaaatttc acaaccctaa agcccagaat gaatgtggct gtggcgaaag ctttggggta
    13621 taggcggtac tatgtctcgt aatactgaag caactgacga tgtcaaaacc tggaccggcg
    13681 gcccgctgaa ttataaagaa ggattcttca cccagttagc caccgatgag ctggcaaagg
    13741 ggataaacga agaggtggtg cgcgcaattt cggcgaagcg taatgagccg gagtggatgc
    13801 tggagtttcg tctaaacgcc tatcgcgcat ggctggagat ggaagaaccg cactggttga
    13861 aagcgcacta cgacaagctg aattatcagg attacagcta ctactcagca ccatcgtgcg
    13921 gtaattgtga cgacacttgc gcgtctgaac ctggcgcggt gcagcaaact ggcgcgaacg
    13981 cctttttaag taaagaggtg gaggcggcgt ttgagcagtt gggcgttccc gtgcgggaag
    14041 gcaaagaggt ggcggtggat gccattttcg actctgtttc ggttgccacc acttatcgcg
    14101 aaaaactggc ggagcaggga attattttct gttcctttgg tgaggcgatc cacgatcacc
    14161 cggaactggt gcgtaaatat ctcggcaccg tggtgccggg gaatgacaac ttctttgcag
    14221 cacttaatgc ggcggtagcc tctgacggta cgtttattta tgtgcctaaa ggcgtgcgct
    14281 gcccgatgga actttccacc tattttcgca ttaacgcgga aaaaaccggg cagtttgagc
    14341 gcacaattct ggtggccgac gaagacagct acgtcagcta cattgaaggc tgttccgctc
    14401 cggtgcgtga cagctatcag ttgcacgcgg cagtggtgga agtcatcatc cataaaaacg
    14461 ccgaggtgaa atattccacg gtacaaaact ggttccctgg cgataacaac accggcggta
    14521 ttctcaactt cgtcaccaag cgtgctttgt gcgaaggcga aaacagcaaa atgtcatgga
    14581 cgcaatcaga aaccgggtca gcgattacgt ggaaatatcc cagctgcatt ttgcgcggcg
    14641 ataactccat tggtgagttt tactcagtgg cgctgaccag cggtcatcag caagcggata
    14701 ccggcaccaa gatgatccac atcggtaaaa acaccaaatc gaccattatc tcgaaaggga
    14761 tctctgccgg acatagtcag aacagttatc gcggcttagt gaaaatcatg ccgacggcaa
    14821 ccaatgcgcg caatttcact cagtgcgact caatgctgat tggcgctaat tgtggggcgc
    14881 ataccttccc gtatgtcgaa tgtcgcaata acagcgcaca actggagcac gaggcaacga
    14941 catcacgtat tggtgaagat caactgtttt actgcctgca acgcgggatc agcgaagaag
    15001 acgccatctc gatgattgtt aacggtttct gcaaagacgt gttctcagaa ctgccgctgg
    15061 aatttgccgt tgaagcacaa aaactcctcg ccatcagtct tgaacacagc gtcggataag
    15121 gaataaacat gttaagtatt aaagatttac acgtcagcgt ggaagataaa gctatcctgc
    15181 gtggattaag cctcgacgtt cgtcccggcg aagttcacgc cattatgggg ccaaacggtt
    15241 cgggcaaaag taccttatcg gcaacgcttg ccgggcgcga agattatgaa gtgacgggcg
    15301 gcacggttga gttcaaaggc aaagatttgc ttgcactgtc gccggaagat cgtgcaggcg
    15361 aaggcatctt tatggccttc cagtatccgg tggagattcc cggcgtcagt aaccagtttt
    15421 tcctgcaaac ggcacttaat gcagtgcgca gctatcgagg ccaggaaacg ctcgaccgct
    15481 ttgattttca ggatttgatg gaagagaaaa tcgctctcct gaagatgccg gaagatttat
    15541 taacccgttc ggtaaacgtt ggtttttccg gcggcgagaa aaagcgcaac gatattttgc
    15601 aaatggcggt gctggaaccg gagttatgca ttcttgatga gtcggactcc gggctggata
    15661 ttgacgcatt aaaagtggtt gccgatggcg tgaactcgct gcgtgacggc aagcgctcat
    15721 tcatcattgt tacgcactac caacgcattc tcgactacat caagcctgat tacgtccatg
    15781 tgctatatca gggacgaatt gtgaaatccg gcgatttcac gttggtcaaa caactggagg
    15841 agcagggtta tggctggctt accgaacagc agtaacgcac tgcaacagtg gcatcatttg
    15901 tttgaagctg aaggagtgaa acgttcctcg caagcacaac agcatttaca acaattgctg
    15961 cgtaccggac tgccgacacg taaacatgaa aactggaaat atacgccgct ggaagggctg
    16021 accaatagcc agtttgtcag cattgcgggg gagatatccc cacagcagcg tgatgcctta
    16081 gcgttaacgt tagacgccgt gcggctggtg tttgtcgatg gacgttacgt gcctgcgctg
    16141 agcgatgcaa ctgaaggcag cggatatgaa gtgagcatta acgacgaccg tcaggggtta
    16201 cccgacgcta ttcaggcgga agtgtttctg catttgacgg aaagcctggc acaaagcgtg
    16261 acgcatatcg ccgtgaagcg cggtcaacgg ccggcaaagc cattgctgtt aatgcatatc
    16321 acccagggcg tggcaggtga agaggtgaac actgcccatt accgacatca tctggatctg
    16381 gcggaaggtg ccgaagcaac ggtgatcgaa cattttgtca gcctgaatga tgctcgtcat
    16441 tttaccgggg cacggttcac tatcaacgtc gcagcgaatg cccacttgca gcatatcaag
    16501 ctggcgtttg aaaacccgct cagtcaccac tttgcccata acgatttgtt gctggctgac
    16561 gatgccaccg catttagcca cagtttcctg ctgggtggcg cagtgttacg acacaacacc
    16621 agtacgcaac tcaatggcga aaacagcatg ttgcggatca atagcctggc gatgccggtg
    16681 aaaaacgagg tgtgtgatac ccgtacctgg ctggaacaca ataaaggttt ttgtaacagc
    16741 cgacagttgc acaaaactat cgtcagcgac aaaggccgcg cggtatttaa cggtttgatc
    16801 aacgtcgcgc agcacgccat caaaacggat ggtcagatga ccaacaataa tctgctgatg
    16861 ggcaaactgg cggaagtgga tacgaaaccg cagctggaaa tctatgcaga tgatgtgaaa
    16921 tgcagccacg gcgcgacggt ggggcgtatt gatgatgaac agatgttcta tctgcgctcg
    16981 cgcgggatca atcagcagga tgcccagcag atgatcattt acgcctttgc tgccgaactg
    17041 acggaagcac tgcgtgatga ggggcttaaa cagcaggtgc tggcccgaat cggtcaacgg
    17101 ctgccaggag gtgcaagatg actttttccg tcgacaaagt gcgggccgac tttccggtgc
    17161 tttctcgtga ggtgaacggt ttgccgcagg cttatctcga cagcgccgcc agtgcgcaga
    17221 aaccaagcca ggtgattgac gccgaggctg agttttatcg tcacggctac gcggcggtgc
    17281 atcgcggtat tcatacctta agcgcccagg cgaccgagaa aatggagaat gtgcgcaagc
    17341 gggcatcgct gtttattaat gcccgttcgg cggaagagct ggtgttcgtc cgcggcacga
    17401 cggaagggat caatctggtc gccaatagct ggggcaacag caacgtgcgg gtgggcgata
    17461 acatcatcat aagtcagatg gaacaccacg ctaacattgt tccctggcag atgctttgcg
    17521 cacgtgttgg cgcagagctg cgtgtgatcc cgctcaaccc cgacggtacg ctgcaactgg
    17581 agacgctgcc tacgctgttt gatgagaaaa ctcgcctgct ggcaattact catgtctcca
    17641 acgtgcttgg cacagaaaat ccactggcgg aaatgatcac gcttgcgcac cagcatggcg
    17701 caaaagtgct ggtggatggc gctcaggcgg tgatgcatca tccggtggat gttcaggcgc
    17761 tggattgcga tttttacgtg ttttccgggc ataaactgta tggccccacc gggattggca
    17821 ttctttatgt caaagaagcc ttgttgcagg agatgccgcc gtgggaaggg ggcggttcta
    17881 tgatcgccac cgtcagcctg agtgaaggca ctacctggac caaagcacca tggcggtttg
    17941 aagccggtac acccaatacc gggggcatta ttggtcttgg cgcggcgctg gagtatgttt
    18001 cggcgctggg gcttaataac atagccgagt atgaacagaa tctgatgcat tacgcgctat
    18061 cacagctgga atctgtaccg gatctcactc tctatggccc acaaaacagg cttggcgtta
    18121 ttgcttttaa tctcggtaaa caccacgcct atgatgttgg cagttttctc gataattacg
    18181 gcattgctgt gcgtaccgga catcactgcg ctatgccatt aatggcctat tacaacgtcc
    18241 ctgcgatgtg tcgggcgtcg ctggccatgt ataacaccca tgaagaagtg gatcgtctgg
    18301 tgaccggcct gcaacgtatt caccgtctgc tgggataaca gggaggcact atggctttat
    18361 tgccggataa agaaaaattg ctgcgtaatt ttttacgctg cgccaactgg gaagagaaat
    18421 atctctacat tattgagctg ggccagcgtc tgccagaatt acgcgccgaa gaccgaagcc
    18481 cacaaaatag cattcagggc tgccagagtc aggtgtggat tgtcatacgc cagaatgcgc
    18541 agggaattat tgaattgcag ggcgacagcg atgcggcgat tgtgaaaggg cttattgcgg
    18601 tcgtctttat tctctacgat cagatgacgc cgcaggatat tgtcaatttc gatgtgcgtc
    18661 cgtggtttga aaaaatggcg ctcacccaac atctcacccc atctcgttca caaggtctgg
    18721 aagcgatgat tcgcgcaatt cgcgccaaag ccgctgcact tagctaaact aaagggacag
    18781 ctttcatccg gttggctcac attgccggat ggtcaatgtt tacactgacc tgcacaggag
    18841 tgttttggtt tcaggtgaac ataagcgcca tccgacgttt cagcgtgagt ctccggcaaa
    18901 tacaggaggt ttacaatgaa acgcgcgtct ttgcttacac tcacgcttat cggcgctttt
    18961 agcgccatcc aggctgcctg ggcggttgat tatccgctac ctccaaccgg aagccgactg
    19021 gttgggcaaa atcaaacgta tacggtgcaa gaaggggata aaaaccttca ggccatcgcc
    19081 cgacgttttg atactgcggc aatgttgatc cttgaagcca ataacactat cgccccggtg
    19141 ccaaaacccg gtacgacgat aactattcct tcgcaactgt tattacctga tgcgccgcgt
    19201 caggggatta tcgttaacct tgcagagctg cgcctttatt attatccgcc gggagaaaat
    19261 atcgtgcagg tttatccgat aggtattggc ttgcaggggc tggaaacgcc ggtgatggaa
    19321 acgcgtgtgg ggcagaaaat ccctaaccca acctggacgc ctacggcagg cattcgtcaa
    19381 cgttcgctgg agcgtggcat taaattaccg ccagtcgttc ctgccggacc aaataacccg
    19441 ctaggacgtt acgcactgcg cctcgcgcat ggtaatggcg aatacctcat tcatggtacc
    19501 agtgcgccgg acagcgtcgg tttgcgcgtc agttcagggt gtattcgcat gaatgcaccg
    19561 gatattaaag ccttgttctc cagcgtgcgg acgggaacgc tggtgaaagt gatcaacgaa
    19621 ccggtgaaat attccgtgga gcctaacggg atgcgttatg ttgaagtaca tcgaccacta
    19681 tcggcagaag aacagcagaa cgttcagaca atgccataca cactgccagc aggctttacg
    19741 caatttaaag acaataaggc tgtagatcag aagttagtcg ataaagcgtt gtatcgtcgg
    19801 gcagggtatc cggtttcggt gagcagtgga gcaactcccg cagccagcaa tgcgccttca
    19861 gtagagtcag cgcagaatgg tgaaccagag caagggaata tgttacgcgc gacgcagtag
    19921 tggtaaatag cagacaaaaa aaatggcgca caatgtgcgc catttttcac ttcacaggta
    19981 ctattacttg cggtatttag tagccatgtt gtccagacgc tggttagcac gagctgcgtc
    20041 atctttagca gcctgaacgt cggaacgcat tgcgttcacg tcgttgctca gctggtcaac
    20101 tttagcgttc agagtctgaa cgtcagaaga cagctgatcg attttagcgt tgctggagca
    20161 acctgccagc agagtagaac ccaggattac cgcgcccagt accagtttag tagctttcat
    20221 tattaatacc ctctagattg agttaatctc catgtagcgt tacaagtatt acacaaagtt
    20281 ttttatgttg agaatatttt tttgatggga aggcacttat ttttgatcgt tcgctcaaag
    20341 aagcatcgaa cgctgggttt tagataaaaa aattgagaga aaacaggatg cttccatcgg
    20401 attcatctta gataaagtga gattatatag tgaaatccga tttgattttt tattgcttct
    20461 ggttatcgat taaataaaaa aagcgcccat cagggcgctt cgatatacaa attaattcac
    20521 aaaagcaata ttacaggacg tgaacagatg cggtgttagt agtgccgctc ggtaccagtg
    20581 caccagaaac cataactacg acgtcacctt tgtgtgccag accgctctgc agagccagtt
    20641 ctttacccag acggtagaaa tcatcagtag aagtgatctc tttaaccagc tgcggcacaa
    20701 cgcctttgct cagtaccaac tgatgagccg ttttttcgtt ggtggtcagt gccaggatgg
    20761 tggcatccgg gaagtattta cgtactgcgc gagcagattt accgccctgt gtagcaacca
    20821 cgatcagcgg agcatccagt ttttcagcag tttcaacggc accacggcat accgcttcgg
    20881 taatgcgcag tttacggttg tcattgttga actcgagacg gctgttcatc acgcggtcgg
    20941 tacgttcgca gatggtcgcc atgatagaaa ccgcttccag cgggtattta ccttttgcgg
    21001 attcaccaga cagcatcact gcgtcagtac cgtcgaggat ggcgtttgca acgtcaccgg
    21061 cttctgcgcg agtcgggcgt gggtttttga tcatggaatc cagcatctgg gtcgcagtga
    21121 taacgacttt acgtgcacgg atacattttt cgatcatcat cttctgggcg aagataactt
    21181 cttctaccgg aatttctaca cccaggtcgc cacgcgcaac catgatgccg tcagaggctt
    21241 cgaggatttc gtcgaagttg ttgaggcctt cctggttttc gattttggag atgatgtgga
    21301 tgttttcgcc gccgtgcgct ttcaggtgct cacggatttc gataacgtca gaacgcttac
    21361 gaataaagga agcagcaaca aagtctacgc cttgttcgca accaaagatc aggtcctgtt
    21421 tgtctttttc agccagtgct ggcagggcaa tggaaacgct aggcaggttc acacctttgt
    21481 tttcgcccag gtcgccgttg ttcagcactt tacagataac tttgttacct tcaatggcag
    21541 taacttccat accgatcaga ccatcgtcaa ccagtacggt gttgccaaca gacaggtcag
    21601 tagtgaaacc ttcatacgtt accgcaacca tttcgctgtt gccgataaca gatttatcag
    21661 tggtgaaagt aaaggtctga cccgctttca gagaaacgtc gttaccgcct tccagtttca
    21721 tggtgcggat ttccggacct ttggtatcaa gcaggatagc ggcggtttta ccagttttgc
    21781 tcatcacgtt gcgcagattc tgaatgcgct gaccgtgttc tgcatagtca ccatgagaga
    21841 agttcagacg cataacgttc atgccagcgt ccagcatttt agctaacatc tcttcagatt
    21901 cggttttcgg tccgatggtg caaacaattt tggtcttttt catgacagtc ttagtcttta
    21961 agttgagaag gatgggagaa acttgctttc tgggcgcact gccggaaagc gaatccggta
    22021 ttacgaaagt ggtgttgcct cgctctaagg ataggtgaca tcgaaaaagc gtgcagagga
    22081 atgtgtgctt gtgtctcagc ccaacgtgag tgcctgtttt tgagtcgttg agttctacag
    22141 tccaaagtgc tgaaaccatt caagagtcaa ttggcgcgca ttatacgctg aaattaatcc
    22201 aaaaggaaaa caaaaacagc gtttcaaaaa atatacaact tgttagacaa taaattgtta
    22261 tcaaagattt aacgttccag ggaaaaggtt acgcaaaaac ttcgctgttt gcgcaacgtc
    22321 tggtgccgga gttgtcagtg tgaggataag tgaaagttca tccggtgtat aaatacatca
    22381 tcgctcaatt gctacagtta aaataattta tcgcgttatt taactgattt tgtttgattt
    22441 ttgtttaatt ggttagattg atatatgctg atagttggca tgataaatag gtataaagaa
    22501 tgggaaatcg gacaaaagag gatgaactgt accgagaaat gtgcagagtt gtcggtaaag
    22561 ttgtgctgga aatgcgcgat ctggggcagg aaccaaagca tattgttatc gcaggcgtat
    22621 tacgtacagt attagccaat aaacgcattc agcgcagtga gctggaaaag caggcgatgg
    22681 aaaccgtcat taacgcactg gtaaaatgac cattcaggat gaggcggtaa gcttcatcct
    22741 gatattcttg cttcagttgc ggtccagtta atcattctaa ataacaactg ctgaaattat
    22801 acgaattgcg gtatgtattt taatttataa cggtaatatt atttttattt tctgcaatga
    22861 acgtcacaaa taattgtcgc ttaagttaaa tttatttcaa atgataataa atatcaattc
    22921 acttataatt tcttgctttg taattttaat tgataacgat caatgttaag ggctcagaat
    22981 aatcacatta ttttttctcc taaccataaa ggattagttt atcggcgtta aatcttttct
    23041 catacactat cgggttaggg aaaatatctg gtgttgggga cagagtcagc agcgtattag
    23101 ttgaatgctt aatatcaggc tgctgaattg tcagcactgt gtttgcgaag aggatgcgaa
    23161 ataaatgaac ccggttgatc gtccactatt agatattggc ttaacgcgat tagaattctt
    23221 gcgtatatca ggaaaaggcc ttgctggtct aacaattgcc cctgcgttac tgtcactttt
    23281 gggttgcaaa caggaagata ttgatagcgg cacaataggg ttgataaata cacccaaagg
    23341 ggtgctggtg acccagcgag cgcgatgcac gggttgccac cgctgtgaaa tctcttgtac
    23401 caacttcaac gatggctcag tagggacatt cttctctcgt atcaaaatcc atcgcaatta
    23461 tttctttggc gacaacgggg ttggctctgg cggcggcctg tatggcgatc tcaactatac
    23521 cgcggacacc tgccgtcaat gcaaagagcc gcaatgcatg aacgtctgcc cgattggtgc
    23581 gattacctgg cagcagaaag aaggctgtat taccgtcgat cataaacgct gtattggctg
    23641 tagcgcctgt actacggcat gcccgtggat gatggccacc gtaaataccg aaagtaaaaa
    23701 atcctcgaaa tgtgtgttat gcggtgaatg cgcaaacgcc tgcccaacag gggcgttaaa
    23761 aattatcgag tggaaagata ttactgtgtg aatcttgcaa aggaaaaaat catggctaac
    23821 ggttggacag gtaatatatt aagagtcaat ctcacgacag gaaatattac cctcgaagat
    23881 tccagtaagt ttaaaagttt tgtcggtggc atgggcttcg gctacaaaat tatgtatgac
    23941 gaagtaccgc caggcacgaa acctttcgat gaagcgaata aattagtctt tgctaccggc
    24001 ccattaactg gatctggtgc cccctgtagt tctcgcgtaa atatcacctc actttctact
    24061 tttaccaaag gaaatttagt tgtcgatgcc catatgggtg gcttttttgc agcgcaaatg
    24121 aaattcgctg gatacgacgt cattattatc gaagggaagg cgaaatcacc ggtatggctg
    24181 aagattaaag atgacaaagt tagcctggaa aaagccgatt tcttatgggg aaaagggacg
    24241 cgcgcaacga cggaagaaat ttgtcgattg accagtccgg aaacctgtgt ggcggctatt
    24301 ggtcaggctg gggaaaacct tgttcctctc tctggcatgt tgaatagccg taaccacagc
    24361 ggcggtgcgg gaactggcgc aattatgggt tcgaaaaacc tgaaagcgat tgcggttgaa
    24421 gggacgaaag gggtcaacat tgccgatcgt caggagatga agcgtctcaa cgattacatg
    24481 atgattgaac ttattggtgc gaataacaac catgtcgtgc caagtacgcc gcaatcgtgg
    24541 gcagagtatt cagatcccaa gtcacgttgg acagcacgta aagggctgtt ttggggcgcg
    24601 gctgaaggtg gtccgattga aacgggggaa attccgccag gcaatcagaa cacggtcggc
    24661 tttcgtacct ataaatccgt ttttgactta ggtccggcgg cagagaaata cacagtaaaa
    24721 atgagtggct gccactcttg cccaatccgt tgtatgaccc aaatgaatat tcctcgggtg
    24781 aaagagtttg gcgtgcccag cacaggtggt aacacttgtg tagccaactt tgtccatacc
    24841 accatcttcc cgaacggtcc gaaagatttt gaagataaag acgatggccg tgtgattggt
    24901 aatctggttg gtctgaattt gttcgatgac tacggcctat ggtgtaacta cgggcagttg
    24961 catcgcgact ttacttattg ttacagcaaa ggggtgttca agcgtgttct gcctgctgaa
    25021 gagtatgcag aaattcgctg ggatcaactg gaagcgggtg acgttaactt cattaaagat
    25081 ttttactacc gtctggcgca tcgtgtgggt gagctgagtc acctggctga tggttcatat
    25141 gccatcgcag aacgctggaa tttgggtgaa gagtactggg gctacgcgaa aaataaactc
    25201 tggtcgccgt ttggctatcc ggttcaccat gccaatgaag cgtcagcgca ggtcggttcc
    25261 attgttaact gtatgttcaa ccgtgactgc atgacgcata cccatatcaa ttttattggt
    25321 tcaggcttgc cattgaaact gcaacgtgaa gtggcgaaag agctttttgg ttctgaagat
    25381 gcctacgatg aaaccaaaaa ctacacgcca atcaatgacg caaaaattaa atatgctaag
    25441 tggtcgctgt tgcgggtctg tttacataac gccgtcaccc tgtgtaactg ggtctggcca
    25501 atgaccgttt cgccgctgaa aagccgtaat taccggggcg atctggcgct tgaagccaaa
    25561 ttcttcaaag cgatcaccgg cgaagagatg actcaggaaa aattagattt agctgcagag
    25621 cgtatcttta cgttgcatcg tgcctacacg gtaaaactga tgcaaaccaa agatatgcgt
    25681 aatgaacacg atcttatctg ttcctgggta ttcgacaaga atccgcagat cccggtcttt
    25741 actgaaggta ctgacaaaat ggatcgtgac gatatgcatg cttcgctcac gatgttctac
    25801 aaagaaatgg gctgggaccc acagcttggt tgtcccaccc gcgaaacatt gcagcgtctg
    25861 gggctggaag atattgccgc cgatctggca gcacacaatc tactgcctgt gtaaggaatg
    25921 ggtgagatga accatcggga tgaattgccg ttagcgaaag tcagcgaagt tgacgaggcg
    25981 aagcggcaat ggttacaggg gatgcgtcac cccgttgata cggtaaccga accagaaccg
    26041 gctgaaatcc tggcagagtt cattcgccag cattctgcgg ctgggcagtt ggtggcgcgc
    26101 gccgtgtttc tctcgccacc ctattcggtt gcagaagagg aactgtcagt tttgctggaa
    26161 agcattaagc agaacggaga ctacgcggat atcgcttgta tgacgggaag tcaggatgat
    26221 tactattact caacgcaggc catgagtgaa aactacgcag cgatgtcttt gcaagttgtg
    26281 gagcaggaca tttgtcgcac cattgcacac gccgttcgtt ttgagtgcca gacgtatcct
    26341 cgtccttaca aagtcgccat gctgatgcaa gcgccatatt acttccagga agcacagatt
    26401 gaagccgcga tcgccgcgat ggatgttgca cctgaatatg ccgatatacg gcaggtggag
    26461 tcatcgacgg cggtgttgta cttgtttagc gagcgattta tgacctatgg caaggcttat
    26521 ggcttatgcg aatggttcga ggtagagcag tttcagaacc cctgaaattt cagggagatg
    26581 tcatggatag ggtggacagt tgcagccact gcattagggg ataatcagat gtccttcact
    26641 cgacgcaaat ttgttctggg gatgggaaca gtaatctttt ttactggttc tgcgtcttct
    26701 ctgttagcga acacgaggca agaaaaggaa gttcggtatg ccatgattca tgacgagtca
    26761 cggtgcaatg gctgtaatat ttgcgcccgc gcatgccgta aaactaacca cgtccccgct
    26821 cagggaagcc gtttatcgat agcacacatt ccagtcaccg ataacgacaa cgaaacgcag
    26881 tatcactttt ttcgccagtc atgtcagcac tgcgaagatg ctccgtgcat cgacgtatgc
    26941 ccgacagggg cgtcgtggcg tgatgagcag gggagcgtgc gggtagaaaa atcgcagtgc
    27001 atcggctgca gttattgcat tggcgcttgt ccgtaccagg ttcgctacct taaccctgtc
    27061 actaaagtgg cagataaatg tgatttctgc gctgagtccc gactggcaaa aggctttccg
    27121 cccatttgcg tcagcgcctg tccggaacac gcattgatct ttggtcgcga agatagccca
    27181 gaaattcagg cgtggttgca ggataataaa tactatcaat atcagctacc tggtgccggg
    27241 aaaccgcatc tgtatcgccg gttcggtcaa catttgatta aaaaggaaaa tgtatgaacc
    27301 cgtcgcaaca tgctgaacag tttcagagcc agttagcgaa ctatgtgcca cagttcactc
    27361 ccgaattttg gccggtgtgg ttgatcattg ccggagtatt gctggttggg atgtggttgg
    27421 tgctggggct gcacgccttg cttcgtgctc gtggcgtgaa gaaatcagcc accgatcatg
    27481 gtgagaaggt ttatctttac agcaaagcgg tcagattatg gcactggtcg aatgc
//
LOCUS       DAJVTL010000054        26868 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.054, whole genome shotgun sequence.
ACCESSION   DAJVTL010000054 DAJVTL010000000
VERSION     DAJVTL010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26868
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.054"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..653)
                     /locus_tag="OQQ26_002136"
     CDS             complement(<1..653)
                     /locus_tag="OQQ26_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HCS1857586.1"
                     /translation="MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDK
                     AGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLEN
                     LITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTV
                     GASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKS"
     gene            complement(672..1073)
                     /locus_tag="OQQ26_002137"
     CDS             complement(672..1073)
                     /locus_tag="OQQ26_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HCS1857587.1"
                     /translation="MTWNPLALATALQTVPEQNIDVTNSESALIIKMNDYGDLQINIL
                     FTSRQMIIETFICPVSSISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALS
                     LKSSLEDLLLEITSLVDNALDLAEITEEYSH"
     gene            complement(1200..1931)
                     /gene="rlmB"
                     /locus_tag="OQQ26_002138"
     CDS             complement(1200..1931)
                     /gene="rlmB"
                     /locus_tag="OQQ26_002138"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HCS1857588.1"
                     /translation="MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALE
                     SQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLART
                     MRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRS"
     gene            complement(2111..4552)
                     /gene="rnr"
                     /locus_tag="OQQ26_002139"
     CDS             complement(2111..4552)
                     /gene="rnr"
                     /locus_tag="OQQ26_002139"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HCS1857589.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVEL
                     HIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEA
                     GVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQG
                     DQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQT
                     QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYY
                     RFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIA
                     AATKAKRAAKKKVAE"
     gene            complement(4591..5016)
                     /gene="nsrR"
                     /locus_tag="OQQ26_002140"
     CDS             complement(4591..5016)
                     /gene="nsrR"
                     /locus_tag="OQQ26_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HCS1857590.1"
                     /translation="MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVK
                     IINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(5221..6519)
                     /gene="purA"
                     /locus_tag="OQQ26_002141"
     CDS             complement(5221..6519)
                     /gene="purA"
                     /locus_tag="OQQ26_002141"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HCS1857591.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(6623..6820)
                     /locus_tag="OQQ26_002142"
     CDS             complement(6623..6820)
                     /locus_tag="OQQ26_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HCS1857592.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(6902..7906)
                     /gene="hflC"
                     /locus_tag="OQQ26_002143"
     CDS             complement(6902..7906)
                     /gene="hflC"
                     /locus_tag="OQQ26_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HCS1857593.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNK
                     PLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
                     "
     gene            complement(7909..9168)
                     /gene="hflK"
                     /locus_tag="OQQ26_002144"
     CDS             complement(7909..9168)
                     /gene="hflK"
                     /locus_tag="OQQ26_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HCS1857594.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKV
                     LGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASN
                     TSSTSQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(9254..10534)
                     /gene="hflX"
                     /locus_tag="OQQ26_002145"
     CDS             complement(9254..10534)
                     /gene="hflX"
                     /locus_tag="OQQ26_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HCS1857595.1"
                     /translation="MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT
                     EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
                     ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEE
                     NKPIRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI"
     gene            complement(10611..10919)
                     /gene="hfq"
                     /locus_tag="OQQ26_002146"
     CDS             complement(10611..10919)
                     /gene="hfq"
                     /locus_tag="OQQ26_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HCS1857596.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
                     "
     gene            complement(11005..11955)
                     /gene="miaA"
                     /locus_tag="OQQ26_002147"
     CDS             complement(11005..11955)
                     /gene="miaA"
                     /locus_tag="OQQ26_002147"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HCS1857597.1"
                     /translation="MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA
                     LIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATR
                     QLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG"
     gene            complement(11948..13795)
                     /gene="mutL"
                     /locus_tag="OQQ26_002148"
     CDS             complement(11948..13795)
                     /gene="mutL"
                     /locus_tag="OQQ26_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710035.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HCS1857598.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENCLDAGATRIDI
                     DIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQQEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT
                     AFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL
                     ETPLPLDDEPQPAPRAIPENRVAAGRNHFAEPAAREPVAPRYSPAPASGSRPAAPWPN
                     AQPGYQKQQGEVYRQLLQTPAPMQKPKVPEPQEPALAANSQSFGRVLTIVHSDCALLE
                     RDGNISLLALPVAERWLRQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSALEKAQSALA
                     ELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLM
                     SEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE"
     gene            complement(13805..15139)
                     /gene="amiB"
                     /locus_tag="OQQ26_002149"
     CDS             complement(13805..15139)
                     /gene="amiB"
                     /locus_tag="OQQ26_002149"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HCS1857599.1"
                     /translation="MMYRIRNWLVATLLLCTPVGAATLSDIQVSNGNQQARITLSFIG
                     DPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLT
                     ENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPF
                     KTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVT
                     IAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRS
                     ATGASVWVLSNRRANSEMANWLEQHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFG
                     HSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEER
                     LLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN"
     gene            complement(15158..15619)
                     /gene="tsaE"
                     /locus_tag="OQQ26_002150"
     CDS             complement(15158..15619)
                     /gene="tsaE"
                     /locus_tag="OQQ26_002150"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HCS1857600.1"
                     /translation="MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG"
     gene            complement(15591..17138)
                     /gene="nnr"
                     /locus_tag="OQQ26_002151"
     CDS             complement(15591..17138)
                     /gene="nnr"
                     /locus_tag="OQQ26_002151"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HCS1857601.1"
                     /translation="MTDHTMKKKPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLR
                     AGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLLAQESDKPLP
                     EEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLQQAPRESISQLIDHANSH
                     PAPIAAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDPLG
                     LDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEA
                     ALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQE
                     WGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGA
                     LLGQKLSPYDAACAGCVAHGASADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHD
                     ESSNSAP"
     gene            17137..18276
                     /gene="queG"
                     /locus_tag="OQQ26_002152"
     CDS             17137..18276
                     /gene="queG"
                     /locus_tag="OQQ26_002152"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HCS1857602.1"
                     /translation="MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWL
                     DKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVS
                     RYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAP
                     ELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEH
                     PLLDEHIAWAIAQQIERRNACIVEVQLPKKQHLVRVIEKGLPRDA"
     gene            complement(18259..18312)
                     /locus_tag="OQQ26_002153"
     CDS             complement(18259..18312)
                     /locus_tag="OQQ26_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857603.1"
                     /translation="MRFYFYSQAVDESGVTR"
     gene            complement(18545..18620)
                     /locus_tag="OQQ26_002154"
     tRNA            complement(18545..18620)
                     /locus_tag="OQQ26_002154"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18585..18587),aa:Gly,seq:gcc)
     gene            complement(18656..18731)
                     /locus_tag="OQQ26_002155"
     tRNA            complement(18656..18731)
                     /locus_tag="OQQ26_002155"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18696..18698),aa:Gly,seq:gcc)
     gene            complement(18768..18843)
                     /locus_tag="OQQ26_002156"
     tRNA            complement(18768..18843)
                     /locus_tag="OQQ26_002156"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18808..18810),aa:Gly,seq:gcc)
     gene            complement(19054..19599)
                     /gene="orn"
                     /locus_tag="OQQ26_002157"
     CDS             complement(19054..19599)
                     /gene="orn"
                     /locus_tag="OQQ26_002157"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HCS1857604.1"
                     /translation="MSANENNLIWIDLEMTGLDPELDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELVTLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
     gene            19694..20746
                     /gene="rsgA"
                     /locus_tag="OQQ26_002158"
     CDS             19694..20746
                     /gene="rsgA"
                     /locus_tag="OQQ26_002158"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HCS1857605.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKTLEEALTGRISIFAGQSGV
                     GKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            20842..21810
                     /gene="psd"
                     /locus_tag="OQQ26_002159"
     CDS             20842..21810
                     /gene="psd"
                     /locus_tag="OQQ26_002159"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HCS1857606.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            21832..25155
                     /gene="mscM"
                     /locus_tag="OQQ26_002160"
     CDS             21832..25155
                     /gene="mscM"
                     /locus_tag="OQQ26_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HCS1857607.1"
                     /translation="MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPE
                     IIEALQSALNALEERKGSLERIKQYQEVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQATSQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVT
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(25306..26808)
                     /gene="yjeM"
                     /locus_tag="OQQ26_002161"
     CDS             complement(25306..26808)
                     /gene="yjeM"
                     /locus_tag="OQQ26_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/gamma-aminobutyrate family transporter
                     YjeM"
                     /protein_id="HCS1857608.1"
                     /translation="MPHMIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIF
                     SALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVST
                     SAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARIT
                     AVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIF
                     AYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGS
                     VNLGNITYVLMKSLGVTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYS
                     PLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTIFILLVSFGGGTASAFFNK
                     LTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVTFANV
                     FTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD"
BASE COUNT         6294 a         7467 c         6741 g         6366 t
ORIGIN      
        1 ctacttttat tgctaccgcc aattccggct tccgccagct tttcatcaag atcgcgaccg
       61 tctgcgactt tttccaactg tgcagcagca tccaggcgag cctgacgttc ggcctgacgc
      121 gtttgcaggc gttttaagga ttctgccgct gtcgaaacgc tggaagatgc gccaacggta
      181 gaggttgtta cagcctgttg tgcacgctgc atggcttcag tggctttaac gacttccatt
      241 tgctgctcaa actgagcgat acgctgcgct gtcgctgtaa ctgctttttc cacgccatca
      301 cgggagactt ccagattcga caacacttgc tcttcagcgg taatgagatt ctcaaggcgc
      361 gcgatttctt cagcaacttc gttaatcaac gacggattaa cgttcttgct taacgcttcc
      421 agcgcacggg cttccagact ggctttgcgc tcacgtaaat ctttcagctt atcgtgactt
      481 aatttcaccc gcgccagcag atcaacgcga gattttccgg ctttatcgag ttcagcttta
      541 gcgtcacgaa tatgctgttc cagcatgcgc acgccctggg tttcttcaat ggattcttcc
      601 gcctgggaga taaacgattt ccccagcgta aataaacttt ttaaaattcc cataaatacc
      661 cgtccttgta attagtgtga atattcttct gtaatttcag ccagatccaa tgcgttatct
      721 accagcgagg ttatctcaag caggagatct tcaagagaag atttaagcga taacgccccg
      781 aaaacaatgt aatactcttc ctgttgcacg ctggagattc ctaccgatga caacggcatc
      841 atcttctgat ttcttaataa gaaggtatta aattcatctg gattgctgat actacttacc
      901 ggacaaataa aggtttcgat aatcatttgg cgggaagtaa aaagaatatt gatttgcaaa
      961 tcgccataat cattcatttt aataattaat gcgctctcgc tatttgtcac atcaatattt
     1021 tgttcaggta cagtttgcag cgccgtcgcc agcgccaacg gattccatgt catatattat
     1081 tccatataga tttagtttaa atattaataa aatgaatatt tgcagtacgt aattatctta
     1141 ccagctatag acaaaaaaaa accatccaaa tctggatggc ttttcataat tcagacgaac
     1201 tagctgcgct gacgaaccgc ttcaaataag caaattccgg ttgcaaccga aacgttcagg
     1261 gaagaaacac ttcctgccat tgggatgctg atcaactcat cgcaatgttc acgggtcagg
     1321 cgacgcatac cttcaccttc cgcgcccatc accagcgcca ggcgtccggt cattttgctc
     1381 tgatagagtg tatgatccgc ctcgcctgcc gtaccgacga tccagatatt ctcttcctgc
     1441 aacatacgca tggtgcgcgc aaggttagtc acccgaatca gtggaacgct ttctgccgcg
     1501 ccgcaggcta cttttttcgc cgtagcgttg agctgtgcgg agcgatcttt cggcacaatc
     1561 accgcgtgaa cgccagcagc gtccgcgcta cgcaggcacg cgccgaggtt gtgcggatcg
     1621 gttacaccgt cgaggatcag caggaacggt tgatcgagcg aagcgatcag atccggcaga
     1681 tcgttttcct gatactgacg tcctggcttc acgcgggcga taatgccctg atgcacggca
     1741 ccgtcgcttt tctcgtcgag atattggcgg tttgccaact ggataaccac gccctgagac
     1801 tcaagggcgt gaatcagcgg taacagacgt ttatcttcac ggccttttaa aataaagact
     1861 tcctgaaaac gttcaggggc gcgctccagc agggcctgca ctgcgtggat gccgtaaatc
     1921 atttcgctca ttaatgtact cgttgtttac gttttgcctg atgcactacg tttatccggc
     1981 ctacatgatc tctgcaatat attgaatttg cgtgattatg taggccggat aaggcgttca
     2041 cgccgcatcc ggcatgaaca aagcgcattt tgtcagcaat ctaaccctct tcttttaaag
     2101 agggtattga tcactctgcc acttttttct tcgccgcacg cttcgctttg gtcgctgcgg
     2161 ctattttctg cgttttcgcc gatggctttt tcgcttttct cgcgtctttc ttcgccgctt
     2221 tcggcttcgt ttttttctca ccgcggaagg cgctgtctgg ctcaaagttt acctttttac
     2281 cgacctgacg acgcttgccg ccttttttgc ctgcatcgcc ttttttcgct ttctcgcgcg
     2341 ccgttttacc gacgttgcgc ggtgcgcgtt cactggagat cagactaaag tcgattttgc
     2401 gctcgtccat attaaccgct tcgacgcgaa cttccacgcg atcgcccagg cgataagtct
     2461 ggccgctgga ttcccccatc aggcgttgcc ctacctggtc aaagcgatag tagtcattgt
     2521 ccagcgaaga gacatggacc agaccatcaa tgaacaagtc gtccagacgg acgaagaagc
     2581 caaagccagt gacgctggaa attacgcctt taaagacgtt acctacctgg tcgagcatga
     2641 agtcacactt cagccagtca gctacatcgc gcgttgcttc gtcggcacga cgttccgcca
     2701 tcgaacagtg ctgacccagt tgcaacatct cttccatcga ataatgatag ccgccggttt
     2761 cagtggtgtt gccctgatgc ccctgctctt tcgccagcag atacttaatg gcgcggtgca
     2821 gcgtcaggtc aggataacga cgaatcggcg aagtaaagtg cgcataggac tgcaatgcca
     2881 gaccgaagtg accacggttt tccggatcgt aaatcgcctg tttcatcgag cgcagcagca
     2941 tggtttgcag catttctgca tcaggacgat cggcaaccga ctccagcagc tccgcgtagt
     3001 cacgcggttc cggcttgtta ccgcccggca gttccagccc cagctccgcc agcactgaac
     3061 ggaaagaggt aatcgcttcg gtgctcggct tatcgtgaat acggaacagt gccggttctt
     3121 tggctttctc aacgaaacgc gccgccgaga tattcgccag aatcatgcac tcttcaatta
     3181 atttgtgcgc gtcgttacgc tgagtctgtt cgatacgttc aatacggcgt tcagcgttga
     3241 aaatgaactt cgcttcttcg ctctcaaatg agatccctcc gcgttcttca cgggctttat
     3301 ccagcacttt atagaggtta tgcaactctt cgagatgctt aaccagcggg gcgtactgct
     3361 cgcgcagatc ctgatcgccc tgcagaatat gccagacttt ggtgtaggtc agacgcgcgt
     3421 gagagctcat caccgcttcg tagaatttgt agccagtcag gcggcctttc gacgaaaccg
     3481 tcatctcgca caccatacac aggcggtcta cctgcgggtt gagcgagcac aggccgttag
     3541 agagcacttc cggcagcatc gggataacct gcgaagggaa gtacaccgac gtaccacgat
     3601 tacgcgcttc tctgtccagc ggcgttggcg gacgcacata gtagctgacg tcggcaatcg
     3661 cgacccataa acgccagccg ccgccgcgtt ttttctcgca gtaaactgca tcgtcaaagt
     3721 cacgggcgtc ttcgccatca atggtgacca gcggtaaatc gcgcaaatcg acacggcccg
     3781 cttttgcttc ttccggcact tcttctttca gccccgcaac ctgttgctca acagcctgcg
     3841 gccagatata cggaatttca tgggtacgca gagcgatatc aaccgccatg ccagtgccca
     3901 tattgtcgcc cagcacttcg acgattttac ccaccgcttt ggtgcggcga gtcggacgct
     3961 gagtcagttc gactacgacc acaaagccca tccgcgcgcc catgatctga tcgggcggga
     4021 ttaagatatc gaagctcaga cggctatcgt caggaaccac aaagccgacg cccgcttcgg
     4081 taaagtagcg accaacaatc tggctggttt ttggcaccag tacgcggaca atacgcgctt
     4141 cacgacgacc tttacggtca gcacccagcg gctgcgccag cacctgatcg ccatgaatac
     4201 aggttttcat ctgctcgctg gagagataca aatcatcttt acgcccttca acccgcagaa
     4261 agccgtagcc atcacggtgg ccaataacgg tacctttcac caggtcgagg cgttccggca
     4321 gcgcatagca ctgacgacga gtgaagacca gttgaccatc gcgctccatc gcgcgtaggc
     4381 ggcgacgcag gccttcaagc tgctcttcgc cttcaatgtg cagttctacc gccagctcat
     4441 cacggctggc cggtttttca cgtttggtta aatgttcgag gataaattcc cgactaggga
     4501 tgggattcgc gtatttttca gcttcgcgtt cctggaaagg atcttgtgac atctcggttc
     4561 ctccgttgtc atctctgatg aagattttcg tcactccacc agcaataatt tataaagcgg
     4621 ttgattctct tcaaccaaat cggcaagcgt gtagttatcc agttccgtaa gaaaactttg
     4681 cacggcctta gaaagcgcct gtttcaaccg acaggcaggt gtaatgtggc aaaactcact
     4741 gctgcaattc accagcgata agggctccag ctcgcgcacc acatcaccaa tacgtatcgc
     4801 actcgccggt ttacccaggc gaatgccgcc attttttcca cgaacagcag tcacgtagcc
     4861 ggcacgacta agttgattga ttattttgac catatgatta cgggagacgc cgtagacgtc
     4921 agtcacttca gaaatactgg tcatccgccc ttctggcaat gacgccatgt agatcagcgc
     4981 acgtaatccg taatcagtga aactcgttaa ctgcacatca acctcaaaag ggaaatcggg
     5041 aaaaaataca tttatattga tgataaacca gccacaagct gtgtcgctaa tttatttcag
     5101 ttcggggaag gaaaaaagcg aggatttaac actgtgtcgg atagcgtaat ggcttaaccg
     5161 acacagcaat gtatcacact gttagcccgg caggcaaaat atctgccagg cgtaccagaa
     5221 ttacgcgtcg aacgggtcgc gcagaatcat ggtttcagta cgatccggac cggtagagat
     5281 gatatcgatc ggcacaccgg tcagctcttc aatacgcttg atgtagttca gcgccgcctg
     5341 cggcaggccg ctacgatctt tcacgccgaa agtggattca gaccagcccg gcatggtttc
     5401 gtaaatcggc tctacacctt tccagtcgtc agctgccagc ggagtggtag tcacttcgcg
     5461 accatccggc atacggtaag ccacgcagag tttaacctct ttcaggccat ccagaacgtc
     5521 cagtttagtc aggcagaagc cagacaggga gttcaactgt accgcacgac gaacggcaac
     5581 ggtgtccagc cagccggtac gacgacgacg acccgtagtt gcgccgaatt cgttaccctg
     5641 cttgcagagg aactcgccag tttcatcaaa cagttcggtc gggaaaggac ctgcacctac
     5701 acgagttgag taagctttga ggatacccag aacgtaatca acataacgcg ggcccaggcc
     5761 ggaaccggtc gccacgccac cagcagtggt gttggaagaa gttacgtacg gataagtacc
     5821 gtggtcgata tccagcagcg taccctgcgc accttcgaac atgacgaaat cgccacgctg
     5881 acgcgcctgg tcgagcaggt cagaaacgtc aaccaccata gaagtcagga tgtcggcaac
     5941 agccatcgta tcatccagaa ctttctggta atcaaccgct tcagctttgt agtagttaac
     6001 caactggaag ttgtgatatt ccatcacttc tttcagtttt tcagcgaagg tttctttgtc
     6061 gaaaaggtcg ccaacacgca gaccgcgacg tgccacttta tcttcataag caggcccgat
     6121 accacgaccg gtggtgccga tcgctttcgc gccacgcgct ttctcacgcg cgttatccag
     6181 cgcaacgtga taatcaagga tcagcggaca tgcttcagac agcagcagac gctcacgaac
     6241 ggggatgcca cggtcttcca gttctttcat ctctttcatc agcgcagccg gagacagcac
     6301 aacaccgtta ccgatgatgc tggttacatt ctcgcggaga atacctgatg gaataagatg
     6361 gagaacggtt ttttcaccgt tgattacgag agtatggcct gcgttgtgac cgccctggta
     6421 gcgtacaaca tatttagccc gttcagtcag aagatcgacg atcttacctt taccttcgtc
     6481 accccattgg gtgcccagta cgacgacgtt gttacccatt tttcaaaatc accgtttgct
     6541 taaaaatgga ttctaccatc gctttttcag agttacagca ctttttgcac tcaaaaatga
     6601 cctcgatcag tctgtttttt gttcagccaa tcgttttcct caacatgtag tagaccacaa
     6661 cgcccgcaac cacaagtcca ccgccaaaac gacgtaaaat attatcgggc aaattggtca
     6721 tcgcagagat catcttcttc catgccttcg ggtaaagcat cggccctaaa ccttccagta
     6781 ccaaaaccag ggcaagcgcc agccagattg tcgaattcat tcattatcct tatagaaaaa
     6841 gaaaaccacc gacatccctg aggatgcggt ggctttattg acctgtaccg cagtcgttat
     6901 attaacgcgt tgcggaagtc ggcgtcttca tgtagcggaa gaaatcgcta tccgggctca
     6961 tgaccatcac gtcctgattg ccagagaagc tgttctcata agcacgcagg ctacggatga
     7021 atgcgtagaa gtccggatct ttactgaatg catcagcaaa cagtttagct gcttcggcat
     7081 cgccttcacc acgcatgatg cggccctgac gctcagcttc tgccagcgtt ctggtcactt
     7141 catagtcggc agtcgcgcgc agtttttccg cttcttcctg accttgtgaa cggtgacgac
     7201 gcgctaccgc ttcacgctcg gcgcgcatac ggttgtagat cgcttcagac acttcggtag
     7261 gcaggttgat ctgcttgata cgcacatcga caacttcaat acccagcgcc gccatactgt
     7321 tcgggttgat gaccggtact ttgcccttcg tctcagccgt tacgcgctct gccgcttcgg
     7381 caatggcgtt atctgccgca ggggtagtaa cttcatcttc tgtacccgca gaaccggagt
     7441 tcagcgcgtc acgtacttcg agggtcagac gaccacggga atcggtgacg atgtctttca
     7501 cgtccaggcg accaatttca gaacgcagac ggtcagagaa cttacgcttc aacagcactt
     7561 ccgcttgcga aatgtcgcca ccacccgttg ccaggtagta acggctgaaa tcgctgatgc
     7621 gccatttgat gtaagagtcg acgatcaggt ctttcttctc tttggtcaca aagcggtctg
     7681 cctggttgtc catggtctga atacgtgcgt cgagcatttt caccgtttca atgaacggta
     7741 tcttgaaatg cagacccggc tcataaacca gaggtttgtt gtcatcgtca cgcagtacct
     7801 taccaaaacg cagcgtaata ccgcgctcac cttctttgac gacaaagaca gacatgtaaa
     7861 gcactaccag cacgatgatg ataatcgcga taactgactt acgcatcgtt attccccctg
     7921 acgctggtag tcgttacgct gcgcgttggc gcggcgttgg tccataatat cgccctgact
     7981 ggtggacgac gtgttgcttg ctccactggt tgtggaggaa gaggctggcg gcagacgcag
     8041 cagattgctg gcaccgttat cgctcttcgc cgcaggggcg ttaccacctt tcagcatctg
     8101 gtctaacggc agaaccatca ggttgccacc tttgtcgtta accagcactt tgcgggtgtt
     8161 acccaacact ttttccatcg tctcgatata cagacgctcg cgagtaattt ccggcgcggc
     8221 tttatattcc ggcagaagtt tagcaaagcg cgccacttca ccctgagctt ccaagatggt
     8281 ctgggccttg tacgcacgcg cctcttcgag gatacgttgc gcctgaccgt tcgcacgcgg
     8341 ctgaacttcg ttggtatacg cttctgcttc acgaatgtat tgctgttcgt tttcacgcgc
     8401 ggcaatcgca tcgtcaaacg ccgcttttac ttcttccggc ggacgagctg cctggaagtt
     8461 gacgtccagc agagtgatac ccatgtcata cggacggata gtctcttcca gttcgcgctg
     8521 agtatcgcta cgaatcacgg tacgaccttc cgtcagaatg cggtccatgg tgtatttacc
     8581 gataaccccg cgcagggcgc tgtcggtagc ctgacgcaga ctgtcatccg ggctggtcac
     8641 gctatacaga tatttttccg gattggtaac gcggtactgc acgttcatct caacgcgcac
     8701 tacgttctcg tccgacgtca acatcacacc ggaagcggcc agttcacgca cggcttccac
     8761 gtttaccggt ttgacttcgt cgataaacgt cggtttccag ttcagacccg gctcaaccag
     8821 atggctgaat ttaccaaagc gtgttaccac gccgcgttcg gcttctttaa tggtatagaa
     8881 accactggcc gcccagataa tgacaatcgc tgccgctgcg atggtaacga cacgaccgcc
     8941 aagctgcggg cgcgggcctt gcgatgaact gccaccgcca gatccggtgc ctttaccgcc
     9001 gcccagacca ccgagctttt tgctcagttt gcggaagata tcatctaaat caggtggccc
     9061 ttgatcgcga ccgcctttgt ttccatttcc ctcagagttg ccgccaggtt tgctgcttcc
     9121 ccacgggtcg cggtcttgtc cgttattacc gggctgattc cacgccatgt ttgtgctcca
     9181 tatttgttat gcggtgatcc ctgttgtctt tcgacgccag aggatatgac tccacgcttc
     9241 agacgctacg ccgttagatc aggtaatcga tcaacgccgg ttcttgttta cagaggcgac
     9301 gccagtcaac gatcggcata cgaacttgca gacttacgct gccgtcctcc tccatccact
     9361 ctttttctat tgcctgaagc tgataaaaac gacttctcag acgtccttcc tgcggtggta
     9421 gacgcaatgt atgctgcgcc acctcgccgg aaagccgctc cgtcaaagcc tgaaaaagct
     9481 gtggtatccc cgctccggtc tgtgcggaaa gccagacacg gatcggtttg ttctcttcgt
     9541 cccgatcaat acgcggttcg aaatcttcca gcatatcgat cttgttcatc accagcaggg
     9601 ttgggatctc gtgagcgtcg atctcttcaa gaaccgtatt caccgcttcg atgttttctt
     9661 gtacacgtac atccgccgca tcaatgacgt gcagcagtaa tgtggcttgc cgcgtctctt
     9721 gtaacgtggc tttaaatgct gccaccagat cgtgcggcag gtggcgaata aaccctacgg
     9781 tatctgcaag tacggtttca ccgacatccg cgacgtcaat acgccgcaac gtcgggtcga
     9841 gggtggcaaa caactggtct gccgcgtaga cccgcgcttc ggtgatgcga ttgaaaaggg
     9901 tagatttacc ggcgttggta tatcccacca gcgaaacagt aggaacgtcg gctttgatac
     9961 gcgattgccg cccctgctca cgctgctttt caactctttc caggcgcgac tgtatctgca
    10021 cgatgcgatt acgcaacaaa cgacggtcgg tttcgagctg ggtttcaccc ggaccacgca
    10081 aacctatccc gcctttctgt ctttcaaggt gggtccagcc acgcaccagg cgcgtagcca
    10141 gatggcgcag ctgcgccagc tcaacctgca acttaccctc atgggtacgc gcacgttggg
    10201 cgaaaatatc taaaataagg ccggtgcggt cgataacacg acactcgcac aaacgctcca
    10261 ggttacgctc ttgcgccggg ctcagggcat ggtcaaaaag aacgaccgaa gcacccgtcg
    10321 ctttgacagc ttccgcaatt tcaactgctt taccttcacc tacaaaatac tttgggtgcg
    10381 gcgctttacg gctaccagta atcacctgca atgcttcgac accggcggaa gagaccagag
    10441 attcaaactc ctggaggtct tccatatctt tgtcttgcgt aaaatagatg tgtaccagta
    10501 ccgcctgctc accagcatca taacggtcaa acaagcgtat aaccctctaa atagatcagc
    10561 ggggaacgca ggatcgctgg ctccccgtgt aaaaaaaaca gcccgaaacc ttattcggtt
    10621 tcttcgctgt cctgttgcgc ggaagtattc tgcgcgctgc taccatgatg gtagttactg
    10681 ctggtaccgc caccggcgtt gttactgtga tgagaaaccg ggcgagacgg gacaacagta
    10741 gaaatcgcgt gcttgtaaac catctggctg accgtgtttt tcaacaggat cacgaactga
    10801 tcaaaagact cgatttgccc ttgcagctta ataccattca ccaaataaat agaaaccgga
    10861 acacgttccc gacgcagtgc gttcaggaac ggatcttgta aagattgccc cttagccatt
    10921 ctctcttttc cttatatgct tatttgtact ttgaaccttt cgattctgaa aaaattgcgc
    10981 acgatacgtc tcaattgtac acattcagcc tgcgatagca ccaacaacct gtaatacttc
    11041 gtcacgcgcc tgttctggtt tttcactgtc aagccagtga accccttccc aaccacgcag
    11101 ccaagttatc tgccgcttcg ccaactgtct cgtggcgcaa acacctcgat aaaccatttc
    11161 atcgtatgag atttcacctt caaggtaaga ccacatctgg cgataaccca cgcaacgaat
    11221 ggaaggcaag tccgtatgca aatctcctcg ggcaaaaagc gcccggactt ctgcttcaaa
    11281 acctgaagcc aacatctgat gaaaacgctg ctcaatgcgt tgatggagca gttcacggct
    11341 cgccggggcg atggcgaact gatgcacctg atacggtaga gcgtctcctg acgtttgcgt
    11401 cagttccgtt aaagttttac ccgaaatgaa aaaaacttcc agtgcccggg aaagcctttg
    11461 tggatcattt ggatgaatcc ttgctgccgc aaccggatct acctcctgaa gttgacgatg
    11521 caatgactcc caaccttgct ctgccgcctg ttgctcaatt ctggcccgta cttccgggtc
    11581 tgccgacggt agcggcgaca acccttccag caatgccttg aaatacaaca tcgtaccgcc
    11641 cactaacagt gggatccgcc ccgccgcggt gatatcggcc atttccgcca gcgcatcgcg
    11701 gcgaaaatca gcagccgagt aagcctgcga cggatcgcga atatccagca atcggtgcgg
    11761 cgcggcgagt aactcttcag cgttcggctt cgccgtcccg atatccatcc ctttgtaaat
    11821 aagggcagaa tcaacgctta tcaactctac tggtaaaatt ttacgcagct caatggctaa
    11881 cgccgtttta ccggaggccg tcggccccat caaaaaaatc gccttaggca ggctcgcctt
    11941 actgatatca ctcatctttc agggctttta tcgccggatg taaatcaaca gattgtaaca
    12001 gaccacccgg cggcgttttc acaagttgcg gacataaccg ttccacgtcc gccagcaggg
    12061 ttatggcctg tgccattgac cactgcgcat gttcgctcat cagatttcgt gcaatccact
    12121 gcgcaatatt gccaggttcg aatacggact gcttcgccag gtaacctatc agttcaggaa
    12181 tcaagatttg taaattttgt tggcgtaagg gtaaaggcac ggccctgatg gtcacatgct
    12241 gcgcatcgga ctggaaatca atacccaatt ctgccagagc agactgcgct ttttctaatg
    12301 ccgatttttc ttcgccagaa acttttagcc gcaacggaat cagcagcggc tgagcgcaaa
    12361 ctggcgcttc acccggcgtc agttgtacct gacgcagcca acgttctgcc actggcaagg
    12421 ctaaaagtga aatgttgccg tcgcgctcca gcaacgcaca gtcggaatgg acgatagtca
    12481 gtacccggcc aaaactctga ctgttcgccg caagtgcagg ttcctgcggt tctggcactt
    12541 ttggtttttg catcggcgcg ggcgtttgca aaagctggcg atacacttca ccttgctgtt
    12601 tctggtaacc tggctgcgca ttcggccagg gggcagccgg acgactgcct gaggcgggcg
    12661 caggagagta gcgcggagct accggctcac gagctgccgg ttctgcaaag tgattgcgcc
    12721 ccgccgccac gcggttttcc ggaatggcac gcggtgcagg ttggggttca tcgtccagcg
    12781 gtagcggcgt ttccagttgc tgttgtagca cgctcagcac gccctgatag ataaagtcat
    12841 gcaccagacg cgactgatgg aaacgcactt cgtgtttggc ggggtgcacg ttgacgtcca
    12901 cctgatgcgg gtcgatctcc agatacaaca caaacgccgg ttgttgatcg gcccccagtt
    12961 tgtcttcgca ggcctggcgg atcgcgtgat tgatcaggcg atcgcgcatc atgcgaccgt
    13021 tcacgtagca atactgaatt tctgccagtg cgggcgtggt gtgatttgga tcggccaccc
    13081 agccgcgcag ggtgagatcg ccatgttgcc attcaatcgc cagcgcttgt tcgagaaaag
    13141 cggtgccaca aatcgcgcct aagcgccgtt ctttttgccc gccttccggc actgcacggt
    13201 actgacgcac aattttaccg ttatgcgaca ggttgatcgt gacgtcgaaa cgcgccagcg
    13261 caatgcggcg gatgatttca tcgatatggt taaattcagt tttctcggtg cgcaggaatt
    13321 tgcgccgcgc cggggtgttg tagaacagat ccagcacctc cagcgtcgtt cccaccggat
    13381 gcgccgccgg tttaaccgtc acgtccatgt cgcgtccttc ggcataggcc tgccaggctt
    13441 cctgctgttc tgcggtgcgt gaagtgagcg tcaggcggga aaccgaactg atactcgcca
    13501 gcgcctcacc gcgaaagccc aggctgataa tggcttcgag atcgtccaga gaggcgattt
    13561 tactggtggc atgacgagcc agcgccagcg ccagctcatc ttttttgata ccgcagccgt
    13621 tatcacgaat gcggataagt ttcgccccac cgcgttcgat atcaatatcg atacgcgtcg
    13681 cacctgcatc gaggcagttt tccaccagtt ctttgactac cgacgcaggt cgctcgacca
    13741 cctcacctgc ggcaatctgg ttcgccagtt gtggcggcaa gacctgaatt ggcatcaatc
    13801 gtccttagtt tggcagcgtg cgatctggcg tcgtcaccgt actggcagtt tgtgccgttg
    13861 caccctgcgg cgcagattgc atcggatgcg caaggaagta attgcgcagg cctttgtaaa
    13921 tggcttctgc cagctgttgt tggtaatcgt cgctcgccag caaacgttct tcgctgttgt
    13981 tgctgataaa accggtttcg accagtactg atgggatatc cggcgagcgc agaacgccaa
    14041 ggctggcgtg ttctggtcga cgtttatgta tttcgccaat gcgttgcaac tgactgatca
    14101 tactggttgc tacatcatac cctacccgct gggaatgacc gaactgtaaa tccagcaccg
    14161 cctggcttaa ataggggtca gactgactgt tcgccagcac atcgcccgcc ccacccagca
    14221 gctccgactg tttctcgtgc tgctccagcc agttggccat ttcgctgttg gcgcgacggt
    14281 tagagagcac ccatacggat gcgccagtcg cactgcggtt cggtgcggca tcagcgtgaa
    14341 tcgatacgag gaaattggcg ttttgcttac gtgccacatc actgcgcccc atcaccgaga
    14401 taaagtaatc cccgtcacgg gttaaaacgc ctttaaacat cggatcgtca ttgagcaaag
    14461 tacgcaattt acgcgcgatg gcgatggtga catttttctc ccgcgtacca ccggggccga
    14521 tagcgccagg gtcctgaccg ccgtgtccgg catcaatagc gatgataatt ttatcgccag
    14581 tgttagccgt cgcgcgcgct gccggacgcg ttaccgtatt actgctgata acacccgtag
    14641 tgcggttact ttccgtttta aacggattgc gcgccggttc gctgacgcgc ggtgcgacaa
    14701 ccgcaggcgt ttcaacgcgt ttcgcaacca cgggcggcgg aggaggcggt ggcggcacat
    14761 cggcgttaat cgtaaagacg acagtgtaat tgctgccatt ctgccgcttc accgcttcgg
    14821 ttttaccgtt ttcggtaaga tcgaccacca gccgtagcgt ttgtgcatct ttaggcgttc
    14881 cagagcgaat cgccttcacc agattattgc cgctgaacaa caacggcagt ccctgaatca
    14941 cgcccgtttg tttgatatcg agcgccacgg tgcgtttgct ttgatggcta aacgcataat
    15001 caggatcgcc aataaaactc aacgttatcc gcgcctgttg attaccgtta gaaacctgaa
    15061 tatcagagag cgtcgcggca cccaccggcg tgcacagcag cagcgtcgct accaaccaat
    15121 ttctgatgcg atacatcatc ccgccacctt tcaaaggtta accggctaaa cgcgccagca
    15181 acaattcacc cgcagaggaa accgcactca cgcgcgcctc acggccttgt gcctgataat
    15241 caatgtgtat ttcgacatcc gggtcaggaa gaacacctgt accttgttgt ggccactcca
    15301 ccaggcagat ggcatcgttg gcaaaataat cgcggatccc cataaactcc agctcctcgg
    15361 gatcggcaag gcggtacaaa tcaaagtgat aaaccattaa attgtcgagc gtatagggtt
    15421 cgaccagcgt ataagtgggg cttttgacat taccctgatg acccagagct tgtaaaaagc
    15481 cccggctaaa ggtggtttta cctgcgccta aatcgccata cagatagatt acggttgcgc
    15541 catcgcaggc tttcgctacc cgctcgccca ggtctaatgt tgcctgctca tcagggagcg
    15601 gaattactcg attcatcatg gtttttatca gtcacttccg ggttaacaat acgctgtagc
    15661 gtggaaaaga gatcggttgc cagcatcccg cgcgttccaa aacgcgccgc cagtacgtca
    15721 gctgacgcac cgtgtgcgac acagcccgca caggctgcat catacggcga cagtttttgc
    15781 ccaagcaatg cgccaataat accagagagc acatcgccca tgccgccgct cgccatgcct
    15841 gcatttccgg catcaataat gcctaaagcg tcaggatggg cggcgaccac ggttccggca
    15901 cctttcagca ccgctacgcc gccataacgt tgtaccagac gtttggcgca atgtaagcgg
    15961 tcactttcaa tttcagcgac ggaacagcct aacaaccgtg cggcctcgcc aggatgcggc
    16021 gtgatcacgc gattgtgacg cttatcggga ttgattgcca gcaggttcaa tgcatcggca
    16081 tcccacaaca tcggtttgcg aaaattctca actttttgca gggctttttt cccccactct
    16141 tgctggccca gaccgggacc aatcaccacc acatcggccc attccaggct ttcggtaaga
    16201 gagtccatcg tcagttcatg caccatcaat tccggtcgtg cagtcagcag cggcgcaatg
    16261 ttttcactgc gggtcagtac tcggactaaa ccagcaccag cacgcagcgc cgcttccccc
    16321 gtcatacgaa tagcccccgc cgtgccgtga tcgccaccga taattaccag ccgcccgtga
    16381 tcgcctttat gcgaagtcgg gcgacgcggt tttagccagt gagaaagttg ttctgccgaa
    16441 aaccgctgaa ttttcgtctc ctgacctgcc agccaactat ccagccccag tgggtcaaaa
    16501 tgcagttgtc cggtaacatc ccgcgctttt ccagtgagca agcctggttt cagcgcaata
    16561 aaagtgatgg tgtgatcggc gttgatcact gcgcctggcg tagcgccggt ttcagccagc
    16621 aggccggaag ggatatcaac cgccgcaatc ggcgcaggat gggaattagc gtggtcgatt
    16681 aactggctaa tggattcgcg gggcgcttgc tgcaagccgg taccgagcag cgcatcaaca
    16741 atcagatcta ccgattcggg ccagacaata ttcgaagcat ggatctcgcc acccgcgttt
    16801 aaccatgctt cgcgtgccag cgcggcctct tccggcaacg gtttgtcgct ctcctgggcc
    16861 aacaacgtga cctcaatgcc gaccgctttg gccagtcgcg cgaccacgta gccatcgccg
    16921 ccgttattac catgaccgca cagcaccagc cagtggcggg cgtcaggata cgccgaacga
    16981 cacacctgga atgcggcctc gccagcgcga agcatcagct catagagtgt gagccccagc
    17041 acatctgccg cctcgcgttc tccgcggcgg atatcgtcgg cgtaccagac ggtgtgtggt
    17101 atacttacgg gttttttctt cattgtatgg tccgtcatgt cagagcccct cgatctcaat
    17161 cagttagcgc aaaaaattaa acagtggggg ctggaactgg gctttcagca ggtaggtatt
    17221 accgataccg atctcagcga gtccgagccc aaactgcaag catggctgga caaacaatac
    17281 cacggcgaaa tggactggat ggcacgtcac ggtatgctgc gcgctcgccc tcatgagtta
    17341 ttgcccggta cgctgcgcgt gatcagcgtg cggatgaatt accttcctgc taacgccgca
    17401 tttgccagca cgctgaaaaa ccccaaactc ggctatgtta gccgttatgc gctgggccgt
    17461 gactatcaca aacttctgcg caaccgactc aaaaagctgg gcgagatgat tcagcaacat
    17521 tgtgtttcgc tgaattttag accgtttgtc gattctgcgc ctattctcga gcgcccgtta
    17581 gctgaaaaag ctgggctcgg ctggacaggt aagcactcac ttatcctcaa tcgcgaggcc
    17641 ggttcgttct tctttttagg cgaattgctg gtcgatattc cgctgcccgt ggatcaacca
    17701 gtcgaggaag gatgcggcaa atgcgtggcc tgtatgacga tttgcccgac cggtgccatc
    17761 gtcgagccat ataccgtcga tgctcgccgc tgtatctctt atctcaccat cgaacttgaa
    17821 ggggcgatcc cggaagagtt gcgaccgtta atgggaaacc gtatttacgg ttgcgatgac
    17881 tgccagctta tctgcccgtg gaatcgctat tcacaactca ccacagaaga ggatttcagc
    17941 ccgcgtaagc cgctacacgc accggaactc attgagttat tcgcctggag cgaagagaag
    18001 tttttaaaag tcacggaagg atcggcgatt cgtcgtattg gtcacctgcg ttggctgcgt
    18061 aatatcgccg tagcattagg caatgcccct tgggatgaaa cgattttgac agcgctggaa
    18121 agtcgtaaag gtgagcaccc acttctcgat gagcacatag cgtgggcgat tgcgcagcaa
    18181 atagagagac gaaatgcgtg catagtcgaa gtgcaattgc cgaaaaaaca gcatctggtt
    18241 cgggtgattg aaaaagggtt accgcgtgac gcctgattca tccacagctt gtgaataaaa
    18301 ataaaaacgc attgcaattc aagacgaata aaatcgtcaa gtgatcgact cgacaaaacg
    18361 gaatcttaat ttttaactta tctatcaata ggttaaaaaa tactattcac cgtgcgaagt
    18421 ttctttgaaa ttaagattac agcctgaggc tgtggataac tctgtttaca agagtttgtc
    18481 agagacaacg aaaaccagca ataacgcatc gcatcgctgt ggatatttta ttgagagaag
    18541 aatttggagc gggaaacgag actcgaactc gcgaccccga ccttggcaag gtcgtgctct
    18601 accaactgag ctattcccgc ttgggtggtc tgtgccttac agcactttca aattttggag
    18661 cgggaaacga gactcgaact cgcgaccccg accttggcaa ggtcgtgctc taccaactga
    18721 gctattcccg cttgggtggt ctgtgctttg cagcactttt caaattttgg agcgggaaac
    18781 gagactcgaa ctcgcgaccc cgaccttggc aaggtcgtgc tctaccaact gagctattcc
    18841 cgcgtactac ttaattttgc tttcgtaatt ttcgcatttc tgcgtcgtta cgggaggcgc
    18901 attatacgag aaatctttcc ctctgcaacc ccccaaaaaa gttttttttg cgtttttatc
    18961 tcaagtgctg aaattatcag caagacgttc aatttagcgt caaaatcacg ccgccgcaag
    19021 tggattccgg cgcttacgtg accaggaaaa attttacagc ttgataaaat gctcgcggta
    19081 gtaagccagc tccgccaccg attcacggat atcatccatc gcctgatgcg tcccctgctt
    19141 ggtaaaacca tccagaattt ccggcttcca gcggcgcgcc agctctttca gggtgctgac
    19201 atcgagataa cggtagtgga agtaggcttc cagctccggc atgtatttaa acaggaaacg
    19261 acggtcctgt ccgatgctgt taccgcaaat cggcgatttt cccgcaggca cccactgttt
    19321 taagaattcg agcgttacca gttcagcttc ccgatcgccc atcgtgctcg ctttcacgcg
    19381 ttctaccagc ccgctggcgg tatgggtgcg cacgttccag tcatccatca gcgccaactg
    19441 ttcatcggac tgatgtactg caatggtcgg cccttctgcc agaatattca ggttggcatc
    19501 ggtcaccagc gtggcaatct caataatgcg atcgagctcg ggatccagac cagtcatctc
    19561 aagatcgatc caaatcaggt tgttttcatt ggcactcatg ctattttcca cccattcaca
    19621 gtgactatat tgatccacaa ttgcgtgtat catagatgtt ttgcccatca ggggcgacca
    19681 ggagtctgta cgattgagta aaaataaact ctccaaaggc cagcagcgcc gcgtgaacgc
    19741 caatcaccag cgtcgtctta aaacgtctaa ggagaagccc gactacgacg acaatctgtt
    19801 tggcgagcct gatgaaggta tcgtcatcag ccgctttggt atgcacgctg atgtggaatc
    19861 cgccgatggc gacgttcacc gctgcaatat tcgccgtacc atccgttcgc tggtaaccgg
    19921 cgaccgcgta gtctggcgtc cgggtaaacc ggcggcggaa ggcgtaaatg tcaaagggat
    19981 cgtggaagcg gtacatgagc gcacctcggt gttgacgcgt ccggatttct acgacggcgt
    20041 gaaacctatt gccgccaaca tcgaccagat tgtcattgtc tccgccattt tgccggagct
    20101 gtcactcaat attatcgacc gttacctggt ggcctgcgaa accttgcaga ttgagccgat
    20161 tattgtgctc aacaagatag acctgctgga cgacgaaggc atggcgttcg tcaacgaaca
    20221 gatggatatc taccgcaata tcggttatcg cgtattgatg gtttccagcc atactcagga
    20281 tgggctaaaa acgctggaag aggcgttgac cgggcgcatc agcatttttg ccgggcagtc
    20341 tggcgttggt aaatccagcc tgctgaacgc gttgctgggg ctgcaaaaag agatcctgac
    20401 caacgatgtc tctgacaact cggggcttgg tcagcacacc acgaccgccg ctcggctgta
    20461 tcacttcccg cacggcggtg atgtgattga ctccccagga gtgcgtgagt tcggcctctg
    20521 gcacctggag ccggaacaaa tcactcaggg ctttgtcgaa ttccatgact atttaggtct
    20581 gtgtaaatat cgcgattgca aacacgatac cgatccgggc tgcgctatcc gggaagcggt
    20641 tgaggaaggg aaaatcgcgg aaacccgttt cgaaaactat caccgtattc tggaaagcat
    20701 ggcgcaggta aaaacgcgta aaaacttttc tgatacggat gactgacaat taagctaacc
    20761 gtcgttagaa tcgtcccttt ttttcaggat ccggcatgta ggccggatca ggaacgacaa
    20821 aacaatggcc tggaggctac cttgttaaat tcatttaaac tttcgctaca gtacattctg
    20881 ccgaaactat ggcttactcg cctggcgggt tggggcgcaa gcaagcgggc aggatggctg
    20941 acaaaactgg ttatcgatct gttcgttaaa tactacaagg tcgacatgaa agaggcgcaa
    21001 aagccggaca ccgccagcta ccgcaccttt aacgaattct ttgtccgtcc gctgcgtgac
    21061 gaagtacgcc caatcgatac cgatccgaat gtactggtca tgcctgccga tggcgttatc
    21121 agccagttgg gtaaaatcga agaagataaa atcctgcaag ccaaaggcca caactacagc
    21181 ctcgaagccc tgctggcagg taactacctg atggcggacc tgttccgcaa cggtacgttt
    21241 gtgaccactt acctctcccc gcgtgactac caccgcgtac acatgccgtg caacggtatt
    21301 ctgcgtgaga tgatctacgt gccgggcgat ctcttttccg ttaaccatct caccgctcag
    21361 aacgtgccga atctatttgc ccgtaacgaa cgcgtgatct gcctgttcga taccgaattt
    21421 ggcccaatgg cgcagattct ggtcggtgcg acgattgtag gcagcattga gactgtctgg
    21481 gcgggcacca ttacgccgcc gcgcgaaggc atcatcaagc gctggacctg gcctgccggg
    21541 gaaaacgacg gttctgtggc actgctgaaa ggccaggaaa tgggtcgctt taaactcggt
    21601 tccaccgtta tcaacctgtt tgcaccaggt aaagtgaatc tggttgagca actggaaagc
    21661 ctgtctgtca cgaaaattgg ccagccgctg gcagtatcta ccgaaacctt tgttacgcca
    21721 gacgctgaac ccgccccgct tcctgctgaa gagatcgaag cagaacacga cgccagccca
    21781 ttggttgacg ataaaaaaga ccaagtctaa tccatcaaag gaaacgctga cgtgcgcctg
    21841 attatcactt ttctgatggc ctggtgcctc agttgggggg cgtacgccgc gacggccccc
    21901 gatagcaaac aaatcactca ggaactggag caggcaaaag cggcgaaacc cgcgcagcca
    21961 gaaatcatag aggcgctcca gtctgcctta aatgcgcttg aggaacgaaa aggttccctt
    22021 gagcgcatca agcaatatca agaagtcatt gataattacc cgaaactctc cgctactctg
    22081 cgcgcacaat taaacaacat gcgtgacgag ccgcgcagcg tgtcgccggg gatgtctacc
    22141 gacgcgctga atcaggaaat tctccaggtc agcagccaat tgctggataa aagccgtcag
    22201 gcccagcaag agcaggagcg cgcccgcgag attgccgatt cgctgaatca actgccgcaa
    22261 cagcaaaccg acgcccgccg tcagttaaat gagatcgagc gccgcctggg aacgcttact
    22321 ggcaataccc cgctcaatca ggcacaaaat ttcgcgttgc agtctgactc cgcacgcctg
    22381 aaagcgctcg ttgatgaact ggaactggcg cagctgtctg ccaataaccg tcaggaatta
    22441 gcgcgcttgc gctcagagct ggcggaaaaa gagagccagc aactggatgc gtatttgcag
    22501 gccttacgta atcagttgaa tagccaacgt cagcttgagg cggagcgggc gctggaaagt
    22561 accgaattac tggcagaaaa cagtgccgat ttgccgaaag atatcgtcgc gcaattcaaa
    22621 attaaccgcg aactatcggc agcgctgaat caacaggcgc agcggatgga tctcgttgcc
    22681 tcgcaacagc gccaggccac cagccagacg ttacaggttc ggcaggcgct gaatacgctg
    22741 cgtgaacagt cgcaatggct gggatcgtcc aacctgctcg gcgaagcgtt gcgggcgcag
    22801 gtggcacggc tgccggaaat gccgaaacca caacagcttg ataccgaaat ggcgcagttg
    22861 cgtgtgcaac ggttacgtta tgaggatctg cttaataaac agccgctgct acggcaaatt
    22921 catcaggccg acggtcagcc gctgaccgcc gagcaaaacc gtattctgga agcacagcta
    22981 cgcactcagc gtgagttgct gaactcattg ttgcagggtg gagacacgct actactggaa
    23041 ctgaccaagc tgaaagtctc caacgggcaa ctggaggatg cgctgaaaga ggtgaacgaa
    23101 gcaacgcacc gctatctgtt ctggacctct gacgtgcgcc cgatgactat cgcctggcca
    23161 ctggaaatcg cccaggatct gcgtcgtctc atttcgctgg acaccttcag tcagttgggc
    23221 aaagccagtg tgatgatgct gaccagcaaa gagacaattt tgccgctgtt tggcgcgttg
    23281 attctggtcg gttgcagtat ttactcgcgc cgctatttca cccgttttct tgaacgttcg
    23341 gcggcgaaag tcggtaaagt gactcaggat cacttctggc tgacgttacg cactcttttc
    23401 tggtcgattc tcgtcgcgtc accgctgccg gtgctgtgga tgacgctggg ttacggcttg
    23461 cgcgaggcgt ggccttatcc gctggcggtc gcgattggtg atggcgtcac agccaccgtg
    23521 ccgctgctgt gggtagtgat gatttgcgct acctttgccc gcccgaacgg cttgtttatc
    23581 gctcattttg gctggccgcg cgaacgtgtt tctcgtggga tgcgctacta cctgatgagc
    23641 atcgggctta ttgtgcccct gattatggcg ctgatgatgt tcgataatct cgacgaccgc
    23701 gaattttccg gttcgctggg acggctttgc tttatcctca tttgcggtgc gctggcggtg
    23761 gtcaccctca gcctgaaaaa ggccgggatc ccgctgtatc tcaacaaaga aggcagcggc
    23821 gacaacatta ccaaccatat gctgtggaac atgatgattg gcgcgccgtt ggtcaccatt
    23881 ctggcgtcgg cggtgggtta tctggcaacg gcgcaggcac tgttagcgag gcttgaaacc
    23941 tcggttgcca tctggttcct gctactggtg gtttatcacg ttatccgccg ctggatgctg
    24001 atccagcgcc gcaggctggc gtttgaccgg gcgaagcatc gccgggcaga gatgttagcg
    24061 caacgtgcgc gtggcgaaga ggaagcgcat catcacagta gcccggaagg agcaattgaa
    24121 gtcgatgaaa gcgaagtcga tctcgatgcc atcagtgcgc aatccttgcg gctggtgcgc
    24181 tcaattttga tgttgatcgc cctgctttct gtcattgtgc tgtggtcaga aatccattcc
    24241 gctttcggct tcctcgaaaa tatttcgctg tgggatgtca cctccacggt acagggcgta
    24301 gaaagtctgg agccaattac cctcggtgcg gtgctgattg ccattctggt gtttatcatc
    24361 accacgcagc tggtgcgcaa cctgcccgcg ctgctggaac tggcgatttt gcagcacctg
    24421 gatttaacgc cgggtacggg ttacgccatc accaccatca ccaaatatct gctgatgctg
    24481 attggcgggc tggtcggctt ctcaatgatt ggtattgagt ggtcgaaatt gcagtggctg
    24541 gttgccgcgc tcggtgttgg tctcggtttt ggtttgcagg aaattttcgc caactttatc
    24601 tctggcctga tcatcctgtt cgaaaaaccg attcgcattg gcgatacggt aacgatccgc
    24661 gatcttactg gtagcgtgac aaaaattaac acccgcgcca ctacaatcag cgactgggac
    24721 cgtaaagaga taatcgtgcc gaacaaggcg tttattaccg agcagtttat caactggtcg
    24781 ctctctgact cggtcacgcg cgtggtgttg acgattccgg cccctgccga tgccaatagc
    24841 gaagaagtga cggaaatcct gctcaccgca gcgcgtcgct gctcgctggt gatcgacaac
    24901 ccggcaccgg aagtcttcct ggtggatctg caacagggga ttcagatttt cgagctgcgt
    24961 atttacgccg ctgagatggg tcaccgtatg ccgctacgcc atgagatcca ccagctgatt
    25021 ctggcaggct tccacgccca cggtatcgat atgccattcc cgcccttcca gatgcgtctg
    25081 gaaagcctca acggtaaaca aacggggaga acgctgacgt ctgcgggcaa aggtcgtcag
    25141 gcgggaagtt tgtaatgcat gaagctgcca aatgatgtca acgtggctca tttagcagct
    25201 taacatcatc ttcagttatc accggccctg gagagtatca tccatacgca ttacttcctg
    25261 acaactcatc gccggagaga cgatgagttg caggatttca tatgatcagt cgagagctaa
    25321 ctcaggttta ttcgccatgc gactgcaata gttctggtaa atcgccatcg ctaacagcga
    25381 gaagaagaca gggccgccaa tcatccacaa tgtgctgtcc cagtctccgg cttcaaccac
    25441 aggttgaatg atggtgaaga cgttcgcaaa tgtcaccacc agaacgacaa ccaccgtcgc
    25501 aatcattgcc gacatacgcg ttttgaaaat cacaaatggt ctgtcgagat cctgacgtgc
    25561 tttaaagaat gggaaagcca gcgcgaggaa caggtaagga agcgtcatag acacgttcgc
    25621 catcagcgtc agcttgttaa agaacgccga tgcggtaccg ccaccaaacg aaaccagcag
    25681 aatgaagata gtaaccaacc cgcactgcat ccacatggcg atagacggca tccccatcgc
    25741 attcaggcgc gtcatcggtt ccggccacaa cgctttcggc gtcccctgga tgatggcttt
    25801 cagcggtgaa tagcaaagcg taaagaacgc cccggtataa gcgaggaaca tcgaaagtcc
    25861 agtaatacgc gcaaaccata cacccagcga caatgacgct tcaggtgaca aatgcagtgc
    25921 gttacccagc gtcaccccga ggctcttcat cagcacatag gtaatattgc cgaggttaac
    25981 ggaaccatta cttaatacct gctgccagtt tgtgctgact ccccataaaa atattgctag
    26041 cgaataaccg attgaaataa caatagcggc aaaaacaata cctttggcaa agttcttttc
    26101 tggattttcc gttttatcga ccagaccacc aaccgcttca attccgccat aggcaaaaat
    26161 agcaaatacc acaaacgata gcattgccag accggactga taacctgggt tcggtgatgc
    26221 aaggaaatta atatcctgtg cgaaatgccc accatttaat aacaaaatag taatgcttac
    26281 taacagcaat actaaattca gacacattac tgcaataccg cccaccgcag taatgcgggc
    26341 aattttatta atcccctttg aagcaacgac ggtgaccaga atcatccatg ccactgccag
    26401 cagaccaacc acctgcgtag gctccagtcc ggcaatacgc cagtgctggg tcatgtcgct
    26461 accatagagg aatgttgaga acggtaccca aactttcgcg gaggtactca ccatccagat
    26521 gatataagag gaaaaccaca taaacgtacc aatgaaggca aaacgtggtc cgacactatt
    26581 attcatccag gaatagatac cgccttcttc tttgcgataa gcagctccca tttcagccat
    26641 cattaaggcg aatggaataa agaataacaa tgcagaaaat atataaaagg gaatcgcact
    26701 ataacccatt aagtaataag ctgatgggct attggcaaat ccaaatacgg aagtaaagat
    26761 catcaatatg agtcctatca gactcatctt ttttatcatg tgaggcatga aaccatcctt
    26821 catttcagcg cgtgtataaa acgcgcccac tgaactctga gggatccc
//
LOCUS       DAJVTL010000055        26446 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.055, whole genome shotgun sequence.
ACCESSION   DAJVTL010000055 DAJVTL010000000
VERSION     DAJVTL010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26446
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.055"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..337
                     /locus_tag="OQQ26_002162"
     CDS             <1..337
                     /locus_tag="OQQ26_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2491 family protein"
                     /protein_id="HCS1857609.1"
                     /translation="KESHWREAINAKTMGAMTLNWQEKRWQRFFNSEEPGNIEPVYML
                     EKVENQNHAKWEIHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDI
                     PLTSLHIIG"
     gene            355..753
                     /locus_tag="OQQ26_002163"
     CDS             355..753
                     /locus_tag="OQQ26_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HCS1857610.1"
                     /translation="MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITLHNEWQLIKNNN
                     TAASLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSE
                     KIINHNTAAGMFMGTAALAGGIFNAACMTW"
     gene            763..1401
                     /locus_tag="OQQ26_002164"
     CDS             763..1401
                     /locus_tag="OQQ26_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HCS1857611.1"
                     /translation="MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLAL
                     MGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADV
                     PKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEQFVYNSGGSSFASR
                     PVWRNTSGDYSWRSGSGKKESYSSGGFTTRKASTVSRGGYGRSSSARGHWGG"
     gene            1404..2567
                     /locus_tag="OQQ26_002165"
     CDS             1404..2567
                     /locus_tag="OQQ26_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710049.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HCS1857612.1"
                     /translation="MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRM
                     DFAWCGNAPVKLLEYNADTPTSLYESAYFPWLWLEDARRSGIIPRDADQYNAIQERLI
                     SRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLT
                     DLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFP
                     GHPNLLASWFEGEKSQIAAGESYVRKPIYSREGGNVTIFDGQNNVVDHADGDYADEPM
                     IYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG"
     gene            2651..4276
                     /locus_tag="OQQ26_002166"
     CDS             2651..4276
                     /locus_tag="OQQ26_002166"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418608.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HCS1857613.1"
                     /translation="MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLA
                     SIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHN
                     LAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPL
                     LSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS
                     VPQSDAHLVLAQTAGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDA
                     IGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQ
                     PLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPF
                     VAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLS
                     EAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQ
                     AWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCL"
     gene            complement(4393..4668)
                     /gene="yjfN"
                     /locus_tag="OQQ26_002167"
     CDS             complement(4393..4668)
                     /gene="yjfN"
                     /locus_tag="OQQ26_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease activator YjfN"
                     /protein_id="HCS1857614.1"
                     /translation="MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVS
                     NISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA"
     gene            complement(4817..5146)
                     /gene="bsmA"
                     /locus_tag="OQQ26_002168"
     CDS             complement(4817..5146)
                     /gene="bsmA"
                     /locus_tag="OQQ26_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313192.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HCS1857615.1"
                     /translation="MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQE
                     IRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYS
                     QAILYRK"
     gene            5328..6077
                     /gene="yjfP"
                     /locus_tag="OQQ26_002169"
     CDS             5328..6077
                     /gene="yjfP"
                     /locus_tag="OQQ26_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HCS1857616.1"
                     /translation="MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYS
                     YFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEEN
                     WLLDDRLAVGGASMGAMTALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAA
                     QQNEFNNIVAPLAEWEATNHLEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETERD
                     KLLTCSWQPGVRHRITPETLDAAVTFFLQHL"
     gene            complement(6074..6829)
                     /gene="ulaR"
                     /locus_tag="OQQ26_002170"
     CDS             complement(6074..6829)
                     /gene="ulaR"
                     /locus_tag="OQQ26_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HCS1857617.1"
                     /translation="MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLF
                     SRADQIDMLITGKNANPEILQQLEAQGVSILRV"
     gene            complement(6937..8001)
                     /gene="ulaG"
                     /locus_tag="OQQ26_002171"
     CDS             complement(6937..8001)
                     /gene="ulaG"
                     /locus_tag="OQQ26_002171"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HCS1857618.1"
                     /translation="MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG
                     GSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKV
                     VIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            8356..9753
                     /gene="ulaA"
                     /locus_tag="OQQ26_002172"
     CDS             8356..9753
                     /gene="ulaA"
                     /locus_tag="OQQ26_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HCS1857619.1"
                     /translation="MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKG
                     TIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYS
                     WVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTMFIFGYSMWTTII
                     CTAIMVSLYWGITSNMMYKPTQIVTDGCGFSIGHQQQFAAWIAYKVAPFLGKKEESVE
                     DLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSF
                     AVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGT
                     IGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEI
                     FGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRAL
                     RAEEDAEKQLAEQSA"
     gene            9769..10074
                     /gene="ulaB"
                     /locus_tag="OQQ26_002173"
     CDS             9769..10074
                     /gene="ulaB"
                     /locus_tag="OQQ26_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
                     /protein_id="HCS1857620.1"
                     /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
                     KSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKEHFPQDVK"
     gene            10084..10548
                     /gene="ulaC"
                     /locus_tag="OQQ26_002174"
     CDS             10084..10548
                     /gene="ulaC"
                     /locus_tag="OQQ26_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HCS1857621.1"
                     /translation="MKLRDSLAENKSIRLQAEANTWQEAVKIGVDLLVAVDVVEPRYY
                     QAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGFSLVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA"
     gene            10562..11212
                     /gene="ulaD"
                     /locus_tag="OQQ26_002175"
     CDS             10562..11212
                     /gene="ulaD"
                     /locus_tag="OQQ26_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HCS1857622.1"
                     /translation="MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGV
                     RAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVA
                     KEFNGDVQIELTGYWTWEQAQQWRDAGIQQVVYHRSRDAQAAGVAWGEADITAIKRLS
                     DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG"
     gene            11222..12076
                     /gene="ulaE"
                     /locus_tag="OQQ26_002176"
     CDS             11222..12076
                     /gene="ulaE"
                     /locus_tag="OQQ26_002176"
                     /EC_number="5.1.3.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase UlaE"
                     /protein_id="HCS1857623.1"
                     /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
                     ERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
                     IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
                     LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPG
                     VFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMA
                     KAGMVEAA"
     gene            12076..12762
                     /gene="ulaF"
                     /locus_tag="OQQ26_002177"
     CDS             12076..12762
                     /gene="ulaF"
                     /locus_tag="OQQ26_002177"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710063.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase UlaF"
                     /protein_id="HCS1857624.1"
                     /translation="MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKADDMVVVDMSGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAW
                     AQAGLAIPALGTTHADYFFGDIPCTRGLREEEVQGEYELNTGKVIIETLGNAEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSYLMNKHFMRK
                     HGPNAYYGQK"
     gene            12857..13408
                     /locus_tag="OQQ26_002178"
                     /pseudo
     CDS             12857..13408
                     /locus_tag="OQQ26_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996729.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
     gene            complement(13483..13758)
                     /locus_tag="OQQ26_002179"
     CDS             complement(13483..13758)
                     /locus_tag="OQQ26_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCS1857625.1"
                     /translation="MFSRVLALLAVLLLSANTWAAIEINNHQSRNMDDVQSLSVIYIN
                     HNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR"
     gene            14085..14480
                     /gene="rpsF"
                     /locus_tag="OQQ26_002180"
     CDS             14085..14480
                     /gene="rpsF"
                     /locus_tag="OQQ26_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HCS1857626.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            14487..14801
                     /gene="priB"
                     /locus_tag="OQQ26_002181"
     CDS             14487..14801
                     /gene="priB"
                     /locus_tag="OQQ26_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HCS1857627.1"
                     /translation="MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRIVVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            14806..15033
                     /gene="rpsR"
                     /locus_tag="OQQ26_002182"
     CDS             14806..15033
                     /gene="rpsR"
                     /locus_tag="OQQ26_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HCS1857628.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            15075..15524
                     /gene="rplI"
                     /locus_tag="OQQ26_002183"
     CDS             15075..15524
                     /gene="rplI"
                     /locus_tag="OQQ26_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HCS1857629.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNI
                     EFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE"
     gene            complement(15595..16389)
                     /locus_tag="OQQ26_002184"
     CDS             complement(15595..16389)
                     /locus_tag="OQQ26_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HCS1857630.1"
                     /translation="MTLPTTIYSFPAYLPRFSSTDKPAKLKFHQYARATLLPNRGRDH
                     NCDGRRTVEIHKLDLSDWQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKY
                     NKAYAGARLTAELKYSLQDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPA
                     QMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLHSLSSS
                     AAIYSVLGFERVPQERDISCARMYLTPANHPDLWTQENGEWIYLRN"
     gene            16662..17063
                     /locus_tag="OQQ26_002185"
                     /pseudo
     CDS             16662..17063
                     /locus_tag="OQQ26_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709992.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
     gene            complement(17047..17685)
                     /gene="ytfB"
                     /locus_tag="OQQ26_002186"
     CDS             complement(17047..17685)
                     /gene="ytfB"
                     /locus_tag="OQQ26_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YtfB"
                     /protein_id="HCS1857631.1"
                     /translation="MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVV
                     GFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQ
                     EGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVDPGKTMAQLFRDHGLPATDVYAMAQVE
                     GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR"
     gene            17904..18524
                     /gene="fklB"
                     /locus_tag="OQQ26_002187"
     CDS             17904..18524
                     /gene="fklB"
                     /locus_tag="OQQ26_002187"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015742582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCS1857632.1"
                     /translation="MTTPTFDTIEAQASYGIGLQVGQQLSESGLQGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTES
                     GLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
     gene            18832..20244
                     /gene="cycA"
                     /locus_tag="OQQ26_002188"
                     /gene_synonym="dagA"
     CDS             18832..20244
                     /gene="cycA"
                     /locus_tag="OQQ26_002188"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HCS1857633.1"
                     /translation="MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEM
                     EFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGF
                     QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWF
                     IALGLGWLFIGKKRAAELRK"
     gene            complement(20289..20951)
                     /gene="ytfE"
                     /locus_tag="OQQ26_002189"
     CDS             complement(20289..20951)
                     /gene="ytfE"
                     /locus_tag="OQQ26_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HCS1857634.1"
                     /translation="MAYRDQPLGELALSIPHASALFRKYDMDYCCGGKQTLARAAARK
                     ELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVE
                     RVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEH
                     DEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPHALA
                     GE"
     gene            complement(21059..22024)
                     /locus_tag="OQQ26_002190"
     CDS             complement(21059..22024)
                     /locus_tag="OQQ26_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709987.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1857635.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLI
                     ALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLP
                     VVIPVFANLLYSQRDGKLAWGKLAPALICIGIGLACVNIAELNHGLPDFDWARYTSGI
                     VLALVSVVCWTWYALRNARWLRENPDKNPMMWATAQALVTLPVSLIGYLVACYWLNIQ
                     TPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNIASQRLPTVILGPLIVFETLAGL
                     LYTFLLRQQMPPLMTLSGIALLVIGVVIAVRAKPEKPLTESVSES"
     gene            complement(22133..22993)
                     /gene="qorB"
                     /locus_tag="OQQ26_002191"
     CDS             complement(22133..22993)
                     /gene="qorB"
                     /locus_tag="OQQ26_002191"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001491469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HCS1857636.1"
                     /translation="MIAITGATGQLGHYIIESLMKTVPASQIVAIVRNPAKAQALTAQ
                     GITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKTAGVKFIAYT
                     SLLHADKSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA
                     AGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKSVT
                     YQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDNSKTLSKLIGRPTTTLAE
                     SVSHLFNVNK"
     gene            23082..23462
                     /locus_tag="OQQ26_002192"
     CDS             23082..23462
                     /locus_tag="OQQ26_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HCS1857637.1"
                     /translation="MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGMLILVALREG
                     THRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEK
                     VAALADWIELNLPEVLAVRDERAA"
     gene            complement(23580..25523)
                     /gene="cpdB"
                     /locus_tag="OQQ26_002193"
     CDS             complement(23580..25523)
                     /gene="cpdB"
                     /locus_tag="OQQ26_002193"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HCS1857638.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDVHPVYK
                     ALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
                     EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGAD
                     VVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIT
                     KGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAED
                     SKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKAS
                     GKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYD
                     GECQMVNANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDE
                     NRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKG
                     QYPMNKVATDDIGFAIYQVDLSK"
     gene            25713..>26446
                     /gene="cysQ"
                     /locus_tag="OQQ26_002194"
     CDS             25713..>26446
                     /gene="cysQ"
                     /locus_tag="OQQ26_002194"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HCS1857639.1"
                     /translation="MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAA
                     HTVIMDGLRTLAPDIPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKLIQVRDARPPLVVISRSHAD
                     AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGA
                     HVHDWQGKPLDYTPRESFLNPGFRVS"
BASE COUNT         6199 a         6455 c         6990 g         6802 t
ORIGIN      
        1 taaagagagt cactggcgcg aggcgatcaa cgccaaaacg atgggggcaa tgaccttaaa
       61 ctggcaggaa aaacgctggc agcgattttt taacagcgaa gaaccgggaa atatcgaacc
      121 cgtctacatg ctggaaaaag tagaaaatca aaatcatgct aaatgggaaa tccataattt
      181 taccatgggc taccagcggc aagtgaccga agatacttac gaatatttgc tgctaaatgg
      241 tgaggaatct tttaacgatc tcggcgagcc agagtggtta ttttcgcgcg cgttgggtgt
      301 cgatatcccg ctgacatcac ttcatattat tggttaatta caaggacgtt tacaatgcat
      361 atactggatt cacttcttgc ctttagtgcc tattttttta ttggcgtggc tatggtgatt
      421 atttttctgt ttatctactc caaaattaca ctgcacaacg aatggcaatt aatcaaaaac
      481 aataataccg cggcgtcact ggcattcagc ggtacattgt tgggttacgt gatcccctta
      541 tccagtgcgg caatcaatgc ggtgagtatt ccagactatt tcgcctgggg cgggattgca
      601 ctggtgattc agttactcgt ttttgctggt gtcaggcttt atatgcccgc attaagcgaa
      661 aaaattatta atcacaatac cgcagcagga atgtttatgg gaaccgccgc gctggctggc
      721 ggtattttta acgcagcttg tatgacatgg taatggacga tcatggccag aaaacgcaaa
      781 tcaagaaata acagtaaaat tggtcacgga gcgatcagtc gcattggtag accgaataat
      841 ccttttgaac cgcgtcgcaa tcgctacgca caaaaatact taacgttggc gctaatgggc
      901 ggtgccgctt ttttcgtatt gaaaggttgt agcgatagta gcgatgtcga taacgacggc
      961 gacggaacgt tttacgcgac agtgcaggat tgtattgatg acggtaataa tgccgacatt
     1021 tgcgcgcgtg gctggaacaa cgccaaaacg gcattttatg ccgatgttcc gaagaatatg
     1081 actcagcaga attgtcagtc taagtatgaa aattgttact acgacaacgt tgaacagagt
     1141 tggatcccgg tcgtttctgg atttttgtta agccgggtta ttcgtaaaga tcgcgatgag
     1201 cagtttgttt ataacagcgg cggttcctct tttgcttcgc gccccgtctg gcgcaacact
     1261 tctggtgatt actcctggcg ctccggttct ggcaaaaaag agtcttactc ttcaggcggc
     1321 tttaccacca gaaaagcgtc gaccgtttcg cgcggcggct atggtcgttc ttccagcgcc
     1381 cgtgggcatt ggggaggcta atcatgctga gacacaacgt tcctgtgcgg cgggatctgg
     1441 accagatcgc cgctaacaac ggtttcgact ttcatatcat cgacaatgaa atctattggg
     1501 acgagagtcg ggcttaccgt tttactctgc gccagattga agagcagatc gaaaaaccga
     1561 ctgcggaact gcatcagatg tgccttgagg tggtggatcg cgcggttaaa gacgaagaga
     1621 tcctgacgca actggcgatc ccgccgttgt actgggatgt gatcgccgaa agctggcgcg
     1681 cacgcgatcc ttcgctgtat ggccggatgg attttgcctg gtgtggcaat gcgccggtga
     1741 agctgctgga gtacaacgcc gatacgccga cctcgttgta tgagtcggct tatttcccgt
     1801 ggttgtggct ggaggatgcc cggcgcagcg gcattattcc gcgtgatgcc gatcagtaca
     1861 acgccattca ggaacgcctg atttcgcgct ttagtgagct ttacagtcgg gaaccgtttt
     1921 atttttgctg ctgtcaggac acagatgaag acaggagtac cgtgctgtac ttgcaggact
     1981 gcgcccagca ggcagggcag gagtcgcggt ttatctacat tgaagatctc ggtttgggcg
     2041 tcggcggcgt actgaccgat cttgatgata atgtcatcca gcgtgcattt aagctgtatc
     2101 cgctggagtg gatgatgcgt gacgataacg gtccgctgct gcgcaagcgt cgcgagcaat
     2161 gggtggagcc gttatggaaa agtatcttga gtaataaagg gctaatgccg ctgctttggc
     2221 gcttcttccc tggtcatcct aaccttcttg catcctggtt tgagggtgaa aaatcgcaga
     2281 ttgccgctgg cgaaagctat gtgcgtaaac cgatctactc gcgcgaaggc ggaaacgtca
     2341 ccattttcga cggtcagaat aacgtcgttg accacgctga tggtgattac gccgatgaac
     2401 cgatgatcta ccaggcgttt caacctctgc cgcgatttgg cgatagctac acactcatcg
     2461 gtagctggat tgtcgatgat gaagcgtgcg gaatggggat ccgtgaagat aacacactga
     2521 tcaccaaaga cacctcacgt ttcgttccgc attacattgc tggataagaa tgttttagca
     2581 atctctttct gtcatgaatc catggcagtg accatactaa tggtgactgc cattgatgga
     2641 gggagacaca gtgcactggc aaactcacac cgtttttaat caacctatac cattaaataa
     2701 cagcaactta tacctgtctg atggcgcgct ttgcgaagcg gtaacgcgtg aaggtgctgg
     2761 ctgggatagc gattttctag ccagtattgg tcagcagtta ggaacggctg aatcccttga
     2821 actggggcgg ctggcgaatg taaacccgcc tgaactgttg cgctacgatg cccaggggcg
     2881 gcgtctggac gatgttcgtt tccatcccgc atggcacctg ctgatgcagg cgttatgtac
     2941 caatcgggtg cacaatcttg cctgggaaga agacgctcgc tccggcgcat ttgtggcgcg
     3001 cgcggcgcgt tttatgttac atgcgcaggt tgaggctggg tcgttatgtc caataacgat
     3061 gacctttgcc gccacgccat tgttgttaca gatgttaccc acgccgtttc aggactggac
     3121 cacgccgctg ctgagcgatc gctacgattc tcacttattg ccaggtgggc aaaaacgcgg
     3181 tttgttgatt ggcatgggaa tgacggaaaa gcagggcggt tccgatgtca tgagcaacac
     3241 cacccgtgca gagcgtttgg aagatggctc ttatcggctg gtggggcata aatggttttt
     3301 ctcggtgccg caaagcgatg cgcatctggt gctggcgcag accgcgggcg gtctgtcctg
     3361 cttttttgtg ccgcgctttt tgcctgacgg gcaacgcaac gcgattcgcc tcgagcggct
     3421 gaaagataag ctgggtaatc gctctaacgc cagttgcgaa gtggagtttc aggatgccat
     3481 tggctggtta ttggggcagg aaggggaagg aattcgtctg atcctgaaaa tgggggggat
     3541 gacgcgtttt gattgcgccc tgggtagcca tgccatgatg cgccgtgcat tttcgctggc
     3601 gatttatcat gcacatcaac gccatgtttt tggtaatcca ttgatccaac agccccttat
     3661 gcgtcatgtc ttaagtcgca tggcacttca gcttgaaggg caaacggcgt tgctgtttcg
     3721 tcttgcgcga gcgtgggacc ggcgtgccga tgccaaagaa gccctgtggg cgcgtttatt
     3781 tacgcctgcg gcaaaatttg tgatctgcaa acgaggtatg ccgtttgtgg ccgaagcgat
     3841 ggaggtgctg ggcggcattg gttattgcga ggagagcgag ctgccgcggc tttaccggga
     3901 gatgccggta aacagcattt gggaaggttc cggcaatatt atgtgcctgg atgtgttgcg
     3961 cgttctcaat aagcaagcgg gcgtatacga cttattgtcg gaagcatttg tggaagtgaa
     4021 agggcaggat cgctattttg atcgcgcggt tcgtcgttta cagcagcagc tgcgtaagcc
     4081 agctgaagaa ctggggcgag agattactca tcagctattc ctgctgggct gcggtgcgca
     4141 aatgttgaaa tatgcctctc cgccaatggc gcaggcgtgg tgtcaggtga tgttagatac
     4201 gcgcggcggc gtacggttgt cagagcagat ccagaatgat ttattgctgc gggcgacggg
     4261 gggagtgtgt ttgtaagcgt atacgactga tgcgacgctg gtttcgatta actcaatgaa
     4321 atatgtgaaa attgcaggcc ggacaaggcg ctcgcgccgc atccggcatt gttcatttgc
     4381 tgtagatgac actcatgcat acaggatcgc ctgtacgcgc cagttatcag gctgctggtc
     4441 ttcgtacatg gtaataatgc ggtaccatga cgcaccttgt tcatcggcct ttaacgccac
     4501 gatacgttcc acgtcctgcg gatcccctga aatattgcta actgagatct gacctatttc
     4561 attcaggccc gtcacgcagt cagcactggc gaattctgca gactgtgccg tggcgctcgc
     4621 aggataagtc actaattgca gcgagggtga ggcaagtaat tgtttcatcg tcagctccat
     4681 ttttcgtttc cccatatgtt gcagggcatt ccatcgcggt aataaacgcc caggcttcca
     4741 gccggtaatt tattgtgcac aggtaaacgc atagggaggc aaagcaatgt aaagctgact
     4801 atgtaagttg tctgatttat ttacggtaca aaatggcttg tgaataccac tgtcctgtca
     4861 cgatggtttc gtccaccatg acgacaacgt aataatcagc ttttgcagcg acagctttcg
     4921 ctctgatttc tgctaatgcg tcatccggag aaccccgaac catcgtgctt acgctaccta
     4981 ttcgctgtaa cccttgcgtc tggtcgcggc gaatctcttg cggatggtcc gttactggcg
     5041 gtgctggctg tggcgtacct tgcagtgcgc tacaggcact taacatcaac accaataata
     5101 aactggcaaa ccggtaaata acgctattac gtttcctgct aaccatagtg tagtgcctta
     5161 ttaatttaac tttgggggaa tgttcccgaa ttgttacctg gtacgcgatt ttcgaatgaa
     5221 aacgtgacga aagcgtaacc cacatctcaa cattatgaac taataccgcc agcagaaact
     5281 tgtgctaagg atttcttcat gtcataccag acaaaaagga gagacagatg attgaaatag
     5341 aatcacgcga gctggcagat attcccgttc ttcatgctta tcctgtcggg caaaaagata
     5401 ccccgttacc gtgcgtaatt ttttatcacg gctttacttc atccagtctg gtgtatagct
     5461 attttgccgt tgcgctggcg caggctggtt tgcgggtgat catgccggat gcgcccgatc
     5521 acggtagccg ttttagtggt gacgcagcgc ggcggttaaa tcaattctgg caaatcttgc
     5581 tacaaagtat gcaggaattc actacattac gtgcggcaat agccgaagaa aactggctgc
     5641 ttgatgaccg tctggcagtc ggtggcgcgt cgatgggcgc gatgacggca ctgggaatta
     5701 ccgctcgcca ccccacggtg aaatgtaccg ccagcatgat gggatcgggc tattttacat
     5761 cgctcgcccg ttcactgttt ccaccgctga tacctgaaac ggcagcacag cagaatgaat
     5821 tcaataacat tgtcgcgccg ctggcagagt gggaagcgac aaaccacctg gaacaacttg
     5881 gtgacagacc tctactgctg tggcatggcc tcgacgatga cgttgtgcct gccgacgaat
     5941 cactacgttt gcagcaggcc ttaagcgaga cggaacggga taaactgcta acctgttcat
     6001 ggcagccagg cgtgcgtcac cgcattacgc ctgagacgtt agatgctgcc gtgacatttt
     6061 tcctgcagca tctttaaaca cgcagaatgc tgaccccttg cgcttccagt tgttgcagga
     6121 tttccgggtt agcatttttg ccagtgatca gcatatcaat ttgatcggca cggctaaaaa
     6181 gcattcccgc gcgttcgcca atcttactgc tatcaaccag taccaccagt tttcctacca
     6241 cgctcagcat cttctgctct gccattgccg tcagcatatc ggttttatac aacccttctg
     6301 cggtcagtcc tttgccgctg gtaaacatcc agtgcccggc atagagactg ttttcgctgc
     6361 cctgcgggct taaagtgatg gactggcttt tattgtactg cccgcccatg atgatcacgc
     6421 tgtcatgctc ctgatcgatc aggtagtttg ccagcggtag ataattagtg atgatttgca
     6481 ctggcttgcc acacatttcc cgcccaagca gaaacgcggt ggagccgcag ttgatgacta
     6541 cgctttcgcc cggattaacc agctgcgagg ccgctttagc aatacgtact ttttcatcgt
     6601 gattctgcgc ctgatgcaga ttcatcggcg tccagcgcgg gcgctgttgg gtaatagctt
     6661 ctgcgccatt gcgcactttt ttcagtttgc cgctttcgtc aagtttattg atatcgcgtc
     6721 gcgcagtggc aggcgaaatt cccagacgct caacgacttt ctcaacggtc acaaagccca
     6781 attgtgcgag catttccagg aggatttgat gtctttgtgc ttcagtcatg agctattccg
     6841 ataaaatttg atttttttag atgatatttg aaatagccag gaaatactac gccggatagc
     6901 gcgaacttct ccacgctatc cggtataaac gacagattac aggaatgact tgaacggcag
     6961 atccggttca atagtgaagc aatcatcgaa accgcgcgga tagtggtact cgaagttgtc
     7021 tttatccagc ggccaggtaa atttgccgcc cacctgccag ataaacggct taaagccata
     7081 tttcaggcga tcttttttca tctcccacag cacgcggatc tcttgcggat cggcctggaa
     7141 gtttgaccag atatcgtggt ggaacgggat aaccactttc gcattcagcg cttcacccat
     7201 acgcagcata tcggcgctgg tcattttgtc ggtgataccg cgcgggtttt cgccgtacga
     7261 tcctaacgcc acgtcgatct gatgttcgtt accgtgcttc gcataatagt tagagtagtg
     7321 ggagtcgccg ctgtgataca gggagccgcc aggcgttttg aacaggtagt tcaccgcgcg
     7381 atcgtccatg ccatctggca gtacgccagc cgctttttga tcggcaggca gggtgatcag
     7441 tgcagtacgg tcgaaagcat caagcgcatg aatttcaatg tctttcactt ttactacatc
     7501 gcccggtttg accacgatgc aacgctcttt cggtacgccc cagccaatcc acaaatccac
     7561 acaggttttc ggtccgataa acggtacgtc atcagcacag ttctgcatca cggcagcagc
     7621 gacgttaacg tcgatatgat cgttgtgatc gtgagtcgcc agtaccgcgt cgatctggcg
     7681 aatcgcaaac ggatcaagaa caaacggggt ggtacgcagg tttggctgca gttttttcac
     7741 gccagccatg cgctgcatct ggtgaccctg tttcattaac gggttaccgt gactttgttt
     7801 gccagtgccg caccagaaat caacgcaaac gttggtgcca ccttccgatt tcaaccagat
     7861 cccggtgcag ccaagccacc acatcgcaaa tgtgccagga gcgacctgtt cttgttcaat
     7921 ttcttcattc aaccagctac cccactccgg gaaagtgctc aggatccagg attcacgggt
     7981 gatacttttc actttactca tcgccattta ccttcatgat agttcaattc gaatcaatat
     8041 gtgattggtt ttgattaatc ctggcactat tttttcagga aggcaatgac cattttttga
     8101 ctttttgcca ggggagttgt tgttgatttt gagtatggaa agatttaatg gaatgtgtaa
     8161 ttcaattaac taaatgaatt taaatgaata attgtttcgt tgtgtgaatc ccactctatc
     8221 catgtggaat tatttgcggg tcgcgtcaca tttaatcata aataatcttg ttgtgattac
     8281 ttttgaaaat tagagtgagt gcacaacatt ccgggtgtgt ggaatacccg gttacctctt
     8341 cttcaggaga tcgttatgga gatcctctac aacatcttta ccgtgttttt taaccaggtc
     8401 atgaccaatg ccccgttgtt gctgggtatt gtgacctgtc tgggctacat cctactgcgc
     8461 aaaagtgtca gcgttattat taaaggcacg attaaaacca taattggttt catgttgttg
     8521 caggcagggt ccggcatcct caccagcacc ttcaaaccgg tggtggcgaa aatgtccgaa
     8581 gtctacggca ttaacggcgc aatttccgat acttacgctt cgatgatggc aaccatcgac
     8641 cgcatgggcg atgcctatag ctgggtgggg tacgcggtgt tgttagcgct ggcgctgaac
     8701 atctgttacg tgctgctgcg tcgcattacc ggtattcgta ccatcatgct gactggtcat
     8761 atcatgttcc agcaggcggg gctgattgcc gtgacgatgt ttatcttcgg ctactctatg
     8821 tggacgacca ttatctgcac cgcgatcatg gtttcgctct actggggcat tacctccaac
     8881 atgatgtaca aaccgacaca aatcgttacg gatggctgcg gcttctccat cggtcaccag
     8941 caacagtttg cggcgtggat tgcttataaa gtcgcgccgt tcctcggcaa aaaagaggaa
     9001 agcgttgaag acctcaaact gccaggctgg ctgaatattt tccacgacaa catcgtctcc
     9061 acggcgattg tgatgaccat cttctttggt gccattctgc tctccttcgg tatcgacact
     9121 gtgcaggcga tggcaggcaa agtgaactgg acggtgtata tcctgcaaac tggtttctcc
     9181 ttcgcggtgg cgatcttcat catcactcag ggcgtgcgca tgtttgtggc ggaactctct
     9241 gaagcattta acggtatctc ccagcgcctg atccctggtg cggttctggc gattgactgt
     9301 gcggctatct atagcttcgc gccgaacgcc gtggtttggg gctttatgtg gggcaccatc
     9361 ggtcagctga ttgcggttgg catcctggtc gcctgcggtt cctcgatcct gattattccc
     9421 ggctttatcc cgatgttctt ctccaacgcc actatcggcg tgttcgctaa ccacttcggc
     9481 ggctggcgtg cggcgctgaa gatttgtctg gtgatgggga tgatcgaaat ctttggttgc
     9541 gtctgggcgg tgaaacttac cggtatgagt gcctggatgg gtatggcgga ctggtcgatt
     9601 ctggcaccgc cgatgatgca gggcttcttc tccatcggta tcgcctttat ggccgtcatc
     9661 attgtaattg cactggctta tatgttcttc gctggccgcg cgctgcgcgc tgaagaagat
     9721 gcagaaaaac aactggcaga acagtctgct taataaggag ttttgattat gaccgtacgt
     9781 attctggctg tgtgtggcaa cggacaaggc agttccatga tcatgaagat gaaagtggac
     9841 cagtttttaa cccaatcaaa cattgaccac acggtaaata gctgcgcggt tggcgaatac
     9901 aaaagcgagt tgagcggcgc ggatatcatc attgcatcta cgcacattgc gggcgaaatc
     9961 accgtgaccg gcaacaaata cgtggttggc gtgcgcaaca tgctctctcc ggctgacttt
    10021 ggcccgaaat tgctggaagt gatcaaagaa catttcccgc aggatgtgaa gtaaggacgc
    10081 gccatgaaat tacgtgattc gctggctgaa aataaatcca tccgcctgca ggccgaagca
    10141 aatacctggc aggaagcggt gaaaatcggc gttgacctgc tggtagcggt agatgtggta
    10201 gagccgcgtt actaccaggc gattctggat ggcgttgaac agtttggtcc ttatttcgtt
    10261 atcgctccgg ggctggcaat gccgcacggg cgtccggaag agggcgttaa gaaaaccggt
    10321 ttctctctgg taacgctgaa aaagccgctg gaatttaacc acgaagataa cgacccggtg
    10381 gatatcctca tcaccatggc ggcggttgat gccaacactc accaggaagt gggcatcatg
    10441 cagatcgtca acctgtttga agatgaagag aatttcgacc gtttacgcgc ctgccgtacc
    10501 gagcaggaag tactggatct cattgaccgc accaacgcgg cagcttaaga aggaattgaa
    10561 catgtcatta ccgatgttgc aagtcgcgct ggacaaccag actatggata gcgcctacga
    10621 aaccactcgc ctgattgccg aagaagtcga cattatcgaa gtgggtacca ttctgtgcgt
    10681 gggcgaaggc gtgcgtgcgg ttcgcgatct gaaagcgctc tacccgcaca aaatcgtact
    10741 ggctgacgcc aaaattgccg atgcaggcaa aatcctttcg cgtatgtgct tcgaagccaa
    10801 cgctgactgg gtgaccgtaa tttgttgtgc ggatatcaac accgccaaag gtgcgctgga
    10861 cgtggcaaaa gagtttaacg gcgacgtgca gatcgaactg accggttact ggacctggga
    10921 acaggcgcaa cagtggcgcg acgcaggtat tcagcaggtg gtttatcacc gcagccgtga
    10981 cgcgcaggcc gctggcgtgg cgtggggtga agccgatatc actgcgatca aacgtctttc
    11041 cgatatgggc ttcaaagtca ccgtcaccgg tggcctggcg ctggaagatc tgccgctgtt
    11101 caaaggcatt ccaattcatg tgtttatcgc cggtcgcagc atccgtgatg ccgcttctcc
    11161 ggttgaagcc gcgcgtcagt tcaaacgttc catcgccgaa ctgtggggct aaggagcgga
    11221 tatgttgtcc aaacaaatcc cgcttggcat ctatgaaaaa gcgctccccg ccggggagtg
    11281 ctggctggaa cgcctgcgac tggcaaaaac gttgggcttc gattttgtcg agatgtcggt
    11341 agatgaaacg gacgagcgcc tgtcgcgcct cgactggagc cgcgagcagc gtctggcgct
    11401 ggtgaatgcg attgttgaaa ccggcgtgcg tgtgccgtcc atgtgccttt ctgcccatcg
    11461 tcgtttcccg ttgggcagcg aagatgacgc ggtgcgggcg caggggctgg agattatgcg
    11521 taaagctatc cagttcgccc aggacgtcgg cattcgcgtg atccagttgg cgggctatga
    11581 cgtttactat caggaagcca ataacgaaac gcgtcgtcgt ttccgtgacg gcctgaaaga
    11641 gagcgttgag atggcaagcc gcgcgcaggt gacgctggcg atggagatca tggattatcc
    11701 gttgatgaac tccatcagca aggcgctggg ctacgcgcac tatctcaaca acccgtggtt
    11761 ccagctctac ccggatatcg gcaacctgtc ggcgtgggac aacgatgtgc agatggagtt
    11821 gcaggccgga atcgggcata tcgtcgcggt gcatgtgaaa gacaccaaac cgggcgtctt
    11881 caaaaacgtg ccatttggcg aaggtgtggt ggatttcgaa cgttgcttcg aaacgctcaa
    11941 acagagtggc tattgcgggc cgtatctgat tgagatgtgg agcgaaacgg cggaagaccc
    12001 ggcggcagaa gtggcgaaag cgcgtgattg ggtgaaagcg cgcatggcca aagcaggcat
    12061 ggtggaggcg gcataatgca aaagctcaaa cagcaggtat ttgaagccaa tatggatctg
    12121 ccgcgttacg ggctggtgac ctttacctgg ggtaacgtca gcgccattga ccgcgaacgt
    12181 gggctggtgg tgatcaagcc cagcggtgtc gcctacgaaa ccatgaaagc ggacgatatg
    12241 gtagtggtcg atatgagcgg caaggtggtg gaaggggagt atcgcccgtc ttccgacacc
    12301 gcgacgcatc ttgaactcta ccgtcgttac ccgtcgcttg gcggcattgt ccatacccac
    12361 tccactcatg ctaccgcatg ggcgcaggcg gggctggcga tcccggcgtt aggtactacg
    12421 cacgccgact acttctttgg cgacatcccg tgtacgcgcg gattacgcga agaagaggta
    12481 cagggcgagt atgaactgaa caccggcaaa gtgattatcg aaacgctggg caacgccgag
    12541 ccgctgcata cgccgggaat tgtggtgtat cagcacggac cgttcgcctg ggggaaagat
    12601 gcccacgacg cggtgcataa cgcggtagtg atggaagaag tggcgaaaat ggcgtggatt
    12661 gcgcgcagta ttaatccaca actcaatcat atcgacagct acctgatgaa taaacacttc
    12721 atgcgtaagc acggtcctaa cgcttattac gggcagaagt aagcagtgcg ccccggaatt
    12781 attacctcct gcgggatgta attggtctga ttccggggcc tctccagtta ataaaatcat
    12841 caacatcagg tgctttatgg ctatcaaagg attgtttgtc agaacggatc cgcagcgtcg
    12901 ccgctatggc gttgcgttac ttgtgggtgt actttcagga attatttcag catttgttaa
    12961 atggggagcg gaagtcccct tgccaccgcg cacattttcc ggtggtcgcg atgaatttaa
    13021 cccgccatat atctttctac gagattattt aggtatcgac ccaacccaaa ctgtgtacac
    13081 attctcggaa catattatca acccggtgat ggtgacgcat atcatcttct cactggtttt
    13141 tgcgataggg tattgtgttg tcgcggaaat tttcccgaaa gtgaaattat ggcaggggat
    13201 attagcaggg cttattgtga cagtggcagt ccacggtata ttttgcccgg cgctgaatta
    13261 aacgccgccg ctcactcaat tgccttttga cgaatatgcg tctgaaatcc tggggcatat
    13321 tttctggttc tggataatag agattatgcg ccgcgactta cgtaatcgca ttactcatga
    13381 gccagatccg gaagtcgcaa ttcggtgaat aaccgtataa aaaagccccc tgcgaagggg
    13441 gcaaagcaaa ctatggcaat gtttcgttgg ttatacctgg tgctagcgat aaatatccgc
    13501 gctggcgtgc atattgccgt tactccccgg ttcccgcatc agaattacgt ggtagtacgt
    13561 tgcgccctgc gcatctgtct cttcatttaa tgcctgacgt gcttcgcttt cagtggcgaa
    13621 attatgattg atataaatca cgcttaagct ctgtacgtcg tccatatttc tggactggtg
    13681 gttattaatt tcaatggctg cccatgtatt tgcacttagc aaaagcacag ccagaagggc
    13741 taaaacacga ctgaacatag atacctcctc gacggctgac tttgtgtgct ctcctctgtg
    13801 atgatcttct gatttaattt taatcaatga taaagaagtt gatggtgacc atttctgatg
    13861 cagttgttca aaaaaacact gtgacggaat gtgatgaact tcaaatcagg gagttagttc
    13921 ttttgagcga aagatgagat ttatttgtcg gctggccttg agtttagcgg ggcatacaag
    13981 tactataacg cgtcattttt cagccgacct ttaacacgtt ccttgcctcc ccgggattcg
    14041 gctgacccag acaggaggct gaataatccg taaggagcaa ttcgatgcgt cattacgaaa
    14101 tcgtttttat ggtccatcct gaccagagcg aacaggttcc gggcatgatc gagcgctaca
    14161 ctgctgccat cactggtgca gaaggcaaga tccaccgtct ggaagactgg ggccgccgtc
    14221 agctggctta cccgatcaac aaactgcaca aagcacacta cgttctgatg aacgttgaag
    14281 ctccgcagga agtgatcgat gagctggaaa ctaccttccg cttcaacgat gccgttatcc
    14341 gcagcatggt tatgcgtacc aagcacgctg ttaccgaagc atctccgatg gttaaagcga
    14401 aagacgagcg ccgtgagcgt cgcgatgatt tcgcaaacga aaccgctgat gatgctgaag
    14461 ctggggattc tgaagagtaa tttctgatga ccaaccgtct ggtgttgtcc ggcaccgtgt
    14521 gcaggactcc ccttcgaaag gtcagtccat caggaattcc tcactgccag ttcgtgcttg
    14581 agcatcgttc tgtgcaggag gaagccggct ttcaccggca ggcatggtgt caaatgcccg
    14641 ttattgttag cggacacgaa aaccaggcca ttactcacag tataacggtc ggcagtcgca
    14701 tagtcgttca ggggttcatt tcatgccaca aggcaaagaa cggactgagc aaaatggttt
    14761 tgcatgccga gcagattgaa ttgatagatt ctggagacta gccatatggc acgttatttc
    14821 cgtcgtcgca agttctgccg tttcaccgcg gaaggcgttc aagagatcga ctataaagat
    14881 atcgctacgc tgaaaaacta catcaccgaa agcggtaaga ttgtcccaag ccgtatcacc
    14941 ggtacccgtg caaaatacca gcgtcagctg gctcgcgcta tcaaacgcgc tcgctacctg
    15001 tccctgctgc cgtacactga tcgccatcag taatcggtca cggtccatta atacgacttt
    15061 gagaggataa ggtaatgcaa gttattctgc ttgataaagt agcaaacctg ggtagcctgg
    15121 gtgatcaggt aaacgttaaa gcgggctatg ctcgtaactt cctggtaccg cagggtaaag
    15181 ctgttccagc taccaagaaa aacattgaat tcttcgaagc acgtcgcgct gaactggaag
    15241 ctaaactggc tgaagttctg gcagctgcta atgctcgcgc tgagaaaatc aatgcactgg
    15301 aaactgttac catcgcgtct aaagctggcg acgaaggtaa actgttcggt tccatcggta
    15361 ctcgcgacat cgctgacgct gtaactgcag ctggcgttga agtggctaag agcgaagttc
    15421 gtctgccgaa tggcgttctg cgtaccactg gcgaacacga agtgagcttc caggttcaca
    15481 gcgaagtatt cgcgaaagtg atcgtaaacg tagtagctga ataattcgtt attcaacgag
    15541 acgtaaaaac gccgaccatt ggtcggcgtt ttgctttcta tttttcgtca ggtattagtt
    15601 tcgcaagtag atccattcac cattctcttg tgtccataag tcaggatggt ttgctggcgt
    15661 tagatacata cgagcgcaac tgatgtctcg ctcctgcggc actcgctcga aacccaaaac
    15721 cgagtagatt gcggctgaac ttgataagga atgcagacca attttcaaat catggggtaa
    15781 atcagaatac gcgtttagca atgcagcaat gatgaatccg agggcattag aaacgcctgt
    15841 aacggtgcga agttggtcga tataaagatc gattgttggt agttcagatg accagcaatt
    15901 aggcatttgg gcaggaaggg ttacaacgta tcctatcgtt tggccggtat agtctggagt
    15961 accataacca ggtcccaaaa ccacttcgtg tattgtgtat ttactattgg gttcgaagga
    16021 ttcgacatct tgcaatgaat atttcagttc tgcggttaac ctcgcacccg cgtaagcttt
    16081 attgtatttc tgggcgtgaa tattatctaa tgtagcttca tggttccatc caaaagaatt
    16141 atcaccattc attgttactc catcgtaagc attacacttc gttgctaact tattgaatgc
    16201 ttgccagtct gagagatcta gtttgtggat ctcaacagta cgtctgccat cgcaattatg
    16261 atctcttcca cgatttggca gtaatgtagc gcgtgcgtat tgatgaaatt ttagttttgc
    16321 tggtttgtcg gtggacgaaa aacgaggtaa atatgcgggg aatgaataaa tagttgttgg
    16381 taatgtcatt ttattgttgc ctgtttaata tttttacaaa tatcgcagtt gaatgttcaa
    16441 agaaaaagaa ttgattttaa taaaaataag tttgttttct gaggtggtga aaatagcgga
    16501 tggtgaaaga tattaatatc aaaaatcgct cattatggat ataacgatgc ccccggggag
    16561 aaaatgactt ccacgccttc caccatacat tcttgttgtg cggtatgtaa ttattctacg
    16621 ctgttggtat cggtgcgttt gttaatcatc tggttaaccg gccacaaaaa gctattgaga
    16681 aaattattta ttttacatgg gattattata ttgctaaccc ttggttttta aaagttgtgc
    16741 atagtgaaaa tcaaagtaaa ggtgtgcatt atgcaaaatc acagcgtctc ttagaaatta
    16801 accatgcgca cttgcagtta atggaatcct tattggatga agggaagaaa tacaatattt
    16861 ttaagccaag tatcgaccca ttgcaggtga atattaatat tgctgcgctt gggggatatt
    16921 atttgatcaa ccagcatacg cttggcctgg tttatcatat cagtatggtt tccccccagg
    16981 cactggaagc cagacgtaag gtcatcaaag agacaatcct tagctggctt ttggttgacc
    17041 cttcatctac cgcgcacgaa taaaactgcc atccggctgg cgggtaaaca ggacctgttg
    17101 attattcccc gtatcaatgg ttaagcccgt caccacgccg ctggcgttct ggcggatttt
    17161 caccatctgc ccattttgca aattactcag cggcttaccc gcgccttcta cctgcgccat
    17221 tgcatagaca tcggtagcgg gcagtccgtg gtcgcggaac agctgcgcca tcgttttacc
    17281 ggggtcgaca cggtaagagc gccattgatt atcaattccg ctatctggct ggaatggttg
    17341 cgtttgggta gtttgcggct gttcttctgg ctggccttcc tgtataggtt ctggagcgac
    17401 cggagccacc tgatcaggat cattttgtgg tgtgactaat tgcgcccgca gttgttcttc
    17461 tgtcggcggt tgtgattgcg actgaatatc taactgcgct tcacgcgtca ccaccggcgc
    17521 gttgggcgta tcatcagatg gaagcagaaa tccgaccacc aatacaatgg cggcaataat
    17581 gatcccccga cgatgcatcg gcggcagcgg gtccatgaag cgaaaattgt ccggcgcgtg
    17641 ccagactttc tccagggttg gttttagttc aaagcgcccg ggcatggttt cctcctgctc
    17701 cgcgtcttgt tcctcaatca tagcctatga ataagctaac gctatgatgt ccgtggtaaa
    17761 cccgccttta ttatattcat acgggatatt gctattgttt ctttttcccc gggatttgtc
    17821 atcattcctg cgacaaagtt ttacccaaag aagtgtggct gatatgctgc ccgctacttt
    17881 tataccctaa gaaaggaaat acgatgacca ccccaacttt tgacaccatc gaagcgcaag
    17941 caagctacgg cattggtttg caggtagggc aacaactgag tgaatctggc ctgcaagggc
    18001 tgctgccaga agcactggtt gcaggtattg ccgatgcgct ggaaggcaaa catccggctg
    18061 ttccggttga tgtggtgcat cgcgcgctgc gtgaaatcca cgaacgcgcc gatgccgttc
    18121 gtcgtcagcg tttccaggcg atggctgctg aaggtgtgaa atacctggaa gaaaacgcca
    18181 aaaaagaagg tgtgaatagc accgaatctg gcctgcaatt ccgcgtgatc aaccagggtg
    18241 aaggcgcaat tccggcacgt accgaccgcg ttcgtgttca ttacaccggt aaactgatcg
    18301 acggcaccgt gtttgacagc tccgttgctc gtggtgaacc cgctgaattc ccggttaatg
    18361 gcgtgatccc tggctggatt gaagcactga ctctgatgcc ggtaggttct aaatgggaac
    18421 tgactatccc gcaggaactg gcatatggcg agcgcggcgc aggtgcatcc atccctccgt
    18481 tcagtaccct ggtgtttgaa gtcgaactgc tggaaatcct ctaagcagcg cattctgttc
    18541 ccctcgaacc agaggggagc aggcattcag caataaaccc ttcagtttgc caaacggcgc
    18601 tattttgtgt tgcaaagacc ccgtaagcgt gtatttttgt gagctgtttc gcgttatcac
    18661 cgtgatatga cactcacttt aaacataaaa ttaacattag atctaaatct tagtattcat
    18721 cccgcgtatt gttacctaat atcgatgagt cccgatacag attcgtcgta tcatagactg
    18781 actaaaggcc gtagagcctg aacaacacag acaggtacag gaagaaaaaa catggtagat
    18841 caggtaaaag tcgttgccga tgatcaggct ccggctgaac agtcgctacg gcgcaatctc
    18901 acaaaccgac atattcagct tattgccatt ggcggtgcca ttggtactgg gttgtttatg
    18961 gggtccggca aaacgattag ccttgccggg ccgtcgatca ttttcgttta tatgatcatc
    19021 ggttttatgc tctttttcgt gatgcgggca atgggggaat tgctgctttc gaatctggaa
    19081 tacaaatctt ttagtgactt cgcttccgat ttactcgggc cgtgggccgg atatttcacc
    19141 ggctggacct actggttctg ctgggttgta accggtatgg cagacgtggt ggcgatcacg
    19201 gcttatgctc agttctggtt ccccgatctc tccgactggg tcgcctcgct ggcggtgata
    19261 gtgctgctgc tgacgctcaa tctcgccacc gtgaaaatgt tcggtgagat ggagttctgg
    19321 tttgcgatga tcaaaatcgt cgctattgtg tcgctgattg tcgtcggcct ggttatggtg
    19381 gcgatgcact ttcagtcacc gactggtgtg gaagcgtcat tcgcgcattt gtggaatgat
    19441 ggcggctggt tcccgaaagg tttaagtggc ttctttgccg gattccagat agcggttttc
    19501 gctttcgtag ggattgagct ggtaggtaca accgctgcgg aaaccaaaga tccggagaaa
    19561 tcactgccgc gtgcaattaa ctctattccg atccgtatca ttatgttcta cgtcttcgcg
    19621 ctgattgtaa ttatgtccgt gacgccgtgg agttcggtag tcccggagaa aagcccgttt
    19681 gttgaactgt tcgtgttggt gggtttgcct gcggctgcca gcgtgatcaa ctttgtggtg
    19741 ctgacctctg cggcgtcttc cgctaacagc ggcgtcttct ctaccagccg tatgctgttt
    19801 ggcctggccc aggaaggtgt tgcaccgaaa gcgttcgcta aactctctaa gcgcgcagta
    19861 cccgcgaaag ggctgacctt ctcctgcatc tgtctgctcg gcggcgtggt gatgctgtat
    19921 gtgaatccca gcgtgattgg cgcgttcacg atgatcacga ccgtttccgc gattctgttt
    19981 atgttcgtct ggacgattat cctttgctcg tacctggtgt accgcaaaca gcgtcctcat
    20041 ctgcatgaga agtcgatcta taagatgccg ctcggcaagc tgatgtgctg ggtatgtatg
    20101 gcgttctttg tgttcgtggt cgtgttgctg acactggaag atgacactcg ccaggcgctg
    20161 ctggttaccc cgctgtggtt tatcgcgctg gggttgggct ggttgtttat tggtaagaag
    20221 cgggctgctg aactgcggaa ataaccgcat tatcatgctg gatggcgcaa tgccatccag
    20281 cttttagatc actcacccgc cagcgcgtgt gggaacagca cattgttttc cagactgatg
    20341 tgatccatca ggtcatcaat cagttcatta ataccgttat acatcgcttt ccaggtggtg
    20401 caggcttctg gcggcggtgt gacgttattg gtagtgtgtt tgatcacttc cagcagttcg
    20461 cccgcttcat cgtgctcgct ttccattacg ctgattggcc ccattgcctg gctgcccatg
    20521 ccttgtttga tcatcgggaa gaggatctgc tcttctttca tcatgtggct ggaaagctct
    20581 tcatgcagca tggtcaggta ttttgtcagc ccttttggca cgctcggttt gtcggcgtga
    20641 acgcgctcga ctttagtcgc ttgcaggatc agctccggca gttgctcgcg gtgacgatcg
    20701 tggtagcgca cgatgatatg gtcaatgatt tctgccagcg gggcgctacg ccagtctttc
    20761 tcaatcggtt gttcagcaag ctttgccagt tcagcttcaa tgacctcaac atccagttct
    20821 ttacgtgccg ccgcgcgcgc cagcgtctgc ttaccgccac agcagtaatc catatcatat
    20881 ttacgaaaca gagctgaagc gtgaggaata gagagcgcca gttcacctaa aggttggtcg
    20941 cgataagcca tagctgatac ctcattctta ataagataag atgtatttta aatgcatctt
    21001 taaggcaaaa gctataaccc ttacgtagca gaggcttatt taactcactg ccagcgtgtc
    21061 aactttctga gacagattca gttaaaggtt tttctggttt tgctctgacc gcaatgacca
    21121 cgccaatcac taacagcgcg ataccgctca gcgtcattag cggcggcatt tgctggcgga
    21181 gtaaaaaggt gtacagcaaa cctgccagcg tttcgaaaac aatcagcggc ccgagaatca
    21241 ctgtcggtaa tcgctggctg gcgatgttcc agcagagtgc gccaacccat gagcaaagca
    21301 cggctatcgc aaccatcaga ctaataaaca ccagcggacg ggggccaaaa ggtaaggaga
    21361 agtccggcgt ttgtatattc agccagtaac aggcgacgag atagccgatg agagaaaccg
    21421 gcagcgtgac cagcgcctgc gccgtcgccc acatcatcgg atttttgtcg ggattttccc
    21481 gcagccagcg ggcgttgcgc agggcatacc atgtccagca gaccacggaa actaacgcca
    21541 gcacgatgcc agaggtataa cgtgcccagt caaaatcggg gagtccgtgg tttaactcag
    21601 caatattcac acacgccagg ccgatgccaa tacaaatcag tgccggggcg agttttcccc
    21661 acgcgagttt gccgtcgcgc tggctataaa gcagattggc aaaaacggga atcaccaccg
    21721 gcagggtgcc aataatcatc gtggaaacag gcgcgccagt acgctgaatg gcactggcaa
    21781 ggcagaagta atagataagg ttgcccatca tggtgagcat caaggcggta agccagtcgc
    21841 gacgcgctaa ctgacgcaga cgcacgcgtc ccagccaggc aatgggcagc gcaattaacc
    21901 ctaacgccag ataacgcccc atagactgca acatcgccgg gtattccggc acgatcaacg
    21961 gcccgacaaa aataagcccc cacatcaacc ctgctaacag ggcgtacagc acgccgctaa
    22021 tcattactgg catccattgg tctgtcagaa gaaacgttca ggaagcagac atgattgctc
    22081 ccggcatccc gtcattatca gagaggatgc gggaggatgc cactttaatt aactacttat
    22141 taacattaaa aagatggctt acgctttcgg ctaacgttgt cgttgggcgg ccaatcaatt
    22201 tgctaagcgt tttgctgtta tcaaacagac cacctttcga tgcgccaacg tcagaatccg
    22261 ccagcatatc cgccagtccg tcgggcagtc cgacgctttt cagtgccgcg gcgaaatcgg
    22321 cttcgctcag attttgatag gtaacggatt ttccgctctg tttggtcagc tctgccgcta
    22381 actgtgtcaa cgtccaggca ctatcgcccg ccagttcgta aaccttgcct tcgtgaccgg
    22441 cttcgctaat cacgcgtgcc gcagctgccg cataatctgc ccgcgttgct gaggcaattt
    22501 tgccatctcc cgccgcaccg ataaatacgc cgtgttccag tgctgccggg gcgctggcga
    22561 ggtagttttc gctgtaccag ccgttgcgca gcagggtgta aacgatgcca gaatcagcca
    22621 gcattttctc cgtctcgatg tgctcatcgg cgaggccgag cggagattta tccgcgtgaa
    22681 gcagactggt ataagcgata aatttcacac cagccgtctt tgcggcatta ataacattac
    22741 gatgctgcgg ggcacgttga cccacttcgc tggaagagat cagcagtagt ttttccactc
    22801 cctgaagtgc agatgtcagt gcggcttcat cgccgtagtc agcctgacgc acggtaatgc
    22861 cttgtgctgt cagtgcctgg gcttttgccg gattacgaac gatagccact atttggctgg
    22921 caggaaccgt tttcatcaag gattcaataa tatagtgacc aagttggcca gtggcaccag
    22981 taatagcgat catgggaagt ctccatcgtt ttgtcttgtg tttaaatacg ctaacaccta
    23041 aacttacttt tagtaagtac gcacaaaaag gtaagtatga aatgagtcag gttagcctgt
    23101 cgcaacaact gaaagagggt aatctctttg cggaacagtg cccgtcgcgc gaggtgttga
    23161 aacacgtcac cagccgttgg gggatgttga ttctggtggc gctacgcgaa ggtactcatc
    23221 gctttagcga cctgcggcgt aaaatcggcg gggtgagcga aaagatgctt gcgcagtcgt
    23281 tacaggcgtt agaacaggat ggttttctta accgtatcgc gtatccggtg gtgccgccgc
    23341 atgtggaata tagcctcacg ccgctgggcg agcaggtgag cgaaaaggtt gctgcactgg
    23401 cggactggat tgagttgaat ttgcccgagg tgttggcggt gcgggatgaa cgagcggcat
    23461 aactgccgga tgcacggcct acggtgtatg acttgtaggg cggataagat gcgccagcat
    23521 cgcatccgcc aataaatgcc ggatgcggtt gatgatttat aggccgaaaa agaagtgttt
    23581 tacttactca aatccacctg ataaatcgca aacccgatat catcggtcgc gactttattc
    23641 atcggatatt gccctttctc tttaataaac gctgcggctt tatctgacgg agaggtttcg
    23701 aaacggatat ccagtttctt atcgccagct atcggtgcta aacgccagtt gttatctgcc
    23761 gccgggtgaa tttcccccgc acgtttcgac tcatcagcaa tccacgctgc cagcactgag
    23821 cggttctcat ccggtgaagc aaaagcgata tggctgtcgc ccgtaccagc aaatttgccg
    23881 ccgtaagcgc gatagttatt ggtggcaacg aggaacatgg cgttcggatc aatcggcttg
    23941 ccattaaagg tcaggttctt aatccgctct gcattggcat taaccatctg gcactcgccg
    24001 tcatagcggg cgggttgggt aacatcaatc tgataattca caccatcaat aacatcaaag
    24061 ttataggtgc ggaaaccatc ccagttgatg agtgactgtg gtttcgtgct gttaggatca
    24121 atctggttaa actgtccggc ggagcactcc agccactctt tcacctcttt accgctggct
    24181 ttcactacaa tcagcgtatt ggggtagaga taaagatcgg cggcattacg gaaggtcaac
    24241 tggccttttt ccacctccac atagcttgcc gggtcatttt tgcgaccacc aactttaaac
    24301 ggtgcggcag ctgaaagcac cggcagtttt gccagatccg gatcgccctg aatgtaatgt
    24361 tcgacatacg ctttttgcgc gttgttcacg acttgcacgg tcggatcgtc ctgcaccagc
    24421 gccagatagc tatacatatt gtcggcagat ttaccgattg gcttgctgac gaactggcgt
    24481 gtggcatcgt gatcggcttt gagtgtttct accagcttgc tgtcttccgc cgcgagggat
    24541 tttttattgg cgatgtcgta aatcggccgt gcttccgctt tcgcctgcgt cacctgccat
    24601 ttaccgctgt cattactgag ttgtaagtcg accaccccaa gatgatcgcc ccacatgccc
    24661 ggcattaccg ccggaacacc attcagcgtg cctttggtga tatcagcccc ttcgatatca
    24721 gcaaaatctt tacccgggaa aacggcgtga gcatggccaa acataatggc gttaacgccc
    24781 ggaatttcac tgaggtaata aactgagttt tccgccatta ctttatacgg atcggcagac
    24841 agcccggaat gcgccagaac gacaacgaca tcggcacctt tctcgcgcat ttcaggcacg
    24901 tatttgcgca cggtttcggt aatatcattc accgtcactt ttccggataa attagcttta
    24961 tcccagccca tgatttgcgg cggcacgacg ccaatatagc caatcttcag cgtctgtttt
    25021 tttccgtctt tatcgaccac ttcggtatct ttaattaaat acggtgtaaa cattggctgt
    25081 ttggttctgg cgtcaatgac gttggcattt acataaggga atttcgctcc cgccagcgca
    25141 tttttcaggt aatccagacc gtagttaaat tcatgattgc cgagtgtacc gaccgtataa
    25201 tccagcgtat tcagcgcctt ataaaccgga tgaacatcac ctgcttttaa tcctttcgcc
    25261 gacatgtaat cggccagcgg actcccctga atcaaatcgc cgttatcgac cagtacgctg
    25321 tttttcactt cattgcgggc atcgttaatc aggcttgccg tacgtaccag tccgaatttt
    25381 tccgtggcgg tgtctttgta ataatcgaaa tccatcatgt tgctatgcag atcagtggtt
    25441 tccatgatac gcagatcgac cgtcgctgca ttcacactgg cggcaatcag cgtggccagg
    25501 agcgttgcgc taaacttaat catcagggac atccttttat catcgggaat acgaaagaaa
    25561 agggagaata aacgccttac ttatagaaca gtgaagaatg ccacaatttt acgctttgaa
    25621 aatgatgaca ctatcacagt tggcgcattc attaacgata gggtataagt aaaacaataa
    25681 gttaacaccg ctcacagaga cgaggtggag aaatgttaga tcaagtatgc cagcttgcac
    25741 ggaatgcagg cgatgccatt atgcaggtct acgacgggac gaaaccgatg gacgtcgtca
    25801 gcaaagcgga caattctccg gtaacggcag cggatattgc cgctcacacc gttatcatgg
    25861 acggtttacg tacgctggca ccggatattc cggtcctttc tgaagaagat cctcccggtt
    25921 gggaagtccg tcagcactgg cagcgttact ggctggtaga cccgctggat ggtactaaag
    25981 agtttattaa acgtaatggc gaattcaccg ttaacattgc gctcattgac catggcaaac
    26041 cgattttagg tgtggtgtat gcgccggtaa tgaacgtaat gtacagcgcg gcagaaggca
    26101 aggcctggaa agaagagtgc ggtgtgcgca agctgattca ggtccgcgat gcgcgcccgc
    26161 cgctggtggt tatcagccgt tcccatgcag atgcggagct gaaagagtat ctgcaacagc
    26221 ttggcgaaca tcagaccacg tccatcggct cttcgctgaa attctgccta gtggcggaag
    26281 gacaggcgca gctgtacccg cgcttcggac caacgaatat ttgggacact gccgctggac
    26341 atgctgtggc tgcagctgcc ggagcgcacg ttcacgactg gcagggtaaa ccgctggatt
    26401 acactccgcg cgagtcgttc ctgaatccgg ggttcagagt gtccat
//
LOCUS       DAJVTL010000056        26310 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.056, whole genome shotgun sequence.
ACCESSION   DAJVTL010000056 DAJVTL010000000
VERSION     DAJVTL010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26310
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.056"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            381..2613
                     /gene="nrfB"
                     /locus_tag="OQQ26_002195"
                     /pseudo
     CDS             381..2613
                     /gene="nrfB"
                     /locus_tag="OQQ26_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308628.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage adsorption protein NrfB"
     gene            2600..5572
                     /gene="nfrA"
                     /locus_tag="OQQ26_002196"
     CDS             2600..5572
                     /gene="nfrA"
                     /locus_tag="OQQ26_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriophage adsorption protein NfrA"
                     /protein_id="HCS1857640.1"
                     /translation="MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRH
                     FVIYPRLDKALKAQKNNDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARL
                     LLEDQLKRHPGDARLERSLAAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNA
                     LRLAQLPIARAQLNDATFAASPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLS
                     AAERRQWIDVLLAGQLDDRILALQSQGIFTDPQSYITYATALAYRGEKARLQHYLIEN
                     KPLFTTDAQEKSWLYLLSKYSANPVQALANYTVQFADNRQYVVGATLPVLLKEGQYDA
                     AQKLLATLPANEMLEERYAVSVATRNKAEALRLARLLYQQEPANLTRLDQLTWQLMQN
                     EQSREAADLLLQRYPFQGDARVSQTLMARLASLLESHPYLATPAKVAILSKPLPLAEQ
                     RQWQSQLPGIADNCPAIVRLLGDMSPSYDAAAWNRLAKCYRDTLPGVALYAWLQAEQR
                     QPNAWQHRAVAYQAYQVEDYATALAAWQKISLHDMSNEDLLAAANTAQAAGNGAARDR
                     WLQQAEKRGLGSNALYWWLHAQRYIPGQPELALNDLTRSINIAPSANAYVARATIYRQ
                     RHNVPAAVSDLRAALELEPNNSNIQAALGYALWDSGDIAQSREMLEQAHKGLPDDPAL
                     IRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLTPEQNQQRFNFRRLHEEVGRR
                     WTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEAEYRIGRNMLLEGDLLSVY
                     SRVFDDTGENGVMMPVKNPMSGTGLRWKPLRDQIFFLAVEQQLPLNGQNGASDTMLRA
                     SASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYIRQDIQAWTADYRVSWHQKVANGQT
                     IEPYAHVQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVSLGVEYQYTFKAI
                     NQRNGERNNAFLTIGVHW"
     gene            5573..6463
                     /locus_tag="OQQ26_002197"
     CDS             5573..6463
                     /locus_tag="OQQ26_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4434 family protein"
                     /protein_id="HCS1857641.1"
                     /translation="MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLM
                     SQLRLQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMH
                     QKQSSAALESYLNRLLAADLQQARLWSPAPGVTPDGWYISAEIDDLNWRSEAARQPLL
                     TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKL
                     TAEQRERYLQASADCQSPAPASGVVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCG
                     KDTLYFSLRYLPVAHGILEY"
     gene            6646..7407
                     /gene="envY"
                     /locus_tag="OQQ26_002198"
     CDS             6646..7407
                     /gene="envY"
                     /locus_tag="OQQ26_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator EnvY"
                     /protein_id="HCS1857642.1"
                     /translation="MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNV
                     IELSTLNHVLITHINRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAA
                     NHSKQQPSKPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQ
                     HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQ
                     LCGYSSTSYFISVFKAFYGLTPLNYLAKQRQKVMW"
     gene            complement(7453..7529)
                     /locus_tag="OQQ26_002199"
     tRNA            complement(7453..7529)
                     /locus_tag="OQQ26_002199"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7493..7495),aa:Arg,seq:tct)
     gene            7772..8404
                     /gene="fimZ"
                     /locus_tag="OQQ26_002200"
     CDS             7772..8404
                     /gene="fimZ"
                     /locus_tag="OQQ26_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimZ"
                     /protein_id="HCS1857643.1"
                     /translation="MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY
                     LRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANG
                     FVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRY
                     LVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI"
     gene            complement(8407..8922)
                     /gene="sfmF"
                     /locus_tag="OQQ26_002201"
     CDS             complement(8407..8922)
                     /gene="sfmF"
                     /locus_tag="OQQ26_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria assembly protein"
                     /protein_id="HCS1857644.1"
                     /translation="MRRVFFSCFCGLLWSSSGWATDPLGTININLHGNVVDFSCTVNT
                     ADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTRTPASDTNLLAL
                     DDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVA
                     KADAIFMINYN"
     gene            complement(8933..9940)
                     /gene="fimH"
                     /locus_tag="OQQ26_002202"
     CDS             complement(8933..9940)
                     /gene="fimH"
                     /locus_tag="OQQ26_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrin D-mannose specific adhesin FimH"
                     /protein_id="HCS1857645.1"
                     /translation="MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNVFN
                     STNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLND
                     YLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMV
                     EIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASL
                     FSAAGPGNRPAGVMPQTKSIAIKCTNVAAQAYLSMRLEASAVSGQAMVSDNQDLGFIV
                     ADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDY
                     Q"
     gene            complement(9953..12562)
                     /locus_tag="OQQ26_002203"
     CDS             complement(9953..12562)
                     /locus_tag="OQQ26_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein"
                     /protein_id="HCS1857646.1"
                     /translation="MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFL
                     LENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMP
                     CFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQISL
                     LSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSW
                     NYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDN
                     MYPDSQQGVAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDV
                     TIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSPFFFQGTALGGL
                     PQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADDSRHEGDSIRFL
                     YAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDYDGEHRDEPIIVNYH
                     NLRFSRKDRLQLNISQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSL
                     SFSWNESVGIPDNERIVGLNVSVPFNVQTKRRYTRENALDRAYASFNANRNSNGQNSW
                     LAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGVGYNYDRDQHDVNW
                     QLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMPYASVY
                     RYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPF
                     GSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQA
                     VTVISAVCTHPGS"
     gene            complement(12593..13285)
                     /gene="fimC"
                     /locus_tag="OQQ26_002204"
     CDS             complement(12593..13285)
                     /gene="fimC"
                     /locus_tag="OQQ26_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HCS1857647.1"
                     /translation="MMTKIKLLMLMIFYLIISASAHAAGGIALGATRIIYPADAKQTA
                     VWIKNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAAD
                     RESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR
                     SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVSSQIPLPSGVQGKLKFQTVNDY
                     GSVTPVREVNLN"
     gene            complement(13505..14047)
                     /gene="fimA"
                     /locus_tag="OQQ26_002205"
     CDS             complement(13505..14047)
                     /gene="fimA"
                     /locus_tag="OQQ26_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308619.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial major subunit FimA"
                     /protein_id="HCS1857648.1"
                     /translation="MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVN
                     TDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAIND
                     NLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGT
                     GTSASAGQANADATFIMRYE"
     gene            14528..15394
                     /gene="folD"
                     /locus_tag="OQQ26_002206"
     CDS             14528..15394
                     /gene="folD"
                     /locus_tag="OQQ26_002206"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HCS1857649.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLP
                     AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
                     DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
                     QACVEYHDPQGE"
     gene            15396..15608
                     /gene="ybcJ"
                     /locus_tag="OQQ26_002207"
     CDS             15396..15608
                     /gene="ybcJ"
                     /locus_tag="OQQ26_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308617.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HCS1857650.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA
                     VETRKRCKIVAGQTVSFAGHSVQVVA"
     gene            15716..16237
                     /locus_tag="OQQ26_002208"
     CDS             15716..16237
                     /locus_tag="OQQ26_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1857651.1"
                     /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS
                     FKFGIAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSM
                     LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFTLSRYTTPYGHQVIISELMWVWLP
                     GMLLMGMLWWHRR"
     gene            complement(16273..17658)
                     /gene="cysS"
                     /locus_tag="OQQ26_002209"
     CDS             complement(16273..17658)
                     /gene="cysS"
                     /locus_tag="OQQ26_002209"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HCS1857652.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
                     LNILRPDMEPRATHHITEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
                     DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAG
                     GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
                     LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
                     DGPQGTTWRRK"
     gene            17832..18326
                     /gene="ppiB"
                     /locus_tag="OQQ26_002210"
     CDS             17832..18326
                     /gene="ppiB"
                     /locus_tag="OQQ26_002210"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HCS1857653.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     VDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSSMHQDVPKEDVIIESV
                     TVSE"
     gene            18329..19051
                     /gene="lpxH"
                     /locus_tag="OQQ26_002211"
     CDS             18329..19051
                     /gene="lpxH"
                     /locus_tag="OQQ26_002211"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HCS1857654.1"
                     /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARNADALYILGDLFE
                     AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
                     LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANS
                     KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
                     WHTEGSMVKVTADDVELIHFPF"
     gene            19169..19678
                     /gene="purE"
                     /locus_tag="OQQ26_002212"
     CDS             19169..19678
                     /gene="purE"
                     /locus_tag="OQQ26_002212"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HCS1857655.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA
                     HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
                     SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL
                     ENPDPRGAA"
     gene            19675..20742
                     /gene="purK"
                     /locus_tag="OQQ26_002213"
     CDS             19675..20742
                     /gene="purK"
                     /locus_tag="OQQ26_002213"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HCS1857656.1"
                     /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
                     VITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
                     RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSG
                     EVSLVGVRGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEQMLSAIMQELG
                     YVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV
                     NSPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
                     LIPLLPPEYASGVMWAQSKFS"
     gene            complement(20879..21772)
                     /locus_tag="OQQ26_002214"
     CDS             complement(20879..21772)
                     /locus_tag="OQQ26_002214"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HCS1857657.1"
                     /translation="MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYR
                     LAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMQPVT
                     TVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQESLEAAYGWQMKRDGKYLRRVVASPQP
                     RKILDSEAIELLLKEGHVVICSGGGGVPVTKDGAGSEAVIDKDLAAALLAEQINADGL
                     VILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAW
                     IGALSRIEETLAGEAGTCISL"
     gene            complement(21769..22584)
                     /locus_tag="OQQ26_002215"
     CDS             complement(21769..22584)
                     /locus_tag="OQQ26_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HCS1857658.1"
                     /translation="MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR
                     QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP
                     AHPQPLAVAWMQRAEETGLFGPLAMATSDPLPAELRQFRHCFQAALNGIKTDWRHWLG
                     KGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQ
                     GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP"
     gene            complement(22595..23854)
                     /locus_tag="OQQ26_002216"
     CDS             complement(22595..23854)
                     /locus_tag="OQQ26_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009029994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HCS1857659.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELHPGKTLLH
                     AGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAMLDQGEVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS
                     AALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEV
                     MDFLSVTDQFFLNLAMAYCKAAMDAGAMICAGSIVTAMTRNGNMFGIRVSGLGERWFT
                     APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR
                     AVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGIG"
     gene            complement(23864..25531)
                     /locus_tag="OQQ26_002217"
     CDS             complement(23864..25531)
                     /locus_tag="OQQ26_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
                     /protein_id="HCS1857660.1"
                     /translation="MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKA
                     LLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQAL
                     TQVRRWDSACQKLPDANLVLISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLK
                     TRAREKGLLVMGPDCGTSMIAATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGE
                     GITHAIGLGGRDLSREVGGISALTALEMLSADAKSEVLAFVSKPPAEAVRLKIVNAMK
                     ATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFIC
                     GLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADGHQIIDLGDDFYTVGRPHPMI
                     DPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDSQPLYA
                     IATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSSATQQHTPSLL
                     ENVAVINIGLRSFALALQSASKPVVHYQWSPVAGGNKKLARLLERLQ"
     gene            25848..>26310
                     /locus_tag="OQQ26_002218"
     CDS             25848..>26310
                     /locus_tag="OQQ26_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HCS1857661.1"
                     /translation="MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSH
                     GAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQ
                     QNGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYY"
BASE COUNT         6483 a         6945 c         6569 g         6313 t
ORIGIN      
        1 ttttgactaa tgataaggta ttcaaggcag ggttaagacg taagatgcaa aaagcagcca
       61 tggagagaaa ctatctggcg tcagtccttg cggggaacgg gctttcgtaa tcttgccctg
      121 cctgctcacc tcctccaggc acttccacta catgatgacc tgctcggtgc caccgctcct
      181 tttcactatg acgttaacct ccccgtccca ggacaccatg cttttgtcta cattctacgc
      241 aaacggcaac ttttataacc agtgtaaaaa taacgtgccg caatagtcat acctattaat
      301 ggtaaaaagc tgtcacaatt cataaaaaac cttaatatac gccaccctaa acataaccag
      361 cgttaatgta aggtttttgt gtggactggc ttcttgatgt ttttgctacc tggctctacg
      421 gcttaaaagt aatcgcgata acgttagcgg tcatcatgtt catcagcggg ctggacgatt
      481 tttttattga tgtcgtctac tgggtacgcc gcattaaacg caagttgagt gtttatcgcc
      541 gctacccgcg aatgagttac cgcgaactgt ataaaccaga tgaaaaaccg ttagcgatta
      601 tggttccggc atggaatgaa acgggcgtca tcggcaatat ggccgagctg gcggcgacca
      661 cgctcgacta cgaaaactat catatctttg ttggcaccta ccccaacgac cccgatattc
      721 agcgtgatgt tgacgaagtg tgcgctcgct tcccgaatgt gcataaggta gtctgcgcgc
      781 gtcctggccc caccagcaaa gccgactgtc tgaacaacgt gctggacgcc atcacccaat
      841 ttgagcgtag cgccaatttc gcttttgctg gttttattct gcatgacgcc gaagatgtga
      901 tttcaccgat ggaattgcgt ctgttcaact atctggtcga gcgtaaagat ctgattcaga
      961 tcccagtgta tccgttcgaa cgcgaatgga cgcacttcac cagcatgact tacattgatg
     1021 agttttcaga actgcatggc aaagatgttc cggtgcgtga agccctcgcc ggacaagtgc
     1081 ccagcgcagg cgtcggcacc tgtttcagcc gccgcgccgt gaccgcactg ttagctgacg
     1141 gtgacggtat tgctttcgac gtgcagagtc ttactgaaga ttacgacatt ggcttccgcc
     1201 tgaaagaaaa aggtatgacg gaaatttttg tccgttttcc ggtggtggac gaagccaaag
     1261 aacgcgagca gcgtaaattt ttacagcacg cacggacgtc aaacatgatc tgcgtgcgcg
     1321 aatatttccc cgataccttt tcgactgcgg ttcgacaaaa atctcgcagg atcatcggca
     1381 ttgttttcca gggctttaaa acccataaat ggacctccag cctgacgctg aactactttc
     1441 tctggcgcga ccgcaaaggg gcaatcagta actttgtcag cttcctcgcg atgctggtga
     1501 tgctccagct tttgctgttg ctggcgtatg aaagtttgtg gcccgatgcc tggcatttcc
     1561 tttctatttt tagcggcagc gcatggttaa tgaccctgct gtggctaaac tttggcttga
     1621 tggttaaccg catcgtgcag cgggtgattt tcgtcactgg ctactacggt ctgacgcagg
     1681 ggctgctatc tgtcctgcgt cttttctggg gcaacctgat taacttcatg gccaactggc
     1741 gcgcgctaaa acaggtactt caacacggcg atccacgtcg cgtgggataa aacaacgcat
     1801 gacttcccca gcgtgactgg cgatacccgc tcgttgcgcc cgttaggcca aattctgctg
     1861 gaaaatcagg tcatcactga agaacaactc gatacagcac tgcgtaatcg cgtcgaaggt
     1921 ctacgcctgg gcggttcaat gctgatgcag gggctgatta gcgccgagca gctggcacag
     1981 gcgctggcag agcaaaacgg cgtggcgtag gaatccatcg atgcctggca gatcccgtcc
     2041 tcgctgattg ccgaaatgcc ggcctccgtg gcgctgcatt atgcggtact gccgctgcgt
     2101 ctggaaaatg atgagttaat tatcggcagt gaagatggta ttgacccggt ttcgctggcg
     2161 gccctgacgc gtaaagtcgg acgcaaagtg cgttacgtca ttgttctgcg gggacaaatt
     2221 gtcacagggt tacgtcactg gtatgcacgc cgacgcggta acgatccgcg ggcaatgttg
     2281 tacaatgcgg ttcagcatca gtggctcacg gaacagcaga ccggtgaaat ctggcggcaa
     2341 tatgtgccgc atcagttcct gttcgccgaa atactgacca cgctcggtca tattaatcgt
     2401 tcagcaatta acgtgttgtt attgcgccat gaacgcagtt ctctgccgct cggcaagttt
     2461 ttggtcaccg aaggcgttat cagccaggaa acgttggatc gcgtcctgac aattcaacgc
     2521 gaattacaag tttcgatgca atcactatta ctcaaagcag gtttaaacac agaacaggtt
     2581 gcgcaactgg agtccgaaaa tgaaggagaa taacctgaat cgcgtcatcg gatggtctgg
     2641 tttactgctg acgtctttat tgagtaccag cgcactcgca gacaatatcg gcaccagcgc
     2701 agaagagctg gggctgagcg attatcgcca ttttgttatt tatccccgtc tcgataaggc
     2761 gctgaaggca cagaaaaata acgacgaagc aaccgccatc cgcgaatttg aatatataca
     2821 ccagcaggtg ccggataata ttccgctgac tttatacctt gcggaagcct atcgccattt
     2881 tggtcatgat gaccgggcgc ggctgttgct tgaggatcaa ctgaaacgtc acccaggaga
     2941 tgcccgactt gagcgcagtc tggcggctat tccggttgaa gtgaaaagcg ttacaactgt
     3001 tgaagaactg cttgcccagc aaaaagcgtg cgatgctgcg ccgaccctgc gttgtcgcag
     3061 tgaagtcggg cagaatgccc tgcggctggc acagttacct atcgccagag cgcaactgaa
     3121 cgatgcgacg tttgctgcat cgccggaagg aaaaacgctg cgaaccgatc tgctgcaacg
     3181 ggcaatctac ctgaaacaat ggtcccaggc agatacgcta tacaatgaag cacgccagca
     3241 gaacacatta agcgcggcag aacgccgtca gtggattgac gtgcttcttg ccgggcaact
     3301 ggacgatcgg atcctggcac tgcaatcaca ggggatcttc accgatcctc agtcatatat
     3361 tacttacgcg accgcgctgg cttatcgtgg cgaaaaagca cgcctccagc attatctcat
     3421 tgaaaataag ccgctgttta ccacggacgc acaagagaaa agttggctct atctgttatc
     3481 taaatacagc gccaaccccg ttcaggcatt ggcgaattat acggtgcagt ttgccgataa
     3541 ccgccagtat gttgttggcg cgacgctacc ggtgctgtta aaagaaggtc agtacgacgc
     3601 agcgcaaaaa ctgctcgcca ccctccccgc caatgaaatg cttgaggagc gttatgctgt
     3661 cagcgtggcg acccgtaaca aggctgaagc tctgcgtctg gcacgcttgc tgtatcagca
     3721 agaaccggca aatcttaccc gcctggatca actgacctgg caactgatgc agaacgagca
     3781 gtcacgggaa gctgccgatt tattgctgca acgctatcct ttccagggcg atgcgcgtgt
     3841 cagccagact ttaatggcgc gactggcgtc tctgctggaa agtcatcctt acctggcaac
     3901 gccggcgaag gtggcgattt tatcgaaacc cttaccgctg gcggagcaac gtcagtggca
     3961 aagtcagttg ccgggtattg cagataattg cccggcaata gttcgcttgc tgggcgatat
     4021 gtcgccttcc tacgatgccg ccgcctggaa ccgtctggca aagtgttatc gggacacgct
     4081 acccggtgtg gcgttgtatg catggcttca ggccgaacaa cgacaaccga acgcctggca
     4141 acatcgtgcg gtagcctatc aggcgtatca ggttgaggac tacgccaccg cactggcggc
     4201 ctggcagaaa atcagtcttc acgacatgag caatgaggat ctgcttgctg ctgccaatac
     4261 cgcccaggcg gcaggaaatg gtgcggctcg cgatcgctgg ctacaacagg cagaaaaacg
     4321 tggactggga agcaatgcgc tctactggtg gctgcatgcg caacgttaca ttcctggtca
     4381 gccggaactc gcactgaacg atctcacgcg ctcaatcaat attgcgcctt ctgccaacgc
     4441 ttacgttgcg cgggcgacaa tttatcgcca acgtcataat gtcccggcgg cggtgagtga
     4501 tttgcgcgcc gcgctggaac tggaaccgaa taatagcaac atccaggcag cgcttggtta
     4561 cgccttgtgg gatagcggtg atatcgcaca gtcgcgggaa atgctcgaac aggcgcataa
     4621 agggcttccg gacgatccgg cactgatccg acaactggcc tacgtgaacc agcgtctgga
     4681 tgacatgcct gcgacgcagc actacgcccg gctggtgatt gatgacattg ataatcaggc
     4741 gctgataacc ccattgacgc cagaacaaaa tcaacaacgc ttcaatttcc gccgtttgca
     4801 tgaggaggtc ggtcgccgct ggacgttcag tttcgattct tctatcggct tgcgttccgg
     4861 cgcaatgagt accgctaaca ataatgtcgg cggcgcagcg ccagggaaaa gctatcgtag
     4921 ctacggacaa ctggaagccg agtaccgcat cggacgcaat atgctgctgg aaggcgacct
     4981 gctctcagtt tatagccgcg tctttgacga taccggagaa aacggggtga tgatgccggt
     5041 gaaaaatccg atgtccggca ccggtctacg ctggaagccg ctgcgcgatc agatcttttt
     5101 cctcgccgtc gaacagcagt tgccgctgaa cgggcaaaat ggcgcatccg ataccatgct
     5161 gcgtgccagc gcctcattct ttaatggcgg caaatacagc gacgaatggc acccgaacgg
     5221 ttcaggctgg tttgcccaaa acctgtacct cgatgcggcg caatatatcc gccaggatat
     5281 tcaggcgtgg acggcagatt atcgcgtcag ctggcatcag aaggtagcta acggacagac
     5341 tattgagcct tacgctcacg ttcaggacaa cggctatcgt gataaaggca ctcagggcgc
     5401 gcagcttggc ggtgtcgggg tccgctggaa tatttggacc ggcgagacgc actacgacgc
     5461 ctggccgcac aaagtcagtc tcggcgtcga gtatcaatat acctttaagg cgattaatca
     5521 acgtaacgga gagcgcaaca acgcgtttct caccattgga gtgcactggt aaatgcgtaa
     5581 gttcattttc gtattgctga cactgctttt ggtcagccct ttttcctttg cgatgaaagg
     5641 tattatctgg caaccacaaa accgagatag tcaggttacc gatacccagt ggcaggggct
     5701 gatgagtcag ttacgtttgc aaggcttcga taccctggtt ttgcaatgga cccgttacgg
     5761 cgatgcattt actcagccag aacagcgcac gttattgttt aagcgtgccg cagctgcgca
     5821 acaggctggc ctgaagctga ttgtcgggct gaacgccgat ccggaatttt ttatgcacca
     5881 gaaacagtcg tccgcagcgc tggaaagcta tcttaatcgc ctgctggctg ccgatctcca
     5941 gcaagccaga ttatggagcc ccgcgcctgg cgtaacgccg gatggctggt acatcagcgc
     6001 ggaaattgac gacctgaact ggcgcagcga agccgcccgt cagcctttgc taacatggtt
     6061 aaacaacgcg cagcggctga ttagcgatgt ttcagcaaaa ccggtttata tcagtagttt
     6121 tttcgccgga aacatgtcgc cagatggcta tcgccaactg ctggaacacg ttaaagcaac
     6181 cggcgttaat gtctgggtac aggatggcag cggcgtggat aaactgaccg ctgaacagcg
     6241 tgaacgttat ctacaggcca gcgccgattg ccaaagtccc gcccctgcca gcggcgttgt
     6301 ttatgaactt tttgtcgccg gcaaaggcaa aacctttaca gcgaaaccga aaccggacgc
     6361 agaaattgcc tcgctgttag cgaaacgttc ctcttgcggt aaagacacgc tctatttctc
     6421 tctgcgctat ttgcccgtcg cgcacggcat tctcgagtat taaatctcct ccaggtaagt
     6481 cgggtacgac ctggcttacc tctttcgctc tcgtcagaat tccatcaaga ttaattgcta
     6541 aaaagcgtgc taaagaaaga agatcgttat cggcgaacgg gccgatcact catgcaggaa
     6601 gcatagatcc tttgagcgga gtttctgata tctgaggagt gcgaaatgca attgagcagc
     6661 agtgaacctt gcgtggtgat cctgaccgaa aaagaggtag aggtaagcgt caataaccat
     6721 gctacgttta cccttccgaa aaactacctg gccgccttcg cgtgcaacaa taacgtcatt
     6781 gaactctcaa cgttaaatca cgtattaatc acccacatca accgtaacat catcaacgat
     6841 tatctgttgt ttttaaataa gaacttaacc tgtgtaaagc cctggtcgcg gctggctacc
     6901 ccggttatcg cttgtcatag ccgtacaccg gaagtgttcc ggctagccgc caaccacagc
     6961 aagcagcaac ccagcaaacc ctgcgaagcg gagttgacgc gcgcattgct ttttaccgta
     7021 ttgtctaact ttcttgagca atcgcggttt attgccctac tgatgtatat cttacgcagc
     7081 agcgtccgcg acagcgtctg ccgcattatt caaagcgata ttcagcatta ctggaatctg
     7141 cgaattgtcg ccagttcgct atgtttaagc cccagcctgc tcaaaaagaa attaaaaaac
     7201 gaaaatacca gctatagcca gattgtcaca gagtgtcgta tgcgttacgc cgtacagatg
     7261 ttattgatgg ataacaaaaa tatcactcag gtggcgcaat tatgtggcta tagcagcacg
     7321 tcgtacttta tctctgtttt taaggcgttt tacggcctga caccgttgaa ttatctcgcc
     7381 aaacagcgac aaaaagtgat gtggtgaagg gtaaagcgga aacggataag acgggcataa
     7441 atgaagaaga aatggcgcgc cctgcaggat tcgaacctgc ggcccacgac ttagaaggtc
     7501 gttgctctat ccaactgagc taagggcgcg ttgataccgc aatgcggtgt aatcgcgtga
     7561 attatacggt caacccttgc tgagtcaatg gcttttgatc tggttgctga acaagtgaac
     7621 gaccgcgtct gattttctga tttatttcgc tatagcggca aacaaacgca caccgctgcg
     7681 cgtctgaatc aagaaaaccc gtattttcat gtatcaaagt acaatttacc gccctaacgg
     7741 aaaattgtcc gctcctatga gactggtaac tatgaaacca acgtcggtga tcattatgga
     7801 tactcatcct atcatcagaa tgtctattga agttctgttg caaaaaaaca gtgaattgca
     7861 gattgtcctg aaaacggatg attaccgcat aaccatcgat tatctccgaa cccgtcctgt
     7921 tgatttaatc attatggata tagacttgcc cggaacagac ggttttacct tcctgaaaag
     7981 gatcaaacaa atccagagca cagtgaaagt gttattttta tcatcgaaat cagaatgctt
     8041 ttatgctggc agagcgatac aagctggtgc taacggtttt gtcagtaaat gcaatgatca
     8101 gaatgatatt tttcatgccg ttcagatgat cctctccgga tacacgtttt ttcccagcga
     8161 aacgcttaac tatataaaaa gcaataaatg tagtacgaat agttcaacgg tcactgtgct
     8221 atctaatcgt gaagtgacca tattacgtta tctggttagc ggattatcta ataaagaaat
     8281 tgccgataag ttattactta gcaataaaac agttagcgcg cataaatcta atatttatgg
     8341 caagctaggt ttgcattcaa ttgtagagct tatcgactac gccaaattat acgaattaat
     8401 ataatattaa ttataattga tcataaatat cgcatccgct ttcgccacac ctggccgaac
     8461 accgctggct aacgctcgat aattggcaaa aaagtttagt gtgacattgc cgtttgcatc
     8521 tacttcctca gtcgggctcg cctcccccag tgcgagccgg gagcgatcgc tattacgtaa
     8581 ttcgatggcg acggtttgcg ccattgcggg atcatccaga gccagcaggt tggtatcgga
     8641 tgccggcgtt ctcgtaaata aaatcgcaac tgaacccgga ggacatccct ccagccgcag
     8701 gctaaaaggg acgagtgccg tggtatcgcc agcgttcagt aattgtgtcg taggccatct
     8761 gcctaaatct accgtcttat caatatccgc tgtgtttact gtacaggaga aatcaacaac
     8821 gttaccgtgc aaattgatat taatcgttcc taaagggtca gttgcccatc cactggaact
     8881 ccacagtaac ccgcagaaac agctaaagaa tactcttctc attctccgta cctcattgat
     8941 aatcgacgcg taaatacccc agcgcgctaa acggcccttc ggtcggtttt tgaccggtaa
     9001 tactgatagg ccaggcgcga agtgtgacat tggctgccgc agctgcatcc agacggaaag
     9061 gaataacgct attgagatcg ttaggcgtga tcggcgtatc gttctgatcg gcgacaataa
     9121 aacctaaatc ctgattgtcc gacaccatcg cctgacctga aacggcactg gcttccagac
     9181 gcattgataa ataagcctgc gcagcaacat tcgtacattt gatcgcaatg ctcttggttt
     9241 gcggcatgac accagcaggt cgattacccg gccctgccgc actaaataac gatgcgccga
     9301 tatcaccaaa atcaaattca acaatttgcc cggcatttaa ttcgcagttt tgcggtactt
     9361 caacccggcc accaaaacta atggtataaa caggtgtaac caacggatcg taaggcgttg
     9421 atgtcacata cacggtaaac atcacctgtc tggggatctc caccatgtta ataaagggcc
     9481 gaataacctt taaacgaaat atcaaacgag aatccatcac cccgaacgga aggttttgcg
     9541 aaacgttagg atctgttccc atacgaatat aattttgcgg aggaaattga atatccatca
     9601 cgctatcaac cagactcatc gcacctaata gataatcatt taattgcata tatttataat
     9661 tatcgatagt ttcctgaaca ataaagttgg tgacataact acggtatgta taattcacca
     9721 gcgtgccggg tggacaaatt gctgacacac ctacccagcc ggatttttcc ggtaaaacaa
     9781 caatctgccc tggctggtta ttggtgctat taaagacatt tgagagatca tagtgttcat
     9841 cttctgctac gccagtacta tttgcacaaa cagtagccca ggatatgttt gccagacaca
     9901 aacatgccat tgccaataat aatctgcaga ttatcttcat tgataatttc ctttatgagc
     9961 caggatgtgt gcaaactgcc gaaataacag tgacggcttg ctgtaagctt tgcttcggca
    10021 atacatagtg cgcaatgcag cgtgagttcg cgccgtctcc ccactgaacc agtaattcac
    10081 cagacaatgg cgcaccactt aaataaactt gcccgtcatc acccaccata ctggttattc
    10141 cggtactgtt ttcccgtacc agtgatccaa acggcaccgg ttttccgccc tgggtaacgg
    10201 taatgagcgc ccgcacgcct atgcgggtat caaaattggc acgaaccaac gcgccttgcg
    10261 tcggcacaac gctgctaata tttttttcaa catcgatgga attccccatc gtattggtat
    10321 caagcgcgat acggttatac cgataaaccg aggcatacgg catcaccgca tagccgcgcc
    10381 agtcggttaa aatgccagtt tgattttcaa tgcgtacacc gcctgcgcca ggcgctttaa
    10441 tcaaaacatt ggtatcccct aaaggctggc tcagcgttat gccattttcg tgcccgacca
    10501 caccgccaga cagctgccag ttaacgtcat gttgatcgcg gtcgtagtta tacccgaccc
    10561 ccagcgtacc gtaagcggcc tgccagtttg ccgtggcgct gcccgtatac ccattattcg
    10621 aggtatcacc ctggcttacg tgataactca agttgtggcc ttccagtaag gtcccaccta
    10681 cacctgccag ccagctattt tgcccgttgc tgttacggtt ggcgttaaag gaggcataag
    10741 cgcggtcgag cgcattttcc cgggtgtagc gacgtttggt ctgaacattg aaaggcactg
    10801 aaacattaag tccgacaata cgttcgttat cggggatccc tacagattca ttccacgaaa
    10861 atgagagtga ataactgatg ccaacccagc tgctggtata ccccacctga taccaggtat
    10921 ctgaatccga agtattccag tatttttgat gggtaccaga gatataaagc gagccaaagt
    10981 cattaagtga ttgtgaaata tttaactgca aacggtcttt acggctaaag cgtaaattgt
    11041 ggtaattcac gattatcggt tcatcccgat gctcaccgtc gtaatcgtaa tcatattcgt
    11101 acccctccat tcgacgatac gcaacatcat caagggtata aaaaccttgt gtcgaatagc
    11161 ggtaacccat taactgaaaa ttggtgccga aggtgttcat cgatttcgca tagaggaagc
    11221 gaatggaatc cccctcatga cgactgtcgt cggctaactg actgcgcgca tgggtcacat
    11281 ccagcgacac tgccccccag tttccgagat tgcgccccag tcctaataaa aaggcggtgt
    11341 aattggcaga taattgcgtc ccgccgtagg cagtaaattc ctgtggtaaa ccgccgagtg
    11401 ccgtgccctg aaaaaagaaa ggtgatgatt gctgactatt accgctacga aaatcgcccg
    11461 ccgtcaggtc aaatttgaaa cgcccttcgc gttgtaaaat tggcactgtt gaatacggaa
    11521 tagtgtaatt ctgctgattg ccatcgcgtt cgtcgatggt gacgtccaga tcgccatttg
    11581 aagatgtcgg gtgcaaatct gtaatttcaa aagcgccggg ggaaacatag ctttgataga
    11641 taataaaacc attttgccga atcgttagct gggccgccgt acgggcaatc ccacgtaccg
    11701 ttggggcaac cccttgctgg ctatcaggat acatattatc ggaagaataa agccgtacac
    11761 cacgaaatcc aacaccatcg aaaatatcac ttcctgtatt gccgtctccc attaccagtt
    11821 cacttttcag cggaataatg gcgcgctgta cccaggtgcc aatattattc cactgttctg
    11881 aatgatatcc atttccgcga aaatagttcc aggaaccatt gttgcgtaaa cgccacgggc
    11941 caatattaat cccgctgagc tcactaaaaa aatagctatc gttaccatta cctctgttac
    12001 cggtgaaatt ataattcagg agtaaagcag gaataccttc atcccactct tcaggcggaa
    12061 tgtaaccgtg agcgctactc aacagcgata tctgaggaat agtgatgttc aggcgcatcg
    12121 ctgcaaaatc aaagttaatt gtggcatcag gtacagcttt cagtaaattg atgcatttat
    12181 tgttttgctg ctgggctaac tcgggaaatg cactgctatt aaggccaatt cgttcaagga
    12241 gtacctggtt aaaacagggc attaacccac ctgatttatc acctgtattt tctgttgtcg
    12301 attcaaatac gatatcctgt gaaccaatga actcatcatt acgccagaga tccacccgat
    12361 acacgcccgc aggttgatga ttacctctct caaagcgaga taaatcagca acggatgtgc
    12421 cattctctaa taaaaatgcc gggttgaaat aactttccgc atagcttaaa aaggagggta
    12481 aaatggcaag agatgaataa caaattccgg ccagacacca ggtatacctc tgcggaatat
    12541 ccgtagtagt gggtattttc ataattagct ctgatattgt cagatgattc ggttagttta
    12601 agttcacttc tctgaccggg gttactgaac cataatcatt aacggtctga aatttcagct
    12661 ttccctgcac tcctgagggt aagggaattt gtgaactaac tctgggtgcc gccatagcat
    12721 tccccaactt ttggctgccc acttgcaggt taacgagggt gacataaaaa ggtgatggat
    12781 tatgaacatt gatatagtta ccggatcgcg aaaacttgag tgtgtccggc gcttctgcgg
    12841 gtaattcttg taattgaatt ggacggagaa ataatttcat gcgcgataaa atcgccagtt
    12901 gcaaaacatt cctgccgttc aatgcatttt tatctaccga agggatcgtc ttaacattca
    12961 tccagaacag agactcacga tctgccgcca gcggtggacc ggtgtaaata atacgcaaag
    13021 tattttcgct tttgggttca ctaacaaata gtggcggtgt aatgatgaat gacttttctt
    13081 ttacaccgct gctgttttca atccacgaat tgaccagaaa gcgctcattg gtatggctat
    13141 ttttaatcca taccgcagtc tgtttagcat cagcgggata aataatacgc gtggcaccta
    13201 atgcgatccc tccggcagca tgggcgctgg ccgaaatgat taaataaaat atcatgagca
    13261 tcaataactt tattttagtc atcatagtta atacgccttg tgtattcctg acggcaaaaa
    13321 taaggagtat aaagaaatga ttgctttggc ttcttacaac acatcattcc cttttcattt
    13381 aataaagcgg catgatacaa agtgaacgtg gtttcgattt acattgccac cataccgctt
    13441 cagacaaccg gtacattact ttgttataag acgtgatata taattcaaaa caacgtggtt
    13501 ttgattattc gtatctcata ataaaagtcg cgtcagcatt tgcttgccct gctgatgcac
    13561 ttgtaccggt gcctttataa cgtgcagaaa aatgaagaac gttggtcccg gggatcaagt
    13621 tctggttggt tgagaagcta ttcccatcag gtttgagaat tgcggatgta ttatcaagta
    13681 tttcaatacc gacacccgtt gctgttgttg tattggtact ggatgcaatg gccaataaat
    13741 tatcattgat tgcatcagcc tgaccagaaa atgcaacggc agcattagcg gcaacaacag
    13801 gatcgcagtc gttcaactga atggtgaatg gaattaatgc agaggtatta ccaacagcat
    13861 tgaaaatatc ggtacgatat tgaccgagtg tgacaacctg gtctgccgag tcagtattca
    13921 ctgaacaggc agcattcacc agttcgcctt caaagtgaat tgtaccgcca tctacaacgg
    13981 cagcataact acccgtagcg gcgaatagtg cggcagccag cgcagacgaa ataaatctta
    14041 atttcatata tattccttca atctcattta tcgactccac atccgtatat aaccgattac
    14101 tttatttaag acactgatag tagtaaaatt cctttttatc ctctaagaat gtcttaattg
    14161 aaaatatgca ctctattcta aaaaatagag agccccgtta gatgaatact tccgcgcaaa
    14221 atatattcaa cacaaatata gacctgaagc ggtaaattac caggctgaaa attcttttta
    14281 tattgtcagg tatttcttaa attatcttaa tccttaaaca aggaaataaa tcagttccag
    14341 atttacaacg ccatcatgga cgaaaaatga agctttcaat ctcagcgacc tcagcgacgg
    14401 tgcgcctaac cttcgcaaga ggtcgcttca cgcgataaat ctgaaacgaa acctgacagc
    14461 gcgccccgct tctgacaaaa tagacgcatc cccttcgacc tacgtaacag atggaatcct
    14521 ctttctgatg gcagcaaaga ttattgacgg taaaacgatt gcgcagcagg tgcgctctga
    14581 agttgctcaa aaagttcagg cgcgtattgc agccggactg cgggcaccag gactggccgt
    14641 tgtgctggtg ggtagtaacc ctgcatcgca aatttatgtc gcaagcaaac gcaaggcttg
    14701 tgaagaagtc gggttcgtct cccgctctta tgacctcccg gaaaccacca gcgaagcgga
    14761 gctgctggag cttatcgata cgctgaatgc cgacaacacc atcgatggca ttctggttca
    14821 actgccgtta ccggcgggta ttgataacgt caaagtgctg gaacgtattc atccggacaa
    14881 agacgtggac ggtttccatc cttacaacgt cggtcgtctg tgccagcgcg cgccgcgtct
    14941 gcgtccctgc accccgcgcg gtatcgtcac gctgcttgag cgttacaaca ttgatacctt
    15001 cggcctcaac gccgtggtga ttggcgcatc gaatatcgtc ggtcgcccaa tgagcatgga
    15061 actgttgctc gcaggttgca ccactaccgt gactcaccgc ttcactaaaa atctgcgtca
    15121 tcacgtagaa aatgccgatc tgttgatcgt tgccgtcggt aagccaggtt ttattcccgg
    15181 tgactggatc aaagaaggcg caattgtgat tgatgtcggc atcaaccgtc tggaaaatgg
    15241 caaagttgtg ggcgacgtag tgtttgaaga cgcggctaaa cgcgcctcat acattacgcc
    15301 tgttcccggc ggcgttggcc cgatgacggt tgccacgctg attgaaaaca cgctacaggc
    15361 gtgcgttgaa tatcatgatc cacagggtga gtaacatggc gacgttttct ttaggtaaac
    15421 atccgcacgt tgagctgtgc gacttgctga aactggaagg ctggagcgaa agcggcgcgc
    15481 aggcgaaaat cgcgattgcc gaaggccagg tgaaagtcga cggtgcggtt gaaacgcgca
    15541 aacgctgcaa aatcgtcgcc ggtcagacag tgagttttgc aggacacagc gtacaggttg
    15601 ttgcctgatc cctttcccgg cctgtatcaa caggccggtt ctcttttcag acttttgccc
    15661 tctacgcccc gttcatccat gctgatagca tcgacatttt gccgaagcga ccatcatgcc
    15721 aaccgttatt acgcacgccg ccgttcccct atgcattggt ttagggttgg gttcgaaagt
    15781 catccctccg cgtctgttat ttgccggaat catcctggcg atgctgcccg acgccgacgt
    15841 attgtcgttt aaatttggca ttgcttacgg caatgttttt ggtcatcgcg ggtttaccca
    15901 ttcgctggtg tttgcgtttg ttgtcccgct gttatgtgtg ctgattggac gccgatggtt
    15961 cagggctggg ctgattcgct gctggctgtt tttaaccgtc tcgttgctat cgcacagcat
    16021 gctggattcg gtaaccactg gcggtaaggg tgttggctgg ctgtggccgt ggtcagatga
    16081 acgctttttc gctccctggc aggtgattaa agtcgcgccg tttacgttgt ctcgttacac
    16141 cacgccgtac gggcatcagg tgattatttc tgaattgatg tgggtgtggt tgccgggaat
    16201 gctactgatg ggaatgttgt ggtggcacag acgataaccg gatgcaaaaa ctcgcatccg
    16261 gcaatagcgc aattacttac gacgccaggt ggtcccttgc gggccatctt ccagcacgat
    16321 ccccatctcg ttaagacggt cacgcgccgc atctgccgcc gcccagtctt tcgctttacg
    16381 ggcatccaga cgctgttgaa ttaacgcttc aatctcagcc acttcgctgt cgtctgcctg
    16441 cgcgccgctt tgcaggaacg cttccggttc ttgctccagc aggcccaata cagcggaaag
    16501 tttacgcagg tgagatgcca tagcattcgc cgctgccata tcttctgctt tcagacggtt
    16561 cacttcacgc gccatatcaa acagcacgga ataggcttcc ggggtgttga aatcgtcgtc
    16621 catcgcttca ataaagcgcg cttcaaacgc ttcgccaccg gcaggcgcaa cggttttatc
    16681 tgtgccgcgc agcgcagtgt agaggcgctc cagcgccgca cgcgcctgct tcaggttctc
    16741 ttcgctgtag ttcagctggc tgcgatagtg gcccgacatc aggaagtaac gcacggtttc
    16801 ggcatcgtag tatttcagca cgtcacgcac ggtgaagaag ttacccagcg atttggacat
    16861 cttctcgcgg tcaaccatca ccatcccgga gtgcatccag tagtttacat actgaccatc
    16921 atgggcacag gtggactgtg cgatttcatt ctcgtggtgc gggaacatca ggtcagaacc
    16981 gccgccgtgg atatcaaagt ggttacccag ctgcttgcag ttcattgccg aacattcaat
    17041 gtgccagcct ggacggcccg cgccccacgg agacggccag ctcggttcgc cctctttcga
    17101 catcttccac agaacgaagt ccatcgggtt gcgtttgtcg tcgaccacgt caacgcgcgc
    17161 gcctgcctgc agctggtcga gatcctgacg cgacagcacg ccataagttg gatcggtcgg
    17221 gacgtcgaac atcacgtcgc cgttgtccgc cacataagcg tgacctttgg cgatcagttg
    17281 ttcagtgagt tcaataattt ctgtgatatg gtgcgtcgcg cgcggctcca tatccgggcg
    17341 cagaatgttc aaagcatcaa aatctttgtg catttcggcg atcatgcgat ccaccagcgc
    17401 cacaaagctt tcgccatttt cattggcgcg tttgatgatt ttgtcgtcga tatcggtaat
    17461 gttgcgcaca tacttcagct tatagccgag gaaacgcaga tagcgcgcaa ccacgtcaaa
    17521 agcaacaaag gtacgcccgt gaccgatatg acagagatcg taaacggtga ttccacacac
    17581 gtacatgccg acttccccgg cgtgaatagg cttaaattcc tctttttggc gtgtcagagt
    17641 attgaagatt tttagcatcg aagattccgt ttagacatgt gtgggtaatt gagttgcgta
    17701 taatacccat atttcccgcg cgaatcagca tacattgcgt gatgatccga tcgtgcggtt
    17761 atgctataac accaccctat atatgacccg aaccgggttg aagcaccaat caaacggaac
    17821 aggatgcaaa aatggttact ttccacacca atcacggcga tattgtcatc aaaacttttg
    17881 acgataaagc acctgaaaca gttaaaaact tcctggacta ctgccgcgaa ggtttttaca
    17941 acaacaccat tttccaccgt gttatcaacg gctttatgat tcagggcggc ggttttgaac
    18001 cgggcatgaa acaaaaagcc accaaagaac cgatcaaaaa cgaagccaac aacggtctga
    18061 aaaatacccg tggtacgctg gcaatggccc gtactcaggc tccgcactct gcaactgcac
    18121 agttcttcat caacgtggtt gataacgact tcctgaactt ctctggcgaa agcctgcaag
    18181 gttggggcta ctgcgtgttt gctgaagtgg ttgaaggcat ggacgtggta gacaaaatca
    18241 aaggtgttgc aaccggtcgt agcagtatgc accaggacgt gccaaaagaa gacgttatca
    18301 ttgaaagcgt gaccgttagc gagtaatcgt ggcgacactc tttattgcag atcttcatct
    18361 ctgcgtggaa gaaccggcga tcaccgccgg ttttctgcgt tttttagcgg gggaagcccg
    18421 caatgccgac gcgctgtata ttcttggcga tctgtttgaa gcgtggattg gcgacgacga
    18481 tcccaaccca ctccatcgcc agatggcggc agcgatcaaa gcagtgtccg attccggcgt
    18541 tccctgttat ttcattcatg gcaaccgtga ttttctgctc ggcaaacgct ttgcccgtga
    18601 aagcggcatg acgttattgc cggaagaaaa ggtgctcgaa ctttatggtc gtcgggtgtt
    18661 gattatgcat ggcgacacgc tgtgcaccga tgacgcgggt tatcaggctt ttcgcgccaa
    18721 agtccacaaa ccctggctgc agacgctatt cctcgctctg ccattgtttg tgcgcaaacg
    18781 cattgccgcg cggatgcgcg cgaacagcaa agaagccaac agcagtaaat cgctggcgat
    18841 catggacgtt aaccaaaacg cggtggtcag tgcgatggaa aaacatcagg tgcaatggct
    18901 gattcacggg catacccatc gcccggcggt acatgaactt atcgccaacc agcaacctgc
    18961 ttttcgcgtg gtactgggtg cctggcatac ggaaggttcg atggtgaaag tcacggcgga
    19021 tgacgttgag ctgattcatt ttccgtttta aaaaaaccgc aactttgctg atttcacagc
    19081 cacgcaaccg tttcccttgc tctctttccg tgctattctc tgtgccctct aaagccgaga
    19141 gttgtgcacc acaggagttt taagacgcat gtcttcccgc aataatccgg cgcgtgtcgc
    19201 catcgtgatg gggtccaaaa gcgactgggc taccatgcag ttcgccgccg aaatcttcga
    19261 aatcctgaat gtcccacacc acgttgaagt ggtttctgct caccgcaccc ccgataaact
    19321 gttcagcttc gccgaaagtg ccgaagagaa cggttatcag gtgattattg cgggcgcagg
    19381 cggcgcagcg cacctgcctg gcatgattgc cgccaaaacg ctggtgccag tgctgggcgt
    19441 gccagtacag agcgccgcac tgagcggtgt cgatagcctc tactccatcg tacaaatgcc
    19501 gcgcggcatt ccggtgggta cactggcgat tggtaaagct ggcgcggcaa acgcggcgtt
    19561 actggcagca caaattcttg caactcatga taaagagcta caccagcgtc tgaatgactg
    19621 gcgcaaagcc cagactgacg aagtgctgga aaacccggac ccgcgaggtg cggcatgaaa
    19681 caggtttgcg tcctcggtaa cgggcagtta ggccgtatgc tgcgtcaggc aggcgaaccg
    19741 ttaggcattg ctgtctggcc ggtcgggctg gacgctgaac cggcggcggt gccttttcaa
    19801 caaagcgtga ttaccgctga gatcgaacgc tggccggaaa ccgcattaac ccgcgagctg
    19861 gcgcgccatc cggcctttgt gaaccgcgat gtattcccga ttattgccga ccgtctgact
    19921 cagaagcagc ttttcgataa gctccatcta ccaaccgcac cgtggcagtt acttgccgat
    19981 cgcagcgagt ggcctgcggt gtttgatcgt ttaggtgagc tggcgattgt taagcgtcgc
    20041 actggtggct atgacggacg cggtcaatgg cgtttacgcg ccgatgaaac cgaacagtta
    20101 ccggcagagt gttacggcga atgtattgtc gagcagggca ttaacttctc tggcgaagtg
    20161 tcgctggttg gcgtgcgcgg ctttgatggt agcacggtat tttatccgct gacgcataac
    20221 ctgcatcagg acggtatttt gcgcaccagc gtcgctttcc cgcaggccaa cgcgcagcag
    20281 caggcgcagg ccgaacagat gctgtcggcg attatgcagg agctgggcta tgtaggcgtg
    20341 atggcgatgg agtgttttgt cacgccgcaa ggtctgctga tcaacgaact ggctccgcgt
    20401 gtgcataaca gcggtcactg gacacaaaac ggtgccagca tcagccagtt tgagctgcat
    20461 ctgcgggcga ttaccgatct gccgttaccg caaccggtag tgaatagtcc gtcggtgatg
    20521 atcaacctga ttggtagcga tgtgaattat gactggctga aactgccgct ggtgcatctg
    20581 cactggtacg acaaagaagt ccgtccgggg cgtaaagtgg ggcatctgaa tttgaccgac
    20641 agcgacacat cgcgtctgac cgcgacactg gaagccttaa tcccgctgct gccgccggag
    20701 tatgccagcg gcgtgatgtg ggcgcagagt aagttcagtt aacctggtgc tcatttgatt
    20761 gccggatgcg gcgtaaacgc cttatccggc ttaccgctcc ggtacccatc gtaggcctga
    20821 taagacgcgt caagcgtcgc atcaggcatg gtgcaccgat tgccggatgc tctcatcact
    20881 acagcgaaat acaggtcccc gcttcgcccg ccagcgtctc ttcaatccgc gataacgccc
    20941 cgatccacgc aggtttgcca cggcttctga catagccact caccgcagtc accttcggcc
    21001 ccatcgaacc atcggctttg gcaaatggcg ctaactcatc cggtgtggca tggcgaatgg
    21061 cacgttgctg cggcgttccc cagttttcat ataccgcatc agcatcggtg aggatcacca
    21121 gtccatcggc attaatctgc tcggcgagca acgcagcggc gagatcttta tcaattaccg
    21181 cttcgctccc tgccccgtct ttcgtcacag gcacaccgcc gccgccactg caaatcacca
    21241 catgcccctc tttgagcaac aactcgatgg cttcgctgtc gagaatttta cgcggttgcg
    21301 gagacgccac cacccggcgt aaatatttac catcacgttt catctgccag ccgtaagccg
    21361 cttccagcga ctcttgttct tctggctgat aaaccggacc gataaacttc tctggctgca
    21421 aaaacgccgg atcatcaggc gaaacttcaa tgcgcgtcag caccgtcgtg acaggctgca
    21481 tctgcggctg tgcgctcaag ctctgcgcca gcatatagcc aatcatcccc tggctttccg
    21541 ccaccagcac atccagcgga tacggttcta cctctttcca cgccagattc tgtaacgcca
    21601 gcagccccac ctgcggcccg ttgccgtgaa caatcgccag ccgataagaa cgggccaggc
    21661 gcgccagcgc aggtacagcg ctggcgatat tgcgatattg attttctgcc gtcagcgcct
    21721 caccgcgctg aagcaaggca ttgcccccaa gagctacaac cagtgttttc atggttttcc
    21781 ttgtaataat tgttgaccaa gccagaaccc cagcagcgta tctgcccctg acgtatgccc
    21841 cagcgccagc agcgaatcaa tcgcaacagc ggtacgtttc gggcaactca gagcatgaac
    21901 aaagtgcagg agtggcgagg cgaaatatcc ttgcgcggcg tagcgtaaat aactgacgct
    21961 caccgctgtg gtaacgagtt gaagattgtc ggaacaggca aaaaacgggc gaccggagcg
    22021 cgcatctaaa gcgccataat accaggccgc cagcagcatt ccgctcagcg tgtcatcatg
    22081 acttggcgtt aatcctgggc ctttacccag ccagtgccgc cagtcggtct taatgccatt
    22141 gagcgcggcc tgaaaacagt gacgaaactg gcgtaattca gcaggcagcg gatcgcttgt
    22201 cgccatcgcc agtggcccga aaagcccggt ttcctccgcg cgttgcatcc atgcaactgc
    22261 aagcggttga ggatgtgcag gcggcgtaat acgcagcaaa caataacgct gtggctgttt
    22321 aaccgtgaaa cgcccgaggc gaatcccttg agccacaacc tgtggtcgtt cattgccgca
    22381 taatccaccg cataacgcat cgaattgcgc gcggcgaagc acccatcctc cggggccgaa
    22441 accactaccc tgacgatgca gcgttaacag ttcgccgctt tccgtcatca ggttaatcgc
    22501 ccgtcgccac actcccgcta accgccagga ctggcgataa ttcggtgcac tacggctggc
    22561 aagcagagga tggatgatcg tcattgcgcg ttcctcaacc aatccccatg ctttcagcca
    22621 gtgcttccag cgcctgttca aaacacgcca gcggtgcccg cacggtgcct gcgccaatct
    22681 gcccgatccc cgcctcttta tgggcgatac cggtattgat gagtggcgta atgccggttt
    22741 ctaccacgcg acgaatgtcc agtcccaggc aggcgccctg aaaatcccag cctgggatct
    22801 gcaactgcat attgcgttca aggtaaattt ccgccatctc ttcagatacc gctctggccg
    22861 cttccatgcc acccgcaccg acaaagcgcg ttacgccagg cgctgcgatc attgccgcac
    22921 ctccgatacc aaaggtttcg gtaatcgcgc tatcgcccat atccgggttc gcctgctcct
    22981 gcgagaagcc ggtgaaaaac agaccttgcg gagtgtttac aggcgcagta aaccagcgtt
    23041 cgcccagccc gcttacccga atcccgaaca tattgccgtt gcgggtcatt gccgtaacga
    23101 tgctgcctgc gcagatcatc gcgccagcat ccatcgccgc cttgcagtaa gccatcgcaa
    23161 ggttgaggaa gaactgatcg gtcacgctga ggaaatccat cacttccgcg atgtgctgtt
    23221 tatcatgatc gaggcgagca atttgtgggg ccagcgcacg cattaacagt gctgaggaag
    23281 caatattgcg ttgatggaac tcatcgccca tcgtaatgcc ctgcgccatc atcgccgtga
    23341 gatcgatacc gcgctccatg cgccccagcg ccgcgcttaa tactggcatt aacacatcgc
    23401 gcatccagcg atggcgagtc aggacatctt cgccgtaagc gccaaaacgc atcactttgc
    23461 cgataccttc gttgaggttg cagtacgccc ggttgccgtc ggtcacgttc tcgaccacca
    23521 gcatcggcat actggcagaa gtaatgccgc ccattggccc gacggcattc acatggtgac
    23581 aaggaatgaa gttcacttcc ccctgatcca gcattgccag tgcctgcgct tcatctttcg
    23641 cccagccttc aaacagacat gcgcccacac atgccccttt cattggcccg gtcatctcct
    23701 gccagcgcat tggcggcccg gcgtgaagca gtgttttgcc cgggtgtagt tcgctgataa
    23761 gtgaagaagc cggttgcaca tccagccagt gtggacgagc gcgacgaatt tgttcgataa
    23821 ccgcagcatt ggcttgcgcc actgatgtaa acatgggaac ctcttattgc aaacgttcta
    23881 ataaacgagc cagtttttta ttgccgccgg cgactggcga ccattggtaa tgcacaaccg
    23941 gtttgctggc gctttgtagc gccagcgcaa agctgcgtaa tccgatgtta atcacggcga
    24001 cgttttccag taatgacggt gtgtgttgct gtgtggcaga cgagagcgga tgaattaacg
    24061 ctgccgccag caaggtggct tccggtagcg aactcactac cgcgatcccc gcatcttcca
    24121 gcgtggcgat ttgctgcgag cggcattgcg ggtcacgttc ggtacctgtc accgtggcaa
    24181 tggcgtacag cggttggctg tctgaacgcg cggcacaggc tttttgccag gcgctcacca
    24241 gcgaggcagc aggatcggcg gtcgcaccga agccaatcac gacatcaagc agcaacacgc
    24301 gcacttgcgg tttagcgccg agatcggcaa ttaactggtt gcgtaaggtt gggtcgatca
    24361 tcggatgggg acgcccgacg gtgtagaaat catcgccgag gtcaataatc tggtggccat
    24421 cggcgtccag catcatgcca tgttgatggg tatcgtcggc ttccacgcca aggtgcccgg
    24481 caagtaatcc cgccgcttcg gcagccagcg taccgccggt atacaaaccg caaataaatc
    24541 cgctgctgac aggcgctatt gcgttacgtc gcgccgtgac gcgtgaaagc aggcaagcca
    24601 ggcgtgcggc ctcatccagc gaggaggcaa accagacatt ctcgtcgcgg gccaccgccg
    24661 gggtataacc taaaaacagc gccaccgtcg gtttgccggt tgctttcatg gcattaacaa
    24721 ttttcagacg cacagcttcg gcaggtggtt ttgaaacaaa tgccagcact tcgcttttcg
    24781 cgtcggcgct taacatttcc agcgccgtta gcgcactgat gccgcccact tcacggctga
    24841 ggtcgcgccc gccaaggcca atcgcgtgag taattccctc ccctgccagc gcaatctgcg
    24901 aacacagctc ctgaatcccg gtaccggaag cgccaatgac gccaatgttg ccttccggca
    24961 tcacgttagc aaaagccagc ggcgtggcgg caatcatcga cgtaccacag tccggcccca
    25021 tcaccagcaa gcctttttcc cgcgcgcggg ttttaagttg gatttcatct tccagcgtga
    25081 cgttatcgga gaacatcatc acgttgaggt tgcgatccag cgcctggttc gccagctccg
    25141 ccgcatactc gccagccact gaaatcagca ccagattggc atcgggtaat ttctgacagg
    25201 cactgtccca gcgacgcacc tgcgtcaacg cctggctgct gcctgaaccc tgcgccagtt
    25261 gttttagcgc ctcttcaagc tgctgcataa tcgcctgcgc gatccccgca tccgccgctt
    25321 cgctacgaat tgccacgcaa atatcgttcg gcgtggcgtt attaaaatcg tcatgccaga
    25381 aacctgtggt atctaataac gctttattgg cgggcgtacc catcattacg gaaacatcat
    25441 caacattttc tgattcgctg agttttcgtg aaataatcat taaactgacc gaatcctgaa
    25501 aacacccttt tttaataaag gcgtggatca taacaacccc ttaaaaattg cacccatggc
    25561 aattgcacga gcagtattaa tgtggcgatt acggtatcga tgacaacgag taaataaggt
    25621 gatgaatatc acacagggat tattaacaaa agaattcaaa taaccgccag gctattacgt
    25681 gttatttttt aataagcgtg gttattttaa aaaccaggtt aaaatcgagc ggattatcaa
    25741 ataaattcta actatatttt tttgcctgtc tggatcacat aatccagata ttttccctgt
    25801 atgttaattg cagtcatgct tcacaccgtc gttaaaaagg aagacagatg aaaatcagtc
    25861 gggaaacact ccaccagcta atcgagaata aactctgcca ggctgggtta aaacgtgagc
    25921 acgctgcaac cgtggctgaa gtattggttt acgccgatgc cagagggatc cactctcatg
    25981 gcgcggtgcg cgtggaatac tacgcggaac gcatttcaaa aggcggcacc aaccgcgaac
    26041 cggagtttcg tcttgaggaa accgggccgt gctcggcaat tttacatgcc gacaatgccg
    26101 ccggacaggt cgcggcgaaa atgggtatgg aacatgccat caaaaccgcc cagcaaaatg
    26161 gcgttgcggt agtcggtatc agccggatgg gtcacagcgg cgcaatctct tattttgtgc
    26221 agcaggcagc ccgcgccgga ttaattggca tttcgatgtg ccagtccgat ccaatggtgg
    26281 tgccgtttgg cggcgcggaa atttactacg
//
LOCUS       DAJVTL010000057        26100 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.057, whole genome shotgun sequence.
ACCESSION   DAJVTL010000057 DAJVTL010000000
VERSION     DAJVTL010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26100
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.057"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..452)
                     /gene="celF"
                     /locus_tag="OQQ26_002219"
                     /gene_synonym="chbF"
     CDS             complement(<1..452)
                     /gene="celF"
                     /locus_tag="OQQ26_002219"
                     /gene_synonym="chbF"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HCS1857662.1"
                     /translation="MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGG
                     KAKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERI
                     PLSHGYLGQETNGAGGLFKGLRTIPVIFDIIKDVEELCPNAWVINFTNP"
     gene            complement(557..1399)
                     /gene="chbR"
                     /locus_tag="OQQ26_002220"
     CDS             complement(557..1399)
                     /gene="chbR"
                     /locus_tag="OQQ26_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ChbR"
                     /protein_id="HCS1857663.1"
                     /translation="MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDY
                     YEFTLVLTERYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFE
                     QHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRH
                     YREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVTLSAKSQEYLTRATQRYYGKTP
                     MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLT
                     EFNQ"
     gene            complement(1407..1757)
                     /gene="chbA"
                     /locus_tag="OQQ26_002221"
     CDS             complement(1407..1757)
                     /gene="chbA"
                     /locus_tag="OQQ26_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIA"
                     /protein_id="HCS1857664.1"
                     /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ
                     GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARE
                     LITELIELHEKLKA"
     gene            complement(1808..3166)
                     /gene="chbC"
                     /locus_tag="OQQ26_002222"
     CDS             complement(1808..3166)
                     /gene="chbC"
                     /locus_tag="OQQ26_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIC"
                     /protein_id="HCS1857665.1"
                     /translation="MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAM
                     FVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFI
                     GMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVA
                     EMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQII
                     MDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQ
                     YGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLAL
                     PSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTM
                     PTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANAL
                     KF"
     gene            complement(3251..3571)
                     /gene="chbB"
                     /locus_tag="OQQ26_002223"
     CDS             complement(3251..3571)
                     /gene="chbB"
                     /locus_tag="OQQ26_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HCS1857666.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
                     AAAN"
     gene            complement(3870..4208)
                     /gene="osmE"
                     /locus_tag="OQQ26_002224"
     CDS             complement(3870..4208)
                     /gene="osmE"
                     /locus_tag="OQQ26_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HCS1857667.1"
                     /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAAK"
     gene            4410..5237
                     /gene="nadE"
                     /locus_tag="OQQ26_002225"
     CDS             4410..5237
                     /gene="nadE"
                     /locus_tag="OQQ26_002225"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HCS1857668.1"
                     /translation="MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV
                     LGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDR
                     PSLPDEVALGVTYDNIDDYLEGKNVPEQVARTIENWYLKTEHKRRPPITVFDDFWKK"
     gene            5467..6354
                     /gene="cho"
                     /locus_tag="OQQ26_002226"
     CDS             5467..6354
                     /gene="cho"
                     /locus_tag="OQQ26_002226"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HCS1857669.1"
                     /translation="MVRRLTSPRLEFEAAAIYEYSEHLRSFLNDLPTRPGVYLFHGES
                     DTMPLYIGKSINIRSRVLSHLRTPDEADMLRQSRRISWICTAGEIGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIA
                     DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
                     PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPL
                     LSGNYEITELDPANDQRAS"
     gene            complement(6314..6889)
                     /gene="ves"
                     /locus_tag="OQQ26_002227"
     CDS             complement(6314..6889)
                     /gene="ves"
                     /locus_tag="OQQ26_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310475.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="environmental stress-induced protein Ves"
                     /protein_id="HCS1857670.1"
                     /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
                     ANGEFSLFPGMERIVTLLEGGEMFLESADRFNHTLKPLQPFAFAADQVVKAKLTAGQM
                     SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGSWQLGDKLLTTDQGACWFD
                     GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
     gene            complement(7092..7577)
                     /gene="spy"
                     /locus_tag="OQQ26_002228"
     CDS             complement(7092..7577)
                     /gene="spy"
                     /locus_tag="OQQ26_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HCS1857671.1"
                     /translation="MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKF
                     GPHQDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAE
                     AQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATA
                     E"
     gene            complement(7907..8875)
                     /gene="astE"
                     /locus_tag="OQQ26_002229"
     CDS             complement(7907..8875)
                     /gene="astE"
                     /locus_tag="OQQ26_002229"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HCS1857672.1"
                     /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG
                     ALVISAGIHGNETAPVEMLDALLGAISHGEILLRWRLLVILGNPPALKQGKRYCHSDM
                     NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESLRWHLDLHTAIRGSLHPQFGV
                     LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG
                     QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM
                     PFKKGTLLAQDGDERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS"
     gene            complement(8868..10109)
                     /gene="astB"
                     /locus_tag="OQQ26_002230"
     CDS             complement(8868..10109)
                     /gene="astB"
                     /locus_tag="OQQ26_002230"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004972040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HCS1857673.1"
                     /translation="MSNPRLAAKQGLLKMKTLADAGFPQAVIPPHERPFIPVLRQLGF
                     SGSDEQVLEKVARQAPHWLSSVSSASPMWVANAATIAPSADTLDGKVHLTVANLNNKF
                     HRSLEAPVTESLLKAIFNDEEKFSVHSALPQVALLGDEGAANHNRLGGHYGEPGMQLF
                     VYGREEGNDTRPSRYPARQTREASEAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVI
                     AVSNRQVLFCHQQAFARQSQLLANLRARVNGFMAIEVPATQVSVSDAVSTYLFNSQLL
                     SRDDGSMMLVLPQECREHAGVWGYLNELLAADNPISELKVFDLRESMANGGGPACLRL
                     RVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYYRDRLTAADLADPQLLREGREALDV
                     LSQLLNLGSVYPFQREGGGNG"
     gene            complement(10102..10200)
                     /locus_tag="OQQ26_002231"
     CDS             complement(10102..10200)
                     /locus_tag="OQQ26_002231"
                     /inference="COORDINATES: protein motif:HMM:NF016857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HCS1857674.1"
                     /translation="MNAWEVNFDGLVGLTHNYAGLSFGNEASTRGV"
     gene            complement(10197..11675)
                     /gene="astD"
                     /locus_tag="OQQ26_002232"
                     /pseudo
     CDS             complement(10197..11675)
                     /gene="astD"
                     /locus_tag="OQQ26_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416260.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
     gene            complement(11672..12706)
                     /gene="astA"
                     /locus_tag="OQQ26_002233"
     CDS             complement(11672..12706)
                     /gene="astA"
                     /locus_tag="OQQ26_002233"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HCS1857675.1"
                     /translation="MMVIRPVERTDVSALMQLASKTGGGLTSLPANEATLSARIERAI
                     KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELN
                     VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV
                     AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
                     QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE
                     VAEGQPAQGDFPACLVANENYHHFRVVLVRTDPATERLILTAAQLDALKCHAGDRVRL
                     VRLCAEEKTA"
     gene            complement(12703..13923)
                     /gene="astC"
                     /locus_tag="OQQ26_002234"
     CDS             complement(12703..13923)
                     /gene="astC"
                     /locus_tag="OQQ26_002234"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylornithine/acetylornithine transaminase"
                     /protein_id="HCS1857676.1"
                     /translation="MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDF
                     AGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLQLAKKLIDATFADRVFFC
                     NSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAP
                     LPPDIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNA
                     LLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECASVMTVG
                     THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRG
                     LGLLIGCVLNADYAGQAKQISLEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDR
                     FAAACERFVSGGSS"
     gene            14369..15175
                     /gene="xthA"
                     /locus_tag="OQQ26_002235"
     CDS             14369..15175
                     /gene="xthA"
                     /locus_tag="OQQ26_002235"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HCS1857677.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGN
                     VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLEAELKRENPVLIMGDMNISPGDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSK
                     GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
     gene            15342..16052
                     /locus_tag="OQQ26_002236"
                     /pseudo
     CDS             15342..16052
                     /locus_tag="OQQ26_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416264.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
     gene            16057..16734
                     /gene="ydjY"
                     /locus_tag="OQQ26_002237"
     CDS             16057..16734
                     /gene="ydjY"
                     /locus_tag="OQQ26_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YdjY"
                     /protein_id="HCS1857678.1"
                     /translation="MSQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSN
                     SQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGHATPKAFYEAL
                     KEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKTYSFDEVIVDSNGKKLDMRFG
                     GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLAT
                     VTFKITE"
     gene            16749..17455
                     /locus_tag="OQQ26_002238"
                     /pseudo
     CDS             16749..17455
                     /locus_tag="OQQ26_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697152.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
     gene            17455..18003
                     /locus_tag="OQQ26_002239"
     CDS             17455..18003
                     /locus_tag="OQQ26_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HCS1857679.1"
                     /translation="MGLPPLNKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV
                     SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSSDKLLAVAD
                     WRQSPLFSDEERLAQEYAEAASVTPPTVDDALRTRLATHFDAQALTELTALIGLQNLS
                     ARFNSAMDIPAQGLCRIPEKRS"
     gene            18013..19179
                     /locus_tag="OQQ26_002240"
     CDS             18013..19179
                     /locus_tag="OQQ26_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1857680.1"
                     /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDT
                     AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE
                     NFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
                     VTPQPPQTPQALLEFAKVNPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA
                     TFARVTAPLWQYLDALHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI
                     ASGDLPATSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPAV
                     WGDPSVLDPQKLPDEQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH"
     gene            19152..20687
                     /locus_tag="OQQ26_002241"
     CDS             19152..20687
                     /locus_tag="OQQ26_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1857681.1"
                     /translation="MVTPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQAL
                     FADPQLPQALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVA
                     FATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKRL
                     LQQVIVLDSLGYSRWQCLNWLLLPSIVPALAMAMLAIVAWSLSVVDVAIILGPGNPPT
                     LAVISWQWLTQGDADQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGIRKP
                     ATPLLPGTTLAIFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLL
                     LWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLNLDGSWTAVVWGHLLWVMPWML
                     FILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPTLIAFAVGFSVSIAQYMP
                     TLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLSPLIIFALTALVAKWVGYVRQ
                     GLR"
     gene            20687..21340
                     /locus_tag="OQQ26_002242"
     CDS             20687..21340
                     /locus_tag="OQQ26_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707358.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCS1857682.1"
                     /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
                     SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
                     ATLKGNARRNAVNDALERSGLDGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEP
                     FSRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR"
     gene            21407..22714
                     /gene="ynjE"
                     /locus_tag="OQQ26_002243"
     CDS             21407..22714
                     /gene="ynjE"
                     /locus_tag="OQQ26_002243"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310490.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YnjE"
                     /protein_id="HCS1857683.1"
                     /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID
                     TRPSAFYNGWPQTLNGPSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALY
                     GNGKDVDAVKTRLQKAGFTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV
                     TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH
                     GIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLMDGGWQTWSDAGLPVERGTPPKV
                     KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE
                     IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPDQQVSFYCSTGWRAS
                     ETFMYARAMGWNNVSVYDGGWYEWSSDPKNPVATGERGPDSSK"
     gene            complement(22723..23352)
                     /locus_tag="OQQ26_002244"
     CDS             complement(22723..23352)
                     /locus_tag="OQQ26_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707357.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HCS1857684.1"
                     /translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP
                     FLALGWYLAALVVILLNRLLDGLDGALARRRGLTDAGGFLDISLDFLFYALVPFGFIL
                     AAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
                     ILLFVLGCLFPAWFAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ"
     gene            23439..23846
                     /gene="nudG"
                     /locus_tag="OQQ26_002245"
     CDS             23439..23846
                     /gene="nudG"
                     /locus_tag="OQQ26_002245"
                     /EC_number="3.6.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP pyrophosphohydrolase"
                     /protein_id="HCS1857685.1"
                     /translation="MKMIEVVAAIIERDGKILLAQRPAQSEQAGLWEFAGGKVELDES
                     QQQALVRELNEELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV
                     WCSPEEALQYPLAPADIPLLEAFMALRAARAAD"
     gene            complement(23812..24084)
                     /locus_tag="OQQ26_002246"
     CDS             complement(23812..24084)
                     /locus_tag="OQQ26_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HCS1857686.1"
                     /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
                     CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLLWRRVKP"
     gene            24320..25663
                     /gene="gdhA"
                     /locus_tag="OQQ26_002247"
     CDS             24320..25663
                     /gene="gdhA"
                     /locus_tag="OQQ26_002247"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HCS1857687.1"
                     /translation="MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPK
                     YRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVN
                     LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEVEVMRFCQALMTELYRHLGA
                     DTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYF
                     TEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDKSGFTK
                     EKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQ
                     LIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLG
                     WKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
     gene            complement(25780..>26100)
                     /locus_tag="OQQ26_002248"
     CDS             complement(25780..>26100)
                     /locus_tag="OQQ26_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HCS1857688.1"
                     /translation="AAELSWMISISSTAFQNGTIEEELAWHYIMLASRKAYELFESEE
                     DYQKNSLMGFLYWHICCYRRKLTDAELEACYRYDKQFWEHYSKKCRWPIRNVPWGATS
                     VKYS"
BASE COUNT         6366 a         6877 c         6512 g         6345 t
ORIGIN      
        1 gggttagtga agttaatcac ccatgcattc ggacaaagtt cttcgacatc ttttatgatg
       61 tcaaaaatca ccggaatggt acgcagacct ttaaacaaac cgcccgcgcc gttggtttcc
      121 tgaccaagat aaccatgact taatggaata cgttcatcca gttcacgcgc cggtaattgg
      181 ccaacgcgca gttgggtagt aacgaaatca gcatctttca atgcttcgcg gcgatccagc
      241 gttttataaa gcttcatcgg gacgccagcg ttatcaatca tccgttggca gagatcgaaa
      301 ataatatcca gtttagcttt gccaccttcg acatccacca gccataattc gctgaccggc
      361 aattcgtggt atcgcttaat aaatccttcc agtaactccg gggtatagct gctcccgcca
      421 ccaatagtga cgacttttaa tttctggctc ataatttctc ccttcagtac agaatactga
      481 tatctggcat atctgccccc ccggacataa ataatccagc aacaggacag atatgttaat
      541 tgtcaggtat aacgacttac tgattaaatt cagtcaattt cttacgatag ctcttaggcg
      601 taaaggacgt taatttctta aacgttttaa taaacaaact cgggctacta taaccggcct
      661 caaacgcaat atccgtcact gaatagttag tcatttccag ttgttttttg gcaaaattaa
      721 tacggatttc attaataatc tgcattggcg ttttgccata atatcgttga gtcgctcgcg
      781 tcaaatattc ctgtgatttg gctgacaacg tcaccatatt ctccagcgcc gattcactga
      841 actgctcttt atcatgcatc ttttctaccg tacttttcag ccactgcggt acatcatcaa
      901 tcacctgttc ttcgcggtaa tgacgtaaac ggttaatgac ataaaaagta accatctcaa
      961 caaactcttc cagccctgtt tcgcggaaat tcaatgaaga aatcactgtt tccacatagg
     1021 tgagaaaagc gttattggtc cggtatacct gcgaagctac aaagcaataa ggcaacaacg
     1081 gcaggtaatg ctgctcaaaa aagcgtttac tgatcccaac gttcaatatg cgcgtggcac
     1141 caaactcata aaaactttga tggtgcgaac ctaacggaat aaaaacaaaa tcgccccgtt
     1201 ccagtaacac gcgcttaccg ttaatctcct ggaaataacg ctcggttaat accagagtaa
     1261 attcataata gtcgtgctga tgcagtccgc tgatactctc agttttgtta tagataaaca
     1321 catggaagtt tttgccatta aacaactgct gttctcgggc agtggcaatt tccggcgcgt
     1381 taatcactgg ctgcatcatc gactccttat gccttcagtt tttcatgaag ctcaattaat
     1441 tcagtaatca gttcacgcgc aagcatggac gtcattaaat gatcctgagc gtggaccagc
     1501 accagactca ctttcatctt accttcgccc gcatcgcctt caatcagttt cgtctgtacc
     1561 agatgcgctt cattcaatgc catccgtgac tgatccatca tggcttttgc tgcggcaaaa
     1621 tcgccctgct tcgcctgttt cagtgccgca tacgccaggc tgcgcgcttg tccggagttg
     1681 atgataagcc ccatcaccac ttcttccagc tcttcagctt ccgtttgcgt atcgggaatg
     1741 ttatcgagat ccatcataca tcgttcctct cttttcttac cggcacgatt acccgtaccg
     1801 gcatcgatta aaatttcagg gcgttagcga tatcttcttc gctctcttct ttatcaatcg
     1861 cattttgtgc tttgttagcc accacaacaa agggcagata aattaacgtt gcgatgccaa
     1921 ggttgaagag tgcgaccagc aatgcggcga cgctaccgtt ggtattaaag aaggctccca
     1981 gaccggttgg catggtccac ggtgcaatat tggtcaccgg aggaataatg cccatgtagt
     2041 acgctgcgag ggtgattgcc gccagaatcg gttgtaccag tacaaacggg ataaacatca
     2101 ccgggttcat gataattggc agaccaaaca gaatcggttc gttaatctgg aagatgccgg
     2161 acggcagcgc cagttttgcc acctgacgat aatcagcacg gcgagaggcg ataaagatag
     2221 ccaggatcag gcctaaagtc gcaccactgc ccccaaggaa aataaaggag tccagcatcg
     2281 gcttggccca gatatggaag gtcttaccgg ctgccagcgc cgcttcgacg gaaccatatt
     2341 gctgataggt cgcgatattt tccagcgccc acggcgtcat aatgccgttg tccagtgcgg
     2401 tcagcgccag cgcgccatga ataccgaaga accagagcag tggaacaaag atcacatagg
     2461 cccagcccac cacgctaccc aacgatgcca gtggggttga gatggtatcc ataatgatct
     2521 gatggaagtt ggtgccccag gtattcaacg cccaggcaat aatccccatc acggaaagaa
     2581 taataaagcc gggaattaat gccgagaagg aacgcgatac tgaagcaggt acgctgtcgg
     2641 gcagtttaat gacccaattg cggcggacaa taaaggtaaa catttctgcc accaccaggc
     2701 caataataat cccggagatg atattcgccc cacctaacca gtttgcgcca accgcatagg
     2761 cctcaccgac actatatggg gtgacggtca taaatgctgc aacggataac aacccagccg
     2821 ccagcgcatc gactttacgc tcttctgcca gcgccatgcc aataaagaac ggtgccatta
     2881 aagacattat ccctaatgtt ccgttatata cgttgccgcc aatacctttc agaccattaa
     2941 gtgtttcaat ggttgaggcg tcgaggcgaa tacctaagga ataaaaaaac gacccttccc
     3001 caaagcttag aaaaacgttg ttaattaata caaacatggc ccccgcaagg gttaacggca
     3061 ttaagcgaat aaagccattt ttgattgcat taacgtgtgg ctgctttcct attttaactg
     3121 caaaagggag gagtaccttt tcaagcgatg caataacatt actcatagaa aaataccctt
     3181 aaaaaccgca agttaaatat tgcggtattg atttatgaaa taactctttg acgggaaaat
     3241 ttaaaataaa ttaatttgct gcggcttttt taatcgctgc aaccgcagcc ttaagcacgc
     3301 ctaaaccatc gactttgcca taaagcagcg agtcaattac ttcaaccggt ttgttgggta
     3361 acaaacgctg gatttcgggc aacatataag caatctgcgg ccctaataac acgacatcgg
     3421 cattctgacc tttttcacca gccagtgttt ccggaaatgc ttcaataatg accggaactt
     3481 catatttttc tgcctgtgcg cgcatttttg ataccagtaa agaggtagac atgcccgcag
     3541 aacaaaacag ataaatgtgt ttcttttcca taaaactgcc ctcatcgacg attatctgtc
     3601 agccagacac tccgcaagcc ttaacctgct tccatgctct gggtaacttg cgaaaccaac
     3661 atgacttttt ttgtggctga aaggagtata cggtatagac ctgagcaata gtatttcttt
     3721 gaccttataa attgtctctc cttgacctgt ggttatgacc cccttcacat ttcgggcaaa
     3781 taattcgcga agataattaa gaactcaggc caaaaaaaac cggcgcaatg gccggtttcc
     3841 gttgttactc aagctttcag acgaagtgat tacttcgcag cctgtggatc agtgtcgtat
     3901 tcagcacagg tctgataacc ggagttgatg acatgtccgg tatcatctaa cgcgacaaag
     3961 taggtttctg ctttaccatc acgttgaccc aggatgtagg tctggcaagt accacgagca
     4021 tggatcatgc tcacttcaga cgaaggttta cccgcaattt gtgcaacctg cgcccggctc
     4081 atgccttttt tgacgtcttt caccacaggc tgtacaaact ggtctttagt acgatcataa
     4141 gccgtacaac ccgccagcat ggttaatacc gccgctgcac tcagaattcc tgccatattc
     4201 ttgttcatat tccgtcctct tgtttatcag cgtgttagat aagcctggaa tacattgggc
     4261 gctttttcaa gcccgtgaac gaaacggctc cgctttcaga ggattcctgt atgacgtttt
     4321 aaccaccatt cagcccgctg tcgcttgtcg tttcagtagc aacgggttag ctttaaggaa
     4381 gttttgtctt ttctgtctgg aggggttcaa tgacattgca acaacaaata ataaaggcgc
     4441 tgggcgcaaa accgcagatt aatgctgaag aggaaattcg tcgtagtgtc gattttctga
     4501 aaagctacct gcaaacttat ccgttcatta aatcactggt gctcgggatc agcggcggtc
     4561 aggactccac gcttgccgga aagctgtgcc agatggcgat taatgagctg cgccaggaaa
     4621 ccggcaacga atcactgcaa tttattgccg tacgcctgcc ctatggtgtt caggccgacg
     4681 aacaagattg ccaggatgcc attgccttta ttcaaccgga tcgcgtatta accgttaata
     4741 tcaaaggcgc ggtattggct agcgagcagg cattgcggga agcaggcatt gaactgagcg
     4801 attttgtccg tggcaatgaa aaagcgcgtg agcggatgaa agcacaatat agcattgcgg
     4861 gtatgaccag cggtgtcgtg gtgggcaccg atcatgcagc agaagccatt accggattct
     4921 tcactaaata tggtgacggc ggtacggaca ttaatccgct gtatcgtctc aacaaacgtc
     4981 agggtaaaca gttactggcg gcattaggtt gcccggaaca cctttataag aaagcgccaa
     5041 cggccgatct ggaagatgat cgcccttctc tgccagatga agtggcactc ggcgtgacct
     5101 atgacaatat cgacgactat ctggaaggga aaaacgtacc tgaacaggtc gccagaacaa
     5161 tagagaactg gtatctgaaa accgaacata aacgccgtcc gccaattacc gttttcgatg
     5221 atttctggaa aaagtaataa tttgcacata atggtttgtg cgaaaaagag taatttgttc
     5281 acgccggatg cggcgtgaac gccttattcg ccccacaaaa ctatgcaaat tcaatacatt
     5341 gcaggagtcg aataggcctg acaggcgtag cacgtcagac ggtgtaacct ttgtcatcga
     5401 cccgcctctt ttttaatcgc ttcccgcctg ttatactgga tagataacca gcattcggag
     5461 tcaacagtgg tacggcgttt aacttctccg cggctcgaat ttgaagctgc ggcaatttat
     5521 gaatattccg aacatttacg ttcattcctt aatgacttac ccacccgacc aggggtgtat
     5581 ctgtttcatg gcgaaagtga caccatgccg ctctatatcg gcaaaagcat taatatccgc
     5641 agtcgggtgc tttctcattt acgcaccccg gatgaagccg acatgctacg gcaatcccgg
     5701 cgaattagct ggatctgtac cgcaggcgaa atcggcgctc tgctccttga agcgcgatta
     5761 atcaaagaac aacagccgct gtttaataaa cggttgcgcc gcaatcgcca gctctgtgcc
     5821 ctgcaattaa atgaaaagcg cgtcgatgtg gtgtatgcca aagaggtgga tttttcacga
     5881 gcccccaacc tgtttggcct gtttgccaat aggcgcgcag ctttgcaagc attgcagacc
     5941 atcgctgatg aacaaaaact ttgttatggc ctgctgggac tggaaccgtt aagtcgcggt
     6001 cgtgcatgtt ttcgttcagc gctaaaacgt tgcgccggag catgctgcgg taaagagagc
     6061 catgaggaac atgcgctacg cttgcgccag tctcttgagc gtttgcgggt ggtgtgttgg
     6121 ccttggcaag gtgcggtggc actgaaagaa cagcacccgg aaatgactca atatcatatt
     6181 attcaaaact ggctgtggct gggggcggtt aattcactgg aagacgcgac aacgttaatt
     6241 cggacacccg ccgggtttga tcacgacggt tataaaattc tttgtaagcc gctgctttcc
     6301 ggtaactatg aaattactga acttgatccg gcgaatgacc agcgagccag ttgatttcac
     6361 tgaacaacag tttaccttgc ggttgtaaaa gccgcagggt gtgcctgcca tcgaaccagc
     6421 acgcgccctg gtcggtagtg agcagtttat cgcccagttg ccacgacccg ttaattacaa
     6481 acaccacccc gccgcgtgag ccaaaggtag taaacgtacg ttcggctatt ctgactttcg
     6541 ccttacagac atccaggcgt gtcatgatgt tgaaatccat cgacatctgc cctgccgtca
     6601 gtttcgcttt taccacctgg tccgccgcaa aggcaaaagg ttgtaacggt tttaaggtat
     6661 ggttaaagcg gtctgcgctt tcaaggaaca tctctccgcc ttccagcaac gtcactatcc
     6721 tttccatgcc tgggaacaaa gaaaactccc cattcgccgc gatggatgca atgctggcac
     6781 gccagtaaaa atcacgtttt gccggtggga aagtgcaaat ttctcgcgtt tcaccggcag
     6841 cgtttcgcca cagatttacc gacattttac gcatatcaaa gtattccata ctcgctcccg
     6901 gcccgttctt ttcattgtta tcgttcaggt aaccgtggat ggttatcggc aactcgggtg
     6961 atttacgtta gtggtgatca ggcttttttt acaactgttt gagaagagaa aagaaaaccg
     7021 ccgatcctgt ccaccgcatt actgcaaggt agtggacaag accggcggtc ttaagtttct
     7081 tggctgaaag attattcagc agttgcaggc attttacctt ttgccgctgg acgttctgtc
     7141 agacgcttct caaaattagc attaaattgc tttttctgtt ccggcgtcag gatgttgtaa
     7201 attttgttct gggtttccat gtgcgccagc atgttagctt tgcgctgttc ttccattttt
     7261 gcgatctgcg cttcagcttt tgctttatcg aaggtatcgc tggcaatgat gtcatgcatt
     7321 gcgcggcgtt cttccagcgg cggacgtttc atctggtcac gctggccttt catgatttcg
     7381 cggatctgct gtttctgcgc gtcggtcagg ttcaggtctt tgaacatcat gtcctgatgc
     7441 ggaccgaact tgcctttgtg gtgcatcatc ggcttcgcgt cagccggtgc tgcggtagtg
     7501 gtgtctgcgg catgggccag gttagccgcg ccaagagcca gggtagaggc aacaaacagt
     7561 gcagttaatt tacgcatatt ctatatcctt cctttcagtt atttattacg gctttcttaa
     7621 gtagcgtgcc gtgttgacga gattaacttt actgacttta gcgtcaatta atcagagcaa
     7681 cggtaaaaca atgaaactgt aaaaaacact tttgcgccaa ttatggagaa aaaaagaaaa
     7741 tttgatggag agtgatgaga gaatattaca acatgatgat tttgcagaga ttatgaagaa
     7801 ctataccgga tgactggtga taaataaagc aaataaccag gattaatctg tattaattta
     7861 taagaaagca acttaatacc cgcagaatga tttctgcggg taagtattag cttatttttt
     7921 cgagcattaa tcccgcgcgt aatcccaacg ctaccaacgg attagggaat aacacatact
     7981 ctacatcatg ggttacggta aaacgttcat caccgtcctg cgccagcaac gttcctttct
     8041 taaacggcat aaaattcagc gtgtcacttg ccatatgcat ttcgaaggac ggcgagtggc
     8101 gagtaatttg cgaaaccacc cgataacgga gcggcggcgt tctcacgata ccgacactct
     8161 caccagatag tagcgcagca attgcgctgg cagttactgc aaactggcga agatcgtttt
     8221 gcccaaaggg caacgctttg ccaagttcca gcgtacaggc cagcgcgcca aaatgtctgg
     8281 cgctgaaatg ggtaaacgta ccaccaggct cctgatggaa caccagcgcc tccagacccg
     8341 ccgcacccag ccacgtcaga aatttctcgt cccagggtat gtcgcgttgc ggtaatacac
     8401 cgaactgcgg atgcaaggag ccacgaattg cggtatgtag atcaaggtgc cagcgcaaag
     8461 attctttgcc ctggtcataa aaatcttcca ggcactgttc cagttcgcgt gcccgacagg
     8521 tttccccgct ttcagcaaac agctgccaac gaccgccaaa cattcggttc atatcgctat
     8581 ggcaataacg tttcccttgc ttcagcgcag gaggattccc gaggatcacc agcaaccgcc
     8641 aacgtaacag gatctcgccg tgagatatcg cgccaagcaa cgcgtccagc atctccacag
     8701 gtgccgtttc attaccgtgt attcccgctg aaatcaccag tgcgccttgc ggtggcgtta
     8761 atggcgtcag ttccagcaca ccatcgccca gccagcgcca gcgaacgccg ttgatttctc
     8821 gctcggtgat aaccggtttt ttacccgtta aggtcagagc aagaaaatta tccattgccc
     8881 cctccctcgc gctggaacgg ataaaccgaa ccgagattca gtaattggct caatacatcc
     8941 agtgcttccc gcccttcgcg cagcaattgc gggtcggcca gatcggcagc agtaaggcga
     9001 tcgcggtagt aacgatccac ccagtcattg agcgcattaa acagcgtatc gttcatcata
     9061 accgccggat tcaccgcccg gcgttcttct tctgtcaata ccacccgcaa ccgcaggcac
     9121 gccgggccgc cgccattcgc catgctttca cgtaaatcaa agacttttag ttcgctaatc
     9181 gggttgtcag cggcaaggag ttcattgaga taaccccata ctccggcgtg ttcccgacac
     9241 tcctgaggca gcaccaacat catggaacca tcatcgcggc tcaacagttg gctgttaaac
     9301 agatatgtag acaccgcatc cgacacggaa acctgagttg ccggaacttc tatcgccata
     9361 aaaccgttca cccgcgcacg caggtttgcc agtaactgtg actggcgagc gaacgcctgt
     9421 tggtggcaaa acagcacctg gcggttactc acggcaatca cgtcattatg aaaaacaccc
     9481 tggtcgataa cgtccgggtt ttgctgggcg aaaatcacct gttggggatt cacctgatta
     9541 agccttgcca ccgcctcgct ggcttcgcga gtctgtcgcg ccggataacg ggaaggccgg
     9601 gtatcattgc cttcttctcg cccgtagaca aaaagttgca tacccggctc accgtaatga
     9661 ccgccgagac gattgtggtt tgccgccccc tcatcaccga gcaacgctac ctgcggcaac
     9721 gccgaatgga cgctaaattt ctcttcgtcg ttaaaaatag cttttaacag cgattcagtg
     9781 acgggcgctt ccagcgaacg gtgaaattta ttgttcaggt tggcaacggt gagatgcact
     9841 ttgccatcca gcgtatcggc agatggcgcg atcgttgccg cattggctac ccacattggc
     9901 gaagcggagc tgacgctgga aagccagtgc ggtgcctggc gtgcaacttt ttccagtacc
     9961 tgctcatcgc taccactgaa tcccaactga cgcagcaccg gaataaacgg acgctcgtgc
    10021 ggcgggatca cggcctgggg gaatcccgca tcggcaaggg ttttcatttt cagtaagccc
    10081 tgtttcgccg ccagtcgcgg gttagacacc tcgggtagag gcttcattac caaacgacag
    10141 gccagcgtaa ttgtgtgtca gccctaccag cccgtcgaaa ttaacttccc aggcgttcat
    10201 cgcaccacct catcggaaaa atccagcccg gggttaagcg ttgcgggcaa agttaacgag
    10261 tccgactcca ggctcgccat aggccatgcg cagtaatctg cggcatacca ggcgctgggg
    10321 cgatggttac cggatgcacc aatgccgctg aatggcgcgg tactggcagc accagtaagc
    10381 ggtttgttcc agttaacaat ccccgcccgc gcctccagca acagttgatc gaatttttcc
    10441 cgctcggggg aaaccagacc gcaagagagt ccgaagcgag tgttattcgc cattagaatc
    10501 gcttcctcga aagaatcata acgccagacg cgcaataacg gtccgaacac ctcttcatct
    10561 ggtacgccag caacgcctgt catttcaatg atccccggcg tcagcaacga tgtctctgat
    10621 tgtaataagc gcggcgcaag cagggttcgt ccgcccatcg cttccagttg ctaccaggca
    10681 gtaaccacct gctgtgcggc ctgttcagaa atcagcccgc caataaacgg ctgcggttcg
    10741 tcatcccagt tgcccggcgt taatcgctgg ctgacggcaa ccagacgagc aagaaacgca
    10801 tcgccctgcg ccccgctttt cagcaataaa cggcgggcgc aggtgcagcg ttgaccggct
    10861 gtgacaaacg ccgactgaat ggtcagatgg acagcggcat cgatatccgc cacctcatcg
    10921 ataattagcg gattattacc gcccatctca agggcgagaa ttttctccgg ctgaccggag
    10981 agctggcgat gcagctggta gccggtattg gcgctaccgg taaacagcaa accgtcgaga
    11041 tcctccagcg cactcagcgc ctgacccgtt tcacgcccgc cctgcaccag gttcagcacg
    11101 cccggcggca agccagcctg ctgccataaa cgcattaccg cttcgccact ccacggtgtc
    11161 agttcgctgg gtttaaagat aatggtgtta cctgccagca atgccggaac gatatgtccg
    11221 ttcggcaaat gaccagggaa attatacggc ccaaacaccg ccagcacgcc gtgcgggcga
    11281 tgtcgcaggc tcgccgcacc gtccggcatt tcactacgct gctcgccggt acgaacgtga
    11341 tacgccttaa ttgatatcgc gattttattg atcatcgccg tcacttcggt tgccgcttcc
    11401 cagcgcggct tacccgtttc tctggcaata atcgtggtta attcggcttt attgctttcc
    11461 agcagtgcgg caaagcgttc gacaacggcc tgacgttcag caaatgagag ccgcgcccag
    11521 cgcggaaacg ccgcacgggc tgcccgacaa gcctggccga cctgagcggc atcggcctca
    11581 ttgccttgcc ataacacctc tcccgatacc ggattacgct tcacacgcga tgcgccctag
    11641 cccgttatcc agtcaccgtt aatccataaa gtcatgctgt tttctcctct gcgcacaggc
    11701 gcaccagacg aacgcgatcc cctgcgtggc atttgagggc atccagttgt gcggcggtta
    11761 aaatcaaacg ctcggttgcc ggatcggtac gcaccagcac cacgcggaaa tggtgataat
    11821 tttcattggc gaccaggcag gccggaaaat cgccctgcgc aggctgccct tctgccactt
    11881 ccaccagccg acttttacgg atggcgcgca cgcggtcgat gtcacactca agcgttggcc
    11941 cgccgtcgaa gatgtcgata tagttgcggt aacgaaaacc ttctttctcc agcaccgcgc
    12001 gggcaggcgc ggtttgcgga tgtacctgac cgatgacgtc ctgggcttcc tgagataaaa
    12061 agtgcgtata gatcggatgt ttcggcatca gttccgcaat aaatgccttt tgcccggtgc
    12121 cgcagagaaa atcggcgcgg ctaaaatcca tcgaaaagaa gcgtttacca aggctttgcc
    12181 agaacggtga atagccgtgt tcgtcaatca ccccgcgcat ttcagcgacc actttgtcgt
    12241 taaacttatc gcgaaaggcc gccataaaca taaagcgcga tttcgacagc aaatagccgt
    12301 tgccctcttt gcgccagtcc gggtcgagaa acagcgtgca cagctcgctg ctgccggtgt
    12361 gatcgttact gagaaacagc gtcggcaatg cgttatagac attcagctct tttgaggcgt
    12421 gaaccaatgt gccgacgcga tagttgtacc atggatcgtt cagcccaact gccacctcaa
    12481 tggcacaaat ccccgccacg gtgcctgtct cgctatcttc cagcacgaac acatagccct
    12541 gctcactttt gggcagttcg ccttgccagg ttttgattgc cctttcgata cgcgccgaaa
    12601 gcgtggcttc attggcggga agcgacgtca ggccgccgcc cgttttgctg gcaagctgca
    12661 tcagcgccga gacatcagtg cgttcaacgg gacggatgac catcatgatg aacctccgct
    12721 cacaaagcgt tcacaggccg cagcaaagcg atccagtccg gtcgtcacct cttcttcgct
    12781 gacattgagc gcaggcgcaa aacgcaccac gttgccaccc gcaatcagta ccatcacgcc
    12841 tgctttcgcc gcttccagag agatctgttt cgcttgcccg gcgtaatcgg cattcagtac
    12901 acagccaatc aaaagaccta agccgcgaac ttcactgaac aaaccgtagc ggtgattaat
    12961 ggtattaaga cgctcaacaa accagtcgtg acgctgttta acgccattaa gcatctctgg
    13021 tgtgttgatg agctccagca ctttgcctgc caccgccgag gccagcggat tgccgccata
    13081 ggtggtgcca tgagtgccaa cggtcatcac gctggcgcac tcttcggttg ccaacaacgc
    13141 accgaccggg aaaccgccgc ccagcgcttt ggcggtagtt aacagatcgg gcgtcacgcc
    13201 gtagtgcata taggcataca gttccccggt gcgcccgacg ccggtttgta cttcatcaaa
    13261 aatcaacagc gcattgtggc ggtcacacaa ttcacgcaga ccttgtaaaa atgcgttgct
    13321 ggctggcacc acaccgcctt ccccctggat gggttcgaca atcaccgcac aggtagaatc
    13381 gtcaatcagc gcgctggcag agttaatatc attatatgca gcatgacgaa tatccggcgg
    13441 cagtggcgca aaatcctgtg aataggctgg ctgcccaccc gcactgacag taaacagcgt
    13501 gcgaccatga aacgcatttt taaacgccac gatgccgctc ttatggctgc cgtagcggtc
    13561 gtgagcgaat ttacgcgcca gttttagcgc cgcttcgttg gcttccgcac cggagttaca
    13621 aaagaaaacg cgatcggcaa acgtggcgtc gatcaatttt ttcgccagtt gcagtaccgg
    13681 ctcgttggtg taaccgttgc cggtatgcca gaacttactc gcctgttcgt tcagcgcctc
    13741 acgcagttcc ggatgcgcat ggcccagcgc gttcaccgca atgccacccg cgaagtcgat
    13801 atactctttc ccctgctgat cccacaagcg cgaaccttcg ccacgtaccg gtataaaggg
    13861 tgccggagcg taaacaggta tcatccattc atcaaagttt tcacgcgtaa ttggctgaga
    13921 catagcgacc cctacagtaa ataattcgtt atttacatgt taacaataag taatatttgc
    13981 gctgtaaatg tagattgcag ggttcatgcc agccagtgat aaaagtgcat aaacggtgga
    14041 ggctaactgg aaatcaagga gttataacca aaccatatgc atttaaagtg catataaagt
    14101 gaatacgttt gcgatgtggg tgaataaaaa gaataaaaaa cgcaatgtta tgcagaagta
    14161 aaatataatt ctggaattgt gatcattgac gaaatttact ggaaattact gcgccattct
    14221 gacgcagcac gcaccaaaag cgggcatttt ttgcgccatc gttgacatca ttaacaacca
    14281 tcgatcaaat cacttaacaa caggcggtaa gcaaagcgaa attctgctac catccacgca
    14341 ctctttatct gaataaatgg cagcgactat gaaatttgtc tcttttaata tcaacggcct
    14401 gcgcgccaga cctcaccagc ttgaagccat cgtcgaaaag caccaaccgg atgtgattgg
    14461 cctgcaggag acaaaagttc atgacgatat gtttccgctc gaagaggtgg cgaagctcgg
    14521 ctacaacgtg ttttatcacg ggcagaaagg ccattatggc gtggcgctgc tgaccaaaga
    14581 gacgccgatt gccgtgcgtc gcggctttcc cggtgacgac gaagaggcgc aacggcggat
    14641 tattatggcg gaaatcccct cgccgctggg caatgtcact gtgatcaacg gttacttccc
    14701 gcagggtgaa agccgcgatc atccgataaa attcccggcg aaggcgcagt tttatcagaa
    14761 tctgcaaaat tatttggaag ccgaactcaa gcgtgaaaat ccggtgctga ttatgggcga
    14821 tatgaatatc agtcctggcg acctggatat tggcattggc gaagagaacc gtaagcgctg
    14881 gctgcgtacc ggaaaatgtt ctttccttcc ggaggaacgc gaatggatgg agagactgat
    14941 gagctggggg ttggtcgata ccttccgcca tgcgaatccg caaacggcag atcgtttctc
    15001 atggtttgat taccgctcaa aaggttttga cgataaccgt ggtctgcgca tcgacctgct
    15061 tctcgccagc caaccactgg cagaatgttg cgtagaaacc ggcatcgact atgaaattcg
    15121 cagcatggaa aaaccgtccg atcacgcccc cgtctgggcg accttccgcc gctaatttag
    15181 cagctctcct ggctcaaact gggtcaggag aattaacctt gagaaaaatc aacaaactgt
    15241 cagtaatgat ttgttgcctg ccgtcctttg ttataccgtc tctgcgtttt tagttgtctg
    15301 accacttctc tattatcaag tttgatatag gaaattccac gatgaacgct gagcgtaaat
    15361 ttctttttgc ctgtcttatt tttgcgctgg tcatttacgc tatccacgct ttcggtttat
    15421 tcgatctgct caccgattta ccccacttac agacactcat ccgccagagc ggatttttcg
    15481 gctatagcct ctatattctg ttattcatca ttgccaccct ctttctgtta ccaggaagca
    15541 tactggtgat cgctggagga atagtttttg gcccgctctt agggacacta ctctcattaa
    15601 ttgccgccac gctggcctcc tcgtgctcat tcctgctgac gcgctagctg ggacgtgatt
    15661 tactgctgaa atacgttggc catagccata ccttccaggc cattgaaaaa ggcattgcgc
    15721 gtaacggtat tgattttctt attctaaccc gcttaatccc gttgtttcct tacaatattc
    15781 aaaattacgc ttacggatta accacaatcg ccttctggcc ttataccctt atttcggcac
    15841 tcacgaccct gcccggtatt gttatttata ccgtgatggc aagcgatctc gccaatgaag
    15901 gcattacgct gcgctttatt ttacaactct gtctggcggg cctggcgctg tttattctcg
    15961 tccagctcgc aaaactctac gcccgacaca aacatgtgga tctgtctgct tcgcgccgca
    16021 gcccacttac tcacccaaaa aatgaaggat agaacgatgt cgcaacatta ttcagtgtca
    16081 tggaaaaaag gactggctgc actctgctta ctggctgttg ccgggcttag cggctgcgat
    16141 caacaagaga atgcggcggc aaaagtggaa tacgacggac tttcgaacag ccaaccgctg
    16201 cgcgtcgatg ccaataacca tacggtaacc atgctggtgc aaattaatgg tcgtttcctc
    16261 accgacgaca ctcgtcacgg tattgtgttt aaagatggct ccaacggaca taaatcgctg
    16321 tttatggggc atgcgacccc gaaagcattt tatgaagccc tgaaagaggc aggtggtaca
    16381 ccgggcgaaa acatgacgat ggataataaa gaaacgactc atgtcacagg cagcaaactg
    16441 gatatttcgg tcaactggca aggggcggca aaaacgtatt ccttcgatga agtgattgtt
    16501 gacagtaatg gcaagaaact ggacatgcgc tttggcggta atttaacggc agcagaagag
    16561 aagaaaacgg gctgcctggt gtgtctggat agctgcccgg tcggcatcgt cagcaatgca
    16621 acatacactt atggtgcggt tgaaaaacga ggtgaagtta aattcaaagg caatgcctcg
    16681 gttctcccgg cggataacac gctggcaacg gttaccttta aaatcaccga ataaagccag
    16741 gataaaggat gatgaagatg caatcgcgaa aaatctggta ctaccgtata accctcatca
    16801 tcctgttgtt cgctatgctg ctggcatggg cgctgcttcc cggcgtccat gagtttatca
    16861 atcgcagcgt tgcggcgttt gccgccgtgg accaacaggg tatagaacgc tttattcagt
    16921 cttacggcgc actggcggca gttgtctcgt tcttgttgat gattttacag gccattctgc
    16981 accgctacct gcgtttttga tcacctttgc caatgcgtcg ctatttggcg cgttctgggg
    17041 cggcttgctg tcgtggacca gttcgatggc cggcgcggcg ctgtgctttt ttatcgccag
    17101 agtgatgggc cgcgaagtgg tggaaaaatt aaccggcaaa accgtgcttg acagtatgga
    17161 cggctttttc actcgctacg gcaaacacac tatcctagtc tgtcggttat tgccttttgt
    17221 ccctttcgat ccaatcagct atgctgccgg tttgacttca atccgttttc gctcgttttt
    17281 tatcgccacc gggcttggtc agttaccggc gactattgtt tattcctggg cgggcagcat
    17341 gttaacaggc ggtaccttct ggtttgtcac cggactgttt attctgtttg ccctgagcgt
    17401 ggtgattttt atggcgaaga aaatatggct tgagcgccag aagaggaatg actgatgggt
    17461 ttaccgccgc tgaacaaaat tcctttcatt ttacgtccgc aggcgtggct gcatcgtcgc
    17521 cattacggcg aggtgctaag cccgattcgc tggtgggggc ggatcccgtt tatcttttat
    17581 ttggtgtcaa tgtttgttgg ctggctggag cgcaaacgct caccgctcga tccggtagtg
    17641 cgatcactgg tcagcgcgcg cattgcgcaa atgtgcctgt gtgagttttg tgtggatatc
    17701 accagtatga aagtcgccga gcgtaccggc agcagcgata aactgctggc agtggctgac
    17761 tggcggcaaa gcccgctctt tagcgatgaa gaacggctgg cgcaggaata cgccgaagcc
    17821 gcaagcgtaa cgccgccaac ggtcgatgat gccctgcgca cccgactggc tacccatttt
    17881 gacgctcagg cactcaccga actgacggca ttgatcggcc tgcaaaatct gtcagcccgt
    17941 tttaattctg ccatggacat tcccgctcag gggctgtgcc gtattcctga aaaacgttct
    18001 taaggagaga tgatgcgcca ttgtgggtgg ttgctgggat tgttatcgct gttttctctg
    18061 gcaacacatg ccagtgactg gcaggaaatt aaaaatgagg ccaaagggca aaccgtctgg
    18121 tttaacgcct ggggcggcga taccgcaatt aaccgctatc tcgactgggt tagcggcgag
    18181 atgaaaaccc attacgctat aaacctgaag attgttcgtc tggcggatgc cgcagacgcg
    18241 gtgaagcgca ttcagaccga agctgctgcc ggacgtaaaa cgggcggctc ggtggatctg
    18301 ctctgggtga acggagaaaa cttccgcacc ttaaaagagg ccaatttatt acaaacgggc
    18361 tgggcggaga ctctgcccaa ctggcgctat gtcgacacac agctgccggt gcgggaagat
    18421 ttttcagtgc cgacacaagg tgcggaatcg ccctggggcg gcgcacaact gacgtttatc
    18481 gcccgccgcg atgttacgcc acagccacca caaacgccgc aagccttact ggagtttgct
    18541 aaagtcaatc ccggcacggt tacctatccg cgcccaccgg actttaccgg cacggcgttt
    18601 cttgaacaat tgctgattat gctgacgccc gatcccgcag cattaaaaga agcgccggac
    18661 gatgcgactt tcgcccgtgt cactgctccc ttgtggcaat atcttgatgc gctacatccg
    18721 tatttgtggc gcgaaggaaa ggatttcccg ccttcgcccg cgcggatgga tgctctgctg
    18781 aaagccggca cattgcgcct gtcgctgacc tttaaccccg cgcatgcgca gcaaaaaatc
    18841 gccagcggcg atttgccggc aaccagttac agttttggct ttcgcgaggg gatgattggc
    18901 aacgtgcatt tcgtcaccat tccagccaac gcgaatgcca gtgctgcggc gaaggtagtt
    18961 gccaatttcc tgctctcacc cgatgcgcaa ctgcgtaaag cagatcccgc tgtctggggc
    19021 gatccttctg ttctcgatcc gcaaaaactg cctgacgagc agcgcgaaat attgcaatca
    19081 agaatgccgc aggatctgcc gccggtactg gctgaaccgc acgcaggatg ggtgaatgca
    19141 ctggaacaag aatggttacg ccgttacggt acgcattaat ctttttgctg tgggcgatgg
    19201 tggcggtgat ttatgcaccg ctgatcccgg cagctctcac gctgatatcg cctgctttgt
    19261 cgttgacaca ctggcaggcg ttatttgccg atccacagtt accgcaggca ttactggcaa
    19321 cgctggtgtc gacaaccatc gcggcggtcg gggcattgtt gattgccctg ctggtgattg
    19381 tggccctgtg gcctgggccg aaatggcagc gtatgtgcgc ccgtctgccg tggctgctcg
    19441 ccattcccca tgtggctttt gccaccagcg ccctgctgct ctttgctgac ggagggctgc
    19501 tatatgacta tttcccgtat ttcactccgc caatggaccg atttggcatc ggtctgggcc
    19561 tcacccttgc agtgaaagaa agcgcatttc tgctgtggat cttagcggca gtattgagcg
    19621 aaaaacggct gttgcagcag gtaattgtgc tggattcgct gggctacagc cgctggcaat
    19681 gcctgaactg gctgctgttg ccctccatcg tgcccgcgct ggcaatggcg atgctggcga
    19741 ttgttgcctg gtcgctttcg gtcgtggatg tggcgattat tcttgggcca ggtaatccac
    19801 cgacgctggc agtaattagc tggcagtggt taactcaggg cgacgcggat caacaaacga
    19861 aaggcgcact cgccagtctg ctgctgatgc tgttactcgc cgcctacgtt ttgctgagct
    19921 atctgctatg gcgcagctgg cggcgcacta ttccccgcgt agatggcatt cgcaagcctg
    19981 ccacaccttt attaccaggc actacgctgg cgattttttt acccttaacc ggtgtgctgt
    20041 gtgtggttct gctggcgatc ctcgcggatc agtcgacgat caatagtgaa gcgctcatca
    20101 acagcctgac aatggggctg gtggcgacat tcatcgcttt gctcctgtta ctgctgtggc
    20161 tggaatgggg gccacagcgt cgccagttgt ggctctggtt gcccatttta ttacccgctc
    20221 tgccactggt ggcgggccag tacacgctgg cgctatggct gaacctggat ggaagctgga
    20281 cggcggtggt ctgggggcat ctgctgtggg taatgccgtg gatgctgttt atcctgcaac
    20341 ccgcctggca gcgcattgat tcacggttaa ttttgattgc gcaaacactg ggctggtcgc
    20401 gggccaaaat cttcttttac gtgaaatgtc cgcttatgct acgccctacg ctgattgcct
    20461 tcgcggtggg attttcagtc agtattgcgc agtatatgcc gacgctgtgg ctgggcgcgg
    20521 ggcgttttcc gacgctcacc actgaggcgg tggcattaag cagcggcggc agcaacggta
    20581 ttctcgccgc ccaggcttta tggcaactgc tatcaccgct tattattttt gccctgaccg
    20641 cgttagtcgc aaaatgggta ggttatgtca gacaaggact ccgctaatgc tctgcgtgaa
    20701 aaatgtttcg ctacgtttac cagaaagccg cttgctgaca aacgttaact ttacggtgga
    20761 taaaggtgac attgtcacgt taatggggcc gtctggctgt ggaaaatcca ctctgttttc
    20821 atggatgatt ggtgcactgg ctggacagtt ttcttgtaca ggtgagctat ggctcaatga
    20881 gcaacggatt gacatgctac ccaccgcaca gcgtcagatt ggcattcttt tccaggatgc
    20941 actgttattt gaccagttca gcgtcgggca aaatttactg ctggcgctac cggcgacact
    21001 taaagggaat gcccgacgta atgccgtgaa tgatgcactt gagcgttcag gccttgacgg
    21061 agctttccat caggatcctg ccactttgtc tggcggtcag cgagcgcgcg ttgctctact
    21121 acgcgccctt ctcgcccagc caaaagcgtt actcctggat gagccattca gccgtcttga
    21181 tgtggctctg cgcgataatt ttcgccagtg ggtgttcagc gaagttcgcg ccctggcgat
    21241 ccccgtcgtt caggtaacgc acgatctcca ggatgttcct gctgatagtt ctgttctgga
    21301 tatggcgcag tggtcagaaa attacaacaa actgcgataa cgcaaagttt ttctcaatgc
    21361 gtcagttcag aatggcgcac tcaaaactac aatgtcggga ttttcgatga aacgtgtttc
    21421 tcaaatgacc gcgctggcaa tggctttagg gctggcttgc gcttcttcgt gggccgctga
    21481 actggcgaag cctcttacac ttgaccaact tcagcaacaa aatggcaaag cgatagatac
    21541 tcgccccagc gcgttttata acggctggcc acaaacctta aatggccctt ctggtcatga
    21601 acctgccgcc ttaaacctct ctgctagctg gctcgacaaa atgagcaccg aacagctcaa
    21661 cgcgtggatc aagcaacata acctgaaagc cgatgccccg gtggcgctgt acggtaatgg
    21721 caaagatgtc gacgccgtca aaacgcgact gcaaaaagca ggttttacgc atatctccat
    21781 tctgagtgac gcgctaagcg aaccttcccg tctacaaaaa ctgccgcact ttgagcagct
    21841 ggtttatccg caatggctgc acgacctgca acaaggtaaa gaggttacgg cgaaacctgc
    21901 cggagactgg aaagtcattg aagcggcctg gggcgctcct aagctttacc ttatcagcca
    21961 tattcccggc gctgactaca tcgataccaa cgaagtggaa agcgaaccgc tgtggaacaa
    22021 agtttctgat gaacaactaa aagcgatgct ggcaaaacac ggcattcgcc atgacaccac
    22081 ggtcattctg tacgggcgtg acgtatacgc tgcagcgcgt gtggcgcaga ttatgcttta
    22141 tgctggcgtg aaagatgtgc gcctgatgga tggcggctgg caaacctggt ccgacgcggg
    22201 actgcctgtt gagcgcggaa cgccaccgaa agtgaaagcg gaaccggatt tcggcgtgaa
    22261 gatcccggca caaccgcaac tgatgcttga tatggaacag gcccgtggac tgctgcatcg
    22321 ccaggatgca tcgctggtga gcattcgttc gtggccagaa tttatcggta cgaccagcgg
    22381 ttacagctat attaaaccaa aaggtgaaat agccggagca cgttggggac acgctggtag
    22441 cgactcgacg catatggaag atttccataa cccggatggc accatgcgta gcgccgatga
    22501 tattaccgct atgtggaaag catggaatat caaaccagat cagcaagttt cattctactg
    22561 cagcaccggc tggcgcgcgt ccgaaacctt tatgtacgca cgagcaatgg gctggaataa
    22621 cgtctccgtt tacgacggcg gctggtacga atggagcagc gatccaaaaa atccggttgc
    22681 aaccggtgaa cgcggcccgg acagcagcaa ataacattgc aattactgac gctggagcga
    22741 cttcagcgtc agatacccac tccatacccg cgtaaaggtt gtcatccagc acaacgcacc
    22801 gaagatccac gcaaaccacg caaaccatgc aaaccatgca gggaataaac atcccagcac
    22861 aaacagtaag atcgtttctg tgccttcggt taatcccccc agatagtaaa acgacttatg
    22921 tgcataaccg gggttatcaa tctgatgttt tgctgccagt gcagcaaagg cgagaaaact
    22981 gctgcccgta ccgataaacg caaacagcag ccagccgcct gccagcgcat tttgctccgg
    23041 tgcagcaaga ataaaaccaa acggcaccag cgcgtaaaag agaaaatcga gagaaatatc
    23101 gagaaagccg cccgcgtcgg taagccctct gcgccgcgcc agcgcgccat ccagaccatc
    23161 aagcagacga ttcaacaaaa tgacgactag cgccgccaga taccagccca gagccagaaa
    23221 cggcagagcc agcacgccga tggcaaatcc cactaatgtt aaaccatctg gcgtaatgcc
    23281 cggtttatca agaacccgca cgcactgatg caacaacggt ttaatccggg gatgaagatg
    23341 gcggtctagc acaggcactc cttaaatata aagcctttct gattgagcaa cagtgcggat
    23401 attatggcat ttttcgctta tctgcccgtg tgtaatttat gaaaatgatt gaagttgttg
    23461 ccgccatcat tgaacgtgat ggcaaaattt tactcgcgca acgccccgct cagagcgaac
    23521 aggcgggatt atgggagttt gccggtggta aagtcgaact ggatgaaagc cagcagcagg
    23581 cgctggtgcg tgagttaaac gaagaactgg gcatcgaagc aactgtgggt gagtatgttg
    23641 ccagccatca gcgagaagtt tcgggccgga ttatccatct tcatgcctgg cacgtacccg
    23701 acttccacgg gacgttacag gcacatgaac atcaggcgct ggtctggtgc tcacctgaag
    23761 aggcgctgca atatccgctg gcccctgctg acattccatt attagaggcg tttatggctt
    23821 tacgcgccgc cagagcagcg gattagtgct aagggttttg tcatcccgct ggcattgcag
    23881 cagtattcct tcggctttaa ttaccgcccc ttcagaataa ttttgatcct gataaacgca
    23941 gcactgagta cagggctgcg ctgactgccc gcctgaactg aacacttctg gcggtacgtt
    24001 tacctccacg tccggacgat aatgcgggtt agccagtgca attaatggaa atgctaatac
    24061 tacggcgaac aatgctcgac tcacagggaa ctccttaacg ttattgtctc tgcaactgat
    24121 aacggtagcc gggtggcaaa actttagcgt ctgagttatc gcatttggtt atgagattac
    24181 tctcgttatt aatttgcttt cctgggtcat ttttttcttg cttaccgtca cattcttgat
    24241 ggtatagtcg aaaactgcaa aagcacatga cataaacaac ataagcacaa tcgtattaat
    24301 atataagggt tttatatcta tggatcagac atattctctg gagtcattcc tcaaccatgt
    24361 ccaaaagcgc gacccgaatc aaaccgagtt cgcgcaagcc gttcgtgaag taatgaccac
    24421 actctggcct tttcttgaac aaaatccaaa atatcgccag atgtcattac tggagcgtct
    24481 ggttgaaccg gagcgcgtga tccagtttcg cgtggtatgg gttgatgatc gcaaccaggt
    24541 acaggtcaac cgtgcatggc gtgtgcagtt cagctcagcc atcggcccgt acaaaggcgg
    24601 tatgcgcttc catccgtcag ttaacctctc cattctcaaa ttcctcggct tcgaacaaac
    24661 cttcaaaaat gccctaacta ccctgccgat gggcggtggt aaaggcggta gcgattttga
    24721 cccgaaaggt aaaagcgaag tcgaagtgat gcgtttctgc caggcgctga tgaccgagct
    24781 ttatcgtcat ctgggcgcgg ataccgacgt tccggcaggt gatatcggcg ttggtggtcg
    24841 tgaagtcggc tttatggcgg ggatgatgaa aaagctctcc aacaataccg cctgcgtctt
    24901 caccggtaag ggcctttcat ttggcggtag tcttattcgc ccggaagcta ccggctacgg
    24961 tctggtttat ttcacagaag caatgttaaa acgccacggt atgggttttg aagggatgcg
    25021 cgtttccgtt tctggctccg gcaacgtcgc ccagtacgct atcgaaaaag cgatggaatt
    25081 tggtgctcgt gtgatcactg cgtcagactc cagcggcact gtagttgata aaagcggatt
    25141 cacgaaagag aaactggcac gtcttatcga aatcaaagcc agccgcgatg gtcgagtggc
    25201 agattacgcc aaagaatttg gtctggtcta tctcgaaggc caacagccgt ggtctgtacc
    25261 ggttgatatc gccctgcctt gcgccaccca gaacgaactg gatgttgacg ccgcgcatca
    25321 gcttatcgcc aatggcgtta aagccgtcgc cgaaggggca aatatgccga ccaccatcga
    25381 agcgactgaa ctgttccagc aggcaggcgt gctgtttgca ccgggtaaag cggctaatgc
    25441 tggcggtgta gcaacgtcag gccttgaaat ggcgcaaaac gctgcgcgcc tgggctggaa
    25501 agccgagaaa gttgacgcac gtttgcatca catcatgctg gatatccacc atgcctgtgt
    25561 tgagcatggt ggtgaaggtg agcaaaccaa ctacgtgcag ggcgcgaaca ttgccggttt
    25621 tgtgaaggtt gccgatgcga tgctggcgca gggtgtgatt taagttgtaa atgcctgatg
    25681 gcgctacgct tatcaggcct acaaatgggc acaattcatt gcagttacgc tctaatgtag
    25741 gccgggcaag cgcagcgccc ccggcaaaat ttcaggcgtt tatgagtatt taacggatgt
    25801 tgctccccag ggaacatttc ttatgggcca acggcatttc ttactgtagt gctcccaaaa
    25861 ctgcttgtcg taacgataac acgcttcaag ttcagcatcc gttaactttc tgcgatagca
    25921 gcagatatgc cagtaaagaa atcccattag actatttttt tgataatctt cttcgctttc
    25981 gaacaactcg tacgcctttc gagaagcaag cattatataa tgccaggcca gttcttcttc
    26041 aattgtcccg ttttgaaaag ctgtgcttga tatcgagatc atccatgata attccgccgc
//
LOCUS       DAJVTL010000058        24767 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.058, whole genome shotgun sequence.
ACCESSION   DAJVTL010000058 DAJVTL010000000
VERSION     DAJVTL010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24767
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.058"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..131)
                     /locus_tag="OQQ26_002249"
     CDS             complement(<1..131)
                     /locus_tag="OQQ26_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate-CoA oxygenase subunit PaaI"
                     /protein_id="HCS1857689.1"
                     /translation="MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGL"
     gene            complement(140..427)
                     /gene="paaB"
                     /locus_tag="OQQ26_002250"
     CDS             complement(140..427)
                     /gene="paaB"
                     /locus_tag="OQQ26_002250"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit B"
                     /protein_id="HCS1857690.1"
                     /translation="MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYT
                     RRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM"
     gene            complement(439..1368)
                     /gene="paaA"
                     /locus_tag="OQQ26_002251"
     CDS             complement(439..1368)
                     /gene="paaA"
                     /locus_tag="OQQ26_002251"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit A"
                     /protein_id="HCS1857691.1"
                     /translation="MNQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIV
                     GMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRM
                     KYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQR
                     QGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLAWKIKRFTN
                     DELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQ
                     ERLDAKRKAWEEGTWVREAALAHAQKQHARKVA"
     gene            1653..3698
                     /gene="paaZ"
                     /locus_tag="OQQ26_002252"
     CDS             1653..3698
                     /gene="paaZ"
                     /locus_tag="OQQ26_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation bifunctional
                     protein PaaZ"
                     /protein_id="HCS1857692.1"
                     /translation="MQQLASFLSGTWQSGRGRSRLIHHAISGEALWEVTSEGLDMAAA
                     RLFAIEKGAPALRAMTFIERAAMLKAVAKHLLSEKERFYALSAQTGATRADSWVDIEG
                     GIGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHVLTSKSGVAVHINAFNFP
                     CWGMLEKLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLICGSAGDL
                     LAHLDSQDVVTFTGSAATGQMPRVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEF
                     ALFIREVVREMTTKAGQKCTAIRRIIVPQVLVNAVSDALVARLQKVVVGDPAQEGVKM
                     GALVNAEQRADVQEKVNTLLAAGCEIRLGGQADLSAAGAFFPPTLLYCPQPDETPAVH
                     ATEAFGPVATLMPAQNQQHALQLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQ
                     ILNEESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRAVKHYMQRTAVQGSPTMLAA
                     ISKQWVRGAKVEEDRIHPFRKYFEELQPGDSLLTPRRTMTEADIVNFACLSGDHFYAH
                     MDKIAAAESIFGERVVHGYFVLSAAAGLFVDAGVGPVIANYGLESLRFIEPVKPGDTI
                     QVRLTCKRKTLKKQRSAEEKPTGVVEWSVEVFNQHQTPVALYSILTLVARQHDDFVD"
     gene            3946..6217
                     /gene="tynA"
                     /locus_tag="OQQ26_002253"
                     /pseudo
     CDS             3946..6217
                     /gene="tynA"
                     /locus_tag="OQQ26_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415904.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="primary-amine oxidase"
     gene            complement(6276..7775)
                     /gene="feaB"
                     /locus_tag="OQQ26_002254"
                     /gene_synonym="maoB"
                     /gene_synonym="padA"
     CDS             complement(6276..7775)
                     /gene="feaB"
                     /locus_tag="OQQ26_002254"
                     /gene_synonym="maoB"
                     /gene_synonym="padA"
                     /EC_number="1.2.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetaldehyde dehydrogenase"
                     /protein_id="HCS1857693.1"
                     /translation="MTEPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLPIFNPAT
                     GQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELA
                     QLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQVWTR
                     KEPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGI
                     PDGVFNVVTGAGAVCGAALTSHPHVAKISFTGSTATGKGIARTAADRLTRVTLELGGK
                     NPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASLRIYIEAPLFDTLVSGFEQAVKSLQ
                     VGPGMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVN
                     PDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYDLTASVWTQNLSRALEYSDRL
                     QAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVCVRY"
     gene            8011..8919
                     /gene="feaR"
                     /locus_tag="OQQ26_002255"
     CDS             8011..8919
                     /gene="feaR"
                     /locus_tag="OQQ26_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FeaR"
                     /protein_id="HCS1857694.1"
                     /translation="MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGL
                     KLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDA
                     SRPCSLYWQESSSKQISLLLPRTLLEQYFPHQKPVCAERLDADLPMVQLSHRLLQESM
                     NNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPE
                     WIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGF
                     SDQSHFSTVFKQRFGMTPGEYRRKFR"
     gene            complement(9091..9420)
                     /locus_tag="OQQ26_002256"
     CDS             complement(9091..9420)
                     /locus_tag="OQQ26_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707676.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HCS1857695.1"
                     /translation="MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVA
                     LKPDAETAKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGIN
                     GKWVRKF"
     gene            complement(9425..9610)
                     /locus_tag="OQQ26_002257"
     CDS             complement(9425..9610)
                     /locus_tag="OQQ26_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HCS1857696.1"
                     /translation="MKILLAALTSSFMLVGCTPRIEVAAPKEPITINMNVKIEHEIII
                     KADKDVEELLETRSDLF"
     gene            complement(9607..12246)
                     /locus_tag="OQQ26_002258"
     CDS             complement(9607..12246)
                     /locus_tag="OQQ26_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HCS1857697.1"
                     /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI
                     ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKL
                     PQTEQSPAAPKTLAQWQAMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
                     KVKFQGQLKGQQLTVSELDVVAFENQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
                     EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS
                     GRLGVKVDNWQAGLENALVSGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPMQLTG
                     EAKQADLILYARLPAQVSGSLSDPTLTFEPGALLRSKGRVIDSLDINEIRWPLAGVKV
                     TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
                     DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
                     SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
                     GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
                     MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
                     EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
                     SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
                     RSSTNINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQA
                     WLEQNARLPGNDCPQGKEREEKQ"
     gene            12454..13443
                     /gene="ldhA"
                     /locus_tag="OQQ26_002259"
     CDS             12454..13443
                     /gene="ldhA"
                     /locus_tag="OQQ26_002259"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCS1857698.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
                     RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEA
                     AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
     gene            13554..13976
                     /gene="hslJ"
                     /locus_tag="OQQ26_002260"
     CDS             13554..13976
                     /gene="hslJ"
                     /locus_tag="OQQ26_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HCS1857699.1"
                     /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP
                     VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD
                     NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN"
     gene            complement(13973..14239)
                     /locus_tag="OQQ26_002261"
     CDS             complement(13973..14239)
                     /locus_tag="OQQ26_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HCS1857700.1"
                     /translation="MRAAFWVGCAALLLSGCSSEPVQQATAAHVAPGLKASMSSSGEA
                     NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            14501..18025
                     /gene="nifJ"
                     /locus_tag="OQQ26_002262"
     CDS             14501..18025
                     /gene="nifJ"
                     /locus_tag="OQQ26_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HCS1857701.1"
                     /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
                     VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DTYFQSREATNPWYNSVYDHVEQAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAI
                     GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGKRETLPRVIGGRYGLSSKEFGPDCVLAVFSELNAAKPKARF
                     TVGIYDDVTNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
                     IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
                     FHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEVPLQPVNPHS
                     ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
                     IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
                     APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL
                     ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
                     STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
                     ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
                     GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
                     MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
                     TATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQPEVAEQL
                     WKDAAADLQKRYDFLAQMAGKAEKSNTD"
     gene            18391..19524
                     /gene="ompN"
                     /locus_tag="OQQ26_002263"
     CDS             18391..19524
                     /gene="ompN"
                     /locus_tag="OQQ26_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpN"
                     /protein_id="HCS1857702.1"
                     /translation="MKSKVLALLIPALLAADAAHAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL
                     KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
                     GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGLSATYDLGMGFSAGAAY
                     TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN
                     KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGTDNPAGVDDKDLVKYADVGAAY
                     YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF"
     gene            19665..20099
                     /gene="uspF"
                     /locus_tag="OQQ26_002264"
     CDS             19665..20099
                     /gene="uspF"
                     /locus_tag="OQQ26_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310024.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HCS1857703.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTNRVHVHVEEGSPKDRILEL
                     AKKIPAHMIIIASHRPDITTYLLGSNAATVVRHAECSVLVVR"
     gene            20675..21589
                     /gene="sitA"
                     /locus_tag="OQQ26_002265"
     CDS             20675..21589
                     /gene="sitA"
                     /locus_tag="OQQ26_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000949004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter substrate-binding
                     protein SitA"
                     /protein_id="HCS1857704.1"
                     /translation="MHSIKKVTMLLGCLALTCSIAFQASATEKFKVITTFTIIADMAK
                     NVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNG
                     VPEVIVSSGVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQ
                     RNADTYKAKITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINAD
                     QQGTPQQVRKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTEN
                     GPVPTYIDLLKVTTSTLVQGIKAGKREK"
     gene            21589..22416
                     /gene="sitB"
                     /locus_tag="OQQ26_002266"
     CDS             21589..22416
                     /gene="sitB"
                     /locus_tag="OQQ26_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter ATP-binding
                     protein SitB"
                     /protein_id="HCS1857705.1"
                     /translation="MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGS
                     GKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVM
                     MGRYGHMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQ
                     GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGT
                     VLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR"
     gene            22413..23270
                     /gene="sitC"
                     /locus_tag="OQQ26_002267"
     CDS             22413..23270
                     /gene="sitC"
                     /locus_tag="OQQ26_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitC"
                     /protein_id="HCS1857706.1"
                     /translation="MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
                     ALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFF
                     GLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF
                     DENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
                     RLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRR
                     AHKALEDRS"
     gene            23267..24124
                     /gene="sitD"
                     /locus_tag="OQQ26_002268"
     CDS             23267..24124
                     /gene="sitD"
                     /locus_tag="OQQ26_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitD"
                     /protein_id="HCS1857707.1"
                     /translation="MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMG
                     DAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGM
                     FAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS
                     FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRF
                     HIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNA
                     HTQDLLSPN"
     gene            complement(24325..>24767)
                     /locus_tag="OQQ26_002269"
     CDS             complement(24325..>24767)
                     /locus_tag="OQQ26_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706811.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HCS1857708.1"
                     /translation="TGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQGIEAWRTE
                     QEAKPFTFEWNGRIWNAGPNSLGRLYPVVMAAKSDIVRDVMTWGDADNQQVKLSMPEL
                     EELAAAMAQAQVERNDEIYRRQRELKEELNSLKDLNSVRNFIVE"
BASE COUNT         6169 a         6291 c         6051 g         6256 t
ORIGIN      
        1 tcgaggccaa tgtttgccag tgcgagatcg atttccagtt ccggtgcgtg accgcaccat
       61 tcacccaacc gctgggagag caccaggcag ttatcgccca ggcgcaaggt ataagccgtt
      121 aactgattca tttccgacct cacatgtgct caatgccatc agggatggtg taaaacgttg
      181 gatggcgata gaccttgctt tcagccggat caaaaaattc accgcgttct tccggttgcg
      241 aggcaacaat ttcactcgcc ttcaccaccc aaattgaaca tccttcgcta cgacgggtgt
      301 aagcatcacg ggcattttcc agtgccatcc gctcatcggc agcatgtaaa ctgccaacat
      361 ggcggtgtga taagccctgt ttgccacgca cgaaaacttc gtataacggc cagtaaacat
      421 tactcatttt gaatctcctt atgcgacctt acgggcatgt tgtttttgtg catgggccag
      481 cgctgcttcc cgtacccagg taccttcttc ccaggcttta cgtttggcgt cgagccgctc
      541 ctgattacaa attccgcgac cgtttatcac ttcgttaaac tcctgccagt cgatctcacc
      601 aaagcggtag tgcccgcttt cagtatcaaa atgcagatcc gggtcaggaa cggtcatacc
      661 gagcatttca acctgtggaa cggtgttatc cacaaaacgc tggcggagtt cgtcgttggt
      721 gaaacgtttg attttccagg cgagacttct ggcgctgttt ggcgagttat catcgtttgg
      781 cccgaacatc attaaggctg gccaccagaa acggttaatg gcgtcttgca acatctgctt
      841 ttgagcttcg ctgccctgcg ccagtgccat gcaggcttca aacccctgac gctggtgaaa
      901 actctcttct ttgcagattt tcaccattgc tctggcatac gggccataag aagttcggca
      961 taacgccacc tgattgacga tcgctgcgcc atccaccagc cagccgataa cgccgatatc
     1021 agcccaactc aatgtcggat aattaaagat ggaggaatat ttcatccgtc cgtcgagcat
     1081 tttttggtag atgtcttctc tggcgcagcc cagtgtttcg gcggcgctat agagatacag
     1141 accatgacct gcttcatcct gcactttggc caacagaatg gctttacgcc gcaaggttgg
     1201 tgcgcgagtg atccagttac cttcaggcaa cataccaaca atctcggagt gcgcatgctg
     1261 cccaatctgg cggatcagtg tctttcggta agcatcgggc atccagtcct gcggctcgat
     1321 agccgtttcc tgggctatcc gttgctcaaa gcgttcttct tggttcacgt catcaccttt
     1381 acgattccag ttttcgtgaa ttaattaaaa acgcgaatca cactgtttta tgaaagttac
     1441 acaatggtta actaaaatca caaattttgt atgcttgaac tgtgacggat ttcgcaccct
     1501 atttttataa atcattattt atcagtgcat taatgttttt cgcagttgct atacagatcg
     1561 catggttaac acttcgttaa aagatcactt gctttttatg attcgcgatt taactattag
     1621 caacagaaat gtgaaacatc tggagagtag cgatgcagca gttagccagt ttcttatccg
     1681 gtacctggca gtctggccgg ggccgtagcc gtttgattca tcacgctatt agcggcgagg
     1741 cgttatggga agtgaccagt gaaggtcttg atatggcggc tgcccgcctg tttgctattg
     1801 aaaaaggtgc cccagccctt cgcgctatga cctttatcga acgtgcggcg atgcttaaag
     1861 cggtcgctaa acatctgctg agtgaaaaag aacgtttcta tgctctttct gcgcaaacag
     1921 gcgcaacgcg ggcagacagt tgggttgata ttgaaggcgg tattgggacg ttatttactt
     1981 acgccagcct cggtagccgg gagctgcctg acgatacgct gtggccggaa gatgaattga
     2041 tccccttatc gaaagaaggt ggatttgccg cgcgccatgt actgacctcg aagtcaggcg
     2101 tggcggtgca tattaacgcc tttaacttcc cctgctgggg aatgctggaa aagctggcac
     2161 caacgtggct gggcggaatg ccagccatca tcaaacctgc caccgcgacg gcccaactga
     2221 ctcaggcgat ggtgaaatca attgtcgata gtggtcttgt tcccgaaggc gcaattagtc
     2281 tgatctgcgg tagtgcgggc gacttgttgg ctcatctgga cagccaggat gtggtgactt
     2341 tcacggggtc agcggcgacc ggacagatgc cgcgagttca gccaaatatc gtcgccaaat
     2401 ctatcccctt cactatggaa gctgattccc tgaactgctg cgtactgggc gaagatgtca
     2461 ccccggatca accggagttt gcgctgttta ttcgtgaagt tgtgcgtgag atgaccacaa
     2521 aagccgggca aaaatgtacg gcaatccggc ggattattgt gccgcaagta ttggttaatg
     2581 ctgtcagtga cgctctggtt gcgcgattac agaaagtcgt ggtcggtgat cctgcgcagg
     2641 aaggcgtgaa aatgggcgca ctggtaaatg ctgagcagcg tgccgatgtg caggaaaaag
     2701 tgaacacatt gctggctgca ggatgcgaga ttcgcctcgg tggtcaggcg gatttatctg
     2761 ctgcgggtgc cttcttcccg ccaaccttat tgtactgtcc gcagccggat gaaacaccgg
     2821 cggtacatgc aacagaagcc tttggccctg tcgcaacgct aatgccagca caaaaccagc
     2881 aacatgctct gcaactggct tgtgcaggcg gcggtagcct tgcgggaacg ctggtgacgg
     2941 ctgatccgca aattgcgcgt cagtttattg ccgacgcggc acgtacgcat gggcgaattc
     3001 agatcctcaa tgaagaatcg gcaaaagaat ccaccgggca tggctcccca ctgccacaac
     3061 tggtacatgg tgggcctggt cgcgcaggag gcggtgaaga attaggtggt ttacgggcgg
     3121 tgaaacatta catgcagcga accgctgttc agggtagtcc gacgatgctt gccgctatca
     3181 gtaaacagtg ggtgcgcggt gcgaaagtcg aagaagatcg tattcatccg ttccgcaaat
     3241 attttgagga gctgcaacca ggcgacagcc tgttgactcc ccgccgcaca atgacagagg
     3301 ccgatattgt taactttgct tgcctcagcg gcgatcattt ctatgcgcat atggataaga
     3361 ttgctgctgc cgaatctatt tttggtgagc gtgtggtaca tggatatttt gtgctttctg
     3421 cggctgcggg tctgtttgtc gatgccggcg tcggtccggt cattgctaac tacgggctgg
     3481 aaagcttgcg ttttatcgaa cccgtaaaac caggcgatac catccaggtg cgtctcacct
     3541 gtaagcgcaa gactctgaaa aaacagcgta gcgcagaaga aaaaccaaca ggtgtggtgg
     3601 aatggtcggt agaggtattc aatcagcatc aaaccccggt ggcgctgtat tcaattctga
     3661 cgctggtggc caggcagcac gatgattttg tcgattaatc ggtgaatgaa gggcaacggc
     3721 gaatagttgc ccttttattt caccaaattt tgtgacgttg tcacgttatg catgatgtgt
     3781 atctgtattt tcaggacacc tactgtatga aaagctggca cacctgccaa acaacctggc
     3841 aggtgcaggc aatccccttt acatcagtac tgataatgtg aacctgacta aaccgcccac
     3901 agagcgcggt tgctaacaag aacacaacat ctgacgaggt taataatggg aagcccctct
     3961 ctgtattctg cccgtaaaac aaccctggcg ttggcagtcg ccttaagttt cgcctggcaa
     4021 gcgccggtat ttgcccacgg tggtgaagcg catatggtgc cgatgtgcag tgggacgact
     4081 acgcccagat ctttaccctg attaaagatg gcgcgtacgt gaaagtgaag cctggcgcgc
     4141 aaacagcaat tgttaatggt cagcctctgg cactgcaagt accggtagtg atgaaagaca
     4201 ataaagcctg ggtttctgac acctttatta acgatgtttt ccagtccggg ctggatcaaa
     4261 cctttcaggt agaaaagcgc cctcacccac ttaatgcgct aactgcggac gaaattaaac
     4321 aggccgttga aattgttaaa gcttccgcgg acttcaaacc caatacccgt tttactgaga
     4381 tttccctgct accgccagat aaagaagctg tctgggcgtt tgcgctggaa aacaaaccgg
     4441 ttgaccagcc acgcaaagcc gacgtcatta tgctcgacgg caaacatatc atcgaagcgg
     4501 tggtggatct gcaaaacaac aaactgctct cctggcaacc cattaaagac gcccacggta
     4561 tggtgttgct ggatgatttc gccagtgtgc agaacattat taacaacagt gaagaatttg
     4621 ccgctgccgt gaagaagcgc ggtattactg atgcgaagaa agtgattacc acgccgctga
     4681 ccgtaggtta tttcgatggt aaagatggcc tgaaacaaga tgcccggttg ctcaaagtca
     4741 tcagctatct tgatgtcggt gatggcaact actgggcaca tcccatcgaa aacctggtgg
     4801 cggtcgttga tttagaacag aaaaaaatcg ttaagattga agaagatccg gtagttccgg
     4861 tgccaatgac cgctcgccca tttgatggcc gtgaccgcgt tgctccggca gttaagccta
     4921 tgcaaatcat tgagcctgaa ggtaaaaatt acaccattac tggcgatatg attcactggc
     4981 ggaactggga ttttcacctc agcatgaact ctcgcgtcgg gccgatgatc tccatcgtga
     5041 cttataacga caatggcacc aaacgcaaag tcatgtacga aggttctctc ggcggcatga
     5101 ttgtgcctta cggtgatcct gatattggct ggtactttaa agcgtatctg gactctggtg
     5161 actacggtat gggcacgcta acctcaccaa ttgctcgtgg taaagatgca ccgtctaacg
     5221 cagtgctcct taatgaaacc atcgccgact acactggcgt gccgatggag atccctcgcg
     5281 ctatcgcggt atttgaacgt tatgccggac cggagtataa gcatcaggaa atgggccagc
     5341 ccaacgtcag taccgaacgc cgggagttag tggtgcgctg gatcagtaca gtgggtaact
     5401 atgactacat ttttgactgg atcttccatg aaaacggcac tattggcatt gatgccggtg
     5461 ctacgggcat cgaagcggtg aaaggtgtta aagcgaaaac catgcacgat gagacggcga
     5521 aagatgacac gcgctacggc acgcttatcg atcacaatat agtgggtact acacaccaac
     5581 atatttataa tttccgcctc gatctggatg tagatggcga gaataacagc ctggtggcga
     5641 tggacccggt ggtaaaaccg aatactgccg gtggcccacg caccagtacc atgcaagtta
     5701 atcagtacaa catcggcaat gaacaggatg ccgcgcagaa gtttgatccg ggcacgattc
     5761 gtctgttgag taacctgaac aaagagaatc gcatgggcaa tccggtttcc tatcaaatta
     5821 ttccttatgc aggtggtact cacccggtag caaaaggtgc ccagttcgcg ccggacgagt
     5881 ggatctatca tcgtttaagc tttatggaca agcagctctg ggtaacgcgt tatcatcctg
     5941 gcgagcgttt cccggaaggc aaatatccga accgttctac tcatgacacc ggtcttggac
     6001 aatacagtaa agataacgag tcgctggaca atacagtaaa gataacgagt cgctggacaa
     6061 caccgacgcc gttgtctgga tgaccaccgg caccacacat gtggcccgcg ccgaagagtg
     6121 gccgattatg ccgaccgaat gggtacatac tctgcttaaa ccatggaact tctttgacga
     6181 aacgccaacg ctaggggcgc taaagaaaga taagtgattg tttcagacta aaaaaacggc
     6241 accaggtgcc gttttttact tatgagcgaa ccagattaat accgtacaca caccgactta
     6301 gtttcacacc aaccgtccag ccagtcgggg ccaaaatcac ggcctgttcc tgactgcttc
     6361 atcccaccaa acggtaagtt agcgtcaatt aaggtatgac tgtttaccca caccgtccct
     6421 gcctgtaagc gatcgctata ttccagagcc cgggagagat tttgcgtcca gacactggca
     6481 gttaagtcat attccgtgtc gtttgccagt tgtaacgcct cttctccatc cgctactcgc
     6541 accaggttaa ccaccggacc aaacacctct tcacgagtta aacgcaattt agcatcggga
     6601 tttaccacca gcgttggcgc aacataatac ccctctccgg ctggtccatt cgacccgcga
     6661 atcagctctg cttgctgtgc ctgcgcatcg tcgaggaatg aacacacttt gtcgcagtgc
     6721 gcacgagaaa ccaaagggtt aatctgtgca acaggtgaca tccccggtcc cacttgcaac
     6781 gattttaccg cctgctcaaa tccactaacc agcgtgtcaa acaacggcgc ttcaatataa
     6841 attcgcaaac tggcggcgca tacttgccct tgattcagga agcttccggt catcaagcct
     6901 tcaataaccc attgcggatc agcatctttt aatacaattg ccgggttttt accgcccagt
     6961 tccagcgtta cacgcgttaa gcgatcagca gcagttctgg caataccttt tcccgtcgcg
     7021 gttgaaccgg taaaactgat tttcgcaaca tgaggatgtg acgtcagggc cgcgccgcat
     7081 acagcaccgg ccccggtgac gacattaaaa acgccatcag ggataccagc ctcgctggcc
     7141 agttccgcca cgcgcaacat cgtcagtggc gtggtttccg aaggcttaat cacgattgaa
     7201 cagcctgctg ccagtgctgg catcaccttc cacatgccaa tcatcaacgg aaagttccat
     7261 ggcacaattc ccgctaccac gccaaccggc tctttacgcg tccagacctg ataacgcgcc
     7321 ccctggggta agggaatcga caagtccagc gttttacccg cgattttggt cgttaacccg
     7381 gcggtataac gcatccagtt cagcgtacag cccacttcaa aagcacggga aatggcaatt
     7441 gacttgcctt gctccagggt ttccagttgc gccagctcct cactgtgctg ctccaccaga
     7501 tcagcaaaac gtagcagaat acgttcacgc tctgcgggta atcgcccggc ccagcgacgc
     7561 gagacaaagg cccgccaggc agacatgact gcgttatcta catccgcttc gttggcatca
     7621 gcagtagacg caatttcttg cccggttgcc ggattaaaga tcggcaaccg tttttcactt
     7681 tgtgcggggc caggacgacc atcaatataa agaccgtgtt gacgatcgag aaactgttgg
     7741 acctggctta atactgctac atgcggctct gtcatcactt ttccttatta tttacccagt
     7801 gtgatttcag tgtacgcagc gacaagaaaa gtcacttttt tcgctgtgac attcgctttg
     7861 tcagctgtga caagctccgc aaatcgtgac aataaccgct tatgtctcta tgcctgacaa
     7921 gacttatttc ctatagtcag gctcattagc ttcgtttact gcaacacaaa tgcaacaata
     7981 aaaatacatt tcacagagcg aaaacgtgcc atgaaccccg cagtggataa tgagtttcag
     8041 caatggcttt cccaaatcaa tcaggtatgc ggaaatttta ccggacgcct gctgactgag
     8101 cgttacacgg gtgtactgga tacgcatttt gccaaaggac taaagctgag taccgtgaca
     8161 accagcgggg tgaatttatc ccgcacctgg caggaagtaa aaggcagcga cgatgcctgg
     8221 ttttacaccg tttttcagct tagtggtcag gcaataatgg agcaggatga gcgtcaggtg
     8281 cagattggcg ctggcgatat tacgttactc gatgcctcac gcccctgttc gctttactgg
     8341 caggagtctt cttctaaaca gatttcatta cttttgccac gcactctgct ggaacaatat
     8401 tttccccatc aaaaacctgt ctgcgcagaa agactggacg ctgacttacc catggtgcaa
     8461 ctcagtcatc gcctgttaca ggagagcatg aataatccgg cactttctga aacagaaagt
     8521 gaagctgcgc tacaggcgat ggtgtgtctg cttcgcccgg tacttcatca gcgggaatct
     8581 gtccaacctc gccgtgaacg tcagtttcaa aaagtggtta cgttgataga cgataatatt
     8641 cgcgaagaga tattacgccc ggagtggata gccggagaga caggtatgtc agtacgtagt
     8701 ttgtaccgaa tgtttgccga taaaggtttg gtagtcgcgc aatatattcg taaccgtcgt
     8761 ctcgattttt gtgcagatgc gattcgccat gccgcagatg atgaaaaact ggcaggcatc
     8821 ggctttcatt ggggattttc tgaccagagt catttttcaa cggtatttaa gcaacgcttt
     8881 gggatgacgc caggcgagta tcgacgtaaa ttccgctaac taattcgcgt tgcatgtact
     8941 gcaacgccaa ttagttaaaa cagatatttg actatgcatt tttcagggca aaaggcaatt
     9001 tgacaggagt ttttgaatat tcaccttgtt tcaggaaaat agatcaatcg ccttctcctg
     9061 tagcgttatc ccgatattgc ggttttgcta ttaaaatttt cgcacccatt taccgtttat
     9121 cccttgtaca tattcccccg gtttggcccg agctacgagc ttttgcccgg cgagtttcgc
     9181 gatatcatct accgacacat tattttgctt tgccagttgt tggtaactcg ctttacgttc
     9241 ggcattaatg tcggctacta atttcgctgt ttcagcatcc ggtttcagcg caaccagata
     9301 accataaaat gtttcaccta cccgcccctg agttctggct tcatccagag tcaatgccat
     9361 tacattgctg cttaccagcc caacaagaaa cgcacaaaga agtaatgttt tcttcatcat
     9421 cgcctcagaa aagatcgcta cgagtttcaa gcaactcttc gacatctttg tctgccttga
     9481 tgatgatctc atgctcaatt ttaacgttca tattgatagt gatcggttcc ttaggtgcag
     9541 caacttcaat gcgaggcgta cagccaacca gcataaaaga tgacgtcaac gcagccagta
     9601 aaattttcat tgtttttcct cacgctcttt tccttgcgga cagtcatttc ccggcagacg
     9661 tgcgttctgc tccaaccatg cctggagatt atcgccaaag cgtaaactgc gccacagcgt
     9721 aaaaatattc tcttcatgat ggtaattaag gtttaccgta ccgcttttac catcaacgcg
     9781 actggtacct gtaatgttgg cctgcatggt taataaaccg agattatcta aattaatatt
     9841 tgtcgatgaa cggctaattt ccatatagcg caaccagtta attgctgaac ccgcagtcat
     9901 attgtctttc accaccgcat ctgcggtgtc tttatccagc cgcaaggtca ttggcccgct
     9961 atttgccagc caaccatctt tcactatcca tttttcgttg tttagccata acggcaatgc
    10021 accactaaat gccccggaca tggcgaattg tttcggattg acggcgctaa ccagttcgct
    10081 ggatgagaga ttattcagcc gcaacagcgc cgggtcatgt tgcggcatac gtaattgttt
    10141 catcagcacg ttaccgccta acacatcgac gctaacatca gtcaacagca atggttcttc
    10201 ttcagtccac ggataacgcc cttgcaaatc agccgtaata tttttcgctg tcaccagatt
    10261 aatcacttcg gcaattcgca acgtaacggg gccgcgagtc cccagatgcc aggctccatc
    10321 ggcaaaacgg aaaggcagga caaaatcgac accgttaacc tgattatctg gcatccaggc
    10381 actaccgcct ttcaacacgc cgtgccctcc cgctcggaat ccttgttcag gcgcagcaga
    10441 aaatgcaacc tgagcataca gttcaccatc gcgtaagttc atcttccagt cgggtggcac
    10501 cagcggctgg aatacagtca gtgattgttt aggccaccag gcgttaccgc gcagacgaat
    10561 accgtcccag cgaccattta cccgaaccgg gccaatctca ccagcatgta aatcgccttt
    10621 aaagaggaaa tacgtcggat cgcgcccatc gacgctaaat tttaaggttg atggcggtaa
    10681 cacactgccg ccagtgaaca gcgtttgccc ggcgtccagt gacagcgcgc cgctgaagga
    10741 gggatgctgt gcgtcacgta cccagacgac gggcttgtcg agaattaatc gcggcttttc
    10801 taccgtcatc gtaccgtatt gtaactggtc gaaaccggtg gagagatcgg tcagcgtaat
    10861 cgtgctgtca tgccactcac cttttcctgc gacatcccag gtggcattca tcggtgtaaa
    10921 actccctttt ccccagtagc gccactgcca gcggccagcg tcagggagaa aatcattcgc
    10981 cagaccatcc atatgcagca cgaaatcgcc cagttcattt tcatgcgcct gcaaaatggc
    11041 ctgcaaacgt ccgtcaacac cacgttgggt gacttttaca cccgctaaag gccagcggat
    11101 ttcattgatg tccagcgaat cgatgactct tccctttgaa cgaagtaacg cgcctggctc
    11161 aaaggtcagc gttgggtcag acagacttcc acttacctgc gcaggtaaac gggcatataa
    11221 aatgaggtcc gcctgtttcg cttcaccggt cagttgcata ggcagctggc tgttatccat
    11281 gcttaatttt cctgggccaa aatttagcac cgcgttgcct ttacccgctt gcccctgggt
    11341 cagcacacta agtcgtccgc tgaccagagc gttctcgagc cctgcctgcc agttgtcgac
    11401 tttaacaccc agtcggccac tcaaaggaaa acctgcatac ggccaactcc agcgaccatc
    11461 gcttacggtc aattgttgac gcgtaatttg ccacggcaaa tcgagcaacg gatcgccgtt
    11521 atcccgtgcc agcacaatca attgcccgct attttcctgc cagtccagtt cggcatccac
    11581 cagtgacggt tcctgcggca agtttaacgt cgcagtagca tgaccactta caggaagtcc
    11641 atccggcacg agcggcatag taaattcccc caccagtttt accggcggct gattttcaaa
    11701 cgcgacgaca tccagttcgc tgactgtaag ttgttgccct ttcaactggc cttgaaattt
    11761 aactttttcg ccctgataac gcagttgctg gatatcagag gttaatgcga gagagagttt
    11821 tccctgccat tcctgccagg gagaaaaaat cagtttatcg atattgatcc aggtgttagg
    11881 caacatggcc tgccactgcg cgagggtttt tggagcagct ggcgattgct ccgtctgcgg
    11941 caatttcgcc agacaagcag aatcaagttc taccgtgccg acgttcaata accagcggct
    12001 cggatgtgaa aggctggcgt tggtgatatg cgcaagctga caatctccca ccagataacg
    12061 gagatcggga atgattaaac ctttacgcgt aatgcgtggg ctttcatcta atgcaatacg
    12121 tgtcccgagc ggtagccaga tgcccgccag cgtgggaacc cacagcccga gcgtcatcag
    12181 cagcgtcaac ggcacaagaa taatcagtaa taacagcgcg agaacggctt tatatttacc
    12241 cagcatgggt agttaatatc ctgatttagc gaaaaattaa gcattcaata cgggtattgt
    12301 ggcatgttta accgttcagt tgaaggttgc gcctacacta agcatagttg ttgatgaatt
    12361 tttcaatatc gccatagctt tcaattatat ttgaaatttt ataaaatatt tttagtagct
    12421 tagatgtgat tcaacatcac tggagaaagt cttatgaaac tcgccgttta tagcacaaaa
    12481 cagtatgaca agaagtacct gcaacaggtg aacgagtcct ttggctttga gctggaattt
    12541 tttgactttc tgctgacgga aaaaaccgct aaaacggcca atggctgcga agcggtatgt
    12601 attttcgtaa acgatgacgg cagccgcccg gtgctggaag agctgaaaaa gcacggcgtt
    12661 aaatatatcg ccctgcgctg tgccggtttc aataacgtcg accttgacgc ggcaaaagaa
    12721 ctggggctga aagtagtccg tgttccagcc tatgatccag aggccgttgc tgaacacgcc
    12781 atcggtatga tgatgacgct gaaccgccgt attcaccgcg cgtatcagcg tacccgtgac
    12841 gctaacttct ctctggaagg tctgaccggc tttactatgt atggcaaaac ggcaggcgtt
    12901 atcggtaccg gtaaaatcgg tgtggcgatg ctgcgcattc tgaaaggttt tggtatgcgt
    12961 ctgctggcgt tcgatccgta tccaagtgca gcggcgctgg aactcggtgt ggagtatgtt
    13021 gatctgccaa ccctgttctc tgaatcagac gttatctctc tgcactgccc gctgacaccg
    13081 gaaaactacc atctgttgaa cgaagccgcc ttcgatcaga tgaaaaatgg cgtgatgatc
    13141 gtcaatacca gtcgcggtgc attgattgat tctcaggcag caattgaagc gctgaaaaat
    13201 cagaaaattg ggtcgttggg tatggacgtc tatgagaacg aacgcgatct attctttgaa
    13261 gataaatcca acgacgtgat ccaggatgac gtattccgtc gcctgtctgc ctgccacaac
    13321 gtgctgttta ccgggcacca ggcattcctg acagcagaag ctctgaccag tatttctcag
    13381 actacgctgc aaaacttaag caatctggaa aaaggcgaaa cctgcccgaa cgaactggtt
    13441 taatcttgcc gctcccctgc attccagggg agcttattca gataatcccc aaagaccttt
    13501 catcttctat tcttaaaata gccctgagtc agaaactgta attgagaacc acaatgaaga
    13561 aagtagccgc gtttgttgcg ctaagcctgc tgatggcggg atgtgtaagt aatgacaaaa
    13621 ttgctgttac gccagaacag ctacagcatc atcgctttgt gctggaaagc gtaaacggta
    13681 agcccgtgac cagcgataaa aatccgccag aaatcagctt tggtgaaaaa atgatgattt
    13741 ccggcagcat gtgtaaccgc tttagcggtg aaggcaaact gtctaatggt gaactgacag
    13801 ccaaagggct ggcaatgacc cgtatgatgt gcgctaaccc gcagcttaat gaactcgata
    13861 acaccattag cgaaatgctg aaagaaggtg cacaagtgga tctgaccgcg aaccagttaa
    13921 cgctggcgac cgcgaaacag acattaactt ataagctggc ggatttaatg aattaatagc
    13981 tgccacagct cccggcggca agtgactgtt cgctacagcg tttgccgttg ggtaatgcac
    14041 acatcccaat cgccgtacca tccagttgac gggcaacaga aagcgaaccg ccgatcattg
    14101 cacaatttgc ttctccacta ctggacatcg acgcttttaa acctggcgct acgtgcgccg
    14161 cagtcgcctg ctgaacaggt tcactactac accccgacaa caataaagcg gcacacccta
    14221 cccaaaacgc tgctcgcatc ttttcttcct ctgatcttca agccaaacga caccgccata
    14281 aataataggc agcacagagg gcggcgtcgc gcgttgcccc gcatttttac ttttttatgg
    14341 ctattttttt gccctctgtt tgatcaaaac attcattact ctgatgtggg ggacacaaaa
    14401 gcgaaaatgc agaagaaagc catttgctaa aattgaagga ttactactgg gcgcgcagca
    14461 atttcgtgcg cccctcattt gcgcaatgta agggtgtcat atgattacta ttgacggtaa
    14521 tggcgcggtt gcttcggtgg cgtttcgcac cagtgaagtt atcgccatct accctattac
    14581 ccccagttcc acgatggcag aacaggctga tgcctgggcc ggaaacggct taaagaacgt
    14641 ttggggagac acaccacgcg tggttgaaat gcagtcggaa gcgggtgcta tcgctaccgt
    14701 gcatggcgct ttgcagacgg gtgccctttc aacatcgttt acgtcatcgc agggtttgct
    14761 gctgatgatc ccgacgctgt acaaactggc aggcgaactg acgccatttg tcctgcatgt
    14821 agcggcacgt acagttgcca cacatgcact ttctattttt ggcgatcatt ccgacgttat
    14881 ggcggtgcgc cagacgggtt gcgcgatgtt gtgtgcggca aacgtccagg aagcgcaaga
    14941 ctttgctctc atttcgcaca tcgcgacgct gaaaagccgc gtgccattta ttcatttctt
    15001 tgatggtttc cgcacgtccc acgaaatcaa taaaattgtc ccgctggccg atgacactat
    15061 tcttgatctc atgccgcagg ccgaaattga tgctcatcgc gcccgggcgc tcaacccgga
    15121 acatccggtg atccgcggta cgtccgccaa tcctgacact tatttccagt ctcgcgaagc
    15181 caccaacccc tggtacaact cggtctatga ccatgttgaa caggcgatga atgatttcgc
    15241 tgccgcgaca ggtcgtcagt atcagccgtt tgagtattac gggcatccgc aagcggaacg
    15301 ggtgattatc ctgatgggct ctgccattgg cacctgtgaa gaagtggttg atgaattgct
    15361 aacccgtggc gaaaaagtcg gcgtgctgaa agttcgcctg taccgcccct tctccgctaa
    15421 acatttactg caagctctgc cgggatccgt acgcagcgtg gcggtactgg acagaaccaa
    15481 agaacccggt gcccaggcag aaccgctcta tctggatgtg atgaccgcac tggcagaagc
    15541 ctttaataat ggcaagcgcg aaactctgcc ccgtgtcatt ggtgggcgct atggtctttc
    15601 atccaaagaa tttggcccgg actgtgtact ggcggtattt tccgagctca acgcggctaa
    15661 accgaaagcg cgctttacgg ttggtattta cgatgatgta accaatctgt cactgccgtt
    15721 gccggaaaac actctgccaa actcggcgaa acttgaagcc ttgttttatg gccttggtag
    15781 tgatggcagc gtttccgcga ccaaaaacaa tatcaagatt atcggtaatt ccacgccgtg
    15841 gtacgcacag ggttattttg tttacgactc caaaaaagcg ggcggcctga cggtttctca
    15901 ccttcgtgtg agcgaacagc cgattcgttc cgcttatctc atttcccagg ctgattttgt
    15961 tggctgccac cagttgcagt ttatcgataa atatcagatg gctgagcgtt taaaacctgg
    16021 cggcattttc ctgctcaaca cgccgtacag cgcagatgaa gtgtggtcgc gcttgccgca
    16081 ggaagttcag gccgtgctaa accagaaaaa agcgcgtttc tatgtgatta acgcggcgaa
    16141 aatcgcccgc gaatgtggcc tggcggcccg tattaatacc gtcatgcaga tggctttttt
    16201 ccatctgacg caaattctgc ctggcgatag cgccctcgca gaattgcagg gtgcgattgc
    16261 caaaagttac agtagcaaag gtcaggatct ggtggaacgc aactggcagg ctctggcgct
    16321 ggcgcgtgaa tccgtagaag aagttccgtt gcaaccggta aatccgcaca gcgccaatcg
    16381 accgcctgtg gtttccgatg ccgctcctga tttcgtgaaa accgttaccg cggcgatgct
    16441 cgccgggctt ggtgatgccc tccccgtttc ggcgctgccg ccagacggca cctggccgat
    16501 gggcaccaca cgctgggaaa aacgcaatat cgccgaagag atccccatct ggaaagagga
    16561 actctgtacc caatgtaacc actgcgtcgc tgcttgccca cactccgcta ttcgcgcaaa
    16621 agtggtgcca cctgaagcga tggaaaacgc ccctgccagc ctgcattcgc tggatgtgaa
    16681 atcgcgtgat atgcgcgggc agaaatatgt cttgcaggtg gctccggaag attgcaccgg
    16741 ttgtaacctg tgcgtcgaag tttgcccggc gaaagaccgt cagaatccag agattaaagc
    16801 catcaatatg atgtcgcgcc tggaacatgt cgaagaagag aaaatcaatt acgatttctt
    16861 cctcaacctg ccagaaatcg accgtagcaa actggaacgt attgatattc gtacatcgca
    16921 gctgattaca ccgctgtttg aatattccgg tgcttgctcc ggttgtggcg agacgccgta
    16981 tattaaattg ctgactcagc tctatggcga ccggatgttg atcgctaacg ccaccggctg
    17041 ttcttcaatt tatggcggta acctgccctc tacaccgtat accaccgatg ccaacggtcg
    17101 tgggccggca tgggcgaact ctctatttga agataatgcc gaatttggcc ttggtttccg
    17161 cctgacggtc gatcaacacc gtgtccgcgt gctgcgtctg ctggatcaat ttgccgataa
    17221 aatcccggcg gaattactga cggcgttgaa atcagacgcc acgccagagg ttcgtcgtga
    17281 acaggttgca gctttacgcc agcaactcaa cgatgttgcc gaagcacatg aactgctacg
    17341 tgatgcagat gcactggtgg aaaaatcaat ctggctgatt ggtggtgatg gctgggctta
    17401 cgatatcggc tttggcggtc tggatcatgt attgagtttg acggaaaacg tcaacattct
    17461 ggtgctggat acgcaatgct attccaacac cggtggtcag gcgtcgaaag cgacaccgct
    17521 gggtgcagta actaaatttg gcgagcacgg caaacgtaaa gcgcgtaaag atcttggcgt
    17581 cagtatgatg atgtacggtc atgtttatgt ggcgcagatt tctctcggcg cgcagctgaa
    17641 ccagacggtg aaagcgattc aggaagcgga agcgtatccg gggccatcgc tgatcattgc
    17701 ttatagcccg tgtgaagagc atggttacga tctggcactc agtcacgacc agatgcgcca
    17761 actcactgcc accggcttct ggccgctata tcgctttgat ccgcgtcgtg ccgatgaagg
    17821 caaactgccg ctggcactgg attcacgccc gccgtcagaa gcactggaag aaacgttact
    17881 tcatgagcag cgtttccgtc ggctgaattc gcagcagcca gaagtggcag aacagttatg
    17941 gaaagatgct gcagctgatt tgcaaaaacg ctatgacttc ctggcacaaa tggccggaaa
    18001 agcggaaaaa agcaacaccg attaaatgct ctggataagg attatccaat tctaaaaaaa
    18061 agcccggacg actgttcggg cttgtctttt tatatgttgg aaaatcagtg gcaatgcaat
    18121 ggcccaacag aaaataaaat ctgtgacaat aaaggcatat aacccgcgca gaataacgta
    18181 tagcaaatta aaagtataat ttttattttg tatgtattat cttcaataca ttcaccagac
    18241 ttattctcat ttcaggagaa ttatttgatt aaggttttac ttaaggcgta acaaatgata
    18301 tttatcggct aactgaactt ctcctttagg atgttttcac tccccgaaat ggggataaaa
    18361 ggcaaataaa ataactaaag gatttattca atgaaaagca aagtactggc acttttaatt
    18421 cctgccctgc tcgccgcaga tgctgcacat gcagccgaag tttataataa agacggcaac
    18481 aaattagatc tgtatggcaa agttgatggc ctgcattatt tttctgataa ttcagcgaaa
    18541 gatggcgatc agagctatgc gcgtctgggt tttaaaggcg aaacccaaat taacgatcaa
    18601 ctcactggct acggtcaatg ggaatacaat attcaggcaa acaacactga atcttcaaaa
    18661 aaccagtcat ggacccgtct ggcatttgcc gggctgaaat ttgcagatta cggttctttc
    18721 gattacggac gtaattatgg cgtaatgtac gacatcgaag gctggaccga tatgctgcct
    18781 gaatttggcg gtgactctta taccaatgca gacaacttta tgactggtcg agccaatggc
    18841 gtcgcgactt atcgtaatac tgatttcttc ggtctggtaa atggtctgaa cttcgcggtg
    18901 cagtatcaag gtaacaacga aggagccagt aatggtcagg aaggcaccaa caacggacgt
    18961 gatgttcgcc atgaaaacgg tgacggctgg ggtctttccg caacatatga tttaggcatg
    19021 ggctttagcg ctggtgcggc atacacctct tctgaccgca ccaatgacca ggttaaccat
    19081 actgcggcgg gtggtgataa agcagacgcg tggactgctg ggctaaaata cgatgctaac
    19141 aatatttacc tggcaaccat gtattcagaa acgcgtaata tgaccccgtt tggcgacagc
    19201 gattatgctg tggcaaacaa aacccagaac tttgaagtta ctgcacagta ccaatttgat
    19261 tttggtctgc gtccggcagt ctctttcctg atgtctaaag gccgtgacct gcacgctgcc
    19321 ggtggtacag acaacccggc aggtgttgat gataaagatc tggttaaata cgccgatgtt
    19381 ggcgcggctt actatttcaa taaaaacatg tccacttatg ttgactataa aatcaacctg
    19441 ttggatgaag atgacagttt ctacgctgcc aacggcatct ctaccgatga tattgtcgct
    19501 ttaggtttgg tttatcagtt ctaaatcctc ctgcccgctg ttatggcggg ctttttctgc
    19561 ttattcttcc tcctttgatc taaattaaaa atgtgaactc cgtcattaca caaaaagtgt
    19621 catctggcgt tacactttat gcggatacta aaacaggagg ttttatgaac agaacgattc
    19681 ttgtccctat cgatatttcc gattcagaat taactcaacg cgtgattagc cacgttgagg
    19741 cagaggcaaa gattgacgat gcagaggttc atttcctgac ggtaatacct tcactgccct
    19801 actatgcctc tctgggttta gcgtattccg cagaattacc ggcaatggat gacctgaaag
    19861 cggaagccaa atcgcaactg gaagagatca ttaaaaaatt taaactgcca accaacagag
    19921 tgcatgtcca tgttgaggaa ggctcgccca aagaccgcat tctggaattg gcgaagaaga
    19981 tccccgctca tatgatcatc attgcttccc atcgaccgga tatcaccact tatctgctcg
    20041 gttctaacgc cgcaactgtc gtgcgtcacg cagagtgctc cgtgctggtt gtgcgctgac
    20101 actaacgccc gcacattgct gcgggctttt tgattcattt cgcaaatgtg ctgacatttt
    20161 cccctctaat ccgtaccata cacgccacag tttttatatc agatttctta tgctgggcgt
    20221 tccggcatga cgcatactct tctgatgcca tataacgaat tgagtcgctt ttaaatgtcg
    20281 caaaatcaag aaattagtaa gaaagaacaa tacaacctga acaagtaagg gcaaaaatca
    20341 caactatctg actcataagt attttattta tttttcaata tgttaaacat tatcagcgac
    20401 aacaataagc tacgataacc cactcttttt ttgccccttc tacagcgttt tgccccattt
    20461 ttgccatcaa caattttcct cataaagtca tttcaaagcc taatagctgc tctacttttt
    20521 tcctcaatat catgtcgcca gcaggaaaca acctaatccc tgttttaggc ctcaaagctg
    20581 ttaatgataa tcgttttcat tttgtatagg ttatgctata aaacatagcc gttgctatgt
    20641 ttgttctaat tttgctcact ataggtacta aattatgcac tcaataaaaa aagtaaccat
    20701 gctcttgggg tgcctcgccc tcacctgctc gatcgcattt caggcaagtg caactgaaaa
    20761 attcaaggtc attacaacat ttaccatcat cgcggatatg gccaaaaacg tggctggaga
    20821 tgctgcagaa gtctcatcca taaccaagcc tggtgcagaa attcatgagt atcagcctac
    20881 ccctggcgat attaaacgtg cgcagggggc acaactgatt ctcgccaatg gtatgaatct
    20941 ggaattgtgg ttccaacgct tttaccagca tctcaatggg gttccagaag taattgtctc
    21001 ttcgggtgtg acgccagtag ggatcaccga aggaccctat gagggcaaac ctaatcccca
    21061 tgcatggatg tcgccagata atgctctgat ttacgtcgat aatattcgtg atgcgttgat
    21121 aaaatacgat ccggcaaatg cacaaaccta ccaacgtaat gccgatactt ataaagccaa
    21181 gattacccaa acccttgccc ccctgcgtaa gcagattacg gaactccctg agaatcagcg
    21241 atggatggtc accagtgaag gggctttttc ttatctcgca cgcgatttgg ggctaaaaga
    21301 gctttatctg tggccgatta atgccgatca acaaggaaca ccgcagcagg tacgtaaggt
    21361 tgttgatata gttaagaaaa atcatatccc ggcagtcttt agcgagagta cgatttccga
    21421 taaaccagcg cgtcaggttg cgcgtgaaac cggcgcacac tacggcggtg tgctctatgt
    21481 cgattccctg agcacagaaa acggcccggt acctacgtat atcgaccttc ttaaggttac
    21541 taccagtacg ctggtacagg gaattaaagc cgggaaaagg gagaaataat gatgcaatct
    21601 gcaggcattg tcgttaatga tgttactgtc acctggcgta acgggcacac agcactgcgc
    21661 gatgcatcct tcacagtacc aagtggatct attgccgctc tggttggggt aaacggttcc
    21721 ggaaaatcga cgttgtttaa agcgattatg ggatttgtgc gtctgaccag cggaaagata
    21781 tctgttctgg gtattcccac gcgacaggcg ctacagaaaa acctggttgc ctacgtccct
    21841 cagtcagaag aggttgactg gtcatttcct gtactggtgg aagatgtggt gatgatgggc
    21901 cgctatgggc atatgggtat gttgcgtata gccaaaaaga gggatcgtca gattgtcacc
    21961 gatgcgctgg aacgtgtcga tatggtggat tttcgccatc gtcaaatcgg cgagctttcc
    22021 ggtggacaaa agaaacgcgt ctttctggcg agagcgattg cacagcaggg tgatgtgatc
    22081 ctgctggatg aaccttttac cggcgttgat gtgaaaaccg aagcgaaaat catcagcctg
    22141 ttgagggagt tacgcgcgga aggcaaaacg atgcttgtct caacgcacaa tctcggctca
    22201 gtcacgacat tttgcgatta tacggtcatg gtcaaaggca ccgtcctggc aagcgggccg
    22261 acagacacca cttttacagc cgagaacctg gagctggctt ttagcggcgt actgcgccat
    22321 gtcacactta acggctcgga agaaagcatt attactgacg atgaacgccc ttttgtggca
    22381 catcgaccgt cagcggtgca gagggaagca agatgaacgt gctactggaa cccttcagct
    22441 atgaatatat gctcaatgcg atgtgggtct cggcaatggt cggcggtctc tgcgctttcc
    22501 tatcatgcta tctgatgcta aaaggctggt cgctgattgg cgatgcgctg tcgcactcta
    22561 ttgtcccggg tgttgcgggg gcatatatgc tggggcttcc gttttctctg ggagccttct
    22621 tttccggcgg actggcagcg ggcagcatgc tgtttcttaa ccaacgcacc cgcttaaaag
    22681 aagatgccat catcggcctg atcttctcgt ccttttttgg cctggggctg tttatggtgt
    22741 cattgaaccc gacatccgtg aacattcaga ccatcgtcct gggcaatatt ctggcaatcg
    22801 atccggcgga tatcctgcaa ctcactatca ttggcattct ctcgatcatc gtgctttttt
    22861 tcaaatggaa agatcttatg gtgacctttt tcgacgagaa tcacgcccgt gctattggat
    22921 tacatccggg cagattaaaa atcctcttct tcaccctgct gtcggtttcg accgttgcgg
    22981 cactgcaaac ggttggtgcc tttctggtga tctgtctggt ggtgactccc ggtgcaacag
    23041 catggttgtt aaccgatcgt tttccccgcc tgctcataat tgctgtaact attggcagtg
    23101 taaccagttt cctcggcgcg tgggtcagtt actttctgga cggcgcgaca ggtggaatca
    23161 tcgtggtggc gcagacactg ctgtttcttt tagcatttgt atttgcgccc acccatggac
    23221 ttttggcaaa tcgtcggcgt gcgcataaag cgctggagga tcgctcatga tggcattatt
    23281 actggagcca ctgcagttca cctttatgag tcacgcactg ctgatttcac tggtagtttc
    23341 cataccctgt gcgctgctgt cggtctttct ggtcctgaaa ggttgggcac tgatgggtga
    23401 cgcgatgagt catgcggttt ttcctggcat cgtgcttacc tggattctgg ggttacctct
    23461 ggctacaggg gcattcgtcg ccggagtatt ctgcgcggtg gcgacgggat acctgaaaga
    23521 caacagccga atcaagcaag atacagttat ggggattgtt ttttctggca tgtttgccgc
    23581 aggtctgatc ttgtatattg caatcaaacc agacgtacat cttgaccata ttcttttcgg
    23641 cgacatgctc gggataacca tcggcgatat aatccagacg gtgattattg ccgggctggt
    23701 tacacttgtt attagcgtaa aatggcggga ttttttgctg ttcagctttg attatcaaca
    23761 ggcgcaggta agcggtttgc atacgagatg gctgcattat gggctgctgt gcatggtttc
    23821 cctgaccatt gtggcgacgc tgaaagcagt aggtatcatt ctctctattt ctctgctcat
    23881 tgcgcctggc gccattgcag tactcctgac acaacgcttt catattgcgc tcctactggc
    23941 gactggcata tcggtaatag tgtcaatgac tggtgtctgg ctgtcctttt ttatcgacag
    24001 cgcaccagct ccgacgattg tcgtcttatt cgcggtcgtg ttcatcatga cgtttaccgt
    24061 taccagcatc aacgcacgca caaagggaaa cgcccataca caggatctgt tatcacccaa
    24121 ttagcacaac atccgaggac agcatcgtcc gccagcctac agaagtccgg aaagccatgg
    24181 aaggtcgttg ggaggaggta cgaattctat catgcaaaaa atacgtaaaa tcgataacgc
    24241 ctagaaatca ttcaatactc gcactatcga aagtttacca gccaaccgcg gcacgttcct
    24301 gcatacgacg tgccgcagct tctgttattc cacgataaaa ttcctaaccg aattcaaatc
    24361 cttcagacta ttcagctctt ccttcagctc ccgctgacgg cgataaatct cgtcattgcg
    24421 ctcaacctgt gcctgagcca ttgctgccgc cagttcttcc agttccggca tcgacagttt
    24481 cacctgctga ttatcggcat caccccacgt catcacgtcc cgtacaatgt cggatttcgc
    24541 agccattacc accggataaa ggcggcccag tgagttgggg ccagcattcc agatacgacc
    24601 gttccattca aacgtgaacg gcttcgcctc ctgttctgtg cgccatgctt caattccctg
    24661 acgtctggcc tctctggccg cttccagcat ttctggtgtc acagtgaatg gggctatctc
    24721 accccatttg ccgctttgca gttcctgcca gatttgctga cccgtcg
//
LOCUS       DAJVTL010000059        23348 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.059, whole genome shotgun sequence.
ACCESSION   DAJVTL010000059 DAJVTL010000000
VERSION     DAJVTL010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23348
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.059"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..108
                     /locus_tag="OQQ26_002270"
     CDS             <1..108
                     /locus_tag="OQQ26_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial family protein"
                     /protein_id="HCS1857709.1"
                     /translation="PSVTAPFRAELSANPAETVVEGPFSKDVILKITYN"
     gene            complement(151..351)
                     /gene="glgS"
                     /locus_tag="OQQ26_002271"
     CDS             complement(151..351)
                     /gene="glgS"
                     /locus_tag="OQQ26_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface composition regulator GlgS"
                     /protein_id="HCS1857710.1"
                     /translation="MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTW
                     FCARYAWYCQQMMQARELELEH"
     gene            620..1249
                     /locus_tag="OQQ26_002272"
     CDS             620..1249
                     /locus_tag="OQQ26_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001047862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1449 family protein"
                     /protein_id="HCS1857711.1"
                     /translation="MNLFADHNTPYLFAISFVLLIGLLEIFALICGHMLSGTLDAHLD
                     HYDSITTGHISQALHYLNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLF
                     VVPVSLLFTIITVHYTGKIVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGK
                     LTDQFGQIHYLLLEPEEGKIFTKGDKVLIICRLSATRYLAENNPWPQIF"
     gene            1276..2937
                     /locus_tag="OQQ26_002273"
     CDS             1276..2937
                     /locus_tag="OQQ26_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HCS1857712.1"
                     /translation="MDDIVNSVPSWMFTAIIAVCVLLIIGIIFARLYRRASAEQAFVR
                     TGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFF
                     VRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENF
                     VQGIQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRR
                     ERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAVFEA
                     ERRREAEQTRILAERQIQETEIDREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKS
                     IAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETK
                     AVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLK
                     FKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGSAAGDANTGNVGGGNLAEQAL
                     SAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVAENVE"
     gene            3176..3235
                     /locus_tag="OQQ26_002274"
     CDS             3176..3235
                     /locus_tag="OQQ26_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCS1857713.1"
                     /translation="MMKLVIILIVLLLVSFAAY"
     gene            3552..3611
                     /gene="ibsE"
                     /locus_tag="OQQ26_002275"
     CDS             3552..3611
                     /gene="ibsE"
                     /locus_tag="OQQ26_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsE"
                     /protein_id="HCS1857714.1"
                     /translation="MMKFVIILVVLLLLSFPTY"
     gene            complement(3731..5164)
                     /gene="hldE"
                     /locus_tag="OQQ26_002276"
     CDS             complement(3731..5164)
                     /gene="hldE"
                     /locus_tag="OQQ26_002276"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HCS1857715.1"
                     /translation="MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
                     TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARVLSKSLADVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV
                     QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
                     LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENVVRGRADTGFGVMTEEELKLAVAA
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
                     LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
                     GEVLVLNFEDGCSTTNIIKKIQQDKKG"
     gene            complement(5212..8052)
                     /gene="glnE"
                     /locus_tag="OQQ26_002277"
     CDS             complement(5212..8052)
                     /gene="glnE"
                     /locus_tag="OQQ26_002277"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HCS1857716.1"
                     /translation="MKPLSSPLQQYWQTVVERLPEPLAEESLSAQAKSVLTFSDFVQD
                     SVIAHPEWLTELESQPPQADEWQHYAAWLQEALCNVNDEAGLMRELRLFRRRIMVRIA
                     WAQTLALVTKESILQQLSYLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGCTQGGCRELDNAQFFTRMGQRLIKVLDQPTQDGF
                     VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLSAIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
                     QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
                     QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLISDFRKELDKRTIGPRGRQVLDHLM
                     PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA
                     SQLARYPLLLDELLDPNTLYQPTATDAYCDELRQYLLRVPEDDEEQQLEALRQFKQAQ
                     LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWGQIVARYGKPNHLNEREGRG
                     FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFS
                     TRTSSGILYEVDARLRPSGAAGMLVTSTEAFADYQKNEAWTWEHQALVRARVVYGDPQ
                     LTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHRDRFDIKADEGGITDIE
                     FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
                     ALQELPGHVSEDCFTAERDLVRASWQKWLVEE"
     gene            complement(8075..9376)
                     /gene="ygiF"
                     /locus_tag="OQQ26_002278"
     CDS             complement(8075..9376)
                     /gene="ygiF"
                     /locus_tag="OQQ26_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HCS1857717.1"
                     /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
                     DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQFPSEV
                     WPNGELPADLASRVQPLFSTDFYREKWLVAVDGSRIEIALDQGEVKAGEFAEPICELE
                     LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
                     ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHALMLFGGIVPRKA
                     STHLRYLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKI
                     SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLMRDIDSILLLAGYYDPVVAQ
                     AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
     gene            9618..10238
                     /locus_tag="OQQ26_002279"
     CDS             9618..10238
                     /locus_tag="OQQ26_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HCS1857718.1"
                     /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY
                     RLVGTVNTGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV
                     KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV
                     QLDDKQRPIIMQWFMYGGGVLGLGLLLGLVLPHLIPTRKRKDRWMN"
     gene            10302..11540
                     /gene="cca"
                     /locus_tag="OQQ26_002280"
     CDS             10302..11540
                     /gene="cca"
                     /locus_tag="OQQ26_002280"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused tRNA nucleotidyltransferase/2',3'-cyclic
                     phosphodiesterase/2' nucleotidase/phosphatase Cca"
                     /protein_id="HCS1857719.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD
                     NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAYLGFRIADETLTLM
                     REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCDALRVLFPEIDALFGVPA
                     PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
                     GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR
                     VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL
                     TRRRIAAVASWKEQRCPKPD"
     gene            complement(11703..12524)
                     /gene="bacA"
                     /locus_tag="OQQ26_002281"
     CDS             complement(11703..12524)
                     /gene="bacA"
                     /locus_tag="OQQ26_002281"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HCS1857720.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
                     VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
                     LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
     gene            complement(12615..12983)
                     /gene="folB"
                     /locus_tag="OQQ26_002282"
     CDS             complement(12615..12983)
                     /gene="folB"
                     /locus_tag="OQQ26_002282"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HCS1857721.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
                     DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
                     ARAANVGVIIERGNNLKENN"
     gene            13088..13705
                     /gene="plsY"
                     /locus_tag="OQQ26_002283"
     CDS             13088..13705
                     /gene="plsY"
                     /locus_tag="OQQ26_002283"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HCS1857722.1"
                     /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
                     NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
     gene            complement(13718..14650)
                     /gene="ttdR"
                     /locus_tag="OQQ26_002284"
                     /gene_synonym="dan"
     CDS             complement(13718..14650)
                     /gene="ttdR"
                     /locus_tag="OQQ26_002284"
                     /gene_synonym="dan"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TtdR"
                     /protein_id="HCS1857723.1"
                     /translation="MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQIL
                     ENTLATTLLSRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGC
                     SFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAH
                     LLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVK
                     VSGHLSSNSGEIVLQWALEGKGIMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYR
                     EPLYRSMKLRVCVEFLAAWCQQRLGKPDEGYQVM"
     gene            14857..15768
                     /gene="ttdA"
                     /locus_tag="OQQ26_002285"
     CDS             14857..15768
                     /gene="ttdA"
                     /locus_tag="OQQ26_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HCS1857724.1"
                     /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE
                     TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE
                     EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIVPDGDDAEIEVYMAGGGCTLPG
                     RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI
                     GSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG
                     CWAHRRGTLLVHADLTFENLSHTRSAL"
     gene            15765..16370
                     /gene="ttdB"
                     /locus_tag="OQQ26_002286"
     CDS             15765..16370
                     /gene="ttdB"
                     /locus_tag="OQQ26_002286"
                     /EC_number="4.2.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
                     /protein_id="HCS1857725.1"
                     /translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK
                     RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGK
                     GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEF
                     GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK"
     gene            16419..17882
                     /gene="ttdT"
                     /locus_tag="OQQ26_002287"
     CDS             16419..17882
                     /gene="ttdT"
                     /locus_tag="OQQ26_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tartrate/succinate antiporter"
                     /protein_id="HCS1857726.1"
                     /translation="MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVI
                     VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSV
                     IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
                     RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
                     IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWMAYVLYPPVLKSGDQVPRWAETEL
                     QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVTLMLLLRIISWDDIVSN
                     KAAWNVFFWLASLIPLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVTLIVVFYLLRY
                     FFASATAYTSALAPMMIAAALPMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
                     SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
     gene            complement(17925..18938)
                     /gene="tsaD"
                     /locus_tag="OQQ26_002288"
     CDS             complement(17925..18938)
                     /gene="tsaD"
                     /locus_tag="OQQ26_002288"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HCS1857727.1"
                     /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
                     NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
                     AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
                     ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
                     AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
                     PAA"
     gene            19176..19391
                     /gene="rpsU"
                     /locus_tag="OQQ26_002289"
     CDS             19176..19391
                     /gene="rpsU"
                     /locus_tag="OQQ26_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HCS1857728.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            19502..21247
                     /gene="dnaG"
                     /locus_tag="OQQ26_002290"
     CDS             19502..21247
                     /gene="dnaG"
                     /locus_tag="OQQ26_002290"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HCS1857729.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
                     SGPSQIERHQRQTLYQLMDGLNTFYQQSLKQPVATSARQYLEKRGLSHEVIARFAIGF
                     APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
                     GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
                     GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
                     LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
                     TLTLPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
                     MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLPQPGLTTGQLLEHYR
                     GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
                     ERLELWTLNQELAKK"
     gene            21442..23283
                     /gene="rpoD"
                     /locus_tag="OQQ26_002291"
     CDS             21442..23283
                     /gene="rpoD"
                     /locus_tag="OQQ26_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HCS1857730.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
                     REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
                     LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR
                     EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
                     MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
                     EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
                     KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
                     RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
                     TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
                     MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
BASE COUNT         5697 a         6363 c         5923 g         5365 t
ORIGIN      
        1 ccttcggtca ccgcaccatt cagggcagaa cttagtgcga acccggcaga gactgttgtt
       61 gagggaccgt ttagtaaaga cgtaatcctc aaaatcacct ataactagca tctaatacaa
      121 acactaaaac gggccatcag gcccgttata tcagtgctct aactccagct ctcttgcctg
      181 catcatctgt tggcaatacc aggcataacg tgcgcaaaac caggttctat gttcttcatc
      241 catgttacca gtaacggcca gaatatcgac cgggcgacct tctgcgtgca ttctggcaaa
      301 actacgcgcc aggaaatcga aattatttaa agaattaaga ctatgatcca taagcacatc
      361 ctccggttat cgcatacctt ttaaggccat atgctttttc tgatttcagt attccccaat
      421 cagtgtagtg cctttaaaca taacgtgcgt aaatatattg tccccgatca cactttttag
      481 tgaaaaataa aaaaccatat taaaatactt tctcttccag aacttctcta acatgtgtta
      541 ttattaacaa atacaaatgt aagcagggaa actattacaa ggtaaatatt gcgtcactaa
      601 atggacattg gagtgacata tgaatttatt cgccgaccat aacacccctt atcttttcgc
      661 tatttccttt gtactgttga tcggtctttt agaaattttt gcgcttatct gtggccacat
      721 gctctccggt actcttgatg cacatcttga ccattatgat tccataacca caggtcatat
      781 tagccaggca cttcattatc tcaatatcgg aagattgcca gctctcgtcg ttctctgctt
      841 actcgctggt ttttttggtc ttattggcat cctgttgcaa catgcctgca tcatggtctg
      901 gcaatcacca ctgtcgaacc tgttcgtggt tcctgtcagt ttactgttta cgattattac
      961 ggtgcattat accggtaaaa tagttgcgcc ctggattcca cgcgaccata gttcagctat
     1021 tacagaagaa gaatatattg gtagcatggc gttaattacc ggtcatcaag ccacttcagg
     1081 taatccctgc gaaggaaaac tcaccgatca atttggtcaa atacattatt tactactgga
     1141 gcctgaagaa ggaaaaattt tcactaaagg agacaaagtg ttaattattt gccgactttc
     1201 tgcaacacga tatttggcgg aaaacaatcc ctggccccaa atattttaat ttattaatta
     1261 aaaggaaatt gaataatgga tgatattgtt aattctgtgc cctcctggat gtttactgca
     1321 attattgccg tatgcgttct gttgattatt ggcattattt tcgccaggct ctatcgtcgc
     1381 gcttcggcag agcaagcttt tgttcgtact ggtttaggtg ggcaaaaagt ggtaatgagc
     1441 ggtggcgcaa tcgtgatgcc gatctttcat gaaataatcc ccatcaatat gaatactctg
     1501 aagctggaag tcagccgctc aaccattgat agcctgatta cgaaagatcg tatgcgcgtc
     1561 gatgtagtag tcgctttctt tgtgcgggta aaaccttcag tagaagggat tgccaccgct
     1621 gcccagacgc tggggcaacg caccctatcg cctgaagact tacgtatgtt ggttgaagat
     1681 aaatttgtcg atgccctccg tgcaacagct gcgcaaatga ccatgcatga gttacaggat
     1741 acccgcgaga actttgtgca gggaatacaa aataccgtag ctgaagatct gtcgaaaaac
     1801 ggcctggaac tggaaagcgt ttcacttacc aactttaacc agacctcgaa agaacatttc
     1861 aatccgaaca atgcctttga cgccgaaggt ttaaccaaac tgactcagga gacggagcgc
     1921 cgtcgtcgcg aacgtaacga agttgaacag gatgtagaag ttgcggtgcg tgagaaaaac
     1981 cgtgatgcgc tgtcgcgcaa gttggagatt gaacaacaag aagcgtttat gacgcttgag
     2041 caggagcagc aggttaaaac ccgtaccgct gagcagaatg cgaaaattgc ggtttttgaa
     2101 gctgaacgtc gccgcgaagc agagcagacg cgaattctgg ctgaacgaca gattcaggag
     2161 acagaaatcg accgcgaaca ggccgtccgc tcaagaaaag ttgaagctga acgtgaagtt
     2221 cgcattaaag agatcgaaca gcagcaggtc accgaaatcg ctaaccagac gaaatcgatc
     2281 gctattgccg ccaaatcgga acaacagtcc caggcagaag cgcgtgctaa tctcgcactt
     2341 gcagaagcgg taagcgccca acaaaacgta gaaaccactc gccagactgc cgaagccgat
     2401 cgtgctaaac aagttgccct aatcgctgcc gcgcaggatg cagaaaccaa agcggttgaa
     2461 ctgaccgtgc gggcgaaagc agaaaaagaa gccgcagaga tgcaggcggc ggctatcgtt
     2521 gagttagccg aagctacacg taaaaagggt ctggcggaag cagaagcaca acgtgcgctg
     2581 aacgatgcta tcaacgtact ttctgatgaa caaaccagcc ttaaattcaa actggccttg
     2641 ttgcaggcgc tacctgcggt aatagaaaaa tccgttgagc cgatgaaatc tattgacggt
     2701 atcaagatta ttcaggtcga tggtctgaat cgtggcagcg ctgcgggtga tgcaaacacg
     2761 ggtaatgtag ggggcggaaa cctggcggaa caagcattat cagccgctct ctcttaccgc
     2821 acacaggcac cgctgattga ctccttgctc aatgaaattg gcgtttcagg cggctcactg
     2881 gcggcattga cttcaccctt aacctcaaca actcccgtcg ccgaaaacgt agaataaatt
     2941 ttcagctatg aacgtccctg gcacaaaaag ccggggattt tttatatctg cgttccgcta
     3001 aaaactgcaa atgatcaggt cgttgcaacg ttttgcgtga ccgctcgggg aaggcaaaac
     3061 tgcctctggg aaagcgttgc gcgaggtccg gcgctcatca acaatcgggg agtcagcaaa
     3121 gggctgaaac gggaaagccc ctcccgagga aggggcctta cagaaggaaa gggttatgat
     3181 gaagctcgtc atcatactga ttgtgttgtt actcgtaagt ttcgcagctt attaacagcc
     3241 aatcagaggg gggagaaatc ctccctcacc cttgttcctt tactttaggt tgaaaaaaaa
     3301 tcagcgtcaa gaaggtttca ttaacacata tccctggcac aaaaagccgg ggatttttta
     3361 tatctgcgtt ccgctaaaag gtgcaaatgc tcaggacgtt gcagcgtttt gcgtgaccgc
     3421 tcggggaagg caaaactgct tcagggaaag cgttgcgcgg ggtccggcgc tcatcaacaa
     3481 tcggggagtc agcaaggggc tgaaacggga aagcccctcc cgaggaaggg gccttataga
     3541 aggaaagggt tatgatgaag ttcgtcatca tactggttgt gttgttactg ttaagtttcc
     3601 cgacttacta acaactgatc agagggggga gaaatcctcc cttacccttg ttcctttact
     3661 ctaggttgaa aaaacaacag cgtcaatagg cctgcctgct acgaagcgag atatgtgaac
     3721 cgctttccgg ttagcctttt ttatcctgtt ggatcttctt gatgatgtta gtggtcgagc
     3781 aaccgtcttc gaagttgagc accagcactt cgccgccgtt ggcccagact tctttactcc
     3841 cggcgatctc ttctggttta tagtcgccgc ctttcaccag cagatctggc aggatcccgg
     3901 cgatcaggcg ctgcggcgtg tcttcttcaa acgacaccac ccagtcgacc gcttccagtg
     3961 cgcccagcac aatcatacgc tgctcgagtg ggtttaccgg gcgggaatcc cctttcagcc
     4021 gtttggtgga ggcatcgctg ttgacggcaa caatcaagcg gtcacccagc ttgcgggcat
     4081 ttgccagata agagacgtgc ccggcatgta ggatatcgaa gacaccgttg gtcattacca
     4141 ctttttcacc acgtttacgc gctgccgcta cggccagctt cagttcctct tcggtcatca
     4201 cgccaaagcc ggtatctgcg cgcccacgca ctacattttc cagctcgatc ggcgaaaccg
     4261 tggaggttcc cagtttgccg accaccacgc cagccgccgc attggcaaag aagcaggctt
     4321 cttccagcga attacccgct gccagcgttg ccgccaggac gccaatcacc gtgtcgcccg
     4381 caccggtaac gtcatacact tcctgcgcct gggttggcat atgcagcggc gctttacccg
     4441 gttgcagcag cgacataccc tgttcggaac gggtcactaa cagagccgag agttcgtaat
     4501 cggcaatcag tttcatgccg cgctcaacaa tctcttcttc ggtcttacat ttaccgacaa
     4561 cagcttcaaa ttccgagaga ttcggtgtca gcagcgtagc gccgcggtag cgctcaaaat
     4621 cggtaccttt tggatcaatc agcaccggaa cgcccgcttt acgcgccagt tggatcatct
     4681 gctgtacgct tgccagcgca cctttggcgt agtcagaaag caccagcgcg ccaatcgaac
     4741 tcagcgcctg attaatccgc tcgtgcagcg gctgcggatc aacaccttcg aaaccttctt
     4801 caaaatccag acggatcagc tgttggttgc gggaaagtac ccgtaatttg gtgatggtcg
     4861 gatgcgtcgg tacagaaacg aagtcgcatt tgacgttgac gtcggccaga gatttactca
     4921 gcacgcgcgc tgcatcgtca atgcccgtca acccgaccag gcgtgcatta gcaccgagag
     4981 aagcgatatt catcgccacg ttagccgcgc cgcccggacg ttcttcgatg gtattcactt
     5041 taaccacggg caccggcgct tccggcgaga tacgactggt ggggccgtac cagtaacgat
     5101 ccagcatcac atcaccaacc accatcactc ctgcacgttc aaactctggc agcgttactt
     5161 tcattcctgt ctcctgagag attcaaaatt tgcgcgcgat aataccatac ctcattcttc
     5221 caccagccac ttctgccagc ttgcccgcac cagatcacgc tctgcggtga agcaatcctc
     5281 cgacacatgg cccggcaatt cctgtaatgc cagatgatga agttcatcgc gaagcgtagt
     5341 gtaagcacgg gtcagtgcca tcgcttcctg ctcttccata atgtcgtttt gcgccagtag
     5401 ttccagaata cgcacgttgt ctgaccagcg cgttaacttc ggtttttcat gagcgtagcg
     5461 caacaccaga tattgggtaa taaattcgat atcggtaatt ccgccttcat cagctttgat
     5521 atcaaagcga tcgcgatgtt tattgccgag atgagcgcgc attttctcgc gcatttcccg
     5581 cacttccgtt tgcagagttt taccttcacg cggcagcgtc ataatctcgc gacgtactgc
     5641 gtcaaagtgc gcggtgagct gcggatcgcc gtacactaca cgcgcacgca ccagcgcctg
     5701 atgctcccac gtccaggcct cgtttttctg ataatcggca aatgcttctg tggaggtaac
     5761 cagcattccc gccgccccgg acgggcgcag ccgcgcatcc acttcgtaca aaatgccgga
     5821 agaggttcgc gtgctgaaca ggtgcataat gcgttgcgcc agacgcagat aaaactgtcg
     5881 accgtcgatt tcccgctcgc cgtcagtcat cgcatccatt gggcaatcat ggaggaagat
     5941 caggtcaaga tcggaactgt agcctaactc ccagccgccc agcttgccgt agccgaccac
     6001 cgcaaaaccg cgcccttcac gttcgttgag gtgatttggc ttaccgtagc gggccactat
     6061 ttgaccccac gcctgctgaa cgacggcatc tatcatagct tctgccagcc aagttaagtg
     6121 atcgctcact ttcattaccg gtagcgtacc ggcgatatcc gctgccgcaa tgcgtaacag
     6181 ctgcgcctgt ttgaactgac gcagcgcctc aagctgttgt tcttcgtcat cttccggcac
     6241 gcgcagcaaa tactggcgca gttcatcaca gtaggcatcg gtcgccgtcg gctggtaaag
     6301 ggtatttgga tcgagcaatt catccagcaa taatggataa cgcgctagct ggctggcaat
     6361 catcggcgat gcggcacaca gagaaatcaa atgtttaagc gccgcaggga attcactgag
     6421 caattctaaa taggtggtgc gggtaacaat ccccaccagc aaggcggtaa tgcgcgacag
     6481 cgtgacagca gcgtcttcac gcgcacagac atcacttagc agatgcggca tcagatggtc
     6541 gagcacctga cgtcctcgcg gcccgatggt gcgcttatcc agctctttgc ggaaatcgga
     6601 aatcagcgtt agcacctgtt tgcgatcatc ctcgctaaga tgcgccagca ctggcgtagt
     6661 gtcatcttcc tgcaacgcat cctgccacag ctcacgccac tgttccgaca gcgactcttc
     6721 ctgagtttca ctttcgtcgt cgccaatcaa ttcattaaac acccggcgca cattggtcat
     6781 atgtgcggtc agcgccccgg tcagttgcgg ccagtcagca aagtccatcg cccacgccag
     6841 ccgcgcacga ttaagctcat cagaaggaag cgtctgggtt tgttcgtcgt taatgctttg
     6901 cagcaggttt tccagacgcc gcaggaacag atacgccact cgcaattgtt cagcatcgtt
     6961 ttcagaaagc agatgcagcg cggcaatggc gctgagcgtt ggcagtaaag agcgcgattg
     7021 cagcgacggt tcgcgcccgc cgcgaatgag ctggaatacc tggacgataa attcaatttc
     7081 gcgaatgcca cccgcgccaa gtttgatgtt gtcggtcaaa ccgcgtcgac gcacttcacg
     7141 ggcaatcatt cctttcatgt tgcgcagcga ctggatcacg ctgaaatcga tgtaacgacg
     7201 gaaaacaaac gggcgcagca tcgcacgcaa ctcgttagca tagacgcctt cgctatcgcc
     7261 cataatccgc gccttgacca tcgcgtaacg ctcccagtcg cgcccctgct cctggtaata
     7321 atcttccaac gcggcaaagc tcagcaccag cgggccactt tcgccaaacg gacgcagccg
     7381 catatccacg cgatagacga agccatcctg cgttggttga tccagcactt taatcagccg
     7441 ctgccccatg cgggtaaaaa actgggcgtt atccagttcc cggcatccac cctgcgtaca
     7501 accatgttcc ggccaggcaa aaatcagatc gatatcagag gagaaattca gttccccgcc
     7561 gcccagctta cccatgccta aaatcagcag cggttgcgct tcgccctgcg cattgcacgg
     7621 cgttccccac tcgcggcagc aggcgtcata caaccagtca cgcgccgcaa caatcagcgt
     7681 ctccgccaga tagctgagct gctgcaatat gctctcttta gtaaccagcg ccagcgtttg
     7741 cgcccaggcg atgcgcacca taatgcgccg ccggaatagc cgcagctcgc gcattaaccc
     7801 ggcttcgtca ttcacattac agagcgcctc ctgcaaccat gccgcgtaat gctgccattc
     7861 gtcggcctgc ggcggttggc tttccagttc cgtcagccac tctggatgcg caatcacgct
     7921 gtcctgcaca aaatcactga aagtaagtac tgacttcgcc tgtgcgctaa gtgattcctc
     7981 ggctaaaggc tctggcagcc gctcaacaac ggtctgccag tactgctgta acggtgaaga
     8041 gagcggcttc ataagcgatt ttatccttgc ctgattaacg ttttccgctg tgcaaccaga
     8101 acggttcctg attgtttgcc tcattacgga aatgttcaat ttcaatgcgt tgcccggtcg
     8161 caatagcgtg acgcagcccc tgccagttct ccagccaggc ttgcgcgacg acaggatcat
     8221 agtaacccgc cagcaacagt attgagtcaa tatcacgcat caggcgtggc aactggtcac
     8281 ggtagcgatc gcctaacggc tggcagaaaa cgcttttcag ttcagcggca tggcgggaaa
     8341 gatggatatc ggcaaagcgt ttgaaggagt cgctaatttt gccctgcgct ttggcatcta
     8401 aaaatggctg ccatgctttg cttaccaacc attcggtcaa cgccagcttc gccattgccg
     8461 tttcggtaga gtagaccgcc gtcacggcag aaaccgcaga agcaatggtc gcttcgcatt
     8521 gggtcagcaa ataacgtaag tgagtgctcg ctttacgtgg cacaatgcca ccgaacagca
     8581 tcagtgcatg gcgaacaagg ccaatggctg ccagcacctg ctctttcgcc gcatcgttgc
     8641 cgcgtaccca cagttcttca tgatactgcc attgcgctaa cgccagctcg agcgccgctt
     8701 ccagcccctg ttccacatcg gcttttgccg caacatgcaa aatggtggtc ggtttgattt
     8761 cacgcgccgg attgccctgc gccagatgat agccacgcgc cgctttgctc aggctgccct
     8821 ggcgtaatcc ggtttgcgat accagttggt tcgccagttt cagcaccgcg cgcgtgtcgc
     8881 cgctaagcag ttccagttcc agctcacaga taggttcagc aaattccccc gctttcacct
     8941 ccccctgatc gagagcgatt tcaattcggc tgccatcgac cgccaccagc catttttcgc
     9001 gataaaaatc ggtgctgaac agcggttgta cgcgggaagc gagatcggca ggcagttcgc
     9061 cgttcggcca gacttccgag ggaaactgcg ccaggtcgag cgtcggttcg ctcaacgcca
     9121 cgttatattc cgggcgctgg tgtaaaccgc ctgtcactct tcctgcaact ttcatggtca
     9181 tctcatagcg accgttttcg ccacgaatac gcaagcccat gtcgtgccca cgcagccagt
     9241 tatccggcgt ttcgtagtaa atattcaaca actgcacggg gtcatggtgc tcgccgccca
     9301 gcgtattgag atggtcacgc aacgcctcaa cggcactgtg attaacaata aactttaatt
     9361 cgatttcctg agccatggcc tttacttatc ggttatgtca cataagtgac gatgaacggc
     9421 gaacttaatg cgatcttttt tgtcagtaga tagtattttg cgccaaattg ccatgcaacg
     9481 ggcaatttga cgggcgtaaa agtttgaagc agtggcaaga cctgacacag aggattccga
     9541 ttgatgtcga atgctttgcg tagcgacact gatgccacta ctatcgttcc actttccatg
     9601 acaataacga cagcctgatg ccaaaattac gcctgatcgg attaacttta ctcgcactta
     9661 gcgcgactgc cgtctcacac gctgaagaaa cgcgctatgt ttctgacgaa ctgaatactt
     9721 gggtccgtag cggtccggga gatcattatc gcctcgtggg cacggttaac accggcgagg
     9781 aagtgacctt attacaaact gacgccaaca ccaattatgc ccaggtgaaa gacagttctg
     9841 gccgtaccgc ctggatcccg ttgaaacaac ttagcacaga gccaagcctg cgctcccgtg
     9901 tgccagatct ggaaaatcag gtcaaaaccc tgaccgataa actcaccaat atcgataaca
     9961 cctggaatca gcgcaccgca gaaatgcagc aaaaagtggc gcagagcgac agcgtgatca
    10021 acggattaaa agaagaaaat cagaaattga aaaacgagct gattgtcgcg cagaaaaagg
    10081 tcgatgccgc cagcgtacag ttggatgaca aacagcgccc catcatcatg caatggttta
    10141 tgtatggcgg tggcgtgctg gggcttggct tgctgctcgg tctggtactg ccacacctga
    10201 tcccaacgcg caaacgcaaa gatcgctgga tgaactaaat cgccttcttc gttgcactgt
    10261 cttattatta ggaattgtgt atttgacgaa gggatgatgg cgtgaagatt tatctggtcg
    10321 gtggtgctgt tcgggatgca ttgttagggc taccggtcaa agacagagat tgggtggtgg
    10381 tcggcagtac gccacaggag atgctcgacg cgggctacca gcaggtaggc cgcgattttc
    10441 ctgtgtttct gcatccgcaa acgcatgaag aatatgcgct ggcacgtacc gaacggaaat
    10501 ccggttccgg ttacaccggt tttacctgct atgccgcacc ggatgtcacg ctggaagatg
    10561 atcttaagcg tcgcgatctg accattaatg cgctggccca ggacgataac ggcgagatta
    10621 tcgacccgta caacggtctg ggcgatctgc aaaatcgtct gttgcgccat gtttcccccg
    10681 cttttggcga agatccgtta cgcgttctgc gcgtggcgcg ttttgctgcg cgttatgcct
    10741 acctcggttt tcgtattgcc gatgaaactc tgacgctgat gcgcgagatg acccatgcgg
    10801 gtgaactgga acacctgacg cctgaacggg tatggaaaga gacggaaagc gccctcacca
    10861 cccgcaatcc acaggtgttc ttccaggtac tgcgcgattg cgacgcactg cgcgttttat
    10921 tcccggaaat tgacgcactg tttggcgttc cggcccctgc caggtggcat ccggaaatcg
    10981 acacgggtat tcatacctta atgacgctct caatggcggc gatgctgagt ccgcaggtcg
    11041 atgtccgttt cgcaacttta tgccacgatc tcggtaaagg actgacgccg ccagaacttt
    11101 ggccgcgtca tcatggtcac ggtccggcgg gtgtgaaatt agtggaacaa ctctgccagc
    11161 gtctgcgcgt gccaaatgaa attcgcgatt tagccagact ggtggctgag tttcacgatc
    11221 tcatccacac cttcccaatg ctgaacccaa aaactatcgt caaattgttt gattccatcg
    11281 acgcctggcg taaaccgcag cgtgtcgagc aactggcgct gaccagcgag gctgacgtac
    11341 gcggcagaac cggttttgaa tcagcggact acccgcaagg ccgttggttg cgcgaagcct
    11401 gggaagtggc gcagtcagtg ccgacaaaag cggtcgttga agcgggattt aaaggtgtgg
    11461 agattcgcga ggagctgacc cgacggcgga ttgcggcggt agccagttgg aaggaacaac
    11521 gttgcccaaa gcctgactga gtataaaact aaacgttaac acgaaccatc ccctcgcccc
    11581 ttcggggaga gggttagggt gaggggaaca gaccagcacc ggtgcgaaca atcaccccca
    11641 ccccggccct ctccctacag agcgagggag aaaacccggc ctgctcccga accttttctc
    11701 aatcaaaaga acacgacata caccgcagcc gccacaataa agcgataaat ggcgaacggg
    11761 ataaacgaaa tgcgcttaat caattgcagg aaggttttaa tcgctatcag cgccaccaca
    11821 aaagcggtga taaacccaac ggcaaacatc gggatatcgc cggttgtcag gaagccccag
    11881 cttttgtaga gatcgagcgc cgttgcgccc atcatcatcg gtaccgccag caggaacgag
    11941 aactcggaag cagcgtaacg gctcacgccc atcagcatcc cacctgaaat ggtggccccg
    12001 gaacgggaga aacccggcca cagcgccaga cactggaaac agccaatcat aaacgcctga
    12061 cgataggtca tatcatcaag acccggcgca cgcggctctt tcggcttcag gcattcggcg
    12121 gcaatcagca acaaaccgcc aacgaccagt gcatacatca catttatcgg gttaaacaat
    12181 gacttaatcg tgtcgtggaa caacagcccc agtaccaccg ccggaatcat ccccagcaaa
    12241 atgtggatca gcgttaaacg acctttgctt tctccttcgt gctgcaacgg gcggccaaag
    12301 tggatgccaa tcaggccaaa cagacgccgc cagaacatca ctactaccgc cagaattgat
    12361 cctaactgga tcacaacttc aaaggttttc gccgtgtcgc cctcgaaccc caacaagtga
    12421 ccgacaataa tcatatggcc cgtgctggat accggcagaa attctgtcaa tccttcgacc
    12481 acacccaata ttgccgctat cagcagcgag tgcatatcgc tcatcaataa acccctaaat
    12541 tattaaaatg taccgcttgt ccggactact gcagtaagac caggttataa ccgtttggtt
    12601 taacagttgt aaaattaatt attttctttc agattattgc cacgctcaat gattacacca
    12661 acattcgccg cccgcgccac tgcgcctggc ttgctgagtt tgatgcgcac ccacggcgag
    12721 ttgaagcgtg ctaacagcag ctccgccacc tcttcagcca cgcgttccac cagcgcaaaa
    12781 cgcgccccct cgacgtggct gaccaccgtt tctgcaatgt cagcgtaact gaggcaatcc
    12841 gccacatcat cacttttcgc cgctttacgg ttatcccatg ccatttcgat atcgaacact
    12901 aacttctgtt cgatggtctg ttcccagtcg taaacaccaa tagtggtgat taccgaaagt
    12961 tgctctataa atacaatatc catcacgtcc tgcctgcttt ttggctaacc ggataccact
    13021 tccggcgaaa tgtgcgtatt atccacagat tcatcgttga acacgaattt tcaaaacgga
    13081 acagcttatg agtgcaatcg cgcctggaat gatcctcatc gcgtacctct gcggctccat
    13141 ttccagtgcc attctggttt gccgcttgtg tgggctgccc gatccgcgaa ccagcggctc
    13201 cggcaatcca ggcgcaacca atgtgttacg tatcggtggc aagggagcag ccgtagcagt
    13261 actgattttc gacgttctga aaggaatgtt gcctgtctgg ggcgcgtatg aattaggtgt
    13321 cagccccttc tggctaggct taattgccat cgccgcctgt cttggacaca tctggcccgt
    13381 tttcttcggt tttaaaggag gaaaaggcgt tgctaccgct tttggagcaa tcgcaccaat
    13441 tggctgggat ctcaccggag taatggcggg aacctggtta ctgaccgtgc tattgagtgg
    13501 atattcgtcg ctgggagcga ttgtcagtgc actgattgct ccgttttatg tctggtggtt
    13561 taagccacaa ttcaccttcc cggtttcgat gctctcttgc ctgatcctgc tgcgtcatca
    13621 tgacaacatc cagcgtctgt ggcgtcgtca ggagacaaaa atctggacga aattcaaaag
    13681 aaagcgcgaa aaggatcccg agtgatttct ggtggatcta catgacctga tagccttcat
    13741 cgggcttgcc cagccgttgc tggcaccatg ccgccagaaa ttccacgcag acacgtaatt
    13801 tcatgctgcg atagagcggc tcccggtaaa cagcccagat attggcgctt tgtgcatact
    13861 ccggcaatac ttgcaccagt ttgccactct ccagaaacgg caacacatcc cactcggaac
    13921 gcagcataat ccctttgccc tccagcgccc attgcagcac aatctcgccg ctattggagg
    13981 aaagatgccc gctaaccttc accgattttt tctcctgacc gttccccaac tcccatattc
    14041 cgtgggtcat atcgcgctct ttggtcacca gacagtcatg acgacttaat tcctgtaatg
    14101 attgtggctg cggatatttt tgcagatact caggtgctgc gcataatatt cttttatttt
    14161 ttgtcaaaag atgcgcaata taataatcag gaatttcgtc attaatacga atatccagat
    14221 caatattatc ctgcactaaa tcaatttgcc gatcgaacaa ttcaaaatgc acctgtaact
    14281 caggataatt gcgcatcagt tcggtaatgg ctggcgcaat atggctgcgc ccaaaaccaa
    14341 aactgcaacc aatacgaatc atcccctccg ggcgcgtttt gatttgcgtg acgtcatcga
    14401 ccagtcgctg atattgggtg aggatttcca acgcatgttc gtaacaacgt tggccacttt
    14461 cagtcagcgc cacgccgcga gcggagcggc tcagcagcgt tgttgccagc gtattttcaa
    14521 ggatttggat tcgcttggtg acaaatgcgg gtgtctgccc aagcgtcgcc gctgcggcgc
    14581 taaaactccc gctgtggacg atttctacca gtacctgcaa gtctttggct aaaggccagc
    14641 tattcagcat cgttaattat ccgcagttgt gataagcgca gtgtatttcg caaaacattg
    14701 ccattccctg ctctggcgca atattcattc ttattttcgc gttgattcac gaactgttaa
    14761 ttacatattc acggtggcaa aaaatataaa accacatttt tagtggtagt ttgtggcggt
    14821 gaatttttcc agacaaatac aaaaactgga gttgccatga tgagcgaaag taataagcaa
    14881 caggcagtga ataagttgac ggagattgtc gctaacttta ccgccatgat ttctacccga
    14941 atgcctgatg acgtggtgga taaactaaaa cagctaaagg atgccgaaac gtcgtcgatg
    15001 gggaaaatta tctaccatac gatgttcgac aacatgcaaa aagcgattga cctgaatcgt
    15061 cctgcctgtc aggacaccgg ggagattatg ttcttcgtta aagtcggttc ccgcttccca
    15121 ctgcttggcg agctgcaaag catactcaaa caagccgtgg aagaggcaac cgtcaaagcg
    15181 ccactgcgtc acaatgcggt agaaattttt gacgaagtga acacaggcaa aaataccggc
    15241 agcggcgtac cgtgggtcac ctgggatatc gtccccgacg gtgacgatgc ggaaatcgaa
    15301 gtttacatgg caggcggcgg ctgcacgcta ccaggccgct cgaaagtgtt aatgccgtca
    15361 gaaggctacg aaggcgtggt gaaattcgtc ttcgaaaata tctccaccct cgccgtaaac
    15421 gcctgtccac cggtactggt gggcgtgggc atcgccacct cggtggaaac cgccgccgta
    15481 ctctcgcgta aagccatttt gcgcccgatt ggcagccgcc atcccaatcc aaaagcggca
    15541 gaactggagc tacgcctgga agaaggactc aaccgtctgg ggattggtcc acaagggctg
    15601 accggcaaca gttcagtgat gggcgtacat atcgaatctg ccgcccgcca tccgtcaacc
    15661 atcggcgttg ctgtctctac cggctgctgg gcgcatcgtc gcggcacgct gctggttcat
    15721 gccgatctca cctttgaaaa tctgtctcac acccggagcg cgttatgaaa aagatcctga
    15781 caaccccgat caaagctgaa gatctgcaag atattcgcgt cggcgatgtg atctacctga
    15841 ccggtacgct ggtgacctgc cgcgacgttt gtcaccgccg cttgatcgaa ctgaaacgtc
    15901 cgatccctta cgatctcaac ggcaaagcga ttttccacgc tggccccatc gtgcgcaaaa
    15961 acggcgacaa atgggagatg gtctccgtcg gtccgacaac cagtatgcgt atggaaagtt
    16021 ttgaacgtga atttatcgag cagaccggcg tgaaactggt ggtcggcaaa ggcggaatgg
    16081 ggccgctgac cgaagaaggc tgtcagaaat tcaaggcgct acatgtaatt ttcccggcag
    16141 gctgcgcggt gctggcggca acccaggtgg aagagattga agaagtgcac tggacagaac
    16201 tcgggatgcc ggagtcgctg tgggtctgcc gggtcaaaga gttcggcccg ctgattgtct
    16261 ctattgacac ccacggcaac aacctgatag ccgaaaacaa aaagctgttc gccgaacgcc
    16321 gcgatcccat cgtggaagag atctgcgagc acgtccatta catcaaataa ccctcccgga
    16381 gaggctcgcc ccctctcctt tttcgcaggc ataacacgat gaaaccttcc actgaatggt
    16441 ggcgatacct tgcgccgctg gcggtcatcg ccattattgc tctaattccg gttcccgcag
    16501 ggctggagag tcatacctgg ctctactttg ccgtttttac tggcgtgatc gttggactga
    16561 tcctcgaacc cgtgccgggt gccgtggtgg cgatggtggg tatatccatc atcgccatac
    16621 tctctccctg gctgctgttc agcccggagc agctcgccca accaggcttt aagttcaccg
    16681 ccaaatccct ctcctgggca gtttctggtt tttctaattc ggttatctgg ctcattttcg
    16741 ccgcctttat gtttggcaca ggctatgaaa aaaccgggct tggacgccgc attgcgctga
    16801 ttctggtgaa aaagatgggg catcgcacgc tgtttctcgg ctatgcggtg atgttctccg
    16861 agctgatcct ggcacctgta acaccgtcca actcggcgcg tggtgcgggg attatctatc
    16921 ccatcatccg taacctgcca ccgctctatc aatcacaacc aaacgacagc agttcacgca
    16981 gcattggctc gtacatcatg tggatgggga ttgttgccga ctgcgtgacc agcgccattt
    17041 tcctgacggc gatggcacca aacttgctgt taattggact gatgaaaagc gcatctcacg
    17101 ccacgctgag ttggggcgac tggttcctcg ggatgttgcc gctcagcatt ttactggttc
    17161 tgctggttcc ctggatggct tacgtgctgt acccgccggt actgaagtct ggtgatcagg
    17221 tgccgcgctg ggcagagacg gaactgcagg caatgggccc gctctgttcg cgtgaaaaac
    17281 ggatgctggg gctgatggta ggcgcgctgg tgctgtggat tttcggcggt gattatatcg
    17341 atgccgcgat ggtcggttac agcgtggtga cgctgatgct gcttttgcgc attatcagtt
    17401 gggacgacat tgtcagtaat aaagcggcat ggaacgtttt cttctggctg gcctcgctta
    17461 tccccctcgc gaccggactc aacaacaccg gttttattag ctggtttggc aaactgttag
    17521 caggcagctt aagtggttat tcgccgacga tggtgatggt gacgttgatt gtggtgtttt
    17581 atctactgcg ctactttttc gccagcgcca cggcgtatac ctccgccctc gcaccgatga
    17641 tgatcgccgc cgcgctgccg atgccggaaa tcccgctgcc ggtgttctgc ctgatggttg
    17701 gcgcggcaat tggtctgggg agcattctta caccatacgc caccggaccc agtccgattt
    17761 actacggtag tggttatctg ccaacggcgg attactggcg actgggggcg atttttgggc
    17821 tgatattcct cgtattgctg gtgattaccg gcttactgtg gatgcccgtg gtgttgcttt
    17881 aagtaagaac ggtgccggaa gtaattctcc ggcacccgat agttttacgc agccggtaac
    17941 tccgccagcg gccagcgcgg acgcacgcta acaccgagat ccgccgtcgc gcctgcttta
    18001 aaccgcacca ttccggcata ggcgatcatc gcgccgttat cagtacaaaa ttccggacgc
    18061 gcgtagaaca cttcgccgcg gcgttttttc atcatttcag ccagcttcgc ccgtaacgtg
    18121 cggttagcac tcacgccgcc ggccattacc agtcgcttaa agcccgtctg atccaacgct
    18181 cgcttacact taatcatcaa cgtatcgacc accgcatctt caaaggcgcg ggcgatatca
    18241 gcacgcgtct ggtcgtcggt gccgttgtca cgaatcgtgt tcgccgcaaa ggttttcaga
    18301 ccagaaaagc tgaaatccag ccccggacgg tcggtcatcg gacgcgggaa aacaaagcgc
    18361 ccggcagtac cctgagccgc cattttcgac agtaacggtc cgccaggata atccagcccc
    18421 agcagcttcg cggttttatc aaacgcttca ccggcggcat catcgataga ctcgccgagc
    18481 agctcgtact ggccaatgcc agtgacgctg attaactgtg tatgaccgcc ggaaaccagc
    18541 agcgcgacaa acggaaattc cggtgggtta tcttccagca tcggcgctaa cagatgccct
    18601 tccatatggt gtaccgggat cgccggaacg ttccaggcaa acgccagaga acgccccacg
    18661 gtcgcgccaa ccagcagtgc gccgactaat ccagggcctg cggtataggc cacagcatca
    18721 atgtcttttg ccgttaaacc agactccttt agcgccgcct ggatcaacgg tacggtttta
    18781 cgcacatgat cgcgggaggc cagttcaggc acgacgccgc cgtagtcagc gtgcaatttc
    18841 acctgactat acaattggtt ggctaacaaa cctttttcat cgtcgtaaat ggcgatgccg
    18901 gtttcatcgc aggaagtttc aatacccagt acacgcatga cttgttttac ctcgctttat
    18961 taccgcgcag tgtaggacca atgcgggttg atgtaaaact ttgttcgccc ctggagaaag
    19021 cctcgtgtat actcctcacc cttataaaag tccctttcaa caaaggccgc ggtgctttac
    19081 aaagcagcag caattgcagt aaaattccgc accattttga aataagctgg cgttgatgcc
    19141 agcggcaaac cgaattaatc aaaggtgaga ggcacatgcc ggtaattaaa gtacgtgaaa
    19201 acgagccgtt cgacgtagct ctgcgtcgct tcaagcgttc ctgcgaaaaa gcaggtgttc
    19261 tggcggaagt tcgtcgtcgt gagttctatg aaaaaccgac taccgaacgt aagcgcgcta
    19321 aagcttctgc agtgaaacgt cacgcgaaga aactggctcg cgaaaacgca cgccgcactc
    19381 gtctgtacta attccccgag agcgttgctc tccgatcaga ccgagttgta gttgtaaggc
    19441 cgtgcttccg aaaggaatgc gcggcttatt ttcgtttatg aattgctaaa aatcggggcc
    19501 tatggctgga cgaatcccac gcgtattcat taatgatctg ctggcacgca ctgacatcgt
    19561 cgatctgatc gatgcccgtg tgaagctgaa aaagcagggc aagaatttcc acgcgtgttg
    19621 tccattccac aacgagaaaa ccccgtcatt caccgttaac ggtgagaaac agttttacca
    19681 ctgctttgga tgtggcgcgc acggcaacgc gatcgacttc ctgatgaact acgacaagct
    19741 tgagttcgtc gaaacggtcg aagagctggc ggcaatgcac aatcttgaag tgccatttga
    19801 agcaggcagc ggccccagcc agatcgagcg ccatcagcgg caaacgcttt atcagttgat
    19861 ggacggtctg aatacgtttt accaacaatc tttaaagcaa cctgttgcca cgtctgcgcg
    19921 ccagtatctg gaaaaacgcg gattaagcca cgaggttatc gcccgctttg cgattggttt
    19981 tgcgcccccc ggttgggaca acgtcctgaa gcggtttggc ggcaatccag aaaatcgcca
    20041 gtcattgatt gatgcgggga tgttggtcac taacgatcag ggacgcagtt acgatcgttt
    20101 ccgcgagcgg gtgatgttcc ccattcgcga taaacgcggt cgggtgattg gttttggcgg
    20161 gcgtgtgctg ggcaacgata cccccaaata cctgaactcg ccggaaacag acattttcca
    20221 taaaggccgc cagctttacg gtctttatga agcgcagcag gataacgctg aacccaatcg
    20281 tctgcttgtg gtcgaaggct atatggacgt ggtggcgctg gcgcaatacg gtattaatta
    20341 cgccgttgcg tcgttaggta cgtcaaccac cgccgaccac atacaactat tgttccgcgc
    20401 gaccaacaat gtcatttgct gttatgacgg cgaccgtgca ggccgcgatg ccgcatggcg
    20461 agcgctggaa acggcgctgc cttacatgac agacggccgt cagctacgct ttatgttttt
    20521 gcctgatggc gaagaccctg acacgctggt acgaaaagaa ggtaaagaag cgtttgaagc
    20581 gcggatggag caggcgatgc cgctctccgc atttctgttt aacagcctga tgccgcaagt
    20641 tgatctgagt acccctgacg ggcgcgcacg tttgagtacg ctgacactgc cattgatatc
    20701 gcaagtgccg ggcgaaacgc tgcgaatata tcttcgtcag gaattaggca acaaattagg
    20761 catacttgat gacagccagc ttgaacgatt aatgccaaaa gcggcagaga gcggcgtttc
    20821 tcgccctgtt ccgcagctaa aacgcacgac catgcgtata cttatagggt tgctggtgca
    20881 aaatccagaa ttagcgacgc tggtcccgcc gcttgagaat ctggatgaaa ataagctccc
    20941 tggacttggc ctattcagag aactggtcaa cacttgtctc ccccagccag gtctgaccac
    21001 cgggcaactt ttagagcact atcgtggtac aaataatgct gccacccttg aaaaactgtc
    21061 gatgtgggac gatatagcag ataagaatat tgctgagcaa accttcaccg actcactcaa
    21121 ccatatgttt gattcgctgc ttgaactgcg ccaggaagag ttaatcgctc gtgagcgcac
    21181 gcatggttta agcaacgaag aacgcctgga gctctggaca ttaaaccagg agctggcgaa
    21241 aaagtgattt aacggcttaa gtgccgaaga gcgatcggga agcccccgac agccgcactg
    21301 agaggcagcg gcaaatatat aagtacgccc tcgtaattat cgttggcggt aaacaaccgt
    21361 tggatttcag cgttaacggc tgaaggacat cgggtcaatc gcccaacacc aacctcatga
    21421 aataagtgtg gataccgtct tatggagcaa aacccgcagt cacagctgaa acttcttgtc
    21481 acccgtggta aggagcaagg ctatctgacc tatgccgagg tcaatgacca tctgccggaa
    21541 gatatcgtcg attcagatca gatcgaagac atcatccaaa tgatcaacga catgggcatt
    21601 caggtgatgg aagaagcacc ggatgccgat gatctgatgc tggctgaaaa caccgcggac
    21661 gaagatgctg ccgaagccgc cgcgcaggtg ctttccagcg tggaatctga aatcgggcgc
    21721 acgactgacc cggtacgcat gtacatgcgt gaaatgggca ccgttgaact gttgacccgc
    21781 gaaggcgaaa ttgacatcgc taagcgtatt gaagacggga tcaaccaggt tcaatgctcc
    21841 gttgctgaat atccggaagc gatcacctat ctgctggaac agtacgatcg tgttgaagca
    21901 gaagaagcgc gtctgtccga tctgatcacc ggctttgttg acccgaacgc agaagaagat
    21961 ctggcaccta ccgccactca cgtcggttct gagctttccc aggaagatct ggacgatgac
    22021 gaagatgaag acgaagaaga tggcgatgac gacagcgccg atgatgacaa cagcatcgac
    22081 ccggaactgg ctcgcgaaaa atttgcggaa ctacgcgctc agtacgttgt aacgcgtgac
    22141 accatcaaag cgaaaggtcg cagtcacgct gccgctcagg aagagatcct gaaactgtct
    22201 gaagtattca aacagttccg cctggtgccg aagcagtttg actacctggt caacagcatg
    22261 cgcgtcatga tggaccgcgt tcgtacgcaa gaacgtctga tcatgaagct ctgcgttgag
    22321 cagtgcaaaa tgccgaagaa aaacttcatt accctgttta ccggcaacga aaccagcgat
    22381 acctggttca acgcggcaat tgcgatgaac aagccgtggt cggaaaaact gcacgatgtc
    22441 tctgaagaag tgcatcgcgc cctgcagaaa ctgcagcaga ttgaagaaga aaccggcctg
    22501 accatcgagc aggttaaaga tatcaaccgt cgtatgtcca tcggtgaagc gaaagcccgc
    22561 cgtgcgaaga aagagatggt tgaagcgaac ttacgtctgg ttatttctat cgccaagaaa
    22621 tacaccaacc gtggcttgca gttccttgac ctgattcagg aaggcaacat cggtctgatg
    22681 aaagcggttg ataaattcga ataccgccgt ggttacaagt tctccaccta cgcaacctgg
    22741 tggatccgtc aggcgatcac ccgttctatc gcggatcagg cgcgcaccat ccgtattccg
    22801 gtgcatatga ttgagactat caacaaactc aaccgtattt ctcgccagat gctgcaagag
    22861 atgggccgtg aaccgacgcc ggaagaactg gctgaacgta tgctgatgcc ggaagacaag
    22921 atccgcaaag tgctaaagat cgccaaagag ccaatctcca tggaaacgcc gatcggtgat
    22981 gatgaagatt cgcatctggg ggatttcatc gaggatacca ccctcgagct gccgctggat
    23041 tctgcgacca ccgaaagcct gcgtgcggca acgcacgacg tgctggctgg cctgaccgcg
    23101 cgtgaagcga aagttctgcg tatgcgtttc ggtatcgata tgaacaccga ccacacgctg
    23161 gaagaagtgg gtaaacagtt cgacgttacc cgcgaacgta tccgtcagat cgaagcgaag
    23221 gcgctgcgca aactgcgtca cccgagccgt tctgaagtgt tgcgtagctt cctggacgat
    23281 taatcggtag gccggatcag gcgttacgcc gcacccggca ctaggccctc tgcacaaacg
    23341 ccaccttt
//
LOCUS       DAJVTL010000060        23220 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.060, whole genome shotgun sequence.
ACCESSION   DAJVTL010000060 DAJVTL010000000
VERSION     DAJVTL010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23220
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.060"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            46..1236
                     /gene="malE"
                     /locus_tag="OQQ26_002292"
     CDS             46..1236
                     /gene="malE"
                     /locus_tag="OQQ26_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000695396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HCS1857731.1"
                     /translation="MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYN
                     GLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLL
                     AEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPA
                     LDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGL
                     TFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTF
                     KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYE
                     EELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINASSGRQTVDEALKDAQT
                     RITK"
     gene            1482..3026
                     /gene="malF"
                     /locus_tag="OQQ26_002293"
     CDS             1482..3026
                     /gene="malF"
                     /locus_tag="OQQ26_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HCS1857732.1"
                     /translation="MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAI
                     TTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTF
                     ERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLK
                     ETTAQPEGERANLRVITQNRQALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGT
                     LTNNQSGVKYRPNNQIGFYQSITANGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKP
                     FLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISIL
                     IFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCIGLL
                     KAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNG
                     GPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKA
                     TRMKFD"
     gene            3041..3931
                     /gene="malG"
                     /locus_tag="OQQ26_002294"
                     /pseudo
     CDS             3041..3931
                     /gene="malG"
                     /locus_tag="OQQ26_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252048.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
     gene            4303..5778
                     /gene="xylE"
                     /locus_tag="OQQ26_002295"
                     /pseudo
     CDS             4303..5778
                     /gene="xylE"
                     /locus_tag="OQQ26_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313041.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose transporter XylE"
     gene            complement(5822..6232)
                     /gene="psiE"
                     /locus_tag="OQQ26_002296"
     CDS             complement(5822..6232)
                     /gene="psiE"
                     /locus_tag="OQQ26_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HCS1857733.1"
                     /translation="MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLAD
                     VLFAPEQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLII
                     VDHKSPLDVLIYSAAILLLVITLWLCNSKRLKRE"
     gene            6445..6723
                     /locus_tag="OQQ26_002297"
     CDS             6445..6723
                     /locus_tag="OQQ26_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857734.1"
                     /translation="MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSN
                     VSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH"
     gene            complement(6770..8866)
                     /locus_tag="OQQ26_002298"
     CDS             complement(6770..8866)
                     /locus_tag="OQQ26_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HCS1857735.1"
                     /translation="MKKRHLLSLLALGISTVCYGETYPAPIGPSQSDFGGVGLLQTPT
                     ARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTY
                     KDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
                     LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFN
                     DLRPSYIDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGE
                     QVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEP
                     LGHETTLAQKRVEPEVPASTEQGWYIDKSRFNLHLDPVLNQSIGGPENFYIYQLGVMG
                     TADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLNSNWALGLDANYVKQRDWRSA
                     KDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTSLTRDGGQQLGR
                     KFQLYDMTSDRSVNFR"
     gene            complement(8866..9603)
                     /locus_tag="OQQ26_002299"
     CDS             complement(8866..9603)
                     /locus_tag="OQQ26_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HCS1857736.1"
                     /translation="MIKQTFVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLI
                     DLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQ
                     QIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQP
                     FTPGRDVASYLSGQNLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVG
                     LADSVWSETPDALNADILQTLTQRIPQ"
     gene            complement(9600..10238)
                     /locus_tag="OQQ26_002300"
     CDS             complement(9600..10238)
                     /locus_tag="OQQ26_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HCS1857737.1"
                     /translation="MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDI
                     QNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLI
                     EVNNLAADPLIKPAQIIDGATWMRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDET
                     PVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ"
     gene            complement(10352..10594)
                     /locus_tag="OQQ26_002301"
     CDS             complement(10352..10594)
                     /locus_tag="OQQ26_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857738.1"
                     /translation="MKKVLYGILAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSA
                     TSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
     gene            complement(10949..12598)
                     /gene="pgi"
                     /locus_tag="OQQ26_002302"
     CDS             complement(10949..12598)
                     /gene="pgi"
                     /locus_tag="OQQ26_002302"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HCS1857739.1"
                     /translation="MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSAT
                     FDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALR
                     NRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDL
                     GPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPADKNLPVLLALIGIWYTNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELKDDKEISSHDSSTNGLINRYKAWRG"
     gene            13123..14472
                     /gene="lysC"
                     /locus_tag="OQQ26_002303"
     CDS             13123..14472
                     /gene="lysC"
                     /locus_tag="OQQ26_002303"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HCS1857740.1"
                     /translation="MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAA
                     ALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVA
                     ALAELAALQLLPRLNEGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVD
                     IWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE"
     gene            14725..14997
                     /locus_tag="OQQ26_002304"
     CDS             14725..14997
                     /locus_tag="OQQ26_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
                     /protein_id="HCS1857741.1"
                     /translation="MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKK
                     EYINKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR"
     gene            complement(15130..16002)
                     /gene="rluF"
                     /locus_tag="OQQ26_002305"
     CDS             complement(15130..16002)
                     /gene="rluF"
                     /locus_tag="OQQ26_002305"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HCS1857742.1"
                     /translation="MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGD
                     QVKPGDIVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIENSSSEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASN
                     GKRFTSPGRKKKGR"
     gene            16350..17297
                     /locus_tag="OQQ26_002306"
     CDS             16350..17297
                     /locus_tag="OQQ26_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HCS1857743.1"
                     /translation="MENSDDICLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKR
                     GHDQGIVTIAINYDYNENLWLEQQLKQKFGLKDVVVVSGNDEDEETQLAMMGLHGAQL
                     LDRLLEPGDIVGFSWGRAVSALVENLPQAGQSRQLICVPIIGGPSGKLESRYHVNTLT
                     YSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISAYWDNLDVALVGIGSPAIR
                     DGANWHAFYGGEESDDLNARQVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQAR
                     YSIGIAMSEKKYSGIVGALRGKYINCLVTNSCTAELLLK"
     gene            17367..18173
                     /locus_tag="OQQ26_002307"
     CDS             17367..18173
                     /locus_tag="OQQ26_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1857744.1"
                     /translation="MQTWLNLQDKIIIVTGGASGIGLAIVEELLAQGANVQMVDIHGG
                     DGQYEGHKGYQFWPTDISSAKEVNHTVAEIIQRFGRIDGLVNNAGVNFPRLLVDEKAP
                     AGQYELNEAACEKMVNINQKGVFLMSQAVARQMVKQHDGVIVNVSSESGLEGSEGQSC
                     YAATKAALNSFTRSWSKELGKHGIRVVGIAPGILEKTGLRTPEYEEALAWTRNITVEQ
                     LREGYTKNAIPIGRAGRLAEVADFVCYLLSERASYITGVTTNIAGGKTRG"
     gene            18183..18590
                     /locus_tag="OQQ26_002308"
     CDS             18183..18590
                     /locus_tag="OQQ26_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sorbose transporter subunit IIA"
                     /protein_id="HCS1857745.1"
                     /translation="MVNAIFCAHGKLACAMLESVQMVYGNANVEAVEFVPGENAGDIV
                     VKLEKLVSIHNQDEWLIAVDLQCGSPWNAAAMLAMRNPRLRVISGLSLPLALELVDNQ
                     DSMNVDELCEHLTQIAKQTCVVWKQLATAEEDF"
     gene            18590..19084
                     /locus_tag="OQQ26_002309"
     CDS             18590..19084
                     /locus_tag="OQQ26_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HCS1857746.1"
                     /translation="MNITLARIDDRLIHGQVTTVWSKVANTQRIIICNDEVYNDEVRR
                     TLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIGTL
                     NIGGMAWRPGKKQLTKAVSLDDDDINAFHELNNLGVIMDLRVVASDPSINIIDKINEQ
                     LIAN"
     gene            19150..19947
                     /locus_tag="OQQ26_002310"
     CDS             19150..19947
                     /locus_tag="OQQ26_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HCS1857747.1"
                     /translation="MEISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILG
                     DLKTGIILGGTLGLIALGWMNVGAAQSPDSALASIISAILVIVGQQSIATGIAIALPV
                     AAAGQVLTVFARTITVVFQHAADKAAEEARFRTLDILHVSALGVQALRVAIPALIVSL
                     FVSADMVSNMLNAIPEFVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGG
                     YFDLSLLAFGGVGVIMALVYIQLNPQWRKAEPQLQAPASTALDQLDD"
     gene            19958..20782
                     /locus_tag="OQQ26_002311"
     CDS             19958..20782
                     /locus_tag="OQQ26_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HCS1857748.1"
                     /translation="MEQRKITRSDLVSMFLRSNLQQASFNFERIHGLGFCYDMIPAIK
                     RLYPLKEDQVAALRRHLVFFNTTPAVCGPVIGVTAAMEEARANGAEIDDGTINGIKVG
                     LMGPLAGVGDPLVWGTLRPITAALGASLALSGNILGPLLFFFIFNAVRLAMKWYGLQL
                     GFRKGVNIVSDMGGNVLQKLTEGASILGLFVMGVLVTKWTSINVPLVVSQTHAADGST
                     VTMTVQNILDQLCPGLLALGLTLLMVRLLNKKINPVWLIFALFGLGIIGNALGFLS"
     gene            20834..22063
                     /gene="sorE"
                     /locus_tag="OQQ26_002312"
     CDS             20834..22063
                     /gene="sorE"
                     /locus_tag="OQQ26_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-sorbose 1-phosphate reductase"
                     /protein_id="HCS1857749.1"
                     /translation="MKTTALRLYGKRDLRLETFDLPEMQEDEILATVVTDSLCLSSWK
                     EANLGENHKKVPDDVATNPIIIGHEFCGDILAVGKKWQHKFQPGQRYVIQANLQLPDR
                     PDCPGYSFPWVGGEATHVVIPNEVMEQDCLLAYDGETYFEGSLVEPLSCVIGAFNANY
                     HLQEGSYNHTMGIRPQGRTLILGGTGPMGLLAIDYALHGPVNPSLLVITDTDNDKLSY
                     ARKHYPSEPQTLIHYLNATDAAFDTLMALSGGHGFDDIFVFVPNEGLVTLASSLLATD
                     GCLNFFAGPQDKHFSEPINFYDVHYAFTHYVGTSGGNTDDMRAAVKLIEEKKVQAAKV
                     VTHILGLNAAGETTLELPAVGGGKKLVYTGKYLPLTSLTQIQDQALAAILARHQGIWS
                     GEAEQYLLAHAEAISHD"
     gene            22445..23134
                     /gene="pepE"
                     /locus_tag="OQQ26_002313"
     CDS             22445..23134
                     /gene="pepE"
                     /locus_tag="OQQ26_002313"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HCS1857750.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQ
                     TWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGL
                     LAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTN
                     ALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGE
                     EAVPLEAGHRF"
BASE COUNT         5521 a         5918 c         6012 g         5769 t
ORIGIN      
        1 gtttaggtgt tttcacgagc acttcaccaa caaggaccat agattatgaa aataaaaaca
       61 ggtgcacgca tcctcgcatt atccgcatta acgacgatga tgttttccgc ctcggctctc
      121 gccaaaatcg aagaaggtaa actggtaatc tggattaacg gcgataaagg ctataacggt
      181 ctcgctgaag tcggtaagaa attcgagaaa gataccggaa ttaaagtcac cgttgagcat
      241 ccggataaac tggaagagaa attccctcag gttgcggcaa ctggcgatgg ccctgacatt
      301 atcttctggg cgcacgaccg ctttggtggc tacgctcaat ctggcctgtt ggctgaaatc
      361 accccggaca aagcgttcca ggacaagctg tatccgttta catgggatgc cgtacgttac
      421 aacggcaagc tgattgctta cccgatcgct gttgaagcgt tatcgctgat ttataacaaa
      481 gatctgctgc cgaacccgcc aaaaacctgg gaagagatcc cggcgctgga taaagaactg
      541 aaagcgaaag gtaagagcgc gctgatgttc aacctgcaag aaccgtactt cacctggccg
      601 ctgattgctg ctgacggggg gtatgcgttc aagtatgaaa acggcaagta cgacattaaa
      661 gacgtgggcg tggataacgc tggcgcgaaa gcgggtctga ccttcctggt tgacctgatt
      721 aaaaacaaac acatgaatgc agacaccgat tactccatcg cagaagctgc ctttaataaa
      781 ggcgaaacag cgatgaccat caacggcccg tgggcatggt ccaacatcga caccagcaaa
      841 gtgaattatg gtgtaacggt actgccgacc ttcaagggtc aaccatctaa accgttcgtt
      901 ggcgtgctga gcgccggtat taacgccgct agtccgaaca aagagctggc gaaagagttc
      961 ctcgaaaact atctgctgac tgacgaaggt ctggaagcgg ttaataaaga caaaccgctg
     1021 ggtgccgtag cgctgaagtc ttacgaagaa gagttggcga aagatccacg tattgccgcc
     1081 accatggaaa acgcccagaa aggtgaaatc atgccgaaca tcccgcagat gtccgctttc
     1141 tggtatgccg tgcgtactgc ggtgatcaac gcctccagtg gtcgtcagac tgtcgatgaa
     1201 gccctgaaag acgcgcagac tcgtatcacc aagtaatgct gtgaaatgcc ggatgcggcg
     1261 tgaacgcctt gtccggccta cgaaattgaa acgtatgtag gcctgataag acgcatcagt
     1321 gtcgcatcag gcagttgttg tcggataagg cgtgaaagcc ttgtccggcc tacgaaattg
     1381 aaacgtatgt aggcctgata agacgcgtca gcgtcgcatc aggcagttgt tgtcggataa
     1441 ggcgtgaaag ccttatccgt cctggaatga ggaagaaccc catagatgtc attaaaaaga
     1501 aacattggtg gcaaagcgac gcgctgaaat ggtcagtgct aggtctgctc ggcctgctgg
     1561 tgggttacct tgttgtttta atgtacgcac aaggggaata cctgttcgcc attaccacgc
     1621 tgatattgag ttcagcgggg ctgtatattt tcgccaatcg taaagcctac gcctggcgct
     1681 atgtttaccc gggaatggct ggaatgggat tattcgtcct cttccctctg gtctgcacca
     1741 tcgccattgc cttcaccaac tacagcagca ctaaccagct gacttttgaa cgtgcacagg
     1801 aagtgttgtt agatcgctcc tggcaagcag gcaaaaccta taactttggt ctttacccgg
     1861 cgggcgatga gtggcaactg gcgctcagcg acggcgaaac cggcaaaaat tacctttccg
     1921 acgcttttaa atttggcggc gagcaaaaac tgcaactgaa agaaacgacc gcccagcccg
     1981 aaggcgaacg cgcgaatctg cgcgtgatta cccagaatcg tcaggcgctg agtgacatta
     2041 ccgccattct gccggatggc aacaaagtga tgatgagctc cctgcgccag ttttctggca
     2101 cgcagccgct ctacacactc gacggtgacg gcacgttgac gaataatcag agcggcgtga
     2161 aatatcgtcc gaataaccaa attggctttt accagtccat taccgccaac ggcaactggg
     2221 gtgatgaaaa gctaagcccc ggttacaccg tgaccaccgg ctggaaaaac tttacccgcg
     2281 tctttaccga cgaaggcatt cagaaaccgt tcctcgccat tttcgtctgg accgtggtgt
     2341 tctcgctgat cactgtcttt ttaacggtgg cggtcggcat ggttctggca tgtctggtgc
     2401 agtgggaagc gttgcgcggc aaagcggtct atcgcgtcct gctgattctg ccctacgcgg
     2461 tgccatcgtt catttcaatc ttgattttca aagggttgtt taaccagagc ttcggtgaga
     2521 tcaacatgat gttgagcgcg ctgtttggcg tgaagcccgc ctggttcagc gatccgacca
     2581 ccgcccgaac gatgctgatt atcgtcaata cctggctggg ctatccgtac atgatgatcc
     2641 tctgcatagg cttgctgaaa gcgattccgg acgatttgta tgaagcctca gcaatggatg
     2701 gcgcaggtcc gttccagaac ttctttaaga ttacgctgcc gctgctgatt aaaccgctga
     2761 cgccgctgat gatcgccagc ttcgccttta actttaacaa cttcgtgctg attcaactgt
     2821 taaccaacgg cggcccggat cgtcttggca ccaccacgcc agccggttat accgacctgc
     2881 ttgttaacta cacctaccgc atcgcttttg aaggcggcgg gggtcaggac ttcggtctgg
     2941 cggcagcaat tgccacgctg atcttcctgc tggtgggtgc gctggcgata gtgaacctga
     3001 aagccacgcg aatgaagttt gattaaggga gataacaaaa atggcaatgg tccaaccgaa
     3061 atagcaaaaa gcacgtttgt ttattactca cctgctactg ctacttttta tcgcggcgat
     3121 tatgttcccg ctgctgatgg tcgtcgctat ctcactgcgc caggggaact ttgcgaccgg
     3181 cagcctgatc ccggagcaaa tctcctggga tcactggaaa ctggcgttag gttttagcgt
     3241 tgaacaggct gacggtcgca ttacgccacc gccattcccg gtacaactgt ggctgtggaa
     3301 ctcggtaaag gtcgccggga tttccgcgat tggcattgtg gcgctctcca ccacctgcgc
     3361 ctacgctttc gcccgtatgc gctttccagg caaagcgacg ctgctgaaag gaatgctgat
     3421 tttccagatg ttcccggcag tactttcact ggtcgcgttg tatgcgttgt ttgatcgtct
     3481 gggtgagtac attccattca ttggcctgaa tactcacggc ggcgtaattt tcgcgtatct
     3541 gggtgggatt gcgctgcatg tctggaccat caaaggctat ttcgaaacca tcgatagttc
     3601 gctggaagaa gcggctgcgc tggatggtgc gacaccgtgg caggccttcc gccttgtcct
     3661 gttgccgctg tcagtaccga ttctggcggt ggtattcatc ctgtcgttta tcgctgccat
     3721 tactgaagtt ccggtcgcgt cgctgttact gcgtgacgta aacagctaca ccctggccgt
     3781 ggggatgcag caatacctca acccgcaaaa ctacctgtgg ggtgactttg ccgccgctgc
     3841 cgtgatgtct gcattaccga tcaccatcgt cttcttgctg gctcaacgct ggctggtcaa
     3901 cggcctgacg gcaggtggtg tgaaaggtta aagatgttgt tctgccaatg ttatgccgct
     3961 gcaccctcaa cttacgttat cccaacttgt gactgttatt cggcgctcca cggagcgcct
     4021 ttttttcttt cgtctgcaat ctgaatcgtt cgccggttaa tatttccatc atagagctta
     4081 ttatttttgc gttatttgtt ttcccactta cgataattct ctttcgtgct ctgagtcacg
     4141 gcaatagtat tgtttttatc aattttggat aattatcaca attaagatca cagaaaagac
     4201 attacgtaaa cgcattgtaa aaaatgataa ttgccttaac tgcctgacaa ttccaacatc
     4261 aatgcactga taaaagatca gaatggtcta aggcaggtct gaatgaatac ccagtataat
     4321 tccagttata tattttcgat taccttagtc gctacattag gtggtttatt atttggctac
     4381 gacaccgccg ttatttccgg tactgttgag tcactcaata ccgtctttgt tgctccacaa
     4441 aacttaagtg aatccgctgc caactccctg ttagggtttt gcgtagccag cgctctgatt
     4501 gggtgcatca tcggtggtgc cctcggtggt tattgcagta gccgcttcgg tcgtcatgat
     4561 tcacttaaga ttgctgctgt cctgtttttt atttctggtg taggttctgc ctggccagaa
     4621 cttggtttta cctctataaa cccggacaac acagtgcctg tttatctggc aggttatgtc
     4681 ccggaatttg ttatttatcg cattattggc ggtattggcg ttggtttagc ctcaatgctt
     4741 tcaccaatgt atattgcgga actggctcca gctcatattc gcgggaaact ggtttcattt
     4801 aaccagtttg cgattatttt tgggcaactt ttagtttact gcgtaaacta ttttattgcc
     4861 cgttccggtg atgccagctg gctgaatact gacggctggc gttatatgtt tgcctcggaa
     4921 tgtatccctg cactgctgtt cttaatgctg ctgtataccg tgccagaaag tcctcgctgg
     4981 ctgatgtcac gcggcaagca agaacaggcg gaaggtatcc tgcgcaaaat tatgggcaac
     5041 acgcttgcaa ctcaggcagt acaggaaatt aaacactctc tggatcatgg ccgcaaaacc
     5101 ggtggtcgtc tgctgatgtt tggcgtgggc gtgattgtca tcggcgttat gctctccatc
     5161 ttccagcaat ttgtcggcat caatgtggtg ttgtactacg cgccggaagt gttcaaaacg
     5221 ctgggggcca gcacggatat cgcgctgttg cagaccatta ttgtcggagt tatcaacctc
     5281 accttcaccg ttctggcaat tatgacggtg gataaatttg gtcgtaagcc actgcaaatt
     5341 atcggcgcgc tcggaatggc aatcggtatg tttagcctcg gtaccgcgtt ttacactcag
     5401 gcaccgggta ttgtggcgct actgttgatg ctgttctatg ttgccgcctt tgccatgtcc
     5461 tggggtccgg tatgctgggt actgctgtcg gaaatcttcc cgaatgctat tcgtggtaaa
     5521 gcgctggcaa tcgcggtggc ggcccagtgg ctggcgaact acttcgtctc ctggaccttc
     5581 ccgatgatgg acaaaaactc ctagctggtg gcccatttcc acaacggttt ctcctactgg
     5641 atttacgggt gtatgggcgt tctggcagca ctatttatgt ggaaatttgt cccggaaacc
     5701 aaaggtaaaa cccttgagga gctggaagcc ctctgggaac cggaaacgaa gaaaacacaa
     5761 caaactgcta cgctgtaatc ttcctgtcca gcacgccgcg ccagttcggc gtgctgtctt
     5821 tttactcccg cttcagccgt ttcgaattac acagccacag agtgatcacc agtaacagga
     5881 tcgcagccga gtagatcaac acatccagtg gcgatttatg atcgacgatg atcaagcgca
     5941 caatggcggt gatcccaata tagacaaagt aacgtagcgg gaagtgaaaa ccggactgaa
     6001 agtacttcac aatcagcgcg ataaattcga aatagagaaa gtaaaccacc agtccttcta
     6061 ccagctcata tttgctggtt tgttctggcg cgaacagcac atctgccaga tgcaccgttt
     6121 ctttgccgag gaagacaacc aaaatcaggc cgaggcacag caggccaaga ttgagtacgg
     6181 tctgcaaaat ggtggagata aactccacgc gcggacgaga gagtgacgtc atagcagtac
     6241 ctccttcaca gtggcgagct tcctgtataa cgcaaaaatg tgacggagat ctatattttt
     6301 tgtgtatgtt ttgttcagct caattcagtg ggcatctccc atcaacgtcg catcaggcaa
     6361 aacacacagc caaaaaatca cccattcagg tgattcccag ccaccagcaa tgcgcgaaaa
     6421 atcgacaatg ttcctctgga acaaatgaaa cgtaacctga taaaggtggt aaaaatgaag
     6481 ccttattttg ctgctttgat gttatcagtc tctgttcttc ctgcttatgc tggtccgctc
     6541 ggtactgctg ataaagccga cctaccgcaa agcaatgtct ccagcccaat gatggcccag
     6601 tcgctcaggc aaccagacct gcaaccgata tcgacggaca ggaagacaga atgttttcgc
     6661 ctttacacac cagatcgcaa accgggggtg aactgcgttc ctgatggctc aacaggccat
     6721 taagaatgag ggtgccagtg attgcgaaaa ctggcacctt tcccattact tagcggaaat
     6781 tgacgctacg gtcgctggtc atgtcataca actggaactt acgcccaagt tgctgacccc
     6841 catcacgcgt cagcgacgtc cagccaattg ccgcacggct acgtgtcggg ccagacgaga
     6901 agagatccaa cggtaccgag acatacacgc ctttggtgaa gtccccttcg ccgtactcct
     6961 ctttcgaaac gttggtgatc gtggcatagc cgcccaccac cacgccgctg tcaaagcgtt
     7021 tagcgatctc cagcgtgccg cctttatccc ctgccagata ctgcccgacg ctggctttaa
     7081 ctaacacatc ctgagcgaaa gatggcgtcc agtaggcggt cagatgtccg gttttcacac
     7141 tgtagtcggt gaatttcatc atatcttttg cactacgcca gtcgcgctgt ttaacgtagt
     7201 tggcatccag acctaacgcc cagttactgt tcagcggacg atacaacact tcggcccccg
     7261 caccgccaaa catggtttcg agataacctc catagacctg accgtagaag ccgttgccca
     7321 gatgctggaa gtagttggct tgcaggttat tcacatagac atcgttctgc acatactcgc
     7381 gcacatgggt acgaacgcgc ggtaagtgcg agtcctgcgg tggattggtg tagttaaact
     7441 tgtcgtagtt gttggcaaga tttgcaaaca ggctgccggt ggtcagtaga tggtccgtca
     7501 gccacaaatc tgccgttccc atcacgccca gctgatatat gtaaaagttt tccgggccac
     7561 cgatggactg gttcagcacc ggatcaagat gcagattaaa acgtgatttg tcgatatacc
     7621 aaccctgctc cgtggacgcc ggaacctccg gctcaacgcg tttttgcgcc agcgtcgttt
     7681 cgtggcccaa cggctctccg gcgagatgat ttttcaggct ggcgacatcg gtttccgtcg
     7741 tcacctgcgg catgttaagg cgattttccg taatgcggat cgttttgatc ccatccggca
     7801 gatcattcat cacgatccga ttagcacgga tgatcccttc gcgcgaatca cgatatttca
     7861 cctgttcgcc ggtaacatac agcgtatcgc ctttcgcctg gatctgcgga tcggcaagtc
     7921 cggcattgta tttcagcaac gttaactgat tcgccaccac cgagtgctgc aaaatggcat
     7981 cctgcggctg cggttgatat tgcgggcggg cgttatcgat gtaggacggg cgcagatcgt
     8041 taaagttggt gcgcagcgtg acgccaaaca taaaggtgtt gccacgttca tagctaaggt
     8101 taacgtcggc ccaatcggta acgcgataaa tcgccccgac gttaaactta cttttttgct
     8161 ccagcttccc ggcaaaatcc tgctgataat tattaccttc atactccagt ttcaggcgca
     8221 gcggttgcca gggcgtctgg tattccacgc cgccaaacag tgaggccggg ccgtggaaca
     8281 tctgactgcc gtcgatagac cccgcttgtt tgtagctgtt atcgcgatag caatatttat
     8341 cactggctga acagagcgga tttttcacat taccgctggt gcccagatat ccccagccca
     8401 ggccgagcgt aaaatcgaac ggcccccagg ctttgctggc aacaagatat tccgcatcaa
     8461 acagccccgt accgccgata tccctcgcac caaccgccac ttgcggcagc cagtaactct
     8521 cttcccacaa acgcagtttg agatcgaagg ctttatcttt atacgtttga tcgccagaga
     8581 acgcttcgac gctgctgtac tgccgggtgc gcacgtcggt gtagcgcagc gttgtttcca
     8641 gccacgggaa gagttgcact gaagctgagt aataacggta ctgatcgtta tctcgatagt
     8701 tcaggctcaa ctccccttcc cgtgccatac gcgcggtggg cgtttgtaat aatcctacgc
     8761 caccgaaatc cgactgcgac ggaccaatgg gcgcaggata tgtttcgccg tagcaaactg
     8821 tgctaatgcc cagcgccagt aagctaagca gatgtctttt tttcattatt gaggtatccg
     8881 ctgcgtcaga gtctgaagaa tgtcggcgtt aagggcatca ggcgtctcac tccagacgga
     8941 gtctgctagg ccaacataaa taatgctgcc gggcatcggc tctacgtgac gcttgttcca
     9001 gtaagccacc ggcgcttttt gcgtgcgtcc gtccgggtaa accacccacg catagctgcg
     9061 atccgcaccg ctaagcaggt tctggccgga gagatagctc gccacgtcgc gacctggagt
     9121 gaatggctgc ttgccaggac ggctgataag cccgaacagc gtgaccgtgg acggtggcgg
     9181 cccgacccac agcgtgtagt tgccctgcaa cggtgggtta ccgcgttcgg caacgcggac
     9241 gatatcagga tcaagattga ttttttgcct gcccgtcact ttcaacgcct gaatttgctg
     9301 gcgtaaggcg ttaatcgcgg cggcatcgtc ggcgctggaa tctgcgccct gttctgccag
     9361 ccgtgtcagc aacgcctgct gctgacgcaa tgctgccgcc gttgccagct cttcgctaat
     9421 caccgcacca ggccaccaac tgtttgccag ccgcggttgg cctaccagat cgattaaatg
     9481 ctctgcgccc gtcagcgttt tggcctcact gctgccattg ctgaacacct tcacggttcc
     9541 tgccgcgaag accgatgacg ctcccacact caaaagcaac gcgacaaaag tttgtttaat
     9601 cattgttttg ccgccttgat gagagtggtt ttcaccggga aataatccgc gccgagatac
     9661 tgttccgact ggcgaatttg cccttcgctg tcgatccaat agcggttatg ccagcgcgcc
     9721 tggtcggtgg agacttcttc gtccagcacg cgaaccgggg tttcatcgct gccgaccttg
     9781 acggtatcgg tgccatccca tttgaagact gagcgtgcgg tggcgtagcg tacctgctgg
     9841 tactcggtcc agcccatcgt gcgcatccag gttgcgccat caatgatttg tgcgggttta
     9901 atcagcgggt cggcggcaag gttattcact tcaatcaggt tgtcgccgcc aagcaaagtc
     9961 ttcaccagac gaccatgttg tgtgacaaga gtggcctgat cctgagtgac ccatttttgt
    10021 tgtccgtctt cagcgaaggc cagcaccaca aacaattgcg gcccgccatt aagctgcatg
    10081 tactggctgg cgtagggcat attttgaata tcatcgtccg tcagctgtac gcctggtgta
    10141 ccgaacagac tgtcccacag tgaattgccc agctctttag tcgtggctga acaggcctgt
    10201 aatagcaggc agataagaat gagtgcaggt cgcttcacga ctcttctcca gaggggcaga
    10261 ataaccacac cggagtgtgg ttatggttaa tcccttcata tttcaagcca cagatgcaat
    10321 gactcgaatt attttgggga tacatacttt attactgggt actggtggtt gtggttgttg
    10381 tggtcccggt attagaacca tcaccgccac cggttgccgc gagcgcgaca cccaccgccg
    10441 agcttacggt gctgacgctg gtcgcggagg aactccccgc cgaaaccgac gttgctgccg
    10501 accctgccgc ttcgcccacc tgtacaggtg cagcccacgc agaagtcgcc gcaagcgcag
    10561 atatggccaa aatgccatac agaacttttt tcataacaat ttcccttcat tgaatgaatg
    10621 gagatttacc caaaaacatt tcgggcggaa tcgagtatac acaactaaag catgcgaatt
    10681 acggcgcggg gaattagtga tggagtttta ggataattgg aatgaatatc aaatataagt
    10741 ttcagtttat atacaaataa cactaaaaat cataaagtta aaataaaaat aaaagtaatt
    10801 aatctgcgta ttttccgaaa tcaataacga ttaaaaatct attttaggat taacctcacg
    10861 gtatgatttc cgttaaatca cagacaaggg gatttatctg ataaaacaat gccgacttta
    10921 agtcggcatt gttattaagg ttatttaatt aaccgcgcca cgctttatag cggttaatca
    10981 gaccattggt cgagctatcg tggctactga tttctttgtc atctttcagc tctggcagaa
    11041 tacggttcgc cagctgttta cccagctcca cgccccactg gtcgaaggtg aagatgttca
    11101 ggatcacgcc ctgagtaaag attttgtgct catacagcgc aatcaacgcc cccaggctga
    11161 acggagtgat ttcacgcagc aggatggagt tagtcgggcg gttaccttcg aacactttga
    11221 acggcaccac gtagtcaagc gttgctggat ctttaccctg atcgcgatat tcctgttcaa
    11281 ccacttcgcg ggatttacca aacgccagcg cttcggtctg agcaaagaag ttagacagca
    11341 gtttctggtg atgatcagag agcgggttat gggtgatagc cggggcgatg aaatcgcacg
    11401 gtaccatttt ggttccctgg tggatcagct ggtagaacgc gtgctgaccg ttagtgcctg
    11461 gttcacccca gataatcggg ccagtctggt aatccacaac gttaccgtta cggtcaacat
    11521 acttaccgtt ggactccata ttgccctgct ggaagtacgc cgcgaaacgg tgcatatact
    11581 ggtcatacgg cagaatcgct tcagtttccg caccaaagaa attggtgtac cagatgccga
    11641 tcagcgccag cagtacaggc aggtttttat cggcaggcgt ggtggagaaa tgcttgtcca
    11701 tcgcgtgtgc gccagaaagc agttcaacga agttatcaaa gccgatggag agaacaatcg
    11761 acaggccaat cgctgaccac aaagagtaac gaccgccgac ccagtcccag aactcgaaca
    11821 tgttggcggt atcaatacca aactcgccaa cggctttggc attggtggag agcgccgcaa
    11881 agtgtttcgc aacgtgtttt tcatcacctg ccgctttcag gaaccagtca cgcgcgctat
    11941 gggcgttggt catggtttcc tgagtggtga aggttttaga tgctaccagg aacagcgtgg
    12001 tttccgggtt tacttttttc agcacttcag cgatgtgagt cccatcgacg ttagaaacaa
    12061 agtgcatgtt caggtgattt ttgtacggac gcagtgcttc ggtcaccatg tacgggccga
    12121 ggtcagaacc gccgatcccg atgttcacta cgtcagtgat tgctttgccg gtataaccct
    12181 tccactcacc ggagataatc gcttccgaga aggttttcat cttctccagc accgcgttga
    12241 cttctggcat aacatctttg ccatcaacca gaatcggggt attgctacga ttacgcagcg
    12301 ctacgtgcag cacggcgcgg ttttcagtgc ggttgatctt ctcgccagag aacatcgact
    12361 taatcgcgcc cgccagatcg cactctttcg ccagatcttg taatttcgcc agcgtctctt
    12421 cagtgatgcg gtttttggag taatccacca gcatctgatc gtcgaaggtt gcggagaact
    12481 tagaaaaacg atcgccgtct ttagcaaaaa gatcggcgat cgtaacgtct ttcatttcat
    12541 cgaagtgttt ctgtagtgcc tgccaggcag cggtctgcgt tggattgatg tttttcatta
    12601 gcaatactct tctgattttg agaattgtga ctttggaaga ttgtagcgcc agtcacagaa
    12661 aaatgtgatg gttttagtgc cgttagcgta atgttgagtg taaaccctta gcgcagtgaa
    12721 gcatttatta gctgaactac tgaccgccag gagtggatga aaaatccgca tgaccccgtc
    12781 gttgacaacc gccccgctca ccctttattt ataaatgtac tacctgcgct agcgcaggcc
    12841 agaagaggcg cgttgcccaa gtaacggtgt tggaggagcc agtcctgtga taacacctga
    12901 gggggtgcat cgccgaggtg attgaacggc tggccacgtt catcatcggc tacaggggct
    12961 gaatcccctg ggttgtcacc agaagcgttc gcagtcgggc gtttcgcaag tggtggagca
    13021 cttctgggtg aaaatagtag cgaagtatcg ctctgcgccc acccgtcttc cgctcttccc
    13081 ttgtgccaag gctgaaaatg gatcccctga cacgaggtag ttatgtctga aattgttgtc
    13141 tccaaatttg gcggtaccag cgtagctgat tttgacgcca tgaaccgcag cgctgatatt
    13201 gtgctttctg atgccaacgt gcgtttagta gtcctctcgg cttctgctgg tatcactaat
    13261 ctgctggtcg ctttagcgga agggctggaa cctggcgagc gattcgaaaa actcgacgct
    13321 attcgcaata tccagtttgc cattctggaa cgtctgcgtt acccgaacgt tatccgtgaa
    13381 gagattgaac gtctgctgga gaacattact gttctggcag aagcggcggc gctggcaacg
    13441 tctccggcgc tgacagatga actggtcagc cacggcgagc tgatgtcgac cctgctgttt
    13501 gtcgagatcc tgcgcgaacg cgatgttcag gcacagtggt ttgatgtacg taaagtgatg
    13561 cgtaccaacg accgatttgg tcgtgcagag ccagatgtag ccgcgctggc ggaactggcc
    13621 gcgctgcagt tgctcccacg cctcaatgaa ggcttagtga tcacccaggg atttatcggt
    13681 agcgaaaata aaggtcgtac aacgacgctt ggccgtggcg gcagcgatta tacggcagcc
    13741 ttgctggcgg aggctttaca cgcatctcgt gttgatatct ggaccgacgt cccgggcatc
    13801 tacaccaccg atccacgcgt ggtttccgca gcaaaacgca ttgatgaaat cgcgtttgcc
    13861 gaagcggcag agatggcaac ttttggtgca aaagtactgc atccggcaac gttgctaccc
    13921 gcagtacgca gcgatatccc ggtctttgtc ggctccagca aagacccacg cgcaggtggt
    13981 acgctggtgt gcaataaaac tgaaaatccg ccgctgttcc gcgctctggc gcttcgtcgc
    14041 aatcagactc tgctcacttt gcacagcctg aatatgctgc attctcgcgg tttcctcgcg
    14101 gaagttttcg gcatcctcgc gcggcataat atttcggtag acttaatcac cacatcagaa
    14161 gtgagcgtgg cattaaccct tgataccacc ggttcaacct ccactggcga tacgttgctg
    14221 acgcaatctc tgctgatgga gctttccgca ctgtgccggg tggaggtgga agaaggtctg
    14281 gcgctggtcg cgttgattgg caatgacctg tcaaaagcct gcggcgttgg caaagaggta
    14341 ttcggcgtac tggaaccgtt caacattcgc atgatttgtt acggcgcatc cagccataac
    14401 ctgtgcttct tggtgcccgg cgaagatgcc gagcaggtgg tgcagaagct gcatagtaat
    14461 ttgtttgagt aaatactgta tggcctggaa gctatatttc gggccgtatt gattttcttg
    14521 tcactatgct catcaataaa cgagcctgta ctctgttaac caacgtcttt atcggagaat
    14581 aattgccttt aattttttta tctgcatctc taattaatta tcgaaagaga taaatagtta
    14641 agagaaggca aaatgaatat tatcagttct gctcgcaaac gaattcccgt acactgaact
    14701 ctctggctca ctgagggcac catcatggca ctcccccgta ttacccaaaa agagatgact
    14761 gaacgcgagc agcgtgaact taaaacactg ctggatcggg cgcggattgc gcatggtcgc
    14821 gtactgacca actccgaaac caacagcatt aagaaagagt acatcaataa attaatggtc
    14881 gagcgtgagg ctgaagcgaa aaaagcccgc cagttaaaga aaaagcaggc ttataaaccg
    14941 gatcctgaag cgtcatttag ctggtcagca aatacgtcga cgcgcggcag gcgctaatga
    15001 acaatcaacg cctgagattt tcactcgtct gtgtggacac aatcttcccc tcaccctaac
    15061 cctctccccg aaggggcgag gggactgtcc gagcactttt tggacatttt catcagtctg
    15121 aggcgttaat cagcgtccct tcttttttcg ccccggcgag gtaaaacgct taccgttgga
    15181 tgccgggcga ccgccttttt ccgccgtttt ttccatctta acgactggac gtttgatgcc
    15241 cgccgttttc ggtttagcct tcgctttagg ttttgcctcg gaagaggaat tttcgatgag
    15301 cttaaagagg tcgattaact catcgtcggt taaatcacgc cactccccca gcggaatgcc
    15361 gcttaagctg acgttcataa tgcgcgtacg ttccagcttt ttcacttcat agccgaaatg
    15421 ctcgcacatg cgacggatct gacggttcaa cccctgcacc agggtaatgc ggaagacaaa
    15481 cggtgcttct tttttgactt tgcacttttt cgtcaccgtc ccgaggatcg gcactcccgc
    15541 ccccatacca cgaataaatt catcggtaat cggtttatcg accgtcacca gatactcttt
    15601 ctcatgatcg ttacccgcac ggaggatctt attcaccaga tcgccgtgat tggtgaggaa
    15661 aatcagtccc tgggagtctt tatccaggcg gccaatcggg aacacgcgtt tgctgtggtt
    15721 aacgaaatcg acaatgttat cgcgctcacc atcttcggtg gtgctgacaa taccgacggg
    15781 cttgttcagg gcgataagta ccaaatcttc ggcttcccga ggctcaatca actgaccgtt
    15841 tactttcaca atgtcgccgg gtttcacctg atcgccaatg gtggctcgct tgccattaag
    15901 gaacacattg ccttgctcga tatagcgatc cgcttcgcgg cgtgagcaaa ttccgctttc
    15961 gctgatgtat ttatttaaac ggactgatga gtcgggcagc ataaattctc ctgtaaaacg
    16021 cggaatatac cgtacctctt agcggggaaa aacagggtta tgcggcaacg tcgaaattaa
    16081 atgtgatctg ccacgccttt tatcacaaaa gtgtctccgg aagtacgatg caaatttgcc
    16141 tggcaaaata aggataatca acatattacg aatcgctgca cacctgtgct gatgactact
    16201 acgcagagaa acaaatgtgc aagagaaagc gctatttctc cccatgcaaa gagtgaaaaa
    16261 tcgctttgaa aggccctcat gatggggtta tatcagatca agcggtgaga aagcgtattt
    16321 gcacaaatgt gcagaaccag gaggcggcaa tggaaaacag tgacgatatc tgtttgattg
    16381 tgaagattgc ccaactctat tacgaacagg atatgacgca ggcgcaaatc gcgcgcgaac
    16441 tgggtattta ccgcaccacc atcagccgct tgcttaaacg aggccacgat cagggaattg
    16501 tcaccatcgc catcaactat gactacaacg aaaatctctg gctggagcag caactgaagc
    16561 aaaagtttgg cctgaaagac gttgtggtgg tgtcgggaaa tgatgaggat gaagagactc
    16621 aactggcgat gatggggtta cacggcgcgc aactgctgga tcgcttgctg gaacctggcg
    16681 atattgtcgg tttttcctgg ggtcgcgcgg tgagcgcact ggttgaaaac ttgccgcagg
    16741 cggggcaatc gcggcagtta atctgcgtac caattattgg cggaccgtcc ggtaaactcg
    16801 aaagccgcta tcacgtaaac acattaacct acagcgcggc agcgaagctg aaaggggaat
    16861 cgcatctcgc ggattttccg gctctgctgg ataacccatt aattcgtaat gggatcatgc
    16921 agtctcagca ctttaaaacc atctctgcct actgggataa tctggatgtc gccctggtgg
    16981 gaattggctc accggccatt cgcgacggcg ctaactggca tgcgttttat ggtggtgaag
    17041 agagtgacga cctgaatgcc cgccaggttg ctggcgatat ttgctcgcgc ttttttgata
    17101 ttcacggcgc aatggttgaa acgaatatga gcgaaaaaac actctctatc gaaatgaata
    17161 aattaaagca ggcacgatat tccattggca ttgccatgag tgaaaaaaaa tacagcggaa
    17221 ttgttggtgc attgcgtgga aaatatatta attgtctggt aacgaatagc tgcacagctg
    17281 aactattact gaaataaaaa tcttcccgat gtttaccgta ataaaaatta cggcgggtcc
    17341 ctattatcta aaatcaggag tctgttatgc aaacgtggtt aaatttgcag gataaaatca
    17401 ttatcgtcac cggcggcgca tccggtattg gtctggcgat tgtagaggaa ttattagcac
    17461 aaggcgcaaa cgtacagatg gtagatattc acggtggcga tggtcaatat gaaggtcata
    17521 aaggctatca gttttggccg accgatattt ccagcgccaa agaggtaaat catacggtag
    17581 cggaaattat ccagcgtttt ggtcgcatcg acggtctggt caataacgcc ggggtcaatt
    17641 tcccgcgtct gctggtcgat gagaaagcgc ctgccgggca gtatgaactc aacgaagctg
    17701 catgcgaaaa aatggtcaat atcaaccaga aaggcgtttt tctgatgtcg caggcggtgg
    17761 cgcgacagat ggtcaaacaa catgatggcg tgattgtgaa tgtttcctca gaaagtggac
    17821 tggaaggctc agaaggccaa agctgttacg ccgctaccaa agccgcgctt aatagcttca
    17881 cgcgatcctg gtcgaaagaa ttgggtaaac acggtatccg tgtagtcggt atcgcgccgg
    17941 ggattctgga aaaaacagga ctgcgcacgc cggaatatga agaagcgctg gcgtggacac
    18001 gcaatatcac cgtcgagcag ctgcgtgaag gctataccaa aaacgccatt cctattgggc
    18061 gcgccggaag attagcagaa gtcgctgatt ttgtttgtta tctgttgtct gaacgcgcca
    18121 gctatatcac cggagtaacc actaacattg cgggcggcaa aacgcgcggc taaggaggct
    18181 ttatggtcaa cgccattttt tgtgcccacg gcaaattagc ttgcgccatg ctggaatcgg
    18241 ttcagatggt ttacggcaac gccaatgttg aagccgttga atttgtgccc ggtgaaaacg
    18301 ccggagacat tgtggtaaag ctggaaaagt tagtaagcat tcacaatcaa gatgagtggc
    18361 tgattgccgt ggatttacag tgcggcagcc cgtggaatgc ggcagcgatg cttgcgatgc
    18421 gcaatcctcg tctgcgggta atcagcggcc tttccctgcc gctggcgctc gaactggttg
    18481 ataaccagga cagcatgaat gttgatgaac tgtgtgaaca cctgacgcaa atcgcaaagc
    18541 aaacatgcgt tgtctggaaa caactggcaa cggcagagga ggatttctga tgaacattac
    18601 gctcgcccgc attgatgacc gcctgatcca cggtcaggtc acgaccgtct ggtcgaaagt
    18661 ggctaacacc cagcgcatta ttatctgcaa tgacgaagtt tataacgatg aagtgcgccg
    18721 gacattattg cgtcaggctg cgccaccggg aatgaaggtt aacgtggtca atattgaaaa
    18781 agccgtcgcg gtttatcaca acccgcaata tcaggacgaa accgtttttt atcttttcac
    18841 tcgcccacag gatgccttag cgatggttcg ccagggggta aaaataggca ccctgaatat
    18901 tggcggcatg gcctggcggc ccggtaaaaa acagttaacc aaagcggttt cattagatga
    18961 tgatgatatt aacgcatttc atgagttaaa taatcttggc gtcataatgg atttacgcgt
    19021 cgtagcgtca gatccctcaa tcaatattat cgacaaaata aacgaacagt taatcgcaaa
    19081 ttaaataata gcgcctgtgt acatatgctt taacaggcag ggatgacgac acttaaaagg
    19141 tgacaaatca tggaaataag taccctacaa attattgcta tatttctttt ttcctgtatt
    19201 gccggaatgg gcagcgtgct ggatgaattt cagactcatc gcccgttaat tgcctgtacg
    19261 gtgattggtt taattctcgg tgatttaaaa accggaataa tactcggtgg tacgctggga
    19321 ttgatagctc tcggctggat gaacgtcggc gcggcgcaat ctccggattc tgcactcgcc
    19381 agcataatct ccgccattct ggttatcgtt ggtcagcaaa gcatcgccac cggaatcgcc
    19441 atcgcgttgc ctgtggctgc ggcaggccag gtgctgacgg tgtttgcccg taccatcacc
    19501 gtagtgttcc agcacgcggc ggataaagca gcggaagagg cgcggtttcg cactctcgat
    19561 attctgcatg tctccgcgct tggcgtgcag gcgctgcgcg tcgccattcc ggcactgatt
    19621 gtctcactgt tcgtcagcgc cgatatggtc agcaatatgt taaacgccat tcccgaattt
    19681 gtgacccgag gtctgcaaat tgctggcggt tttatcgtgg tggtcggtta cgccatggtg
    19741 ctacgtatga tgggcgtgaa atatttgatg cctttctttt tcctcggttt cctcgcaggt
    19801 ggctacttcg atctcagtct gctggcgttc ggtggcgtcg gcgtgatcat ggccctggtc
    19861 tacatccagc taaatccaca gtggcgtaaa gctgaacctc agctccaggc ccccgcttcc
    19921 accgcccttg accaacttga cgattaacgg agccatcatg gaacagagaa aaattacacg
    19981 cagcgatctg gtgagcatgt ttctgcgctc caacctgcaa caggcgtcct ttaactttga
    20041 acgtattcac gggctgggtt tttgctacga catgatcccc gccatcaagc gactttaccc
    20101 attaaaagag gatcaggttg cggcgctcag gcgacacctg gtgttcttca ataccacgcc
    20161 agccgtatgt ggcccggtca tcggcgtcac tgccgccatg gaagaggcgc gggccaacgg
    20221 cgcggaaatt gatgacggta ccattaacgg catcaaagtc ggtctaatgg gaccattggc
    20281 aggagttggc gatccactgg tctggggaac gctgcgcccg attaccgccg cgctcggcgc
    20341 atctctggca ctttcgggca acattctcgg cccgctgctg ttcttcttta ttttcaacgc
    20401 ggtgcgtctg gcgatgaagt ggtatggcct acagctcggc tttcgcaaag gggtgaatat
    20461 cgtcagcgat atgggcggga atgtgctgca aaaactcacc gaaggcgcgt cgattctcgg
    20521 actgtttgtg atgggcgtgc tggtcaccaa atggacgtca atcaacgtac cgttggtggt
    20581 ttcacaaacg catgccgccg atggctccac cgtcaccatg accgtgcaga acattctcga
    20641 ccaactttgc cctggtttgc tggcgctcgg tctgacgcta ctgatggttc gtctgctcaa
    20701 caaaaaaatt aacccggtat ggctgatttt cgccctgttt ggcttaggga ttatcggcaa
    20761 tgcgctgggc ttcctgtcct gattcttcgc cccggcacga ctgccggggc catcgctcaa
    20821 catgaggtgg tttatgaaaa caacagctct gcgtctttat ggtaaacgtg atttacgcct
    20881 ggaaaccttt gaccttcctg aaatgcagga ggatgaaatc ctcgcgacgg tggtcactga
    20941 cagcctgtgc ctctcttcct ggaaagaggc caacctgggt gaaaaccata aaaaagtacc
    21001 cgacgatgtg gcgaccaacc caatcatcat cggccacgag ttttgcggcg atattctggc
    21061 cgtgggtaaa aagtggcagc acaaattcca gccgggtcag cgttatgtga ttcaggccaa
    21121 cctgcaactc cccgaccgcc cggactgccc cggctactcc ttcccgtggg tgggcggcga
    21181 agccacgcat gtggttattc ccaacgaggt catggaacaa gattgcctgc tggcatacga
    21241 cggcgaaacc tattttgaag gctcgctggt tgaaccgctt tcctgcgtga ttggcgcgtt
    21301 caacgccaac tatcatcttc aggaaggtag ttataaccac acgatgggga ttcgcccgca
    21361 agggcgcacg ctgatcctcg gcggcaccgg accaatggga ctgttggcga ttgattatgc
    21421 gctacatggc cccgttaacc cgtcgctgct cgtcattacc gataccgaca acgataaatt
    21481 gagttatgcg cggaagcact atccatcaga accgcaaaca ctgattcatt atctcaatgc
    21541 caccgatgca gcatttgata cgttaatggc gctgagtggc ggtcacggct tcgatgatat
    21601 tttcgtcttt gtgcctaatg aaggactggt gactctcgcc tcttccttgc tggcgacaga
    21661 tggttgcctg aatttcttcg ccggaccgca ggataaacat ttcagcgagc caattaattt
    21721 ctacgatgtg cattatgcat ttacccacta cgtgggcacg tcaggcggca ataccgacga
    21781 catgcgcgcg gcggtcaaac tgatcgaaga gaaaaaagtg caggccgcaa aagtggtaac
    21841 acatattctt gggctgaatg ccgcgggcga aaccacgctt gaattgcctg ccgtcggcgg
    21901 cggcaaaaag ctggtgtata ccgggaaata cctgccgctg acgtcactca cgcagattca
    21961 ggatcaagca ctggcggcga ttctggcgcg tcatcagggg atctggtccg gtgaggcgga
    22021 gcaatacctg ctcgcccatg cagaggcaat ttcccatgat taatcgcgct acttaactct
    22081 gcatgtcgct ggctggtcgc cccggcaact tcgcgaccgg atgtgcggct gattgctgaa
    22141 gcagcacaat ttgcacgaga aggataaaaa atatcagcgc cttaaggggc gctcaaattg
    22201 gtggcaaagt acacattgtt tatgccggat gcggaatgaa gccttattcg gtctacataa
    22261 ttttgaaaat tcaatatatt gcagttatct ggtaggctag gtaagcgtag cgcatcaggc
    22321 aatgctgtgt ttgtcatcag tctcagcgcc cggtgcaata cgtgacatcg tgagccatgt
    22381 cagtaagtgg ttaaattcgc agtggtagca tgcctcccgt gatttcttac taaccggaga
    22441 agtaatggaa ctgcttttat tgagtaactc gacgctgccg ggtaaagcct ggctggaaca
    22501 tgcgctgccg ctgattgctg aacagttgca gggtcgccgc tcagcggtat ttattccttt
    22561 cgctggcgta acgcagacct gggatgatta cacagcgaaa acggctgcgg ttctcgctcc
    22621 gctgggtgtt tctgtcaccg gtattcatag cgttgtcgat cccgttgccg ctattgaaaa
    22681 tgctgagatc gtgattgtcg gcggcggtaa tactttccag ttgctgaaac agtgccgcga
    22741 gcgcgggctg ctggcaccaa ttactgacgt ggttaaacgt ggcgcgctgt atattggctg
    22801 gagcgcaggc gctaaccttg cttgcccaac cattcgtacc accaacgata tgccgattgt
    22861 cgatccgcaa ggtttcgatg cgctgaatct gttcccgttg caaatcaacc cgcacttcac
    22921 caacgcgctg ccggaaggcc ataaaggtga aacccgtgaa cagcgtattc gcgaactgct
    22981 ggtcgtcgcg ccagaactca caattattgg tctaccggaa ggtaactgga tcacagtgag
    23041 taaaggtcac gcaacgctgg ggggcccgaa caccacttat gtgtttaagg ctggtgaaga
    23101 agcggttccg ctagaagctg gtcaccgttt ttaagtgaat tgccggatgt atgatccggc
    23161 atcttgttca tagtgcctga tgcgacgctt gacgcgtctt atcaggccta caggattcac
//
LOCUS       DAJVTL010000061        23183 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.061, whole genome shotgun sequence.
ACCESSION   DAJVTL010000061 DAJVTL010000000
VERSION     DAJVTL010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23183
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.061"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            310..441
                     /locus_tag="OQQ26_002314"
     CDS             310..441
                     /locus_tag="OQQ26_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA invertase"
                     /protein_id="HCS1857751.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNAFICAGSELIVERMGSWPEVVMA"
     gene            701..1696
                     /gene="pgl"
                     /locus_tag="OQQ26_002315"
     CDS             701..1696
                     /gene="pgl"
                     /locus_tag="OQQ26_002315"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HCS1857752.1"
                     /translation="MKQTVYISSPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN
                     AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
                     HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
                     DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
                     SRGFNIDHRGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
     gene            complement(1735..2691)
                     /locus_tag="OQQ26_002316"
     CDS             complement(1735..2691)
                     /locus_tag="OQQ26_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1857753.1"
                     /translation="MKHELSSMKAFVTLAESTSFNNAAKLLNITQPALTRKIKKMEED
                     LHIQLFERTTRKVTLTTAGKMLLPEARELIKKFDETLFNIREMNHYHRGIVTLACIPT
                     AVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNLSIDFT
                     PLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQNLADKPWKLD
                     WFYEVRHLSTSLGLVEAGLGISALPSLAMPHAPSSSIIGIPLVEPVIRRTLGVIRRKD
                     AVLSPAAERFFALLINLWTDDKDNLWTKIVERQRQTLQVMGK"
     gene            2873..3925
                     /locus_tag="OQQ26_002317"
     CDS             2873..3925
                     /locus_tag="OQQ26_002317"
                     /EC_number="5.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalomesaconate tautomerase"
                     /protein_id="HCS1857754.1"
                     /translation="MKKIPCVMMRGGTSRGAFLLAEHLPEDQAQRDKILMAIMGSGND
                     LEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGA
                     FAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGCARIDGVPGTAAPVA
                     LTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPTELD
                     ADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRA
                     LAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRAS
                     VIRTTRKIFSGEVYLP"
     gene            4001..5434
                     /locus_tag="OQQ26_002318"
     CDS             4001..5434
                     /locus_tag="OQQ26_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HCS1857755.1"
                     /translation="MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIV
                     GLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAA
                     FVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSV
                     AVALGSEPEKSPRRVGHYLMMSIYMVTKTTCYMFFTAMAGNILALKMINDILHLQISW
                     GGWALAAGLPGIIMLLVTPLVIYTMYPPEIRKVDNKTIAKAGLAELGPMKIREKMLLG
                     VFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGII
                     GLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAML
                     PVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGA
                     VLTILTFLVHITLGVWWWNMLIGWNML"
     gene            5617..7878
                     /locus_tag="OQQ26_002319"
     CDS             5617..7878
                     /locus_tag="OQQ26_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706815.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HCS1857756.1"
                     /translation="MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSS
                     HNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGT
                     INGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTM
                     AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVK
                     NKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQL
                     NPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAH
                     GKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANVLRGQSCGNDTFSLAVYPS
                     SQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREG
                     SKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQG
                     FVKGATQQPLIYGPNIKDWPELGSLTDNIVLKVCSKILDEVTTTDELIPSGETSSYRS
                     NPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPL
                     QTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQM
                     AEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIK
                     AGSLINFNKNRQM"
     gene            complement(8112..9395)
                     /locus_tag="OQQ26_002320"
     CDS             complement(8112..9395)
                     /locus_tag="OQQ26_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HCS1857757.1"
                     /translation="MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPI
                     LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
                     AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
                     DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDLVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT
                     NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
                     AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAMISNRPFAGNTGSVD
                     DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK"
     gene            complement(9546..10022)
                     /locus_tag="OQQ26_002321"
     CDS             complement(9546..10022)
                     /locus_tag="OQQ26_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HCS1857758.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
                     YDGAAPPKGETHRYIFTVHALDVERIDVDEGASGAMVGFNVHFHSLASASITAMFS"
     gene            complement(10081..11370)
                     /gene="bioA"
                     /locus_tag="OQQ26_002322"
     CDS             complement(10081..11370)
                     /gene="bioA"
                     /locus_tag="OQQ26_002322"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HCS1857759.1"
                     /translation="MTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRR
                     LVDGMSSWWAAIHGYNHPQLNAAMKTQIDAMSHVMFGGITHTPAIELCRKLVAMTPQP
                     LECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS
                     MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG
                     GMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKAL
                     TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ
                     QVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRP
                     FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ"
     gene            11457..12497
                     /gene="bioB"
                     /locus_tag="OQQ26_002323"
     CDS             11457..12497
                     /gene="bioB"
                     /locus_tag="OQQ26_002323"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HCS1857760.1"
                     /translation="MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
                     KNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLADAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLITPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT
                     PDTDEYYNAAAL"
     gene            12494..13648
                     /gene="bioF"
                     /locus_tag="OQQ26_002324"
     CDS             12494..13648
                     /gene="bioF"
                     /locus_tag="OQQ26_002324"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HCS1857761.1"
                     /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF
                     SSNDYLGLSHHPQIIRAWKQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRA
                     LLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLAR
                     LLASPCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
                     SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQAL
                     RASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL
                     VEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG"
     gene            13635..14390
                     /gene="bioC"
                     /locus_tag="OQQ26_002325"
     CDS             13635..14390
                     /gene="bioC"
                     /locus_tag="OQQ26_002325"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HCS1857762.1"
                     /translation="MATVNKQAIAAAFGRAAALYEQHADLQRQSADVLLAMLPQRKYT
                     HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATA
                     TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERP
                     HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
                     TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
     gene            14383..15060
                     /gene="bioD"
                     /locus_tag="OQQ26_002326"
     CDS             14383..15060
                     /gene="bioD"
                     /locus_tag="OQQ26_002326"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706656.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HCS1857763.1"
                     /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
                     EKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG
                     LCALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
                     QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
                     YINLALL"
     gene            15639..17660
                     /gene="uvrB"
                     /locus_tag="OQQ26_002327"
     CDS             15639..17660
                     /gene="uvrB"
                     /locus_tag="OQQ26_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HCS1857764.1"
                     /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVIVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
                     NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVWPVATQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
                     MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
     gene            complement(17852..18760)
                     /gene="yvcK"
                     /locus_tag="OQQ26_002328"
     CDS             complement(17852..18760)
                     /gene="yvcK"
                     /locus_tag="OQQ26_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HCS1857765.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
                     IQELLLTPNVPATREAVHAINEVDLIIIGPGSFYTSLMPIRLLKEIAQALRRTPAPMV
                     YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     regulatory      19025..19169
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            19157..20146
                     /gene="moaA"
                     /locus_tag="OQQ26_002329"
     CDS             19157..20146
                     /gene="moaA"
                     /locus_tag="OQQ26_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HCS1857766.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
                     YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
                     VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
                     RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF
                     GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG"
     gene            20168..20680
                     /gene="moaB"
                     /locus_tag="OQQ26_002330"
     CDS             20168..20680
                     /gene="moaB"
                     /locus_tag="OQQ26_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HCS1857767.1"
                     /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
                     VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            20683..21168
                     /gene="moaC"
                     /locus_tag="OQQ26_002331"
     CDS             20683..21168
                     /gene="moaC"
                     /locus_tag="OQQ26_002331"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HCS1857768.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
                     D"
     gene            21161..21406
                     /gene="moaD"
                     /locus_tag="OQQ26_002332"
     CDS             21161..21406
                     /gene="moaD"
                     /locus_tag="OQQ26_002332"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706662.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HCS1857769.1"
                     /translation="MIKVLFFAQVRELVGTDATEVAADYPTVEALRQHLAAQSERWAL
                     ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
     gene            21408..21860
                     /gene="moaE"
                     /locus_tag="OQQ26_002333"
     CDS             21408..21860
                     /gene="moaE"
                     /locus_tag="OQQ26_002333"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HCS1857770.1"
                     /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSA
                     HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW"
     gene            21997..22701
                     /locus_tag="OQQ26_002334"
     CDS             21997..22701
                     /locus_tag="OQQ26_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HCS1857771.1"
                     /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
                     SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSVLTGLTLSS
                     IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
                     LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD
                     FINLFLMLLRIFGNRR"
     gene            22895..>23183
                     /locus_tag="OQQ26_002335"
     CDS             22895..>23183
                     /locus_tag="OQQ26_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor (BI)-1/YccA family protein"
                     /protein_id="HCS1857772.1"
                     /translation="MESYSQNSNKLDFQHEARILNSIWLITALGLVATAGLAWGAKYL
                     EITATKYDSPTMYVAIGLLLVCMYDLSKDINKINAVIAGVIYLFLLSLVAIV"
BASE COUNT         5649 a         5695 c         6123 g         5716 t
ORIGIN      
        1 gcagaggatt tataccagaa gacattagtc ttgagtaaga tactacaaca tctccaacta
       61 ttttagccag cctgactact tgacttggta atattcgttg ctaataatca tgtataaaat
      121 aagcttatat acatagtaac ttcagcaaag gatttagtaa tgatccaaat catatctcaa
      181 tgtactgttt ttttcttaaa aaaaacagta cattctattt tataatgcct gtgtattccc
      241 atggaaggag atcacccaat tctccccccc gacttttgac gcagtgtctt gttaacaggg
      301 ggatttacca tgcttattgg ctatgtacgc gtatcaacaa atgaccagaa taccgatcta
      361 caacgtaatg cgtttatttg tgccggaagt gagttgattg ttgagcgaat gggaagttgg
      421 ccagaagttg ttatggcata gtgtttacgg tcgttaatac aggtaaacaa aagcggggag
      481 agtcatactc cctgaatagt cgcgaaaata tctgtggcat tgtcaaattc gtgtcggtga
      541 ctaatatttt agtaatatgc cattcgaaat ggagtgctaa cttattgatt taattgatgt
      601 gcgatattgt attttatcgt gttttgttgt ctgtttttta tccagtaagt gttgttatgt
      661 gcatgaaaga taagggattt atcatttttg aggtgtgttc atgaagcaaa cagtttatat
      721 ctccagccct gagagccagc aaattcacgt ctggaacctg aatcatgaag gcgcactgac
      781 gctgacacag gttgtcgatg tgccggggca ggtgcagccg atggtggtca gcccggacaa
      841 acgttatctc tatgttggtg ttcgccctga gtttcgcgtc ctggcgtatc gtatcgcccc
      901 ggacgatggc gcactgacct ttgccgcaga gtctgcgctg ccgggtagtc cgacgcatat
      961 ttccaccgat caccaggggc agtttgtctt tgtaggttct tacaatgcgg gtaacgtgag
     1021 cgtaacgcgt ctggaagatg gcctgccagt gggcgtcgtc gatgtggtcg aggggctgga
     1081 cggttgccat tccgccaata tctcaccgga caaccgtacg ctgtgggttc cggcattaaa
     1141 gcaggatcgc atttgcctgt ttacggtcag cgatgatggt catctggtgg cgcaggaccc
     1201 tgcggaagtg actaccgttg aaggggccgg cccgcgtcat atggtattcc atccaaacga
     1261 acaatatgcg tattgcgtca atgagttaaa cagctcagtg gatgtctggg aactgaaaga
     1321 tccgcacggc aatatcgaat gtgtccagac gctggatatg atgccggaaa acttctccga
     1381 cacccgttgg gcggctgata ttcatattac cccggatggt cgtcacttat atgcctgtga
     1441 ccgtaccgcc agcctgatta ctgtcttcag cgtttcggaa gatggcagcg tgttgagtaa
     1501 agagggcttc cagccaactg aaacccagtc gcgcggcttt aatatcgatc accgtggtaa
     1561 gtatctgatt gccgccgggc aaaaatctca ccacatctcg gtatacgaaa ttgttggtga
     1621 gcaggggcta ctgcatgaaa aaggccgcta tgcggtcggg caggggccga tgtgggtggt
     1681 agtgaacgca cactaattgt tgataatcct ggcgcggcat ctcccgctcc gggattattt
     1741 tcccatcacc tgtaatgtct gtctctgacg ttcaacgatc ttggtccaca gattatcctt
     1801 atcgtcagtc cacaaattaa taagtaacgc aaaaaagcgt tctgctgctg gagaaagcac
     1861 tgcatcttta cggcgaatca cacccaatgt gcggcgaatt actggttcta ccagggggat
     1921 accaataata gaagaagagg gcgcatgggg cattgccagg cttggtagtg ccgaaattcc
     1981 cagtccagcc tccaccagtc ctaatgacgt tgaaagatgg cgcacttcgt aaaaccagtc
     2041 cagtttccag ggtttgtcgg ccaaattttg ttcaatcaac aatcggttgc cgctggagga
     2101 gcgtacgcca atcattttgt aaccgactaa ctcctgccat tcaactagct gctttttggc
     2161 taaaggatgg tcacgccgac aggccagcac gaatggctcg ttgaccaggg gagtaaaatc
     2221 gatagataaa tttgtgacgt tgttcatgtt tatgccaaaa tcagattcgt tgcacagcac
     2281 cgattccatg caattattcg tgccttgttc cagaatccgc actttaatat tgggatatag
     2341 ctcattaaat ttgccgatcg ccaatggcaa gaaatagaac acggcggtcg gaatacacgc
     2401 taatgtcact ataccacgat gataatgatt catttcccga atattaaaaa gtgtttcatc
     2461 aaattttttt attaattccc gcgcctcagg aagcaacatt ttccccgctg ttgttaatgt
     2521 aaccttgcga gttgtacgct caaaaagttg aatatgtaaa tcttcttcca tcttttttat
     2581 ttttcgcgtt aacgcgggtt gtgtaatgtt aagtaatttg gcggcgttgt taaatgaagt
     2641 cgactctgcc agagtgacaa atgccttcat acttgataat tcatgcttca ttgctactcc
     2701 agaaaatgga aaggttctct tttagcgttt cgctttaaac cgtttaactg cattttaatc
     2761 acttaaatta atgaaaaaag taattaatcg tgaagataaa gtcattagtg cggttttgtc
     2821 cttaatgtaa ccatatcgca ataagttatg tttttaaatt gagggcatta ttatgaaaaa
     2881 aataccctgc gtgatgatgc gaggtggaac ctcgaggggc gcgttcctgt tagcggaaca
     2941 tttacccgaa gatcaagcgc agcgcgataa aatattgatg gcaattatgg gttccggtaa
     3001 cgatctggaa attgacggta ttggcggcgg taatccgctg accagtaaag tcgccattat
     3061 tagccgttcc agcgatccgc gtgctgatgt cgattatctg tttgctcaag ttattgtcca
     3121 tgagcaacgt gtcgatacca cgcctaattg tggcaatatg ctgtctggtg ttggggcatt
     3181 cgccattgaa aatggtttga ttgcagcgac ttcaccagtt acccgcgtac gtatccgcaa
     3241 cgtcaatacg ggtacgttca tcgaagctga tgtgcaaacg ccaaatggtg ttgtcgagta
     3301 cgagggttgc gccagaattg acggcgtacc gggtactgcc gcaccggttg cgctcacttt
     3361 cctgaatgcc gccggaacca aaaccggaaa agtcttcccg actgataatc agattgatta
     3421 ttttgacgat gtcccggtga cctgtatcga tatggcgatg ccagttgtca ttattcctgc
     3481 tgaatatctg ggaaaaacag gctatgaatt accgacggag ttggatgccg acaaagcatt
     3541 attagctcgc attgaatcta tccgtctaca agcgggtaaa gcaatgggct taggcgatgt
     3601 cagtaatatg gttatcccta aacctgtgct tatttctcca gcgcagaaag gcggggcaat
     3661 taatgtgcgt tattttatgc cgcattcttg ccatcgcgcg ctggcgataa ccggtgctat
     3721 tgctatttcc agtagttgtg cattggaagg caccgtcacc cgacaaatcg tcccttctgt
     3781 aggatatggc aatatcaata ttgaacaccc cagtggtgcg ctcgacgttc atttaagtaa
     3841 tgaaggtcag gatgccacga cgttacgcgc atctgttatt cggacaacca gaaaaatatt
     3901 ttccggtgaa gtttatcttc cctgaaaaaa ttcgttgtca ggataaggac aatcaataaa
     3961 ggacttctgt atgagtcata cagaaagaac aggattttaa atgaataaga aatcgttatg
     4021 gaagctaatt ctgatattag cgatcccatg tattattggt tttatgccag ctccggcagg
     4081 attaagcgaa ctggcgtggg tgctttttgg tatttacctg gcggccattg tgggtctggt
     4141 tatcaagcct ttcccggaac ctgtcgtact gttaattgcc gttgctgcct caatggtggt
     4201 ggtcggtaac ttatccgacg gtgcgtttaa gaccaccgcc gtattaagcg gttactcttc
     4261 aggtactacc tggctggtgt tctcggcgtt taccttaagc gccgcatttg tgaccaccgg
     4321 tttaggtaaa cgtattgcct atctgctgat tggtaaaatc ggtaacacca cgctgggtct
     4381 gggttacgtt acggtattcc tcgatctggt attggctccg gcaacaccgt ctaacaccgc
     4441 gcgtgcgggc ggcattgtgt taccgatcat caacagcgtg gcggtggctt tggggtcaga
     4501 accggaaaaa agtccgcgtc gtgtcggaca ttacctgatg atgtccattt acatggtcac
     4561 caaaaccacc tgctatatgt tctttaccgc aatggcgggg aacattctgg cgctgaaaat
     4621 gatcaacgac attctgcacc tgcaaattag ctggggtgga tgggcgctgg ccgccggatt
     4681 gccgggcatc attatgctgc tggttactcc gctggtgatt tataccatgt atccgccaga
     4741 aattaggaag gtggataaca aaaccatcgc taaagcgggc cttgccgaac tgggaccgat
     4801 gaaaatccgc gaaaaaatgc tgctcggtgt ctttgtgctg gcgctactgg gctggatttt
     4861 cagtaagtct ctgggggttg atgaatccac cgtggcaatc gttgttatgg cgactatgct
     4921 gctgctgggt atcgttacct gggaagacgt ggttaaaaat aaaggcggct ggaatacctt
     4981 aatctggtac ggcggtatta tcggcttaag ctccttatta tcgaaagtta aatttttcga
     5041 atggttagct gaagtcttta aaaataacct ggcatttgat ggtcacggta atgttgcttt
     5101 cttcgttatt attttcctca gcatcatcgt gcgttatttc ttcgcttccg gtagtgccta
     5161 tatcgttgct atgttaccgg tatttgccat gctggcgaac gtctccggcg caccgttaat
     5221 gttaaccgcg ctggcactgt tgttctccaa ctcctatggc ggcatggtta ctcactatgg
     5281 cggcgcggca ggtccggtca tctttggcgt gggttacaac gatattaaat cctggtggtt
     5341 ggtcggtgcg gtactgacga tattaacctt cctggtgcat atcaccctcg gcgtgtggtg
     5401 gtggaatatg ctgatcggct ggaacatgct gtaaatattc tcgtcatact tcaagttgca
     5461 tgtgctgcgt ctgcgttcgc tcaccgcagt cacttactta tgtaagctcc tggggattca
     5521 ctcgcttgtc gccttcctgc aactcgaatt atttagagta tatccattta ttatctttct
     5581 gcgcacttca cggtgcgcag atatctggag catttgatga tcaagttatc tgaaaaaggc
     5641 gtgtttctcg ccagtaataa cgaaataatt gccgaagaac atttcaccgg cgaaattaaa
     5701 aaagaagaag ccaaaaaagg cactattgcc tggtctattc tctcttctca taatacgtcc
     5761 ggaaatatgg ataaacttaa aattaagttt gattcattag cctctcacga tattaccttt
     5821 gttggtattg tacagaccgc taaagcgtcc ggaatggaac gtttcccgct gccgtatgtg
     5881 ctgaccaact gccataactc actctgcgcc gtcggcggca ccattaacgg tgatgaccat
     5941 gtttttggtt tatcggcagc tcagcgttat ggcggtattt ttgtgcctcc gcatattgcg
     6001 gtcatccatc aatatatgcg tgagatgatg gcaggcggcg gcaaaatgat cctcgggtca
     6061 gacagccaca cccgttacgg tgcattaggg acaatggcag tcggtgaggg cggcggtgag
     6121 ttggtaaaac agctgcttaa tgacacctgg gatatcgact atccgggagt tgttgcggtg
     6181 catctgaccg gaaaaccagc gccgtatgtg gggccgcagg atgtggcgct ggctatcatc
     6241 ggtgccgtgt tcaaaaacgg ctacgtcaaa aacaaagtga tggaattcgt aggtcccggt
     6301 gttgctgcgc tctctaccga tttccgtaac agcgttgacg ttatgaccac tgaaacgacc
     6361 tgtttaagtt ctgtctggca aaccgatgaa gaagtccata actggctggc gctgcacggt
     6421 cgcggccagg attactgcca gcttaaccct caaccgatgg cgtactacga tggctgcatc
     6481 agcgttgatt taagcgccat caaaccaatg attgcgctgc cgttccaccc gagcaacgtg
     6541 tatgaaatcg acacactgaa ccagaacctg accgacattc tgcgtgagat tgaaattgag
     6601 tccgaacgcg tggcgcacgg taaagccaaa ctctcgctgc tggataaagt ggaaaatggt
     6661 cgcctgaaag tgcagcaggg gattatcgcg ggctgttctg gcggtaacta cgaaaacgtc
     6721 atcgcggcgg cgaatgtact gcgcgggcaa tcctgtggca acgacacctt ctcgttagcg
     6781 gtttacccgt catcacagcc ggtgtttatg gatctcgcca aaaaaggtgt ggtagcagat
     6841 ttgattggcg caggcgcaat catcagaacc gcgttctgcg gcccatgctt tggcgcgggc
     6901 gatacgccaa tcaacaacgg tttgagtatt cgccacacca cgcgtaactt cccgaaccgc
     6961 gaaggctcta agccagctaa tgggcagatg tcagcggtgg cgttgatgga cgctcgttct
     7021 atcgctgcga ctgcggcaaa cggtggctat ttaacctctg ccagcgaact tgattgctgg
     7081 gacaacgtgc cggagtacgc cttcgatgta acgccgtata aaaaccgtgt ttatcagggc
     7141 tttgtgaaag gggcaacaca gcaaccgctg atttacggac cgaacattaa agactggccg
     7201 gaattgggtt cgctgactga caatatcgtc ctcaaagtgt gctcgaagat cctcgacgaa
     7261 gtgaccacca ccgacgaatt gattccttcc ggtgaaacct cttcttatcg ttcaaatccg
     7321 attggtctgg cggagtttac cctgtcacgc cgcgatccag gttatgttgg cagaagtaaa
     7381 gcgactgctg agctggaaaa tcagcgtctg gcggggaatg tcagcgagct gacagaggtg
     7441 tttgcgcgca ttaagcagat tgctggtcag gagcatattg atccgctgca aactgaaatt
     7501 ggcagcatgg tctatgcggt gaaaccaggc gatggttctg cgcgtgaaca ggcggcgagc
     7561 tgccagcgtg tgattggcgg tctggcgaat attgccgagg agtacgcgac taaacgctac
     7621 cgttctaacg tcatcaactg ggggatgtta ccgctgcaga tggcggaagt gccaaccttt
     7681 gaagtggggg attacattta catccctggc attaaagcgg cgctggataa tccgggtacg
     7741 acgtttaaag gttatgtgat ccatgaagat gcgccggtaa cggaaattac gctttacatg
     7801 gaaagcctga cggccgaaga gcgcgagatt atcaaggcgg gtagtttgat taacttcaat
     7861 aaaaaccgtc agatgtaaaa agcgccatat gaatgtaggt cgcatccggt acttattgtc
     7921 ggatgcgatg cttgcgcatc ttatccgacc tacgaatcgc atcgaatctg taggccagat
     7981 aaggcattta cgcagcatcc ggcacttatt gtcggatgcg atgcttgcgc atcttatccg
     8041 acctacaaat cgcatcgaac cgtaggccgg ataaggcgtt tacgccgcat ccggcaaata
     8101 gttaattgct cttacttctt cgcctctgca accactttac tacccacgcc gcggttattg
     8161 tattcccaca tgcggttgta gttagtgtca ttcagattgc gctgtatttc gtcgttatca
     8221 tctacgctgc cggtattacc cgcaaacgga cgattagaga tcatcgcatc ggcccacggt
     8281 ttagccgtgt taaaaccttc gttgatggca ctatcacgga tcaccacctg accgttggta
     8341 tttgcatcaa catccagcga gcggcccagt tgcgccacgc catcaccgaa agcattgaaa
     8401 cggctgttta cggcgaggaa accgtagtaa atgttggaca gcgttgccgg tgcaaacaca
     8461 tacgcttctt gctgagtacg tgagttcacc acgcggaatt cggtgttatc gaacaccact
     8521 gcgccgcgac cagaaacgat atccacatcc ccttcaatgt agctgttggt caccagcgta
     8581 cgcggctgac gattcgtttc cagacggttc tgcacaccgc tgttggtgac aaagaaggtg
     8641 ttctgacgac cgagaatgtt aacgttgtta atctgtacca ggtcaccgtc agtacgcagt
     8701 gccaccgccg gatggttacc tgcatctacg ctatcgccca gcgtgttttc gatggtcaga
     8761 ttttgcagtt gcaggccatt gttttgtgac cagaagaccg cagaacagag aacaccgata
     8821 ctgtcgctgc gtttgctctg gcagctatcg tacatatacc acgctggttt acctggcata
     8881 tatttgccgc gcgggttgac gtcgtgacgc cagtcggcag ggctcatgcc accatcaagg
     8941 gaaagcccaa tcttcacatc aatcggtttt tcacctgtac cgtacagagt aattccaccc
     9001 ggagcggcag ggacatatac cgttccctga tactcaccag gcatcacggc aatatactgg
     9061 cgcttgttgg tacgcttgat aattgccgca tctaccgccg cctgaatcgt ggtatgcgtt
     9121 acaccttgag tgcccgccgg gccgacaaca aagtcaggtt gcgcaggcag ggtaatcggg
     9181 gaaggattcc acgctgccgc acctggtgtc agggatgcaa aatagtgttg agcatcgaaa
     9241 ttctgcgctt cttttgccga cagaatcggg cgagaagagg taccaggcgc ggtttgatca
     9301 gaaggacgtt gatcgggcgg ggttgagcta caggcggtca gcgtcacgcc aaaagccaat
     9361 gccagcgcca gacgggaaac tgaaaatgtg ttcacaggtt gctccgggct ataaaataga
     9421 aaaatgaatc cgttgaagcc tgctttttat actaacttta gcgaaacggg aaggtaaaaa
     9481 gacaaaaagt tgtttttaat acctttaagt gataccagat ggcattgcgc catctggcag
     9541 agtgattaac taaacatcgc agtaatcgag gcgcttgcca gagagtggaa atggacgtta
     9601 aacccgacca tcgcgccgct ggcaccttca tcgacatcaa tacgttctac atccagcgcg
     9661 tgaacggtaa aaatgtagcg atgggtttcg cctttcggcg gcgctgcacc atcgtaccct
     9721 gttttaccaa agtcggtacg cgtctgcaaa acgccgtctg gcattgctac cagaccagag
     9781 ccaaaccctt gcggtaatac gcgggtatca gcgggtaaat taacaactac ccagtgccac
     9841 cagccggagc cggttggcgc atccgggtcg tagcaggtga cgacaaaact tttcgttccc
     9901 gcaggaacat catcccacgc cagatgcggt gaaatattat cgccatcgta acccatgccg
     9961 ttaaagacat gacgatgcgg cagcttatcg ccatcgcgca gatcattact gatgagtttc
    10021 atgaaccctc ctttctagtt tgcagaaagt gtagccagaa acccacacgc tgacttcccg
    10081 ttattggcaa aaaaatgttt catcctgcac cgcacggtta accgctgcgg tcagacgctg
    10141 caactgttgc gggagaataa tatagggcgg catcaggtaa atcagtttgc caaaaggccg
    10201 gatccatacc ccctgttcga caaagaattt ttgcagcgcc gccatattca ccggacgagt
    10261 ggtttcgacc acgccaatgg cccctagcac gcgcacatcg gcaaccattt cggcatcacg
    10321 ggcgggggca agttgctcgc gcagctgtac ttcaatatcc gccacctgtt gctgccagtc
    10381 gccagattcg agaatcgcca ggctggcgtt tgcagccgcg caggccagcg gattgcccat
    10441 aaaagttggc ccatgcataa agcagccggc ttcgccgtta ctgatggttt ctgcaacctc
    10501 gcgcgtggta agtgtggcgg aaagggtcat tgtgccgccg gttaaggctt taccgaggca
    10561 caaaatgtcc ggcgcgattt ctgcatattc acaggcaaac agtttgccgg tacgaccaaa
    10621 tccggtggcg atctcgtcgg caatcagcaa gataccttcg cgatcgcaca ttttgcggat
    10681 tcgttttaac cattccggat ggtacatgcg catcccgcct gcgccctgga caatcggctc
    10741 aatgatcacc gctgcgattt catgacgatg cgccgccatc aggcgggcaa aaccaaccat
    10801 atcgcgttca tcccattcac catccatgcg gctttgcggg gcgggagcaa acaagttttc
    10861 tggcagatag cctttccaca ggctgtgcat tgagttgtcc ggatcgcaca ccgacatcgc
    10921 gccaaaggta tcgccatgat aaccattgcg gaaggtcaga aaacgctggc gcgcttcgcc
    10981 tttggcttgc cagtactgca acgccatttt catcgccact tccaccgcta cggaaccgga
    11041 gtccgcgaga aaaacgcatt ccagtggttg cggcgtcatc gccaccagtt tgcggcacag
    11101 ctcaatggct ggcgtatgag tgataccgcc aaacatcaca tgcgacatgg catcaatttg
    11161 cgtcttcatc gccgcattaa gctgcgggtg attgtagccg tggatcgccg cccaccagga
    11221 cgacataccg tcaaccaggc gtctgccgtc agacaaaatt agctcgcaac cttcggcgct
    11281 cgccaccgga taaaccggca gaggggaggt catggatgtg tatgggtgcc agatatggcg
    11341 ttggtcaaag gcaagatcgt ccgttgtcat aatcgacttg taaaccaaat tgaaaagatt
    11401 taggtttaca agtctacacc gaattaacaa caaaaaacac gttttggaga agccccatgg
    11461 ctcaccgccc acgctggaca ttgtcgcaag tcacagaatt atttgaaaaa ccgttgctgg
    11521 atctgctgtt tgaagcgcag caggtgcatc gtcagcattt cgatcctcgt caggtacagg
    11581 tcagcacttt gctgtcgatt aaaaccggag cttgtccgga agattgcaaa tactgcccgc
    11641 aaagctcgcg ctacaaaacc gggctggaag ccgagcggtt gatggaagtt gaacaggtgc
    11701 tggagtcggc gcgcaaagcg aaagcggcag gatcgacgcg cttctgtatg ggcgcggcgt
    11761 ggaagaatcc ccacgaacgc gatatgccgt acctggaaca aatggtgcag ggggtaaaag
    11821 cgatggggct ggaggcgtgt atgacgctgg gcacgttgag tgaatctcag gcgcagcgcc
    11881 tcgcggacgc cgggctggat tactacaacc acaacctgga cacctcgccg gagttttacg
    11941 gcaatatcat caccacccgc acttatcagg aacgcctcga tacgctggaa aaagtgcgcg
    12001 atgccgggat caaagtctgt tctggcggca ttgtgggctt aggcgaaacg gtaaaagatc
    12061 gcgccggatt attgctgcaa ctggcaaacc tgccgacgcc gccggaaagc gtgccaatca
    12121 acatgctggt gaaggtgaaa ggcacgccgc ttgccgataa cgatgatgtc gatgcctttg
    12181 attttattcg caccattgcg gtcgcgcgga tcatgatgcc aacctcttac gtgcgccttt
    12241 ctgccggacg cgagcagatg aatgaacaga ctcaggcgat gtgctttatg gcaggcgcaa
    12301 actcgatttt ctacggttgc aaactgctga tcacgccgaa tccggaagaa gataaagacc
    12361 tgcaactgtt ccgcaaactg gggctaaatc cgcagcaaac tgccgtgctg gcaggggata
    12421 acgaacaaca gcaacgtctt gaacaggcgc tgatgacccc ggacaccgac gaatattaca
    12481 acgcggcagc attatgagct ggcaggagaa aatcaacgcg gcgctcgatg cgcggcgtgc
    12541 tgccgatgcc ctgcgtcgcc gttatccggt ggcgcaagga gccggacgct ggctggtggc
    12601 ggatgatcgc cagtatctga acttttccag taacgattat ttaggtttaa gccatcatcc
    12661 gcaaattatc cgtgcctgga agcagggggc ggagcaattt ggcatcggta gcggcggctc
    12721 cggtcacgtc agcggttata gcgtggtgca tcaggcactg gaagaagagc tggccgagtg
    12781 gcttggctat tcgcgggcac tgctgtttat ctctggtttt gccgctaatc aggcagttat
    12841 tgccgcgatg atggcgaaag aggaccgtat tgctgccgac cggcttagcc atgcctcatt
    12901 gctggaagct gccagtttaa gtccgtcgca gcttcgccgt tttgctcata acgatgtcac
    12961 tcatttggcg cgactgcttg cttccccctg tccggggcag caactggtgg tgacagaagg
    13021 cgtgttcagc atggacggcg atagtgcgcc actggcggaa atccagcagg taacgcaaca
    13081 gcacaatggc tggttgatgg tcgatgatgc ccacggcacg ggcgttatcg gggagcaggg
    13141 gcgcggcagc tgctggctgc aaaaggtaaa accagaattg ctggtggtga cttttggcaa
    13201 aggatttggc gtcagtgggg ctgcggtgct ttgctccagt acggtggcgg attatctgct
    13261 gcaattcgcc cgccatctta tctacagcac cagtatgccg cccgctcagg cgcaggcatt
    13321 acgtgcgtcg ctggcggtca ttcgcagtga tgagggtgat gcgcggcgcg aaaaactggc
    13381 ggcactcatt acgcgttttc gtgccggagt acaggatttg ccgtttacgc ttgctgattc
    13441 atgcagcgcc atccagccat tgatcgtcgg tgataacagc cgtgcgttac aactggtaga
    13501 aaaactgcgc cagcaaggct gctgggtcac ggcgattcgc ccgccaaccg tacccgctgg
    13561 tactgcgcga ctgcgcttaa cgctaaccgc agcgcatgaa atgcaggata tcgaccgtct
    13621 gctggaggtg ctgcatggca acggttaata aacaagccat tgcagcggca tttggtcggg
    13681 cagccgcact ctatgagcaa cacgcagatc tacagcgcca gagtgctgac gtcttactgg
    13741 caatgctccc acagcgtaaa tacacccacg tactggacgc gggttgtgga cctggctgga
    13801 tgagccgcca ctggcgggaa cgtcacgcgc aggtgacggc gttagatctc tcgccgccaa
    13861 tgcttgcgca agcccgccag aaagatgctg cagaccatta tctggcggga gatatcgaat
    13921 ccctgccgtt agcgactgcg acgttcgatc ttgcatggag caatctcgcg gtgcagtggt
    13981 gcggtaattt atccacggca ctccgcgagc tgtatcgggt ggtgcgcccc ggaggcgtgg
    14041 tggcgtttac cacgctggtg cagggatcgt tacccgaact gcatcaggcg tggcaggcgg
    14101 tggacgagcg tccgcatgct aatcgctttt taccgccaga tgaaatcgaa cagtcgctga
    14161 acggcgtgca ttatcaacat catattcagc ccatcacact atggtttgat gatgcgctca
    14221 gtgccatgcg ttcgctgaaa ggcatcggtg ctacgcatct tcatgaaggg cgcgacccgc
    14281 gaatattaac gcgttcgcaa ttgcagcgat tgcaactggc ctggccgcaa caacaggggc
    14341 gatatcctct gacgtatcat ctttttttgg gagtgattgc tcgtgagtaa acgttatttt
    14401 gtcaccggaa cggataccga agtggggaaa accgtcgcca gttgtgcact tttacaagcc
    14461 gcgaaggcag taggttatcg gacggcaggt tataaaccgg tcgcctctgg cagcgaaaag
    14521 accccggaag gcttacgtaa tagtgacgcg ctggcgttac agcacaacag cagcctgcaa
    14581 ctggattacg caacggtaaa tccttacacc ttcgcagaac ccacctcgcc gcacatcatc
    14641 agcgcgcaag agggcaggcc gatagaatca ttggtaatga gcgccggatt atgcgcgctt
    14701 gaacaacagg ctgactgggt gttagtggaa ggtgctggcg gctggtttac gccgctttct
    14761 gacactttca cttttgcaga ttgggtaaca caggaacaac tgccggtgat actggtagtt
    14821 ggtgtgaaac tcggctgtat taatcacgcg atgttgactg cgcaggcaat acaacacgcc
    14881 ggactgactc tggcgggttg ggtggcgaac gatgttacgc ctccgggaaa acgtcacgct
    14941 gaatatatga ccacgctcac ccgcatgatt cccgcgccgc tgctgggaga gatcccctgg
    15001 cttgcagaaa atccagaaaa tgcggcaacc ggaaagtaca taaaccttgc cttgttgtag
    15061 ccatcctgta tttggttaaa ttgcgagcga gatcgcgtct tcgattgact gcaatttaac
    15121 caattaaatt ctaaaataat cacgaaaaaa attttacctc cacatcatgc ggtgaatgtg
    15181 ggaattgccc aggcggcggg ggataggggc tggagacagt tatccactat tcctgtggat
    15241 aaccatgtgt attagagtta gaaaacacga ggcaagcgag agaatacgcg gcttgcacgc
    15301 gaattggcgt taaagacggc tcaaagaaat atcttttatt ttttaactgg ttagataatt
    15361 gcaatggcag tcactgaaca ggcatctctt gccataaaac tgtcatcact catcttgaca
    15421 aatgttaaaa aagccgttgc tttggggata acccggtaag gccggagttt tatctcgcca
    15481 cagagtaaat tttgctcatg attgacagcg gagtttacgc tgtatcagaa atattatggc
    15541 gatgaactgt ttttttatcc agtgtaattt gttggcataa ttaagtacga cgagtaaaat
    15601 tacatacctg cccgcccaac tccttcaggt agcgactcat gagtaaaccg ttcaaactga
    15661 attccgcttt taaaccttct ggcgatcagc cagaggcgat tcgacgtctc gaagaggggc
    15721 tggaagatgg cctggcgcac cagacgttac ttggcgtgac tggctccggg aaaaccttca
    15781 ccattgccaa tgtcattgct gaccttcagc gcccaaccat ggtacttgcg cccaacaaaa
    15841 cgctggcggc ccagttgtat ggcgaaatga aagagttctt cccggaaaac gcggtggagt
    15901 atttcgtctc ctactacgac tactatcagc cggaagccta tgtaccgagt tccgacacct
    15961 tcattgagaa agatgcctcg gttaacgaac atattgagca gatgcgtttg tccgccacca
    16021 aagcgatgct ggagcggcgt gatgtgattg tagtggcgtc tgtttccgcg atttatggtc
    16081 tgggcgatcc tgatttatat ctcaagatga tgctccatct cacggtcggt atgattatcg
    16141 atcagcgcgc gattctccgc cgactggcgg agctgcaata cgctcgtaat gatcaagcat
    16201 tccagcgtgg tactttccgc gttcgtggcg aggtgataga tatcttcccg gcagaatcgg
    16261 atgacattgc acttcgcgtg gaactgtttg acgaggaagt ggaacgattg tcgttatttg
    16321 acccgctgac cgggcagatt gtttccacta ttccacgttt taccatctac ccgaaaacgc
    16381 actacgtcac accgcgcgag cgcatcgtac aggcgatgga ggagatcaaa gaagaactgg
    16441 ccgccagacg caaggtgctg ttggaaaaca acaaactgct ggaagagcag cggctgaccc
    16501 agcgtaccca gtttgatctg gagatgatga acgagctggg ctactgttca gggattgaaa
    16561 actactcgcg cttcctctcc ggtcgtggac cgggtgagcc accgccgacg ctgtttgatt
    16621 acctgcctgc cgatgggctg ctggtcgtcg atgaatctca cgtcaccatt ccacaaattg
    16681 gcggcatgta tcgcggtgac cgggcgcgta aagagacact ggtggagtac ggcttccgcc
    16741 tgccatcagc gctggataac cgtccgctta agtttgaaga gttcgaagca ttagcgccgc
    16801 aaaccatcta tgtttcggcg acgccgggta attacgagct ggaaaaatcc ggcggcgatg
    16861 tggtggatca ggtggtgcgt ccaaccggat tgcttgaccc gattatcgaa gtgtggccgg
    16921 tggcgacaca ggttgatgat cttctttcgg agattcgtca gcgagcggca attaacgaac
    16981 gcgtgctggt caccacactg accaagcgaa tggcggaaga tcttaccgaa tatctcgaag
    17041 aacacggtga gcgcgtgcgt tatcttcact cagatatcga caccgtcgag cgtatggaga
    17101 ttatccgcga cttgcgtctg ggtgagttcg acgtattggt agggatcaac ttactgcgtg
    17161 aaggtctgga tatgccggaa gtgtcgctgg tggcgatcct cgacgctgac aaagaaggct
    17221 tcctgcgttc cgaacgttcg ttgatccaga ccattggtcg tgcggcacgt aacgttaacg
    17281 gtaaagcgat tctctacggc gataagatca ccccatcaat ggcgaaagcg attggcgaaa
    17341 ccgaacgtcg ccgcgagaaa cagcagaagt acaacgagga acacggcatt acgccgcaag
    17401 gcttgaacaa gaaagtggtc gatatcctgg cgttggggca gaacattgct aaaaccaaag
    17461 cgaagggcag aggaaaatcg cgaccgattg ttgagccgga taatgtgccg atggatatgt
    17521 cgcctaaagc gttgcagcag aaaatccatg agctggaagg gttgatgatg caacacgcgc
    17581 agaatctgga gttcgaagaa gcggcgcaaa ttcgtgacca gttgcatcag ttgcgtgagt
    17641 tgtttattgc cgcatcgtaa caggatagcg aagaagactg atgacaaacg gaaaacagcc
    17701 tgatgcgcta cgcttatcag gcctacattt tctccgcaat atattgaatt tgcgcggttt
    17761 gtaggccgga taaggcgttc acgccgcatc cggcataaac aacgcgcact ttgtcttcaa
    17821 taggaagccg gaattttcct tcggatttcc gttaacctaa agcctgtaac gccttttcca
    17881 gcgcgttatg taacaactgg cggtcatgac gatacggaat atcgctggcc tccagtacct
    17941 cctggatcac aatccgctct ttcaccgccg agacatccac ttttggcccg acgatgaccg
    18001 catcaatgac ctttttacca acatactgct ccataattgc cagcttgctt tccagcttca
    18061 aattagccgc aggtaaactc aactcacgcc ccagattgcc gatataaacc atcggcgctg
    18121 gcgtgcggcg taatgcctgg gcgatttcct tcagcagccg aattggcatc aggctggtat
    18181 aaaaactgcc aggcccaata atgatgagat ccacttcatt gatagcgtga accgcctcac
    18241 gcgttgcggg tacattaggc gttaacaata actcttgaat cggcgtagtt aactggtcga
    18301 tattgacctc gccgtaaact tcatgcccct gatcgtcaat agccatcaga tcaacaggat
    18361 gctctgacat tggaatcaaa tgcgtatcca ctttcagcag attacgaatt aaattgatgg
    18421 cttccagagg ccgcacgcta aggtgatcca gcgcctttaa catcaagttt ccgagattat
    18481 gaccggaaag ttcgccattg ccgccaaaac ggtattcaaa catcgcggag gcgacgctcg
    18541 gttccgttat cagctggttg aggcagttgc gcatatcgcc ccaggcaatg ccgccttctg
    18601 aacggcgaat acgccccgtc gagccaccat tatccgtggt ggtgacgata cccgttaaac
    18661 gagaacccaa agacgaaagt gatgagagaa cgcgtcccag tccatgccct ccgccgagag
    18721 caacgacacg atcaagatca gccagcgtac gattgcgcat atagtttcct ggagtcagat
    18781 tatccgcgct acagtagcgc aaattgcggg gaaacagcaa ttaacctgcc aatattgagg
    18841 atacaaacta ttttcttcta cctctaaagg acgatgcacg ctatgcctcc ctgatgatgt
    18901 atatcaaagt aaaaccgcca ttttccctta ttctgtagcg aaatagcacg atcatgacgc
    18961 tatatacatg attacatagc gaaagtgtgg atggtaaaaa tctcatttac acgctagtat
    19021 cggcttaacc actaaacact ctagcctctg tacctgggtc aactgatacg gtgctttggc
    19081 cgtgacaatg ctcgtaaaga ttgccaccag ggcgaaggaa gaaatgactt cgcctcccgt
    19141 atctggaaag gtgtacatgg cttcacaact gactgatgca tttgcgcgta agttttacta
    19201 cttgcgcctg tcgattaccg atgtgtgtaa ctttcgttgc acctactgcc tgccggatgg
    19261 ctacaaaccg agcggcgtca ccaataaagg ctttcttacc gtcgatgaaa ttcgccgggt
    19321 tacgcgcgcc ttcgccagtc tgggcaccga aaaagtgcgc ctgacaggag gagagccgtc
    19381 tttacgccgc gactttaccg atatcatcgc cgctgtgcgg gaaaacgacg ctatccgcca
    19441 gattgcggtc accaccaatg gttaccgtct ggaacgcgat gtggcgaact ggcgcgatgc
    19501 gggacttact ggcattaacg tcagtgtcga cagtttggac gcccgccagt ttcacgctat
    19561 taccgggcag gataaattca accaggtcat ggcagggatt gatgctgcat ttgaggccgg
    19621 ttttgagaag gtcaaagtca ataccgtgct gatgcgtgat gttaatcatc accagctcga
    19681 cacctttctg aactggatcc agcatcgccc tatccagctg cgtttcatcg aactgatgga
    19741 aacgggcgag ggcagcgagc tcttccgtaa gcatcacatc tctggtcagg ttctgcgtga
    19801 cgagctactg cgtcgcggct ggatccacca attacgtcaa cgcagcgacg gtcccgcgca
    19861 agtcttttgc catccagatt acgccggaga gattggcctt atcatgccgt atgaaaaaga
    19921 cttctgcgcc acttgcaacc gcctgcgcgt ttcctccatt ggtaaactcc atctctgcct
    19981 gtttggtgaa ggcggcgtta acctgcgcga tctgctggaa gacgataccc agcaacaggc
    20041 gctggaagcg cgtatttcag cggcgctgcg ggagaagaaa cagacccatt tcctgcatca
    20101 aaacaacacc ggtattacgc aaaacttatc gtacattggc ggctaaaacg tcaaaaggag
    20161 agatcagatg agtcaggtaa gcactgaatt tatcccgacc cgtattgcta ttcttacggt
    20221 ttctaatcgt cgcggtgaag aagacgatac ctccggtcac tatctgcgcg attcggcgca
    20281 agaagcgggc catcacgttg tcgataaagc cattgtgaaa gaaaaccgct acgctattcg
    20341 cgctcaggta tctgcgtgga tcgccagcga cgatgtacaa gtggtattga ttacgggtgg
    20401 tactggcctg acggaaggtg atcaggctcc cgaagcattg ctgccgttgt tcgaccgtga
    20461 agttgaaggt tttggtgaag tgttccgtat gttgtcgttt gaagagattg gcacttccac
    20521 gttgcaatct cgtgcggtag cgggcgtcgc taacaaaacg ctgattttcg ccatgccggg
    20581 ttcgaccaaa gcgtgccgta ccgcatggga aaatatcatc gcgccgcagc tggatgcccg
    20641 tacgcgtccg tgtaatttcc atccacattt gaagaaataa gtatgtcgca actgacccat
    20701 atcaacgccg ctggcgaagc gcacatggtg gatgtctccg ccaaagcgga aaccgtgcgt
    20761 gaagcgcgcg ccgaagcctt tgtcaccatg cgcagcgaga cgctggcgat gattattgat
    20821 ggtcgccacc acaaaggcga cgtatttgcc actgcgcgta tcgccggtat tcaggcggca
    20881 aaacgcacct gggatctgat cccgctgtgt cacccgctga tgcttagcaa agttgaagtc
    20941 aatttacagg ccgagccgga gcacaatcgg gtacgtatag aaaccttatg ccgcctgacc
    21001 gggaaaaccg gtgtcgaaat ggaagcgtta accgcggcct ccgtggcggc gctgaccatt
    21061 tatgacatgt gcaaagcggt gcaaaaagat atggtgattg gtccggtacg tttgttggca
    21121 aagagcggcg gcaagtcggg tgactttaag gtggaagcgg atgattaaag ttcttttttt
    21181 cgcccaggtg cgcgagttgg tgggaacaga tgcaaccgaa gtggctgcgg attacccaac
    21241 cgttgaagcg ttacgccagc acctggctgc gcagagcgaa cgctgggcgc tggcgctgga
    21301 agatggcaaa ttgctggctg ccgtcaacca gacgctggtg agttttgacc atccgctgac
    21361 tgacggcgac gaagtagctt tcttcccgcc ggtaaccgga ggttaagatg gcagaaacca
    21421 aaattgttgt cggcccgcag ccgttcagcg taggagaaga gtacccgtgg ctggcggagc
    21481 gtgacgaaga cggtgcggta gtcaccttca ccggaaaggt gcgcaaccat aacctgggcg
    21541 acagcgtcaa agcattaacc ctcgaacact atccggggat gactgaaaaa gcactggcag
    21601 aaattgttga tgaagcgcgt aaccgctggc cgctggggcg cgtcacggtg attcaccgca
    21661 tcggggaatt atggccgggc gatgaaatcg tttttgtcgg tgtcaccagt gcgcatcgca
    21721 gcagtgcgtt tgaagccggg cagtttatta tggattatct caaaacccgc gcaccgttct
    21781 ggaagcgcga agccacgccg gaaggcgacc gctgggttga agctcgggag agcgatcagc
    21841 aggcggcaaa acgctggtag ttttttgtta gccggataag gcaccgctgc gtccggcaat
    21901 ttcaccgctc agtacatgcg tttacgctgc gtcgatgcac agcctcatca ttttgcagta
    21961 tccttaagat attccttata tcttcaggag atcgtcatgg acagattccc acgttctgat
    22021 tcaatcgtac aaccccgggc tggcttgcaa acttatatgg cgcaagtcta tggctggatg
    22081 accgttggct tgttgctgac cgcatttgtt gcctggtatg cggctaattc cgcggccgtg
    22141 atggagctgt tgttcactaa ccgtgtcttt ttaatcggtc tgatcatcgc gcaattagca
    22201 ttggttattg tgttatcagc gatgattcaa aagctgagcg caggtgtaac gacgatgctc
    22261 tttatgcttt attcggtgct gacgggtctt acgctttcca gtatattcat tgtctatacc
    22321 gctgcttcta tcgccagtac tttcgtcgtt actgccggga tgttcggcgc aatgagcctg
    22381 tacggttaca ccacgaagcg cgatttaagt ggctttggca atatgctgtt tatggcgtta
    22441 atcggcattg tgctggcatc gctggtcaac ttctggctga aaagcgaagc attgatgtgg
    22501 gcagttacct acatcggcgt gattgtcttt gtcggattga cggcgtatga cactcagaaa
    22561 ttgaaaaata tgggtgagca gattgatacc cgcgacacgt cgaacctgcg caaatattcc
    22621 attcttggcg cgttaacctt gtatctggac ttcatcaacc tgttcctgat gttgttacgg
    22681 atcttcggca accgccgtta atttcactat cccggccatg tgtcgggatt tttttcttac
    22741 taaaaacgac acttaacaag taccaggtat aaaatatgcc ttatgagcga gcggaatcgt
    22801 tttccgtatc cataaataca aaagtatttt gtatgcgtgg ttttaaattt attgatggtg
    22861 aatattaata ttttctctaa ggacaactaa aagaatggaa tcatactcac aaaacagcaa
    22921 taaattagat tttcagcacg aagccaggat attaaacagc atatggctca ttaccgcttt
    22981 aggtttggtg gcaacagcag gactggcctg gggagctaag tatctcgaaa ttacggcaac
    23041 caaatatgat tcaccaacaa tgtatgtcgc tatagggtta ttattagttt gtatgtatga
    23101 cttaagtaag gatatcaaca agataaatgc cgtcatcgca ggcgtaatat atctgttttt
    23161 actctctttg gtggcgattg tcg
//
LOCUS       DAJVTL010000062        23058 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.062, whole genome shotgun sequence.
ACCESSION   DAJVTL010000062 DAJVTL010000000
VERSION     DAJVTL010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23058
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.062"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            180..1112
                     /gene="rfaD"
                     /locus_tag="OQQ26_002336"
     CDS             180..1112
                     /gene="rfaD"
                     /locus_tag="OQQ26_002336"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HCS1857773.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
                     QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            1122..2168
                     /gene="rfaF"
                     /locus_tag="OQQ26_002337"
     CDS             1122..2168
                     /gene="rfaF"
                     /locus_tag="OQQ26_002337"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HCS1857774.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEISERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
                     PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYIALAYDKGIMRTAQDLPQPLLWPQL
                     QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
                     FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
                     AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDTAEGYHQSLIDITPQR
                     VLEELNALLLQEEA"
     gene            2172..3164
                     /gene="rfaC"
                     /locus_tag="OQQ26_002338"
     CDS             2172..3164
                     /gene="rfaC"
                     /locus_tag="OQQ26_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HCS1857775.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPEIKFDWVVEEGFAQI
                     PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAAL
                     VTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
                     GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWG
                     APHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TVYGPTDPGLIGGYGKNQVECRSTSMSLADLPAQTVFQNLNLEIITNKLTSEIR"
     gene            3161..4369
                     /gene="rfaL"
                     /locus_tag="OQQ26_002339"
     CDS             3161..4369
                     /gene="rfaL"
                     /locus_tag="OQQ26_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase RfaL"
                     /protein_id="HCS1857776.1"
                     /translation="MTSTLFFSLEKKNWIAYWNRALVFLFITTYFLGGITRYKHLIVI
                     LMTITTIVYLCKRPKHYLSLFKTFLFGSVAILTIAALLSLLQSPDAGASMKEIFKAII
                     ENTLLCTIAIPVILRDEKREDVEKIVFFSFISALGLRCFSELITYYKDYQQGIMPFAD
                     YRHRSISDSMVFLFPALLNLWLIKPAKYRISFVVLSVIFIFLILGTLSRGAWLSVLAI
                     GLIWILMFKQWKLLLVGVMVSIIALSVIFTHKEMTAKLTYKLQQTNSSYRYANGTQGS
                     ALDLILENPVIGYGYGNVAYKDVYNKRVVDYPEWTFRQSIGPHNFALFIWFGTGLLGL
                     VSLMMLYCAILKECIKNGVQNKYRSPYNAYYIILLSFIGYFVIRGNVEQIEPNLLGVY
                     AGLLLAMKNK"
     gene            complement(4405..5547)
                     /locus_tag="OQQ26_002340"
     CDS             complement(4405..5547)
                     /locus_tag="OQQ26_002340"
                     /EC_number="2.4.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylglucosaminyltransferase"
                     /protein_id="HCS1857777.1"
                     /translation="MVDKIIFTVTPIFSIPPRGAAAVETWMYQVAQRTNFPNRIVCIK
                     NPGYSNYTFVNDNCSIHRVGFSRIYKRLFQKWTRLDPLPYSQRILNIAHDFPITKESV
                     IVVHNSMKLYTQIRKRAPQARVVIHMHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLAN
                     ADIEIVPNGIDLETYQSNFQPITRSELNISPEEKIIFYAGRIVPDKGILLLMQSFEKL
                     AAAHKNLKLVVIGDYTEMSKSDKGAYQRNVREIAKRLKDRCIMLGSIPPEKMHCYYPL
                     ADLVVIPSQFQEPFCMVAIEAMGAGKPVLVSTRGGMTEFVKENTTGFHLNEPMTADSI
                     SSDILKTLANPELTAVAKQGQDFVFDHYSWDGVTQRFEEVIHNWFE"
     gene            complement(5556..6569)
                     /locus_tag="OQQ26_002341"
     CDS             complement(5556..6569)
                     /locus_tag="OQQ26_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose--(galactosyl) LPS
                     alpha1,2-glucosyltransferase"
                     /protein_id="HCS1857778.1"
                     /translation="MDFKHITQFKDIIELDKRPVKLDERETFNVSWGIDENYQVGAAI
                     SIASILENNKQNKFTFHIIADYLDKEYIELLSQLATKYQTVIKLYHIDSEPLKALPQS
                     NIWPVSIYYRLLSFDYFSARLDSLLYLDADIVCKGSLNELIALEFKDEYGAVVIDVDA
                     MQSKSAERLCNEDFNGSYFNSGVMYINLREWLKQRLTEKFFDLLSDESIIKKLKYPDQ
                     DILNLMFLHHAKILPRKYNCIYTIKSEFEEKNSEYYTRFINDDTVFIHYTGITKPWHD
                     WANYASADYFRNIYNISPWRNIPYKKAVKKHEYKEKYKHLLYQKKFLEGVFTAIKYNV
                     MKG"
     gene            complement(6594..7299)
                     /gene="rfaY"
                     /locus_tag="OQQ26_002342"
                     /pseudo
     CDS             complement(6594..7299)
                     /gene="rfaY"
                     /locus_tag="OQQ26_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709405.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
     gene            complement(7325..8332)
                     /gene="waaO"
                     /locus_tag="OQQ26_002343"
                     /gene_synonym="rfaI"
     CDS             complement(7325..8332)
                     /gene="waaO"
                     /locus_tag="OQQ26_002343"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001521942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HCS1857779.1"
                     /translation="MSQLNDSDIILFEYNFHYQNIRSKNTLDIAFGIDRNFLFGCGVA
                     IASILLNNREISCEFHVFTDYISDKDKLYFSDLAKQYNSRINIYVINGDKLKSLPSTK
                     NWTYATYFRFIIADYFYHKHEKILYLDADIACKGSIKELLDYQFSTNEIAAVVAERDV
                     EWWQNRASVLTTPLLASGYFNAGFLLINIDEWNLNNISSKAIEMLRDPDWVSKITHLD
                     QDVLNVLLNGKVKFISEKYNTRYSINYELKDKVDNPVNDDTVFIHYVGPTKPWHEWAD
                     YPVSRSFLIAKAASPWSKEDLLKPVNSNQYRYCAKHKFKQKHYMAGIFNYLKYYKEKC
                     F"
     gene            complement(8375..9172)
                     /gene="rfaP"
                     /locus_tag="OQQ26_002344"
     CDS             complement(8375..9172)
                     /gene="rfaP"
                     /locus_tag="OQQ26_002344"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HCS1857780.1"
                     /translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
                     KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWNAIHQLRDVGVDTMYGVAFGEKGM
                     NPLTRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
                     RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
                     TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
     gene            complement(9165..10289)
                     /locus_tag="OQQ26_002345"
     CDS             complement(9165..10289)
                     /locus_tag="OQQ26_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HCS1857781.1"
                     /translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
                     CPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYRLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
                     ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVAELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAPYIVEANCGEAIAEPFRQETLNEILRKA
                     LTQSSLRQAWAENARHYADTQDLYSLPKKAADIITGGLDG"
     gene            complement(10286..11344)
                     /gene="rfaQ"
                     /locus_tag="OQQ26_002346"
     CDS             complement(10286..11344)
                     /gene="rfaQ"
                     /locus_tag="OQQ26_002346"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HCS1857782.1"
                     /translation="MDKPFRRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ
                     DTIPILSENPEINALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAI
                     LVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLGLDSLVKQT
                     TMSYPPASWKRMRRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEV
                     VLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHI
                     AAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSVIPAAD
                     VIAAVDKLLPSSTTGTSL"
     gene            11757..13034
                     /gene="waaA"
                     /locus_tag="OQQ26_002347"
     CDS             11757..13034
                     /gene="waaA"
                     /locus_tag="OQQ26_002347"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HCS1857783.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
                     HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
                     AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            13042..13521
                     /gene="coaD"
                     /locus_tag="OQQ26_002348"
     CDS             13042..13521
                     /gene="coaD"
                     /locus_tag="OQQ26_002348"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HCS1857784.1"
                     /translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
                     MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
                     AHMNRHLMPELESVFLMPPKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
     gene            complement(13560..14369)
                     /gene="mutM"
                     /locus_tag="OQQ26_002349"
     CDS             complement(13560..14369)
                     /gene="mutM"
                     /locus_tag="OQQ26_002349"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HCS1857785.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
                     SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
     gene            complement(14467..14634)
                     /gene="rpmG"
                     /locus_tag="OQQ26_002350"
     CDS             complement(14467..14634)
                     /gene="rpmG"
                     /locus_tag="OQQ26_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HCS1857786.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            complement(14655..14891)
                     /gene="rpmB"
                     /locus_tag="OQQ26_002351"
     CDS             complement(14655..14891)
                     /gene="rpmB"
                     /locus_tag="OQQ26_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HCS1857787.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY"
     gene            complement(15108..15776)
                     /gene="radC"
                     /locus_tag="OQQ26_002352"
     CDS             complement(15108..15776)
                     /gene="radC"
                     /locus_tag="OQQ26_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HCS1857788.1"
                     /translation="MKNNAQLLMPREKMLKFGLSALTDVELLALFLRTGTRGKDVLTL
                     AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL
                     SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAI
                     KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE
                     RGWI"
     gene            15948..17168
                     /gene="coaBC"
                     /locus_tag="OQQ26_002353"
     CDS             15948..17168
                     /gene="coaBC"
                     /locus_tag="OQQ26_002353"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HCS1857789.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGD
                     IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
                     VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDYRPYVVGFAAETNNV
                     KEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLSLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            17146..17604
                     /gene="dut"
                     /locus_tag="OQQ26_002354"
     CDS             17146..17604
                     /gene="dut"
                     /locus_tag="OQQ26_002354"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HCS1857790.1"
                     /translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
                     PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
                     NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
     gene            17711..18307
                     /gene="slmA"
                     /locus_tag="OQQ26_002355"
     CDS             17711..18307
                     /gene="slmA"
                     /locus_tag="OQQ26_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HCS1857791.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
                     QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(18344..18985)
                     /gene="pyrE"
                     /locus_tag="OQQ26_002356"
     CDS             complement(18344..18985)
                     /gene="pyrE"
                     /locus_tag="OQQ26_002356"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HCS1857792.1"
                     /translation="MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHYDLDLPYCFNRKEA
                     KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
                     RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYHEEFGV"
     gene            complement(19051..19767)
                     /gene="rph"
                     /locus_tag="OQQ26_002357"
     CDS             complement(19051..19767)
                     /gene="rph"
                     /locus_tag="OQQ26_002357"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HCS1857793.1"
                     /translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
                     AVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
                     ALARGGIESIVATQKAALAN"
     gene            19894..20757
                     /locus_tag="OQQ26_002358"
     CDS             19894..20757
                     /locus_tag="OQQ26_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HCS1857794.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRSRLTRGKVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIATEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            20978..21802
                     /gene="dinD"
                     /locus_tag="OQQ26_002359"
     CDS             20978..21802
                     /gene="dinD"
                     /locus_tag="OQQ26_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HCS1857795.1"
                     /translation="MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLA
                     RATQACEASNQAASDHFVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVI
                     AAGQTYFAIQTRRQELADDEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAI
                     DFAIFQNHGYRGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLK
                     RDGVNSKQQANTTHFDVGSKVRQTIQELGGTMPEELQTPQVSINQLENSVKITEKK"
     gene            22094..22711
                     /locus_tag="OQQ26_002360"
     CDS             22094..22711
                     /locus_tag="OQQ26_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HCS1857796.1"
                     /translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
                     IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
                     IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
     gene            complement(22708..>23058)
                     /gene="ligB"
                     /locus_tag="OQQ26_002361"
                     /gene_synonym="yicF"
     CDS             complement(22708..>23058)
                     /gene="ligB"
                     /locus_tag="OQQ26_002361"
                     /gene_synonym="yicF"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418104.2"
                     /note="this ligase is similar to LigA but it lacks the
                     C-terminal BRCT domain; catalyzes strand joining of nicked
                     DNA in the presence of a divalent cation and NAD+; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HCS1857797.1"
                     /translation="FEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRW
                     VMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKL
                     GSWLAAQQITGFEP"
BASE COUNT         6090 a         5564 c         5208 g         6196 t
ORIGIN      
        1 ctattcacat gcaaaaccaa catccgccat gaaggactag ctaaaaccca aactagtttg
       61 ttgcaattag catccttgca cctctatgta aagggctgaa gggattcgga tgtgatggta
      121 tgattacaga cattcgtgtc tgagattgtc tctgactcca taattcgaag gttacagtta
      181 tgatcatcgt taccggcggc gcgggcttta tcggcagcaa catcgttaaa gccctgaatg
      241 ataaaggcat caccgatatt ctggtggtgg acaacctgaa agacggcacc aagtttgtga
      301 acctggtgga tctgaatatc gcagactata tggataagga agacttcctg atccagatta
      361 tggctggcga agagttcggc gatgtcgaag cgattttcca cgaaggcgcg tgctcttcca
      421 ccaccgagtg ggacggcaag tatatgatgg ataacaacta tcaatactcc aaggagctgc
      481 tgcactactg cctggagcgt gaaatcccgt tcctgtacgc ttcttccgca gccacctacg
      541 gcggacgcac ctccgacttt attgaatccc gcgagtacga aaaaccgttg aacgtctacg
      601 gttactcaaa attcctgttt gatgaatatg ttcgccaaat cctgccggaa gcgaactcgc
      661 agattgttgg cttccgctat ttcaacgttt atggaccgcg tgaaggccat aaaggcagca
      721 tggcgagcgt cgctttccat ctcaacaccc agcttaataa cggtgaatca ccgaagctgt
      781 tcgaaggtag cgagaacttt aaacgcgact tcgtctatgt tggcgacgtg gcagatgtaa
      841 acctgtggtt cctggaaaat ggcgtttccg gcatcttcaa cctcggcacc ggtcgtgcgg
      901 aatccttcca ggctgtagct gatgctacgc tggcttatca caagaaaggc cagatcgaat
      961 acattccgtt cccggataag ctgaaaggcc gctaccaggc gttcactcag gcagatctga
     1021 caaatctgcg cgcggcgggt tacgacaaac cgttcaaaac cgttgctgaa ggtgtaacgg
     1081 aatacatggc ctggctgaat cgcgacgcat aagagctctg catgaaaata ctggtgatcg
     1141 gcccgtcttg ggttggcgac atgatgatgt cgcaaagtct ctatcgcacg ctccaggcgc
     1201 gctatcccca ggcgataatc gatgtgatgg caccggcatg gtgccgtcca ttattatcgc
     1261 ggatgccgga agttaacgaa gctattccta tgcctctcgg tcacggagcg ctggaaatca
     1321 gcgaacgccg caaactgggt catagtctgc gtgaaaagcg ctacgaccgc gcctacgtct
     1381 tacctaactc cttcaaatcc gcattagtgc ctttcttcgc gggtattcct catcgcaccg
     1441 gctggcgcgg cgagatgcgc tacggtttac tcaacgatgt acgcgtgctc gataaagaag
     1501 cctggccgct aatggtggaa cgctatatag cgctggccta tgacaaaggc attatgcgca
     1561 cagcacaaga tctgccgcag ccattgttat ggccgcagtt gcaggtgagc gaaggtgaaa
     1621 aatcatatac ctgtaatcaa ttttcgcttt catcagaacg tccgatgatt ggtttttgcc
     1681 cgggtgcgga gtttggtccg gcaaaacgct ggccacacta ccactatgcg gagctggcaa
     1741 agcagctgat tgatgaaggt tatcaggtgg ttctgtttgg ctcggcgaaa gatcatgaag
     1801 caggcaatga gattcttgcc gctttgaata ccgagcagca ggcatggtgt cggaacctgg
     1861 cgggggaaac acagcttgat caagcggtta tcctgattgc agcctgtaaa gccattgtca
     1921 ctaacgattc tggcctgatg cacgttgcgg cggcgctcaa tcgtccgctg gttgccctgt
     1981 atggtccgag tagcccggac ttcacaccgc cgctatccca taaagcgcgc gtgatccgcc
     2041 tgattaccgg ctatcacaaa gtgcgtaaag gtgacactgc ggagggttat caccagagct
     2101 tgatcgacat tactccccag cgcgtactgg aagaactcaa cgcgctattg ttacaagagg
     2161 aagcctgacg gatgcgggtt ttgatcgtta aaacatcgtc gatgggcgat gttctccata
     2221 cgttgcccgc actcactgat gcccagcagg caatcccaga aattaagttt gactgggtgg
     2281 tggaagaagg gttcgcacag attccttcct ggcacgctgc cgttgagcga gttattcctg
     2341 tggcaatacg tcgctggcgt aaagcctggt tctcggcccc tataaaagct gaacgcaaag
     2401 cgtttcgtga agcgctacaa gcagagaact atgacgcagt tatcgacgct caggggctgg
     2461 taaaaagcgc ggcgctggtg acgcgtctgg cgcatggcgt aaagcatggc atggactggc
     2521 aaaccgctcg cgaaccttta gccagcctgt tttacaatcg taagcatcat attgcaaaac
     2581 agcagcacgc cgtagaacgc acccgcgaac tgtttgccaa aagtttgggc tatagcaaac
     2641 cgcaaaccca gggcgattat gctatcgcac agcattttct gacgaacctg cctacagatg
     2701 ctggcgaata tgccgtattt cttcatgcga cgacccgtga tgataaacac tggccggaag
     2761 aacactggcg agaattgatt ggtttactgg ctgattcagg aatacggatt aaacttccgt
     2821 ggggcgcgcc gcatgaggaa gaacgggcga aacgactggc ggaaggattt gcttatgttg
     2881 aagtattgcc gaagatgagt ctggaaggcg ttgcccgcgt gctggccggg gctaaatttg
     2941 tagtgtcggt ggatacgggg ttaagccatt taacggcggc actggataga cccaatatca
     3001 cggtttatgg accaaccgat ccgggattaa ttggtgggta tgggaagaat caagtagagt
     3061 gtcgttctac aagtatgtct cttgcagatt tgccagctca aaccgttttt caaaatttaa
     3121 atcttgaaat aataaccaat aagttgacat cggagataag atgacctcaa cattattttt
     3181 ctctctcgag aaaaaaaact ggatagcgta ctggaacaga gctctcgtat tcttattcat
     3241 taccacctat tttttgggtg ggattacaag gtataaacat cttattgtta ttcttatgac
     3301 aataacgaca atcgtctatc tctgcaaacg gccaaaacac tatctctcac tatttaaaac
     3361 atttcttttt ggtagtgttg ccatattaac tattgctgca ttgctgtcac ttcttcaatc
     3421 ccctgatgca ggtgctagca tgaaggaaat tttcaaagct attattgaga atactttact
     3481 atgcacaata gcaataccgg tcatattgag agacgagaaa agagaagatg tcgaaaaaat
     3541 cgttttcttc tcatttatta gtgcgttggg cttacgctgt ttttctgaat tgattaccta
     3601 ttataaggac tatcaacaag ggataatgcc attcgcagat tatagacacc gtagcatttc
     3661 tgactcgatg gtctttttat tccctgcatt gttaaatctc tggcttatca aaccagcaaa
     3721 ataccgcatt tcttttgtgg ttctaagcgt tatttttatt tttctgatat taggaacttt
     3781 atccaggggg gcctggcttt ccgtgttagc cattggatta atatggattc tgatgtttaa
     3841 acaatggaag ttactattag taggagtaat ggtttccatc atcgcattgt cggttatttt
     3901 cacacataag gagatgaccg caaagctaac gtataaactt caacaaacta atagttctta
     3961 tcgctatgca aatggtactc aaggcagcgc actcgatcta atattagaaa atcctgttat
     4021 tggttatggt tacggtaacg ttgcatataa agatgtctat aataaacgtg tcgttgatta
     4081 tccagaatgg acctttagac aatcaatagg gccacataat tttgcgctat tcatctggtt
     4141 tggcactggt ttattagggc tggtaagtct tatgatgcta tactgtgcaa tattgaaaga
     4201 gtgtataaaa aatggcgtcc agaataaata ccgctcacca tataatgcat attatataat
     4261 cttactatct tttataggtt attttgttat ccgtggaaac gtagaacaaa ttgaaccaaa
     4321 tttattaggc gtttacgccg gcttattatt agcgatgaaa aacaagtaaa aaataaaaaa
     4381 ggctgcataa tgcggccttt ttatttattc aaaccaatta tgaataacct cttcgaatct
     4441 ttgagttacg ccatcccaac tgtagtgatc aaacacaaag tcctgacctt gctttgcaac
     4501 tgctgttaat tcaggattcg ctaacgtttt taaaatatcg ctgcttatgg agtctgcagt
     4561 cataggttcg tttaaatgga atcccgtagt attttctttg acaaattccg tcatcccccc
     4621 acgcgtactc actaaaacag gcttaccagc acccatagct tcaattgcca ccatgcaaaa
     4681 tggttcctgg aactgggaag gaatgacgac taaatctgcc agtgggtaat aacaatgcat
     4741 cttttcaggc ggtatgcttc ctaacataat gcaacgatcc ttcaaacgtt ttgcaatttc
     4801 cctgacattg cgttgatatg cacctttgtc acttttactc atttctgtat aatcaccaat
     4861 cacaactaat tttaaatttt tgtgagcagc ggccaatttt tcgaatgatt gcatcaacag
     4921 caatatgcct ttgtcaggga cgatacgccc agcataaaaa ataattttct cttcagggga
     4981 gatattaagt tcgcttctag tgatcggctg aaaattagat tgataggttt ctaaatcaat
     5041 tccatttggt acaatctcaa tatctgcatt tgctaaataa gattggtaat actttttcaa
     5101 gtataaacta ggcactatca ttttaacatt ttgctcaagc aattttggtt caaatgcatt
     5161 atgcatatgt ataaccactc ttgcctgagg agctcgctta cgaatttgag tgtatagctt
     5221 catgctatta tgaactacaa taacactttc tttcgttata ggaaaatcat gtgcaatatt
     5281 caatattctc tgtgaatatg gaagaggatc aagtcttgtc catttttgaa ataaccgctt
     5341 atatatgcga ctgaatccaa ccctatgaat actacaatta tcattaacaa aggtgtaatt
     5401 tgagtatcct ggatttttga tacaaacaat acgatttgga aaattggtac gctgagcaac
     5461 ctgatacatc cacgtttcaa cagcagccgc tccgcgagga ggaattgaaa aaataggagt
     5521 aaccgtaaat attattttat caaccatctc gtatattaac ctttcataac attatattta
     5581 attgctgtaa aaacaccttc gagaaatttt ttctggtaaa gcaagtgttt atatttttct
     5641 ttgtactcat gttttttaac agctttttta taaggtatat ttctccatgg tgatatatta
     5701 taaatattac gaaaataatc tgcagatgcg tagttcgccc aatcatgcca tggcttagtt
     5761 ataccagtat aatgtatgaa gacagtgtca tcattaataa accgggtgta atattcacta
     5821 tttttttctt caaattctga ctttatagta taaatacaat tatattttct cggtaatatt
     5881 ttagcatgat gtagaaacat taagtttaaa atatcttgat ccgggtactt taattttttt
     5941 ataattgact catctgataa tagatcaaag aatttttccg ttagtctttg ttttaaccat
     6001 tcccgtaaat taatatacat tacaccagag ttaaaatagc taccgttaaa atcctcatta
     6061 cacaaacgct cagcgctttt actttgcata gcatctacat caattaccac tgccccatat
     6121 tcatctttaa actctaatgc tattaactcg ttcaatgacc ccttacagac gatatcagca
     6181 tcaagatata ataatgaatc caatcgcgca gaaaaataat caaatgaaag caaacgataa
     6241 taaatagata ctggccagat atttgattga ggtagcgcct tcaatggctc agaatcaata
     6301 tgatataatt taattactgt ttgatacttc gttgctaatt gtgataataa ttcaatatac
     6361 tctttgtcta agtaatcagc gattatgtga aaggtaaatt tgttttgttt attattttca
     6421 agaattgaag caattgaaat cgcagcccca acctggtagt tctcatcaat accccatgag
     6481 acattaaacg tttcccgttc atcaagttta acggggcgct tgtccagttc aattatatct
     6541 ttaaattgag taatatgttt aaaatccaat ttaattaccc ttcatcataa tcattatttg
     6601 ctcttcaatc ctagtttgac ttttacatcc ctgattactt ttttaatttt ctttttgaat
     6661 ataagatatg tatagccaaa gtctttcaat tcattttata ttatagtgcc gttcaagatc
     6721 aatgcgatct tttgctttta aaacagcggt tgttttttta cctgaaaggt caattagtct
     6781 taaacctttt tcggatacta taaaatttcc tttatgagga tcgccagaca ccattccatg
     6841 ctgatgcaac tcttttatcg attctgataa ttgatccttc agatcttcag aaatttccaa
     6901 atactcattt aacccgacac cttcaatata ctcaatgagc ataatataat aatgagcgaa
     6961 atttaatgtt ttacgttcag ctagcaaaaa atagtcatta attgattgga tgccttcacc
     7021 acgtacccga tcggtttgat aaattaaatt ttcataataa tcttttttta tgcaagattt
     7081 taagaaacgt tcggtcattt tatgctttgg cgcataaact ttaagtacaa gaggtccacg
     7141 agcagtgtca ataagaatga ctttagtatc atcaatagaa cgaaaaactt ttaatgtttt
     7201 aaccctgcaa gttaaaaagt catttagaac ttgctcataa aagggatcat tatcttttat
     7261 gaaaactttc aacccattta tcgttttatt atatatcata atgaattatt ttaaccttaa
     7321 atctttagaa gcatttttct ttataatact ttaaataatt aaaaatgcct gccatataat
     7381 gcttttgttt aaatttatgt tttgcacaat accgatactg attgctattt acaggtttaa
     7441 gtaaatcttc tttactccac ggagaagctg ctttggcgat caaaaaacta cgtgaaaccg
     7501 gataatcagc ccactcatgc cagggttttg taggtcccac atagtgtata aacacggtgt
     7561 catcattgac tggattatca actttgtctt ttaattcata gttaatacta tatcgggtat
     7621 tatatttctc cgaaataaac ttcactttac cattcaataa tacattcagt acatcttgat
     7681 caaggtgggt gattttactt acccaatctg ggtcacgcaa catttcaata gcttttgacg
     7741 aaatgttatt tagattccac tcatcaatat ttatcagtaa aaaaccagca ttgaaatatc
     7801 cagaagctaa cagtggtgta gttaataccg aggctcgatt ttgccaccat tcaacatctc
     7861 tttcagctac aactgcggca atttcattag tagaaaattg ataatctaag agttctttaa
     7921 tactaccctt gcaagcaata tctgcatcaa gatatagtat tttttcatgt ttatgataga
     7981 aataatctgc aattataaat cgaaaatatg ttgcgtaagt ccagtttttc gtgcttggta
     8041 atgacttcag cttatcacca ttgataacat aaatattaat tcttgaatta tattgttttg
     8101 ctaaatcaga aaaatataat ttgtctttat cactgatata atctgtgaaa acatgaaatt
     8161 cacaagagat ttctctattg tttaatagaa tagatgcgat ggctacacca catccaaaaa
     8221 gaaaatttct gtcaatacca aatgctatat caagagtatt tttagatctt atattttgat
     8281 aatgaaaatt atactcaaaa aggatgatgt cactatcatt gagttgagac atatttattc
     8341 tgtatccaaa attttggcaa aaataagtta cgggttacaa cgattttcga atcgttcttt
     8401 ccctgatttt tgtggctttt gcttctgctt gcgacagcag tccttgttcc tgcttgagaa
     8461 tgtctttaag cggagcggca aaatacacct tcataaaccg ccagatatcc cgctgagtca
     8521 ggccaatatt catcgaagaa aaataaagtc caataagatc tttatcgcgc caacgacgtg
     8581 gaacgcgcgt gcgaagctgc gcccggtgta ggtcaattac cgaaattttt aactcctctt
     8641 ccttaccgga aaaaggcaag tgcagcagga aatgacagat ataacagtca cggtggttaa
     8701 tgcccgcagc atgcatatcg cgcaccatcg tcgcgacacg cttaataagc atacgcttta
     8761 cgcgaacatc tggtgggttg gtcgcccagt cagcacagta atcttccaga ctgatggttg
     8821 gtgtcagatc ttcggtaata ataaacgagg ttctggtcag cggattcatg cctttttcgc
     8881 cgaatgccac cccatacata gtatcaacgc cgacatcccg cagttgatga atcgcattcc
     8941 attcgcggtc tgcgcctaat actggcatcc gcaatgagag taaatttttg attatctctt
     9001 tcagggtcgt gccgcgatgc catttgagaa aatagctttt gcccgccatt tcaaagcgca
     9061 gagtgcggcg agtttccagt tcacgaaata cctcaccctg caaggtttta acttcctcaa
     9121 aaggatcttt accgcgccat aacgtggcaa acggctcttt aagttcaacc atccagacca
     9181 cccgttatga tatccgccgc tttctttggc agactgtata aatcttgtgt atcagcataa
     9241 tgtcgcgcat tttccgccca agcctggcgc aatgaagatt gcgttaacgc tttgcgtaaa
     9301 atctcattca atgtttcctg gcggaatggc tcagcaatag cctcgccgca attggcctcg
     9361 acaatataag gcgcatagcc acaaacggct gttgttagta ccggtaatcc tgcagtaatc
     9421 gcttccagca gcacaattcc cgccgcttcc tggtaggcag gatgcagtaa taaatccgcc
     9481 gccgccatta attccgcgac atcgttgcgc cccgagaaga agtgaacatt actgcgcacg
     9541 ccgcgttttt ctgccagcgc ctcaaatttt cgcggtttat cctgcccaac aacatatagc
     9601 aatgtgttgt ggcgcagcga atccggtaac gaagcaagtg cttcaatgga acgatcgaca
     9661 cctttacgcg tgaagtctga accgacctgc aacaataaat attgctgttc ggttattcca
     9721 ttcttcttac ggaagatttc acggctattg gctggctgct ggctatattt acgatcagga
     9781 taaatccccg gtggcagaat atgaaaacgc tccgcttcag tctgataatg tttctggaaa
     9841 tcggcaattt gcttatctgt cagcatcagc agctgtgtcg gcttgccctg ttcgaaggtt
     9901 gcccgctcaa aggcggcata atggcgataa cgtgacgtca ggcgatagaa aaagcctttt
     9961 tcctgcgcta ctttctcggc ataacaaaca tcagcggcat aataaacgtc cagccccggc
    10021 attttgttga atccaacgac tttatcgacg ggatgttcgc gtaaatgttt ttgcacccag
    10081 gcaaaatact ccgcattgcg cccgtgattg gtatgcgatt taaccggcac tttgatcagt
    10141 tcaaatacat cagggcattc gccttcccac gactgggtat aaacccgaac atgatgacct
    10201 cgggcggcga ctgtctgagc tatacgcata aaatcgcgct gcaaaccgcc aaagggaaaa
    10261 tatttatata aacaaaaagc aacgatcata acgacgtacc tgtcgtggag gagggcagta
    10321 atttatcgac agcagcaatg acatctgccg ccggaataac cgaaagatac atctcatttc
    10381 ggtcacgctg atcgcgcgtt ggcatttccc ggtaatctcc cgcccagaat tgaatcatgt
    10441 tatttgacca gggacgccag aaaatatggt ctgtcgcacc aaacagcgat atcagcggcg
    10501 tattaactgc agcggcaata tgcgccggtg cggaatcaac gccaataaac agctgcgcat
    10561 gatcgattaa cgcaccaagt tccgggaagg tcacctttcc agccagcgcc gttactggtg
    10621 gcgtctggca tccctgcgca atttcattga cgcaggccag atcgtcttta tctgggccgg
    10681 acgtcagaac gacttcataa ccacgagcat gtaaggcatc aatcacagcg gaaaacttgg
    10741 cgttgtccca gcatttgaag atttgccgcg ccgtaggttg gataaccaca taattttgtc
    10801 caacaccagc gtgatcaagt tcgcgacgca tacgtttcca gcttgcaggc gggtaactca
    10861 tggttgtctg cttcaccaac gaatcaagtc ccaatggtgt cagcacggat aagttacttt
    10921 ccaccacatt tccaccctgc aacggcacca aatgggtgaa acttttacgc caaaaagcag
    10981 actgccgatg atgataatcc tgggaaattt tcacacgagc atttaataag cgaaccagta
    11041 tagcaaccat ccattgatcg gtaagattga cgataaggtc atacttattg gcacgtaata
    11101 ccttgatgag atgaaaaaag ttggcaattt tttctgaggc ttttgccttt ttatttttta
    11161 tgccgtagag cgcgttaatc tctggatttt cagacaggat cgggatggtg tcctgataaa
    11221 gcagcacatc gatttttgcg tcagggtaat tttttttcag cgaactaatg acgggagtag
    11281 ttaataacat atccccatga aaacgcatct taatgagcaa aattcttcga aatggcttat
    11341 ccacaagtaa ctctttttgt tgagattatc cgattaaggt gaagcagaaa aagcacgcta
    11401 ccgccccagg ctcaacagct acctgaatac tgataccgca ctgatattga cgcgctagtg
    11461 tatcacttct ttcgcggcaa tccgacccga atgattttta agtacattgt tgattttcaa
    11521 taaagaaatc aatcaaataa aagcattagt aaccatattc ttttactgtt gctctgcgat
    11581 tccttcctgc acgtactgca gaaatcaatg aatcgcatga aaatacaaaa aaagtataga
    11641 tgttcagcaa gaattggcgg gtaaattgct atttaagtca aaaacgggaa aagtaatggt
    11701 aaagccacag ctaaatacat agaatcccca gcacatccat aagtcagcta tttactatgc
    11761 tcgaattgct ttacaccgcc cttctctacc ttattcagcc gctgatctgg atacggctct
    11821 gggtgcgcgg acgtaaggct ccggcctatc gaaaacgctg gggtgaacgt tacggttttt
    11881 accgccatcc gctaaaacca ggcggcatta tgctgcactc cgtctccgtc ggtgaaactc
    11941 tggcggcgat cccgttggtg cgcgcgctgc gtcatcgtta tcctgattta ccgattaccg
    12001 ttacaaccat gacgccaacc ggttcggagc gcgtacaatc ggctttcggg aaggatgttc
    12061 agcacgttta tctgccgtat gacctgcccg atgcgctcaa ccgtttcctg aataaagtcg
    12121 accccaaact ggtgttgatt atggaaaccg aactatggcc taacctgatt gcggcgctgc
    12181 ataaacgtaa aattccgctg gtgatcgcta acgcgcgact ctctgcccgc tcggccgcag
    12241 gttatgccaa actgggtaaa ttcgtccgtc gcttgctgcg tcgtattacg ctgattgctg
    12301 cgcaaaatga agaagatggt gcacgttttg tggcgctggg cgcaaaaaat aatcaggtga
    12361 ccgttaccgg tagcctgaaa ttcgatattt ctgtaacgcc gcagttggct gctaaagccg
    12421 tgacgctgcg ccgccaatgg gcaccacacc gcccggtatg gattgccacc agcactcacg
    12481 aaggcgaaga gagtgtggtg atcgccgcac atcaggcatt gttacagcaa ttcccgaatt
    12541 tattgctcat cctggtaccc cgtcatccag aacgcttccc ggatgcgatt aaccttgtcc
    12601 gccaggctgg actaagctat atcacacgct cttcagggga agtcccctcc accagcacgc
    12661 aggttgtggt tggcgatacg atgggcgagt tgatgttact gtacggcatt gccgatctcg
    12721 cctttgttgg cggttcactg gttgaacgtg gtgggcataa tccgctggaa gctgccgcac
    12781 acgcaattcc ggtattgatg gggccgcata cttttaactt taaagacatt tgcgcgcggc
    12841 tggagcaggc aagcgggctg attaccgtta ccgatgccac tacgcttgca aaagaggttt
    12901 cctctttact caccgacgcc gattaccgta gtttctatgg ccgtcatgcc gttgaagtac
    12961 tatatcaaaa ccagggcgcg ctacagcgtc tgcttcaact gctggaacct tacctgccac
    13021 cgaaaacgca ttgaggttgt tatgcaaaaa cgggcgattt atccgggtac tttcgatccc
    13081 attaccaatg gtcatatcga tatcgtgacg cgcgccacgc aaatgttcga tcacgttatt
    13141 ctggcgattg ccgccagccc cagtaaaaaa ccgatgttta ccctggaaga gcgtgtggcg
    13201 ctggcacagc aggcaaccgc gcatctgggg aacgtggaag tggtcgggtt tagtgatttg
    13261 atggcgaact tcgcccgtaa tcaacacgct acggtgctga ttcgtggcct gcgtgcggtg
    13321 gcggattttg aatatgaaat gcagctggcg catatgaatc gccacttaat gccggaactg
    13381 gaaagtgtgt ttctgatgcc gccgaaagag tggtcgttta tctcttcatc gttggtgaaa
    13441 gaggtggcgc gccatcaggg cgatgtcacc catttcctgc cggagaatgt ccatcaggcg
    13501 ctgatggcga agttagcgta gcgtttatgc cggatggtat gccatccggc gcgcatgaat
    13561 tacttctggc actgccgaca ataaaacgtt gcccgctgcg catgtttagt cgccacaatc
    13621 ggcgtaccgc acacccgaca cggctcgcct tttcgcccgt aaacctgcaa ttcctgcgcg
    13681 aaatagcccg gtttaccatc actttgcaga aaatctttca gagttgtacc accctgctca
    13741 atcgaacgca gcaacaccgc tttaatcacc cgagctaaca attcacactc tgccagcgac
    13801 agtgatgacg ccagccgatc cggatggatc cccgccgcaa acagtgattc gctggcataa
    13861 atattaccta cccctaccac cagcttgtta tccatcagcc acggtttaat cgccgttttt
    13921 ttcttcgcac acttctgatg caggtactca ccgttaaaat cgtcgctaag cggctccggt
    13981 ccaagatggg ccagcacatt atgcccttcc agctctttgg tccacagcca ggcaccaaag
    14041 cggcgcggat cggtgtagcg cagcacttta ccgttgctca tcaccaaatc cacatggtca
    14101 tgcttttcag ggggaagttc ttctggaagg atgcgcaggc tgccagacat ccccaaatga
    14161 atgataatcc agccctcagg cagctccagc agcagatatt tagcccgccg ctgcacgcta
    14221 agcactggtt ggtcgcttaa acggtagatc tcttctgaaa ccggccagcg caagcgtccg
    14281 ttgcgcacca ccgcatgaag aatggttgca ccaacgagat gcggttctat gccgcgacgg
    14341 ctggtttcaa cttcgggtaa ttcaggcata gcatctccag gaatgaacag atgcaatcaa
    14401 tatgggggca agcagataac aaaaaacccc gccggagcga ggtttttcgt tacatcaaag
    14461 cgaaaattat ttgattttcg cttctttgta gatcacgtgc tggcgaacaa ctggatcgaa
    14521 ttttttcagt tccagttttt ccggcttagt acgtttgttc ttcgtagtgg tatagaagtg
    14581 accagtacca gcagaagaaa ccagcttgat tttctcacga atacctttag ccatgattta
    14641 tttcctctaa gtacttagta cttttcgcca cgggcacgca gttcagccag aactgtatcg
    14701 atgccttttt tatcgattac acgcatacct ttagcagata cgcgcagggt gacaaaacgc
    14761 ttctcgctct caacccagaa acggtgagag tgcaggttcg gcaggaaacg gcgtttagtc
    14821 gcgttcagtg cgtgggaacg gttgttaccg gtcaccggac gcttgccagt aacttggcag
    14881 actcgggaca tgtctattct ccaaaaatca aattagctcg agcttcgtat ggggtattgg
    14941 cgcctcgtca ggctttacag cccggtcatc gcagttctat gtgaactctc gattgccagg
    15001 cccaaatgcc aaacccgaga ttctcaaagg tggcgtagta tacgctgact cagcgatgtg
    15061 ctcaagtccc gaacagacaa agatcccgaa ggatcgcgca tagcgggtta aatccagccg
    15121 cgttcggcaa aagaaacata ctctccacgc ccaatcacga tatggtcgag cacgcgtaaa
    15181 tccatgaact gacaactctt tattatccgt tcagtaatga gtttatccgc tttactgggt
    15241 tcagcacaac ccgaagggtg attatgtgca aggatcagcg ccgaggcgtt tatttttatc
    15301 gcttcgcgga taatttcccg aggatggact tcaacatggt ttagcgtgcc ggaaaaaagt
    15361 cggctatgcg ttataacccg gtgttgtgag tcgagaaaga tcaccataaa gatctcccgc
    15421 tcctcacccg tgagctggct ttgtaaaaat tcccgcgtca tctccgggct gagtaaaggg
    15481 ctttcttcac gcatccgcac gttgtagtaa cgccgcgcca gttcagcaat cccctttaac
    15541 tgggcaaatt tcgccacgcc aattccatga acaccactaa attgttcata ttcagaggtt
    15601 aacaagccat aaagagagcc gaaattctcc agcatctctt ttgccagggt taatacatct
    15661 ttaccgcgcg ttccggtacg cagaaatagc gccagcagct cgacatccgt taaggcgcta
    15721 agaccaaact tcagcatttt ttcgcgcggc atcaacagct gtgcattgtt tttcaccttc
    15781 acctcctttg tggtgttcgc atcctgtcat agccgttccg ttaaatcgac ggccagtttt
    15841 caatcctgga aagcgcctcg caaagtgatt ctcaggtgaa ggcacgacaa caaaagtatt
    15901 gtgataaaat cgccaacttc tggtgtcacc caacaggaaa aatcatcatg agcctggccg
    15961 gtaaaaaaat cgttctcggc gttagcggcg gtattgctgc ctataaaacc cctgaactgg
    16021 tgcgtcgttt gcgcgatcgc ggggccgacg tccgcgtagc catgaccgaa gcggcaaaag
    16081 cctttatcac cccacttagc ttgcaggcgg tttctggtta tcccgtttcc gacagtttgc
    16141 tggacccggc agccgaagcc gctatgggcc atattgagct gggtaaatgg gctgatttag
    16201 tgattctcgc ccctgccacg gcagatttga ttgcccgtgt tgctgccgga atggcgaatg
    16261 acctggtatc gacgatttgt ctggctacac ctgcgcctgt agccgtgctc cccgccatga
    16321 accagcagat gtaccgtgcc gctgccacgc agcataattt agaggtgctt gcttcccgtg
    16381 gtttgctcat ctgggggcca gacagtggca gtcaggcttg tggtgatatc ggtcctgggc
    16441 gaatgctcga tccgttaacc attgtggata tggcagtagc gcatttttcg cccgtcaacg
    16501 acctgaaaca tctgaacatt atgattaccg ccggcccgac gcgtgaaccg ctcgatccgg
    16561 tgcgttatat ctctaatcac agctccggca agatgggttt tgctatcgcc gccgccgctg
    16621 cccgtcgtgg cgcgaacgtc acgctggtat caggtccagt ttcactaccg acgccaccgt
    16681 ttgttaaacg tgttgatgtg atgaccgcgc tggaaatgga agccgccgtg aatgcttctg
    16741 tacagcagca aaatattttt atcggttgcg ccgccgtggc ggattatcgc gcagctaccg
    16801 tggccccaga aaaaatcaaa aagcaggcca cgcagggtga tgaattaaca ataaaaatgg
    16861 ttaaaaaccc cgatatcgtc gcaggcgttg ccgcactaaa agactatcga ccctacgtcg
    16921 ttggatttgc cgccgaaaca aataatgtga aagaatacgc ccggcaaaaa cgtatccgta
    16981 aaaaccttga tctgatctgc gcgaacgatg tttcccagcc aactcaagga tttaacagcg
    17041 acaacaacgc attacacctt ttctggcagg acggagataa agtcttatcg cttgagcgca
    17101 aagagctcct tggccaatta ttactcgacg agatcgtgac ccgttatgat gaaaaaaatc
    17161 gacgttaaga ttctggaccc gcgcgttggg aaggaatttc cgctcccgac ttatgccacc
    17221 tctggctctg ccggacttga cctgcgtgcc tgtctcgacg acgccgtaga actggctccg
    17281 ggtgacacta cgctggttcc gaccgggctg gcgattcata ttgccgatcc ttcactggcg
    17341 gcaatgatgc tgccgcgctc cggattggga cataagcacg gtatcgtgct tggtaacctg
    17401 gtaggattga tcgattccga ctatcagggc cagttaatga tttccgtgtg gaaccgtggt
    17461 caggacagct tcaccattca acctggtgaa cgcatcgccc agatgatttt tgttccggta
    17521 gtacaggctg aatttaatct ggtggaagat ttcgacgcca ccgaccgcgg tgaaggcggc
    17581 tttggtcact ctggtcgtca gtaacacata cgcatccgaa taacgtcata acatagccgc
    17641 aaacatttcg tttgcggtca tagcgtgggt gccgcctggc aagtgcttat tttcaggggt
    17701 attttgtaac atggcagaaa aacaaactgc gaaaaggaac cgtcgcgagg aaatacttca
    17761 gtctctggcg ctgatgctgg aatccagcga tggaagccaa cgtatcacga cggcaaaact
    17821 ggccgcctct gtcggcgttt ccgaagcggc actgtatcgc cacttcccca gtaagacccg
    17881 catgttcgat agcctgattg agtttatcga agatagcctg attactcgca tcaatttgat
    17941 tctgaaagat gagaaagaca ccacagcgcg cctgcgtctg attgtgttgc tgcttctcgg
    18001 ttttggtgag cgtaatcctg gcctgacccg catccttacc gggcatgcgc taatgtttga
    18061 acaggatcgc ctgcaagggc gcatcaacca gctgttcgag cgtattgaag cgcaactgcg
    18121 tcaggtattg cgtgaaaaga gaatgcgtga gggtgaaggt tacaccaccg atgaaaccct
    18181 gctggcaagc cagatcctgg ccttctgtga aggtatgctg tcacgttttg tccgcagcga
    18241 gtttaaatac cgcccgacgg atgattttga cgcccgctgg ccgctaattg ccgcgcagtt
    18301 gcagtaatat gacgccggat gacttttcat ccggcgagtt tctttaaacg ccaaactctt
    18361 cgtgataggc cttaaccgcc gccagatgtt ccgccatttc cggcttctct tccagatagg
    18421 caatcagatc tttcagggtg atgatagaga tcactttgca gttgtaatca cgctcaactt
    18481 cctgaatcgc cgaaatctcg ccgcgcccgc gttcctgacg atcgagcgaa atcaacacgc
    18541 cagcaagcgt cgcgccattg gcctgaataa tctccatcga ctcgcgaatc gccgttccgg
    18601 cggtgatcac atcatctacc agcattacgc gtccttgtaa cgcgctacca accagattgc
    18661 cgccttcacc gtggtctttt gcttctttgc ggttaaagca gtacggcagg tccaggtcgt
    18721 aatgctccgc cagtgccaca gcggttgtgg tggcaatcgg gatccctttg taagcagggc
    18781 caaacagcag atcgaactca atgccggaat ccaccaacgc ttcagcgtaa aaacggccta
    18841 acagtgccag atcgcgcccg gtattaaaca gcccggcgtt gaagaaatag gggcttttac
    18901 gcccggattt cagcgtaaac tcgccaaact ttaacacctg cttgctaagc gcaaattcaa
    18961 taaactggcg ctgatatggt ttcatgcctt cgctcctcat cttacttttc tacagacaaa
    19021 aaaaaggcga ctcatcagtc gccttaaaaa tcagtttgcc agcgccgcct tctgcgtcgc
    19081 tacaatggat tcgattcccc ctcgggccag cgccaacaag gtgagtagct cttcatgggt
    19141 gaacggctcg ccttctgccg tcccctgcac ttcaatgatg cgcccgtctt cggtcatcac
    19201 tacgttcatg tcggtctctg cggcagagtc ttcaacgtat tccagatcgc aaaccgcttc
    19261 gccgttcaca attccgacag aaactgcggc taccatccct ttcatcgggt tggttttcag
    19321 cttgccgttt tccaccagct tctgtagcgc atctgccagc gccacgcagg cacccgtaat
    19381 cgacgcggta cgcgtgccac catcagcctg aagcacgtcg cagtccagcg taatggtgaa
    19441 ctcacccagc gctttcaaat ctactgccgc gcgaagagca cgggcgatca gacgctggat
    19501 ttccattgtg cgtccaccct gcttaccttt cgccgcttca cgagcgttac gggtgtgggt
    19561 agaacgtggc agcatgccgt actctgcggt gatccagccc tggccctgac ctttcaggaa
    19621 gcgcggcacg ccttcttcaa tagaggcggt acacaacact ttggtatcgc caaattcgac
    19681 cagcaccgag ccttctgcat gttttgtata gttacgagtc agggtaacgg gacgcacctg
    19741 attattgcta cggcctgctg gacgcatatt gaaatctccg gcttgaaaca aatgtggctg
    19801 cgcattatac ggacttccgg cggttattcc tatcctgaca aggcatcgat ggctataatc
    19861 cttccacctc tccttttata aacaggaacg tctatgatcc gcagtatgac cgcctacgcc
    19921 cggcgtgaaa tcaagggtga atgggggagc gcaacctggg aaatgcgctc ggtaaaccag
    19981 cgttatctgg aaacttactt tcgtctgccg gagcagttcc gtagccttga acctgtcgtt
    20041 cgcgagcgta ttcgttctcg cctgacgcgc ggtaaagtgg aatgtaccct gcgctatgag
    20101 ccagatgtta gcgcacaagg tgagctgatc ctcaatgaaa aactggctaa acagctggta
    20161 actgccgcga actgggtaaa aatgcagagt gacgaagggg aaatcaaccc ggttgatatt
    20221 ctacgctggc cgggcgtgat ggcagcccag gagcaggatc tcgacgccat tgccactgaa
    20281 attctcgcgg cgctggatgg tacgctggac gactttattg tcgcgcgcga aaccgaaggt
    20341 caggcactga aagcattgat cgagcagcgt ctggaaggcg tcaccgccga agtggtcaaa
    20401 gtccgcgccc atatgccgga aatcctgcaa tggcagcgtg agcgtctggt cgcgaagctg
    20461 gaagatgctc aggttcagtt ggaaaacaac cgtctggagc aggagctggt tctgctggca
    20521 caacgaattg acgttgccga agaactggac cgcctggaag cgcatgtcaa agagacctac
    20581 aacattctga agaaaaaaga agccgttggt cgtcgtctgg actttatgat gcaggaattc
    20641 aaccgcgagt cgaacactct tgcgtcgaag tctatcaatg ccgaagtgac aaactccgcg
    20701 attgagctga aagtgttgat tgagcagatg cgcgagcaga ttcagaacat tgaataactc
    20761 gtaacgccaa ttcttacttt tcagccttca caaatgccgc ccactcaaac agagcggcat
    20821 ttttcttccc cgcaacttca attctgtttt gcgtgcctgc tccagatttt gcgatgtttt
    20881 tttgcccagc acactgagaa cgtgagatac tcacaactgt atataaatac agttacagat
    20941 ttactttctt tgcaatcgat atcacatgga gtgggcaatg aacgaacatc atcaaccttt
    21001 tgaagaaata cggcattatg gcactgaagg gcaagaattt tggtcagcta gagaattggc
    21061 accgttactg gattatcggg actggcgcaa ttttcaaaag gtactggccc gcgcgactca
    21121 agcgtgcgaa gccagcaatc aagctgcatc tgaccatttc gttgaaacca ccaaaatggt
    21181 tgtattaggt tcaggggctc aacgagaact tgaagatgtt catctctccc gctatgcctg
    21241 ttacctggta gtacaaaacg gcgaccctgc gaaaccggtt attgcggcag ggcaaactta
    21301 ttttgctatc cagacccgac ggcaggagct ggctgacgat gaagctttca ggcaacttcg
    21361 tgaagacgaa aagcgtcttt ttctgagaaa tgaattgaaa gaacataaca aacaattggt
    21421 tgaggcagcg cagcaagctg gggtagcgac agctatcgat ttcgccatat ttcagaatca
    21481 tggttaccgg gggctgtatg gtggattaga tcagaaagct attcatcagc ggaaggggct
    21541 gaaaaagaat cagaagatcc tggatcatat gggttcaaca gaactggcgg ctaatctctt
    21601 tcgtgctacc caaacagaag aaaaactcaa gcgggatggc gtgaattcaa aacagcaagc
    21661 taataccaca cactttgacg tgggtagcaa ggtgaggcaa accattcagg aacttggcgg
    21721 aaccatgcct gaggagttgc agaccccgca ggtcagcatc aatcagttgg aaaacagtgt
    21781 aaaaattaca gagaagaaat agcagaaact aaaaactctt tttcttaatt gagatacccg
    21841 atgcgtaagc caaagtccag gtgcagtgaa cacaatggct aaacattgca cctttctttt
    21901 ccacccctca attttaacct attttttctt atgcattttc tcagacaaga agtcagaaga
    21961 atgcatctac gctacagaaa atagcgattt cacataacta caagttatca atttcctctc
    22021 accttaaaaa atctcaatcg tgacaatacg cacaaatcgc taccctgcca gacagatttt
    22081 tagggagaga accatgctgt tacacatttt gtatttggtt ggcattactg ccgaagccat
    22141 gacgggggcg ctggcggccg gacgacggcg catggataca tttggcgtaa ttattattgc
    22201 gaccgccacc gcaattggcg gagggtcagt gcgcgatatt ctgctgggcc actatccgct
    22261 cggctgggtc aaacacccgg aatatgtgat tatcgtcgct accgccgcag tactcaccac
    22321 tatcgttgct cctgtaatgc cttacctgcg caaagtgttt ctggtgctcg atgcgctcgg
    22381 actggtggtc ttttctatca tcggcgcaca ggttgcactg gatatggggc acggcccaat
    22441 tattgccgtt gtcgcggcgg taaccaccgg cgtgtttggc ggcgttttgc gcgatatgtt
    22501 ctgtaaacgc atcccactgg tattccagaa agagttgtat gccggtgtct catttgcctc
    22561 cgcggtgctg tacatcgcgc tgcaacacta tgtttctaac catgatgtgg tgattatctc
    22621 caccctggta ttcggctttt ttgcccgctt actggcgcta cgtcttaagc tgggattacc
    22681 ggtcttttac tacagccacg aaggtcacta aggttcaaaa cctgtgatct gctgggcagc
    22741 cagccaactg cccagcttct tgatttgcgc attttccttc cattcaataa cctgtctggc
    22801 gcgcccagat ccagtccccg gcagctgctg ccagaactgc tccgtgctaa ataaaagttg
    22861 cgaccaggac cgttcatcac tggcattaag cgccgcccgg gttaacggta ttcccattgc
    22921 catcacccag cgagtaaaag gctgcttacg agccagatta aactgatgcc ataactgcgc
    22981 acttttactt ttcgcgatcc ccggcgtgtt ctgtaattgc tctggcgtta ataaaagcca
    23041 ggaaaagata tgctcaaa
//
LOCUS       DAJVTL010000063        22947 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.063, whole genome shotgun sequence.
ACCESSION   DAJVTL010000063 DAJVTL010000000
VERSION     DAJVTL010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22947
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.063"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(176..1153)
                     /gene="epmA"
                     /locus_tag="OQQ26_002362"
     CDS             complement(176..1153)
                     /gene="epmA"
                     /locus_tag="OQQ26_002362"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HCS1857798.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIDALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            1478..3286
                     /gene="frdA"
                     /locus_tag="OQQ26_002363"
     CDS             1478..3286
                     /gene="frdA"
                     /locus_tag="OQQ26_002363"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HCS1857799.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQNHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3279..4013
                     /gene="frdB"
                     /locus_tag="OQQ26_002364"
     CDS             3279..4013
                     /gene="frdB"
                     /locus_tag="OQQ26_002364"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur protein"
                     /protein_id="HCS1857800.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQDTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4024..4419
                     /gene="frdC"
                     /locus_tag="OQQ26_002365"
     CDS             4024..4419
                     /gene="frdC"
                     /locus_tag="OQQ26_002365"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HCS1857801.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAAMLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            4430..4789
                     /gene="frdD"
                     /locus_tag="OQQ26_002366"
     CDS             4430..4789
                     /gene="frdD"
                     /locus_tag="OQQ26_002366"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HCS1857802.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            4852..5984
                     /locus_tag="OQQ26_002367"
                     /pseudo
     CDS             4852..5984
                     /locus_tag="OQQ26_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
     gene            6073..6606
                     /gene="blc"
                     /locus_tag="OQQ26_002368"
     CDS             6073..6606
                     /gene="blc"
                     /locus_tag="OQQ26_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin Blc"
                     /protein_id="HCS1857803.1"
                     /translation="MRLLPLVAAATTAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDDVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(6603..6920)
                     /gene="sugE"
                     /locus_tag="OQQ26_002369"
     CDS             complement(6603..6920)
                     /gene="sugE"
                     /locus_tag="OQQ26_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HCS1857804.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVVGIIGLKL
                     STH"
     gene            complement(7096..7242)
                     /gene="ecnB"
                     /locus_tag="OQQ26_002370"
     CDS             complement(7096..7242)
                     /gene="ecnB"
                     /locus_tag="OQQ26_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HCS1857805.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7353..7478)
                     /gene="ecnA"
                     /locus_tag="OQQ26_002371"
     CDS             complement(7353..7478)
                     /gene="ecnA"
                     /locus_tag="OQQ26_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HCS1857806.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(7530..8096)
                     /gene="efp"
                     /locus_tag="OQQ26_002372"
     CDS             complement(7530..8096)
                     /gene="efp"
                     /locus_tag="OQQ26_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HCS1857807.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8138..9166
                     /gene="epmB"
                     /locus_tag="OQQ26_002373"
     CDS             8138..9166
                     /gene="epmB"
                     /locus_tag="OQQ26_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HCS1857808.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFAIAPGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQ"
     gene            9561..10430
                     /locus_tag="OQQ26_002374"
     CDS             9561..10430
                     /locus_tag="OQQ26_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjeJ family protein"
                     /protein_id="HCS1857809.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     NLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQQNGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEIEAITRRMLDFSPRLKKLVGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
     gene            complement(10480..10833)
                     /locus_tag="OQQ26_002375"
     CDS             complement(10480..10833)
                     /locus_tag="OQQ26_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HCS1857810.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
     gene            complement(10971..12617)
                     /gene="groL"
                     /locus_tag="OQQ26_002376"
     CDS             complement(10971..12617)
                     /gene="groL"
                     /locus_tag="OQQ26_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HCS1857811.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM"
     gene            complement(12661..12954)
                     /locus_tag="OQQ26_002377"
     CDS             complement(12661..12954)
                     /locus_tag="OQQ26_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HCS1857812.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            13230..14486
                     /gene="yjeH"
                     /locus_tag="OQQ26_002378"
     CDS             13230..14486
                     /gene="yjeH"
                     /locus_tag="OQQ26_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HCS1857813.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIATRGASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LTCFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCALLLAMVGWKS
                     LYALIMLAGLWLFLPKRKTPENGITT"
     gene            complement(14502..14978)
                     /gene="fxsA"
                     /locus_tag="OQQ26_002379"
     CDS             complement(14502..14978)
                     /gene="fxsA"
                     /locus_tag="OQQ26_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HCS1857814.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDDRDRLDHKDDRQD"
     gene            15315..16751
                     /gene="aspA"
                     /locus_tag="OQQ26_002380"
     CDS             15315..16751
                     /gene="aspA"
                     /locus_tag="OQQ26_002380"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HCS1857815.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            16869..18170
                     /gene="dcuA"
                     /locus_tag="OQQ26_002381"
     CDS             16869..18170
                     /gene="dcuA"
                     /locus_tag="OQQ26_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuA"
                     /protein_id="HCS1857816.1"
                     /translation="MLVEELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            18286..18624
                     /gene="cutA"
                     /locus_tag="OQQ26_002382"
     CDS             18286..18624
                     /gene="cutA"
                     /locus_tag="OQQ26_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HCS1857817.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            18600..20297
                     /gene="dsbD"
                     /locus_tag="OQQ26_002383"
     CDS             18600..20297
                     /gene="dsbD"
                     /locus_tag="OQQ26_002383"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HCS1857818.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAAPQPVSVPQQEQPT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFIMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDIWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQRALADTVLLQA
                     NVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            20334..20909
                     /locus_tag="OQQ26_002384"
     CDS             20334..20909
                     /locus_tag="OQQ26_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1857819.1"
                     /translation="MQRENVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIA
                     ACMFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
     gene            21016..21091
                     /locus_tag="OQQ26_002385"
     tRNA            21016..21091
                     /locus_tag="OQQ26_002385"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21049..21051,aa:Phe,seq:gaa)
     gene            21289..22551
                     /locus_tag="OQQ26_002386"
     CDS             21289..22551
                     /locus_tag="OQQ26_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1857820.1"
                     /translation="MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRI
                     LGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIA
                     RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEI
                     ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGS
                     YKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERKPLPGVKFSHRGS
                     KMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDT
                     TQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLML
                     QWWADFLDANRDKGISPFEYAKINNPLK"
BASE COUNT         5679 a         5887 c         5712 g         5669 t
ORIGIN      
        1 gaactgcact gcccaacatt gagcgggcag cgtaaaaacc aatacagaat tgatacctgg
       61 atgatatcaa atatccagtc ttaaattgtg gcatttaacg gaaaaatgaa aacatatgct
      121 acagaatggc gcttatcacg ccattcttcg ctgttaattc agtaattttt cagaattatg
      181 cccggtcaac gctaaaggcg atgacttcag ccagtgtctc cgcgcccagc gccaacatca
      241 ccagacgatc aacacctaat gccacgccgg aacagtcagg cataccgact ttcaaggcgt
      301 caatcagatt ctggtcaatg gggtgctgcg gcaaaccgcg cgccgcgcgc ttacggttat
      361 cttgttcaaa gcgttgttgc tgctcacggg catccgtcaa ttcatggaaa ccattcgcca
      421 gctcaatacc tttataataa acctcaaagc gttcagcgac ccgatgatct tcggtactga
      481 tttgcgccag tgatgcctgg ctggctggaa agtggtacac aaaggtcggt ttttctttgc
      541 caatatttgg ctctacgcca aaggtaaaca gcaattgtag caacgtgtcg cggtcttctt
      601 cggtatcagc aacgttactc aaatccagtt tcgctgcgac ttcccgcagt tgcgttttgt
      661 cggcagagag cgggtcaatt tccagataac gcaagaaagc ttgttgataa gaaaggcttt
      721 ctgctgccgg gcagtccagc acctgttgta agagatcgtc cacctcgttc atcaaccggt
      781 acatatcata gtgcggtcga taccactcaa gcatagtgaa ctcagggttg tgataacgcc
      841 ccatctcttc attacggaag ctgcggcaca gctggaatac cggcccacaa ccagcaacca
      901 gcaggcgttt catatggtat tccgggctgg tcattaacca gagattcatc ccctgcgaat
      961 gcccggggcc aacgaaacgt gtctcaaacg ggaccaaatg aatatcggtt accgtcgcct
     1021 ggctcataca aggcgtctcc acctccagca ctccacgatc ggcaaagaaa cgacggatct
     1081 ccgccataat cgccgcgcgt tttaataagt taggaatgga tgcgctcggc tgccaggatg
     1141 ccgtttcgct catagttaaa tctccagttt ttgacaaggg cacgaagtct actcgcaacg
     1201 cgacggcgag acaaatttta cgcaggaatc aaacagcggt gggcagtgac taaaaaaagc
     1261 acgatctgat ggtttagtaa ttaaattaat catcttcagt gataatttag ccctcttgcg
     1321 cactaaaaaa atcgatctcg tcaaatttca gacttatcca tcagactata ctgttgtacc
     1381 tataaaggag cagtggaata gcgttcgcag accgtaactt tcaggcactt accctgaagt
     1441 acggggctgt gggataaaaa caatctggag gaatgtcgtg caaacctttc aagccgatct
     1501 tgccattgta ggcgccggtg gcgcgggatt acgtgctgca attgctgccg cgcaggcaaa
     1561 tccaaatgca aaaatcgcac taatctcaaa agtatacccg atgcgtagcc ataccgttgc
     1621 tgcagaaggg ggctccgccg ctgtcgcgca gaatcatgac agcttcgaat atcactttca
     1681 cgatacagta gcgggtggcg actggttgtg tgagcaggat gtcgtggatt atttcgtcca
     1741 ccactgccca accgaaatga cccaactgga actgtgggga tgcccatgga gccgtcgccc
     1801 ggatggtagc gtcaacgtac gtcgcttcgg cggaatgaaa atcgagcgca cctggttcgc
     1861 cgccgataag accggcttcc atatgctgca cacgctgttc cagacctctc tgcaattccc
     1921 gcagatccag cgttttgacg aacatttcgt gctggatatt ctggttgatg atggtcatgt
     1981 tcgcggcctg gtagcaatga acatgatgga aggcacgctg gtgcagatcc gtgctaacgc
     2041 ggtcgttatg gctactggcg gtgcgggtcg cgtttatcgt tacaacacca acggcggcat
     2101 cgttaccggt gacggtatgg gtatggcgct aagccacggc gttccgctgc gtgacatgga
     2161 attcgttcag tatcacccaa ccggtctgcc aggttccggt atcctgatga ccgaaggctg
     2221 ccgcggtgaa ggcggtattc tggtcaacaa aaatggctac cgttatctgc aagattacgg
     2281 catgggcccg gaaactccgc tgggcgagcc gaaaaacaaa tatatggaac tgggtccacg
     2341 cgacaaagtt tctcaggcct tctggcacga atggcgtaaa ggcaacacca tctccacgcc
     2401 gcgtggcgat gtggtttatc tcgacctgcg tcacctcggc gagaaaaaac tgcatgaacg
     2461 tctgccgttc atctgcgaac tggcgaaagc gtacgttggc gtcgatccgg ttaaagaacc
     2521 gattccggta cgtccgaccg cacactacac catgggcggt atcgaaaccg atcagaactg
     2581 tgaaacccgc attaaaggtc tgttcgccgt gggtgaatgt tcctctgttg gtctgcacgg
     2641 tgcaaaccgt ctgggctcca actccctggc ggaactggtg gtcttcggcc gtctggccgg
     2701 tgaacaagcg acagagcgtg cagcaactgc cggtaatggc aacgaagcgg caattgaagc
     2761 gcaggcagct ggcgttgaac aacgtctgaa agatctggtt aaccaggatg gcggcgaaaa
     2821 ctgggcgaag atccgcgacg aaatgggcct agcaatggaa gaaggttgcg gtatctaccg
     2881 tacgccggaa ctgatgcaga aaaccatcga caagctggca gagctgcagg aacgcttcaa
     2941 gcgcgtgcgc atcaccgaca cctccagcgt gttcaacacc gacctgctct acaccattga
     3001 actgggccac ggtctgaacg ttgctgaatg tatggcgcac tccgcaatgg cacgtaaaga
     3061 gtcccgcggc gcacaccagc gtctggacga aggttgcacc gagcgtgacg acgtcaactt
     3121 cctcaaacac accctcgcct tccgcgatgc tgatggcacg actcgcctgg agtacagcga
     3181 cgtgaagatt actacgctgc cgccagctaa acgcgtttac ggtggcgaag cggatgcagc
     3241 cgataaggcg gaagcagcca ataagaagga gaaggcgaat ggctgagatg aaaaacctga
     3301 aaattgaggt ggtgcgctat aacccggaag tcgataccgc accgcatagc gcattctatg
     3361 aagtgcctta tgacgcaact acctcattac tggatgcgct gggctacatc aaagacaacc
     3421 tggcaccgga cctgagctac cgctggtcct gccgtatggc gatttgtggt tcctgcggca
     3481 tgatggttaa caacgtgcca aaactggcat gtaaaacctt cctgcgtgat tacaccgacg
     3541 gtatgaaggt tgaagcgtta gctaacttcc cgattgaacg cgatctggtg gtcgatatga
     3601 cccacttcat cgaaagtctg gaagcgatca aaccgtacat cataggcaac tcccgcaccg
     3661 cggatcagga tactaacatc cagaccccgg cgcagatggc gaagtatcac cagttctccg
     3721 gttgcatcaa ctgtggtctg tgctacgccg cgtgcccgca gtttggcctg aacccagagt
     3781 tcatcggtcc ggctgccatt acgctggcgc atcgttataa cgaagatagc cgcgaccacg
     3841 gtaagaagga gcgtatggcg cagttgaaca gccagaacgg cgtatggagc tgtactttcg
     3901 tgggctactg ctccgaagtc tgcccgaaac acgtcgatcc ggctgcggcc attcagcagg
     3961 gcaaagtaga aagttcgaaa gactttctta tcgcgaccct gaaaccacgc taaggagtgc
     4021 aacatgacga ctaaacgtaa accgtatgta cggccaatga cgtccacctg gtggaaaaaa
     4081 ttgccgtttt atcgctttta catgctgcgc gaaggcacgg cggttccggc tgtgtggttc
     4141 agcattgaac tgattttcgg gctgtttgcc ctgaaaaatg gcccggaagc ttgggcggga
     4201 ttcgtcgact ttttacaaaa cccggttatt gtgatcatta acctgatcac tctggcggca
     4261 gctatgctgc acaccaaaac ctggtttgaa ctggcaccga aagcggccaa tatcattgta
     4321 aaagacgaaa aaatgggtcc agagccaatt atcaaaagtc tctgggcggt aactgtggtt
     4381 gccaccatcg taatcctgtt tgttgccctg tactggtaag gagcctgaga tgattaatcc
     4441 aaatccaaag cgttctgacg aaccggtatt ctggggcctc ttcggggccg gtggtatgtg
     4501 gagcgcaatt attgcgccgg tgatgatcct gctggtgggt attctgctgc cgctggggct
     4561 gtttccgggt gatgcactga gctacgagcg cgttctggcg ttcgcgcaga gcttcattgg
     4621 tcgcgtattc ctgttcctga tgatcgttct gccgctgtgg tgtggtttac accgtatgca
     4681 ccacgcgatg cacgatctga aaatccacgt acctgcgggc aaatgggttt tctacggtct
     4741 ggctgctatc ctgacagttg tcacgctgat tggtatcgtt acaatctaac gtatcgccaa
     4801 tgtaaatccg gcccgcctat ggcgggccgt tttgtatgga aaccagacct tatgttcaaa
     4861 acgacactct gcgccttatt aattaccgcc tcttgctcca catttgctgc ccctcaacaa
     4921 atcaacgata ttgtgcatcg cacaattacc ccgcttatag agcaacaaaa gatcccgggt
     4981 atggcggtgg cggtaattta tcagggtaaa ccttattact ttacctgggg ctatgcggac
     5041 atcgccaaaa agcagcccgt cacacagcaa acgttgtttg agttaggttc ggtcagcaaa
     5101 acatttacgg gcgtgcttgg tggcgacgct attgctcgag gggaaatcaa gttaagcgat
     5161 cccgcaacaa aatactggcc tgaacttacc gctaaacagt ggaacgggat cacactatta
     5221 catctcgcaa cctacaccgc tggcggcctg ccattgcagg tgccggatga ggtgaaatcc
     5281 tcaagcgact tgctgcgctt ctatcaaaac tggcagcctg catgggcgcc aggaacacaa
     5341 cgtctgtatg ccaactccag tatcggtttg ttcggcgcac tggctgtgaa gccgtctggt
     5401 ttgagttttg agcaggcgat gcaaactcgt gtcttccagc cactcaaact caaccatacg
     5461 tggattaatg taccgtccgc agaagaaaag aattacgcct ggggatatcg cgaaggcaag
     5521 gctgttcatg tttcgccagg ggcgttagat gctgaaactt atggtgtgaa gtcgaccatt
     5581 gaagatatgg cctgctgggt acgaagcaat atgaatcccc gtgatatcaa cgacaaaaca
     5641 cttcagcaag ggatacaact ggcacaatct cgctactggc aaaccggcga tatgtatcag
     5701 ggcctgggct gggaaatgct ggactggccg gtaaatcctg acagcatcat taacggcagt
     5761 ggcaataaaa ttgcactggc agcacacccc gtaaaagcga ttacgcccca actcctgcag
     5821 tacgcgcatc atgggtacat aaaacagggg caaccggcgg atttggtagc tatgtcgcgt
     5881 ttattccaga aaaagagctg ggtatagtga tgctggctaa caaaaactat cccaatccag
     5941 cgagagtcgc cgccgcctgg cagattctca acgctctaca gtaaaatttc atcgggtccg
     6001 aattttcgga ccttttctgc gcttttcctt gctgtcatct acacttagaa aaaaaccagt
     6061 aaggaaacat ttatgcgcct gctccctctc gttgccgcag cgacaactgc atttctggtc
     6121 gttgcctgca gttctcctac gccgccgcgt ggcgtaacag tagtgaataa tttcgacgcc
     6181 aaacgttatc tcggtacctg gtatgagatt gcccgttttg atcaccgttt tgaacgtgga
     6241 ctggaaaaag tcaccgcaac atacagcctg cgtgatgacg gcggcctgaa tgtcattaat
     6301 aaaggctata accctgacag aggaatgtgg cagcagagtg aagggaaagc gtactttacc
     6361 ggcgcaccaa ctcgcgctgc gctgaaagtg tcattctttg gtcctttcta tggcggttat
     6421 aacgttattg cactcgatcg ggaataccgc catgcgctgg tttgcggccc ggaccgcgac
     6481 tacctgtgga tactctcccg cacgccaacc atttctgacg atgtgaaaca ggagatgctg
     6541 gcagtcgcga cccgggaagg gtttgatgtc agtaagttta tttgggtaca gcagcccggt
     6601 agttagtgag tgctgagttt cagaccaata atccccacta cgattaacgc cagactcgcc
     6661 aggcgcatcg ggttagcgga ctcaccgagc agcacaatac cggtgatggc cgcgccgact
     6721 gcgccaatac ccgtccacac ggcataagcc gtccctactg gtaacgattt catcgcccag
     6781 gcaagtagcg ccatactgac aatcatcgcc gtcacagtaa taacacttgg cgtcaaacga
     6841 ctaaagccgt gggtatattt caggccaacg gcccatacca cttccagcag accagcaata
     6901 actaagataa tccaggacat atcaggctcc ggaaatttgg ggccgtcccc ggtgaaaaga
     6961 ggcgtttgca ggtcgtcctg caaaactgat ggttgaacgg atattttgcc aggtggcagg
     7021 ggaatttcaa ctgtttcctt tatgactatc gcagaaaaaa caaacggcac gacactgctg
     7081 tcgtaccgtt attgcttatt gctgcgcttt cgttgctgcg ccagaaatcg cgttaccgcc
     7141 atcagaaatg tcttcaccaa cgccacgcgt ggtgttgcag gcagttaata ctgttgaaag
     7201 caccagaaca gaaaagatcg ctgcaattgt cttcttcacc ataacgtctt ccttttaggt
     7261 aatgttattt atgtttgcct atagcaaatt aataatagac aacatcgcca aaaatgatgg
     7321 aaatctgatg atttttcgga agagaagaaa aattagctgg cagcgcgaga gatggagttg
     7381 ccgagatgtt tgatgtcttc gccgaaaccg cgagcggtgt tacagcccgt gagcagcgtg
     7441 ctggcaagca aaacaagaac gataaggcgt ttcatcatct ctgacctgaa taagtgatgg
     7501 tgcagcctgc aggccgcacc acaaccgcat tacttcacgc gagagacgta ttcaccagag
     7561 cgggtatcca ctttgatgac ttcgccgatt tgtacgaaca gcggaacttt aaccacagcg
     7621 ccagtagaca gggtagccgg tttgccgcca gtacctgcgg tatcaccttt caggcccgga
     7681 tcggtatcaa cgatttccag ttcaacgaag ttcggcggag taacggagat cggctgacca
     7741 ttccacagag ttacgataca ctctgcctga tccagcagcc atttagcgtt gtcgccaatt
     7801 gcttttgcgt cagcagacag ctgctcgaaa gtttcgttgt tcatgaagtg ccagaactca
     7861 ccgtcgttgt acaggtaagt caggttcata tcgacaacat cagcgccttc agcggaatca
     7921 gtagatttga aggttttttc tacgcgagta ccggtcagca gacgacgcag tttaacgcga
     7981 gcaaatgcct ggcctttacc cggttttacg aattcactcg cttcaaccgc gtaaggttcg
     8041 ccgtctaaca tgattttaag accagcacga aaatcgttgc tatagtacgt tgccataagg
     8101 ccctctgaaa tttgttaatt ggtagctaag ccacaaaatg gcgcatattg taaccctaaa
     8161 taccccatcc agagaagatt ggttaacgca acttgccgat gttgtgaccg atcctgatga
     8221 acttctgcgt cttttgaata tagacgcgga cgaaaaactg ttggccggac gcaacgccaa
     8281 aaagctgttt gccctgcgtg tgccccgctc atttatcgat cgcatggaga aaggcaatcc
     8341 ggacgatccg cttttgcgtc aggtacttac ctcgcaagat gagtttgcca tcgcgcccgg
     8401 attctccacc gacccgctgg aagaacagca cagcgtagtg cctggtttgt tgcataaata
     8461 ccacaaccgg gcgcttttgc tggtcaaagg cggctgtgcg gtaaattgcc gttattgctt
     8521 ccgtcgccac ttcccttatg cagaaaatca gggcaacaag cgtaactggc aaactgcact
     8581 tgagtatgtt gctgcgcatc cggaactgga cgagatgatt ttctccggcg gcgatccgct
     8641 gatggcgaaa gatcacgagc tggactggtt gctcacacaa ctggaagcca tcccgcatat
     8701 caaacgtctg cggattcaca gtcgtctgcc gattgtgatc ccggcacgca tcaccgaggc
     8761 gctggttgaa cgcttttcac attctacgct gcaaatcttg ctggtgaatc acatcaacca
     8821 tgccaatgag atagatgaaa cattccgtca ggcgatggct aagttgcgcc gggcgggcgt
     8881 tactttgctg aaccagagcg ttctgttacg tggtgtgaac gataacgcac aaacgctggc
     8941 aaacctgagt aatgcgttgt tcgatgcagg cgtgatgccg tattacctgc atgtgctcga
     9001 taaagtacag ggcgcggcgc attttatggt gagtgatgac gaagcacggc agattatgcg
     9061 tgagttgctg acactggtgt cgggatatct ggtgccgaaa ctggcgcgag aaattggcgg
     9121 cgaacccagc aaaacgccgc tggatctcca gctacgccag cagtaactga ttaaacaggg
     9181 aagtcaaaca ttaaaattgc ctgatgcgct acgcttatca ggcctacatc gtgcattgaa
     9241 attgaatgga tttgcaatga actgtaggcc ggataaggcg tttacgccgc atccggcaag
     9301 agcaacaaac gcaagtacag caacctgtca ttaaactggg aaatttaatc tttgcacgtt
     9361 gcataacctt taattattca tatgcattgc tgttgttact ctttatataa ctaacaccaa
     9421 taattaacct ttcttttctg tttatataga gtgagtacgg ctatttatgt tattttaaaa
     9481 actattacta ccaagcccat ttatctggct tataaattaa aattaattat ttaattgaga
     9541 aatggttagg gagaacctac atggccataa gcatcaaggg tgttaatacc ggtgttatcc
     9601 gcaagagtaa taatttcatt gcactggcgc taaaaattaa agaacctcgc aataaagaat
     9661 cgttgttctt tatgtctgtc atggaactgc gcaacctgct gattgcgctg gaaagtcgtc
     9721 tgcatcaaaa gcataaactg gatgctgctg cacgccttca gtatgagcaa gctcgcgata
     9781 aagtcattaa gaaaatggca gaaaatatcc cagaaattct ggttgatgag cttaaaaatg
     9841 ccgatattaa tcgtcgggtt aacacgctgg aacttaccga taatcaaggc gaaaatctta
     9901 ccttcgtatt aacgctacat gacggtagca aatgtgagtt agtcgtcaat gaattgcaga
     9961 ttgaaatgct ggcgcgagca atcattcatg caattaataa tgcggaaatg cgtgaactgg
    10021 cattacgtat tacctcactg ttagatttcc tgccgttata cgacgttgac tgccagcaaa
    10081 atggcaatct ggaatatgac acctattccc aaccggaatg gaaacataac ttgttcgacc
    10141 attatctggc ggtgctttac cgctttaaag atgaaagtgg caaagaacaa tttagcggcg
    10201 cagtggtgaa aacgcgtgaa gcaacgccgg gtaaagaaat agaggcgatc actcgccgaa
    10261 tgcttgattt cagcccacga ctgaaaaaac tcgtgggtgt gccatgtcag gtctatgttc
    10321 gcaccgtagc ggcgaataac gcccaaccgc taacccagga tcaatgctta cgcgcgctgc
    10381 atcacttacg tgttcaatcc accagcaaaa ctgcaccaca ggcgaaataa tctcatctgt
    10441 tttactacga ggctggaagt atccagcctc tggatcccat cagttcgggc acttatatac
    10501 ctggccgata atctggctat ccgtcgggac aaaactggac aacattccct gcgacgggct
    10561 actgatgcca taaatcacgt taccgcccat tgcagccgcc tggttgcgca gatcgtttgc
    10621 tgcgccgcgc atagaaccgc cttcttctcc gtgttgcccg gaaagccagt tgctttgctt
    10681 acctgtcgca gtaccaatca gctggcactc tgcgcctggc tgctcgtcca caatgcgtac
    10741 actctgaccg gcagcactca attcgttgct ggagctacaa cccgccatca gtagcgcggc
    10801 accgacaatc cctgctaagt attttacgtg catgttattc cccataatca atgagctgga
    10861 cgctactcgc gtcgtccgtg tctgaatctt atactagaaa gatgaccaaa agaaaaaccc
    10921 ccagacattt ctgcccgggg gtttgtttat ttctgcgagg tgcagggcaa ttacatcatg
    10981 ccgcccatgc cacccatgcc gcccataccg ccagcagcgc ctaagtcagc tgcatcgttt
    11041 ttcggcaggt cggtaaccat gcattcggtg gtgatcatca ggccagccac agaagctgcg
    11101 tactgcagag cagaacgggt tactttggtt ggatccaaga tacccatgtc gatcatgttg
    11161 ccgtattctt cggttgctgc gttgtaaccg tagttgccgt cgccgccttt aacggtgtta
    11221 gcaacaacag acggttcttc gccgcagttc aggacgatct gacgcagcgg agcttccatt
    11281 gcacgcagtg caactttgat acccacgttc tggtcttcgt tctgaccacg caggtcagcc
    11341 agtttagacg ctacgcggat cagcgcaaca ccaccaccag caaccacgcc ttcttctacc
    11401 gcagcacggg tcgcgtgcag ggcgtcttca acgcgtgctt ttttctcttt catttcaact
    11461 tcggtagcag cacctacttt gataactgca acgccgcctg ccagtttcgc tacgcgttcc
    11521 tgcagttttt cacggtcgta gtcagaagtt gcttcttcaa tctgctgacg gatctgagca
    11581 acacggccct ggattgcagc ttcttcaccc acgccatcaa tgatggtggt agtgtctttg
    11641 ttgatcacaa cacgtttagc ctgacccagg tcttccaggg ttgctttttc cagctccata
    11701 ccgatctctt cagagattac ggtaccgcca gtcagggttg cgatatcctg cagcatagct
    11761 ttacgacgat cgccgaagcc cggagcttta accgcagcaa ctttcacgat gccacgcatg
    11821 gtgttaacaa ccagagttgc cagcgcttcg ccttcaacat cttcagcgat gatcagcagc
    11881 ggtttacctg ctttggcaac agcttccaga accggcagca tttcgcggat gttggagatt
    11941 ttcttgtcag ccagcaggat gaacgggctt tccagttcta ctgcgccagt ttccggcttg
    12001 ttgatgaagt aaggagacag gtagccacgg tcgaactgca taccttcaac cacgtccagt
    12061 tcgtcctgca gaccggtacc gtcttcaacg gtgataacgc cttctttacc gactttgtcc
    12121 atcgcttcag cgatcagttt acctacggtt tcgtcggagt tagcggagat ggtaccaacc
    12181 tgagcaatcg ctttagagtc agagcacggt acggacagcg ctttcaattc ttcaactgca
    12241 gcggtaacgg ctttgtcgat accacgtttc aggtccatcg ggttcatgcc cgcagcaaca
    12301 gctttcagac cctcagtgat gatagcctga gccagtacgg ttgcagtggt ggtaccgtcg
    12361 cctgcagcgt cgttcgcttt agaggcaact tctttcacca tctgcgcacc catattttcg
    12421 aacttgtctt ccagttcgat ttcacgagca acggaaacac catctttggt gatggtcggt
    12481 gcaccgaaag atttatccag aactacgtta cggcctttcg gaccgagggt aactttcact
    12541 gcatctgcca gtacgtttac gccgcgcagc attttcacac gagcgtcgtt accgaatttt
    12601 acgtctttag ctgccattat ctttattcct taaattcgta tgttcagtgt cgtgcgcgga
    12661 ttacgcttca acaattgcca gaatgtcgct ttcggacatg atcaacactt cttcattgtc
    12721 gatcttctcg gatttcacac cgtagccatc gttgaaaata acgatgtcgc caactttcac
    12781 gtccagcggc ttcacttcgc cattttcaag gatacggcca ttgccgacag ccagcacttc
    12841 gccgcgggtg gatttagccg ctgcagagcc ggtcagaacg atgccgccag cagatttagt
    12901 ttcaacttct ttacgcttga cgatcacgcg atcatgcaat ggacgaatat tcattgataa
    12961 ctctcctttg agaaagtccg tatctgttat gggtgacgcc ggagcttacg tggtttcccg
    13021 gctggtgacc agagaaatgg ggatgaggct tcgccccttc aagggggaaa aagaaaaaaa
    13081 attctgatca gcacaaaatc gggtgaaaac cctgattcac ctcacatttc atcgcaattt
    13141 cttcatcacc gtcataagcg aatctgattg tgctaccatc gaaaatctac gcagttgccc
    13201 aaaatttggg cgcaatcgga catcaaccca tgagtggact caaacaagaa ctggggctgg
    13261 cccagggcat tggcctgcta tcgacgtcat tattaggcac tggcgtgttt gccgttcctg
    13321 cgttagctgc actggtagca ggcaataaca gcctgtgggc gtggcccgtt ttgattatct
    13381 tagtgttccc gattgcgatt gtgtttgcga ttctgggtcg ccactatccc agcgcaggcg
    13441 gcgtcgcgca cttcgtcggt atggcgtttg gttcgcggct tgagcgagtc accggctggc
    13501 tgtttttatc ggtcattccc gtgggtttgc ctgccgcact acaaattgcc gccgggttcg
    13561 gccaggcgat gtttggctgg catagctggc aactgttgtt ggcagaactc ggtacgctgg
    13621 cgttggtgtg gtatatcgct actcgcggtg ccagttccag tgctaatcta caaaccgtta
    13681 ttgccggact tatcgtcgcg ctgattgtcg ctatctggtg ggcgggcgat atcaaacctg
    13741 cgaatatccc cttcccggcg ccaggaaata tcgaacttac cgggttattt gctgcgttat
    13801 cagtgatgtt ctggtgcttt gtcggtctgg aagcatttgc ccatctcgcc tcggaattta
    13861 aaaatccaga gcgtgatttt cctcgtgctt tgatgattgg tctgctgctg gcaggattag
    13921 tctactgggg ctgtacggta gtcgtcttac acttcgacgc ctatggtgaa aaaatggcgg
    13981 cggcagcatc gcttccaaaa attgtagtgc agttgttcgg tgtaggagcg ttatggattg
    14041 cctgcgtaat tggctatctg acctgctttg ccagtctcaa catttatata cagagcttcg
    14101 cccgcctggt ctggtcgcag gcgcaacata atcctgacca ctacctggca cgcctctctt
    14161 ctcgccatat cccgaataat gccctcaatg cggtgctcgg ctgctgcgtg gtgagcactt
    14221 tggtgattca tgctttagag atcaatctgg acgctcttat tatttatgcc aatggcatct
    14281 ttattatgat ttatctgtta tgcatgctgg caggctgtaa attattgcaa ggacgttatc
    14341 gactactggc ggtggttggc gggctgttat gcgctctgtt actggcaatg gtcggctgga
    14401 aaagtctcta tgcgctgatt atgctggcgg ggttatggct gtttctgcca aaacgaaaaa
    14461 cgccggaaaa tggcataacc acataatccg gcgtttcgac attaatcctg gcgatcgtct
    14521 ttatgatcaa ggcggtcgcg gtcatcatcc tttcgctggt actcaccatc aaaagtatta
    14581 ccgccaccgg tcccggcgct aaaaccgccg cctggcatac gagaaaagcg caaatgcggc
    14641 atcaacttca ctgtcagatg cttttgcacc ggcggtaata aaagcagaag accgaggaag
    14701 tcggtgaaaa agcccggtaa taaaagcagc aaaccggcaa tgatcagcga aacactttta
    14761 atcatctccg ccgctgggtt ttcacccgcc gccatttttt gctgcatcag cacgaaattc
    14821 ttaaagccct ggttacgtac cagtgacatc ccgataactg acgtgaatat aaccagcacg
    14881 agggtcagca atacccccaa tacatgggca acctgaataa agattgaaat ctcaatatag
    14941 acataaagga aaatggcaat aaaaggtaac cagcgcaaag gtttctcctg taatagcagc
    15001 cggtaaaacc cggctacctg aatgggttgc gaatcgcgtt cagcttatat tgtggtcatt
    15061 agcaaaattt caagatgttt gcgcaactat ttttggtagt aatcccaaag cggtgatcta
    15121 tttcacaaat taataattaa ggggtaaaaa ccgacactta aagtgatcca gattacggta
    15181 gaaatcctca agcagcatat gatctcaggt attcggtcga tgcaggggat aatcgtcggt
    15241 cgaaaaacat tcgaaaccac atatattctg tgtgtttaaa gcaaatcatt ggcagcttga
    15301 aaaagaaggt tcacatgtca aacaacattc gtatcgaaga agatctgttg ggtaccaggg
    15361 aagttccagc tgatgcctac tatggtgttc acactctgag agcgattgaa aacttctata
    15421 tcagcaacaa caaaatcagt gatattcctg aatttgttcg cggtatggta atggttaaaa
    15481 aagccgcagc tatggcaaac aaagagctgc aaaccattcc taaaagtgta gcgaatgcca
    15541 tcattgccgc atgtgatgaa gtcctgaaca acggaaaatg catggatcag ttcccggtag
    15601 acgtctacca gggcggcgca ggtacttccg taaacatgaa caccaacgaa gtgctggcca
    15661 atatcggtct ggaactgatg ggtcaccaga aaggtgaata tcagtacctg aacccgaacg
    15721 accatgttaa caaatgtcag tccactaacg acgcctaccc gaccggtttc cgtatcgcag
    15781 tttactcttc cctgattaag ctggtagatg cgattaacca actgcgtgaa ggctttgaac
    15841 gtaaagctgt cgaattccag gacatcctga aaatgggtcg tacccagctg caggacgcag
    15901 taccgatgac cctcggtcag gaattccgcg ctttcagcat cctgctgaaa gaagaagtga
    15961 aaaatatcca acgtaccgct gaactgctgc tggaagttaa ccttggcgca acagcaatcg
    16021 gtactggtct gaacacgccg aaagagtact ctccgctggc agtgaaaaaa ctggctgaag
    16081 tcactggctt cccatgcgta ccggctgaag acctgatcga agcgacctct gactgcggcg
    16141 cttatgttat ggttcacggc gcgctgaaac gcctggctgt gaagatgtcc aaaatctgta
    16201 acgacctgcg cttgctctct tctggtccac gtgccggcct gaacgagatc aacctgccgg
    16261 aactgcaggc gggctcttcc atcatgccag ctaaagtaaa cccggttgtt ccggaagtgg
    16321 ttaaccaggt atgcttcaaa gtcatcggta acgacaccac tgttaccatg gcagcagaag
    16381 caggtcagct gcagttgaac gttatggagc cggtcattgg ccaggccatg ttcgaatccg
    16441 ttcacattct gaccaacgct tgctacaacc tgctggaaaa atgcattaac ggcatcactg
    16501 ctaataaaga agtgtgcgaa ggttacgttt acaactctat cggtatcgtt acttacctga
    16561 acccgttcat cggtcaccac aacggtgaca tcgtgggtaa aatctgtgcc gaaaccggta
    16621 agagtgtacg tgaagtcgtt ctggaacgcg gtctgttgac tgaagcggaa cttgacgata
    16681 ttttctccgt acagaatctg atgcacccgg cttacaaagc aaaacgctat actgatgaaa
    16741 gcgaacagta atcgtacagg gtagtacaaa taaagaaggc acgtcagatg acgtgccttt
    16801 tttcttgtga gcagtaactt aaaaataaca atctaatatc aacttgttaa aaaacaagga
    16861 aggctaatat gctagttgaa gaactcatca tagttttgct ggcgatcttc ttgggcgcca
    16921 gattgggggg aataggcatt ggttttgcag gcggattggg ggtgctggtt cttgccgcta
    16981 ttggcgttaa acccggtaac atcccgttcg atgtcatttc cattatcatg gcggttatcg
    17041 ccgctatttc tgccatgcag gttgctggcg gtctggacta tctggttcat cagacagaaa
    17101 agctgctgcg ccgtaacccg aaatacatca cgatcctcgc acctatcgtg acctatttcc
    17161 tgactatctt tgctggtact ggcaacatct ctctggcgac actgccagtt atcgctgaag
    17221 ttgcgaagga acaaggcgtt aaaccttgcc gtccgctgtc tactgcagtg gtatccgcgc
    17281 agattgcgat caccgcatcg ccaatctcag cggcagtggt ttacatgtct tccgtgatgg
    17341 aaggtcatgg catcagctac ctccatctgc tctccgtggt catcccgtcc accctgctgg
    17401 cggttctggt gatgtccttc ctggtcacta tgctgttcaa ctccaaactc tctgacgatc
    17461 cgatttatcg caagcgtctg gaagagggcc tggttgaact gcgcggtgaa aagcagattg
    17521 aaatcaaatc cggtgcaaaa acgtccgtct ggctgttcct gctgggcgta gttggcgtgg
    17581 ttatctatgc aatcatcaac agcccaagca tgggtctggt tgaaaaaccg ctgatgaaca
    17641 ccaccaacgc aatcctgatc atcatgctca gcgttgcaac tctgaccacc gttatctgta
    17701 aagtcgatac cgacaacatc ctcaactcca gcaccttcaa agcaggtatg agcgcctgta
    17761 tttgtatcct gggtgttgcg tggctgggcg atactttcgt ttccaacaac atcgactgga
    17821 tcaaagatac cgctggtgaa gtgattcagg gtcatccgtg gctgctggcc gtcatcttct
    17881 tctttgcttc tgctctgctg tactctcagg ctgcaaccgc aaaagcactg atgccgatgg
    17941 ctctggcact gaacgtttct ccgctgaccg ctgttgcttc tttcgctgcg gtgtctggtc
    18001 tgttcattct gccgacctat ccgacgctgg ttgctgcggt acagatggat gacacgggta
    18061 caacccgtat cggtaaattc gtcttcaacc atccgttctt catcccgggt actctgggtg
    18121 ttgccctggc cgtttgcttc ggcttcgtgc tgggtagctt catgctgtaa tgaccaatcg
    18181 cggggcgttc acgccccgct ttctttcccg ccgactaaca tccttccccc gtccgttgta
    18241 tagtgacctc tctcttgcgg ttccatctgt tcttgcgagg tgtttatgct tgatgaaaaa
    18301 agttcgaata ccgcgtctgt cgtggtgcta tgtacggcac cagatgaagc gacagcccag
    18361 gatttagccg ccaaagtgct ggcggaaaaa ctggcggcct gcgcgacctt gatccccggc
    18421 gctacctctc tctattactg ggaaggtaag ctggagcaag aatacgaagt gcagatgatt
    18481 ttaaaaacta ccgtatctca ccagcaggca ctgctggaat gcctgaagtc tcatcatcca
    18541 tatcaaaccc cggaacttct ggttttacct gttacacacg gagacacaga ttacctctca
    18601 tggctcaacg catctttacg ctgatcctgc tactttgcag cacttccgtt tttgccggat
    18661 tattcgacgc gccgggacgt tcacaatttg tccccgcgga tcaagccttt acttttgatt
    18721 ttcagcaaaa ccaacatgac cttaatctga cctggcagat caaagacggt tactacctct
    18781 accgtaaaca gatccgcatt acgccggaac acgcgaaaat tgccgacgtg cagcttccgc
    18841 aaggcgtctg gcatgaagat gagttttacg gcaaaagcga gatttaccgc gatcggctga
    18901 cgcttcccgt aaccatcaac caggcgagtg cgggagcgac gttaactgtc acctatcagg
    18961 gctgtgctga tgccggtttc tgttatccgc cagaaaccaa aaccgttccg ttaagcgaag
    19021 tggtcgccaa caacgcagcg ccacagcctg tgtctgttcc gcagcaagag cagcccaccg
    19081 cgcaattgcc cttttccgcg ctctgggcgt tgttgatcgg tattggtatc gcctttacgc
    19141 catgcgtgct gccaatgtac ccactgattt ctggcatcgt gctgggtggt aaacagcggc
    19201 tctccactgc cagagcattg ttgctgacct ttatttatgt gcaggggatg gcactgactt
    19261 acacggcgct gggtctggta gttgccgccg cagggttaca gttccaggcg gcgctacagc
    19321 acccatacgt gctcattggc ctcgccatcg tctttacctt gctggcgatg tcaatgtttg
    19381 gcttgtttac tctacaactc ccctcctcgc tgcaaacgcg cctcacgttg atgagcaatc
    19441 gccaacaggg cggctcaccc ggcggagtgt ttattatggg ggcgattgcc gggctgatct
    19501 gttcaccatg caccaccgca ccgcttagcg cgattctgct gtatatcgcc caaagcggga
    19561 acatgtggct gggcggcggc acgctttatc tctatgcatt gggcatgggc ctgccgctga
    19621 tgctcattac cgtctttggt aaccgcttgc tgccgaaaag cggcccgtgg atggaacaag
    19681 tcaaaaccgc gtttggtttt gtgatcctcg cactgccggt cttcctgctg gagcgagtga
    19741 ttggtgatat atggggatta cgcttgtggt cggcgctggg tgtcgcattc tttggctggg
    19801 cctttatcac cagcctacag gccaaacgcg gctggatgcg cgtggtgcaa ataatcctgc
    19861 tggcagcggc attggttagc gtgcgcccac ttcaggattg ggcatttggt gcgacgcata
    19921 ccgcgcaaac tcagacgcat ctcaacttta cacaaatcaa aacggtagat gagttaaatc
    19981 aggcgctcgt tgaagccaaa ggcaaaccgg tgatgttaga tctttatgcc gactggtgcg
    20041 tcgcctgtaa agagtttgag aaatacacct tcagcgaccc gcaggtgcaa agagcgttag
    20101 cagacacggt cttacttcag gccaacgtca ctgccaacga cgcacaagat gtggcgctgt
    20161 taaagcatct taatgtcctt ggcctaccga caattctctt ttttgacgga caaggccagg
    20221 agcatccaca agcacgcgtc acgggcttta tggatgctga aaccttcagc gcacatttgc
    20281 gcgatcgcca accgtgaacg acacttgcag tgggaaagac ggaggaaaat agcgtgcaac
    20341 gtgaaaatgt actgggagaa gccctgaaat tattagaatt acaagggatt gccaacacca
    20401 cgctggagat ggttgctgaa cgtgtggatt atccactgga cgagctgcgc cgtttctggc
    20461 cagacaaaga ggcaatcctc tacgatgcgc tgcgttatct tagccaacag atagatgtct
    20521 ggcgtcgtca gttgatgctg gacgaaacgc aaaccgccga acaaaagctg ctggcacgtt
    20581 atcaggcgtt atcggagtgc gttaaaaaca accgctatcc gggctgtcta tttatcgctg
    20641 cctgtatgtt ttatcccgat cctggccacc ctattcatca actggccgat cagcaaaaaa
    20701 gcgcggccta cgatttcacc cacgaactgt taaccacgct ggaagttgac gatccggcga
    20761 tggtagcaaa gcagatggaa ctggtgctgg aaggctgttt aagccgaatg ctggtgaatc
    20821 gtagccaggc ggatgtcgac actgcacatc ggctggcgga agatatcctg cgcttcgccc
    20881 gctgccgcca gggtggtgca ttgacctgac agaaacacag aaaagaagcg atttgccgca
    20941 atcttaagca gttgaatcgc ttttactgaa attaggttga cgagatgtgc agattacggt
    21001 ttaatgcgcc ccgttgcccg gatagctcag tcggtagagc aggggattga aaatccccgt
    21061 gtccttggtt cgattccgag tccgggcacc aaattcatat caacggacct ccacggaggt
    21121 ccgtttttcg tttcagaacg ccacgattta agcgttctgc ctacaaatca attctaccga
    21181 actcaaccag attcccccca catcaacccc attgtgtggg tataattgcg ggtatacccc
    21241 agttcgacag aatttgtacc ctctttaacg cattcagaag gctgaactat ggcactgact
    21301 gacgcaaaaa tccgggctgc aaagcccact gacaaggctt ataaactcac tgacggggct
    21361 ggcatgttcc tgctggtaca tcctaatggt tcccgttact ggcgtctccg ttatcgtatt
    21421 ctgggtaagg agaagactct ggcacttggt gtgtatccag aagtttctct ctccgaagct
    21481 cgtacaaaac gggatgaggc ccgaaaactg atttcggagg gggttgaccc ttgcgaacag
    21541 aaaagagcta aaaaagtagt ccctgattta cagctctctt ttgaacatat tgcacgacgc
    21601 tggcatgcca gtaataaaca atgggcacaa tcacacagcg ataaagtact caaaagcctc
    21661 gagactcacg ttttcccctt tatcggcaac cgggatatca caacactcaa taccccggat
    21721 ctgcttatcc ctgttcgtgc tgcagaagct aaacaaattt atgaaatcgc cagtcgtctg
    21781 cagcaaagaa tatctgccgt aatgcgttat gccgtacagt ctggcatcat cagatataat
    21841 cctgctctgg atatggctgg cgcattgact acggtaaaac gccagcatcg ccccgctctt
    21901 gatctttctc gcctgcctga acttttgtcg cgtattggca gttacaaagg gcaacctgtc
    21961 acccagcttg ccgttatgct gaatttactg gtttttattc gttccagtga actcagatac
    22021 gcccgctggt ctgaaattga tattgacaat gccatgtgga ctattccagc cgaacgcaaa
    22081 cctctgccag gcgtaaaatt ctcacaccgg ggctccaaga tgcgaacacc acatcttgtg
    22141 ccactcagca aacaggctgt agccatactg acagaactac agacatgggc tggtgaaaat
    22201 ggtctgatct ttacgggagc acatgacccg cgtaaaccaa tcagtgaaaa tactgtaaat
    22261 aaagccctga gggtgatggg gtatgacaca acccaggatg tctgtggcca tggattccgg
    22321 gcgatggcgt gcagtgcatt gattgaatca ggtttgtggt cccgcgatgc tgtggaacgt
    22381 cagatgagcc atcaggagcg taatggtgta cgtgctgcgt atatccataa agcagaacat
    22441 ctggaagaac gtcgactgat gctacagtgg tgggcagatt ttctggatgc gaacagagat
    22501 aagggtatca gcccgtttga atatgcaaag attaacaatc cattaaaata gtaagcagtc
    22561 cgggctgatt gcccggactg ctttaactga ttatttttct ttgtaaatga tgacgaagat
    22621 tgatgttctg gcaagttact ccggcttcca ttaaagtccc ttcgtcatgt tcttcaggct
    22681 atttatgact gtgattagca ccaggaatat ctggtttcca tgagagcagg taataacccc
    22741 cggtgttttc ggctgttctg gtatccttgt ccaacacagg cagtcattat aaacggtaaa
    22801 aaatgtattc actgttatga aatcaatagt cctgacgtac tgttgaatgt gcttgcgttc
    22861 tgaaccttgt acaaccagta catttgatac cgaattataa acaaaacatt gcatccaact
    22921 ttttcaatat ggacaatagt tgtccat
//
LOCUS       DAJVTL010000064        22927 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.064, whole genome shotgun sequence.
ACCESSION   DAJVTL010000064 DAJVTL010000000
VERSION     DAJVTL010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22927
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.064"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..419
                     /gene="citT"
                     /locus_tag="OQQ26_002387"
     CDS             <1..419
                     /gene="citT"
                     /locus_tag="OQQ26_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="citrate/succinate antiporter CitT"
                     /protein_id="HCS1857821.1"
                     /translation="VMANGLTRSDFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAHY
                     LFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIYG
                     CGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN"
     gene            533..1339
                     /gene="rna"
                     /locus_tag="OQQ26_002388"
     CDS             533..1339
                     /gene="rna"
                     /locus_tag="OQQ26_002388"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HCS1857822.1"
                     /translation="MKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQ
                     TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG
                     CATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF
                     GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKL
                     TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKAGY"
     gene            1569..1979
                     /gene="rnk"
                     /locus_tag="OQQ26_002389"
     CDS             1569..1979
                     /gene="rnk"
                     /locus_tag="OQQ26_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HCS1857823.1"
                     /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
                     SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
                     VGDSIHWELPGGVATHLEVLELEYQPEAAGDYQL"
     gene            complement(2210..3448)
                     /locus_tag="OQQ26_002390"
     CDS             complement(2210..3448)
                     /locus_tag="OQQ26_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
                     /protein_id="HCS1857824.1"
                     /translation="MKALTYHGPHHVQVENVPDPGIEQADDIILRITATAICGSDLHL
                     YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRLQQYA
                     ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPSLL
                     SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD
                     HHPYRLHFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDTVIDAVGFEAKGSTTET
                     VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLSFKMGQT
                     HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECCKVILVPGAQS
                     AEAAQKAVSGLVNAMPGGTI"
     gene            3669..4097
                     /gene="uspG"
                     /locus_tag="OQQ26_002391"
     CDS             3669..4097
                     /gene="uspG"
                     /locus_tag="OQQ26_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HCS1857825.1"
                     /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSA
                     SLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
                     ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
     gene            complement(4218..5783)
                     /gene="ahpF"
                     /locus_tag="OQQ26_002392"
     CDS             complement(4218..5783)
                     /gene="ahpF"
                     /locus_tag="OQQ26_002392"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017455864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HCS1857826.1"
                     /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ
                     NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV
                     GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH
                     VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE
                     DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
                     DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG
                     LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS
                     LSAFDYLIRTKTA"
     gene            complement(6028..6591)
                     /gene="ahpC"
                     /locus_tag="OQQ26_002393"
     CDS             complement(6028..6591)
                     /gene="ahpC"
                     /locus_tag="OQQ26_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HCS1857827.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            6963..7709
                     /gene="dsbG"
                     /locus_tag="OQQ26_002394"
                     /pseudo
     CDS             6963..7709
                     /gene="dsbG"
                     /locus_tag="OQQ26_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415137.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
     gene            7919..8821
                     /locus_tag="OQQ26_002395"
     CDS             7919..8821
                     /locus_tag="OQQ26_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1857828.1"
                     /translation="MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYIPPSAVSQS
                     LQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFII
                     YGPQLISCSNNSMLIRCLRQDASVEIECHDILMSAENAEELLVHRKADLVITQMPVIS
                     RSVICMPLHTIRNTLICSNKHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDEK
                     FINRKNSFRGSSLLTIINSIAVTDLLGIVPYELYNSHRDFLNLKEIKLEHPSPSIKLY
                     ISYNKSSLNNLVFSRFIDRLNESF"
     gene            8968..10188
                     /locus_tag="OQQ26_002396"
     CDS             8968..10188
                     /locus_tag="OQQ26_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HCS1857829.1"
                     /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML
                     HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS
                     LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPA
                     AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW
                     YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS
                     GVKSGSIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKTAEHYRNKIAIYWHW
                     YQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERI
                     KGKRQEWGILCNND"
     gene            10161..10790
                     /locus_tag="OQQ26_002397"
     CDS             10161..10790
                     /locus_tag="OQQ26_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB-like nuclease domain-containing protein"
                     /protein_id="HCS1857830.1"
                     /translation="MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFRE
                     EPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIV
                     DGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIV
                     RELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK"
     gene            complement(10791..11951)
                     /gene="ybdL"
                     /locus_tag="OQQ26_002398"
     CDS             complement(10791..11951)
                     /gene="ybdL"
                     /locus_tag="OQQ26_002398"
                     /EC_number="2.6.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-oxo-acid transaminase"
                     /protein_id="HCS1857831.1"
                     /translation="MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDG
                     PRYLQERLAYHVAQGANQYAPMTGVQALREAIAQKTERLYGYQLDADSDITVTAGATE
                     ALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALL
                     SERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASV
                     LAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLA
                     IADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDD
                     VEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL"
     gene            12060..13148
                     /gene="hcxA"
                     /locus_tag="OQQ26_002399"
     CDS             12060..13148
                     /gene="hcxA"
                     /locus_tag="OQQ26_002399"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcxA"
                     /protein_id="HCS1857832.1"
                     /translation="MPHNPIRVVVGPANYFSHPGSFNHLNDFFTDEQLSRAVWIYGKR
                     AIAAAQTKLPPAFGLPEAKHILLRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
                     KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
                     NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALS
                     DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
                     KVAYGILVQSALLGQDDVLAQLTGVYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP
                     VESIHYLPVTLTPDTLRAAFEKVESFKA"
     gene            complement(13158..13355)
                     /locus_tag="OQQ26_002400"
     CDS             complement(13158..13355)
                     /locus_tag="OQQ26_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HCS1857833.1"
                     /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(13538..15643)
                     /gene="cstA"
                     /locus_tag="OQQ26_002401"
                     /pseudo
     CDS             complement(13538..15643)
                     /gene="cstA"
                     /locus_tag="OQQ26_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415130.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
     gene            complement(15824..16237)
                     /gene="entH"
                     /locus_tag="OQQ26_002402"
     CDS             complement(15824..16237)
                     /gene="entH"
                     /locus_tag="OQQ26_002402"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HCS1857834.1"
                     /translation="MIWKRHLTLEELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT
                     RTHQLFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
                     QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
     gene            complement(16240..16986)
                     /gene="entA"
                     /locus_tag="OQQ26_002403"
     CDS             complement(16240..16986)
                     /gene="entA"
                     /locus_tag="OQQ26_002403"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
                     EntA"
                     /protein_id="HCS1857835.1"
                     /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY
                     PFATEVMDVADAAQVAQVCQQLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAV
                     NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
                     ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
                     ANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            complement(16992..17654)
                     /gene="entB"
                     /locus_tag="OQQ26_002404"
                     /pseudo
     CDS             complement(16992..17654)
                     /gene="entB"
                     /locus_tag="OQQ26_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308661.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis bifunctional
                     isochorismatase/aryl carrier protein EntB"
     gene            complement(17668..19287)
                     /gene="entE"
                     /locus_tag="OQQ26_002405"
     CDS             complement(17668..19287)
                     /gene="entE"
                     /locus_tag="OQQ26_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase EntE"
                     /protein_id="HCS1857836.1"
                     /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID
                     GERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
                     ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVAEHSSIRVVQLHNDSGE
                     HNLQDAINHPAEGFTATPSPADEVAYFQLSGGTTGTTGTPKLIPRTHNDYYYSVRRSV
                     EICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIAKHQV
                     NVTALVPPAVSLWLQALAEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQV
                     FGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPY
                     TFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEI
                     ENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPD
                     RVECVDSLPLTAVGKVDKKQLRQWLASRASA"
     gene            complement(19297..20472)
                     /gene="entC"
                     /locus_tag="OQQ26_002406"
                     /pseudo
     CDS             complement(19297..20472)
                     /gene="entC"
                     /locus_tag="OQQ26_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308659.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
     gene            20846..21802
                     /gene="fepB"
                     /locus_tag="OQQ26_002407"
     CDS             20846..21802
                     /gene="fepB"
                     /locus_tag="OQQ26_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HCS1857837.1"
                     /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES
                     QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
                     IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
                     EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
                     LEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDANAIY
                     ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF"
     gene            complement(21806..>22927)
                     /gene="entS"
                     /locus_tag="OQQ26_002408"
     CDS             complement(21806..>22927)
                     /gene="entS"
                     /locus_tag="OQQ26_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HCS1857838.1"
                     /translation="IQMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILL
                     ARGTCGIGFIGLCLNALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLM
                     QAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPP
                     QPREHPLKSLLAGFRFLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAQIG
                     FLYAAIPLGAAIGALTSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLA
                     LFGWLSAVSSLLQYTMLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPV
                     ASASASGFGLLIIGVLLLLVLVELRRFRQTPPQVTASDS"
BASE COUNT         5721 a         6291 c         5612 g         5303 t
ORIGIN      
        1 ttgtgatggc taacggcctg actcgttctg attttattga ctggttcgcc ggtaccatga
       61 gtacgcacct ggaaggattc tcaccaaacg caacggtgat tgtactggtt ctggtgttct
      121 actttgcaca ctacctgttt gccagcctgt ctgcgcacac cgcaaccatg ctgccggtta
      181 ttctggccgt cggtaaaggg atcccgggcg taccaatgga acaactgtgt attctgctgg
      241 tgctgtctat cggtatcatg ggctgtctga cgccgtatgc aaccggtcct ggggtgatta
      301 tttacggctg tggctatgtg aaatcaaaag attactggcg tcttggcgca atcttcgggg
      361 tgatttacat ctctatgctg ctgttggttg gctggccgat tctcgccatg tggaactaat
      421 acgttcgcca aacgctgaat aaatcatcac gcccgccagg taagcccacc tggcgggctt
      481 ttttatgatt taatagatag tattcagtgt atgtatgagt tccacaccca ttatgaaagc
      541 attctggcgt aacgccgcgt tgctcgcggt ttctctgctt cccttctctt ctgccaacgc
      601 cttagcgttg caggcaaaac agtatggcga ttttgatcgc tatgtcctgg ccctctcctg
      661 gcaaaccgga ttttgccaga gtcaacacga tcgaaatcgt aacgaacgag atgaatgtcg
      721 cctgcaaacc gaaacgacca acaaagctga ttttctgacc gtacatggtc tgtggccagg
      781 attgcctaaa tcggttgctg cccgtggtgt tgatgaacgc cgctggatgc gcttcggttg
      841 cgctactcgc ccaatcccga atctaccaga agcgcgcgcc agccgaatgt gttcatcgcc
      901 ggaaaccgga ttatcactgg aaacggccgc taaactaagt gaagtcatgc caggagctgg
      961 cggacgttcc tgcctggaac gctacgaata tgccaaacac ggtgcctgct ttggttttga
     1021 tccggacgca tacttcggta cgatggtacg cctgaatcaa gaaattaaag agagcgaagc
     1081 cggaaaattc cttgcggata attacggtaa aacagtgagc cgccgtgact ttgacgccgc
     1141 ctttgccaaa agctggggaa aagagaacgt gaaagcagtt aagctaacgt gccagggtaa
     1201 ccctgcgtat ttgactgaaa ttcagatctc gatcaaagct gacgccatca acgctccgct
     1261 ttctgcaaac tcattcttgc cacaacctca cccaggtaac tgtggcaaaa cctttgtgat
     1321 tgataaagcg ggttattaat catctgattt acaaaacacg ctaattcgtc tcccataaac
     1381 catgacgatt aagatttata cataatgcgc tgcattgagg aattccctga atgtgacgca
     1441 aatcacttca aagagtgagc aacagtcagt atcatcatgt gagttaaacc ctcgccgcca
     1501 gacggtgagg gttttctttt gggtatgttt atctgcgaca ctcgcagtac cgacgacatg
     1561 gagtaaaaat gtccagacca actatcatca ttaacgacct ggatgccgaa cgcatcgata
     1621 ttctgctgga gcaacccgcc tatgctggtt tgccaatcgc cgacgcgtta aacgcagagt
     1681 tggatcgcgc ccaaatgtgt tcgccagaag agatgccaca cgacgtggtg acaatgaaca
     1741 gccgggttaa attccgcaat cttagcgatg gcgaagtgcg tgtgcgcacg ctggtgtatc
     1801 cggcaaaaat gaccgatagc aatactcagc tttccgttat ggctccggta ggtgccgcac
     1861 tgctggggct gcgcgttggc gattccattc actgggaact tccgggcggc gttgcaaccc
     1921 accttgaagt gctggaactc gaataccagc cagaagctgc tggcgactac cagctttaat
     1981 cccatctgca caagcgataa ctcgctttgc ccagaggatg cactcgcatc ctctttacgc
     2041 aaaatcagca atttttcctg gttctcactg ttcacttttg ctgcaaaatt attccgtttc
     2101 gtttgtggga ataaccatgg cagaagcatt ttacatcctg ataggatttc tgattatggc
     2161 ggcgattatc gtcatggctg tcctttacct cgaaaaccac tcctgacgat catattgttc
     2221 cccccggcat cgcattcacc aggcctgaaa ccgccttctg cgccgcctct gcgctttgtg
     2281 caccgggtac cagaatcacc ttacagcact cctcttcacg tttttcgaaa atctcatatc
     2341 cccgggcggc ctcttcaaac ggcatatagt gggtaacaat ttcttctggt ttcagtaatc
     2401 ctttctcaat taacggtaat aattctccca gccatgcgtg aacgtgggtc tgtcccattt
     2461 taaacgacaa ccctttatca aaggcgtcgc caaacaggaa accgtgaata aatccagcgt
     2521 agacgcccgg tacgctaaca atgccgccac gcctgaccgc cgcaatacac tgacgcaacg
     2581 ctttaccgct gctgccctcc agtttcaggt tagtcagcac cgtttccgtg gtgctgcctt
     2641 tcgcttcaaa accgacggcg tctattactg tatccactcc ccggtgacct gccgtttgtt
     2701 caataattga ctgtgccgga tcgctatctt catcgaaatt aatcgggatc gcgccgtagc
     2761 ggtcagcggc gaaatgcaag cggtagggat gatgatcaac aacaaaaatc tgttccgcac
     2821 cgagcaaccg tgcacaggcg attgtcaaca atcccacagg accggcacca tagacagcaa
     2881 cgcttgaacc ttgttggatc tgcgcatttt ttgctgcctg ccatgccgtt ggcagaatat
     2941 cagaaaggaa aagggcttta tcatctgaaa gcaaagacgg tactttaaac ggccccacat
     3001 tccctttagg gacacggaca tactccgcct gtccaccagg aacgccacca tacaggtgac
     3061 tataaccaaa caatgccgcg ggagctggta tctgtttttt attgagcgca gcgcctttac
     3121 ccgcattggt attttcgcag gcggcatatt gctgtaatcg acagaaaaaa cagtcgccac
     3181 aagcaatgac gaacggaatt accacccggt cgcctttttg caaatttttt acgtcctttc
     3241 cggtttcaac gacttccccc ataaattcat gaccaaaaat atcgccatgt ttaacctggg
     3301 gtattttgcc tcgataaaga tggaggtcag agccacagat cgccgttgcc gttatacgca
     3361 gaataatatc atctgcctgt tcaatgcccg gatcgggaac attttctacc tgaacgtgat
     3421 gtgggccgtg ataagtcaat gctttcatac aacctccaga gacagttcaa aaaagagtca
     3481 gtctttaagg gtagctatca cagcgggaaa acgggcggta ccacaggttt tgggagaatt
     3541 cctggtgttc agtgagaata tattcatcac agaaacagtt cgtaaggaaa aagaaccaga
     3601 caaatatcag ggataaatat tataatcatg gcgaatgatt tgttcatgat taacagggag
     3661 aaagggttat gtataagaca atcattatgc cagttgatgt atttgaaatg gaattgagcg
     3721 acaaagctgt tcgccacgct gaattcctcg cccaggatga cggagttatt catctacttc
     3781 acgtactacc cgggtcagcc agcctgagcc tgcaccgttt tgccgctgat gtgcgtcgtt
     3841 ttgaagagca tctgcaacat gaagcagaag aacgtctgca aacgatggtc agccacttca
     3901 ccatcgatcc ttcccgcatt aaacaacatg tccgttttgg tagcgtgcgg gatgaagtca
     3961 atgagttggc agaagaactg ggggctgatg ttgtagttat cggttctcgc aacccatcga
     4021 tttcgaccca tctgttaggt tctaacgcct cgagcgtgat ccgccacgcc aatctgccgg
     4081 tgctggttgt gcgttaattg tcagaataag tctccagccc tgcccggagc catcccggcg
     4141 gggcttttta ttgccataaa aaagccgcca ggtttgaccc cggcggctaa gcgattgcag
     4201 gtgaatctta cttcttctta tgcagttttg gtgcgaatca ggtagtcaaa agcactcaga
     4261 gaggctttgg caccttcgcc agtggcgatg atgatctgct tgtacggaac cgtcgtacag
     4321 tcacccgctg cgaatacgcc tttaacgttg gtttcgcatt tcgcatcaat gataatctcg
     4381 cccatgcggt tacgttcgac tgcgccttcc agccagttgg tgttcggcag cagaccaatc
     4441 tggacgaaaa taccagccag ttcgatgttg tgaatatcgc cgctgacacg atctcgatat
     4501 tccagaccaa cgactttgct gccgtcgcct ttcacttccg tggtttgcgc attcagaata
     4561 atgtcgacgt ttttcaggct gcgcagtttg tcctgcagca cctggtcggc tttcatttct
     4621 ggcgcaaatt ccagcagagt tacgtgctca acgatacccg ccaggtcgat tgccgcttcc
     4681 acgccggagt taccgccgcc gataaccgct acgcgtttgc ctttaaacag cgggccgtcg
     4741 cagtgcgggc agtaggtcac gcctttggtg cgatactgat cttcgccagg aacgttcatg
     4801 ttgcgccatt ttgcaccggt cgccacgata atgctgcgtg ctttcagtac cgcgccagaa
     4861 gctgtttcaa tctgatgcag accaccttca actgctgctg ggatcagttt gctggcgctc
     4921 tggctgtcga tcacatcaac gtcgtattca tcaacgtgaa ctttcagtgc gcctgccaac
     4981 ttctgccctt cagtcttcgg tacagaaatg tagttttcga tatcaacggt atcgaggatc
     5041 tgaccaccaa aacgttcgcc catcagaccg gtacggatgc ctttacgtgc ggagtaaatt
     5101 gctgccgctg cacccgccgg gccggaacca acgattaata cgtcataagc atcacgcttg
     5161 ttcagctctt ctgccgcacg tttttccgcg ccagtatcaa ttttggcaac gatttcagtc
     5221 aacgtcatgc ggccctgacc aaactctttc ccgtttacga acactgccgg aacgcccatc
     5281 acgttgcgat cggtgatttc gttctggaag gtgccgccgt caattgcagt gtgcttgatg
     5341 cgcgggttca atacgctcat caggttcagc gcctgcacca cgtccgggca gttatggcaa
     5401 gagagcgagt aataggtttc gaattcaaaa tcaccgtcaa tatggcgaat ctgctccagc
     5461 agagactgcg cttctttcga cggatgacca ccggtccaca gtaacgccag taccagcgag
     5521 gtgaactcgt ggcccagcgg ggagcctgca aaacgtggcc cctggttgga acctgggttg
     5581 gtgatcagga aagacggctt acgcaccggc aagctgttat cttctttaaa ggtgactttg
     5641 tctgacagtt ctgcgatttc agccaacagt tccttgattt ctgccgattt agcgctgtca
     5701 tccagcgtgg caattaactc aacaggcttg gtcaatttct caaggtaagc cttgagttga
     5761 gttttcatat ttgtgtcgag catgtttatc tcctgggctt taaacatcat catgcaagcg
     5821 gcctctgcgg ctacctggat gcagcttgca tcatggtgcg gggaagaaaa tcgggtgccg
     5881 cagcacccga agaattaggt gaatttccga agtatttcgc gtcagagcaa ggcggctagc
     5941 ctgtgaatac ccgggagctt acacaagtaa gtgaccgggg tgagcgggcg acgccaacgc
     6001 cgctatggcg tgaaagacga aggaaattta gattttacca accaggtcca gagacggagc
     6061 cagagttgct tcaccttctt tccatttagc cgggcaaact tcacctgggt gagaagctac
     6121 gtactgtgct gctttgattt tacgcagcag gtcagacgcg tcacggccaa tgccttcagc
     6181 ggtaacttcg attgcctgga tgataccctg cgggtcaaca acgaaggtcg cacggtcagc
     6241 cagaccttca tcttcacgca tgttgtcgaa gttacgggtc agggcgccag tcgggtcgcc
     6301 gatcatcgca tatttgattt tagcgatggt ttcagagctg ctgtgccatg ctttgtgggt
     6361 gaagtgagta tcggtagata ctgcgtatac gtctacgccc agtttctgca gttcttcgta
     6421 gtggtcagca acgtcaccca gttcggtcgg gcatacgaaa gtaaagtcag ccgggtagaa
     6481 gaagaagacg ctccagcggc cttcggtatc tttttcggtg atttcgatga attcgccgtt
     6541 tttgaatgcc tggtttttaa aaggtttaat tttggtgtta atcaaggaca tctatacttc
     6601 ctccgtgttt tcgatgagat gtaaggtaac caatttttgc cgattcggct aatgcgtttc
     6661 cattatcaaa tcgataagtt ttaccttaca accttcgtaa gacaactttg tgaactttgc
     6721 accgccagcg gcgataaaaa gtaaaatggc cccctttcca ggtgaccgtg taatctgaac
     6781 taccctttgg tatcttcagc gcctgcctgc aggctgaggt gttgccctta caaatgcaac
     6841 aacgacatgg attacaacac cctcataaac aaagggcaat cacctgatct aagctcttac
     6901 ctatgacagt gataggttat gccttttact cgacttttgc actgactgaa aaggacaaat
     6961 taatgttaaa aaagatactt ttactggctc tgcttcctgc aatcgccttc gcagaggaac
     7021 ttcctgctcc agtaaaagcg attgaaaaac agggcattac aatcatcaaa acgttcgatg
     7081 cccccggagg aatgaaaggt tatctcggaa agtatcagga tatgggcgtc accatctacc
     7141 tgactccaga tggtaagcac gctatctctg gttacatgta caacgagaaa ggtgaaaacc
     7201 tgagtaaccc acttatcgaa aaagaaattt acgcaccagc cggacgcgaa atgtggcaac
     7261 ggatggaaca atcccactgg ctcctcgacg gtaaaaaaga tgcgccggtc attgtctacg
     7321 tcttcgccga tccgttctgc ccatattgta aacagttctg gcagcaggcg cgcccgtggg
     7381 tagattctgg caaagtgcaa ttaagaacat tgttggttgg ggttatcaag ccagaaagcc
     7441 cggcgacagc agcggcaatt cttgcctcca aagatcccgc aaaaacctag caacaatatg
     7501 aagcctctgg tggcaagctt aagctaaacg tgcctgcaaa cgtaagtaca gagcaaatga
     7561 aagtgttaag tgacaatgag aaactgatgg acgatctggg ggcaaatgtc acgccggcta
     7621 tctattacat gagtaaggaa aatacgctac aacaggccgt ggggttgccc gatcagaaaa
     7681 cgcttaatat cattatgggg aataaataaa agataactca tggatggttg aaatatatct
     7741 ctgcttttca accatcctaa aaaagcatga attgctcgct ctgccctaag tggctgtgct
     7801 attttagaaa aacttaatcc tgagttaagc aaaaaaacat aatcaataaa aacacatacg
     7861 caaaaaacat tgattaagtg aatataccat ggaagaaaaa tataaaccgg agtagtgtat
     7921 ggccaatctc tacgacttga aaaagttcga cttaaatctt cttgtcatat ttgagtgtat
     7981 ttaccagcat ttaagcatta gcaaagctgc tgaatcacta tatatccccc catcagccgt
     8041 gagccagtcg ttacaacgct tacgtgcgca atttaatgac cctttattca ttcgctcagg
     8101 aaaaggtatc gcgccgacga caacagggtt gaatctgcat caccatcttg agaaaaacct
     8161 cagaggcctt gaacaaacaa ttaatatagt caataagtcc gaactaaaga aaaactttat
     8221 tatctacggc cctcagctca tttcttgctc taataatagt atgctgatcc gctgcctacg
     8281 gcaagatgcc tctgtcgaga ttgagtgcca tgatatcctc atgtcagcag agaatgctga
     8341 agaactgttg gttcaccgca aagccgatct ggtgatcacc caaatgccag tgatcagccg
     8401 ttccgtcatt tgcatgccat tgcatacaat tcgcaatact ctaatttgta gtaataagca
     8461 tccgcgaatt accgacaata gcacttatga acaaattatg gcagaagagt tcacccaatt
     8521 aatatccaaa tcagcaggag ttgatgatat tcaaatggaa atagacgaga agtttataaa
     8581 tcgcaaaaat tcatttcgtg gttcctcttt gctgacaatc attaatagca ttgcagttac
     8641 agatttactg ggaatagttc cctatgaact ttataactcc caccgtgact ttcttaattt
     8701 aaaagagata aaactagaac atccgtcacc ttcaataaag ctttacattt cctataataa
     8761 atcttcttta aataatttgg tgttctcccg atttattgac cgtctaaatg agagtttttg
     8821 atatataact acagacagct actataactt tcatctattt attcacagcg cgaatgaaaa
     8881 ataaaacact ctgctttaca gtgtttactt tataattaac agacttatct cactgatcac
     8941 cctgtaacgt tcagagagcg tcttcagatg tctatttata aaattcctct tccgctcaat
     9001 attctggaag ctgcacgaga gcgtattacc tggacactca acaccctacc ccgcgtttgt
     9061 gtctcatttt ctggcggcaa agactctggt ttaatgctgc atctgacagc cgaacttgcc
     9121 cgacaaatgg gcaaaaaaat ctgcgttttg tttatcgact gggaggcgca attctcttgc
     9181 accattaact atgttcagtc cctgcgcgag ttgtacaccg atgtcatcga agagttttac
     9241 tgggttgcgc tcccgcttac gacgcaaaat tccctttcac aataccaacc cgaatggcag
     9301 tgctgggaac ctgatgtcga atgggtacgt caacctcccc aagatgcgat aaccgaccct
     9361 gactttttct ccttttacca gccaggcatg accttcgaac aatttgtacg tgagtttgcc
     9421 gaatggtttt cacaaaaacg tccggcggcg atgatgatcg gcatccgtgc ggatgagtcc
     9481 tacaaccgtt ttgtcgccat cgccagttta aataaacaac gttttgccga cgataaaccc
     9541 tggactacgg ccgcaccagg cggtcatagc tggtacattt accccattta cgactggaaa
     9601 gtggctgata tctggacctg gtatgcaaat catcaaagtc tctgcaaccc actgtataac
     9661 ctaatgtatc aggcaggcgt tcctctgcgt catatgcgaa tttgcgaacc ttttggcccg
     9721 gagcaacgac aaggattatg gctctatcac gttatcgaac cggatcgctg ggctgctatg
     9781 tgcgcacgag tcagcggggt aaaaagtggc agcatttacg ccggacatga caatcatttc
     9841 tatgggcatc ggaaaatcct caagccagaa catttagact ggcaagaata tgcattattg
     9901 ctgctcaata gcatgccgga aaaaacagct gagcattacc gcaataaaat cgccatttat
     9961 tggcactggt atcagaaaaa aggcatcgag gttccacaaa cccagcaagg ggacattggc
    10021 gcgaaagata tcccctcctg gcggcggata tgcaaagttt tactcaataa cgattactgg
    10081 tgtcgggcat tatcatttag tcctacgaaa gcgaagaact atcagcgtta taacgaacgg
    10141 ataaaaggaa aacgtcagga atgggggata ctatgcaaca acgattaacg caggatttaa
    10201 cgcaatttct cgccagcttg ccggaagatg atcgcatcaa agcgattaat gaaatccgca
    10261 tggcgatcca tcaggttagc ccctttcgtg aagagccagt ggattgcgtt ctgtgggtta
    10321 aaaacagcca acttatgcct aatgattaca acccaaacaa cgtggcacca cccgaaaaaa
    10381 aactgctgca aaaatccatt gaaatagatg gttttaccca acccattgtg gtcacacata
    10441 cggataaaaa tgccatggaa atcgtggatg gttttcaccg ccatgaaatt ggtaaaggct
    10501 catcatcatt aaaattacgc ttaaaaggtt atttgccggt gacctgtctg gaaggtacgc
    10561 gtaatcaacg catcgccgcg actattcgtc ataatcgcgc tcgtggacgc catcaaatca
    10621 ccgccatgtc ggaaatcgtc cgtgaactta gccagttggg atgggacgat aataaaattg
    10681 gcaaagagct gggaatggac agcgacgaag tgctgcgcct gaagcaaatt aacggcctgc
    10741 aagagctgtt tgccgaccgt caatattccc gcgcctggac ggttaaataa ctaaagctgg
    10801 cgcaggcgtt cagctgctgc cagcaacgtc gattccttct tggcaaaaca gagacgaatc
    10861 agtttatgtg ggaagggatc ggcgcaaaac accgacagcg gaatcgccgc tacgccgtgc
    10921 tcctgcgtca gccactggca aaactcaaca tcatccaggg tagaaaccgc gctgtaatcc
    10981 accagcaaaa agtatgtacc ttcacacggt aaaatctcca gccggctttc atttaaggca
    11041 tttaccagaa tatcgcgctt ctggcgataa aagtccggta acgcaagata atgctcaggt
    11101 tctgcacgta gcatatccgc aattgccagc tgtgccgggg tatttaccga aaaggtcaga
    11161 tactgatgta ccttgcgaat ttcggcactg atgggggctg gcgcaacgca ataacccact
    11221 ttccagccgg tcatatgata ggtcttgcca aacgatgaca ccgccaccgc ccgctcacgc
    11281 agctgcggat gcgccagcac actggcatgg ccctgttgtg aaaagttgat gtgctcgtag
    11341 acttcatcgc taatgacaaa aatctcgtgc ccggcgatcg cctgccacaa agcggcgaaa
    11401 tcagcctgct gccagacagt tgcactggga ttatgcggag tgttgaggat caccagtctg
    11461 gtgcgctcgc ttaacaatgc ggcaaattcc tgccagtcaa cgcgaaaatg cggtggttgc
    11521 agtgccatac gcttcactat tcccccagaa agcgcgatgg cgggggcgta actgtcatag
    11581 ctgggatcaa aacaaatcac ttcatcgcca ttgcgcacca gtgcggtaat cgccgcgtat
    11641 aacgcttccg tcgcccctgc cgttacggtg atatcgctat cggcatctag ttgatagcca
    11701 tacaaacgtt ccgttttctg agcaatcgcc tcgcgcaagg cctgcacgcc ggtcatgggc
    11761 gcgtattggt ttgccccctg ggcaacgtgg tacgccagcc gctcctgtaa atagcgcgga
    11821 ccatcaaaat caggaaagcc ttgcgacagg ttaatcgcct ggtgttgctg cgccagcgcg
    11881 ctcatctggg tgaaaatagt ggtgccaagt tgtggaagtt tgctttgtgg aatcagaggg
    11941 ttatttgtca tttttattgt acctgacgaa gttgcgtgtt gaaggcacta taacacgatg
    12001 ctagcatttg gcaatcaaga cgtttagatg tctaaataaa acaataagga caacacaaca
    12061 tgcctcacaa tcctatccgc gtggtcgtcg gcccggctaa ctacttttca catccaggaa
    12121 gtttcaatca cctgaacgat tttttcactg atgaacaact ttctcgcgcg gtgtggatct
    12181 acggcaaacg cgccattgct gcggcgcaaa ccaaacttcc gccagcgttt ggacttccag
    12241 aggcaaagca tattttgctt cgtggtcatt gcagcgaaag cgatgtacag caactggcgg
    12301 ctgagtccgg tgacgatcgc agcgtggtga ttggcgtcgg cggcggcgca ctgctcgaca
    12361 ccgcgaaagc cctcgcccgc cgtctcggtc tgccatttgt tgccgttccg acgatcgccg
    12421 ctacctgcgc cgcctggaca ccgctctccg tctggtataa cgatgccgga caggcgctgc
    12481 attatgagat tttcgacgac gccaatttta tggtgctggt ggaaccagag attatcctca
    12541 acgcgccgca acaatatctg ctggcgggga tcggtgacac gctggcgaaa tggtatgaag
    12601 cggtggtgct ggctccgcaa ccagaaacgt tgccgctaac cgtgcgactg gggatcaata
    12661 atgcgcaggc cattcgcgac gtattgttaa acagcagcga acaggcgctg agcgatcagc
    12721 aaaatcaaca gttaacgcaa tcattttgcg atgtggtgga tgctattatt gctggtggtg
    12781 ggatggtcgg tggtctgggc gatcgtttta cgcgtgtggc ggcggctcat gccgtgcata
    12841 acggtctgac tgtcctgccg caaaccgaga agtttcttca cggcaccaaa gtcgcttacg
    12901 gaattctggt gcaaagcgcc ttgctgggtc aggatgatgt gctggcgcaa ttaaccgggg
    12961 tgtatcagcg ttttcatctg ccgactacgc tggcggagct ggaagtggat atcaataatc
    13021 aggcggagat cgacaaagtg attgcccaca ccttgcgccc ggtggagtcc attcattacc
    13081 tgccagtcac gctgacacca gatacgttgc gtgcagcgtt cgaaaaagtg gaatcgttta
    13141 aagcctgacg tgcaaattta gcagcagcgc gcgccgcctt ttccaccgta gcgcgcgtcc
    13201 tgccgctcac ggaaaaactc ctcgtaggtc atcggcgttt gatcgggatg attaacccgc
    13261 atatgttcga catagttgtc gtaatcaggc ataccaatca tcagcttcgc cgcctgacct
    13321 aaatattttc cggcttttgc cagtgaatca aacatcttgg cctccgctaa ccatgttgct
    13381 gaaagagtgc cggatgcggc gtgaacgctt tatccggcct acaaatgcta tcaacgcact
    13441 cggtcagtcc cctcgcccca tcggggagag ggttagggtg agggggaacc ctcggcacta
    13501 tgccaacatt cgccaacatc cccccctcac tctgacttta gtgcgcgcct tttgcctgcg
    13561 ccacgatctc ttcaacattt tccggcattg gctcatacgg cgtttctttc gccgttggct
    13621 tcggctcttt caatgccgca agtgccgtct taatcgagaa cagtgccaga accacctcga
    13681 ccaccataaa gaagatggtt aacccggcat ccagacggtt gttgaacacc agttgcgcca
    13741 gttgtgactc agtatactgc gacggaatat tgccgctgtc gatcattact tggaacttgt
    13801 tagcaatcgc caagaagccg actttcgcat ccgggctaaa cgctttctgc cagcctgcgg
    13861 tcagggtaca aatcagcagc caggccgttg gtaccagcgc cacccaggcg taacgttgac
    13921 gtttcatctt gaacaacacc acggcacaga gcatcagcgc catccctgcc agcatctggt
    13981 tggcaatacc aaacagcggc cacagagtgt taataccgcc cagcggatcg accacgccct
    14041 gatggaggaa gtagccccac gccagtacgc acagcgccgt tgccagcagg ttagcaggca
    14101 gtgaatcggt ccgcttcagg ccaggagaca ccacgcccag cagatcctgc aacataaagc
    14161 gcgcagcacg cgtacccgca tctaccgccg tcagaataaa cagagcttca aacagaatgg
    14221 cgaagtgata ccagaacgcc acatccatca taccacccag cgcaccgtgc aggatgtaag
    14281 ccatccccac cgccaacgtc ggcgcaccgc ccgcacggga aatgatcgac tgttcaccca
    14341 cttcgctggc aatctggttg agcgtatctg gtgtaatgct aaagccccag ctactcacca
    14401 cctgcgcggc agaagcgacc acatccgccg tccctgccgg agccagcacc gccattgggc
    14461 tgttcatggc aaagtaaacg cccggatcga tgatacaggc ggaaaccagc gccataatcg
    14521 ccacgaagga ttccattaac attccaccgt agccgataaa acaagcctgc ccttcgttcg
    14581 ccagcatctt cggcgtggtg ccggaagaga tcagcgcatg gaagccagac accgcgccac
    14641 aggcgatggt gataaacagg aacgggaaca ggttaccggt ccataccggg ccagtgccat
    14701 cgacaaattt ggtcagcgca ggcatggtca gcgtcgggcg cataatcaaa atgcctaccg
    14761 ccagaccgac gatagtcccg attttcagga aggtagagag gtagtcacgc ggggccagca
    14821 gtaaccacac cggcagcacc gccgccacaa aaccgtagcc caccagcatc caggtcagtt
    14881 gcacgccggt aaagtcaaag tacggtgccc aggtcgggct ttctgccacc cagccgccag
    14941 agataatggc aaaaatcagg aacaccaggc caatcactga cacttcgcca atacgccccg
    15001 gacgcagata gcgcaggtag attcccataa aaatcgccag cggaatggtg aacgcaacgg
    15061 tatacgttcc ccacgggcta tgagtcaggg ctttcaccac gatcatcgcc agtactgcaa
    15121 ggataatgac catgatcata aagcaggcca ccagcgctat caccccggcg gttggcccca
    15181 tctcttcttt gaccagctca cccagtgagc gaccgtcacg acgcgtagaa acaaacagca
    15241 ccatgaaatc ctgcactgca ccggcgagaa ccaccccggc gagtagctag atcatccccg
    15301 gcaggtagcc catttacgct gccagcaccg gcccaaccaa cggacctgct ccggcaatgg
    15361 ccgcaaaatg gtgaccgaac agcactttct tgtccgtcgg cacatagtcc agcccgtcgt
    15421 tatggcgcac cgctggcgtc atacgcgtcg ggtcaaccgc cagcacattt ttggcaatat
    15481 acaggccata aaaacggtaa gcgatcagat agatacagac cgacgccacc acaatccaca
    15541 gcgcgttgat ctgttcccca cgatttaaag caatgtatcc cagagcaaat gctcccatta
    15601 cagagagcac tgtccagacg aggtatttcc ctgatttgtt catagttgtt atccgtgtgc
    15661 gtgtccatag agatgttaca ttttgtttct ataacatctt tgcgcaattt aacaatacag
    15721 caaccatgta aatctgagtt gaaaccaata tttaacttaa caatgttaac tcgatcactc
    15781 cgttaaccga gttttcctgc aatctcatat aattctgtcg ggttcatccc aaaactgccg
    15841 tacccagccg acaagtgcag caacgccgcc cctgttcatc gaaaacgacg atttcccagc
    15901 tctgattttg ccgcccaaga tgcagcggct ggcagacgcc gcgtaccttg ccttcagaca
    15961 ccgggcgatg atgggtggcg ttaagttccg tgcccaccac acactgcccg tcacgggtca
    16021 tcataaatcc ggccatcgat cccagcgttt cagccagcgc cgccgacgcg ccgccatgca
    16081 gcaggccaaa cagctgatga gtacgggtat caaccggcat ttcggcttcc agcacatcat
    16141 cgcccagacg ggtatacaca attcccagat gcgccaccat tgtgttatcg ctggtggcgt
    16201 tcagttcttc gagcgttaaa tggcgtttcc agatcatgct tatgccccca gcgttgagcc
    16261 gccatcgacc acaatatcct gtagggtgat atggctggcg aggtcagagg cgaggaacaa
    16321 aatcgtgttg gcgatctctt gtggacgggc gattttcccc agcggaatgc cgagtttaaa
    16381 ctgctcgcca aagccgcgaa tacgctgttc ttcggcgtca tcgctcaccc acagcgtgcg
    16441 ttgcatatcg gtgtcggtgg agccaggcga aaccacatta cagcgcacgc cgctacccgc
    16501 cagttccagc ccgacgctca acgccaggct tttcagcgcc gctttcgatg cgccataagc
    16561 actcatacca atacgcggcg tgtgcgcggc gtcggacgcc acagtgacaa tcgccccgcc
    16621 ccgctgacgg cgaaactggt tcatggtttg ctgaaacagg ttaaacgcac cgccgacgtt
    16681 aaccgcaaaa gtctgctgcc agtcctcttt gctcagttgg tctgtcgcgc ccatgcgtaa
    16741 aattcccgcc gcattgacca gcgcgtccaa tcgctccgtt tcagctaaca gttgctgaca
    16801 cacttgcgcg acctgcgcag cgtcggcaac atccatcact tcggtcgcaa agggatattg
    16861 ctcctgagtg aacgcttgat caaaacctgt aactttcgct ccagcctcaa caaatgccag
    16921 cgccgtggcg tagccgatac ctttccccgc gccagttacc cagacatttt taccgctgaa
    16981 atccattatt tcacctcacg cagcgccgct ttgctggcgg ggccaggtgc tggcagtaat
    17041 tcttcggtca tcaccacccg gccagaacgt ccggccacat atttcagcga catcaaatgc
    17101 tcgtcacggc tgaaatcggc cagcgcatcc gccaccataa acggtttaat atcgcgcata
    17161 aatgcgtcgg ttgcggtggt catacagcca atgtgggcat atacccctgt aataatcagc
    17221 tggttacgtc cactctcttt gagcatttgc tccagcggag aacgatgaaa cgcgctgtag
    17281 cgccacttca ccagcaccgt gtcgtcggca tctggcgtca ggcgatccac caccttttgc
    17341 tgttccggcg aacgggtcag gcccggcccc cacatatcat tcaacagcgc ccgatcttca
    17401 tcgctctgct ctttcggctg ggcggtgtaa taaaccggga tattgtgctg tttgcagtag
    17461 tcgcgcagcg cagcaatatt ggcgatcact tgctccatca tcgggcagtt ctcgccccag
    17521 aagctgacaa aatagtcctg catatcatgg attaacaacg cggcacgttg cggttcaaag
    17581 gcccagtcaa ctttattctg cggaatatcg tgaggctccg gcagtgcgta agcctgtaat
    17641 tttggaatag ccatcgtgtt ctctccttca ggctgatgcg cgtgacgcca gccactgacg
    17701 taattgtttt ttatcgactt tcccgaccgc cgtcagagga agtgaatcca cacactccac
    17761 gcgatccggt aatttaaatt cggcaatacc ctgttcacgc aggaaacgac gcacctgcac
    17821 cgcgcgcagc ggctctttta ccaccagata agcgcagctt ttttcgccca tcagctcatc
    17881 ttccatgctc accagtgcgg cgtagatcac cgccgggtgg cgcagcagca ggttttcgat
    17941 ctcttcggca gcgatcttct caccgccacg gttgatctga tctttctcgc gcccctgcac
    18001 ggtgatgtac ccctctggat caatagagat cagatcgccg gaacagtaaa aaccgttggc
    18061 atcaaaggcg ctggcattgt gctgcgggct tttgtaatag ccacggaagg tgtacggacc
    18121 gcgggtcatc aggcgtccaa cttccccttg cggcagtgga tttccttcgg catcggcaac
    18181 ccacacttca tcgtccggac acattgggta accctgggta tgaataattt tctccgcgct
    18241 atcatcaagt cgggtgtagt tcaccagccc ttccgccatg ccaaacacct gctgcaactg
    18301 gcagccaatc tcagcgggaa tacgcgccgc aagggtggca gaaagacgtg cgccgccgac
    18361 ctgtaacagt ttcagcgagg caagctgcgc ccggctttcg ccttcagcca gcgcctgcaa
    18421 ccacaggctg actgccggcg gcaccagcgc ggtaacgtta acctgatgtt ttgcaatcaa
    18481 cgggaagcaa agcgtggcgc tgggatcggc cgccagaaca accgttcctc cggcaagaaa
    18541 gacgcccagc gatcctggcg aactcatagc gtagttatga gccgccggga tcgcgcacag
    18601 gtagcgcgtc tgttgtgtga actgacaaat ctcgacgcta cgacgcacgc tgtagtaata
    18661 gtcgttatga gtgcgcggga tcaatttcgg tgtgccggtg gtgccagtgg tgccgccgga
    18721 aagctggaaa taggccactt catcagcagg tgatggcgtg gcagtaaaac cctctgccgg
    18781 atggttaatc gcatcctgca agttatgctc accgctgtcg ttgtgcagtt gcaccacgcg
    18841 aatggaagaa tgctctgcaa caaatgtgtt gaggaaatca tccccgctaa atagcgcatg
    18901 ctggcgatcg gcaatcagta acgccggttc aatctggctg gcgtaggcgt tcagttcact
    18961 acgctgatgg ctgaacagcg ccagcaccgg cgcgacgccc agtttcagca gcgcgaaaaa
    19021 ggtaatgtaa agttcagcga cgttacccag ttgtaccagc gcggtttcac caggtttaat
    19081 gccctgacgg cgcaaactac aagcgaggtt atccgccgcc tgattcagct cccgataact
    19141 caactgccgc tcgccgtcga taaccgcgat gctatcactc gcagcgtggc gagtcagaat
    19201 gtcggtcagt ggcaaatcct gccagtagcc tttttcccga tagcgacggg caaactcttc
    19261 cggccagcgg gtgaatggaa tgctcatcct cgctccttaa tgcaatccaa aaacattcaa
    19321 catagtagaa agtttgacgc ctgtttcgcg ccactcaccc aacggtgacg acgcaggcac
    19381 aatccccgct ccggcaaaca gacgcacctg attttcccgc agcttcgcgc agcggatggt
    19441 caccccccat tcgccgttac cttcgctgtc acaccaaccc acaatgccgc caaacagttc
    19501 gcggtcaaac ggctccagtt cagcaataac ctgggtcgcg gcctgatgcg ggaaaccgct
    19561 cagcgcgggg ggcggatgca gcagacaggc cagagtcagt gcgttttctt gcgaattcgc
    19621 tttaccttca aagggagttg cgagatgcca cagcgtcggc gtggtaatca attgtggaga
    19681 ggagggaacg tgtaactcac tactgcgttc gcgcagtacc tctttcatcg cctgagtcac
    19741 cagttcatgt tcatggcgat ctttttctga cgccagcaga cgattacccg cttcgcgatc
    19801 gagcacttca tccggctgac gacgcgcgga accggctaac ggaatggagc taaaacgctc
    19861 gccgtcttta cgtagcagca gttccgggct ggcccccagc aggacgccac catcagccag
    19921 cgggacatgg aagttgtaac taaccgggtt ttgcgcaatc aaccgttcca gcaatacgcc
    19981 actatcaatg gcggcgtcag tggtgatatc aatcaaccgt gacaacacca ctttgtcgac
    20041 ctgcggcgtg gcggtaagtg cggcagcgcg agcaaccatc tgttcaaacg tggtttgttc
    20101 aggaattgcc tggcgttcca ccacgttcag cgactggctg cgggtaaaac ggcgggctga
    20161 ggtctgtttt tcctagcggg agaacgactg ccaggattcg ggaatataca gcgacgaagg
    20221 ctgacgtgga tcgaagggaa tcgccccaac catcaccgga tttttaatgc cctgagcttt
    20281 ggcatcggca aacagcgcgg cgagtttttg ctggaaggga ctgtcgggcg aatcgccgtt
    20341 cacagccggt tcatcgaagc gggcgaaaca tcctgacgtc gtaaaactgc ggtacggcga
    20401 cataaagaaa aagcgattgg gcgcaagtgt tgccatggtc tgctgtactt cctcagccag
    20461 tgacgtatcc atatcacccc cacaaaatga taaaggcttt aataaagatt atcatttata
    20521 ttttcggtcg ctaacctaaa agcaaacgcg cactatgtca actcttgagg taacgcaatc
    20581 tgcaactcgg agttgcatct ggttgtggtt acaatgaaaa tgagaagcat tattgatgaa
    20641 ttcgcataag cgcaatgtga tgtcctgcgc cgttctaccc cctctccctt ccagggagag
    20701 ggctggggtg agggtcaata ttcgcaccag tgctggctgt tcccctcacc ctacccctct
    20761 ccccaaaggg gcgaggggac ggatagtgcg ctttgtcgaa tttgtcatta cgcccttaac
    20821 cttattaata acaggaagct gatttgtgag acttgccccg ctctaccgca acgcccttct
    20881 attaacagga cttttgcttt caggaatagc cgcagttcag gccgctgact ggccgcgtca
    20941 gattactgac agccgtggca cacataccct ggaaagccag ccgcagcgta ttgtttccac
    21001 cagcgtcacc ctgaccggat cactgctggc gattgatgct ccggtgatcg ccagcggcgc
    21061 gaccacgccg aataaccgcg tcgcagatga ccagggcttt ttacgccagt ggagcaaggt
    21121 ggcgaaagaa cgcaaactgc aacggctcta tatcggcgaa ccgagcgccg aagccgttgc
    21181 cgcgcaaatg ccggatctga ttttaattag cgcaaccggc ggtgattcgg cgctggcgct
    21241 gtatgatcag ctttccacca tcgccccgac attaatcatc aattacgacg acaaaagctg
    21301 gcagtcgctg ttaacgcagc ttggcgaaat taccggacat gagaaacaag cggcagagcg
    21361 gattgcacag tttgataagc aactggcagc ggcgaaagag caaatcaaat taccgccgca
    21421 gccggtcact gccattgtct ataccgccgc tgcacacagt gccaatctct ggacgccgga
    21481 atcagcacaa gggcagatgc tggaacaact cggctttacg ctggcgaagt tgcccgcagg
    21541 gttaaacgcc agccaaagcc agggcaaacg ccatgacatc attcagcttg gtggggaaaa
    21601 tctggctgcg gggttaaacg gtgaatcgct attcctgttc gctggtgatc agaaagatgc
    21661 caatgcgatt tatgccaatc cactgctcgc gcacctgcct gcggtacaaa acaagcaggt
    21721 ttatgcgctg ggaaccgaga cgttccgcct ggattactac agcgccatgc aagtgctgga
    21781 acggcttaag gcgctgtttt aagcattaac tgtcggacgc tgtcacctgc ggcggcgtct
    21841 ggcgaaaacg tcgcaactcc accagcacca gcaataacaa cacgccgata atcaacaaac
    21901 caaaaccgct cgcgcttgcg gaagcaaccg gtgtcatcat cgcgcccaaa ccacccagca
    21961 gcgccgcgcc tatggcatcg cccgtcacgt tctgcgccgt ccacaaaccg ttaatccgcc
    22021 ctaacatcgc ttccggggtt tgcgtttgca gcattgtata ttgcagcaac gaactaaccg
    22081 cgctcagcca gccgaacagc gccagacaaa ccacgcctaa aatccacatc ggcatcaggc
    22141 caaacagacc aatggcgagg aacgatccca gcgtggagag cagcatcaat aaccctggtc
    22201 gcgcactatg tgccagcttc ccgctggtta acgcaccaat agccgcgccg agcgggatcg
    22261 ccgcgtagag aaaaccaatc tgtgccgctg acatctgcca gttgtcagcc agcgccggat
    22321 acagtacccg caccgcgctc gccatcgtca ataaaccacc cagcagcgca atccctccta
    22381 ccagcgggct ggcgagcaga aaacgaaatc ctgccagtaa tgatttcaac ggatgctcac
    22441 gcggctgcgg tggcggtggc aacgccggaa ggcttaacaa cggtagcaag gtaataaacg
    22501 tgcccgccgc cgccagcccg tagttccagg ctacgccacc ggtcgccagc aataaaccgc
    22561 caatcatggg cgaaatcacc gaccccagac gcacggtcaa catggtgatc gccccggcct
    22621 gcattaagtt ttcacgccct accagtgctg gtgtcgccgc caatagcgcc gtaacgccaa
    22681 gcgatgcgaa aaaaccatcc cataaaccaa gtaaatagat tgccagcaat gacggctccg
    22741 gcagcagtgc attaaggcac agtccaatga agccaatgcc acaggtgccg cgcgccagca
    22801 aaatcacttt tttgcgctca tagcgatccg ccagcacacc gccaaccatc aggccaacaa
    22861 acatcgcgcc gccggtcagc gtcaccgaaa gccccacctg ccaggtagaa tgcgtcatca
    22921 tctggat
//
LOCUS       DAJVTL010000065        22034 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.065, whole genome shotgun sequence.
ACCESSION   DAJVTL010000065 DAJVTL010000000
VERSION     DAJVTL010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22034
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.065"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1148)
                     /locus_tag="OQQ26_002409"
     CDS             complement(<1..1148)
                     /locus_tag="OQQ26_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HCS1857839.1"
                     /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQ
                     AYEEALRITQSPAKSVWQPEENELAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY
                     CSMDEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENTGEIDEEELESFLYAI
                     AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKL
                     HRNLLRWYSAGRLDIPELLDYAQSWRETEPDNEDAPYYEYAQRVYCGEGESLVAELCD
                     YWREYPSTQADALMLQWCRQHRVDYYPLVVMMIEARELVNDQGKPLLYIPGDSARTRF
                     HLYEILSDEKLSALGCSLVEMVLHKGRKPRISLTRDTEHPLWPLYLVA"
     gene            complement(1145..1852)
                     /locus_tag="OQQ26_002410"
     CDS             complement(1145..1852)
                     /locus_tag="OQQ26_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HCS1857840.1"
                     /translation="MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS
                     WGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV
                     ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
                     YFAGYTFGRQYWQSPEDDNLQLLREFLARKEYDDSGNHMFYQLFASDDAYYPTLSWQP
                     LAYYSACPETLKDMSDL"
     gene            2017..2994
                     /locus_tag="OQQ26_002411"
                     /pseudo
     CDS             2017..2994
                     /locus_tag="OQQ26_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415177.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
     gene            complement(3064..3546)
                     /locus_tag="OQQ26_002412"
     CDS             complement(3064..3546)
                     /locus_tag="OQQ26_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HCS1857841.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
                     EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
                     "
     gene            3781..6363
                     /gene="leuS"
                     /locus_tag="OQQ26_002413"
     CDS             3781..6363
                     /gene="leuS"
                     /locus_tag="OQQ26_002413"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HCS1857842.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
                     DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
                     NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKT
                     MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
                     ELAAFIDECRNTKVAEAEMATMEKKGVDTSFKAVHPLTGEEIPVWAANFVLMEYGTGA
                     VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
                     EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
                     PVILPEDVVMDGITSPIKADPEWAKTTVNGIPALRETDTFDTFMESSWYYARYTCPQY
                     KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
                     GMVLADAFYYVGKNGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
                     NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
                     KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
                     TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
                     STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
                     LVVG"
     gene            6378..6959
                     /gene="lptE"
                     /locus_tag="OQQ26_002414"
     CDS             6378..6959
                     /gene="lptE"
                     /locus_tag="OQQ26_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HCS1857843.1"
                     /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
                     GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
                     TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
                     SIRAADIRSDEEQTSTTTDTPATPARISTTLGN"
     gene            6959..7990
                     /gene="holA"
                     /locus_tag="OQQ26_002415"
     CDS             6959..7990
                     /gene="holA"
                     /locus_tag="OQQ26_002415"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HCS1857844.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
                     QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
                     LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL
                     ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRGMMGEALNRLSQPQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK
                     PLADVFIDG"
     gene            7992..8633
                     /gene="nadD"
                     /locus_tag="OQQ26_002416"
     CDS             7992..8633
                     /gene="nadD"
                     /locus_tag="OQQ26_002416"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HCS1857845.1"
                     /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP
                     HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRHEQGPDVPL
                     AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPED
                     LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
     gene            8657..9268
                     /locus_tag="OQQ26_002417"
     CDS             8657..9268
                     /locus_tag="OQQ26_002417"
                     /EC_number="3.1.3.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
                     /protein_id="HCS1857846.1"
                     /translation="MRLWLIRHGETQANVDGLYSGHAPTPLTARGIAQAQNLHTLLDD
                     VSFDLVLCSELERAQHTARLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLMQEDAEN
                     YSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEYQHYQNILIVSHQGVLSLLIARL
                     IGMPAESMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVENA"
     gene            9528..9845
                     /gene="rsfS"
                     /locus_tag="OQQ26_002418"
                     /gene_synonym="rsfA"
     CDS             9528..9845
                     /gene="rsfS"
                     /locus_tag="OQQ26_002418"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007373852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HCS1857847.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            9849..10316
                     /gene="rlmH"
                     /locus_tag="OQQ26_002419"
     CDS             9849..10316
                     /gene="rlmH"
                     /locus_tag="OQQ26_002419"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HCS1857848.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIITLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            10347..12248
                     /gene="mrdA"
                     /locus_tag="OQQ26_002420"
     CDS             10347..12248
                     /gene="mrdA"
                     /locus_tag="OQQ26_002420"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HCS1857849.1"
                     /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
                     DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
                     SGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
                     PAVAAAEDH"
     gene            12251..13363
                     /gene="mrdB"
                     /locus_tag="OQQ26_002421"
                     /gene_synonym="rodA"
     CDS             12251..13363
                     /gene="mrdB"
                     /locus_tag="OQQ26_002421"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HCS1857850.1"
                     /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
                     SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            13374..14462
                     /gene="rlpA"
                     /locus_tag="OQQ26_002422"
     CDS             13374..14462
                     /gene="rlpA"
                     /locus_tag="OQQ26_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HCS1857851.1"
                     /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
                     GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
                     PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
                     NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTNSVSGPQGDILP
                     VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA
                     MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
                     FASKAEASTLQQRLQTEAQLQSFITTAQ"
     gene            14602..15813
                     /gene="dacA"
                     /locus_tag="OQQ26_002423"
     CDS             14602..15813
                     /gene="dacA"
                     /locus_tag="OQQ26_002423"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HCS1857852.1"
                     /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI
                     DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
                     REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRM
                     KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            15923..16186
                     /locus_tag="OQQ26_002424"
     CDS             15923..16186
                     /locus_tag="OQQ26_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HCS1857853.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
                     PTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL"
     gene            16287..16928
                     /gene="lipB"
                     /locus_tag="OQQ26_002425"
     CDS             16287..16928
                     /gene="lipB"
                     /locus_tag="OQQ26_002425"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415163.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HCS1857854.1"
                     /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV
                     TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKISQWKPEATTNNIEPRLLENILALLNNPDFEYITA"
     gene            17188..18141
                     /locus_tag="OQQ26_002426"
     CDS             17188..18141
                     /locus_tag="OQQ26_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HCS1857855.1"
                     /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHK
                     GIVNAAKVLNLPPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES
                     ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL
                     SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL
                     PEGQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP
                     LEKLPFPSLNEEQIDFSIHYNKFSLRDPTLHGVIDVIRNAF"
     gene            18350..19315
                     /gene="lipA"
                     /locus_tag="OQQ26_002427"
     CDS             18350..19315
                     /gene="lipA"
                     /locus_tag="OQQ26_002427"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HCS1857856.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
                     PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRHHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(19416..19619)
                     /gene="tatE"
                     /locus_tag="OQQ26_002428"
     CDS             complement(19416..19619)
                     /gene="tatE"
                     /locus_tag="OQQ26_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HCS1857857.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
                     DDDAAAKKGADVDLQAEKLSHKE"
     gene            complement(19748..20530)
                     /locus_tag="OQQ26_002429"
     CDS             complement(19748..20530)
                     /locus_tag="OQQ26_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
                     /protein_id="HCS1857858.1"
                     /translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
                     CDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAG
                     NIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELAQALQ
                     GAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPFGV
                     TIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL"
     gene            20623..21006
                     /gene="crcB"
                     /locus_tag="OQQ26_002430"
     CDS             20623..21006
                     /gene="crcB"
                     /locus_tag="OQQ26_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HCS1857859.1"
                     /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIG
                     AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VFVNLLGSFAMTALAFWLFSASTAH"
     gene            complement(21060..21269)
                     /gene="cspE"
                     /locus_tag="OQQ26_002431"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(21060..21269)
                     /gene="cspE"
                     /locus_tag="OQQ26_002431"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HCS1857860.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVIAL"
     gene            complement(21444..22004)
                     /gene="pagP"
                     /locus_tag="OQQ26_002432"
     CDS             complement(21444..22004)
                     /gene="pagP"
                     /locus_tag="OQQ26_002432"
                     /EC_number="2.3.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) palmitoyltransferase PagP"
                     /protein_id="HCS1857861.1"
                     /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQ
                     PEHYDLYIPAITWHARFAYDKEKTDRYNERAWGGGFGQSRWDEKGNWHGLYAMAFKDS
                     WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP
                     VTFQMTYIPGTYNNGNVYFAWMRFQF"
BASE COUNT         5618 a         5537 c         5465 g         5414 t
ORIGIN      
        1 ttggcaacta aatataatgg ccataaggga tgttctgtat cacgcgtgag tgagatccgc
       61 ggcttacgtc ctttgtgcaa aaccatctcg accagtgaac accccagagc agagagtttt
      121 tcatcgctga gtatttcgta taaatgaaaa cgcgtacggg cgctgtcgcc ggggatataa
      181 agtagcggtt ttccctgatc gttaaccagt tcacgagctt caatcatcat caccactaac
      241 gggtaataat cgacccgatg ctgacggcac cattgcaaca ttaaagcatc cgcctgggtg
      301 gaggggtact cgcgccagta gtcacaaagt tctgccacca ggctttcgcc ttctccacaa
      361 tagacgcgtt gcgcgtattc ataataaggc gcatcttcat tatcaggttc agtttcccgc
      421 catgactggg cgtaatccag aagttcgggg atatccaggc gacctgcgct ataccagcgg
      481 agtaaatttc tgtgcagttt tgcatcatcg gggataatca ctgcgcgatg ttgcgctaaa
      541 tacaatgtca gccattctgg atgcgatgac caaatccgag cgaacatttg gtaaaaatcg
      601 atggtgtcat tttgcacggc aacgggcaga tgcagaatgg tctggaagtt aaaaacattc
      661 cccttcgcaa tggcatataa aaaggattcc agttcttctt cgtctatttc cccggtattt
      721 tcctcctgta accaccgcaa tctttctgct aataacacca cgcactcgaa ggataaatgg
      781 gcagtgttca tggctattgt gcacagcgac cagcgtaatt catcaatctc atccatcgag
      841 caataattta attgctgaat gaatcgctgc caggcggagg gcagaaaacg ttcactatca
      901 gaggcaagta acgcacgaaa ggcgagcaga atttcatgtt ctgcaagttc attttcttct
      961 ggttgccaaa cagatttagc aggcgactgc gtaatccgta gcgcctcctc atacgcctga
     1021 cgaagttgtt taaaaccctg cggatcggtt tctggatgaa aggacggtaa cagcgccaga
     1081 taagcgcggc ggataatatc gacgtcagtc gtttcctcta tatcgaggat cttccagcaa
     1141 tttttcatag gtcgctcata tccttaagcg tttccgggca tgcagaatag taagccaatg
     1201 gttgccagga caaggtaggg taatacgcat catcactggc aaataattga taaaacatat
     1261 gatttccgga atcgtcgtat tctttacgcg ctaagaattc acgtaataac tgcagattat
     1321 catcctcggg agactgccaa tattgccgac caaaggtata accggcaaag tattgccgcc
     1381 agttactata ataacgtaga gcccgtagat gaatgcgcga ctggatccat agactttctt
     1441 cttcactcaa ccagttatta agtacgccca ttcggcttaa aaaacccata cggacataat
     1501 cccaggcttt aattcctccc tcaccacagc attcggcggt gctggcgaca aattgcgcat
     1561 aagcctgacc ttgctcattt agttcagcaa gatagtcacg ccattcacat ggtgaataac
     1621 gaaaccagcg gtgataaaac cctgccaacc gagcggcatg accgttatcg atcattcggt
     1681 gaattgtgcg cagcaggtca tcacggtcat caattcccca tgaggaagaa aggtcaaaaa
     1741 agcatgtacc taaatacatt ttgggtgatg aatgcgaagg taaacagcat tcattgcgta
     1801 tttccatcgg agtggaaagt gcaaacaata ttttttgcga ctccatgtcc atataattta
     1861 tccttaaata ttcattaaat gaatattagc cgcattgcga cgctcgttta tttatacttt
     1921 tctgacgcga cataatacgc ataaaataag gcttgcgcaa aaaatggaac acataaaaat
     1981 tcaatatatt ttatctacaa tcataaggaa atgataatga ttttcacgtc aagttgctgc
     2041 gataatttat caatagatga gattatcgaa cgtgctgaaa aaggcgattg cgaggctcaa
     2101 tatattgttg ggttttatta taatcgcgat agcgcaattg attctccgaa cgacgaaaaa
     2161 gccttttact ggctgaagct ggccgcctag caaggtcatt gtgaagcaca atattcctta
     2221 ggacaaaagt atactgagga taaaagccgt cataaagata atgagcatgc catcttttgg
     2281 ctgaaaaaag ctgccctaca aggccatact ttcgcttcca acgcccttgg ctggatactg
     2341 gatcgtggag aagaccccaa ttataaagaa gcgattgtct ggtatcagat agccgcggag
     2401 agcggaatgt cttatgcgca aaataatctt gggtggatgt acagaaatgg caacggagtc
     2461 gcaaaagact atgcgctggc atttttctgg tacaaacaag ctgcattaca aggccatagt
     2521 gacgcgcaaa acaatctggc cgatctttat gaagacggaa aaggcgttgc tcaaaacgag
     2581 acactcaccg cattctggta tttgaaaagc gcacagcagg gtaatcggca tgctcagttt
     2641 caaattgcat gggattataa cgctggcgaa ggggtggacc aggactataa gcaagcgatg
     2701 tactggtatc tgaaggctgc cgctcagggg agcgtcggcg cttacgtcaa catcggttat
     2761 atgtataaac acggacaagg cgttgagaaa gattatcagg ctgcctttga atggtttacg
     2821 aaagccgctg aatgcaatga cgccactgcc tggtataacc tggccattat gtatcactac
     2881 ggagaaggaa gacctgtcga tctccgacag gctctcgacc tgtatcgtaa agttcagtca
     2941 tccggaacca gagatgtcag tcaggaaatt cgtgagactg aagatttact gtagagataa
     3001 aaacaagggc cggggaattt cattcggccc atattctctt tattgctgtg cgaaatcaga
     3061 ctattacggc tcaaacgggc gtctctggaa ctggtcatga ccacatttcg ggcatagcgt
     3121 cagcacttcc ggtgtgtaga tcgggagatg gaagtgacat ttctcgcaga ccagatttcc
     3181 cagccctacc acttctccgc tgtgataaac cccatgatga ttgaggtcct ggaaaacttc
     3241 gcgccattcc agctgcgttt tatcggtgat gtctgccagc tcctgccata agctttcttt
     3301 aatcacccgc ataaagacgc tgtcagattc ttctttcagg ctctcttcat agctcatggc
     3361 gaactcttcc aggtcacgtc tgacagctcg cgtcagctca tcgacctcgg ttcgcgttaa
     3421 ctcccctgtt tttattacgc gctcgcgcgc ctgttccacc agtgcgtcga tatcacgttc
     3481 gccattgcgc aggcgttcgc tcagtgacgc gaccagttca cggtaatatt gagcaacctt
     3541 gttcatcgtt tcatctcccg ggtcgttaac tgactataat aatagacgtt ctttgttcct
     3601 tgctttgcta atacgcccac aaactctgta aattaatgta cgaataatcc gggcatcatt
     3661 tcaacgtcga gtgcgcgaaa ggctgttttg acgcggacgt ttgggctatg ctatgcggat
     3721 ctgaaaaacc acctcaacgc tacatttgta gccgtattga aaacaggacc actggctgcc
     3781 atgcaagagc aataccgccc ggaagagata gaatccaaag tacagcttca ttgggatgag
     3841 aagcgcacat ttgaagtaac cgaagacgag agcaaagaga agtattactg cctgtctatg
     3901 cttccctatc cttctggtcg actacacatg ggccacgtac gtaactacac catcggtgac
     3961 gtgatcgccc gttaccagcg tatgctgggc aaaaacgttc tgcagccgat cggctgggac
     4021 gcgtttggtc tgcctgcgga aggcgcggcg gtgaaaaaca acaccgctcc ggcaccgtgg
     4081 acgtacgaca acatcgcgta tatgaaaaac cagctcaaaa tgctgggctt tggttatgac
     4141 tggagccgcg agctggcaac ctgtacgccg gaatattacc gttgggaaca gaaattcttc
     4201 accgagctgt ataaaaaagg cctggtatat aagaagactt ctgcggtcaa ctggtgcccg
     4261 aacgaccaga ccgtactggc gaacgaacaa gttatcgacg gctgctgctg gcgctgcgat
     4321 accaaagttg aacgtaaaga gatcccacag tggtttatca aaatcactgc ttacgctgac
     4381 gagctgctca acgatctgga taaactggat cactggccag acaccgttaa aaccatgcag
     4441 cgtaactgga tcggtcgttc cgaaggcgtg gagatcacct tcaacgttaa cgactatgac
     4501 aacacgctga ccgtttacac tacccgcccg gacaccttta tgggttgtac ctacctggcg
     4561 gtagctgcgg gtcatccgct ggcgcagaaa gcggcggaaa ataatcctga actggcggcc
     4621 tttattgacg aatgccgtaa caccaaagtt gccgaagctg aaatggcaac gatggagaaa
     4681 aaaggcgtcg atactagctt taaagcggtt cacccattaa cgggcgaaga aattcccgtt
     4741 tgggcagcaa acttcgtatt gatggagtac ggcacgggcg cagttatggc ggttccgggt
     4801 cacgaccagc gcgactacga gtttgcctct aaatacggcc tgaacatcaa accggttatc
     4861 ctggcagctg acggctctga gccagatctt tctcagcaag ccctgactga aaaaggcgtg
     4921 ctgttcaact ctggcgagtt caacggtctt gaccatgaag cggccttcaa cgccatcgcc
     4981 gataaactga ctgcgatggg cgttggcgag cgtaaagtga actaccgcct gcgcgactgg
     5041 ggtgtttctc gtcagcgtta ctggggcgcg ccgattccga tggtaacgct ggaagacggt
     5101 accgtaatgc caaccccgga cgaccagctg ccggtgatcc tgccggaaga tgtggtgatg
     5161 gatggcatta ccagcccgat taaagcagat ccggagtggg caaaaactac cgttaacggt
     5221 attccagcgc tgcgtgaaac cgacactttc gacaccttta tggagtcctc ctggtactat
     5281 gcgcgctaca cttgcccgca gtacaaagaa ggtatgctgg attccgaagc ggctaactac
     5341 tggctgcctg tggatatcta cattggtggt atcgaacacg ccattatgca cctgctctac
     5401 ttccgcttct tccacaaact gatgcgtgat gcaggtatgg tgaactctga cgaaccagcg
     5461 aaacagttgc tgtgtcaggg tatggtgctg gcagatgcct tctactatgt tggcaaaaac
     5521 ggcgaacgta actgggtttc cccggttgat gctatcgttg aacgtgacga gaaaggccgt
     5581 atcgtgaaag cgaaagatgc ggcaggccat gaactggttt ataccggcat gagcaaaatg
     5641 tccaagtcga agaacaacgg tatcgacccg caggtgatgg ttgaacgtta cggcgcggac
     5701 accgttcgtc tgtttatgat gtttgcttct ccggcggata tgactctcga atggcaggaa
     5761 tccggcgtag aaggggctaa ccgcttcctg aaacgtgtct ggaaactggt gtacgagcac
     5821 acagcaaaag gtgatgttgc ggcactgaac gttgatgcgc tgactgaaga tcagaaagcg
     5881 ctgcgtcgcg atgtgcataa aacgatcgct aaagtgaccg atgatatcgg ccgtcgtcag
     5941 accttcaaca ccgcaattgc ggcgattatg gagctgatga acaaactggc gaaagcaccg
     6001 accgatggcg agcaggaccg cgccctgatg caggaagcgc tgctggccgt tgtccgtatg
     6061 cttaacccgt tcaccccgca catctgcttc acgctgtggc aggaactgaa aggcgaaggt
     6121 gatatcgaca acgcgccgtg gccggttgct gacgaaaaag cgatggtgga agactccacg
     6181 ctggttgtgg tgcaggttaa cggtaaagtc cgtgccaaaa tcaccgttcc ggtggatgca
     6241 acggaagaac aggttcgcga acgtgctggc caggaacatc tggtagcaaa atatcttgat
     6301 ggcgttactg tacgtaaagt gatttacgta ccaggtaaac tcctcaatct ggtcgttggc
     6361 taagcgcggg aggaagcgtg cgatatctgg caacattgtt gttatctctg gcggtgttaa
     6421 tcaccgccgg gtgtggctgg catctgcgtg ataccacgca ggttccttcc actatgaagg
     6481 tcatgatcct ggactcaggc gatccgaacg ggccattaag ccgtgcggta cgtaaccagt
     6541 tacgtctgaa tggtgtcgag ttgcttgata aagaaaccac gcgtaaggat gttccgtccc
     6601 tgcgtctggg taaagtgagc atcgcaaaag ataccgcatc ggtattccgt aacggtcaaa
     6661 cagcagagta tcagatgatc atgacggtta atgcgaccgt gttgatcccc ggccgtgata
     6721 tctacccgat tagcgccaaa gtcttccgtt cgttcttcga taacccgcaa atggcgttag
     6781 cgaaagataa cgaacaagac atgatcgtaa aagagatgta cgaccgtgct gccgaacagc
     6841 tgattcgtaa gctgccaagc atccgtgctg cggatattcg ttccgacgaa gaacagacgt
     6901 cgaccacaac ggatactccg gcaacgcctg cacgcatctc caccacgctg ggtaactgat
     6961 gattcggttg tacccggaac aactccgcgc gcagctcaat gaagggctgc gcgcggcgta
     7021 tcttttactt ggtaacgatc ctctgttatt gcaggaaagc caggacgctg ttcgtcaggt
     7081 agctgcggca caaggattcg aagaacacca cactttttcc attgatccca acactgactg
     7141 gaatgcgatc ttttcgttat gccaggctat gagtctgttt gccagtcgac aaacgctatt
     7201 gctgttgtta ccagaaaacg gaccgaatgc ggcgatcaat gaacaacttc tcacactcac
     7261 cggacttctg catgacgacc tgctgttgat cgtccgcggt aataaattaa gcaaagcgca
     7321 agaaaatgcc gcctggttta ctgctcttgc gaatcgcagc gtgcaggtga cctgtcagac
     7381 accggagcag gctcagcttc cccgctgggt tgctgcgcgc gcaaaacagc tcaacttaga
     7441 actggatgac gctgcaaatc aggtgctctg ctactgttat gaaggtaacc tgctggcgct
     7501 ggctcaggca ctggagcgtt tatcgctgct ctggccagac ggcaaattga cattaccgcg
     7561 cgttgaacag gcggtgaatg atgccgcgca tttcacccct tttcattggg ttgatgcttt
     7621 gttgatggga aaaagtaagc gcgcgttgca tattcttcag caactgcgtc tggaaggcag
     7681 cgagccggtt attttgttgc gcacattaca acgtgaactg ttgttactgg ttaacctgaa
     7741 acgccagtct gcccatacgc cactgcgtgc gttgtttgat aagcatcggg tatggcagaa
     7801 ccgccggggc atgatgggcg aggcgttaaa tcgcttaagc cagccgcagt tacgtcaggc
     7861 cgtgcaactc ctgacacgaa cggaactcac cctcaaacaa gattacggtc agtcagtgtg
     7921 ggcagagctg gaagggttat ctcttctgtt gtgccataaa cccctggcgg acgtatttat
     7981 cgacggttga tatgaaatct ttacaggctc tgtttggcgg cacctttgat ccggtgcact
     8041 atggtcatct taaacccgtg gaaacgctgg cgaatttgat tggtctgacg cgggtcacaa
     8101 tcatccctaa taatgttcct ccgcatcgtc cccagccgga agcgaacagc gtgcagcgta
     8161 aacacatgct tgaactggcg attgccgaca agccattatt tactcttgat gaacgcgagc
     8221 taaagcgcaa tgccccctct tacactgcgc aaacactgaa agagtggcgg catgaacaag
     8281 ggccggacgt gccgctggcg tttattattg gtcaggattc attgctgacc tttccgacct
     8341 ggtacgaata cgaaacgata ctcgacaatg cacatttgat cgtctgtcgg cgtccaggtt
     8401 acccacttga aatggcgcaa ccgcaatacc agcaatggct ggaagatcat ttgacacata
     8461 acccggaaga tcttcacctt cagcctgccg gtaaaattta tctggctgaa acgccgtggt
     8521 ttaacatctc ggcgaccatc atccgcgaac gtttgcaaaa cggtgaatcg tgtgaggatt
     8581 tattgccgga accggtattg acttacatta accaacaagg cttgtatcgc tgatacctat
     8641 cgttacggag ggcatgatgc gactgtggtt aattcgtcat ggcgaaacac aagcgaatgt
     8701 cgatggtctg tacagcggtc atgcgcccac acccctgacc gcacgcggta ttgcgcaagc
     8761 gcaaaatctg catacactgc tagatgatgt ttcctttgac ctggttttat gcagtgaact
     8821 ggaacgggca cagcataccg cgcgactggt tctcagtgac cgccagctcc ccgttcatat
     8881 catccctgaa ctcaacgaaa tgttttttgg cgactgggag atgcgacatc atcgcgacct
     8941 catgcaagaa gatgccgaaa actatagcgc gtggtgcaat gactggcagc atgctatccc
     9001 cacgaatggt gaaggatttc aggcattttc gcaacgtgtg gaacgcttta tcgcaaggct
     9061 tagtgaatat cagcactatc agaatatttt aatcgtcagc catcagggcg tactgagtct
     9121 gttaattgct cgtttaattg gcatgcctgc cgagtctatg tggcattttc gcgttgacca
     9181 ggggtgttgg agcgccattg atatcaacca aaaattcgcg acgctacgcg tcctcaatag
     9241 ccgtgccatc ggggtcgaga atgcatgact tttctgtttt tttacgggta agccgcaacg
     9301 accattgaca gccccgggca ggctgatatt ctccgcagcc agactttttc cgtcagacac
     9361 gactttgtag aaattgtttt acaaaaatgg cgatgcaatc tgcggcgcgg ggtgggatga
     9421 tagcccactt tcgaaagccg attcggcgac aattgtcccg aaatcgcctc tggttcaggt
     9481 atactgacag accattttta tctatttgat tcacccaggg ggaaaacttg cagggtaaag
     9541 cactccagga ttttgttatc gacaaaattg atgacctcaa aggtcaggac atcatcgcct
     9601 tagacgttca gggcaaatcc agcatcaccg actgcatgat catctgtacg ggtacgtcca
     9661 gccgtcatgt tatgtccatt gctgaccacg ttgtgcagga gtctcgcgca gcgggcctgt
     9721 taccgctcgg cgtagaaggt gaaaacagcg ccgactggat tgtcgtggat ttgggcgatg
     9781 tgattgtcca tgtcatgcag gaagagagcc gtcgcctgta tgaactggaa aaactctgga
     9841 gttaatgcgt gaagctgcaa cttgtcgccg tgggaacgaa aatgccggac tgggtacaaa
     9901 ccggttttac cgagtacctg cgtcgttttc cgaaagatat gcccttcgag ctgattgaaa
     9961 ttccggccgg aaaacgcggc aagaatgcgg acatcaagcg catactcgac aaagagggtg
    10021 agcagatgtt ggcggccgca ggcaaaaacc gcattatcac cctcgatatt ccaggcaagc
    10081 cctgggatac gccgcagtta gccgctgagc tggaacgctg gaagctggat ggtcgcgacg
    10141 tcagtctact gattggcggg cctgaagggt tgtcgcctgc ctgtaaagcg gcggcggagc
    10201 agagctggtc gctgtcggcg cttaccctcc cccatccgct ggttcgcgtg ctggtcgcag
    10261 agagtctgta ccgggcgtgg agcatcacca ccaaccatcc ttatcaccgt gagtgataag
    10321 ggagctttga gtagaaaacg cagcggatga aactacagaa ctcttttcgc gactatacgg
    10381 cagagtccgc gctgtttgtg cgccgggcgc tggtcgcctt tttggggatt ttgctgctga
    10441 ccggcgtgct tatcgccaac ctgtataatc tgcaaattgt tcgctttacc gactaccaga
    10501 cccgctctaa tgaaaaccgc attaagctgg tgcctatcgc gcccagccgc ggcattatct
    10561 acgaccgtaa cggtatccct ctggccctca accgcactat ctaccagata gagatgatgc
    10621 cggagaaagt cgataacgtg cagcaaacgc tggacgcttt gcgcagcgtg gtagatctga
    10681 ccgatgacga tattgctgca ttccgaaaag agcgcgcacg ttcacaccgt ttcacctcta
    10741 ttccggtgaa aactaacctg accgaagtac aagtagctcg ctttgccgtc aatcagtacc
    10801 gttttccggg tgttgaagtt aaaggctata aacgtcgtta ctatccttac ggttcggcgt
    10861 tgacccacgt catcggctat gtgtcgaaaa tcaacgataa agacgtcgaa cgcctgaata
    10921 atgacggcaa actggccaac tatgcggcaa cgcatgatat cggtaagctg ggcattgagc
    10981 gttactatga agatgtgctg cacggtcaga ccggttatga agaggttgaa gttaacaacc
    11041 gtgggcgtgt tattcgccag ttaaaagaag taccaccgca agccggacac gatatttacc
    11101 tgacgctgga tctcaaactc cagcaatata ttgaaacgct gctggcgggt agccgcgcag
    11161 ctgtggtagt caccgatccg cgtacaggtg gggtgctggc gctggtttcc acgcctagtt
    11221 atgacccaaa cttgtttgtt gacggtatct ccagcaaaga ttattccgcc ttgttgaacg
    11281 acccgaatac accgctggtg aaccgcgcca cacagggggt ttatcctccc gcgtctacag
    11341 ttaaacccta tgtggcggtt tcggcattga gcgccggggt gatcacgcgc aatacgacgc
    11401 tgtttgaccc aggctggtgg caactgccag ggtcggaaaa acgttatcgt gactggaaaa
    11461 aatggggcca cgggcgtctg aatgtcacaa gatcgctgga agaatctgcg gataccttct
    11521 tctatcaggt ggcctacgat atggggatcg atcgcctctc tgaatggatg ggtaaattcg
    11581 gttatggtca ttacaccggt atcgacctgg cggaagaacg ttccggcaac atgcctaccc
    11641 gcgaatggaa acagaaacgc tttaaaaaac cgtggtatca gggtgacacc attccggttg
    11701 gtatcggtca gggttactgg acagcgaccc caatccagat gagtaaggca ctgatgatcc
    11761 tgattaatga cggtatcgtg aaggttccgc atttgctgat gagcaccgcc gaagacggca
    11821 aacaggtgcc atgggtacaa ccgcatgaac cgcccgtcgg cgatattcat tccggttact
    11881 gggagctggc aaaagacggt atgtacggtg ttgctaaccg ccctaatggt acggcgcata
    11941 aatactttgc cagcgcaccg tacaaaattg cggcgaaatc tggtaccgct caggtcttcg
    12001 gtctgaaagc gaacgaaacc tataatgcgc acaaaattgc cgagcgttta cgtgaccaca
    12061 aactgatgac cgcctttgcg ccatacaaca atccgcaagt ggctgtcgcc atgattctgg
    12121 agaacggcgg cgcgggtccg gcggttggta cgctgatgcg ccagatcctc gaccacatta
    12181 tgctgggtga taacaacacc gatctgcctg cggaaaatcc agcggttgcc gcagcggagg
    12241 accattaatc atgacggata atccgaataa aaaaacattc tgggataaag tccatctcga
    12301 tcccacaatg ctgctgattt tactggcatt gctggtttac agcgccctgg ttatctggag
    12361 cgccagcggt caggatattg gcatgatgga gcgtaaaatc ggccaaatcg cgatgggtct
    12421 ggtcatcatg gtggtgatgg cgcaaattcc tccacgcgtt tatgaaggct gggcccccta
    12481 tctctatatc atctgtatta ttttgctggt ggcggtagat gctttcggtg ccatctctaa
    12541 aggcgctcaa cgctggctgg acctcggtat tgttcgtttt cagccgtcgg aaattgccaa
    12601 aatagccgta ccactgatgg ttgcgcgctt tatcaaccgc gacgtttgcc cgccatcgtt
    12661 gaagaacact ggcatcgcgc tggtgctgat atttatgccc acgctgctgg tggctgcaca
    12721 gcctgacctg ggaacatcaa tcctcgttgc gctttccggt ctgtttgtac tgttcctctc
    12781 tggccttagc tggcgtctga ttggcgtcgc agtagtgctg gtagcggcgt tcattccgat
    12841 tctgtggttc ttcctgatgc atgattacca gcgccagcgc gtaatgatgc tcctggaccc
    12901 ggaatcagac ccactcggcg cgggctatca tattattcag tctaaaattg ctattggctc
    12961 cggcggatta cgcggcaaag gctggctgca cggcactcag tcacagcttg aatttctccc
    13021 cgaacgccat accgacttta tcttcgcggt actggcggaa gagctgggat tagtgggcat
    13081 tctgattctg ctcgctctct acattctgct gatcatgcgc gggctgtgga tagccgccag
    13141 agcgcaaacc acctttggtc gcgtcatggc tggcggctta atgctgatat tattcgttta
    13201 tgtcttcgta aatattggta tggtaagcgg tattctgccg gttgtagggg ttccgctccc
    13261 actggtcagt tatggaggat cggcgctaat tgtgctgatg gctgggttcg ggattgtaat
    13321 gtcaatccac acccacagga aaatgttgtc gaaaagcgtg taagaggtgc gcaatgcgta
    13381 agcagtggct cgggatctgc atcgcggcag gaatgctcgc ggcatgtaca agcgatgatg
    13441 gtcagcaaca gacggtaagt gtaccgcagc ctgcggtatg taacggcccc atagttgaaa
    13501 ttagcggggc ggacccgcgt ttcgaaccac tgaacgcgac ggcaaatcag gattaccagc
    13561 gcgacggtaa aagctacaaa atcgtgcagg atccgtctcg atttagccag gcgggactgg
    13621 cggcaatcta tgacgccgaa cctggcagta acctgacggc ctctggcgaa gctttcgatc
    13681 cgacacagtt gacggcggcc catccaacgc ttccgatccc cagctacgcc agaatcacta
    13741 acctggctaa cgggcgaatg atcgtggtgc gcattaatga tcgcggcccc tacggcaacg
    13801 accgcgtaat ttcgctttct cgcgcagcag ctgaccgtct taacacgtca aacaacacca
    13861 aagttcgtat cgatccgatt attgtcgccc aggatggttc gctttctggt cctggtatgg
    13921 cttgtaccac tgtcgccaaa cagacttacg ccctgcctgc acctcccgat ttaagcggtg
    13981 gcgcggggac aaattcagtg tctggcccgc agggtgacat tcttccggtc agtaactcga
    14041 cgctaaaaag cgaagatccg accggcgcgc cggtaaccag cagcggtttc ctcggcgcac
    14101 caacgacctt agcgcctggt gtactggaag gcagcgaacc gacacctgca ccacagcccg
    14161 ttgttacagc tccgtcgaca acgcctgcaa cctcgcctgc aatggtgaca ccgcaagccg
    14221 cctcgcaaag cgccagcggc aactttatgg tgcaagtcgg ggccgttagc gatcaggctc
    14281 gtgcgcaaca gtaccaacag caactgggac agaagttcgg cgtccccggt cgcgtaactc
    14341 aaaatggcgc ggtctggcgg atccagcttg gcccattcgc cagcaaagcc gaagccagta
    14401 ccttgcagca acgtttgcaa accgaagccc aattacagtc atttattacc accgcgcagt
    14461 agcgtaaagc aggcatctga tgtgtcaatt tctgtaaatg acgttaacaa agtcacgcgg
    14521 aaagtcagat gcctgccggt agtgcatttg ctatagtagg gcactttttt taattccatc
    14581 acggatgtcg tagttcagac catgaatacc attttttccg ctcgtatcat gaagcgcctg
    14641 gcgctcacca cggctctttg cacagccttt atctctgctg cacatgccga tgacctgaat
    14701 atcaaaacta tgatcccggg tgtaccgcag atcgatgcgg agtcctacat cctgattgac
    14761 tataactccg gcaaagtgct cgccgaacag aacgcagatg tccgccgcga tcctgccagc
    14821 ctgaccaaaa tgatgaccag ttacgttatc ggccaggcaa tgaaagccgg taaatttaaa
    14881 gaaactgatt tagtcactat cggcaacgac gcatgggcca ccggtaaccc ggtgtttaaa
    14941 ggttcttcgc tgatgttcct caaaccgggc atgcaggttc cggtttctca gctgatccgc
    15001 ggtattaacc tgcaatcggg taacgatgct tgtgtcgcca tggccgattt tgccgctggt
    15061 agccaggacg cttttgttgg cttgatgaac agctacgtta acgccctggg cctgaaaaat
    15121 acccacttcc agacggtaca tggtctggat gctgatggtc agtacagctc cgcgcgcgat
    15181 atggcgctga tcggccaggc gttgatccgt gacgtaccga atgaatactc gatctataaa
    15241 gaaaaagaat ttacgtttaa cggtattcgc cagctgaacc gtaacggcct gttatgggat
    15301 aacagcctga atgtcgacgg catcaaaacc ggacacactg acaaagcagg ttacaacctt
    15361 gttgcttctg cgactgaagg ccagatgcgc ttgatttctg cggtgatggg cggacgtact
    15421 tttaaaggcc gtgaagccga aagtaaaaaa ctgctaacct ggggcttccg tttcttcgaa
    15481 accgttaacc cactaaaagt aggtaaagag ttcgcctctg aaccggtttg gtttggtgat
    15541 tctgatcgcg cttcgttagg ggttgataaa gacgtgtacc tgaccattcc gcgtggtcgc
    15601 atgaaagatc tgaaagccag ctatgtgctg aacagcagtg aattgcatgc gccgctgcaa
    15661 aagaatcagg tcgtcggtac tatcaacttc cagcttgatg gcaaaacgat cgagcaacgc
    15721 ccgctggttg tgttgcaaga aatcccggaa ggtaacttct tcggcaaaat cattgattac
    15781 attaaattaa tgttccatca ctggtttggt taaaaattga acacttgaaa gtgtaatttc
    15841 cgtccccata tactaagcat cagtaaaaaa ctcccgcctt ctggcgggag ttgctattta
    15901 attacgttac gccggagctg acatgaaaac caaacttaac gaactgcttg aattccctac
    15961 tccttttact tacaaagtta tggggcaggc gttacctgag ctggttgatc aggtggttga
    16021 agtggtacag cgccatgcgc caggtgacta caccccaacg gtaaaaccaa gcagcaaagg
    16081 caactaccac tcggtatcta tcactatcaa cgccactcat atcgagcagg ttgaaacact
    16141 gtatgaagaa ctgggcaaaa tcgatattgt ccgcatggtt ctgtaactcg cttctccgtt
    16201 acccggcccc tggtcgggta actcccctct cctcgctgtg atatactttt cccccacttt
    16261 tactcattct ccacggagat gccgttttgt atcaggataa aattcttgtc cgccagctcg
    16321 gtcttcagcc ttacgagcca atctcccaag ctatgcatga attcaccgat acccgcgatg
    16381 atagtaccct tgatgaaatc tggctggtcg agcactatcc ggtattcacc caagggcagg
    16441 caggaaaagc ggagcacatt ttaatgccgg gtgatattcc ggtgattcag agcgatcgcg
    16501 gtgggcaggt gacttatcac gggccggggc aacaggtgat gtatgtgttg cttaacctga
    16561 aacgccgtaa actcggtgtg cgtgaactgg tgaccttgct tgagcaaaca gtggtgaata
    16621 ccctagctga actgggtata gaagcgcatc ctcgggctga cgcgccaggt gtctatgtcg
    16681 gggaaaagaa aatttgctca ctgggtttac gaattcgacg cggttgttca ttccacggtc
    16741 tggcattaaa cgtcaatatg gatctttcac catttttacg tattaatcct tgtgggtatg
    16801 ccggaatgga aatggctaaa atatcacaat ggaaacccga agcgacgact aataatattg
    16861 aaccacgttt actggaaaat attttagcgc tactaaacaa tcctgacttc gaatatatta
    16921 ccgcttaatt tcatacctca atggcccaat ttacactggg tcattactca taatacctgc
    16981 taatgcttta catctcgttc gcgtttgtat attttcttta tcacttgcag aaatgcggtg
    17041 ctacgccttg ctccgcaact caccccattg attaacctat tgaaatagtt gattatggtg
    17101 agcaaaagcg ttccgttcca attagacata agattattgt aattttttta aatattattt
    17161 ttccatgaat aaaattggag taagtgcgtg gatagtaata atcaaattga accctgttta
    17221 agcagaaagt cgtcagaagg taaaccacaa atatttacaa ccttacgaaa tattgatctt
    17281 aaccttctga ctatttttga agctgtatat gtacataaag ggatcgttaa tgcagcgaaa
    17341 gtgcttaatc tgcccccctc agcaatcagt cagtctattc agaaactgcg cgttatattc
    17401 cctgacccat tgtttattcg caaaggccag ggtgtcactc ctaccgcatt tgcgatgcat
    17461 ctacatgagt atatcagtca gggccttgag tccattcttg gcgcactgga tatcgaagga
    17521 agctatgata agcaacgaac gataactatt gcgaccactc cctcggtcgg agccctggtc
    17581 cttcctgtca tctatcgggc gattaaaact cactatccgc agcttttact gcgcaacccg
    17641 cccatcagcg acgcggaaaa ccaactcagt cagtttcaaa ccgatctcat catcgataac
    17701 atgttttgca ccaatcgtac ggtgcaacat catgttctgt tcaccgacaa tatggtgtta
    17761 atttgccgcg agggaaatcc actactctct ttagaagatg acagagagac tatcgacaac
    17821 gctgcgcatg tactcctgtt accggaaggg caaaatttca gcggtctgcg gcagagagtt
    17881 caagagatgt ttccggaccg gcaaatcaat ttcaccagct acaacatttt gacaatcgct
    17941 gcactggttg ccaacagtga catgttagcg attattccca gccgttttta taacctgttt
    18001 agtcgttgct ggccgctgga aaaactgcct tttccgtcct taaatgagga gcaaattgat
    18061 ttctctatcc actacaacaa attcagcctg cgtgatccca ccctgcacgg agtaatagat
    18121 gttatccgta atgcattttg aaaaagtatt gttacagcca gatcacagcg cagaacgata
    18181 aaatggcaca atccaacaac aattttacat tttcgcgacc gctttggctg ctttcaggtc
    18241 cgtttcaatg atatactgcc agtcgttaat tcaaaaatag ttgataatta caacaatcta
    18301 ttgaattgaa acgctttcct tcgtaattcg caactggaac acgcacgcta tgagtaaacc
    18361 cattgtgatg gaacgcggtg ttaaataccg cgatgccgat aagatggccc ttatcccggt
    18421 taaaaacgtg gcaacagagc gcgaagccct gctgcgcaag ccggaatgga tgaaaatcaa
    18481 gcttccagcg gactctacac gtatccaggg catcaaagcc gcaatgcgca aaaatggcct
    18541 gcattctgtc tgcgaggaag cctcctgccc taacctggcg gaatgcttca accacggcac
    18601 agcaacgttt atgatcctcg gcgctatttg tacccgccgt tgtccgttct gtgatgttgc
    18661 ccacggtcgc ccggtagctc ctgatgccaa tgaaccagtg aaactggcgc agaccattgc
    18721 cgatatggcg ctgcgttatg tggttatcac ctccgttgac cgtgatgacc tgcgcgatgg
    18781 cggtgcccag cactttgcgg attgcattac tgccattcgg gaaaaaagcc cgcaaatcaa
    18841 aattgaaact ctggtgccgg atttccgtgg tcgtatggat cgtgctctgg atattctgac
    18901 tgcaacgcca ccagatgtgt tcaaccataa cctggaaaac gtaccgcgta tttaccgtca
    18961 ggtacggcct ggtgcagatt acaactggtc gctgaagctg ctggaacgct ttaaagaagc
    19021 gcatccggaa atcccgacca agtctggtct gatggtgggt ctgggtgaaa ccaatgaaga
    19081 aattattgag gtaatgcgcg acctgcgcca tcatggtgtg acgatgttaa cgctggggca
    19141 atatttgcag ccaagccgcc atcacctgcc ggttcaacgt tacgttagcc cggatgagtt
    19201 cgacgaaatg aaagccgaag cgctggcgat gggctttacc catgctgcat gcggtccgtt
    19261 tgtccgctct tcttaccacg ccgatttgca ggcgaaaggg atggaagtta agtaatcctg
    19321 taataattac ttacatctgt ctgataaaaa acccgctttt tgaagcgggt tttttgtatc
    19381 gaacaagata ttgagggagc gtcctgctcg ccacgttact ctttatgaga gagcttttca
    19441 gcctgaagat caacgtctgc gccttttttc gccgcagcat cgtcatcatt catcgccttc
    19501 ttgaaccctt taatggccgc tccaaggtct ccgcccagcg tacgtaactt cttagtccca
    19561 aacagcagaa cgaccagcgc cgcaactacc agcagtttgg taatactaat ctcacccata
    19621 gataccttct tgacatataa ccggcaacag aacgcgcctt aaaaaccaga gaatattaac
    19681 ggtcattcga cgcgcgcaca caatagcaat ctgtaacaag gtgaatcaag cgccgagtaa
    19741 aaaaacatca taataattgc ggcggcgcaa agcgacggtt gtttaagacg ggcagttgcg
    19801 cgcgcacctg acgcacacgt tcgggcgtca cttccgccat aatgagtgca ggcatttctg
    19861 acgctgccgc aatggtgacg ccaaagggat ctataatccg gctttgcccg atatttttgt
    19921 tcccgcactc ccccgccgcc accatataac aggtggtatc cagcgcacga gcggcaagca
    19981 acgttgacca gtgatgctct ttgagcggcc cacgaaccca ggcagcagga agtaccagga
    20041 tttcagctcc ctgtaatgcc tgtgccagct ctggaaagcg taagtcataa caggtcatca
    20101 gaccgacctt catcccttcc acctccagta acggagcgat ttcattacca gcatcaacac
    20161 ggcgtgattc ctgaatggca aatgcatcat agagatgcag tttggcataa cgggcgacga
    20221 tgtttcctgc ctgaagtgcc accagcatat tccatgcgcg ccccggcgtt gaaggaacat
    20281 gaatcgtcag aattgtcgtc atcatgttac gtttactttc tcgccgtaaa cgtccgagga
    20341 attcaccttc cagcagctgt gctgatttaa ccgatagatc tgcatcatga tcatcgcacg
    20401 ccagcaatgc ttccggcagg acaaacagcg atacgtcgtt ttccgccgcc tgcgccatca
    20461 acgaggcaca aatctcagcg ttcttttccc acacagatgt aacagcaaac tgtcctgcag
    20521 caaccagcat tgccacctcc tgtcagagtc gtaaaattcg ccaacgacga ttattcggcg
    20581 ttacacttat cactcataca aatcaaatag caggattttg cagtgttaca acttctttta
    20641 gcagttttta ttggcggtgg tacgggaagc gtggcgagat ggctgttaag tatgcgattt
    20701 aacccgctgc atcaggcgat tccgttgggg acgctggcag caaacctgat tggggcattc
    20761 atcataggaa tgggattcgc ctggttcagc aggatgacga acattgatcc agtgtggaaa
    20821 gtattaatca ccaccggatt ttgtggcggt ctaacaacct tctcaacatt ttcggcagaa
    20881 gtggtgtttt tgttacaaga gggccgcttt ggctgggcat tactgaacgt tttcgtcaac
    20941 cttctggggt cttttgccat gaccgcactg gctttctggc tgttttccgc ctcaaccgca
    21001 cactaacgac caaaaaaaac ccgctgatta agcgggtttt gaattcttgc tgacgtatct
    21061 tacagagcga ttacgtttgc agcagaaggg cctttggcac cgttagtgat ttcgaactct
    21121 acgcgctgac cttcagcaag agttttaaaa ccattagtct ggattgcaga gaagtgtacg
    21181 aacacgtctt tgctgccgtc ttccggagta atgaaaccga atcctttgga ctcattaaac
    21241 cacttaacgt tacctttaat cttagacatc aaaattacct ttacatgaaa aatagacaca
    21301 aatgctgtgt cggttaccag tacaccaatt gtggtacgct ttgtccagtg caactttact
    21361 aaaaagtgat aaaagtcgcg ttatttttga tgttacttat tttagttatt gattttaaag
    21421 aagttactaa aacttcattt gtctcaaaac tgaaagcgca tccaggcaaa gtacacattg
    21481 ccattgttgt aggtacccgg aatgtaggtc atctgaaaag taactgggcc ataacccacg
    21541 gaggccaatg gcagtagaac cgggagaggg atgtaattcc agttatcgcg tgccgttacg
    21601 ccagcggtga atcccagacc taaatgaaaa ttttcatccg ccagcggtcg ccaggtactt
    21661 tcccatccgt atccggcaat cggttcccat ttgttccacg agtccttaaa tgccatggca
    21721 tacaggccat gccagtttcc tttttcatcc catcgcgact gaccaaaacc gccaccccac
    21781 gctcgctcgt tatagcgatc ggttttttct ttgtcgtaag cgaaacgtgc atgccaggtg
    21841 atggcaggaa tatataaatc ataatgttca ggctgttgcc aggtttgtgc aatattttct
    21901 ctaaacgttg tcatccactc atctgcgtta gcaaaaactt taccaacgct gattaactga
    21961 ataaaaacaa aggaaaagat agcgacatat ttactcacgt tcatttgtga ccataaaaca
    22021 tttatcaaaa atct
//
LOCUS       DAJVTL010000066        21612 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.066, whole genome shotgun sequence.
ACCESSION   DAJVTL010000066 DAJVTL010000000
VERSION     DAJVTL010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21612
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.066"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            3..1130
                     /locus_tag="OQQ26_002433"
     CDS             3..1130
                     /locus_tag="OQQ26_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016809609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HCS1857862.1"
                     /translation="MRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDL
                     HPGRGYPIGAAFFSVGRFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSDLDDV
                     AEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAEQFALAGLDAQHLQ
                     LLVHSGSRGLGQSILQRHIASFSHHGLPEGSDDALRYIAEHDDALAFARINRQLIALR
                     IMQKVKATGSPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLV
                     QPVANEKTLHSLAHGAGRKWGRTECKGRLAVKYTATQLSRTELGSRVICRDKQLIFEE
                     APQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG"
     gene            1127..1741
                     /locus_tag="OQQ26_002434"
     CDS             1127..1741
                     /locus_tag="OQQ26_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HCS1857863.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QGQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1798..3255)
                     /gene="pepD"
                     /locus_tag="OQQ26_002435"
     CDS             complement(1798..3255)
                     /gene="pepD"
                     /locus_tag="OQQ26_002435"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HCS1857864.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3516..3974
                     /gene="gpt"
                     /locus_tag="OQQ26_002436"
     CDS             3516..3974
                     /gene="gpt"
                     /locus_tag="OQQ26_002436"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HCS1857865.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            4066..5310
                     /gene="frsA"
                     /locus_tag="OQQ26_002437"
     CDS             4066..5310
                     /gene="frsA"
                     /locus_tag="OQQ26_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HCS1857866.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEKA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITDWIEKRLC"
     gene            5368..5769
                     /gene="crl"
                     /locus_tag="OQQ26_002438"
     CDS             5368..5769
                     /gene="crl"
                     /locus_tag="OQQ26_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HCS1857867.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5808..6863)
                     /gene="phoE"
                     /locus_tag="OQQ26_002439"
     CDS             complement(5808..6863)
                     /gene="phoE"
                     /locus_tag="OQQ26_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HCS1857868.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGDTQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRDTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAVGMTYQF"
     gene            7151..8254
                     /gene="proB"
                     /locus_tag="OQQ26_002440"
     CDS             7151..8254
                     /gene="proB"
                     /locus_tag="OQQ26_002440"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HCS1857869.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            8266..9519
                     /gene="proA"
                     /locus_tag="OQQ26_002441"
     CDS             8266..9519
                     /gene="proA"
                     /locus_tag="OQQ26_002441"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HCS1857870.1"
                     /translation="MLEQMGIAAKQASYKLVQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLGEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESAEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9634..9709
                     /locus_tag="OQQ26_002442"
     tRNA            9634..9709
                     /locus_tag="OQQ26_002442"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9667..9669,aa:Thr,seq:cgt)
     gene            9875..11089
                     /locus_tag="OQQ26_002443"
     CDS             9875..11089
                     /locus_tag="OQQ26_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1857871.1"
                     /translation="MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRV
                     AGKEKLLALGVYPEVTLADARAKREDAKRGIAGGIDPMEAKREEKIARETQLNNTFKD
                     IALEWHSSKLKKWSAGYASDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGA
                     TEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKA
                     LSSYSRSALVVMAARLLIITGLRTGELRGALWDEIDFNKAIWEIPASRMKMRRPHIVP
                     LSDQALSLIGKIREITGNYPLMFPGRNDPRKTMSEASINQVFKRIGYAGRVTGHGFRH
                     TMSTILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQWYADYMDALEKE
                     ENVVHGSFGKRA"
     gene            11232..12113
                     /locus_tag="OQQ26_002444"
     CDS             11232..12113
                     /locus_tag="OQQ26_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857872.1"
                     /translation="MVRAKKQDLAWFDISNYEFLNDLTLPDLIQELEWRDFLLRHAKD
                     DTAIFKEEYDIKYERIFSGDPNLTILNEEEEEVEEFIRKVNDEAPSLRNEYDDLPSLS
                     SAMGVSPVTFSELAMYSFSSIDQGFFKRDEEDCYLKANAMLASVTGNLSNCSPNIILV
                     SIDLDDATDDEIITSLTHLLPLWRKELKVPEREHVAQKRIGLKTLQKLISNRVIPIVD
                     LLIWGEKSGKEVSNPMISALVFSDDPKDTQAIKESIKPFALESISERYTRLLQLYVNK
                     DREMSLIKISDLMSRDL"
     gene            12311..12508
                     /locus_tag="OQQ26_002445"
     CDS             12311..12508
                     /locus_tag="OQQ26_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015462155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HCS1857873.1"
                     /translation="MSQSFIRLSEVQRRTGYSKAWIYRLIKEQRFPQSVKIGSRSIAF
                     IESEIEEWINQRIAESRGEVA"
     gene            12508..12939
                     /locus_tag="OQQ26_002446"
     CDS             12508..12939
                     /locus_tag="OQQ26_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001437021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857874.1"
                     /translation="MNKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYML
                     RTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCR
                     GDVLKVITHINHLANINDHNGLSQQEIADILKLYPDAFNAA"
     gene            12952..13785
                     /locus_tag="OQQ26_002447"
     CDS             12952..13785
                     /locus_tag="OQQ26_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001019359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HCS1857875.1"
                     /translation="MNIEKSRLISEAAPHLNASLSTINGNEFAAIVPVIPGHIGGRET
                     NIVSAKALHKALGVGKDFSTWITDRISEYDFTIGHDYSVHKTISPNLGKSPNGAAYRK
                     IKQSGRPGKDYLLSVGMAKELAMIERNDQGRAIRRYFIQCEEELQRSVPEIAARYRRQ
                     LKARISAANNFKPMCDALNMARAEQGKTTQQHHYTNESNMISRIVLGGLTAKQWARIN
                     GYSGEPRDHMNAEQLEHLSYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEVVH
                     V"
     gene            13778..13960
                     /locus_tag="OQQ26_002448"
     CDS             13778..13960
                     /locus_tag="OQQ26_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000476150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1857876.1"
                     /translation="MFKPTGTPQPQKRYKDAHGALVTVESVSHNRVTFYRDGYQSPCV
                     QPLARFMKEFAEVNKC"
     gene            13954..15021
                     /locus_tag="OQQ26_002449"
     CDS             13954..15021
                     /locus_tag="OQQ26_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HCS1857877.1"
                     /translation="MLTVQKKIFSLAGMSPKSSNMTAKSGINTADTSKVYHFLVVGAN
                     ALTMSEITVDGVSVEKVGGCAREFLVVDGFLCSRSDSTKTFVHTRDVNEMSAMYCASG
                     ASNSEFSESIKKSLPLCGNTVYGYKAPHKTGAGFRSPEMYEATHDAPSVFFCAVSQTH
                     TFFSDAVIIRVACKIMVGWTGQPKGWPVSLYAGTANSVQSTTSEFRSSGGGKNSQYKE
                     AATCWLLPLPKNRNLSGLSPQFAAIARQLPPKFIILLPSLNAMLAVLWCAITSAFLLV
                     VSAWRWHMIKTYDVHMDPLERTSQIITLTEVINDILVSNSPSRDERLKALLAILDLAV
                     RDVHFLLEGGEMPGKTGATNE"
     gene            15014..15208
                     /locus_tag="OQQ26_002450"
     CDS             15014..15208
                     /locus_tag="OQQ26_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001065662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857878.1"
                     /translation="MNNSINTPRLTSALQLIEQAAAVLVAVSLSAEEMDATDVVDAIK
                     ACSSLVNDARAELVILGGEK"
     gene            15205..15468
                     /locus_tag="OQQ26_002451"
     CDS             15205..15468
                     /locus_tag="OQQ26_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001468267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinic acetylcholine receptor subunit beta"
                     /protein_id="HCS1857879.1"
                     /translation="MNINLIYRHPCELEIESLLGREEPYPDTFTPADCATERLTRART
                     GLVHVMNEIVPSVGGEQATVINSWLQKVTSLIDISLIDVESAK"
     gene            15465..15686
                     /locus_tag="OQQ26_002452"
     CDS             15465..15686
                     /locus_tag="OQQ26_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857880.1"
                     /translation="MTNIQLIEAQCRIEQVQTVLGFWLEGASPSNRDKLMIGAVMSLL
                     NGVPEAIQEADELLGKYELQNHSGEAKHE"
     gene            15679..16281
                     /locus_tag="OQQ26_002453"
     CDS             15679..16281
                     /locus_tag="OQQ26_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016243485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857881.1"
                     /translation="MNNFLTFHTEATPDGVNIMYRSNDGMTERVEAVSYIDAVNRLDA
                     GDYDDKPDEGMSIHLAIADGGNQGYFDYTSQHNVIMWRWLIATVFMLEMREENGTVSI
                     IDDTGNPSEVAVYSNGIVAMPLYPVAERLAMANNIEGAMIERFGIESGTERAIIFYRA
                     MMDVEQGALTPFGRETLAELHNSFIAELNENGMPAEPVTH"
     gene            16292..16633
                     /locus_tag="OQQ26_002454"
     CDS             16292..16633
                     /locus_tag="OQQ26_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000628964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857882.1"
                     /translation="MITKNFRLNALANKYASALYNHITSTSGGDYFMVDADGEAVRVE
                     IVNGVKGVRSLIDSYTLAAMKVFYPQWETVGIELLERCVTKDGLTDVGREIWQSMVND
                     MGATVAGGSHA"
     gene            16626..16997
                     /locus_tag="OQQ26_002455"
     CDS             16626..16997
                     /locus_tag="OQQ26_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001580247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857883.1"
                     /translation="MRENAEMALSSAIGEQVAKIAGAVWIHNLHSTGEEKMAIQTPEG
                     RTITTSLKPSDVCDLICAFMYPAMRTVHGDKWKLATTAEFDMWLNNDGMLTDYGITKW
                     QMLVSHIANAIDHVGYGDAKH"
     gene            16984..19740
                     /locus_tag="OQQ26_002456"
     CDS             16984..19740
                     /locus_tag="OQQ26_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020231445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF927 domain-containing protein"
                     /protein_id="HCS1857884.1"
                     /translation="MRNIDLIRQVISASENNWPHVLGCLNINVPDSPRRHAPCPACGG
                     KDRFRFDDNGRGSFICNQCGAGDGLDLIKRVNNCDTTEAALLAADVLGIDYRTTETPE
                     ATSQKREQLETERQRREQERLKRAEKDEQQRRDTFSRQFDDMRRKAVNGKSDYLVAKG
                     VGDFTFPVLPDGSLLLALVDKSGAVTAAQTITSHGEKRLLTGSAKRGAYHAINAPETT
                     QSILIAEGLATALSAHLIRPEALTVAAIDAGNLLYVAQVLRDKFPSAQIIIAADNDHS
                     EGRQNTGRIAAEKAALSVSGWVALPPTDHKADWNDYHQKHGIKCATEAFNKSMYQPQG
                     NGVKQEPQTIEGSDFKVMDTDPLKPRIESREDGIYWVSPRADSQSGEIINNESWLCSP
                     LSVIGTGRDDKDQYLILRWLSFGSETPTTAAIPLADIGEREGWRTLKAGGVNVTTKSS
                     LRAILADWLQRSGSRELWRVAHATVWQCGAYIMPDGEIIGTPENPVLFSGRSSAAAGY
                     TVSGSAKSWRDNVARLAFGNYSMMTGIGAALAAPLIGLVGADGFGIHFYEQSSAGKTT
                     TANVASSLYGNPDLLRLTWYGTALGLANEAAAHNDGLMPLDEVGQGADPVSVSQSAYA
                     LFNGVGKLQGAKDGGNRDLKRWRTVAISTGEMDLETFIATSGRKTKAGQLVRLLNIPL
                     SKAVRFHDYQNGKQHADALKDAYQHHHGAAGREWIKWLADHQQQAIKTVRDCESRWRN
                     LIPSDYGEQVHRVAARFAILEAALLLGEVVTGWDAQTCRDAIQHSYNAWLREFGTGNK
                     EHQQIIEQTEAFLNAYGLSRFAPFPYSPADLPIKDLAGYRQRGEHDESPMIFYTFPAT
                     FEKEIACGFNAKQFAEVLKKAGMLTPPNSGRGYQRKSPRIQGRQINVYVLNYQPGDYN
                     SSEE"
     gene            20348..20509
                     /locus_tag="OQQ26_002457"
     CDS             20348..20509
                     /locus_tag="OQQ26_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857885.1"
                     /translation="MAISVKPVLISEKQMEAIKKIQEEQRKKSGIGVAPTLHEIARGL
                     IDKALAGCM"
     gene            20526..20987
                     /locus_tag="OQQ26_002458"
     CDS             20526..20987
                     /locus_tag="OQQ26_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2824 family protein"
                     /protein_id="HCS1857886.1"
                     /translation="MELKFIDNPVRLQAFLNEPGNTENIVEPGHSYYIKPDAVYLGIY
                     EGLVLAGVHEVRNFWHSVVECHAVYDPGFRGEYALQGHRLFCKWLLENSPFLNSITMV
                     PDTTKYGRAIIRLLGATRVGHLDDAYIRCGKPVGVTLYQLTRQQYKEFSEC"
     gene            20981..>21612
                     /locus_tag="OQQ26_002459"
     CDS             20981..>21612
                     /locus_tag="OQQ26_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001590889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA transfer protein"
                     /protein_id="HCS1857887.1"
                     /translation="MLITHIAHKHLNRAVYEKGGDGGASKAQAKAQQQAIDLQREQWN
                     TVMNNLKPYAEVGLPALQQLQGLMTLEGQNKAANDFFGSGLYKTQADQARYQNLVSAE
                     ATGGLGSTATSNQLSSIAPMLYNNWLSGQMQNYGNLLNVGMNAASGQATAGQNYANNT
                     GQLLQGLGAIRAGQAQQPSSLARGIGGAASGALAGAQLGSVVPGIGNVAGA"
BASE COUNT         5704 a         5064 c         5599 g         5245 t
ORIGIN      
        1 atattcgtcc cttatccgat gcggtattta ccatcgcatc tgatgacctg tggatcgaga
       61 gtttagcgat ccaacaatta cacaccacgg caaatttacc caacatgcag cgcgtagtgg
      121 ggatgccaga tttacatccc ggacgcggct atccgattgg cgcagcgttc ttctctgttg
      181 gtcgttttta tccggcactg gtcggcaatg atatcggctg cggcatggcg ctatggcaaa
      241 cagatattct cgctcgcaaa tacaacgccg ataagtttga aaagcgatta tcagatctgg
      301 atgacgttgc tgaagaaagc tggctggagg aaaacctgcc gtcagcattt gcacagcatc
      361 cgtggcgcag ctcgcttggc tctatcggtg gcggcaatca tttcgctgaa ctgcaacaag
      421 ttgatcaaat catcaacgct gaacagtttg cactggcagg tctggatgca caacatctgc
      481 aactgttggt tcatagcggc tcgcgggggt tggggcagtc tattttacag cggcatattg
      541 cctcgttttc gcatcatggt ttgcctgaag gcagtgacga cgcgctacgg tatattgcgg
      601 aacatgacga tgcgctggcg tttgcgcgta ttaatcgcca gctgatcgct ttgcgcataa
      661 tgcaaaaagt taaggccacg ggaagtccgg ttctggatgt ggcgcataac tttgttagcg
      721 cgtgtcaaat cggcgatcaa cagggctggt tgcatcgtaa aggtgccacg ccggatgaca
      781 acggtctggt gattattccc ggttcacgcg gtgattactc ctggcttgta cagcctgttg
      841 cgaacgaaaa aacgctccac tcgctggcgc atggggcagg gcgtaaatgg gggcgcaccg
      901 agtgtaaagg gcgtctggca gtgaaataca cggcgacgca actctcgcgt actgaacttg
      961 gcagtcgggt aatttgtcgc gataaacaac tcatctttga agaagcgcca caagcctata
     1021 aatcggctga aagcgtggtg caatgtctgg tgcaggccgg tttaattatt cctgtcgcgc
     1081 ggctgcgtcc ggtgctaacg ctcaaaaaca gtggagggaa aaaaggatga tcttgctaca
     1141 actctcctca gcgcaggggc cggaagaatg ttgtctcgca gtgaaaaagg cgctggaccg
     1201 gctaattaaa gaagctgccc gacaagacgt cgcggtaacg gtgctggaaa cagaaacagg
     1261 ccgctactct gacacgctgc gttcggcgct gatttctctg gatggcgaca acgcatgggc
     1321 gttaagcgaa agctggtgtg gcactattca gtggatttgt ccgagcccgt atcgcccaca
     1381 tcacgggcgt aaaaactggt ttctgggcat tgggcgtttt accgctgatg agcaggggca
     1441 atccgatgcg atccggtatg agacgctgcg ttcgtcgggg ccgggcggtc aacatgtcaa
     1501 taaaaccgac tcggcggtac gtgccacgca tctggcatcc ggtattagcg tgaaggttca
     1561 gtcagagcgc agccagcatg ctaacaagcg gctggcgcga ttgctgattg cctggaagct
     1621 ggaacaacag caacaggaaa atagcgcggt gctgaaatcg cagcggcgaa tgttccatca
     1681 ccagattgaa cgtggcaacc cgcgacgaac gtttacaggg atggctttta tcgaaggata
     1741 atgaaggatg aaactgccgg aaggcgatta aacgccatcc ggcagcaaat caaataatta
     1801 cttcgccgga atttctttca gcagttcagt cagcagtgtc cagtaatgac ctacgctttc
     1861 gatgtgaact tgctcatccg gagagtgtgg accggtgatt gttggcccga tagaaaccat
     1921 gtccatttcc ggatacggtt ttttgaacag accacattcc aggcccgcgt ggataatctg
     1981 gatgttcggc gtcttgttga acaggcgctg ataggtttca cgtaccagat gcattaccgg
     2041 agaattagcg tccggctgcc agccaggata tgcgcctttc gcttcggttt tcgcgccagc
     2101 cagtttaccc agcgaatcca gcatgctcac cacgtagtct ttaccgctgt cgatcagtga
     2161 acggatcagg cagtgaattt ctacgttatt gtcagtcatg gtcaccacac cgacgttcag
     2221 ggaggtttcg accacacctt ttgccacgtc ggaattgcgg atcacaccgt tcggggtggc
     2281 gttcagcaga cgaataaagg tatcgcgaga tttcgcaatc agggctgctt tatcgttcgc
     2341 tacagagtcc agcaacaagg ccagattttt ctctttctct gccagctcgt ttttcaggat
     2401 ctcctgatag gtattcacca gagatttcag tgcgtcgact ttatcagctg cgacagcaat
     2461 ggtcgcaaag gcttcacgcg ggatggcgtt acgcagtgtg ccgccgttga aatcgataag
     2521 gcgcaggtcc agttcttctg catgacccgc caggaagcgc accagcagtt tgttggcatt
     2581 acccaggcca acgtggattt caccgccgga gtgaccgcct ttcagacctt ttaaggttaa
     2641 cttgaaggtt tcaaaaccag ctggaaccgc ttcacgatct aaatgcaggt tggaggtgaa
     2701 gtcgataccc cccgcacaac ccatgtagat ttcaccttct tcttcggagt cggtgttaat
     2761 cagaatatca gcctgcaacc agttgctctg taagccgaac gcaccgtcca taccggcttc
     2821 ttcggtcatg gtcagcagca cttccagcgg gccgtgaacc acgttttcgt cagccagaac
     2881 cgccagtgca gaggccatac caatgccgtt atccgcaccc agcgtggtgc cgcgcgcttt
     2941 aacccattcg ccatcaatat aaggctggat aggatctttc gtgaagtcat gcacggtgtc
     3001 gttatttttc tgcggcacca tatcgaggtg ggcctgtaag acgaccggtt tacgattttc
     3061 catacctgcg gtagcaggtt tacgaatcag gatattacct acctgatcgc gttcgacatg
     3121 gaaacctttc tcttttgccc aaccaacaat gtattcagcg agttgctctt catgatagga
     3181 cgggtgagga atagaacaga ttttggcaaa aatatcccac agcggctgtg gagataattg
     3241 agacagttca gacacgttaa gtctccttgt cgatcacccg caaaacagta ttgcaggtca
     3301 cagggttagc agaaaatgtt gtcaacacaa gacaggcttg cgagatatgt ttgagaatac
     3361 cactttatcc cgcgtcaggg agaggcagtg cgtaaaaaga cgcggactca tgtgaaatac
     3421 tggtttttag tgcgccagat ctctataatc tcgcgcaacc tattttcccc tcgaacactt
     3481 tttaagccgt agataaacag gctgggacac ttcacatgag cgaaaaatac atcgtcacct
     3541 gggacatgtt gcagatccat gcacgtaaac tcgcaagccg actgatgcct tctgaacaat
     3601 ggaaaggcat tattgccgta agccgtggcg gtctggtacc gggtgcgtta ctggcgcgtg
     3661 aactgggtat tcgtcatgtc gataccgttt gtatttccag ctacgatcac gacaaccagc
     3721 gcgagcttaa agtgctgaaa cgcgcagaag gcgatggcga aggcttcatc gttattgatg
     3781 acctggtgga taccggtggt actgctgttg cgattcgtga aatgtatcca aaagcgcact
     3841 ttgtcaccat cttcgcaaaa ccggctggtc gtccgctggt tgatgactat gttgttgata
     3901 tcccacaaga tacctggatc gaacagccgt gggatatggg cgtcgtattc gtcccgccaa
     3961 tctccggtcg ctaatctttt caacgcctgg cattgccggg cgttgttctt tttaacttca
     4021 ggcaggttac aatagtttcc agtaagtatt ctggaggctg catccatgac acaggcaaac
     4081 ctgagcgaaa ccttgttcaa accccgcttt aaacatcctg aaacctcgac gctagtccgc
     4141 cgctttaatc acggcgcaca accgcctgtg cagtcggctc ttgatggtaa aaccatccct
     4201 cactggtatc gcatgattaa ccgtctgatg tggatctggc gcggtattga cccacgtgaa
     4261 atcctcgacg tccaggcacg tattgtgatg agcgatgctg aacgtaccga cgatgattta
     4321 tacgataccg tgattggcta ccgtggtggc aactggattt atgagtgggc cacccaggcg
     4381 atggtgtggc aacaaaaagc ctgtgcggaa gaagatccgc aactcagtgg tcgacactgg
     4441 ctgcatgcgg ctacgttgta caacattgcc gcctatcctc atttgaaagg agatgacctg
     4501 gccgagcaag cgcaggcttt gtcaaaccgc gcctatgaaa aggccgctca gcgtctaccg
     4561 ggcacgatgc ggcagatgga gtttaccgta cccggcggtg cgcccatcac cggctttttg
     4621 catatgccga aaggcgatgg cccgttcccg acggtattaa tgtgtggtgg tctggatgcg
     4681 atgcagacgg actattacag cctgtatgaa cgttattttg cgccgcgcgg cattgcgatg
     4741 ctgactattg atatgccgtc ggtgggcttt tcttcaaaat ggaagctcac ccaggactcc
     4801 agcctgttgc atcagcacgt cttaaaggcg ctgcctaacg ttccgtgggt ggatcacact
     4861 cgcgtcgcgg cctttggttt ccgtttcggc gctaacgttg ccgtgcgtct ggcatacctt
     4921 gaatcgccgc gtctgaaagc ggttgcctgt cttggtccgg tagttcatac cctgttgagt
     4981 gattttaagt gccagcaaca ggtgccggaa atgtatcttg acgttctggc cagtcgtttg
     5041 gggatgcatg atgcttccga cgaagcgtta cgcgtggagt tgaatcgcta ttcattaaaa
     5101 gtgcaaggat tgctggggcg tcgctgccca acgccaatgt tatcaggcta ctggaagaac
     5161 gatccgttca gcccggaaga ggactcacgc ttaatcacct catcatctgc tgacggtaaa
     5221 ttattagaga tcccatttaa cccggtgtat cggaattttg acaaaggtct tcaggaaatc
     5281 acggactgga tcgaaaaacg tttgtgttaa aaatttgcta aattttgcca atttggtaaa
     5341 acagttgcat cacaacagga gattgcaatg acgttaccga gtggacaccc gaagagcaga
     5401 ttgatcaaaa aatttaccgc actaggcccg tatattcgtg aaggtaagtg cgaagataat
     5461 cgattctttt tcgattgtct ggctgtatgc gtcaacgtga aaccggcacc ggaagtgcgt
     5521 gaattctggg gctggtggat ggagcttgaa gcgcaggaat cccgttttac ctacagttac
     5581 cagtttggtc tgttcgataa agcaggcgac tggaagagtg ttccggtaaa agacactgaa
     5641 gtggttgaac gactggagca caccctgcgt gagtttcacg agaagctgcg tgaactgctg
     5701 acgacgctga atctgaagct ggaaccggcg gatgattttc gtgatgaacc ggtgaagtta
     5761 acggcgtgag tgaaatgtgc cggatgcatc acatccggca ataatcatta aaactgatag
     5821 gtcatgccaa ccgcgacaat atcatcatta ttaatattca atttgttatc gctatccagt
     5881 tggttgattt tataatcaac aaacgctgac atatttttgt tgaaataata tgtagccccg
     5941 acatcgatat aattgacaag atcttcatca ccgatgccct caatatcttt ccctttcgat
     6001 aagacataac ccagcgatgg acgcagacca aagtcaaact ggtattgagc gaccgcttca
     6061 aagttctgtg tcttattggc aaagccgcca gttattggcg tcattttgcg tgtttcagaa
     6121 taaaaagttg ccagataaat attattggca tcgtatttca gacctgtagc ccatgcttct
     6181 gcacgcttgc ctgtgtcacg gctttgcagg ttctgctcgt tggtgcgatc tgagttggta
     6241 taggccccac taatggcgaa atcgctgccg ccaaagtcat atgtcaatga cgtgccgaag
     6301 ccatcgccgt tttgcttttt aacgtcgcgg ttttcgtttt tcccttgata ttgcagggtt
     6361 aagttcaggc catcgataac gccgaagaag tcggtgttcc gatacgtcgc cagaccgctg
     6421 gcgcgtttgg tcataaagtt gtcggtctgc gccgaggagt cgccaccaaa ttccgggaac
     6481 atatcggtcc aggcttccac gtcatacaac gcgcccaggt tacgaccata atcgaaagaa
     6541 cccaaatctt tatatttcaa cccggcaaaa gcgagacgcg ttttttgctg tgcagtatca
     6601 ctctctgctt tattaccggc aaactctgct tcccaacgac catagccagt cagttgatcg
     6661 ttaatttgtg tgtcgccttt aaaaccaaaa cggatataac tctggtcgcc atctttactg
     6721 tcgttatcac tcatataatg catggcttta actttgccat agacatccag tttattaccg
     6781 tctttgttat atatttctgc ggcctgtacg gatgcagatg ccacaatgcc catcaccact
     6841 aatgccagag tgctcttttt cattttcatt cctgatttta attaacgcgc gaatattcag
     6901 cgggagagtc ccgttgaaaa caggaaagtt tttaacctga gattgttaaa gatatattac
     6961 agattaataa tattcttaaa atgtggtaat ttattaaatc tgtaataaaa gcgtaaacaa
     7021 ctgccgctac gcttgctgat cccgcgcaac aaaacgccat gctttgctcg cagatggttg
     7081 gcaaccgacg acagtcctgc taaaacgttc gtttgatatc atttttccta aaattgaatg
     7141 gcagagaatc atgagtgaca gccagacgct ggtggtaaaa ctcggcacca gtgtgctaac
     7201 aggcggatcg cgccgcctga accgtgccca tatcgttgaa cttgttcgcc agtgcgcgca
     7261 gttacatgcc gccgggcatc ggattgttat tgtgacgtcg ggcgcgatcg ccgccggacg
     7321 tgagcacctg ggttacccgg aactgccagc gactatcgcc tcgaaacaac tgctggcggc
     7381 ggtagggcag agtcgactga ttcaactgtg ggaacagctg ttttcgattt atggtatcca
     7441 cgtcgggcaa atgctgctga cccgtgctga tatggaagac cgtgaacgct tcctgaacgc
     7501 ccgcgacacc ctgcgtgcgt tgctcgataa caatatcgtt ccggtaatca atgagaacga
     7561 tgctgtcgct acggcagaga ttaaggtcgg cgataacgat aacctttctg cgctggcggc
     7621 gattctggcg ggtgccgata aactgttgct gctgaccgat caaaaaggtt tgtataccgc
     7681 tgatccgcgc agcaatccgc aggcagaact gattaaagat gtttacggca ttgatgacgc
     7741 actgcgcgcg attgccggtg acagcgtttc aggtctcgga actggcggca tgagtaccaa
     7801 attgcaggcc gctgacgtgg cttgccgtgc gggtatcgac accattattg ccgcgggcag
     7861 caagccgggc gttattggtg atgtgatgga aggcatttcc gtcggtacgc tgttccatgc
     7921 ccaggcgact ccgcttgaaa accgtaaacg ctggattttc ggtgcgccgc ctgcgggtga
     7981 aatcacggta gatgaagggg caactgccgc cattcttgaa cgcggcagct ccctgttgcc
     8041 gaaaggcatt aaaagcgtga ctggcaattt ctcgcgtggt gaagtcatcc gcatttgcaa
     8101 cctcgaaggc cgcgatatcg cccacggcgt cagtcgttat aacagcgatg cattacgccg
     8161 tattgccgga caccactcac aagaaattga tgcaatactg ggatatgaat acggcccggt
     8221 tgccgttcac cgtgatgaca tgattacccg ttaaggagca ggctgatgct ggaacaaatg
     8281 ggcattgccg cgaagcaagc ctcgtataaa ttagtgcaac tctccagccg cgaaaaaaat
     8341 cgtgtgctgg aaaaaatcgc cgatgaactg gaagcacaaa gcgaaatcat cctcaacgca
     8401 aacgcccagg atgttgctga cgcgcgtgcc aatggccttg gcgaagcgat gcttgaccgt
     8461 ctggctctga cgcccgcacg gctgaaaggc attgccgatg atgtgcgcca ggtatgcaac
     8521 ctcgccgatc cggtggggca ggtaatcgat ggcggcgtac tggacagcgg cctgcgtctt
     8581 gagcgtcgtc gcgtaccgct gggggttatt ggcgtgattt atgaagcgcg cccgaacgtg
     8641 acggttgatg tcgcttcgct gtgcctgaaa accggtaatg cggtgatcct gcgtggtggc
     8701 aaagaaacct gtcgcactaa cgcggcaacg gtggcggtga ttcaggacgc cctgaaatcc
     8761 tgtggcttac cggcgggtgc cgtgcaggcg attgataatc ctgaccgtgc gctggtcagt
     8821 gaaatgctgc gtatggataa atacatcgac atgctgatcc cgcgtggtgg cgctggtttg
     8881 cataaactgt gccgtgaaca gtcgacaatc ccggtgatca ctggtggtat aggcgtatgc
     8941 catatttacg ttgatgaaag tgcagagatc gctgaagccc tgaaagtaat cgtcaacgcg
     9001 aaaacccagc gtccgagcac atgtaatacg gttgaaacgt tgctggtaaa taaaaacata
     9061 gcagatagct tcctgcccgc attaagcaaa caaatggcgg aaagcggcgt gacgttacac
     9121 gcagatgcag ctgcactggc gcagttgcag gcaggccctg cgaaggtggt tgctgttaaa
     9181 gcggaagagt atgacgatga gtttctgtca ttagatttga acgtcaaaat cgtcagcgat
     9241 cttgacgatg ccatcgctca tattcgtgaa cacggcacac aacactccga tgcgatcctg
     9301 acccgcgata tgcgcaacgc ccagcgtttt gttaacgaag tggattcgtc cgctgtttac
     9361 gttaacgcct ctacgcgttt taccgacggc ggccagtttg gactgggggc ggaagtggcg
     9421 gtaagcacac aaaaactcca cgcgcgtggc ccaatggggc tggaagcact gaccacttac
     9481 aagtggatcg gtattggtga ttacaccatt cgtgcgtaaa taaaaccggg tgatgcaaaa
     9541 gtagccattt gattcacaag gccattgacg catcgcccgg ttagttttaa ccttgtccac
     9601 cgtgattcac gttcgtgaac atgtcctttc agggccgata tagctcagtt ggtagagcag
     9661 cgcattcgta atgcgaaggt cgtaggttcg actcctatta tcggcaccat tcaaacatct
     9721 ccccaagtct actaaagtct ttcaaaaccc cttataatcc gtgtattaaa gccccgttcg
     9781 tcttttgacg tctactaaag tccctcaaaa tctacggtca gatgggggta cttatggggg
     9841 tatttgctgt tcggtttagt ggaggtaccc ccaagtgaaa ctcaatgccc gtcaaataga
     9901 cacagccaag ccaaaagaga aggcttacaa gctggccgat ggtggcggtt tgtatctctt
     9961 ggtaaaacct aatggaggta aatactggcg acttaaatat cgtgtagctg gtaaagagaa
    10021 gctattggca ctaggtgtgt atcctgaggt tactctagcc gatgctcggg caaaacgtga
    10081 agatgcgaaa agaggtatcg ctggtggtat cgatccgatg gaagcgaaac gagaggaaaa
    10141 gattgcccgg gaaacgcagt taaacaacac cttcaaagat attgcccttg agtggcacag
    10201 cagcaaatta aaaaaatggt ctgctggtta tgcttcagac atcctcgaag ccttcaacaa
    10261 agatgtgttc ccttacattg gcaaaaaacc aatcgccgaa atcaaaccac ttgaacttct
    10321 gaatgtgctg cggcgcatcg aggggcgcgg tgctacagaa aaagccaaaa aagtgaggca
    10381 gcggtgcggg gaagttttcc gctatgcaat agtcactggt cgcgcagagt ataaccctgc
    10441 accagacctt actagcgcga tgcaaggcca tgaatctaat cattaccctt tccttacagc
    10501 taaagaatta cctgattttt tcaaggcatt gtccagttac tcaagaagcg cattggttgt
    10561 tatggcggct cgtctactga ttatcaccgg cttgcggact ggcgaactac gtggcgcatt
    10621 atgggatgaa attgatttca acaaggctat ctgggagata cccgcttcac gtatgaaaat
    10681 gcggcggcct catattgtgc cattgtctga tcaggctctt tcgcttattg ggaagattag
    10741 agaaataaca ggcaattacc ctcttatgtt tcccgggcgc aatgatccaa ggaaaacaat
    10801 gagtgaggcc agcataaacc aagtgtttaa gcgcattggc tacgctggac gtgtaactgg
    10861 tcatgggttc cggcacacta tgagcacgat tttgcatgag cagggctata acaccgcgtg
    10921 gatagaaacg cagctcgctc acgttgataa gaactcaatt cgtggcacat acaaccatgc
    10981 gcaatatctg gatggaaggc gggagatgct tcaatggtat gccgactata tggatgcgct
    11041 ggagaaggag gagaacgttg ttcatggttc gtttgggaaa cgagcttaac tgtatgaata
    11101 gaccgtgtta agcaatggta gtagacttat gtagacgaac aaagaatagg ctatgtctag
    11161 gctgatcccc gaaaacccgt acacccctac gggctggcat agccgtcaga attaggggcg
    11221 cggggtggcg tatggtgaga gccaaaaaac aagatttagc atggtttgat attagtaatt
    11281 atgaattttt aaatgattta accttgccgg acttgattca agaattagag tggcgcgatt
    11341 ttttattgcg tcatgcaaaa gatgacactg ctatattcaa agaagagtac gatataaaat
    11401 atgaaaggat tttttcgggc gatcctaacc taaccattct caatgaagaa gaggaagagg
    11461 tcgaagaatt tattcgcaaa gtaaatgatg aagccccatc attaagaaat gagtacgatg
    11521 atcttccctc attatcttca gctatggggg ttagtccagt aacattttca gagctggcca
    11581 tgtactcttt ctcatcgata gatcaaggct tttttaaaag agacgaagag gattgctacc
    11641 tcaaggcaaa cgctatgctt gcgagtgtta ctggaaacct aagtaattgt tcccctaaca
    11701 tcatactcgt ttctatagat ttagatgacg ccactgatga cgaaattatt accagcctga
    11761 ctcaccttct acctctatgg cgaaaagagt taaaagtacc agagagagag catgtcgctc
    11821 agaaaaggat tggattaaag acccttcaga agttgatatc taatagagtg atacctattg
    11881 ttgatctgct gatttggggt gagaagtcag gtaaggaagt gagcaatccg atgatttctg
    11941 ccttggtttt tagtgatgat ccgaaagata cgcaggctat taaggaatca ataaagcctt
    12001 ttgcacttga atctataagc gagagataca cccgcttgct tcagctttat gtaaacaaag
    12061 acagagaaat gagcttgata aaaatatctg atttaatgag tagagattta tagcaagcaa
    12121 aatcctacgt aaacgtttta agtaaatttc gcgatttccg ctttgaatac gctactgtgt
    12181 atttcaaagc ggataatctt ctcaaaaaaa tattttattt ttatccgcta tcacccattc
    12241 accggtttgt ttaatctcct ttctgtctac tgatgtccat taaagaagat gacagaatat
    12301 aggagtaaac atgtctcaat catttattcg tctttctgag gttcaacgcc gtactggtta
    12361 cagcaaagcg tggatttatc ggctcatcaa agaacagcga ttccctcaat ctgtaaagat
    12421 tggaagccga tcaattgcgt ttattgaaag tgaaattgaa gaatggatta atcagcgcat
    12481 cgctgagtcg cgtggcgagg tagcgtaatg aataagaaaa accgcccatt acaggcggct
    12541 aattcagata ttcgcgtatc tgatgttacg ccccttacaa aatcccttca agcaccaaag
    12601 cgcacaccga aaaagcatcg tgccagagtc tatatgctgc gtactggtat agagggatgg
    12661 acagaaaatg acattcttcg ctactgccgt ctgtcttctg gtcgtaacta tgcaacagag
    12721 ttagaacgcc agcttggaat cactctggag cgtatcgacg aaaagaatcc tgatggtatc
    12781 ggaacacacc ttcgctaccg tttctcctgc cgtggtgatg ttctgaaagt gatcactcat
    12841 attaaccatc ttgcgaacat aaatgatcac aacggacttt ctcagcagga aattgccgac
    12901 attctgaaac tctacccgga cgcgtttaac gccgcttaac ggagactgaa aatgaacatc
    12961 gaaaaaagca gattaatttc tgaggccgcc cctcatctga acgcctctct gagcacaatt
    13021 aacggtaatg aatttgccgc aattgtcccg gttattcctg gtcatatcgg tgggcgtgaa
    13081 accaatattg ttagcgcaaa agcgttacac aaagcgttgg gcgtgggaaa agacttctct
    13141 acatggatca ctgatcgcat ctctgaatat gacttcacca ttgggcacga ttactcagtc
    13201 cataaaacta tttccccaaa tttggggaaa agcccgaatg gcgcggctta cagaaagatt
    13261 aagcagtctg gcagacccgg caaagactat ctgttaagtg tcggaatggc gaaagaactg
    13321 gcaatgatcg aacgcaatga tcagggtcgc gctatccgcc gttatttcat ccagtgcgag
    13381 gaagaattac agcgtagcgt tcctgaaatc gccgcccgct atcgtcgcca gctaaaagcc
    13441 cgtatcagtg ccgcaaacaa ctttaagcca atgtgcgatg cgctgaatat ggcccgtgcc
    13501 gagcagggga aaacgacgca gcaacaccac tacacaaacg agagcaatat gatttctcgt
    13561 atcgttcttg gtgggctaac tgctaagcag tgggcgcgga taaatggcta ttctggcgaa
    13621 cctcgcgacc atatgaacgc agaacaactt gagcacctct catatctcga aagcaccaat
    13681 atcacgttaa ttgatatggg catggaatat gagcagcgca aaggagaact cacccgcctg
    13741 tcgcaacgct ggctcgctaa gcgtctggag gtggtccatg tttaagccga caggaacacc
    13801 acaacctcaa aaacgctaca aggatgccca cggagcactc gttactgtcg aaagcgtgtc
    13861 tcacaaccga gtgacgtttt atcgcgacgg gtatcaatcg ccatgcgtac aaccgctggc
    13921 gcgcttcatg aaggagttcg cggaggttaa caaatgctaa ccgtccagaa gaagatattt
    13981 tcactggctg gtatgtcgcc aaaatccagc aatatgacag caaagtctgg cattaataca
    14041 gcagatacaa gcaaagttta tcattttctg gtggtgggag cgaatgcctt aactatgtca
    14101 gaaattacgg tcgatggtgt tagcgttgag aaggtcggcg gctgcgccag agaatttctg
    14161 gtcgtagatg gctttctctg ctcgcgtagt gactccacaa aaaccttcgt ccacacgcgc
    14221 gacgttaacg aaatgagcgc gatgtattgt gcatctggtg cttccaatag tgagttttcg
    14281 gagtccataa aaaagagctt gccgttatgc ggcaacacgg tttatggtta taaggcacct
    14341 cataaaacgg gtgccgggtt tcgcagcccg gaaatgtacg aggcgacaca tgacgcgccg
    14401 agcgtctttt tttgtgccgt tagccagact cacacttttt tcagtgatgc ggttataatc
    14461 cgcgtcgctt gcaaaattat ggtgggctgg acagggcagc cgaaaggctg gccggtttcc
    14521 ttgtacgccg gtactgcgaa ctctgttcag tccaccacca gcgagtttcg cagctccggt
    14581 ggtgggaaga actcccagta caaggaggct gccacatgct ggctactacc actacccaaa
    14641 aaccgcaatt tatctggatt atcgccgcag ttcgccgcga ttgcccgaca attaccgcca
    14701 aaattcatca tattgctgcc gagtctgaac gcgatgctcg ccgttctctg gtgcgcgatc
    14761 acatctgctt ttttgctggt cgtatccgca tggaggtggc acatgattaa aacctacgat
    14821 gtgcatatgg atcccctcga acgcacaagc cagatcatca cactgacaga agtgattaac
    14881 gacattctgg tgagcaactc tccctcacga gacgaaagac tgaaggcgtt actcgcgata
    14941 ttggatctcg ccgttcgtga cgttcatttc ctgctggaag gtggcgaaat gccaggaaaa
    15001 acgggggcaa ccaatgaata actcaattaa tacccctcgc cttacgtccg cacttcaatt
    15061 aatcgagcaa gcagcggctg tcctggttgc tgtcagtctt tcggctgaag aaatggacgc
    15121 tactgatgtc gtggatgcga ttaaagcgtg ctcatctttg gttaacgatg cccgtgccga
    15181 gctggtaatt cttgggggtg aaaaatgaat atcaacttaa tttatcgtca tccgtgtgag
    15241 ctggaaattg aatcattgct ggggcgtgaa gagccatatc cagacacatt cactcccgca
    15301 gattgcgcga ctgaacggct taccagagcg cgcacaggtc tggttcatgt gatgaatgag
    15361 attgttccct cggtgggcgg ggaacaggcg acagtaatca atagctggct acaaaaagtt
    15421 acctccctga tagatatcag tttaatcgat gtggagagtg cgaaatgacc aacatccagc
    15481 tcattgaagc gcaatgtcgc atcgaacagg ttcagactgt tttagggttc tggcttgaag
    15541 gggccagccc cagcaacaga gacaagttaa tgattggcgc ggttatgtca ctgctcaatg
    15601 gcgtaccaga agctattcag gaagcggacg aattgttggg caaatatgag ttacagaatc
    15661 attcaggcga ggcgaaacat gaataatttc ttaactttcc atacagaagc aacgcctgac
    15721 ggcgtaaaca tcatgtaccg cagcaacgat ggcatgacag aacgcgttga ggccgtctca
    15781 tatattgatg ccgtaaatcg tctggatgcc ggggattatg acgataaacc agatgaaggt
    15841 atgtcaatac atctcgctat tgccgatggc ggcaaccagg gatatttcga ttacacatca
    15901 cagcataacg tcattatgtg gagatggctg atcgcaacag tattcatgct ggaaatgaga
    15961 gaggaaaacg gcactgtcag catcattgat gatactggca atccttccga agtggctgtt
    16021 tattccaacg gcatcgtcgc catgccgctg tatccagtag cagagcgcct cgctatggca
    16081 aacaacattg agggagcgat gatagaacgt tttggcatcg agtctggcac agaacgcgcc
    16141 atcattttct acagagccat gatggatgtg gaacaaggag cactgactcc atttggtcgt
    16201 gaaacgcttg ctgaacttca caacagcttt atagctgaac tgaatgaaaa cggcatgcca
    16261 gcggaaccag tgacgcactg aggatggagc catgattact aaaaatttcc gactgaatgc
    16321 gctggcaaat aagtatgcgt cggcactgta taaccacatt acctccacca gcggcgggga
    16381 ctatttcatg gttgatgcgg acggcgaggc cgtacgtgtg gaaatcgtta atggagtaaa
    16441 aggcgttcgc agcctgatcg atagctacac actggcagcc atgaaagtgt tctacccgca
    16501 gtgggaaacc gtggggatcg agcttcttga gcgttgcgtc actaaggacg gattgactga
    16561 cgtcgggcgt gagatatggc aaagcatggt taatgacatg ggcgcaactg tagcgggagg
    16621 ttctcatgcg tgaaaatgca gaaatggcgc ttagctccgc aatcggagag caggtggcaa
    16681 agattgctgg tgctgtgtgg attcataacc ttcattctac tggtgaagag aaaatggcaa
    16741 ttcagacgcc agagggacgc accattacta catctctgaa gccgtcagat gtttgtgatc
    16801 tgatttgcgc attcatgtac ccagcaatga ggactgtcca cggcgataag tggaaacttg
    16861 cgacaaccgc tgaatttgat atgtggctaa acaatgatgg catgctgact gattacggaa
    16921 taaccaagtg gcagatgctg gttagccata tcgcaaacgc tatagaccac gtggggtacg
    16981 gtgatgcgaa acattgatct tatccgtcag gttatcagtg cgtctgaaaa caactggcct
    17041 catgtgctgg gctgcctgaa cataaatgtc cctgactctc cgcgccgtca tgctccctgc
    17101 cctgcatgtg ggggcaaaga tcgattccgg ttcgatgaca acgggcgcgg tagcttcatc
    17161 tgtaatcagt gcggcgctgg tgatgggctg gatttaatta aacgcgtaaa taactgcgac
    17221 acaacagagg cggcgcttct tgccgctgat gttctgggta ttgattaccg gacaacggaa
    17281 acaccagaag ccaccagcca gaaacgggaa caactggaaa ccgagcgcca gcgacgcgaa
    17341 caggagcgcc tgaaaagggc agagaaggac gaacaacaaa gacgggatac gttttcccgt
    17401 cagtttgatg acatgcgcag aaaggctgta aacggcaaat ctgattatct ggttgcgaaa
    17461 ggggtaggtg attttacatt ccccgtgttg cccgatggat ctctgttgct ggcgctggtg
    17521 gataaatccg gcgcagtcac agcagcacag actattacat cacatggtga aaaaagactc
    17581 ctgacaggtt cagcaaagcg gggggcatat cacgccataa acgcgccaga aacaacacag
    17641 agcatcttaa tcgcagaagg gctggcaacg gcattatctg cccatttaat tcgtccagag
    17701 gcgctgacag tggcggcgat tgatgccggg aacctgttat atgtcgccca ggtactgcgg
    17761 gataaatttc cttcagcaca aatcatcatt gctgcggata acgaccacag cgaaggaaga
    17821 caaaacacgg ggagaatagc agcagaaaaa gcagctttat ctgtttctgg atgggtggca
    17881 ttacccccga cagatcacaa agcagactgg aatgattacc accaaaaaca cggcattaaa
    17941 tgcgccacag aagcgttcaa taagtcaatg taccaaccac agggtaatgg cgtgaaacag
    18001 gagccacaga ccattgaggg aagcgatttt aaggttatgg ataccgaccc actgaaacca
    18061 agaatagaaa gccgcgagga tggtatttat tgggtatctc cgagagctga cagccagagt
    18121 ggagaaatca tcaataacga aagctggtta tgttctccgt taagcgttat cggtactggc
    18181 agagacgata aagaccagta tctcattctt cgctggctgt cgtttggttc tgaaacgccg
    18241 acaaccgctg ccattccact ggctgatatt ggtgaacgtg aaggatggcg cacacttaaa
    18301 gctggtgggg taaatgtcac gaccaaaagc agcctcagag caatactggc agactggcta
    18361 caacgcagtg gctctcgtga attgtggcgt gttgctcatg ccactgtctg gcaatgcgga
    18421 gcgtacatca tgcctgatgg ggaaatcatc ggaacacctg aaaatcctgt gctgttcagc
    18481 gggagaagct cagccgcagc cggatatacc gtctcaggga gcgcgaaaag ctggcgtgat
    18541 aacgtggcgc gtctggcctt tggtaactat tcaatgatga ccgggatcgg cgcagcactg
    18601 gcagcgccat tgattgggct ggtgggcgct gacgggttcg gcattcattt ctatgagcag
    18661 tcgagcgcag gtaagaccac cacggcaaac gtggcgagca gcttatacgg caaccctgat
    18721 ttactgcggc tgacgtggta cggaaccgcg ctggggctgg caaatgaggc cgccgcccac
    18781 aatgacggac taatgccgct tgatgaagtt ggtcagggcg ctgatcctgt cagcgtttca
    18841 cagtctgcct atgcgttatt taacggtgta gggaaactgc aaggcgctaa agatggtgga
    18901 aaccgggatc taaaacgctg gcgtacagtg gcaatcagca ccggagaaat ggatttagaa
    18961 acatttatcg ctacttccgg gcgaaaaacc aaagccgggc aactggtgcg actgctgaat
    19021 attccgttga gtaaagcagt acgctttcac gattaccaga acggaaaaca gcacgcagac
    19081 gcactgaaag acgcttacca gcatcaccac ggcgcagccg ggcgtgagtg gattaaatgg
    19141 ctggcagacc accagcaaca ggctattaaa accgttcgtg attgcgaaag cagatggaga
    19201 aacctgatcc catccgatta tggtgagcag gttcaccgtg tagccgcgcg atttgccatt
    19261 ctggaggccg cattgctgtt aggcgaggtt gtaacaggct gggatgctca gacatgccgt
    19321 gatgcgatac agcacagcta taacgcatgg ttgcgcgagt tcggcacagg taacaaagaa
    19381 catcagcaga ttattgaaca aacggaggca tttcttaatg cctatgggct tagccgtttt
    19441 gcaccatttc catacagccc ggcagatttg cccatcaaag atttagccgg ataccgtcag
    19501 cgtggagaac atgacgaaag cccaatgatt ttctacacat tcccggccac atttgaaaag
    19561 gagatcgcat gtggtttcaa cgcaaaacag tttgctgaag tgttgaaaaa agccgggatg
    19621 ctaaccccac caaacagcgg tcgtggatac caaagaaaat caccacgtat tcagggacga
    19681 caaataaacg tttatgtact caattaccag ccaggagatt ataactcatc tgaagaatga
    19741 gcttcttcat gtgcgtagaa aaggtgttgg ttcagttggt tcaatttgta aatggtattg
    19801 ttttataagg attttattct ttttattgaa ccaacactga accaacaaca cggtattttg
    19861 aaccaacact gaaccaacaa cacggtattt tgaaccaaca caatgtgact gaattgatgc
    19921 gcacaacacc tggctggcat cagagagtgt tttacgagac tttcgtaaaa tcctgtgtac
    19981 aagggcgtga cgtttttgaa agtgagcact acgaaatttt cgtagttcaa aaaacagcct
    20041 ctgagaagtt gttatgcctg ttcagcaaac catccgcata gctgatcgcg aatcaaatta
    20101 ccaatggagc cagaagcaag ggcagaactg aaaagcgcct gccgtgaaga gtaatgcgac
    20161 accataaata tagtttttag agtccataaa aaacctgtca aaacctgaca cacagaacga
    20221 cgccaccagc tactgagcgg tggcattttt ttgtgctatt tgtttcatat tctgcaatta
    20281 cgatgatgaa tattgcgatt tgtgaaacta taataactgt tgttttatac agttataagg
    20341 gggcgttatg gctatttcag taaagccggt attgataagt gagaagcaaa tggaagcgat
    20401 aaagaaaatt caggaagagc agcgtaaaaa atcaggaatt ggagtagcgc caactctgca
    20461 tgaaattgca cgagggttaa tagataaggc gctggcaggc tgtatgtgaa aatggatggc
    20521 atcgcatgga actaaaattt attgataacc ctgtgcgatt acaggccttt cttaacgagc
    20581 caggcaatac cgaaaatatt gttgagccgg ggcactcgta ctacatcaag cctgatgcgg
    20641 tatatctcgg catctacgaa ggattagtgc tggctggcgt tcatgaagtg cgtaacttct
    20701 ggcatagcgt tgttgaatgc catgcggtgt acgaccccgg attccgtggt gaatatgcac
    20761 tgcaagggca tcgattattc tgcaaatggc ttctcgaaaa ctcaccattc cttaacagca
    20821 tcactatggt tcctgacacc acgaaatatg gacgggcaat tatccgtttg cttggcgcta
    20881 cccgtgttgg tcaccttgat gatgcttata tcagatgtgg taaacccgtc ggcgtaacgc
    20941 tttatcagtt aactcggcaa caatataagg aattcagcga atgttaatta cccatatagc
    21001 tcataaacat ctcaatcgtg ccgtatacga aaaaggcggt gatggtggtg cctctaaagc
    21061 tcaggcgaag gcccagcagc aggcaattga tttgcagcgc gagcagtgga atacggtgat
    21121 gaataatctc aagccgtatg cagaagtcgg attgcctgct ttacaacaac tgcaaggact
    21181 gatgactctg gaagggcaga ataaagccgc gaatgatttc tttggttctg gtttatataa
    21241 aacacaggca gatcaggccc gttatcagaa ccttgtctca gcagaagcta ccggggggct
    21301 tggctcaaca gctaccagta accagttatc ttccattgcg cccatgcttt ataacaattg
    21361 gctcagtggg caaatgcaaa attatggaaa cctgctaaat gtcgggatga atgcggcatc
    21421 agggcaggca acagcagggc aaaactacgc caataatacc gggcaactct tgcaggggct
    21481 tggcgccatt cgtgcaggtc aggcgcagca gccatccagt cttgcgcgtg gtattggtgg
    21541 ggcggcatca ggcgctttag cgggtgcgca acttggttcc gttgttccgg gtataggtaa
    21601 tgtcgccggg gc
//
LOCUS       DAJVTL010000067        21577 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.067, whole genome shotgun sequence.
ACCESSION   DAJVTL010000067 DAJVTL010000000
VERSION     DAJVTL010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21577
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.067"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            290..1480
                     /locus_tag="OQQ26_002460"
     CDS             290..1480
                     /locus_tag="OQQ26_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001483446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HCS1857888.1"
                     /translation="MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPL
                     NKPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEETKLAQTV
                     SNIIGTTDENGQYTGLKALLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFG
                     YISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTVTSTTSTAYATARALGLRAKI
                     DQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIRRDGFRFWGN
                     RTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKT
                     NGYIVDATCWFSEESNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYQANLVTS
                     VNSN"
     gene            1493..2010
                     /locus_tag="OQQ26_002461"
                     /pseudo
     CDS             1493..2010
                     /locus_tag="OQQ26_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554312.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
     gene            2067..2342
                     /locus_tag="OQQ26_002462"
     CDS             2067..2342
                     /locus_tag="OQQ26_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001719230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HCS1857889.1"
                     /translation="MNKENVITLDNPVKRGEQVIEQVTLMKPNAGTLRGVSLAAVANS
                     EVDALIKVLPRMTAPMLTEQEVAALELPDLVALAGKVVGFLSPNSVQ"
     gene            2375..2494
                     /locus_tag="OQQ26_002463"
     CDS             2375..2494
                     /locus_tag="OQQ26_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HCS1857890.1"
                     /translation="MADVAVIFHWPPSELYPMSLTELITWREKALRRSGNTNE"
     gene            2487..4934
                     /locus_tag="OQQ26_002464"
     CDS             2487..4934
                     /locus_tag="OQQ26_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016236410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1857891.1"
                     /translation="MSNNVKLQVLLRAVDQASRPFKSIRTASKSLSGDIRETQKSLRE
                     LNGHASRIEGFRKTSAQLAVTGHALEKARQEAEALATQFKNTERPTRAQAKVLESAKR
                     AAEDLQAKYNRLTDSVKRQQRELAAVGINTRNLAHDEQGLKNRISETTAQLNRQRDAL
                     ARVSAQQAKLNAVKQRYQAGKELAGNMASVGAAGVGIAAAGTMAGVKLLMPGYEFAQK
                     NSELQAVLGVAKDSAEMAALRKQARQLGDNTAASADDAAGAQIIIAKAGGDVDAIQAA
                     TPVTLNMALANRRTMEENAALLMGMKSAFQLSNDKVAHIGDVLSMTMNKTAADFDGMS
                     DALTYAAPVAKNAGVSIEETAAMVGALHDAKITGSMAGTGSRAVLSRLQAPTGKAWDA
                     LKELGVKTSDSKGNTRPVFTILKEMQASFDKNRLGTAQQAEYMKTIFGEEASSAAAVL
                     MTAASTGRLDKLTAAFKASDGKTAELVNIMQDNLGGDFKEFQSAYEAVGTDLFDQQEG
                     ALRKLTQTATKYVLKLDGWIQKNKSLASTIGLIAGGALVLTGIIGAIGLVAWPVITGI
                     NAIIAAAGAMGAIFTTVGSAVMTAIGAISWPVVAVVAAIVAGALLIRKYWEPVSVFFG
                     GVVEGLKAAFAPVGELFTPLKPVFDWLGEKLQAAWQWFKNLIAPVKATQDTLNRCRDT
                     GVMFGQALADALMLPLNAFNKLRSGIDWVLEKLGVINKESDTLDQTAARTHAATYGTG
                     GYIPATSSYAGYQAYQPVTAPAGRSYVDQSKNEYHISLTGGTAPGTQLDRQLQDALEK
                     YERDKRARARASMMHDG"
     gene            4949..5428
                     /locus_tag="OQQ26_002465"
     CDS             4949..5428
                     /locus_tag="OQQ26_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000978924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1857892.1"
                     /translation="MMLALGMFVFMRQTLPHQTMQRESDYRWPSNSRIGKRDAYQFLG
                     VGEENITLAGVLYPELTGGKLTMTTLRLMAEEGRAWPLLDGTGMIYDMYVISKVSETG
                     SIFFADGTPRKIDFTLSLTRVDESLAALYGDIGKQAESLIGKAGSMATKFTGMTGAG"
     gene            5428..6591
                     /locus_tag="OQQ26_002466"
     CDS             5428..6591
                     /locus_tag="OQQ26_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016157990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HCS1857893.1"
                     /translation="MLDALTFDAGSTLTPDYMLMLDSRDITGNISDRLMSMTLTDNRG
                     FEADQLDIELNDADGQVGLPVRGAVLTVYIGWKGFALVCKGKFTVDEVEHRGAPDVVT
                     IRARSADFRGTLNSRREGSWHDTTLGAIVEAIASRNRLEASVAPSLAGIKIPHIDQSQ
                     ESDAKFLTRLAERNGGEVSVKMGKLLFLKAGQGVTASGKKIPQITITRSDGDRHHFAI
                     ADRGAYTGVMAKWLHTKDPKPQKQKIKLKRKKKEKHLRAPEHPKAKPVRQKKAPKVPE
                     AREGEYMAGEADNVFALTTVYATKAQAMRAAQAKWDKLQRGVAEFSISLATGRADIYT
                     ETPVKVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVEYETEGDE"
     gene            6673..6891
                     /gene="ogrK"
                     /locus_tag="OQQ26_002467"
     CDS             6673..6891
                     /gene="ogrK"
                     /locus_tag="OQQ26_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage transcriptional regulator OgrK"
                     /protein_id="HCS1857894.1"
                     /translation="MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYES
                     VQRYIVKPGEVHAVRPHPLPSGQQIMWM"
     gene            complement(7164..8525)
                     /gene="yegQ"
                     /locus_tag="OQQ26_002468"
     CDS             complement(7164..8525)
                     /gene="yegQ"
                     /locus_tag="OQQ26_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HCS1857895.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM
                     TPQGNINFTLEHMENAKGEAMPVAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
                     HGK"
     gene            complement(8673..9005)
                     /locus_tag="OQQ26_002469"
     CDS             complement(8673..9005)
                     /locus_tag="OQQ26_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310915.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HCS1857896.1"
                     /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIA
                     SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASAKANGT
                     SQTVKDNT"
     gene            complement(9151..9873)
                     /gene="baeR"
                     /locus_tag="OQQ26_002470"
     CDS             complement(9151..9873)
                     /gene="baeR"
                     /locus_tag="OQQ26_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HCS1857897.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
                     QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
                     LTPAEFRLLKTLSHEPGKVFSREHLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRIV"
     gene            complement(9870..11273)
                     /gene="baeS"
                     /locus_tag="OQQ26_002471"
     CDS             complement(9870..11273)
                     /gene="baeS"
                     /locus_tag="OQQ26_002471"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeS"
                     /protein_id="HCS1857898.1"
                     /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
                     HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
                     WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
                     KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
                     ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
                     TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
                     LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFAD
                     SAPGVSDDQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
                     VSITVELPLERDLQREV"
     gene            complement(11270..12685)
                     /locus_tag="OQQ26_002472"
     CDS             complement(11270..12685)
                     /locus_tag="OQQ26_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857899.1"
                     /translation="MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESP
                     LHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELL
                     LARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY
                     ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSK
                     GTGLSPLAIAGLVAVGVVALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIG
                     SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT
                     LGLSLVTLLFMTTALLGWYYVLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS
                     LLSMIMQLSMSIGVTIAGLLLGLFGSQHVSVDSGTTQTVFMYTWLSMALIIALPAFLF
                     ARVPNDTHQNVAISRRKRSAQ"
     gene            complement(12686..15763)
                     /gene="mdtC"
                     /locus_tag="OQQ26_002473"
     CDS             complement(12686..15763)
                     /gene="mdtC"
                     /locus_tag="OQQ26_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HCS1857900.1"
                     /translation="MKFFALFIYRPVETILLSVAITLCGILGFRMLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN
                     GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST
                     QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQG
                     ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
                     AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
                     EQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAL
                     TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
                     LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
                     VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA
                     DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ
                     QIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSNDLAALREWEPKIRK
                     KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY
                     QPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL
                     SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI
                     IAAIATVYIVLGILYESYVHPLTILSTLPSTGVGALLALELFNAPFSLIALIGIMLLI
                     GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSG
                     GDGSKLQQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
     gene            complement(15764..18886)
                     /gene="mdtB"
                     /locus_tag="OQQ26_002474"
     CDS             complement(15764..18886)
                     /gene="mdtB"
                     /locus_tag="OQQ26_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HCS1857901.1"
                     /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS
                     ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM
                     TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAE
                     NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTT
                     NIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFS
                     LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN
                     RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD
                     NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ
                     INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT
                     SLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA
                     LYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVLPLSSIAKV
                     EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQTIMDTEKTLNLPVDITTQFQGST
                     LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGS
                     ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTT
                     LAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTK
                     SRFARHEEEA"
     gene            complement(18886..20133)
                     /gene="mdtA"
                     /locus_tag="OQQ26_002475"
     CDS             complement(18886..20133)
                     /gene="mdtA"
                     /locus_tag="OQQ26_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HCS1857902.1"
                     /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQ
                     QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTIIAANTVTVRSRVDGQLMALH
                     FQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLVKTNLV
                     SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS
                     SGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL
                     LSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNE
                     GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVE
                     AQSATTPEEKATSREYAKKGARS"
     gene            20731..20787
                     /locus_tag="OQQ26_002476"
     CDS             20731..20787
                     /locus_tag="OQQ26_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HCS1857903.1"
                     /translation="MMKLLIIVVLLVISFPAY"
     gene            21005..>21577
                     /locus_tag="OQQ26_002477"
     CDS             21005..>21577
                     /locus_tag="OQQ26_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HCS1857904.1"
                     /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGL
                     VTFRDELLADSLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
                     ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFRGEEDKRFAFFSIG
                     VQGADMKTLAQISVRQPLPLQGLQFRQGLQF"
BASE COUNT         5134 a         5813 c         5976 g         4654 t
ORIGIN      
        1 gaccagcaac ctattgatca aaaaaccaag atattagcta aaaaaaatca gcatacttga
       61 gaccaagctc aatgtccgct cctcgctcaa agcagactgt cagatttgat agcatttggg
      121 ctatgtaaat tgtcaggcgg aaaatgagtg agtacaaatc aggacaggcg ggcgaattgc
      181 ccgcattttc tttatctgtt gtttcatccc ctgaccagcc aggtcaaata gcgtctcatg
      241 ctctgcacaa cagaaaatag ttgcacccat taaccacgga gttaaacgga tgagtgacta
      301 tcatcacggc gtgcaggtgc tggagattaa cgacggcacc cgcgtcattt ccaccgtatc
      361 cacggccatt gtcggcatgg tctgcacggc cagcgatgca gatgcggaaa ccttccccct
      421 caataaaccg gtgctgatta ccaatgtgca gagcgcaatt gcaaaggccg gtaaaaaagg
      481 cacgctggcg gcgtcgttac aggccatcgc tgaccagtca aaaccggtca ccgttgttgt
      541 gcgcgtggaa gacggcaccg gcgacgacga agaaacgaag ctcgcgcaga ccgtttccaa
      601 tatcatcggc accaccgacg aaaacggtca gtacaccgga ctgaaagccc tgctggcggc
      661 ggagtcggta accggtgtta aaccgcgcat tctcggtgtg ccgggactgg ataccaaaga
      721 ggtggctgtt gcactggcat cagtctgtca gaagctgcgc gctttcgggt atatcagcgc
      781 atggggctgt aaaaccattt ccgaggtgaa agcctaccgc cagaatttca gccagcgtga
      841 gctgatggtc atctggccgg atttcctcgc atgggatacg gtcaccagta ccacctccac
      901 cgcgtatgcc accgcccgtg cgctggggct gcgcgctaaa atcgaccagg agcagggctg
      961 gcataaaacg ctgtccaacg tcggggtgaa cggtgttacc ggcatcagcg cgtccgtatt
     1021 ctgggatttg caggagtccg gcaccgatgc tgacctgctt aacgagtcag gcgtcacaac
     1081 gctgattcgc cgtgacggtt tccgcttctg gggtaaccgt acctgctctg atgacccgct
     1141 gttcctcttt gaaaactaca cccgcaccgc gcaggtgctg gccgacacga tggctgaggc
     1201 gcacatgtgg gcggtggaca agcccatcac cgcaacgctg attcgcgaca tcgttgacgg
     1261 catcaatgcc aaattccgtg agctgaaaac aaacggctat atcgtggatg cgacctgctg
     1321 gttcagcgaa gaatccaacg atgcggaaac cctcaaggcc ggaaaactgt atatcgacta
     1381 cgactataca ccggtgcctc ctctcgaaaa cctgaccctg cgccagcgta ttaccgataa
     1441 ataccaggca aatctggtca cctcggttaa cagcaattaa ggagcctgac cgatggcaat
     1501 gccgcgcaaa ctcaagttaa tgaacgtctt tctgaacggc tacagctatc agggcgttgc
     1561 aaagtccgtc acgctgccaa aactgacccg taaactcgaa aactatcgcg gtgcggggat
     1621 gaacggaagc gcaccggtag acctcggcct tgatgacgat gcgctgtcaa tggagtggtc
     1681 gctcggggct tcccggattc ggttatctgg gagctctacg ccgcaaccgg cgtggatgcc
     1741 gtaccgattc gttttgctgg ctcttaccag cgcgacgata ccggcgaaac ggtggccgtc
     1801 gaggtggtca tgcgtggccg tcagaaagaa atcgacaccg gcgaggggaa acagggagaa
     1861 gacaccgagt cgaaaatctc cgtggtctgc acctatttcc ggctgacgat ggacggtaag
     1921 gagctggtcg aaatcgacac catcaacatg attgagaagg tgaacggtgt cgaccggctg
     1981 gagcaacacc gccgcaatat cggcctgtga ttttcatccg gtcagccagg ctgaccggtt
     2041 aaccctgatt cagaagtgag aaaaccatga acaaagaaaa tgtgattacc ctggacaatc
     2101 cggtcaagcg tggtgagcag gttatcgaac aggtcacgct gatgaaaccc aatgccggga
     2161 cgctgcgcgg tgtcagtctg gctgcggtcg caaactccga agtcgatgca ctgattaagg
     2221 tgctgccgcg catgacggca ccgatgctga ccgagcagga agtcgccgcg ctggaactgc
     2281 ctgaccttgt ggcgctggcc ggtaaggtgg tcggtttttt gtcgccgaac tcggtgcagt
     2341 aacgttcccg aaaaatctgt cggtcgatga gctgatggcg gatgtggcag tgatatttca
     2401 ctggccgcca tcagaactgt atcccatgag tctgaccgaa ctcatcacat ggcgcgaaaa
     2461 ggcgctccgg cgaagcggaa acacgaatga gtaacaatgt aaaattacag gtattgctca
     2521 gggctgttga ccaggcatcc cgcccgttta aatccatccg cacagcgagc aagtcgctgt
     2581 cgggggatat ccgggaaaca caaaaatcac tgcgcgagct gaacggtcac gcatcccgta
     2641 ttgagggatt tcgcaagacc agtgcacagc tcgccgtgac tggtcatgca cttgaaaagg
     2701 cacggcagga ggccgaagcc cttgccacac agtttaaaaa caccgaacgt cccacccgtg
     2761 ctcaggcgaa agtgctggaa tccgcaaagc gtgcggcgga ggacttacag gcgaaatata
     2821 accgcctgac ggattccgtt aaacgccagc agcgggaact ggccgctgtg ggaattaata
     2881 cccgcaatct tgcacatgat gagcagggac tgaaaaaccg tatcagtgaa accaccgcac
     2941 aacttaaccg tcagcgcgac gcgctggcgc gtgtcagtgc gcaacaggca aaacttaacg
     3001 cagtaaaaca gcgttatcag gccggaaagg aactggccgg aaatatggcc tcagtaggcg
     3061 ctgccggtgt ggggattgcg gcggcgggaa cgatggccgg agttaagttg ctgatgcccg
     3121 gttatgagtt tgcgcagaaa aactcagaat tgcaggccgt gctaggagtg gcaaaagact
     3181 ccgccgaaat ggccgcgcta cgcaagcagg cgcgccagct cggtgacaat accgccgcct
     3241 cagcggatga tgcggccggt gcgcagatta tcattgcgaa agcgggtgga gatgttgatg
     3301 ccattcaggc ggcaacgccg gtcacgctga atatggcgct ggcgaaccgc cgcacgatgg
     3361 aagaaaacgc cgccctgctg atggggatga aatccgcctt tcagctttca aacgataagg
     3421 ttgctcatat cggggatgtt ctctccatga cgatgaacaa aaccgccgcc gattttgacg
     3481 gcatgagcga tgcgctgacc tatgccgcac ctgtggcaaa aaatgccggt gtcagcattg
     3541 aagaaaccgc cgcaatggtc ggggcactgc atgatgcaaa aattaccggt tcaatggcgg
     3601 ggacgggaag ccgtgccgtg ttaagccgcc tgcaggcacc gacgggaaaa gcatgggatg
     3661 cactgaaaga gcttggtgtg aaaacctcag acagcaaggg aaacacccgg ccagtattta
     3721 ccattctgaa agaaatgcag gccagttttg ataaaaaccg gctcggtact gcccagcagg
     3781 ctgaatacat gaaaaccatt ttcggggagg aggccagctc agccgctgct gtgctgatga
     3841 ctgccgcctc aaccggaagg ctggacaaac tgaccgctgc gtttaaagcc tcagacggga
     3901 agaccgcgga gctggtaaat atcatgcagg acaacctcgg cggtgacttt aaggagtttc
     3961 agtccgctta tgaggcggta gggactgacc tgtttgacca gcaggaaggc gcgctgcgta
     4021 agctcacgca gacggccaca aagtatgtgt taaaactcga cggctggata cagaaaaaca
     4081 aatcactggc gtcaactatc ggcctcattg ccggtggcgc actggtgctg actggcatca
     4141 tcggtgccat tggtcttgta gcctggccgg ttatcaccgg catcaatgcc attatcgcgg
     4201 cagcaggcgc aatgggggca atcttcacga cggttggcag tgctgttatg acggccatcg
     4261 gggcgattag ctggccggtt gtggccgtgg tggccgccat tgtcgccggg gcgttgctta
     4321 tccgtaaata ctgggagcct gtcagcgtat tcttcggcgg tgtggttgaa gggctgaaag
     4381 cggcatttgc gccggtgggg gaactgttca cgccacttaa gccggtgttt gactggctgg
     4441 gtgaaaagtt acaggccgcg tggcagtggt ttaaaaacct gattgcaccg gtcaaagcca
     4501 cccaggacac cctgaaccgt tgccgtgaca cgggcgtcat gttcgggcag gcactggctg
     4561 acgcgctgat gctgccgctt aatgcgttca acaaactgcg cagcggtatt gactgggtac
     4621 tggaaaaact cggcgtcatc aacaaagagt cagacacact tgaccagacc gccgccagaa
     4681 ctcatgccgc cacgtatggc accggtggtt atattccggc gaccagctct tatgcaggct
     4741 atcaggctta tcagccggtc acggcaccgg ctggccgctc ttatgtggac cagagtaaaa
     4801 acgaatatca catcagcctg accggtggta ctgcgccggg gacacagctt gaccgccagt
     4861 tacaggatgc gctcgaaaaa tacgagcggg ataaacgagc gcgcgcccgt gccagcatga
     4921 tgcatgacgg ttaaggaggt gacgaaaaat gatgctcgcg ttaggtatgt ttgtttttat
     4981 gcgccagacg ctgccacatc agaccatgca gcgtgaatca gattatcgct ggccgtcaaa
     5041 ttcccgtatc ggtaaacggg atgcctatca gtttctcggt gtaggtgagg agaacatcac
     5101 acttgccggt gtgctttatc ccgaactgac tggcggaaag ctgacgatga ccacgctcag
     5161 actgatggca gaggaaggcc gggcgtggcc gttgctggat ggcaccggca tgatttacga
     5221 catgtatgtc atcagcaagg tgagtgaaac agggagtatt ttctttgcag acggcacacc
     5281 ccggaaaatt gattttacgc tgtcgctcac ccgcgttgat gagtcactgg ccgcgcttta
     5341 tggcgatatc ggtaaacagg cggaatcgct catcggtaag gctggcagta tggcgactaa
     5401 attcacgggt atgacggggg cgggataatg ctggatgcgc tgacatttga tgcaggcagt
     5461 acgctgacgc cggattacat gctgatgctc gacagcaggg atattaccgg caatatcagc
     5521 gaccgtctga tgagcatgac cctgacggat aaccggggct ttgaggctga ccagcttgat
     5581 attgaactga acgatgccga cgggcaggtc gggctgccgg ttcgtggcgc tgtcctgacg
     5641 gtgtatatcg gctggaaagg ttttgccctg gtatgcaaag ggaaatttac cgttgatgag
     5701 gttgaacacc ggggcgcacc ggatgtggtc accatccgcg cccggagtgc agattttcgc
     5761 gggacgctca attcccgccg ggaaggctca tggcatgaca ccacgctcgg tgcgattgtt
     5821 gaggcgatag cctcccggaa caggctggaa gccagtgtcg ctccgtcact ggccggaatt
     5881 aaaattccgc acatcgacca gtcgcaggag tctgatgcga aattcctgac ccgccttgct
     5941 gaacgcaacg gcggtgaggt gtcggtaaaa atgggaaaac tgctgtttct caaagcgggg
     6001 cagggggtga cggccagcgg taaaaaaatc ccgcagatta ccatcacccg cagcgacggc
     6061 gaccgtcatc attttgcgat tgctgaccgt ggagcctaca ccggcgtaat ggcaaagtgg
     6121 ttacacacca aagacccgaa gccacaaaag cagaagataa aactgaaacg caaaaagaaa
     6181 gagaaacacc tgcgcgcacc ggagcacccg aaagcgaaac cggtcaggca gaagaaagcg
     6241 cctaaagtac cggaagcgcg cgaaggtgaa tacatggccg gtgaggctga taacgttttt
     6301 gccctgacta cggtatatgc cacaaaagcg caggccatgc gcgccgctca ggcgaagtgg
     6361 gataagctgc aacggggcgt ggcggagttc tccatcagtc tggctactgg tcgggcagat
     6421 atttacacgg aaacgccggt caaagtgtca ggttttaagc gcgtcataga cgagcaggac
     6481 tggacaatca ctaaggtgac acactttctg aataatagcg gcttcacgac gtccttagag
     6541 cttgaggtca ggctttctga tgtggagtac gaaacagaag gtgatgagta atgttttgtt
     6601 tttatctgtt tgttttataa gggtaaatta actaaaatgg caccatcaac aaaaccggaa
     6661 gaggtgctcg cgatgtttca ttgtccttta tgccagcatg ccgcacatgc gcgtacaagc
     6721 cgctatatca ctgacacgac aaaagagcgt tatcaccagt gtcagaacgt gaattgcagt
     6781 gccacgttca tcacttatga gtcggtacag cgatacatcg tgaagccggg agaagtccac
     6841 gccgtaaggc cgcacccgtt gccatcaggg cagcaaatta tgtggatgta attacaaaca
     6901 gaaagcccct cagtcgaggg gcttttttgt cgatgtggtc aatgtgtgga cgtgaccaga
     6961 aataaatcct tttatttcaa tttattgtac gtaaaaaata agcccgtgta agggagatta
     7021 cacaggctaa ggaggtggtt cctggtacag ctagcatttt atgggttatg tttttcagcg
     7081 aaacggatga taaccttaat aaatgcaact gtatgtgatc ggtttctaag aattttccat
     7141 ccgggaaaaa taatcgaaat taatcactta ccgtgggggt tacgcgtggt ttccccggag
     7201 aaattacgca ttagcagcgc gtaatttagc tcaagatcct gcgggaccgg gagccacaca
     7261 gtataaccat cgcctggtgc gaccggcata gcttcgcctt tggcgttttc catgtgctca
     7321 agggtaaagt taatgttgcc ttgcggcgtc atcagctcaa gactgtcgcc aacggagaat
     7381 ttatttttca ccgctaccgc tgcgaggtcc cccttgcgct caccggtaaa ctcaccaaca
     7441 aactgctggc ggtcagaaac tgaataaccg tattcgtagt tctgataatc gtcgtgagta
     7501 tgacgacgca ggaaaccttc ggtatagcca cgatgcgcca gaccttccag agtttccagc
     7561 aggctggtat cgaacggttt tcccgcagcg gcgtcatcga tagctttgcg gtaaacctgt
     7621 gcggtgcgtg cgcaatagta gaaagatttg gtacgacctt cgattttcag cgaatgcacg
     7681 cccattttgg tcaggcgttc tacatgggcg atggcgcgca gatctttcga gttcatgatg
     7741 taagtgccgt gctcatcttc aaacgcggtc atatactcgc ccggacgctg ggcctcttcg
     7801 atcataaaca ctttgtcggt tggcgcgccg atacccagcg tcggctcaac attttgcacc
     7861 ggaatcggct cgtacttgtg tacgatgttg ccaacgtcat cttctttccc ttcctggacg
     7921 ttgtactccc agcggcaggc gttggtgcag gtaccctggt tcggatcgcg cttgttgata
     7981 tagccagaga gcaggcagcg accggagtag gccatgcaca gtgcgccgtg aacgaagatc
     8041 tcgatctcca tatccggcac ctgattgcgg atctcttcaa tctcttcaag cgacagctcg
     8101 cgagagagga tcacgcgggt caggcccatt tgctgccaga atttcaccgt cgcccagttt
     8161 acggcgttag cctgcaccga gaggtggatc ggcatttcag ggaagtgctc acgcaccagc
     8221 ataatcagcc ctggatcgga cataatcagc gcatccggcc ccatttccac caccggtttc
     8281 aggtcacgga taaaggtttt cagcttggcg ttgtgcggtg caatgttgac cacgacataa
     8341 aactttttcc ccagcgcgtg ggcttcattg atgccgagct gaagattttc gtggttgaat
     8401 tcgttgttgc gcacacgtag ggagtaacgc ggctggcccg cataaacagc atctgcgcca
     8461 taagcgaaag cgtaacgcat atttttcagc gttcccgccg gggaaaggag ttccggttta
     8521 aacataattc tctcgttctg atgacaggtc agatccgctt cacctgatga agcggttagg
     8581 ggagtgcccc cactttaagg gcgggcattg tagcgctgta ggggggatct ggtaaagcgc
     8641 cggacgccaa caacccacgc ccggcatcgt aattacgtat tgtctttcac cgtctggctt
     8701 gtgccattgg ctttagcgga ggcaattccg gtttcacgag attgcgcggt ggcgtacatc
     8761 tggctggagc cgataatttg atgattggcg gctttcagat tgaaatagaa tttgccgttg
     8821 cttgccgttt ttttctcata gcgctcttct tgcgggctgt tgctacgcac cgacgcgatg
     8881 cccttttccg cagaggcttt tgaggtatac agctcgctgg tgaggatagt ctcaccattg
     8941 cccgctttta gcacaaaccg gaactgatta tcactgctct tactgagttc aaaccaacca
     9001 gccataatga ctccttgatt gaaattgctt atcgaaaaca gcatctaaag gtgctgttta
     9061 ctgattaaag tatgagcgat tttctgatgc ctgccagggc ggagagataa tgtcagtttg
     9121 ctgaccatgc gtgggataat gttgctaaaa ctaaacgatg cggcaggcgt cggcttccca
     9181 gcggtaaccg acgccgtaaa cggcgcggat aaatgactgt tcggcgtcga gagattccag
     9241 cttgcggcgc aggtttttaa tgtggctgtc gatggtgcgg tcggttacta cgcggtagtc
     9301 gtcataaaga tgattgagca aatgctcgcg ggagaatact tttcctggtt catgagagag
     9361 cgttttcagc agacgaaatt ccgcaggcgt caggtcaagc attttaccgc gccatgaagc
     9421 ctgaaaacga ccttcgtcga taatcaacgg gctttcagca tcctgttgct gcaactcgcg
     9481 ctgcggtttg caacggcgca aaatggtttt gacgcgcgct accacttccc gtgggctgta
     9541 cggcttacag atataatcat ctgcgccaat ctccagcccc agcaggcgat cgatctcttc
     9601 gatttttgcc gtcaccatca cgatcggaat gtcagaaaaa cgacgaattt cccggcacag
     9661 cgtcaggcca tcggtgccag ggagcatcag atctaacagg atcagatccg gtggtgtctg
     9721 gcgcacatac ggcagtacct gatcgccgtg gctgataagc gtcggcgcat agctcgcagc
     9781 acgcagataa tcaatgagca actgtcccag cttcggttca tcttccacga tcaaaatacg
     9841 cggtgtgttt tcgtcgattg gtaactcggt catacttctc tctgtaaatc ccgttccagc
     9901 ggtaactcta ctgtaatgct taccccgcca aaaggcgaat gggcagcaat aatgcggcca
     9961 ttatgtgctt caacaatgtt caggcaaatc gccagcccca gcccggaacc gccgctggcg
    10021 cggttgcggg aaccttcggt gcgataaaaa cgttcaaaca atttttgtag ctgatcgtca
    10081 ctgacacctg gcgcactgtc ggcaaaggtc aggcgcaccg ttttgtcgtg ctgctcggca
    10141 gagattttca ggctgccgcc gctgtcagtg tagcgcaggc tgttttccag taagttattg
    10201 aataactgca ttaaacggtc gcgatcgcca aatacggtga tactgtctgg cagggaaaat
    10261 tgcagtttca gtccacggct ggcaaatcgt tcgcgaaatg cgccgcccgc cacttccagc
    10321 agtgggatca aatctaccgg tgctttttga taggcgagag cgccttcatc agacatcgac
    10381 aactgatgaa gatcgtcaac cagtttggtc agtgtaccga cctccgcctg taaagacgcc
    10441 accgtctccg gcgtgaattt gcgcacgcca tcctgaatgg cttccagttc accgcgcagc
    10501 accgctaatg gcgtacgcag ttcgtgagaa atatcggcca taaaatcgcg ccgcatttgc
    10561 tggtttttct ccagcgtgct ggcgagctgg ttgaagtctt gcgccagttt gcccagttca
    10621 tcttcactgg tgggcgttac gcgggtagtg aaatcgcccg ccgccagttt gtgcgtgcca
    10681 tcgacaagtc gttttaccgg tgccagcaaa ccgcgcgcca gcagaaaagt agcgagtgcc
    10741 gcgagtaacg ttgccagagc gacaatcaac cagctggttt gccgctgttg tttatcgaaa
    10801 ttgatatcag tattgcgcgt taaccgctca acgggggagg cgatcaccgc gccaacttcc
    10861 gcaccgttga ccagaatggg tcgccgtgta ccgtcaggtg gaatcggcgc tcgcggacca
    10921 accagcactt tgttgttttg atcaaccacc cagaactggg tacgccagcc gtgcggtggc
    10981 atacccgggc cgggtttatc ttccgaatta tcgtgttcaa atgaacgcag gatctgaaag
    11041 acaaagcgat cattgttgcg caggaagcgc cagttgccat gctgtgcata ctgctcgcca
    11101 agcgcatcac ttaacagttg taatcgctgt tcattaccat gcttgatgta atcaataaag
    11161 ccacgctcaa aactgatacg caccgcccag tgcatactga tcagcaagac aatgcaggtg
    11221 gcgaaaatcg ccagaaacag tttgccggta ataccgggtc gccagaactt cattgcgcgc
    11281 tcctttttcg ccgcgaaata gctacatttt gatgcgtatc gttcggcact ctggcaaaaa
    11341 ggaacgccgg aagggcgatg atcaacgcca tgctaagcca ggtgtacata aagacggttt
    11401 gtgtggtgcc gctgtcgacg ctgacatgct gcgaaccaaa aagtcccagc aacagcccgg
    11461 cgatagtgac gccgatactc atcgacaatt gcataatcat cgacagcagg ctgtttccgc
    11521 tgctcgccag attgtccggg agatctttca gcgtcagggt gttcatggag gagaaacgcg
    11581 ttgagttgac cattccttgt aaaaacagga cgaacggcaa aacgtagtac cagcccaaca
    11641 gagcggtagt cataaacaac agggtgacca gcgacagacc cagcgtggtc gctaccagta
    11701 cccgacgata accaaagcga ttcaccacct gaaccacaat tcgcttcatt cccatgctgc
    11761 caagcaccat cgggatcatc atcagtccgg catgaaacgg cgagaaaccg aggccaattt
    11821 gcaggaaaac cggtgtcata aagggcaaca tgccactgcc aatacgtccg gcaaagctcc
    11881 ccgccaggcc cagcgaaaag gtacgagtgc ggaacagttt cagactgaac agggcgcggt
    11941 tgttatttct ggcgtgcagc agataaagca ccagtgccac cacgccaact gcgaccaggc
    12001 cagcaatcgc cagcggcgat aaacctgtac ctttactgcc gtccagcgcc agggttaata
    12061 ccgccatgcc aaccgccagc aataaaaagc cggaaagatc aaagcgccgc gtctgcatgg
    12121 tgtagttcgg cattaacatc agtgtggcga tcgcgccgat aattcccacc ggaatgttga
    12181 tcaaaaagat ccagtgccac gacgcgtact ccaccagcag gccgccgagc gccggaccga
    12241 gcagcggacc gacctgaccg ggtaacgtga caaaggtcat cgccgccata tattgctcgc
    12301 gcggtacgat tttcatcacc gtcaatctgc cgaccggcac catcatcgcg ccgccaacgc
    12361 cctgtaacgc gcgtgccagc aacagttcgt tcagcgtgcc ggaaagcgcg caaaacagtg
    12421 aaccgagagt aaacagcacg atggcggtaa agaaaatatt gcgcacgccg actttgtccg
    12481 ccagccagcc gctggcgggc agcatcaccg ccacggtcag cacataagag acaatgacca
    12541 tgtgcatatg caacggactt tccccgaggc tttgcgccat tgagggaagg gcggtgttta
    12601 cgatggtggt gtccagcgac tgcataaaga agccgaaagc cacaatccac aattgccaac
    12661 gggtgctgtc gggaagatct gtcatttact cggttaccgt ttgtttaggt ttacgcgaaa
    12721 aacgcagccg cagacggtcg aaaaagagat acaccaccgg cgtggtatac agcgtcagaa
    12781 gctggctcat taccagtccg ccgacaatgg tgatccccag gggttgctgc agcttcgagc
    12841 cgtcgccgcc cgacaatacc agcggcagcg caccaaacag cgccgccagg gtagtcatca
    12901 taatcgggcg aaaacgcagc agacaggcct ggaaaatagc ttcctgcggc gtcaggttac
    12961 cgtgccgttg ggcttcaagc gcaaaatcga ccatcatgat ggcgtttttc tttacgatgc
    13021 cgattaatag catgatccct atcagggcga ttaggctgaa cggggcattg aacaactcca
    13081 gcgccagcag cgctccaacg cccgtcgagg gcagggtgga gagaatcgtc agcggatgta
    13141 cgtaactctc gtaaaggata cccagcacga tatacactgt ggcgatggcg gcgataatca
    13201 ggatcacctg cgagttcatc gtctcctgga acacctgcgc cgtgccagca aaactaccgc
    13261 gcaccgtcga aggcacacca agctgggtca ttgcgcgatc gatcgccgca ctggcgtccg
    13321 agagcgattt tccggtcggc aggttgaacg agatggtcga ggccgccgat aatccctgat
    13381 gattcaccga cagcggagcg ttcgccggtt gccatttagc gaaatacgac agcgggatcg
    13441 ctttgccttc gttattgata acgaacattt tttccagcgc actgatgtcc tgggtatagc
    13501 gcggatccac ttccatcacc actttgtact ggttcatcgg ctggtaaatg gtcgagattt
    13561 gccgctgacc gaaggcgtta tttaacagac tgttggcggc ctgtacgtcg attcccagcc
    13621 gtgccatggt gtcgcggtcg taaaccagat tcatctccgc gccgttatcc tgctgatcgg
    13681 agttcacgtc cgccagttcc ggcaatgttg ccagtttttt gcggattttc ggctcccatt
    13741 cgcgcagtgc cgccaggtcg ttggataaca acgtgtactg gtaactggcg ttcgactgac
    13801 gtccgccaac gcgaatatcc tgtaccgcca tcaggaacag attcgccccc ggttctttcg
    13861 ccagcttcac ccgcagacgg tcgataattt gctgcgccgt ttcgctgcgt tcgtcgcgtg
    13921 gcttgagggt gataaacatc atcccgctgt tcactcgcga accgccggta aagccggtga
    13981 cattatccac tgccggatcg tcacggataa ttttcataaa atcctgcaac ttaccgcgca
    14041 tcgcctgaaa cgaaatactc tgatccgcct gaatcccgcc catcaacacg ccagtgtcct
    14101 gctccgggaa gaaggttttc gggatcgaga tatatagcca gatattcagc gcaatggtgc
    14161 caagcagcac cacgcccacc agacgggtat gattgagcac ccatttcagt gacttgccgt
    14221 agccttgttg cagggctacc aacatgcgac caaaaccacg tagtcgcttt tgctcgcgcg
    14281 gcttgctggc tttcagcatc cagccacaca tcatcggcgt tagcgtcagg gaaaccagca
    14341 acgaaatacc aatggcgaca gaaagcgtca cggcaaactc gcgtaacagt cggcccggca
    14401 atccgcccat caacagcagc ggcaggaaca ccgccaccag tgacagactc atcgacagca
    14461 ccgtaaaacc gacttcgcga gtaccttgca gtgcggcttg caacggtttc attcccgctt
    14521 ccagatgacg tgcaatgttt tccagcacca cgatggcgtc atccaccacg aaaccagtag
    14581 cgatggtgag cgccattaac gaaaggttat tgagactgaa tccgcacagg tacatcgccg
    14641 caaacgtacc aatcagcgaa accggcaccg caacggcggg aataatagtg gcgcgacccg
    14701 agcgcaggaa taaaaacacc accagaatca ccagcgccac cgagataatc agcgtttgct
    14761 cgacttcttc cagcgaggcg cgaatggtgg gggagcgatc ctgggcaatt tgcagatcaa
    14821 tcgccgccgg aatggtttcc tgcaactccg gtaattttgc ccggatgctg tcaaccgtct
    14881 ggataatatt ggcttccggc agtttgcgga tcatcagtaa aatagccggt ttggcgttgg
    14941 tcatcccggc gttgcgcaca tcctgcactg agtcggtcac cgtcgccaca tcgcccagac
    15001 gaaccgcgcc gccgttgttg tagtgaataa tcagcggctg atattcagcg gcggttttca
    15061 gttcatcgtt ggtctggatc tgccagcggt gagtgccatc ttccagcgcc ccctgcggtt
    15121 tacgcacgtt ggcattgctg atggcagtgc gtacgtcgtc cagcgacacg ccctgattaa
    15181 acagcgcctg cgggttcagc ccgacgcgca cggcgggcag cgagctgccg ccgacatcga
    15241 catcaccgac gccgtcgatt tgcgaaatcg tcggagccag ctgcgtcgag gcgaaatcgt
    15301 acaattcacc ctgcgaataa gtatcggagg ttagcgtcag gatcataatt ggcgcatccg
    15361 acgggttcgc tttgcgataa gtcgggcggc tgggcatccc actgggcagc agactttgtg
    15421 cggcgttgat cgccgcctgc acatcacgcg ccgcaccgtt gatatcccgg tcaaaatcaa
    15481 actgcaaaat aatacgcgtg ctgccgagcg aactgctgga ggtcatttca ctgaccccgg
    15541 caatgcgccc aagtgagcgc tccagcggcg tggcaacgga agacgccatt gtctccggcg
    15601 acgcaccggg cagcgaggcg ctgaccataa tcaccggaaa atcgacctgc ggcagcgggg
    15661 cgaccggcag catacggaaa cccagtatgc cgcacagggt aatggcgacc gacagtaaaa
    15721 tcgtctccac cgggcggtaa atgaagaggg caaaaaactt cacttacgcc tcctcttcat
    15781 ggcgagcaaa gcgacttttg gtccacaatg ccaggcggtc aaacagcaga taaatcaccg
    15841 gcgtggtgaa cagcgtcagc acctggctga caatcaggcc gccgaccatg ccgataccta
    15901 acggacgacg cagttccgcg ccgaccccgg tactcaacat cagcggcagc gcgccaagca
    15961 gagccgccag ggtggtcatc aggatcggac gaaaacgcaa cagacaagcc tggtagattg
    16021 catcgcgcgg cgacatgcct tgctcgcgct cagcagccag cgcgaagtcg atcatcatga
    16081 tggcgttctt cttcacgata ccgatcagca aaataatgcc gataatcgca atcacatcca
    16141 gttcgctacc ggcaatcatt aacgccagca gggcgccaac acctgccgtg ggtagcgtcg
    16201 agagaatggt gatcgggtga ataaagctct cgtacagaat gccgagcacg atatacatcg
    16261 ccaccaccgc cgcgacaatc agccagacag tgctgcccag cgccgactgg aaggcgaggg
    16321 tgctgccctg gaactgcgtg gtgatatcca ccggcagatt cagcgtcttt tcggtgtcca
    16381 taatcgtctg caccgcatcg cccagcgaat agttatctgg cacgttaaag gagatggtcg
    16441 ttaccgggaa ctgatccaga tggttgatgg aaagcggcgc aaaacgctgt tcaactttgg
    16501 caattgagct taacggcagc acgccgccgt cgctgctggt aaggcgaatg gtatccagcg
    16561 ccgcaagccc tggggtattt tcggtgttgt gctccagcac cacgcgatac tggttagcct
    16621 gagtataaat agtggaaatc agccgctgac caaacgcgtt gtacagggcg ttatcgacgt
    16681 ccgccatgct gatccccaga cggctggcgc tgtcgcgatc aacattgaca tacgccacca
    16741 gccctttgtc ctgccagtcg ctggagacat cagaaagctg tggcagttgc tggagttttt
    16801 ccatcaactg tggcacccag gtactgagcg catccagtga cgtggcctgc aaggtaaact
    16861 ggtactgggt gcggctgacc tgagtatcga tggtcaggtc ctgcgttggt tgcaggaaga
    16921 gatcgacgcc cggcacttta tccaccgccg tttgcagacg ggcgatgact ttttgcaccc
    16981 gatcatcacg ttcatccagc ggtttgaggt tgatctgcaa acgtgcactg ttcagcgacg
    17041 ggttagtgcc atcaacgcca acaaatgagg tcaggctttg cactgccgga tcctgcaaaa
    17101 tcacgtccgc gacctggcgt tgtcgctggg ccatattggc aaaggagctg gattgcggtg
    17161 cctgcaaagt gccctgaata atgccgttgt cctgtaccgg gaagaaacct ttcggaatga
    17221 acacccacaa tagaacgcta agcagcagcg tgctgagcgc cacgcttaag gtcagccacg
    17281 gatgattcag cactttcgcc agtccacgac cataggcggc gattatcctg tcgaacattt
    17341 tttccgaggc acgggagaag cggttctgtt tacgcaacga ctcctggctg agcatccttg
    17401 cgcacatcat cggtgtcagg gttagcgaca ccacggctga gattaaaatc gctaccgcca
    17461 gggtaatagc aaattcgcgg aacagtcgcc cgacgatatc gcccataaac agcagtggga
    17521 tcaacaccgc aatcagcgag aaggtcagcg agataatggt aaagccgatt tcacctgcgc
    17581 ctttgagcgc cgccgccaac ggtttttcgc ctttttcgat atagcgggaa atattttcga
    17641 tcaccacgat ggcgtcatcg accacgaacc cggtggcaat agttaacgcc atcagcgtca
    17701 ggttattgat tgaaaaatcg agaaacacca tgaccgcgaa ggtgccgatt aacgacagcg
    17761 gcactgcgac gccgggaatg atggtcgccg gaatattgcg caaaaacagg tagataatca
    17821 tgactaccag cgcgatagcc atcatcaatt caaactgagt atcatcgacg gatgcgcgga
    17881 tattggtggt acggtcagaa agtaccgtca ccttcaccga tttcggcaga ctctcggtga
    17941 gctgtggcag catctgccgg atgctgtcgg cggtggagat aatgttagca ccgggctggc
    18001 gctgaacatt catcacaatg gcctgttctt tgttcgccca cgcgccgagc cagctgtttt
    18061 ctgcaccttg ctctacggtt gcgacatcgc ccagacgaat cggcgcgccg ttctggtagg
    18121 cgataatcaa ctggcgatat tcttccgcag attgcatttg gtcattcgcg gaaagcgtaa
    18181 ccgcgcggga aggaccgtcg aggctacctt ttgccgagtt aacgttagcg ccggtaatgg
    18241 cggtgcgcac ggtttcgctg gtcaggccga gggcggcaat cgcctgagcg ttaagtttga
    18301 cgcgaacagc cggacgctgg ccgccggaaa gcgtcaccag gccgacgccg gaaatctgcg
    18361 agattttctg cgcgacgcgg gtttccacca tatcttccac ttgcgtcatc ggcatggcgg
    18421 ttgaggtgac ggcgagcgtc atgatcggcg gatctgccgg gttcactttg ctgtaaaccg
    18481 gcgggttagg cagatcgctc ggcaacaagt tggtcgcagc gttaatcgcg gcctgtactt
    18541 cctgctcggc gacatccagc ggtaatgtta gctggaactg caaagtgata actgacgcac
    18601 cgccggaact ttgcgacgac atctgtttca gaccagacat ctgcccgaac tggcgttcga
    18661 gcggcgcggt aacggcagag gtcatgacat ccgggctcgc acctgggtag agcgtgacca
    18721 cctgaatggt cggatagtcc acttccggca gcgccgaaac gggcagggcg cgataaccga
    18781 taatcccggc gagtaagatc gccaccatca gcagcgtggt ggcgacagga cgcataataa
    18841 acaggcgcga cgggccgcct gtgctgctcg ggggtaacac ctgcatcagg agcgagctcc
    18901 ttttttcgcg tattcgcggc tggtggcttt ctcttccgga gtggtggcgc tctgggcttc
    18961 caccacttcc actttcgccc cttcggtcag gcgatcaatg ccgtctgtca ctacgcgatc
    19021 gcccgcagaa atacctgcgc ggatcaccac tttctgactg tcctgaatgc ccggcgtcac
    19081 cagatgtttg ctgaccttgt tttcgctatt cagcacccag acaaaatggc cttcattgcc
    19141 catttgcagg gcggcggtgg ggatcactac ggcgttttgt tcggtgtcga ctaacatgcg
    19201 cgcgttaaca aactgattgg gaaacagcgc atcatcctga ttattaaagc gtgctttcac
    19261 tttaatcgta ccggtagtgg catcgatttg gttatcgaga cttaacagcg tgccttcact
    19321 taatttcttc gagttggtgc gatcccaggc ttctaccacc agcggttttc cggctttttg
    19381 cgcctgcaca acggtagcga tatcgctttc cggcagggta aagactaaat cgataggatg
    19441 cgtctgggtg atcaccacaa tcccggtggt atcaccactg gagatttggt taccgacatc
    19501 aacctgcttg agaccaacgc gaccatcgac tggtgcggtg atgcggctcc agtcgagttg
    19561 cagctgtgcg ctggcgacgc ttgcttcatc agccttaatg gtgccttcgg tttcactgac
    19621 cagcgcctgt tgggcatcca gttcctgacg agatacgaga ttggttttta ccagttgttg
    19681 ataacgcgcc aggtcacggc gggcgttggc aagcgtggct ttatcttttg ccagttggcc
    19741 ctgggcttgt gctaatgcaa ctttgaactg gctggggtca atttctgcca gtaaatcgcc
    19801 tgctttgacc tgctggcctt cctggaaatg taacgccatc agttgaccgt ccacgcggct
    19861 acgcaccgta acagtattag cagcgataat agtgccaagc ccggtgaggt aacgcggaac
    19921 tgcctgttct acggcggtcg ccgcctgaac cggggctaat gggccggaac gcataccacg
    19981 gcgaccaccc gctggcgatt gctgcgcttg tttcgtcgcc cctggggctg cactctggga
    20041 gtcattgcgg ccttgccaga accagaatgc ggcgatggcg gcgataacca ccacgattac
    20101 gattacccaa cgggatttat aactgccttt catcgttaag agtttctctt cctgaaacgt
    20161 ttcgcggaat gatactagtg tagccagcca ataagggaga aaaatggagg aattatgaaa
    20221 cactatcggg aatcgtctga atggcgggca catttgcgag cacgcatcca gtaataacac
    20281 aggaaactat tttatctacg cgtcagcgat agactgcttg catggcgaaa ggaggtaagc
    20341 cgacgatttc agcgggacgc tgaaacggga aagcccctcc cgaggaaggg gccataaata
    20401 aggaaagggt catgatgaag atactcatgc tcttagtgat tagctaccca gcatactaag
    20461 actaccgggg cgggggaaac cccgctctac cctcactcct gaaagtatgc cttcacgttc
    20521 agaatgtcaa tccgcaggct ttgcagtctg cgatcctgcc agcaaaaatt ctttgcgaga
    20581 cgttacgcaa taatcacact ggaaactatt ttatctgcaa gtcagcgata gactaagtgc
    20641 atggcgaaag gaggtaagcc gacgatttca gcgggacgct gaaatgggaa agcccctccc
    20701 gaggaagggg ccttaaataa ggaaagggtc atgatgaagc tactcatcat cgtggtgctc
    20761 ttagtcataa gcttccccgc ttactaagac taccagggcg ggggaaaccc cgctctaccc
    20821 tcactcctga aattatgtca ctccgccctt agtgtcaatc gacggctctc cgttcttgcg
    20881 aggcgaatag caaaattttc tgcgccgccg ggccgaattc tgaaagttgc tttgcctgct
    20941 cttatttcat tattgcagtc ggtatgatac cggacctcaa taattctcta agaaaggatt
    21001 tcttatgagc gaacaaatca cgtttgccac cagcgatttt gccagtaacc cggaaccacg
    21061 ttgcccctgc attctgctgc tggatgtttc tggctcgatg agtggcagac ctattaatga
    21121 acttaacgcc ggattggtta cctttcgcga tgagctgctt gccgattcgc tggctttaaa
    21181 aagagtggaa ctcggcattg tgacgttcgg cccggtgcat gtggaacaac cctttaccag
    21241 cgccgctaat ttttttccgc ccatcctgtt tgcccagggc gatacaccaa tgggtgcggc
    21301 cattaccaaa gccctggata tggtagagga gcggaaacgt gagtatcgtg caaatggtat
    21361 ttcgtattat cgcccgtgga ttttcctgat taccgatggt gcaccaaccg atgagtggca
    21421 ggctgcagcc aacaaagtgt ttcgggggga agaagataag aggtttgctt tcttttccat
    21481 cggtgttcag ggggcggata tgaagactct ggcacaaatc agcgttcgtc agcctttgcc
    21541 tctgcaagga ttacaattcc gtcaaggatt acaattc
//
LOCUS       DAJVTL010000068        21544 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.068, whole genome shotgun sequence.
ACCESSION   DAJVTL010000068 DAJVTL010000000
VERSION     DAJVTL010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21544
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.068"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..731)
                     /locus_tag="OQQ26_002478"
     CDS             complement(<1..731)
                     /locus_tag="OQQ26_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HCS1857905.1"
                     /translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK
                     NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEG
                     LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI
                     ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASC
                     ATVMRDGQVAGDVMLENTSTHHIVSL"
     gene            complement(754..1242)
                     /locus_tag="OQQ26_002479"
                     /pseudo
     CDS             complement(754..1242)
                     /locus_tag="OQQ26_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311441.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
     gene            complement(1229..1795)
                     /locus_tag="OQQ26_002480"
                     /pseudo
     CDS             complement(1229..1795)
                     /locus_tag="OQQ26_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001435050.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5107 domain-containing protein"
     gene            1913..3106
                     /locus_tag="OQQ26_002481"
     CDS             1913..3106
                     /locus_tag="OQQ26_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HCS1857906.1"
                     /translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV
                     SNILQELENEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL
                     SPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
                     MPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG
                     SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLK
                     SQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL
                     YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA
                     QLRQI"
     gene            complement(3304..4557)
                     /gene="glyA"
                     /locus_tag="OQQ26_002482"
     CDS             complement(3304..4557)
                     /gene="glyA"
                     /locus_tag="OQQ26_002482"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HCS1857907.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
                     QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
                     KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
                     INDEAVIERIKGKVLDICARYPVYA"
     gene            4885..6075
                     /gene="hmpA"
                     /locus_tag="OQQ26_002483"
     CDS             4885..6075
                     /gene="hmpA"
                     /locus_tag="OQQ26_002483"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HCS1857908.1"
                     /translation="MLDAQTIATVKATLPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
                     LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
                     TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
                     IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLA
                     MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
                     GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGLMQFTAKQLVDLGVKQENIHYECFGP
                     HKVL"
     gene            complement(6120..6458)
                     /gene="glnB"
                     /locus_tag="OQQ26_002484"
     CDS             complement(6120..6458)
                     /gene="glnB"
                     /locus_tag="OQQ26_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HCS1857909.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(6519..7853)
                     /gene="glrR"
                     /locus_tag="OQQ26_002485"
     CDS             complement(6519..7853)
                     /gene="glrR"
                     /locus_tag="OQQ26_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HCS1857910.1"
                     /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGVEGLRV
                     LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
                     FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
                     LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
                     NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT
                     HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
                     AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
                     EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(7843..8556)
                     /gene="qseG"
                     /locus_tag="OQQ26_002486"
     CDS             complement(7843..8556)
                     /gene="qseG"
                     /locus_tag="OQQ26_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HCS1857911.1"
                     /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
                     VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQ
                     NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER
                     QRYGKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
                     PHEGEKPAPSTHEVTPDEP"
     gene            complement(8721..10148)
                     /gene="qseE"
                     /locus_tag="OQQ26_002487"
     CDS             complement(8721..10148)
                     /gene="qseE"
                     /locus_tag="OQQ26_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417051.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HCS1857912.1"
                     /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA
                     GVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR
                     GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG
                     NSVSFSGPSELRSVGQRIIWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELDNVELAPLVETV
                     VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSL
                     HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG
                     ELYLVDESGQDVCFRIELPSSKNTK"
     gene            complement(10724..14611)
                     /gene="purL"
                     /locus_tag="OQQ26_002488"
                     /gene_synonym="purI"
     CDS             complement(10724..14611)
                     /gene="purL"
                     /locus_tag="OQQ26_002488"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HCS1857913.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
                     APLNDDEHAQLERLLKYGPALASHAPQGKLLLVAPRPGTISPWSSKATDIAHNCGLQQ
                     VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFALDDAEQLFAHHQPTPVTS
                     VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
                     HKIFNADWIIDGEQQPKSLFRMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY
                     EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
                     GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
                     SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
                     CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
                     ALVREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
                     TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
                     MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
                     SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
                     VRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGINADIASLGD
                     DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
                     VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
                     APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL
                     VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
                     LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
                     DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
                     RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
     gene            14869..16425
                     /gene="mltF"
                     /locus_tag="OQQ26_002489"
     CDS             14869..16425
                     /gene="mltF"
                     /locus_tag="OQQ26_002489"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HCS1857914.1"
                     /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE
                     LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVV
                     VNDLQPLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA
                     VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD
                     TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT
                     KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML
                     DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLF
                     SRKGSEEKQN"
     gene            complement(16422..16958)
                     /gene="tadA"
                     /locus_tag="OQQ26_002490"
     CDS             complement(16422..16958)
                     /gene="tadA"
                     /locus_tag="OQQ26_002490"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HCS1857915.1"
                     /translation="MRRAFITGVFFLSEVEFSHEYWMRHAMTLAKRAWDEREVPVGAV
                     LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
                     GAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
                     RMRRQEIKAQKKAQSSTD"
     gene            complement(16983..17618)
                     /gene="yfhb"
                     /locus_tag="OQQ26_002491"
     CDS             complement(16983..17618)
                     /gene="yfhb"
                     /locus_tag="OQQ26_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311453.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HCS1857916.1"
                     /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIAIALLIKGRAARWPMSLLLWGCTFGHNEARLQALQADFVRWFRDNVTAFPLVQE
                     RLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
     gene            17827..18675
                     /locus_tag="OQQ26_002492"
     CDS             17827..18675
                     /locus_tag="OQQ26_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417056.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCS1857917.1"
                     /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA
                     GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL
                     IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN
                     AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN
                     ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
                     LVKKLV"
     gene            complement(19454..20008)
                     /gene="pinE"
                     /locus_tag="OQQ26_002493"
                     /pseudo
     CDS             complement(19454..20008)
                     /gene="pinE"
                     /locus_tag="OQQ26_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015364430.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA recombinase"
     gene            20499..>21544
                     /locus_tag="OQQ26_002494"
     CDS             20499..>21544
                     /locus_tag="OQQ26_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HCS1857918.1"
                     /translation="MREINMLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQR
                     TEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKEL
                     IARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLK
                     KLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQEN
                     IIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQ
                     FRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVS
                     TQWTSFSTEENSRA"
BASE COUNT         5322 a         5703 c         5318 g         5201 t
ORIGIN      
        1 agcgacacaa tatgatgcgt ggaggtgttt tcgagcatca catcgcccgc cacctgacca
       61 tcgcgcataa cggtggcaca ggaggcaatg cggcgaattt cttccatccg gtggctgaca
      121 taaatcaccg ccacgcccag tgccgacatc tttttcaccg cgctgatcac cagttcaact
      181 tccgcactgg caagcgaact cgtaggttca tcaagaatga ccacgcgcgg ctcgcctttc
      241 atcacccgcg caatttccac cagttgcttt tgcgccgggc ttagcgttga aacaagttgt
      301 tcaggactaa cgtcaacgcc cagcgcctgt aagcaacgtt gggcatcctg cgccatttgc
      361 aggtaatcaa tcatgccgtt gcggcgaggc cactgaccta ggcagaggtt ttccgccacc
      421 gtcagccctt ccaccagact taactcctga taaaccgcgc gcacccccag ttcagcggca
      481 cggcgagtca gcgtagcttc gtcaccttcc agtcgcgtct cgccaatcca gatatcaccg
      541 ctatccggac gttcgctacc ggtaagcatt cgaatgaggg tcgatttgcc cgcgccgttt
      601 ttgcctaaca gcgcacgaac ctcgccttta ttgagcgtga agttaacgtt atccaacgca
      661 acgacgccgg gataacgctt atttcctgcc accacttttg ctaccgggac tgcctctgtt
      721 gccgtgaaca tagggacctc tgcgaatcag cgattagggc agaccatcaa cgtgcgttgc
      781 cagccactgt ttaccgtctt ccgttttggt atagagatcg ataggcacct gaatcacttt
      841 ttcaccgtcg gcttgtttat tgataacctt caatgtttgc gcgaaaacag cattgcccat
      901 tttcttgccg gaaatatcca ctaccgcttt cagcacctga ttgttttcca gctcctgagc
      961 aatttcagtg gtcatatccg aaccgaaaac agcaattttt ccggcctgat tttgattacg
     1021 taccgctttt actgcgccga gtgtcgctcc gcccgatacc cccataatgg cgttgagatc
     1081 cggcgtggag ataattagtt tttcaccaac ggaaatcgct ttatctaaaa cagtcccttc
     1141 ctgattagcg acaatttgcg cgccgggaac gcgggatttt aatacttctt caaatccttt
     1201 acgtcgctgc acacaaactt caaaggcttc acaattgatg acgcggcgtg gcgttgccgt
     1261 tatagacgcg gctggcgatt tccagtgccg cccggtcagg gcgcagggtg aaacctgtca
     1321 tcacctgtaa accatgcatc ggctccgttt cgccgaccca caccgtctgt gcaccgtctt
     1381 catgggcttc gagggtgaaa tcaacgggca taaaggtggt cggacgatgg tgttgcggcc
     1441 agttaaactc aatcccgccg gagatccacg gtcccagcag ccccaccagc gcaggtttaa
     1501 tgacttcatt gtgatcgaca aaatcgcgct gtttcacttt atcccatgcg cgatgcaccc
     1561 gaccgcccag ttccggcagg atcatcactt tgatgtagtc gttttccagc cacaccgcct
     1621 gccaggattt cagggttttc tgctcgctca gcgtatcggt cacgccgtag ggataaaccg
     1681 cgccggacga tccctaataa acgcgatttt ccaggaacat gggatgtata tcctgcggcc
     1741 cggtttcata ggtcgggatc tcaacgcgct cttgccatac ttttactgga gtcatggtgc
     1801 cctcaatatt aacaagacat actgaattaa aagatttgtg gcagtgtatt gaacaatctg
     1861 gcaatgtttt cgcggaataa tcacgcaatt aactaaacaa ggtttagtga agatgagagc
     1921 ctgcattaac aatcaacaga ttcgccacca taacaaatgc gtgattctgg aactgctgta
     1981 ccggcaaaag cgcgccaata aatcaacgct ggcccggctg gcgcaaattt cgattccggc
     2041 ggtcagtaat attttgcagg aactggaaaa cgaaaaacgg gtggtgaata tcgacgatga
     2101 aagtcagacg cgcgggcata gtagcggtac atggctgatt gcgccggaag gtgactggac
     2161 gctgtgcctg aacgtgacgc ccaccagtat tgagtgtcag gttgctaatg cttgtttaag
     2221 tccgaaaggc gagtttgagt atttacagat tgatgcaccg acgccgcagg cgctgctgtc
     2281 cgaaatcgaa aaatgctggc atcgccaccg taaattgtgg ccggaccgca ccatcaatct
     2341 ggcgctggca atccacggtc aggttgatcc agtgaccggc gtgtcgcaaa ccatgccgca
     2401 agcgccgtgg acaacgccgg tggaggtgaa atatctgctg gaagagaagc tgggcattcg
     2461 ggtgatggtc gataatgact gcgtgatgct ggcgctggcg gagaaatggc aaaataattc
     2521 gcaggaacgg gatttctgcg tgatcaacgt tgattacggc attggctcgt cgttcgtgat
     2581 taacgagcaa atttatcgcg gcagtttgta tggtagcgga cagattggtc acaccatcgt
     2641 taatccggat ggcgtcgtct gcgactgtgg acgttacggc tgcctggaaa ccgtcgcctc
     2701 gttaagtgca ttaaaaaaac aggcgcgggt atggctaaaa tcacaaccgg ttaatactca
     2761 gcttgatcct gaaaaactga caaccgcgca gttaatcgct gcctggcaga gtggagaacc
     2821 gtggatcacc agctgggttg atcgctctgc caatgccatt ggtttgagtc tgtataactt
     2881 cctcaacatc ctcaatatta atcagatttg gttgtacggt cgcagttgtg cctttggtga
     2941 gaactggctt aatactatta ttcgccagac aggatttaac ccgttcgacc gcgacgaagg
     3001 accgagcgtg aaagcgacgc aaattggctt cgggcaatta agccgcgcac aacaggtgct
     3061 gggaattggc tatttgtatg ttgaggcgca gttacgacag atttgatggc gcgataacgt
     3121 agaaaggctt cccgaaggaa gccttgatga tcataaacga aaaattgcct gatgcgctac
     3181 gcttatcagg cctacacgga gattgcaata tattgaattt gcaagatttt gtaggtctga
     3241 gaaggtgttc atgccgcatc caacatgaac aacgagcaca ttgtcagcaa atcaccgttt
     3301 cgcttatgcg taaaccgggt aacgtgcgca gatgtcgaga actttacctt tgatgcgctc
     3361 gataacggct tcatcattga tgctgtccag cacgtcacac atccagccag ccagttcttt
     3421 cgcttcggct tctttaaagc cgcgacgggt aatcgccgga gtacctacac gaataccgga
     3481 ggtcacaaac gggctcttcg gatcgttcgg tacgctgttt ttgttgacgg tgatgttagc
     3541 acggcccaga gcggcgtctg cttctttacc ggtcaggttt ttatcaacca gatcaaccag
     3601 gaacaggtgg ttatcagtgc cgccggaaac cactttgtag ccgcgttcca ggaacacttc
     3661 taccatcgct ttagcgtttt tagcgacctg ctgctggtaa gttttgaact caggctccat
     3721 cgcttctttc agagcaaccg ctttaccagc gattacgtgc atcaacggac cgccctgacc
     3781 accagggaaa acggcagagt tcagtttttt gtacagctct tcgctaccac ctttcgccag
     3841 gatcagaccg ccgcgcggac ccgccagggt tttgtgagtg gtggtagtaa caacgtgagc
     3901 atgaggaacc gggttcgggt agacgccagc agcaaccagg cccgcaacgt gcgccatatc
     3961 aacgaacaag taagcaccga tgctgtcagc gatttcacgc attttcgccc agtccaccac
     4021 gccggaatat gcagagaaac caccgataat cattttcggc ttgtgttctt tggcttgttt
     4081 ttccagatcg gcgtagtcga tatgaccggt agcatcgata ccgtaaggaa cgatgttgta
     4141 cagtttaccg gagaagttaa ccggagaacc gtgagtcagg tgaccgccat gcgccaggtt
     4201 catacccaga acggtatcac ctggttccag cagcgcggtg tagaccgcaa agttagcctg
     4261 ggagccggag tgcggctgga cgttagcgta gtcagcgccg aacagttctt tcgcacgatc
     4321 gatcgccagt tgttcaacga tatcaacata ctcgcaaccg ccgtagtagc gtttgcccgg
     4381 ataaccttca gcatatttgt tggtcagctg agaaccctgc gcctgcatta cgcgcgggct
     4441 ggtgtagttt tcggaggcga tcagttcgat gtgctcttcc tgacgtactt tttcctgctc
     4501 catagcctgc cacagttcgg catcataatc ggcaatgttc atttcacgct ttaacatccg
     4561 catctcctga ctcagcttac aataaaattt ttggccttta taggcggtcc tgttggacaa
     4621 cggcgaacag tataaccgaa tcattgtgcg ataacaggtc ttgacaaagg aatttacgca
     4681 aacgattacc ttcaggctac gcaaggcttt ggagaataaa gagcttgcaa ccggaaacgg
     4741 atttcttttc aggtttgtga tgcaaatttt tcacttcatc acattctttc tgaaaaacac
     4801 caaagaacca tttacattgc agggctattt tttataagat gcatttgaga tacatcaatt
     4861 aagatgcaaa aaaaggaaga ccatatgctt gacgctcaaa ccatcgctac agtaaaagcc
     4921 accctccctt tactggtgga aacggggcca aagttaaccg cccatttcta cgaccgtatg
     4981 tttactcata acccagaact caaagaaatt tttaacatga gtaaccagcg taatggcgat
     5041 caacgtgaag ccctgtttaa cgctattgcc gcctacgcca gtaatattga aaacctgcct
     5101 gcgctgctgc cagcggtaga aaaaatcgcg caaaagcaca ccagcttcca gatcaaaccg
     5161 gaacagtaca acatcgtcgg tgaacacctg ttggcaacgc tggacgaaat gttcagcccg
     5221 gggcaggaag tgctggacgc gtggggtaaa gcctatggtg tactggctaa tgtatttatc
     5281 aatcgcgagg cggaaatcta taacgaaaac gccagcaaag ccggtggttg ggaaggtact
     5341 cgcgatttcc gcattgtggc taaaacaccg cgcagcgcgc ttatcaccag cttcgaactg
     5401 gagccggtcg acggtggcgc agtggcagaa taccgtccgg ggcaatatct cggcgtctgg
     5461 ctgaagccgg aaggtttccc gcatcaggaa attcgtcagt actctttgac tcgcaaaccg
     5521 gatggcaaag gctatcgtat tgcggtgaaa cgcgaagagg gtgggcaggt atccaactgg
     5581 ttgcacaatc acgccaatgt tggcgatgtc gtgaaactgg tcgctccggc aggtgatttc
     5641 tttatggctg tcgcagatga cacaccagtg acgttaatct ctgccggtgt tggtcaaacg
     5701 ccaatgctgg caatgctcga cacgctggca aaagcaggcc acacagcaca agtgaactgg
     5761 ttccatgcgg cagaaaatgg cgatgttcac gcctttgccg atgaagttaa ggaactgggg
     5821 cagtcactgc cgcgctttac cgcgcacacc tggtatcgtc agccgagcga agccgatcgc
     5881 gctaaaggtc agtttgatag cgaaggtctg atggatttga gcaaactgga aggtgcgttc
     5941 agcgatccga caatgcagtt ctatctctgc ggcccggttg gcttaatgca gtttaccgcg
     6001 aaacagttag tggatctggg cgtgaagcag gaaaacattc attacgaatg ctttggcccg
     6061 cataaggtgc tgtaatttga tgttgccgga tggaaacatc cggcaaccct tgacgcggtt
     6121 taaattgccg cgtcgtcctc ttcaccggta cggatgcgaa tgacccgtgc cacgtcaaag
     6181 acgaagattt taccgtcacc gattttgccg gtttgcgccg tgcgaataat ggtatcgaca
     6241 caggtatcga caatgtcgtc cggtacgaca atctcaattt tcactttcgg cagaaaatcc
     6301 accatatact ccgcgccgcg gtacagctcg gtatggcctt tctggcgacc aaagcctttc
     6361 acttcggtca ccgtcatgcc ggtaataccg acttcggcca gtgcttcgcg gacatcgtcc
     6421 agcttgaagg gttttataat cgcatcaatc tttttcatgc tattccttga aaaggtcgcc
     6481 tgtcttttga tctgctaaac gtaacacata acgccaattc attccttgaa atcgtttgca
     6541 tccagctcgt gtcgggaaag cagtttataa aattctgtcc ggttgcgccc cgccattctc
     6601 gccgcgtggg tgacgttgcc tttggtgatt tgcagcagct tacgcaaata gttgagttca
     6661 aactgattac gtgcctcaac aaaggttggc agcgccgtat tttcaccctc cagcgcctgc
     6721 tctactaatg catcactaat caccggagat gaggtcagcg ccacgcactg ttcaatcacg
     6781 ttgaccaact ggcgcacatt acccggccag ctcgcggtca tcaggcgttt catcgcatcg
     6841 gtagagaacg cgcggacaaa cggtttatgt cgctctgccg cctggcgcaa caggtgattt
     6901 gccagtagcg gaatgtcttc tgtgcgctcc gccagtgccg gaattttcag gctgacaacg
     6961 ttgaggcggt aatagagatc ttcgcggaat tccccgcgcg ccatcgcttt tggcagatca
     7021 cggtgagtgg cagaaataat ccgcacattg atatcaatat cgcggttact gcccagcggg
     7081 cgcactttac gctcctgcaa cacgcgcaac agtttgacct gcaacggcgc aggcatatcg
     7141 ccaatctcat cgagaaatag cgttccgcct tccgccgcct ggaataaacc ttcgcgattg
     7201 ctgacagcgc cagtaaacgc gccacgcgca tgaccaaaca gctccgactc cagcaattgc
     7261 tcaggcaatg caccacagtt aatagcaata aatggtttgc tattgcgcgg gctggcgttg
     7321 tggatagcct gggcgaaaat ctctttcccg gtgccgctct gcccattaat cagcacgctg
     7381 acgtctgatt gcgccaccag ccgcgcctgt tccagcaaac gcagcatcag cgggctgcgg
     7441 gtgacaatcg cctcgcgcca gcgttcgtcg gtggctggcg cggattgttc cagcgcatcg
     7501 tcaattgcct gatatagcgc gtctttatcg acaggcttgg tgaggaaact aaaaacaccc
     7561 tgctgtgttg ctgcaacggc atcgggaata gaaccatgcg cggtaaggat aattaccggc
     7621 attcctggct gcactttctg aatttcagca aacagctgca taccatccat ttcatccatc
     7681 cgcaggtcgc tgatgactaa atctactttt tcgcgattca gtacccgtaa tccttcaacg
     7741 ccactctccg ccgtgaccac gctgtagcct tcgctggtca ggcgcaggcc aagcagtttc
     7801 agcaatcccg gatcgtcatc gaccaataat aaatgcgcag gtttatggct catcaggagt
     7861 gacctcatgg gtggatggcg cgggcttttc accctcgtgc ggcgtatccg gcgagaaatt
     7921 tccagccggt ttgcgggtcg agagctggcg ttcaatatca gtcaggtttt ccagcttgcg
     7981 ggtggtgagt tccagttgct gctgtagaac gtgatgttgc tggcgcaatg tatccagctc
     8041 gctgtcgctg gattgctgga gcttgccgta gcgttggcgc tcttccgcca gttgcagttg
     8101 cagcgcctga ccgtcgcgcc agagttgata cagagggcga acctgtgccg ggatctcggt
     8161 acttaacgct tcaatacgcg cgaccagctg gcggcgctca tatggcgtaa ttttggcgtc
     8221 ggcgagcaaa atcccttgtt taaaggtatt ttgccagctg ccgtcgtcat attggcgagc
     8281 ttgctgacgc gactgcgcag gcattaaacg atcagcacaa tccatcgccc gcagccagta
     8341 aagcggattg gtttcggttg atttaccttg cagcgcccag atgtcgctac attcagtaga
     8401 aagatagtca gccagttgat aaaccggaat tttttcttct gctggcgtat caatagctgg
     8461 cttattgtga ttctgcacgc aacccagcaa tgccagacat ggcagccctg ccagccacag
     8521 ccgtcggggc aataatcgtt gaaaaatgtg tcgcatattc accagactta aagcctatcc
     8581 cagtgggcgt aattgttgca gacagtttgg acatggacag cgcggagaaa ccggagcgta
     8641 catgtcgtac gtgaggattt cgagcactgc ccggggccga actgacaaat aaaatagcct
     8701 gatgggatag gctgttagca ttatttcgtg tttttcgacg acggtaattc aatgcggaaa
     8761 caaacgtctt gcccgctctc gtcgaccaga tacagttccc cttgcatacg gcgaatacaa
     8821 tccctggcaa tgcttaatcc cagaccgctg cccttcaccg ccccttttcg ctggtggctt
     8881 ccctgaaaaa agggttcgaa gatcatggcg cgttcctctt gcggaatggg cgtgcctgta
     8941 ttgatgacat caatataaac ccgcgcacca tgtaaactgc tgcgaaggca aatgttaccg
     9001 gattcagccc cgtagtgcac cgcattggag taaagattat ccagtacgct catcagcagc
     9061 attggctccg ccaggcaagc tgttgctttg agatcgacgt cggtatgcat cattttagcc
     9121 cgtgcgggca agctatgagc agaaactact gtctccacca gcggtgctaa ctcaacatta
     9181 tccagttcca ccgcactgtc cgcctgttta cggttgtaat caagcagttg ttcgatcagt
     9241 ttttgcaaat tgcggctact gctatcgagg atgctcacca cctctttttg ctctggcgta
     9301 agcggcccaa caacctggtc agccagtaat tcagtgccct cgcgcatact cgccagtggc
     9361 gtttttaatt catgagataa atgtcttaaa aattgatggc gttgggattc cagccatgac
     9421 aggcgctcac ttaaccaaat aatacgttgc ccaaccgagc gtaactcgct cggcccactg
     9481 aacgaaacgc tattgcccag agaacgccct tcccccaacc ggttgatcat cctctcgata
     9541 tttttcaccg gaccgataat catccgcgtg aaaagtagca ccatcaccag actcaccaga
     9601 aatagcacca gcgattgcca accaaaatat tgcccacgtt cggcgatttc acgctgaagt
     9661 tgctgcccac gagagaacac cactgtgcgc gtggcctgca ccatttcggt attggcactg
     9721 gcaaaggctt ccagacgcgc ggcggcggcg gcatcgggac cgctgttgtt acactgaagt
     9781 tgagccagat tgttcaagtc ctgacgcaat gcctggtaaa gtttatcgtc tggcagtacg
     9841 cctgcgtggg catcgagcat ttcgctgtaa cgcttgcgct ggctttgata aaccttcgca
     9901 agcgtagggt cgtccagcac gcaatactga cggtagctac gctccatctc cagtgccgcg
     9961 ttggtcatcg cttcactacg ccgggcatca ataagcgtag tgcggttaac cagcgccgcc
    10021 tgatcgctaa gcgcattcag gctttgccag gcttgccatg ccagcaccaa caggggtagc
    10081 agaattagca aaaatgccag cattaccagt tgtcgtaatg agcggggaaa aacgggccag
    10141 cgtttcaagg tgttactctc gtcagacgcg aatagcctga tgctaaccga ggggaagttc
    10201 agatacaaca aagccgggaa ttacccggct ttgttatgga ataaggcggt gcctaactcg
    10261 acgtttcgcc cgatggttga tatagctacg ctgatatcag aagttggacg gcaggcacct
    10321 tgttgtgcgt cattcgtatt ttatgtagca cgtcccgaag gggctgacat aagtcggtga
    10381 atgagccact ggttactatt atgcagtaac tgtgccaata aagaaaatag tttggtaacg
    10441 tactgattat acgttgcttt gaggggttta tggcttctcc gctgtttgaa tgtaaatcag
    10501 ccactgtgtc gctaaaaaga gacaacttaa gaaaaactta ttagatgaca ttaaaatcaa
    10561 tcagttaagt gtcaccaaaa agcgacacgg caaaccaccc attgtcgtga tttacagaca
    10621 caaaaaagct cccggagttg ggagcttatg atagtggttg gtgcttaatg ccggatgcgg
    10681 cgtaaatgcc gcatccgggc tgcaaaacca atgaactgat gacttacccc aactgcttac
    10741 gcgcattgcg gaaaatgcgc atccatgggc catcctcgcc ccagttttcc ggatgccagg
    10801 agttgctgac agtacggaaa acacgttccg ggtgcggcat cataatggtg actcgaccac
    10861 tttcagtcgt aaccgccgta ataccgttcg gtgaaccgtt cgggttagcc gggtaggttt
    10921 cagtgacttt gccgaagtta tcgacatagc gcagtgccac cagccctttg ctttccagtg
    10981 ccgccagatg cgccgcatca cgcacttcca cgcgcccttc accatgagag acagcaatcg
    11041 gcatttgcga gcccaccatc ccctgcaaca gcagagacgg gctttgggtt acttcaacca
    11101 ggctgaaacg cgcttcaaag cgatcggagg tattgcgcac aaaacgtggc cacaactcac
    11161 tacctgggat cagttcgcgc aggttagaca tcatctggca accgttacat acccccagcg
    11221 ccagcgtttg cggacggtgg aagaaggttg caaactcatc gcgtacacgg tcattgaaca
    11281 ggattgactt cgcccaacct tcaccggcac ccagcacatc accgtaggag aaaccaccgc
    11341 acgcgaccag ggcgtggaaa tcttccaggc ccgtgcgtcc ggtcagcagg tcactcatat
    11401 gcacgtcgat agcatcaaag cctgcacggt ggaaagctgc cgccatttca acatgcgagt
    11461 tcactccctg ctcacgcagc acagcaactt tcggacgtgc gccagtggca atatacggtg
    11521 ctgccacatc ttcgttgata tcgaacgaca gtttcacatt caggcccgga tcggcgtcgt
    11581 ttgatttcgc ctggtgctcc tggtcagcac actccgggtt gtcacgcagg cgctgcatct
    11641 gccaggtagt ttctgcccac cagacacgca acgtggtgcg gctttcgctg aatacagtct
    11701 gcccgttggc ggtaatcaca aaacggtcac cggaaaccgc ctgccctaca taatggacac
    11761 aatcagcaag cccatgctgt gccagtacgg actcgaccgc ttcacggtca gcggcacgaa
    11821 cctgaatcac cgcacccagt tcttcgttaa acaacgccgc caggcgatcg tcgcccagag
    11881 aggcaatatc cgcgttaatg ccgcaatgac cagcaaaggc catttccgcc agcgttacca
    11941 gcaggccgcc atcagagcgg tcgtggtatg cgagcagctt acgctgtgca accagcgcct
    12001 gaatcgcgtc atagaagcct ttcagttgcg cgacgtcgcg tacatctgcc ggtttgtcgc
    12061 caagctgacg ataaacctgc gccagcgccg ttgcgcccag cgcgttattg cctttgccca
    12121 aatcaatcag cagcagtgcg ttatcttcgg tagaaagctg tggcgtgatg gtgtgacgca
    12181 catcttccac gcgggcaaat gcagaaatca ccagcgacag cggcgacgtc atttcgcgct
    12241 cttcgttacc ttcctgccag cgggttttca tcgacataga gtctttaccc accgggatcg
    12301 tcaggcccag cgccggacaa agctcttcgc ccacggcttt aacggcttca tacaggcccg
    12361 catcttcacc agggtggcct gccgccgcca tccagttggc ggaaagttta atgcgtttga
    12421 tatcgccaat ctgtgttgcg gcaatattgg ttaacgcttc accgaccgcc agacgggcag
    12481 aggcggcgaa atccagcagc gcaaccggcg cacgctcgcc aatcgccatc gcttcaccgt
    12541 agtagctgtc gaggctggcg gtagtgaccg cgcagttagc gaccggcacc tgccacggcc
    12601 ccaccatctg atcgcgcgct accatgccag ttacgctgcg gtcaccgatg gtcaccagga
    12661 aagttttctc cgccacggtc ggcagatgca gtacgcgttt caccgcgtct gcaatggtga
    12721 tcccttcacg gaccagcgca tcgcccttcg ctttcagcgt ttgtacatca cgggtcatct
    12781 tcggcgtttt accaagcagg acgtccagcg gcagatcgat cggctgatta tcaaaatgac
    12841 gatcgtgcag agaaagatgc agttcttcgg tcgcttcacc aatcaccgcg tagggtgcgc
    12901 gctcacgctt acacagttcg tcaaacagcg gtaattgatc ggcagcaacc gccagcacgt
    12961 agcgttcctg ggattcgtta caccagattt ccagcgggct catgcccggt tcgtcgctta
    13021 gaatatcgcg cagttcaaat ttaccgccgc gtccgccgtc gctcaccagc tccggcatcg
    13081 cgttagaaag accgcccgca ccgacgtcgt ggataaacag aattgggtta gcatcaccaa
    13141 gctgccagca acggtcgatc acttcctggc aacgacgctc catctccggg ttgtcgcgct
    13201 gtacggaagc aaagtcgagg tcggcatcag actgaccaga cgccatggaa gacgccgcgc
    13261 cgccgccaag accgatgttc attgccgggc cgccgagaac gaccagcttc gcaccgacgt
    13321 tgatctcgcc tttttgtacg tgatcggcgc gaatgttgcc gatcccgccc gccagcatga
    13381 tcggtttgtg ataaccgcgc agctcttcgc cattgtggct gttcactttt tcttcataag
    13441 tacggaagta gccgttcagt gccggacgac caaattcgtt gttaaacgcc gcaccgccca
    13501 gcgggccttc ggtcatgatg tccagcgcgg taacaatgcg ctcaggctta ccgaaatctt
    13561 cttcccacgg ctgttcgaag ccaggaattc gcaggttgga tacggagaaa ccaaccaaac
    13621 cagctttcgg cttcgcgccg cgcccggtgg caccttcatc gcggatttca ccgccggaac
    13681 cggtcgccgc gcccggccac ggagaaatcg ccgtcgggtg gttgtgagtt tcgactttca
    13741 tcaggatgtg cgccggttcc tgatggaaat cgtagcggcc cgtttcgtgg tcagcaaagt
    13801 agcggcccac ttcagaacct tccattacgg cggcgttatc tttataagca gagagaacgt
    13861 gatctggcgt ggtttcgaaa gtatttttga tcatcctgaa cagcgatttc ggctgttgtt
    13921 caccgtcgat aatccagtcg gcgttaaaaa ttttgtggcg gcagtgctca gagttcgcct
    13981 gagcgaacat atacagctcg atgtcgttcg ggttacgacc aagctttgtg aaagcatcct
    14041 gcagatagtc aatttcatct tccgccagag ccaggccaag acgcaggtta gcgtcgatca
    14101 gcgcctgacg gccctgcccc agcaaatcaa cgctggtaac cggagtcggt tgatggtggg
    14161 caaacaactg ctctgcatca tctaaagcaa aaaagaccgt ttccatcatg cggtcgtgca
    14221 gttcagcggt aacctgctgc cattgttcat tggtcagcgt accggcttct atatagtaag
    14281 caacgccgcg ctcaaggcgg tttacctgtt gtagcccgca gttatgggca atatcggtcg
    14341 ctttcgaaga ccagggagag atggtgccag gacgcggggc caccagcagg agtttgcctt
    14401 gcggggcgtg gctggcgagt gccgggccat atttcagcag gcgttcaagt tgtgcgtgct
    14461 catcatcgtt taacggcgca ttgaggtcag caaaatggac atactcggcg taaatattgt
    14521 gaaccgggag cctggcagcc tgaaaacgtg ccagcagttt gttgattcgg aatgccgaca
    14581 atgcaggcga accacgcaga atttccatca taagtctctc gtcttctaag ctttcggtgt
    14641 acccaagggg gggaaacggg cgtcattata aagaatctga tgcgctgacg aaaccgtttg
    14701 cgtggaaata aaatcaccat cgtgaattag caacgcgtgc cgccaatggc tgtaataagt
    14761 tgccatctgg cgcaggttta cgcaaaatgc cgctcattta tgagtaaacc tttcactatt
    14821 attacgtttt ttcaagctgg gacgcgcacg acacagagaa ttaactaatt gaaaaaatta
    14881 aagattaatt atctgttcat cggcattctg gcactgctgc tcgcggtcgc tctctggcca
    14941 tccattccct ggtttggtaa agccgacaac cgtatcgccg ccattcaagc gcggggagag
    15001 ttgcgtgtga gcaccattca tactcccctg acgtataacg aaatcaacgg gaaacctttt
    15061 ggcctggatt acgaactggc gaaacagttt gccgattacc tcggcgtcaa actgaaagtg
    15121 accgtgcggc agaatatcag ccagctgttt gacgacctcg ataatggtaa cgccgacctg
    15181 ctggcggcag gactggtcta taacagtgag cgggtaaaaa attatcagcc tggccctacc
    15241 tattattccg tgtcacaaca actggtttat aaagtgggtc agtatcgccc acgtacgctg
    15301 ggcaatctga cggcggagca actcaccgtt gcaccgggtc atgtggtggt taacgatctc
    15361 cagcccctga aagaaacaaa atttccggaa ttaagctgga aggtagacga caaaaaaggc
    15421 tctgcggaat taatggaaga tgtcatcgaa ggaaaactcg attacaccat tgcagattct
    15481 gtcgccatca gcctgtttca gcgcgttcac ccggaactcg ccgtagcgct cgatatcacc
    15541 gatgaacaac cggtgacctg gtttagcccg ttagatggcg ataataccct ttccgccgcc
    15601 ctgctcgact tcttcaacga aatgaatgaa gacggtacgc tggcacgcat tgaagagaaa
    15661 tacctggggc atggcgatga ttttgattac gtcgatacgc gcacattttt acgcgccgtc
    15721 gatgcggtac tgccgcagtt aaagcccctg tttgagaaat acgccgaaga aattgactgg
    15781 cgtttgctgg ccgctattgc ttatcaggaa tcgcactggg atgcacaggc cacttcaccg
    15841 acgggtgtgc gcggcatgat gatgttaacc aaaaataccg cgcaaagcct cggcattacg
    15901 gatcgtaccg atgccgaaca gagcatcagc ggcggcgtgc gttatttgca ggatatgatg
    15961 agtaaagtgc cggaaagtgt gccggagaac gaacggatct ggtttgccct cgccgcgtac
    16021 aatatgggct atgcacatat gctggatgcc cgcgctctga cggcaaaaac taaaggtaat
    16081 cctgacagtt gggcggacgt aaaacagcgt ctgcctttac ttagccagaa accctattac
    16141 agcaagctga cttacggcta cgctcgtggg catgaagcct acgcttatgt cgaaaatatt
    16201 cgtaagtatc agattagcct ggtgggttat ctgcaagaga aagagaagca ggctacagaa
    16261 gcggcgatgc aactggcgca ggattatccg gcggtatcgc ctacggagtt gggcaaagag
    16321 aaatttcctt ttctctcgtt tctttcccag tcgtcatcaa actatttgac ccattctccc
    16381 tctctgctgt tttccaggaa agggagtgaa gagaaacaaa attaatccgt cgaggattgc
    16441 gcttttttct gcgctttaat ttcctggcgg cgcatgcgaa agaagtcact gagcaacgcc
    16501 gcgcactcat ccgccagtat tccttccgta atttccactc ggtgattcat acccggatga
    16561 tgcagcacat ccattaaaga tcccgcagcg ccagttttcg catcacgcgc accaaagacc
    16621 acgcgaccaa tgcgactgtg gatcatcgct ccggcacaca ttacacatgg ttcaagcgtg
    16681 acatacaacg tggcgtcgat cagacgataa ttttgcatca ccagaccgcc ctgcctcagg
    16741 gccatgattt ctgcatgtgc ggtgggatca tgtcgaccaa tcggacggtt ccagccttcg
    16801 ccaataacac gattgttatg cactaatacc gcgccgaccg gtacttcccg ctcatcccag
    16861 gcacgcttcg ccagcgtcat tgcatgacgc atccagtatt cgtggctaaa ttcgacttca
    16921 gacaaaaaga aaactccggt tataaaagcg cggcgcatta tacacggacg ctatgcttta
    16981 ctctattcca gttgctggag ttcaccgcgc ggggttactc gccagcgatg ctgacagaaa
    17041 taaagcagcg gattgtcctg attactgtcg ctatagccac tgtacagccg cagcggcgtg
    17101 ccgattttgc gctccagttg tgcgaccttt tcatgtccca gacaacgcat cgtcaatacc
    17161 caaccaccat agccacgctg aatttggctg gcgataagat taacccgcgg cagccaaggc
    17221 gtatcgaaat aaaccgcttc aaccagcggc tggggagagc cggtaatcaa ccagatatca
    17281 gcatcggaac ttaacaggta ggtggttaat cgctcctgaa ccagcggaaa ggcggtaaca
    17341 ttgtcacgaa accagcgtac gaaatcggcc tgcaacgcct gcaaacgcgc ttcattgtga
    17401 ccaaaagtgc atccccacag aagcagactc atcggccagc gtgccgcacg accttttatc
    17461 aataacgcaa tggctataat cggcaacaac ggcaggacaa gtaacgcatt cagcggttgg
    17521 cgacgcagta aatagcgcag aaaactgccg aacatatcct gctgatgcaa tgttccatct
    17581 aagtcaaaaa acaccacacg acgctcgtga gttgccaaac catactcctc tggactgaaa
    17641 catcctgatt aattttcgct actacatagc ctaacagata gatcatcact tttccggcaa
    17701 caatcgaccg catcatggct aactggaatt tttaattcat ggcaattagc ggcaatggaa
    17761 tataaaattc actcgcgtgt gtctcatatt gcctgttgtc gccactattt catcgcgagg
    17821 aaagatatga acggcttact tcgtatccgt cagcgttacc aagggcttgc ccagagtgat
    17881 aaaaaactgg cggattatct gctgctacaa cctgatacgg cgcgccattt aagctctcag
    17941 caactggcca acgaagccgg agtcagtcag tccagcgtcg tgaagttcgc gcaaaaactc
    18001 ggctataaag gttttccggc gcttaagttg gcgttgagtg aagcgctggc aagccagccg
    18061 gaatcgccct ccgtgcccat tcataaccaa atccgcggtg atgatccgtt acggctggtc
    18121 ggcgaaaaac tgattaaaga aaatactgcc gctatgtacg caacgctaaa cgttaatagt
    18181 gaagagaaac tgcatgaatg cgtaacaatg ttgcgctctg cgcggcggat aattctgacc
    18241 ggtattggcg cttcgggtct ggtggcgcaa aactttgcct ggaagctgat gaagattggc
    18301 ttcaatgctg ccgcagtgcg cgatatgcat gcgctactcg ctaccgtaca ggcgtcgtcc
    18361 cctgacgatc tgttattagc catttcttac accggtgtac gacgcgagtt aaacctggcg
    18421 gcagatgaga tgctgcgagt gggcggaaaa gtgctggcga ttaccggctt tactcccaat
    18481 gccctgcaac agcgtgcttc tcattgcctg tataccattg ccgaagaaca agcgacaaac
    18541 agtgcttcaa tctctgcttg tcacgcgcag ggaatgttaa cggatttgct gttcattgcg
    18601 ctgattcagc aggatctgga actggcacca gaacgtattc gtcatagtga agcgctggtg
    18661 aaaaaactgg tctgagtaaa gaatgcgcgt ataatgcccg cccggtttgt gttgttttga
    18721 gagtttcctt atggcgctgt taatcactaa aaaatgcatc aattgtgata tgtgtgaaat
    18781 caaataaaaa cacatttatt ttcatagtga tacagcaatg tgttattgaa tatgttgttg
    18841 gatttatggt gcaaaaaaaa ttttgcataa gttcagcaac acaaagaaca ccactttctt
    18901 taacgtcctc cgcgccctaa aggacggggc tttacggcgc attggataat tatttacact
    18961 cgatgttgtt aaaagcatta tactcatgtt taaaattacc tgattggtaa agtcgattgg
    19021 ttgaggttca tatgagcaga agatatgtca aggagctggc tatagagtct ggcacccctt
    19081 tgggtatcgt tcctagctcc aactatgcca aggctttaaa ccgtgactct gtcgtcaaag
    19141 tgatatcaaa agacatgaat atggtcggaa acgatcccag gcggtcagaa agccgtgttt
    19201 atgctgaata catagtaaag tgcactgttc gttttgttgt ctctggtggc ttcaactcag
    19261 gcctctgctg gtcgttgtca gcacgacagc gatactgccg ctgacggctc ccgctgcggt
    19321 gggcgctctg cggattcccg ccctggaggc ggtggcattc gttaaaaaca aggccgcaaa
    19381 aaaggcctgt gacataccac attaactttt cagtcaaccg tagcacgttc ttgtatacgc
    19441 cgtgtctgcg gttttatata accctggctg gaaacctctt atacaaagtc gattcgccaa
    19501 catcatagat gatcgccacc ttctggcgag aaactcctga tgcaattagt cgcccggcct
    19561 gcgcccatta ttctggtgaa agtttgggac ggcgaccgcc aattcgtccc tgtgcgcgag
    19621 cagcttccag tcctgctttt gttcgttcaa caatcagttc acgttccatt tcagccaggg
    19681 cacccatcac atggaagaaa aagcgtccca ttggtgtgct ggtatcaatt gaatcagtca
    19741 gactacgaaa gttgatgcct cgttcgcgca actcctccac cagtacgaca agatgccgca
    19801 tactgcgccc cagccgatcc agcttccaga caaccagtgt gtcgcctgcc gataatgtcc
    19861 tgagcagttt tttcagcccc ggcctttcgg actttgtgcc acttatcttg tcttcaaaaa
    19921 tcagctcgca tcctgcacag ttcaacgcat tacgttgtag atcggtattc tggtcatttg
    19981 ttgatacgcg tacatagcca ataagcatgg taaatccccc tgttaacaag acactgcgtc
    20041 aaaagtcggg ggggagaatt gggtgatctc cttccatggg aatacacagg cattataaaa
    20101 tagaatgtac tgttttttta aagaaaaaaa cagtacattg agatatgatt tggatcatta
    20161 ctaaatcctt tgctgaagtt actatgtata taagcttatt ttatacatga ttattagcaa
    20221 caaatattac caagtcaagt agtcaggctg gctaaaatag ttggagatgt tgtagtatct
    20281 tactcaagac taatgtcttc tggtataaat cctccgcatt gtgaatatgt aaaacatcaa
    20341 aaaaagatga accaaatata cgaaaaaagc aaatatactt accagggtag aaagcatgat
    20401 ataacactca ttcccttatg gcgaatattc tgaaacaccc tcctcattag gagagataca
    20461 ttaaatacaa tttattcaca atctaattcc atatccatat gcgagaaatt aatatgctca
    20521 gaaatatttc atcctgttta tttccacata tcagcacaat tacatccccc aaccattatt
    20581 tgtccgaatg ggatgattgg gagaaacagg ggttaccgga agaacagcgt actgaggcgg
    20641 taagaagact tcgtgcatgt cttacctcta aggggcataa actggacctg cgagccttgg
    20701 cgctttcctc gttacctgta ctccctgctt gcattaaaaa gcttgatgtg agctgtaata
    20761 aattaaccat ccttactgat ttacctgaaa atattaaaga acttattgca agagataatt
    20821 tcttaacaca tatatctgca ttaccacatt atctaataac tttggatgta tccgaaaatc
    20881 aattagagaa tctgccgtta ttaccagaca ccatcaaatc actaagcgca gagtataata
    20941 ggttatccac actgccttca ttacccttga atttaaaaaa acttgaggtt aggaacaacg
    21001 aactgcaaac tcttccatct ctgccttcta atcttaagat acttaaggtt gcgcacaacc
    21061 atcttactga actgccccct ttacctagga gactgcaact tctttttgca tatagcaata
    21121 gattaagcaa cttaccaaac atccaagaaa atattatcat gagaagattt ttttattttg
    21181 aaaacaacca aataactaca atcccgacaa atctttttcg tttagatcct catataacta
    21241 ttgagattgc aaataacccc ttatcagatc aaactctgct attcttaata cagcaaactt
    21301 cggttccaaa ttttaacggg cctcagtttc gtatttccct gtcagaccaa aacagactgt
    21361 ttttacgcca gatgttgccg caaaatttac attcgcgcca tatcagagtc atcactgaag
    21421 gggggcagaa ctttcagatc ccccctcttc ccgaaactgt ggcagcctgg tttcctgaag
    21481 cagatcgtcg ggaggtttct acacaatgga cttctttttc caccgaggag aattcccggg
    21541 catt
//
LOCUS       DAJVTL010000069        21505 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.069, whole genome shotgun sequence.
ACCESSION   DAJVTL010000069 DAJVTL010000000
VERSION     DAJVTL010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21505
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.069"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            126..1811
                     /locus_tag="OQQ26_002495"
     CDS             126..1811
                     /locus_tag="OQQ26_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HCS1857919.1"
                     /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
                     GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
                     VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
     gene            complement(1986..2522)
                     /gene="rcdA"
                     /locus_tag="OQQ26_002496"
     CDS             complement(1986..2522)
                     /gene="rcdA"
                     /locus_tag="OQQ26_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator RcdA"
                     /protein_id="HCS1857920.1"
                     /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
                     MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
                     MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
                     RKPLSREEILRMVERVAG"
     gene            2606..3814
                     /locus_tag="OQQ26_002497"
     CDS             2606..3814
                     /locus_tag="OQQ26_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857921.1"
                     /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALVGMMILSLALWLTS
                     PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
                     LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
                     DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
                     TKTQTAMENS"
     gene            3814..4629
                     /gene="ybjI"
                     /locus_tag="OQQ26_002498"
     CDS             3814..4629
                     /gene="ybjI"
                     /locus_tag="OQQ26_002498"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase"
                     /protein_id="HCS1857922.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRERFLAQYQQMKAQDIRFVVAS
                     GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEV
                     EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
                     VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDNEVVVFGDGGN
                     DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ"
     gene            4715..4999
                     /locus_tag="OQQ26_002499"
     CDS             4715..4999
                     /locus_tag="OQQ26_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857923.1"
                     /translation="MFMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
                     PQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH"
     gene            complement(5039..6265)
                     /gene="mdfA"
                     /locus_tag="OQQ26_002500"
     CDS             complement(5039..6265)
                     /gene="mdfA"
                     /locus_tag="OQQ26_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdfA"
                     /protein_id="HCS1857924.1"
                     /translation="MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVV
                     EQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLA
                     QNIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLV
                     GAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKN
                     GRFVAGALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARL
                     TSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVR
                     LTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSL
                     MVIFLKDKQMGNSHEG"
     gene            6550..7146
                     /gene="ybjG"
                     /locus_tag="OQQ26_002501"
     CDS             6550..7146
                     /gene="ybjG"
                     /locus_tag="OQQ26_002501"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706720.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HCS1857925.1"
                     /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAV
                     LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
                     SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
                     CLSAQIIWQAIGHKLYQRLQSWYRVCFALPIRKGWVRD"
     gene            7204..7962
                     /gene="deoR"
                     /locus_tag="OQQ26_002502"
     CDS             7204..7962
                     /gene="deoR"
                     /locus_tag="OQQ26_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HCS1857926.1"
                     /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
                     HSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
                     TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
                     LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
                     RMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKLMY"
     gene            complement(8009..9211)
                     /gene="dacC"
                     /locus_tag="OQQ26_002503"
     CDS             complement(8009..9211)
                     /gene="dacC"
                     /locus_tag="OQQ26_002503"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HCS1857927.1"
                     /translation="MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWIL
                     MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDARATGN
                     PALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAK
                     KLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQP
                     NRNRLLWSSNLNVDGIKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK
                     LLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASY
                     TLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFH
                     QWFGNWFS"
     gene            9449..10075
                     /gene="gstB"
                     /locus_tag="OQQ26_002504"
     CDS             9449..10075
                     /gene="gstB"
                     /locus_tag="OQQ26_002504"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308945.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase GstB"
                     /protein_id="HCS1857928.1"
                     /translation="MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADF
                     LAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWA
                     NQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFG
                     VGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS"
     gene            complement(10072..11187)
                     /gene="yliI"
                     /locus_tag="OQQ26_002505"
     CDS             complement(10072..11187)
                     /gene="yliI"
                     /locus_tag="OQQ26_002505"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose sugar dehydrogenase YliI"
                     /protein_id="HCS1857929.1"
                     /translation="MHRQFFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLP
                     DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIRL
                     SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYL
                     FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGSRAEIWSYGIRNPQG
                     MAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAG
                     TEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI
                     LTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSPRN"
     gene            complement(11298..11681)
                     /gene="bssR"
                     /locus_tag="OQQ26_002506"
     CDS             complement(11298..11681)
                     /gene="bssR"
                     /locus_tag="OQQ26_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HCS1857930.1"
                     /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
                     NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
                     KLENCLMSLTLSIQSLQKHAMLEKA"
     gene            11894..13219
                     /gene="rimO"
                     /locus_tag="OQQ26_002507"
     CDS             11894..13219
                     /gene="rimO"
                     /locus_tag="OQQ26_002507"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HCS1857931.1"
                     /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
                     MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGADTNALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
     gene            complement(13266..14594)
                     /locus_tag="OQQ26_002508"
     CDS             complement(13266..14594)
                     /locus_tag="OQQ26_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1857932.1"
                     /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
                     TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
                     ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
                     RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
                     AYKKDVYLRVCTLIIFFAALVAVISGTSCLYLVRRVINRGIMEKEAIINNHFERVLDG
                     GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNI
                     NDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEI
                     VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
     gene            complement(14602..16950)
                     /locus_tag="OQQ26_002509"
     CDS             complement(14602..16950)
                     /locus_tag="OQQ26_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1857933.1"
                     /translation="MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRAD
                     SRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVL
                     DDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNNW
                     NPAYNCFDRPGKKCISFTLRINGKDHDLLAVDKIHVDLNWRYLNEYLDQISVNDEVLF
                     LKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIAKTSAVPNNALFEIYFYYPG
                     GNLLNASDKLFYLPFAFIIIVLLVVYFMTTRVFRRQFSEMTELVNTLAFLPDSTDQIE
                     ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ
                     YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR
                     ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH
                     MFSEFIFCDDAKLNEIEENIWIARNIRNAMEIGELFLVYQPIVDINTRAILGAEALCR
                     WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV
                     SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI
                     SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAE
                     GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE"
     gene            complement(17128..18039)
                     /gene="gsiD"
                     /locus_tag="OQQ26_002510"
     CDS             complement(17128..18039)
                     /gene="gsiD"
                     /locus_tag="OQQ26_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HCS1857934.1"
                     /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
                     LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
                     LAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(18042..18962)
                     /gene="gsiC"
                     /locus_tag="OQQ26_002511"
                     /pseudo
     CDS             complement(18042..18962)
                     /gene="gsiC"
                     /locus_tag="OQQ26_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415352.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
     gene            complement(18980..20518)
                     /gene="gsiB"
                     /locus_tag="OQQ26_002512"
                     /pseudo
     CDS             complement(18980..20518)
                     /gene="gsiB"
                     /locus_tag="OQQ26_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706707.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
     gene            complement(20538..>21505)
                     /locus_tag="OQQ26_002513"
     CDS             complement(20538..>21505)
                     /locus_tag="OQQ26_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCS1857935.1"
                     /translation="EQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFD
                     LWPGETLSLVGESGSGKSTTGRELLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQ
                     FIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPH
                     EFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFI
                     SHDMAVVERISHRVAVMYLGQIVEIGPRCAVFENPQHPYTRKLLAAVLVAEPSRQRPQ
                     RVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
BASE COUNT         5437 a         5530 c         5103 g         5435 t
ORIGIN      
        1 tatattgtta ctttactatc gtttaggtgc gctgaatgaa tctgcgccct gaattctggt
       61 aaaaaacatt atcgtaaatt accatttctt tcaacagctt actagtaaac aagaagttag
      121 cctccgtgaa tataaacgtc gccgaattgt taaatgggaa ttacattctg ttattatttg
      181 tggtcctcgc gcttgggcta tgtctcggaa agttacgact tggttcgatc caactgggta
      241 attccattgg cgttttggtc gtatcactgt tattaggcca acaacatttc agcattaaca
      301 ccgacgcgct taatcttggc tttatgctgt ttattttctg cgtcggggtc gaagccggac
      361 cgaacttttt ttccattttt tttcgcgatg ggaaaaatta cctaatgtta gcactggtga
      421 tggttggcag cgcgctggtg atcgccttag ggttaggtaa gctgtttggc tgggatattg
      481 gcctgacggc cggtatgtta gcaggctcta tgacgtcgac accggttctg gtcggtgctg
      541 gcgatacact gcgtcattcc ggtatggaaa gcaggcagct ctcactggca ctggataatc
      601 tgagcctcgg gtatgcctta acctatttaa tcggtctggt gagtttgatt gttggtgcgc
      661 gttacttgcc gaaattgcag catcaggact tacagaccag cgcccagcaa atcgcccgcg
      721 aacgtggcct ggacactgat gccaaccgta aggtttattt accggtgatc cgcgcctacc
      781 gcgtcggccc ggagctggtg gcctggaccg acggcaaaaa tctgcgtgag ctgggcattt
      841 atcgacaaac cggctgctac attgaacgta ttcgacgtaa cgggattctg gcaaatccag
      901 acggtgatgc cgtgctacaa atgggcgatg aaatagcgtt ggtaggctat cccgacgccc
      961 atgcccgact cgatcccagc ttccgtaacg gtaaagaagt tttcgatcgt gaccttctcg
     1021 acatgcgtat cgtcactgaa gaagtggtcg ttaaaaacca taacgctgta ggtaaacgtc
     1081 tcgcacaact gaagttgacc gatcacggtt gcttccttaa ccgcgtcatt cgtagccaga
     1141 ttgagatgcc gatagatgac aacgtcgtgc ttaacaaagg tgacgtttta caagtcagcg
     1201 gcgatgcccg tcgcgtaaaa accatcgccg atcgcatcgg ctttatctcg attcacagcc
     1261 aggtcactga cttgctggca ttctgcgcct tctttgttat tgggctgatg atcgggatga
     1321 tcaccttcca gttcagcaca ttcagtttcg gcatggggaa cgctgccggg ttgttattcg
     1381 ccggaattat gctgggcttt atgcgtgcta accacccgac cttcggttac attccgcaag
     1441 gtgcattaag catggtgaaa gagttcggct tgatggtgtt tatggcaggc gttggtctga
     1501 gcgccggtag cggtattaat aacggcctgg gcgcgattgg cggtcaaatg ttgattgccg
     1561 gattgattgt cagtctggtg cccgtggtta tctgtttctt gttcggtgct tatgtattgc
     1621 gaatgaaccg cgcactgttg ttcggcgcaa tgatgggcgc acgcacctgc gcgccggcaa
     1681 tggagatcat cagtgataca gctcgcagta acatcccggc gctgggctat gcgggcacct
     1741 atgcaatcgc caacgtcctg ctgacgctgg cagggacaat catcgtcatg gtatggccag
     1801 gattaggata aaactgaagt tgccctgaaa atgaaatttt tttgcacaac cgcagaactt
     1861 ttccgcaggg catcagtctt aattagtgcc actgcttttc tttgatgtcc ccattttgtg
     1921 gagcccatca accccgccat ttcggttcaa ggttggtggg ttttttgttg cctaaaattt
     1981 atctactacc ctgcaaccct ctcaaccatc ctcaaaatct cctcgcgcga aagcggctta
     2041 cggtcggtga caaaatgcag cgtcatcccc tcaataaacg catcaagcgc gcgggcggtt
     2101 ccgggttcaa accattgttc gagcgtttgc tgactgcgct gcatccagtt ttgcattacc
     2161 gtttttaata gcggttttcg gctagccagc gcgtagagct ggtacatcag ctccatgtta
     2221 tccggcgttg ccacctgtga gctgtagatc atatcggtga tagcctggca tgcgccttga
     2281 gcatcactaa catcgctaaa aaatgcctga tattgccggg acatgatctc agtaaaactg
     2341 ctgaacgcct ccagcaacaa ctcatcaatt cctgaaaaat agtaggtcat cgatcccaac
     2401 ggtaccccgg caagggtagc aattttgcgg tgcgtaacag catgtattcc gtaaagtttc
     2461 accgcctcca gcgtggcctg gataattttt tctcgccgtt gcggatcgtt agcgcgacgc
     2521 atgtcatttc ctctgtctgc aattgtgtac aaatgtacac aaccttgcta atgttgtctt
     2581 ccctcttctt attttgacgt gatctatgac cgtaaattct tcacgtaatg cattgaaacg
     2641 ccgaacctgg gcgctgttta tgttcttctt tttgccgggc ctgttaatgg cgtcctgggc
     2701 aacccgtacg cctgctatcc gcgatattct ctctgtctcg atcgctgaaa tgggcggtgt
     2761 tctctttggt ctgtcgatcg gttcgatgag cggtattctc tgctcggcgt ggttagtgaa
     2821 acgctttggg acacgtaatg tcatcctggt caccatgtcc tgcgcattgg tcgggatgat
     2881 gatattaagt ctggcactct ggctgacatc gcccctgctc tttgccgttg gtctcggcgt
     2941 ctttggggca agttttggtt ctgcggaagt ggcgataaac gttgaaggtg ccgccgttga
     3001 gcgagaaatg aataaaacgg ttttgccgat gatgcacggt ttttatagcc tgggcacgct
     3061 ggcaggcgct ggtgtcggga tggcactgac ggcctttggc gttccggcaa cggtgcacat
     3121 tttattggcg gcgctggtag gcatcgcgcc tatatatatc gccattcagg caatccctga
     3181 cggtacgggc aaaaatgctg ccgatggcac ccagcatggc gaaaaaggca ttccttttta
     3241 tcgcgatatc cagttgctgt tgattggtgt tgtggtgcta gcgatggcct ttgccgaagg
     3301 ttctgccaac gactggttac ccttattaat ggttgacggt cacggtttta gccccacttc
     3361 cggctcgctg atttatgccg gttttaccct ggggatgacc gttggacgct tcactggcgg
     3421 ttggttcatc gaccgttaca gtcgcgttgc cgtggttcgg gccagtgcgc taatgggggc
     3481 gttgggtatt gggctgatta tttttgtcga tagcgcctgg gtcgctgggg tgtctgttgt
     3541 actctgggga ctgggtgcct cgctgggctt cccgctgacc atttctgccg ccagcgatac
     3601 cggccccgat gcaccaaccc gcgtcagtgt ggtagcaacg accggttatc tggctttcct
     3661 cgtcgggccg ccgctgctgg gctatctcgg cgaacattat ggattacgta gtgcaatgct
     3721 ggttgtactg gcgctggtta ttctcgcggc tattgtcgcg aaagccgtcg ccaaacccga
     3781 taccaaaacg cagacggcga tggagaatag ttgatgagca ttaaattaat tgcggtagac
     3841 atggatggta ctttcttaag cgatcaaaaa acctataacc gtgagcggtt tttggctcag
     3901 tatcagcaaa tgaaagcaca agacattcgc tttgtggtcg ccagcgggaa tcaatattat
     3961 cagttgatct ctttcttccc tgaaattgct aatgaaattg cctttgtggc tgaaaacggc
     4021 ggctgggtag tgagtgaagg caaagatgtt tttaatggcg agctgtcgaa ggatgcgttt
     4081 actactgtcg tggaacattt gctgacgcgc ccggaagtgg aaattattgc ctgcggaaaa
     4141 aatagcgcct atacgctcaa aaaatatgac gatgccatga aaacggtggc ggaaatgtat
     4201 tatcaccgtc tggaatacgt cgataacttt gacaacttag aagatatttt ctttaagttt
     4261 ggcctgaatc tttccgatga actgattcca caagtacaaa aagcattaca tgaggccatc
     4321 ggcgatatta tggtgccagt ccacaccggc aacggcagca tcgatctgat tatccccggc
     4381 gtacataaag ccaatggcct tcgccaactg cagaaattat ggggaataga cgacaacgaa
     4441 gtggtggtct ttggcgatgg cggtaacgat attgagatgc tgcgtcaggc aggctttagt
     4501 tttgcaatgg aaaatgccgg cagcgcggtc gtcgcagcgg caaaataccg ggcaggctcc
     4561 aataaccgtg aaggcgtact ggatgtgatc gataaagtgc ttaaacacga agcgccattt
     4621 gaccaataaa aacggcagca cgcccggcaa cacaatacct gaatgaaggc tgcataattc
     4681 gcggaaatta acccgctgca ttatttcagg cgaaatgttt atgaagaatt gtctactgtt
     4741 gggcgcgctt ttaatgggct ttactggtgt ggcgatggcg caaagtgtca ccgtcgatgt
     4801 gccgagtgga tacaaagtgg ttgtggttcc tgattcagtc agcgttccac aagcggtcag
     4861 cgtcgcgact gtgccgcaaa ccgtctatgt ggctcctgcg ccagctccgg cttaccgccc
     4921 gcatccttat gttcgccatc ttgccagcgt aggtgaaggg atggttatcg aacaccagat
     4981 tgacgaccat caccattaat tcgagaatgc ctgatcgcac aaagcagtca ggcatttttt
     5041 atccttcgtg agaatttccc atctgtttat cttttaaaaa gataaccatc agcgacagcc
     5101 acaaaattcc gttgacaagg ttgaagagat taaacagtcc gttgcccccg ttcagccagg
     5161 catgtttact gatttcaata ccgacggtaa agatcagcat ttgcagcatt cccatcgccg
     5221 cagaaaccgt acctttactc atatcgctgg caaacaaggt taatcgcacc agtcccgcat
     5281 tcgccagacc aatgccgaaa gcataaatac ttaacccggc ggtcatccat aaatacgcgt
     5341 gcgatgagat aaccgttgcc gcagcagcga ccaacagacc aatcataatc ggccatccgc
     5401 ccataataat cagcgaacgt acggtgcggc gcgaggtcag acgcgctaac agcaagttac
     5461 ccgcaattaa cgccccgaaa ataggcactt gcagcaaacc atattcatag ctgcttaact
     5521 gctcgccggt aatgatgata atcggcgact gggcgatcca cgccagcaac ggcagactaa
     5581 cgaatcccag cgcccccgcc acaaagcgac cgttcttcag caccagctta tagtcacgac
     5641 cgagttcttt cagtgacagt ttctcgccta tacgcgtggc ggtttcaggc atggctcgtt
     5701 gcagaccgaa aaaggagatc gctgccaatg cggcaaacaa aacaaacatc ccctcccagg
     5761 gcagcacatg gatccacgcc gcgcccacca gcggaccaag tagcggagca atcagcgcca
     5821 cgttcgccat cagcgcggtg atcttgatac aaaccgcctc ttcgaaggat tcctgaattg
     5881 cggcgtatcc cacagcgcca atgaaacaga ggcttatgcc ctgcaagaag cgcaacaggg
     5941 tgaattgttc aatgttttgc gccagcaata ttgccagaca ggtgacgata aaccacacca
     6001 ctcccgccag catcaccgga cggcgaccaa tacgatccga cagcggcccc aggagccatt
     6061 gtaaaaacat cccgcccgcc agatacgcgg tcatcgaagt aggaacccaa tcaatgcccg
     6121 cctgatattg ttccaccacg gccaacatac cgggttgaat catatcgttg ccgatatagg
     6181 ttgaaaattc gtaaagcacc agacagagag ggaaaagtaa cgcctgacgt ccaagcctgg
     6241 caccggaagc taatttattt tgcatgcaat ttcttcgcca ataataatcg cgcagagttt
     6301 aataaaagcg cagctaacga gaaagcgaat tttgtagctg aaaccacggt taagcacatt
     6361 cttacattat tgcgagtata gctacgcttt ctttaagttt tatttaacct atgcccgtta
     6421 caatcaccca ccgtaaacag gccgcttgag ggaaataaga cgatgccgct ttacccagtt
     6481 taacctgcac tttattctca acgacttgcc tgtattggct cccttttaat cactttgcgt
     6541 cgggaagtta tgctggaaaa tttgaatctc tctctattct ctcttattaa cgcgacgcca
     6601 gactcggctc cgtggatgat ctcgttggcg atttttattg ctaaagattt gattaccgtg
     6661 gtgccgctgc tggccgcggt actttggttg tgggggctta cagcacaacg gcaactggtg
     6721 ataaaaatcg ctatcgcgct ggcggtcagc ctgtttgtgt cctggacgat gggacatctt
     6781 tttccgcacg accgaccctt tgtcgaaaat atcggctata acttcctgca tcatgcggcg
     6841 gatgactcat tcccgagcga tcacggtacg gtgattttca cctttgcact ggcattttta
     6901 tgctggcatc gcctgtggtc cggctcactt ttaatggtgc tggccgtcgt cattgcctgg
     6961 tcgcgcgttt atcttggtgt ccactggccg ctggatatgc tcggtggatt gctggcaggt
     7021 atgattggct gccttagcgc ccagattatc tggcaagcga tagggcataa actctatcaa
     7081 cgtctgcaat cgtggtatcg cgtctgtttt gcattaccga tccgcaaagg ctgggtgcgt
     7141 gactgatctc tgctaaaaag tgtagtattg agcggctcgc ttcaataact attcagaggg
     7201 attatggaaa cacgtcgcga agagcgtatc gggcagctgc tgcaagaatt aaaacgcagc
     7261 gataagttac atcttaaaga cgccgccgcc ctgcttgggg tttcggagat gacgattcgt
     7321 cgcgatctga acaaccacag tgcgcccgtc gttttgctcg gaggctatat tgttctggaa
     7381 ccgcgcagtg ccagccatta cctgttaagc gatcaaaaat cccgcctggt ggaagaaaaa
     7441 cgccgggcgg caaaactggc tgcgacgctg gtagaacccg atcagaccct cttttttgac
     7501 tgtggcacca ccacgccgtg gattattgaa gcgattgata atgaaatacc tttcaccgcc
     7561 gtttgttatt cgctaaatac ctttctggcg ctgaaagaga aaccccattg ccgcgcgttt
     7621 ctttgcggtg gtgaatttca cgccagcaac gccattttca aacccatcga ttttcagcaa
     7681 acgctgaata atttttgccc ggatatcgct ttttattctg cggcgggcgt gcatgtcagt
     7741 aaaggcgcta cctgttttaa tcttgaagag ttgccggtaa aacactgggc catgtcgatg
     7801 gcgcaaaagc atgtgctggt tgtcgaccac agtaaatttg gcaaggtgcg tccggcgcgc
     7861 atgggtgacc tgaaacgctt tgatattgtg gtgagcgatt gttgcccgga agatgagtat
     7921 gtgaagtacg cgcagacgca gcgtattaag ttgatgtatt aatgacgtat aaccggatga
     7981 cgtttcgcgc catccggtta tcagaagatt aagagaacca gttgccgaac cactgatgga
     8041 atttcatcat cacgaaatcc cacatccgac caaagaatcc gccctcttcc acattttcca
     8101 tcacgatcag cggacgctgc tcaatggatt taccgttaag ctggaaatca atggtgccga
     8161 caacctgacc ttttttcagc ggtgcggtaa gctgcggttc cgttaacgtg tagctcgcct
     8221 tcaggttttt cagctgccca cgcggtatgg tcactgagcc cgcttcgcct gccccgagat
     8281 tcacttcgct cttatcacca aaccagacgc gctgagtcac aaaggtggca tcaggtttaa
     8341 ttggcgtcac ggtttcaaag aagcggaaac cccaggtcaa taatttctca gactcattaa
     8401 aacggatacg gtcggttttc gcccccagca ctacggagat taaacgcata tcgccctggg
     8461 tagccgaagc aaccagatta tatcccgcgc ctgccgtggt tcctgtctta atgccatcaa
     8521 cattcagatt gctgctccac agcagacggt tacggttagg ctgacgaatt ttgttgaaag
     8581 tgaactcttt ctctttatga atggcgtatt cttccggcac atcgtggatc aatgctttac
     8641 ccagcaatgc catatcgcgc gcggtactga actgccccgg cgcatccaga ccgtgcaccg
     8701 tctggaaggt agtgttggtc agacccagtt ttttggcata accattcatc aaaccaataa
     8761 atgactcctg gctcccggca acgtaatcgg ccagcgcaat acaggcgtca ttaccggact
     8821 ggataatcac acctttgttc aagtctgcca ccgaaacctg atcgcccggt ttgaggaaca
     8881 ttaccgatga accacgcagt gccggatttc ccgtcgccct agcatcttta ccgaccgtca
     8941 ccatatcggt gagtttaatc ttatcggcct taagcgcctg cccaaccaca tagctggtca
     9001 tgattttagt caggcttgcg ggatctagtt tctcatccgc attgccttct gccagcactt
     9061 taccgctggc gtaatccatt aaaatccatg cacgcgcatc cacgctcggc gcttcaacgg
     9121 tttgttccgc cgcgaatgcc gttggggcaa aaaggaataa aaatgcagaa cccgctgcaa
     9181 gaccacgaag gagagaggag tattgcgtca taaatgccac ccgagtatcc attcaaaaaa
     9241 aatacgttat atcgccgtat gataagttcg gtgattaata acgcacacac aaacttaaag
     9301 aaaccgtaag ttggtaaagt ttatgcaata tcctgccgct tcgctgcttc tggtgtcatt
     9361 tttttgccag ctgttgctta aaagttaact ttacttcacc atcggagtcc tgttcagcct
     9421 gtggctgcct gtcggaaaag gggtgagtat gattacgctg tggggtcgga ataattcaac
     9481 caacgtaaaa aaagtattgc tgacgctcga agaactggaa ctaccttatg agcaaattct
     9541 cgcgggccgt gagtttggga taaatcacga tgctgatttt ctggcgatga accctaacgg
     9601 gctggtgccg ttgttgcgtg acgacgaaag tgatctcatt ctttgggaat caaacgccat
     9661 tgtccgctat ctggcggcac agtacgggca aaaacgcctg tggatagact caccggcacg
     9721 tcgtgcggaa gcagaaaaat ggatggactg ggcaaaccag acactcagta atgctcatcg
     9781 cgggatcctg atgggattag tcagaacacc accggaagag cgcgatcagg ccgccattga
     9841 tgccagttgc aaagagtgcg acgccctgtt tgccctgctc gatgctgaac tggcaaaagt
     9901 aaaatggttc tctggcgacg agtttggtgt gggcgatatc gctatcgcac cgttcatcta
     9961 caatttgttt aatgttggcc tgacctggac accgcgtcca aatctgcaac gctggtatca
    10021 gcaactcact gaacgccccg cagtgcgcaa agtggtgatg attcccgtta gctaattgcg
    10081 tgggctaact ttaagtaatt ccccactgga ctcgtcggtg agaacgtata aataaccgtc
    10141 gggtccagtg cgaacatcac gaattcgctg ccctctgtcc gttaaaatac ggccatcttc
    10201 tgtcactttg tcgccgttga cgctcatcac aatgacatct ttatctttca gcgcgccaat
    10261 aaataatttt tgctgccact gggggaattt atcgctgtta tagaaggcca tgccgctcac
    10321 ggcgggcgaa tctttccagt aaaaaacagg ttgctcggtc ccggcgacga tctccccttt
    10381 cgcttccggt atcttaaagc ctgaatagtt gattccccag gttgccagcg gccagccgta
    10441 gtttttacct ttttgcggga tattaatttc atcaccaccg cgcgggccat gttcattcag
    10501 ccatagtgca ttactccacg gattcatcgc cattccttgc ggattacgaa tgccataaga
    10561 ccagatctca gcgcgcgaac cggattcctt tataaaagga ttatcatccg ggatttcgcc
    10621 ctggtcggtc agacgcacca gtttgccctg taatttatcc agatcctgcg ccgtcgggcg
    10681 ctgattgttt tcgcccagag caataaaaag ataaccttta ccgtcgaata ccagccgccc
    10741 gccaaaatgg ttgccggtag acagttttgg catctggcga aagacggtgc ggaagtcggt
    10801 cacttttgag agatcatcac ttaagcggcc ataacccaca gcagttccgg ctttgccatc
    10861 atcgccaact tcggaataac ttaacctgat gcggcgagac tgagcaaaat caggcgctaa
    10921 aaccacgtcc agcaggccgc cctgcccgtg cgcccaaacg tccggaactc cggaaagcgg
    10981 cgcagataat ccttttcctg cttgccagtg acgcaactcg ccgccgcgca gagtgattaa
    11041 cataccgtga ttatcgggta aaaaggccag tgcccaggga tggtcgagtt tgtcttgcag
    11101 tacttcgaca tttaccgttg caggagccgc ccagagagcg gaagaaagac aaataagggg
    11161 cacaaggaaa aagaattgtc gatgcataac gcctccggat tgactctggc ttaaagcgta
    11221 gtcagtggag gagataacaa attcattttt acaaaaactt aaacatgaag ggggagatgc
    11281 tttctccccc ttagttttca ggccttctca agcatggcgt gcttctgcag gctctggata
    11341 ctcagcgtta agctcatcag acaattttca agcttatcgg cgttgacggt aataacagtc
    11401 gggcaatcat ggtgcccact catcaaacat actgcggctg tcgctaatgc ttcttcagca
    11461 tgatgaagag cactccactc ttcctgatcc agatgaagat tcaaccgcag cgatttatcg
    11521 tgcagttcgc gattcagttt aaaaaagtta tctcgtagat gattgctttc gctgacggac
    11581 atgtatcctt ttgccttcct cagttgcacg tatgcggcga ggtcaacgcg tgcgtcgatc
    11641 aaccggttca gcaggtcgat tcgctgtctg tcaacgaaca tacttcgatc ctcctctttc
    11701 cagccttgtt gcaattaaat agtatggcta ttttttgagc aaaatgctgt ccaggatcaa
    11761 ttcttcacgc cgaattaaca aaatttacat ttccttcgcc tccgccagcg aatgagattg
    11821 cgatacaaat tttatccaga actctgtaga atccctgccc tgacctttcc tgtaactgaa
    11881 tattttttaa gctatgagca aagtaactcc ccagccgaaa atcggctttg tttcccttgg
    11941 ctgtccgaaa aaccttgtcg attcagagcg tattctcacc gaactacgca ctgaaggtta
    12001 tgacgtggta ccgagctatg acgatgcgga catggtgatc gtcaacacct gcggctttat
    12061 tgacagcgcg gtacaagaat cactggaagc cattggtgaa gcgttgaatg aaaacggcaa
    12121 ggttattgtg accggttgtc tgggggcaaa agaagatcag atccgcgaag tccacccgaa
    12181 agtgctggaa atcaccgggc ctcatagcta tgagcaggtt ctggagcacg ttcatcacta
    12241 cgtgccaaaa ccgaaacaca acccattcct gagcctggtg ccagaacaag gtgtgaaact
    12301 gacgccgcgt cattatgcct atctgaaaat ttctgaaggc tgtaatcacc gctgcacctt
    12361 ctgcattatt ccgtctatgc gcggcgacct ggtgagccgt ccgattggcg aagtgttaag
    12421 tgaagcgaaa cgtctggtag atgcgggtgt taaagagatt ctggtgatct cgcaggatac
    12481 ttccgcctat ggcgttgatg ttaaacatcg tactggcttc cacaacggcg agccggtaaa
    12541 aaccagcatg gtcagcctgt gcgaacagtt atcgaaactg gggatctgga cacgtctgca
    12601 ctacgtttac ccttatccgc atgtggacga cgtcatccca ctaatggcag aaggcaaaat
    12661 cctgccgtat ctggacattc cgttgcagca cgccagcccg cgcattctca aactgatgaa
    12721 gcgtccgggt tctgtagatc gccaactggc gcgcatcaaa cagtggcgcg aaatctgccc
    12781 ggaactgacc ctacgctcaa cctttattgt cggattccct ggcgagacgg aagaagattt
    12841 ccagatgcta ctcgacttcc tgaaagaagc gcgtctggat cgcgttggct gctttaaata
    12901 cagcccggtt gaaggtgcag acaccaatgc cctgcctgac caggttccgg aagaagtgaa
    12961 agaagaacgc tggaaccgtt tcatgcagct gcagcagcag atttccgccg agcgcctgca
    13021 agagaaagtg ggccgtgaaa ttctggtgat tatcgacgaa gtggacgaag aaggcgctat
    13081 tggtcgcagc atggcagatg caccggaaat cgacggtgcg gtttatctca atggtgaaac
    13141 caacgttaaa ccgggtgata tcctgcgtgt gaaagtcgag cacgccgatg agtacgattt
    13201 gtggggtagc cgggtttaat taattcaggc cgggcaaaat catttgtccg gcctgcgaat
    13261 aatgattact gccagctaat ctgtgccctg ccgtttttct tactcttata cagccgctca
    13321 tccgccagca ttttcaagcg ttcgacggtg gtacattcat ttgaatgcgc tacaccgata
    13381 ctggtactta aattaatgct tcccacctgg aaatgaacga tttcttttag aatcgatagc
    13441 aactcttcca gcgttccacc cgtataaatc accgcaaatt cgtcaccgcc gaagcggtag
    13501 actttacctt tatctactgg gatctgtgat ttaaggattt tcaccacttt catcaacact
    13561 tcatcgccca gcaaatgacc gaaggtgtcg ttaatgtttt tgaatttatc gacgtcaaac
    13621 aggcacaaat aaccgccttt ttccggcagc gcttttaaat cttcgtcaaa ggattttctg
    13681 cccattgctt tggtcaggtc gtccaggaac gccgagttat acatactgta gagttttttg
    13741 acatcggcag ccgaaaagaa aagcccgcca tccagtacgc gttcaaaatg gttattaatg
    13801 atggcttctt tctccataat accacgatta atcactctgc gtaccagata gaggcaactg
    13861 gtacccgata tcactgccac caatgcggca aagaaaataa tcaatgtaca gacccgcaaa
    13921 taaacatctt ttttatacgc aaatacgtac aatccggtcg gcaaataggc aaagtgctcc
    13981 atcgcttccg aaacggtgaa gatggcgttt ttagcattat attcatcacc ggtcaccggt
    14041 ttaccgttct taaacagaga gaacatcagg ttctcgctgt ccatcgccag cgattttgac
    14101 agtaaagaaa aacgctccag accaagcaaa aatatcagac tacgattgtg agttaccgga
    14161 tagaggtaat agacgaaggt tttaccgtca aaagagataa accctgtatt tttgacatgt
    14221 cgatacttca caacctgcat aatatctgca caataatttt tctcgaactc ctttacctga
    14281 atacattcgt cactggaaat cagataagga ccgacatcgt acaaataaga gggtgaaacc
    14341 gagtcggcgt aagctgtgcg caagccaacc aacagctgtt cctccgtggg atttagcgtg
    14401 ttgataagat caattgccac gctacgccga tattcagcaa tatttgccac cgcaaaagca
    14461 gtatcaataa cggactgttt caggctatac acccgttcct ttaccatttg agtgtagatc
    14521 ccgcaggcaa ctgctgaaat catgataaaa atcagcagac tgactgtaag tacgaactta
    14581 ttgattctgg acatacgtaa actactcttt tactaatttt ccacttttat cccaggcgga
    14641 gaatggcatg ggtttctggt acagataccc ctgagcctga acacatccta atttaattaa
    14701 ttcgcgcgca acgtcttcgc tctctacgcc ttccgcaatc accgggatcc ggttatagcg
    14761 tgccagatcg aaaataatgc gcacaatttt tcccgcagta ccgaaaatat cgccggtaaa
    14821 ttgcgagtcc acctttatgc tgtctggatt aatttcataa aaacgtttca ggtttgacaa
    14881 accggtgcca aagtcatcaa tcgatatccg taccccttgt ttacgcagtt gttcaatatt
    14941 gagataaaaa tgttcattaa ttcgctcgat cacggtttca gtgatctcaa cacagaggct
    15001 gttcgccttc aggccatttt ctttcatgat ggtggtaaaa cgctcatgaa agtgcggttc
    15061 gtttaactgc cagggcgaaa cattaatatg cagtaagaaa tcatccttca gcgacgcacg
    15121 ctgactaaaa tgtctgaatt cacccattgc cgttttaata atctgataac ccagctcatt
    15181 gataaacccg atatcttcag caatggtaat gaacttcagc ggtgaaatga tcccccgctc
    15241 cgcagaaacc caacggcaca acgcctccgc gcccagaatg gcgcgggtgt taatatcaac
    15301 gatcggttga tagacgagga atagttcgcc aatttccatt gcattgcgaa tattacgcgc
    15361 aatccagata ttctcttcta tttcgttgag tttcgcgtca tcacagaaaa taaactcgga
    15421 gaacatatgg tcacggatac tggaaatcgc cagtttcagt ttttctgcgt aactccaggc
    15481 gttttccccc tgcaaaggtt cacaaatggc agacttatgg atgcgcagat tgcggtagcc
    15541 aaagctgctg tcaaaatcgt ttaccatcgc tattttacgg gtaaatgtct gtacattttc
    15601 ccgacacaga agtaaataga gatcggcatt gaatgtcacg atatcgcagc attgcgcata
    15661 tttctcggca attcgctgac acaatttcct gacgatttta ttgcgttcat caacaccaaa
    15721 caccgcttcc acggcttcca gaccacacag tttgatgatc cccacagcca gatactgatt
    15781 attgttggac tcaataatcg ccatattttt aataaaaccg ctttcctgat cgtaagagat
    15841 cagtgagagc aatttatttg accgttcaat ttcggcatct ttcatttccg cgatcgaatt
    15901 tttgatgctg ataatctctt tcgcatcgcc ttcgcgaatt ttcagagcct cgatctgatc
    15961 cgttgagtcg ggcaaaaacg ccagcgtatt aaccagctcg gtcatttcag aaaattgccg
    16021 acggaacaca cgagtggtca tgaaatatac caccagtaac acgataataa tgaacgcaaa
    16081 cggtagataa aaaagtttat ctgatgcgtt caataaatta ccgccaggat aataaaaata
    16141 gatttcgaac aatgcattat ttggcactgc tgatgtcttt gcaatatact ccgtatcgac
    16201 agaatcaata atattataat taccttcgct attataaata atcagttttt cacgagcgag
    16261 ttgattcttg gcaatgatct catgaccttg tttcaaaaat agaacttcat cattaacgct
    16321 gatttgatca agatactcgt tcagataccg ccagtttaaa tcgacatgaa ttttatctac
    16381 cgctaacaaa tcgtgatctt tgccgttgat acgtagcgta aaagagatac attttttacc
    16441 cggacgatca aagcaattgt atgccggatt ccagttgttg ttagagtcat ctgaagccac
    16501 cgaccacggt cgtttcgatg ggttaaaatc ggcaaaaata acccgccctg actcgtcgac
    16561 aagcggtcca tttacttgtt cctgatgata aacaacgatt ttatcattcg ccctccgcga
    16621 aaagagataa tatttattat catcaagtac cagtcccacc gagtctaaaa atggcatcat
    16681 ttccattttc agaatcacgg cgcgttgaat ctcctctgta ttttttaata aatacagtga
    16741 gtcctttaat gtcagggccg aacgttcaat atctttaaag aaatagccaa cgtttttctg
    16801 aataagttca aagcggctat cggcacgttt taccgcgcgt tccgatacca gttgatagtt
    16861 aatgatgaaa aaaagaccaa taaatgacag tgctgccaat aaaaataaaa ttatcagcct
    16921 tatctttatc ttttcgtata aactcagcat gttaatacat ttaacaaaat aactatctga
    16981 acgctgtgcc gctgcaaaaa tagtcccttg ctgcggcttt ttaaccaaat tacccgattc
    17041 tacaaaatca gcagaaagtt acaacacttg cttagggcaa taatttcctg tgaggtgatt
    17101 accctttcaa gcaatattca aacgtaacta tcctttaatt ttcggatcca gcgcatcgcg
    17161 taaaccatcg cccaacaaat tgaacgccag tacggtcaga aaaatagcca gggccggaaa
    17221 aacagcgaca tgcggcgcga taaccatatc cgctcgtgcc tcattgagca ttgctcccca
    17281 ctctggtgtc ggcggctgcg caccgaggcc gagaaatgac aggctggcgg cagagataat
    17341 cgaggtgcca atgcgcatgg tgaaaaacac cacgatagac gagacggtcc caggcaagat
    17401 atgacgcaat aaaatggtca tatcgctggc accaatactg cgtgctgact caataaaggt
    17461 ttgctgtttc aacaccagcg tgttgccgcg caccagtcgg gcaaacgcgg ggatggaaaa
    17521 aatggcgact gcgataatca cgttagcaat gccgcttccc aacaccgcaa caacagcgat
    17581 cgccagtaaa atacccggga aggcaaacag cacatcgcaa atgcgcatga tcagccgatc
    17641 ccaccagcct tcataatatc cagccaacaa gcccagcaac gtcccgatcg ccgcaccgat
    17701 aaacacggca aacacgcccg ccgccagcga gatttgcgca ccaaccagga cacggctgaa
    17761 aatgtcgcgc cccagtgaat cgacgccaaa ccagtgctgc aaagaaggtc cgttattcag
    17821 attgtcataa tcaaaataat tttcggcgtc atagggagcg atccagcgtg caaaaatggc
    17881 caccacaatc aataaaataa cgaataatgc ggcggtcatc gccatatgct gacggcgaaa
    17941 tcgtcgccag aattcatgcc acggtgtacg cacctggtca ggtttgacca gtggcatggc
    18001 gtttaacacc gcctgacgtc gccagttaaa tagtcgcatc cttacttgta cctgatagcc
    18061 gggttaatgg cggcgtaaag cacatccacc actaagttga taagaataaa ttccagcgag
    18121 aaaagcagaa tttccgcctg aatcaccggg taatcgcgca tttctacgga gtcaacgagt
    18181 aagcgtccaa gtccgggcca gttgaaaact ttctccacca cgatagaacc accgagcaaa
    18241 aagccaaact gtaagcccat catggtcact accgggatca tcgcgttacg tagcccgtgt
    18301 ttgaggacac cccaggtttc gctcacccct ttcgccctcg cggtacgcat ataatcttcg
    18361 cttaaaacat cgacaaacga cgcgcgggta aagcgcgcca tcacggctgc cactgccgcg
    18421 ccgagcgtca gggagggtaa aatgtagtgc tgccaactgt ctgctcccac ggtaggcagc
    18481 cagcccagtt caacggagaa tacctgaatt aaaagcatcc ccagcgcaaa tgccggaaac
    18541 gagatccccg acaccgcaat ggtcatactc aatcgatccg gccaacgatt acgccagacg
    18601 gcggcgataa ttcccgccgc cataccaaat atcaccgccc agaccatact ggttatggtc
    18661 agccacagcg ttggcataaa gcggctggca atctcatcgg caaccggacg acgcgacacc
    18721 atcgacaggc caaaatcccc ctgcacagca ttgctgatat agtgccagaa ctggtgatac
    18781 agcggctgat ccaaccccag ttgctgacgc accagttcta taacctacgc atcagcttcg
    18841 ggcccggcaa tcaatcgcgc cggatcgccg ggcagcatat gcacaaataa aaacaccagc
    18901 accgagacga taaacagcgt cggaatcaac cccagtaagc gtttgataac gtaattaagc
    18961 attccactcc ctgcgttgct tattgcaaat ccgcgtcttc aaagctgaag ccggtgtctg
    19021 gcatgatcca aaaaccggtc aggtttttac tgtgtgccga caccagtttt tctaccacca
    19081 gcgggatcca cggcgactct tgccagatga tatcctgcgc cgccttatac aagcgggtct
    19141 tttccgccgg atcattagtt ttcagtgcct gagccaagaa gtcatccacc tgtttattgc
    19201 tgtaaaatgc ggtattaaac agcgtcggtg gccagttttg cgaggcgaac agtggcgata
    19261 gcgcccagtc cgcttcgccg gttgaagccg accagccagt gtagaacatc cgcacgccgc
    19321 tctctttttg ccctttacct tcaacttctg ccgcccgctg tccggcatcc atcgcagtca
    19381 cctggacttt aatcccgacc tgcgctaact gctgctgggt aaattgcagc actttctgcg
    19441 cggtgctgtg gttatgtgac gaccacagcg tggtattgaa accgttggga tatcccgcct
    19501 ctttcagtaa ttcgcgcgct ttcactggat cgtaaggcca cggtttataa ctttgcgcgt
    19561 aggcgatact cggcggtacc acaccagtag ctggcgttgc atagcccgca aaggcaactt
    19621 tcaccaacgc cggacggtta atggcgtaat tcagcgcctc acggaccttc gggttatcga
    19681 atggcttttg cgtcacgttc atactgatat aacgctgcat aattgacgga ctggccatca
    19741 actcgatatt tttgttttta tccagcagtg tggcctgctc gtaaggaatg gggaaagcaa
    19801 actgcgcttc accggtttgc agcattgccg cgcgggtgtt gttattcgcc accggacgcc
    19861 aggttatgct gtccagttta ggcaatcctg gctgccagta acccgcgaat tttttcacct
    19921 tcacaaaatc ggtctgattc caggtatcca gttcatacgg tccggttccc accggatgaa
    19981 aaccaatctc cttgccatat ttttccagcg ctgccggtga aatcatcgcg gtcgccggat
    20041 gggcaagaat attaataaac gctgagaacg gctgtttgag ggtaatcttt accgttgtcg
    20101 gatcgatcgc ctccgttttg gcaatattct tatacaggtt atagcgttta agatgattcg
    20161 ccggatcgct ggcccggtcc agattcgctt ttaccgccac tgcgttgaaa tcggtgccat
    20221 cctggaattt aattccttcc cgcaatttca cggtgtaagt aatgccgtca tcggaaacgg
    20281 tataactctc cgccagcacg tttttcagtt tcatctcttt atccagaccg aacagcccct
    20341 agtaaaacga tttcgctacg gcctgagata acgtgtcatt cgcgtcatac ggatcgagcg
    20401 tggtgaaatt cgatcctacc gccaccacca catctttggc agcgaatgca caagatgcca
    20461 tcaacgctgt cgcaatgccc agcgccacta acccactacg gtgtacagct cttgccattt
    20521 tattctccgc ctgaatgtta tctacgcatg aatgcgtatt ctgattgtgg ttgtgcgacg
    20581 taatgccccg gcccgacgca ttgcaacgag acggctgcca cctcttcgcc acgcagatga
    20641 atattgctgg gaagatcgtc cgacagcagt acacgctgcg gtcgttgtcg ggacggttca
    20701 gcgaccagaa ctgccgccag taatttacgc gtataaggat gctgcgggtt ttcgaagacc
    20761 gcgcaccgtg gaccaatttc aacaatttgc ccgagataca tcaccgccac acgatgacta
    20821 atccgctcta ccacagccat atcgtgggag ataaacagat acgcaatgcc gaaatcacgc
    20881 tggagatcga gcaacaagtt gataatctgc ccgcgaatag aaacatccag cgccgaaacg
    20941 gcttcgtcgg caatgatcac ttttggattc aatgccaatg cgcgggcaat gcagatgcgc
    21001 tggcgctgac cgccggaaaa ctcatgcggg taacgccagg catgttcagg taacaggccc
    21061 acgcgctcca gcaaccacgc aacgcgtgca gccgcgtctt tacctggcaa taaaccgtgt
    21121 acacgcagcg gttcgataat cgaatcaccg atggtctgac gtgggtccag cgaagcgtaa
    21181 gggtcctgaa aaataaactg aatatcccgg cgcaatgcct gaagtttgcc gggtgacaag
    21241 gtatcgattc gctgaccgtt aaagataatt tcgccgccct gcgattcgac caggcgcagc
    21301 aactcccgcc cggtagtaga tttaccgctg ccagactcgc ccaccagcga tagggtttcg
    21361 ccaggccaga gatcaaaact gactttctca acggcatgca cttcccgcgt tacgcgattc
    21421 aacaaaccgc tgcgcaaagg gaaacgggtg acaagattac gcactcgtaa aacaggttcg
    21481 ccatccacca ccgttttctg ctcga
//
LOCUS       DAJVTL010000070        21455 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.070, whole genome shotgun sequence.
ACCESSION   DAJVTL010000070 DAJVTL010000000
VERSION     DAJVTL010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21455
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.070"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            227..835
                     /locus_tag="OQQ26_002514"
     CDS             227..835
                     /locus_tag="OQQ26_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HCS1857936.1"
                     /translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
                     PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
                     AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA"
     gene            933..2324
                     /gene="selA"
                     /locus_tag="OQQ26_002515"
     CDS             933..2324
                     /gene="selA"
                     /locus_tag="OQQ26_002515"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HCS1857937.1"
                     /translation="MTTETRSLYSQLPAIDRLLRDSSFFSLRDTYGHTRVVELLRQML
                     DEAREVIRDSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAE
                     AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
                     TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
                     MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALSEKLPTLRLLTRSVEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
                     QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
                     LEDEQRFLEMLLK"
     gene            2321..4165
                     /gene="selB"
                     /locus_tag="OQQ26_002516"
     CDS             2321..4165
                     /gene="selB"
                     /locus_tag="OQQ26_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HCS1857938.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
                     GNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREH
                     LLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
                     RALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHT
                     PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAG
                     ARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGE
                     GMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
                     PMEDEALVLLLIEKMRESGDILSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWW
                     VRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
                     TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
     gene            4355..5506
                     /gene="yiaY"
                     /locus_tag="OQQ26_002517"
     CDS             4355..5506
                     /gene="yiaY"
                     /locus_tag="OQQ26_002517"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine dehydrogenase"
                     /protein_id="HCS1857939.1"
                     /translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNMLTK
                     LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
                     CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
                     MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
                     AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLP
                     HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
                     DIRAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM"
     gene            5626..6921
                     /locus_tag="OQQ26_002518"
     CDS             5626..6921
                     /locus_tag="OQQ26_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HCS1857940.1"
                     /translation="MAIKSPPTLIPLSHLSGEELQAHLRFNRVTDEKGRYLPFDELQY
                     RIKKGENVEVAWTLTRLARNAAIQRINYCNEAGEQAGFNITPVIAEACELVDKHATAL
                     ALKDQTERLRGAGAELSQLRLEEPITSSQLEGANTTTLVARKMLETGRSPRTEDEHMI
                     AGNARLMAEIPHLLAEPLTPALIRQLHAIGMGGINDAKYRPGEFRETDDVVIADYDGN
                     IVHQPPAATLLPERLEKVCQWLNSHEGYIHPLIRACILHFMLAHEHPFRDGNGRTSRA
                     LFYWYMLKSGYDVFKYISISRLLHAAPVKYAASYQYTESDGMDLTYFLEYQAGVIKRA
                     LHNWQQHIDEITQRSAKLDSVLFSSGVLKRLNPRQVTLLNVILANPGKEYTVAEISAS
                     LGVSDNTARADLRTIVKEGFAQEKKINDQQAVYVAHYQL"
     gene            7029..8567
                     /gene="aldB"
                     /locus_tag="OQQ26_002519"
     CDS             7029..8567
                     /gene="aldB"
                     /locus_tag="OQQ26_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase AldB"
                     /protein_id="HCS1857941.1"
                     /translation="MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQN
                     LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHISVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
                     PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
     gene            complement(8786..8929)
                     /locus_tag="OQQ26_002520"
     CDS             complement(8786..8929)
                     /locus_tag="OQQ26_002520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857942.1"
                     /translation="MIKNRKTSTMQIKRIKPSIIYHLLLIVLGIPMVIYGLVCPLTIE
                     TRD"
     gene            9112..9435
                     /locus_tag="OQQ26_002521"
     CDS             9112..9435
                     /locus_tag="OQQ26_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HCS1857943.1"
                     /translation="MFLDYFALGVLIFVFLVIFYGIIILHDIPYLIAKKRNHPHADAI
                     HVAGWVSLFTLHVIWPFLWIWATLYRPERGWGMQNHDSSVVQLQQRIAGLEKQLADIK
                     SSSAE"
     gene            9441..10577
                     /locus_tag="OQQ26_002522"
     CDS             9441..10577
                     /locus_tag="OQQ26_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HCS1857944.1"
                     /translation="MDLLIILTYVAFAWAMFKIFKIPVNKWTIPTAALGGIFIVSGLI
                     LLMNYNHPYTFKAQKAVISIPVVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQAR
                     VDRLMADIVTAENKQRALGAELDEMAANTQQAKATRDKFAKEYQRYSRGSQAKVNPFS
                     ERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLVLGEHSQIASLKAQLAEAKYNLE
                     QTIVRAPSDGYVTQVLIRPGTYAASLPLRPVMVFIPDQKRQIVAQFRQNSLLRLAPGD
                     DAEVVFNALPGKVFSGKLAAISPAVPGGAYQSTGTLQTLNTAPGSDGVIATIELDEHT
                     DLSALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWVHYLYLDH"
     gene            complement(10574..11548)
                     /locus_tag="OQQ26_002523"
     CDS             complement(10574..11548)
                     /locus_tag="OQQ26_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1857945.1"
                     /translation="MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADF
                     ESKVGLKVFDRTTRQLMLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTIYA
                     PTGIITYLSKHVIDKIKDIGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDE
                     SLVASFITQYAVTAYASQRYLEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGS
                     KEVRDYRVKGNYVCDNTQSALELARNHLGIVFAPDKSVQSDLQDGTLVPCFQHPYEWW
                     LDLVAIFRKREYQPWRVQYVLDEMLREIRHQLAQSQQLRPEQAAESED"
     gene            11672..12412
                     /locus_tag="OQQ26_002524"
     CDS             11672..12412
                     /locus_tag="OQQ26_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HCS1857946.1"
                     /translation="MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENT
                     KAIPLISYEGDTFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPTDNDDYAMQQLDK
                     RDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGV
                     LYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMTSAGYS
                     ELPEEITDSPMIDRNESFTFVTGVSWRF"
     gene            complement(12542..14512)
                     /locus_tag="OQQ26_002525"
     CDS             complement(12542..14512)
                     /locus_tag="OQQ26_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 127 protein"
                     /protein_id="HCS1857947.1"
                     /translation="MNISEVDLRKLTVSDPFLGQYQQLVRDVVISYQWDALNDRIPEA
                     EPSHAIENFRIAAGLQEGEFYGMVFQDSDVAKWLEAVAWSLCQKPDAELEKTADEVIE
                     LIASAQCEDGYLNTYFTVKAPEERWSNLAECHELYCAGHLIEAGVAFFQATGKRRLLE
                     VVCRLADHIDRVFGPDEDKLQGYPGHPEIELALMRLYEVTEEPRYLALTNYFVEQRGA
                     QPHYYDQEYEKRGQTSHWHTYGPAWMVKDKAYSQAHLPLAQQQTAIGHAVRFVYLMTG
                     VAHLARLSHDDSKRQDCLRLWNNMAQRQLYITGGIGSQSSGEAFTSDYDLPNDTVYAE
                     SCASIGLMMFARRMLEMEGDSQYADVMERALYNTVLGGMALDGKHFFYVNPLEVHPKS
                     LKFNHIYDHVKPIRQRWFGCACCPPNIARVLTSIGHYLYTPREDALYINIYAGNSMEV
                     PVENGTLRLRVSGNYPWQEQVTIAVESPQPVRHTLALRLPDWCTQPQIILNGEEVEQD
                     IRKGYLHITREWQEGDTLNLTLSMPVRRVYGNPLVRHVAGKVAIQRGPLVYCLEQADN
                     GESLHNLWLPADAPFTTFEGNGLFRHKILIQAPGYRYDQSNPEQQPLWHYDSAPAKRQ
                     TQTLTFIPWFSWANRGEGEMRIWVNEEKHCHP"
     gene            complement(14523..15923)
                     /locus_tag="OQQ26_002526"
     CDS             complement(14523..15923)
                     /locus_tag="OQQ26_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857948.1"
                     /translation="MTSTPITTADIANGKIDDALSVREKIGYGLGDAGGTVITCLIMN
                     FLTFFYTDVFGLTPALVGTLFIALRVFDAISDPVMGVIADRTQSRWGRFRPWQLWIAI
                     PIGIIGILTFTVPDASMGVKIAWAFGTYLLLSVGYTAINVPYCALINTMTTRHNEVIS
                     CQSWRFVLCGVAGFLVSVGLPWMVDRFGQGNAARGYQLGVGVLCAIAVVMFLCCFFWV
                     RERVPLSTMGKFTLREHLAGLRNNDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQG
                     STGYTSLFFTMVTFASIIGSVIVSPLTRRFDTVKIYYYTNLLLAALAVLMWFLPSGPA
                     YQTLWLAVILGNGVILGFTLPLHFSLMAFADDYGEWKTRVRSSGMNFAFNLFFIKLAW
                     ASSAGIISLLFIFVAYQPGVENQTASSLGGITAMETLLPALFHLLLAGAIRFCKLNNP
                     MMSRIATDLRQRHVQP"
     gene            16149..16965
                     /locus_tag="OQQ26_002527"
                     /pseudo
     CDS             16149..16965
                     /locus_tag="OQQ26_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312484.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            complement(16997..17692)
                     /gene="araD"
                     /locus_tag="OQQ26_002528"
     CDS             complement(16997..17692)
                     /gene="araD"
                     /locus_tag="OQQ26_002528"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HCS1857949.1"
                     /translation="MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQWMVIKPS
                     GVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTHLALYRRYAEIGGIVHTHSRHAT
                     IWSQAGLDLPAWGTTHADYFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSP
                     AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKH
                     YLRKHGANAYYGQ"
     gene            complement(17686..18546)
                     /locus_tag="OQQ26_002529"
     CDS             complement(17686..18546)
                     /locus_tag="OQQ26_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418039.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HCS1857950.1"
                     /translation="MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDER
                     LSRLDWSAAQRASLVTAMIEAGVAIPSMCLSAHRRFPFGSRDEAVRERAREIMSKAIR
                     LARDLGIRTIQLAGYDVYYEDHDEGTQQRFAEGLAWAVEQAAASQVMLAVEIMDTAFM
                     NSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLSIDRIAAIHLKDTQPVTE
                     QSPGQFRDVPFGEGCVDFVGIFKTLHQLNYRGSFLIEMWTEKAKEPVLEIIQARRWIE
                     ARMQEAGFIC"
     gene            complement(18539..19201)
                     /gene="ulaD"
                     /locus_tag="OQQ26_002530"
     CDS             complement(18539..19201)
                     /gene="ulaD"
                     /locus_tag="OQQ26_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HCS1857951.1"
                     /translation="MSRPLLQLALDHSSLEAAQRDVTLLKDSVDIVEAGTILCLNEGL
                     GAVKALREQCPDKIIVADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMA
                     QRCGGEIQIELFGNWTLDDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALS
                     DIGLELSITGGITPADLPLFKDIRVKAFIAGRALAGAANPVQVAADFHAQIDAIWGGA
                     RA"
     gene            complement(19198..20694)
                     /gene="lyxK"
                     /locus_tag="OQQ26_002531"
     CDS             complement(19198..20694)
                     /gene="lyxK"
                     /locus_tag="OQQ26_002531"
                     /EC_number="2.7.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-xylulokinase"
                     /protein_id="HCS1857952.1"
                     /translation="MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPSWA
                     ERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQGKGLFLLDKNNKPLGNAILSS
                     DRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTH
                     DYLRWCLTGVKGCEESNISESNLYNMSRGKYDPSLTDWLGIAEINHALPPVVGSAEIC
                     GEITAQTAALTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGL
                     RDGEAHPYVYGRYVNDGQFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAG
                     GDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFT
                     DVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYRNFSE
                     AQRDLQHPVRTLLPDMTAHQLYQQKYQRYQHLIAALQGFHARIKEHTL"
     gene            complement(20698..21207)
                     /gene="dctP"
                     /locus_tag="OQQ26_002532"
     CDS             complement(20698..21207)
                     /gene="dctP"
                     /locus_tag="OQQ26_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HCS1857953.1"
                     /translation="MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAA
                     KKFNELLQEKTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMN
                     LLDVPFLFRDTAHAHKTLDGMKEAGVEVITDLDRKAFSDALGTQVRDMFVKDVPQGAE
                     LLKAVDEVQ"
     gene            complement(21220..>21455)
                     /locus_tag="OQQ26_002533"
     CDS             complement(21220..>21455)
                     /locus_tag="OQQ26_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HCS1857954.1"
                     /translation="EAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDA
                     VRGVFPYVLVLYSLLVVFVFIPDLIILPLKWIN"
BASE COUNT         5112 a         5439 c         5791 g         5113 t
ORIGIN      
        1 gctcatcctt gttttatcgg gttatttgtc tgcttccagg caaaacccta cagatttata
       61 agaaagcctt aagtgagata tccatcagat agaaacaatt aggaaaatat ttatatcacc
      121 atgataaata tgtgatttat ttggaagtaa caaactatca acattttctg ccctttttcc
      181 catcaccagg ccatactgat atttttcctc gcacaaagga ctcggcatga aactcgtcgg
      241 tagctacacc agcccgtttg tacgcaaact ttctattctg ttgttagaaa aaggcataac
      301 tttcgaattt attaatgaac tgccctataa cgcggacaac ggcgtggcgc aatttaaccc
      361 gttaggaaaa gtgccggtgc tggtgaccga agagggcgaa tgctggtttg attcgccgat
      421 catcgctgaa tatattgaat taatgaatgt cgctccggcg atgttgccgc gcgatccgct
      481 ggagtcgttg cgggtgcgca aaattgaggc actggcggat ggcattatgg atgccgggct
      541 ggtatcggtg cgtgaacagg cgcgtccagc ggcgcagcag tctgaagatg aattgttacg
      601 ccagcgggag aaaatcaacc gcagtctgga tgtgctggaa ggatatctgg tcgatggcac
      661 actcaaaacc gatacggtca atctggcgac tatcgccatt gcctgtgccg tcggatatct
      721 caatttccgc cgcgttgcgc caggctggtg tgtcgaccgc ccacacttag tcaaactggt
      781 cgaaaacctg tttagccgcg aaagttttgc tcgcaccgaa ccgccaaagg cttgatgcgc
      841 gatatgtcct cctgacccat ctcacgttac aatccgtggt tatgttaaac gcccttctcc
      901 gtgtgagagg gccttgatca gccaggtttc ctatgacaac cgaaacgcgt tccctctata
      961 gtcaacttcc ggctattgat cgcttattgc gcgatagctc cttcttttct ttgcgtgata
     1021 cttatggtca cactcgtgtg gtggaattgc tgcgtcagat gcttgacgaa gcgcgagaag
     1081 tgattcgtga cagccagacg ctgcccgcgt ggtgtgaaaa ctgggcgcaa gaagtcgatg
     1141 cccggttgac gaaagaggcg cagagcgcgc tgcgtccggt gatcaacctg acgggaaccg
     1201 tgctgcatac caaccttggg cgagctttac aggcggaagc cgcggtggaa gccgttgcgc
     1261 aggctatgcg ttcgccagtg accctcgagt acgatctgga cgacgccgga cgcggacatc
     1321 gcgatcgggc gctggcgcag ctgctgtgcc gtattacggg ggcggaagat gcctgtatcg
     1381 tcaataacaa tgcggcggcg gtgttattga tgttggcggc cactgccagc gggaaagagg
     1441 tggtggtatc tcgcggcgaa ctggtggaga ttggcggcgc gtttcgtatt cccgatgtta
     1501 tgcgtcaggc aggctgcacc ctacacgaag tagggaccac taaccgcacg cacgcgaatg
     1561 attatcgtca ggcggtgaat gaaaataccg cactgttgat gaaagtacat accagtaact
     1621 acagcattca ggggttcacc aaagcgatag acgaagctga actggtggcg ctcggcaaag
     1681 agctggatgt tccagtggtg actgatttag gcagtggctc gctggtcgat cttagccagt
     1741 acggtttgcc gaaagagcca atgccgcagg agttgattgc ggcgggcgtc agtctggtga
     1801 gcttctccgg cgacaagttg ttaggcgggc cgcaggcagg gattatcgtt ggtaaaaaag
     1861 agatgatcgc ccgcctgcaa agccacccgc tgaagcgtgc attacgcgcg gataaaatga
     1921 ccctcgcggc gctggaagcc acgttgcgtc tttatttaca ccctgaagct ctgagtgaaa
     1981 aattaccgac cctgcgcctg cttacccgca gcgtagaggt cattcaaatc caggcacaac
     2041 gtttacaggc tccccttgcc gcacattacg gcgcggagtt tgcggtacag gttatgccat
     2101 gtctttcgca gattggcagt ggttcgctgc cggttgatcg cctgccgagc gcggcattaa
     2161 cgtttacacc ccatgatgga cgcggtagcc accttgagtc attagccgcc cgctggcgtg
     2221 aattgccagt gccggtgatt ggtcgtattt atgacggacg attgtggctg gatttacgct
     2281 gccttgaaga tgagcaacgg tttttggaga tgttgttgaa atgattattg cgactgccgg
     2341 acacgttgac cacggcaaaa caaccttatt gcaggcgatt acgggcgtaa atgctgaccg
     2401 tctgccggaa gaaaaaaagc gcggcatgac catcgatctc ggctatgcct actggccgca
     2461 gccggatggt cgcgtgcctg gttttatcga cgttcccggt catgaaaagt ttctttccaa
     2521 catgctggcg ggcgttggtg gtatcgatca cgcgctgttg gtggtggcgt gcgatgacgg
     2581 cgtgatggca cagacccgtg agcatctggc gattttgcag ctgaccggta acccgatgct
     2641 gacagtggcg ctgaccaagg ccgatcgcgt ggacgaagcg cgtgttgatg aggttgaacg
     2701 ccaggtaaag gaggtgctgc gggaatacgg ttttgctgag gcaaaactgt ttatcaccgc
     2761 agcaaccgaa ggtcggggaa ttgatgccct gcgcgagcat ctgcttcagt tgccggaacg
     2821 cgagcacgcc agccaacata gtttccgcct cgcgattgac cgcgcattta ccgtaaaagg
     2881 tgccgggctg gtcgtcaccg gtacggcgtt aagcggggaa gtgaaggtag gcgattcact
     2941 ctggctgact ggtgtaaata aaccgatgcg tgtacgtgcg ctgcatgcgc aaaaccagcc
     3001 aacagaaacc gccaatgccg ggcagcgtat cgcgcttaac atcgcgggtg atgcggaaaa
     3061 agagcagatt aaccgtggcg actggctgct tgccgatgtg ccgccagagc cgttcacacg
     3121 ggtgattgtc gagcttcaaa cccatacgcc gctgacccag tggcagccgc tgcatattca
     3181 ccacgccgcc agccacgtca cgggacgcgt ttcactgctg gaagataacc ttgctgaact
     3241 ggtcttcgac accccgttat ggctggcaga taacgaccgc ctggtattgc gcgatatctc
     3301 ggcccgcaat acgctggcgg gggcgcgtgt ggtgatgctt aacccgccgc gtcgcggtaa
     3361 acgtaagccg gaatatctgc aatggctggc gtctcttgca cgggcgcaga gcgatgccga
     3421 tgcgttatct gttcatctgg aacgcggcgc ggttaacctt gcggatttcg cctgggcacg
     3481 gcagctcaac ggcgaaggga tgcgcgaact actgcaacag ccgggctata ttcaggctgg
     3541 ttatagcttg ttgaatgcgc cagttgccgc ccgctggcag cggaaaattc tcgacacatt
     3601 agcgacttat catgagcaac atcgcgatga acctggtcct gggcgcgaac gtctgcgacg
     3661 tatggcgttg ccaatggaag atgaagcgct ggtactgttg ctgattgaaa agatgcgcga
     3721 aagcggcgac atcctcagtc atcacggctg gctgcatctg ccagatcaca aagcgggctt
     3781 cagcgaagag cagcaggcca tctggcaaaa agcagagccg ctgtttggtg acgagccgtg
     3841 gtgggtgcgt gacctggcaa aagagacggg aaccgacgag caggcaatgc gcctgacgct
     3901 acgccaggcg gcgcagcaag gaataattac cgcgatcgtc aaagatcgtt attaccgtaa
     3961 cgatcggatt gtcgagtttg ccaatatgat ccgcgatctc gatcaggaat gtggttcgac
     4021 ctgcgcggcg gatttccgcg atcgcttagg cgtaggccga aagctggcaa ttcagattct
     4081 ggaatatttt gaccgcattg gctttacgcg gcgtcgtgga aatgatcatt tattgcgcga
     4141 cgcattatta tttccggaaa aataaggaaa tgattaatta agttttaaaa taaattaata
     4201 caaaattctt atggatttaa aaaaagcaca ttgtttaatg aatacaatgt gctttttatt
     4261 agattaattt tgataatcaa taataatgat catgttttcg aatgaaaatc ctcagtaagc
     4321 tgcccaccct tttttacact ttcaggagtg tgttatggca tcttcaactt tctttattcc
     4381 ttctgtgaat gtcatcggcg ctgattcatt gactgatgca atgaatatga tggcagatta
     4441 tggatttacc cgtaccttaa ttgtcactga caatatgtta acgaaattag gtatggcggg
     4501 tgatgtgcaa aaagcactgg aagaacgcaa tatttttagc gttatttatg atggcaccca
     4561 acctaacccc accacggaaa acgtcgccgc aggtttgaaa ttacttaaag aaaataattg
     4621 cgatagcgtg atttccttag gcggtggttc tccacacgac tgcgcaaaag gtattgcgct
     4681 ggtggcagcc aatggcggcg atattcgcga ttacgaaggc gttgaccgct ctgcaaaacc
     4741 gcagctgccg atgatcgcca tcaacaccac tgcgggtacg gcctctgaaa tgacccgttt
     4801 ctgcatcatc actgacgaag cgcgtcatat caaaatggcg attgttgata aacatgtcac
     4861 tccgctgctt tctgtcaatg actcctctct gatgattggt atgccgaagt cactgaccgc
     4921 cgcaacgggt atggatgcct taacgcacgc tatcgaagcg tatgtttcta ttgccgccac
     4981 gccgatcact gacgcttgtg cactgaaagc cgtgaccatg attgccgaaa acctgccgtt
     5041 agccgttgaa gatggcagta atgcgaaagc gcgtgaagca atggcttatg cccagttcct
     5101 tgccggtatg gcgttcaata atgcttctct gggttatgtt catgcgatgg cgcaccagct
     5161 gggcggtttc tacaacctgc cacacggtgt atgtaacgcc gttctgctgc cccatgttca
     5221 ggtattcaac agcaaagtcg ccgctgcacg tctgcgtgac tgtgccgctg caatgggcgt
     5281 gaacgtgaca ggtaaaaacg acgcggaagg tgctgaagcc tgcattaacg ccatccgtga
     5341 actggcgaag aaagtggata tccgggcagg cctacgcgac ctgaacgtga aagaagaaga
     5401 tttcgcggtt ctggcgacta atgccctgaa agatgcctgt ggttttacta acccgatcca
     5461 ggcaactcac gaagaaattg tggcgattta tcgcgcagcg atgtaatccc cattctcctg
     5521 cggctggcgt gttgtcagcc gctatctcaa aattttcaat ttttgagata gtttttcttt
     5581 cctgctatac actatctcaa tattgcgctt ttttgagata agcaaatggc tatcaaatca
     5641 cctcccacgc tgattccttt atcacactta tcgggtgagg aactccaggc ccacctgcgc
     5701 tttaaccggg ttaccgatga aaaaggacgt tatctgcctt ttgatgagtt gcagtaccgc
     5761 atcaaaaaag gagaaaacgt cgaagtggcg tggacgctta cccgtctggc gcgcaacgcg
     5821 gcgatccaac gaatcaatta ttgcaatgaa gcgggtgagc aggccggatt caacattaca
     5881 ccagtgattg cagaagcgtg cgagcttgtc gacaaacatg ctaccgcgct ggcgctgaaa
     5941 gatcagactg aacggttacg cggggcgggc gccgagttaa gtcagttacg cctggaagag
     6001 ccgatcacca gctcccagct ggaaggtgcg aatactacaa cgctggtggc gagaaaaatg
     6061 ctggaaacag ggcggtcgcc acgcactgaa gacgagcata tgattgcggg aaatgcccgg
     6121 ctgatggcgg aaattccgca cttactcgca gaaccgctga cacctgcgct tattcgccag
     6181 ttacatgcca ttggtatggg tggaatcaat gacgcgaaat atcgtccggg agaatttcgt
     6241 gaaacagatg atgttgtgat cgccgactat gacggcaata tagtgcatca accgcccgct
     6301 gcgacattgt taccggaacg gctggaaaaa gtttgccagt ggttaaacag ccatgaaggg
     6361 tatattcacc cgttaatccg tgcctgcatt ctgcatttta tgctggccca tgaacatcca
     6421 tttcgcgatg gcaacgggcg caccagtcgg gcactgtttt actggtatat gctgaaatcg
     6481 ggctacgatg tctttaaata tatttccatc agccgtttgc ttcatgctgc accggtcaaa
     6541 tatgccgcca gctaccagta cactgaatca gatggtatgg atctgactta tttccttgaa
     6601 tatcaggccg gtgtcattaa acgcgctctg cataactggc agcagcatat tgatgaaatt
     6661 acacaacgaa gcgcaaaact cgatagtgtg ctgtttagct ctggtgtgct taaacgcctg
     6721 aatccgcgcc aggtaacgct cctgaatgtg atactcgcta atccggggaa agagtacaca
     6781 gttgctgaaa ttagcgcgag cctgggcgtc tctgataata cggctcgagc tgatttacgg
     6841 acgattgtta aagaagggtt tgcgcaagag aagaaaatta atgaccagca agccgtgtac
     6901 gtcgcacatt accagctgta gtccttgccc gtaaattcgt gatagccgtc gtaaagctgt
     6961 taccgactgg cgaagatttc gccagtcacg tctacccttg ttatacctca caccgcaagg
     7021 agacgatcat gaccaataat cccccttcag cacagattaa gcccggcgag tatggtttcc
     7081 ccctcaagtt aaaagcccgc tatgacaact ttattggcgg cgaatgggta gcccctgccg
     7141 acggcgagta ttaccagaat ctgacgccgg tgaccgggca gctgctgtgc gaagtggcgt
     7201 cttcgggcaa acgagacatc gatctggcgc tggatgctgc gcacaaagtg aaagataaat
     7261 gggcgcacat ctcggtgcag gatcgcgcgg cgattctgtt taagattgcc gatcgaatgg
     7321 aacaaaacct cgagctgtta gcgacagctg aaacctggga taacggtaaa cccattcgcg
     7381 aaaccagtgc tgcggatgta ccgctggcga ttgaccattt ccgctatttc gcctcgtgta
     7441 ttcgggcgca ggaaggtggg atcagtgaag ttgatagcga aaccgtggcc tatcatttcc
     7501 atgaaccgtt aggcgtggtg gggcagatta tcccgtggaa cttcccgctg ctgatggcga
     7561 gctggaaaat ggctcccgcg ctggcggcgg gcaactgtgt ggtgctgaaa cccgcacgtc
     7621 ttaccccgct ttctgtactg ctgctaatgg aaattgtcgg tgatttactg ccgccgggcg
     7681 tggtgaacgt ggtcaatggc gcaggtgggg aaattggcga atatctggcg acctcgaaac
     7741 gcatcgccaa agtggcgttt accggctcaa cggaagtggg ccaacaaatt atgcaatacg
     7801 caacgcaaaa cattattccg gtgacgctgg agttgggcgg taagtcgcca aatatcttct
     7861 ttgctgatgt gatggatgaa gaagatgcct ttttcgataa agcgctggaa ggctttgcac
     7921 tgtttgcctt taaccagggc gaagtttgca cctgtccgag tcgtgcctta gtgcaggagt
     7981 caatctacga acgctttatg gaacgcgcca tccgccgtgt cgaaagcatt cgcagcggta
     8041 acccactcga cagcgtgacg caaatggggg cgcaggtttc tcacgggcaa ctggaaacca
     8101 tcctcaacta cattgatatc ggtaaaaaag agggcgcaga cgtgctcact ggcgggcggc
     8161 gcaagctgct ggaaggtgaa ctgaaagacg gctactacct cgaaccgacg attctgtttg
     8221 gtcagaacaa tatgcgggtg ttccaggaag agatttttgg cccggtgctg gcggtgacca
     8281 ccttcaaaac gatggaagaa gcgctggagc tggcgaacga tacgcaatat ggcctgggcg
     8341 caggcgtctg gagccgcaac ggtaatctgg cctataagat ggggcgcggc attcaggccg
     8401 ggcgcgtgtg gaccaactgt tatcacgctt acccggcaca tgcggcgttt ggcggctaca
     8461 aacaatcagg cattggacgc gaaacccaca agatgatgct tgagcattac cagcaaacca
     8521 agtgcctgct ggtgagctac tcagataaac cgttggggct gttctgatat aagaagctgg
     8581 ttgcattggg tattcattgc ctgatgcgac gcttacgcgt cttatcatgc ctacggggac
     8641 ctgaccgtag gccggataag gcgtacacgc cgcatccggc ataaacaaag cgcacgttgt
     8701 tacaatttac gttttaaacc tacgtgtgca ataacccaga ctacgccaac aaaagtgcgt
     8761 ttctggggcg tgttttgcca ggagtttaat ctcgcgtttc gatggtgagc gggcaaacca
     8821 gaccgtaaat caccattggt attccgagga caatcagcaa taaatggtag attattgaag
     8881 gtttaatacg cttaatctgc attgtggatg ttttacggtt tttaatcata aatttggcca
     8941 atagttccat tatttcaata tgataagcct cgacctgtta aaaagccagg cagcacactt
     9001 caggaagtat ataaaaaaca atatgtcgtt atataaataa ggaaattgca ctgcatcatg
     9061 gcatttcata atatgcgttt attgttcttt tttatattct ctgagggaaa tatgttcctg
     9121 gactattttg cattgggagt acttattttt gtatttctgg tgatattcta tgggattatt
     9181 attttacatg atattcccta cctgattgct aaaaaacgta atcatcctca tgccgacgcc
     9241 attcatgttg ctggttgggt gagtcttttt acgctgcatg ttatctggcc atttttgtgg
     9301 atttgggcca cgctttaccg cccggagcgg ggatggggaa tgcaaaacca tgactcctcc
     9361 gttgtgcagc tacaacagcg tattgccggg ctggagaaac agctcgccga catcaaatcc
     9421 tcttctgccg agtaatactt atggatttac tgattatttt gacctatgtg gctttcgcat
     9481 gggcaatgtt taagatcttc aaaattcctg taaataaatg gaccattccc acagcggccc
     9541 tgggtggcat atttattgtc agcggtttaa ttctgttaat gaactataac catccgtata
     9601 cctttaaagc gcaaaaagcg gttatttcta ttcctgttgt tccacaggtg acaggcgtgg
     9661 tgattgaagt gacggataag aaaaatacgc tgattaaaaa aggcgaggtg ctttttcgac
     9721 tggacccgac gcgttatcag gcgcgggtgg atcggctgat ggcggatatc gttaccgcag
     9781 aaaataaaca gcgggcgttg ggcgcagagt tagatgagat ggcggcgaat acacagcagg
     9841 caaaggccac gcgggataaa ttcgctaaag agtatcagcg ttactcacgc ggcagccagg
     9901 cgaaagtaaa cccgttttca gaacgcgata tcgatgtggc gcggcaaaat tatctggcgc
     9961 aggaagcctc cgtgaagtca tcagcggcgg aacaaaaaca gatccagagc cagctggata
    10021 gcctggtgtt gggtgaacat tctcaaatcg ccagcctgaa agcgcagctc gcggaagcaa
    10081 aatataacct tgagcagacg atagtacgtg caccgagcga tggttatgtg acccaggtcc
    10141 tgattcgtcc gggtacctat gccgcgtcgc tgccgctacg tccggtgatg gtgtttatac
    10201 ccgatcagaa acgacaaatc gtggcgcagt tccgtcagaa ctccttgctg cgcctggctc
    10261 ccggcgatga tgcggaagtg gtatttaacg ctctgccagg caaagtgttc agcggtaagc
    10321 tggcagccat tagtccagct gttcccggcg gagcttatca gtcgaccggc accttacaga
    10381 cgttaaacac agcgccgggt tcagatggcg ttatcgcgac cattgaactg gatgagcaca
    10441 ctgatttgag cgctttacca gatggtattt acgcccaggt ggcggtctac tctgatcatt
    10501 tcagccatgt ctcggtgatg cgcaaagtgc tattacgcat gaccagctgg gtgcattacc
    10561 tttatcttga tcattaatct tcgctttccg ctgcttgttc aggccgcaat tgctgcgact
    10621 gagcaagctg gtggcgaatt tcacgcagca tttcatccag cacatactgg acccgccagg
    10681 gctggtattc ccgtttacgg aagatagcca ccagatccag ccaccattca tacgggtgct
    10741 gaaagcaggg caccagcgtg ccgtcttgca ggtcgctctg cacacttttg tctggcgcaa
    10801 acacaatccc caggtgattt cgtgccagct ccagcgccga ttgcgtgttg tcgcaaacgt
    10861 aatttccctt cacgcgataa tcccgcacct ctttactccc agcgacgttg aagcgccaga
    10921 tattcgcgtc gtcgatcatc atcgagtcga tcaaaataca ggagtgatgt tcgagttcgt
    10981 caggacggct aatgggatgt ttctcaagat agcgctggct ggcataagcg gttacggcat
    11041 attgggtaat aaaactggca accagcgatt catcttttgg tggggcatag ctgattaaaa
    11101 catcacaatc atcaggaaat tcgacgcctt cataaaaggc attacgctca agattgcagg
    11161 tttttagcga taaggtgata tcaccgatat ctttaatttt atcgattaca tgtttggata
    11221 aataggtaat tatgccggtt ggggcgtaga tggtgacccg accacgtttc tcatgcttat
    11281 aatctgcaat aaaattatta agctgctcgt ttctgtccag catgtcgttg atgtacggta
    11341 acagcgcggt gccaaaaggt gtgagcatca gttgtcgggt ggttcggtca aaaactttta
    11401 aacccacttt tgattcaaaa tcagcaagat atttgctgac gttggcctgt gcgatgccaa
    11461 gtacagtcgc ggcatggctg atattttcac tggcagcgat taccgagata atttttaact
    11521 cccggtactt aagttgtaat tttgtcatcg caacagccca attatatata attttatata
    11581 ttactatata aatatgaatc ttgcaccgga gaaattgtaa gcattactat gccgactctt
    11641 ttttatctta ttttaaaatg gaataccgga catgttaatt aaccgcaata ttgtggcgtt
    11701 atttgcgttg ccttttatgg caagcgcaac tgcttctgaa ttatccattg gtgctggtgc
    11761 ggcttataat gaatcgcctt atcgcggtta taatgaaaat acaaaggcaa ttccgctgat
    11821 tagctatgaa ggtgatactt tttatgttcg tcagaccacg ttaggtttta ttctgtcgca
    11881 aagtgaaaaa aatgaactta gcctgaccgc atcctggatg ccgctggaat ttgaccctac
    11941 cgataatgac gattatgcca tgcaacagct tgataagcgt gatagtacgg ctatggcggg
    12001 ggttgcctgg tatcaccacg agcgttgggg aaccgtgaaa gcctctgcag ctgcggacgt
    12061 tctggataac agcaacggct gggtggggga gctatcggta ttccacaaaa tgcagatagg
    12121 tcgtctgtcg ctgacacctg cgctgggcgt tctctattat gacgagaatt tcagtgacta
    12181 ttactatggc atttcagaga gtgagtcccg tcgtagcggt ctggcaagtt attccgcgca
    12241 ggatgcctgg gtgccctatg tcagcctgac ggcaaaatac ccgataggag agcacgtcgt
    12301 attgatgacg agcgcaggat acagcgagct gccggaagag attaccgaca gcccgatgat
    12361 tgatcgtaat gagagtttta cctttgtcac cggcgtgagc tggcgttttt aattcaccgg
    12421 tggatatcgg tgcggctggc ctacgctctc gcaccgactc gcgggcctga taagacgcgt
    12481 taagcgttgc atcaggcaat gtgctcccta cgttggatgc ggcgcgagtg ccttatccaa
    12541 cctacggatg gcaatgcttt tcctcattca cccagatccg catttcgcct tcaccccggt
    12601 tggcccagct aaaccacggg ataaaggtca gagtttgcgt ctggcgtttg gctggcgcgc
    12661 tgtcgtaatg ccacagcggt tgctgctctg gattgctctg atcataccgg taacccggtg
    12721 cctggattaa gatcttatgg cggaacaatc cattaccttc aaatgtcgta aatggcgcat
    12781 cggcgggtag ccacagatta tgcagtgact cgccattgtc ggcctgttcc aggcaataca
    12841 ccagcgggcc gcgctgaatc gccacttttc cggcgacgtg acgcaccagc gggttaccgt
    12901 aaacgcggcg taccggcatc gacaaagtca gattcagcgt atcgccctcc tgccattcgc
    12961 gggtaatgtg caaataccct ttacgaatat cctgctcgac ctcttcccca ttcaatatga
    13021 tctgcggctg tgtgcaccag tccggcagac gtaaagccag cgtatgacgt accggctggg
    13081 gcgattcaac cgcaattgtc acctgctcct gccacggata gttcccgcta acccgcaggc
    13141 gcagcgtgcc attttctacc ggcacttcca tgctgtttcc tgcgtatatg ttgatataca
    13201 acgcatcttc acgcggcgtg tagagataat gaccaatcga ggtcagcacg cgggcgatat
    13261 ttggtggaca acaagcgcag ccaaaccaac gctggcggat cggtttaacg tgatcgtaga
    13321 tatggttgaa tttcagcgat tttggatgta cttccagcgg attcacatag aagaaatgtt
    13381 tgccatccag cgccatgccg ccgagcacgg tgttgtacag cgcgcgctcc atcacatcgg
    13441 catattgact gtcgccttcc atttccagca ttcgccgggc gaacatcatc aggccgatgg
    13501 aagcacaact ttcggcgtaa accgtgtcat tcggcagatc gtaatcgcta gtgaacgctt
    13561 cgccgctgct ttgcgagcca atgccgccgg taatatataa ctgacgctgg gccatattgt
    13621 tccacagcct caggcagtcc tgacgcttgc tgtcatcgtg acttaaacgc gcgagatgtg
    13681 cgacgccggt catcaggtag acaaaacgta ccgcgtgacc gatggcggtt tgctgttgcg
    13741 caaggggcaa atgtgcctgg ctgtaggctt tgtctttcac catccacgcc gggccgtagg
    13801 tgtgccagtg cgaggtctgc ccgcgctttt catattcctg gtcgtaatag tgcggttgcg
    13861 caccacgctg ttcgacaaaa tagttcgtca gcgccaggta gcgcggctct tcggtgactt
    13921 cgtagagacg catcagcgcc agttcaattt ccggatgacc gggataaccc tgcagcttgt
    13981 cttcatctgg accaaatacg cggtcgatat gatcggccag acggcaaacc acctccagca
    14041 agcgtcgttt tcccgtggcc tggaagaagg cgactccagc ttcaatcaga tgacctgcgc
    14101 agtaaagttc atgacactcc gccagattgc tccagcgttc ttcgggtgct tttaccgtaa
    14161 agtaagtatt gagatagccg tcttcgcatt gggcggaggc gatcagttcg attacctcgt
    14221 cggcggtttt ttccagttcg gcgtccggct tctggcacag cgaccaggct accgcttcca
    14281 gccatttggc gacgtcgctg tcctgaaaca ccatcccgta aaattcaccc tcctgaagtc
    14341 cggcggcaat gcgaaagttt tcaatcgcat ggctgggttc cgcttctggg atacgatcgt
    14401 tcaaggcatc ccactgataa gaaatcacca cgtcgcggac cagttgttgg tactgaccga
    14461 ggaacggatc gctgaccgtc agtttacgca gatcgacttc cgaaatgttc atcttgtgct
    14521 ccttaaggct gtacatgacg ctgacgcagg tcggtagcta tgcgcgacat cataggatta
    14581 ttgagtttgc aaaagcggat cgcccctgcc agcagcaggt ggaatagcgc aggcagcaat
    14641 gtttccatcg ccgtgatccc gccaagcgaa ctggcggtct ggttttccac gccaggctgg
    14701 taggcgacaa aaataaacag caggctgatg atcccggcgc tggaggccca ggccagcttg
    14761 atgaaaaaca gattgaaggc gaagttcatg ccggaagaac gtacgcgggt tttccactcg
    14821 ccgtagtcat cggcaaaggc catcaatgag aagtgcaatg gcaatgtgaa gccaagaatc
    14881 acgccattac cgaggatcac cgccagccac agcgtttgat aagccgggcc ggagggcagg
    14941 aaccacatca acaccgccag tgcagcgagg agcaggttgg tgtagtaata aattttgacg
    15001 gtatcgaaac gccgcgttaa cgggctgaca atcaccgagc cgataatgga ggcgaaggtg
    15061 accatggtga agaacagcga cgtgtagccc gtactgcctt gtaagacgta ggtaatgaag
    15121 tacatatacc caccgccgcg aatattaaag acgttaatca gcaggaaaga catgaccagc
    15181 atcagcagca gttggtcgtt gttccgcagc ccggcaagat gttcgcgcag ggtaaatttc
    15241 cccattgtgg agagcggcac ccgttcacga acccagaaaa aacagcacag gaacatcacc
    15301 acggcaatgg cgcacaatac gccgacgccc agttgatagc cgcgtgcagc gttgccctga
    15361 ccgaagcgat ctaccatcca cggtaagcct accgaaacca gaaatcccgc tacgccgcag
    15421 agaacgaatc gccaggactg gcaggagatc acttcattgt ggcgggtggt catggtgttg
    15481 atcagcgcgc agtacggtac gttgatggcg gtataaccga ctgaaaggag caggtaagta
    15541 ccgaacgccc aggcgatttt tactcccatg ctggcatctg gcacggtgaa cgtcaggatg
    15601 ccgataatgc cgatgggaat ggcaatccat agctgccacg gacgaaagcg cccccatcgg
    15661 ctttgcgtcc ggtcggcaat gacgcccatc accgggtcgg agatggcatc aaacacgcgc
    15721 agtgcaataa acagcgtgcc aaccagcgcc ggagttaatc caaaaacgtc ggtgtagaaa
    15781 aaggtgagaa aattcatgat caggcaagtt attacggtgc cgcctgcgtc acccaggccg
    15841 tagcctattt tttcccgtac agataacgca tcgtcaattt taccgttagc gatatcagcg
    15901 gtagtaatcg gtgtagaggt catagatatt cctcgtgaat agggagcaat ttttagtttt
    15961 attgaaatga cctgattaat tctgccgtga acgggaatat caacaaggcg agaaaagagt
    16021 aaaaaaaggt gacgattccg acctgaattt aaaagtgtga aatggatcag gtgaaattaa
    16081 tgtttttgat taataatcaa aaggtaatgt gtttaatcat taatgaataa gcgggaaatt
    16141 acatatcaat gctcgaatta tccatgacgt taccgattaa agtgcaaaat ggtggattat
    16201 ttatttcccg cggcgtaggg aggcatcctg caaggcggct ggagtcatgg gaaattatct
    16261 ttgtcgaaaa aggtcgatta acgattcagg cagaagaacg gatatttctg gtcgatgcgg
    16321 gagagagttt attactctgg ccgaatcgac aacatgttgg ggtggaggat tttcccgccg
    16381 atctcaaatt ttactggctg cattttgagg ttaaagcgcc ggatagcgac ccgcgctggc
    16441 tcactcatct tagcgtgccg caacaaacga aggttgccga tccgcaggcg ctggtggccc
    16501 tgtttcgcca gttcttaagc gaacaggaaa agcatcaacg cactccggcg ctggagttta
    16561 ttgtgctgct gattttgcag cagctcaccc gtgacgcgcg tcttgatgaa caggccgatg
    16621 gcgcaggcac cacccttgcc tggaaagcgc agaaactgag tccgcacgca atatcatcgc
    16681 ccgctttcta cggcgcttct ggcccgcgag ctgtactgca atgccgatta tcttgggcgc
    16741 gtctaccggc gggtgtttca tctgacgtta acagaagcaa tccatcgcca gtgagtgcgc
    16801 gaagccgaaa agctgttaat tagcgaagcg cgatcgctca ctgaagtggc tgcgttgtgc
    16861 gggtttaatg acgttggcta tttccggcag atttttcaga aacatactgg tttaacgcca
    16921 gcagcgtgga agcggcgtta cagcaaggaa catatcaatt cgtagtgccg gggcgatgaa
    16981 gccccggcgt gagggattac tgcccgtaat aggcattggc cccatgctta cgcaggtagt
    17041 gcttatccag cagttcgttt tgcatcgcag ggagctgcgg cgcaagctgg cgcgagaata
    17101 ggcccatata ggcgcattct tcgagtacta cggcgttatg cacagcatcg gcggcgtttt
    17161 taccccatgc gaacgggccg tgagaatgca ccagcaccgc cgggatttgt gccggactcc
    17221 tgccacgttc ttcgaaggtt tcaatgatca cttcgccggt ctgatattca tattcgccgt
    17281 taatctcctc tgcggtcatc tgtcgcgtgc aggggatggc accatagaaa taatcagcgt
    17341 gcgtggtgcc ccaggcgggg agatccagcc cggcctgcga ccagatggtg gcgtggcgcg
    17401 agtgggtatg cacaatgcca ccgatttcgg cgtagcgacg gtaaagcgcc agatgcgttg
    17461 gcgtgtcgga cgagggcttt ttgctacctt ccaccacctt gccgctggct atctcaacca
    17521 ccaccatatc gtcggcggtc atcacgtcat actcgacgcc ggaaggtttg attaccatcc
    17581 attgccgcgt ttcgtctacc gcgctgacat tgccccaggt gaacgtcacc agatggtgag
    17641 cgggaagcgc cagattcgcc gccagcacgt cggctttcag ttgctctaac atataaatcc
    17701 agcctcctgc atacgcgctt caatccaacg ccgcgcctga ataatctcca gcaccggctc
    17761 tttggctttt tcggtccaca tctcaatcag gaaagaaccg cgatagttca gttgatgcag
    17821 cgttttgaag atgccaacga aatcgacgca gccttcgcca aacggcacat cacggaactg
    17881 tccgggactt tgctcggtga ctggctgggt gtctttcagg tggatggcgg cgatacggtc
    17941 aatgctcagt ttcagttcgg cgggaacatc attgccccag gcgctgaggt tgccgacgtc
    18001 cggatagacg gtgaaccacg gcgaggcgag catttcgtcc cactttttcc atttgctgat
    18061 ggagttcata aacgcggtat ccataatctc caccgccagc attacttgtg atgccgccgc
    18121 ctgttcgact gcccacgcca gcccttcagc aaaacgttgc tgggtgcctt cgtcgtggtc
    18181 ttcgtaatag acgtcgtaac ctgccagctg gatggtgcga ataccgagat cgcgcgccag
    18241 gcgaattgct ttactcatga tctcccgcgc tcgttcgcgc accgcttcgt cccggctgcc
    18301 aaaagggaaa cggcgatggg cagacaggca cattgatgga atggcaacac ccgcttcaat
    18361 catcgcagtg accagcgaag cacgttgtgc ggcgctccag tcaagacgtg agagccgttc
    18421 gtcggtttca tccaccgaca tttcgacaaa atcaaaaccg cagctttttg ccagcaccag
    18481 ccgctccggc caggagagat ctttcgccag cgccttttca taaatcccta acggatgatt
    18541 acgcacgcgc acctccccag atagcgtcga tttgcgcatg gaaatcggca gccacctgta
    18601 ccggatttgc cgcgcctgcc agtgctcgcc cggcaataaa cgctttcacg cggatatctt
    18661 taaacagcgg caggtcagca ggagtaatcc cgccggtaat ggaaagttca agaccgatat
    18721 cagaaagcgc cttcatgcgt gccagatcgg cctcgcccca ctgttgcccg ctggcctgtg
    18781 catcacgacc acgatgataa atggcctgcc gcacgccaat acgatgccag tcgcgggcgt
    18841 cgtccagcgt ccagttaccg aacagctcta tctgaatttc accaccgcag cgttgtgcca
    18901 tcgcgtggcc tttttccacc gtcgcgagcg gtgcggcgca gatgatggtc atccagttag
    18961 cgccagcgcc aaacgcctgt tgcgcgagcg tttcaccagc gtcggcgacc ttccagtcag
    19021 caacgatgat tttgtccggg cactgttcgc gcaaggcttt caccgcgcca agcccttcgt
    19081 ttaaacagag aatggtgccc gcttcgacaa tatcgacgct gtcttttaat agcgtcacgt
    19141 cgcgctgcgc ggcttcaagt gatgagtggt cgagggccag ttgcagaagt ggtcggctca
    19201 taatgtgtgc tccttgatgc gggcgtgaaa gccctgaagt gcggcaatga gatgctgata
    19261 gcgttggtat ttttgttggt aaagctgatg ggcggtcata tccggcagca gggtgcgcac
    19321 cgggtgctgc aagtcacgtt gagcttcgct gaagttgcga taaactccgg tgccgacgcg
    19381 ggcggcaagt gccgcaccaa agcagccggt ttcttccacc tgcggcagct cgatacgcag
    19441 accgctgacg tccgccagca tttgcatcca gacatcggag tgcgccgggc cgccagtgac
    19501 gcgcagggtg tgcacatcag taaaacgttc gcgcatccgg ttgagatggg tcatatggct
    19561 gaacaccacg ccttcataaa ttgcctgcaa caggtgtgcg cgggtgtgaa tggcctgcat
    19621 cccgtagaaa ccgctggtca tctcgagtcc ggcgttgctg ccgtacagga acggcaggaa
    19681 aaagagatcg ccaccggcct tcggcaagct ggcaacggcc tgattgatct catcaaacga
    19741 gatttctccc cactgcgcgg taaaccattc gaggttgccg gaagaggtag ggctggcttc
    19801 gtgaacgata aattgaccat cgttaacgta gcgaccatag acatacggat gcgcttcacc
    19861 gtcacgtaaa ccgcgggtta tgccgctggt caccgcccag gtgcccatca ctgcgttgag
    19921 ggtgaattcg tcttcgatcc cggcgcagag tgcggtggaa accacatcaa acaggccgcc
    19981 gactacgggc gtacccgctt tcagaccggt cagtgcggct gtctgagcgg tgatctcccc
    20041 gcagatttcg gcagatccga caacaggcgg cagggcgtgg ttgatttcag cgatccccag
    20101 ccagtcggtg agactcgggt catatttccc gcgactcatg ttgtagaggt tggactcgga
    20161 aatattgctc tcttcacagc ctttgacgcc agttaaacac cagcgcaggt agtcgtgcgt
    20221 catcatcacg cagccaattt gcgcgtagcg ttctggttcg tgctctttca gccagcgtaa
    20281 cagcgacacc ggatgcccgg tccacaaggt ttgtcgggtc aacgggtaga gtttttccgg
    20341 gatgccatct tcctgccagc gacgaacgat ttccatcgcc cggcgatccg aggacaaaat
    20401 ggcgttaccg agcggcttgt tgtttttatc cagcaaaaac aagccttttc cttgtgcgga
    20461 aataccgata cccactattt gctccccgct aacgccggaa tgggtaagca gggcgcgaat
    20521 gacagccatg cagcattgcc acagttctgc catatcgcgc tctgcccagc ttggctgcgg
    20581 gcttaatgcg cacagcggca ggcgctgcac gcctgcctcc cggccttcgc ggtcatacag
    20641 tccggctttc agccagctac cgccacaatc taaccccagc cagtattgcg tcatggttta
    20701 ttgcacctca tccacggctt tcagcagctc agcgccctgc ggaacatctt taacaaacat
    20761 gtcgcggacc tgagtaccca gtgcgtcgct aaaggctttg cggtcgagat cggtgatgac
    20821 ttccacgccc gcttctttca tgccgtcgag cgttttatgc gcgtgagcgg tatcgcggaa
    20881 caggaaaggg acatcgagca agttcatcac tggtgataac ccggcaaagt tattcgagcc
    20941 ggacatttcc atatcgatgg tgccgccacg tacgccgctg atcatcgcct gcgcgttacc
    21001 gagggtgcta tccggaaaca attttaattt cagttcgcct ttggtttttt cctgtaataa
    21061 ttcattgaat tttttcgccg caatatgttg cgagtcggtt tgtgatgtct cataaccgaa
    21121 acgtaatgat tgtgccgcca gagaagatgt gctgaatgca gccaggccag caatgaataa
    21181 tgcgtaggtt acagagcgta atttcataat attttccttt taattaatcc atttcaaagg
    21241 gaggatgatg agatcgggaa taaaaacaaa tacgactaat aaggaatata aaacgaggac
    21301 gtaagggaaa acgcctctga ctgcatcatc gaatttgagt tttgccaccc ctgaaataac
    21361 gttaagcaca ttaccgatag gcggtgtaat taagccgatt gagcagttaa tgataaacat
    21421 gacaccgaaa taaatcggat cgattcctgc ctctt
//
LOCUS       DAJVTL010000071        21436 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.071, whole genome shotgun sequence.
ACCESSION   DAJVTL010000071 DAJVTL010000000
VERSION     DAJVTL010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21436
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.071"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..212)
                     /locus_tag="OQQ26_002534"
     CDS             complement(<1..212)
                     /locus_tag="OQQ26_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HCS1857955.1"
                     /translation="MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKF
                     RASGQPVFLVHVGWSADYAEALKQPV"
     gene            522..2294
                     /gene="aspS"
                     /locus_tag="OQQ26_002535"
     CDS             522..2294
                     /gene="aspS"
                     /locus_tag="OQQ26_002535"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HCS1857956.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
                     NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
                     DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
                     FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
                     EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANPTALAELSIQVVKKAENN"
     gene            2412..2864
                     /gene="nudB"
                     /locus_tag="OQQ26_002536"
     CDS             2412..2864
                     /gene="nudB"
                     /locus_tag="OQQ26_002536"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HCS1857957.1"
                     /translation="MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE
                     EGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESW
                     FCLALPHERQVVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA"
     gene            2893..3633
                     /locus_tag="OQQ26_002537"
     CDS             2893..3633
                     /locus_tag="OQQ26_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCS1857958.1"
                     /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEASGLKADSAEVSMIPSTKADMDAETAPKLMR
                     LIDMLEDCDDVQEVYHNGEISDEVAATL"
     gene            3668..4189
                     /gene="ruvC"
                     /locus_tag="OQQ26_002538"
     CDS             3668..4189
                     /gene="ruvC"
                     /locus_tag="OQQ26_002538"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HCS1857959.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPFR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
     gene            complement(4191..4793)
                     /locus_tag="OQQ26_002539"
     CDS             complement(4191..4793)
                     /locus_tag="OQQ26_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416376.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebB family permuted papain-like enzyme"
                     /protein_id="HCS1857960.1"
                     /translation="MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGH
                     NGEDFLVAESRVPLSTITTLSRFIKRSANQRYAIKRLDAGLTEQQKQRIVEQVPSRLR
                     KLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGQLLNSNPNAKLTFWKFWFL
                     GSIPWERKTVTPASLWHHPGLVLIQAEGVETPQPELTEAV"
     gene            4864..4929
                     /gene="yobI"
                     /locus_tag="OQQ26_002540"
     CDS             4864..4929
                     /gene="yobI"
                     /locus_tag="OQQ26_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response small protein YobI"
                     /protein_id="HCS1857961.1"
                     /translation="MYIFITHFFTEYVIFKYLLPI"
     gene            5068..5679
                     /gene="ruvA"
                     /locus_tag="OQQ26_002541"
     CDS             5068..5679
                     /gene="ruvA"
                     /locus_tag="OQQ26_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HCS1857962.1"
                     /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYVLPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL"
     gene            5688..6698
                     /gene="ruvB"
                     /locus_tag="OQQ26_002542"
     CDS             5688..6698
                     /gene="ruvB"
                     /locus_tag="OQQ26_002542"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HCS1857963.1"
                     /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
                     IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
                     MP"
     gene            complement(6845..7630)
                     /gene="znuB"
                     /locus_tag="OQQ26_002543"
     CDS             complement(6845..7630)
                     /gene="znuB"
                     /locus_tag="OQQ26_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HCS1857964.1"
                     /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVS
                     LMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFI
                     DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     LVGMVAVTGGLTFSAFYDTPAGPSVVLCAALLFIISMMKKQAS"
     gene            complement(7627..8382)
                     /gene="znuC"
                     /locus_tag="OQQ26_002544"
     CDS             complement(7627..8382)
                     /gene="znuC"
                     /locus_tag="OQQ26_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HCS1857965.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
                     TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
                     PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
                     DLIDQLRHELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRENDRS"
     gene            8461..9393
                     /gene="znuA"
                     /locus_tag="OQQ26_002545"
     CDS             8461..9393
                     /gene="znuA"
                     /locus_tag="OQQ26_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HCS1857966.1"
                     /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD
                     GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQV
                     TIAQLEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHG
                     KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG
                     LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG
                     TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD"
     gene            9409..10731
                     /gene="mepM"
                     /locus_tag="OQQ26_002546"
     CDS             9409..10731
                     /gene="mepM"
                     /locus_tag="OQQ26_002546"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HCS1857967.1"
                     /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
                     ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
                     GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
                     TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
                     WQMNFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
                     GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
                     VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
                     HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
     gene            10851..11822
                     /gene="lpxM"
                     /locus_tag="OQQ26_002547"
                     /gene_synonym="msbB"
     CDS             10851..11822
                     /gene="lpxM"
                     /locus_tag="OQQ26_002547"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416369.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HCS1857968.1"
                     /translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFR
                     DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
                     LAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
                     IARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK"
     gene            complement(11953..13395)
                     /gene="pyk"
                     /locus_tag="OQQ26_002548"
     CDS             complement(11953..13395)
                     /gene="pyk"
                     /locus_tag="OQQ26_002548"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HCS1857969.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCSQNAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY
                     LMSGDLVIVTQGDVMSTVDSTNTTRILTVE"
     gene            complement(13523..14380)
                     /gene="hexR"
                     /locus_tag="OQQ26_002549"
                     /gene_synonym="yebK"
     CDS             complement(13523..14380)
                     /gene="hexR"
                     /locus_tag="OQQ26_002549"
                     /gene_synonym="yebK"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HCS1857970.1"
                     /translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEA
                     NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA
                     MATLDHVRHSLDKSAINHAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS
                     DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE
                     ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKESRFDK
                     QLLNLSDDR"
     gene            14717..16192
                     /gene="zwf"
                     /locus_tag="OQQ26_002550"
     CDS             14717..16192
                     /gene="zwf"
                     /locus_tag="OQQ26_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HCS1857971.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR
                     IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
                     GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
                     DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            16427..18238
                     /gene="edd"
                     /locus_tag="OQQ26_002551"
     CDS             16427..18238
                     /gene="edd"
                     /locus_tag="OQQ26_002551"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HCS1857972.1"
                     /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
                     PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA
                     RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLFRYTLEPWLNNGEL
                     DWREGAEKSLDRNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
                     FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
                     PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
     gene            18275..18916
                     /gene="kdgA"
                     /locus_tag="OQQ26_002552"
                     /gene_synonym="eda"
     CDS             18275..18916
                     /gene="kdgA"
                     /locus_tag="OQQ26_002552"
                     /gene_synonym="eda"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HCS1857973.1"
                     /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
                     EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGGQFAISPGLTEPLLK
                     AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
                     TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
     gene            complement(18972..20150)
                     /gene="purT"
                     /locus_tag="OQQ26_002553"
     CDS             complement(18972..20150)
                     /gene="purT"
                     /locus_tag="OQQ26_002553"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HCS1857974.1"
                     /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
                     ADAPAMHVAHRSHVINMLDGDALRRVVKLEKPHYIVPEIEAIATDMLIQLEEEGLNVV
                     PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREVVAAIGYPCIVKPVMSS
                     SGKGQTFIRSAEQLAQAWEYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSEN
                     VTFDNVQNAVGAGLQIRLFGKPEIDGSRRLGVALATAESVDDAIERAKHAAGQVKVQG
                     "
     gene            20284..20574
                     /gene="yebG"
                     /locus_tag="OQQ26_002554"
     CDS             20284..20574
                     /gene="yebG"
                     /locus_tag="OQQ26_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein YebG"
                     /protein_id="HCS1857975.1"
                     /translation="MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTN
                     SPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA"
     gene            20641..20997
                     /locus_tag="OQQ26_002555"
     CDS             20641..20997
                     /locus_tag="OQQ26_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310584.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YebF"
                     /protein_id="HCS1857976.1"
                     /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
                     ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
                     QVSVDCKAGMAEYQRR"
BASE COUNT         5420 a         5302 c         5638 g         5076 t
ORIGIN      
        1 tcaaccggct gttttaatgc ttcggcgtaa tcggcagacc agccaacgtg caccagaaac
       61 acgggctgac cgctggcgcg aaatttcgcc gccagcttcc cggcgcgatt aactacctca
      121 tcggcagtat gtggaccacc ggcaaaaggt aagatgcctt cttgtaaatc gatcaccacc
      181 aacgcagtgg ttttagcatt aagttcaagc atgctgactc ttgaaaaaac aaaatcgtgc
      241 ctcacacctt aatgcgatta gccgatggcg gaacgacaaa ttttgttaat ttttatgagt
      301 tcgggcaaca cctttatagc aaactggcgt agagtctgat ttcaggcccg atataaagtg
      361 gtaacgaggc gttccagcgc gggccaggct cttacggtgc ggcagaattt ccagtataat
      421 agccgccttt tttcattcag ttgtgacata cagctaacgc tgcgacttgg tcacctgcgc
      481 agcagggggc atccgccggc agctaagtta agggatatct catgcgtaca gaatattgtg
      541 gacagctccg tttgtcccac gtggggcagc aggtgactct gtgtggttgg gtcaaccgtc
      601 gtcgtgatct tggtagcctg atcttcatcg atatgcgcga ccgcgaaggt atcgtgcagg
      661 tatttttcga tccggatcgt gcggacgcgt taaagctggc ctctgaactg cgtaatgagt
      721 tctgcattca ggtcacgggc accgtacgtg cgcgtgacga aaaaaatatt aaccgcgata
      781 tggcgaccgg cgaaatcgaa gtgctggcgt cctcgctgac tatcatcaac cgcgcagatg
      841 ttctgccgct tgactctaac cacgtcaaca ccgaagaagc gcgtctgaaa taccgctacc
      901 ttgacctgcg tcgtccggaa atggctcagc gcctgaaaac ccgcgctaaa attaccagcc
      961 tggtgcgccg ttttatggat gaccatggct tcctcgacat cgaaaccccg atgctgacca
     1021 aagccacgcc ggaaggcgcg cgtgactacc tggtgccttc tcgtgtgcac aaaggtaaat
     1081 tctacgcact gccgcaatcc ccgcagttgt tcaaacagct gctgatgatg tccggctttg
     1141 accgttacta tcagatcgtt aaatgcttcc gtgacgaaga cctgcgcgct gatcgtcagc
     1201 ctgaatttac tcagatcgat gtggaaactt ctttcatgac cgcgccgcaa gtgcgtgaag
     1261 tgatggaagc gctggtgcgt catctgtggc tggaagtgaa gggcgtggat ctgggcgatt
     1321 tcccggtaat gacctttgca gaagcagaac gccgttatgg ttctgataaa ccggatctgc
     1381 gtaacccgat ggaactgacc gacgttgccg atctgctgaa atctgttgag tttgcagtat
     1441 ttgcaggtcc ggcgaacgat ccgaaaggtc gcgtagcggc tctgcgcgtt ccgggcggcg
     1501 catcgctgac ccgtaaacag atcgacgaat acggtaactt cgttaaaatc tacggcgcga
     1561 aaggtctggc ttacattaaa gttaacgagc gcgcgaaagg tctggaaggt atcaacagcc
     1621 cggtagcgaa gttccttaat gcagaaatca tcgaagccat cctggatcgt actgccgcgc
     1681 aagatggcga tatgattttc ttcggtgccg acaataagaa aattgttgcc gacgcgatgg
     1741 gcgcattgcg cctgaaagtg ggtaaagacc ttggtctgac cgatgaaagc aaatgggcac
     1801 cgctgtgggt tatcgatttc ccgatgtttg aagacgacgg tgaaggcggc ctgacggcaa
     1861 tgcaccatcc gttcacctca ccgaaagaca tgacggctgc agagctgaaa gctgcaccgg
     1921 aaaatgcggt ggcgaacgct tacgatatgg tcatcaatgg ttacgaagtg ggcggtggtt
     1981 cagtacgtat ccataatggt gatatgcagc agacggtgtt tggtattctg ggtatcaacg
     2041 aagaggaaca gcgcgagaaa ttcggcttcc tgctcgacgc cctgaaatat ggtactccgc
     2101 cgcacgcagg tctggcattc ggtcttgacc gtctgaccat gctgctgacc ggcaccgaca
     2161 atatccgtga cgttatcgcc ttcccgaaaa ccacggcggc agcgtgtctg atgactgaag
     2221 caccgagctt tgctaacccg actgcactgg ctgagctgag cattcaggtt gtgaagaagg
     2281 ctgagaataa ctgatatgac tcaaatacac gaaatcattc gcgttgcatc gaggcgacaa
     2341 ctgagtgaac tcccatgagc atagataact atgtgaatgg gatgagcgaa ggcagtcaac
     2401 gaagaggcag cgtgaaggat aaagtgtata agcgtcccgt ttcgatctta gtggtcatct
     2461 acgcacaaga tacgaaacgg gtgctgatgt tgcagcggcg tgatgacccc gatttctggc
     2521 agtcggtaac cggcagcgtg gaagagggtg aaaccgcgcc gcaagctgcc atgcgcgaag
     2581 taaaggaaga ggtcaccatt gatgttgtcg ctgaacaact gaccttaatt gactgtcagc
     2641 gcacggtaga gtttgaaatt ttttcacatt tacgtcatcg ctatgcgccg ggcgtgacgc
     2701 gtaatacgga atcatggttc tgtcttgcgc tcccgcacga acgccaggta gtcttcactg
     2761 aacatctggc ttacaagtgg cttgatgcgc ctgctgccgc ggcgctcact aagtcatgga
     2821 gcaaccggca ggcgattgaa cagtttgtta ttaacgctgc ctgaacaggc agggctatct
     2881 ggagatattt ttatggcagg tcatagtaaa tgggccaaca ccagacatcg taaagctgcg
     2941 caggatgcta agcgcggtaa aatcttcact aaaatcattc gtgagctggt aaccgcggct
     3001 aagctgggcg gtggcgatcc ggacgctaac ccgcgtctgc gtgcggcggt ggataaagca
     3061 ctgtctaaca acatgacccg tgacaccctg aaccgcgcaa ttgcacgtgg tgtgggcggt
     3121 gatgatgatg caaacatgga aaccatcatc tacgaaggtt acggtcctgg cggcacggca
     3181 atcatgattg aatgtctgtc tgacaaccgc aaccgtaccg ttgctgaagt gcgtcacgca
     3241 ttcagcaaat gtggcggtaa cctcggcact gacggttccg tagcctatct gttcagcaaa
     3301 aaaggcgtga tctccttcga gaaaggcgac gaagacacca tcatggaagc agctctggaa
     3361 gcaggtgctg aagacgttgt gacatatgat gacggcgcga ttgatgtcta cactgcatgg
     3421 gaagaaatgg gtaaagtgcg cgacgctctg gaagcgtcag gtctgaaagc agacagcgcg
     3481 gaagtttcca tgatcccgtc caccaaagct gatatggatg cagaaaccgc accgaaactg
     3541 atgcgtctga tcgatatgct ggaagattgc gacgacgtgc aggaagttta ccataacggt
     3601 gaaatctctg atgaggttgc agcgactctc tgatgaggcc tgctaaacag caaaacggag
     3661 acgcgtgatg gctattattc tcggcattga cccgggttcg cgcgtgaccg gctacggcgt
     3721 catccgccag gtaggtaggc aactatccta cttgggtagc ggatgcatac gcaccaaagt
     3781 ggatgattta ccgtttcgtc tgaaactcat ctatgcgggc gtgacggaaa tcatcaccca
     3841 gttccagcct gattatttcg ccattgaaca agtctttatg gcaaagaacg ctgactcagc
     3901 cctgaaactg gggcaggcgc gtggcgtggc gattgtggcg gcggtgaatc aggagttgcc
     3961 agtatttgaa tacgcggcac gtcaggtaaa gcaaacggtg gtaggtattg gtagtgccga
     4021 aaaaagccag gtgcagcata tggtccgcac cttgctgaaa ctgcccgcta atccacaggc
     4081 ggatgccgcc gatgcgttag ctatcgcgat tacccattgt cacgtcagcc agaatgcaat
     4141 gcagatgagc gaatcgcggc tgaacctggc gagagggcga ctgcgttaag ttataccgcc
     4201 tcggtcagtt caggctgagg cgtttcaact ccctccgctt gaatcaacac caaacccgga
     4261 tgatgccaca aactggctgg cgtgacggtt ttacgctccc acggaataga acctaagaac
     4321 cagaatttcc agaaagtgag ttttgcattc ggattgctat ttaacagttg tccaaacgtc
     4381 tctatttcac ccaccggaat acatagcgcc tctttataaa tatcaaagac aaattttgaa
     4441 cagaactggc gggaagattc gtatttaaaa ccggtgtggt aaagtttgcg tagccgggag
     4501 ggaacctgtt caacaattcg ttgtttctgc tgttctgtca gcccagcgtc taatcgcttt
     4561 atagcatagc gttgattagc agagcgtttt ataaaacggg atagcgtagt gatggttgag
     4621 aggggaacac ggctttctgc aaccagaaag tcttcaccgt tatgaccgat aatgatcccg
     4681 acgtgattac tccagcaatt tgatgcggct gatatttgac caaataaggc agcacctata
     4741 catgtaaaga cgatatctcc aatttcatat tcagcagggt aattaatatt cacgttgtca
     4801 ttccattgaa atagatacga atatacgtaa tagcataaaa aaattatttt ttcaggaggc
     4861 gcaatgtata tttttattac gcatttcttc actgaatacg taatatttaa atatttgctt
     4921 ccaatataac ctgtagaata aatcatactg cgccattttt cagatcgttg ggacgcctcg
     4981 caagttttct tcatccttcg ctggatatct atccagcatt tttttatcat acagcattat
     5041 ctttgattca ttacgcagga gcgtcatgtg ataggcagac tcagaggcat catcattgaa
     5101 aaacaacccc cgctggtgtt aattgaagtg ggcggcgtag gctatgaagt gcatatgccg
     5161 atgacctgtt tttatgtact ccctgaagcg ggtcaggaag cgatcgtttt cacccacttt
     5221 gtggtgcgtg aagacgcgca actgctgtac ggttttaaca ataaacaaga gcgcacattg
     5281 ttcaaagagt tgatcaaaac caacggcgtc ggcccgaagt tggcgctggc gatcctctcc
     5341 ggaatgtcag cgcagcagtt cgttaatgcc gttgagcgtg aagaagtggg ggcactggtg
     5401 aaactgccgg gtattggcaa aaaaaccgcc gaacgcttga ttgttgaaat gaaagaccga
     5461 tttaaaggtt tgcatggcga tctgtttacc ccggccgccg acctggtact cacatcacct
     5521 gccagcccgg cgaccgacga tgctgaacag gaagcggttg ccgcgctggt ggcgctgggc
     5581 tataaaccac aagaagcaag ccgcatggtg agcaaaatcg ctcgccctga cgccagcagt
     5641 gaaacattaa ttcgcgaagc cctacgcgct gcgttatgag gtaaaggatg attgaagcag
     5701 accgtctgat ttctgccggt acgactttgc cggaagatgt ggcagatcgc gccattcgcc
     5761 ctaaattact ggaagagtat gttggtcagc cgcaggttcg ttcacagatg gagattttca
     5821 tcaaagcagc gaaactgcgc ggcgatgccc tcgatcattt gttgattttt ggtcctccgg
     5881 ggttgggtaa aactacgctt gccaacattg tcgccaatga aatgggcgtt aatttacgca
     5941 cgacttctgg tccggtgctg gaaaaagcgg gcgatttggc tgcgatgctc actaaccttg
     6001 aaccgcatga cgtgctgttt attgatgaga tccaccgtct atcgccagtt gttgaagaag
     6061 tgctgtaccc ggcaatggaa gactaccaac tggatatcat gattggtgaa ggtccggcgg
     6121 cacgctccat taaaattgat ttgccgccgt ttaccctgat tggtgcaact acgcgcgcag
     6181 gttcgctgac atcaccgttg cgcgaccgtt ttggcattgt gcaacgtctg gagttttatc
     6241 aggtgccgga tctgcaatat atcgtcagtc gcagcgcacg ctttatgggg cttgagatga
     6301 gtgatgacgg cgcgctggaa gttgctcgtc gtgcgcgcgg tacgccgcgc attgccaacc
     6361 gtctgctgcg tcgagtgcgt gatttcgccg aagtgaagca cgatggcacc atctcggcag
     6421 atatcgctgc tcaggcgctg gatatgttga atgtcgatgc tgaaggtttc gattatatgg
     6481 accgcaaatt gttgctggcg gtaatcgata agttctttgg tggacctgta ggtctggata
     6541 acctggcggc agccattggc gaagaacgtg aaaccattga ggatgtgctg gaaccttatt
     6601 tgattcagca aggctttttg cagcgtacac cgcgtgggcg tatggcgacg acgcgggcgt
     6661 ggaatcactt tggcataacg ccgccagaaa tgccgtaagt cggattggtc gctcgcgccg
     6721 catccgacat tggcagagtg cctgatgcga cgctgttcgc gtcttatcag gcctaccaga
     6781 gttagcgaac cgtaggtcgg ataaggcgct cgcgccgcat ccgacaaatg tgttcagcga
     6841 tagattagct ggcctgcttt ttcatcatac tgataataaa taacagtgct gcacatagca
     6901 ccaccgacgg acccgccggc gtatcgtaaa atgcggaaaa ggttaaaccg cccgttacgg
     6961 caaccatccc caccaacaca gcgacacctg ccatctgttc cggcgtgcgg gcaaagcgac
     7021 gtgcagtagc agcaggaata atcagcagtg aagtaataat caacgcgcca acaaatttca
     7081 tcgctacacc aatcgtcaat gccgtcacca gcatcaacaa caatttcacg cgctgtaatt
     7141 tcacaccatc aataaacgcc agatccgggc taatcgtcat cgacagcaaa ttgcgccatt
     7201 gccagaacaa aatagccacc acgatgacca cgccaatcgc aatagcgatg agatcttctg
     7261 gcgtcactgc cagcaaatca ccgaacaggt aagccatcaa atcaacacga atgttagaca
     7321 tcagactaac gaccaccagg cccagcgaca gggcactgtg cgccataatc cctaataacg
     7381 tgtcaatcgc cagctgtgga cgcttctcca gccataccag accgcccgcc aggagcagcg
     7441 taacggcaat taccgcatag aatggattca cgtccagcaa caaaccaaac gcgacgccaa
     7501 gtaatgaggc atgagccagc gtatcaccga aataagacat acgacgccag actacaaacg
     7561 aacccagcgg acccgcggca caggcgagca tgatcccggc taaccaaccg ggaaataata
     7621 attcaatcat gagcgatcat tttcccgacg caaaacaatt cgtccctgta aatcgtgacg
     7681 atgattatga tgatggcgat agatacccag ttgttcagca ccacgaggac caaacataga
     7741 aataaactcc ggatgtaggg aaacaacttc cggtgtgccg gaacaacaaa tgtggtgatt
     7801 cagacacagc acttcatcgg tttttgccat taccagatgc agatcgtgag agaccattaa
     7861 aacgccacaa tccagttcgt gacgcaactg gtcaataagg tcatataacg ccacctggcc
     7921 atttacatcc acgccttgag tgggttcatc cagcactaat aattgcggtc gatttaacaa
     7981 tgctcgcgct aacagtacac gctgtgtttc gccaccagag agcttttgca tcggtgcgtt
     8041 aatcagatgc ccggcctgga cacgtttcag tgcaggcaaa atatcttctt tatgtgtgcc
     8101 agggcgtaag cgtaaaaaac ggtttacggt cagtggcaag gtggtgtcga gatacagctt
     8161 ctgcggtaca tagccgatgc gcagttttcc gttgcgcttg ataacccctt catcgggtgt
     8221 taccagcccg agcactaccc gtaccagtgt cgacttacct gcgccatttg gcccaagtaa
     8281 agtcaaaatt tttccaggtt taagttccag cgacacatca gagaggacgc ggcgttggcc
     8341 aaaagaaacc gagacatttt ccagggaaac cagacttgtc atgttaattt tagtcttgca
     8401 gtagtcatga gatgttataa tatcacaatt ctcatattca ttacgatgat tggtcgcatt
     8461 atgttacata aaaaaacgct tcttttcgca gcattatccg ccgctctctg gggaggtgca
     8521 acacaggccg cagatgccgc cgttgtcgct tcgcttaaac ccgttgggtt catcgcttct
     8581 gccattgctg atggggtaac agaaacagag gttttacttc ctgacggcgc ttcagaacat
     8641 gattattcac tgcgcccatc ggatgtaaaa cgcttacaga acgcggactt agtcgtttgg
     8701 gttggcccgg agatggaagc gtttatgcaa aaaccggtaa gcaaattacc aggggcgaag
     8761 caggtaacga ttgcgcagct tgaagatgtg aaaccgctac tgatgaaaag tattcacggc
     8821 gatgatgatg atcacgacca cgcggaaaaa agtgacgaag atcaccatca cggcgatttc
     8881 aacatgcatc tttggctttc cccagagata gcgcgggcta cagcggttgc aatccatgga
     8941 aaattagtgg aacttatgcc gcaaagtcga gccaaacttg acgccaacct gaaggatttt
     9001 gaggcacaat tagcctcaac cgaaacgcag gttggtaacg agctcgcgcc gctcaagggg
     9061 aaaggttatt tcgtttttca cgatgcttac ggctatttcg aaaaacagtt cggactgaca
     9121 ccgcttggtc attttaccgt taaccctgag attcaacctg gcgcgcagcg tttacatgaa
     9181 ataagaacac agttggttga gcaaaaagca acctgcgttt ttgctgagcc acagttcagg
     9241 ccagcggtcg ttgagagcgt cgcacgaggg acatccgttc gtatgggaac gttggatccc
     9301 ctggggacga atatcaaact gggtaaaaca agctattcag aattcctgag tcaattagcc
     9361 aaccagtatg cgagctgcct gaaaggagat taatgaggaa gtgattacgt gcaacagata
     9421 gcccgctctg tcgccctggc gtttaataat ttaccgcgac cacaccgcgt tatgttgggg
     9481 tcgctcaccg ttcttactct ggccgtcgct gtctggcggc cctatgttta tcaccgcgat
     9541 gccacgccaa ttgtcaaaac cattgagctg gaacagaacg aaattcgttc gctcttacct
     9601 gaagccagtg agccgattga tcaagctgca caagaagatg aagccattcc ccaggacgaa
     9661 ctggatgaca aaatcgccgg tgaagcgggc gtgcatgaat atgttgtttc cactggcgat
     9721 acgctaagca gcattctcaa tcagtatggt attgatatgg gtgatatcac ccaactggct
     9781 gcggccgaca aagaattgcg taacttgaaa atcggtcaac aactctcctg gacattaacc
     9841 gcggacggcg aactgcagcg cctcacctgg gaagtgtctc gtcgtgaaac ccgaacctat
     9901 gaccgtactg ccgctaacgg ttttaaaatg accagcgaaa tgcagcaagg agagtgggtt
     9961 aacaatctgc tgaaaggtac cgtcgggggg agctttgttg ccagcgccag aaacgccggt
    10021 ttaaccagcg ccgaagtgag cgcagtgatt aaagccatgc agtggcaaat gaatttccgc
    10081 aaactgaaaa aaggcgatga atttgcggtg ttaatgtctc gagaaatgct tgatggtaaa
    10141 cgtgagcaaa gccaactgct gggcgtacgt ttgcgttcag aaggtaaaga ttattacgct
    10201 atccgcgctg aagatggcaa attctacgat cgtaacggta ctggtctggc gaaaggattc
    10261 ttgcgattcc cgacggcgaa acagttccgt atctcgtcta actttaaccc gcgtcgtact
    10321 aatccggtga ccggtcgcgt tgcaccacac agaggtgttg atttcgccat gccgcagggt
    10381 acgccagtgc tttcagtggg tgacggtgaa gtggtggttg ccaaacgcag tggcgcagca
    10441 ggttattatg tggctattcg tcatggtcgc agctacacca cgcgttatat gcacttgcgc
    10501 aagattctgg tgaaaccggg acagaaggtg aaacgtggcg accgtatcgc gctttccggt
    10561 aataccggac gttcaaccgg gccgcatctg cactatgaag tatggataaa ccagcaggcc
    10621 gtaaacccgc tgacggcaaa actgccgcgt accgaagggc tgaccggctc cgatcgtcgc
    10681 gaattcctgg cgcaggccaa agagattgtg ccgcagctac ggtttgatta attaacatcc
    10741 attcgcagcc ggtacgcagt cagtaccggc tttttttatt tggtgcgggg caagttgcgc
    10801 cgctacacta tcaccagatt gatttttgcc ttatccgaaa ctggaaaagc atggaaacga
    10861 aaaaaaataa tagcgaatac attcctgagt ttgataaatc ctttcgccac ccgcgctact
    10921 ggggagcatg gctgggcgta gcagcgatgg cgggtatcgc tttaacgccg ccaaagttcc
    10981 gtgatcccat tctggcacgg ctgggacgtt ttgccggacg actgggaaaa agctcacgcc
    11041 gtcgtgcgtt aatcaatctg tcgctctgct ttccagaacg tagtgaagct gaacgcgaag
    11101 cgattgttga tgagatgttt gccaccgcgc cgcaagcgat ggcaatgatg gctgagttgg
    11161 caatacgcgg gccggagaaa attcagccgc gcgttgactg gcaagggctg gagatcatcg
    11221 aagagatgcg gcgtaataac gagaaagtta tctttctggt gccgcacggt tgggccgtcg
    11281 atattcctgc catgctgatg gcctcgcaag ggcagaaaat ggcagcgatg ttccataatc
    11341 agggcaaccc ggtttttgat tatgtctgga acacggtgcg tcgtcgcttt ggcggtcgtc
    11401 tgcatgcgag aaatgacggt attaaaccat tcatccagtc ggtacgtcag gggtactggg
    11461 gatattattt acccgatcag gatcatggcc cagagcacag cgaatttgtt gatttctttg
    11521 ccacctataa agcgacgttg cccgcgattg gtcgtttgat gaaagtgtgc cgtgcgcgcg
    11581 ttgttccgct gtttccgatt tatgatggca agacgcaccg tctgacgatt caggtgcgcc
    11641 caccgatgga tgatctgtta gaggcggatg atcatacgat tgcgcggcgg atgaatgaag
    11701 aagtcgagat ttttgttggt ccgcgaccag aacaatacac ctggatacta aaattgctga
    11761 aaactcgcaa accgggcgaa atccagccgt ataagcgcaa agatctttat cccatcaaat
    11821 aaaaaagcct ctcgcgagga gaggccttcg cctgatgata agttcaagtt tgcttcagaa
    11881 tattcgaaat ctgttgaact atcattgaac tataggccgg atgtggcgtt ttcgccgcat
    11941 ccggcaacgt acttactcta ccgttaaaat acgcgtggta ttagtagaat ccacggtact
    12001 catcacgtca ccctgggtga caatcaccag gtcaccagac atcaagtaac ctttatcgcg
    12061 cagcagatta accgcttcgc tggcagctgc tacgccgtca ttagcgctat caaagtgcac
    12121 cggcgtaacg ccacgataga gagcagtcag gttcagcgta cgttcatggc gcgacatggc
    12181 gaaaattggc agaccagagc tgatacggga ggtcatcagc gcggtacgac ccgattcggt
    12241 catggtaatg atcgccgtaa cgcctttcag gtggttagct gcgtacattg ctgacatggc
    12301 aatagcttct tccacattgt cgaactgaac gtccagacgg tgtttagaaa cgttgatgct
    12361 cgggattttt tccgcaccca ggcaaacgcg cgccatggct gcaacagttt ctgacggata
    12421 ctgcccagcg gcagtttctg cagacagcat cacagcgtca gtaccatcca gaacggcgtt
    12481 tgctacgtcc atgacttctg cacgcgtcgg catcgggtta gtaatcattg actccatcat
    12541 ctgggtcgcc gtgattaccg ctcggtttag ctgacgcgca cgacggatca acgctttctg
    12601 aatgccgacc agttccgggt cgccaatttc cacaccgagg tcgccgcgag caaccattac
    12661 cacgtcagag gcgaggatga tgtcatccat tgcattctgg ctgcaaacgg cttccgcacg
    12721 ttcaaccttg gcaacaattt ttgcatcaca tcctgcatcg cgtgccaggc gacgggcata
    12781 gttcagatct tcgccgcagc gtgggaagga gacagccagg taatcaacgc caatcaacgc
    12841 cgcagtctta atgtctgctt tgtctttttc ggtcagcgct tcagccgaca aaccgccgcc
    12901 aagtttgttg atacctttat tgttggagag gggaccaccg acggtgactt cggtgaacac
    12961 tttcatgccc tgaacttcca gtacttttaa ctggacgcga ccatcgtcca gcagcaggat
    13021 gtcaccaggc acgacgtcag caggcaggcc tttgtagtcg ataccgactt tttctttgtc
    13081 gccttcacct ttacccaggt tggcgtcgag caggaattta tccccaatat tgaggaaaac
    13141 tttgccttct ttaaaggtgg atacacggat tttgggcccc tggaggtcac ccagaatagc
    13201 cacatgacgc cccagttttg cggcaatctc acgaacttta tccgcgcgca ttttgtgatc
    13261 ttcaggcgag ccgtgagaaa agttcatacg tacaacgttg gcacctgccg cgataacttt
    13321 ttcaaggtta ttatcgcgat ctgttgctgg gcctaacgtg gtaacgattt ttgttctgcg
    13381 aagccttctg gacatgtaat actccgttga ctgaaacaac caggtgttgc ttgaacatga
    13441 aatccgaatg aaataacgcc gcgatggcga taaattaatc tcattcggat gtcgtataag
    13501 attaggacag tgacagtcgt ttttagcgat cgtcacttaa attaagtaac tgcttatcaa
    13561 aacgcgattc cttgacccgc ttcaagttat ctctgaattt tgcaccgcgt cgcaaagtaa
    13621 atcctgtcgc cagcacatct atcacggtca gctgtgcaag tcgagaaacc atgggcatat
    13681 aaatgtcagt atcttccggt acgtcgaggg taattgccag cgttgcttcc cgggcgagcg
    13741 gggtacccgc agaggtgagg gcaatcacca tggcgtcgtt ttcgcgtgcc agctgcgcca
    13801 gctcgaccag attttttgtt cttcctgtgt gagaaatcag caccaccacg tctccgtcgc
    13861 tacaattcat acaactcatg cgttgcagca cgatatcatc ggagtacacc accggaacat
    13921 taaaacgaaa gaacttattc atcgcatcgt gggcaacggc ggcagaagag cctaatccga
    13981 aaaaggcgat tttttttgcc tgagtgagca agtcgacggc gtggttgatg gcagatttat
    14041 ccagtgaatg acggacatga tcgagcgttg ccattgcgga ctcaaatatt ttccccgtgt
    14101 atgattcaac gctgtcatct tcattgacgt tgcgattaac atagggagtg ccattcgcca
    14161 gactttgtgc cagatgaagt ttaaaatcag gaaaaccgcg cgtgtccatg ctgcgacaga
    14221 aacgattcac cgtcggttcg ctaacattgg cttccagcgc cagagcagca atactcgaat
    14281 ggatcgcgtt atcgggcgaa gccagaatga cctcggcaac tttgcgctct gatttgctca
    14341 aatgttccag ctgagactgg attttttcca gcatattcat gatgtaaaga gactcacggg
    14401 taatgacgat ttccgcactg aaagaaatcg aaatgcagtt ttgtcagata ttacgcctgt
    14461 gtgccgtgtt aatgacaaaa gcagataaaa aagttgttat ttttttcata acatgatcag
    14521 tgtcagattt ttaccgaatg gaaaacgatg atttttttat cagttttgcc gcactttgcg
    14581 cgcttttccc gtaatcgcac gggtggataa gcgtttacag ttttcgcaag ctcgtaaaag
    14641 cagtacagtg caccgtaaga aaattacaag tataccctgg cttaagtacc gggttagtta
    14701 acttaaggag aatgacatgg cggtaacgca aacagcccag gcctgtgacc tggtcatttt
    14761 cggcgcgaaa ggcgaccttg cgcgtcgtaa attgctgcct tccctgtatc aactggaaaa
    14821 agccggtcag ctcaacccgg acacccggat tatcggcgta gggcgtgctg actgggataa
    14881 agcggcatat accaaagttg tccgcgaggc gctcgaaact ttcatgaaag aaaccattga
    14941 tgaaggttta tgggacaccc tgagtgcacg tctggatttt tgtaatctcg atgtcaatga
    15001 cactgctgca ttcaaccgtc tcggcgcgat gctggatcaa aaaaatcgta tcaccattaa
    15061 ctactttgcc atgccgccca gcacttttgg cgcaatttgc aaagggcttg gcgaggcaaa
    15121 actgaatgct aaaccggcac gcgtagtcat ggagaaaccg ctggggacgt cgctggcgac
    15181 ctcgcaggaa atcaatgatc aggttggcga atacttcgag gagtgccagg tttaccgtat
    15241 cgaccactat cttggtaaag aaacggtgct gaacctgttg gcgttgcgtt ttgctaactc
    15301 cctgtttgtg aataactggg acaatcgcac cattgatcat gttgagatta ccgtggcaga
    15361 agaagtgggg atcgaagggc gctggggcta ttttgataaa gccggtcaga tgcgcgacat
    15421 gattcagaac cacctgctgc aaattctctg catgattgcg atgtctccgc cgtctgacct
    15481 gagcgcagac agcatccgcg atgaaaaagt gaaagtactg aagtccctgc gccgcatcga
    15541 ccgctccaac gtacgcgaaa aaaccgtacg cgggcaatat actgcgggct tcgcccaggg
    15601 caaaaaagtg ccgggatatc tggaagaaga gggcgcgaac aagagcagca atacagaaac
    15661 tttcgtggcg atccgcgtcg acattgataa ctggcgctgg gccggtgtgc cattctacct
    15721 gcgtactggt aaacgtctgc cgaccaaatg ttctgaagtc gtggtctatt tcaaaacacc
    15781 tgaactgaat ctgtttaaag aatcgtggca ggatctgccg cagaataaac tgactatccg
    15841 tctgcaacct gatgaaggcg tggatatcca ggtactgaat aaagttcctg gccttgacca
    15901 caaacataac ctgcaaatca ccaagctgga tctgagctat tcagaaacct ttaatcagac
    15961 gcatctggcg gatgcctatg aacgtttgct gctggaaacc atgcgtggta ttcaggcact
    16021 gtttgtacgt cgcgacgaag tggaagaagc ctggaaatgg gtagactcca ttactgaggc
    16081 gtgggcgatg gacaatgatg cgccgaaacc atatcaggcc ggaacctggg gacccgttgc
    16141 ctcggtggcg atgattaccc gtgatggtcg ttcctggaat gagtttgagt aatatctgcg
    16201 cttatccttt atggttattt taccggtaac atgatcttgc gcagattgta gaacaatttt
    16261 tacactttca ggcctcgtgc ggattcaccc acgaggcttt ttttattaca ctgactgaaa
    16321 cgtttttgcc ctatgagctc cggttacagg cgtttcactc ataaatcctc tgaatgaaac
    16381 gcgttgtgaa tcatcctgct ctgacaactc aatttcagga gcctttatga atccacaatt
    16441 gttacgcgta acaaatcgaa tcattgaacg ttcgcgcgag actcgctctg cttatctcgc
    16501 ccggatagaa caagcgaaaa cgtcgaccgt tcatcgttcg cagttggcat gcggtaacct
    16561 ggcacacggt ttcgctgcct gccagccaga agacaaagcc tctttgaaaa gcatgttgcg
    16621 taacaatatc gccatcatca cctcctataa cgacatgctc tccgcgcacc agccttatga
    16681 acactatcca gaaatcattc gtaaagccct gcatgaagcg aatgcggttg gtcaggttgc
    16741 gggcggtgtt ccggcgatgt gtgatggtgt cacccagggg caggatggaa tggaattgtc
    16801 gctgctaagc cgcgaagtga tagcgatgtc tgcggcggtc gggctgtccc ataacatgtt
    16861 tgatggtgct ctgttcctcg gggtgtgcga caagattgtc ccgggtctga cgatggcagc
    16921 cctgtcgttt ggtcatttgc ctgcggtgtt tgtgccgtct ggaccgatgg caagcggttt
    16981 gccaaataaa gaaaaagtgc gtattcgcca gctttatgcc gaaggtaaag tggaccgcat
    17041 ggccttactg gagtcagaag ccgcgtctta ccatgcgccg ggaacatgta ctttctacgg
    17101 tactgccaac accaaccaga tggtggtgga gtttatgggg atgcagttgc caggctcttc
    17161 ttttgttcat ccggattctc cgctgcgcga tgctttgacc gctgccgctg cgcgtcaggt
    17221 tacacgcatg accggtaatg gtaatgaatg gatgccgatc ggtaagatga tcgatgagaa
    17281 agtggtggtg aacggtatcg ttgcactgct ggcgaccggt ggttccacta accacaccat
    17341 gcacctggtg gcgatggcgc gcgcggccgg tattcagatt aactgggatg acttctctga
    17401 cctttctgat gttgtaccgc tgatggcacg tctctacccg aacggtccgg ccgatattaa
    17461 ccacttccag gcggcaggtg gcgtaccggt tctggtgcgt gaactgctca aagcaggcct
    17521 gctgcatgaa gatgtcaata cggtggcagg ctttggtctg tttcgttata cccttgaacc
    17581 atggctgaat aatggtgaac tggactggcg ggaaggggcg gaaaaatcac tcgacagaaa
    17641 tgtgatcgct tccttcgaac aacctttctc tcatcatggt gggacaaaag tgttaagcgg
    17701 taacctgggc cgtgcggtta tgaaaacctc tgccgtgccg gttgagaacc aggtgattga
    17761 agcgccagcg gttgtttttg aaagccagca tgacgttatg ccggcctttg aagcgggttt
    17821 gctggaccgc gattgtgtcg ttgttgtccg tcatcagggg ccaaaagcga acggaatgcc
    17881 agaattacat aaactcatgc cgccacttgg tgtattattg gaccggtgtt tcaaaattgc
    17941 gttagttacc gatggacgac tctccggcgc ttcaggtaaa gtgccgtcag ctatccacgt
    18001 aacaccagaa gcctacgatg gcgggctgct ggcaaaagtg cgcgacgggg acatcattcg
    18061 tgtgaatgga cagacaggcg aactgacgct gctggtagac gaagcggaac tggctgctcg
    18121 cgaaccgcac attcctgacc tgagcgcgtc acgcgtggga acaggacgtg aattattcag
    18181 cgccttgcgt gaaaaattgt ccggtgccga acagggcgca acctgtatca ctttttaaga
    18241 cgacaaattt gtaatcaggc gagagaaaac tctgatgaaa aactggaaaa caagtgcaga
    18301 atcaatcctg accaccggcc cggttgtacc ggttatcgtg gtaaaaaaac tggaacacgc
    18361 ggtgccgatg gcaaaagcgt tggttgctgg tggggtgcgc gttctggaag tgactctgcg
    18421 taccgagtgt gcagttgacg ctatccgtgc tatcgccaaa gaagtgcctg aagcgattgt
    18481 gggtgccggt acggtgctga atccacagca gctggcagaa gtcactgaag cggggggaca
    18541 gttcgcaatt agcccgggtc tgaccgagcc gctgctgaaa gctgctaccg aagggactat
    18601 tcctctgatt ccggggatca gcactgtttc cgaactgatg ctgggtatgg actacggttt
    18661 gaaagagttc aaattcttcc cggctgaagc taacggcggc gtgaaagccc tgcaggcgat
    18721 cgcgggtccg ttctcccagg tccgtttctg cccgacgggt ggtatttctc cggctaacta
    18781 ccgtgactac ctggcgctga aaagcgtgct gtgcatcggt ggttcctggc tggttccggc
    18841 agatgcgctg gaagcgggcg attacgaccg cattactaag ctggcgcgtg aagctgtaga
    18901 aggcgctaag ctgtaaaagt caaaatgccc gatcgaggat cgggcatttt tgtagcgttt
    18961 ttttgccggg tttaaccctg tacttttacc tgtccggcgg cgtgcttcgc gcgttcaatg
    19021 gcgtcatcaa cactctcagc ggtcgccagc gcaacaccca gacgacggct gccatcaatt
    19081 tccggcttac caaataaacg aatctgcaaa cctgcgccta cggcattctg cacattatca
    19141 aacgtgacat tctcactggt cagttgtggc aggataacgg cagaagcagc aggaccatac
    19201 tggcggatcc cgccaaccgg aagtccgagg aaggcacgta catgcagggc aaactctgag
    19261 agatcttgag aaattaacgt caccatcccg gtatcatgtg gacgagggga gacctcactg
    19321 aaaatcacct catcaccaca gacaaacagc tcaacaccaa acagaccata accgcccagt
    19381 gccagcacca ctttacgggc aatctcttgc gcacgttcaa gggcaagcgg gctcatttgc
    19441 tgtggttgcc aggattcacg gtagtcgcca tcttcctggc gatgacctac tggtgcacag
    19501 aaatggacgc catccaccgc gctgacggtt agcagggtaa tttcgaagtc aaatttaacg
    19561 acgccttcaa caattacgcg gcccgctccg gcgcgaccgc cttgctgagc gtattcccat
    19621 gcctgagcaa gttgctctgc agagcgaata aacgtctgcc ccttgccgga agagctcatc
    19681 accggtttta caatgcaggg atagccaatg gcggcaacca cctcgcggaa aaggctttcg
    19741 ctatcggcaa aacgataagt ggaagtgggc agctgcagct cttctgccgc caggcgacgg
    19801 ataccctcgc gattcatcgt taatttcgtt gcgcgagcgc aggggacaac attcagtcct
    19861 tcctcttcaa gttggatcag catatcggtg gcaatagctt cgatctccgg cacgatataa
    19921 tgtggttttt ccagtttaac cacacggcgt aatgcatcac catcaagcat attaatgaca
    19981 tgggagcgat gcgcgacatg catggctggt gcgtcggcat agcgatcgac ggcaatcacc
    20041 tctacgccga gacgctgaca ttcgattgcc acttctttac ccagttcacc ggagcctaat
    20101 aacatcacgc gagttgccgc cggacgcagc gcagtgccta ataacgtcat aacgaatatc
    20161 ccctgattaa ttccgcgcgc agtataaacg aaaacgtttg cgtgtgtctt tattgctgat
    20221 gttgatttct caaccgaaaa gaaatttact gtataaaatc acagttatta tgagaggctg
    20281 caaatggcgg ttgaagttaa atacgtagtc attcgtgagg gcgaagagaa aatgtcgttt
    20341 accagcaaaa aggaagccga tgcttatgac aaaatgcttg atacggcgga tctgcttgac
    20401 acctggctga caaattctcc agtgcaaatg gaagacgagc aacgtgaagc cctttcgcta
    20461 tggctggcag aacaaaaaga tgtgctgagc accattctga aaaccggcaa attaccgtcc
    20521 ccacaggtcg tcggtgctga atccgaagag gaagatgcct cacacgcggc ctgaagcaac
    20581 ttgcgctcct gacaatttgt accatgcttt ctcctgaatc attgtgctat ggagaaaaac
    20641 atgaaaaaaa gaggggcgtt tttagggctg ttgttggttt ctgcctgcgc atcagttttc
    20701 gctgccaata atgaaaccag caagtcggtc actttcccaa agtgtgaagg tctggatgct
    20761 gccggaattg ccgcgagcgt aaaacgtgat tatcaacaaa atcgcgtggc gcgctgggca
    20821 gatgatcaaa aaattgtcgg tcaggccgat cccgtggcct gggtcagttt gcaggacatt
    20881 cagggtaaag atgataaatg gtcagtaccg ctaaccgtgc gtggtaaaag tgccgatatt
    20941 cattaccagg tcagcgtgga ctgcaaagcg ggaatggcgg aatatcagcg gcgttaatgg
    21001 cttctgataa ttcgattgac cgttggcgga tgcggcgcga gtgccttgtc cgccccagaa
    21061 cgcaccacaa tcgtaggcct gagaagacgc aacagcgtcg catcgggcaa tcagcatcaa
    21121 acaatgccac tcaaaacgac aaactacttt cacctaaaat acccttatca cctgatatac
    21181 agtaaatacc ttacctggcg cgaatttctt tgaataacgg cctaccgccc cgcttatttg
    21241 cgcatctttt gtctcgatat acattttctg acatcctcat ccgctatgct acaggcacta
    21301 aaaatggtta ttgaggagca aatatggcta actggttaaa tcaactgcaa tccctgcttg
    21361 ggcaaagcag ttcttctact gaggtagcct gagtttaacg gacactcctt cctgaaatag
    21421 aatggcatca gaagga
//
LOCUS       DAJVTL010000072        21374 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.072, whole genome shotgun sequence.
ACCESSION   DAJVTL010000072 DAJVTL010000000
VERSION     DAJVTL010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21374
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.072"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..130
                     /locus_tag="OQQ26_002556"
     CDS             <1..130
                     /locus_tag="OQQ26_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001755162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCS1857977.1"
                     /translation="TRIEQTMVYAHFAPEYLQDAISLNPLRGGTEAESVHTVSTVE"
     gene            complement(407..724)
                     /locus_tag="OQQ26_002557"
     CDS             complement(407..724)
                     /locus_tag="OQQ26_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310918.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857978.1"
                     /translation="MKKIAAISLISIFLISGCAVHNDETSIGKFGLAYKSNIQRKLDN
                     QYYTEAEASLARGRISGAENIVKNDAAHFCVTQGKKMQIVDLKTEGAGLHGVARLTFK
                     CGE"
     gene            1130..2029
                     /gene="yegS"
                     /locus_tag="OQQ26_002558"
     CDS             1130..2029
                     /gene="yegS"
                     /locus_tag="OQQ26_002558"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
                     /protein_id="HCS1857979.1"
                     /translation="MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKG
                     DAARFVEEARKLGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATS
                     VGIPEALDKALKLAIAGNAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALG
                     GVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALIND
                     GLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHEITFNLDGEPLSGQ
                     NFHIEILPAALRCRLPPDCPLLR"
     gene            complement(2111..2884)
                     /locus_tag="OQQ26_002559"
     CDS             complement(2111..2884)
                     /locus_tag="OQQ26_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020238881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1857980.1"
                     /translation="MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLE
                     QKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVI
                     LDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGS
                     IAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNR
                     RGFNQVLPIEKIDIIVTDDAVSEVDKLALQKTRVKLITV"
     gene            complement(2990..4030)
                     /gene="gatD"
                     /locus_tag="OQQ26_002560"
     CDS             complement(2990..4030)
                     /gene="gatD"
                     /locus_tag="OQQ26_002560"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HCS1857981.1"
                     /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR
                     IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
                     CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE
                     NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAP
                     QMQSVLRELRFNQLILETVGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
                     LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
                     RNAMPGKVLLIP"
     gene            complement(4078..5433)
                     /locus_tag="OQQ26_002561"
     CDS             complement(4078..5433)
                     /locus_tag="OQQ26_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HCS1857982.1"
                     /translation="MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
                     AILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKL
                     GDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKF
                     GPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAK
                     QARSRLQAKFGGQEFQIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGD
                     LATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGG
                     MVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKAVLA
                     E"
     gene            complement(5437..5721)
                     /gene="gatB"
                     /locus_tag="OQQ26_002562"
     CDS             complement(5437..5721)
                     /gene="gatB"
                     /locus_tag="OQQ26_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HCS1857983.1"
                     /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI
                     ETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGVGIEALQNKILTILQG"
     gene            complement(5752..6204)
                     /gene="gatA"
                     /locus_tag="OQQ26_002563"
     CDS             complement(5752..6204)
                     /gene="gatA"
                     /locus_tag="OQQ26_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HCS1857984.1"
                     /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIARE
                     AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALI
                     VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
     gene            complement(6214..7475)
                     /gene="gatZ"
                     /locus_tag="OQQ26_002564"
                     /pseudo
     CDS             complement(6214..7475)
                     /gene="gatZ"
                     /locus_tag="OQQ26_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416598.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
     gene            complement(7504..8358)
                     /gene="gatY"
                     /locus_tag="OQQ26_002565"
     CDS             complement(7504..8358)
                     /gene="gatY"
                     /locus_tag="OQQ26_002565"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatY"
                     /protein_id="HCS1857985.1"
                     /translation="MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
                     VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM
                     IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQA
                     REFAEATRIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGVSGLSTKDI
                     QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIA
                     DCGCEGRA"
     gene            complement(8589..9641)
                     /gene="fbaB"
                     /locus_tag="OQQ26_002566"
     CDS             complement(8589..9641)
                     /gene="fbaB"
                     /locus_tag="OQQ26_002566"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HCS1857986.1"
                     /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGVSFAANPLYFDPKNIVELAI
                     EAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
                     AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
                     ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKITIA"
     gene            9898..11175
                     /locus_tag="OQQ26_002567"
     CDS             9898..11175
                     /locus_tag="OQQ26_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1857987.1"
                     /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGTVLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT
                     NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII
                     AVLFMIFFRESDNEITAIKVDDRDIALTQGEVK"
     gene            11172..12176
                     /locus_tag="OQQ26_002568"
     CDS             11172..12176
                     /locus_tag="OQQ26_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HCS1857988.1"
                     /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPNLIGRNILDWALRFDAFNKN
                     VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPASDVDSFIDDVALAS
                     SPTHKSDLAVAGAVVIAWAISRAIDGEIWSAIVDSLPSIARHAQQKRITTFSASLAAR
                     LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGINAVDPALKAELDAVNQLDFNRYAIALAKYRQQREAV
                     "
     gene            12173..13138
                     /locus_tag="OQQ26_002569"
     CDS             12173..13138
                     /locus_tag="OQQ26_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1857989.1"
                     /translation="MSGARLHTLLPELTTRQPVMVIGAAVIDVIADAYALPWRGCDIE
                     LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL
                     LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
                     ITTLGEQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL
                     AGLASGLPLADAVLLGNAVASWVVRHRGGDCAPTREELLLAHKNV"
     gene            complement(13112..13858)
                     /locus_tag="OQQ26_002570"
     CDS             complement(13112..13858)
                     /locus_tag="OQQ26_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HCS1857990.1"
                     /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW
                     VPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI
                     KQVALDQQQRPIEYNISHCRSDLYVFVCEE"
     gene            complement(13910..14728)
                     /locus_tag="OQQ26_002571"
     CDS             complement(13910..14728)
                     /locus_tag="OQQ26_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HCS1857991.1"
                     /translation="MQLRITSRKKLTALLCALGLISIVAIYPRQTVNFFYSTAVQITD
                     YIHFYGYRPVKSFAIRIPASYTIHGLDVSRWQERIDWQRVAKMRDNDIRLQFAFIKAT
                     EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVL
                     DVEERGKLSAKELRKRVSQWLKMVEKRTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
                     YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP"
     gene            complement(14793..15593)
                     /gene="thiD"
                     /locus_tag="OQQ26_002572"
     CDS             complement(14793..15593)
                     /gene="thiD"
                     /locus_tag="OQQ26_002572"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HCS1857992.1"
                     /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITVLVAQ
                     NTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNV
                     VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
                     QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
                     LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW"
     gene            complement(15590..16378)
                     /gene="thiM"
                     /locus_tag="OQQ26_002573"
     CDS             complement(15590..16378)
                     /gene="thiM"
                     /locus_tag="OQQ26_002573"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HCS1857993.1"
                     /translation="MQVDLLSSVQSAHTLHLFHQHSPLVHCMTNDVVQTFTANTLLAL
                     GASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVA
                     VGALDYRRHFCHELLSFKPAAIRGNASEIMALAGVANGGRGVDTTDAAANAIPAAQTL
                     ARETGAIVVVTGEVDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVVACCALPGDML
                     ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
     regulatory      complement(16413..16509)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(16601..16873)
                     /gene="rcnR"
                     /locus_tag="OQQ26_002574"
     CDS             complement(16601..16873)
                     /gene="rcnR"
                     /locus_tag="OQQ26_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II)-binding transcriptional repressor
                     RcnR"
                     /protein_id="HCS1857994.1"
                     /translation="MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAA
                     IRGAVNGLMREVIKGHLTEHIVHQEDELKREEDLDVVLKVLDSYIK"
     gene            16994..17818
                     /gene="rcnA"
                     /locus_tag="OQQ26_002575"
     CDS             16994..17818
                     /gene="rcnA"
                     /locus_tag="OQQ26_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt efflux protein RcnA"
                     /protein_id="HCS1857995.1"
                     /translation="MTEFTTLLQQGNAWFFIPCAILLGALHGLEPGHSKTMMAAFIIA
                     IKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIIGTA
                     FWMFWRTWRGERNWLENMHGHDYEHHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHAN
                     DIKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGL
                     ALTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIM"
     gene            18040..18378
                     /gene="rcnB"
                     /locus_tag="OQQ26_002576"
     CDS             18040..18378
                     /gene="rcnB"
                     /locus_tag="OQQ26_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II) efflux transporter accessory
                     subunit RcnB"
                     /protein_id="HCS1857996.1"
                     /translation="MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIA
                     DFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIK
                     AYDGEIFYHR"
     gene            complement(18460..19494)
                     /locus_tag="OQQ26_002577"
     CDS             complement(18460..19494)
                     /locus_tag="OQQ26_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative fimbrial-like adhesin protein"
                     /protein_id="HCS1857997.1"
                     /translation="MEIRIMLFILMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQ
                     MATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTIKLNLRFEWTNKNNITLSNNQTS
                     FTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG
                     KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLIILDSIPVSQLPATGN
                     KATINSKQGDIILRCKNLLGQQNQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFIL
                     ESNSSPVTLLNITNSSKGYTNLKEIAAKSKITDTTVSIPITASYYVYDTNKVKSGALE
                     ATALINVKYD"
     gene            complement(19510..>21374)
                     /locus_tag="OQQ26_002578"
     CDS             complement(19510..>21374)
                     /locus_tag="OQQ26_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
                     /protein_id="HCS1857998.1"
                     /translation="WKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSVRFSGVRLFRD
                     MQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADL
                     DVSVKEADGSVTTYLVPYAAVPNMLQPGVSNYDFAAGRSHIEGASKQSDFVQAGYQYG
                     FNNLLTLYGGSMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQSYQIA
                     YNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQNDFG
                     RKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQ
                     AYDENHHEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVG
                     SRDQFNYGVNLSYQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVS
                     WSGGVNLANRLSETFAVMNALGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLD
                     VSQSDSEAELRGNRKIAALYRGAVVRVNFDTDQRKPWFIKALRADGQPLMFGYEVNDI
                     HGHNIGVVGQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ"
BASE COUNT         5383 a         5475 c         4954 g         5562 t
ORIGIN      
        1 cacgcggatt gagcaaacta tggtttacgc tcattttgcg ccagagtacc ttcaggacgc
       61 catttctctt aatccgctaa gaggtggtac tgaggccgag agtgtccaca cagtgtccac
      121 agtagagtaa cgtttaaggg ctttcagtgg taatttatgc cgctcaaacc cgcattgtac
      181 cgttgaaagc ccctactggt gacaccctaa atctccctta cacgggctta ttttttgtac
      241 ataagctgta aagaaggatt gatccctgat aaccgtcttc cattgaccac atcgatagaa
      301 tcccccttca tagcacaatg cctttcacgt aacggtatcg tgctcgccca ggttccggct
      361 acgcacagcc agaacgcgca tgtttgacgc ttaccaaaaa atattctcac tctccacatt
      421 tgaatgtcag acgagcgacg ccatgtaatc ctgcaccttc tgtcttcagg tcaactatct
      481 gcattttttt gccctgagta acacagaaat gggctgcatc attttttact atattttctg
      541 caccagatat tctgcccctg gctaaagaag cttcggcttc ggtgtagtat tggttatcga
      601 gtttacgctg aatattactt ttatatgcaa gaccaaattt accgatactt gtttcatcat
      661 tatgcacagc acaaccagat ataagaaaaa tactaattaa tgatatagca gctatctttt
      721 tcatctcacc ttcccccatt aaataccaac gacactctct agtgtttaaa tataataatg
      781 gcatgattat tataattgaa taggattata ataaatgttc tgtacaacat ttcctacata
      841 agtaggaatt acggacattg aggcccttca gggtaactcc atgggggctt taatatatta
      901 tattgaagat gccactgttt agttgaatat taggtatatg ctcttttttg aaatttatcg
      961 gtggcagccg ttagtattcg ctgtccccat tgcaagctcc tggtggtaac cactgaatcc
     1021 tccatacttg aactgacttt ttatcctccg actttcatcc tgttctgact ccaccttttg
     1081 ttttctgctc tacactatct acagaccaat cataaaggca catacgatca tggcagaatt
     1141 tcccgccagc ttactgattc ttaatggcaa aagtactgac aatctaccct tgcgcgaagc
     1201 aattatgctg ttgcgtgagg aaggaatgac gatccatgtg cgggtcacct gggagaaagg
     1261 tgatgccgca cgatttgtag aggaggcccg gaagttgggc gtcgcaacgg tgattgccgg
     1321 tggtggcgat ggcaccatta atgaagtttc tacggcgttg attcagtgtg agggggatga
     1381 catacccgcg ctgggaattt tgccattagg aaccgccaat gattttgcca ccagtgtagg
     1441 gattcctgag gcactggata aggcgctgaa actggcaatt gccggtaatg ccattgcgat
     1501 agatatggcg caggtcaaca aacaaacctg ttttattaat atggcgacag gcgggtttgg
     1561 gacgcgtatt accacagaaa cgccggaaaa attaaaagcc gcgctgggtg gcgtctcata
     1621 catcattcat ggcttaatgc gtatggatac tctgcaaccg gaccgttgtg aaatccgcgg
     1681 tgaaaacttt cactggcaag gtgacgccct ggtcattggt attggtaacg ggcgtcaggc
     1741 cggtggcggt caacaattgt gcccgaacgc gttaattaac gatggcttgc tgcaactgcg
     1801 catttttacc ggcgatgaaa ttcttccggc tctcgtatca accttaaaat ctgacgaaga
     1861 taacccgaat attatcgaag gcgcttcgtc gtggtttgat atacaagccc cacacgaaat
     1921 cacttttaat cttgatggcg aaccgttgag tgggcaaaac ttccatattg aaatacttcc
     1981 ggcggcgttg cgttgtcgat taccaccaga ttgtccatta ttgcgttaat caaactattc
     2041 tctcttgaac cagggagaat ccgtaatgcc ggatgcggtg taaacacctt atccggcata
     2101 cagaacaata ctacaccgta attaatttta cccgtgtctt ctgcaatgcc agtttatcca
     2161 cctctgacac agcatcatcg gtaacaataa tgtcaatttt ttcgattggc agtacctgat
     2221 taaaaccgcg acgattaaat ttcgatgaat cgagaacggc aatcacttta tttgcggcgg
     2281 tgaccatcgc cccgctaatc gaataacctt cattaaaggt cgtaatacca ttaaccgcat
     2341 caataccatc agcaccgaca aacattaaat cggcattaat atcctgcaat gaacgctcgg
     2401 caatggaacc atgcatcgag cgcgttttat ggcggaccgt gccaccacag acgaccagag
     2461 taatgtcttt attttcggaa agggcaaacg ctgccgggag actgttggta atcaccgtga
     2521 tatttttagc ggtcattaat ccttcggcga taagcattgt ggtacttccg ctgtcgagaa
     2581 taacggtcat cccttcatgg atcattttga ctgccgcctg cgctattctg ttttttggcg
     2641 cgctggcgag ctgaaatcgc tctttaaacc cgacttcctg ggtctcggtt tcactattac
     2701 cggacattat tttcgccgca ccgccatgaa agcgcgtaac cacgcctttt tgttcgagaa
     2761 agcgcaaatc ggcacggatt gtcgcttccg aggcagcaaa tactcccgcc agatcctgaa
     2821 caagcacggt tccctgttca ttcactaatt ggatgatctt attccttcgc tcgaatgaat
     2881 tcatcgtcat ttacccatat tcaattgtgg ctagtgtaaa cgaaggggga ccattggtga
     2941 atgatctgtt ttgcacaata ccgggccagc atcacgctgg cccgcggttt catggaatga
     3001 gcaacacttt gcccggcatg gcattacgag cgatgtcacg caccgcctgg gtgaagcttt
     3061 caaagcttcc acggtgagcg attaatggct ccaggcttaa cttacgttct gtcagcaacc
     3121 ggctcgccgt ttcccactcc tgccccggcc aagggctgga atagttcatc caactgccga
     3181 taaccgtcag ctctttacgc aatattttgc caaacgttgc cgatgttaaa tgcagatcct
     3241 gatgcaacgt gcccaccagc gccagttggg catgaggacc ggcaatctct accgccagtt
     3301 cgacagtttg cggtacgcca accgtctcga ggataagctg attaaagcgc agttcgcgta
     3361 aaacgctctg catttgcggc gcgctcattt cgctactgtt aaatgtttgc atcgcaccga
     3421 aagattttgc cagtgccagt ttttctgagc taatgtcgat cgccgtcaca ctctttgctc
     3481 ccagcgcgac agcgcactga atagccagca ggccaatggt tccggcacca ataataataa
     3541 cgtttttatt ctcacaacct tgcgctaaat gaaaagcatg caggccaacg gtaatcggct
     3601 caataaaagc cccatcctca ataggcatat ccgtgggtag agcaaagaca ttttttcgct
     3661 taacgacaat atattcagca aatccaccat cacgccgcga gccaataaaa tcatattttg
     3721 cgcactggga ataaaaccct ttcaaacact ctggacaagt aaaacagggt aataacggca
     3781 cacaggcaac cgcatcgcca gggtgtaaat catcaacacc ggatcccacc gcatcaatat
     3841 agccgctaaa ttcatggcct aacgttattg gataataatg tgcaccattt ttaaatatcc
     3901 tgggtaaatc ggaaccacat aagcccgagc tggcaatttt tacccgcacc tcatcctgat
     3961 gtttaatttc aggaatgacg ctttctgcaa cgcgcacgat accatcagta tcattcacca
     4021 ctgatttcat aaaaactcct gattgttaag ggggataacc tccccctcag gtaaaaatta
     4081 ttctgcgaga acggctttct cttgtttaat aaaaccacgc gctctacgcc aggtcatgaa
     4141 aataccggta agataaattg cgccgataat aatgaaaccg ggaatatttt gcggggagaa
     4201 aacctgaatc agtaaccagg taatgggaga accgccctga tccattgaag ccaccatacc
     4261 cccggctttt aacgccccag cattagccgc cagttgggtg tgcaaaccaa tagtttgcgt
     4321 cgcgatccac agggtgatgc tcataatgat gacacccgag attaaggtgc ggaacagatt
     4381 tccacgatgc accgcgaccg ccatcgccac gaagaagccg atggtggcaa gatcgccaaa
     4441 cggcagtacc tgattacccg gaacacaaac agcaattaaa atggtgagcg ggataaaaat
     4501 caggcttgcc gataccaccg ccgtatgccc cagcagtaat gcgggatcca ggccaatctg
     4561 gaactcctga ccgccgaact tcgcctgtaa acgactacgg gcctgcttag cgatgggcgt
     4621 taaaccatcc atgatgggtt taatcacccg tggcatcagc agcataactg ccgccgtttt
     4681 taccgccagc tgcaatacac ctttgacatc gtaacccgcg aggatgccga taatcagccc
     4741 catcacaaaa cccacggtga caggctcgcc aaatggacca aatttgcgct gaatatcgtc
     4801 ggcgctaaat ttaattcggt taacgcctgg gattttctcg atgatagcat cgaccagcac
     4861 cgcaatcggc cccatatacg ccgacgtacc gtgcggaata gcaatacctt ccagctcaaa
     4921 gaaatttcgg gtatcgcggg caaaccagtc gccgagctta taaacaaacg ccgcgtgaat
     4981 taccacacct gccatcccta tcatccatga accggttgcc agatgcagca acgcgccggt
     5041 gaaggtcata tgccagatat tccagatatc aacatttacc acccgcgtca tacgggtcag
     5101 taacatcgcc acgttaacca gaatcgcaat cggaatcgcc accagcgcaa tttgcgacgc
     5161 ccaggtcatt ggtgaagagc ccggccagcc gacatcgacc acatgcagat tcaggtcgaa
     5221 attttccgcc atcgctttcg ccgccggacc aatggaatcc agcattaagc caatcacaag
     5281 gccaatgcca acaaagccaa tcccgatatg cagacccgct ttaaagcaat cgcctgcctt
     5341 catgcctaat attttagaaa aaataatgat gacaatcggc agcatcaccg tagggccgag
     5401 gtcgagaata taacgcatga cttctgaaaa cataggtcac ccctgtaaga tagtcagaat
     5461 tttattttgt aatgcttcga taccgacacc agaaataaaa ggcatgccgt gaactaacgg
     5521 aatatcgcca aaactacgat ccactttggc agtggtgcat atcaaatgca caccatccat
     5581 ataggtttct atttcattaa cccgacactg gattaattca acaggaatat tatgattctg
     5641 acacaactct ttaatttctt ccgccgccat cgtagaggtc gcaaccgcgc ctccgcaagc
     5701 gacaataatc ttgcgtttca taaatagtcc tttttattgt tacagaggga tttattcgtc
     5761 tgaatctaaa acatactttg taaagtattc ctttaactgg gtttcaggaa gagtgattag
     5821 tgtctcgacg atatcgggct gttgtaactt gccaaataaa cagcgcaaaa gtttcaattg
     5881 ctgctgcgga ttttccacaa tcaacgcaat aaccaacgac acctccacgt cgttatcatc
     5941 atccgcttgc tgaaaatgaa ctttatttgt tggccttaac agataaatgg ctgacgactt
     6001 agcatgaatc gcctcacaat gcggtatagc aatggcgtgc tgctcaagca ttattccggt
     6061 agggaactct gcttctctgg caattaatgc ctgtggccag gtatcatgaa ccacaccttt
     6121 ggcgagcatc tcattaccga tatgggttaa aacttcgcta cgatcgacaa aagaaattcc
     6181 gctacgaaca aacaggttag tcatataccg tccttattcc gcacagccgt agcgataggc
     6241 gcgcaaaaca tcataaattt tatccataat cagctgatgc ggtattgctg ataattcccc
     6301 ggactgaatg cgttcaaatt gtttgggaag atactgacta atcatgccca gtgggatgtc
     6361 cacgccttgc agattcacca tcatcgtttc gacgctattt ttaatccggc tatgcggcca
     6421 gtaataacga atacgatccg acaggctgta acgaatatcc agtaatgaat cgttaaaacc
     6481 cgtgcgataa tatttcttcc agtactgcgg ttcgtcgagc atcacttctt caattaccgc
     6541 caggcaaccg ctgcgatttt cgggggcgat aagttcctgc tcaatttgtg ccagcgcaaa
     6601 tatcgcctca cgtaaagcaa aggttaatgc gggaccgact ttcaatattg caaagtgatc
     6661 gcggactaat tcccaataag ccgtccgggt ctggtaatcg gtagaatgtg cttcataaac
     6721 cattcgggtg ttttctatcc attgcgccag cggctgcgct tcctgcggct gataatggat
     6781 aatattgctg tgatcaaatt ccacgcccgg ctgcaccacg atggcaatca cgcgtgttaa
     6841 cgcctctgcc agcccacggg caataaaggc cttttgatgc gtacgtaaag tattggcggc
     6901 atcttcaacc tgggtgatgt gtactgactg aatggcgctg gcctcaccgc ccggaaccgg
     6961 aacttcggtg ccaatgacat agctcagttg ctcacgctgg caatctgtcg ccacactttc
     7021 cgcagcaaag caaaacacag cagctcgttc cgcaaccgtt tctggtgcta acggtatggg
     7081 atcccccggc aggacattga cgcatcaaga tgaattttac tgaagccggc acgaacatat
     7141 tcctttacca gctcgacgga tttttccatc gccgcatccg cattttcttg ctgccagcag
     7201 tttggcccca gatgatcgcc gccgagaata atgcgttcgc gtgcaaaccc aactttatcg
     7261 gcaatcgtaa aaacaaattc gcgaaagtct gccggtgtca ttccggtata accgccaaat
     7321 tgattgacct ggtttgacgt tgcttcaatc agcactttgc gcgtgctgtt gcgatcaaat
     7381 gccagcgccg cttcgataac caacggatgg gcagaacaga ctgaacatat gccgatatgt
     7441 tcaccagctt tatgccgggc aattaacgtt ttcatgtttt ttctttgtta aatggcaggt
     7501 gcgttatgcc ctgccctcgc agccacaatc ggcaatcact ttgctcacca catcgcgcat
     7561 tgcggattta gccgactgca aataatcccg gggatcggtc gcttcggggt gctcggtcag
     7621 gtaatttttt aacgcctgcg agaaggcatt tttcagctcc gttgcaacgt tgattttgca
     7681 tatccccagt ttgatggttt gctgaatatc cttagtcgat aaccctgaca cgccatgcag
     7741 caccagcggt aagttcaccc actggcgaat gttctccagt cgagaaaaat caagcgccgg
     7801 tgcgctggca tacatcccat gagccgtgcc gatggcgacc gccagggaat caattctggt
     7861 tgcctcggca aattcacgcg cctgagcggg gttggtataa aaagcatcgg cttcattgac
     7921 ttgcacatca tcttcctggc cgccaagttg ccccagctcc gcttcgacgc tgacatcaaa
     7981 gcgatggcaa aaatccacca cctctttgac ccgtgaaata ttttgcgcaa aaggcaaatg
     8041 cgaggcgtca atcatgactg agcgcacgcc agaacgaacc ttctgagcga tatcgtcaaa
     8101 tttcgtgtga tggtcgagat gaattgccag tggatggtga tattgcttcg ccatcgcgct
     8161 gaccagcgcc aacagatttt ctgtaccagc atgagtaaat gtgccaggtg ttccggcgat
     8221 gatgaccggc gcatgcaggt tggcagcggt ttccaccacc acttgcatcg tttcgagatt
     8281 gtgaatattg aatgccggaa ccgcataacc gccgcgctgt gcgttgttca gcatctgctt
     8341 tgtcgatacc acgtacattt ttatatcctg tcgtttgttt tcgacttcaa aatataatga
     8401 aattatttgt ttttaaatgt cgagataacg atcacaaaaa cgacaatatg aaaattgttc
     8461 gaagagtgaa aggcaaaaaa aacggcctcc cgatagggaa gccgtagcaa agtgcgcgtt
     8521 attttatgcc ggatgcagtg taaacgcctt atccgtcata cgtggcagtg ctggtcgtac
     8581 aaagcacatc aggcgatagt aattttgcta tcgagataaa cgtcctgcac ggcgttaatc
     8641 agtttcacgc cgtcagccat cgatttcttg aacgccttac gtccaagaat cagccccatt
     8701 ccgccagcgc gtttgttgat aaccgcagta cgcactgcat cgctgaggtc agtttcaccg
     8761 cccgcagcac cgccggagtt tatcaaccca gcccggccca tatagcagtt agctaactga
     8821 taacgcacca gatcaatcgg gttttcgctg gtcaatttgc tgtaaacacg atcgtcggtg
     8881 taaccgtaat taattgcttt atagccgccg ttattttccg ccattttttg tttaacgata
     8941 tctgcaccga tggttgccgc cagatggttt gcctgaccgg tcaggtcggc ggaaacatgg
     9001 taatcaacgc catctttctt aaaggcggag ttacgcaaat aggcccacag cactgtcacc
     9061 atgcccagct cgtgcgcacg ttcaaaagcc gcagaaattt cttcaatctg gcgacgtgac
     9121 tcttccgaac caaaatagat agtcgcacca accgccaccg cgcccatgtt aaacgcctgc
     9181 tccacgctgg catacagcgt ttgatcgtag gtattcgggt aacttagcgt ctcgttgtga
     9241 ttaagtttga cgaggaatgg aatgcgatgc gcgtaacgcc gcgataccga cgccagcacg
     9301 ccgtaagttg acgccacaca gttacagccc gcttcgatcg ccagttcaac aatgtttttc
     9361 gggtcaaagt agagcgggtt agcagcaaat gaaactccgg cagagtgctc aacgccctgg
     9421 tcaaccggca gaatagaaag atatcctgtg ccagccagac gcccggtgtt gtacaacgtc
     9481 tgcatattac gtaacaccgc tggcgggcga ttattgtcaa tcattacgcg gtctacgtag
     9541 tcatgtccgg ggagataaag ctggtcagaa ggaattgtca tacaacggtg ctgtaaaagg
     9601 ttgtcggcgt ctttgccaag caactgcgca atatctgtca ttactatgct cccgtaaatt
     9661 ccgattggat aacggctatg gattgtcctg gcccgccttt tgcgggcaat cataatcctg
     9721 gtcgttacgg gcgagttttt ccatcttttg gatatttttt cagcgttttc tgttggctcg
     9781 attcatcaga aaaaatgtta gcgcggtcaa gttttcaccg caaaggtatt taaaaggtat
     9841 tattaagtgg tattgtcatc gcgtacctta cattacctgt catgaaggaa ttaaaagatg
     9901 aaaacaacag caaagctgtc gttcatgatg tttgttgaat ggtttatctg gggcgcgtgg
     9961 tttgtgccat tgtggttgtg gttaagtaaa agcggtttta gtgccggaga aattggctgg
    10021 tcgtatgcct gtaccgccat tgcggcgatc ctgtcgccaa ttctggttgg ctccatcact
    10081 gaccgctttt tctcggcgca gaaagtgctg gcggtattga tgttcgctgg tactgtgctg
    10141 atgtatttcg ctgcgcaaca gaccactttt gccgggttct tcccgttact gctggcctac
    10201 tcgctaacct atatgccgac cattgcgctg actaacagca tcgcttttgc caacgtgccg
    10261 gatgttgagc gtgatttccc gcgcattcgt gtgatgggca ctatcggctg gattgcctcc
    10321 ggtctggcat gtggcttctt gccgcaaata ctggggtatg ccgatatctc accgactaac
    10381 atcccgctgc tgattaccgc cggaagttct gctctgctcg gtgtgtttgc gtttttcctg
    10441 cccgacacgc caccaaaaag caccggcaaa atggatatta aagtcatgct cggcctggat
    10501 gcgctgatcc tgctgcgcga taaaaacttc ctcgtctttt tcttctgttc attcctgttt
    10561 gcgatgccac tggcgttcta ttacatcttt gccaacggtt atctgaccga agtcggcatg
    10621 aaaaatgcca ccggctggat gacgctcggc cagttctctg aaatattctt tatgctggca
    10681 ttaccgtttt tcactaaacg ctttggtatc aaaaaggtat tattgcttgg tctggtcacc
    10741 gctgcgatcc gctatggctt ctttatttac ggtagtgcgg atgaatattt cacctacgcg
    10801 ttactgttcc tcggtatttt gcttcacggc gtaagttacg atttttacta cgttaccgct
    10861 tacatctatg tcgataaaaa agcccccgtg catatgcgta ccgccgcgca ggggctgatc
    10921 acgctctgct gccagggctt cggcagtttg ctcggctatc gtcttggcgg tgtgatgatg
    10981 gaaaagatgt tcgcttatca ggaaccggta aacggactga ctttcaactg gtccgggatg
    11041 tggacttttg gcgcggtgat gattgccatt atcgccgtgc tgttcatgat ttttttccgc
    11101 gaatccgaca acgaaattac ggctatcaag gtcgatgatc gcgatattgc gttgacacaa
    11161 ggggaagtta aatgaaaaca gaacgtattc tcggtgctct ttatgggcag gcgttagggg
    11221 atgcgatggg gatgccctcc gagctttggc cacgcagccg cgttaaagca cactttggct
    11281 ggattgaccg ttttctgcct ggaccaaagg agaataacgc ggcctgttat tttaaccgcg
    11341 ccgaattcac cgacgatacc tcgatggcgc tgtgtctggc ggatgcgtta ctggaacgtg
    11401 aaggcaagat cgatccgaat ctgattgggc gtaatattct cgactgggcg ctgcgtttcg
    11461 acgcctttaa caaaaacgta ctaggtccga cctcgaagat tgctctcaac gccattcgcg
    11521 acggtaaacc cgttgctgaa ctggaaaaca acggcgtgac caacggcgca gcaatgcgcg
    11581 tctcgccatt aggttgtttg cttccggcga gtgatgttga ttcctttatt gatgatgtgg
    11641 cgctggcgtc cagcccgacc cataaatccg atctggcagt tgcaggtgcg gtagtcatcg
    11701 catgggcgat ttctcgtgcc attgacggag aaatctggtc agcaattgtt gattcactgc
    11761 cttcaattgc gcgacatgca cagcaaaaac gcatcactac cttcagcgcc tcactggcag
    11821 cacgtctgga gattgcgctg aaaattgtgc gcaatgccga cggcaccgaa tccgccagcg
    11881 aacagcttta ccaggtcgtt ggcgcaggta ccagcactat tgagtccgtt ccgtgcgcca
    11941 ttgcgctagt tgaactggca caaaccgacc caaaccgctg cgccgtcctg tgcgccaatc
    12001 ttggcggcga cacagacacc ataggtgcta tggcgacggc gatttgcggc gcgttgcatg
    12061 gcattaacgc tgtcgatcct gcattaaagg cggaactgga tgcggtaaat cagcttgatt
    12121 tcaaccgcta tgccatagcg ctggcgaagt atcgccaaca acgggaggcg gtatgagcgg
    12181 cgctcgatta cacacgctgc tgcctgaatt aactacgcgt cagccggtta tggtgattgg
    12241 cgcggcggtc attgatgtga tcgccgacgc ctacgccctg ccctggcgcg ggtgcgatat
    12301 cgaactgaaa cagcagagcg ttaacgttgg cggctgcgca ctgaatattg ccgtggcgtt
    12361 aaagcgcctc ggcatcgaag ctggcaatgc cctgccgctc ggccaggggg tgtgggcgga
    12421 gattattcgc aaccggatgg cgaaagaagg attaatcagc ctgatcgata acgccgaagg
    12481 tgataacggc tggtgtctgg cgctggttga gccggatggc gaacgcactt ttatgtcatt
    12541 cagcggtgtg gaaaatcagt ggaatcgcca gtggctggcg cgattaaccg ttgcgcctgg
    12601 cagcctgctc tatttttccg gttatcaact ggcctcgccc tgcggcgaat tgttagtgga
    12661 atggctggaa gagctgcaag acgtgacgcc gtttatcgat tttggcccac gtattggcga
    12721 tatcccggat gcattactgg cgcggatcat ggcctgtcga cctttagtgt cactcaatcg
    12781 tcaagaggct gagattgccg ccgaacgttt tgctttatcc gcagagataa caacacttgg
    12841 cgagcaatgg caggagaaat ttgccgcgcc gttgatcgtt cgtctcgata aagaaggcgc
    12901 atggtatttc agcaacgacg cttctggctg cattccggca tttccaacgc aagttgtaga
    12961 caccattggg gcgggcgaca gtcatgcagg tggcgtactt gccgggctgg cctctggtct
    13021 gccactggcg gatgccgtat tactgggcaa tgcagtggcg tcgtgggttg tcaggcatcg
    13081 gggcggtgat tgtgcgccaa cgcgcgagga actactcctc gcacacaaaa acgtatagat
    13141 cgctgcgaca gtggctaatg ttgtactcaa taggccgttg ctgttggtca agcgccactt
    13201 gcttgatcac cagcaccggt attttgctat ctaactgaat atgtgactga aactcggcat
    13261 ccggcatccg ggcgctaacg cgggaacgcg tacgttgtgg gtaaatgtgc tggctgcgga
    13321 aatagtcata aagtgaaatc ccgatggcat caacatcatg aattaaatgc gccggaaccc
    13381 acgattcctc aatcgatacc gcttcttcat cgacatagcg aatacgctta agcaaaaaga
    13441 catcacttcc tgcttcgacc gccagctgct gcgcgacttc ttcgggacat ttcacgacac
    13501 gcttgttaac ccatagcgta tcgggctttt tcccgcgcaa taccacctgc tgagaaaaac
    13561 ctcgcgcttc tttcaacgag tattcgaaga tgttgttgat ctgcgtgccg taaccacgcg
    13621 aacgcgtcac cacaccctct tcttccagcg cctgcatcgc cttgcgcacc gtaatgcgcg
    13681 aaacgccggt taactgactt aaatcacgct caccgggcaa aatattgcca tgctccagca
    13741 ccccgctgcg cacggcattt tttaccgttt cggcaaactt aatataaagc ggcgtgttat
    13801 ccgccgctaa tatacgctcg ttcagttggg caatcagctg ggtatgcgct tgttccattt
    13861 gtctttttcc tgccagggag tcttgtggga gtatatcact gcttcttatt taaggcgttt
    13921 ctttaatccc atcaacgaat gcctgcaact cctccaccgt gccattaaat acattaaaat
    13981 ccaccggacc attgatgcca tctacctgtc cacggtcgga atgctgccag aagcgccagg
    14041 ccattccgtc attgtccgga cgacgttgat aatagtgagc cacccaccac ggatattcat
    14101 taaaatagcc cgccagattc gtgtgataaa aaacggctcc tgagtaaata atcggctttt
    14161 ttcccgtgcg tttttctacc atttttagcc actgacttac ccgcttgcgt aattcttttg
    14221 ccgataattt tccccgttct tctacgtcca gtaccgcagg gaaatcgcct tgtgaaaaat
    14281 ccaccgtttg cagaaataat cgcgcctgaa ctgaagcgga taccgacggg gagaaataat
    14341 gatacgcccc gcgcagcagg ccattttcgc ggcttaattg ccagttacgc gaaaaatagg
    14401 ggtccaccag cttttcgcct tccgtagcct taataaaagc aaactgtaag cggatatcgt
    14461 tgtcgcgcat ttttgccacc cgctgccagt cgatacgctc ctgccagcgc gaaacatcta
    14521 atccgtgaat ggtgtaactg gcaggaatgc gaatagcgaa agatttaacc gggcgataac
    14581 cgtagaagtg gatgtagtct gtaatctgaa ctgctgtcga atagaaaaaa ttcaccgtct
    14641 gacgcggata aattgcaacg atggaaatta gcccaagagc gcataataga gcggtgagtt
    14701 tttttcgact ggtaattctt agctgcattg gtttcatccc tgaatgtcag tgccaaaggc
    14761 tgacaataac caaagcagct atagtacggt gctcaccacc aggcgtggaa gtggtgaacc
    14821 ggaccaatac cgtgaccaac ttccagcgtg tcggcctggg ctaacgccga tgaaagccag
    14881 ctttttgcct cctgtacggt gtcagcccag tttgtatggc gcgggcgtag tgcagccaac
    14941 gccgcagaga gtgtacaacc agtgccgtgg gtgtttttgg tcataatgcg cggtgcggta
    15001 aaccgttgtt caccctcgcg ggtaaacagc cagtccgggc tttgctcatc atccagatga
    15061 ccacctttca ttagcactgc gccacagccc atcgccaaca gcgatcgccc ttgttccagc
    15121 atttcctgtt cggtgcgcgc gtgtggcgcg tcgagcaagg cggctgcttc gggcaagttt
    15181 ggcgttatta atgaaacctg tggcaataat cgactgcgca gcgtagcaac cgccgaaggt
    15241 gaaagcagcg ggtcgccgct ttttgccagc ataacggtgt cgagtaccac gttttggatc
    15301 tgataacgtt gcaaccgttc tgccaccgct tcaacaatat cggtttccgc caacataccg
    15361 attttagtgg tatcgattcg cacatcgctg aacaccgaat cgagctgggc ggcgacaaaa
    15421 tcaggctcaa tgcgatacac cgactgtacg ccacgggtat tttgcgccac cagtacagta
    15481 ataactgagc aaccataagc gccaagtgcc gagaaggttt taagatcggc ctgaatcccc
    15541 gcaccaccac tcggatcagt accggcaatc gtcagagcgt taattcgttt catgcctgca
    15601 cctcctgcgt caattgccag agcgcatcaa ggaaatgtgg aacaaaactg cctggcccct
    15661 cgcttctggc gactgcgcgt tctccggctt gtttcatcca gtgacaggca gatgcgacat
    15721 tttccagcat atcgcctggt aacgcacaac aggcaacgac aaccgccgat aatgcacagc
    15781 cagttcctac cactttggtc attaacggat cgccaccgtg aataccaatg atacgatgtc
    15841 catcggtaac ataatccacc tcgccagtga ccacgacgat tgcgccagtt tcccgtgcca
    15901 gtgtttgtgc agcgggtatc gcgttagctg cggcgtcagt ggtatccact ccccgtccgc
    15961 cattagcaac gccagctaat gccatgattt ccgaagcatt accacgtatc gctgccggtt
    16021 taaaagataa aagttcatga caaaaatggc ggcgataatc gagcgcacca accgctactg
    16081 gatcaagcgt ccagggtgtt tgagagcttt ttgcttgctc aacggcagca cgcatcgcct
    16141 gtgcgcgtgg ctgcgtcagt gtgccaacgt taatcaacaa ggcactggcg atagccgcaa
    16201 actgactggc ctcttcggtt tcgataacca tcgctggcga tgcaccgagc gccagcaagg
    16261 tattggcagt aaaggtttgc accacatcgt tggtcatgca gtgcacaaga ggggaatgtt
    16321 ggtgaaaaag gtgtaacgtg tgcgcagatt gcacggaact cagcaggtcg acttgcatag
    16381 tttgctcctg ccataacgtg aagaagcaat gacctggtgg tccgtgactt ccctacgctg
    16441 gcattatcca gatcaggtga tacgggtatt tctcagcctt cacgcagaag ggcaccccga
    16501 gtcgtttggt tgcgatgata aatcgcagag gaggatggta atgtccagcg cacccgttgt
    16561 aaacgaggaa aaacggcagt tttacaatcg cgttaataaa ttatttgata tatgaatcca
    16621 gcaccttcag aacgacatcc agatcttctt cacgttttag ctcatcctcc tggtgaacga
    16681 tgtgttccgt cagatgacct ttaatcactt cccgcatcag accgtttacc gcgccacgga
    16741 tagcagcaat ctgttgtaaa actgcagcgc attcgtgcgg ctcgtcgagc attttcttga
    16801 gcgccacgac ctggccctga atcttactgg cacgcgcttt cagtttctgt ttatcacgga
    16861 ttgtatgaga catggcaaca cctggttaac aagaatatga aaaatcatag cactattaat
    16921 ctactggggg gtagtatcaa gtgctggggg ggagtagaat cagattgccg aattaatact
    16981 aagaattatt atcatgaccg aatttacaac tcttcttcag caaggaaacg cctggttctt
    17041 catcccctgc gccatcttac ttggtgcgct tcatggcctg gaaccagggc actcaaaaac
    17101 gatgatggcg gcgtttatca tcgccatcaa aggcaccatt aaacaggcgg tgatgctcgg
    17161 actggcagca accatttcgc ataccgcggt ggtctggttg attgcctttg gcgggatggt
    17221 gatcagtaag cgctttactg ctcaatcagc agaaccgtgg ctccagctga tttccgcagt
    17281 gatcattatt ggcaccgcat tctggatgtt ctggcgtacc tggcgcggcg agcgcaactg
    17341 gctggagaat atgcacgggc atgattatga gcatcaccat catcacgatc acgaacatca
    17401 ccacgaccat ggacatcatc accatcacga acatggcgag tatcaggatg cccatgcacg
    17461 agcccatgcc aatgacatta aacgacgctt tgatggtaga gaggtcacca actggcaaat
    17521 tttgttattt ggcttaaccg gtggccttat cccctgcccg gcagcaatta ccgtgctgtt
    17581 gatatgcatt cagttgaaag ccctgacact gggcgcaaca ctggtcgtca gtttcagcat
    17641 tggcctggcg ttaacgcttg tcaccgtagg cgttggcgca gcaatcagcg ttcagcaggt
    17701 cgcaaaacgc tggagcggat ttaacactct cgctaaacgc gccccctatt tttccagtct
    17761 gttgattggc ttagtcggtg tgtatatggg cgtacatggc ttcatgggca taatgtgata
    17821 actcaatcct ttaggcttgc atgttatctt cagcccagga tgattcttaa atcagctatt
    17881 tccgctgact ctctgctcgc taaggatgct tttagggcat cctttcattt atacttttta
    17941 cgaaatcatg ggatcactaa caaaatatcg cttgtcagtt atattgtatg gcaggaaaga
    18001 tatgcgactg atattacaga tccccaaagt ggagagttta tgaccattaa aaataagatg
    18061 ttactgggtg cgcttttgct ggttaccagt gccgcctggg ccgcaccagc caccgcgggt
    18121 tcgaccaata cctcgggaat ttctaagtat gagttaagca gtttcattgc tgactttaag
    18181 catttcaaac caggcgatac cgtcccagag atgtaccgca ccgatgagta caacattaag
    18241 cagtggcagt tacgtaacct gcccgcgcct gatgccggga cgcactggac ctatatgggt
    18301 ggcgcgtacg tgttgatcag cgacaccgac ggtaaaatca ttaaagccta cgacggtgag
    18361 attttttatc atcgctaaaa aaagccccct catcatgagg gggaaatgca gacaccttgt
    18421 tattttttat tattagccac ttgctcgtct tgcttgttat tagtcgtatt tcacgttgat
    18481 taatgcggtt gcctccagtg cgccagattt aactttgttt gtatcgtaga cgtagtaact
    18541 ggcagttatc ggaattgaaa ccgttgtatc tgtaattttt gacttcgccg caatttcttt
    18601 taaatttgtg tatcctttac tgctgttagt gatatttaaa agtgtgactg gcgaactatt
    18661 actttcaaga ataaatccta cgccattatc ttccgcacct ttcagtattg tgttgctgtt
    18721 ggttaacaag tcagaacttg ataaatacac ctgcattttc cgtgatgttt gattttgttg
    18781 acctaataaa tttttacaac gcagaataat atccccttgt ttactattta ttgttgcttt
    18841 gttacctgtg gctggtaatt gtgaaacggg aatactgtct aaaataatta ataaatcgtc
    18901 cggtttgcag gttgtggtta tcgggttgta tgacaatgtc agattaaagg aatagacacc
    18961 tgcattttgt gccaatgcat ttctgtagct atttacacat gcatcccatg acttgccacc
    19021 taataaacac agtagaaatt gtactgcggc actcccgcgt gtcgatgatg aagcactgga
    19081 taatgtcgca acaccattaa tcatcactga accgccgccc cccgcagaaa cattcacttt
    19141 tgcattactc gccgcaggtg tcaccgtaac tgaataacca ctggtgaaac tggtctgatt
    19201 atttgacaac gtgatgttgt ttttattggt ccattcaaaa cgtaaattta attttatggt
    19261 atcgttataa agtccaacaa taatatccga cgggctcata ggggtgatag tatttgtact
    19321 cacgcatgac gaatcattaa aattatgctc atatgtcgcc atttgtgttt gagtaagtgc
    19381 aaaatccccc tgaacaacca agttgtgctg aacagataac tcactataac atgccgcata
    19441 gctcacaggc ataaccatca tcattaatat aaatagcatt atgcgaattt ccatagaacc
    19501 acctgactat tactggcaaa tataatttct actttcatca atctctttac cgaaggtgat
    19561 tgtgcatgaa agtccttgtt gcttatcaat tgccacatta accgatggcg gtacttcatt
    19621 ggtgcgaata aataactggc ttccctggcc gacaacgcca atattatgac catggatatc
    19681 attgacttca taaccaaaca ttaatggttg accatccgct cttaacgctt ttataaacca
    19741 gggcttgcgc tgatcggtat caaaattaac ccgtacaacc gcgccgcgat aaagggcggc
    19801 aattttccgg ttgccacgta attctgcttc gctatcgctt tgcgacacat ccagcatcag
    19861 gtgattttcc cgataaggtg tcattccgtc gtatatcacc actccattac ggtttgttgt
    19921 gcgatatttt tgcccattga cataagcatc tttaattcct agcgcattca tcacagcaaa
    19981 cgtttcggaa agacggttcg ccagattaac gccacccgac caggagacaa tgccccctga
    20041 aacactggct ccagcctgtc gataagtact cgactgacta taactgccat tcactgtcgc
    20101 aaccggcgcg ttccaggtca aattcgcccc agctgtcgtt tcatttccct gatgctgata
    20161 actcaggttg accccatagt taaactgatc ccggcttccg acggttcctg ataatcccgt
    20221 attatttgag gcaaacccct gatcatcaaa cgtcgttgag ttagacatat atatttgccg
    20281 acgaggcgtc gtaacgtcat caccccaatc aaagggaatc gatataaaaa tattaaaacg
    20341 tttctcttca tgatgattct cgtcatacgc ctggcttgcc gcgagggtat agcttatccg
    20401 ccgccagtta ttggaataac tcaactgata atccttactg ctgccgctac gcccccagta
    20461 atctcgccat aacgtactta aggacacaga cccccagcct tctggcaatg actggctcat
    20521 attggcagaa aagctatttt tacggccaaa atcgttctgg taataatcgg caatgtcata
    20581 gatatcgttt tcatcacggc gataattatc tttattgttt gcccaaacgt gatcattaaa
    20641 tgtccggtaa tcacgcgatg aataacgcca ggccgcaaga ccaaaacgcg tcgacgtttg
    20701 gctcacaaat ttgttgtagg caatttgata actttgcccg tcaaacacat cgccgttgtc
    20761 ttgtttacta tgcgacttcg tggcatcgac ggaaatggca ccaatgcgtg tattccagcc
    20821 agtccccaaa gtaaacgcgt aataattatt cgcgaccatc gagccaccat acagcgtcaa
    20881 taaattatta aaaccatact gataacccgc ctggacaaaa tcactttgtt tgctcgcccc
    20941 ttcaatatgg ctacgacccg ccgcaaaatc ataattcgac acgccgggtt gcagcatatt
    21001 tggcaccgct gcataaggca ccagataggt ggttaccgag ccgtccgcct ctttcacgct
    21061 gacatcaaga tctgctccac caccggccaa ctgcaaatct gtaatcgcga acgggccagg
    21121 aggaacctct ttctgataaa cgacaaaacc gttctgttca atagttacca gcgcgttact
    21181 ctgagcaatc ccctgcaccc gtggcgtaaa attttgtttc gagttaggca acatctgcat
    21241 atcacgaaac aaccgcacac cgctgaagcg aacagaatca aaaatatcgc ttgatgtgta
    21301 catatcaccc acgcgaagcg tgccgagaag ttgggcaaat ccacgttcca gatacagggt
    21361 attacttttc caca
//
LOCUS       DAJVTL010000073        21237 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.073, whole genome shotgun sequence.
ACCESSION   DAJVTL010000073 DAJVTL010000000
VERSION     DAJVTL010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 21237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21237
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.073"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            222..263
                     /locus_tag="OQQ26_002579"
     CDS             222..263
                     /locus_tag="OQQ26_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1857999.1"
                     /translation="MVQLVDLARCVSF"
     gene            301..1683
                     /gene="dosC"
                     /locus_tag="OQQ26_002580"
                     /pseudo
     CDS             301..1683
                     /gene="dosC"
                     /locus_tag="OQQ26_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310122.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DosC"
     gene            1708..4104
                     /gene="dosP"
                     /locus_tag="OQQ26_002581"
                     /gene_synonym="pdeO"
     CDS             1708..4104
                     /gene="dosP"
                     /locus_tag="OQQ26_002581"
                     /gene_synonym="pdeO"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-sensing cyclic-di-GMP phosphodiesterase"
                     /protein_id="HCS1858000.1"
                     /translation="MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL
                     WGYKREEVIGNNIDMLIPRDWRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW
                     TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ
                     CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT
                     GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE
                     IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEVQNAQSWSATIRQRDGAPAGIL
                     QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN
                     YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRI
                     EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDVGKNRYLL
                     STAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFA
                     ETGELYGIEALARWHDPQHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQ
                     NIHIPALSVNLSALHFRSNQLPNQVSDAMQAWGIDGHQLTVEITESMMMEHDTEIFKR
                     IQILRDMGVGLSVDDFGTDFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAIT
                     SIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI
                     "
     gene            4362..4883
                     /gene="ddpX"
                     /locus_tag="OQQ26_002582"
     CDS             4362..4883
                     /gene="ddpX"
                     /locus_tag="OQQ26_002582"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HCS1858001.1"
                     /translation="MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK
                     DAITALAKSISIVQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT
                     AIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
                     SEWWHFELPLAAS"
     gene            4957..6507
                     /locus_tag="OQQ26_002583"
     CDS             4957..6507
                     /locus_tag="OQQ26_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1858002.1"
                     /translation="MKRSISFRPTLLALVLATTFPVAHAAVPKDMLVIGKAADPQTLD
                     PAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASGWKASDDQKEWTFTLKDN
                     AKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFL
                     YTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYP
                     GNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLR
                     VTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATA
                     MQYNHDETKAKAEWDKVTSKPTSLTFLYSDNDPNWEPIALATQSSLNKLGINVKLEKL
                     ANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL
                     LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQV
                     FNINTMSK"
     gene            6509..7531
                     /locus_tag="OQQ26_002584"
                     /pseudo
     CDS             6509..7531
                     /locus_tag="OQQ26_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416003.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            7528..8043
                     /locus_tag="OQQ26_002585"
     CDS             7528..8043
                     /locus_tag="OQQ26_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005011069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1858003.1"
                     /translation="MMLSEETSAVRPAKQTRFNGAKLVWMLKGSPLTVTGAVIIVLML
                     LMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV
                     VVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAATDGQLLRTS
                     GADFTAGRRCS"
     gene            7979..8791
                     /locus_tag="OQQ26_002586"
                     /pseudo
     CDS             7979..8791
                     /locus_tag="OQQ26_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416001.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            8784..9710
                     /locus_tag="OQQ26_002587"
     CDS             8784..9710
                     /locus_tag="OQQ26_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1858004.1"
                     /translation="MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET
                     LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
                     ITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
                     PDVIVLDEPTSALDISVQAQLLNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL
                     GQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF
                     YERCPLATHGCEVRQSLAIREDGREIRCWRAL"
     gene            complement(9766..10190)
                     /gene="osmC"
                     /locus_tag="OQQ26_002588"
                     /pseudo
     CDS             complement(9766..10190)
                     /gene="osmC"
                     /locus_tag="OQQ26_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415999.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin OsmC"
     gene            10534..10749
                     /gene="bdm"
                     /locus_tag="OQQ26_002589"
     CDS             10534..10749
                     /gene="bdm"
                     /locus_tag="OQQ26_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310112.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HCS1858005.1"
                     /translation="MFTYYQTENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            10851..10988
                     /gene="sra"
                     /locus_tag="OQQ26_002590"
     CDS             10851..10988
                     /gene="sra"
                     /locus_tag="OQQ26_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HCS1858006.1"
                     /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE
                     K"
     gene            11145..12842
                     /gene="maeA"
                     /locus_tag="OQQ26_002591"
     CDS             11145..12842
                     /gene="maeA"
                     /locus_tag="OQQ26_002591"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HCS1858007.1"
                     /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
                     LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
                     IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
                     TDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
                     VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFM
                     VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
                     WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
                     LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
     gene            12976..13986
                     /gene="adhP"
                     /locus_tag="OQQ26_002592"
     CDS             12976..13986
                     /gene="adhP"
                     /locus_tag="OQQ26_002592"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HCS1858008.1"
                     /translation="MKAAVVTKDHHVDVTDKTLRSLKHGEALLKMECCGVCHTDLHVK
                     NGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETL
                     CRSVKNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIR
                     PGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMGADLAINSRTEDA
                     AQIVQEKTGGAHAAVVTAVAKAAFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDG
                     IEVVGSLVGTRQDLTEAFQFAAEGKVVPKVALRPLADINTIFTEMEEGKIRGRMVIDF
                     RH"
     gene            14132..14416
                     /locus_tag="OQQ26_002593"
     CDS             14132..14416
                     /locus_tag="OQQ26_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310108.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HCS1858009.1"
                     /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG
                     KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLAAQ"
     gene            complement(14644..15297)
                     /gene="fdnI"
                     /locus_tag="OQQ26_002594"
     CDS             complement(14644..15297)
                     /gene="fdnI"
                     /locus_tag="OQQ26_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit gamma"
                     /protein_id="HCS1858010.1"
                     /translation="MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLT
                     QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDQKDIPWLLNIVEVLKGNEHK
                     VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
                     ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
     gene            complement(15290..16174)
                     /gene="fdnH"
                     /locus_tag="OQQ26_002595"
     CDS             complement(15290..16174)
                     /gene="fdnH"
                     /locus_tag="OQQ26_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase N subunit beta"
                     /protein_id="HCS1858011.1"
                     /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
                     CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
                     CEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCTAGCPFNIPRLNKEDNRVYKC
                     TLCVDRVSVGLEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG
                     VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFMATFAGLIFHY
                     IGIGPNKEVDDDEEDHHE"
     gene            complement(16187..19234)
                     /gene="fdnG"
                     /locus_tag="OQQ26_002596"
     CDS             complement(16187..19234)
                     /gene="fdnG"
                     /locus_tag="OQQ26_002596"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(18647..18649),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HCS1858012.1"
                     /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
                     EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
                     NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
                     TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIR
                     SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
                     KSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE
                     VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSL
                     MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
                     NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
                     SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
                     KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
                     GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
                     QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
                     LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
                     QPEQFVEISETLAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
                     PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
     gene            19466..20346
                     /gene="yddG"
                     /locus_tag="OQQ26_002597"
                     /pseudo
     CDS             19466..20346
                     /gene="yddG"
                     /locus_tag="OQQ26_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415990.5"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid efflux DMT transporter YddG"
     gene            20605..>21237
                     /locus_tag="OQQ26_002598"
     CDS             20605..>21237
                     /locus_tag="OQQ26_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HCS1858013.1"
                     /translation="MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYF
                     TDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGNKTRLAYAG
                     LKISEFGSLDYGRNYGVGYDIGSWTDMLPEFGGDTWSQKDVFMTYRTTGVATYRNYDF
                     FGLIEGLNFAVQYQGKNERTDNSHLYGADYTRANGDGFGISSTYVYDGFGI"
BASE COUNT         5281 a         5362 c         5340 g         5254 t
ORIGIN      
        1 tcatgcttac taaagtcaaa ttaaccacgc aattaactac acttagttaa acaaccataa
       61 atcccctaat aaaaatgtat gaatatgaaa aaacatacga tattcgctgt caccgaaaaa
      121 taattacgat gggctatact cttctgaaga acagtagcgt agattgaaac tgtcctaaat
      181 tgcttatttc ttttcagtat atcttcatat ttcaggagaa tatggtgcag ttagtcgatc
      241 tcgcacgttg cgtttcgttt tgattccgtc tgatttccca gccttataag ggtgtgaatt
      301 atggagatgt attttaaaag aatgaaagat gagtggaccg gacttgtcga acaggcagat
      361 ccgcccattc gtgctaaagc cgcggaaatt gccgttgcgc atgctcatta tctgagtatt
      421 gagttttatc gaattgtccg catcgacccg catgccgaag aattcttgag taatgaacaa
      481 gttgagcggc agttgaaaag tgcgatggag cgctggatta ttaacgtgct ttctgcccaa
      541 gttgacgatg tcgaaaggct aatacaaatc cagcataccg tcgcggaagt gcatgcccgc
      601 ataggaattc cggtagaaat tgtcgagatg gggtttcggg tgctgaaaaa aatcctctat
      661 ccggtaatct tctcttcgaa ttattccgcc gcagaaaaac ttcaggtcta ccatttctcg
      721 attaacagta ttgatatcgc gatggaagtg atgacccgcg cgtttacctt tagtgacagt
      781 agtgcctcaa aggaagatga aaactatcgt atcttctcgt tactggaaaa cgccgaagaa
      841 gaaaaagaac ggcaaatagc ctcaatactt tcatgggaaa tagatattat ctataaaatc
      901 ctgctggatt ctgatttagg cagtagtttg cctttaagcc aggctgattt tggcctgtgg
      961 tttaaccata aaggtcgaca ttattttagt ggcattgccg aagtaggcca tatctcccgt
     1021 ctgattcagg atttcgacgg tattttcaat caaaccatgc gtaacaccag gaatttgaat
     1081 aacagaagtc tgcgggtgaa atttttatta cagataagaa ataccgtatc gcaaattatt
     1141 accttgctgc gtgaattgtt tgaagaagta tcgcgccacg aagtcggtat ggatgtactg
     1201 acgaaattac ttaaccgccg tttcctgccg actatcttca aacgcgaaat tgcccatgcc
     1261 aaccggaccg gtacaccgct gtcagtgctg attattgacg ttgataaatt caaagagatc
     1321 aacgatacgt gaggccataa cactggcgat gaaattctgc gtaaagtctc tcaggccttt
     1381 tatgacaacg tccgcagtag tgattatgtt ttccgctacg ggggcgatga atttatcatt
     1441 gttttgactg aagcttctga aaacgaaacg ttacgtaccg cagaacgtat tcgcagtcgg
     1501 gtggagaaaa ccaaactgaa agccgcaaac ggcgaggata ttgccctctc actttccatc
     1561 ggtgccgcta tgtttaatgg tcatcctgac tatgagcgcc tcattcaaat agccgatgaa
     1621 gctctgtata tcgccaaaag acgaggtaga aaccgtgttg aactctggaa agccagtctt
     1681 tagatgcgcc aggatgcaga ggtaatcatg aagctaaccg atgcggataa tgccgccgat
     1741 ggcatttttt tccccgccct tgagcaaaat atgatgggtg cggtgttaat taacgaaaat
     1801 gatgaagtga tgtttttcaa ccccgccgca gagaagctct gggggtacaa acgtgaagaa
     1861 gtcattggca ataacattga tatgctgatt ccgcgggatt ggcgtcctgc gcatcctgaa
     1921 tacattcgtc acaaccgtga aggcggtaaa gcgcgtgttg aggggatgag tcgggagctg
     1981 cagctggaga aaaaagacgg cagtaaaatc tggacccgtt ttgcgctatc gaaagtgagc
     2041 gccgagggga aagtttatta cctggcgctg gtacgggatg ccagcgtaga aatggcgcaa
     2101 aaagaacaga cccgacaatt gattattgcc gttgaccatc tcgaccgacc ggtgattgtc
     2161 ctcgatccgg aacgccatat tgtgcagtgc aatcgcgcat ttaccgaaat gtttggttac
     2221 tgcattagcg aagccagcgg tatgcagccc gatacactcc tgaacattcc tgaattccct
     2281 gccgataacc gcattcgttt acaacagttg ctatggaaaa ccgcccgcga tcaggacgaa
     2341 tttctgctgt tgacgcgcac cggtgaaaaa atctggatta aagcctctat cagcccggtt
     2401 tatgacgtgc tcgcgcatct gcagaacctg gtaatgactt tctcggatat caccgaagaa
     2461 cggcagatcc gccagcttga aggcaatatt ctcgccgcca tgtgcagcag cccgccattt
     2521 catgaaatgg gggaaatcat ttgtcgtaac atcgaatctg ttctcaacga atcgcatgtt
     2581 tcgctgttcg cactgcgcaa cgggatgccg atacactggg cgtcatcttc gcacggtgca
     2641 gaagttcaaa atgcgcaaag ctggtcagcg accattcgtc agcgtgatgg tgcgcctgca
     2701 gggatcctgc aaattaaaac ctcgtcagga gcagaaacca gcgcctttat cgaacgcgtg
     2761 gcagatatca gccagcatat ggccgcgctg gcgctggaac aggaaaaaag ccgtcagcat
     2821 attgaacaac tcatccaatt tgatccgatg accggtctgc caaatcgcaa taacctgcac
     2881 aattacctcg atgacctggt cgacaaagcc gtctctccgg tggtgtatct catcggtgtt
     2941 gaccatattc aggatgtgat tgatagcctt ggctatgcgt gggccgatca ggcattgctg
     3001 gaagtggtca atcgctttcg tgaaaaactc aaaccggatc agtatctctg tcgtatcgaa
     3061 ggtacgcagt ttgtcctcgt gagcctcgaa aacgacgtca gtaacattac ccagatcgcc
     3121 gatgagctac ggaatgtggt cagcaagccg ataatgattg acgacaaacc cttcccgctt
     3181 accttgagta ttggcatcag ctacgacgtg ggtaaaaacc gctacctgct ctccactgcc
     3241 cataacgcga tggattatat tcgcaagaat ggcggtaacg gctggcagtt cttcagcccg
     3301 gcgatgaacg aaatggtaaa agagcgtttg gttttaggcg cagcgctgaa agaagcgatt
     3361 agcaataacc aactgaaact ggtttaccag ccgcaaatct tcgcagaaac gggtgaactc
     3421 tacggcatcg aagcccttgc tcgctggcac gatccccagc atggtcatgt gcccccttca
     3481 cggtttattc ctctcgcaga agagattggt gaaatcgaaa atattgggcg ctgggtcatc
     3541 gcggaagctt gccgtcagtt agcagaatgg cgtagccaga atattcatat cccggcgtta
     3601 tccgttaact tgtcggcgct gcactttcgc agtaatcagc tgcctaatca ggtgtctgat
     3661 gcaatgcaag cctggggtat tgacggccac cagctgacgg tagaaatcac ggaaagcatg
     3721 atgatggaac acgataccga aatatttaag cgcattcaga tcctgcgtga tatgggcgtg
     3781 ggtttatcgg tagatgattt tggcacggac ttttccggat tatcccgctt agtcagtctt
     3841 ccggtaacgg aaatcaaaat tgacaaaagt tttgtcgatc gttgtctgac ggaaaaacgc
     3901 atccttgcct tacttgaagc cattaccagc attgggcaaa gcctcaattt aaccgtcgtg
     3961 gcggaaggcg tcgaaaccaa agagcaattt gagatgctac gcaagatcca ctgtcgcgtt
     4021 attcagggat atttcttttc ccgcccccta cccgccgaag aaattccagg ctggatgagc
     4081 agcgtgttac cgctgaaaat ctgacaaatt cctctcgccc gcactcgcgg gttttcattt
     4141 aacgtgacac tgtcacttaa atactgtgat ttcagctacg attccgggag attccttcct
     4201 taacttcccc tcttgcacca aaactgcact acgctgcaca aatgttgatc aaaagttaaa
     4261 aaatataact ttaagccagc attctggcgc ttatcccggc atggcatgaa atctgcataa
     4321 gcggaaagcg cagcaatttt tgtcttatac aggaaccgct tatgtcggat accaccgaac
     4381 tggttgattt agccgtgatc ttccctgatc tggagatcga attgaaatac gcctgcgctg
     4441 ataacatcac aggtaaagct atttaccagc aagcgcgttg tctgttacac aaggatgcga
     4501 ttaccgcgct ggcgaaaagt atcagtatcg tccagctctc aggcttacaa ctggtgattt
     4561 acgacgcgta tcgcccacaa caagcacagg cgatgttgtg gcaagcctgc ccagacccgc
     4621 aatatgttgt tgatgtgacg gtcggttcta atcacagccg tggcacggcg atcgacctga
     4681 cgcttcgtga tgagcacggg aacatcctcg atatgggcgc agggttcgat gaaatgcacg
     4741 aacgttccca tgcttaccat ccttccgtcc cgcccgccgc tcagcgcaat cggctgttgc
     4801 tgaatgcgat tatgactggt ggcggttttg tcggtatctc cagcgaatgg tggcacttcg
     4861 aattacccct ggcagcgagt taacctctgc tcgctgatca attcacctgt tttatatccc
     4921 ctggcacaca gcacgtcagt taatcaggaa actgtcatga agagatcgat atcgtttcgt
     4981 cccacattgc tcgcgctcgt ccttgccaca actttcccgg ttgcgcacgc cgccgtaccg
     5041 aaagatatgc tggtgattgg taaggccgcc gatccacaaa ccctcgaccc ggcggtaaca
     5101 atagataata acgactggac ggtgacctac ccgtcttatc agcggctggt tcagtacaaa
     5161 acggacggtg ataaaggctc aaccgacgtt gaaggcgatc tggcgagtgg ctggaaagcg
     5221 tctgacgatc aaaaagagtg gacgttcacc ctgaaggaca atgctaaatt tgccgatggc
     5281 acacccgtca ctgccgaagc agtaaaactc tcttttgagc ggttactaaa aatcggccag
     5341 gggccagcag aagcatttcc caaagattta aagattgatg ctcccgacga acatacggtg
     5401 aagtttaccc ttagccaacc attcgcaccg ttcctctaca cgctggcgaa tgacggtgca
     5461 tccattatca atccggcggt cttaaaggaa catgcagcgg atgatgctcg cggcttcctc
     5521 gcgcaaaata ccgccggttc cggaccattt atgctgaaaa gctggcaaaa aggtcagcaa
     5581 ttagttctgg tgccaaatcc gcattacccc ggcaataaac cgaactttaa gcgagtatcg
     5641 gtaaaaatta tcggtgaaag tgcctcccgt cgcctgcagc tctcccgtgg cgacattgac
     5701 attgccgatg cgctgccggt ggatcaactc aacgccctga agcaggaaaa taaagtcaat
     5761 gtggcagagt atccgtcact gcgcgtcacc tatctgtatc tgaataacag caaagcgcca
     5821 cttaatcagg cggatctgcg tcgggccatt tcctggtcta ccgattatca gggaatggtt
     5881 aacggcattc tgagtggtaa cggaaaacag atgcgcggcc cgattccgga aggcatgtgg
     5941 ggctacgatg cgacggcaat gcaatacaac catgacgaaa cgaaagccaa agccgaatgg
     6001 gataaagtga cgagcaaacc caccagcctg acgtttctct attctgataa tgatccgaac
     6061 tgggagccta ttgctctggc gacacaatcc agtctcaaca agctgggcat caatgtgaag
     6121 ctggaaaagc tggcgaacgc caccatgcgc gacagagtgg gtaaaggtga ttacgacatt
     6181 gcgattggca actggagtcc ggattttgcc gacccgtata tgtttatgaa ttactggttt
     6241 gagtcagaca aaaaaggtct gccgggtaac cgctcgttct atgaaaacag tgaggtcgat
     6301 aagttactgc gcaatgcgct tgcgaccacc gaccagacgc agcgtacccg ggactaccag
     6361 caagcacaga aaatcgtcat tgatgacgct gcttatgtgt acctgttcca gaaaaactac
     6421 caactggcga tgaacaaaga ggtgaaaggc tttgtgttca atcccatgct ggaacaggtc
     6481 ttcaatatca ataccatgag taaataacgt gaccttctgg agtattttac gccaacgctg
     6541 ctgggggctg gtgctcgtgg tggcgggcgt ctgcgtgatt acgtttatta tctcgcatct
     6601 gatccctggt gatccggcgc ggttactggc gggtgaccgc gccagcgatg ctatcgtgga
     6661 aaatattcgc cagcaactgg gactggacca gccactgtat gtacagtttt accgctacgt
     6721 cagcgacctg tttcatggtg acctgggaac atccattcgt accgggcgtc cggtgctgga
     6781 agagttgcgt atatttttcc cggcgacgct ggagctggct ttttgtgccc tgctgctggc
     6841 actcctgatt ggcattccgc tgggcatact ctctgctgtc tggcgaaatc gctggctgga
     6901 tcatctggtg cgaataatgg ccattaccgg aatctccaca cctgcgttct ggcttgggct
     6961 gggcgtcatt gtgctgtttt atggtcatct gcaaattctt cccggcggcg gaaggcttga
     7021 tgactggctg gatccaccaa cgcacgttac cggcttttat ctgctcgatg cgctgcttga
     7081 aggtaacggt gaagtcttct tcaatgcgct gcaacatctc atcttaccgg cattaacgct
     7141 ggcgttcgtt cacctgggaa ttgtcgctag ccagatccgc tcagcgatgc tggaacaatt
     7201 gagtgaagac tacattcgta ccgaccgggc cagcggcttg cccggctggt atatcgttct
     7261 atgttatgcg ctacccaatg cgttgatccc ctcgattacc gtattgggtc tggcgctggg
     7321 cgatttgttg tatggcgcag tgctcaccga aaccgttttt gcctagccct gaatgggtgc
     7381 atgggtagta acatcaatac aggcgctcga cttcccggca gtgatgggct ttgccgtcgt
     7441 ggtttcattt gcttatgtgc tggtcaacct ggtggtggat ttgctctatt tgtggattga
     7501 tccgcgtatc ggacgtggag gtggtgaatg atgctaagcg aggaaacgtc cgccgtacgc
     7561 ccagcaaaac aaacgcgatt taacggtgca aaactggtat ggatgcttaa aggcagtccg
     7621 ctcaccgtga ccggcgcggt catcattgta ttaatgctat tgatgatgat tttttcaccg
     7681 tggcttgcga cgcatgatcc caacgccatt gatttaaccg cccgcctttt gccgccttct
     7741 gcggcgcact ggtttggcac cgatgaagtg ggacgcgatc tgttcagccg cgtactggtc
     7801 ggcagtcagc aatcaattct cgccggatta gtggtggtcg ccattgcggg tatgattggt
     7861 tcgctactcg gatgtctatc cggtgtgctt ggcggacgcg cagacgccat catcatgcgc
     7921 atcatggaca ttatgctgtc gattccttcg ttggtactga caatggcact ggctgccgct
     7981 accgacgggc agttattgcg tacatcgggg gcagatttca ctgctgggag aagatgttct
     8041 taacgctcgg gaaaaacagc ttcgtcagtg gcgcggcgca cgagtggcga tgatctttca
     8101 ggaaccgatg accgccctca atccgacacg tcgaataggt cttcagatga tggacgtgat
     8161 ccgccatcat caaccaataa gtcgtcggga agccagagct aaagcgattg ccctgctgga
     8221 agagatgcaa atcccggatg ccgtggaagt tatgtcgcgc tatccgtttg agctttcagg
     8281 tggtatgcgc cagcgggtaa tgattgcgct ggcattctcc tgcgagccgc aattgattat
     8341 tgccgacgaa ccgactacgg cgctggacgt cacgctacag ttgcaggtac tgcgtttgct
     8401 taaacataaa gcccgcgcca gtggaactgc ggtactgttc atcagccatg atatggccgt
     8461 ggtgtcgcaa ctgtgcgata gcgtttacgt gatgtatgcc ggaagcgtaa ttgaaagcgg
     8521 cgtgacggca gacattatcc atcatccccg gcatccgtat accattggtt tgctgcaatg
     8581 cgcaccagaa catggagtac cacgccagcc attacccgcc attccaggga cggtaccaaa
     8641 cctcacccat ttgcctgacg gctgcgcttt tcgcgatcgt tgctatgcgg caggggcaca
     8701 gtgtgaaaac gtcccggcgc tgacagcgtg tggtgacaac aaccagcgct gcgcctgttg
     8761 gtatccgcag caggaggtca taagtgtctg acacgttatt aacgttacgc gacgtccata
     8821 tcaatttccc ggcccgtaaa aactggcttg gtaaaactac ggaacatgtt catgccatta
     8881 atggtattga tttacagatc cgccgtggtg aaaccttagg gatcgtcggc gagtcaggct
     8941 gcggcaaaag caccctcgca cagcttttaa tgggcatgct gcaaccgagc cacgggcagt
     9001 acatccgttc aggctcacaa cgcattatgc agatggtgtt tcaggacccg ctctcttcgc
     9061 ttaatccgcg cttaccggtg tggcgcatca tcacagaacc gctctggata gctaagcgta
     9121 gtagtgaaca acagcggcga gcgttggcag aggagttggc tgtgcaggtg ggtattcgtc
     9181 cggagtatct cgaccgcctg cctcatgcgt tctccggcgg gcagcggcaa cgcatcgcca
     9241 ttgccagagc actctcttcg cagcctgacg tgattgtgct tgatgagcca acctcggcgc
     9301 tggatatctc cgtgcaggcg cagctcctca atttactggt aacgctacag gaaaatcacg
     9361 ggctgactta tgtgctgatt tcacacaatg tctcggtgat acgtcatatg agcgatcggg
     9421 tggcggtgat gtatctcggg cagattgtag aactgggcga cgcgcaacag gtactgacgg
     9481 ctccggcaca tccatacacc cgattattgc tggattccct ccccgccatt gataaaccgc
     9541 tggaggaaga atgggcatta cgtaaaacgg atctgccggg aaaccgcacg ttgccgcaag
     9601 gctgtttttt ctacgaacgt tgccctctgg caacccacgg atgtgaagtc cggcaatcat
     9661 tagcaataag ggaggacgga cgtgagatcc ggtgctggcg ggcgctgtag agatgctaac
     9721 aacgcatcag gcattcacgc gcctgacgcg tcatccggga atgctttacg atttcaactg
     9781 gtaatcaagc gtaatttccg ctttcagtac ctgagagaca gggcatcctg cttttgcttt
     9841 ctggatgatg ccgtcaaagg tagaggcatc aatacccggc accgcaactt cactcttcag
     9901 tgcgattttc gtaatcgcaa aaccggcatc cactttatcc agcgacacat cggcggtggt
     9961 atcaatcgat gttggcgtga atcccgcttc ccccagcatt aatgaaagcg ccattgagaa
    10021 acatgcggca tgcgctgcgc caatcagttc ttcagtcctt tttcgccttc aaaacgcgtg
    10081 ttaaatccat acggctgttg gttcagcacg ccactctcgg tggatactgt tcccttcccg
    10141 cgtttgatat cgccttccca gtgtgcctga cctttcttat ggattgtcat tgttgctctc
    10201 ctgtgggctt aaaaaggaaa ttatagacta cgtgagaaac cgcacgagga taagcaggat
    10261 atccgaataa aatacggcga gaatattact tctgcactta aattaaattc ccacaataga
    10321 taaccggaaa tatatatctc aagagatatt gcatcaatat caatcaactc actacaataa
    10381 taatacatat caatatcatg gagttaaaat ataaaaatca tcaaccagga ctaatcttaa
    10441 caacgaagcg gcaaatattt accatgctga atgtgcttta taaatctgcg atccgtagca
    10501 gacaccataa atacacagac acggagaatc actatgttta cttattatca gacagaaaat
    10561 tcaacagcag aacccgctct ggttaatgcc attgagcaag gccttcgggc agagcacggt
    10621 gttgtcactg aagatgacat tctcatggag ctgaccaaat gggtggaagc ttctgataac
    10681 gacatcctca gtgatatcta ccagcaaacg atcaattatg tggtcagtgg ccagcaccct
    10741 acgctttaag gtgctatgct tgatcggcaa cctaatttag gggtttagca cgtgtttctt
    10801 cgctacggcg atgttgtcct taaaactagc aacaggattg aggagttaaa atgaaatcga
    10861 accgtcaggc acgtcatatt cttggactgg accataaaat ttctaaccag cgcaaaatag
    10921 ttaccgaagg tgacaaatcc agcgtagtaa ataacccaac cggcagaaaa cgccccgctg
    10981 aaaagtaatt cataaccatc agtcctcaat gacgattaaa caccattgcc tgcgcaatgg
    11041 tgtttttgtt tttatctgct ttatacttgg ggccgacgcc ctggcggtaa agcaaagacg
    11101 ataaaagccc cccagggatg gatattcaaa aaagagtgag tgacatggaa ccaaaaacaa
    11161 aaaaacagcg ttcgctttat atcccttacg ctggccctgt actgctggaa tttccgttgt
    11221 tgaataaagg cagtgccttc agcatggaag aacgccgtaa cttcaacctg ctggggttac
    11281 tgccggaagt ggtcgaaacc atcgaagaac aagcggaacg agcatggatc cagtatcagg
    11341 gattcaaaac cgaaatcgac aaacacatct acctgcgtaa catccaggac actaacgaaa
    11401 ccctcttcta ccgtctggta aacaatcatc ttgatgagat gatgcctgtt atttataccc
    11461 caaccgtcgg cgcagcctgt gagcgttttt ctgagatcta ccgccgttca cgcggcgtgt
    11521 ttatctctta ccagaaccgg cacaatatgg acgatattct gcaaaacgtg ccgaaccata
    11581 atattaaagt gattgtggtg actgacggtg aacgtattct ggggcttggc gaccagggca
    11641 tcggcgggat gggcattccg atcggtaaac tgtcgctcta taccgcctgt ggcggcatca
    11701 gcccggcgta tacccttccg gtggtgctgg atgtcggaac gaacaaccaa cagttgctta
    11761 acgatccgct gtatatgggc tggcgtaatc cgcgtatcac tgacgacgaa tactatgaat
    11821 tcgttgatga atttatccag gctgtgaaac aacgctggcc ggacgtgctg ttgcagtttg
    11881 aagacttcgc acaaaaaaat gcgatgccgt tacttaaccg ctatcgcaat gaaatttgtt
    11941 cttttaacga tgacattcag ggcaccgcgg cggtaacggt cggcacactg atcgcagcca
    12001 gccgcgcggc gggtggtcaa ctgagcgaga aaaagattgt cttcctcggc gcaggctctg
    12061 ctgggtgcgg gattgccgaa atgatcatcg cccagactca gcgtgaagga ttaagcgagg
    12121 aagcggcgcg gcagaaagtc tttatggttg atcgctttgg cctgctgacc gacaagatgc
    12181 cgaacctgct gcctttccag accaaactgg tgcagaaacg cgaaaacctc agtgactggg
    12241 ataccgacag cgatgtgctg tcactgctgg acgtggtgcg caatgtaaaa ccagatattc
    12301 tgattggcgt ctcaggacag accgggctgt ttacggaaga gatcatccgt gagatgcata
    12361 aacactgtcc gcgtccgatc gtgatgccgc tgtctaaccc gacgtcacgc gtggaagcca
    12421 caccgcagga cattatcgcc tggaccgaag gtaacgcgct ggtcgccact ggcagcccgt
    12481 ttaatccagt ggtatggaaa gataaaatct accctatcgc ccagtgtaac aacgccttta
    12541 ttttcccggg catcggcctg ggggttattg cttccggcgc gtcacgtatc accgatgaga
    12601 tgctgatgtc ggcaagtgaa acgcttgctc agtattcgcc gctggtcctg aacggcgaag
    12661 gtctggtact accggaactg aaagatattc agaaagtatc ccgtgcaatt gcgtttgcgg
    12721 ttggcaaaat ggcgcagcag caaggcgtgg cggtgaaaac ctctgccgaa gccctgcaac
    12781 aggccattga cgataatttc tggcaagccg aataccgcga ctaccgccgt acctccatct
    12841 aagcctgcgc ccggtagtga aggctaccgg gcaatttccc tctccctttt tcagatctca
    12901 tccatactgg gtagtggcga ataaatctca tttgcctcac ctgctatgca gaacatcatc
    12961 cgaaaaggag gaactatgaa ggctgcagtt gttacgaagg atcatcatgt tgacgttacg
    13021 gataaaacac tgcgctcact gaaacatggc gaagccctgc tgaaaatgga gtgttgtggt
    13081 gtatgtcata ccgatcttca tgttaagaat ggcgattttg gtgacaaaac cggcgtaatt
    13141 ctgggccatg aaggcatcgg tgtggtggca gaagttggcc caggtgtcac ctcattaaaa
    13201 ccaggcgatc gtgccagcgt ggcgtggttt tacgaaggat gcggtcattg cgaatactgt
    13261 aacagtggta acgaaacgct ctgccgttca gttaaaaatg ccggatacag cgttgatggc
    13321 gggatggcgg aagagtgcat cgtggtcgcc gattacgcgg taaaagtgcc agatggtctg
    13381 gactcggcgg cggccagcag cattacctgt gcgggggtca ccacctacaa agccgttaaa
    13441 ctgtcaaaaa ttcgtcccgg tcagtggatt gctatctacg gtcttggcgg tctgggtaac
    13501 ctcgccctgc aatacgcgaa gaatgtcttt aacgccaaag tgatcgccat tgatgtcaat
    13561 gatgagcagt taaaactggc aaccgaaatg ggtgcagatt tagcgattaa ctcacgcacc
    13621 gaagacgccg cccaaattgt gcaggagaaa accggtggcg ctcacgctgc ggtggtaaca
    13681 gcagtagcta aagctgcgtt taactcggca gttgatgctg tccgtgcagg cggtcgtgtt
    13741 gtggctgtcg gtctgccgcc ggagtctatg agcctggata tcccacgtct tgtgctggat
    13801 ggtattgaag tggtcggttc gctggtcggc acgcgccagg atttaactga agccttccag
    13861 tttgccgccg aaggtaaagt ggtgccgaaa gtcgccctgc gtccgttagc ggacatcaac
    13921 accatcttta ccgagatgga agaaggcaaa atccgtggcc gcatggtaat tgatttccgt
    13981 cactaagagg cctttgctgc gactcccatg ttcgggtcgc agcatcgcac actctccaac
    14041 atgaaatggc taaatggatt attgttgcgt aggaaggaac aataatgata gtgttcccag
    14101 tgaaggaaca ctactgagag taaagacact gatgaaaatg gccaatcatc cccgcccggg
    14161 ggacattatt caggaatcac tggacgaact taatgtcagc ctgcgcgagt ttgccagagc
    14221 aatggaaatt gcgccctcaa cggcaagccg attgctgaca ggaaaagcag ctttgacgcc
    14281 agaaatggca attaaacttt ccgtggtgat cggcagttcg ccgcaaatgt ggctgaatct
    14341 gcaaaacgcc tggagtctgg cagaggctga aaaaacggtg gatgtgtcgc gattacgccg
    14401 tctggctgcg caataaaaaa tggcacctta taaagcacca tttgagactg atgacaaacg
    14461 caacattgcc tgatgcgcta cgcttaccag gcctacacgc tcactgcaat ctattgtatt
    14521 tgaagggttt tcatgccgga taaggcattc acgacgcatc cgggatgaac aaagcccacg
    14581 ttgtctacta tatgaaaatg gcgcctttta cagcgccatt ttcagcttaa agttcaaaag
    14641 agattatatc ccttcttcac tctctttttt cgcttctgcc ttctcgattt cacgatacca
    14701 gcgtggatgg tgtttcttcg cccagcgacg gcttaccttc ccttcgatca tccctttaat
    14761 cgatcctttc acccaaaatg ccatatacat atggatcagg atggcgtgga tcaggatgat
    14821 accggcagcc gcgtggatca gcaggctata acggacaacc tgcatcggga agtactgcgc
    14881 aaagtacgga cgccagataa tcaccccggt caccaacagc acgaaaatca tgctcatgat
    14941 cgaccagaac atcatctttt gcccggcgtt gtacttaccg acatccgcca ctttgtgctc
    15001 attgcctttt aatacttcga caatgttcaa cagccacgga atatctttct gatctgggat
    15061 gttgtgatgc acaaaacgca caaacataaa catcagtgcg acgaaaatcg caatgccgaa
    15121 gaacgggtgc aaaatgcgtc ccatctgcgg cgtaccgaag gtttgcgtca gccattgcag
    15181 cgtcgggaag aagaacgaaa tcccggacag cgccaccagg aagaagcaaa tcaccacggt
    15241 ccagtgacag gcgcgatcaa taaatttggt gcgcacaatc attttcgact tactcatgat
    15301 gatcctcctc gtcatcgtcc acttccttat tcgggccaat accgatgtag tggaaaatca
    15361 acccggcaaa agtggccata aagccagccg ctgccagcgg tttcaacgcg cctttccaca
    15421 ggcttaccga ggtgtcgatc ttcggatctt tcggcagacc gtgatacagc tccggctgat
    15481 cggcgtgatg cagcacgtac ataacgtgcg taccaccgac cccttccggg ttgtagacgc
    15541 cagcatgttc gtaaccacgc gctttcagtt tcgccacgcg ctgttccgcc agctccagca
    15601 tctccttctt ggtgccgaag tggatagccc cggtcggaca ggttttcaca caagccggtt
    15661 ccaggccgac gctgacgcga tcgacgcaga gcgtgcattt atatacccgg ttatcctctt
    15721 tgttgaggcg cggaatatta aacggacacc cggcagtgca gtaaccacag ccgatgcagt
    15781 tttccgactg gaaatcgaca atcccgttag cgtactgaat gattgcacca gcagacgggc
    15841 acgccttcag gcagccggga tcttcacagt gcatacagcc gtctttacgg atcagccact
    15901 ccagcttgcc gttctgttcg gtttcgctaa agcgcatcac cgtccaggac ttggcgctca
    15961 gatcggcggg gttatcgtaa accccgacgc agtgccccac ttcatcacgg atgtcgttcc
    16021 actccgaaca cgccacctga caggctttac agccgataca ggtggaaacg tcgataagtt
    16081 ttgcgacttc tgctttgtaa tcacgcacct gagaaggcgg cgtgatggag ttagttgcgg
    16141 accttttgat aatgtcctgc gtttccatag ccatctgttc gcccccttac gccttctcga
    16201 tgttgactaa gaacgcttta tattccggcg tttgcgagtt tgcatcaccg acattcggcg
    16261 tcagagtgtt agcgatataa cctttacgcg cgacaccctc aaagccccag tggattggaa
    16321 tacccaccgt ttcaacctgc tgaccgttta cattcagcgg cttcagacgg cgcgttacca
    16381 cagccaccgc gcggataaat ccacgcttgc tggagacagt gacacgatcg ccattattaa
    16441 tgcctttcgc cgccgccagc gtttcgctga tttccacaaa ctgttccggc tgagcaattg
    16501 cgttgagcaa tgcgtgcttg gtccaggtgt ggaagtgctc ggtcagacga taggtcgtac
    16561 ccacatacgg gaactgctct tttttaccca tccgcagcgc gtcttgttca tacagacgaa
    16621 caaccgggtt agacaccacg ttcggatgca gcgggttagt gcccagcggc gtttcaatcg
    16681 gctcgtagtg ttccgggaac ggaccttccg ccattttgtt gatggcaaac aggcgtccca
    16741 tcccttccgg ctgcatgata aacggcccgg ttggcgtacc cggtgcggca ttgccgaagt
    16801 caggaatatc gttacccgtc cacttgctgc cgttccactg gatcagcatc cgtttcggat
    16861 cccacggttt accgttgata tccgccgaag cacggttgta cagcacgcga cggttgagcg
    16921 gccacgccca ggcccatccc agcgtattcc ccagaccgga cgggtcggag ttatcgcggt
    16981 tagccatctg gttgccctgc tctgtccagc taccggtgta gatccagcaa gaagatgcgg
    17041 ttgtaccgtc atcacgcaga tgcgcaaagc tactcagcaa ctgacctttc ttcgcaatca
    17101 gcacgccatt agcatcatag agatcttcca gcgcatagcc gttgttctct ttagctactt
    17161 cgtcagattg cggttcgtgc ggctgcttgt agttccagct catcttcatc agcggttcta
    17221 cgcctttacc accttcggcc tggtacaact cgcgcagatg atggtagata cccgccagaa
    17281 tttcgccgtc gttacgcgct tcgcccggcg cgtcctgacc tttccagtgc cactgtaacc
    17341 agcgaccgga gttagcgata gaaccatcct cttcagcaaa gcaggtcgaa ggcagacgga
    17401 atacttcagt ctgaatagac gccggatcga catcgttcga ctcgccgtgg ttctgccaga
    17461 aggtagaggt ttcagtcacc agcggatcga taaccaccat gtacttcagt ttgctcaggc
    17521 agctcaccac tttgtttttg tccgggaagg acgcaaccgg gttaaagccc tggcagaaat
    17581 aaccggtgac tttgccttcg tccatcatgt tgaaatactt gatgacgtcg taggtctggt
    17641 cccacttcgg cagccagtca tagccccagt tgttctcttt ctgcgcggca tcgccataga
    17701 aagatttcat caggctaacg aagaacttcg gatagttgct ccagtagttc acctgatcag
    17761 ccagcgtcgc tttcggcgtg ttcgcttcca gatacgactg caaatcaacc tgtttttctg
    17821 acggcagcgt cagataacct ggcaggctgg tagagagcag gcctaagtca gtcaggccct
    17881 gaatgttgga gtgaccacgc aatgcgttca cgccgccacc ggccataccc atgttaccga
    17941 gcagtaactg gatcatcgcc atagtacgga tgttctgcgc acccacggtg tgctgcgtcc
    18001 agcccagcgc gtacaggaag gtggttgtgc gatccggtgc gctggtggag gccagcactt
    18061 cacacacttt caggaagtcg gcttttggcg taccgcagat gttttcaacg acgtccggcg
    18121 tgtagcggga aacgtgcgct ttcagcaggt tccacacaca gcgcggatga gtcagtgttt
    18181 catcgcgttt cgcatagccg ttttcatcga actgatagtt ccaggacgat ttatcgtact
    18241 ggcgtttttc agcgtcataa ccgctgaaca gaccgtcttc gaaagcaaaa tcatcacgca
    18301 ccagcaggct ggcgttggtg taatgtttaa cgtattcggc gttgattttg ttgttttcga
    18361 tcaggtagcg caaaacgcca gacaggaacg taatgtccgt accggaacga ataggtgcgt
    18421 aaatatccgc cacagaagcg gtacgcgtaa aacggggatc gacaacgatc aaggttgcat
    18481 cgttgttgtt tttcgcttcc atcgcccagc ggaaaccgac gggatgcgct tcagcagcgt
    18541 taccgcccat caccattacg acgttagcgt ttttgatatc cacccagtgg ttggtcatcg
    18601 caccgcgacc aaatgttgga gcaagacttg ctaccgttgg tccgtgtcag acgcgcgcct
    18661 ggttgtctac tgccagcatc ccgagggagc gggcaaattt ttgagtcagc atcccggttt
    18721 cgttgctggc accggaggca cacagcatac cggtagaaag ccaacggttt accgttacgc
    18781 cctgctcgtt cttttcaata aagttagcgt cacggtcagc tttcatcagc ttcgcaatac
    18841 gggagaatgc ttcttcccag ctaatgcgct gccatttgtc agaacctggc gcacgatatt
    18901 ccgggtagcg cagacggttt tcgctgttga cgtaatccag caaaccggcc cctttcgggc
    18961 acagcgcacc acggcttacc ggatgatccg ggtcaccttc aatgtgataa atcgcttctc
    19021 tggcgttttt cgcgccatca cccaggctat acatcaatag cccgcaacct acggaacagt
    19081 atgtgcaggt gttacggatc tctttagcgc gtaataattt gtagtttcgc gcctgagcca
    19141 gtgcttgctt cggggcaaag cccaatgccg ctaccgttgt tccagccata ccgcccgcgc
    19201 agattttaaa aaattgtctg cgactgacgt ccattgcttt cctctttttt caggggtatt
    19261 actgcgcgag gaaactaaca gtaaaattct gaatcttttt gcgcgaaatc aaaaagaaca
    19321 cgtgtttgcc acaaaataat ccgcctgcgc aaattgacct acctcaatag cggtagaaaa
    19381 acgcaccact gcctgacagg ccagttaaaa aaatgctata aaattcagct taatttttaa
    19441 cggcaagaga gacaaaacag cgagcatgac acgacaaaaa gcaacgctca tagggctaat
    19501 agcgatcatc ctgtggagca cgatggtagg attgattcgc ggtgtcagtg aggggctcgg
    19561 cccggttggc ggcgcagctg ctatctattc attaagcggg ctgctgttaa tcttcacggt
    19621 tggatttccg cgtattcggc aaatcccgaa aggctatttg ctcgccggga gtctgttatt
    19681 cgtcagctat gaaatctgtc tggcgctttc cttagggtat gcggcgacac gtcatcaggc
    19741 gattgaagtg ggtatggtga actatctatg gcccagcctg acaattctct ttgccattct
    19801 gtttaatggt cagaaaacca actggctgat tgcaccagga ttattattag ccctcgtcgg
    19861 cgtctgctgg gtgttaggcg gtgacaatgg gttacattat gatgaaatca tcaataatat
    19921 caccaccagc ccattgagtt atttcctgcg ttcattggtg cgtttatctg ggcagcctac
    19981 tgcacagtaa cgaataaata cgcacgcgga tttaacggaa ttaccgtttt tgtcctgcta
    20041 acgggagcaa gtctgtgggt ttactatttt ctcacgccac aaccagaaat ggtatttagc
    20101 acgcccgtca tgattaaact catctctgcg gcatttacct taggatttgc ttatgctgca
    20161 tggaatgtcg gtatattgca tggtaacgtc accataatgg cggtaggttc gtattttacg
    20221 cccgtacttt cctcagcgct tgcagccgtg ctgctcagcg ccccgctgtc gttctcgttc
    20281 tggcaaggcg cgctaatggt ctgcggcggt tccctgctct gctggctggc gacacgtcgt
    20341 ggttaaaata attgccgggt ctacggcccg gcagttaatc agataaattc cgacaatatt
    20401 aaaaaataaa tttcaaatac cagtaattca ccttatatct catttcgact tcgatcacat
    20461 atcgataaat aatattattt catctatttt tctcattgtt tttaatcacc attctatttt
    20521 aaaaacagta tgtcatttat aaatgacgcc gtttaaaatt cgtttagaaa atacgtttaa
    20581 cgataattaa aaggattctg ttaaatgaaa ttaaaaatag ttgcggtggt tgtaactggt
    20641 ttgttagctg cgaacgtagc acacgctgcc gaagtctata acaaggatgg taataaactc
    20701 gacctttatg gcaaggttac cgctctacgt tattttactg atgataagcg tgacgatggt
    20761 gataaaactt atgcccgtct cggctttaaa ggagaaacgc aaatcaatga tcaaatgatt
    20821 ggttttggtc actgggaata tgattttaaa ggctataacg atgaagccaa cggctcgcgc
    20881 ggcaacaaga cccgtctggc ctatgcaggt ttaaaaatta gtgaatttgg ctctctggac
    20941 tatggtcgta actacggtgt cggctatgac attggttcat ggaccgatat gttgccagaa
    21001 tttggtggcg atacctggag tcagaaagat gtcttcatga cataccgtac taccggtgtg
    21061 gcaacctatc gcaactacga tttcttcggc ttaattgaag gtctgaactt tgccgtacaa
    21121 tatcaaggca aaaatgaacg tactgacaac agtcatcttt atggtgctga ctacacgcgt
    21181 gccaacggtg acggtttcgg tatctcctca acttatgttt atgatggctt tggtatc
//
LOCUS       DAJVTL010000074        20992 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.074, whole genome shotgun sequence.
ACCESSION   DAJVTL010000074 DAJVTL010000000
VERSION     DAJVTL010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20992
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.074"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            243..584
                     /gene="raiA"
                     /locus_tag="OQQ26_002599"
     CDS             243..584
                     /gene="raiA"
                     /locus_tag="OQQ26_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HCS1858014.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
                     DANFVEEVEEE"
     misc_feature    687..812
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            688..735
                     /gene="pheL"
                     /locus_tag="OQQ26_002600"
     CDS             688..735
                     /gene="pheL"
                     /locus_tag="OQQ26_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheA operon leader peptide PheL"
                     /protein_id="HCS1858015.1"
                     /translation="MKHTPFFFAFFFTFP"
     gene            834..1994
                     /gene="pheA"
                     /locus_tag="OQQ26_002601"
     CDS             834..1994
                     /gene="pheA"
                     /locus_tag="OQQ26_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HCS1858016.1"
                     /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
                     PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
                     TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
                     FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQN
                     FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
                     GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
     gene            complement(2037..3158)
                     /gene="tyrA"
                     /locus_tag="OQQ26_002602"
     CDS             complement(2037..3158)
                     /gene="tyrA"
                     /locus_tag="OQQ26_002602"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HCS1858017.1"
                     /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
                     KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLEQG
                     DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
     gene            complement(3169..4239)
                     /gene="aroF"
                     /locus_tag="OQQ26_002603"
     CDS             complement(3169..4239)
                     /gene="aroF"
                     /locus_tag="OQQ26_002603"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HCS1858018.1"
                     /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSQQQEAQIADSRKTI
                     SDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNQDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHQDLNGQLTARVA"
     gene            4449..4814
                     /locus_tag="OQQ26_002604"
     CDS             4449..4814
                     /locus_tag="OQQ26_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2799 domain-containing protein"
                     /protein_id="HCS1858019.1"
                     /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
                     SAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPANCNNVESASQ
                     LHEVWQKGADENASTIRLN"
     gene            4964..5482
                     /locus_tag="OQQ26_002605"
     CDS             4964..5482
                     /locus_tag="OQQ26_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HCS1858020.1"
                     /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
                     WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
                     TFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
                     DVLMLARKKNDG"
     gene            5472..6698
                     /gene="dgcN"
                     /locus_tag="OQQ26_002606"
     CDS             5472..6698
                     /gene="dgcN"
                     /locus_tag="OQQ26_002606"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HCS1858021.1"
                     /translation="MMDNDNSLNKRPMFKRALRNISMTSIFITMMLIWLLLSVTSVLT
                     LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL
                     ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL
                     AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH
                     RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINMLMNNSDA
                     RKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMV
                     LYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELAD
                     HNMYQAKHQRAEKLVR"
     gene            6714..7196
                     /locus_tag="OQQ26_002607"
     CDS             6714..7196
                     /locus_tag="OQQ26_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HCS1858022.1"
                     /translation="MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG
                     DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE
                     GLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTVQGRAENRRVAVVITTP
                     "
     gene            complement(7273..7620)
                     /gene="rplS"
                     /locus_tag="OQQ26_002608"
     CDS             complement(7273..7620)
                     /gene="rplS"
                     /locus_tag="OQQ26_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HCS1858023.1"
                     /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDRISVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(7662..8429)
                     /gene="trmD"
                     /locus_tag="OQQ26_002609"
     CDS             complement(7662..8429)
                     /gene="trmD"
                     /locus_tag="OQQ26_002609"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HCS1858024.1"
                     /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIYAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     STNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
                     GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHVQQQHKHDGMA"
     gene            complement(8460..9008)
                     /gene="rimM"
                     /locus_tag="OQQ26_002610"
     CDS             complement(8460..9008)
                     /gene="rimM"
                     /locus_tag="OQQ26_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HCS1858025.1"
                     /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
                     EGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLTTRSIEVDWDPGF"
     gene            complement(9027..9275)
                     /gene="rpsP"
                     /locus_tag="OQQ26_002611"
     CDS             complement(9027..9275)
                     /gene="rpsP"
                     /locus_tag="OQQ26_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000256453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HCS1858026.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
     gene            complement(9412..10773)
                     /gene="ffh"
                     /locus_tag="OQQ26_002612"
     CDS             complement(9412..10773)
                     /gene="ffh"
                     /locus_tag="OQQ26_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HCS1858027.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
                     LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
                     IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            10940..11731
                     /locus_tag="OQQ26_002613"
     CDS             10940..11731
                     /locus_tag="OQQ26_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HCS1858028.1"
                     /translation="MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVC
                     HAIALEARILPDGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALI
                     NLALATFMPNEYITHLEATPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKL
                     AFNQEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWF
                     VYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLAYFGSRIVQQLIS"
     gene            11752..13038
                     /locus_tag="OQQ26_002614"
     CDS             11752..13038
                     /locus_tag="OQQ26_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCS1858029.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYSDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK
                     TDIVVSSSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID
                     INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA
                     DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE"
     gene            complement(13093..13686)
                     /gene="grpE"
                     /locus_tag="OQQ26_002615"
     CDS             complement(13093..13686)
                     /gene="grpE"
                     /locus_tag="OQQ26_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HCS1858030.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
                     ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
                     DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
     gene            13809..14687
                     /gene="nadK"
                     /locus_tag="OQQ26_002616"
     CDS             13809..14687
                     /gene="nadK"
                     /locus_tag="OQQ26_002616"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HCS1858031.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIA
                     HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
                     DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            14773..16434
                     /gene="recN"
                     /locus_tag="OQQ26_002617"
     CDS             14773..16434
                     /gene="recN"
                     /locus_tag="OQQ26_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HCS1858032.1"
                     /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
                     ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALMADGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
                     IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
                     QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ
                     FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
                     TDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            16583..16924
                     /gene="bamE"
                     /locus_tag="OQQ26_002618"
     CDS             16583..16924
                     /gene="bamE"
                     /locus_tag="OQQ26_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417107.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HCS1858033.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
                     KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT
                     NIDNKPALSGN"
     gene            complement(16986..17276)
                     /locus_tag="OQQ26_002619"
     CDS             complement(16986..17276)
                     /locus_tag="OQQ26_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HCS1858034.1"
                     /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
                     DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
     gene            complement(17266..17703)
                     /gene="ratA"
                     /locus_tag="OQQ26_002620"
     CDS             complement(17266..17703)
                     /gene="ratA"
                     /locus_tag="OQQ26_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010376629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin RatA"
                     /protein_id="HCS1858035.1"
                     /translation="MPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTP
                     GQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRI
                     EFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR"
     gene            17874..18356
                     /gene="smpB"
                     /locus_tag="OQQ26_002621"
     CDS             17874..18356
                     /gene="smpB"
                     /locus_tag="OQQ26_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HCS1858036.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
                     "
     gene            18571..18933
                     /gene="ssrA"
                     /locus_tag="OQQ26_002622"
     tmRNA           18571..18933
                     /gene="ssrA"
                     /locus_tag="OQQ26_002622"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(19094..>20992)
                     /gene="ypjA"
                     /locus_tag="OQQ26_002623"
     CDS             complement(19094..>20992)
                     /gene="ypjA"
                     /locus_tag="OQQ26_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311542.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin-like autotransporter YpjA/EhaD"
                     /protein_id="HCS1858037.1"
                     /translation="TFSISGNLATNMLLENGGNLLVLAGTEARDSTVGKGGAMQNLGQ
                     DSATKVNSGGQYTLGRSKDEFQPLARAEDLQVAGGTAIVYAGTLADASVSGATGSLSL
                     MTPRDNVTPVKLEGAVRITDSATLTIGNGVDTTLADLTAASRGSVWLNSNNSCAGTSN
                     CEYRVNSLLLNDGDVYLSAQTAAPATTNGIYNTLTTNELSGSGNFYLHTNVAGSRGDQ
                     LVVSNNATGNFKIFVQDTGVSPQSDDAMTLVKTGRGDASFSLGNTGGFVDLGTYEYVL
                     KSDGNSNWNLTNDVKPNSDPNPNPKPDPKPDPKPDPKPNPTPDPTPTPVPEKRITLST
                     AAVLNMAATLPLVFDAELNSIRERLNIMKASPHNNNVWGATYNTRNNVTTDAGAGFEQ
                     TLTGMTVGIDSRNDIPEGIATLGAFMGYSHSHIGFDRGGHGSVGSYSLGGYASWEHES
                     GFYLDGIVKLNRFESNVAGKMSSGGAANGSYHSNGLGGHIETGMRFTDGNWNLTPYAS
                     LTGLTADNPEYHLSNGMESKSVDTRSLYRELGATLSYNMRLGNGMEVEPWLKAAVRKE
                     FVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHLGVGYSHGAGVESPWNG
                     VAGVNWSF"
BASE COUNT         5360 a         5543 c         4909 g         5180 t
ORIGIN      
        1 cttgagctgc cgttttttta ttctgttagt tgtgaaactg aagcgattta gtcactatcg
       61 atctcatcaa atatggctcg ctttgagata ttcctcaagt aaaaaaacac ctcttcctgc
      121 gatttctcac aaaaaagatt cgttgacaaa aagtgacaaa attatgagat tcccatcaca
      181 cattttgaca tcaggaacgg tatgctgaat tcaccaagac gggaagacaa gaggtaaaat
      241 ttatgacaat gaacattacc agcaaacaaa tggaaattac tccggccatc cgccaacatg
      301 tcgcagaccg tctcgccaaa ctggaaaaat ggcaaacaca tctgattaat ccacatatca
      361 ttctgtccaa agagccacaa gggtttgttg ctgacgccac aatcaataca cctaacggcg
      421 ttctggttgc cagtggtaaa catgaagata tgtacactgc aattaacgaa ttgatcaaca
      481 agctggaacg gcagctcaat aaactgcagc acaaaggcga agcacgtcgt gccgcaacat
      541 cggtgaaaga cgccaacttc gtcgaagaag ttgaagaaga gtagtccttt atattgagtg
      601 tatcgccaac gcgccttcgg gcgcgttttt tgttgacagc gtgaaaacag tacgggtact
      661 gtactaaagt cacttaagga aacaaacatg aaacacacac cgtttttctt cgcattcttt
      721 tttaccttcc cctgaatggg aggcgtttcg tcgtgtgaaa cagaatgcga agacgaacaa
      781 taaggcctcc caaatcgggg ggcctttttt attgataaca aaaaggcaac actatgacat
      841 cggaaaaccc gttactggcg ctgcgagaga aaatcagcgc gctggatgaa aaattattag
      901 cattactggc agagcggcgc gaactggccg tcgaggtagg aaaagccaaa ctgctctcgc
      961 atcgcccggt acgtgatatt gatcgtgaac gcgatttact ggaaagatta attacgctcg
     1021 gtaaagcgca ccatctggac gcccattaca ttactcgcct gttccagctc atcattgaag
     1081 attccgtatt aactcagcag gctttgctcc aacaacatct caataaaatt aatccgcact
     1141 cagcacgcat cgcttttctc ggccccaaag gttcttattc ccatcttgcg gcgcgccagt
     1201 atgctgcccg tcactttgag caattcattg aaagtggctg cgccaaattt gccgatattt
     1261 ttaatcaggt ggaaaccggc caggccgact atgccgtcgt accgattgaa aataccagct
     1321 ccggtgccat aaacgacgtt tacgatctgc tgcaacatac cagcttgtcg attgttggcg
     1381 agatgacgct gaccatcgac cactgcctgc tggtttccgg caccaccgat ttatccacca
     1441 tcaatacggt ctacagccat ccgcagccgt tccagcaatg cagcaaattc cttaatcgtt
     1501 atccgcactg gaagattgaa tataccgaaa gtacgtctgc ggcaatggaa aaggttgcac
     1561 aggcaaaatc accgcatgtt gctgcgttgg gaagcgaagc tgggggcact ttgtacggtt
     1621 tgcaggtact ggagcggatt gaagcgaatc agcgacaaaa cttcacccga tttgtggtgt
     1681 tggcacgtaa agcaattaac gtgtctgacc aggttccggc gaaaacgacg ttgttaatgg
     1741 cgaccgggca acaagccggt gcgctggttg aagcgttgct ggtactgcgc aaccacaatc
     1801 tgattatgac ccgtctggaa tcacgcccga ttcacggtaa tccatgggaa gagatgtttt
     1861 atctggatat tcaggccaat cttgaatcag cggaaatgca aaaagcattg aaagagttag
     1921 gggaaatcac ccgttcaatg aaggtattgg gctgttaccc aagtgagaac gtagtgcctg
     1981 ttgatccaac ctgatgaaaa ggtgccggat gatgtgaatc atccggcact ggattattac
     2041 tggcgattgt cattcgcctg acgcaataac acgcggcttt cactctgaaa acgctgtgcg
     2101 taatcgccga accagtgctc caccttgcgg aaactgtcaa taaacgcctg cttatcgccc
     2161 tgctccagca actcaatcgc ctcgccgaaa cgcttatagt aacgtttgat taacgccaaa
     2221 ttacgctctg acgacataat gatgtcggca taaagctgcg gatcctgagc aaacagtcgc
     2281 ccgaccatcg ccagctcaag gcggtaaata ggcgaagaga gcgccagaag ttgctcaagc
     2341 tgaacatttt cttctgccag atgcagccca taagcaaaag tagcaaagtg gcgcagagcc
     2401 tgaataaacg ccatattctg atcgtgctcg acagcgctaa tacgatgcaa ccgagcgccc
     2461 cagacctgaa tttgctccag aaaccattgg tatgcttccg gcttacgtcc atcacaccag
     2521 accacaactt gctttgccag gctaccgctg tccggaccga acattgggtg taaccccagc
     2581 accgggccat cgtgcgccgc cagcatggcc tgtaatggtc catttttcac cgatgccaga
     2641 tcaaccagaa tacaatcttt cggtaaaggc ggtaatttgc cgataacttg ctcagtaacg
     2701 tggattggca cactaacaat caccattccg gcatcggcaa caatatcagc cgctcgatcc
     2761 cagtcatgtt gctccagaat ccgcacctga taacccgata gtgtcagcat cttctcgaac
     2821 aggcgtccca tctgaccgcc accgccgacg ataaccaccg gacgcagtga cggacaaagt
     2881 gttttaaatc ctttgtcgtt ttcactggag taagattcac gcatcacccg acgcaaaaca
     2941 tcctcaatca gatctggcgg tacacccaga gcttccgcct ctgcacgacg cgaggccaac
     3001 atagatgcct ctcgctccgg aacataaata ggcagtccaa agcggctttt cacctctccc
     3061 acttcagcaa ccagttccag acgcttcgct aataaattca gcagcgcttt atcgacttca
     3121 tcaatttgat cgcgtaatgc ggtcaattca gcaaccataa taaacctctt aagccacgcg
     3181 agccgtcagc tgcccgttca gatcctgatg aatttcacgc agcaaggcat cggtcatttc
     3241 ccagctaatg caggcatcgg ttacggatac accgtatttc atttcactgc gcggttgctc
     3301 ggaagactga ttgccctcgt ggatattact ttcgatcatc agaccaataa ttgagcgatt
     3361 gccatctttg atttgagcaa ccacggattc tgccaccgca ggctgacggc gataatcttt
     3421 attggaatta ccgtggctgc aatctaccat cagagacggg cgcagtcccg cctgttccat
     3481 ctctttttca cattgcgcaa catccgcagg gctatagttc ggcgctttac caccgcgcag
     3541 gatgacatgc ccgtcctgat tcccctgagt ttgtagcaac gcaacctgcc ctgcctggtt
     3601 aatgccaaca aaacggtgcg gctgggcggc ggcgcgcata gcgttaattg ctgttgccag
     3661 actgccgtcg gtgccgtttt taaaaccaac cggcatggaa agcccggagg ccatttcacg
     3721 gtgagtttgc gattccgttg tacgagcacc aattgctgac cagctaaaca gatcgcccag
     3781 gtattgcggg ctattcggat ctaacgcttc cgtcgccagt ggcagtccca tattcaccag
     3841 ctcaagcagc aatttacgcg cgatctgcag cccggcttct acatcaaaag agccatccat
     3901 atggggatcg ttaattaacc ctttccagcc gacagtggta cggggttttt caaaatagac
     3961 gcgcattacc agatagaggc tatcgctgac ctctgcggca agggctttaa atcgacgagc
     4021 atattccaga gcagtttccg gatcatgaat ggaacaagga ccacaaacta ccagcagacg
     4081 aggatcgcgc ccggcgataa tatctgaaat ggttttacgc gagtcagcaa tctgggcttc
     4141 ttgttgctgg ctcaatggaa aagcggcctt cagttgttcc ggagtcatta aaacctgttc
     4201 gtcggtaata tgtacgttat tcagtgcgtc tttttgcatg atggcgatcc tgtttatgct
     4261 cgtttgcgat agttgatcct cagcgaggat gacgtaacga taacacataa agtaaagttt
     4321 tcaatccata tttcgtacat ttttctttac ataaacaatt tactcgcgct tttgatgctt
     4381 atttcgtaca aataaattta cacccccttt taaaaacaat ccgctatgct ttgaaaaagg
     4441 agaaagaaat gatgaaaaag tttatcgccc ccttgttggc tttactggtt agcggatgtc
     4501 agattgatcc ttatactcac gcgccaacct tgaccagcac cgactggtat gatgtcggta
     4561 tggaagatgc gatatcgggc agcgccataa aagatgacga tgcatttagc gattcacagg
     4621 cggatcgcgg tctatacctt aaaggatatg ccgaaggaca aaagaaaact tgccagaccg
     4681 attttactta tgcccgggga ctttccggta aaagctttcc tgccaactgt aacaatgttg
     4741 aaagtgccag ccaactgcat gaagtatggc aaaaaggggc tgatgaaaat gccagcacaa
     4801 tacgattaaa ttaattaaaa ccccacaaat aaattaaaca taagatttta ctcattgtgt
     4861 tttatttctc acattgatga cggtcgcatg aaaaaatgat attttaatga gcattctgaa
     4921 aaaatatcga tgcatttcga gcgaagatgg tggggagccc tgaatgcgtt tttctcaccg
     4981 actgttctta cttctgattc tcctgctgac gggagcacca atactcgctc aggagccttc
     5041 tgacgttgcg aaaaacgtgc gtatgatggt ttccggtatt gtcagttaca cccgctggcc
     5101 tgcgctatca gggccaccaa agttatgtat cttttcatct tcacgtttta gtaccgccct
     5161 acaagagaat gccgcgacat ctttgcctta tctgcctgtc atcattcaca ctcaacaaga
     5221 ggcgatgatt tcaggctgca atggttttta ttttggcaac gagtcaccga cattccagat
     5281 ggaattaacc gaacaatatc cgtcaaaggc gttattatta attgccgaac aaaataccga
     5341 gtgcattatt ggtagcgcct tttgtctgat catccacaat aatgacgtca gatttgccgt
     5401 aaacctggat gccttatcgc gtagcggtgt aaaggtcaac ccggatgtct taatgctcgc
     5461 acggaagaaa aatgatggat aacgataatt ctcttaataa gcgccccatg tttaaaagag
     5521 cattacgcaa catcagtatg accagcatat ttatcactat gatgctgatc tggttgctgc
     5581 tttccgtgac ctcggtgctg accctgaaac agtacgcgca aaaaaacctg gcactgacag
     5641 cagcaacaat gacttacagt ctggaagcag ctgtcgtttt tgccgatggc cctgcagcaa
     5701 ctgaaacact ggcagcgctg ggccagcaag ggcaattttc aactgcagaa gtacgtgata
     5761 agcagcaaaa tattctggcg tcctggcatt acacccgtaa ggatccaggc gatactttca
     5821 gcaatttcat aagccactgg ctcttccccg cccccatcat tcagccgatt cgtcacaatg
     5881 gtgaaaccat tggcgaagta cgcttaaccg ctcgcgacag ttcaatcagc cattttatct
     5941 ggttttcgct cgccgtactg accggttgta ttctgctggc atcaggcatc gcaattaccc
     6001 tcacccgcca tttgcacaat ggcctggtgg aagcactgaa aaatatcacc gatgtcgtac
     6061 atgatgtgcg ttccaaccgc aatttttccc gacgagtttc ggaagaacgt atcgctgagt
     6121 ttcaccgctt cgctctcgac ttcaacagtc tgctggatga aatggaagag tggcagcttc
     6181 gtttacaggc taaaaatgcg cagcttctac gtaccgcgct acatgaccca ttaaccgggc
     6241 tggctaaccg cgcagcgttt cgtagcggca tcaacatgtt gatgaacaat tccgatgccc
     6301 gaaaaacgtc ggcgttacta tttcttgatg gcgataattt caaatatatc aatgatacct
     6361 ggggtcatgc gacgggcgat agagtcttga ttgaaatcgc aaaacggtta gctgaatttg
     6421 gcgggctgcg acataaagca taccgcctag gcggcgatga attcgctatg gtgctctatg
     6481 atgtacagtc ggaatctgaa gtgcagcaga tatgctcagc actgacacaa atctttaatc
     6541 tcccgtttga tcttcataat ggccatcaga ccaccatgac attaagcatt ggttacgcga
     6601 tgaccattga gcacgcctct gcggaaaaat tacaagagct tgccgatcac aatatgtatc
     6661 aggccaaaca ccagcgtgcc gaaaagctgg tgagataaca aggatatatc gatatgataa
     6721 agcacctggt agcacccctg attttcacct cactaatact gactggctgc cagtcccctc
     6781 agggaaagtt tactcctgag caagtcgccg ctatgcaatc ttatggattt actgaatccg
     6841 ccggcgactg gtcgctgggc ttatcagatg ccattctgtt cgcaaaaaat gactacaaat
     6901 tgctcccgga aagccagcaa cagatccaaa ccatggcagc caaattggcc tcgacagggc
     6961 taacacatgc ccgtatggat ggacacaccg ataactatgg tgaagacagt tacaacgaag
     7021 gcttatcatt gaaacgggcg aatgtcgtgg ccgatgcatg ggctatgggt ggacaaattc
     7081 cacgcagcaa tctcaccaca cagggtttag gaaaaaaata tcccatagcc agtaacaaga
     7141 ccgtccaggg ccgcgccgag aaccgccgcg tcgcagtggt gattacaacc ccttaaaaca
     7201 cgagcaaaca gacaaaaaaa gggccagcca attggccagc ccttcttaac aggatgtcgc
     7261 ttaagcgaaa tcttagttaa gacgctcttt gatacgagca gccttaccag tacgctcacg
     7321 caggtagtac agtttagctt tacgaacagc accacgacgt ttgacagaaa ttctgtcaac
     7381 taccggagag tgagtctgga agacacgctc aacgccttcg ccgttggaaa ttttacgaac
     7441 agtgaatgca gagtgcagac cgcggttacg aatagcgata accacgccct cgaatgcctg
     7501 cagacgtttt ttggaacctt caacaaccca tactttcact tccacggtat cacccggacg
     7561 gaaggaaggt acgtcctgct tcatctgctc ttgttcaagt tgcttaataa tgttgctcat
     7621 aatttaatct cttatcctgg gtaaactgat atctcggggg cttacgccat cccatcatgt
     7681 ttatgttgct gttgtacgtg ttccgttttg aactccgcca gcaaccttgc ttgctcttca
     7741 gtcagagcca ggttttccag aagttcaggt cttctaagcc aggtacggcc cagcgactgt
     7801 ttcaaacgcc agcgacgtat ctcggcatgg ttgcccgaca gtaacactgg cggaacttcc
     7861 atcccttcta acacctcagg ccgcgtatag tgcgggcaat ccagcaatcc ttcagcaaag
     7921 gaatcttccg ttgccgaggc ttcatgtccc agtactcccg gaataaaccg ggaaacggag
     7981 tcaatcagcg tcattgctgg taactcacca ccactgagaa cgtaatcgcc gattgaccat
     8041 tcttcgtcaa tttcggtttg gatcacgcgc tcatctatac cttcgtagcg accgcacacc
     8101 agaatcaatt tttgattcgt tgacagttcg ctgacgcccg cttgatcaag cttgcgtccc
     8161 tgtggtgaca gataaatcac ctttgcgcct tcacccgccg cggcttttgc tgcataaatg
     8221 gcgtcccgca agggttgcac catcattaac atccccggtc cgccgccgta aggacgatcg
     8281 tccacggtac ggtgccggtc atgcgtgaag tcgcgaggac tccaactctg gatgctcagc
     8341 aggccatttt taactgcccg gccagttacc ccgtaatcgg taattgcgcg gaacatttca
     8401 ggaaacaggc taattatgcc aatccacata gcgccgtctt ttaccgttta tccggtggtt
     8461 taaaaaccag gatcccaatc tacttcgatt gaacgagtag tgagatcgac tttcttgata
     8521 acctgcccat cgaggaacgg tacgagacgt tccttgatac caaacgcatc tttcaggttt
     8581 gccttaatga cgagaacgtc attagatccg gtttccatca tatcgacgac tttaccgaga
     8641 tcgtagcctt cagtggttac tacctggcag cccatcaggt ctttccagta gtagtccccc
     8701 tcttcaagct gaggcagttg cgatgaatcc acgacaattt cacaattcgt cagcaggttc
     8761 gccgcatcac gatcgtcaac gcctttcagc ttgatgatca tgtcctgatt gtggtgcttc
     8821 cagctttcca gctggacttg ctgccactga cccgccttct ggataaacca gggctgatag
     8881 tcaaaaatgc tttcggcgtc ttcggtggaa gaaaacactc tgagccaccc acgaataccg
     8941 taagacgaac ccatttttcc caaaacgatg ggatcaacag gtgcttgcgc ggtgagttgt
     9001 ttgctcatca tgaccaccgt gacagattaa gctgctttgt ttacttcttt gatcagcgca
     9061 gcaacgcgat cagaaatagt tgcgccctgg ccaacccagt gagcgatgcg atccagatcc
     9121 aggcgagtgc cttcttcttt ttcgctagcg attggattga agaaaccaac gcgctcgatg
     9181 aagcgaccgt tgcgtgcatt acggctgtca gcgacaacaa cctggtagaa cggacgcttt
     9241 ttagcgccgt gacgtgctaa acgaatagtt accataacat cctcttgtgt gaataaaaca
     9301 accggacccc atcgaggaac ggagtccggt gtcatattaa aagcccgaaa attttactga
     9361 tttctggaga aaatgcaatc agcagttaat aactctgtcg cataaggtca tttagcgacc
     9421 aggaaatccc ggcggcatca tccctttcat gcttctcatc atcttcgcca ttccgccctt
     9481 cttcattttc ttcatcatgc gctgcatgtc gtcgaactgc ttcagaaggc ggttaacgtc
     9541 ctgcacctgc ataccgcaac cggcagcgat acgacgctta cgcgaacctt tgatgatttc
     9601 tggcttagcg cgctctttca tcgtcatcga gttgatgatg gcttccatac gcaccagcac
     9661 tttatcgtcc atctgcgact taacattatc cgggatctgc cccatgcccg gcagcttgcc
     9721 catcaggcta gccatgccgc ccatattttt catctggcgc agttgctcaa gaaaatcgtt
     9781 gagatcgaag ccgtcgcctt ttttcagctt gctggctaat ttctctgcct gcgcgcggtc
     9841 aactttgctt tcgatatctt cgatcagcga cagtacgtcg cccatgccga gaatacgcga
     9901 cgcgatgcgg tccggatgga acggctccag cgcctcagtt ttctcgccaa caccgagaaa
     9961 cttgatcggt ttgccagtga tgtgacgaat agagagcgcc gcaccgccgc gggcatcgcc
    10021 gtccactttg gtcaacacta cgccggtaag cggtaacgct tcattgaatg cttttgccgt
    10081 attggccgca tcctgaccgg tcatggcgtc aaccacaaac agggtttcaa ccgggttaat
    10141 cgacgcatgg acttgtttga tctcgtccat catcgcttcg tcaacgtgca gacgaccagc
    10201 ggtatccacc agcagcacgt cgtagaattt cagtttggct tctttcagcg ccgcgttaac
    10261 gatatctacc ggcttctgac caacatcaga agggaagaaa tcaacgccca cctgctctgc
    10321 cagcgtctca agctgtttga ttgccgccgg gcgataaacg tcggcagaaa ccaccagcac
    10381 tttcttcttg tgcttctcgc gcaggaactt accgagttta ccaacgctgg ttgttttacc
    10441 ggcaccttgc aggcccgcca tcagcacgac cgcaggcggt tgcgccgcca ggttcagggt
    10501 ctggttctct tcgcccatcg ccgcaaccag ttcgttacgg acgattttga cgaactcctg
    10561 ccccggcgtc aggctcttat taacttcatg accaaccgct ttctctttta cgcgattgat
    10621 aaactcacgc actaccggca gagcgacatc cgcctccagc agcgccatgc gcacttcgcg
    10681 cagcgtatct tttacgttgt cttcagtgag gcgtccacgg ccactgatat tgcgcagcgt
    10741 gcgcgacaaa cgatcggtta aattatcaaa cattgtctct cgcctggggt ggaaacggtt
    10801 ggccgcaatc gcgacacatc atcagtattt tgccgcagta taacatgaag gcgtctttgt
    10861 tgttatgcaa cggttggagc agcgttcacc tgacgctata ctgcttctct atcttattgc
    10921 tcaaactgtc gacatcacta tgcccgtttt tgctctgctc gcgcttgtcg cctactccgt
    10981 cagtcttgcg ctgattgttc ccggtctgct gcaaaaaaac ggcggctggc ggcgcatggc
    11041 tattatttct gcggtcattg cgctggtctg ccacgcaatc gctctggaag cccgcatcct
    11101 gcccgacggt gatagcggac aaaacctcag cctgctgaac gttggttcat tggtcagttt
    11161 gatgatctgt acggtaatga ccattgtggc ttctcgcaat cgtggctggt tgctgctacc
    11221 cattgtctat gcctttgcgc ttatcaacct ggcgctggcg accttcatgc ccaatgaata
    11281 catcacccat ctggaagcaa cgcctgggat gctggtgcac attggcttat cgctcttttc
    11341 ctatgccacg ctaattatcg ccgccctgta cgcgctgcaa ctggcgtgga ttgattacca
    11401 actgaagaac aagaagctgg catttaacca ggaaatgccg ccattgatga gtatcgagcg
    11461 taaaatgttc cacatcacgc agattggcgt ggtgctgcta acgctcacgc tttgcactgg
    11521 cctgttctac atgcacaacc tatttagcat ggaaaatatc gacaaggctg tgctctctat
    11581 cgtggcgtgg tttgtctata ttgtgctgct gtggggacat taccatgaag gatggcgtgg
    11641 acgccgcgtc gtctggttta acgttgcggg cgcggtaatt ctgacactgg cctacttcgg
    11701 cagccgaatt gtccagcagt taatcagcta aacccagaaa aggagtttcc cctggaacac
    11761 atttctacta ctacgttgat cattattctg atcatcatgg tggtcatttc agcctatttt
    11821 tccgggtccg aaaccggaat gatgaccctc aaccgctatc gtctgcgaca tatggcgaaa
    11881 cagggtaatc gctcggccaa acgcgtcgaa aaattgctgc gtaagccaga ccgcctgata
    11941 agcctggtgt taatcggcaa taacctggtc aatattcttg cctccgcgct cggcactatt
    12001 gttgggatgc gtttgtacag cgatgcgggc gtggcaattg cgactggtgt gctgactttt
    12061 gtcgtactgg tatttgctga ggtattgccg aaaaccattg ccgcgctgta cccggaaaaa
    12121 gtcgcttatc cgagtagttt tctgctggct ccgctgcaaa ttttgatgat gccgctggtc
    12181 tggttgctga atgctatcac ccgtatgctg atgcgcatga tgggtatcaa aaccgatatc
    12241 gtggttagca gctctttgag caaagaagag ttgcgcacta tcgtgcacga atcacgctca
    12301 caaatttccc gtcgcaatca ggatatgctg ctgtcggtgc tcgatctgga aaaaatgacc
    12361 gttgatgaca tcatggtgcc gcgcagtgaa attatcggta ttgatatcaa cgatgactgg
    12421 aaatcgattc tgcgccaact ctcccactca cctcacgggc gcatcgtgct ctaccgtgat
    12481 tcgctggacg acgccatcag tatgctgcga gtacgtgaag cctggcggtt gatgtcggag
    12541 aaaaaagagt tcaccaaaga aaccatgctg cgcgccgcgg acgagatcta ttttgtgccg
    12601 gaaggtacgc cgctcagcac gcagttggta aagtttcagc gcaacaaaaa gaaagtcggc
    12661 ctggtcgtca acgagtatgg agacattcag gggctggtga cggttgaaga tattctggaa
    12721 gagattgtcg gcgatttcac tacgtcgatg tcgccaacac ttgccgaaga ggtcacgccg
    12781 caaaacgacg gttcggtgat tatcgatggc accgccaacg tgcgggaaat caacaaagcc
    12841 tttaactggc atctaccgga agatgatgcc cgcacggtta atggcgtcat tcttgaggca
    12901 ctggaagaga tccctgtcgc aggcacccgc gtgcgtattg gcgagtacga tatagatatt
    12961 ctcgacgtac aggacaatat gattaagcag gtaaaagttt ttcctgtgaa accgctgcgc
    13021 gagagtgtgg cggagtaacg aaaacggccc tgcattcgca tgcagggccg tgaattatta
    13081 cgaaaacaga aattacgctt ttgctttcgc tacagttacc atcgccgcac gaatcgtacg
    13141 accattcagc gtataaccct tctgcataat gcccagtacg ttacctggcg caacgtcatc
    13201 agattccacc attgcgatag cctgatgcac attcgggtcc agcggcacgt tagtttcggc
    13261 gatcacttca acaccaaact tacgcacaac atccagcatc gacttcagcg tcagctcaat
    13321 gccttcaacc atcgcagaca tatccgggtt agctttatca gccacttcca gcgcacgatc
    13381 caggctatca atcaccggca gcaattcgtt gatgaatttc tccagcgcga atttgtgggc
    13441 tttttcaata tccagttcag tacgtcgacg caggttttcc atttcggctt ttacacgcaa
    13501 aatgccgtca cgttcacggg tctgggcttc agccagctga gcttcgagat tcgcaatttt
    13561 ttcatcgcgc ggatccacct gctcagcaga agcttctggc tcaactgcct caatctcttc
    13621 gtgctgatcc atgataattt cttccggggc ttgcccctca ggcgttttct gttctttact
    13681 actcatgaat ttctccgcgt ttttttcgca ttcatctcgc taacttcgct tattatgggg
    13741 atcagtttca gggtttcaag ggaagcactc acattgtcat caatcttcgc aacaaggacc
    13801 tcggaaaaat gaataatcat ttcaagtgta ttggcattgt gggacaccca cggcacccca
    13861 ctgcactgac aacacatgaa atgctctacc gctggctgtg cacaaaaggt tacgaggtca
    13921 tcgttgagca acaaatcgct cacgaactgc aactgaagaa tgtgaaaact ggcacgctcg
    13981 cggagattgg gcaactagct gatctcgcgg tagtcgttgg tggcgacggt aatatgctgg
    14041 gcgcggcacg cacactcgcc cgttacgata ttaaagttat tggaatcaac cgtggcaacc
    14101 tgggtttcct gactgacctt gaccccgata acgcccagca acagttagcc gatgtgctgg
    14161 aaggccacta catcagcgag aaacgttttt tgctggaagc gcaagtctgt cagcaagatt
    14221 gccagaaacg catcagcacc gcgataaatg aagtggtgct tcatccaggc aaagtggcgc
    14281 atatgattga gttcgaagtg tatatcgacg agatctttgc gttttctcag cgatctgatg
    14341 gactaattat ttcgacgcca acaggctcca ccgcctattc cctctctgca ggcggtccta
    14401 ttctgacccc ctctctggat gcgattaccc tggtgcccat gttcccgcat acgttgtcag
    14461 cacgaccact ggtcataaac agcagcagca cgatccgtct gcgtttttcg catcgccgta
    14521 acgacctgga aatcagttgc gacagccaga tagcactgcc gattcaggaa ggtgaagatg
    14581 tcctgattcg tcgctgtgat taccatctga atctgattca tccgaaagat tacagttatt
    14641 tcaacacatt aagcaccaag ctcggctggt caaaaaaatt attctaattt tacgccagcc
    14701 tctttactgt atataaaacc agtttatact gtacacaata acagtaatgg ttttttatac
    14761 aggaaaacaa ctatgttggc acaactgacc atcagcaact ttgctatcgt tcgtgagctt
    14821 gagattgatt ttcatagcgg catgaccgta ataactggcg agaccggcgc gggtaaatct
    14881 attgcaatag atgccctcgg tctttgtctc ggtggtcgcg ctgaagccga catggtgcgt
    14941 accggcgctg ctcgcgctga cctgtgcgcc cgtttttctc tgaaagatac gccagcggct
    15001 ctgcgctggc tggaagaaaa ccagcttgaa gacgggcatg aatgtttgct tcgtcgcgtg
    15061 atcagcagcg atggtcgctc ccgtggtttc atcaacggta cagctgttcc tctgtcacaa
    15121 ctgcgcgaac tgggtcagtt gctgattcag atccatggtc agcacgctca tcaattactc
    15181 accaaacctg agcaccaaaa attcctgctt gatggctatg ccaatgaaac ctctctactg
    15241 caggaaatga ccgcacgtta tcagttgtgg catcaaagct gccgtgacct cgcgcatcat
    15301 caacagttaa gtcaggaacg cgccgcccgt gcggaactgc tgcaatacca attaaaagaa
    15361 cttaacgaat ttaatccgca gcccggagag tttgaacaaa tcgacgaaga gtacaaacgt
    15421 ctggcgaaca gcggtcaatt gctgaccacc agccagaatg cattggcatt aatggccgac
    15481 ggtgaagacg caaacctgca aagtcagctt tacacggcta aacaactggt gagcgaattg
    15541 attggcatgg acagcaaact gtccggcgta cttgatatgc tggaagaagc taccatccag
    15601 attgctgaag ccagcgatga actgcgccac tactgcgatc gtctggatct cgatcccaac
    15661 cgactatttg aacttgaaca gcgcatctca aaacagattt cgctggcacg taaacatcac
    15721 gtcagccctg aggcattgcc acagtattac cagtcgctac tggaagaaca gcagcaactg
    15781 gacgatcagg ccgactcaca agaaacgctt gcgctggcgg taacgaaaca tcatcagcag
    15841 gcactggaaa tcgcgcgcgc attacaccaa caacgccagc aatatgcaga agaacttgca
    15901 cagttgatca ccgacagtat gcatgcgctc tcaatgccgc atgggcagtt tacgatcgat
    15961 gttaaatttg acgagcatca cctgggcgct gacggtgccg atcgtattga gtttcgggta
    16021 accaccaacc caggtcagcc aatgcagcct attgccaaag tcgcatccgg tggtgaattg
    16081 tcccgcatcg cactggcaat ccaggtcatc acggcgcgta aaatggaaac cccggcactg
    16141 atttttgatg aagtggatgt agggattagc ggtccaacag cggcagttgt cggcaaactg
    16201 ctgcgtcaac tcggcgaatc aactcaggtg atgtgtgtta cccacctgcc acaagtcgcg
    16261 ggatgtggtc atcaacacta ttttgtcagc aaagaaaccg atggtgcgat gacagaaacg
    16321 catatgcaat ccctgaataa aaaagcgcgg ttacaagagc tggcgcgcct gcttggtggc
    16381 agtgaagtca cacgtaatac actggcgaat gcgaaagaac tgcttgcagc gtaaactttt
    16441 ttcctgcttc acggtcagag taaacagcaa aacgccgtaa gaccggaaag caaaaggttt
    16501 taaagtgatg aaaggtctat tatcatcggc atattacaga tgagccacgt actgctcggg
    16561 cccgaaaagg aatcaaatca ctatgcgctg taaaacgctg actgctgcag cagcagtact
    16621 attgatgttg accgcaggct gttccactct ggagcgagtg gtttaccgtc ctgacatcaa
    16681 ccaggggaac tatctgaccg ctaacgacgt atccaaaata cgtgttggca tgacgcaaca
    16741 acaagttgcg tacgcattgg gtacaccgct gatgtccgat ccatttggta cgaatacctg
    16801 gttctatgtc ttccgccagc aaccaggtca tgaaggtgta acgcagcaaa cgctgacgct
    16861 gacctttaac agtagcggtg tgttgaccaa tattgataac aaacctgcgc tgagtggtaa
    16921 ctaataataa agttactctc aaagacgtta aaaaaggtgc tcaatgagca ccttttttct
    16981 gtctgttatt tattcgctga tttttctgct cgttgcctgc gaagctcttt cggatcggca
    17041 atgagagggc gataaatctc cacccgatcg ccatcatgca cactatcgct tagttttgcc
    17101 ggacggctgt aaatgccgac tttgttttta gttaaatcga tatcggtacg caattccagc
    17161 aagccactgg cgcgaatagc ttcttcaacc gtcgcgccct cctgcagcgt cacgcgctgc
    17221 aggtactgct tctcaggtag cgcataagcc acctcaacgg caattttacc tggcactgta
    17281 aacctctttc gcacgaaccg taaaagcctg gaccatatta gacgccagct ctttaaacac
    17341 gcgaccaaag gcgagttcaa tcaacttatt ggtaaactca aagtcgagat gaaactcgat
    17401 acgacacgcc tcctggctca gcggcgtaaa cttccatcca ccaatcaatt tcttgaacgg
    17461 cccatccacc agattcataa gaatactttg gttactggtc aactggttgc gggtagtaaa
    17521 cgttttgctg atcccagcct tagagacatc taccgccgca gtcatctgcc caggagtgga
    17581 ctccagaatc cgacttccgg tacaacccgg caaaaactga ggataagact gaacgtcatt
    17641 cactaactga tacatttgct ccgcgctgta gggtaccagt gcggtccggc taatctgagg
    17701 cataactatt tccatcaaca aaaatccaac aaataatatc atttatcctg ctgtaaaaaa
    17761 aacgctatcc cggcgctggg taacatcggg ttcatgctaa gatagagcct tgtcccccgc
    17821 aggattgata tggggtgttt tcgatttcag attaccgatg attcacgacg cttatgacga
    17881 agaaaaaagc acataaacct ggttcagcga ccatcgcgct taacaagcgc gcccgtcacg
    17941 aatactttat cgaagaagag ttcgaagcgg gacttgccct gcaaggctgg gaagttaaat
    18001 ccctgcgcgc aggaaaagcc aatatcagcg acagctacgt ccttctgcgt gacggagagg
    18061 catttctgtt tggcgctaac atcacgccaa tggccgtggc ctccacgcat gtggtgtgcg
    18121 atcctacccg tacccgcaag ttacttctca accagcgcga actggactca ttgtacggtc
    18181 gcgtcaatcg agaaggctat accgtagtgg cgctctccct gtactggaaa aatgcctggt
    18241 gcaaagtgaa aatcggcgtc gccaaaggta aaaaacagca cgataaacgt tcagatatca
    18301 aagaacgcga atggcaggtg gataaagcac gtatcatgaa aaacgcccac cgttaaacct
    18361 gcactccaat tattgaccag ttcctcaccg cgcctccctc tccggcggcg cgaatgaaca
    18421 tcttattggc tatcacatcc gacacaaatg ttgccatccc attgcttaat cgaataaaaa
    18481 tcaggctaca tgggtgctaa atctttaacg ataacgccat tgaggctggt catggcgctc
    18541 ataaatctgg tatacttacc tttacacatt ggggctgatt ctggattcga cgggatttgc
    18601 gaaacccaag gtgcatgccg aggggcggtt ggcctcgtaa aaagccgcaa aaaatagtcg
    18661 caaacgacga aaactacgct ttagcagctt aataacctgc ttagagccct ctctccctag
    18721 cctccgctct taggacgggg atcaagagag gtcaaaccca aaagagatcg cgtggaagcc
    18781 ctgcctgggg ttgaagcgtt aaaacttaat caggctagtt tgttagtggc gtgtccgtcc
    18841 gcagctggca agcgaatgta aagactgact aagcatgtag taccgaggat gtaggaattt
    18901 cggacgcggg ttcaactccc gccagctcca ccaatcatga ttggacggtg taaggacaac
    18961 accaataaaa acaggaagtt agaagtctca gcaggacacc gaccagacgg tgaggagaca
    19021 taaaaggata cgcaaaggag ccgcggctcc tggtgacatg aaagcccaca gatgtgggct
    19081 ttttcgttga tggtcagaac gaccagttca caccagctac cccgttccac ggggattcca
    19141 caccggcacc atggctatac cccaccccaa gatgcccgct taacgtactg ctgaatgagg
    19201 ctttaatacc tgcttggtat attccacgtc tgcccgacaa atcattgacg aaattaccgt
    19261 cactattcac tttcacccgg ttatcatcga caaattcttt gcgcacagcc gccttcagcc
    19321 acggctcaac ttccataccg ttccccagac gcatgttgta actcagcgtt gcacccagtt
    19381 cacgatataa actgcgggta tcgactgatt tcgattccat gccattggat aaatgatatt
    19441 cagggttatc agcggtgagc cccgttaacg atgcatacgg cgtcaggttc cagttaccat
    19501 cggtaaatcg catcccggtt tcaatgtgcc cccccagccc gttgctgtga taactgccgt
    19561 tggcggctcc accgctgctc attttaccgg ctacgttact ttcaaaacgg ttcagcttca
    19621 cgataccgtc cagatagaaa ccactttcat gttcccaact ggcatagccg cccagagaat
    19681 aactgcccac actgccatgt cctccacgat caaaaccgat atgtgaatgg gaataaccca
    19741 taaaagcgcc cagcgtcgca atcccctcag gaatatcatt acggctgtcg atccccactg
    19801 tcattccggt cagcgtctgc tcaaacccgg cccccgcatc ggtggtgaca ttattacggg
    19861 tgttatacgt tgccccccag acattattgt tgtgtggact cgctttcatt atgttcaacc
    19921 gctcgcgaat actgtttagc tcagcatcaa ataccaacgg taatgttgct gccatattga
    19981 gtacggctgc cgtagaaagc gtaatgcgtt tctccggaac gggtgtcggc gttggatcgg
    20041 gagtcgggtt tggtttcgga tccggttttg ggtctggttt tggatccggc ttcggatttg
    20101 ggttgggatc cgagttgggt ttgacatcat tggtcaggtt ccagttgctg ttgccatcgc
    20161 ttttcaggac atactcatag gtcccaagat caacgaaacc gccagtattg cccagcgaaa
    20221 acgaagcatc ccctctccct gttttcacca gcgtcatcgc gtcgtcagac tgagggctga
    20281 cgccggtatc ctgaacaaag attttaaaat taccagtggc gttgttgctg acgaccagtt
    20341 gatcaccgcg ggagcctgca acgttggtat gcaggtagaa attaccgctg ccggaaagtt
    20401 cattggttgt cagcgtattg tagataccgt tagttgtggc aggcgctgct gtttgtgctg
    20461 ataaataaac atcaccgtcg ttgagtagca aactgtttac tctatattcg cagttgctgg
    20521 tacctgcaca ggaattattg ctgttaagcc agacactgcc ccggctggca gccgtcagat
    20581 cggcaagtgt cgtatcgacg ccatttccga tagttaatgt cgcgctatcg gtaatccgga
    20641 ccgccccttc gagtttaact ggcgtaacat tatcccgtgg cgtcattaac gacaggcttc
    20701 ctgtcgcgcc actgaccgat gcatccgcca gcgtacctgc gtagacgatt gccgtcccgc
    20761 cagcgacctg gagatcttct gcccgggcca gaggctgaaa ctcatctttt gaccgcccaa
    20821 gggtatattg cccgccagag ttaacctttg tggcggagtc ctgacccagg ttttgcattg
    20881 ccccaccctt gccaaccgtg gagtcgcgag cttcggtacc tgctaatacc aataaattac
    20941 cgccattttc cagcaacata ttggtcgcta aattgccaga aatggaaaaa gt
//
LOCUS       DAJVTL010000075        20848 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.076, whole genome shotgun sequence.
ACCESSION   DAJVTL010000075 DAJVTL010000000
VERSION     DAJVTL010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20848
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.076"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(114..686)
                     /gene="hdeD"
                     /locus_tag="OQQ26_002624"
     CDS             complement(114..686)
                     /gene="hdeD"
                     /locus_tag="OQQ26_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-resistance protein HdeD"
                     /protein_id="HCS1858038.1"
                     /translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
                     SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
                     GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
                     VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
     gene            941..1273
                     /gene="hdeA"
                     /locus_tag="OQQ26_002625"
     CDS             941..1273
                     /gene="hdeA"
                     /locus_tag="OQQ26_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeA"
                     /protein_id="HCS1858039.1"
                     /translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
                     VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
                     WDKIKKDM"
     gene            1389..1715
                     /gene="hdeB"
                     /locus_tag="OQQ26_002626"
     CDS             1389..1715
                     /gene="hdeB"
                     /locus_tag="OQQ26_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HCS1858040.1"
                     /translation="MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFID
                     LNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQA
                     SNDLPN"
     gene            1779..2426
                     /locus_tag="OQQ26_002627"
     CDS             1779..2426
                     /locus_tag="OQQ26_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HCS1858041.1"
                     /translation="MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSAL
                     FMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIW
                     VTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSML
                     DWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS"
     gene            complement(2468..2998)
                     /locus_tag="OQQ26_002628"
     CDS             complement(2468..2998)
                     /locus_tag="OQQ26_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709290.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1858042.1"
                     /translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVI
                     IDTLMNNVFHSNFLTQIERLKPVHVIVFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
                     NGSYCSVPEANVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNL
                     KRINELVRHQHIDYLV"
     gene            complement(3154..3720)
                     /gene="slp"
                     /locus_tag="OQQ26_002629"
     CDS             complement(3154..3720)
                     /gene="slp"
                     /locus_tag="OQQ26_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein Slp"
                     /protein_id="HCS1858043.1"
                     /translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
                     PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
                     DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
                     YGAFWPEPGWGAPYYTNAVSQVTPELVK"
     gene            complement(4075..5189)
                     /locus_tag="OQQ26_002630"
                     /pseudo
     CDS             complement(4075..5189)
                     /locus_tag="OQQ26_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312403.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5817..6242)
                     /gene="arsC"
                     /locus_tag="OQQ26_002631"
     CDS             complement(5817..6242)
                     /gene="arsC"
                     /locus_tag="OQQ26_002631"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-dependent arsenate reductase"
                     /protein_id="HCS1858044.1"
                     /translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDEL
                     VKLIADMGISVHALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTTLG
                     TRLCRPSEAVLEILPDAQQGAFTKEDGEKVVDEAGNRLK"
     gene            complement(6255..7544)
                     /gene="arsB"
                     /locus_tag="OQQ26_002632"
     CDS             complement(6255..7544)
                     /gene="arsB"
                     /locus_tag="OQQ26_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite/antimonite:H(+) antiporter ArsB"
                     /protein_id="HCS1858045.1"
                     /translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
                     DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
                     AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
                     NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
                     KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIATVGALILFVVAKRGHAINTGKVLR
                     GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSI
                     MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
                     KNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL"
     gene            complement(7599..7952)
                     /gene="arsR"
                     /locus_tag="OQQ26_002633"
     CDS             complement(7599..7952)
                     /gene="arsR"
                     /locus_tag="OQQ26_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HCS1858046.1"
                     /translation="MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQ
                     PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRN
                     LARQNCSGDSKNICS"
     gene            complement(8494..8667)
                     /locus_tag="OQQ26_002634"
     CDS             complement(8494..8667)
                     /locus_tag="OQQ26_002634"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858047.1"
                     /translation="MHPLTHPLPVTAHVSLLDDDYLTPARASVNGTTRTSDQNFESVY
                     AHYQSENASELTG"
     gene            8695..8778
                     /locus_tag="OQQ26_002635"
     CDS             8695..8778
                     /locus_tag="OQQ26_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Damage inducible protein"
                     /protein_id="HCS1858048.1"
                     /translation="MIDKAIIVLGALIALLELIRFLLQLLN"
     gene            complement(8832..10184)
                     /gene="gorA"
                     /locus_tag="OQQ26_002636"
     CDS             complement(8832..10184)
                     /gene="gorA"
                     /locus_tag="OQQ26_002636"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HCS1858049.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
                     LGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHSDIPGVEYGIDSDGF
                     FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
                     VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLTEQQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGPEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
                     "
     gene            complement(10259..11101)
                     /gene="rlmJ"
                     /locus_tag="OQQ26_002637"
     CDS             complement(10259..11101)
                     /gene="rlmJ"
                     /locus_tag="OQQ26_002637"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase"
                     /protein_id="HCS1858050.1"
                     /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
                     ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSW
                     IVPE"
     gene            11304..13346
                     /gene="prlC"
                     /locus_tag="OQQ26_002638"
     CDS             11304..13346
                     /gene="prlC"
                     /locus_tag="OQQ26_002638"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HCS1858051.1"
                     /translation="MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQG
                     APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPQLSEYSTWVGQ
                     HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
                     NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
                     FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     SWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
                     PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
     gene            13354..14106
                     /gene="rsmJ"
                     /locus_tag="OQQ26_002639"
     CDS             13354..14106
                     /gene="rsmJ"
                     /locus_tag="OQQ26_002639"
                     /EC_number="2.1.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase
                     RsmJ"
                     /protein_id="HCS1858052.1"
                     /translation="MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
                     RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
                     AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
                     ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
                     RPDYAPPLANVATPNAVVTKGHRFDIYAGTPV"
     gene            complement(14155..15624)
                     /gene="dtpB"
                     /locus_tag="OQQ26_002640"
     CDS             complement(14155..15624)
                     /gene="dtpB"
                     /locus_tag="OQQ26_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HCS1858053.1"
                     /translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
                     LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
                     LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
                     SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
                     LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
                     EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPILAGIYT
                     HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
                     ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
                     LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
     gene            complement(15941..16375)
                     /gene="uspA"
                     /locus_tag="OQQ26_002641"
     CDS             complement(15941..16375)
                     /gene="uspA"
                     /locus_tag="OQQ26_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HCS1858054.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            16766..17101
                     /gene="uspB"
                     /locus_tag="OQQ26_002642"
     CDS             16766..17101
                     /gene="uspB"
                     /locus_tag="OQQ26_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HCS1858055.1"
                     /translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
                     DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
                     SLIALMIWH"
     gene            complement(17172..18671)
                     /gene="pitA"
                     /locus_tag="OQQ26_002643"
     CDS             complement(17172..18671)
                     /gene="pitA"
                     /locus_tag="OQQ26_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HCS1858056.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
                     VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
                     HPALLKRATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
                     DQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
                     SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
     gene            18903..20105
                     /locus_tag="OQQ26_002644"
     CDS             18903..20105
                     /locus_tag="OQQ26_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HCS1858057.1"
                     /translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
                     CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVVKDETGFTLDLNGMTVGCEKLVIATG
                     GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
                     ENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
                     QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIAAKSS"
     gene            complement(20420..>20848)
                     /locus_tag="OQQ26_002645"
     CDS             complement(20420..>20848)
                     /locus_tag="OQQ26_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 family protein"
                     /protein_id="HCS1858058.1"
                     /translation="TIVHQTRNTFSSKEHWLWCYWVIFLGTITVLQGIYVLVSSDASA
                     RLAPGIILICLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPVFTCLFCLFLASFLA
                     EMAQTDMGYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK"
BASE COUNT         5517 a         4932 c         5147 g         5252 t
ORIGIN      
        1 gtaattattt caatgatagt gcgcaattga tctacaacac tgcgtagcgg agagagtatt
       61 aatcggatca tagtcacatc aagttactat gatccgggtg acaaccgggg taattattgc
      121 tgcttaacga acaaactggc gaagctgaac aggctggcgg cgctaaatat cagttcaatt
      181 cccaccagtg tggaaaccag cgttacagac accatcggcg ttgcaccaag gaatatccag
      241 gcaatgacga tatccagcac accaataacg agctgtagcc agctgccttt cattgaacgc
      301 tgacgatacc aactcatcag gcgaataacc cctgcaacac agaacaaacc ggcaataaat
      361 gccgcaatgg caaaaatgcc cagctccggt gcgcggatga agaaatagcc gatcaataaa
      421 taggcgactg cgacgaggaa accggataat accggccaga aattatgact gcggttgctg
      481 aataacccga caataagcgc aatacccgag cagattaata atgcacccac tactgtgctt
      541 aaaatatcgc cagagacgaa cgggaaactg atacacagca acccgacgat aaacagcagc
      601 acggcaataa actggattgc tctgcgatgc tttttcagca tctccagatc aaacttcaaa
      661 attgttgcct tatctatata taacatagaa ccaccctata aaattaagaa gaaaatcccc
      721 tgctatcaat ctatgccaaa aacgcgtcta agaatgcagt cgatttaata aaaatttcct
      781 aattgcagta tctgatgcat ctgtaactca ttgtattgaa ataaaaatat ctgattttga
      841 tattttccat caacatgaca tatacagaaa accaggttat aacctcagtg tcgaaattga
      901 ttcgtgacgg ctctttcact ttatagttga ggatattacg atgaaaaaag tattaggcgt
      961 tattcttggt ggtctgcttc ttctgccagt tgtgagcaat gcagcggatg cgcaaaaagc
     1021 agctgataac aaaaaaccgg tcaactcctg gacctgtgaa gatttcctgg ctgtggacga
     1081 atccttccag ccaactgcag ttggttttgc tgaagcgctg aacaacaaag ataaaccaga
     1141 agatgcggtt ttagatgttc agggtattgc aaccgtaacc ccagctatcg ttcaggcttg
     1201 tactcaggat aaacaagcca actttaaaga taaagttaaa ggcgaatggg acaaaattaa
     1261 gaaagatatg taattccggg aatgcgttac atcgtacttc cttgcatatt gaacaggccg
     1321 gaatatcttc tttaaaagca gctattcctc ctgttcatat ataatctcta tattgaatgg
     1381 gttacaaaat gaatatttca tctctccgta aagcgtttat ttttatgggc gctgtagcgg
     1441 ctttgtcact ggtgaacgca caatctgcgc tggcagccaa tgaatccgct aaagatatga
     1501 cctgccagga atttattgat ctgaatccaa aagcaatgac cccggttgca tggtggatgc
     1561 tgcatgaaga aacagtatat aaaggtggcg ataccgttac tttaaatgaa accgatctca
     1621 ctcaaattcc taaagtgatc gaatactgta agaaaaaccc gcagaaaaat ttgtatacct
     1681 tcaaaaatca agcatctaat gacttgccga attaatgagg tacaagtaaa aaggagtagc
     1741 aagttgagcc atcttgctgc tcctttttgc atttttatat gacagcagaa tttattatac
     1801 gtcttatact cgcggcaatt gcctgtggcg ctattggcat ggaaaggcaa atgcgcggca
     1861 aaggagcagg gttacgcaca catgtattaa ttggcatggg aagcgccctg tttatgattg
     1921 tttcgaaata tggttttgct gacgtgctgt ctttagatca cgtcggactc gaccccagcc
     1981 gtattgctgc tcaggtggtg acgggcgtcg ggtttatcgg tgcaggtaac attctcgttc
     2041 gtaaccaaaa tattgtaggt ctgacgacgg cagcggatat ctgggtgacc gccgccatag
     2101 gtatggttat tggcagcggt atgtacgaac tgggtattta tggttcagtg atgaccttgt
     2161 tggtgctgga agtcttccat caattaacct tccgcctgat gaacaaaaat taccatttac
     2221 aactgacatt agtgaacggt aatacggtat caatgctcga ctggtttaag cagcaaaaaa
     2281 taaaaactga tttagtttcg ttgcaggaaa atgaagatca tgaagtggtc gccattgata
     2341 tccagcttca tgccacaacg tcgatagaag acctgttgcg attattaaaa ggtatggcag
     2401 gggtgaaagg cgtttcaatt agctaatctg tgtggcagcg tagccagact cactgtaagc
     2461 ctgaaattca caccagataa tcaatatgct gatggcgtac cagctcattg atccgcttaa
     2521 gattgaggat catcatgata ttgtgtttat ggcagtagaa cgtttttagc gatattttca
     2581 gtttctccag aatatcttca gttgtcattt gattcgcaat gcagctcaga acctgatgtt
     2641 gcttgcgcga aagtgacaca ttcgcttcag gcacagagca gtaactgcca ttgatgagtg
     2701 cgacaaaatc aatgatagtg atagtccgcg gaacaaaggt caccggtact ttccccagac
     2761 agcgtttaat attaaagggg gagaaaacaa tgacatggac aggttttaat cgttcaattt
     2821 gagtgagaaa attagaatga aatacattat tcattaatgt atcaataatg acgaaggcat
     2881 tctgatgcaa cattacgtcg atctcttctt cgttctgtat atgaacgaca ttacctttac
     2941 tcagaatgtt tttcatcgcg gtgaagaaca tcgtatccct ggtaattata agaaacataa
     3001 ccgactcctg gtgcggacat taactttata atcagtttgc caaaggtaat taacaggaca
     3061 gggcttataa taataatagt tagcttactg tatattaatt ttatgtaata catgatgcag
     3121 atgctgagaa agcatctgca tctttcggtg gtgttatttg accagctcag gtgttacctg
     3181 actcaccgca ttggtgtagt aaggcgcacc ccagcccggt tccggccaga atgcaccata
     3241 gccgtaatcc cacaggttat aggtggtatt aaccacttct ctcaaatgcc acacctggat
     3301 gccctgcata ttcacttcca ggaagttata cgggacttta ttgataaagc ctggttgttc
     3361 accctgaatg gtaccgagga tggtaacaaa gtgattacga tagttcactg ggtcaaggaa
     3421 gccgctttgt ctggcgagca gtcggccctg atagttggct tcaatatcag gtttcgcata
     3481 gctatccaac ggtaatacag cgatttctaa caacgtatcc gttttgccat tgataacgtt
     3541 gataaccttc ccgccaaagc gcgcttgttg accaacatat aaccccggct ggttatgaac
     3601 agcaacaaaa cttttttgaa tatcaggttg gttattgcct ttgatatttt gcggaattga
     3661 actacatgcg gcaagcaaaa atgaaaggct gaggatgagt gcaccttttg tcatgttcat
     3721 gttactatcc ttatcaacaa atattaaaac cataatagat atttctttat agttttcatc
     3781 tgattctgag gtgatatgcc tgatagtaac gtaaacctgt ctgatgttta tatcctttct
     3841 atttaggtga actcagttaa ttttggggca tgacatgagt atccatcgcc ccataatata
     3901 gcgctttgtt ttaaaaatac ataaaatcta tttttattca atgattataa agtgctaata
     3961 ataaacatta tggtattata ttcttataat gatttgataa gcgaattctt ttgccagatg
     4021 gtatttctat ttccacccca taatttatat ctttttcatt aggaagtggc ctctttaaat
     4081 aaggcgtgtg tgacattttt ttgggttaag cgtctcgtat atcaatactt cgaattgata
     4141 ttcagacatt tctgcccatg tttgagtttt attgtatcgg gagagtgtcg taaaggtttt
     4201 aacttactta taacattgtt tttggaattc ttgctgatat tttaatatgt cattgtatga
     4261 aagattggtt atcctggcct ctaagaattt aattattgtc gaagcaattt ccgcttttgc
     4321 tcgtaaaaag ttgtcattaa tggttaataa tgttgaaaat aaaccttcga tttgtttgtc
     4381 aagatattgt tcgtctttat ataattttgg ggtagggtgt tctttatgta aaaaaatagt
     4441 gtcacttaaa tttgcgtcag tgaaatttat attaagtaga tcttcgaaat aaaaccttgg
     4501 caaggttaga acgaacccgg acaggttctg tcctgtcata ttgaaatcaa taaagttgtt
     4561 ccggcaaaga ctttcatcct gtttttattt tcactgtgtt caatatataa ctttgtcatt
     4621 ttttgataca ggctttgaat atcttttata ttagtcggta agtcagctcg ttgttcagca
     4681 ataaaattag tatctgaaaa catggtttgg acactgaatc ttactggtat tccctcttct
     4741 acgctaattt tagttatgat tgccttgtcg ggtttaggat tagcgacaac aatgattcga
     4801 cattccgcac ttttgttttt ttcatatcta atgttattaa tctgattaag tattgattgt
     4861 gtctgttgcg taagttgtgt cgaacttatc gtttcaatgt tagtaataag acttacaagt
     4921 tgagccacaa cttttgagta gtctgcattt gtatatgtag tgttcgtgtg gcacgcatta
     4981 atttgttgaa gttggtgttg cgctaaatca tattgatcag agatatatcc ttctccagag
     5041 aatgtggaat taatggggtg ttgttcttcc caattatcgc aaggccactt cggtgtgtct
     5101 ggcgttttag tattatcggt atttgttgtg cagttataaa tatcgccgtg atatgtattt
     5161 attatacctg gggtaaagtc aattgacata aaattcctta ttcatcattt gttttatgct
     5221 aagatgttta aattggataa ttagaacagg aatggatttt cttctacaca caataaatgt
     5281 aatgcgttat atcttcctga tataattacc tttgatttcc cttttatctc cacccggtaa
     5341 tatttgtgta taaaaaaagg tagtgatagt atcgtaaagg aaatcgttaa caactatcaa
     5401 aatgcgctca ttttaaaaag ttattatgtt ctctgatagt gtgtgaagtg attttttttg
     5461 tgatgtttta gatgtgtaat aataaaatgg gttaaggtat cttataatta tttaataatt
     5521 tgttgtgtaa accactgata aatcataatc cagtacgtct ttaaactact gcgctgtatc
     5581 gctgataact aagcagctca ctgatacacc atgctggacg cgataattgg aatctcacgc
     5641 agggagtact gtataaatag caaaatcgcc agatgcgcta cgcctgtcag gcctacaaat
     5701 aacatactat tcatcgaatt ttcataactt tgtaggtcgg ataagacgcg ccagcgtcgc
     5761 atccgacata aataaagcgc acttttctaa caacctgtgg gggggatata gccgctttat
     5821 ttcaggcgat tacccgcttc atcaaccact ttctcgccgt cttccttggt gaacgcgcct
     5881 tgttgcgcat ctggcagaat ttccagcacg gcttctgaag gacggcacag gcgagttccc
     5941 agcgtcgtca ccacaatcgg gcgattaatc agaatcgggt gctgaagcat aaagtcgatt
     6001 aaccgatcgt cagtaaattt atcttccgca aggcccagct cctcatacgg ctcgacgttt
     6061 ttacgcagca gcgcgtgtac ggaaatcccc atatcggcaa tgagtttgac cagttcatcg
     6121 cgcgttggcg gagtttccag ataatggata atggtcggtt ctgtgccgct gttgcggatc
     6181 atctccagcg tattacgcga tgtgccgcag gccgggttgt gataaatggt aatgttgctc
     6241 atatcaatat ctcattacaa agtgaaagag agacgtagcg ccagcgcagc cagcgtcaca
     6301 aacagcacag gcagggtcat gataatccct gtacggaagt aatatcccca gctgatagtc
     6361 atattcttct gcgaaagtac gtgcagccag agtagcgttg ccaggctacc aatcggggta
     6421 attttcggcc ccaaatcgca gccaatcacg ttggcataaa ccatcgcttc tttgataacg
     6481 ccagatgccg tgctgccatc aatggacaac gcgccaacca gtaccgtcgg catattgttc
     6541 ataatagaag agaggaaggc ggtgaggaat ccggtgccga gcgtcgcggc ccacaggccg
     6601 ttatccgcca gcacgttgag tacgccagaa agatattccg ttaatccggc attgcgcagg
     6661 ccataaacca ccagatacat gccgagcgag aagatgacaa tctgccaggg ggcaccgcgc
     6721 aggactttac ccgtattaat cgcatgaccg cgtttagcga cgacaaataa tatcagcgcg
     6781 cccacagttg caatggcgct caccggaatg ccgagcggtt ccaggacgaa aaatcccacc
     6841 agcagaagca gtaaaacaac ccagccagtt ttgaacgtag caggatcttt gatcgcttct
     6901 gcgggagatt tcagcagcgc catatcgtag ttctgcggaa tatctttgcg aaaatagaga
     6961 tgtagcatca ccagcgtggc aacaatcgcg gcgatatcca ccggcaccat caccgaggcg
     7021 tattcgcgaa agccgaggcc aaagaaatca gcggaaacga tattcaccag gttggagaca
     7081 ataagcggca ggctggcggt atcggcaatg aatccggccg ccatcacgaa cgccagcgtc
     7141 gtgcctttac tgaatcctaa agccagcagc atggcgatga caatcggcgt caaaataagc
     7201 gccgcgccat cattggcaaa cagggccgca acggcggcac cgagcaggac aatccaggta
     7261 aacagcaagc gaccgcgtcc attgccccag cgtgaaacgt gcagcgctgc ccattcaaaa
     7321 aagccggact catccagcag caggctgatg ataatgacgg cgataaacgc agccgtcgcg
     7381 ttccagacga tattccacac caccggaata tcacccggat ggaccacgcc cgtaactaac
     7441 gccagtactg cgccgagcgt tgcactccag ccgatgccta aacctttcgg ctgccagata
     7501 accaatacga tggtcaggac aaagatagcg cctgccagta acataatgcc tcccggataa
     7561 aacacatctg aaaattcata tgtgtttagc taaatttttt aactgcaaat gttcttactg
     7621 tccccggaac agttttgtcg agccaggttg cggacaattg cctgaatctt ttcctgttca
     7681 catcgccagg cttcatcaat aattttcgcg gcccatgctg gaatatgcgg cgataagcgg
     7741 taatgaaccc acttaccttg cttgcggtcc agcaatagcc cgctttcacg cagcaatgcc
     7801 agatggcggg atatcttggg ctgcgactga tcgagggcag tgcagagatc gcagacgcat
     7861 aactctccca gttcgctaag cagtaaaacg atgcccagac gggtttcatc agcaagaatt
     7921 ttgaacaatt ggatgggtaa cagaaatgac atattgcgct cctgattgtt gcaggtagtg
     7981 tctctcttcg aagcggataa gtcaaaaaca tatatgactt aacgaatgtg taagtgcaga
     8041 agatggcaat aggtgtgaat tttgagttgg ctattcattt gaaaggaggt ctgaatcagg
     8101 acgtaaaaaa accgactttg cgtcggtttt ttactttcca gccctgagtt ggtggctctg
     8161 gccggagtga gagagttctt atctaacagc tcaatactat tagccagtgg ctaacattgc
     8221 aagcgttagc gatttcttca gctggagaag ggacagtttg ctatatatgt tggtgaaaga
     8281 ggatttatat actttcatcg ggtcgctgcc gtaccaagct ttgtccgaat ccggacgtaa
     8341 aaaaaccgac tttgcgtcgg ttttttactt tccagccctg agttggtggc tctgactgga
     8401 gtgagatagc catcatctaa cgcatcaatg ctaataccat actgaaacta ttgcaaggac
     8461 atgctggttt tataacccgc aagtactgta tgattatcca gttagctctg aggcattttc
     8521 actctggtaa tgcgcataaa cgctttcaaa gttctggtca gaagtacggg tggtgccgtt
     8581 aactgatgct ctggccggag tgagatagtc gtcatctaac aatgagacat gcgccgtgac
     8641 aggcagtgga tgagtaagcg gatgcattct cactccatcg catggagaaa acgggtgatt
     8701 gataaagcaa tcatcgttct tggggcgtta attgcgctgc tggaactgat ccgctttctg
     8761 cttcagcttc tgaactgata gcggaaacgt aattaagggc taagagcaca ctactcttag
     8821 ccctttaaca tttaacgcat tgtcacgaac tcttctgccg ccgttgggtg aatggcgacg
     8881 gtattgtcga agtctttttt ggttgcaccc atcttcagcg ccaccgcgaa gccctgcaac
     8941 atttcgtcca taccaaagcc aatgccgtga ataccgacaa tcttctcttc cggtccaacg
     9001 cataccagct tcatgcggca cggctggcgg tgagtggtga cggcggtata catcgcggtg
     9061 aaagaggatt tatacacttt cacctgatcg tcgccgtact gctcgcgcgc ctgctgttcc
     9121 gttaaaccaa cagtaccaat cggcggatgg ctgaagacca cggtcggaat gttgctgtaa
     9181 tccagatgct catccggctt gttattaaac aggcgttcag agagacggcg acccgctgca
     9241 acagccaccg gtgtcagttc tactgcaccc gtgttatcgc ccaccgcgta aataccttca
     9301 atgttggtgt tttgatattt atcgacgacg atatagcctt tttcgttggt tttaacgcca
     9361 gcggcttcga ggttgatgtt gtcattggca ggctcgcgac caatcgccca aatcaggcaa
     9421 tccaccgttt cactgcgacc atcttccagc tccagcgtca ggctaccatc ggcatttttc
     9481 actaccgctt tcgggatggc gttggtgtgc aactgcgggc cttcggcgtt catcacttcg
     9541 accaacgttt cagagatcat cgggtcgaag ctgcgcagcg gcgcatgttt acgtacaaac
     9601 agatgcgttt tcgcgcccag gccgttaatc acgcccgcca gttcaacggc gatgtaacct
     9661 gcgccaacaa ccgccacgcg ctctggcaaa gcaggaaggg cgaagaagcc atcagaatca
     9721 ataccgtatt ccacgcccgg aatatccgag tggctcggac gaccgccggt ggcgatcaga
     9781 atatgatcgg ctgtgatggt ttcgccgttt acttccagcg ttttggcatc aacgaagcgg
     9841 gcaaagcctt tgattacatc aacgttattt ttaccgagca cgttttcata ggaagtatga
     9901 atacggtcga tataggcggt acggctggcg atcaacgttt cccagttgaa tttattgata
     9961 gtggtatcga aaccataatc cggaccgtac atgtggatcg cttcacggat ttgcgccgcg
    10021 tgccacatca ctttcttcgg tacgcagccg acgttcacgc aggtgccgcc cagctctttg
    10081 gcttcaatca gtgcgcattt ctggccgtac atagccgcgc ggttgatgga ggcgataccg
    10141 ccgctgccgc cgccgatggc gatgtaatca tagtgtttag tcatgacata gtgtccttat
    10201 cgttgattac cgcgattgta gcgcgagacg taataggtgg tgccagcaat ggctgcaatt
    10261 actccggcac gatccagctt acggtggcgt gcccggtgcc tgccggaacc agtttgctgt
    10321 gcagccacgg cagcacgtta ttcatctgct gttccagctt ccacggcggg ttaatcacaa
    10381 tcatgccgga agcggtcatg cctcggcgat cgctgtctgg cagtaccgcc agttcaattt
    10441 gcagaatttt gcgaatgccg gtcgcttcca ggtcgtggat catgcgctta atttgctggc
    10501 gcagcaccac tggataccac aatgcgtaag tgcccgtggc gaaacgtttg taaccttctg
    10561 ctatcccgct gaccaccgcc tgatagtcgg ttttcatttc atacggcggg tcgataagga
    10621 ttaaaccacg gcgagaaacc ggcggcagtt tggccttaag ttgctggaaa ccgtcggctt
    10681 tttctacgcg tgcacggctg tctttctgaa attcagaacg cagcaacggg taatcgctcg
    10741 ggtgcagttc ggtcagttgc aggctgtctt gttcgcgcag tagctggcga gcaatcaacg
    10801 gtgaaccggg gtagtaacgc aactgaccgc tacggttgaa gtgttttacc acattgatgt
    10861 acgcctccag ctccgcaggc aaatcgtcct gctgccagat acgggcgata ccttcgagat
    10921 attcgccggt acgctcggca tgttcgctgc ctaactgata acgcccggcc cctgcgtggg
    10981 tgtcgagata gagaaacggt ttatctttct ctttcagcga ctcgatgatc aggctctgaa
    11041 cggtatgttt aaggacgtcg gcgtggttgc cagcgtgaaa gctgtggcga taactgagca
    11101 tgggtaaagg tgttccggta agtaaaaatc ggcccgtatt cggggcgcac aaaagcctat
    11161 caggacagta taccgaaaag aggccgccgc cgcgaaagcg taacgtttct cattgaaatt
    11221 cactacactt aaccccatgc tacacacatt atgtaaagcg cccgttgagc gcttccctaa
    11281 cctctttaac caggactgcg ctaatgacga atccgttact gactcccttt gaattgcctc
    11341 cgttttctaa aattctcccg gaacatgtcg ttccagccgt gacgaaggca ttgaacgact
    11401 gccgcgaaaa tgtggagcgc gtagtagcgc aaggggcacc gtacacctgg gaaaatctct
    11461 gccagccgtt ggcggaagtg gacgatgtgt tggggcgtat cttctccccg gtcagccacc
    11521 tgaactcggt gaaaaatagc ccggaactgc gtgaagccta cgaacaaacc ctgccgcagc
    11581 tgtcggaata cagcacctgg gtagggcaac atgaagggct gtataaagcg tatcgcgacc
    11641 tgcgcgatgg cgatcattac gccacgctga acacggcgca gaagaaagcg gttgataacg
    11701 cactgcgcga cttcgaactc tctggcatcg gtctgccgaa agagaaacag cagcgttacg
    11761 gtgagattgc cactcgtctt tccgagctgg gcaaccagta cagcaacaac gtcctcgatg
    11821 cgacaatggg ctggaccaaa ctcgttaccg acgaagcgga actggcgggg atgccagaaa
    11881 gcgcgctggc tgcggcaaaa gcccaggccg aagcgaaaga acttgaaggc tacctgctga
    11941 cgctggatat cccaagctac ctgccggtaa tgacctactg cgacaaccag gccttgcgtg
    12001 aagagatgta tcgagcttat agcacccgcg cctccgatca aggcccgaac gccggtaaat
    12061 gggataacag caaggtgatg gaagagatcc tcgctctgcg tcacgaactg gcgcaactgc
    12121 tgggctttga aaactacgcc tttaaatccc ttgccactaa aatggcagaa aacccgcagc
    12181 aggtgcttga tttcttaacc gatctggcaa aacgcgcgcg tccgcaaggc gaaaaagaac
    12241 tggcacaact gcgtgccttc gccaaagccg aatttggcgt cgatgagttg cagccgtggg
    12301 atatcgctta ctacagcgaa aaacaaaaac agcacctcta cagcatcagt gacgaacagc
    12361 tgcgtccgta cttcccggaa aacaaagcag ttaacggctt gtttgaagtg gtgaaacgta
    12421 tttacggcat caccgctaaa gagcgtaaag atgttgatgt ctggcatccg gatgtacgtt
    12481 tcttcgaact gtatgacgaa aataacgaac tgcgcggcag cttctacctc gatctgtatg
    12541 cccgtgaaaa caaacgcggc ggggcgtgga tggatgactg cgtaggccag atgcgtaaag
    12601 ccgatggttc tctgcaaaaa ccggtcgcgt atctgacctg taacttcaac cgcccggtga
    12661 atggtaaacc ggcgctgttc actcacgacg aagtgatcac tctgttccat gagttcggtc
    12721 acggcctgca tcatatgctt acccgcattg aaaccgctgg tgtgtctggt atcagcgggg
    12781 tgccgtggga tgcggtcgaa ctgccgagcc agtttatgga aaactggagc tgggagcctg
    12841 aggcgctggc gtttatctcc ggtcactatg aaaccggcga accgctgccg aaagagttgc
    12901 tggataaaat gctggcggcg aagaactacc aggcggcgct gtttattctg cgtcagctgg
    12961 agttcggcct gttcgatttc cgcctccatg ccgagttccg cccggatcag ggtgcgaaaa
    13021 tcctcgaaac tctggcagaa atcaagaaac tggttgccgt agtaccgtct ccatcctggg
    13081 gccgtttccc gcacgctttc agccatattt tcgccggtgg ttatgccgca ggttactaca
    13141 gctacctgtg ggctgacgta ctggcggcgg atgccttctc gcgttttgag gaagagggca
    13201 ttttcaaccg tgaaaccggg cagtcgttcc tcgacaacat tctgagccgt ggcggttcag
    13261 aagagccgat ggatctgttc aaacgcttcc gtggtcgtga accgcagctg gatgcgatgc
    13321 tggagcatta cggcattaag ggctgatcat tcagtgaaaa tctgcttaat tgatgaaaca
    13381 ggcaccggag acggtgcctt atctgttctg gcggctcgct gggggctgga gcacgatgaa
    13441 gacaacctga tggcgctggt gttaacgccg gaacatctgg aattgcgcaa gcgtgatgag
    13501 ccaaaacttg gcggcatctt tgttgatttt gttggcggag cgatggcgca ccgtcgcaaa
    13561 ttcggcggtg gtcgcggtga ggcggtggcg aaagcggtgg gcattaaagg cgattatttg
    13621 ccggacgtgg tggacgctac cgcagggctg gggcgcgatg cctttgtgct ggcttcggtc
    13681 ggctgccgcg tgcggatgct ggagcgtaat ccagtcgttg ccgcgctact cgacgacggc
    13741 ctggcgcgtg gatatgcgga tgcggaaatc ggcggctggt tgcaggagcg tttgcagtta
    13801 attcacgcct ccagcctgac ggcgctgact gatattactc cgcgcccgca ggtggtctat
    13861 ctcgatccga tgttcccgca taagcagaaa agcgcgctgg tgaaaaaaga gatgcgtgtc
    13921 tttcagtcgc tggtggggcc ggatcttgat gccgatggat tgctggagcc tgcacgcttg
    13981 ctggcgacca aacgcgtggt ggtaaagcgt ccggactacg cgccaccgct ggcgaatgtc
    14041 gccacgccaa acgcggtagt cactaaaggg cataggtttg atatttatgc cggaacgccg
    14101 gtgtaaaagt aaagcagggt agcgataacg ctaccctgct ttctgcaaga ataattaatg
    14161 gctttccggc gtcgcaatca tgcgtttcag ccacggcacc atcaacagca tcactactgc
    14221 aacgcccagc gtgaccagac caatcttacc aaacacgttg gtatagacgg gcaacgtctc
    14281 aagcggatcg gtaatgttgt ccggcaccgc ggtaaatgtt gccacatagc cgcccagcaa
    14341 gaacgcggca gcctgcgtca ggaaccacat cccgagaata aagcccatca aatgctgcgg
    14401 caccagggca gcaatcatcg ccaggccaag ggcgctaata aacaattcac ccaggctctg
    14461 gaataaatac accagcacga taaaccatgg cgatgtcagc ccctgggcat ccgcaaacca
    14521 cattcccgca gctgcagccg tcaaaaagcc cagagaacac ataaacatgc cgagagtaaa
    14581 tttcatcggc atcgagaggt ctttgccttt gttacccaga tgcgtgtaaa tgcctgccag
    14641 tattgggctg gcgagtacca cccagaacgg gttaagcgcc tggaagctga ccgggtttat
    14701 ggaaaagccg agaatttcat gatgcacgtt gttgatggca aagaagttca gcgacgttgg
    14761 catctgggcg tagagaatgt aaaacaccac cgcttcgagc atcaggacaa aggcgacaaa
    14821 cattttattg cgcccggttt tatccagctt gaatgcctga cgaaagaaga tgatggtgac
    14881 gacgatggag agaacaatca gcaccagatt ggcgacttct acgttgtgca tcagccatgc
    14941 acatacgaag atcatcacca cgctgccaag taatacgtac aacagtttgc tgaagctcat
    15001 cggcttgaag tcgggttcag aaccaatgtc tttcaccatt ccacgacagg cgatgtaaac
    15061 cagtaatgcg ataattaacc ccgccccgca caggttgtag gtgactgaat aaccgaatct
    15121 atcagcgatc acaggggcca gcgataacgc tatcaacgag ccgatattga tcgacatata
    15181 gaacagggtg aatgcgccat caagccgcgg atctttcggc ggatagcact tcgaaagcaa
    15241 gctggctggg ttagctttaa acaggccgtt accgacagcg atagtcccca gggcgatgaa
    15301 aatcaggtca ggcttaagta gcgacatgcc ggtcatgaag tagccaatcg ccagcacaag
    15361 tgctccaaga acaatggtgc gtttggtccc caacaggtgg tcgccgacat agccgccaat
    15421 ggaaatgagg ccatagacca gtgcagcaaa agcaccaaaa gtgacaaaag cctgctcttg
    15481 cgagaatcca agctgtttaa cgaagaaaac cgccagtacg ccctgcacgc cgtagtagcc
    15541 gaatcgctcc cataactcga caaaaaagat catgaaaaat gggcgaggtt gctgcagcat
    15601 ccccatgggt gttgttgtat tcatatttat taaccttcca ataccatcct gaaaagtatg
    15661 aacgcgtaag ggataacgcg cgaaaaagtt tacatctgtc agagattctt aatattgatg
    15721 cggtgaatag attaatacac tattacaaca gaaaataacc agctgatcac actaatgatg
    15781 gaaaatatga tggtgttaaa tgttgtattg gcaggagatt ttgattgcgt acgcagatcg
    15841 taggccagat aaggcgttta cgctgatcag gtaacaaggc gcgccaaaaa gcaaaacgcc
    15901 cgcatatgcg ggcgttcagg aacacgtcgt ggagggaaga ttattcttct tcgtcgcgca
    15961 gcggaacaat cagcatatca acgtgaacgg tgttgatcag ctgacgtgcg gaagacatca
    16021 gtttgctcca gaagtcctgg tggtgaccac aaaccaccag atccatatcg tatttcttga
    16081 ttgcatcgac cagaacctgg cccaggtcgc cgctgccgct cagggtttca gtgattgggt
    16141 agcctgcatt agtggaaagc tcggtcagcg catgatgtgt ctcttcagag atgcgtttct
    16201 gcatatcacc cagattcaca tcaataagcc cggtgtatag gtcagagtag tttacatcta
    16261 cgtggatcag agaaactttc gcattgtagg ggcgagccat agagactgct ttctctacca
    16321 gaactttgct ttccggggag agatcgaccg cgatgagaat gtgtttataa gccatagtgt
    16381 tactccttcc ataaagttgt cgatgactgg ccagctagcg tttcttgtgc cgttacgtca
    16441 cccgcgtcct gcgaactacg tgcgcggggc taacccagcc gtaaagattc agtgttaaga
    16501 ccatccttac cttatagcga cccggatgat ccgtcaatcc gccttgctta cccgttagat
    16561 aaacaaattt tcgacatgaa tatattgata gtggttaacc ttctggaaaa aaaacaacct
    16621 gatctcctac actatctata gagccgctcg gatgttggtc accacaaaag cggtttctcc
    16681 aggacctggt gttaactgat tggcagcgta tcgggagcgg tagccccggg gtggaactcc
    16741 gcgggcaggt cgccggggag gaggtatgat aagcaccgtc gcattatttt gggctttatg
    16801 tgtcgtttgc attgttaaca tggcgcgcta tttctcatca ctacgcgcgt tgttagtggt
    16861 actgcgtaac tgcgatccat tgctctatca atatgttgat ggagggggct tttttacctc
    16921 acatggccaa cccaacaaac aggtgcgtct cgtttggtat atctatgccc aacgttatcg
    16981 cgatcatcac gatgatgaat ttattcgccg ctgtgagcgg gtgcgtcggc agtttattct
    17041 gaccagcgca ttgtgtggtc tggtggtggt cagcctgatt gcattgatga tttggcatta
    17101 agcacttcag caataataac gcataaaaaa agcgggccag taaactgacc cgctcgtttt
    17161 ggtgtgtacg attacaggaa ctgcaaggag agccagtaca gtccgccgga aagcagtacc
    17221 gcagccggaa gggtaaacac ccaggccatc agaatactgg ttacggtttt acgctgtaag
    17281 ccgccgccat ctaccaccat cgtccccgcg acagaagagg agagtacgtg agtagtggaa
    17341 accggcatcc cggtataact cgccaggccg atagacactg ccgccgtcat ctgggcagac
    17401 atcccctgag cgtaggtcat gcctttctta ccgattttct caccgatagt cgttgccaca
    17461 cggcgccagc caatcatcgt accgatacct aacgccagcg cgaccgccat gatgatccac
    17521 accggtgcat actcgatggt gctaagcatg tcggacttca gtttcttcaa caggcgctga
    17581 tcgtcagcac tcacgccagg catcttcacc actttgtcga tagtgtcaga aacgcacagc
    17641 ataatgcggc gcatctggct acgttgatca agcgacagct tgtcgtagct ttccacatcg
    17701 gtggtcaaca tacctttcag gcggttgagc gcgttaatgg tattcgacgg atggcagtgg
    17761 aactccgcag gttgcgttgc gccagcttcc ggagccggta ctaactgatc agcaccggta
    17821 gcccgtttga gcagcgcagg atgctgctca aagtaagctt cgacgttgtt gatggcatca
    17881 cgggtacggg tgatttcgta gccagtggca ttcatgttca ccacgaagcc tgctggcgcg
    17941 acgccaatca ataccaacat aaccagacca atgcctttct gaccatcgtt cgcgccgtgc
    18001 gaaaacgcca cgccgatagc ggaaaggatc agcgcgatac gcgtccagaa cggcggcttt
    18061 ttcttgccgt ctttcttttc acgctccgct ggggtcaggt ggatacgggc gcgtttcttg
    18121 gtgccgctcc agtagcgacg cagcaagaaa atcagaccgc cagcaaacac caggccgaca
    18181 ataggggaaa cgatcagaga accgaaaata cttaatactt tcgggatatt gagtgcatcc
    18241 accactgacg tcccggtcat caacgcattg gttaaaccaa tcccgatgat cgcgccaatc
    18301 agcgtatgag agctggatgc aggtaaacca aagtaccagg tacccaggtt ccagataatc
    18361 gccgccagca acatagagaa caccatggca aggccatgag acgatcccat attaagcagc
    18421 agatccgtcg gcagcatatg cacaatggca taggcaacac tcagaccacc cagcaaaaca
    18481 cccaaaaagt tgaacaccgc cgccataacc acggcgagct gagaacgcat cgcgcgggta
    18541 tagataacgg ttgccacggc gttggctgtg tcatggaaac cattgatggc ttcgtagaac
    18601 agcacaaaag ccagtgcaag caataataac agcccggtat gcaaatccag gccagcaaac
    18661 aaatgtagca taggacgtta cgccattttg aggacatgaa cgcggcgcat tatcagtgac
    18721 tttcgcggcg cgggcaaagt gaaatataga ctttttttga tttgcctcct gtatggattt
    18781 cactcaaaaa ataattatct tatataattc aggcaaatac ttccttttag taatattgat
    18841 gctggtgcga ccactgagga atctttacaa ttcacgcccg ttttttctaa gaggagcgca
    18901 acgtggaaag gtttgatgcc attattatag gcgctggtgc ggcgggtatg ttctgttctg
    18961 cgctggcagg tcaggcagga cgccgggttc tgctgatcga taatggtaaa aaacctgggc
    19021 gcaaaatcct tatgtctggc ggtgggcgct gcaactttac caacctttat gtcgaaccag
    19081 gcgcttatct gagccagaat ccgcattttt gtaagtctgc actcgcacgt tttacccagt
    19141 gggatttcat tgatctggtc aataaacacg gcatcgcatg gcacgagaaa acgttagggc
    19201 aactcttctg cgatgactcc gcgcagcaga ttgtcgacat gctggtggat gagtgcgaga
    19261 agggcaatgt gaccttcaga ttgcgtagcg aagtgctgag tgtggtgaag gatgaaacag
    19321 gcttcacgct tgatctgaac ggcatgactg tcggttgcga aaagctggtc atcgcgaccg
    19381 gtgggctgtc aatgccgggg ctgggcgcat cgccgtttgg ttataagatt gccgaacaat
    19441 ttggcctcaa cgtgctgccg acccgcgcgg gtctggtgcc attcactctg cataaaccgt
    19501 tgctcgaaga gttacaggtg ctggcgggcg tggcggtgcc ttccgtgatt accgctgaaa
    19561 acggcaccgt tttccgtgag aacttactct tcacccaccg cggcttatct ggaccggcgg
    19621 tgttgcagat ttccagctac tggcaaccgg gtgaatttgt cagtatcaat ctgctaccgg
    19681 atgtggacct cgaaaccttc ctgaatgagc agcgtaacgc acatccgaat cagagcctga
    19741 aaaacacact ggcggttcat ctaccgaagc ggttggttga acgcttacag caactcgggc
    19801 aaatcccgga tgtttcgcta aaacagctca acgtgcgtga ccaacaggca ctgattagca
    19861 cattgaccga ctggcgcgta caacccaacg gcactgaagg ctatcgcact gccgaagtga
    19921 cgctcggcgg cgtggacacc aacgaactct cttcacggac gatggaagcg cgcaaagtgc
    19981 ctgggctgta cttcatcggc gaagtgatgg acgtcaccgg ctggctgggg ggctataact
    20041 tccagtgggc gtggtcgagt gcgtgggctt gtgcgcagga tttgattgca gcaaagtcgt
    20101 cctgacctat ttcctaaaga tgaaaattat tagagtcgca ttaaaaatga gctaattttg
    20161 atagtggtta tcttgtgatt attttctaat gagcccgtga actgaaaccc tccatgctta
    20221 atataaggtg gatggaaagg tgattgaaaa ctcacccagt ggccagatct ttataaaata
    20281 tgaacaggtt gaaaaaaaca gtaactttgc tgttttttat acttaaccac tatgcattaa
    20341 tgctgcgtta tttcatgatg cctaagaaaa accagcgtta cgcaaatggt caacgctggt
    20401 tttatccggt acgttgcaat tattttttag cagaacccgc ttctaatatt gaaacgattg
    20461 agaacaacgt aaagcatacc gctcccaaac cgaccagaac tcgcgaagga ataaaatatc
    20521 ccatgtcggt ctgcgccatt tccgcaagaa atgatgccag gaaaaggcaa aacaggcagg
    20581 tgaagacggg tatcatcggt attctgttgg ctaacgaaca ggtacgtctc cagaccagtg
    20641 ccagtagcca gacttttgag aatatgctgt aacagatcat tccgaggcaa ataagaataa
    20701 taccgggagc cagtcgggcg cttgcatcag aactgactaa cacgtatatg ccctgcagta
    20761 ccgtgattgt gccgagaaaa ataacccaat aacaccacag ccagtgctct ttggatgaga
    20821 acgtattacg tgtttgatgg acgattgt
//
LOCUS       DAJVTL010000076        20655 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.077, whole genome shotgun sequence.
ACCESSION   DAJVTL010000076 DAJVTL010000000
VERSION     DAJVTL010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20655
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.077"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(386..574)
                     /locus_tag="OQQ26_002646"
                     /pseudo
     CDS             complement(386..574)
                     /locus_tag="OQQ26_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708754.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(571..954)
                     /locus_tag="OQQ26_002647"
     CDS             complement(571..954)
                     /locus_tag="OQQ26_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858059.1"
                     /translation="MYAKSFLALDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQY
                     DTERPWFEHTDDGLTAHGQQCPYVRPERREVRLIQRLQQFVPDALPVVRKASWHCRQC
                     HHDYYEERYCTHCQTGRFSEEVVAG"
     gene            complement(1120..1689)
                     /locus_tag="OQQ26_002648"
     CDS             complement(1120..1689)
                     /locus_tag="OQQ26_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000221568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus Gp2 family protein"
                     /protein_id="HCS1858060.1"
                     /translation="MTHEYNPFWQQRIRETVLRALDVHPRLTALRVDLRLPDVPAATD
                     AAVISRFINALKARINAYQKRKRREGKRVHPTTLHYAWAREFGELKGKKHYHLLLLVN
                     RDTWCRAGDYRAPRSLAGMIKQAWCSALGVDAGPYATLAHFPDTSAVWLERDDDTGFQ
                     QVLERADYLAKEHTKAHATGERNFGCSRS"
     gene            complement(2433..2644)
                     /gene="hha"
                     /locus_tag="OQQ26_002649"
                     /pseudo
     CDS             complement(2433..2644)
                     /gene="hha"
                     /locus_tag="OQQ26_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000453334.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
     gene            3352..3558
                     /locus_tag="OQQ26_002650"
     CDS             3352..3558
                     /locus_tag="OQQ26_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HCS1858061.1"
                     /translation="MTTPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGAFPAPIKL
                     GRSSRWLKSEVEAWLQARIAQSRP"
     gene            3653..4255
                     /locus_tag="OQQ26_002651"
     CDS             3653..4255
                     /locus_tag="OQQ26_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858062.1"
                     /translation="MKQQYQTRYEWLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLT
                     PGWVSFNGEKPEIAIVPQSLHRLIYGPDKRATPPLDDDLIVNLCTSEHLLVHHPMLEG
                     ILLSECERLKHHSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNSLEDWTENLKRK
                     SEKELEEWIIDRQKQSAALTDLMDQYVLLAYRTTVDDNRN"
     gene            4892..5271
                     /locus_tag="OQQ26_002652"
                     /pseudo
     CDS             4892..5271
                     /locus_tag="OQQ26_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001750026.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            6843..7715
                     /locus_tag="OQQ26_002653"
     CDS             6843..7715
                     /locus_tag="OQQ26_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001767894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858063.1"
                     /translation="MVKVVEDERSRIRYLERRLNENGFYLPSSLADKDYFSYQKRILN
                     TLISQGADTLKINNFLAETDQRYFDSLPSEDDLNWYRNDARASLWLTCELYEMIKING
                     YENTLTCLSPESLPSHHSVRVDAIRRCIDNWPFILYTPSNYLNQKSIEWTTLLEKDDI
                     FREVKARNFDICSWLKKYIQEKTNISLNYVCGESSEEIMAWCYASYFTWKKNNQNSPD
                     SVELFTRKFKSAWATQKNRIKNRVDKKLRPLNVNISQEAYDKLRKLSINEGISNDRVI
                     ESALDMIYRSKIKK"
     gene            7814..8686
                     /locus_tag="OQQ26_002654"
     CDS             7814..8686
                     /locus_tag="OQQ26_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase family protein"
                     /protein_id="HCS1858064.1"
                     /translation="MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGK
                     SGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDA
                     EYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
                     HEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALP
                     DHAASPLMTRLQDELRTESVRAQAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDT
                     VVSVARAVWNWIFF"
     gene            9059..11905
                     /gene="ag43"
                     /locus_tag="OQQ26_002655"
     CDS             9059..11905
                     /gene="ag43"
                     /locus_tag="OQQ26_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Ag43"
                     /protein_id="HCS1858065.1"
                     /translation="MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAIALSLAA
                     VTSVPALAADTVVQAGETVSGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQ
                     WIQNGGIANNTTVTGGGLQRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE
                     GGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINK
                     NGRQIVAVEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQ
                     IVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVLGSNRLGNFTVE
                     NGKADGVVLESGGRLDVLEGHSAQKTRVDDGGTLAVSAGGKATDVTMTSGSALIADSG
                     ATVEGTNASGKFSIDGTSGQASGLLLENGGSFTVNAGGQASNTTVGHRGTLMLAAGGS
                     LSGRTQLSKGASMVLNGDVVSTGDIVNAGEIYFDNQTTPDAVLSRAVAKGDSPVTFHK
                     LTTSNLTGQGGTINMRVRLDGSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQ
                     GIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTS
                     MLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSY
                     GFVRLEGDLLRTEVAGMSLTTGVHGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL
                     THTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQL
                     QYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTK
                     HRVSELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLDLQAGLEARV
                     RENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF"
     gene            11976..12134
                     /locus_tag="OQQ26_002656"
     CDS             11976..12134
                     /locus_tag="OQQ26_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001550547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 family protein"
                     /protein_id="HCS1858066.1"
                     /translation="MPGCTSRLLPEGPFSREQAVAVKTAYRNVFTEDDQGTYSRLVIR
                     NAEGQLRW"
     gene            12289..13107
                     /locus_tag="OQQ26_002657"
     CDS             12289..13107
                     /locus_tag="OQQ26_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HCS1858067.1"
                     /translation="MRLASRFGYTNQIRRDRPLTHEELMHYVPGIFGEDRHTSRSKRY
                     AYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIIL
                     LNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
                     RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWS
                     AYQTIQENMLKGGISGRSARGKRIHTRAIHSIDTDIKLNRALWVMAETMLESLR"
     gene            13107..13280
                     /locus_tag="OQQ26_002658"
     CDS             13107..13280
                     /locus_tag="OQQ26_002658"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858068.1"
                     /translation="MQPVPEGVIQVPESPDAPEALPGCRSISDDDLCTWCTRLLYRSG
                     ELSLCRLSTGNGI"
     gene            13446..13919
                     /locus_tag="OQQ26_002659"
     CDS             13446..13919
                     /locus_tag="OQQ26_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HCS1858069.1"
                     /translation="MKTLSQNTTASACAPETGLQQLVATIVPDEQRISFWPQHFGLIP
                     QWVTLEPRVFGWMDRLCENYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGN
                     RAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID"
     gene            13935..14411
                     /locus_tag="OQQ26_002660"
     CDS             13935..14411
                     /locus_tag="OQQ26_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HCS1858070.1"
                     /translation="MQQLSFLPGEMTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAR
                     EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA
                     VVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL"
     gene            14474..14695
                     /locus_tag="OQQ26_002661"
     CDS             14474..14695
                     /locus_tag="OQQ26_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF987 domain-containing protein"
                     /protein_id="HCS1858071.1"
                     /translation="MKIITRGEAMRIHQQHPASRLFPFCTGKYRWHGSAEAYTGREVQ
                     DIPGVLAVFAERRKDSFGPYVRLMSVTLN"
     gene            14858..15235
                     /locus_tag="OQQ26_002662"
     CDS             14858..15235
                     /locus_tag="OQQ26_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system YeeU family
                     antitoxin"
                     /protein_id="HCS1858072.1"
                     /translation="MSDTLSGTTHPDDNDDHPWWGLPCTVTPCFGARLVQEGNRLHYL
                     ADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTITLYAKGLTCEAD
                     TLGSCGYAYLAVYPTPAEPAITV"
     gene            15282..15659
                     /locus_tag="OQQ26_002663"
     CDS             15282..15659
                     /locus_tag="OQQ26_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin"
                     /protein_id="HCS1858073.1"
                     /translation="MNTLPDTHVREASGCPSPVTIWQTLLTRLLDQHYGLTLNDTPFA
                     DERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSAGAPSQLINSIDILRARRATG
                     LMTRNNYRMVNNITQGKHPEAKR"
     gene            15656..16144
                     /locus_tag="OQQ26_002664"
     CDS             15656..16144
                     /locus_tag="OQQ26_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858074.1"
                     /translation="MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYS
                     LRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDNAWLYSLSHQTNDDGETEWIHFT
                     GSGYLLRTDAWSYPVLRLKRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGLPTF
                     DW"
     gene            16164..16361
                     /locus_tag="OQQ26_002665"
     CDS             16164..16361
                     /locus_tag="OQQ26_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF957 domain-containing protein"
                     /protein_id="HCS1858075.1"
                     /translation="MKLLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPC
                     IEQAWEDIRTLRQLQLPDQNR"
     gene            16446..17291
                     /locus_tag="OQQ26_002666"
     CDS             16446..17291
                     /locus_tag="OQQ26_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
                     /protein_id="HCS1858076.1"
                     /translation="MSAITVSRPEVVNGHTDVICSTSVSHILAVRKTTLLQIDTLIRQ
                     LAEISSMTESIGGKTSLDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRS
                     GMLSLMDAQARDTWYRSLEYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLS
                     WNYKTNSPCKFGSKIIVNNLVRGDRWGLHLITGQQADRLADLERMLYLFSGKPIPDNR
                     ENIIIRLDDHIRSVQGKACYEDEMFNIRYFKKGSAHITFRKPELVDRLNDIIARHYSE
                     MLPSL"
     gene            17556..17702
                     /locus_tag="OQQ26_002667"
     CDS             17556..17702
                     /locus_tag="OQQ26_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858077.1"
                     /translation="MDDERLKNPPVGSSVLERIRDIRASMRRVYLQVICSPADSQPTV
                     SSLR"
     gene            18084..19268
                     /locus_tag="OQQ26_002668"
     CDS             18084..19268
                     /locus_tag="OQQ26_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter"
                     /protein_id="HCS1858078.1"
                     /translation="MQKTATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADE
                     LKARPIMVGFFFTGSAIMGILVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNR
                     NYFILLSTGVLLSSFASTANPQMFALAREHADRTGRETVMFSTFLRAQISLAWVIGPP
                     LAYELAMGFSFKVMYLTATIAFVVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRD
                     TRLLFVVCSMMWAANNLYMINMPLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYY
                     MKRIGKRLLMLIAIVSGMCFYASVLMATTPAVELELQILNAIFLGILCGIGMLYFQDL
                     MPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYHALFWLAIGMLGIAMICLLFIK
                     DI"
     gene            19379..20302
                     /locus_tag="OQQ26_002669"
     CDS             19379..20302
                     /locus_tag="OQQ26_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1858079.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
                     IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALF
                     WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
                     LGTLLILSSVILISMDSRRRARKINRPARHE"
     gene            complement(20306..>20655)
                     /locus_tag="OQQ26_002670"
     CDS             complement(20306..>20655)
                     /locus_tag="OQQ26_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipoprotein NlpA"
                     /protein_id="HCS1858080.1"
                     /translation="LKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAI
                     ISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKA
                     AETIFNGGAVLGW"
BASE COUNT         5127 a         5285 c         5181 g         5062 t
ORIGIN      
        1 tgctacgggg atttattgca gagcggtatg tacgaggtct gtttacagct accagccaga
       61 cttgtttgag gactgcggag gcgcgagtac ttaatccaaa atcgccgctc tgcgcagggc
      121 gttcagaggt atcgcaacct gcattttatc cggtgtttcg cacctgcccc gttcgtgaca
      181 caacggcgcg acaccggata tccgcagtcc tgcttacctg aataaaaccc ggggtattga
      241 ttggtagtgt ggtgcggaat cgtactgtga tctcgcattc gccgaattcg cactgtggtg
      301 tcaatcaacc atacgtgaga gtcctctccg tatttatcag tgcctcagga cgatttctgc
      361 atagttaatc caggggctgc aaggccgcct tctgttgcgc actcagggca tgtaaatcat
      421 gctcaaacca cgccccttga gcatctgtct gcaaaatcaa ccggccacga caggaaaggc
      481 agaaacaatg ccggatattt ctgctgagcg cagagttggc actgataatg tgctcacccg
      541 gcgtgatccc cagccccatt tttatgccgt tcatcctgct accacctcct cactgaagcg
      601 cccggtctgg cagtgtgtgc agtaccgctc ctcataataa tcgtggtgac attgtctgca
      661 gtgccagctg gctttacgca ccacgggtaa ggcatccggt acgaattgct gcagacgctg
      721 aatcaagcgt acctccctgc gttccggtct gacataagga cactgctgac cgtgcgctgt
      781 cagcccgtcg tcagtgtgtt caaaccaggg acgttcagtg tcgtattgcg ggtggtatct
      841 gagtgcactg ccgcaaaggt ggcaggtgta gcgatcataa ggtgcagtct gtgcggtacg
      901 ggcaccggtc agacgtccgt tgccatcaag tgcgagaaaa gattttgcgt acatagtata
      961 tgttccttag cgccagacga cacgcaggca acagccgtcc cggtacgggc agcctggtct
     1021 ggtgtgaatg gcggtttcag tccggtctca gaagggaaaa tcagtgtggt ggccgtgagc
     1081 gcgtcatcac actgaggtca gataactcgt ctgtcgggct cagctacgac tgcagccaaa
     1141 gttgcgctca ccagtggcgt gagctttggt atgttccttc gccagatagt cagcacgttc
     1201 cagcacctgc tgaaagccag tgtcatcatc gcgttccagc cacaccgccg acgtgtcagg
     1261 aaaatgcgcc aacgtggcat aaggcccggc atccaccccc agggcactgc accaggcctg
     1321 tttaatcatc ccggccagtg atctcggagc gcggtaatcg ccggcacgac accaggtatc
     1381 ccggttgacc agcagcagga ggtgatagtg ttttttgcct ttaagctccc cgaattcccg
     1441 ggcccaggcg taatgcaggg tcgtgggatg tacgcgttta ccttcacggc gcttacgctt
     1501 ctggtaagcg ttgattcggg ctttcagggc attgatgaag cgggatatca cagctgcgtc
     1561 cgttgctgcc ggtacatccg ggagacgcag gtcaacccgc aatgccgtca ggcggggatg
     1621 aacatccagt gcgcgcagca ccgtctcacg gatacgttgt tgccagaagg ggttgtactc
     1681 gtgtgtcatg gttaaatctc cgtatggttt cgttcatacg gaataaccac gctgtaaaaa
     1741 atgtgcagag tccctgaagt gatctccaac cgggcaatgt ctcaggcact cagtgatacc
     1801 ccgactgtcg tctccggact gacggttgaa ttttcagcgt tgttttttta atgcaaaaaa
     1861 ccggttacgg ataaaactgt gaggagggcg ttatggtgat acgcaaaacg gtgtgcaggg
     1921 attgtagtaa cgcaattact cataatacgg aatgctgccc gagctgcgcg tcaacagctt
     1981 cctcaggcta ttaccgaaat accgatcgtc tgctctttct actgacgtta ctgcctgtgc
     2041 tgattctggc tgtcgtttca gacgtcagtg tatttgtact gttgcagtag gttacagggg
     2101 agggattatc cggaatcaac ggggcagaac gccccgccgc ctctgcgttt gctgtgccag
     2161 acagtaacgc accggatccc cggtaaatac gagaaaacct cagcagatac aggccgttaa
     2221 tacccgaaaa tcagcccatg atcacccaca cctccggaca ccattccctt ttgatttcga
     2281 attctttgtt gtcgttatac agcttaacgt tcccgacatt atcctggttc ccgacaacag
     2341 gaacatattc agcttttaat aacctgagaa gagccaataa gaatcacaaa gcggataaca
     2401 cctggcgcga tgccgttgtg attaccgaac gctcagatga catatttcca gactgaagcg
     2461 ggaacacgat cgtaaagctt gttcattgtc agttctgcca gtcggtgatc gaccgcagag
     2521 ttgaaggttt ccagctccgc aggggtaagt ttataacgcg tgtgggaaat cacttttcca
     2581 gtgtctcccg ggatgaacaa cgacggaact gatacagcca gtcctctttg gttttaactt
     2641 ccattagcct ctcatcactt tatgctacaa ttaacgtgat actgtcagca taccgcacca
     2701 gactggcatt ctggtaccct ccccaaactc attactcccg ggccaccact taaccggtct
     2761 ctcagactgt cactcaccag gtcggatacg cttaccgctc agacggatgc ttaatgcact
     2821 ctgttcacgt gggttgcagg tacgttttat atacgcaggt tatacgccag ctatcagaga
     2881 tagccctgtg ggtacaacgc aatctgctgc tactgcgttc tcatgcccac tgatcgcact
     2941 cacagtgttt atttcacata tatgaactca tgtgtttgat ctctcttata tatttataat
     3001 accaatcaga cagtcttatc ccaacagtga tacctgtccc tgcccacaag gcacgggctg
     3061 ccccaccgta accgccccgt aaataactct gcaattatca gaacgccagt tttcccctct
     3121 tcctcacgaa aatcatccct tctttatcgc gcgcgcgtgc ggaagcatcg tttcgtaaca
     3181 accacccggc ataccggtac ggctcagcca ccgcaacctc cccgtttatc tcctggcggt
     3241 cacattcccg attatttttt acgtttctcc ccggttgtta tgccggtgaa ggtggtgcgt
     3301 tgttttcatg accacaccgg ctggtttaac aacatccgga ggaacattct catgaccacc
     3361 ccagtttcgc tgatggatga ccagatggtc gatatggcgt ttatcactca gctgaccggc
     3421 ctgaccgata agtggtttta caagctcatc aaggatgggg cctttccggc tcccatcaaa
     3481 ctcggccgca gctcccgctg gctgaaaagt gaagtggaag cctggctaca ggcgcgtatt
     3541 gcacagtccc gtccgtaatt tctgcccctt atccgttcac ccgcagcaga cgtaatcccc
     3601 ggcctgccga cggcattctg ctgcctgtta tatccccgtg aggaatatga aaatgaaaca
     3661 acagtatcag acccgctacg aatggctcca cgaaagctac cagaaatggc tgaccggctt
     3721 cacccggcac gccgtatcct ggggcgtgtg tcatccgaat atctactact tccataatct
     3781 gacgcccggt tgggtgtcat tcaatggtga aaaaccggag attgccatcg tcccccagag
     3841 cctgcaccgg ctgatttatg gccctgacaa acgggccacg ccgcccctgg atgatgatct
     3901 gatagtgaat ttatgcacca gtgaacatct gctggttcat catccgatgc tggaaggcat
     3961 tctgctgtct gaatgtgaac gtctgaaaca ccattctctg gcaaataaac tgatcagtct
     4021 cttccgtcag tttggtggca cggagttacg ccttaaactg gtctggcttt gctggcttga
     4081 tttaatgacc ggaaacagcc ttgaagactg gacagagaac ctgaaacgga aatcagaaaa
     4141 agagctggag gaatggatca tcgaccgtca gaagcagagc gcagcactga cggatctgat
     4201 ggatcagtac gtgctcctgg cataccgcac aacggttgac gataaccgta actgatgccg
     4261 gttgcttccg gaaggtgcgg caaaatacgg gaatgatgct tccggcccca catactcacc
     4321 tgcagagcgt gttcgtcgtc atcatactga gccatgacgg atggcttaag ggcatcctgt
     4381 cattgctgaa ctggcatgaa caccaccagt gaatgaaagc catggacagg gatgttcttt
     4441 acagccagat acacgccacg ttctctacgg actgaatatg caggcagagg ttatttacca
     4501 gaaatggcat gctgcggtac atgcctcatc ctggtgacaa taagtacatg gcgacagcgc
     4561 tccttgcact gcggaagaaa ctcacacggc aggatgttat ggctgaagtc cccggagatc
     4621 attgtttctt cgtcagatat tcaggaacag ttgtagtaac gaattttacc ggtctctgca
     4681 catggcccgg ctccgtctgt gtggcacagg ttacgggtat tgccggttgt aggaacggac
     4741 ggtgagttga gtgatctgtg gaatcaggga gcattctggg cattatggtg ctgaaatgtg
     4801 accatcgaca caatacccct gcttcgtggt acacaataac caggaaacat accctgaacc
     4861 gacagccata aggacccgtc acaaaatggt gctaatgaaa gcgaaacagg aaaaccggct
     4921 tgagcgacag ctccaataac tctgttacgc acgcgtactg atccttgatg aaacaggcta
     4981 tctgccaatg ccccggaaag aagccaggct gttcttccgg ttgctgaagc ggcaatatga
     5041 aaaagcgaga atcgttctga cgtcaaataa aggattcgcc aactgggggg aaatgctcgg
     5101 cgataatgta ctggcaacag tgatccctga gcatctgctg catcactcaa ccacgctgaa
     5161 tattaagggg ggaaagctac cacctgaagg aaaaacgtaa agcaggtgta ctggcaaggg
     5221 ccagcgccaa taagtgatga tgaatcggtg gaaaccgggc atcgccattg ataaatagcg
     5281 gcaatcaaat aaaacggtga aaaaaggtta tatacagcgg cgttgacaat acaggaggta
     5341 atactcacca ataaataagc gtcaatacgg tgctccgttg acgcttacca ttgctcattc
     5401 agttgagcaa taaattgtcc cggataatcc agtccttcac attgtctgct accagatgaa
     5461 acttgcgccc ctatccgggg ctgtcactcc atgcagccag actttatgtt tcccttcacc
     5521 agaatacccc cagagtgata atgtcgataa ccagatgtgg aatttcgcag agagctggct
     5581 tctgatgctg acgctaacgt gcttttccca cccgctaacc agaaagtaat ctgctcagca
     5641 tatcagtaac cccatcagct taaaatcaaa tcaataaagc cctgtaaaac ctgaagtaac
     5701 agtccgggaa ctcgtatcat gctaacatat cagtgttgtg aagcagtcga caacgagctt
     5761 cagacggtac acacgtcaat tcatgcagaa atagcagcca catcaggtct ggctgtcagc
     5821 ggaccacgca gcctgagtac attgttgtaa attaaacgac tgatgggttt taaatttttt
     5881 ctttgccacc accgtgaact gataccggaa aaacagtagt ctcaggaaga gtgatctgaa
     5941 agtcagcttt attaaaaaag ctattagacc gggtaaataa tgtcaacgga tgaaatgtta
     6001 tgataattct ggatgccata tctatcagta aatcagtaac gccagagggt atggtaatat
     6061 ctaagaaata ctttacggta atcaggaata tttacttgcc atcatggctt atgaaattca
     6121 tggttcatga gtcactgtaa ctcccgtatc gtccgtcaat tatagtttac gttaacgata
     6181 tatctgtgtc tgcaggcact acaatgaatt cccgaataaa tttccgacca gtcattttct
     6241 ctgacaagga agcccatatg atttccctgt acccgtgaca gactggtgaa caataccata
     6301 tctgtaagat atgattaatg aggaaagtga tgaccgttag tcattttatc tccagtaacg
     6361 taaaaccaga cttatcgtaa ataaaaatat gaagccctct gttaaagtca tggagagacg
     6421 catcaaaata caggatacaa tgattctcac aatgaaactc atcgtctctg gtgaaattca
     6481 tatcaacatt taccttaata acctgacgcg ggattaactg tgttgtttaa ggcaaagggg
     6541 agagttgccc gaaggcgaaa acgaaagtaa attaataata acaggatgag aggagaaagc
     6601 gctcttcccg gaaaataaaa agagcggttc actcctgtga atgcacttca accgtcctgg
     6661 caaagaatgt acttttataa aaccccctcc cagtcagcag atacaaaaag ataacatgag
     6721 gtatctcccg ccccttaatt tatacacgtg aaatgaactg aaatttatga gaaaatcatg
     6781 ctaaagatgc tttgatttta cttaaaatca cgtgtgatta tcctgactga aggagagata
     6841 ctatggttaa ggttgtggaa gatgaaagaa gcagaatacg atatcttgaa aggcgcttaa
     6901 atgaaaatgg gttttattta ccatcaagcc tggccgataa agattatttc tcgtatcaga
     6961 aacggatttt aaacactctt atttcacagg gtgctgacac actgaaaata aataattttc
     7021 tggctgaaac agaccagcgt tacttcgatt ccttaccatc tgaggatgat cttaactggt
     7081 atcgtaatga tgcccgcgcc agtttatggt tgacttgtga attatatgaa atgattaaga
     7141 taaacggtta tgaaaatacc cttacctgtt tatctccgga gtcactgcct tctcaccaca
     7201 gcgtgagggt ggatgccata cgcaggtgta ttgacaactg gcctttcatt ttatacacac
     7261 catcaaatta cctgaaccag aaaagtattg aatggaccac actactcgaa aaagatgata
     7321 ttttcagaga ggttaaggcc agaaattttg atatctgctc atggctcaaa aaatatattc
     7381 aggaaaagac gaacatttcc ctgaactatg tctgtggaga atcatctgaa gagattatgg
     7441 cctggtgtta tgccagttac ttcacatgga aaaaaaacaa ccagaattca ccagactcag
     7501 tagaactgtt tacccggaag tttaaaagcg cctgggctac ccaaaaaaac agaataaaaa
     7561 atagggttga taaaaagctg cgccccctga acgtaaatat ttcacaggag gcatatgaca
     7621 aactgagaaa attatccata aacgagggta tctcaaatga ccgggttatt gaaagtgctc
     7681 tggacatgat ttaccgtagc aaaattaaaa aataaaacca ttcaaaataa tttcagacag
     7741 atattatctc cgtgagtccc ccgccacctt tccggtgtgc ggggttttgt cttttttcac
     7801 cgggaataca tgtatgaatc cgtctgatgc cattgaggca attgaaaaac ccctctcctc
     7861 tctgccttac tcactttccc gtcacatcct ggaacatctg cgcaaactca ccagtcacga
     7921 acccgtgatt ggcattatgg gtaaaagcgg ggccggtaaa tcctcactct gtaatgcact
     7981 gtttcagggg gaggtcaccc cggtcagtga tgttcacgcc ggcacccggg aagtgcggcg
     8041 cttccgtctg agtggacatg gtcacagcat ggttatcact gacctgcccg gggtgggcga
     8101 gagccgggac agggatgcag agtatgaagc cctgtaccgt gacattctgc ctgaacttga
     8161 cctggtactg tggctgatta aagccgatga ccgtgccctg tctgtggatg agtatttctg
     8221 gcgacacatc ctgcaccggg gacatcagca ggtgctgttt gtggtgacgc aggccgacaa
     8281 aacggagccc tgccatgaat gggatatggc cggcattcag ccttctcccg cacaggcaca
     8341 gaacattcgg gagaaaacgg aggcggtatt ccgtctgttc cggcccgtac atccggttgt
     8401 tgccgtatcg gcccgcaccg gctgggaact ggatacgctg gtcagtgcgc taatgacagc
     8461 acttcccgac catgccgcca gtcccctgat gacccgcctg caggacgagc tgcgcacgga
     8521 atctgtccgc gctcaggccc gtgaacagtt taccggtgcg gtggaccgga tatttgacac
     8581 ggcggagagc gtctgtgttg cctctgttgc ccgtacggtt ctgcgtgccg tccgtgacac
     8641 ggtggtctct gttgcccgcg ctgtatggaa ctggattttc ttctgaacac tctgccaggg
     8701 gaaatgcctg attacattgc gttaaccaac tgaaaacatg atacaaacac tccatccccc
     8761 tcctgtttct cttgcgtgac tgccctgctg ttaatagaat aaaacgatcg ataaaacagg
     8821 tatcgatcgt tgctatcgat cgtttatagt ggttaatggc ctgcgaaaag gcagctgaat
     8881 ctcttcatca tgcagaacgg aattgcacac aacggactga tacttctctg gcggatgaga
     8941 gaggggaagc atttatgtcc gggaaaaacc actttatctg accatgctgt tttgtacctg
     9001 ccggtatcca catttgtggg taccggcttt tttattcacc ctctgtaagg aaaagctgat
     9061 gaaacgacat ctgaacacca gctacaggct ggtatggaat cacattacgg gcaccctggt
     9121 ggtggcttcc gaactggcgc gctcacgggg aaaacgcacc ggtgtggcga ttgcgctgtc
     9181 tcttgctgct gtcacatcag ttccggcact ggctgctgac acggttgtac aggcgggaga
     9241 aaccgtgagc ggcggaacac tgacaaatca tgacaaccag attgttctcg gtacggccaa
     9301 cggaatgacc atcagtaccg gtctggagta tgggccggat aacgaggcca ataccggcgg
     9361 gcaatggata caaaatggcg gtatcgccaa caacactact gtcaccggtg gtggtcttca
     9421 gagagtgaat gccggaggaa gcgtttcaga cacggttatc agtgccggag gcggacagag
     9481 ccttcagggg caggcagtga ataccactct gaacggcggt gagcagtggg tacatgaagg
     9541 cgggattgca acgggtaccg tcattaatga gaagggctgg caggccgtca aatccggcgc
     9601 aatggcaacc gacacggttg tgaataccgg cgcggaaggg ggaccagatg cagaaaatgg
     9661 tgataccggg cagtttgttc gcggaaatgc cgtacgtacc accatcaata aaaatggtcg
     9721 tcagattgtg gctgttgaag gaacagcaaa taccactgtg gtttatgccg gcggcgacca
     9781 gacggtacac gggcatgcgc tggataccac actgaatggc ggttaccagt atgtgcacaa
     9841 cggaggcaca gcctctgaca cggttgtaaa cagtgacggc tggcagattg tcaaggaagg
     9901 tggtctggcg gatttcacca ccgttaacca gaaaggcaaa ctgcaggtga acgccggtgg
     9961 tacagccacg aatgtcaccc tgaaacaggg tggagcactg gtcaccagta ctgcggcaac
    10021 ggttcttggc agcaaccgtc tgggcaattt cacggtggaa aacggtaagg ctgacggcgt
    10081 tgttctggag tccggcggtc gcctggatgt actggaaggc cattcagcgc agaaaacacg
    10141 ggtggatgac ggcggaaccc tggcagtgtc tgccggtggt aaggcaacag atgtcaccat
    10201 gacatccggt agtgccctga ttgcagacag tggtgccact gttgagggga ccaatgccag
    10261 cggtaagttc agtattgatg gcacatccgg tcaggccagc ggactgctgc tggaaaatgg
    10321 cggcagcttt acggttaatg ccgggggaca ggccagcaac accactgtcg gacatcgtgg
    10381 aacactgatg ctggctgccg ggggaagtct gagtggcaga acacagctca gtaaaggcgc
    10441 cagcatggta ctgaatggtg atgtggtcag taccggcgat attgttaacg caggggagat
    10501 ttactttgac aatcagacaa caccggatgc cgtactgagc cgtgctgttg caaaaggcga
    10561 ctccccggta acgttccata aactgaccac cagtaacctc accggtcagg gtggcaccat
    10621 caatatgcgt gttcgccttg atggcagcaa tgcctctgac cagctggtga ttaatggtgg
    10681 tcaggcaacc ggcaaaacct ggcttgcgtt tacaaatgtc ggaaacagca acctcggggt
    10741 ggcaacctcc ggacagggta tccgggttgt ggatgcacag aatggcgcca ccacagaaga
    10801 aggtgcgttt gccctgagtc gcccgcttca ggccggcgcc tttaactaca ccctgaaccg
    10861 tgacagcgat gaagactggt acctgcgcag tgaaaatgct tatcgtgctg aagtccccct
    10921 gtatacatcc atgctgacac aggcaatgga ctatgaccgg attctggcag gctcccgcag
    10981 ccatcagacc ggtgtaaacg gtgaaaataa cagcgtccgt ctcagcattc agggcggtca
    11041 tctcggtcac gataacaacg gcggtattgc ccgtggagcc acgccggaaa gcagcggcag
    11101 ctatggcttc gtccgtctgg agggtgacct gctcagaaca gaggttgccg gtatgtctct
    11161 gacgacaggg gtgcatggtg ccgcaggcca ttcttccgtt gatgttaagg atgatgacgg
    11221 ttcccgcgcc ggcacggtcc gggatgatgc cggcagcctg ggcggatacc tgaatctgac
    11281 acacacgtcc tccggcctgt gggctgacat tgtggcacag ggaacccgcc acagcatgaa
    11341 agcgtcatcg gacaataacg acttccgcgc ccgcggctgg ggctggctgg gctcactgga
    11401 aaccggtctg cccttcagta tcactgacaa cctgatgctg gagccacaac tgcagtatac
    11461 ctggcaggga ctttccctgg atgacggcca ggataacgcc ggttatgtga agttcgggca
    11521 tggcagtgca caacatgtgc gtgccggctt ccgtctgggc agccacaacg atatgacctt
    11581 tggcgaaggc acctcatccc gtgacactct gcgcgacagt acaaaacacc gtgtgagtga
    11641 actgccggtg aactggtggg tacagccttc tgttatccgc actttcagct cccggggtga
    11701 catgagcatg ggtacagccg ccgccggcag taacatgacg ttctcaccgt cccggaatgg
    11761 cacgtcactg gacctgcagg ccggactgga agcccgtgtc cgggaaaata tcaccctggg
    11821 cgttcaggcc ggttatgccc acagcgtcag cggcagcagc gctgaaggtt ataacggtca
    11881 ggccacgctg aatgtgactt tctgataatc aggtcactct ccttcaggcc ccggtcatca
    11941 tgaccggggc tttttacttt cagggagcaa cagatatgcc gggttgtaca tcacgtttat
    12001 tgcccgaagg ccctttctca cgcgaacagg ctgttgccgt caaaacagct taccgcaatg
    12061 tgtttactga agatgaccag ggaacatatt cccggctggt tatccgtaat gctgaaggtc
    12121 agttgcgctg gtgatgccgg aacacagctt aatactcagc tcgccagtta agggcttctc
    12181 agacaataaa cgtcattcat ttcatctgtc aggccgcgtc ttctccggga gacgtggctt
    12241 tttcatttat tacaccagta aatcttaacc accgataagg agcaaattat gcgactagcc
    12301 agtcgttttg gttatacgaa ccagatacgc cgtgaccgtc cgctgacaca cgaagaactg
    12361 atgcactatg ttcccggtat tttcggtgaa gaccggcata cttcccgcag taaacgatat
    12421 gcgtacattc ccaccatcac cgtactggaa agcctgcagc gggaaggctt tcagccattc
    12481 ttcgcctgcc agacccgtgt gcgcgacccg ggccgccggg gatacacaaa acatatgctg
    12541 cgtctgcggc gggccggaga gataaacgga gaacatgtcc ctgaaatcat tctgctcaac
    12601 tcccatgacg gtacctccag ctaccagatg ctgccgggtt acttcaggtt cgtctgtcag
    12661 aacggatgcg tctgtggtca gtctctgggg gaagtgcgtg ttccgcatcg gggaaatgtg
    12721 gtggacagag tcattgaagg ggcttacgag gtggtgggcg tttttgaccg gattgaggaa
    12781 aagcgtgatg ccatgcagtc gctggtcctg ccgccaccgg cacgccaggc gctggcacag
    12841 gcggcgctga cttaccgtta tggtgacgaa catcagcccg tcaccaccgc cgacattctg
    12901 acgccacgac gccgggagga ttacggtaag gacctgtgga gcgcatatca gaccatccag
    12961 gagaatatgc tgaaaggcgg gatttccggt cgcagtgcca gaggaaaacg tatccatacc
    13021 cgggccattc acagcattga taccgacatt aagctcaatc gcgcattgtg ggtgatggca
    13081 gaaacgatgc tggagagcct gcgctgatgc agcctgtccc tgaaggcgtg attcaggtac
    13141 cagaatcacc cgacgccccg gaggcgctgc cggggtgtcg ttccatttct gatgatgacc
    13201 tgtgcacctg gtgtacccgc ctgctttacc gttccggaga gctcagcctg tgcagactga
    13261 gtacaggcaa tggcatctga ccatccgtct gtgaccggaa cggttacgcg tacagctgtc
    13321 cggaatttca gccgaatatc attcatccct gatattaccg ggtctcacgg tcagtgatga
    13381 acgtgatgtt gccagctccc gacctttact ccctctcatt tattcacatt acaaggattt
    13441 catacatgaa aacattgtct cagaacacca ccgcttcggc ctgtgcaccg gagactggcc
    13501 tgcaacaact ggttgccacc attgtccctg atgaacagcg catcagcttc tggccgcagc
    13561 attttggcct cattccacag tgggtcaccc tggaaccccg tgtcttcggc tggatggacc
    13621 gtctttgcga aaactactgc ggtggtatct ggaatctgta caccctgaac aacggcgggg
    13681 catttatggc acccgaaccg gatgacgatg atgacgaaac atgggtactg ttcaatgcca
    13741 tgaacggtaa ccgcgctgaa atgagcccgg aagccgccgg cattgctgcc tgtctgatga
    13801 cgtacagtca tcatgcctgt cgtacggagt gttatgccat gacggtccat tattaccggc
    13861 tgcgggatta cgccctgcag catccggaat gcagcgccat tatgcgcatc atcgactgaa
    13921 tggagagaag cacaatgcaa cagctttcct ttctgcccgg agagatgacg cccggcgagc
    13981 gcagcctcat tcaacgggcc ctgaaaaccc tggaccgcca tcttcatgaa cccggcgtgg
    14041 ccttcacctc cacccgtgcg gcacgggaat ggctgattct gaacatggcg ggactggagc
    14101 gtgaagagtt ccgggtgctg tatctgaaca accagaatca gctgattgcc ggtgaaaccc
    14161 tcttcaccgg caccatcaac cgcacggaag tccatccccg ggaagtgatt aaacgcgccc
    14221 tgtatcacaa tgccgctgct gtggtgctgg cacacaatca cccgtccggt gaagtcacac
    14281 ccagtaaggc agaccggctt atcaccgaac gtctggtaca ggctctgggc ctggtggata
    14341 tccgggtgcc ggaccatctg atagtcggtg gcaaccaggt tttctccttt gccgaacatg
    14401 gtctgcttta acccgtcaca accacatcac acctgttttc acttttatct tctgtcttca
    14461 gaggtatccc attatgaaaa tcatcacccg tggtgaagcc atgcgtattc accaacagca
    14521 tcctgcatcc cgtctttttc cgttctgtac cggcaaatac cgctggcacg gcagtgctga
    14581 agcgtatacc ggtcgtgaag tgcaggatat tcccggtgtg ctggccgtgt ttgcagaacg
    14641 ccgtaaggac agttttggtc cgtatgtccg gctgatgagc gtcaccctga actgatgttc
    14701 cgtcacccgg aaaacgagta cgactggctg agctcagacg ccgctgtgga tgaggtcctg
    14761 ctcatcaacg aatacacctt taccgaagcc ggtctgcgcg ccggctgacc cgtcatcgtt
    14821 aaactatcat tcaccgattt tctgtgagga ttttatcgtg tcagacacac tttccgggac
    14881 aacgcatccc gatgacaatg acgaccatcc ctggtgggga ctaccctgca cagtgacgcc
    14941 ctgtttcggc gcccgtctgg tgcaggaggg taaccggttg cattaccttg ccgaccgtgc
    15001 cggtatcaga ggccggttca gcgacgcgga tgcataccac ctggaccagg cctttccgct
    15061 gctgatgaaa caactggaac tcatgctcac cagcggtgaa ctgaatcccc gccatcagca
    15121 taccatcaca ctgtatgcga aggggctgac ctgcgaagcc gatacccttg gcagttgtgg
    15181 ttacgcttat ctggctgttt atccgacacc ggcagagccc gcaatcaccg tataaccccg
    15241 gatatctccc ctttatcacc acctgttaca gagaacttaa gatgaataca ttacccgaca
    15301 ctcacgtacg ggaggcatcg ggctgcccgt ctcccgtcac catctggcag acactgctca
    15361 cccgactgct ggaccagcac tatggcctca cgctgaatga cacaccgttc gctgatgaac
    15421 gtgtgattga gcagcatatt gaggcaggga tttcactgtg tgacgcggtg aactttctcg
    15481 ttgaaaaata cgcgctggta cgtaccgacc agccgggatt cagcgcagga gccccatcgc
    15541 agttaatcaa cagcattgat attctccggg ctcgcagggc gaccggcctg atgacccgga
    15601 acaattacag aatggtaaat aacattaccc agggcaagca tccggaggca aaacgatgaa
    15661 actggccctg acgctggaag ccgacagcgt taacgtgcag gcactgaaca tggggcgcat
    15721 tgtcgttgac gtcgatggtg ttaatctcag tgaactgatt aacaaggtct ctgaaaacgg
    15781 ttattcactc cgcgtggtcg ataaatccga ccaacacgca accagtacac caccaccgtt
    15841 aacaaccctt acctgcatac gttgcagcac cgcacatatc acggaaacgg acaacgcctg
    15901 gctgtactcg ctgtcacacc agactaatga cgacggcgaa acagaatgga ttcattttac
    15961 aggcagcggc tatctgttac gtaccgatgc atggtcgtac ccggttctgc ggcttaaacg
    16021 cctgggcctg tccagaacgt tccgtcgtct ggtcgtcact ctcacccggc gttatggcgt
    16081 cagtctcatt catctggacg ccggcgcaga atgtctgccg gggctcccca ctttcgactg
    16141 gtaatcagga caaaagacac tggatgaaat tattaaccac agaaacggcg ctggatattc
    16201 tgattgcgtg gctgcaggac aatattgact gcgaatcagg gattatcttc gacaacgatg
    16261 aggataaaac ggattcggca gcactgctgc cctgtattga acaggcctgg gaagatatcc
    16321 gtaccctgcg ccagttgcag cttccagacc agaaccggtg agtctcattc accatacttc
    16381 attccactga cgccagcctg aacagggctg gcgttttcat ttatctgcga aaaggaatat
    16441 cgattatgtc tgcaatcaca gtctcccgtc cggaagtggt caacgggcat acggacgtta
    16501 tctgctccac ctcagtcagc cacattctgg ctgtgcgaaa gactacactg ctgcaaatcg
    16561 acacacttat ccggcaactg gctgaaatct catcaatgac agaaagtatt ggaggtaaaa
    16621 cttctctgga ctgggccatg aaacaggatt ttcgctgtgg ctgctggctc atggagaaac
    16681 cggaaaccgc aatgaaagcc atcacccgca atcttgaccg cgaaatctgg cgtgacctga
    16741 tgcaacgttc cgggatgctg tcattaatgg atgcgcaggc ccgtgataca tggtaccgct
    16801 cactggagta cgataacttt ccggaaatca gtgaagcgaa catttggagc acatttgagc
    16861 aactgcacca gaataaggat gaagtgtttg agcgaggagt gatcaacgtc ttcagagggc
    16921 tgagctggaa ttacaaaacc aactccccct gtaaatttgg cagtaaaatt atcgtcaaca
    16981 atctggtgag gggggaccgg tggggattgc atcttatcac cgggcaacag gcagatcgac
    17041 tcgccgacct ggaaagaatg ctgtatctgt tcagtggcaa accaatccct gacaaccggg
    17101 aaaatatcat cattcggctg gatgatcaca tccgctccgt tcagggcaaa gcgtgctatg
    17161 aagatgagat gttcaacatc agatacttta agaagggctc cgcacacatc acgttcagga
    17221 aaccagaact ggttgatcgg ctaaatgata ttattgccag gcactattcg gaaatgttac
    17281 cttcattata aagctctaag aatgaattca attatgtatt ttagcttcat tccctcacgc
    17341 aaatttattt gggggttctt atgggggtta ttcatttatc caacacagat taatcattta
    17401 aaatcaatat attaatactc atattcgact cctgtgatct tccgccaaaa tgcctcttct
    17461 gacgttctcc aaccccttgt aatactgtca atccagatat tttctactgc tcaatattca
    17521 atcggcttca ggaatacctg gtctaaggtt ttgtgatgga cgatgagcgg ctgaagaatc
    17581 cgcctgtcgg ttcttctgtc ctcgaacgca tccgcgatat tcgcgccagc atgcgccgtg
    17641 tttatttgca ggtgatttgc tcccctgctg actctcagcc aactgtatcg tcattaaggt
    17701 gaagatgtag ttttacacgc tccagaacct ccttttttat acgactattc tatttcttta
    17761 accgctggcg aaaaaactga cctatagact tcatcaataa tcagactgcc atcaagatta
    17821 atttgttcat ttaatatatc aaatcaactt gttttatttt tactatcaaa aatagctcat
    17881 tgccttacta taattaatat ataaattcgg tgattaattc ttaacatgct tttgctaata
    17941 atctcaattg ctggccctat aatattgcgc tagcattgtt ttctggttgt atcagcgata
    18001 ctcaaaaatt cttaatacaa tactcattcg actggtactt atttgtaact cagttatatt
    18061 ttgtcgcccg gtgattcaga agaatgcaaa aaacggctac cactccatca aaaatacttg
    18121 atctcactgc cgcggcattt ttacttgtcg cctttctgac gggtattgcg ggcgctcttc
    18181 agactcctac cctaagtata ttcctcgcag atgaactgaa agcccgtcct ataatggtag
    18241 gttttttctt caccggtagc gctattatgg gaattctggt cagtcaattt ctggcaaggc
    18301 actccgataa acaaggcgac cgtaaattac tgattctgct atgttgctta tttggagtgc
    18361 tggcctgcac gctttttgcg tggaatcgca actacttcat tctcctctct acgggcgtac
    18421 ttctgagtag ttttgcttct accgcaaacc cgcaaatgtt cgctctcgcc cgtgaacacg
    18481 ccgacagaac aggccgtgag acggtcatgt tcagtacatt tttacgtgct cagatctcgc
    18541 ttgcctgggt tatcgggcca ccgctcgctt atgaactggc aatggggttt agttttaaag
    18601 tgatgtatct caccgctacc atcgcatttg ttgtttgcgg gctgatagtc tggttgtttt
    18661 tgccatcaat acaaagaaat attcctgtcg ttacccaacc cgtagaaatt ttaccctcca
    18721 cccataggaa gcgggatacg cggctacttt ttgtggtctg ttcaatgatg tgggcggcga
    18781 ataatctcta catgataaat atgccgctat ttattattga tgaactgcat ctaaccgata
    18841 aactggctgg agaaatgatt ggtatcgctg ccggtctgga aattccgatg atgttaatcg
    18901 caggctatta catgaaacgt attggcaagc gactattaat gctcattgct atcgtgagtg
    18961 gtatgtgttt ttacgccagc gtactcatgg cgacgactcc ggcggttgag ctggaattgc
    19021 aaattctaaa tgccatcttc cttggtattc tctgtggtat cggcatgctt tattttcagg
    19081 acttgatgcc tgaaaaaata ggctctgcga caacgttata tgcaaatact tcacgcgtcg
    19141 gctggattat cgccggctct gttgacggaa ttatggttga aatctggagc taccatgcgt
    19201 tgttctggct ggcgataggg atgttgggta ttgcgatgat ttgcctgctg tttattaaag
    19261 atatttagct caccagtctg ggctaagaaa aatcggcgtg gcgcaaacag agccatcctc
    19321 gccatttttg ctatcatgcc tgcatacata aacgacaaaa cagtatgcag agggaaaaat
    19381 gggttccacc agaaagggga tgctgaacgt tctgattgcc gccgtgttgt ggggaagttc
    19441 aggggtctgt gcgcaataca tcatggagca aagccagatg tcgtcgcagt ttttgactat
    19501 gacgcgtttg atattcgccg gtttgattct gctgacgctg tcatttgttc atggcgataa
    19561 aatcttttct attattaaca atcacaaaga tgccattagt ctgctgattt tttccgtggt
    19621 tggcgcgctc accgtacagc tcactttttt gctaaccatc gaaaaatcga atgcagccac
    19681 ggcaacggtg ctgcaattcc tctcaccgac gattatcgtc gcctggttct cactggtgcg
    19741 taaatcgcgc ccgggcattc tggttttctg cgctattttg acatcgctgg tcgggacttt
    19801 tttattggtg acacacggta atccgacgtc attatcgatc tctcctgccg cgttgttctg
    19861 gggcattgcc tcggcatttg ctgctgcatt ctataccacc tatccctcaa cgctaattgc
    19921 ccgctatggc acgttaccag tcgtcggctg gagtatgctg attggcggtc tgattctgtt
    19981 gcctttttat gccagacaag gaacaaactt tgtcgttaac ggcagtttga ttctggcgtt
    20041 tttttatttg gtggtcattg gtacgtccct gacatttagt ctgtacctga aaggagcaca
    20101 attaattggc ggtccaaaag ccagcatttt gagctgtgca gaaccattaa gtagcgcgct
    20161 actctctttg ctgttgctgg ggatcacgtt cacattaccg gactggctgg gaacgctgct
    20221 gattctgtca tcggtgattt tgatttcaat ggattcccgt cgccgcgcca gaaaaataaa
    20281 tcgtccggcg cggcatgagt gagaattacc agccaagcac cgcgccaccg ttaaaaatgg
    20341 tttctgccgc tttagcgact tcgggtgatt gataagattg cagaaattcc ttcacgtttt
    20401 ctgcattctt attatcttcc cgtgccacca aaatattcac atacggcgaa ttcttatctt
    20461 caataaatac gctgtcgtgc accggagaaa gccctgtctg ctgaatgtaa gtggtgctga
    20521 taatcgctac atcaactttg ggatcatcca gtacgcgcgg gagctgcgcc ccctcgagtt
    20581 ccataatctg caaatgacga ggattatcgg ttatatccag cgcggtaggt aataaccctt
    20641 ttccctcttt cagag
//
LOCUS       DAJVTL010000077        20198 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.078, whole genome shotgun sequence.
ACCESSION   DAJVTL010000077 DAJVTL010000000
VERSION     DAJVTL010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20198
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.078"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..920
                     /gene="dcyD"
                     /locus_tag="OQQ26_002671"
     CDS             <1..920
                     /gene="dcyD"
                     /locus_tag="OQQ26_002671"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HCS1858081.1"
                     /translation="LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGA
                     DTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQ
                     IEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQCEGA
                     VNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKE
                     LELTASAEIILWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGI
                     SQKRFKDEGPILFIHTGGAPALFAYHPHV"
     gene            935..1604
                     /gene="tcyL"
                     /locus_tag="OQQ26_002672"
                     /pseudo
     CDS             935..1604
                     /gene="tcyL"
                     /locus_tag="OQQ26_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416428.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
     gene            1601..2353
                     /gene="yecC"
                     /locus_tag="OQQ26_002673"
     CDS             1601..2353
                     /gene="yecC"
                     /locus_tag="OQQ26_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HCS1858082.1"
                     /translation="MSAIEVKNLVKKFHGQTVLHGIDLEVKPSEVVAIIGPSGSGKTT
                     LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
                     LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
                     MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
                     QGRIVEQGAAKELFADPQQPRTRQFLEKFLLQ"
     gene            2583..3305
                     /gene="sdiA"
                     /locus_tag="OQQ26_002674"
     CDS             2583..3305
                     /gene="sdiA"
                     /locus_tag="OQQ26_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
                     /protein_id="HCS1858083.1"
                     /translation="MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSL
                     CVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE
                     AQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRE
                     SLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNM
                     QKKINAPNKTQVACYAAATGLI"
     gene            complement(3373..3597)
                     /locus_tag="OQQ26_002675"
     CDS             complement(3373..3597)
                     /locus_tag="OQQ26_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HCS1858084.1"
                     /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
                     MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
     gene            complement(3584..3760)
                     /locus_tag="OQQ26_002676"
     CDS             complement(3584..3760)
                     /locus_tag="OQQ26_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858085.1"
                     /translation="MIKIFIGHYINVFYSTADITLKKQPLLFLAKLMVYSAALTFFNA
                     NFHCNMTRKINEYA"
     gene            4056..4712
                     /gene="uvrY"
                     /locus_tag="OQQ26_002677"
     CDS             4056..4712
                     /gene="uvrY"
                     /locus_tag="OQQ26_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HCS1858086.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
                     TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
                     "
     gene            4709..6541
                     /gene="uvrC"
                     /locus_tag="OQQ26_002678"
     CDS             4709..6541
                     /gene="uvrC"
                     /locus_tag="OQQ26_002678"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310678.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HCS1858087.1"
                     /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS
                     QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEV
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY
                     GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET
                     LFFEPEGEGFSLPTDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            6598..7146
                     /gene="pgsA"
                     /locus_tag="OQQ26_002679"
     CDS             6598..7146
                     /gene="pgsA"
                     /locus_tag="OQQ26_002679"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HCS1858088.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARADLLDQ"
     gene            7299..7374
                     /locus_tag="OQQ26_002680"
     tRNA            7299..7374
                     /locus_tag="OQQ26_002680"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7332..7334,aa:Gly,seq:gcc)
     gene            7429..7502
                     /locus_tag="OQQ26_002681"
     tRNA            7429..7502
                     /locus_tag="OQQ26_002681"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7461..7463,aa:Cys,seq:gca)
     gene            7515..7601
                     /locus_tag="OQQ26_002682"
     tRNA            7515..7601
                     /locus_tag="OQQ26_002682"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7549..7551,aa:Leu,seq:taa)
     gene            7797..8462
                     /gene="yecA"
                     /locus_tag="OQQ26_002683"
                     /pseudo
     CDS             7797..8462
                     /gene="yecA"
                     /locus_tag="OQQ26_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416421.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YecA"
     gene            complement(8524..9735)
                     /gene="tyrP"
                     /locus_tag="OQQ26_002684"
     CDS             complement(8524..9735)
                     /gene="tyrP"
                     /locus_tag="OQQ26_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HCS1858089.1"
                     /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
                     LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVF
                     IIGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
                     LIAAGLLPEVG"
     gene            9925..10164
                     /locus_tag="OQQ26_002685"
     CDS             9925..10164
                     /locus_tag="OQQ26_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HCS1858090.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
                     EGMTAGELVAFLAAKGKFIPSEDGFSTDQSKICRH"
     gene            complement(10202..10699)
                     /gene="ftnA"
                     /locus_tag="OQQ26_002686"
     CDS             complement(10202..10699)
                     /gene="ftnA"
                     /locus_tag="OQQ26_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HCS1858091.1"
                     /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
                     RHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
                     ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(10871..11194)
                     /locus_tag="OQQ26_002687"
     CDS             complement(10871..11194)
                     /locus_tag="OQQ26_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecR-like lipofamily protein"
                     /protein_id="HCS1858092.1"
                     /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
                     HAHTDRYVSRGIADRACQQEGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
                     FPVFL"
     gene            11457..11543
                     /gene="azuC"
                     /locus_tag="OQQ26_002688"
     CDS             11457..11543
                     /gene="azuC"
                     /locus_tag="OQQ26_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein AzuC"
                     /protein_id="HCS1858093.1"
                     /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR"
     gene            11659..11910
                     /locus_tag="OQQ26_002689"
     CDS             11659..11910
                     /locus_tag="OQQ26_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2766 domain-containing protein"
                     /protein_id="HCS1858094.1"
                     /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
                     LKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
     gene            complement(11989..12492)
                     /locus_tag="OQQ26_002690"
     CDS             complement(11989..12492)
                     /locus_tag="OQQ26_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HCS1858095.1"
                     /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
                     AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
                     QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
                     VVSHQLH"
     gene            13289..14185
                     /gene="araF"
                     /locus_tag="OQQ26_002691"
     CDS             13289..14185
                     /gene="araF"
                     /locus_tag="OQQ26_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000548674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter substrate-binding
                     protein AraF"
                     /protein_id="HCS1858096.1"
                     /translation="MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEW
                     KFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKAR
                     GYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAV
                     MAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPE
                     VKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLL
                     PSPDVHGYKSSEMLYNWVAKDV"
     gene            14348..15862
                     /gene="araG"
                     /locus_tag="OQQ26_002692"
     CDS             14348..15862
                     /gene="araG"
                     /locus_tag="OQQ26_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter ATP binding protein
                     AraG"
                     /protein_id="HCS1858097.1"
                     /translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
                     GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
                     IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR
                     NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
                     GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGDERLRLNAVKAPGVRTPIS
                     LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
                     LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADQHIRSLNIKTPG
                     AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
                     AVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA"
     gene            15877..16863
                     /gene="araH"
                     /locus_tag="OQQ26_002693"
     CDS             15877..16863
                     /gene="araH"
                     /locus_tag="OQQ26_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter permease AraH"
                     /protein_id="HCS1858098.1"
                     /translation="MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPN
                     FATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESL
                     WIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDE
                     SFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVV
                     RTKIIIFVLSGQVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKI
                     SYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
     gene            17030..17830
                     /gene="otsB"
                     /locus_tag="OQQ26_002694"
     CDS             17030..17830
                     /gene="otsB"
                     /locus_tag="OQQ26_002694"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HCS1858099.1"
                     /translation="MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQG
                     LQLLATASDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAI
                     ARDISVQLHTVIAQYPGAELETKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQ
                     QGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVK
                     IGTGATQASWRLAGVPDVWSWLEMITTALQQKRENNRSDDYESFSRSI"
     gene            17805..19229
                     /gene="otsA"
                     /locus_tag="OQQ26_002695"
     CDS             17805..19229
                     /gene="otsA"
                     /locus_tag="OQQ26_002695"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
                     /protein_id="HCS1858100.1"
                     /translation="MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSG
                     ETGNEDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPA
                     WDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT
                     PEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKA
                     FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLA
                     YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLY
                     YLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA
                     NELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISD
                     LKQIVPRSAESQQRDKVATFPKLA"
     gene            complement(19236..19664)
                     /gene="uspC"
                     /locus_tag="OQQ26_002696"
     CDS             complement(19236..19664)
                     /gene="uspC"
                     /locus_tag="OQQ26_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspC"
                     /protein_id="HCS1858101.1"
                     /translation="MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPE
                     MYNQLAAPMLEDLRSVMQEKTQSFLDKLIQDAGYPVDKTFIAYGELSEHILEICRKYH
                     FDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD"
BASE COUNT         5242 a         4654 c         5146 g         5156 t
ORIGIN      
        1 atctgccgcg cttttctgat tatctaggac gggaaatttt catcaaacgg gatgacgtca
       61 cccccatggc aatgggcggc aataaattac gtaagctaga atttctcgcg gcagatgctc
      121 tgcgcgaagg tgccgatacg ctgattactg ccggggcgat ccagtctaac catgtgcggc
      181 agactgccgc agtcgctgcc aaactcggtc tgcactgcgt ggcgctgctg gaaaatccta
      241 ttggcacaac cgcagaaaac tatttaacca acggcaatcg cttgttgctg gatctgttca
      301 atacccagat tgaaatgtgc gacgcactga ccgatcccaa tgcccaactg gaagagctgg
      361 cgacgcgagt cgaagcacaa ggctttcgcc cgtatgtcat tccggttggc ggttctaatg
      421 ctcttggcgc gctaggttat gtggagagtg cgctggaaat tgcgcaacag tgtgaagggg
      481 cggttaatat ttcgtcggtg gtagtcgcat cgggcagtgc cggaactcac gccggactgg
      541 ctgttgggct ggaacacctg atgcctgaaa gcgaactgat tggcgtgacc gtgtcgcgtt
      601 ccgttgccga tcagttgccg aaagtggtta acctacaaca ggcgattgcg aaagaactgg
      661 agctgaccgc atcagcggaa attatactct gggatgacta ttttgcacct ggctacggcg
      721 tgccgaacga cgaaggcatg gaagcagtga aattgctggc gcggctggaa ggcattctgc
      781 ttgatcctgt gtataccgga aaagcgatgg cggggctgat tgacggtatc agtcagaaac
      841 gcttcaaaga tgaagggccg attctgttta ttcataccgg cggtgcgcct gcgctgttcg
      901 cctatcatcc ccacgtttag ctccggaaac gctcatgcaa gaaagtatac aactggttat
      961 tgattccttg ccgttcctgc tgaaaggggc tgggtatacg ctgcaactca gtatcggcgg
     1021 catgtttttt ggcttactgc tcgggtttat tctcgcgctg atgcgcctgt cgccaatctg
     1081 gcccagtgcg ctggctggcg cgtttttata tctctatttt tcgtggtacg ccgctcatcg
     1141 cacaactgtt tatgatctat tacggcttgc cgcagtttgg catcgaatta gatcccattc
     1201 cgtcagcaat gattggtctg tcgctgaaca ctgccgccta tgccgccgaa acactgcgcg
     1261 ccgccatttc ttctattgat aaaggtcagt gggaagcggc agccagtatt ggtatgacgc
     1321 cgtggcagac catgcgtcgc gcgattttgc cacaggcggc gcgtgtggcg ttgccgccgc
     1381 tgtcgaacag ctttatcagc ctggtaaaag atacgtcgct ggccgcgaca atccaggtgc
     1441 cggagctgtt ccgtcaggcg cagttgatta cctcgcgcac gctggaggtg ttcaccatgt
     1501 acctggcggc ttcgctcatc tactggatca tggcgacagt attatcgacg ttgcagaacc
     1561 attttgagaa tcaacttaat cgccaggaga gagaaccaaa atgagtgcca ttgaagttaa
     1621 gaacctggtg aaaaaatttc acggtcagac ggtgctgcac ggtatcgacc tcgaggtaaa
     1681 gcctagcgaa gtggtggcaa ttattggtcc gagtggttcc ggcaaaacca cgttgctacg
     1741 cagcataaat ctgctggaac aaccggaagc gggaacgatc accgttggcg atatcactat
     1801 tgatactgca cgttcattaa gtcagcaaaa atcgctgatt cgccagttgc gtcagcacgt
     1861 cgggtttgtc ttccagaact ttaatttgtt tccgcatcgt acggtgctgg aaaacattat
     1921 tgaagggccg gtgatcgtca aaggcgaacc gaaagaagag gccacggcgc gcgctcgcga
     1981 gctgttggcg aaagttgggc tggccggtaa agaaaccagc tatccacgtc gtttgtctgg
     2041 cggtcaacag caacgtgttg cgattgcacg tgcgctggca atgcgtcctg aggtgatttt
     2101 gtttgacgag ccaacgtcgg cgctggatcc agagctggtg ggcgaagtcc tgaacaccat
     2161 ccgtcagctg gcgcaggaaa agcgcacgat ggtgattgtg acgcacgaaa tgagctttgc
     2221 ccgggatgtt gcggaccggg cgatttttat ggaccagggg cggatagtcg agcagggggc
     2281 agcaaaagag ttatttgccg atccccagca gcctcgcacc cgccagttcc tcgagaagtt
     2341 tctgctgcaa taataagaaa aaatcagccc cgacgattca cctgtcgggg cgggacgcca
     2401 tttcaagcgt gataaaactg cttaacaaat cagcataact cattaataac ataagagaat
     2461 gcgatggctt gcaaaagtaa ttcattgcct gaataatata aattatatat aaatcttatt
     2521 tatgtgatag tttgaattat cattataaat gatactcact ctcaggggcg ttgcggttta
     2581 ctatgcagga tacggatttt ttcagctggc gtcgcacgat gctgttgcgt tttcagagga
     2641 tggaggccgc agaagaggtc taccatgaaa tagagcttca ggctcagcag ctggagtacg
     2701 attactattc gttatgtgtt cgccacccgg taccattcac tcgacctaaa gtggctttct
     2761 acaccaatta ccctgaggcg tgggttagtt attatcaggc aaaaaacttt ctcgcaattg
     2821 atccggtgct gaaccctgaa aactttagtc agggccattt aatgtggaat gatgacttat
     2881 tcagcgaagc acagccgtta tgggaagccg cgcgcgcgca tggtttacgc cgcggtgtca
     2941 ctcagtattt aatgctgcca aatcgggccc tgggcttttt gtccttttcc cgttgcagca
     3001 cgcgcgaaat acccattctt agtgatgaac tgcaattaaa aatgcagtta ctggtgcgcg
     3061 aaagtctgat ggctctgatg cgtttaaatg atgaaatagt gatgacgcca gagatgaatt
     3121 tcagcaagcg cgaaaaagaa attctgaggt ggacggcgga agggaagaca tcagcagaga
     3181 tagcgatgat tttgtcaatc tctgagaata cggtcaattt ccaccagaaa aacatgcaga
     3241 aaaaaattaa tgcaccaaat aagacccagg ttgcctgtta cgcggccgct actggcttaa
     3301 tttgatctct tttctgttct gcgtgccaga tgcaaaaacc ggctgaaagg cacgctctca
     3361 gccggtttta tattactgac ggtaggcttg tttaatttgc ttaaccgttt tggaaaatac
     3421 tgcagcctgg gtttcgtctt cgatcagcgc aagctgtttt tccatcttta acatcacgcg
     3481 gcccgcgtca gcttgtccca tcgcctgcag catcagcgtc agcatcgctt tcaggcagga
     3541 gacttcattt gccagttctt gattattctc ggcagtagaa aaatcaggcg tactcattta
     3601 ttttcctcgt catgttgcaa tgaaaatttg cgttgaaaaa tgttaaggcg gcggagtata
     3661 ccataagctt tgctaaaaat agcagtggtt gttttttgag cgtgatatcg gcagtgctat
     3721 aaaatacgtt aatataatga ccaataaata tttttattat gaatgttttt tgcccgtatt
     3781 gttcgggtta attaatgtta catattcagc gggctgattt tcatttttgc tgaataaagt
     3841 caatttttgt cacatttcat cgccgggctt actgtgaaac gatcccggaa gccgttggtg
     3901 acgggcgtga ccataactgt ggacaatcga atttacaaaa acgagagaaa aatcgaatac
     3961 ccaccatttt taacgtttca aagttgcaat aaaaaccgct aatatacgaa tgactaacta
     4021 tcagtagcgt tatccctatt tctggagata ttcctttgat caacgttcta cttgttgatg
     4081 accacgaact ggtgcgcgca gggatacgac gcattctgga agatataaag ggtataaaag
     4141 tcgtcggtga ggcatcgtgc ggtgaagacg ccgttaagtg gtgccggaca aatgccgttg
     4201 acgtggtgct aatggacatg agtatgccgg gcattggcgg tcttgaggcg acgcgtaaaa
     4261 tcgcgcgttc cacagctgat gtcaaaatca tcatgcttac ggtccataca gaaaaccctt
     4321 taccagcgaa agtcatgcag gccggtgctg cgggctacct cagcaaaggc gcggctccgc
     4381 aggaagtcgt gagtgcgatc cgttctgtct attcagggca gcgttacatt gcttctgaca
     4441 tcgctcaaca aatggcgtta agccagatcg aaccagaaaa aacagaaagc ccatttgcca
     4501 gtttgtctga acgtgaattg cagattatgc tgatgatcac caagggccag aaggtcaatg
     4561 agatctcaga acagctcaat ctcagtccga aaacggtgaa cagctaccgc tatcgtatgt
     4621 tcagtaaact aaacattcat ggcgatgttg agctgactca cctggcaatt cgccatggtc
     4681 tgtgtaatgc ggagacatta tcaagtcagt gagtgatcag tttgacgcaa aagcgttttt
     4741 aaaaaccgta accagccagc caggcgttta tcgcatgtac gatgctggtg gtacggttat
     4801 ctatgtcggc aaagcgaaag acctgaaaaa acggctttcc agctatttcc gcagcaacct
     4861 cgcttcgcgc aaaaccgaag cgctggtcgc ccagatccag caaattgatg taacggttac
     4921 gcatacagaa accgaagcgc tgttgctgga acacaactac atcaaactct atcagccgcg
     4981 ttacaacgtt ttgctacgcg atgataaatc ttatcctttt atcttcctga gtggcgatac
     5041 ccacccgcgt ctggctatgc atcgtggtgc gaagcatgcc aaaggtgaat atttcggccc
     5101 gttcccgaat ggctatgctg tacgtgaaac actggcgtta ctgcaaaaga ttttccccat
     5161 tcgccagtgc gaaaatagtg tttatcgcaa tcgctcgcgt ccgtgtctgc aatatcagat
     5221 agggcgctgt ctgggaccgt gcgttgaagg actggtgagt gaagaagaat atgctcagca
     5281 ggtcgagtat gtgcgcctgt ttttgtctgg caaagatgat caggtgctta cgcaactcat
     5341 tagtcgtatg gaaactgcca gccagaatct ggagtttgaa gaagctgcac gtattcgcga
     5401 ccaaattcag gcggtgcgac gcgtcaccga aaaacaattc gtttccaata ccggcgacga
     5461 ccttgacgtt attggtgtgg cgttcgatgc gggcatggct tgtgtccacg tattgttcat
     5521 tcgtcagggc aaagtgctcg gcagccgcag ctatttcccg aaagtgcctg gcggtacgga
     5581 actgagcgag gtggtggaaa ccttcgtagg tcagttctat ttacaaggca gccagatgcg
     5641 caccttaccg ggtgagatcc tgctcgattt taatcttagc gataaaacgc tgctcgccga
     5701 ttccctttca gaactggcgg gacgcaagat taatgttcaa accaaacctc gcggcgatcg
     5761 ggcgcgttat ctgaaactcg cgcgcaccaa tgcggcgacg gccttaacca gcaaactttc
     5821 gcagcaatct accgttcacc agcggctgac cgcgcttgcc agcgtgttga aattgccgga
     5881 agtgaagcgg atggagtgct ttgacatcag ccataccatg ggtgaacaaa ccgtcgcttc
     5941 ctgtgtggtg tttgatgcta acggcccgct gcgtgcggag tatcggcgct ataacattac
     6001 tggcatcaca ccgggcgatg attatgcggc gatgaatcag gtgctgcgtc ggcgttatgg
     6061 taaagccatt gacgacagta agatcccgga tgtgatcctt atcgacggcg gcaaaggcca
     6121 gcttgcgcag gcgaaaaatg tattcgccga actggatgtc tcatgggata aaaatcatcc
     6181 actgctactt ggcgttgcca aaggagcaga tcgtaaggct gggctggaaa cactgttctt
     6241 tgagccggaa ggtgagggat tcagtttgcc gacagattct cccgcgctgc atgttatcca
     6301 gcatattcgc gatgaatcac acgatcacgc gattggcggg caccgtaaaa aacgggcgaa
     6361 ggtcaaaaat accagctccc tggaaaccat tgaaggcgtc gggccaaaac gtcggcaaat
     6421 gttgttgaaa tatatgggcg gtttgcaagg tttacgtaac gccagcgtcg aggaaattgc
     6481 aaaagtgccg ggtatttcgc aaggtctggc agaaaagatc ttctggtcgt tgaaacattg
     6541 atgtctctgt agcaacatag gggtaatctt actgacaaca gatagttacc cgtcattatg
     6601 caatttaata tccctacgtt gcttacactg tttcgtgtca tccttatccc attctttgta
     6661 ttggtctttt atctgcctgt cacctggtcg ccgtttgccg ccgcgctcat tttctgcgtc
     6721 gcggcggtga ctgactggtt cgatggtttt ctggcacgcc gctggaacca gagtacccgg
     6781 tttggtgctt tccttgaccc tgtcgcagat aaagttctcg tggctatcgc catggtgctg
     6841 gtaaccgagc attatcacag ctggtgggtg accttaccgg cagcaacgat gatcgcccgt
     6901 gaaattatta tttctgcgct acgcgaatgg atggcggagt tgggtaaacg cagtagcgtg
     6961 gctgtctcct ggattgggaa agtgaaaacc actgcccaga tggtggcgtt ggcatggctg
     7021 ctgtggcgtc cgaacatttg ggttgagtac gccggtattg cacttttctt tgtggctgcg
     7081 gtactgactc tgtggtcaat gttgcaatat ttgagcgctg cgcgtgcaga tttgcttgat
     7141 cagtgatcgt ttcggcgcaa ttttcagcaa acgatcaaaa gtggtgaaaa atatcgttga
     7201 ctcatcgcgc caggtaagta gaatgcaacg catcgaacgg cggcactgat tgccagacga
     7261 taataaaatc aagtgattaa ctgattgcat tgatgaatgc gggaatagct cagttggtag
     7321 agcacgacct tgccaaggtc ggggtcgcga gttcgagtct cgtttcccgc tccagtttaa
     7381 aagacatcgg cctcaagcgg atgtctggct gaaaggcctg aagaatttgg cgcgttaaca
     7441 aagcggttat gtagcggatt gcaaatccgt ctagtccggt tcgactccgg aacgcgcctc
     7501 cactttcttc ccgagcccgg atggtggaat cggtagacac aagggattta aaatccctcg
     7561 gcgttcgcgc tgtgcgggtt caagtcccgc tccgggtacc atgggaaaga taagaataaa
     7621 atcaaagcaa taagcagtgt cgtgaaacca ccttcgggtg gtttttttgt gcctgcaact
     7681 tgtcgttaca ccctccttaa tttttaatca ccggcaaagc cactcaaaaa gtatctctga
     7741 tacggaccgg catgtaagat aggtgctggc gagttgagat ccacaaggaa aagcgtatga
     7801 aaacgggacc gttaaacgaa agtgagttgg aatggctgga cgatattctg accaaataca
     7861 acactgacca cgccatcctt gatgtggcgg agctggacgg tttattgacg gcggtgttga
     7921 gttctccgca atagattgaa ccggaacagt ggctggttgc cgtgtggggt ggggctgact
     7981 atgtgccgcg ctgggcgtca gagaaagaga tgacgcgctt tatgaacctg gcttttcaac
     8041 atatggccga taccgcagag tgtctgaacg aattcccgga gcagtttgag ccgttattcg
     8101 gcttgcgaga agtcgatggc agcgagctga cgattgttga ggagtggtgc tttggctata
     8161 tgcggggcgt ggcactttct gactggtcaa cgttgcccga ttcgttaaaa ccagcgctgg
     8221 aggcgattgc gctgcacggt actgaggaaa acttcgagcg ggtagagaag atgtcgccag
     8281 aagcgtttga agagagcgta gatgccattc gactggcggc gcttgattta catgcgtact
     8341 ggatggcgca tccgcaggaa aaagctgttc agcaaccgct caaagcagaa gagaaaccgg
     8401 ggcgtaacga tccttgcccg tgcggcagtg gtaagaaatt taagcagtgc tgcctgcatt
     8461 aagaagtcag attgggtgtc agcgttaatt ctggcaccca ataaggaatt tgaggctatc
     8521 taatcacccc acttctggta acaaccctgc cgcaatcaaa aattgcacgc caatcacagc
     8581 aataccacag agaaacacca ccaccagcgc cggacgacca cctttgaccc ggtaacccgc
     8641 ttgaggattg tgctttctgc tttgccaggt caacagcgaa gggataatca atgccagtac
     8701 cgccagcgcc acaccggcgt aacccagcgc catcacaaat cctcgtggat aaaacagtgc
     8761 aaacgccaac ggcggcagaa aggtaattgc accagtttgc aatcgtccac caacggtatt
     8821 tgaacgctga aacaaatctg ccagataatc aaacaagcct aacgcaacgc cgagaaatga
     8881 cgtggcgagg gctaaatcag caaataaatg caccgccagc tcaacatgcg gagaggccac
     8941 catttcgcgt aacgcctgta acagcccgtt taatccggca tgattagcca gcaatcccat
     9001 aaaggttgtt gaatcaatgc tgccaagcgt cgccacctgc cagaaaatat atgccaccag
     9061 ggggatcgca ctaccgatta taaacaccca gcgtagctta cgaatgttgc catccatata
     9121 gctgacaata ctcggcacgc taccgtgaaa accaaacgaa gtaaaaatca ccgggattgc
     9181 agacagtgcc agcccctgtt gcaacggcag ggttaaaaga ttcactttgt gaatatgcgg
     9241 tagcagcaat accagcatca ccaccagaaa aataattttg gcgctgaaca gaaaacggtt
     9301 aaacaaatcg accagcgatg tcccgacaca aaccacgcca ccggcaacaa aagtgaacaa
     9361 cagcacgcca gcggttgccg acattgaaat acctgtccag tcgctgatgc tggaggccaa
     9421 caattcaccg gcaccgctga tgtatgccgc agtcagagca tacattaaga acatcatact
     9481 gaagcccgtc agccactgac cgtagcgtcc cagatagcgt tttgccagcg tgccaagacc
     9541 ggtatctgcc ggaacatgct ggtacacctc cagcagtaat agcgccgtgt agcacatcaa
     9601 cgcccaaagc ccaatcaaca agattaacgt gacgctaaaa ccaacacctg ccgcagccag
     9661 cggcattgcc agcatgcctg cgccaattgt ggttcccgcc acgataaaaa cacttcccag
     9721 agttctgttt ttcacgcttt cttctgtcct gacgatcttt atgagtgata tctgcggcgc
     9781 aggttaaggc ataacggctg cttcgtcaaa ccgacgttac atatagtgta aatataaatg
     9841 tacaataaaa gcgtttagtt ctgcgctggc gcaaagtctt cataagcggc aatcgctacg
     9901 ctaggctttt tttgaggagg aacgatggac tctattcacg gtcatgaagt gttaaatatg
     9961 atgattgaat caggcgagca atatacgcat gccagtctgg aagcagcaat taaagcgcgt
    10021 tttggtgaac aggcacgttt tcacacctgc tcggcagaag ggatgactgc gggagagctg
    10081 gtagcgtttc tggcagcaaa aggcaaattt ataccttcgg aagacggttt ttcgaccgat
    10141 cagagtaaga tttgccgtca ctgatttgaa acggcggcag aaaacctgcc gccggagagc
    10201 attagttttg cgtgtcgagg gtagagagtt ctttgtcgat aaaatacaga ccttcgccgc
    10261 ttttgcctgc caggcttaat ttatcaataa tcgatttgaa cagtttctct tcttcatgct
    10321 gctcagaaac ataccattgc aggaaattaa atgttgggta gtcctgattg gtcattgcag
    10381 catgagccag ttcgttaatt ttctgcgtga ttaattgttc gtgtttatag gtttcctgga
    10441 ataattcatc aagtgaggaa tattcagcaa acggagattc aacggtatta atacgcggta
    10501 aattgccggt atcagtcagg taatcaaaca gacgctgcat atgcgtcatc tcttcttggg
    10561 cgtggcggcg caggaacgca gcagcacctt cgaaggtatg atagctgcac caggcgctca
    10621 tttgctgata aagcagtgaa gagtacagtt ccaggttcat ctgctcatta agtttttcaa
    10681 tcatttctgg tttcagcatg atagtgctcc acaaaggtta tatttgttgc tgtggcgtca
    10741 ctataatttg ttattttatt atttgcaaaa ggtaaaatat aaacttcaat tattaaaaat
    10801 acgaatggga ataaaacgca ttactgctat ttatttaatc agcgaagatc cccctcgctg
    10861 attaaaacat ttagagaaag acagggaagg cggaatgatg gcactgatat gacaaagtga
    10921 attccgtatt caaacataag gaacccgcaa aaaggctaca gttgcctact ggctgaccaa
    10981 aggggatcgc gtgggtatag ccttcctgct ggcatgcgcg atcggcgatc ccgcgactga
    11041 cataacgatc ggtatgggca tgctgcaaaa aagcctggtc ataaaccaac cgtacaatac
    11101 ctgttgccgc gtcaacttcg ctcacatggg cttggcgagt aaccgtacac cccgccagcg
    11161 ttattaatga aagagtcaga atcagaagtc tcatggtcca gccagaagag taaaagaaag
    11221 cactatttta cgcgttacag cgctgcgaca atggccggaa aagacgtctg gcaggcgcta
    11281 tttcttgcca tctgtaggtg tcagaaatag gggggctgtt ttttgattat catttttata
    11341 acattaaagg ggtatttatg tgatttgtat cacataaaga ttgatttttg tgatggttgt
    11401 catattataa gcgcaaagac aataacacct gtataacaaa tggtcggagt gccgcgatga
    11461 aactgcgcaa aatcctgaaa agtatgttca ataactattg caagacgttc aaagacgtac
    11521 cgccaggcaa tatgttccga taacaaaaaa cctgctccgg caggtttttt tgtgtcctga
    11581 tgacggtgga tgtgactatc gctgaagatg tgaagccgct actataacgg catttcaaaa
    11641 tgctatcagg agtttacgat gtcccagccg ctgaatgccg atcaggaact ggtttctgat
    11701 gtggttgctt gccagttggt tatcaaacaa attctggatg ttctcgatgt aatcgcgccc
    11761 gttgaagttc gtgaaaaaat gtccagtcag ctgaagaata tcgactttac taaccatccc
    11821 gccgccgcag acccggtcac catgcgggca atccaaaaag ccatcgcgct tattgaactc
    11881 aagtttaccc cacagggtga atcccattaa aaaaaacgct gcttcaaaca gatgaggcag
    11941 cggtttctca aaaccttcat cggcgcaatg cattagcgcc gatgatgatc aatgcaactg
    12001 gtgtgacacg acattcagaa catgttggtc ggtctgcaca gggcacatac ccgcaagttt
    12061 cgcactgcgc acttcatcaa gaatggtttg cagcaacaga ccatcatgct gctgttcttt
    12121 ttccagatcg cgcaggaaat tgacggttga atcatcattc agttctttcg cttcatcggc
    12181 taactgcgcc agcgtgcttg aacgttgctc gtattcttcc atcgtttttt ggaacagttc
    12241 ttccagagag ttcagttttt caccgggaac atcaatggct ttaacgatgg gggtagcgcc
    12301 gacactcttc ataaagttaa acatgcgcat catttgggtc acattactct gtgcctgggc
    12361 gcgaaggaaa gtggcggtgc cgttcagact ctgttcagaa caccagttac tcaggtgaag
    12421 gtagagattg gatgcgtaaa actcgcggtt catttgagag ttgagtttga gaagcattcc
    12481 agcggttgcc atacctaata tccttatatc cagaagtgga gaggtgcaag ataaatcaaa
    12541 acaccataat tactgtttgc agaataattc ctttctgccg gtccgaaatg tgatcgtgga
    12601 gtcaattctg acgatgatct gaaataagaa taacgtctga acgggtataa gaaaatgctt
    12661 aaatcatcaa gtttatatat ttttacattt cattggtgaa atcaatgtaa atgcaatgaa
    12721 ttttaatgat agagcttttt gtatcttgtt gatattaatc gatgaatttg aattcatgat
    12781 gaagtgatga ttttataaag cgttttttca tttttgcgag atggctccca ttatacgtgt
    12841 tctgttaatt aatgagcaca gtgataatta atgacgaaat gaatgacgcg cattttccac
    12901 atctttgagt tgtggttatt acaccatttc aaaaactcaa cgccaggtaa tgcggcctat
    12961 tgactggtta aaaagaagac atcccgcatg ggtaccaaag acaacaagga tttccaggct
    13021 aatcttatgg attaatctgc tgtgcattcg acaatttgtc tgacaaattg gcttttcctt
    13081 atgtcttttc ccgctaaatt tatgcacgtt ctcactgtaa ttctgcgatg tgatattgct
    13141 ctcctatgga gaattaattt ctcgctaaaa ctatgtcaac acggtcactt atcttttaga
    13201 taaaaggtaa tgctttgttt tccgattaat ttaacgaatg tcattcgttt ttgccctaca
    13261 caaaacgaca ctaaagctgg agagaaccat gcacaaattt actaaagccc tggcagccat
    13321 tggtctggca gccgttatgt cacaatccgc tatggcggag aacctgaagc tcggttttct
    13381 ggtgaagcaa ccggaagagc cgtggttcca gaccgaatgg aagtttgccg ataaagctgg
    13441 gaaggattta gggtttgagg ttattaagat tgccgtgccg gatggcgaaa aaacattgaa
    13501 cgcgatcgac agcctggcag ccagtggcgc aaaaggtttc gttatttgta ctcctgaccc
    13561 caaactcggc tctgccatcg tcgcgaaagc gcgtggctac gatatgaaag tcattgccgt
    13621 ggatgaccag tttgttaacg ccaaaggtaa gccaatggat accgttcctc tggtgatgat
    13681 ggcggcgact aaaattggcg aacgtcaggg ccaggaactg tataaagaga tgcagaaacg
    13741 tggctgggat gtcaaagaaa gcgcggtgat ggcgattacc gccaacgaac tggataccgc
    13801 ccgccgccgt acaacgggtt ctatggacgc actgaaagct gcaggattcc cggaaaaaca
    13861 aatttatcag gtacctacca aatctaacga catcccgggg gcatttgacg ctgccaactc
    13921 aatgctggtt caacatccgg aagttaaaca ttggctgatc gtcggtatga acgacagcac
    13981 cgtacttggc ggcgtacgtg caaccgaagg tcagggattt aaagcagccg atatcatcgg
    14041 tattggtatt aacggtgtgg atgcggtgag cgaactgtct aaggcacagg caaccggctt
    14101 ctacggttcc ctgctgccaa gcccggacgt acatggctat aaatccagcg aaatgcttta
    14161 caactgggta gcaaaagacg tttaaccgcc aaaatttacc gaagttaccg acgtggtact
    14221 gatcacgcgt gacaacttta aagaagaact ggagaaaaaa ggtttaggcg gtaagtaatt
    14281 tgccggaaaa attcccctct gcatgatgca gagggggtgt gaacgaccag tgattcacgg
    14341 agacgttatg caacagtcta ccccgtatct ctcatttcgc ggcatcggta aaacgtttcc
    14401 cggcgttaag gcgctgacgg atattagttt tgactgctat gccggtcagg ttcatgcgtt
    14461 gatgggtgaa aatggcgcag gaaaatcaac tctcttaaaa atcctcagcg gcaactatgc
    14521 gccaaccacg ggttctgtag tgattaatgg gcaggaaatg tccttttccg acacgaccgc
    14581 agcactaaac gcgggtgtgg cgattattta ccaggaactg catctcgtgc cggaaatgac
    14641 cgtcgcggaa aacatctatc tcggccagct gccgcataaa ggcggcattg tgaatcgctc
    14701 attgctgaat tatgaggcgg gtttacaact taaacatctt ggtatggata ttgacccgga
    14761 cacgccgctg aaatatctct ccattggtca gtggcagatg gttgaaatcg ccaaagcgct
    14821 ggcgcgtaac gctaaaatta tcgcctttga tgagccaacc agctccctct ctgcccgcga
    14881 aatcgacaat cttttccgcg ttattcgtga actgcgaaaa gaggggcggg ttatcttata
    14941 cgtttctcac cgtatggaag aaatatttgc cctcagcgat gccatcactg tctttaaaga
    15001 tggacgttat gtcaaaacct ttaccgatat gcagcaggtt gaccacgacg cgctggtgca
    15061 ggcgatggtc gggcgcgaca ttggcgatat ctacggctgg caaccgcgta gttatggcga
    15121 tgagcgcctg cgtcttaatg ctgtgaaagc accaggcgtg cgtacgccaa taagtctggc
    15181 ggttcgcagt ggtgaaattg ttgggctgtt tggtctggta ggggcggggc gtagcgaatt
    15241 aatgaaaggt ttgtttggcg ggacgcaaat caccgccggt caggtttata tcgaccaaca
    15301 gccgatcgat attcgtaaac cgagccacgc cattgccgca ggcatgatgc tctgcccgga
    15361 agatcgcaaa gcggaaggca ttattcccgt gcactccgtt cgcgacaata tcaacatcag
    15421 tgccagacgt aaacatgtgc tcggcggttg tgtaatcaac aacggttggg aagaaaacaa
    15481 tgccgatcag cacattcgtt cgctcaacat caaaacgccg ggcgctgagc aactgatcat
    15541 gaatctctca ggcggaaatc agcaaaaagc cattctgggc cgctggttat cggaagagat
    15601 gaaggtcatt ttgctggatg aacctacgcg cggcattgat gttggtgcta agcatgaaat
    15661 ttacaacgtg atttatgcgc tggcggcgca gggtgtggcg gtgctgtttg cttccagcga
    15721 cttacctgaa gtcctcggcg ttgccgaccg gattgtggtg atgcgggaag gtgaaatcgc
    15781 cggtgaattg ttacacgagc aggcagatga gcgtcaggca ctgagccttg cgatgcctaa
    15841 agtcagccag gctgttgcct gagtaaggag agtatgatgt cttctgtttc tacatcgggg
    15901 tctggcgcac ctaagtcgtc attcagcttc gggcgtatct gggatcagta cggcatgctg
    15961 gtggtgtttg cggtgctctt tatcgcctgt gccatttttg tcccaaattt tgccaccttc
    16021 attaatatga aagggttggg cctggcaatt tccatgtcgg ggatggtggc gtgtggcatg
    16081 ttgttctgcc ttgcttccgg tgactttgac ctttctgtcg cctccgtaat tgcctgtgcg
    16141 ggtgtcacca cggcggtggt tatcaacctg actgaaagcc tgtggattgg cgtggcagcg
    16201 gggttgctgc ttggcattct ctgtggcctg gtcaatggct ttgttatcgc caaactgaaa
    16261 ataaatgctc tgatcacgac actggcaacg atgcagattg ttcgaggtct ggcgtacatc
    16321 atttcagacg gtaaagcggt cggtatcgaa gatgaaagct tctttgccct tggttacgcc
    16381 aactggttcg gtctgcctgc gccaatctgg ctcaccgtcg cgtgtctgat tatctttggt
    16441 ttgctgctga ataaaaccac ctttggtcgt aataccctgg cgattggcgg gaacgaagag
    16501 gctgcgcgtc tggcgggtgt accggttgtt cgcaccaaaa ttattatctt tgttctctct
    16561 ggccaggtat cagcgatagc cggaattatt ctggcttcac gtatgaccag cgggcagcca
    16621 atgacgtcga ttggttatga gctgattgtt atctccgcct gcgttttagg tggcgtttct
    16681 ctgaaaggcg gcatcggaaa aatctcatat gtggtggcgg gtatcttaat tttaggcacc
    16741 gtggaaaacg ccatgaatct gcttaatatt tctcctttcg cgcagtacgt ggttcgcggc
    16801 ttaatcctgc tggcagcggt gatcttcgac cgttacaagc aaaaagcgaa acgcactgtc
    16861 tgatgctttt ttccacaaca atttaacgtt ttttcccacc acagccagcc gccacaacgg
    16921 ttggctgttc ttcgttgcaa atggcgaccc ccgtcacact gtctatactt acatgtctgt
    16981 aaagcgcgtt ctgcgcaaaa caataagaaa agagaaggag gagaaccggg tgacagaacc
    17041 gttaaccgaa acccctgaac tatccgcgaa atatgcctgg ttttttgatc ttgatggaac
    17101 gctggcggaa atcaaaccgc atcccgatca ggtcgtcgtg cctgacaata ttctgcaagg
    17161 actacagcta ctggcaaccg caagtgatgg tgcattggca ttgatatcag ggcgctcaat
    17221 ggtggagctt gacgcactgg caaaacctta tcgcttcccg ttagcgggcg tgcatggggc
    17281 ggagcgccgt gacatcaatg gtaaaacgca tatcgttcat ctgccggatg cgattgcgcg
    17341 tgatattagc gtgcaactgc atacggtcat cgcccagtat cccggtgcgg agctggagac
    17401 gaaagggatg gcttttgcgc tgcattatcg tcaggctccg cagcatgaag acgcattaat
    17461 gacattagcg caacgtatta ctcagatctg gccacaaatg gcgttacagc agggaaagtg
    17521 tgttgtcgag atcaaaccga gaggtaccag taaaggtgag gcgattgctg cctttatgca
    17581 ggaagctccc tttatcgggc gaacgcccgt atttctgggc gatgatttaa ccgatgaatc
    17641 tggcttcgca gtcgttaacc gactgggcgg aatgtcagta aaaattggca caggcgcaac
    17701 tcaggcatca tggcgactgg cgggtgtgcc ggatgtctgg agctggcttg aaatgataac
    17761 caccgcatta caacaaaaaa gagaaaataa caggagtgat gactatgagt cgtttagtcg
    17821 tagtatctaa ccggattgca ccaccagatg agcacgccgc cagtgccggt ggccttgccg
    17881 ttggcatact gggggcactg aaagccgcag gcggactgtg gtttggctgg agtggtgaaa
    17941 cagggaatga ggatcagccg ctaaaaaagg tgaaaaaagg taacattacg tgggcctctt
    18001 ttaacctcag cgaacaggac cttgacgaat actacaatca attctccaat gccgttctct
    18061 ggcccgcttt tcattatcgg ctcgatctgg tgcaatttca gcgtcctgcc tgggacggct
    18121 atctacgcgt aaatgcgttg ctggcagata aattactgcc gctgttgcaa gacgatgaca
    18181 ttatctggat ccacgattat cacctgttgc catttgcgca tgaattacgc aaacggggag
    18241 tgaataatcg cattggtttc tttctgcata ttcctttccc gacaccggaa atcttcaacg
    18301 cgctgccgac atatgacacc ttgcttgaac agctttgtga ttatgatttg ctgggtttcc
    18361 agacagaaaa cgatcgtctg gcgttcctgg attgcctttc taacctgacc cgcgtcacga
    18421 cacgtagcgc aaaaagccat acagcctggg gcaaagcgtt tcgaacagaa gtttacccga
    18481 ttggcattga gccaaaagaa atagccaaac aggctgccgg gccactgccg ccaaaactgg
    18541 cgcaacttaa agcggaactg aaaaacgtac aaaatatctt ttctgtcgaa cggctggatt
    18601 attccaaagg tttgccagag cgttttctcg cctatgaagc gttgctggaa aaatatccgc
    18661 agcatcatgg taaaattcgt tatacccaga ttgcaccaac gtcgcgtggt gatgtgcaag
    18721 cctatcagga tattcgtcat cagctcgaaa atgaagctgg acgaattaat ggtaaatacg
    18781 ggcaattagg ctggacgccg ctttattatt tgaatcagca ttttgaccgt aaattactga
    18841 tgaaaatatt ccgctactct gacgtgggct tagtgacgcc actgcgtgac gggatgaacc
    18901 tggtggcaaa agagtatgtt gccgctcagg acccagccaa tccgggcgtt cttgttcttt
    18961 cgcaatttgc gggagcggca aacgagttaa cgtcggcgtt aattgttaac ccctacgatc
    19021 gtgacgaagt tgcagctgcg ctggatcgtg cattgactat gtcgctggcg gaacgtattt
    19081 cccgtcatgc agaaatgctg gacgttatcg tgaaaaacga tattaaccac tggcaggagt
    19141 gcttcattag cgacctaaag cagatagttc cgcgaagcgc ggaaagccag cagcgcgata
    19201 aagttgctac ctttcctaag cttgcgtagg agcggttaat ctcccgtaag tggaactaac
    19261 agcacatcga cctcacttga ggcaatcact cttttcgccg agcaggatgc tcgcgaaaag
    19321 aaactgtgat tgtgattacc gcaaatcacc aaatcgaaat gatatttgcg acaaatttca
    19381 agaatatgtt cgcttaactc accgtaggca ataaacgtct tgtcaacggg ataccccgca
    19441 tcctgaatta acttatcaag aaagctttgc gttttttcct gcatcacgct gcgtaaatct
    19501 tcaagcatcg gcgcagctaa ttgattgtac atttccggat cggaagcgag agtaattaaa
    19561 ctgatgtgtc cctttactgg cctggcgata gataccgctt ttgccagcag ttgctgactt
    19621 tccggtgtaa ccgcaacagc gacaagaata ttgctatagc tcataacctg ttccttattc
    19681 tgtgaacttc aggtgacatt aaagctttac tcctaatgga gaaacgacgc aatcccaact
    19741 cggtcaaaca ggtaaatatt agtctgatta ttagtaaaga caattaatca atcactcccg
    19801 gtgatcatat aatttcaaat gtaattataa gaaaatagtg tactgattct ccgtattaaa
    19861 caagtggtta atatatgcaa aacatttcat caacattaag ttgattgttg cctttctttg
    19921 tatttaatta gtttgttgtg cggtaattgt ctgtttaaaa atagcttatc tggtattgca
    19981 tgaaagtgat tatttatagc agatgattat ttacggtgag ttattttaac tgtgcgcaac
    20041 atcccatttc gattattcct gtttcatttt tgcttgctag cgtagcgaaa aactttttaa
    20101 cagattgaaa tacacccaaa acaaaagtat gacttataca tttatgttaa gtaattgagt
    20161 gttttgtgtg atctgcatca cacattattg aaaatcgc
//
LOCUS       DAJVTL010000078        20082 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.079, whole genome shotgun sequence.
ACCESSION   DAJVTL010000078 DAJVTL010000000
VERSION     DAJVTL010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20082
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.079"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..413
                     /locus_tag="OQQ26_002697"
     CDS             <1..413
                     /locus_tag="OQQ26_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BAX inhibitor (BI)-1/YccA family protein"
                     /protein_id="HCS1858102.1"
                     /translation="PVPAIIVVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGV
                     ALVIIMNAALMSERPVWVISCLMIVLWPGIISHGRNKLLELAGKCHSEELWSPVRCAF
                     TGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH"
     gene            complement(449..1405)
                     /locus_tag="OQQ26_002698"
     CDS             complement(449..1405)
                     /locus_tag="OQQ26_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HCS1858103.1"
                     /translation="MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIR
                     DYNRVALLSAVGLVVVSYLIYGCYDLLACFYCGHKLAKRQVMLVSFICYAFNLTLSTW
                     VGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVD
                     QTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMV
                     MGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGS
                     IIAALLAYRVLYYFIPLLLALICYLLLESRAKKLRAKNEAAM"
     gene            complement(1405..2646)
                     /gene="clsB"
                     /locus_tag="OQQ26_002699"
     CDS             complement(1405..2646)
                     /gene="clsB"
                     /locus_tag="OQQ26_002699"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HCS1858104.1"
                     /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
                     DDVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLF
                     GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL
                     QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
                     ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
                     GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
                     NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPRLAQVDP
                     PAQPTMETQDRVETENTGVKP"
     gene            complement(2643..3404)
                     /locus_tag="OQQ26_002700"
     CDS             complement(2643..3404)
                     /locus_tag="OQQ26_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HCS1858105.1"
                     /translation="MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADI
                     VCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRY
                     PIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEW
                     VNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLD
                     RIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL"
     gene            3537..3947
                     /locus_tag="OQQ26_002701"
     CDS             3537..3947
                     /locus_tag="OQQ26_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhQ family protein"
                     /protein_id="HCS1858106.1"
                     /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVSVGL
                     CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
                     AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
     gene            complement(3909..5015)
                     /locus_tag="OQQ26_002702"
     CDS             complement(3909..5015)
                     /locus_tag="OQQ26_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1858107.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
                     ADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
                     LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
     gene            complement(5026..6159)
                     /locus_tag="OQQ26_002703"
     CDS             complement(5026..6159)
                     /locus_tag="OQQ26_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1858108.1"
                     /translation="MSNPILSWRRVRALCVKETRQIIRDPSSWLIAVVIPLLLLFIFG
                     YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG
                     LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
                     FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
                     TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
                     GMGLLISTITCNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
                     STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            complement(6152..7888)
                     /locus_tag="OQQ26_002704"
     CDS             complement(6152..7888)
                     /locus_tag="OQQ26_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1858109.1"
                     /translation="MNDAVITLNGLEKSFPGMDKPAVAPLDCTIHAGYVTGLVGPDGA
                     GKTTLMRMLAGLLKPDNGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD
                     DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPSETVIESKE
                     LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD
                     LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL
                     KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ
                     LIHDWDKEHSNE"
     gene            complement(7881..8876)
                     /gene="hlyD"
                     /locus_tag="OQQ26_002705"
     CDS             complement(7881..8876)
                     /gene="hlyD"
                     /locus_tag="OQQ26_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308900.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HCS1858110.1"
                     /translation="MKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTV
                     NLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKADVSVAQAQYDLMLA
                     GYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQAT
                     LKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLTAPSDGTLLTRA
                     VEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQI
                     GFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE"
     gene            complement(8879..9550)
                     /gene="cecR"
                     /locus_tag="OQQ26_002706"
     CDS             complement(8879..9550)
                     /gene="cecR"
                     /locus_tag="OQQ26_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CecR"
                     /protein_id="HCS1858111.1"
                     /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQN
                     IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA
                     CKNMIKLLTQDDTVNLSKFISREQLSPTAAYHLMHEQVISPLHSHLTRLIAAWTGCDA
                     NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL
                     SQRSL"
     gene            9779..11143
                     /gene="rhlE"
                     /locus_tag="OQQ26_002707"
     CDS             9779..11143
                     /gene="rhlE"
                     /locus_tag="OQQ26_002707"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HCS1858112.1"
                     /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
                     MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
                     QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
                     QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
                     AAAQ"
     gene            complement(11375..11857)
                     /gene="ybiA"
                     /locus_tag="OQQ26_002708"
                     /pseudo
     CDS             complement(11375..11857)
                     /gene="ybiA"
                     /locus_tag="OQQ26_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706676.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosidase YbiA"
     gene            11977..14127
                     /gene="dinG"
                     /locus_tag="OQQ26_002709"
     CDS             11977..14127
                     /gene="dinG"
                     /locus_tag="OQQ26_002709"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HCS1858113.1"
                     /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
                     EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
                     IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
                     GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE
                     VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL
                     DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
                     RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA
                     LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWH
                     SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVE
                     PSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD
                     QPRYRLVELHRKRVANGEHSVLVGLQSFAEGLDLKGELLSQVHIHKIAFPPIDSPVVI
                     TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
                     LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
     gene            14155..15117
                     /gene="ybiB"
                     /locus_tag="OQQ26_002710"
     CDS             14155..15117
                     /gene="ybiB"
                     /locus_tag="OQQ26_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
                     /protein_id="HCS1858114.1"
                     /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
                     VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA
                     ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
                     FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI
                     GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLAQAKDPETTAQ
                     WIERCFAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF"
     gene            15258..16343
                     /gene="hcxB"
                     /locus_tag="OQQ26_002711"
     CDS             15258..16343
                     /gene="hcxB"
                     /locus_tag="OQQ26_002711"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcXB"
                     /protein_id="HCS1858115.1"
                     /translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVANHLIAANLAG
                     HDSHGIGMIPSYVRSWSQGHLQINHHAKIVKEAGAAVTLDGDRAFGQVAAHEAMALGI
                     EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF
                     GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA
                     VMQESPLGSLLTFAEHKGYSLAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII
                     INPELFGTPDCSAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGS
                     WQAICDAARQIGMPEETLQAFCQQLAS"
     gene            complement(16572..16832)
                     /locus_tag="OQQ26_002712"
     CDS             complement(16572..16832)
                     /locus_tag="OQQ26_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCS1858116.1"
                     /translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG
                     ASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK"
     gene            complement(17097..17363)
                     /gene="ybiI"
                     /locus_tag="OQQ26_002713"
     CDS             complement(17097..17363)
                     /gene="ybiI"
                     /locus_tag="OQQ26_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc finger protein YbiI"
                     /protein_id="HCS1858117.1"
                     /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
                     PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR"
     gene            complement(17437..18060)
                     /gene="ybiX"
                     /locus_tag="OQQ26_002714"
     CDS             complement(17437..18060)
                     /gene="ybiX"
                     /locus_tag="OQQ26_002714"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKHD-type hydroxylase YbiX"
                     /protein_id="HCS1858118.1"
                     /translation="MMYHIPGVLSPQDVAHFREQLEQAEWVDGRVTTGAQGAQVKNNQ
                     QVDTRNALYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVR
                     SDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFMWIQSM
                     IRDDKKRAMLFELDKNIQSLKSRYGENEEILSLLNLYHNLLREWSEI"
     gene            complement(18102..>20082)
                     /locus_tag="OQQ26_002715"
     CDS             complement(18102..>20082)
                     /locus_tag="OQQ26_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="catecholate siderophore receptor Fiu"
                     /protein_id="HCS1858119.1"
                     /translation="GAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTF
                     NTEQLEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQ
                     VIGDTTAVRLNVMGEKTHDAGRDKVTNERYGVAPSVAFGLGTANRLYLNYLHVTQHNT
                     PDGGIPTIGLPGYSAPSEGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIN
                     DNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTN
                     QTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRN
                     GANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSANACGGSGRGAITCPV
                     GVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSG
                     SGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYG
                     KKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWS
                     QYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNV
                     YNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF"
BASE COUNT         4633 a         5307 c         5431 g         4711 t
ORIGIN      
        1 ctcctgtacc tgccattatc gtcgtgttca gcactgcggg cgcgatgttt ttaatcagta
       61 tgctggccgg tttattattt aatgttgatc ctggttctca ccgttttatc attatgatga
      121 cgttgacagg ggtggccctg gtgatcatca tgaatgccgc attaatgagt gaacgacccg
      181 tttgggtaat aagttgctta atgattgtgt tatggccagg cattatctcg catggacgaa
      241 ataagctcct tgaactggca ggaaaatgcc atagtgaaga gttgtggagt ccggttcgtt
      301 gcgcttttac aggtgcatta acactctatt actattttat cggcttcttt gggatacttg
      361 ccgcgatagc tataacgctt gtctggcaaa ggcatacgcg tttttttcat tagtcgtaaa
      421 tgcacatact aaagaactta actaaacttc acatcgccgc ttcatttttc gcccgcagct
      481 tcttcgcccg gctttccagt agcaggtaac agatcagcgc cagcagcagc gggataaagt
      541 aatacaggac gcgataagcg agcagggcgg cgataatgct ccctttcgag gtatgctccc
      601 cagccagtag tgcgataaac accgcttcca gcacaccgat ccccgccgga atatgcacga
      661 tgacgccagc aatactacta accagtaaca cacccagtac aaagaaatag ttcacgcttt
      721 gaccaagtaa cagccagata atcgccccca ttaccatcca gttaacgctg gaaatcagca
      781 tctgggcaag ggcgaatttc catgagggca gcaccagctt ttgccctttg atggtcatat
      841 ggcggtgctt cgcgaaagcg caaaaccaca aataaaccgc gataatcatc agtaagccaa
      901 tgccgagaat acgcagcgta gtttgatcga cataccagtg atccggcaac tccaccacgc
      961 ctgcggtaaa gataatccct gccagtaaaa tatagcccag ccagttggtg gtaatactga
     1021 gcgagaaaat ccgcgtaata gtgctaccgg gcaaccccag acgagagtac aaacgatagc
     1081 gcataccaat gccgccgacc caggtactga gtgtcaggtt gaaggcgtag cagataaacg
     1141 ataccagcat cacctggcgc ttcgccagtt tgtgaccgca gtagaagcag gcgagcaggt
     1201 catagcagcc gtaaatcaga taactgacga ccaccagccc gaccgcactg agcagcgcaa
     1261 cgcgattgta gtcgcggatg accttccaga cctcttccca gtccaccttt ttggcataga
     1321 ccaccagcaa cacaatcacc gcgataaaaa acagccaggt gaggatcttc tttgctaaac
     1381 gccagcgcgg gtgtgattta ctcatcaggg ttttaccccc gtgttttcag tttctacccg
     1441 atcctgcgtt tccattgtcg gttgtgcggg gggatcaacc tgcgccagac gtggcgtgtg
     1501 tgccggaagc cagccaacca gcgccgggaa gtggcgtaaa aagtggaacg ccagcacgct
     1561 tttagtcagg ttccaccaag tgcgtttggg cagcatggtt tcatccacct gctgacaatc
     1621 tgcggcgata atgccgttca gattatcgcg cagcgtctgg ttaaaatgac gatcgtggat
     1681 gatgacattt gcttcgagat tcagtgacaa actgagcgga tcgagattac tggaccctac
     1741 tgtcgcccag tgatcgtcca tcaatgccac tttgccgtgg agcgggcggc ggcggtactc
     1801 aaatacctga acgccgcctt taaccagata gttatacagc aagcgcgcac cgactctgac
     1861 aatcggcatg tccggttcgc cctgaatgat cagtttgatc cgcaccccgc gccgtgccgc
     1921 tttacgcaag gcgtgtaaaa atcgatagcc ggggaagaag taggcgttgg cgataatgac
     1981 ttctcgccgc gcctgagtga gcattttcag atagtgacgt tcaatatcat cgcgatgttc
     2041 ttcgttatcg cgccagacca gcaatacctg cgcttctccc ggctggcggt tctcttccgc
     2101 tttgtgatga cgtcgccacc agcgtcgtgc cgcgctctgt ccaggcaggt tttccagctc
     2161 aaactggaga atatcttcga caatcggccc ttcaaggcgt accgcgtaat cctgtttagc
     2221 ctctggaccg tagctggaca tatgctcggc ggagtaattc agcccgccaa taaaggctat
     2281 acgcgcgtcg atcaccacaa ttttgcgatg catccggcga aacacattgg tgcgcatacc
     2341 aaaaaggcga gggcggggat cgtagtagcg gaacactacg ccagctgccg tcagttcatt
     2401 gacaaactca tcgctgagat ccggcgaacc gtagccatcc agcaagactt ccgctttaac
     2461 cccgcgttgc gctgctgcca gtagtgccgc atgcagttgt ttgccgacgt catcctcaaa
     2521 ccagataaac gtttcaagaa tgatgcgttc ttgtgcctcg ccaatcgcct taaacactgc
     2581 gggataatat tgctcgccgt tttccagcaa ctggatctta ttgccttcgc gccagctaca
     2641 tttcataaat gaatctccgc acttaaaggg gcatgatcag aaaggtgtcg ccatgtccgc
     2701 agcggcaacg cggttggcgc gctggcgctg gcatttttga cgtagatcct gtccagtcgt
     2761 agtagaggaa attgcaccgg aaacgtgcgc gccgggcgtc cgtgggcgcg ggtaaaaatc
     2821 tcatccagtc cggcctgcac ttttaacgga tgattagctt tttgccgcca gtcattgaaa
     2881 tcacccgcca ccaataccgg ttcgccgtcc ggtagctcat tcacccattc ggcgagcatc
     2941 gcaagctgcg cctgacggtg cgcctcacgc aggcccagat gtacgcacat cacatgaatc
     3001 gcttttccgg tcatcggcgg cacaatgcgg cagtagagca cgccgcgctt ttccgcacca
     3061 tcgaccgaaa catcgcgatt ctcataatgt tcaatgggat aacgcgacag tacggcgttg
     3121 ccgtgatgcc cttccgggta tacggcattg cgaccgtagg caaaatcgct ccacatcgtg
     3181 tcggcgagaa actcgtagtg cgaggtatcg ggccagtttt ccacatgcag cggatgaact
     3241 tcgtgcgcgc ccatcacttc ctgcaggcaa acaatatcgg cgctgacggt acgcacggca
     3301 tcgcgaagtt ccggcaaaat gaagcgtcgg ttaaacgcgg taaagccttt gtgaatgttg
     3361 atggtgagca ccttgaacga aaattgttgt gtttgatcgg gcataatttt cctgtctttg
     3421 cctcttatct cattgaaata gtgtagtcgg cgtcacaaaa aggtgcggtc ttacggaatt
     3481 ttccgtaaag ttcggtactc tgagtaagta gagataaatt cttcaggaga gaagccatga
     3541 agtggcaaca acgtgttcgt gtcgcaacgg gtctaagttg ctggcagatt atgttgcatt
     3601 tactggtagt ggcgctgctg gtggtgggct ggatgagtaa gactctggtt cacgtcagcg
     3661 tgggattatg cgcactgtat tgtgtcacgg tagtgatgat gctggtgttt cagcgccacc
     3721 ccgagcaacg ctggcgtgag gtggcagacg tgctggaaga gctgaccacg acctggtatt
     3781 ttggcgcagc gctgattgtg ctgtggctgt tgtcccgtgt actggaaaac aactttttgc
     3841 tggcaattgc agggctggca atccttgccg gcccggcggt agtgtctttg ctggcgaaag
     3901 ataagaagtt acatcacctt acgtctaaac atcgcgtacg ccgctgaccc tgtcgtggcc
     3961 gttatcacca gtagcggcca caaactattc cacacaatat ccagactcgc atccttcaaa
     4021 taaatctgct tggtaatgtc cgtaaagtgg cgaatagggt taatccacgt caggttttgc
     4081 agccatactg gcatgttttc caccggagaa acgtaaccgg aaaggagaat ggcgggcatc
     4141 ataaaaacaa acacgccgat aaacgcctgc tgttgtgtcg agcagagtga tgaaatcaac
     4201 agaccgaatc ccaccagcga taaaccgtaa atcaccatcg taaagtagaa cagcgccagc
     4261 gatccggcga aggggatttg atacgcccag ataccaatcg ccagcacaat ggtggcctgg
     4321 aaggtggcga caattaacgc cggtacggct ttgccgatga agatctgcca ggtggtgagc
     4381 ggcgaaacca gtagctgatc gagcgtaccc tgttcacgtt cgcgggcgac ggaaagtgaa
     4441 gtgacgatca ttacgccgat agtggtgatc atggcgatca gcgacggcac cacaaaccat
     4501 ttgtagtcga gattcgggtt ataccagttg cgtaccacca gctcgctgtt gttgggtttc
     4561 ggttttcctt ccagcagctc ctgctgataa tttttgacga tctgttgcag gtagttggcg
     4621 gcaatttgcg cactgttgga gttacgcccg tcgaggatca actgcaacgg tgcggtctgg
     4681 aaggtatcca gtttgcgcga gaagtcagcc gggaaacgca ccagcagtag cgccttttgt
     4741 gtgtcgatgg tcgggcggat ctcctgtggg cttttcagca gcagcacatg tgtaaaggcg
     4801 ctggcgcggg caaaacgttg agtaagttcc accgaatgct cgccgttatc ttcatcgtag
     4861 atggcgatgg tggcgttagt cacttccagc gtggcggcga acgggaacag gatcacctga
     4921 atcagcacgg gtaaaataag aatcgcacgg gtttgcggtt cgcgcagcag cgactgcaac
     4981 tctttgcgga ttaacgtcca taagcgatga aacatgctct tctccctaat ccagccgacg
     5041 tttggttttc agccacgtca ggccgataaa catcaccgcc gaagcgatca aaaacagtac
     5101 gttcaccacc agcaccaccg gaatattccc ggcgagaaac aggctttgca gggtgctgac
     5161 gaaataacgt gcgggaataa tgtacgtcac cgcgcggatc accgcgggca tactgtcgat
     5221 ctgaaaaata aagccagaga gcataatcga cggcaggaac gcggcgttca gggcgacctg
     5281 agcggcattg aactggttgc aggtaatcgt ggaaatcagc agccccatcc ccagggtact
     5341 gagtaaaaac aggctggaga taaaaaacag aatcagcagc gaaccgcgat acggcacgcc
     5401 gagaataaac actgacacca gcatacacag caacatcgcc agcatcccga gaaagtaata
     5461 agggatcagc ttacacagca gcagttccgt gcgggtaatc tccgtagaga gcagagcctc
     5521 catggtgccg cgttcccatt ctcgcgccac caccagcgag gtgagaatcg cgccgatgac
     5581 cgtcatgata atggtcaccg cacccgggat aataaagtgc tggcttatcg ccgccgggtt
     5641 aaaccagtag cgggtttgta catcaataag tggttcaaaa gtctgcccgt tgtcctccgc
     5701 tcgctgcatt tgccagatct gccagatccc ttcgacatac ccctgtacaa agttagcggt
     5761 attcggctca ctgccgtcgg tgatcacctg aatcggtgcg gtggcgttgg cgcgctccat
     5821 ctgttccgca aaatccacgg gaataaccac cagaccgcga attttccccg cctgcatttt
     5881 ggcgatcagt tcctgacggt tatcgctgat ggtggcgtcg atgtagggcg aaccggtcat
     5941 ggtgtgggtg aaatccagcg ccgcttcgct acgctgttcc agtaaaatcc cgacccgcag
     6001 cttgctggag tcgaggttaa tgccataacc aaaaataaac agcagtagca gtgggatcac
     6061 taccgcaatc agccagctac tcggatcgcg aatgatctgc cgcgtctctt taacgcacag
     6121 cgcccgtacg cgacgccagg aaaggatcgg gttactcatt gctatgctcc ttatcccagt
     6181 cgtggatcaa ctgaataaag gcttgctcca tggtgggatc gggttgctca tcgttagccg
     6241 actgtgcttt caaatcgtcc ggcgtgccgc tggcgattaa tttcccgcgg tacaccaggc
     6301 cgatgcggtc gcaatattcc gcttcatcca taaagtgggt ggtgaccatc accgtgacgc
     6361 ctttctctac catgctgttg atgtgcagcc aaaattcacg gcgggtgagg ggatcaacgc
     6421 cggacgtcgg ttcgtcgaga aacagaatgt ccggttcatg catcagcgaa caggccagcg
     6481 ccagccgctg tttaaaacct aatggcagtt catcggtggc gtgggaggcg atacttttca
     6541 ggccgaacgc ctcgctcatg cgggagattt tttcattctg cgcccgaccg cgtaagccat
     6601 aaacaccaga gaaaaagcgt aaattctgtt cgaccgtcag gttgccgtag agcgaaaatt
     6661 tttgcgccat atagccgaga tgctggcgcg ctttcccgga actctctttc agatccatac
     6721 ccagcaccag cgcctgaccg gaagtcggca ccagcaaacc gcacatcatc ttaaaggtgg
     6781 tcgatttacc cgcgccgttt ggccccagca aaccaaaaat ctccccacgt ttaacggcaa
     6841 agttgacgtg atcggtggcg gcaaaatcac caaatttctt ggtcagttct ttcgattcga
     6901 tcaccgtctc gctgggtgtg ccttctaccg tatgtaatat tgcgcccagc ggcgattctg
     6961 aggttccggc accgcccagc aaatcaataa acgcatcttc aaaacgcggc gtagtttcgt
     7021 tgatgttgat ttccggcatc ccgtcggcat ggcgaatatc gtctggtgtg gcctcttttt
     7081 tgaggatcag acgtaccgat ttcccctgaa tcatgccgtc gctgacctgc ggcagtttca
     7141 aggcgcgttg caacagtttg cggttgccct cgtgtggact ggtcatcaga aagctgcgtc
     7201 cggccatggt ttgtgtcagg gcttttggtt ctccctgata cagcaactcg ccttcgttca
     7261 tcagtaacac gtcacggcac tgctcggctt cgtcgagata cgaggtactc cagaggatta
     7321 acatcccttc gcccgccagc tcatgcacca tctgccacag ttcgcgccgt gagatagggt
     7381 caacgccgac gccgggttca tcgagcagca acactttcgg ttcgcccacc agggtacagg
     7441 ccaggccgag tttttgtttc atcccaccgg agagcttgcc cgccaggcgt ccggtaaacg
     7501 ggccaagaga cgtaaactcc agcaggcgag caaaagtttg cttacgtgcc tcgccggtga
     7561 cgctgcgcaa atctgcgtac agattgaggt tctccatcac cgtcagatct tcatacagac
     7621 caaatttctg cggcatatag ccgagcacgg cgtgcagcgc gccgtcgttt ttgatcggat
     7681 caaagccaat caccgtggca ctgccgttgt cgggtttcag taatcccgcc agcatccgca
     7741 ttagcgtggt tttgcccgca ccgtccggcc caaccagccc cgtcacataa ccggcgtgaa
     7801 tggtacagtc gagcggcgcg acggcgggct tgtccatgcc cggaaagctt ttttccaggc
     7861 cgttcagcgt gataacggca tcattcatgt cctgcctcgt caccgaattg taccgtcacc
     7921 ggcattccct ggcgtaacgc atcatcggcg tcggtcacca caatacgcag gcgatagacg
     7981 aggtcggtac gcagatccgg cgtttcgacg gttttcgggg taaattcagc agtcggtgaa
     8041 acgaaaccaa tctgcccgtg atacggcttg tccgggcgac catcggtata aagcagcact
     8101 ttgcgccccg gctgggcctg gtcaagatta cgttcgtcaa cataggcacg tacccacacc
     8161 ggacgcgtta gtgaaacggt aaacaccgta ccaccttcat tgagaaccgt gcctggctcc
     8221 accgcgcgcg ttaacagcgt gccatcagac ggtgctgtca atgttgagtc ctgtaaattc
     8281 agctccgcct gcgccagttg cgcctgcgcc tgttcgaggc tggctttcgc ctgggcgatg
     8341 tcctgttcac ggttaccgga acggtactga cgcaatttat cctgtgctga tttcagcgtt
     8401 gcctgcgcct ggtcgcgcga ggagcgggca ttttccaggt cgtttgccga aatggtgcgg
     8461 cttttccaca acccttgctg gcggttatag aagttctgcg catagtcata ggcggcttgc
     8521 gcctgtttca ccgctgcggc ggcctgagcg atttcttcat cgcgataccc ggcaagcatc
     8581 aggtcatact gcgcctgtgc caccgaaacg tccgctttcg cctgcatcag ggcaatctca
     8641 tacggcttgt gatccagttc gcccagtacc tggcccgctt tgatcgcatc accttcgtcc
     8701 accgccagcg actcaacacg ccccccaaca cggaaactaa gattcaccgt acgaatatcc
     8761 acgttgccat acagcgtcag gccgttatcc tggcggcttt gataccacca gtagcctccg
     8821 gcaaccacgg cggcaagtac cactaccgcc agtccgatca cgacaggttt tttcatcact
     8881 acaaactcct ttgcgataat ccttgcaaaa tcaggtcgat atgacaggtc accgtctggt
     8941 tgatcagttc ggtcttttct tcatcgaacg cggtccagcc ggtacgtaac agaattgttt
     9001 ctttgccaag acgaaatgcc agaatctcac caatcaacgc atgggtatga aggatcatgc
     9061 gggtgtcatt ggcgtcgcag ccggtccagg cggcaatcag gcgtgtcagg tggctgtgta
     9121 gcggactaat cacctgttcg tgcatcaggt ggtaggctgc cgtgggagag agctgctcac
     9181 gggagataaa cttgctgagg ttgacggtgt catcctgggt gagcagctta atcatgttct
     9241 tgcaggcgcg aaggatcagt tcacggatgg cagcccgatc aggctgtggt tgcgcgaaca
     9301 agcgttcggc ttcctcggca tgcggacgga actgctcgcc aataaaatcg gcaatccact
     9361 gggcgcaggc gaggtacaaa tcttctttcg aaccgaagta gtaggtgatg gcagcgatat
     9421 tctgcccggc ctgggcggct atctcgcggg tggtggcgtt cattccatat tcaccaaact
     9481 gcgccagtgc ggcagcaatc agctgttttt tcgcctgttc acccttgatt gtcatggcag
     9541 gattattcat cgcacagtcc attcttaatc aaatgattga ttaagattat gactccatct
     9601 gggagttgtc cagtatggct aagaatttta gctacgccag tcacagggat aatttatgcg
     9661 ctgcgtcaca aaaactgcta cactccgctc cctcatgaca ttgtggtttt tgtcattttc
     9721 cttttcagta tctccctgaa aactacaccg gtaacggtcg gggcggttcg gagtagttat
     9781 gtctttcgat tctttgggtt taagccctga tatcctgcgc gccgttgccg agcagggtta
     9841 ccgtgaaccc acccctattc agcagcaggc gatccctgcg gtgctggaag gccgcgacct
     9901 gatggctagc gcccagaccg gcaccggcaa aacagcgggc tttacgctgc cgctgttgca
     9961 acacctgatc actcgccagc cgcacgccaa agggcgtcgt ccggtacgtg cgctcattct
    10021 taccccgacc cgtgaactgg cggcgcagat tggcgaaaac gtccgtgatt acagcaaata
    10081 cctgaacatt cgttcgctgg tggtgtttgg cggtgtcagc attaacccgc aaatgatgaa
    10141 gctgcgcggc ggcgttgatg ttctggtggc aacaccggga cgtttgctgg acctggaaca
    10201 tcaaaatgca gtgaagctgg atcaggttga aatcctcgtc ctcgatgaag ctgaccgcat
    10261 gctcgacatg ggctttatcc acgatatccg tcgcgtgtta acaaaattgc cagcgaagcg
    10321 ccagaacctg ctgttctccg cgaccttctc tgacgatatt aaagctctgg cggaaaaact
    10381 gttgcacaac ccgctggaaa tcgaagtggc acgccgcaat accgcgtctg atcaggtgac
    10441 ccagcacgtt cactttgtcg ataagaaacg caaacgtgaa ttgctgtcgc acatgattgg
    10501 gaaagggaac tggcagcagg tgctggtgtt tacccgtacc aaacatggcg ctaaccatct
    10561 ggctgaacag ctcaataaag atggcatccg cagtgcggcg atccacggca ataaatcgca
    10621 aggtgcgcgt actcgtgcgc tggctgattt taaatcgggc gatattcgtg tactggtggc
    10681 aactgacatc gctgcgcgcg gcctggatat tgaagagctg ccgcacgtcg tcaactatga
    10741 actgccaaac gtaccggaag attatgtcca ccgtatcggg cgtaccggtc gtgcggctgc
    10801 taccggtgaa gcgttgtcgc tggtgtgtgt tgatgaacac aaactgctgc gtgatatcga
    10861 aaaactgctg aaaaaagaga tcccgcgcat tgcgattccg ggctatgagc cggacccgtc
    10921 aatcaaagcc gaaccgatcc agaacggtcg ccagcaacgt ggcggcggcg gtcgtgggca
    10981 aggtggtggt cgcggtcaac agcaaccacg ccgtggggaa ggtggcgcaa aatctgcaag
    11041 cgcgaaacct gcagaaaaac cgtctcgccg cctcggcgat gccaaaccgg caggcgaaca
    11101 acaacgtcgc cgccgtccgc gtaaacctgc cgctgcgcag taatctttta tgccgggcta
    11161 tgcccggcat caggctgatg aacaaacgca aaactgcctg atgcgctacg cttatcaggc
    11221 ctacgtgaac tctgcaatat attgaatttg catgcttttg taggccggat aaggcgttta
    11281 cgccgcatcc ggcatttcac aacaagcact tgtcagcaat ttgagaacac gggaaaaaat
    11341 ttatctgttt taccgcccat aagccaccga gacgttactt ctctatagcc aattgttcgc
    11401 gcaactccat taaaaggtag cccagtcgat tcttgccctt accattacca ccgtctctcc
    11461 agtaagcatc gttttccgta tgctcaacca gttttgcggg cgcggttgcc agcaagagca
    11521 cacgcagttc tgcatgctgt tcgaatttag cgcgaagtgc tttacgcatc acctgttctt
    11581 taaccgactc ccagttttta cgaagtggct tggaacgatt acgccccatg cgagcggcga
    11641 ccatggggga agaaacccga cggatctctt cgcggtattt ttcatcaagg aatttttgtg
    11701 cctgaaaata gtgttcggag gtgggccagg ttttcccgtc aaccttgatg ggctaggcgg
    11761 caaagttaga aaaatcaccg tagtcatcgc tggtgctgta gaaatttatg atggtgtctt
    11821 gcatgacgtg ttggatcctt tgtgctcgaa cgggcattaa accgcattat gttggtggtt
    11881 attgcgagcc gctttccaga aacagaaaaa ccattacccc tgaaaaccga aaaatgccac
    11941 aatattggct gtttatacag tatttcaggt tttctcatgg cattaaccgc cgcgcttaaa
    12001 gcgcaaattg ctgcctggta taaggcgctt caggaacaga tccccgactt tattccccgt
    12061 gcgccgcagc ggcagatgat tgcggacgtc gccaaaacgc tggccggaga agaagggcgg
    12121 catctggcga ttgaagcccc caccggcgtt gggaaaacgc tctcctattt gatccccggc
    12181 atcgccattg cccgcgaaga gcaaaaaacg ctggtggtga gtaccgccaa cgtggcgttg
    12241 caggatcaga tttacagcaa agatttaccg ctgctgaaaa agatcattcc cgatcttaaa
    12301 ttcactgccg cttttgggcg tgggcgctac gtttgcccgc gtaatctgac ggcgctcgcc
    12361 agcactgagc ccacgcaaca ggatctgctg gcgtttcttg acgacgagct gacgccgaac
    12421 aatcaggaag agcaaaaacg ttgtgcgaag ctgaagggcg atctcgacac ttataaatgg
    12481 gatggtctgc gcgatcatac tgatatcgct atagatgacg atctctggcg tcgtttaagt
    12541 accgacaaag ccagctgcct caaccgcaac tgttactact atcgtgaatg cccgtttttt
    12601 gtcgctcgtc gggagattca ggaagcggaa gtggtggtgg caaaccatgc gctggtgatg
    12661 gcggcgatgg aaagcgaagc cgtattacct gacccgaaaa atctgctgct ggtgctggac
    12721 gaaggtcatc acctgccaga tgtggcccgg gatgcgctgg agatgagcgc cgaaatcacc
    12781 gcgccgtggt atcggctaca gctggacttg ttcacgaaac tggtcgctac ctgcatggag
    12841 cagtttcgcc cgaagaccat cccaccgctg gcgatccctg aacgtttgaa tgcgcattgt
    12901 gaagagctgt atgagcttat cgcctcgtta aacaacattc tcaatctcta catgcctgcc
    12961 gggcaggagg cagagcaccg ttttgcgatg ggcgaactgc ctgatgaagt gctggagatc
    13021 tgccagcggc tggcaaaact caccgagatg ctgcgtggtc tggcggagtt atttcttaac
    13081 gatttaagtg agaaaaccgg cagccatgac attgtacgcc tgcatcggtt gattttgcag
    13141 atgaaccgcg cgttggggat gttcgaggcg caaagcaaac tctggcggct ggcgtctctg
    13201 gcgcaatctt ccggtgctcc ggtgaccaaa tgggcgacgc gggaagagcg cgaagggcaa
    13261 ctgcatctct ggtttcactg cgtggggata cgtgtcagcg atcaactgga aaggctgctg
    13321 tggcacagta ttccgcacat tattgttacc tccgcaacct tgcgttcgct gaacagtttt
    13381 tcgcgtttgc aggagatgag cgggctgaaa gagaaagcgg gtgaccgctt tgtggcgctg
    13441 gattccccct ttaaccactg cgaacagggc aaaattgtta ttccccggat gcgcgttgag
    13501 ccttccatcg acaacgaaga gcagcatatt gccgaaatgg cggccttttt ccgtaagcag
    13561 gtggagagca aaaaacatct cggtatgttg gtactgtttg ccagcggacg ggcgatgcag
    13621 cgctttctcg actatgtgac ggatttacgt ctgatgttgc tggtgcaggg cgatcagccg
    13681 cgttatcgct tagttgaact gcaccgcaaa cgcgttgcca acggtgagca tagcgtgctg
    13741 gtgggcttac agtcatttgc cgaagggctt gatttgaaag gcgaactgct cagccaggtg
    13801 catatccaca aaatcgcttt tccgcccatc gacagccccg tggtgatcac cgaaggggaa
    13861 tggctgaaaa gcctcaaccg ctatccgttt gaggtgcaaa gcctgccgag cgcctcgttt
    13921 aacctgattc agcaggttgg gcgactgatt cgaagccacg gttgctgggg cgaagtggtt
    13981 atctacgaca aacgcttgct gacaaaaaat tatggcaagc gactactgga tgcattaccg
    14041 gtatttccga tagagcaacc ggaagtccct gaaggtatag ttaaaaagaa agaaaaaacg
    14101 aaatccccac gccgtcggcg gcgttaatga tgtgagtcag gtaaggagtc gtaaatggac
    14161 tatcgcaaaa tcattaaaga gatcgggcgc gggaaaaacc acgcgcgcga tttagaccgg
    14221 gatactgcgc gcggtctgta tgctcatatg ctcaatggtg aagtccctga ccttgagttg
    14281 ggcggcgtat tgattgcgct gcgtatcaaa ggggaagggg aagctgagat gctcggcttt
    14341 tacgaagcca tgcaaaatca caccatcaag ctgacgccgc ctgcaggcaa gccgatgccg
    14401 attgtcatcc ccagttacaa cggcgcgcgt aaacaggcca acctgacgcc gttgttggcg
    14461 attctcctgc acaaactcgg ttttcctgtg gtggttcacg gggttagcga agatccaacc
    14521 cgcgtgctga ctgaaaccat ttttgaattg atgggtatta cgccaacgtt gcacggcggg
    14581 caggcgcagg cgaagctcga cgaacatcaa ccggtgttta tgccagtcgg cgcgttttgc
    14641 ccgccgctgg aaaaacaact ggcgatgcgc tggcggatgg gcgtgcgtaa cagtgcacat
    14701 accctggcga aactggcgac gccatttgcc gaaggtgagg cgctgcgtct ttccagcgtt
    14761 tcgcatccgg aatacattgg acgcgtcgcg aagttcttta gcgatatcgg cgggcgggcg
    14821 ctactaatgc atggtactga aggtgaagtg tatgctaatc cgcagcgctg cccgcagatc
    14881 aatctcattg accgtgaagg gatgcgggtg ctgtatgaaa aacaggacac tgctggtagc
    14941 gagttactgg cacaagcaaa agatccggaa accacggcgc agtggattga gcgttgcttt
    15001 gctggcagcg aaccgattcc cgaatcgctg aaaatccaga tggcttgctg cctggtggct
    15061 acgggtgaag cggcaactat cagcgacggc ctggcgcgcg ttaatcaggc attttaattc
    15121 ttttctcagc cggatgagcc atgtcatccg gcttttaccc caccgcaata tgaaattcct
    15181 gcatctttat tgaccttccc acgcccggcg tgcagcataa aaatacaaca aacacataac
    15241 ataaacagga gttaaccatg gaaagtggtc atcgctttga tgctcagacg ctgcacagtt
    15301 ttattcaggc tgtatttcgt cagatgggta gcgaggaaca agaagcgaaa ttagttgcca
    15361 atcatttaat cgcggcaaac ctggcagggc atgattctca tggtattggc atgatcccaa
    15421 gctatgtgcg ttcctggagt caggggcatc tgcaaattaa ccatcatgcc aaaatcgtta
    15481 aagaggcggg ggcggcggtc acgctcgatg gcgatcgcgc attcggtcag gtcgcggcac
    15541 acgaagcgat ggcgctgggg attgagaaag cgcatcagca cggtattgct gccgtggcgc
    15601 tacataactc gcatcatatc ggccgtatcg gttactgggc ggagcagtgt gcagcggcgg
    15661 ggtttgtctc tatccacttt gttagcgtgg tcggtattcc aatggtcgcg ccgttccacg
    15721 gtcgcgacag ccgctttggc accaatccct tctgtgtggt tttccctcgt aaagataatt
    15781 tcccgctgtt gcttgattac gccaccagcg ccattgcatt tggcaaaacc cgcgtcgcct
    15841 ggcataaagg cgtccccgtg ccgccaggtt gcctgattga cgttaacggc gtgccgacga
    15901 ccaatccggc ggtaatgcag gagtcgccgt tgggttcgct gttgaccttt gctgaacata
    15961 aaggctactc ccttgcagcg atgtgtgaaa ttcttggcgg ggcgctttcc ggcggtaaaa
    16021 cgacgcatca ggaaacgtta caaaccagtc ccgatgccat tcttaactgc atgaccacta
    16081 tcatcatcaa cccggaactg ttcggcacgc cggattgtag cgcgcagacc gaagcctttg
    16141 ccgagtgggt gaaagcctcg ccgcatgatg acgataagcc gattttgcta ccgggcgagt
    16201 gggaagtgaa cacgcgtcgc gaacggcagg agcaggggat tccattggat gcgggaagct
    16261 ggcaggccat ttgtgatgcg gcgcggcaga ttggtatgcc ggaagagacg ttgcaggctt
    16321 tctgtcagca gttagccagc taaaaaaaag cccgtccagt ggcggacggg caaacaaggg
    16381 taacatagga tcaatgaggg ttagagcata tgcgtctgtc ggcaaacaga cagggaaata
    16441 cttgtgctgg acgtagcgta accgcctgat ccgtccaacg gttcggattt tgtaggcctg
    16501 ataagacgcg gtagcgtcgc atcaggcatc tgttaccgga tgcggcgtaa acgccttatc
    16561 cgtcctacga attacttata aattaccgca gtaccgctta atttattgtt gttggtggcg
    16621 gaagtgatgc tgtatccact ggcaccggct gccgccgctt tctcagccag tttcgcttcc
    16681 agggcatcga gggtggatgc gccatcggca gaaaccacgc cgattttatt catgttctgt
    16741 gcctgggatg ccgttaccgg ttccgccgcg aacacgccaa atgacagagt tgaaagagcc
    16801 atagcagcaa caacagtatt gatagttttc ataattaatc tctcgcaggt gatttttgta
    16861 taagtgacgt tgtttcgtcg atgtgatgag tatcacgttt ttttacgaga gataaaatcg
    16921 aagagaattg accgccttgt tcaaataaat tgattgatat ctaacatact gataaaccat
    16981 ttatttgttg tacttatgga cttgttttat gccgcgtggc agtcacagca gcgttaaagg
    17041 cacggaatgc cacgcaaaat acaaattata ctcgctatgc atctcgccag ttgtagttaa
    17101 cgtaactggc tgtctttcga acctctgcga ttatatcctg tatacgctgg tttttgtaaa
    17161 tctttctcct gctgacaatg aatacataag cgcacgccag gaatggcttc ccgacgggct
    17221 tgcgggatgg gggcaccgca ctcttcacat tcatacaggc tttcgccacg cggaatttca
    17281 ccccgagcgc gggcaatcgc atcttcaatt gtactgttga tctgttcgtt gacggcgtca
    17341 tcgttagccc aaccggatgc catatcgtcc tccccatatc aatgcttgta cagttaagtg
    17401 tagctaatat agggacgaac ctgggcagtt caagcgtcag atctccgacc attcccgcag
    17461 cagattatga taaagattga gcagcgacag gatctcttca ttttcaccat agcggctttt
    17521 cagcgactga atatttttgt ccagttcaaa cagcatggcg cgctttttat catcgcggat
    17581 catcgactgg atccacataa atgatgccac tcgtacgccg cgggttacgg gtgtcacgca
    17641 atgcaggctg ctggagggat acaacaccag atcacctgcc gggagtttta cccgatgttg
    17701 tccgaaggtg tcattaacga ccagttcgcc gccgtcgtag ctttgtggat cgctgcgtac
    17761 tgcgccatcc acatggaaac cataggtttc attgttctga tagcgattaa acagcggcgt
    17821 ggaaagggta cgtggcaagg cagcggcaaa gaacaatgca tgttggttaa ccgcgttcag
    17881 cacctcattt tgcagtgcgg cgtataacgc gttgcgggtg tctacttgct gattgttctt
    17941 aacttgtgca ccttgtgctc cggtggtgac gcgtccatcc acccattcgg cttgttccag
    18001 ttgttcgcga aaatgggcga cgtcctgtgg cgataacacg ccgggaatgt ggtacatcat
    18061 acaagttctc caaaaagtgg ggcctgcgcc ccacatctga atcagaaatg catattggct
    18121 gtgagcaaga aggttcttgg ctcgcccggg tgataacggt agccgctctt gttgattgag
    18181 gcgacgtaat cggtatcaaa caggttgtaa acgtttagct ggaagtcgag attgcgatta
    18241 acccgatacc ccagtttggc atcggcgacc cagtaacctt ctgtaaatgc tggcgttccc
    18301 accgcgccgt ctgaaccttt atgcatactg ccgatatagc gtgcgcccgc gccaacagag
    18361 atatcatcgg ttgcctgata ttggctccat aaggtgaagg cgtgctccgg ggtatacggc
    18421 agcgatgagg aaccatcctg ggcaacatct ttgccgtttt tgatggttgc tttttgctgg
    18481 gtatagccgc caatcacctg ccacgcggga gtgatattcc ctgccacgga tatctcatag
    18541 ccttcgacgc gtttcttacc gtattgcgag taagtcccgt catcattttg ctcaacttca
    18601 ttttcgatat cagtacggaa cagcgcggcg gtgagcaaca ggcgtttatc cagaacctgc
    18661 catttggtgc caatctcgct ggtgttggct ttttgcggtt taaaatcggt gcggttggca
    18721 ctgttaccgc tgccagactg cgcaagggcg aagttgttgc cgcccggagg ctgctgggaa
    18781 acggcatagt taatatagac attgccgttt tccgtcaggt gatacagcgc cccggctttc
    18841 cagttcacca gattgcccga cttggcggtg tcgacggtgg tgaccggaga accttttgcc
    18901 acaccaactg ggcaggtgat ggcaccgcgt ccgctgccgc cgcaggcgtt ggcactgtca
    18961 tattcagtat gataattatc cagacggatc ccgccgttca actcaaaatc acgggtgatt
    19021 tgcagcgtat cgaaggcgta aattgcgaag gtatccgtct gaccattggc gtttgcgccg
    19081 ttgcgcgtca ggccgccggg atgaatgctg ctgtcaggat gataaatatt taccgccggt
    19141 aacgtcaccg gattaacgcc gtagttagtc tgcgtttcac gggtaaattc cacgccggta
    19201 ctgacatcat gaccgataga accggtatag aacgtcgagg ttaggttggt ctggttggtg
    19261 agaattttat tactcacatc tttggtattc gccgtgcgtg accaggtcca gctattcaca
    19321 tcgctggtgg gctgggtaat attcgacgcc ccacccataa tcgccgtcat caggtaatcc
    19381 tgcttcacgc gcgaccaacg ggtagtattg cgaatggtgg tgttatcgtt gatgtcgtgc
    19441 tcaaaacgca tggtagcggt gtcggtggtc gaatcgtcgt aatcggaatc cgtgccgtaa
    19501 aagttatgag tatcaacttt tccggaatga ttcagagccg ctgttccctc agatggggca
    19561 gaatagcccg gcaaaccgat ggtcggaatg ccgccgtctg gcgtgttgtg ctgggtgaca
    19621 tgcagataat taagatacaa acgattcgct gtaccaaggc caaaagcgac agaaggggcg
    19681 acgccgtaac gctcatttgt gactttgtcg cgtccggcat cgtgcgtttt ttcgcccatt
    19741 acattcaggc gcaccgcggt ggtatcacca atgacctgat tgacgtccag cgtgccgcgg
    19801 cggaaccagg cgctgccaat actggcggag gcgtcaatgc cggaatcatt gcgcggctgt
    19861 ttgctgatca tattgatcga gcccgtcggt gcgctgcgcc cgtagtcggt gccggacggc
    19921 cctttaatca cttcgagctg ctcggtattg aaggtgtcgc gcgagacgct gccgatatcg
    19981 cgaataccat caatataaat actgttagag gtatcggcac cacgcatata aatggcgtcg
    20041 ccagtggtgg agttaccgtt ctcacccgca aaaaacgcac cc
//
LOCUS       DAJVTL010000079        19859 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.080, whole genome shotgun sequence.
ACCESSION   DAJVTL010000079 DAJVTL010000000
VERSION     DAJVTL010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19859
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.080"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(82..1362)
                     /gene="puuB"
                     /locus_tag="OQQ26_002716"
     CDS             complement(82..1362)
                     /gene="puuB"
                     /locus_tag="OQQ26_002716"
                     /EC_number="1.4.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylputrescine oxidase"
                     /protein_id="HCS1858120.1"
                     /translation="MTEHTSSYYAASANKYAPFDTLNESITCDVCVVGGGYTGLSSAL
                     HLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFE
                     GGEIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAI
                     RREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVV
                     RTANGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNY
                     CVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDY
                     RWTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAF
                     ANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV"
     gene            complement(1364..2851)
                     /gene="puuC"
                     /locus_tag="OQQ26_002717"
     CDS             complement(1364..2851)
                     /gene="puuC"
                     /locus_tag="OQQ26_002717"
                     /EC_number="1.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase PuuC"
                     /protein_id="HCS1858121.1"
                     /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
                     QAPLAKIARGKSVDIDHAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
                     LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
                     IAAIVPWNFPLLLTCWKLGPALAAGNSVVLKPSEKSPLSAIRLAGLAKEAGLPDGVLN
                     VVTGFGHEAGQALSRHDDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV
                     FADCPDLQKAVSATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
                     LDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAELAAAIGPTIFVDVDPNAS
                     LSREEIFGPVLVVTRFTSEDQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVF
                     VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
     gene            complement(3001..3558)
                     /gene="puuR"
                     /locus_tag="OQQ26_002718"
     CDS             complement(3001..3558)
                     /gene="puuR"
                     /locus_tag="OQQ26_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001464354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator PuuR"
                     /protein_id="HCS1858122.1"
                     /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
                     VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
                     PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEVVLTINGQDYHLVAGQSYAINT
                     GIPHSFSNTSAGICRIISAHTPTTF"
     gene            complement(3585..4349)
                     /gene="puuD"
                     /locus_tag="OQQ26_002719"
     CDS             complement(3585..4349)
                     /gene="puuD"
                     /locus_tag="OQQ26_002719"
                     /EC_number="3.5.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
                     /protein_id="HCS1858123.1"
                     /translation="MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIA
                     LPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINA
                     ALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQ
                     VEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALG
                     VQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL"
     gene            4561..5979
                     /gene="puuA"
                     /locus_tag="OQQ26_002720"
     CDS             4561..5979
                     /gene="puuA"
                     /locus_tag="OQQ26_002720"
                     /EC_number="6.3.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-putrescine ligase"
                     /protein_id="HCS1858124.1"
                     /translation="METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLL
                     TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP
                     VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
                     EFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP
                     ADGAVAEASPGQFEINLYHTDNVLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEH
                     AGSGMHIHISMQNNRGENVLSDAEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR
                     FQPGMYVLTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGIFH
                     GLDNELPLQEEVEGNGLEQDGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
                     DELLQFERLITETEIEWMLKNA"
     gene            6128..6292
                     /locus_tag="OQQ26_002721"
     CDS             6128..6292
                     /locus_tag="OQQ26_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858125.1"
                     /translation="MPMIKSPHGEGGCVCAPPATDWTPSPLLPLLNRFDFRSTRPQTL
                     LRRGGSNYGY"
     gene            6282..7667
                     /gene="puuP"
                     /locus_tag="OQQ26_002722"
     CDS             6282..7667
                     /gene="puuP"
                     /locus_tag="OQQ26_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PuuP"
                     /protein_id="HCS1858126.1"
                     /translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF
                     GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMV
                     GWSSLLDYLFLPMINVLLAKIDLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFN
                     TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF
                     LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA
                     LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH
                     PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVALTFVNLSVFNHFWRRKGMN
                     KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL
                     YDGDRTPVSET"
     gene            7801..8046
                     /locus_tag="OQQ26_002723"
     CDS             7801..8046
                     /locus_tag="OQQ26_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmjA family protein"
                     /protein_id="HCS1858127.1"
                     /translation="MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLM
                     NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
     gene            8359..10002
                     /gene="sapA"
                     /locus_tag="OQQ26_002724"
     CDS             8359..10002
                     /gene="sapA"
                     /locus_tag="OQQ26_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HCS1858128.1"
                     /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDNGFVYCVSGQV
                     NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
                     DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSV
                     RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
                     QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
                     QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
                     TAETAASILPRASWAYDNEAKITEYNPAKSREQLKALGLENLTLKLWVPTRSQAWNPS
                     PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
                     LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
                     SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
     gene            9999..10964
                     /gene="sapB"
                     /locus_tag="OQQ26_002725"
     CDS             9999..10964
                     /gene="sapB"
                     /locus_tag="OQQ26_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HCS1858129.1"
                     /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT
                     RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFALLYEVKPITGFA
                     LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
                     RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
     gene            10951..11841
                     /gene="sapC"
                     /locus_tag="OQQ26_002726"
     CDS             10951..11841
                     /gene="sapC"
                     /locus_tag="OQQ26_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HCS1858130.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
                     FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
                     AMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
                     VLLVNLLGDGVRRAIIAGVE"
     gene            11841..12833
                     /gene="sapD"
                     /locus_tag="OQQ26_002727"
     CDS             11841..12833
                     /gene="sapD"
                     /locus_tag="OQQ26_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HCS1858131.1"
                     /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
                     GKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
     gene            12835..13641
                     /gene="sapF"
                     /locus_tag="OQQ26_002728"
     CDS             12835..13641
                     /gene="sapF"
                     /locus_tag="OQQ26_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HCS1858132.1"
                     /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
     gene            13709..14062
                     /locus_tag="OQQ26_002729"
     CDS             13709..14062
                     /locus_tag="OQQ26_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HCS1858133.1"
                     /translation="MMDKIKSNARDLRRNLTLQKRKLWRYLRSRRFGDFKFRRQHPVG
                     SYILDFACCSARVVVELDGGQHDLAVAYDTRRTSWLESQGWTVLRFWNNEIDCNEETV
                     LENILQELNRRSPSP"
     gene            14440..15228
                     /gene="fabI"
                     /locus_tag="OQQ26_002730"
     CDS             14440..15228
                     /gene="fabI"
                     /locus_tag="OQQ26_002730"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HCS1858134.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
     gene            15373..16500
                     /locus_tag="OQQ26_002731"
     CDS             15373..16500
                     /locus_tag="OQQ26_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309887.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain-containing protein"
                     /protein_id="HCS1858135.1"
                     /translation="MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVI
                     LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
                     NYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC
                     VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEV
                     EKLPEEYTKSSTAELCQLAETHSLHPISLSLLERLLNSTRVNTQPDNQLAALLCARIN
                     GSPACFAACMDSSNEYKKISTLLRKGENEINQWADRHSVERATVQAIQWLTRAPDRFS
                     AAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY"
     gene            16568..18502
                     /gene="rnb"
                     /locus_tag="OQQ26_002732"
     CDS             16568..18502
                     /gene="rnb"
                     /locus_tag="OQQ26_002732"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HCS1858136.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD
                     HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
                     WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP
                     DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGNWQPESEAIA
                     EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
                     MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
                     KLRRELDAQPTGFLDSRIRRFQSFAEIGTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTGTRFAA
                     EIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPVA"
     gene            18666..>19859
                     /locus_tag="OQQ26_002733"
     CDS             18666..>19859
                     /locus_tag="OQQ26_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1858137.1"
                     /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL
                     QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV
                     ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF
                     MSRREAAASRRNNRVFFRSGNAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLIC
                     SGTDITEERRAQERLRILANTDSITGLPNRNAMQELIDHAINQADNNKVGVVYLDLDN
                     FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA
                     SRILTRLRLPFRIGLIEVYTSCSVGISLSPEHGSDSATIIRHADTAMYTAKEGGRGQF
                     CVFTPE"
BASE COUNT         4488 a         5201 c         5242 g         4928 t
ORIGIN      
        1 ggggtggcag aaagacgacg ctgatggaat tcattgttgc tcatgtttca caccttttga
       61 ctcttcactg ttaatcggaa attaaacgcc cagacgatcg cgcaggctgt aataagccgc
      121 gcccatcgcg gtaaatggca cgcgcagcgt gcgcccgccg gggaacgggt aatgcggcag
      181 attggcgaag gcatcgaaac gctcggcgtc accgcgcagc agttcagcaa tcaaacgccc
      241 ggcaagatgg gtacaggtga cgccgtggcc gctgtaaccc tgcatgtaat agatgttggt
      301 atcaaggcgg ccgaactgcg gcatgcgcga caaggtcagc aggaagttgc ccgtccagcg
      361 gtaatcaatt ttcacgccct tcaactgagg gaaggttttt agcagtttcg gtaccacaag
      421 acgctcaacg tcatccgggt cgcgtgcacc atacactaca cccccgccgt acagcaggcg
      481 gttgtcggcg gtaagacggt agtaatcaag cagatagtta cagtcttcca cacagtagtt
      541 tttcgggatc agcgaacggg ctaaatcttc cgacagccgt tcggtggtga tcacctgcgt
      601 gccgcacggc atgctgcgtt tcgctagttc cggctctact ttatcgccca gatacgcatt
      661 cccggcgaca atcacatact tcgccgtcac ctgaccattg gcagtccgaa ccacggctgg
      721 cgtggtgtgc tggatctgcg tcacggcgga aagctcatac acgcgcccgc cgttcaggcg
      781 gatggcatcg gcttcaccaa tggcgaggtt tagcgggtga atatgcccac cgctgtgatc
      841 cagcagcgca ccagtgtagc gatcgctggc gacctcgcgg cgaatagcgt tggcgtccag
      901 cagctccagc tgtttattgc cgtagcgttc ccagttctct ttctgctctt cgagtgtggc
      961 gagttgttta tcattcatcg ccacaaacag accgccgggg cggtagtcgc agtcaatctg
     1021 ataacgtttg atacgttcgc ggatgatctc gccaccctca aacatcatgc tgccgagcat
     1081 acgggcggta tccatgccgt agcttttttc gatcacgtcg atgtcgcggc tgtaggagtt
     1141 cacaagctgc ccgccattgc gtccgcttgc gccgaagccg atgcgtgagg cctcaagaac
     1201 caccacgtca aagcccgctt ctgccagatg cagcgcggag gaaagcccag tatagccgcc
     1261 gccgaccacg caaacatcac aggtgattga ctcattcagt gtgtcgaatg gtgcatattt
     1321 attcgcactg gcggcgtagt aactgctggt atgttcggtc atttcaggcc tccaggctta
     1381 tccagatggt tttcagttca gtgaattttt caagggcatg cagggatttg tcgcgaccgt
     1441 tgccgctctg cttatagccg ccaaacggca cggtcatatc gccgtcgttg tagttattga
     1501 cgaagacgga accggctttc aggcggcggc tcatacggtg cgcgcgggag aggtcgcgcg
     1561 tccacaccgc cgcgccaagg ccgtactggc tgtcgttggc aagctgtagc gcctggtctt
     1621 ctgatgtgaa acgcgtgacc accagcaccg gaccgaaaat ctcttcgcgg cttaaggacg
     1681 cattcgggtc cacatccaca aagatggtcg ggccgatggc ggcagccagc tcagcgttac
     1741 gaccatccag cagcagttgc cctttgcttt ctccttcccg aataaagcta tggaccgagt
     1801 cggcgtgggc gcaatcgatt aaggtgccca tggtggttgc gggatcaagt ggatggcccg
     1861 gctgccagtt ttgcgcctgc tgttttaaca gggctaagaa ttcatcggcg atgctctctt
     1921 ccagcaacag gcgcgttccg gcgatacaca cctgcccctg gttgtagaaa atgcccgcag
     1981 cggtggcgct cactgctttt tgcagatccg ggcagtcggc aaaaacgatg ttggcgcttt
     2041 tgccaccggc ttccagccag acgcgtttca tgttgctgtc gcctgcgtct ttcagcagtt
     2101 gtttcccggt acgggtcgag ccggtgaagg cgatggcgtc gatatcgtca tggcgtgaca
     2161 gcgcctgccc cgcttcatga ccaaaacccg tcaccacgtt caacacacca tccggcaagc
     2221 ctgcttcttt cgccagcccg gcgagacgaa tcgcactgag cggtgatttt tcagacggtt
     2281 tcaggacaac gctgttccct gccgccagcg ccgggccgag tttccagcaa gtcagcagca
     2341 gcgggaagtt ccacggcacg atggcggcaa tcacgccgac cggttcacgc acgatcatcg
     2401 ccagctcatg gctactggtg gtcgccactt cgccatacac tttgtcgatc gcttcggcgt
     2461 accagcgaat ggcgcgcgcc gcgccgggaa tatcatcacg cagactgtga cgaatcggtt
     2521 tgccggtgtc gagagtttcc agcagtgcca gctcttcggc gtgggcttcc attaaatcgg
     2581 cgagtttatt cagtaccgct ttacgtttag ccggagaaga gagtgaccag tcgccgcgtt
     2641 caaatacgcc gcgtgctgcg ctcaccgcat ggtcgatatc gacgctcttg ccgcgggcaa
     2701 ttttcgccag cggtgcctgg gtgaccggat caacggtttc aaaggtttca ttttccgccg
     2761 cagcagtata ttcaccgtta ataaataagc ggttttcaat ggcgagactt aacgctttat
     2821 cctgccagta agccagatga tgaaaattca ttatgactcc tgtttcacgt ctatcagata
     2881 tatgcagttt gtgaacgtca gggcgcagag atccccgggc cgcatgcccg tttatttctg
     2941 gcgacattct ttatggattg ccgggcgcat tgcgcttacc cggcttacag aacaaaaaga
     3001 ttaaaacgtg gtgggcgtat gggcgctgat aattcggcaa atacctgccg acgtattact
     3061 gaaactgtgc gggatgccgg tattaatggc ataactttgc cccgcgacga gatgataatc
     3121 ctgaccatta atcgtcagaa caacttcacc ttccagtaca gtgcctattt cctcaccctg
     3181 atgcttaatt ctttccccag tggttgtgcc cggctggtac gtttcaaaga tcatcgccag
     3241 cgtgcgattc gggttaccgt tatgaaccag cttcattgac acaccctgac tgcccatctc
     3301 aattaagtcg tcctgattaa tgacgacctg cggctcatca ggtttttccg gctcggaaaa
     3361 gaattccgag agtgacagac catacacctt cagcagcttt tgcagcgtac tgatggcagg
     3421 gctgacttta tcttgttcta tcgtactgat agcactgtga gtcagcccgg agagttcggc
     3481 ggcacgacgt tgtgaaagcc cctgctgctg gcggatttcc gacaagcgtt ttcctggcgc
     3541 cagtccctca tcactcatat ttgcatttcc ttaaactgta gtggtcagag tcgctgtttt
     3601 tcagcgatat ggtgctgaca agcggtgata aagccctcga acaatatacg cgaaagcgcg
     3661 tactcgctac tgttccattc cgggtgccac tgtacgccca gcgcaaaagg atgattgatg
     3721 acgctaaccg cctcaactaa gccatccggc gagcgagctt caacacgcaa ccgtgggcta
     3781 acgaccttcg ccccttgtcc atgcagagag tttacccaaa agttgctaca ttcaggtaac
     3841 aacgcagaca gtaatccccc ctcttcaacc tgaacttcat gcgacggtgc atattgctgt
     3901 tccaccggca gttcgggatc ttcccgatgt tccagcaatt caggctgttc gcacagcttg
     3961 cgatgcaacg aaccaccggt tgccaccacc agttcctgta aaccccggca gatggcgaaa
     4021 atggggatgc gcctttcgag tgcggcatta attaacgcca tgctcagaag atcacgcccg
     4081 ggatcggcgt caggctcatc gccgttttca ccatataggt gcggctgcac attgctggga
     4141 ctaccaggaa gataaatgcc atcgagtttc ggcaaaagtt gttcaagtaa cgacggttcc
     4201 gccagcgcat gtggtagcgc aattggcaag ccgcctgcgt ggatgatggc attcaggtac
     4261 ttttcttgca gagtctgggt cgcatgaccc ttaagcctgt tcctgcacat tacgacaccg
     4321 ataaccggat tgttcattat attttccatg ctcaatctca caaagtggac taaattatcg
     4381 ccattactgc ggtttaaatg acctttatgt tcaatatttt ttcaatctag cagtgtattt
     4441 tcatttttgc gaactcaatt taacatttga caaacattta gtttgcatac agattcgaat
     4501 ggtggtcatt atattttaca ctttgataac gagcggaaaa caaaccaaag gcgaagaatc
     4561 atggaaacca atatcgttga agtagagaac tttgttcagc agtcagaaga gaggcggggt
     4621 agcgccttta cgcaggaagt gaaacgctac ctggagcgct acccgaatac gcaatatgtt
     4681 gatgttttac ttaccgattt gaatggttgc ttccgtggaa aacgtatccc tgtatcaagc
     4741 ctgaagaagt tggagaaagg gtgttacttc ccggcctcgg tgtttgcaat ggatattctg
     4801 ggcaacgtag tagaagaagc aggtctgggt caggaaatgg gcgagccgga tcgtacctgt
     4861 gttcctgttc tcggttcctt aaccccttct gccgccgatc cagagtttat cggtcagatg
     4921 ctcctgacca tggtcgatga agatggcgct ccctttgacg ttgagccgcg gaacgttctt
     4981 aaccgcctgt ggcagcagct gcgccagcgc ggattgttcc cggtcgtagc ggtagagctg
     5041 gagttctatt tactggatcg ccagcgcgac gctgaagggt atctgcaacc gccctgcgcg
     5101 cccggcaccg atgaccgcaa tacacaaagc caggtttact ccgttgataa cctcaaccac
     5161 ttcgccgacg tgctcaatga tattgatgag ctggcgcagt tacagctgat tccggcagat
     5221 ggcgcggtcg ccgaggcctc gccgggtcag tttgaaatca acctttacca tactgataac
     5281 gtgctggaag cttgcgatga tgcgttggca ctaaaacgcc tggtgcgtct gatggcagaa
     5341 aagcataaga tgcacgccac ttttatggcg aagccgtatg aagagcacgc gggcagcgga
     5401 atgcatatcc atatcagtat gcaaaataac cgtggcgaga acgtgctttc tgacgcggaa
     5461 ggcgaagatt cgccgctgct gaaaaagatg ctcgccggga tgattgacct gatgccgtca
     5521 tcaatggcgt tgctggcacc aaacgtgaac tcgtatcgcc gcttccagcc gggaatgtat
     5581 gtgctgacgc aggcgtcgtg gggccataac aaccgcaccg tcgccctgcg tattccgtgc
     5641 ggcgatcgtc acaatcaccg cgtggaatat cgcgtggcgg gtgcagatgc caacccatat
     5701 ctggtgatgg cagcgatttt tgccggtatt tttcacggtc ttgataacga gctgccgttg
     5761 caggaagaag tcgaaggcaa cgggctggaa caggatggct tacccttccc gattcgccag
     5821 agcgatgccc tgggtgagtt tatcgagaat gatcacctgc gccgctattt aggcgaacgg
     5881 ttttgccatg tgtatcacgc ctgtaaaaat gatgagctgt tgcagtttga gcgcctcatc
     5941 acagaaacag aaattgagtg gatgttgaaa aacgcatagt accccttgcg gggttgtttc
     6001 atcggcctga gcggagccag gcctgacatt tgctggtaat ccagacattt cccggatgtc
     6061 gcgttatgga gcgcaggcgg caacgggctt ccgttaacga ttaagactgt gacgaggaaa
     6121 tgagatgatg ccgatgatta aatccccgca tggcgaggga ggctgcgtat gcgcccctcc
     6181 tgctactgac tggactccgt cccctttgct tcccttgcta aacaggtttg atttcaggtc
     6241 gacacgaccg caaaccttat tacgcagggg aggcagcaat tatggctatt aattcaccac
     6301 tgaatattgc tgcgcaaccc ggcaaaaccc gtctgcgaaa atcactgaaa ttgtggcagg
     6361 tggtgatgat gggtctggcc tatctcacgc cgatgaccgt atttgatact tttggtattg
     6421 tctccggcat tagcgacggt cacgttccgg cgtcctattt gctggcgctg gcgggcgtgc
     6481 tgtttaccgc tatcagctac ggcaaactgg ttcgccagtt tccggaggcc ggttcggcct
     6541 atacctacgc gcaaaagtcg attaacccgc acgtcggatt tatggtcggc tggtcatcgc
     6601 tgctggatta tctctttttg ccgatgatca acgtcttgtt ggcgaaaatc gatctctccg
     6661 ccctcttccc ggaagtgccg ccgtgggtgt gggtagtaac cttcgtcgcc attttaaccg
     6721 ccgcgaatct gaagagcgtc aacctggtcg ctaacttcaa taccctgttt gtactggtgc
     6781 aaatctccat catggtggtg tttatcttct tggtagttca gggactgcat aaaggagaag
     6841 gcgttggcac cgtctggtca cttcagccgt ttatcagcga gaacgcgcac ctgatcccga
     6901 ttattaccgg ggcgacgatt gtctgtttct ccttcctcgg tttcgatgcg gtgaccacgc
     6961 tttcggaaga gacgccggac gccgcacgcg tgatcccgaa agccatcttc ctgacggcgg
     7021 tctacggtgg cgttatcttt atcgcggcgt cgttctttat gcaactgttc tttcccgata
     7081 tcagccgctt taaagatccg gatgccgcac tgcctgaaat tgcgctgtac gtcggcggca
     7141 agctcttcca gtcgattttc ctctgcacca cgtttgtgaa cacgttagcc tctggcctgg
     7201 cttcacatgc aagcgtgtcg cgtctgctgt atgtgatggg gcgtgacaat gtgtttccgg
     7261 agcgcgtgtt tggctatgtg cacccaaaat ggcggactcc ggcactcaac gtcattatgg
     7321 tcgggattgt cgcgttgtcg gcgctgttct tcgatttagt taccgccaca gcgttaatta
     7381 acttcggtgc tctggtggcg ttaaccttcg tgaatctgtc ggtgtttaat catttctggc
     7441 ggcgtaaagg aatgaataaa agctggaagg atcacttcca ctatttgctg atgccgctgg
     7501 ttggcgcgct gacggtgggt gtgctgtggg ttaacctcga gtcaacgtca ctgacactcg
     7561 gtctggtatg ggcttcgtta ggcggcgcat atttatggta tctgatccgc cgctatcgca
     7621 aagtgccgtt gtatgatggt gacagaacgc cggtgagtga aacgtaatag tcggatgcgc
     7681 ggcgcattat cctgcctgag ggtaatgcac cgcgccatta actataaaaa gatgtatgac
     7741 ccggatcacg agtgctatca tccgccctta tgcttagcgc attaacccca ggggcaaata
     7801 atgaaccacg atatcccgct aaaatatttt gatattgccg atgagtacgc gaccgaatgc
     7861 gcagagcctg tcgcagacgc tgaacgcaca ccgctggccc actacttcca gttactgctc
     7921 acccgtttga tgaacaatga agagatcagc gaagaagccc aacatgaaat ggctgctgaa
     7981 gcggggatta atcccgtacg cattgatgag atcgcagagt ttttgaatca atggggtaat
     8041 gagtaattat ttaattgcag acgatcggtc agtatcgttg tccggataaa gcgttcacgc
     8101 cgcatccggc taacaatgac acgcactgca gcgtgcttta atgggtttct cacgatcgta
     8161 ccgctctgct cctcgctaag ttgttctgtg agttatagtt atagagaaat cacgggtacg
     8221 aatgttgaac agatggcgac gccacctgtt caacgaccaa ccacacggcc ctcattacgc
     8281 cccctgaaca caaacggtaa tggcaaatgt cattaaatat tagtaagata gcctctttac
     8341 ataaaatccc ttaatattat gcgccaggta ttatcgtctc ttttggtgat tgctggactt
     8401 gtgagtggtc aggcaatcgc cgcgcctgaa tcccccccgc atgctgatat ccgcgacaac
     8461 ggttttgtct attgcgtcag cgggcaagtc aacaccttta acccatccaa agcgagcagt
     8521 gggttaattg tcgataccct tgccgcccag ttttatgatc gactgctgga tgtcgatccc
     8581 tatacctatc gcctgatgcc ggaacttgcc gaaagctggg aagtactcga caacggagcg
     8641 acctatcgct tccacctgcg tcgcgatgtt ccgtttcaaa aaactgactg gtttactccc
     8701 actcgtaaaa tgaatgccga cgatgtggtg tttaccttcc agcgaatttt tgaccgcaac
     8761 aacccgtggc ataacgtcaa cggcagcaac ttcccctact tcgacagtct gcaatttgcc
     8821 gataacgtga aaagcgtccg taaactggat aatcataccg ttgagttccg tctggcccag
     8881 ccggatgctt cttttttgtg gcacctcgca acccattatg cttcggtcat gtcggcagaa
     8941 tatgcccgga agttagagaa agaagatcgc caggagcaac tcgaccgtca accggtcggc
     9001 actgggccat atcagttgtc ggaataccgc gccgggcaat ttattcgcct acaacgtcat
     9061 gatgacttct ggcgcggtaa accgttaatg ccgcaggtgg tggtggattt aggctccggc
     9121 ggcaccggac gtctgtcgaa actcctgaca ggggagtgcg acgttctggc ctggcctgct
     9181 gccagccagc tatccatttt gcgtgacgac ccgcgcttgc gtttaacgct gcgtcctggg
     9241 atgaacgtcg cctatctggc atttaacacc gccaaaccgc cgctaaataa tcccgctgtc
     9301 cgccatgcgc tggcactggc gattaataac cagcgcctga tgcaatccat ctattatggt
     9361 acggctgaaa cggcggcctc tattttaccg cgcgcctcgt gggcctatga caacgaggct
     9421 aaaattactg aatacaatcc ggcgaaatcg cgcgaacagt tgaaggcgtt ggggctggaa
     9481 aacttaacgc tgaaactgtg ggtgcccaca cgttcgcagg cgtggaaccc cagtccactg
     9541 aaaactgccg aactgattca ggcggatatg gcgcaggttg gcgtaaaagt ggtgattgtg
     9601 ccggtagaag gtcgttttca ggaggcgcgg ttgatggata tgagccatga tctgacgtta
     9661 tccggttggg cgacggacag taacgacccg gacagtttct tccgtccgtt actgagctgc
     9721 gcagcaattc attcgcagac caacctcgcc cactggtgcg atccgaaatt cgacagcgta
     9781 ttgcgtaagg cgctctcctc gcagcaactg gcggcgcgca ttgaagccta tgacgaagcg
     9841 cagagtattc tggcgcagga attgcccatt ttaccgctgg cgtcgtcatt gcgtttgcag
     9901 gcctatcggt acgatatcaa aggtctggta cttagcccgt ttggtaacgc ctcctttgct
     9961 ggggtgtatc gcgagaaaca ggatgaggtg aaaaaaccat gattatcttc accttacgcc
    10021 gcattttgtt attgattgtc accttgttcc tgctgacctt cgttggcttc agtttgagct
    10081 atttcactcc acacgcgccg ttacaaggcg cgtcactgtg gaatgcttgg gtgttctggt
    10141 ttaacggtct gatccactgg gattttggtg tttccagcat taacggtcaa ccgattgccg
    10201 aacagttaaa agaggtcttc ccggcgacga tggaactgtg catcctcgcc ttcggttttg
    10261 cgctgattgt tggcatcccc gtggggatga ttgccgggat tacgcgccat aagtggcagg
    10321 ataacttgat caacgccatc gccttactgg gcttttcaat cccggtgttc tggctggcgc
    10381 ttctgttgac gctgttttgt tcactcacgc taggttggtt gcccgtttca gggcgtttcg
    10441 ctctgctcta cgaagtgaaa ccgattaccg gttttgcgtt gattgatgcc tggctttcgg
    10501 actcaccatg gcgggatgaa atgatcatga gcgcaatccg ccatatgata ttgcccgtga
    10561 tcaccctgtc ggttgcgcca acaactgaag tgatccgcct gatgcgtatc agcactatcg
    10621 aagtgtatga ccagaactat gtaaaagcgg cggcgacccg cggtttgtcg cgctttacta
    10681 ttttgcgtcg ccacgttctg cataacgcgt taccgccggt tattcctcgc ctgggcttac
    10741 agttttccac catgctgacg ctagcgatga tcaccgaaat ggtttttagc tggccgggtt
    10801 tagggcgctg gttaattaac gccatccgcc agcaggatta cgcagccatt tccgccggag
    10861 tgatggtgtg tggctcactg gtcattattg ttaacgtgat ttctgatatt ttgggtgcca
    10921 tggctaaccc tctgaaacat aaggaatggt atgccttacg atagcgtata cagcgaaaag
    10981 cgcccgccgg gcacgctgcg taccgcctgg cgcaaatttt atagtgacgc ctctgcgatg
    11041 gtcggcctgt acggctgcgc ggggctggct gtactgtgta tttttggcgg ctggtttgcg
    11101 ccttacggca tcgaccagca atttctcggt taccaattat tgccgccgtc atggtcgcgc
    11161 tatggcgaag tttctttctt cctggggact gacgacctcg gacgcgatgt tttaagccgt
    11221 ttactgagcg gagctgcgcc aaccgtgggt ggcgcatttg tggtgacgct tgccgcgacg
    11281 atctgtggcc tggtactggg caccttcgcc ggggcgacgc acggcctccg ctcagcggtg
    11341 cttaaccata ttctggatac cttactggcg atcccttcgc tgctgctggc aattatcgtt
    11401 gtagcgtttg ccggaccgag tttgtctcac gccatgtttg ccgtctggct ggcgctgctg
    11461 ccgcgtatgg tacgttcgat ttacagcatg gtgcatgacg aactggaaaa agagtacgtt
    11521 atcgccgccc gtctggatgg cgcatcaacg ctgaatattc tctggtttgc tgtgatgcct
    11581 aacatcaccg ccgggctggt caccgagatc acccgcgcac tgtcgatggc aattctcgat
    11641 atcgccgcgc tgggctttct cgatctcggc gcacaactcc cctcgcctga atggggagcg
    11701 atgctcggtg atgcgctgga actgatttat gtcgccccgt ggactgtcat gctgccaggt
    11761 gcggcaatta tgattagcgt gctgttggtt aacctccttg gcgatggcgt tcgtcgtgcg
    11821 attattgcgg gggtggaata atgccattac tcgatattcg taacctgact attgaattta
    11881 aaaccgggga tgagtgggtt aaagccgtcg accgcgtaag tatgacctta accgaaggtg
    11941 aaatccgcgg tcttgttggc gaatccggtt ccggcaagag tttgattgca aaagcgattt
    12001 gtggggtgaa taaagataac tggcgtgtta ctgcagaccg tatgcgtttt gatgatatcg
    12061 atttgctgcg tctctccgca cgcgaacggc gcaagctggt tggtcacaac gtgtcgatga
    12121 ttttccagga accgcagtcg tgtcttgatc cttcagaacg tgtgggtcgc cagttgatgc
    12181 aaaacatccc agcctggacc tataaaggcc gttggtggca gcgttttggc tggcgcaaac
    12241 gccgtgccat cgaactactg caccgcgtgg ggattaaaga tcacaaagat gcgatgcgca
    12301 gttttcccta tgagttaacc gaaggtgaat gtcaaaaagt gatgatagcc attgcactgg
    12361 cgaatcaacc gcgtctgcta attgctgacg aaccgaccaa ctcaatggag ccaacaaccc
    12421 aggcgcaaat ctttcgcctg ttgacgcgtc tcaaccaaaa cagcaatacc actattttgc
    12481 ttatcagcca tgacttacaa atgcttagcc aatgggcgga taaaattaac gtgctttact
    12541 gcggtcaaac ggtggaaacc gcgccaagta aggagttggt gacaatgcca catcatcctt
    12601 atacccaggc gctgatccgg gcgataccag acttcggtag cgcgatgccg cataaaagtc
    12661 gcctcaatac gctgcccggc gctatcccac tgctggaaca gttaccgatt ggttgtcgtc
    12721 tggggccacg ttgcccgtat gcacaacgag aatgcattgt gacgccacgt ttgacggggg
    12781 cgaaaaatca tctctatgcc tgtcatttcc cgctgaacat ggagaaagag tgagatgatc
    12841 gaaacgctgc ttgaagtgcg taatttaagt aaaacgttcc gctaccggac cggctggttt
    12901 cgtcgtcaga ccgtagaagc ggtaaaaccc ttgagcttta cgctacgtga aggccagaca
    12961 ctggcgatta ttggcgagaa tggttcgggt aaatccacgc tggcaaaaat gctggcggga
    13021 atgatagagc ctaccagcgg cgagttattg attgacgatc atccgctgca ttttggcgat
    13081 tattccttcc gcagtcagcg tattcgcatg atttttcagg atccttcgac ctcgttgaat
    13141 ccccgtcaac gtatctcgca aattctggat tttccactgc gcctgaacac cgacctggaa
    13201 ccggaacagc gtcgcaaaca gataattgaa acgatgcgta tggttgggct gctaccggat
    13261 cacgtcagtt actatccgca tatgttggca cccgggcaaa aacagcgtct gggtctggcg
    13321 cgcgcgctga tattgcgccc caaagtcatt attgccgatg aagccctcgc ctcactggat
    13381 atgtcgatgc gttcgcagtt gattaatctg atgctggagt tacaggaaaa acagggcatt
    13441 tcgtatattt atgtcaccca gcatatcgga atgatgaagc atattagcga ccaggtgctg
    13501 gtgatgcatc agggcgaggt tgtcgagcga ggcagcaccg cggatgtgct ggcatcgccg
    13561 ctgcatgaac tcaccaaacg gctgattgcc ggtcattttg gcgaggcatt gacggcggat
    13621 gcatggcgta aagatcgcta attttctgaa tcctccttcc agattattca tctcattctg
    13681 acaagagatt aaatcttgtc agaatgagat gatggataaa ataaaatcaa atgcgcgtga
    13741 tttaagacgc aatctcactt tgcagaaacg aaagctctgg cgatatcttc gcagccgacg
    13801 ttttggtgat ttcaaatttc gccgtcaaca tccggtgggg agctacattc tcgattttgc
    13861 ttgctgctcg gcgcgtgtag tcgttgagct ggatggtggg cagcatgatt tggcagttgc
    13921 ctatgatacc aggcgcacta gctggcttga atcgcagggc tggaccgtgc tgcgtttctg
    13981 gaataacgag attgattgta atgaggagac ggtgctggag aatattctgc aggaactgaa
    14041 ccgccggtca ccctctccct gaaagagcga gggggccgac cgagccgaat agctgttgtg
    14101 gtgaaaatat gatgacagtt ctggagaata ttcggcaagg tctgaaccgt cccagccatc
    14161 gccctgaaag ggttaggggg ctgtataagc ctgttagcct gtttgttgct ggggtgacaa
    14221 tatttgcaca atacggtccc ctcacccctc tggggagagg attagggtga ggggaaaagc
    14281 gcccaccctg cccgcaccct gctccggtcg gacctggcag ctatagccac tcacagccag
    14341 gttgattata ataaccgttt atctgttcgt actgtttatt taaacaacga atcgcctgat
    14401 tttcaggcac aacaagcatc aacaataagg attaaagcta tgggttttct ttccggtaag
    14461 cgcattctgg taaccggtgt tgccagcaaa ctgtccatcg cctacggtat cgctcaggcg
    14521 atgcaccgcg aaggagctga actggcattc acctaccaga acgacaaact gaaaggccgc
    14581 gtagaagaat ttgccgctca attgggttct gacatcgttc tgcagtgcga tgttgcagaa
    14641 gatgccagca tcgacaccat gttcgctgaa ctggggaaag tttggccgaa atttgacggt
    14701 ttcgtacact ctattggttt tgcacctggc gatcagctgg atggtgacta tgttaatgcc
    14761 gttacccgtg aaggcttcaa aattgcccac gacatcagct cctacagctt cgttgcaatg
    14821 gcaaaagctt gccgatccat gctgaatccg ggttctgccc tgctgaccct ttcctacctt
    14881 ggcgctgagc gcgctatccc gaactacaac gttatgggtc tggcaaaagc gtctctggaa
    14941 gcgaacgtgc gctatatggc gaacgcgatg ggtccggaag gtgtgcgtgt taacgccatc
    15001 tctgctggtc cgatccgtac tctggcggct tccggtatca aagacttccg caaaatgctg
    15061 gctcattgcg aagccgttac cccgattcgc cgtaccgtta ctattgaaga tgtgggtaac
    15121 tccgcggcat tcctgtgctc cgatctatct gccggtatct ccggtgaagt ggtccacgtt
    15181 gacggcggtt tcagcatcgc tgcaatgaac gaactcgaac tgaaataatc gttctgtcgg
    15241 taaatattgg gcggcgttct gccgcccgtt atctctgtta tacctttctg atatttgtta
    15301 tcgccgatcc gtctttctcc ccttcccgcc ttgcgtcagg ataacgattt cctttacgac
    15361 caaggagcgc ccatggaaca acgccacatc accggcaaaa gccactggta tcatgaaacg
    15421 caatccagta ctacggagta tgacgttctg cctctggtcc cggaagccgc aaaggttagc
    15481 gatccctttc tgctcgacgt gatccttgat gaagagacgc tggccccctt cctttcatgg
    15541 ctggtccctg cgcgcgttct tgcagtggag ttgttccctg accagcttac cgtgacccgt
    15601 tcacaaacct tcaccgctta tgaacgcttg tcgacggccc tgacggttgc tcaggtttgc
    15661 ggcgtccagc ggttatgtaa ctactattcg gcgcgactta cgccgctccc cgggcctgat
    15721 tccaccaggg aaagtaatca tcggttggca caaatcacgc aatatgcccg ccaactggct
    15781 agctcgcctt ctattatcga caaccgatcg cgccagcatc tgaatgacgt cggtcttact
    15841 gcctgggact gtgtgatcat taaccaaatc attggtttta ttggctttca ggcgcggacc
    15901 attgcgacat ttcaggctta tctcgggcac ccggtacgct ggttacccgg tctggaaata
    15961 caaaactacg ccgacgcgtc actgtttgct gatgaatcaa tacgctggcg aagcagctat
    16021 gaggtggaaa aactacctga agagtacaca aaaagttcaa ctgcagaact ttgccaactg
    16081 gccgaaacac actctctcca ccctatttca ctttcccttc tcgaaaggtt gttaaacagt
    16141 acacgggtta atacacagcc ggataatcag cttgcggcgt tgttatgcgc gcggataaat
    16201 ggcagtcctg cttgttttgc cgcctgtatg gattcatcaa atgaatataa aaaaatcagc
    16261 acccttctgc gcaagggcga aaatgaaatt aaccaatggg ctgaccgtca ttctgttgag
    16321 cgcgctaccg ttcaggcgat acaatggctg acccgagcac ccgatcgctt tagcgccgcc
    16381 cagttcagcc cattactcga acacgaaaaa tcatcaacgc agattattaa tctgctggta
    16441 tggagcgggc tgtgtggttg gataaatcgc ttaaaaatcg cgttgggtga gacatattaa
    16501 ccttgccgcg tcagacagat tcgcgtaaaa ctgtcagccg ctctaatggc caccaaaata
    16561 gacaattatg tttcaggaca acccgctgct agcgcagctt aaacagcaac tgcattccca
    16621 gacgccacgc gctgaagggg tggtaaaagc cacagaaaaa ggctttggct tcctggaagt
    16681 cgacgcgcaa aaaagttatt tcattccgcc gccgcagatg aaaaaagtca tgcatggcga
    16741 ccgaattatc gcggtgatcc acagtgaaaa agaacgtgaa tccgcagagc cagaagaact
    16801 ggttgaaccg ttcctgactc gtttcgtggg taaagttcag ggcaaaaatg accgtctggc
    16861 catcgttcct gatcatccac tcttaaaaga cgccattcct tgccgcgcag cccgtggcct
    16921 gaaccacgag tttaaagaag gcgactgggc ggttgccgaa atgcgccgtc atccgctgaa
    16981 aggcgatcgt tctttctatg ctgaactgac acaatacatc acttttggtg acgaccactt
    17041 tgtaccgtgg tgggttaccc ttgcgcgcca taatctggaa aaagaagcac cagacggcgt
    17101 cgctaccgaa atgctcgatg aaggtctggt tcgtgaagat ctgaccgcgc tggattttgt
    17161 caccatcgac agtgccagca cagaagatat ggatgacgcc cttttcgcta aggcgttgcc
    17221 ggatgacaaa cttcagctga ttgtggcgat tgccgatcca accgcgtgga ttgctgaagg
    17281 cagcaagctg gacaaagccg cgaaaattcg cgcattcacc aactatctgc ctggcttcaa
    17341 catccctatg cttcctcgcg agctttctga cgatctctgc tcactgcgcg ccaatgaagt
    17401 ccgcccggta ctggcatgcc gcatgacgct ctccgctgat ggcaccattg aagataatat
    17461 cgaattcttt gccgccacca tcgaatccaa agcgaagctg gtgtatgacc aggtttctga
    17521 ctggctggaa aataccggta actggcagcc tgaaagtgaa gcaattgccg aacaagtccg
    17581 tttgctagcg caaatttgcc aacgccgcgg cgagtggcgt cataaccacg cactggtgtt
    17641 taaagatcgc ccggattatc gctttattct cggtgaaaaa ggtgaagtgc tggatatcgt
    17701 cgccgagcct cgtcgcattg ccaaccgtat cgtcgaagaa gcgatgattg ccgctaacat
    17761 ttgtgcggcc cgcgtactgc gcgataagct cggttttggc atctataacg tgcatatggg
    17821 ctttgatccg gcgaatgccg acgcgctggc agcgttgctg aaaacgcacg gtctgcatgt
    17881 cgatgccgaa gaagtgctca cgctggacgg tttctgcaaa ctgcgtcgtg aactggatgc
    17941 gcaaccaact ggtttcctcg acagccgcat tcgtcgcttc cagtcatttg ctgaaattgg
    18001 cactgaaccc ggtcctcact ttggcctcgg tctggaagca tacgccacct ggacttcgcc
    18061 gatccgtaaa tatggcgaca tgatcaacca ccgtctgctg aaagcggtta tcaaaggcga
    18121 aactgcgacg cgtccgcagg atgaaatcac tgtccaaatg gccgaacgtc gccgtctcaa
    18181 ccggatggca gaacgtgatg ttggcgactg gttatacgca cgcttcctga aagataaagc
    18241 cgggaccggc acccgtttcg cggcggaaat tgtcgatatc agccgtggcg gcatgcgtgt
    18301 gcgtttggtt gataacggcg ctatcgcctt tattccggca cctttcttac acgctgtgcg
    18361 cgatgaactg gtttgcagcc aggaaaacgg cactgtacaa attaaaggtg aaacggttta
    18421 caaagtaact gacgttattg acgtcaccat tgccgaagtc cgcatggaaa cccgcagcat
    18481 tattgcgcgc ccggtcgcgt aatctccttt cacggcccat tcctcatgga tgggccgttt
    18541 atttccccgc tctaccttcg ttatatccag gcagattttt taactgactt tcgtttgaaa
    18601 actggattac aaataaatat ataaaaacaa tgcgtttagc cgcagttaac cggaggatat
    18661 gcatcatgaa aaccgttagg gagtccacaa cgttgtacaa ctttctcgga tcgcacaatc
    18721 catactggcg gttgacggaa agcagcgatg ttttgcgctt ttctaccacc gaaaccacag
    18781 aacctgatcg tactttgcag ttatctgccg aacaggctgc tcgcatcagg gaaatgacgg
    18841 tcatcacctc cagcctgatg atgagtctga ccgtcgatga aagcgatctt tctgtgcatc
    18901 tggtaggacg aaaaatcaat aaacgggaat gggctggcaa cgcgtctgca tggcatgaca
    18961 caccggcggt tgctcgtgat ttatcacacg ggctttcctt tgctgagcag gtagtttctg
    19021 aagcacattc cgcaatagtg attctcgaca gccgggggaa tatccaacgc ttcaatcggt
    19081 tatgtgaaga ttacacaggg ttgaaagaac acgacgtcat tgggcaaagc gtgtttaaac
    19141 tgtttatgag ccgtcgtgaa gctgcggcat ccaggcgcaa taaccgtgta ttttttcgaa
    19201 gcggcaatgc atatgaagtc gaactgtgga taccaacacg taaaggccag cggctgtttc
    19261 tgtttcgcaa taaatttgtc cacagcggca gtggcaaaaa cgagattttt ttaatctgtt
    19321 ccggtaccga cattaccgaa gagcgccgcg ctcaggagcg actgcgtatt ctggcaaata
    19381 ccgacagtat caccggactg ccgaatcgta acgcaatgca ggagttaatc gatcacgcta
    19441 ttaatcaggc agataacaat aaagttgggg ttgtgtatct tgatttggat aattttaaaa
    19501 aggtcaacga cgcctatggg catttgtttg gtgaccagtt attacgcgac gtgtcattgg
    19561 ctattttaag ctgtctcgaa catgaccagg tgttggcgcg tccaggtggc gatgagtttc
    19621 tggtactggc atccaatacc tcacaaagcg cgctggaagc aatggcatca cgaattttga
    19681 cccgcttacg cctccccttt cgtattggtt taattgaagt ttataccagc tgttcagtag
    19741 gtatttcgct ctctcccgaa catggttcgg acagcgcgac tattattcgt cacgccgaca
    19801 cagcaatgta cacagcgaag gaaggcggac gaggacaatt ttgcgttttt actccagaa
//
LOCUS       DAJVTL010000080        19727 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.081, whole genome shotgun sequence.
ACCESSION   DAJVTL010000080 DAJVTL010000000
VERSION     DAJVTL010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19727
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.081"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(8..463)
                     /locus_tag="OQQ26_002734"
     CDS             complement(8..463)
                     /locus_tag="OQQ26_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001490992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HCS1858138.1"
                     /translation="MVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLGR
                     LINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIVCVIELDDPSHERADRIIR
                     DRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPLH"
     gene            complement(1272..2060)
                     /gene="phoH"
                     /locus_tag="OQQ26_002735"
     CDS             complement(1272..2060)
                     /gene="phoH"
                     /locus_tag="OQQ26_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HCS1858139.1"
                     /translation="MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEA
                     IGMARDSRDTSPILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHK
                     DVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIG
                     KVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLP
                     RGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAYS"
     gene            complement(2681..3952)
                     /gene="efeB"
                     /locus_tag="OQQ26_002736"
     CDS             complement(2681..3952)
                     /gene="efeB"
                     /locus_tag="OQQ26_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HCS1858140.1"
                     /translation="MQYKDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGT
                     LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLS
                     QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
                     TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA
                     ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQ
                     FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYTSDPEGKVIALDSHIRLAN
                     PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE
                     EYVKPIGGGYFFALPGVKDANDYFGSALLRV"
     gene            complement(3958..5085)
                     /gene="efeO"
                     /locus_tag="OQQ26_002737"
     CDS             complement(3958..5085)
                     /gene="efeO"
                     /locus_tag="OQQ26_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HCS1858141.1"
                     /translation="MTINFRRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM
                     TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT
                     CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA
                     IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR
                     LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI
                     SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY
                     RTKDGFETYDKLTDADRNALKGPITALAEDLAQLRGVLGLD"
     gene            complement(5143..5958)
                     /locus_tag="OQQ26_002738"
                     /pseudo
     CDS             complement(5143..5958)
                     /locus_tag="OQQ26_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309290.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
     gene            complement(6583..8091)
                     /gene="putP"
                     /locus_tag="OQQ26_002739"
     CDS             complement(6583..8091)
                     /gene="putP"
                     /locus_tag="OQQ26_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HCS1858142.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAI
                     LAAVMSTLSCQMLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN
                     PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALVGMIIGALTVIVWKQFGWL
                     GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES"
     gene            complement(8250..8459)
                     /locus_tag="OQQ26_002740"
     CDS             complement(8250..8459)
                     /locus_tag="OQQ26_002740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858143.1"
                     /translation="MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQ
                     LTFLKGATAKNVRECNLMKNSVAEH"
     gene            8514..12476
                     /gene="putA"
                     /locus_tag="OQQ26_002741"
     CDS             8514..12476
                     /gene="putA"
                     /locus_tag="OQQ26_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional regulator/proline
                     dehydrogenase/L-glutamate gamma-semialdehyde
                     dehydrogenase"
                     /protein_id="HCS1858144.1"
                     /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL
                     ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP
                     ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLHIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGK
                     LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYHLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSF
                     VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL
                     ANEHRLASLSSALLNSALQKWQALPMLGQPVAAGEMSPVINPAEPKDIVGFVREATPR
                     EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGS
                     TEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
                     QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
                     QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYN
                     RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
                     GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNAL
                     REWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL
                     TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS
                     DQLRALYEAVAARDGAIVSVQGFARDESNILLERLYIERSLSVNTAAAGGNASLMTIG
                     "
     gene            complement(12516..13154)
                     /gene="rutR"
                     /locus_tag="OQQ26_002742"
     CDS             complement(12516..13154)
                     /gene="rutR"
                     /locus_tag="OQQ26_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HCS1858145.1"
                     /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI
                     AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ
                     HLIFMIWASTQHYADFAPQVEAVTGATLRDEIFFNQTVENVQRIIIEGIRPR"
     gene            13442..14533
                     /gene="rutA"
                     /locus_tag="OQQ26_002743"
     CDS             13442..14533
                     /gene="rutA"
                     /locus_tag="OQQ26_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309285.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HCS1858146.1"
                     /translation="MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDF
                     ALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAA
                     TIDSISGRRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKS
                     DFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFA
                     PTAVRMKQAAEQTGRDVGSYVLFMVIADETDDATRAKWEHYKAGADEEALSWLTEQSQ
                     KDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDF
                     LSGIETFGERIQPLMQCRAHLPALTQEVA"
     gene            14533..15225
                     /gene="rutB"
                     /locus_tag="OQQ26_002744"
     CDS             14533..15225
                     /gene="rutB"
                     /locus_tag="OQQ26_002744"
                     /EC_number="3.5.1.110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415531.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxyureidoacrylate/ureidoacrylate
                     amidohydrolase RutB"
                     /protein_id="HCS1858147.1"
                     /translation="MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVS
                     TTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQP
                     QLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTG
                     IATNVCVESTLLDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFC
                     DALSPTSFARIA"
     gene            15237..15623
                     /gene="rutC"
                     /locus_tag="OQQ26_002745"
     CDS             15237..15623
                     /gene="rutC"
                     /locus_tag="OQQ26_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein C"
                     /protein_id="HCS1858148.1"
                     /translation="MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLTFDQHNNVLF
                     ADDPKAQTRHVLEIIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKP
                     ARFCIQCGLVKPDALVEIATIAHIAK"
     gene            15631..16431
                     /gene="rutD"
                     /locus_tag="OQQ26_002746"
     CDS             15631..16431
                     /gene="rutD"
                     /locus_tag="OQQ26_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706931.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein D"
                     /protein_id="HCS1858149.1"
                     /translation="MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVC
                     YDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYP
                     ASVTMLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPR
                     LEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSS
                     ELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL"
     gene            16441..17031
                     /locus_tag="OQQ26_002747"
     CDS             16441..17031
                     /locus_tag="OQQ26_002747"
                     /EC_number="1.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonic semialdehyde reductase"
                     /protein_id="HCS1858150.1"
                     /translation="MNEALSPGVLSTLFTDARTHNGWRETPVSDETLRELYALMKWGP
                     TSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFP
                     HGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFA
                     GSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL"
     gene            17042..17536
                     /gene="rutF"
                     /locus_tag="OQQ26_002748"
     CDS             17042..17536
                     /gene="rutF"
                     /locus_tag="OQQ26_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309280.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization flavin reductase protein
                     F"
                     /protein_id="HCS1858151.1"
                     /translation="MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTD
                     TPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQT
                     GVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALM
                     RPAC"
     gene            17557..18885
                     /gene="rutG"
                     /locus_tag="OQQ26_002749"
     CDS             17557..18885
                     /gene="rutG"
                     /locus_tag="OQQ26_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization transport protein G"
                     /protein_id="HCS1858152.1"
                     /translation="MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAIMGVQHAVAMF
                     GATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNG
                     QGMNPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAP
                     IAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLG
                     LGKAVDFTLVSHAAWFGLPHFSTPAFNDQAMMLIAPVAVILVAENLGHLKAVAGMTGR
                     NMDPYMGRAFVGDGLATMLSGSVGGSDVTTYAENIGVMAVTKVYSTLVFVAAAVIAML
                     LGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTL
                     VLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP"
     gene            complement(19143..19316)
                     /locus_tag="OQQ26_002750"
     CDS             complement(19143..19316)
                     /locus_tag="OQQ26_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415525.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HCS1858153.1"
                     /translation="MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAG
                     KKGGKSSHGKSDN"
BASE COUNT         4677 a         5319 c         5059 g         4672 t
ORIGIN      
        1 tacttagtta atgcaacggt tcactctttg tcgccgcgac taatgggcga attttgtcac
       61 gagtctccca gaccggagga atttcctcca atttagtgac agaagctcgt acaaaaggca
      121 cccgtgcaag agtcataatc gtatccaacc aacggtcacg aataatgcga tccgcccttt
      181 catgactcgg gtcatccagc tcaataacac agactatttt attgttcttc tttgaaacca
      241 gaacataatc cattgccatg ccattataaa ttgcaaagaa acgctttctt tcttcttcgc
      301 taaactcagg ttgttctgga aagttgatca agcgccccag agagacctgg caatggatat
      361 gacaataatg tccaaaccat ttttccagat tatcgaaata cattttttca caacgcgtga
      421 ttaaccactc ttttctttcc aataaaatac cttcggcaac cattccctga aataactcat
      481 ctcgctcttg ccaacgagag tcacgatagg ttttctgcgg tatatagctc cttgtcgacg
      541 ccttagcggc aggggaagag atgaagggac tggttgcgat ttagcgatga ttaccgatga
      601 ggcaactttt cggagtgtca attttctggc aatagcaaaa ccggcgataa atgcaattgt
      661 caaacaagtt acaaaagcca taaagctcat aattaatttt cacctatcca tgttgattat
      721 atttcattac caatgttact cgctgaagcg tgttacatgc caacaatgca acgatcaata
      781 tatagttagt atcatgtttt gattattaca accatcccta tttagccatt gcggcttgcc
      841 ttccacaaaa aaataacaac acacaatatt agccaaagaa ttaattaaga ttaaccttac
      901 atttataata ttatccctaa agaataaatc agaggaatat attcggtgtt aaacagtcag
      961 tcaaagtata gcccattgtt gattaaacct cataagcaaa attggcacca gatctcctgt
     1021 acaggttgaa tggccgaaaa aagataggca gatgctcatt tttttggctt ctggaagaaa
     1081 aactctccgc gctggcagta ttacactggt ctgatgctat gacgaaaaat gcctggtaag
     1141 agtatctaaa ccagactcca gttcagctta tcaacacgct caaagtcgcc cccctgaacg
     1201 ctaacctgaa gtgaaaatct gttgaaataa aacaaagccc ggttcgcccg ggctctgcac
     1261 cgataacaca cttaactgta ggcatgcagc gtacgttggc aaagtgccga acgtacgcag
     1321 tcctctttac cgaaccggac gatcccaacc atttcatctt cttcgaaacg ttccagcgcg
     1381 tcacttaatc cggagcacac gccgcgaggc aaatcgcatt gcgtgatatc accgttgacg
     1441 ataaccgtca cgttctcccc gaggcgggtt aaaaacattt tcatttgcgc ggcagtcaca
     1501 ttctgcgcct cgtcaagaat gacgactgca ttttcaaagg tacgtccacg catataggcg
     1561 aacggcgcaa tttccacttt ccctatttcc ggtcgcaggc agtactgcat aaaggaagcc
     1621 cctaagcgcc ggaccagcac gtcgtagacc gggcgaaaat agggagcaaa cttttctgcg
     1681 atatctccag gtaagaagcc aagatcttca tcggcttgca gaactggacg ggtgacgata
     1741 atcctgtcga catccttatg tatcagggcc tctgccgctt ttgctgcact gatccaggtt
     1801 tttccgcacc cggcttcgcc cgtagcaaat atcagctgct tactctcaat agccttcaga
     1861 tagtgcaatt gcgcttcatt tcgcgcgagg atgggagaag tatcgcgact gtcgcgggcc
     1921 ataccaatgg cttctacgcc gcccatctgc acaagcgagg tgaccgattc ttcttcacgc
     1981 tgcttatgac tgcgcgaatc ccgtctcagc acacgttttg cctcgcgacg agctttgatc
     2041 actgcttttt gtcttcccat ggagagcacc ttgagttgtt tgtattcatc acacgcgccg
     2101 ttggcagcgc gattatgcgc acgaacatca gagggttggc ttccttgtaa gccatagttt
     2161 gcttttggat aaaatgccga aaaacggcta cgcgcaccgt ttacggcgtc ggtaacacat
     2221 gaaaagaaag gatgaggttg aaaatgcaaa gtgacgagat gactaccgga ggagaaaact
     2281 ccgcgagtgg tgacgcgttg attatctaaa acatgtccag tacaggacgt taccatccgc
     2341 gatctccata gtgactgact atcactgccg ggaacttccg ctgctactta ataagtacaa
     2401 cagatctcgc atttattgca acaatatatt tacttatatt taactataaa acaccatttc
     2461 agtgacatta gtttctactg gaaagatgac agagtgatga cagtgatgaa aaaagctgtg
     2521 tgctttcagc aggatttgca tcaggcatca gtgcacgatc gccggatgcg gcgtgaacgc
     2581 cttatccagc ctaccaaacc cgcactgatt gtaggcatga taagacgcgc aagcgtcgca
     2641 tcaggcatct gcgcacaaat gccttatccg cctaaaaaca ttaaacccgc aataatgcgc
     2701 ttccgaaata atcgttcgcg tccttcaccc ccggcagcgc aaaaaaataa ccgccgccga
     2761 taggtttaac gtattcctcc agcgcttcgc cattgagcct tttttgtact gtcaggaagc
     2821 ctttttccag atcgtgctga tagcagacaa acagcaaccc catatccagt tgtccggagt
     2881 tggtgacgcc cagtgaataa ctgtagccac gacgcagcat caggctggac tcactctccg
     2941 ccgtgcgggg attcgccagc cggatatggc tgtccaacgc aatcaccttc ccttccgggt
     3001 cgctggtgta atcaggcaca tcatgctcat gctgcattcc cagcggcgca ccggtttgct
     3061 tatcacggcc aaaaatcgtc tgctgttctt tcagcggcgt tctgtcccaa aattccactc
     3121 gaaactgaat caagcgtact gcctgatagc tgccaccgat tgtccacgca ggctcctgct
     3181 gatctgccgt tacccacacc actttttgca tcaacttatc attctggcta tcgggattgg
     3241 cagtgccgtc tttgaaaccc agcaaattaa tcggcgtctc tttgccttta ctacgcgccg
     3301 cgtgatcgga aataaaccct tcccgcttcc agcgcacact gagcaaatcc ggcgtgtgtt
     3361 tgatgatatc gcgcagcgca tggatcaccg tgtcctgggt gttggcgcaa atctgtagca
     3421 acacatcacc atgacataac gccgcatcca gcgagtcgtt ggggaaacgc gtcatcttct
     3481 gcagcttttt tggcatctgt ggcgcaaggc caaagcgctc atcaaacaat gagtgaccca
     3541 ccgataacgt gatggtgaga ttatcgggcg caatgtagcc gccaagaatg ccggaatcga
     3601 gtggtggcag gcgcggattt ggcgtttctg gtgctgctcc gccctgactc agaaaagcaa
     3661 aacgctgagt caacaagcga aacaaccgct caagatcggc tttatcgctg gcaagcacat
     3721 caaacgccac cagcatcatt gcggcctgtt gtggcgtcag gatccctgcc tgatgctcac
     3781 cataaaacgg ctgtttctca ttgcgtgcat ccggtgaaag cgtacccggc gcactttgcg
     3841 ttttttgtgc atgagcgacc ggacaacttc ccgccagcgc cagtgcacct atccctttca
     3901 gtaaacgtcg gcgtgacggt tcattcacgc cgttttcatc tttatactgc ataacgctta
     3961 atccagtccc agcacaccgc gaagttgcgc cagatcttcc gccagcgcag taatcggtcc
     4021 tttcagtgca ttccggtcgg catcggtcaa tttgtcgtag gtttcaaaac cgtctttagt
     4081 acggtatttc gccagaatgg tatcgacctt tttaaagttg gcatcgactt ttgccaacag
     4141 ttccgggttg gctttttgca gttgtggacg cagcagatcg acaattttct gcgagccttc
     4201 aacgttagcc tggaaatccc acagatcggt gtggctgtag cgatcttctt caccgctgat
     4261 tttgctggct gccacttcct caatcagtcc ggctgcgccg ccgaccactt ttgaaggtgg
     4321 gaaagccagt tcactgatgc gtttttgcaa atcgaccaca tcggtataaa gctgctcagc
     4381 gtactgatcc atccctttgg tggtgttgtc gccaaacaat gctttttcca gacggtggaa
     4441 accagtgaat tttgggtcgg cggctttttg ctcgtaatca tcttcacggg cgtcaatgct
     4501 gccatccaga tcggagaaca gttcagcaat cggttcaatg cgctcatagt gctggcgcgt
     4561 cggcgcatac agtgctttcg ctttttcgat atcgcctgct ttaatcgcgt cggtaaaggc
     4621 tttggtgtcg gtcaccagct gcgtggtttc cgccatgaca tacgctttat atgcagtaat
     4681 tgcaccacca agacttaaca gcgcatcact ttgcgccgca tccgccgttg cctcaccttt
     4741 gacgatcaac ttccctttcg ggttagtcag cagaccgcag gtcatatcgt attcgccagg
     4801 ctgtaaattc gccgtcattt tctggctaaa accaggggcg atattttccc gctcttccac
     4861 caccatcacg cctttgagga tctcccactc cagcgccttc tggctatggt tctgaataat
     4921 gaactgtgtt ttcccggcgt taaccgtaat ggtcatcggt tcgcactgct tatccgtcac
     4981 ggtcactttg acctgcggca catcagcggc gttagccata aaagcagaag aaaacagcgc
     5041 agccacgctc aactgcaatg cgttacggcg gaagttaatg gtcatgacga gactacccct
     5101 ttaaagtatg ttgtaactaa gcaagagttt gcgtcgtatt tgttacgcgg agcgagacgc
     5161 tgtcgcccct gcgcgtggtg gcagagtaaa tgccaccagc gccgggatga gataaataaa
     5221 ccagacggcg acttcgctga cgctcggcgc ttcctgatag ccaaaaatct cttccatcag
     5281 cgtgccaaac agcgagtgag ttgagagcac cgcactcata tcgaaggcga tttcctgaaa
     5341 gtggttccac aatccggctt catgaaatgc gcgaatggca ccagcagcca gccctgcggc
     5401 gacgaagaga ataaacaggc tggtccattt aaaaaatgca ccaagattga ggcgaatacc
     5461 gccccagtag agcaggaagc ctagcaccac ggcagtagca agaccgagca ttgcacccag
     5521 cggcggccag atcccgacat cttgttgaaa tgccgccagc aggaaaaaga ccgactccag
     5581 cccttccctt gcaacggcaa aaaagaccat catcaccagc gcccagccat gatgatttcc
     5641 acgctgcaat gcgctatcga ctgcctgttc cagttgcact ttgacgttgc gcgacacttt
     5701 gcgcatccag aaaaccatct aggtaaggat caccacggcg atcaccgcca cgataccttc
     5761 aaacagttcc tgctcttttt gcggaaattc gccggtggtt tcgttaatga agatacccaa
     5821 gcccaggcac aacgcagcgg caagcaacac gccaatccat cggcctcgct gggtacgctt
     5881 aagatagctg gcaatcaaac tgacaatcag cgcggcttca agtccttcgc gcaacataat
     5941 gagaaacgga acaaacatgc cacccaccct taaacgtttt tctgagtcaa tctatgcaaa
     6001 gaaaaataca agcggaatgt ttataaaatg atgttggaat gtaaacaaag agaggtaata
     6061 ccaggggata taaacgatta ttccaggtac aaagatggga ttgtttacaa cgagccatgt
     6121 gttcttgcca gatgccgcgt aaacgcctta tccagccgac aaaactgtcc agactcaatg
     6181 catcagagct tccatgtaaa actgataagc gggtgtatca agcaatttcg tccatccgcg
     6241 attatcaaat ctaacttttt gcccggaaca taataacagc tcgggtgttg gtggcgtcaa
     6301 aatcgctgaa gcgttccccg aaggccgggg cagcccacat ggatgtgggc tgagggcgcg
     6361 tcttacagga cgttacctcg cgcccgaccc ggtagccgaa ggggataagc tgaaggtacc
     6421 gcgcagcggc gattttgttc gccagagccc gggggtgcag ggggccgcgg cgattggccg
     6481 ccccctgcgc gctccctgca ccattcaatt tatatggcga ggcacattaa gggagcgcaa
     6541 cccgctgctg aagccaaaca aaaccgccgc aggctaagtc ccttagcttt cctgcaaccg
     6601 tgacggcgga gccgaatgat agtgcgcatc ggcctcggca aagcgttttt gcatcgccgc
     6661 tgacggcgct ttacccagca aactaaacac tacaatcccg atactgccga agatgaagcc
     6721 cggaataatt tcgtacagtc ccagccagcc gaactgcttc cagacgataa ccgtcagcgc
     6781 accgatgatc atccccacca gcgcaccgtt acgcgtcatg cgtgaccaca tcaccgagaa
     6841 cagcaccacc ggaccaaacg ccgcgccaaa gcctgcccac gcgtagctca ctaagcccag
     6901 cacgcggttt tccgggtttg ccgccagcgc aatcgccacc agcgccacca ccagcaccat
     6961 cacacgccct acccacacca gctctttctg gctggcatgt ttacgcagaa acgctttgta
     7021 taaatcttcg gtaatcgcac tggagcacac cagcatctgg caacttaagg ttgacattac
     7081 cgccgccaga atcgccgaca gcagaatccc ggcaatccac gggttaaaca gaatttgcgc
     7141 cagttcgata aacacgcgtt cagcgttctg gtttaccgca cctgctaccg ccggatgctc
     7201 gttaaagtaa gcgataccaa agaagccaac agccaccgcc cctgccaggc agaggatcat
     7261 ccaggtcata ctgatacgac gcgcatggac aatgctgtgg tgagaatctg ccgccataaa
     7321 acgcgccagg atgtgcggct gcccgaagta acccagcccc caacccatca atgagataat
     7381 ggcaacaaag ttcagccctt tgagcatatc cacgttttcg atgctctttt gtttgatcac
     7441 ttccagcgag tcaccaaagc caccgacact gataatgacg ataaccggcg tcaggatcag
     7501 ggcaaaaatc atcaggctgg cctgtacagt gtcagtccag ctcaccgcga ggaaaccgcc
     7561 aataaaggtg taaaggatcg tcgccgcagc tcccgcccac agagccgttt cgtaactcat
     7621 gccaaaggta ctttcaaaca gacgcgcgcc tgccacaatg cccgaagcgc aataaatggt
     7681 gaagaacagc aaaataacca gcgcggagat aatgcgcaaa atgcggcttt tatcttcaaa
     7741 gcgcccggtg aaataatccg gcagagttaa ggcgttatta ttgtattcgg tatgaacacg
     7801 caaccgcccg gccaccagct tccagttaat ccacgcgcct aatgtcaggc caatggcgat
     7861 ccagctttcg gaaatcccgg aaagaaaaac cgcgcccggc aaccccatta acagccagcc
     7921 gctcatatcc gacgcacccg ccgataatgc cgtcacgaat ggcccaagac tacgaccgcc
     7981 cagaatatag tcgtcaaagt ttttcgttga tcgccaggcg ataaacccaa tcaatatcat
     8041 gccaaagata tagacacaaa atgtcaccaa catcggtgtg ctaatagcca tctaaagtct
     8101 ccaaaaaatt attatcggca atgtcgaaac ttgccgttat atctgccacc ggaacggggt
     8161 aacagagttt atgttttacc agggcgaccg tatcctgccg gaagcgctgg ttattcacaa
     8221 tcgatttaac acaccattta cattaaattt tagtgctcag cgacactatt tttcatcagg
     8281 ttgcactctc tcacattttt tgcggttgca cctttcaaaa aggttaactg ccgcagagaa
     8341 aaagtctgag ttattttttt aatccctgtc atatcgattt cttttattaa catttcattc
     8401 atttttaagc ttgctacgca ggtcacattt aacatggttg cacaaagttg caacatcatg
     8461 ggtatttcac gataacgtta agttgcacct ttcagaacaa caggagtaat ggcatgggaa
     8521 ccaccaccat gggggttaag ctggacgacg cgacgcgtga gcgtattaag tctgccgcga
     8581 cacgtatcga tcgcacgcca cactggttaa ttaagcaggc gattttttct tatctcgaac
     8641 aactggaaaa cagcgatact ctgccagagc tacctgcgct gctttctggc gctgccaatg
     8701 agagcgatga agcaccgact ccggcagagg aaccacacca gccattcctc gactttgccg
     8761 agcaaatttt gccccagtcg gtttcccgcg ccgcgatcac cgcggcctat cgtcgcccgg
     8821 aaaccgaagc ggtttctatg ctgctggaac aagcccgcct gccgcagcca gttgctgaac
     8881 aggcgcacaa actggcgtat caactggccg ataaactgcg taatcaaaaa aatgccagtg
     8941 gtcgcgcagg tatggtccag gggttattgc aggagttttc gctgtcatcg caggaaggcg
     9001 tggcgctgat gtgtctggca gaagcgttgt tgcatattcc cgacaaagcc acccgcgacg
     9061 cgttaattcg cgacaaaatc agcaacggta actggcagtc acacattggt cgtagcccgt
     9121 cactgtttgt taatgccgcc acctgggggc tgctgtttac tggcaaactg gtttccaccc
     9181 ataacgaagc cagcctctcc cgctcgctga accgcattat cggtaaaagc ggtgaaccgc
     9241 tgatccgcaa aggtgtggat atggcgatgc gcctgatggg cgagcagttc gtcacgggtg
     9301 aaaccatcgc ggaagcgtta gccaatgccc gcaagctgga agagaaaggt ttccgttact
     9361 cttacgatat gctgggcgaa gctgcactga ctgccgcaga cgcacaggcg tatatggttt
     9421 cctatcagca ggcgattcac gccatcggta aagcgtctaa cggtcgtggc atctatgaag
     9481 ggccgggcat ttcaatcaaa ctgtcggcgc tgcatccgcg ttatagccgc gcccagtatg
     9541 accgagtaat ggaagagctt tacccgcgtc tgaaatcact caccctgctg gcgcgtcagt
     9601 atgatattgg tattaacatc gatgccgaag aggccgatcg tctggagatc tccctcgatc
     9661 tgctggaaaa actctgtttc gagccggaac tggcaggctg gaacggcatc ggttttgtta
     9721 ttcaggctta tcaaaaacgc tgcccactgg tgattgatta cctggttgat ctcgccaccc
     9781 gcagccgtcg ccgtctgatg attcgcctgg tgaaaggcgc gtactgggat agtgaaatca
     9841 agcgtgcgca gatggacggc cttgaaggct atccggttta tacccgcaag gtgtataccg
     9901 acgtttctta tctcgcctgt gcgaaaaagc tgctggcggt gccgaatcta atctacccgc
     9961 agttcgcgac gcacaacgcc catacgctgg cagcgattta tcatctggca ggtcaaaact
    10021 actatccggg tcagtacgag ttccagtgcc tgcatggtat gggcgagcca ctgtatgagc
    10081 aggtcaccgg gaaagttgcc gacggcaaac ttaaccgtcc gtgtcgtatt tatgccccgg
    10141 ttggcacaca tgaaacgctg ctggcgtatc tggtgcgtcg cctgctggaa aacggtgcta
    10201 acacctcgtt tgttaaccgt attgccgaca cctctttgcc actggatgaa ctggtcgccg
    10261 atccggtcac tgctgtagaa aaactggcgc aacaggaagg gcaaactgga ttaccgcatc
    10321 cgaaaattcc cctgccgcgc gatctttacg gtcacgggcg cgacaactcg gcagggctgg
    10381 atctcgctaa cgaacaccgt ctggcctcgc tctcctctgc cctgctcaat agtgcactgc
    10441 aaaaatggca ggccttgcca atgctgggac aaccggtagc ggcaggtgag atgtcgcccg
    10501 ttattaaccc tgcggaaccg aaagatattg tgggctttgt gcgtgaagcc acgccgcgtg
    10561 aagtagaaca ggcgctggaa agtgcggtta ataacgcgcc aatctggttt gccacgcctc
    10621 cggctgaacg cgcggcgatt ttgcatcgcg ctgccgtgct aatggaaagc cagatgcagc
    10681 aactgattgg tattctggtg cgtgaagccg gaaaaacctt cagtaacgcc attgccgaag
    10741 tgcgcgaagc ggtcgatttt ctccactact acgccggaca ggtgcgggat gatttcgcta
    10801 acgaaaccca ccgtccatta gggcctgtgg tgtgtatcag tccgtggaac ttcccgctgg
    10861 ctattttcac cgggcagatc gctgccgcac tggcggcagg taacagcgtg ctggcaaaac
    10921 cggcagaaca aacgccgctg attgccgcgc aagggatcgc cattttgctg gaagcaggtg
    10981 taccgccagg cgtggtgcaa ttgctgcctg gtcggggtga aaccgtgggc gcgcaactga
    11041 cgggtgatga tcgcgtgcgc ggggtgatgt ttaccggttc aaccgaagtc gctacgttac
    11101 tgcaacgtaa tatcgccagc cgcctggacg ctcagggtcg ccctattccg ctcatcgctg
    11161 aaaccggcgg catgaacgcg atgattgtcg attcttcagc actgaccgaa caggtcgtcg
    11221 tggatgtact ggcctcggcg ttcgacagtg cgggtcagcg ttgttcggcg ctgcgcgtgc
    11281 tgtgcctgca agatgagatt gccgaccaca cgttgaaaat gctgcgcggc gcaatggccg
    11341 aatgtcggat gggtaatccg ggtcgcctga ccaccgatat cggtccggtg attgatagcg
    11401 aagcgaaagc caatattgag cgccatattc agaccatgcg tagcaaaggc cgtccggtgt
    11461 tccaggcggt gcgggaaaac agtgaagatg cccgtgaatg gcaaagcgga acctttgtcg
    11521 ccccgacgct gatcgaactg gatgactttg ccgaattgca aaaagaggtc tttggtccgg
    11581 tgctgcatgt ggtgcgttac aaccgtaacc agctaccaga gctgatcgag cagattaacg
    11641 cttccggtta tggtctgacg cttggcgtcc atacgcgcat tgatgaaacc atcgcccagg
    11701 tcactggctc ggcccatgtt ggtaacctgt atgttaaccg taatatggtg ggcgcagtgg
    11761 tcggggtgca accgttcggc ggcgaagggt tatccggcac cgggccgaaa gcaggcggtc
    11821 cgctctatct ctaccgtctg ctggcgaatc gcccggaaag tgcgttggcg gtgacgctcg
    11881 cgcgtcagga tgcagagtat ccggtcgatg cgcagttgaa agccgcattg actcagccgc
    11941 taaatgcact gcgggaatgg gcagcaaatc gtccagaatt gcaggcgtta tgtacgcaat
    12001 atggcgagct ggcgcaggca ggaacacaac gattgctgcc ggggccgacg ggtgaacgca
    12061 acacctggac gctgctgccg cgtgagcgcg tgttgtgtat tgccgatgat gagcaggatg
    12121 cgctgactca gctcgccgcc gtgctggcgg tgggcagcca ggtactgtgg ccggatgacg
    12181 cgctgcatcg tcagttagtg aaggcattgc catcggcagt cagcgaacgt attcaactgg
    12241 cgaaagcgga aaatataacc gctcaaccgt ttgatgcggt gatcttccac ggtgattcgg
    12301 atcagcttcg cgcattgtat gaagccgttg ctgcgcggga tggcgcaatt gtttcggtgc
    12361 agggttttgc ccgtgacgaa agcaatatcc ttctggaacg gctgtatatc gaacgttcgc
    12421 tgagtgtgaa taccgctgct gctggcggta acgccagttt aatgacgatc ggttaaacag
    12481 gtggccggag gatgttacaa cctcctccgg catctttaac gtggtcgaat cccctcaata
    12541 ataatccgct gcacgttttc aaccgtttga ttgaaaaata tctcatcgcg caaggtcgcg
    12601 cctgtcaccg cctccacctg aggggcgaaa tcggcgtaat gttgagtgga agcccaaatc
    12661 ataaaaatca aatgctgcgg atcaatcggc gcgagtttgc cgcttttgac ccaaccggca
    12721 atcagcgccg atttctcatc aattaatgcc ttcaaatcgc ccgtcagttc atccattaac
    12781 aacggcgcgc ctgccagcat ctccatacag aacaggcgcg aagcctgcgg ataatcgcgt
    12841 gagacttcca gcttcagacg gatgtactct tttatcgccg ccagcggggc gaaatcttca
    12901 cgaaacgctt ttaacggtgc cagccagata tcgagaatct gccgcagcac ggcaatatac
    12961 agcgcctctt ttgacgggaa gtaatacagc agattggttt ttgaaacacc cgccaactct
    13021 gcgatctgct ccagccttgt gccgtgaaaa ccgaattgtg aaaaagtgtc cagtgctgcg
    13081 ctaagaatcg cttttttctt cgcgcttact gcgcgcgaac gtttacccgt tgttttcact
    13141 gcgccttgcg tcatgcgctc tcccctcttg tagattggca acaggatagc aaaacccccg
    13201 cccggcctcg accttctgca ctctcatcgc gcacggatgc atgttttatg tgcaactgtt
    13261 ttgaccgttt agtccacttt ttaccagata ttttagataa cacaatgcta acacattaat
    13321 aacattcact ttttaaaaac tggcatccgc tttgcaaaca agccaatacg cggctgaaaa
    13381 ggatatgcag gatgcagcgc cccgtctgac tttcacttta cgagacgaag agaggttgat
    13441 gatgaaaatt ggcgtattcg tacctattgg caacaacggc tggctcattt cgacccacgc
    13501 gccgcagtac atgccgacct ttgaactgaa taaagccatt gtgcaaaaag cggagcatta
    13561 ccatttcgat ttcgccctgt cgatgatcaa actgcgtggc tttggcggca aaactgagtt
    13621 ctgggatcac aaccttgagt cgttcacctt gatggcgggt ctggcagccg tgacctcgcg
    13681 cattcagatt tacgccactg ctgccacctt aacgttacct ccggcaatcg tcgcccgtat
    13741 ggccgcaacc atcgactcca tctctggcag gcgttttggc gtcaacctcg tgactggctg
    13801 gcaaaagccc gagtatgagc agatgggtat ctggcctggc gatgactatt tctcccgtcg
    13861 ttacgactat ctcaccgaat atgttcaggt gctgcgcgac ctgtggggca cggggaaaag
    13921 cgattttaaa ggcgattttt tcaccatgaa tgattgtcgc gtcagtccgc aaccgagtgt
    13981 ccccatgaaa gtgatctgcg ccgggcaaag cgacgctggc atggcgttct ccgctcagta
    14041 tgccgatttc aacttctgtt tcggcaaagg tgtaaataca cccacggctt tcgccccgac
    14101 cgctgtgcgg atgaaacagg ccgcagagca aaccgggcgc gacgttggct cttatgtgtt
    14161 gtttatggtg attgccgatg aaaccgacga tgccactcgc gccaaatggg aacactacaa
    14221 agcgggcgcg gatgaagagg cgttaagctg gctaaccgaa caaagtcaga aagatacccg
    14281 ctccggtact gacaccaacg tccgtcagat ggccgatccc acttcggcgg taaacatcaa
    14341 tatggggaca ttagtcggtt cttacgccag tgtcgcgcgc atgttagatg aagtcgcaag
    14401 cgtgcctggt gccgaaggcg tgctgttaac cttcgatgat tttctgtcgg gaatcgaaac
    14461 cttcggcgag cgcattcaac cactgatgca gtgccgcgcc catctccctg cgctgactca
    14521 ggaggtggca tgatgacgac cttaaccgct cgaccggaag ccattacctt cgatccgcag
    14581 caaagtgcgc tgatcgtggt ggatatgcaa aacgcttatg ccacgccagg aggctactta
    14641 gatctcgccg ggtttgatgt ctcaaccact cgcccggtca ttgccaacat tcaaactgcc
    14701 gtgaccgcag cgcgagcggc agggatgctg atcatctggt ttcaaaatgg ctgggatgaa
    14761 cagtatgtcg aagctggcgg acccggctca ccgaattttc ataaatcgaa cgccctgaaa
    14821 accatgcgta agcagcccca gctgcagggg aaattgctgg cgaaaggctc ctgggattat
    14881 caactggtgg atgaactggt gccgcagcct ggcgatattg tgctgccgaa gccgcgctac
    14941 agcggtttct tcaatacgcc gctggacagc attttgcgca gccgtggaat acgccatctg
    15001 gttttcaccg gtatcgctac caacgtctgc gtcgaatcga cgctactcga tggctttttt
    15061 ctggagtatt tcggcgtggt gctggaagac gcaacacacc aggcggggcc ggaatttgca
    15121 cagaaagccg cgttgttcaa tatcgaaacc ttttttggct gggtcagcga cgtcgaaacg
    15181 ttctgcgacg cgctttctcc cacgtccttt gctcgtatcg cttaaggagt ttaacgatgc
    15241 caaaatccgt aattattccc gctggcagca gcgcaccgct ggcccccttc gttcccggca
    15301 cgctggctga tggcgtggtg tatgtctccg gtacgctgac ttttgatcaa cataataacg
    15361 tgctgtttgc cgatgaccca aaggcgcaaa cccgccacgt tctggaaatt atccgcaagg
    15421 tgatcgagac ggcgggtggc acgatggcgg atgtgacctt caacagcatc tttattaccg
    15481 actggaaaaa ttacgccgcg attaacgaaa tctacgccga gttttttccg ggtgataaac
    15541 cggcgcgatt ctgcattcag tgcggactgg taaaacctga cgcgctggtg gaaatcgcca
    15601 caattgcgca tatcgccaag tgaggccgcg atgaaacttt cactctcacc tcccccttat
    15661 gctgatgcgc ccgtagtggt gttgatttcg ggtcttggcg gtagcggcag ttactggtta
    15721 ccgcaactgg cggtgctgga gcaggagtat caggtagtct gttacgacca gcgcggcacc
    15781 ggcaataatc ccgacacgct ggcagaagat tacagtatcg cccagatggc agcggaactg
    15841 catcaggcgc tggtagccgc agggattgag cgttacgcgg tggtcggcca tgcgctcggt
    15901 gcgctggtgg ggatgcagct ggcgctggat tatcccgcgt cggtaactat gctggtcagc
    15961 gttaacggct ggctacgaat aaacgcccat acgcgccgct gttttcaggt tcgcgaacga
    16021 ttactgtata gcggtggcgc gcaggcatgg gtggaagcgc agccgttgtt cctctatccc
    16081 gccgactgga tggcggcccg cgcacctcgc cttgaggcag aagacgcgct ggcattggcg
    16141 cattttcagg gcaaaaataa tttactgcgt cgacttaacg ccctcaaacg cgctgacttt
    16201 agtcaccatg cggatcgcat ccgctgcccg gtgcaaatca tctgcgccag tgatgatctg
    16261 ctggtgccat cagcatgttc cagtgaactt catgccgccc tgcccgatag ccagaaaatg
    16321 gtgatgcgct atggcggaca cgcctgcaac gtgaccgatc ccgaaacgtt taatgctctg
    16381 ttactcaacg ggcttgccag cctgttacat caccgtgaag ccgccctgta aggaattgct
    16441 atgaacgaag cccttagccc aggtgtgctt agcaccctgt tcaccgatgc ccgcactcac
    16501 aacggctggc gggagacacc cgtcagcgat gagacgttac gggagcttta tgccctgatg
    16561 aaatgggggc cgacatcagc taactgttct ccggcacgga tcgtgtttat ccgcactgca
    16621 gaaggaaaag aacgtctgcg cccggcgctt tccagcggca atctgcaaaa aaccctgacc
    16681 gcgcccgtca ccgctatcgt tgcctgggac agtgaatttt atgaacggtt accactactg
    16741 tttccccacg gtgatgcccg cagttggttt acctccagcc cacaacttgc cgaagaaaca
    16801 gcgtttcgca acagttccat gcaggcggcc tatctgatcg tcgcctgccg tgcgctggga
    16861 ctggataccg gcccgatgtc gggttttgac cgtcaacacg ttgacgacgc cttttttgcg
    16921 ggcagcacgc tgaagagcaa tctgctgatt aatatcggct atggcgatag cagcaaactt
    16981 tttgcgcgcc tgccacgtct gtcctttgaa gaagcctgcg ggctgttgta aggagcaaac
    17041 catgaacatt gtcgatcaac aaacctttcg cgatgcgatg tcctgtatgg gcgcggcggt
    17101 caatatcatc accacggacg gtccagccgg gcgcgccggg ttcaccgcca gcgccgtctg
    17161 cagcgtgacc gatacgccgc ccacattact ggtgtgcctg aatcgtgggg cgtccgtctg
    17221 gccggtattc aatgaaaatc gaacgctatg tgtaaataca ctgagcgcag ggcaggagcc
    17281 gctttcaaat ctttttggcg gcaaaacgcc catggaacac cgctttgccg ccgcccgctg
    17341 gcagacgggt gtgaccggat gcccgcaact ggaagaggct ctggtttcgt ttgactgccg
    17401 tatcagccag gtggtgagcg tcggcaccca cgacattttg ttttgcgcca tcgaagcgat
    17461 tcatcgtcac gccacaccct acgggctggt gtggttcgat cgcagttatc acgcgctgat
    17521 gcgccctgct tgttaacctc cttaaggaga cagttgatgg caatgttcgg ttttcctcac
    17581 tggcagttaa aatcgacctc tacagagagc ggcgtggtcg cgccggatga acgattgccg
    17641 tttgctcaaa cggcaataat gggcgttcaa cacgcggtgg cgatgtttgg cgcgacggtg
    17701 ttaatgccga ttctgatggg gctggatccc aatctctcca ttttaatgtc ggggattggc
    17761 acgttactgt ttttctttat taccggcggg cgcgtcccca gttatctcgg ctccagcgcg
    17821 gcttttgtcg gcgtggtgat cgccgcaacg ggctttaacg gtcagggcat gaacccgaat
    17881 atcagcattg cgctaggcgg gattatcgcc tgtgggctgg tttataccgt cattggcctg
    17941 gtggtgatga aaattggtac acgctggatt gaacgactaa tgccgccggt ggtgacgggt
    18001 gcggtggtga tggcgattgg cctgaactta gcgcctatcg cagtgaaaag tgtatcggct
    18061 tcggcctttg atagctggat ggcggtaatg acggtgctgt gtattgggct ggtggcggtg
    18121 tttacccgtg gcatgatcca gcggttattg attctcgtag gattaattgt cgcctgtctg
    18181 ctgtatggcg tgatgaccaa cgttttaggg ctgggaaaag ccgtcgattt tactctcgtc
    18241 agccatgctg cctggttcgg tttgccacat ttttccactc ctgcttttaa tgatcaggcg
    18301 atgatgttga ttgcgcccgt ggcggtgatt ctggtggcgg aaaacttagg acatctcaag
    18361 gcggtcgccg ggatgaccgg acgcaatatg gacccgtata tggggcgagc attcgtcggt
    18421 gatggtctgg caacgatgct ttccggctct gtcggcggta gcgacgtcac cacctatgct
    18481 gaaaatatcg gtgtgatggc cgtgacaaaa gtctactcga cgctggtgtt tgttgctgct
    18541 gccgtcatcg ccatgctgtt gggcttttcg ccgaaatttg gcgcgctgat ccataccatt
    18601 ccggccgcgg tgattggtgg tgcatcaatt gttgtgttcg ggctgattgc cgtcgcaggc
    18661 gcaaggatct gggtacaaaa ccgtgtcgat ttaagccaga acggtaattt gattatggtc
    18721 gcagtaacct tagtgctggg cgcgggtgat tttgctctca cgctgggcgg ttttacgttg
    18781 ggagggatcg gtacagccac ctttggcgcg attttactca atgcgttgtt aagtagaagg
    18841 ttggttgacg ttccaccgcc agaagttgtt catcaggagc cataaacaga aaaccgccgg
    18901 ggttacccgg cggtgcagat tgttgacaac gtacgcattg ttcatgccgg atgcggcgta
    18961 aacgccttat ccggcctaca aaacagtgca aattcaatat attgcaatct tctggtaggc
    19021 ctgataagca tcgcgcatca ggcaagctta catttgtcat cagtatcaac caccgggtaa
    19081 ccggcggtga tggctttttg acgagctaca gacaaaaatg cattcgtcat tgattagccc
    19141 ggctagttgt cgcttttgcc gtgactgctc ttgccacctt ttttacctgc ttcagatgcg
    19201 cgctgcgggt cattcttgaa attacccccg ctgtgctgtc cacctttttt acctgcttct
    19261 gatgctcttt cgcggtcttc tgcaaaattg ccggaaccgc ctcgatggtt tgccattact
    19321 gacctccgtc tgggtataga catcatattg catagaatta acgcggcgta tggcggctgc
    19381 catattttcg ctacgtggga ctaagcttag tgaactgacg cgggcagacc cgcgtttggt
    19441 aatatcctgc aacagcttct tagcgagaat agatatcatc tccaataatt atccataagc
    19501 cgctcttatg attaaaaaaa cgcgatgaga taaaaatgtg tcattttgcg acaaaattac
    19561 gtgcttgtga aagttgttat aaatcaaata agtggttgtg aaatttgcac tctgaaaagg
    19621 acgtcttatc tttaaataag tggtagcgaa tcgctacgga atagagataa cacgaggagt
    19681 ggttagaaat ggctaaagtt ctggtgcttt tacatagcta aacacgt
//
LOCUS       DAJVTL010000081        19567 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.082, whole genome shotgun sequence.
ACCESSION   DAJVTL010000081 DAJVTL010000000
VERSION     DAJVTL010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19567
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.082"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..706)
                     /locus_tag="OQQ26_002751"
     CDS             complement(<1..706)
                     /locus_tag="OQQ26_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HCS1858154.1"
                     /translation="MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGF
                     YLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQ
                     AKGIEPLSIEKLQALQLIAPYRFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSIDI
                     ISKRRESLENQWGIEDSESYCALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFAVF
                     PSDYISDCANNRSGKSS"
     gene            complement(834..2795)
                     /gene="topB"
                     /locus_tag="OQQ26_002752"
     CDS             complement(834..2795)
                     /gene="topB"
                     /locus_tag="OQQ26_002752"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HCS1858155.1"
                     /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPKKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
                     DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
                     TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA
                     INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL
                     GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
                     SADKKKAAPRKRSAKKSPPADEAGSGAIA"
     gene            complement(2800..3843)
                     /gene="selD"
                     /locus_tag="OQQ26_002753"
     CDS             complement(2800..3843)
                     /gene="selD"
                     /locus_tag="OQQ26_002753"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HCS1858156.1"
                     /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETHDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
                     IEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYDAIPKLPGVEEYIKLGAVPGGTER
                     NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGEL
                     VPARGGRAMVEIR"
     gene            complement(3960..4511)
                     /locus_tag="OQQ26_002754"
     CDS             complement(3960..4511)
                     /locus_tag="OQQ26_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HCS1858157.1"
                     /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP
                     WHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEKNHKV
                     PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
                     GTPQLKASTSINVPDPTPFVTYF"
     gene            4672..6528
                     /gene="sppA"
                     /locus_tag="OQQ26_002755"
     CDS             4672..6528
                     /gene="sppA"
                     /locus_tag="OQQ26_002755"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707347.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HCS1858158.1"
                     /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
                     VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
                     TIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
                     YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYA
                     LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
                     GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
                     HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
                     GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
                     SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
     gene            6692..7708
                     /gene="ansA"
                     /locus_tag="OQQ26_002756"
     CDS             6692..7708
                     /gene="ansA"
                     /locus_tag="OQQ26_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HCS1858159.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
                     EMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY
                     PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
                     KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
                     TPDD"
     gene            7719..8360
                     /gene="pncA"
                     /locus_tag="OQQ26_002757"
     CDS             7719..8360
                     /gene="pncA"
                     /locus_tag="OQQ26_002757"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HCS1858160.1"
                     /translation="MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRG
                     EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQ
                     KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT
                     VLDALQLGYKVNVITDGCRGVNIQPQDSAHTFVEMSAAGATLYTLADWEETQG"
     gene            complement(8453..9811)
                     /locus_tag="OQQ26_002758"
     CDS             complement(8453..9811)
                     /locus_tag="OQQ26_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1858161.1"
                     /translation="MEQYDQIGARLDRLPLARFHYRIFGIISFSLLLTGFLSYSGNVV
                     LAKLVSNGWSNNFLNAAFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAAT
                     GAAFVPDMYWLIFFRFLMGTGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPM
                     LSAAIGVVVIAFFSWRIMFLLGGIGILLAWLLSGKYFIESPRWLAGKGQIAGAECQLR
                     EVEQQIEREKSIRLPPLTSYQSNSKVKVIKGTFWLLFKGEMLRRTLVAITVLIAMNIS
                     LYTITVWIPTIFVNSGIDVDKSILMTAVIMIGAPVGIFIAALIIEHFPRRLFGSALLI
                     IIAVLGYIYSIQTTEWAILIYGLVMIFFLYMYVCFASAVYIPELWPTHLRLRGSGFVN
                     AVGRIVAVFTPYGVAALLTHYGSITVFMVLGVMLVLCALVLSIFGIETRKVSLEEISE
                     VN"
     gene            complement(9929..10687)
                     /locus_tag="OQQ26_002759"
     CDS             complement(9929..10687)
                     /locus_tag="OQQ26_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1858162.1"
                     /translation="MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLE
                     DEGFLTRTYGGAVLNTAMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAADSS
                     STVMELLKLLQDRSDLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEI
                     ISRYHVDIMVMSCKGLDINSGALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFV
                     QLADFSHINYIITDKSPGAEWIAFCKDNNIQLVW"
     gene            complement(10824..11804)
                     /gene="ydjG"
                     /locus_tag="OQQ26_002760"
     CDS             complement(10824..11804)
                     /gene="ydjG"
                     /locus_tag="OQQ26_002760"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent methylglyoxal reductase"
                     /protein_id="HCS1858163.1"
                     /translation="MKKIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILE
                     AHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGD
                     RQLYKNLSPESIREEVEASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKAE
                     GKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMEHELLPLCRDNGIVVQVYS
                     PLEQGLLTGTITRDYVPGGARANKVWFQRENILKVIDMLEQWQPLCARYKCTIPTLAL
                     AWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER"
     gene            complement(11814..12761)
                     /locus_tag="OQQ26_002761"
     CDS             complement(11814..12761)
                     /locus_tag="OQQ26_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase family protein"
                     /protein_id="HCS1858164.1"
                     /translation="MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDA
                     INEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLV
                     TEDGERTFVTNRNGSLWKLNIDDVDFSRFSQAKLLSLASIFNSPLLDGKSLTDIFTQA
                     KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNYAEAKLLTGKETLDEIADCFLA
                     CGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNL
                     RECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG"
     gene            complement(12766..13602)
                     /locus_tag="OQQ26_002762"
     CDS             complement(12766..13602)
                     /locus_tag="OQQ26_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketose-bisphosphate aldolase"
                     /protein_id="HCS1858165.1"
                     /translation="MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPV
                     IISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMR
                     DASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE
                     FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKT
                     AISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGK
                     AE"
     gene            complement(13623..14666)
                     /locus_tag="OQQ26_002763"
     CDS             complement(13623..14666)
                     /locus_tag="OQQ26_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HCS1858166.1"
                     /translation="MKNSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVH
                     GFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCL
                     EGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHA
                     AMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLIMAEQLGATVVI
                     NGAKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAI
                     NFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVAHIYDYRDVQQAFEELVNN
                     KRDIIKGVIKISD"
     gene            complement(14683..16062)
                     /locus_tag="OQQ26_002764"
     CDS             complement(14683..16062)
                     /locus_tag="OQQ26_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1858167.1"
                     /translation="MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGL
                     ILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASM
                     VVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSY
                     PLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEA
                     EKVMRSIEEGVIRQTGKPLPPVVIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAM
                     NVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAMLMMDKIPRKTMGVG
                     LLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPESWPTEAKLRGSG
                     LANAVGRISGIAAPYAVAVLLSSYGVTGVFILLGAVSIVVAIAIATIGIETKGVSVES
                     LSIDAVANK"
     gene            complement(16089..17096)
                     /locus_tag="OQQ26_002765"
     CDS             complement(16089..17096)
                     /locus_tag="OQQ26_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HCS1858168.1"
                     /translation="MKALARFGKAFGGYKMIDVPQPICGPEDVVIEIKAAAICGADMK
                     HYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGD
                     FLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPIC
                     NAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRCQQI
                     CGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIG
                     HMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFD
                     E"
     gene            complement(17466..17738)
                     /locus_tag="OQQ26_002766"
     CDS             complement(17466..17738)
                     /locus_tag="OQQ26_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707337.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HCS1858169.1"
                     /translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
                     VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
     gene            complement(17781..18194)
                     /gene="msrB"
                     /locus_tag="OQQ26_002767"
     CDS             complement(17781..18194)
                     /gene="msrB"
                     /locus_tag="OQQ26_002767"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HCS1858170.1"
                     /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
                     HCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING"
     gene            18536..19531
                     /gene="gapA"
                     /locus_tag="OQQ26_002768"
     CDS             18536..19531
                     /gene="gapA"
                     /locus_tag="OQQ26_002768"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006322611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HCS1858171.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
                     DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
BASE COUNT         5049 a         5071 c         4458 g         4989 t
ORIGIN      
        1 ccgaggattt accggagcga ttattagcgc aatcagagat atagtctgag ggaaaaacag
       61 caaatttatt caacaaggcg ataacctgct ctggggcttc ctccatgttt gctttaaagg
      121 tattggctcc atggtcgcca gaaagaaaat gctccattaa ggcacaataa ctttcgctat
      181 cttcgatacc ccattgattc tctaaagact cgcgtctttt actgatgata tcgatcgagt
      241 caaaaggaag cacatgatat tggaaggtat ctttgccagg ttcaggcttt cgcggccaga
      301 actctagcgt ttcagaccat tgcttatgat agaatcgata aggtgcgatc aattgtagcg
      361 cctgtaactt ctcgatactg agcggctcaa tacctttagc ctgataataa tgcagttgtt
      421 ctttttttgc tttaaaaccg gcccgaacaa taagccccat cataattaat agataaagaa
      481 aagagcatcc cgcggtaatc aggcctcttt cattcaaacc gttggatgtt atcgctgcga
      541 atacaaacat tacagcgaca acacatgtta aataaaaccc ccacttacaa agcagcatgg
      601 ccttattttc tttaatcatc cgttcaaaat tactattaaa tatttcccag ccattaaaag
      661 aatacttctc gctcccagga tggttttgta ataaaacttt tttcatcaca ttccctgtta
      721 ttacatactt tagaggcgat aattttatcc atgcaaaaaa aatatccaac gaattttctt
      781 gaaccgctgg atatttcaga atatgactcg aatagcacga aagattcgct cgcttacgct
      841 atcgccccgc ttccggcttc atctgctggc ggactttttt tcgcactacg tttacgcggt
      901 gcagcctttt tcttatcagc actgccacca ctgcccggag ccacaatgcc gcgaaactgc
      961 cgcaccggtg tacgtttggc ttgatcaata agctgatata gcgtccccac cagcggctgc
     1021 ataaagtcct gatagcgaca ctgcttttcg ctgatttgcg tcagcaccga ttcccagtgc
     1081 gcggtcatgt ccggtcgcgt cgccatttct ggcagcgaat ggaataacgc ttttccggcg
     1141 tcggtggagt ggatatagcg cccttttttg gtcagaaaac cacgcttgaa cagcagttca
     1201 ataatcccgg cacgggttgc ttctgtcccc agaccatcgg tcgcacgaag gatctttttc
     1261 agatctttgt cctgcacaaa gcgcgcgatc ccggtcatcg ccgaaagcag tgttgcatcg
     1321 gtaaaatggc gcggcggctg ggtttgccgc tctaccactt cacctttttc acacagcaac
     1381 tcatcgcctt tcgccaccac aggcaatggc gtgccgtcgt tttcttcatc gcgctctttg
     1441 ctgcctaaca gcgtgcgcca gcctgcttca gcaagaaaac gggctttagc gacaaatttg
     1501 cctttggcaa tgtccagttc gataacacac ttgcggaaca ccgcatccgg gcagaactgc
     1561 atcaggtatt gacgggcaat caggttatag accttcgctt cgttctccgt caggttgatc
     1621 gcagaactcc gtgcggtcgg gatgatggcg tggtgcgcat cgaccttttt gtcatcccaa
     1681 cagcggttgc gtatatctgg atctaccact ggctgcggca acagatccgg tgcatgaacg
     1741 ctgatggcat tcatcaccgc gtggcgtccg gcaaaatgtt cttctggcaa atagcgacaa
     1801 tcggaacgcg gataagtgat tagcttgtgc gtttcgtaca gcttctggca gatatcaagc
     1861 acgttctgcg cgctcagacc gaagcgtttt gccgcttcaa tctgcaacgc cgaaagcgaa
     1921 aacggcagcg gcgcggattc tgattcccgt ttatcgttat agctggtgac aatagccggt
     1981 tgaccactaa tgcggttaac cacatgctcc gccagtggac gatgtaacaa gcgcccttct
     2041 tcatcctggt acggttcaca cgcttcgctc ggttgccaga tagcggtaaa ccgctcatcg
     2101 gcaggtgtca cgatatgtgc tttgacttca aagaagtctt tcgccacgaa gttttcaatc
     2161 tcttcatcgc ggcgcaccac cagcccgagc acgggtgtct gcacgcgtcc cacggaaagt
     2221 acgccctgat aaccggcatt gcgaccgaga atggtatacg cacgggtcat attgatgccg
     2281 tacagccagt cggcacgcgc tcgcgccagc gcagaaacgc acaatggcac aaactcactg
     2341 ttggaacgaa gacggtcgat cgcccgctca accgcctgcg ggttcaggtc gtttatcaag
     2401 caacgctgca cctgctggcg cttttccggt gccagttgca gatagtccag cacttcatcc
     2461 accagcaatt gcccttcacg atccgggtcc ccggcgtgaa cgatttcgct ggcttcatgc
     2521 aggaaccgtt tgatgacgtt aagttgtttg gtcacggagg gtcggggctg taattgccac
     2581 tttttcggga caatcggcaa atccgcaaga ttccagcgcg catagcggct gtcgtaggcg
     2641 tctggctgcg cctgctcaag caggtgaccg atacaccagg tcaccacctg accattaccg
     2701 cactcgataa agccatcgcc tttccggtgc ggtttgggca ggacatcagc aatggcgcgc
     2761 gccagactcg gtttttcggc aataaacaac cgcattgaat taacgaatct caaccatggc
     2821 acgaccgccg cgcgctggca ccagttcgcc aattgccgtc agttcaatgc caaactcggc
     2881 ggctgtagct ttgacctcat tttctgcttc cggcatgacc gccagcagca aaccgccaga
     2941 agtttgcgga tcgcacagca aatcgcgcac ttcacgcggc atttcaccca tcagatgacc
     3001 gtagctggca aagttacgtt cggtgccgcc aggcactgcg cccaacttaa tgtactcttc
     3061 aacccccggc aattttggga tcgcgtcata gtcaacgcgc gcctgcacac ctgcgccctg
     3121 acacatttcg ctcaaatggc ccagcagacc aaaaccagta acgtcggtca tcgcttttac
     3181 gccttcgatg ttggcaaagg acgcgcctgc gatgttcatc cggcacatca cttctgtcgc
     3241 cagtccctga tgttctggtt tcagcagtga ttttttctca gccgtggtaa gaacgccgat
     3301 ccccagcggt ttcgtcagga acagtttgca tccggcttgt gcggtactgt ttttcttcac
     3361 ccgctcggtc ggtacgatcc ccgtcaccgc cagaccaaaa atcggctccg gcgcatcgat
     3421 ggagtgaccg ccagccagcg caatacccgc ctgacgacat gcataacgac caccttcggt
     3481 cacttcgcgg gcaatttccg gtgaaagttt attaatcggc cagccgagga tcgcaatcgc
     3541 cataatcggt ttgccgccca tcgcgaagat atcactgatg gcgttagtcg ccgcaatacg
     3601 accaaaatcg aaaggattat caacgatcgg cataaagaaa tcggtggtgc tgataacgct
     3661 ggtgccattg cccagatcgt acaccgccgc atcgtcgtgg gtttcattac ccacaagcaa
     3721 attcggatca acaaacttcg cctgctcact gtgcaggatg gtttccaaca cttttgggga
     3781 aattttacag ccgcaaccag ctccgtggct gtattgggtc aaacgaatcg agttctcgct
     3841 catggacatc tcctgtcaat gcaatccggg tatggtaacc ctcattccgt gaagtgataa
     3901 gtgagagtgt ctgaattcct gcgcctttgc tcacaatcca gacagtttcg cgacaattat
     3961 cagaaataag ttacaaacgg cgtcgggtcc gggacgttta tcgacgtaga tgctttcagc
     4021 tgcggcgtgc cgaggtagag aaaaccgaca attttatcct gctcacggca accgaatgct
     4081 tcacgcacta ccggactttc agttaatgcg ccactgcgcc agatgccgcc aaacccctgg
     4141 gcaacggctg ccatttgcat cgccatgacc gcgcatccgg cagacatttc ctgttcccat
     4201 cgcgggactt tatgattttt ttcgcatttt gccaccaccg tgatgatgag cggtgcgcgg
     4261 aacggcgcat tacgggcttt gtcgatagct ttgtcatcac taccggcagc aatcgccccc
     4321 tgttccagta cggcgctgaa acgctcgcgc ccttcccctt caatcacaaa aaaatgccac
     4381 ggttgcatgg acttatggtc cggcgcgcgc atacccgcac gcaggatgtt ttgcagttgt
     4441 tcacccgttg gtgcgggttc agccaggcgg gaggcgctac ggcgattgat caatagttcg
     4501 agtgcatcca tttgattaac tcctgtcgtg agatttattc acaaaattaa cacgagagtg
     4561 gattttgtta cagcacagtc cgcaattcct gctgacaagt gccggttggg tcattacgat
     4621 aaccacatct attgcgcctg tgacaggtgt gaccttaagt tgggagaata catgcgaacc
     4681 ctttggcgat ttattgccgg attttttaaa tggacgtggc gtctgctgaa tttcgtccgt
     4741 gaaatggtac ttaacctgtt ctttattttt ctcgtgctgg ttggtgtggg gatctggatg
     4801 caggtcagtg gtggtgattc gaaagaaacg gccagtcgtg gtgcactgct gctggacatt
     4861 tctggtgtga tcgtcgataa acccgacagt tctcagcggt ttagtaaatt aagccgccag
     4921 ttgcttggtg ccagttccga tcgtctgcag gaaaactcac tgtttgatat cgtcaacacc
     4981 attcgccagg cgaaggacga ccgcaatatc accggtatcg tgatggatct gaaaaacttc
     5041 gcaggcggcg accagccgtc tatgcagtac atcggcaaag ccctgaaaga gtttcgtgac
     5101 agcgggaaac cggtttatgc cgttggcgag aactacagcc aggggcaata ttatctcgcc
     5161 agtttcgcca ataaaatttg gctgtcaccg caaggcgtgg ttgatctgca cggttttgct
     5221 accaacggtc tgtactacaa atcgttgctg gataagctga aagtttccac ccatgtgttc
     5281 cgcgtgggta cgtataaatc tgccgttgaa ccgtttattc gtgatgatat gtcaccggca
     5341 gcccgcgaag ctgacagccg ctggattggt gagctgtggc aaaactatct gaatactgtt
     5401 gccgctaacc ggcagatccc tgctcagcag gtattccctg gcgcgcaagg gttgcttgag
     5461 ggtttaacca aaaccggtgg cgataccgcg aaatatgcgc tggaaaacaa gctggtcgat
     5521 gcactggcat cgagtgcgga aatcgaaaaa gctctgacca aagagttcgg ctggagtaag
     5581 actgataaaa attatcgcgc catcagttat tacgattacg cattgaaaac gccggcagat
     5641 accggtgaca gcatcggtgt cgtcttcgct aatggcgcaa ttatggatgg cgaggaaact
     5701 caggggaatg ttggcggtga taccactgcg gcacaaatcc gcgacgctcg acttgacccg
     5761 aaagtgaaag cgattgtcct gcgtgttaat agcccaggcg gcagcgttac cgcgtctgaa
     5821 gtgattcgcg ctgaactggc agcagcccgg gcagcgggta agcctgtggt tgtatcgatg
     5881 ggcggcatgg cggcatctgg tggttactgg atttccacgc cagctaatta cattgtggct
     5941 aaccccagca ccctgaccgg ttctatcggt atcttcggcg tgatcaccac cgtagaaaat
     6001 agtctggatt cgattggtgt tcataccgat ggtgtctcaa cttcaccgct ggcggatgtt
     6061 tctatcacca gggcactgcc gccggaagcg cagcagatga tgcagttaag cattgagaat
     6121 ggctataaac gctttatcac gctggttgct gatgcgcgtc attctacgcc ggagcagatt
     6181 gataaaatcg cccagggcca cgtctggacc ggtcaggatg caaaagctaa cgggctggtc
     6241 gatagtctcg gggatttcga tgatgcggtc gccaaagcag cagagctggc aaaagtgaaa
     6301 cagtggcatc tggaatatta cgttgatgaa ccgaccttct tcgacaaagt gatggacaac
     6361 atgtctggtt ctgtccgggc aatgttgcca gatgcgttcc aggccatgtt acctgcaccg
     6421 ctggcctcgg tagcctctac tgttaaaagt gaaagcgaca agctggccgc gtttaacgac
     6481 ccacaaaacc gttatgcgtt ttgcctgacc tgcgccaacg tgcgttaagt cttgtactga
     6541 gtggccgaca gatcgtcggc cacatttttt acctcgacga atcctcttcc cgctgtctcg
     6601 ccccatattt ccttatccgc atagtatcag gtgcgcttcc cctgcctcac gtatatactt
     6661 ttgctctttc gatatcattc atatcaatat catgcaaaag aaatcaattt acgttgccta
     6721 cacgggcggg accatcggga tgcagcgttc cgagcagggt tatataccgg tgtcaggtca
     6781 tctacaacgc caactggcgc tgatgccgga attccatcgc ccggagatgc cagatttcac
     6841 cattcatgaa tatacgccgc tgatggattc ttctgatatg acgccagaag actggcagca
     6901 tattgctgaa gatattaaag cgcactatga cgactatgat ggttttgtca ttctgcacgg
     6961 caccgatacg atggcatata ccgcctctgc gctgtcgttc atgctcgaga atctcggtaa
     7021 accggtcatt gtgacagggt cacaaatccc gctagctgag ttacgctctg acggacaaat
     7081 taatctgctg aatgcgttgt acgttgcggc gaattatccg atcaacgaag taacgctctt
     7141 tttcaataac cgattgtatc gcggcaaccg cactaccaaa gcccatgccg atggttttga
     7201 tgcgtttgcc tctccaaacc ttcctccgtt actggaagca ggtatccata ttcgtcgttt
     7261 gaatacgcca cccgccccgc acggtgaagg ggaattgatc gttcatccaa tcacaccaca
     7321 accaattggc gtagtgacga tttatccggg gatttctgct gacgtcgtgc gcaattttct
     7381 gcgccaaccg gtgaaagcat tgattctgcg ctcatatggc gtgggtaatg cgccacaaaa
     7441 caaagccttc ctgcaggaat tacaagaagc cagcgatcgc ggtattgtgg tggtcaacct
     7501 gacacaatgt atgtccggta aagtgaatat gggtggttat gccaccggta acgccctcgc
     7561 ccatgccggc gttattggcg gtgcagatat gactgtagaa gccacgctaa ctaaactgca
     7621 ttacctactt agccaggaac tggatactga aaccattcgc aaggccatga gccaaaacct
     7681 gcgcggcgaa ctgacgccgg atgattaagg agactgcaat gccccctcgc gccctgttac
     7741 tggtcgattt acaaaatgat ttctgtgctg gtggcgcgct cgccgtgccg gaaggtgaca
     7801 gtacggtgga tgtcgctaac cgcctgattg actggtgcca gtcgcgcggt gaagcggtta
     7861 tcgccagtca ggactggcac ccggcgaatc acggcagttt tgccagtcag cacggtgtag
     7921 agccttatac gccaggccaa ctcgacggtt tgccacaaac cttctggcca gatcactgtg
     7981 tgcagaacag tgaaggcgca caattacatc cgttactgaa ccaaaaagcg atcgcagcgg
     8041 tgttccataa aggcgaaaat cctttagttg acagttacag tgcctttttt gataacggcc
     8101 gtcggcagaa aacctctctc gatgactggt tacgcgatca tgaaatcgat gaattgatcg
     8161 ttatgggcct ggctactgac tattgcgtga agtttaccgt gctggacgcg ttacagttag
     8221 gttataaggt aaacgtgatt accgatggct gtcgtggcgt gaatatccag ccccaggaca
     8281 gtgcacacac gtttgtggag atgtcagcag ctggggcaac gctatatacg ctggcagact
     8341 gggaagagac gcaggggtaa ttttacgctg gcctacaatt ctgtactggc attgtaggcc
     8401 aaataaaaca cgtcagtggt acatctggca attgatgcca tcaacgaaag atttaattca
     8461 cctcagaaat ctcttccagc gacaccttcc gcgtttcgat gccaaaaatg gagagaacca
     8521 gcgcacagag cactaacatg acaccaagca ccataaacac cgtgatcgac ccataatgtg
     8581 ttaataatgc cgcaacgcca tagggcgtga aaactgcgac gatccgtccg acggcattaa
     8641 cgaaacccga accgcgcagg cgtaaatgcg ttggccaaag ctccgggata taaaccgccg
     8701 acgcgaagca aacatacatg tataaaaaga agatcatcac cagaccatag attaaaatcg
     8761 cccactctgt agtctgaatt gaatagatat agcctaacac ggcaataata ataagtaagg
     8821 cggagccaaa taatcgacga ggaaaatgtt caataattaa tgccgcaata aatattccta
     8881 ccggagcgcc aatcataata acagcggtca ttaatattga tttatcgaca tcaatgccgg
     8941 agttaacaaa tatggtcggt atccatacgg tgatggtata aagcgaaatg ttcattgcaa
     9001 ttaaaacagt aatcgcgact aatgtacgtc gtaacatttc acctttaaac aggagccaga
     9061 aagtaccctt gattacttta accttgctgt tgctctgata cgaagtaagc gggggtaaac
     9121 gaatactctt ctctctttca atttgctgct ctacttcacg aagttggcat tctgcacctg
     9181 cgatttgccc tttccctgcc agccatcgtg gcgactcaat aaagtattta cctgagagaa
     9241 gccaggctaa cagtatgcca ataccaccca acagaaacat tatccgccaa ctaaaaaaag
     9301 cgataaccac cacacctatc gccgcagaca gcatgggcga ccagttacca acaaatgaga
     9361 gccgcgcgga ccattttcca cgcaccgtcg cggggataaa ctccgtaaat gaggcatagc
     9421 caaccataat tagcgccccc attcctgttc ccatcaggaa gcgaaagaag atgagccagt
     9481 acatatcagg gacaaaagcg gcccctgttg cagcaatacc gacgatgaga agatttatgc
     9541 gaaacgccct gcgccgccca aagtagtcac caataaaccc accagtaagt gagccgatga
     9601 aataaccaaa cattaatgcc gaggtaaagg cggcattgag gaaattattt gaccatccat
     9661 tgcttaccag ctttgctaag acgacattac ctgagtaact caaaaacccc gttaataaca
     9721 ggctaaagct tattatacca aatatacgat aatgaaaccg ggccaaaggc aagcggtcca
     9781 gtcttgcgcc aatttgatca tattgttcca ttgggtgcct cggatttgct aaaaaaggta
     9841 gcaattgcgg caaattcact tgccgcatct ttatcatcat tttatttcca ggcgcaggaa
     9901 caaataatat tgacaacgtg tgcttaaatt accacaccag ctggatatta ttgtctttgc
     9961 aaaatgctat ccactctgca cccggtgatt tatcagttat tatgtaatta atatgactaa
    10021 agtcagctaa ctggacaaaa gctttacgat caaacttaga gtgatcaacc aataacgcaa
    10081 cttctgtcgc ctgacggatc attgtctttt tgatttcagc ttccgcttca ttagagtcca
    10141 gcgcgccgct gttaatatca agacctttac aactcattac catgatatcg acatggtagc
    10201 ggctgatgat ctctttagta attcttcctt gcagggaaag tgtatttttg tttagttccc
    10261 cacccgttga aacgacttta atttctgact gagccagaac atgaatcgct tccgccgagt
    10321 tggttagcaa cgtcaggtca ctacggtcct gtaacaattt gagcaattcc attacggtac
    10381 tactggaatc ggctgccatg gtggttttat tgtcgataaa gggtagtgcc ttgcgtgcaa
    10441 taagctgctt ctcttcataa aacgatgaag cgcgcttata aaaatggata ttctccgtca
    10501 acatcgctgt atttaaaaca gcaccaccat aggttctggt caaaaaacct tcatcttcca
    10561 gcttctcaag atcgcggcga atggtttctt cggttacctg aaaaatccca ctcaaatttg
    10621 agactgtcac ctttttatcg ttggcaacca tttgcttaat tgcctgaatc ctgtcttttg
    10681 ccgccacgat tacacccctg tatcttttta catcacatta gcgcgattat cgcataaccg
    10741 atgtttactt tcaaaataac ctgtttgaat cacagatttt catcacagtt ttcacagaaa
    10801 cagaggtgaa tcgtgttgag tatttaacgc tccagggcct ctgccatttc cctcatcaat
    10861 gttgcgtctg catccgataa gttgatattc agtgccgcga cattttcgcg tacctgttcc
    10921 ggtgcagtag ccccactaag aatggagatt aaatcactct gttttaatat ccacgccagt
    10981 gccagagtgg gaattgtgca cttataacga gcacaaagtg gctgccactg ttcaagcata
    11041 tcaatcactt tcagaatgtt ttcacgctgg aaccagactt tatttgcccg agcgccgccc
    11101 ggaacgtaat cacgagtgat ggtgccggtc aacaatccct gctctagcgg ggaataaacc
    11161 tgaaccacaa tgccattatc acgacatagc ggcagcagtt cgtgttccat tgcccggtcg
    11221 aggatactgt atttcgcctg aataatatcc agttcaccat attgcagata ctcgcggata
    11281 tggtcagcat cgacgttagc agcgcctata gcgcgaattt tcccttcagc ctttaactca
    11341 ttaagcactg cgacagtttc agcgatcggc gtaaaaaatg gcggcaccga ctgccagtgc
    11401 gtcatgtaga tatcgatgta atcaataccc agacgttgca agctggcttc tacctcttcg
    11461 cggatagatt ccggggaaag gtttttatac aactgccgat cgccaacttt gttgaataaa
    11521 cttccttttc gttcccagac aatgccgcat ttggtttcta ctacaacctg ttcacggggc
    11581 agttttttta acgcctgacc gacgataact tcactattgc caaagttata tcctggcgca
    11641 gtatcaatca gattaatgcc acaacgatgg gcttcaagaa tcgtatcaat acatatttgc
    11701 cgatcgagat cgccattcca tgcaggaccg ccgccaatgg cccatgtccc caaccccatt
    11761 cgcgaaagcg taatatccgt tgtgcctaaa ggtatctttt tcatttgcct tcattatcct
    11821 tcgtattctt ccagcaattg ttcgaccagc tttctgtttt ttacgccggt ggtggcaccg
    11881 acgcttagaa ccgagatagc cgccgttgca ttggcaaagc gtgcgcattc acgcagattt
    11941 ttgccttcta acagtgccgc aataaaacct gaagcaaagt tatcacccgc gccaatggtg
    12001 tcgattgcgg ttattcctgc gaccgccggc accttcatcg tcatgtcacc acgcttgata
    12061 aagcagccgt ctttacccgt tttaatcacc accgttttta cgccgcacgc aagaaagcag
    12121 tcagcaattt catccagtgt ctctttcccg gtgagtaatt ttgcctcggc ataattagga
    12181 aacagataat cgacataact caatgcttcg caaatatcat ccagcgtttc attcaaccgc
    12241 ggtttgatca tatcggcaca gataatcatc tgccgggctt tagcttgcgt aaaaatgtct
    12301 gttagagatt taccatccaa tagaggactg ttgaaaatac tggccagaga taataatttc
    12361 gcctgagaaa accgcgaaaa atcaacatcg tcaatattca atttccacag actgccgtta
    12421 cggtttgtga caaacgtcct ctcgccatcc tccgtcacca gtccaacgtt aatagaggta
    12481 tctatgctga cgtcctgctt caggctttga atatctatat tctctttgcg gcaatggtcg
    12541 agaataaatt gccctgcggc atctttacca atacgactca ttaatgctgt gcgatggccc
    12601 agacgagaaa taattgttgc ttcatttatt gcatcacccc cggtggtcat tgcgattctt
    12661 tcaagaggat aagaatccac atcaaagata tttttactga ccggttgcaa tggaatatca
    12721 acaatagcgg cacctataca aataacgtcg agattatcca tatcattatt ccgctttgcc
    12781 atcagaaccg aacagtttaa ttttttccaa tgcccgttct tttacagctt tacgtacttc
    12841 acgttctaaa tgcaggaaag gctgatcctg gttttctttc actgctacca ttgcggcctg
    12901 acagagctcc gtatgaatgt tgattttcgc aatacccaac gaaattgcag ttttaatgtc
    12961 ggcatcactg atccccgatg cgccatgcaa aaccagcgga acagaaacag catcgcgtac
    13021 gcgtttgacg acctcaaagt tcaattgcgg ctctgacgta taaaccccat gctggttgcc
    13081 gatggcgaca gccaatgagt cacagcccgt acgttcaaca aattcagccg cctggtcagg
    13141 atcggtatag tgatagcccg ccagcgcttc ctcataaacg gtttcattac cgacatgccc
    13201 taattccgcc tctaccggaa tacccagcgg atggaagaaa tcgacagcct ctttggttaa
    13261 acgaatattt tcttcgaaat caaatgcaga agcatcacgc attaatgaat tcataccatg
    13321 agtccaggcg ttatgaataa tctccatact ccgaccatga tcccaatgag ttattaccgg
    13381 caccgttgct ttttgtgcca ttgataccat catgtgagag aaatcttcaa atgaggtgtt
    13441 accgacaaaa cctgtaccaa aagaaataat aactggtgat ttcgcttctt cggctgcgtc
    13501 gataacgccc atcaacattt ctgcattcca tacgttaaaa tgggcaattg cataatgttt
    13561 atttgtggca tcgttttccc aatatctgat atctgcgagc atattctgtt ctcccgtatt
    13621 aattaatcgc taattttaat aacgccttta ataatgtcgc gtttgttgtt aactaactct
    13681 tcaaatgcct gttgtacatc ccgataatcg taaatatgcg ccaccatcga tttcacatcg
    13741 aatcgccctg aagaaatagc ttcaatcgtg accggataac gattggcata gcggaatacc
    13801 gtctggatag tgacttcgcg attgattttg aggaaattga ttgccgaatc gcccggtaca
    13861 gtaccaacaa tcataatttt accgccgcgc attaccagat aaggtgcctg tttaacggtg
    13921 accgcagaac ccgctgtttc gaaaacaata tctgcgccca tgtcttcggt aaattgctga
    13981 cagcgtgcaa tagtgtcttc ttttgcgccg ttaataacca ctgtcgcacc aagttgttcc
    14041 gccattatca gacgtttttc cagcacatca acgacggcaa tttccgttgc tcccaggcat
    14101 ttgcacgctt gcaacgtcat caaaccaata caacctgctc ccagaataat tatcttctta
    14161 cccggtttaa catctgccag catcgcggca tgcatcccga ctgcggcagg ctccaccagc
    14221 gccccttcca tcgtgtccat attgtctggc agtttgtaag taaagctctc cggatgacac
    14281 agatagtgcg ttaatgcgcc gcggtagttg ggttgtgtcg ccataaaatc aacgtccggg
    14341 cagatgttat atttgccttc cagacagtaa cgacagtgac cgcaaggaac gccaggttcg
    14401 atatttaccc gatcccccgg tttaaatttg cgcacgcggc ttcccacagc cacaaccgtc
    14461 ccggcgcatt catgacccag gccaatttct tgatttgggt ctttaggcgg aataaacggg
    14521 cctgattcaa aaccatgtac atctgaacca caaataccga catattctac tttaatcaaa
    14581 acttcatctt ctttaggtac tggtatttct gctgaaataa ttttcattgt gcccggcacc
    14641 tgcaatattg cttttgaatt tttcattttg aatccacccg tattatttat tggctactgc
    14701 atcaatactt aaactttcaa cggagacacc tttggtttca attccaatgg tggcgatagc
    14761 aattgcgaca acaattgaaa cagcccccag aagaataaag actcccgtta cgccataact
    14821 actgagcagc actgcaacgg cataaggtgc ggcaatacca ctgattcgcc ctaccgcatt
    14881 cgccagaccg gagccacgga gtttggcctc tgtcggccag ctttcaggga catacactgc
    14941 cgaggcatag caaacgtaca tatagacgaa agtaatcagg aagaaaccaa tcaacgttat
    15001 gagcaacata ctggtttgca gtgaatagat atatccgagc accgcaatca ggattaatag
    15061 ccccacaccc attgttttac gcggaatttt atccatcatc agcatggcaa taaaaatacc
    15121 aaatggcgcg ccaaacatac tcatggtatt taaaacaatc gagtctttta aattaatccc
    15181 ctgggtcatg aatattgttg gcaaccagtt aattagtgtg tactgcacaa cgttcatggc
    15241 aatcagcaca caagagccta atatcacgcg tttcagtaat actcctgtca gtaaggctga
    15301 atacggcacc gcttgtggcg ctttaccgtc atcagcaata accacaggcg gcaaaggttt
    15361 acccgtctgg cgtatgacgc cttcttctat actccgcatg actttctcgg cttcctgata
    15421 ccgtccgcgc gattccagcc agcgcgggga ttcaggaaag tagcgccagg ccagcgccgt
    15481 agcgataagc gacaatattg caggaataag cagttgtacc cgccagttcc actctgcact
    15541 aatcagcggc gtgagtccca tcgcaatcag tgaacagagc ggatatgacc agttgccaat
    15601 aaaggaaacc cgactggacc acgttccgcg atttctaccg ggcatatatt cggtgaaacc
    15661 agcaaacagt gtaaccagta aagctcccag cccaacgccc atcacaaaac ggcaggcaat
    15721 aagaaaatcc atattcggtg agaaagcacc gacaaccatc gaggcaatat gaatggcctc
    15781 atagaggatg aacgcatttc tgcgaccggt tttgtcgcca atgatgccgc ccaccagcgc
    15841 accgagaaac attccggcgg tcgtgattgc tgagaatgtg gctgtggtgg aattatctgt
    15901 ccagcccaac gctttcagct gcgcgaggat caagccacca acggcattac tccagcagac
    15961 aagcaagcca aacgcgacga tggcaaacat tgacgaatgc cagcggcaat ccggtaagcg
    16021 atccagccgt gcaccacaat gcggttttgt tatctgttcc atgcgataac gttccttcag
    16081 gagagtagtt attcatcaaa gtcgtaagtc atgatcactt tgattgcggt tttatcgacc
    16141 atcgcatcaa acccttcgcg ccattgcgac aggccgatac gatgcgtgat catcggtttg
    16201 actttgatag cgccgctggc taatagccgg atagcgttac gccatgaggt ggagtcatag
    16261 gccatatgcc caatgatgct tttattccag gcggtaatgt cattaatcga gaaatcaaga
    16321 ggtttgaagc ccattccaac gcgtaccact tccccattcg ggcggagcat ttcgatggct
    16381 tgtttcagtg cgatattggc accggagcat tcaatcacca gtcccagatt atctttgcca
    16441 caaatttgct gacagcggac cgccacatct tcttgcagac caacgacgac gatatttacc
    16501 gcccccataa tccgcgccat ttgtacggaa aacagcccga gtgggccagt gccgatgacg
    16561 acaacatcct gaccaggaag gaatttcgat tgctgcgcga tggatttata ggcattacag
    16621 atagggtcaa gtacggctgc gtcctcataa tcaacaccat cagggatttc ccacaacgca
    16681 tgacgatgaa ttttgagaat ttcaccagga accagacaat atttggaaaa accaccgccc
    16741 caggtattgt tatccagacc aaggtttact ttttctgtac aacacagaaa atcaccctgt
    16801 tcacaggccg gacaaacgcc gcaaacgtga ccgctgttat ccgacacgac gcgttgcccc
    16861 actttccagt ctttgacttt ttcaccaacc tgcgcaatac aacctgcgaa ctcatggccg
    16921 cggatagagt taaactcatc agaaccgcta tcgacattgt agtgcttcat gtctgcgccg
    16981 cagattgccg cggctttgat ttcaatcact acgtcttccg ggccacaaat gggttgtggg
    17041 acatcaatca tcttgtagcc gccaaaggcc ttgccaaacc gagccagtgc tttcattgcg
    17101 tcatcctctg tgttttgttt tgcttagatg gccatcatac ttacccacat gatttttgag
    17161 gtcaacatta aatctgcaaa acacagataa tgatctgcgt tttacaactt agatcacaat
    17221 tacgcagaaa atggctgggt ctgttacagg ttggtggaag gcgggacgca aaaagagcaa
    17281 attcgagagg gattaccggc caaataggtc tgagacttaa gttcaggaga agtcattcag
    17341 gcgtgaacgc gactgcaaga gatcggactg ggacttagcc aggtcgggtc gagataattg
    17401 agacgagtcg tggggtcatt gttggctatc cccttcatag ccgcggcaaa aaggggatga
    17461 accacttact taaacatggc aataggcttt gctgagatac caaaatcttc ttttaactgc
    17521 tgtttgctct tcatgaccat ctgaccattt gtgtcaattg tcatatgctg tgcttcggta
    17581 ttatggcggg cttgccacag catcaccagt tgcaggcaat tctctttttg ttcctcggtc
    17641 aacgcaacgc catcaggcca tttccccagt tcaacggcgg tcgacaaacg ctggtatacc
    17701 tcaggcgtca tgctgttgat aatgtcatca agattcataa tttttccgct cctgtggaat
    17761 aagttgctga atcgtttttt tcaaccgttg atttcttcgc cgttttcgcc atcggtaaag
    17821 cgtaaagagg cagagttaac acaataacgt tcgcctgttg gttgcggccc gtcgggaaag
    17881 acatgcccca gatgggcatc acagttaccg caacgaattt ctatgcgctg cattccatgt
    17941 gacaagtctt tgatataacg aatggattct tcactcaccg gttcgtagaa actgggccag
    18001 ccacagccgg aatcatactt ggtttgggaa tgaaacagcg gggcatcgca gatcaaacag
    18061 tgatatacgc cgtcacgctt gttatgcagt aaacgacccg taaatggcgg ctctgtccca
    18121 tgattctgcg tcacgtaaaa ctgcatctcg gacaaatttt ttttcagttc ttctgccgaa
    18181 ggtttattag ccatttgctc acatctcact ttaatcgtgc tcacattacg cgactgattc
    18241 taacaaaaca ttaacaccaa ctggcaaaat tttgtcctaa acttgatctc gacgaaatgg
    18301 ctgcacctaa atcgtgatga aaatcacatt tttatcgcaa ttgcccttta aaattcggga
    18361 cgccgacccc atgtggtctc aagcccaaag gaagagtgag gcgagtcagt cgcgtaatgc
    18421 ttaggcacag gattggtttg tcgcaatgat tgacacgatt ccgcttgacg ctgcgtaagg
    18481 tttttgtaat tttacaggca accttttatt cactaacaaa tagctggtgg aatatatgac
    18541 tatcaaagta ggtatcaacg gttttggccg tatcggtcgc attgttttcc gtgctgctca
    18601 gaaacgttct gacatcgaga tcgttgcaat caacgacctg ttagacgctg attacatggc
    18661 atacatgctg aaatatgact ccactcacgg ccgtttcgac ggtaccgttg aagtgaaaga
    18721 cggtcatctg atcgttaacg gtaaaaaaat ccgtgttacc gctgaacgtg atccggctaa
    18781 cctgaaatgg gacgaagttg gtgttgacgt tgtcgctgaa gcaactggtc tgttcctgac
    18841 tgacgaaact gctcgtaaac acatcaccgc tggtgcgaag aaagtggtta tgactggtcc
    18901 gtctaaagac aacactccga tgttcgttaa aggcgctaac ttcgacaaat atgctggcca
    18961 ggacatcgtt tccaacgctt cctgcaccac caactgcctg gctccgctgg ctaaagttat
    19021 caacgataac ttcggcatca tcgaaggtct gatgaccacc gttcacgcta ctaccgctac
    19081 tcagaaaacc gttgatggcc cgtctcacaa agactggcgc ggcggccgcg gcgcttccca
    19141 gaacatcatt ccgtcctcta ccggtgctgc aaaagctgta ggtaaagtac tgccagaact
    19201 gaatggcaaa ctgactggta tggcgttccg cgttccgacc ccgaacgtat ccgtagttga
    19261 cctgaccgtt cgtctggaaa aagctgcaac ttacgagcag atcaaagctg ccgttaaagc
    19321 tgctgctgaa ggcgaaatga aaggcgttct gggctacacc gaagatgacg tagtatctac
    19381 cgatttcaac ggcgaagttt gcacttccgt gttcgatgct aaagctggta tcgctctgaa
    19441 cgacaacttc gtgaaactgg tatcctggta cgacaacgaa accggttact ccaacaaagt
    19501 tctggacctg atcgctcaca tctccaaata agttgagatg acactgtgat ctaaaaagag
    19561 cgacttc
//
LOCUS       DAJVTL010000082        19561 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.083, whole genome shotgun sequence.
ACCESSION   DAJVTL010000082 DAJVTL010000000
VERSION     DAJVTL010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19561
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.083"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            72..1625
                     /gene="caiC"
                     /locus_tag="OQQ26_002769"
                     /pseudo
     CDS             72..1625
                     /gene="caiC"
                     /locus_tag="OQQ26_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308067.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetaine/carnitine-CoA ligase"
     gene            1734..2519
                     /gene="caiD"
                     /locus_tag="OQQ26_002770"
     CDS             1734..2519
                     /gene="caiD"
                     /locus_tag="OQQ26_002770"
                     /EC_number="4.2.1.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonobetainyl-CoA hydratase"
                     /protein_id="HCS1858172.1"
                     /translation="MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDD
                     PQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVN
                     GYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVM
                     TGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMP
                     VEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR"
     gene            2525..3115
                     /gene="caiE"
                     /locus_tag="OQQ26_002771"
     CDS             2525..3115
                     /gene="caiE"
                     /locus_tag="OQQ26_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine operon protein CaiE"
                     /protein_id="HCS1858173.1"
                     /translation="MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLR
                     GDYGRLIVQAGANIQDGCIMHGYCGTDTIVGENGHIGHGAILHGCVIGRDALVGMNSV
                     IMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRTVSDDELHWKRLNTKEYQ
                     DLVGRCHASLHETQPLRQMEENRPRLQGTTDVMPKR"
     gene            complement(3234..3629)
                     /gene="caiF"
                     /locus_tag="OQQ26_002772"
     CDS             complement(3234..3629)
                     /gene="caiF"
                     /locus_tag="OQQ26_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414576.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine metabolism transcriptional regulator
                     CaiF"
                     /protein_id="HCS1858174.1"
                     /translation="MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNT
                     LTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVR
                     KTPRIPAVPLTELNREQKWQMMLSKSMRR"
     gene            complement(3890..7111)
                     /gene="carB"
                     /locus_tag="OQQ26_002773"
     CDS             complement(3890..7111)
                     /gene="carB"
                     /locus_tag="OQQ26_002773"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HCS1858175.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLALSPTKELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGV
                     REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
                     ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
                     AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
                     YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
                     TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
                     GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
                     ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
                     RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK"
     gene            complement(7129..8277)
                     /gene="carA"
                     /locus_tag="OQQ26_002774"
     CDS             complement(7129..8277)
                     /gene="carA"
                     /locus_tag="OQQ26_002774"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HCS1858176.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
                     EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
                     VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK"
     gene            complement(8733..9554)
                     /gene="dapB"
                     /locus_tag="OQQ26_002775"
     CDS             complement(8733..9554)
                     /gene="dapB"
                     /locus_tag="OQQ26_002775"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HCS1858177.1"
                     /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
                     LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG
                     TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSCEGHTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL"
     gene            complement(9721..10635)
                     /gene="rihC"
                     /locus_tag="OQQ26_002776"
     CDS             complement(9721..10635)
                     /gene="rihC"
                     /locus_tag="OQQ26_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HCS1858178.1"
                     /translation="MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
                     TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLEIP
                     AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPHIRRLVIMGGSAGRGNCTP
                     NAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALF
                     SHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTMVDIDGCLG
                     KPANVKVALDLNVKGFQQWVAEVLALVP"
     gene            complement(10700..11650)
                     /gene="ispH"
                     /locus_tag="OQQ26_002777"
                     /gene_synonym="lytB"
     CDS             complement(10700..11650)
                     /gene="ispH"
                     /locus_tag="OQQ26_002777"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HCS1858179.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
                     VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
                     NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
     gene            complement(11652..12101)
                     /gene="fkpB"
                     /locus_tag="OQQ26_002778"
     CDS             complement(11652..12101)
                     /gene="fkpB"
                     /locus_tag="OQQ26_002778"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HCS1858180.1"
                     /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
                     SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
     gene            complement(12226..12720)
                     /gene="lspA"
                     /locus_tag="OQQ26_002779"
     CDS             complement(12226..12720)
                     /gene="lspA"
                     /locus_tag="OQQ26_002779"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HCS1858181.1"
                     /translation="MSKSMCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
                     SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSK
                     AKKQ"
     gene            complement(12720..15536)
                     /gene="ileS"
                     /locus_tag="OQQ26_002780"
     CDS             complement(12720..15536)
                     /gene="ileS"
                     /locus_tag="OQQ26_002780"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HCS1858182.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
                     ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
                     QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
                     LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGTYLPGAYPTLDGVNVFKANDIVVALLQEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
                     WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH
                     RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
                     LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
                     VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
                     DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
                     ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELEAKLTALG
                     DELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVVLSKAEGEKCPRCWHYTQDVGKV
                     AEHAEICGRCVSNVAGDGEKRKFA"
     gene            complement(15579..16520)
                     /gene="ribF"
                     /locus_tag="OQQ26_002781"
     CDS             complement(15579..16520)
                     /gene="ribF"
                     /locus_tag="OQQ26_002781"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HCS1858183.1"
                     /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
                     KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
                     TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
                     GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
                     SPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
                     RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
     gene            complement(16528..16746)
                     /locus_tag="OQQ26_002782"
                     /pseudo
     CDS             complement(16528..16746)
                     /locus_tag="OQQ26_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414565.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 domain-containing protein"
     gene            16849..17112
                     /gene="rpsT"
                     /locus_tag="OQQ26_002783"
     CDS             16849..17112
                     /gene="rpsT"
                     /locus_tag="OQQ26_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HCS1858184.1"
                     /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
     gene            17592..19013
                     /gene="espX1"
                     /locus_tag="OQQ26_002784"
     CDS             17592..19013
                     /gene="espX1"
                     /locus_tag="OQQ26_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector EspX1"
                     /protein_id="HCS1858185.1"
                     /translation="MTDGISTSPHCLYKSNIVDDVIINKTRQNELVKVFCEYKTEFLI
                     LFDDFFRSHNLPKPSPVLHHFFQYTHLRDAHFYRCKLIEHTVQFSFFKHKGITLLRLD
                     VFDDTTSECLSEEIKIYQECYEKFIKFLKANFNQEIYPQLYTPEIFYEACKSLQSFYD
                     HQETSQNAKYSAIDKKKSHLNQEIKNLIKKNIYPELYNEQCMKIPASPTDDNQQITWQ
                     NFKTSNSAYSQPCEKLSLFKSVPSRLIEKSAYCSTENMITNKFDVVFSYCGDNIKEFI
                     LLLPYNKSLEMYELNEQTIQYVTTPNININKLLLSNITIKKSNLSYGYYFGCVLSNIS
                     CFESDLSNTIFSNGEINNLFIKKSNIFGTSFTNTRIKNLRCEDIMPGRWTTQLVNKHL
                     GYRYTGVFKTLASIDDKPSRFEILIPLIQTLVRDNVKLNNDVYKELNKFMHDYDKTSS
                     EMRKYLQSINECMLLIKNIVHQD"
     gene            19277..19561
                     /locus_tag="OQQ26_002785"
                     /pseudo
     CDS             19277..19561
                     /locus_tag="OQQ26_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308050.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
BASE COUNT         5002 a         5117 c         4725 g         4717 t
ORIGIN      
        1 gcgtggcgtc agtcggcttg cctgactagc gcccgcccaa taacaaacga acaaaaatgg
       61 atagaggtgc aatggatatc attggcggac aacatctacg tcaaatgtgg gacgatcttg
      121 cggacgttta cggtcataaa acggcgctga tttgtgaatc cagcggcgga gtcgttaacc
      181 ggtatagtta tcttgagtta aatcaggaga ttaaccgcac ggcaaacctg ttttatacgc
      241 tggggattcg caaaggcgac aaggttgcac tacatctcga caactgcccg gaatttatct
      301 tttgctggtt cgggctggca aaaattggcg cgattatggt gccgattaac gcccgcctgt
      361 tacgcgagga aagcgcgtgg atcctgcaaa atagccaggc gtgcctgctg gtgaccagtg
      421 cgcaattcta tcctatgtat caacagattc agcaggaaga tgccactcaa ttgcggcaca
      481 tttgcctgac agatgtggca cttcccgctg atgatggcgt gagttcgttt actcaactga
      541 aaaatcaaca acctgccacc ttgtgctatg caccgccgct atcgactgac gatacggcgg
      601 aaattctctt cacctccggc accacctccc gaccgaaagg tgtggtgatt acccattaca
      661 acctgcgctt cgctggatat tactccgcct ggcagtgtgc actgcgtgac gatgacgtct
      721 acctgacggt aatgcctgcg tttcatatcg attgctagtg tactgcagcg atggcggcgt
      781 tttctgccgg ggccaccttt gtgctggtcg agaaatacag cgcccgcgcc ttctggggac
      841 aggtgcagaa gtaccgcgcc accattaccg aatgtattcc gatgatgatc cgtacgttga
      901 tggtgcagcc gccttcagcg aacgatcggc aacaccgcct gcgggaagtg atgttttatc
      961 tcaacttgtc ggagcaggaa aaagatgcgt tttgtgaacg cttcggcgtt cgcttgctga
     1021 cgtcttatgg gatgacggaa accattgtgg gcattatcgg cgatcgccct ggcgataaac
     1081 gacgctggcc gtcgattggt cgagcggggt tttgctacga agcggagatc cgcgacgatc
     1141 acaattgccc gctcccggca ggtgagatcg gtgaaatctg tattaaaggc gtaccaggga
     1201 aaaccatctt caaagagtat tttctcaacc cgaaagccac tgcgaaagtg ctggaagccg
     1261 acggctggct acataccggc gataccggat attgcgacga agagggcttt ttttatttcg
     1321 tcgatcgccg ctgcaatatg atcaaacgcg gtggcgagaa tgtctcctgc gtggagctgg
     1381 aaaatatcat cgccacccat ccaaaaattc aggatatcgt ggttgtgggt attaaagatt
     1441 cgattcgcga tgaagccatc aaagcatttg tggtgctgaa tgaaggtgaa acattgagcg
     1501 aagaggaatt ttttcgcttc tgcgaacaaa atatggcgaa atttaaagtg ccctcttatc
     1561 tggagatcag aaaagatctg ccacgtaatt gctcggggaa aataattaga aagaatctga
     1621 aataaatgaa acggcaggga actaccctgc cagctaataa tcacgctcta aaacaatatg
     1681 cattttttgc aggaatgttg tcgtccctga aaaagcaaaa atggagaaaa ggaatgagtg
     1741 aatcattaca tctgacccgc aatggatcaa ttctggaaat tacccttgat cgcccaaaag
     1801 cgaatgctat tgatgcaaaa accagctttg aaatgggcga agtatttcta aatttccgtg
     1861 acgatccgca attacgtgtc gccattatta ccggtgccgg agagaaattc ttttccgcgg
     1921 gctgggattt aaaagcggca gcagaaggcg aagcaccgga tgctgacttt ggcccgggag
     1981 gttttgcggg attaaccgaa attttcaatc tcgacaaacc ggttatcgca gctgtgaacg
     2041 gctacgcctt tggcggcggt ttcgaactgg cgctggcggc agattttatt gtttgtgccg
     2101 ataacgccag cttcgccctg ccggaagcca aactgggcat cgttcctgac agcggcggtg
     2161 tgctgcgtct gccgaagatc ctgccgcctg ccatcgtcaa tgaaatggtg atgaccggca
     2221 gacgaatggg cgcagaagag gcgctgcgtt gggggatagt caaccgcgtg gttagccagg
     2281 cggagctgat ggataacgcc cgcgaactgg ctcagcagct ggttaacagc gccccgctgg
     2341 cgattgcggc gctgaaagag atctaccgca ccaccagcga aatgccggta gaagaagcgt
     2401 atcgctatat tcgcagcggc gtgttgaaac actatccgtc ggttctgcat tcggaggatg
     2461 ccattgaagg gccgctggcg tttgccgaga agcgcgatcc ggtgtggaaa ggacgttaac
     2521 aaccgtgagc tattacgcct ttgaggggtt aattccggtg gttcacccga cggcgtttgt
     2581 ccatcccagt gcagtcttga ttggcgatgt gattgtggga gccggtgtct acatcggccc
     2641 actcgcctca ctgcgtggtg actacgggcg gttgatcgtg caagcgggag ccaatattca
     2701 ggatggctgc attatgcatg gctactgcgg cactgacacc atcgttgggg aaaacggcca
     2761 tatcgggcac ggagcgatcc tgcatggttg tgtgattggt cgcgatgcat tggtcgggat
     2821 gaacagcgtg attatggatg gcgcggtcat tggcgaagag agcattgttg ccgccatgag
     2881 ctttgtcaaa gcaggctttc acggcgagaa acgccagttg ttgatgggta cgccagcccg
     2941 cgcggtacgc actgttagtg acgacgagtt acactggaaa cggttgaata ccaaagagta
     3001 tcaggatctt gtcgggcgct gtcatgcatc gttacatgaa acgcagccac tgaggcaaat
     3061 ggaggaaaat cgcccccgtt tgcaggggac gacggatgtg atgccgaaac ggtgatcttg
     3121 ccggatgcgg cgtaaacgcc ttatccgacc tggctggaaa gcaaccgtaa gccggataag
     3181 atgctacaac atcgcatctg gcaagcagga cgcccggtat caacgagata aaattaacga
     3241 cgcatactct ttgacaacat catctgccac ttctgctcgc ggttaagttc cgtgagcgga
     3301 acggcaggaa tacgcggtgt ctttcttacg ccgactaatt tttcccgact gttattgcgc
     3361 aggcgcgcgt aaatttgctc atcgatatcg accactttaa ccagtcgctg acactggcat
     3421 ccccgccctt ccagcttatt agggatcatc ttaacttcgc agcttatttc tgtgacttcc
     3481 gacagaatat aagtcagggt attaaccgcc ttgctgtgtt caatatcgaa atgaatagag
     3541 atctctcttg ctatcaccca ccgattttca gccatcatcc attcggcgat taacaagtag
     3601 agtggttttt caacatatcc ttcacacata cgaactccaa tttcacaaat taaaagtctg
     3661 gctatgactc gttttgaagc aattaaacaa ggccatatta aaattgtgga tatatcgata
     3721 gtatgcaact tcaccgtcga taagtgtgag ctaaatcctg cttatgtcat caaaaatatc
     3781 gattccccaa aagatttact taatgggcaa aaaaaacggt cctcatcaga gaaccgtatt
     3841 agttattcga tcaaattagc ggatgaaaaa tatccgccat gacacgctat tatttgatct
     3901 gcgcgtgcat ttcctgcacc gaaattactt tttcagtcgc atcggcattc agcgccatcg
     3961 cggtagcgaa accaccgttc agggtggtgt cataatgcac tttatattgc agcgcactgc
     4021 gacggatcac gcgggagtct tcaatcgcgc gacgacctga ggtggtgttg atgatgtagg
     4081 tatattcgcc attcttaata cggtcctgaa tgtgcggacg gccttcatgc accttgttta
     4141 ccagacgcgg attgataccc gcttcgccca gcacaatcgc cgtgccgtgc gtcgcatcca
     4201 gctcgaagcc ctgtttcagc aattttgccg ccaggtccac cacgcgttct ttatcgcctt
     4261 cgcgcacgga aagcagcgca cgaccgtgtt tcttcatggt ggagttgctg cccagctgcg
     4321 ctttggcaaa cgcttcagcg aaggtgcgac ccacgcccat cacttccccg gtggagcgca
     4381 tttctggccc taacagcggg tcaacacccg ggaatttatt gaacggcagc accacttctt
     4441 tcaccgagta gtacggcggg ataacttctt tggtaacgcc ctgctcagcc agcgatttgc
     4501 cagccatcac acgcgccgcc acttttgcca gcggtacgcc ggtggctttg gagacgaacg
     4561 gaacggtacg cgccgcacgc gggttaactt caatcaggta gacttcgttg tttttcaccg
     4621 caaactgcac gttcatcagg ccgcgcacct gcaattcgaa ggccagtttc tgcacctgtt
     4681 ggcgcatcac atcctgaatt tcctgactta aggtgtaggc tggcagagaa catgcggagt
     4741 caccggagtg cacgcccgcc tgctcgatgt gctccatgat gccgccaatc aacaccattt
     4801 cgccgtcgca gatggcatcc acgtcaactt ctaccgcgtc atcgaggaag tggtccagca
     4861 acactggcgc atcgttagac acgctgaccg ccgtctggaa gtagcgacgc aggtcagctt
     4921 cgtcatagac gatttccatc gcccgaccgc cgagaacgta agacggacgt accaccagcg
     4981 ggtagccaat ctcttttgcc ttctcaactg ccatttcaat agcagtaacg gtggcgttcg
     5041 ccggttgttt cagtttcaga cgctcaaccg catgctggaa gcgttcacgg tcttccgcac
     5101 ggtcgatagc atccgggctg gtgccgataa ccggtacgcc ggcggcttcc agtgcacgcg
     5161 ccagtttcag cggggtctga ccgccgtact gaacgataac gcctttcggc ttctcaatac
     5221 gcacgatttc cagcacatct tccagagtta ccggctcgaa gtagaggcga tcggaagtgt
     5281 cgtagtcggt agagacggtt tccgggttac agttaaccat aatagtttcg taaccgtctt
     5341 cacgcagcgc cagcgaggcg tgtacgcagc agtagtcgaa ttcgataccc tgaccgatac
     5401 ggtttggacc gccgccaagc accatgattt tttcacggtc ggtagacgga ttcgcttcgc
     5461 actcttcttc ataagtggag tacatgtaag cggtgtcggt ggcaaactct gccgcacagg
     5521 tatccacgcg cttgtagacc gggtgcaggt catactggtc acgcagctta cggatttccg
     5581 cttcgcgtac gcccgcgagt tttgccagac gcgcatcggc aaagcctttg cgtttcagct
     5641 ggcgcaggaa gtcagcgttc aggccagtga tgcccacttc cgccactttc tcttccagac
     5701 gcaccagttc ttcaatctgt accaggaacc agcggtcaat gttggtcagg ttgaagacgc
     5761 cgtccacaga caggcccgca cggaaagcat cggcgatgta ccagatacgc tctgcgcctg
     5821 cgtctttcag ttcgcgacgg attttggtta acgcttccgg gtcatcgagg ctcactttcg
     5881 ggtcgaatcc agtcgcaccg acttccaggc cgcgcagcgc tttttgcagg gattcctgct
     5941 gcgtgcgacc aatcgccatc acttcgccaa ccgatttcat ctgagtggtc agacggtcgt
     6001 tagcaccagc gaatttttcg aagttgaagc gaggaatttt agtaaccaca tagtcgatgg
     6061 acggctcgaa ggaggccgga gtacgtccgc cagtgatgtc gttcatcagt tcgtcgaggg
     6121 tgtaacccac cgccagtttc gccgccactt tagcaatcgg gaaaccggtc gctttcgacg
     6181 ccagcgccga agaacgggac acgcgtgggt tcatttcgat aacaatcagg cgaccgtttt
     6241 tcgggttcac cgcaaactgg acattggaac caccggtttc aacgccgatt tcacgcagca
     6301 ccgccatcga ggcgttacgc atgatttgat attctttgtc ggtcagcgtt tgggctggcg
     6361 cgacagtgat ggagtcaccg gtgtggatgc ccatcgcatc gaagttttcg atagagcaga
     6421 cgatgatgca gttgtcgttt ttatcacgca ccacttccat ctcgtactct ttccagccga
     6481 tcagcgactc atcaatcagc aactctttgg tcggagagag agccagaccg cgggcgcaaa
     6541 tttcttcaaa ctcttcgcgg ttataagcga taccgccacc gctaccgccc atggtaaagg
     6601 atgggcgaat aatgcacggg aagcccacgt cagcggcaac cgccagcgct tcttccatcg
     6661 tgtgtgcgat accggaacgc gcggtttcca gaccaatttt cttcatcgct acgtcgaaac
     6721 gacggcggtc ttctgcttta tcaatcgcat cggcagtggc accaatcatg gtgacgccaa
     6781 actcttccaa cacgccctga cgttccagct ccagcgcgca gttcagcgcc gtctgaccgc
     6841 ccatcgttgg cagcaccgcg tccgggcgct ctttttcaat aatcttgcgt accacttccc
     6901 agtgaatcgg ctcaatatag gtcgcatcgg ccatttccgg gtcggtcatg atggtcgccg
     6961 ggttggagtt caccagaatg acgcggtaac cctcttcgcg cagggcttta catgcttgcg
     7021 cgccagagta gtcaaactca cacgcctgac cgataacaat cgggcccgca cccagaatca
     7081 ggatactttt tatatctgta cgttttggca tggctctttt actcctgatt acttagcggt
     7141 tttacggtac tgctcaatta actcgataaa gtggtcgaac aacggcgctg cgtcgtgtgg
     7201 cccagggctg gcttcagggt gaccctggaa gctgaacgcc ggtttatcag tgcgatgaat
     7261 gccctgtaac gtaccgtcga acagggattt atgcgtgaca cgcaggtttg caggtaatgt
     7321 tgcttcatcc accgcaaaac cgtggttctg ggcggtgatc atcaccacgt ttttctccac
     7381 atctttaacc ggatggttgc cgccgtggtg accaaatttc attttgacag tcttcgcacc
     7441 gctcgccagc gccagcagct gatgaccgag acagatgccg aataccggaa tatcggtttc
     7501 gaggaatttc tggatggcgg taatggcgta atcgcacggg gccgggtcgc caggaccgtt
     7561 ggagaggaag atgccgtctg gattcatttt cagcacatct tccgcagaag tttgcgccgg
     7621 aacgatggtc aggcgacagc ctctatccac cagcatccgc aggatgttgc gcttggcacc
     7681 aaaatcataa gccacgacgt ggaacggcag ctcgtcttct tttttcgctt ctggcaggcc
     7741 gccggtcaac gtccagctcc cttgtgtcca gctataggct tctgcggtgg tcacttcttt
     7801 tgccagatcc atgccgttca gaccagggaa cgcgcgggct ttttctaacg ccagcgccgc
     7861 atccgggtta tcgcctgcga taatgcagcc attctgtgcg cctttctcgc gcagtaaacg
     7921 cgtcagctta cgggtatcga tatcggcaat cgccacgatg ttatggcgct tcaggtaaga
     7981 agagaggtct tcggtattac ggaagttgct ggcaatcagc ggcaggtcgc gaatcaccag
     8041 accttgtgca tgtacctgag aagattcttc atcggcgtca ttagtgccga cattgccaat
     8101 atggggataa gtaagagtaa cgatttgacg agaataggaa ggatcagtga ggatttcttg
     8161 ataaccggtc attgaagtat tgaaaacgac ttccccaacc gccgaacctg ttgcccctat
     8221 ggcccgaccg tgaaactggg ttccgtcttc cagaaccaat agcgctgact taatcaaaac
     8281 accctccaga gaatactaac tcactttatt tgcatattaa ttcacaatga tgacgtaaat
     8341 caatgcaaat ctgcttaccg acgaatttct ggcaaacggc ggcattctgg agatatgggc
     8401 gctaaaagtc aacttaatgg cgggattttt tatattattt tgtggctcat gcatgtttta
     8461 caggcattaa gcgacaaaaa gatcatataa cctgttctgg aaaacgcttg cgcagcaaga
     8521 agattgcatg aaataaaaac gagcaggaaa aagtggacca aatggtcaaa atttacatta
     8581 aaacaacaaa aacagaagac aaaacatgta gtttttgtca cttatagaca atttaaaaac
     8641 ataacactaa aaataaaagg gccaaaaatt aaagcccttt acaatcaata aattaaatgt
     8701 gttatttttg caccataaca aatattttgt ggttacaaac tattgagatc aagcacgtct
     8761 cgcatatcaa aaagaccact ttccttacca ctcaaccaca aagccgatct taccgcgccg
     8821 ttagcaaatg tcatgcggct ggacgcctta tgggtgatct ccagacgctc gccaatatcg
     8881 gcaaacatcg cggtatgttc gccaacgatg tcacctgcac gcacggtggc aaaaccaatg
     8941 gtgccaggca cacgttcacc ggtgtggcct tcacaactgt agaccgcgca atctttcaga
     9001 tctttatcaa gggcgtgggc gatcgcctct cccattgcca gtgcggtgcc tgacggcgca
     9061 tcaactttat gtctatgatg tgcttcaata atttcgatat cggtgtagtc acccatcact
     9121 ttggctgctt tctccagcag cttaagcatg acgttaacgc caacgctaaa attggcggca
     9181 aagacaatcg caatatcggc ggcggcgtca cgaatcgcct gtttaccggc ttcgtcaaac
     9241 cccgtagtgc cgatcaccat ccctttgcca tgctggcgac aaaaagcgag atggttcagc
     9301 gtaccttccg gacgggtaaa atcgataaac acatcaaaat catcttttac cgcatcgagg
     9361 ctgctttgca cggtaacgcc tgttttccct gcaccagcca gctcaccggc gtcgctgccc
     9421 agtaaagaag atccttcgcg ctccagcgcc gcgcccagct gcacgccttc taatgccagc
     9481 gccgcctgaa tcaactggcg gcccatacgc cccccggctc ccgcgatggc aacgcggatg
     9541 tttgcatcat gcatagctat tctcttttgt taatttgcat agaccgtttt cagagtaacc
     9601 agcgcatcgc tacgccgcca gccaaaaacg ctgataatta gaaattaatg ataaacaggg
     9661 aggaatatca gtgaaaggca tgagtcgatg aatgactgca tgccgataac atgtgacagg
     9721 ttatggcacc agagccagca cctcagctac ccactgctgg aagcctttta cattcagatc
     9781 caatgccacc tttacattgg ctggtttgcc caggcaaccg tcgatatcaa ccatcgtcgt
     9841 gcctgaggta aattcgcctt gagtttctac cgcgacaaaa cacggcttga gggtgaataa
     9901 gtccgggcgc accagccagg cgatggcgca gagatcgtgc atacgcagac cgctttgcat
     9961 actgccgcta cggtagtggc taaacagggc gtggagcatt tttccggtgc gattcaactc
    10021 cggcaaagta gcgagatagt caggggttaa tattgcctga ttggtgacat ccagaccgca
    10081 catgacaatt tcgattccgc tacggaagac acaggcagcc gcttctggat cggcagcgat
    10141 attaaactcg gcgtttggcg tacagttgcc gcgtccggca gaaccgccca tgatcaccag
    10201 acggcgaata tgcggtttgc attccgggca ttgtgaaagt aacagcgcaa tattggttaa
    10261 cgggccaatg gccaccaggg taacaggctc tggtgcacgc atcagggcat cacgaatagc
    10321 caggaatgct ggtatctcca gtggctttcg gttgtgctca acaaagtcgt agccagccat
    10381 tcccgattcg ccgtgcacag atgctgcatc acgcggtgcg cgtaccagcg gcacagcggc
    10441 tccctgggcg agcggaatct ccgcattcca gaaatgcagc agttgcaggg cgttgcgggt
    10501 ggttttctca accgagacat tacccgcgac ggtggtcatc agttgcaggt cgagttcggg
    10561 ggcaaaaatc gcggcggcaa tggcgacggc atcgtcaatg ccggggtcag tatcgaggaa
    10621 gataggtaaa cgcatgtttt ctccataaaa aatgccggta acaagacggc attttcgcat
    10681 aacttaggct gctaatgact taatcgactt cacgaatatc gacacgcagc tctttcggca
    10741 cttcgaaaac aatgttttct tcacggcctt ccagcggaat ggcttcacca ccgcccagct
    10801 gctgcaaacg tgccaccaca ttctgcacca gaatatccgg agccgatgcg cccgcagtca
    10861 cgccgacgca tttaacctct ttcacccact cttcctggat atctttcgca tcgtcaatca
    10921 aaaacgcgcg tttgcccata cgctgggcca gctccgccag acggttggag ttggaggagt
    10981 ttttcgaacc gaccaccaac acaacttccg cctgttctgc cagggcgcgt accgcttcct
    11041 gacggttagt cgtggcgtag cagatgtcat ctttgcgcgg accgacaatt ttcgggaagc
    11101 gtttacgcag cgcgtcgatc acatcagacg tgtcatccac cgacagcgtg gtctgggtca
    11161 taaaggagag cttctcttcg tttttgaccg tcagtttcca cacatcgtcc ggcgattcga
    11221 ccagatacat tcccccttcc gggttactgt actggcccat tgtcccttcc acttccgggt
    11281 gcccggcgtg accgatgaga atagattctt cgccacggcg actggcgcgg gcgacttcca
    11341 tatgcacttt ggtcaccagc ggacaggtcg cgtcaaatac cgtcaaatcg cgactttttg
    11401 cttcgttacg taccgcctga gaaacaccgt gtgcggagaa aatcaggatc gcgccgtccg
    11461 gtacttcgct aatctgctca ataaagatag ccccacgctc acgcaagcta tcgaccacat
    11521 agcggttatg taccacttcg tgacggacat atatcggtgc gccgtaaatg gccagcgcgt
    11581 tttcaacaat gctgatagcg cggtctaccc cggcacaaaa accacgcggg ttggccaaca
    11641 ggatctgcat gttacgcctc cagtgccgga tcgatttcca gcacttcaat atcaaaatga
    11701 acggtctgcc cggccagcgg atggttgaaa tcaacggtaa tggagtcgcc gttaatttcg
    11761 cggatcacgc caggcatctc actgccatcc attgcggtaa aaagcatgat tgcgccaatt
    11821 tctggctcgc ctgcatccat aaattcacgg cgggagaagt actgaatcag gtccggtgac
    11881 ggcacgccaa acgccgcatc tggctccaac gagaaggtgg ttttatcgcc cactttcagc
    11941 cccaacaggt gttgctccag cccttcagaa agagaagcat cacccaggcg gaacagcgcc
    12001 ggtttaccgt tgttgcgggt agactcggcg gtggtgccat cgtcgagttt tagcgtgaag
    12061 tgcaccagga cggcgctatt gctctgtaca gattcagaca tgcaggtttg ctcttatatt
    12121 taaggatttt tgccggatgc ggcgtaaacg ccttatccgg cctacgattt cgcagcaatc
    12181 tgtaggccgg ataagatgcg tcagcatcgc atccggcagg gtttattatt gttttttcgc
    12241 tttagaaggt aaaaaacctt ccagcacaat cagtgccgca ccgacacaga tggcagtatc
    12301 ggcaaggttg aaggtggcga agtgccagtc gccgacgtag aagtcgatca tatcgacaac
    12361 gaagccgtgc cacaggcggt cgaacaggtt gcccagcgcg ccgccaataa tcagcgcgta
    12421 agcgatattg tttagcttct gcgtggcctt cgagcgatac atcatcactg ccaggatcac
    12481 gctaatacca atcgcaatac cggcaaagaa ccaacgctgc cagccgccgc tatcggcaag
    12541 gaaactaaac gccgcgccat agttacgcgc ataatgcaga ttaagcgacg ggaacagcgg
    12601 gaccgtatcc cccagagcaa agttctggag gatcaggtat ttgctgccca gatcgataat
    12661 cagcacgact accaccagcc acagccagcg tagccctgtt gaacacatcg atttactcat
    12721 caggcaaact tacgtttttc accgtcaccg gcgacgttgc tgacacagcg gccgcagatt
    12781 tctgcgtgtt ccgccacctt gccgacatcc tgggtgtagt gccagcagcg tgggcacttc
    12841 tcgccttcgg ctttactcaa cacgactttc agccctttga gtacttcgct ctgctgtgca
    12901 tcagcaggtg cgtcgttata gtctgcaacg gtagcgccgg aggtcaacag gacaaatcgt
    12961 aattcatcgc ccagcgcggt cagtttcgcc tccagttccg gttctgcata caaggttact
    13021 gccgcttcca gcgagccacc cactttctta tcggcacgcg cttgctcaat gactttgttc
    13081 acttcgccac gcactttcaa cagctcgtcc cagaacgcat cgttcatcgc ttcactgtct
    13141 gccagaccaa acaggccttc gtaccactca ccggtaaaga cgtatttttc acgttcgccc
    13201 ggcagatagc cccacacttc atcagcggtg aaggagagga ttggtgccat ccagcgcacc
    13261 agcgcttcag cgatgtgata cagcgcagtc tggcagctac gacgcgccac gctatccgct
    13321 ttggcggtgt actgacggtc tttgatgatg tcgaggtaga aggaacccat ctcaacggag
    13381 cagaagcgca tcagacgctg taccacttcg tggaaatcgt atgcttcgta cgccttgagg
    13441 atgtcttcct gtgccgcttt cgcacaacct acggcccagc gatccagtac caccatctct
    13501 tccggtttca ccatatcttt tgccggatca aaaccgttca ggtttgccag caggaagcgc
    13561 gcggtgttac ggatacgacg atagctgtcg gcagcacgtt tcaggatctc gtcagaaacg
    13621 gccatttcac cggtgtagtc agttgatgcc acccacagac gcagaatatc cgcccccagt
    13681 ttgttcatca catcctgcgg cgaaacggtg ttgccgatgg atttagacat cttgcgcccc
    13741 tgaccatcca cggtaaagcc gtgggtcagt acctgacgat acggcgcttt gcctttcatc
    13801 gcggtggaga tcatcaaaga agacatgaac caaccacggt gctggtcaga accttccaga
    13861 tacatgtccg ctgcgtgacc ggcaaattcc ggacgcacgt caacaacaga agagtgggta
    13921 gatccggagt caaaccatac atccagcgta tccggcactt tcacgtactg atcagcttcg
    13981 tcgccgagga tctctttcgc atcgagatcc caccacgcct ggatgccatc aacttcaaca
    14041 cgttttgcca cttcttccat cagttcgagg gtacgcggat gcagctcttc agtgtctttg
    14101 tgcacgaaca gtgacatcgg tacgccccaa gtacgctgac gggagataca ccagtcagga
    14161 cggttagcaa ccatcgactc gatacgcgcc tggccccagt cagggatcca ctgcacgcct
    14221 ttgatctctt tcagtgactg cgcacgcaga cctttctgat ccatgctgac gaaccactgc
    14281 ggcgtcgcgc ggaagatgat cggcgttttg tgacgccagc agcacggata gctgtgctgc
    14341 attttctcaa cgtgcagcag cgcgcctttt tcctgcagca gcgcaacgac gatgtcgttc
    14401 gctttgaaga cgttcacgcc atccagcgtc gggtaagcgc ccggcagata agtgccgtcc
    14461 gggccaaccg ggttagcggt ttccaggccg tatttctgac cgatcacata gtcgtccggg
    14521 ccgtggccag gcgcggtgtg aacggcaccg gtaccggcat ccagggtaac gtgatcgccg
    14581 aggattgccg gaacgtcgaa gcccataaac ggatgggtaa agcgcagcaa ctcaagctcc
    14641 gcacctttta ccgtgccgag aatggtgtaa tcggtcacgc cgatacgctg cattacgctt
    14701 tcaaccagat ctttcgccag aatcacggcc tgaccgtcga tctgcaccag cgcatagtcg
    14761 aaatcaggtg caatagagat tgcgcggttc gcaggcagag tccacggcgt agtggtccag
    14821 atcaccagcg agattgggcc gttaacgttg cttacggcaa attttgcttt cagtgcatcc
    14881 tgatcgaccg cctgaaaagc aacgtcgatg gacggagaag ttttgtcgta atactcaact
    14941 tccgcttccg ccagcgcaga acggcagtca acgcaccagt gtaccggctt cgcgcctttg
    15001 tgcaggtgac cgttgccgat gattttgccc agcgcgcgga tgatgttggc ttcagttttg
    15061 aagtccatgg tcaggtacgg gtgcgaccag tcgcccagca cgcccagacg gataaagtct
    15121 ttgcgttgac cgtcaacctg ggtcgccgcg tattcgcggc acttggcgcg gaactcggcg
    15181 gcggtgaatt tctcacccgg cttaccgtat tcttgctcta ctttcagctc gatcggcaga
    15241 ccgtggcagt cccagccagg cacatacggc gagtcataac cggaaagccc tttggacttc
    15301 acgataatgt ctttcagaat cttgttaacc gagtgaccaa tatgaatgct gccattcgca
    15361 taaggagggc catcatgcag aatgaaggtt tttttgcctt ttttagccgc acggatgatg
    15421 ccgtacagat catcatcagt ccaacgcgcc agcattcccg gttcgcgctt ggcgagatcg
    15481 ccacgcatcg ggaaccctgt ttccggcaaa ttcagggttg atttatagtc actcatcaga
    15541 ttctcggttc cgtgtttcgg tttgattaca taacaggctt aagccggttt tgttagccca
    15601 aaaaattcgc gggcggttag ttcatcacgc gcaatctgcg ctttcagttc gtccagcgac
    15661 gcaaatcgct gctcattgcg tattttttta cgcagcacta cttgtatatg gcgaccgtaa
    15721 aggtccattg caacatctaa caaatgcact tccagttgct ggcgaatacc ggcaaccgtt
    15781 gggcgtgttc cgatgtttgc cacgccgggt aacggctttt caccgaggcc cagcacttct
    15841 accgcataaa cccctttcac cggggaaacc tgacggcgta gcggtacatt cgccgtcggg
    15901 aaacctatag tgcgccctaa ttcatcaccg tggactacac gcccggagat ggcaaacggg
    15961 tgccccagta aactttctgc cagagccaga ttgtcatccg ccagcgcctg acgcacagcg
    16021 gtgctgctaa tacgcacgcc accttcgcaa aaagtttgcg tactagtgat atcgaagccg
    16081 tattccatgc cagctttctg taataacaag aaatcgcctt cacgaccagc gccaaagcgg
    16141 aaatcatccc ctacggcaag aaattttacg cgcaaatgct tcaccagaag atcgctgatg
    16201 aaattttgcg cggttaacgc cgcgaaacgc ctgtcgaaac gcacgcacag cacgtaatca
    16261 acgccacact ctgcaaggta acgcagtttt tcccgcagcc gggtcagtct tgccggggct
    16321 ttatcggtag caaacagttc cagtggttga ggttcaaaaa gcatcaccat caccggtaag
    16381 ttgcgcttgc gcccttcttc ctgcaagccc tgtaacagcg cgcgatgacc gcgatgcacg
    16441 ccgtcgaaat taccaatagt cagcacacac ccttcttgcg gggcctggct gagattatgt
    16501 atgccgcgta tcagcttcat gtctggctca aaacagtgaa aatcgtccga gtataccttg
    16561 tacagcggtc aaggttaacc ggcgattgag taccgaaatc agaaagaagt ggcttttcat
    16621 tgccatggcg caaatcacgg gaagaaagtg accgcctgct gcaattttta tcgcggaaaa
    16681 gctgtattca caccccgcaa gctggtagaa tcctgcgcca tcactacgta actagtgccg
    16741 acacattaac ggcgcttatt tgcacaaatc cattgacaaa agaaggctaa aagggcatat
    16801 tcctcggcct ttgaattgtc catatagaac acatttggga gttggacctt ggctaatatc
    16861 aaatcagcta agaagcgcgc cattcagtct gaaaaggctc gtaagcacaa cgcaagccgt
    16921 cgctctatga tgcgtacttt catcaagaaa gtatacgcag ctatcgaagc tggcgacaaa
    16981 gctgctgcac agaaagcatt taacgaaatg caaccgatcg tggaccgtca ggctgctaaa
    17041 ggtctgatcc acaaaaacaa agctgcacgt cataaggcta acctgactgc acagatcaac
    17101 aaactggctt aatcgccaat ttgctgaagc tttgtgaaaa agcccgcgca agcgggtttt
    17161 tttatgcctg ctgctttttt tgatgcgtga gagaacacac tgccggttgc cagatagtca
    17221 aaagatgctg gttcttgcag acctgccgtt acactatctg aactcttcgt ggcttaaaaa
    17281 tcgtagaatc atcggttgat acattctgaa caagaatatc tactcaatct tcagactccc
    17341 ctacacagaa tgtggatatt gtgatacaca ttgaggtatt aaacttaaga ccactctatt
    17401 tttgaattaa attcctatac actttaacca ttcatgaata tctccttatt agatcttgta
    17461 aattattaac agcaatcaac acaggttaaa tatctattta tattgtactt cttaaaatta
    17521 atgagcgatt tttgatagta gtcacattca ctcataaatt aataaaaatt catcaacttc
    17581 aaggactgat aatgacagat ggtatctcaa cttcgccaca ttgtctttat aaatcaaata
    17641 tagtagatga tgtaataata aataaaacaa gacaaaatga gttagtaaaa gtattttgcg
    17701 agtataaaac agagttctta attttgtttg atgacttttt tagaagccat aacttgccta
    17761 aaccatctcc agtccttcat catttttttc aatatactca tctgagagat gcacattttt
    17821 atagatgtaa actcatagaa catacagttc aattttcatt ttttaaacac aaaggcatca
    17881 cattacttag attggatgtt tttgatgaca caacaagcga atgtctttct gaagagatta
    17941 agatatatca agaatgctat gaaaaattca ttaagttttt aaaggcaaac ttcaaccagg
    18001 aaatataccc acagctatat actcctgaaa tattttatga ggcctgcaaa agtctccagt
    18061 cattttatga tcatcaggag acgtcacaaa acgctaaata cagtgcaata gacaagaaaa
    18121 aaagtcatct taaccaggaa atcaaaaatc taattaaaaa gaatatttat cctgaactat
    18181 acaatgaaca atgcatgaaa atccccgcct caccgacaga tgataaccag caaataacat
    18241 ggcagaattt taaaactagc aattcggcat attcacaacc atgtgaaaaa ttatctttat
    18301 ttaaaagcgt gcccagtcgg ttaatagaaa aatcagctta ctgttcaact gaaaacatga
    18361 tcaccaataa atttgatgtt gtcttttctt actgcggaga taatataaag gaatttatac
    18421 ttttattacc ctataataaa tcgctggaga tgtatgaact taacgagcaa acgatccagt
    18481 atgtgactac ccctaatatt aatataaata aactgttgct atcaaatata acaataaaaa
    18541 agagcaacct ttcatatggg tattattttg gttgtgtatt atccaatata tcatgttttg
    18601 aaagcgactt atcaaacacc atcttttcaa atggtgaaat aaataacctc ttcattaaaa
    18661 aaagcaacat atttggaaca tcgttcacta ataccaggat aaaaaatttg cgctgtgaag
    18721 atattatgcc aggtcgatgg accactcaac ttgtcaataa gcacttaggt tacagataca
    18781 caggagtatt caaaaccctg gcaagtattg atgacaaacc gtcccgtttc gaaattttga
    18841 taccattgat acaaacttta gttcgcgaca atgtaaagct aaataatgat gtgtataaag
    18901 aacttaataa gtttatgcac gattacgaca aaacatcatc agaaatgaga aaataccttc
    18961 agagcatcaa cgagtgcatg ctccttataa aaaatatagt tcatcaggat taaaacactc
    19021 aaagaaagag gtaatttcag aatgaaatta tctgtgatga ttattaatac actgcagaga
    19081 aataaaaaac aatctgaagc atgctctgaa acatcctact ctgtcactct aatgatggca
    19141 ccttgctctt cttataaaga agggaacaat taagaatatt aaattttcaa accttcatca
    19201 acttcacatc aagaaattta aaaaattaaa cattaatcta aataataaca acctgatcac
    19261 ataatcgggt ttgaaacaag aaagtttatt ttatctaaat gttctggata tccccctcaa
    19321 aaaaatgcag aaaaaacaaa atcaaacttg cattgcaaaa ccgtataaag ttactttggc
    19381 gtccaagcgg aatcgctcca gtagataaaa aaagcttttc tcaattaaat atcaaaaaga
    19441 aaaataatgc catctcaata aacaacgaaa cacccaactg gataacgatt acaactatca
    19501 aagcacaaaa cgtgaaagtt aataatgaaa gtatcttact acctccattt tcgaacaacg
    19561 a
//
LOCUS       DAJVTL010000083        19287 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.084, whole genome shotgun sequence.
ACCESSION   DAJVTL010000083 DAJVTL010000000
VERSION     DAJVTL010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19287
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.084"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            233..788
                     /locus_tag="OQQ26_002786"
                     /pseudo
     CDS             233..788
                     /locus_tag="OQQ26_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417738.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
     gene            complement(764..1021)
                     /locus_tag="OQQ26_002787"
     CDS             complement(764..1021)
                     /locus_tag="OQQ26_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HCS1858186.1"
                     /translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF
                     TGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP"
     gene            complement(1018..1836)
                     /gene="aroE"
                     /locus_tag="OQQ26_002788"
     CDS             complement(1018..1836)
                     /gene="aroE"
                     /locus_tag="OQQ26_002788"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HCS1858187.1"
                     /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
                     NTLNAFFRAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTD
                     GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
                     LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKG
                     KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
     gene            complement(1841..2413)
                     /gene="tsaC"
                     /locus_tag="OQQ26_002789"
     CDS             complement(1841..2413)
                     /gene="tsaC"
                     /locus_tag="OQQ26_002789"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HCS1858188.1"
                     /translation="MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVM
                     RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPST
                     TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
                     AFPVVPGETGGRLNPSEIRDALTGELFRQG"
     gene            complement(2418..2960)
                     /locus_tag="OQQ26_002790"
     CDS             complement(2418..2960)
                     /locus_tag="OQQ26_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HCS1858189.1"
                     /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV
                     RPLKSSADGHIVKVLEGQVCPVCGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDET
                     AITCPQCRTGHLVQRRSRYGKTFHFCDRYPECQFAINFKPIAGECPECHYPLLIEKKT
                     AQGVKHFCASKQCGKPVSAE"
     gene            complement(2989..3462)
                     /locus_tag="OQQ26_002791"
     CDS             complement(2989..3462)
                     /locus_tag="OQQ26_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HCS1858190.1"
                     /translation="MFDVLMYLFETYIHTEAELRVDQDKLAQDLTDAGFEREDIYNAL
                     LWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLET
                     REMVIERVLALDNAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            complement(3434..4558)
                     /gene="dprA"
                     /locus_tag="OQQ26_002792"
     CDS             complement(3434..4558)
                     /gene="dprA"
                     /locus_tag="OQQ26_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HCS1858191.1"
                     /translation="MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGL
                     TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL
                     HALHSFQLAVVGSRAHSWYGERWGRLFCETLAKHGVTITSGLARGIDGVAHKAALQVN
                     GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGL
                     SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
                     EEILENLQFGLHWLPDAPENSFYSPDQEDVALPFPELLANVGDEVTPVDVVAERAGQP
                     VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
     gene            4688..5197
                     /gene="def"
                     /locus_tag="OQQ26_002793"
     CDS             4688..5197
                     /gene="def"
                     /locus_tag="OQQ26_002793"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HCS1858192.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
                     RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
                     KLDRLKARA"
     gene            5212..6159
                     /gene="fmt"
                     /locus_tag="OQQ26_002794"
     CDS             5212..6159
                     /gene="fmt"
                     /locus_tag="OQQ26_002794"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HCS1858193.1"
                     /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
                     KKLMPSPIKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLKM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
                     AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS
                     LSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
                     TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLV"
     gene            6205..7494
                     /gene="rsmB"
                     /locus_tag="OQQ26_002795"
     CDS             6205..7494
                     /gene="rsmB"
                     /locus_tag="OQQ26_002795"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709076.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HCS1858194.1"
                     /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
                     QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
                     VEGAIAIKRPQLKGLINGVLRQFQRRQEELLAEFNTSDARYLHPSWLLKRLQKAYPEQ
                     WQSIVEANNQRPPMWLRINRTQHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
                     ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV
                     DIDEQRLSRVYANLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH
                     PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
                     TADAELCETGTPEQPGKQNQPGAEEGDGFFYAKLIKK"
     gene            7516..8892
                     /gene="trkA"
                     /locus_tag="OQQ26_002796"
     CDS             7516..8892
                     /gene="trkA"
                     /locus_tag="OQQ26_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HCS1858195.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            9022..9432
                     /gene="mscL"
                     /locus_tag="OQQ26_002797"
     CDS             9022..9432
                     /gene="mscL"
                     /locus_tag="OQQ26_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HCS1858196.1"
                     /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL
                     NRKKEEPAAAPAPTKEEVLLTEIRDLLKEQNNRS"
     gene            complement(9429..9646)
                     /gene="arfA"
                     /locus_tag="OQQ26_002798"
                     /pseudo
     CDS             complement(9429..9646)
                     /gene="arfA"
                     /locus_tag="OQQ26_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588467.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor ArfA"
     gene            complement(9702..10127)
                     /gene="zntR"
                     /locus_tag="OQQ26_002799"
     CDS             complement(9702..10127)
                     /gene="zntR"
                     /locus_tag="OQQ26_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HCS1858197.1"
                     /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD
                     LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC"
     gene            complement(10138..10506)
                     /locus_tag="OQQ26_002800"
     CDS             complement(10138..10506)
                     /locus_tag="OQQ26_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HCS1858198.1"
                     /translation="MWLLDQWAERHIAEAQAKGEFDNLTGSGEPLILDDDSHVPPELR
                     AGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGL
                     STDFLRGDYADKLLNKINDN"
     gene            complement(10612..10995)
                     /gene="rplQ"
                     /locus_tag="OQQ26_002801"
     CDS             complement(10612..10995)
                     /gene="rplQ"
                     /locus_tag="OQQ26_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HCS1858199.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKAEAAAE"
     gene            complement(11036..12025)
                     /gene="rpoA"
                     /locus_tag="OQQ26_002802"
     CDS             complement(11036..12025)
                     /gene="rpoA"
                     /locus_tag="OQQ26_002802"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HCS1858200.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVIEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            complement(12051..12671)
                     /gene="rpsD"
                     /locus_tag="OQQ26_002803"
     CDS             complement(12051..12671)
                     /gene="rpsD"
                     /locus_tag="OQQ26_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HCS1858201.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
     gene            complement(12705..13094)
                     /gene="rpsK"
                     /locus_tag="OQQ26_002804"
     CDS             complement(12705..13094)
                     /gene="rpsK"
                     /locus_tag="OQQ26_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HCS1858202.1"
                     /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            complement(13111..13467)
                     /gene="rpsM"
                     /locus_tag="OQQ26_002805"
     CDS             complement(13111..13467)
                     /gene="rpsM"
                     /locus_tag="OQQ26_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HCS1858203.1"
                     /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
                     ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            complement(13614..13730)
                     /gene="rpmJ"
                     /locus_tag="OQQ26_002806"
     CDS             complement(13614..13730)
                     /gene="rpmJ"
                     /locus_tag="OQQ26_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HCS1858204.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            complement(13762..15093)
                     /gene="secY"
                     /locus_tag="OQQ26_002807"
     CDS             complement(13762..15093)
                     /gene="secY"
                     /locus_tag="OQQ26_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HCS1858205.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            complement(15101..15535)
                     /gene="rplO"
                     /locus_tag="OQQ26_002808"
     CDS             complement(15101..15535)
                     /gene="rplO"
                     /locus_tag="OQQ26_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HCS1858206.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            complement(15539..15718)
                     /gene="rpmD"
                     /locus_tag="OQQ26_002809"
     CDS             complement(15539..15718)
                     /gene="rpmD"
                     /locus_tag="OQQ26_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HCS1858207.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
                     RGMINAVSFMVKVEE"
     gene            complement(15722..16225)
                     /gene="rpsE"
                     /locus_tag="OQQ26_002810"
     CDS             complement(15722..16225)
                     /gene="rpsE"
                     /locus_tag="OQQ26_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HCS1858208.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            complement(16240..16593)
                     /gene="rplR"
                     /locus_tag="OQQ26_002811"
     CDS             complement(16240..16593)
                     /gene="rplR"
                     /locus_tag="OQQ26_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HCS1858209.1"
                     /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            complement(16603..17136)
                     /gene="rplF"
                     /locus_tag="OQQ26_002812"
     CDS             complement(16603..17136)
                     /gene="rplF"
                     /locus_tag="OQQ26_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HCS1858210.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     INLSLGFSHPVDHQLPAAITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRTKEAKKK"
     gene            complement(17149..17541)
                     /gene="rpsH"
                     /locus_tag="OQQ26_002813"
     CDS             complement(17149..17541)
                     /gene="rpsH"
                     /locus_tag="OQQ26_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HCS1858211.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            complement(17575..17880)
                     /gene="rpsN"
                     /locus_tag="OQQ26_002814"
     CDS             complement(17575..17880)
                     /gene="rpsN"
                     /locus_tag="OQQ26_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HCS1858212.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            complement(17895..18434)
                     /gene="rplE"
                     /locus_tag="OQQ26_002815"
     CDS             complement(17895..18434)
                     /gene="rplE"
                     /locus_tag="OQQ26_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HCS1858213.1"
                     /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            complement(18449..18763)
                     /gene="rplX"
                     /locus_tag="OQQ26_002816"
     CDS             complement(18449..18763)
                     /gene="rplX"
                     /locus_tag="OQQ26_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HCS1858214.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAAIGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            complement(18774..19145)
                     /gene="rplN"
                     /locus_tag="OQQ26_002817"
     CDS             complement(18774..19145)
                     /gene="rplN"
                     /locus_tag="OQQ26_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015817037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HCS1858215.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
BASE COUNT         4875 a         4982 c         4586 g         4844 t
ORIGIN      
        1 ttgttacgac catcctgtga agtgtttcac gttgtcgtct caacggaggc gcattatagg
       61 gatcccaatt ttttgcacaa gtattttttt gatctttttt tctgtttgtt gttttttcac
      121 cctttttgct gcaatcgcac acaaaacggt gcttttttgc atactaaaag acttgcacaa
      181 ggccaataat gcccccaaag tcattagtaa atcatttatt gctgaggtaa gtatgtctga
      241 tgttttacgc ccataccgcg atctttttcc acaaatcggt cagcgcgtaa tgatcgacga
      301 tagcagtgtc gtgattggtg acgttcgtct ggctgatgat gtggggatct ggccgctcat
      361 tgtgattcgt ggagatgtac attatgtaca gatcggagca cgcaccaata tccaggatgg
      421 cagtatgttg catgtcactc ataaatcctc gtacaaccca gatggcaacc cattaaccat
      481 tggcgaagat gtcactgttg gtcacaaggt gatgctccac ggctgcacca ttggcaatcg
      541 agttttggtt gggatgggct caatctttac ttgatggcgc aatagtagaa gatgatgtga
      601 tgattggtgc gggtagtctg gtcccacaaa ataaacggct ggagagcgga tatctgtatc
      661 tcggtagccc cgtcaaacag atccgcccgt taagtgatga agagaaggct gggttacgct
      721 attccgcgaa taattacgtg aaatggaagg acgaatatct ggatcagggt aaccagaccc
      781 agccttgatc atcttcactt tgttcctgaa ttaagttttc cgcttcttct tccaggtccc
      841 agcgatgctg acgaaaactc gctaaccact gttctggcgt atctccagta aagcgatacg
      901 ccagactctc gccagagatc gcgcatgtca gttgcatacc attcacgaga gcgggaaaac
      961 atacacattt tttattctcg tcccactctt ccctgtccgg aaactggatg gcctgattca
     1021 cgcggacaat tcctcctgca attgctttat aactggttct acgtcaggca gaacaccgtg
     1081 ccagagaaga aaggcatgag ccgcctgtgc caccagcatt cctaaaccat cagcattacg
     1141 ctttgagcct cgctgctcac accatgccag aaaaggagtt tttcctttct gatagaacat
     1201 gtcatagcaa taaatgcctg gatgaatgag cgatgacggg atcgccggaa tatcaccact
     1261 gatgccactg gatgttgcat taataatgag atcaaactca tgaccttcca gttcgtccat
     1321 acccaacgcc tgaatactgc cagtgtgcgc aaacaattta gccaactctt ccgcgcggga
     1381 taccgtccga ttagtgattg tcaccgcaca gtccagggaa agaagtggca gtagtacgcc
     1441 gcgagatgct ccaccagcgc cgatgagcag aatacgtaaa ccaggacgga taaaagacag
     1501 acgttccaga tcgcttaaca agcctacacc atcggtattg tcacccagca agcgtccatc
     1561 ttctaaccgc ttgagggtgt taacagcacc agccaacgct gcccgttcag taagctcatc
     1621 cgctctggca aaagcctctt ctttaaaagg caccgtcaca ttcgcacctt taccaccagc
     1681 acgaaagaaa gcgttcagtg tgttgatgaa atcattgatg ggtgccaaca cgcgcccata
     1741 gggatgttca atattcagtt gctgagcaaa ttgctgatga atgaatggcg atttgctgtg
     1801 ggctatcgga ttaccaaaaa cagcataggt ttccattatg ttacccctgt cgaaacagtt
     1861 cacccgtcag ggcatcgcgg atttctgaag gatttaaacg cccccccgtt tcaccaggca
     1921 caaccgggaa cgccgcgcca aattgtgcgc gaacttcgtc tactgttcga caaggtggca
     1981 atccactcaa gttggcactg gtagaaacca gcggtttacc ataagcttgg cacaaagcaa
     2041 ccaccaacgg atggtcggtg actcgtacag caagcgaatc aaagcggccc gtcaaccagc
     2101 gcggtgttgt cgaaggcgcg ggaaagacaa aggtgacagg acctggccag cgggaaaaaa
     2161 tggtttcacg ctgcgcatca gtcagcatgg tgtcatcaat atagggttta agctgctcgt
     2221 aatttgccgc gattaaaatc agccccttat caaccggacg ctgttttaac tccaacagtc
     2281 gcatcactgc tgtttcgcta tcaggatcgc acccgacgcc gaaaacggct tccgttggat
     2341 aggcgatgac acgttcttca ttgaggacat ctatcgcagc tgcgatagcg tctccttgca
     2401 ggttattatt cacgttatta ttccgccgaa accggctttc cacattgttt actggcacaa
     2461 aagtgtttta caccctgcgc ggttttcttt tcgatgagta gcggataatg acactcaggg
     2521 cattctccag ctatgggttt gaagttaatg gcaaattgac actccgggta gcgatcacag
     2581 aagtgaaatg ttttgccata acgggagcgg cgctggacca gatggcccgt ccgacattgg
     2641 gggcatgtaa ttgctgtttc gtccggttta tcgataagtt cggtatgttc gcattcaggg
     2701 tagttactgc aaccaataaa cataccaaag cgtccctggc gtaataccag atttgcgcca
     2761 catacggggc aaacctgccc ctccagaact ttgacaatat gtccatccgc tgaagatttc
     2821 agaggacgga cgtagtcaca cgccggatac tgtgagcagc caagaaacgg accgtgtttc
     2881 ccggatcgaa taaccagttc agccccgcac tttgggcagg actcattatt acgcaccgtg
     2941 aacagtgctg atttcgccat aacaacttat gctgaattaa agaaatgatt aatgcagcat
     3001 accttcattc acttcaaaga gtaattcttc catttgctgg tacgcatttt cgcagcccgg
     3061 aatattgaac aacaccatca ggattaccca tttcaggtct tccaggtcga actctgcgtt
     3121 atccagcgcg agcactcgct ctatcaccat ttcacgagtt tcaaggttga gcacctgaat
     3181 ctgctcaagg aaaagcagaa acccacggca gctggcatcc agtcgttcac actcttccgg
     3241 tgtataaata cgcatggaga gaggatccga ggccagttgc atcggttctg ccaacccttc
     3301 ctgataatca gcaagttttt ccagccatag cagggcattg tagatatctt ctcgctcaaa
     3361 acctgcgtcg gtaagatcct gtgcaagttt gtcttgatcc acacgcaact cagcttctgt
     3421 gtgaatatag gtttcaaaca aatacattag tacgtcgaac atggcatgcc ctcctcaatc
     3481 ggacatagcc gccgggtaca gctgcgatcc atcctgctaa ctccagttcg agtagttgag
     3541 taactacctc tggcacaggt tggccggcac gttcagcgac gacgtcaaca ggtgttacct
     3601 catctcctac gttagccagg agctcaggaa atggcaatgc cacgtcttcc tgatctggtg
     3661 aataaaatga attttcaggg gcgtctggca accagtgcaa tccaaattgc aagttttcca
     3721 gaatttcttc cggttccgtc acaagaatcg caccttgttt tattaaccag tgaggccctt
     3781 cgcttcccgg attccctatt ggacctggca aggcaaaaac ttctcgcccc tgctcaagcg
     3841 cacaacgtgc tgtcaccagc gaaccactac gcaaagccgc ttccaccacc agtacacctt
     3901 tacttaaacc actgataatg cgatttcttc gtgggaaatt gtaagcaagg ggtggaacat
     3961 cgaggggaaa ttccgagacg agagcgcccc cctgttcaag cagactggca gccagtcggg
     4021 catgacggcg gggatgaatg gtattaagtc cattccccaa tacagcaatg ctgacgccat
     4081 ttacctgtaa ggctgcttta tgcgctacac catcgattcc acgcgccagt ccactcgtaa
     4141 ttgtcactcc atgcttcgcc agagtttcgc aaaataatcg tccccatcgc tcgccatacc
     4201 atgaatgcgc ccgactcccc actacggcaa gctgaaatga atgcagcgcg tgcagttctc
     4261 cttcaacaaa cagtgcgccg gggtaatctg tcgtcgccag aagttgagga ggataaaatt
     4321 cgctgtccgc agggattaaa tgatggttgg gttgctccaa ccaacaaagt gagctttcga
     4381 tactctttcg tggaaatgaa agaaagcgtt gtgcctgccg caatgtaagc cctgtttgct
     4441 gcaatacaac cgcatcaata tgcgactgtt ttgccaccca gtgagcgata cggaccatat
     4501 catcgccgta caagctgctg atactcatta aacgcagcca aatttctgta tcgaccatcc
     4561 ttatctccct gccataagca gccttagcaa tctttgcgat tggtcagtga tgctgtcaat
     4621 cagaggggga tttgtctaga atagaagaaa taatctttct aactcctgaa cacatctctg
     4681 gagatttatg tcagttttgc aagtgttaca tattccggac gagcggcttc gcaaagttgc
     4741 taaaccggta gaagaagtga atgcagaaat tcagcgtatc gtcgatgata tgttcgagac
     4801 aatgtacgca gaagaaggta ttggcctggc ggcaacccag gttgatatcc atcaacgtat
     4861 cattgttatt gatgtttcgg aaaaccgtga cgaacggctg gtgttaatca atccggagct
     4921 tttagaaaaa agcggcgaaa caggcattga agaaggttgc ctgtcgatcc ctgaacaacg
     4981 tgctttagtg ccacgcgcag agaaagttaa aattcgcgcc ctggaccgcg acggtaaacc
     5041 atttgaactg gaggcagatg gtctgttagc catctgtatt cagcatgaga tggatcacct
     5101 ggtcggcaaa ctgtttatgg attatctgtc accgctgaaa caacaacgta ttcgtcagaa
     5161 agttgaaaaa ctggatcgtc tgaaagcccg ggcttaagga taagaactaa cgtgtcagaa
     5221 tcactacgta ttatttttgc gggtacacct gactttgcag cgcgtcatct cgacgcgctg
     5281 ttgtcttctg gtcataacgt cgttggcgtg ttcacccagc cagaccgacc ggcaggacgc
     5341 ggtaaaaaac tgatgcccag cccgattaaa gttctggctg aggaaaaagg tctgcccgtt
     5401 tttcaacctg tttccctgcg tccacaagaa aaccagcaac tggtcgccga tttgcaggct
     5461 gatgttatgg tcgtcgtcgc ctatggttta attctgccta aagctgtgct gaagatgccg
     5521 cgtcttggct gtatcaacgt tcatggttca ctgctgccac gctggcgcgg tgctgcacca
     5581 atccaacgct cactatgggc gggtgatgca gaaactggtg taaccattat gcaaatggat
     5641 gttggtttag acaccggtga catgctctat aagctctcct gcccgattac tgcagaagat
     5701 accagtggta cgctgtacga caagctggca gagcttggcc cacaagggct tatcaccacg
     5761 ttgaaacaat tggcagacgg cacggcgaaa ccagaagttc aggacgaaac tcttgtcact
     5821 tacgccgaga agttgagtaa agaagaagcg cgtattgact ggtcactttc ggcagcacag
     5881 cttgaacgct gcattcgcgc tttcaaccca tggccaatga gctggctgga aattgaagga
     5941 cagccggtta aagtctggaa agcgtcggtc attgatacgg caaccaacgc tgcaccagga
     6001 acgatccttg aagccaacaa acaaggcatt caggttgcga ctggtgatgg catcctgaac
     6061 ctgctctcgt tacaacctgc gggtaagaaa gcgatgagcg cgcaagacct cctgaactct
     6121 cgtcgggaat ggtttgttcc gggcaaccgt ctggtctgat agtccactct tctaagcccg
     6181 gtcttgccgg gcatttttat acttatgaaa aaacaacgta atttacgtag catggcggcc
     6241 caggccgttg aacaagtcgt cgagcaaggg caatcattaa gcaacattct gccaccgctc
     6301 cagcaaaaag tttccgataa agacaaagca cttcttcaag agttgtgctt tggcgtactg
     6361 cgtacgcttt cgcagttaga ctggctgatt aataagttaa tggcccgtcc gatgaccggc
     6421 aaacagcgca ctgtgcatta cctgattatg gttggtttgt atcaactgct ttatacccgc
     6481 attccacctc atgctgcgct ggctgaaacg gttgaaggcg ctatcgcaat taagcgtccg
     6541 caacttaaag ggttgattaa cggtgtatta cgccagttcc agcgtcggca agaagagtta
     6601 ttagccgagt ttaataccag tgatgcacgt tatctgcatc cttcctggtt gctgaagcgt
     6661 ctgcaaaaag cgtatccaga gcagtggcaa tccatcgtcg aagccaataa ccagcgtccg
     6721 ccaatgtggc tgcgtattaa tcgtacgcag cattcccgcg acagttggct tgcattgctg
     6781 gatgaagcag gaatgaaagg tttcccgcat gcggattacc ctgatgctgt acggctggaa
     6841 acacctgcac ctgttcatgc gctacctggt tttgaagacg gatgggttac cgttcaggat
     6901 gcatcagcac aaggttgcat gacctggctt gcgccacaaa acggtgaaca catcctggat
     6961 ctttgtgccg cccccggcgg taaaacaacg catatccttg aggtggcacc agaagcgcag
     7021 gttgttgcgg ttgatattga cgaacagcgc ctctctcgcg tttacgccaa tttaaaacgc
     7081 cttggtatga aggcaaccgt gaaacaaggt gatggccgtt acccttccca atggtgtggc
     7141 gagcaacagt ttgatcgcat tttattagat gcgccttgtt cagcaacggg ggtgattcgt
     7201 cgccatccag atattaaatg gttacgtcgc gatcgcgata tcccggaact cgcgcaattg
     7261 cagtctgaaa ttctcgacgc catttggccg catttaaaat ccggtggaac cctggtctat
     7321 gccacctgtt cggtgttacc ggaagagaat agcctgcaga ttaaagcctt tttgcaacgt
     7381 accgctgatg ccgaactttg cgaaacagga acaccagagc aaccgggtaa acaaaatcag
     7441 cctggtgccg aagagggcga cggcttcttt tacgctaagc taatcaaaaa gtgatgagat
     7501 aacgggtcgc gactgatgaa aattatcatt ctgggtgccg gccaggttgg cggcacactg
     7561 gcggaaaacc tggttggcga gaacaacgat attactgttg tcgataccaa cggtgagcgt
     7621 ctgcggacct tgcaggataa atttgacctg cgagtcgtgc aggggcatgg ctctcatcca
     7681 cgcgtattgc gggaggcagg tgccgacgac gccgatatgc tggttgctgt aaccagttca
     7741 gatgaaacca atatggttgc ctgccaggta gcctactcac ttttcaacac ccctaatcgc
     7801 atcgctcgca tccgctcacc agactacgta cgcgatgccg ataagctatt tcattcagat
     7861 gctgtaccga ttgatcatct gatcgcacca gagcagttgg ttatcgataa tatttaccga
     7921 ctgattgagt atccaggcgc attgcaggtg gtgaacttcg ctgagggtaa agtcagcctc
     7981 gctgtagtta aagcctatta tggcggcccg ctgattggta atgcactttc gaccatgcgc
     8041 gaacatatgc cacatatcga tactcgtgtg gcagcaattt tccgccacga tcgccccatt
     8101 cgtccacaag gttcgaccat tgttgaagct ggtgatgaag tgttctttat tgccgcttca
     8161 cagcatatcc gcgcggtgat gagtgaatta cagcgactgg aaaaaccgta taagcggatc
     8221 atgctggttg gtggcggtaa tatcggtgca gggctggcgc gtcgtctgga aaaagattac
     8281 agcgttaaac tcatcgaacg taatcagcag cgcgctgccg aactggcgga aaagttgcag
     8341 aatacgatcg tcttttttgg tgatgcgtcg gatcaagaac tgctggccga agaacatatc
     8401 gatcaagttg atctgtttat tgccgtcacc aacgatgacg aggccaatat catgtccgcc
     8461 atgcttgcca aacgtatggg tgcgaaaaag gtgatggtat tgatccagcg tcgcgcttat
     8521 gtggatctgg ttcaggggag cgtgatcgat attgcaattt caccacaaca agcaactatt
     8581 tctgcgttgc ttagccatgt gcgaaaagca gatattgttg gtgtttcctc attgcgccgc
     8641 ggcgtagcag aagctattga agccgttgct cacggtgatg aaagcacctc acgcgttgtc
     8701 ggcagagtca ttgacgaaat caagctaccg ccaggaacga ttattggagc ggtggtacgt
     8761 ggaaacgacg tgatgattgc caatgacaat ctgcgcattg agcaaggcga tcacgtaatt
     8821 atgttcctca cagataaaaa gtttattacc gacgtcgaaa gactcttcca gccaagccct
     8881 ttcttcttgt aattaataag gcgtctaatg acgccttatt atttcccttt gattatcaag
     8941 gattaattaa attcattcct ggcaggaaaa tggcttaaca tttgttagac ttatggttgt
     9001 cggcttcata gggagaataa catgagcatt attaaagaat ttcgcgaatt tgcgatgcgc
     9061 gggaacgtgg tggatttggc ggtgggtgtc attatcggtg cggcattcgg gaagattgta
     9121 tcttcactgg ttgccgatat catcatgcca cctctgggct tattaattgg cgggatcgac
     9181 tttaaacagt ttgctgtcac gctacgcgat gcgcaggggg atatccctgc tgttgtgatg
     9241 cattacggtg tcttcattca aaacgtcttt gattttctga ttgtggcctt tgccatcttt
     9301 atggcgatta agctaatcaa caaactgaat cggaaaaaag aagaaccagc tgccgcacca
     9361 gcaccaacta aagaagaagt attactgaca gaaattcgtg atttgctgaa agagcagaat
     9421 aaccgctctt aacaaacacc tgaaagcaga aggccagtgg taaaaaagtg atttactttc
     9481 ttgccactgg cctcccagtt cccccgattg ccatgttttc cttttcgcat gtaactgcct
     9541 ttcctttctt atttttctct actcgctgtc ggaataaggg atcatgtagt aatgcttcta
     9601 tcgcattatc ctttatctgc gctttagtat gctgatatcg gctcataaaa actccagttg
     9661 gttatttaac ggcgcgagtg taatcctgtc agtgcaaaaa atcaacagcc actcttaacg
     9721 ccactcgccc cttgttcaag agcttcaaga atcgagcaat aaacactgct atgggcggtc
     9781 ccacaacagg catcgttaag gcgttgcaag gaacgctgca tactctgcaa ctcggctatc
     9841 cgtgcttcga cttcctgcaa tctttcctgc acaatgcctt ttgactcctg acaggtatgg
     9901 tgttcaggat cgatacggat cgacagcaac tcgcggatcg actccagact gaaacctagt
     9961 tgtctggcat ggcggataaa tttcaatcgc tggagatcgc tttcggtata caggcgaaac
    10021 ccaccttcgg tacgcacttc atgctccatc atctgctgct tttcgtaata acgaatcgtg
    10081 tcgggtgtta cttccgccat ttttgccagc tcaccaatgc gatacataca tactccacta
    10141 gttatcgttg attttattca acaacttgtc agcataatcg ccgcgtaaaa aatcggtact
    10201 caatccagct tgtcgcagct tcaattccag taatgacaat cgacggctaa cctcttgata
    10261 ttgcggatca tcgtgacgga tacctttgag aatatccaga agctgaattg cttccctccg
    10321 ttgctcaagt tctggcggta agcaaccggc attcttcaac aagcgatacc ccgcacgtaa
    10381 ttccggtggc acgtgagaat catcatccag tatcaatggt tcgccgctac ctgtcaggtt
    10441 atcaaactca cctttcgctt gcgcttctgc tatatgacgc tctgcccact ggtcaagtaa
    10501 ccacataaat actccagggg atgaacaaaa agagtacagc tattgtagat aagtggggat
    10561 actacgggta taaaaaaacc cgccggggcg ggttttttac gttgcttcag attactctgc
    10621 agcagcttct gctttctctg aacgatcaac cagctcgatg taagccatcg gcgcgttgtc
    10681 gcctgcacgg aagccacact tcagaatacg agtgtaacca ccggcacggc tcgcgaaacg
    10741 cgggcccagt tcgttaaaca gttttgccac gatctcgtta tcacgagtac gggcgaatgc
    10801 cagacgacga ttagcaacgc tatcagtctt ggcaagagta atcagcggct caactacgcg
    10861 gcgcagctct ttcgctttag gcagagtcgt cttgatgatt tcatgacgaa ccagtgaacc
    10921 tgccatattg cggaacatag cctggcgatg gctgctgttg cggttcagtt gacgaccact
    10981 cttacgatgg cgcatgacct tatccttctc agtaaaacct taacctgtga tccggttact
    11041 cgtcagcgat gcttgccggt ggccagtttt ccaggcgcat gcccagagac agtccacggg
    11101 aagccagcac gtctttaatc tcagtaagag attttttacc aaggttaggc gttttaagga
    11161 gctcaacctc ggtacgctgt accagatcac cgatatagtg gatagcttct gctttaaggc
    11221 agttagcaga gcggacagtc aattccagat cgtcaacagg gcgcagcagg atcggatcga
    11281 actctggttt ctcttctttc acttcaggct gacgtacatc acgtaagtca acgaaagctt
    11341 ccagttgttc agccagaatg gttgccgcac gacgaatcgc ctcttcagga tcgattgtgc
    11401 cgttggtttc catttcgatg accagcttgt ccaggtcggt acgctgttct acacgcgctg
    11461 cttcaacatt gtaggcaata cgctccacag ggctgtagca tgcgtcgacc agcagacggc
    11521 cgattgggcg ctcatcttct tccgaatgaa ttcgggtaga agccggcaca taaccacgac
    11581 cgcgctgaac tttgatacgc atgctaatag acgcgttctc atcggtcagg tggcagatca
    11641 cgtgctgcgg cttgacgatt tcgacatcac cgtcgtgggt gatatcggct gcagtcacag
    11701 ggccaatgcc agatttattc aaggtaagaa taacttcatc tttgccctga actctcaccg
    11761 ccagcccttt caggttgagc aggatttcca ggatatcttc ctgaacgcct tctttggtgc
    11821 tgtactcatg tagtacacca tcaatctcaa cctcgatcac cgcgcaaccc ggcatcgatg
    11881 agagcagaat acggcgcagt gcgttaccca gagtatggcc aaagccacgc tctaaaggct
    11941 caagggtcac cttggcgtgc gtcgaactca cttgctcgat atcaaccagg cgcggtttta
    12001 gaaactctgt cacagaaccc tgcattgtgt cctctctttg gtactaagct ttacttggag
    12061 taaagctcga cgatcaggtg ttcgttaatg tccgcagaca gatcagaacg ctccggctta
    12121 cgcttaaacg taccttccat cttgccagca tcaacttcca gccaggttgg cttttcacgc
    12181 tgctcagcca gctccagagc ggctttcacg cgagactgct tcttcgcttt ctcacgaatg
    12241 cttacaacgt cattcggact aacctgataa gaagcgatgt taacaacacg accgtttacc
    12301 ataattgctt tatggctaac cagctgacgt gcttctgcac gagtggcacc gaagcccata
    12361 cggtatacaa cgttgtccag acgaccttcc agcagagcca acaggttttc accggtgttg
    12421 cctttcagac gtgctgcttc tttgtagtag ttacggaact gacgctccag cacaccatag
    12481 atacggcgaa ctttttgctt ttcacgcaac tgcacaccat agtcagacag acgcggttta
    12541 cgcgcaccgt gctggccagg agcttgttca attttacact tggtatcgat cgcgcgaacg
    12601 ccagacttaa ggaataagtc ggtgccctca cgacggctca gcttgagctt aggccccaaa
    12661 tatcttgcca ttttctttct ccaacaaacc tggaaaacga ggcgttatac gcgacgtttt
    12721 ttcggcggac gacaaccgtt atgagggatc ggagtcacat cagtaatgtt agtgatgcgg
    12781 aaacctgcgg cgttcagagc acgaatagta gattcgcggc ctggacccgg acctttaacc
    12841 ataacttcca gattcttgat gccgtattct ttcacggcgt cagcgcaacg ctctgctgca
    12901 acctgagctg caaacggagt ggatttgcga gaaccacgga aaccggaacc accggctgtt
    12961 gcccaaccca acgcgttacc ctgacgatca gtgatagtca cgatggtgtt gttgaaagaa
    13021 gcatggatat gagccacgcc gtcagagact tgttttctta cacgtttacg tgcacgaatt
    13081 ggtgcctttg ccattattca atcaccccga ttatttcttg atcggtttgc gcggaccctt
    13141 acgggtacgt gcgttggtct tggtacgctg accgcgaacc gggagaccac gacgatgacg
    13201 caaaccgcga tagcaaccaa gatccatcag gcgcttgatg ctcatgctga tttcacggcg
    13261 cagatcacct tcaacgacaa atttggcaac ttcgtcacgc agcgtgtcga tttgtccttc
    13321 agacagctca ctgatcttaa catcttcagc gatacccgct gcagccagga tggctttaga
    13381 acgggtcttg ccgacgccat aaatcgaagt taatgcgatt acggcatgct tatgatcagg
    13441 aatgttaatg cctgctatac gggccactat gcactcctac tatttaatat gtacgttcca
    13501 tgctgaaaag cccgttttca ggatactcaa atggaaacgc acagacatac aaaagattgg
    13561 ctggctaatc tagccagctc aacccaactt tgcaagaaaa atatgcgaaa aaatcagcct
    13621 tggcgctgtt tatgcttcgg ctcggcactg caaatcacac ggatgacacc atcacgctta
    13681 acgattttgc agttacggca taatttcttg acggaagcac gaactttcat ttttactctc
    13741 cgtaacttct cgggcgacca attatcggcc gtagcctttc aggttcgcct tcttcaatgc
    13801 agactcatac tgactggaca tcatcagagt ttgcacttga gccataaagt ccataatcac
    13861 gacaacaacg ataagcagtg aggtcccacc gaagtagaac ggtactttca ttgcatcacg
    13921 catgaactcc gggatcaggc agataaaggt aatatacagc gcaccaacca gggtcaggcg
    13981 ggtcattact ttatcgatat acttcgccgt ttgctctccc ggacgaattc ctggtacaaa
    14041 tgcaccggac ttcttcaggt tatctgctgt ttcacgcggg ttgaaaacca acgccgtgta
    14101 gaagaaacag aagaagatga ttgcagacgc atagagtaac acataaagcg gttgcccagg
    14161 ctgcaaatac agcgaaattg ttgtcagcca gttccaacca gtaccgcccc cgaaccatga
    14221 cgcgatggtc gccgggaaca gaataatact ggaagcgaag attgccggga ttacccccgc
    14281 catattcact ttcagcggta aatgtgtgct ctgtgcagca tagacacgac gaccttgctg
    14341 acgtttcgcg tagtttacca caatgcggcg ttgaccacgc tcaacaaata caacaaagaa
    14401 cgtcactgca aatactaata ctgcaaccaa cagcaacacg aggaagtgca ggtcgccttg
    14461 acgcgcttgc tcgatagtat gggcaatggc tggcgggagt cccgcgacaa taccggcgaa
    14521 gataatgatt gaaataccgt tgccgatacc tcgttcagtg atctgttcgc ccaaccacat
    14581 caggaacatc gttcctgtga ccagacttac aacagcggtg aagtagaatg caaagcccgg
    14641 gttaatcacc aggccttgca taccaggcat attcggcaga ccggtagcaa taccgatcga
    14701 ctggaatatt gccagcacca gagtaccgta acgggtgtac tggctgatct tacgacgacc
    14761 agactcccct tctttcttaa tttctgccaa cgttgggtga accaccgtca gcagttggat
    14821 aatgatcgac gccgaaatat acggcatgat ccccagagca aagatagaag cacggctgag
    14881 agcaccacca gagaacatgt taaacatctc aatgatggtg cctcgctgtt gctcaagcag
    14941 tttggcaagt acagcggcat caataccagg gatcggaata aaagagccaa tacgaaacac
    15001 aatcagcgca ccgataacaa acagcagtct gcgtttcagc tcgcctaagc cacctttggc
    15061 actttgaaaa tctaatcccg gttgtttagc catctgctac ttattcctcg attttaccgc
    15121 cagcagcttc gatagcagca cgagcgcctt tagtaacacg caggccacga acagttaccg
    15181 gagtcgttac ttcgccagcc aggatcactt tcgcaaactc gatctggata ccgataatgt
    15241 tagccgcttt gagcgtgttc aggtctacaa caccgccttc tactttagcc aggtcagaca
    15301 gacgaacttc ggctgtaatc gctgctttac gagaagtgaa gccgaatttc ggcagacgac
    15361 ggtacagagg catctgacca ccctcgaaac cgcgacgtac gccaccgcca gaacgagact
    15421 tctgaccttt gtgaccacga ccaccggttt taccgaggcc agaaccgata ccacgaccca
    15481 ggcgtttacc cgcctttttg gagccttcgg ccggagacag agtatttaaa cgcatctctt
    15541 actcctcaac tttaaccatg aaggaaaccg cgttgatcat accgcgaata gcaggagtat
    15601 cctcgcgctc tacggtgtga ccaatacgac gcagacccag gccaagcagc gttgccttgt
    15661 gtttcggcag acgaccgatt gcactgcggg tttgagtaat tttaatagtc tttgccatgg
    15721 tttatttccc cagaatttct tcaacggatt taccacgctt ggcagcgacc atttctggag
    15781 aattcatatt ttccaggcca tcaatagttg cacgaaccac gttgatcggg ttggtggaac
    15841 catatgcttt agccagaacg ttatgaaccc cagcgacttc cagaacggcg cgcattgcac
    15901 caccggcgat gataccggta ccttcggaag ccggctgcat gaatacgcga gaacccgtgt
    15961 gaacaccttt aacagggtgt tgcagagtgc cgttattcag cgcgacgtta atcatattgc
    16021 gacgggcttt ttccatcgct ttctggatcg ctgctggaac ttcacgcgct ttaccgtaac
    16081 caaaaccaac gcgaccgtta ccatcgccaa ctacagtcag agctgtgaag gagaaaatac
    16141 gaccaccttt aacggtttta gatacgcggt ttaccgcgat cagcttttcc tgcagttcgc
    16201 cagcttgttt ttcgatgtga gccatcttac acctctacct tagaactgaa ggccagcttc
    16261 acgggcagca tctgccagtg cctggacacg accatgatat tggaacccgg aacggtcaaa
    16321 ggatacatct ttgatgcctt tttccagagc gcgttcagcg acagctttac ccacagctgc
    16381 agccgcgtct ttgttaccgg tgtacttcag ttgttcagcg atagcttttt ctacagtaga
    16441 agcagctacc agaacttcag aaccgttcgg tgcaattacc tgtgcgtaaa tgtgacgcgg
    16501 ggtacgatgt accaccaggc gagttgcgcc cagctcctgg agcttgcggc gtgcgcgggt
    16561 cgcacgacgg atacgagcag atttcttatc catagtgtta ccttacttct tcttagcctc
    16621 tttggtacgc acgacttcgt cggcgtaacg aacacccttg cctttataag gctcaggacg
    16681 acggtaggcg cgcagatccg ctgcaacctg gccgatcacc tgcttatcag cgcctttcag
    16741 cacgatttca gtctgagtcg gacattcagc agtgatagcc gcaggcagct gatggtcaac
    16801 aggatgagag aaacccagag acaggttaat cacattgcct ttaaccgctg cacggtaacc
    16861 tacaccaacc agctgcagct tcttagtgaa gccttcggta acaccgataa ccattgagtt
    16921 cagcagggca cgcgcggtac cagcctgcgc ccaaccgtct gcgtaaccat cacgcggacc
    16981 gaaggtcagg gtattatctg catgtttaac ttcaacagca tcgttgagag tacgagtcag
    17041 ctcgccgttt ttacctttga tcgtaataac ctgaccgttg atttttacgt caacgccggc
    17101 aggaacaacg accggtgctt tagcaacacg agacattttt tcctccgatt aggctacgta
    17161 gcagataatt tcgccaccaa gaccagcctg gcgcgctgca cgatcagtca taacaccttt
    17221 agaggtagaa acaactgcga tacccagacc cgccataact ttcggcagct catctttacg
    17281 tttatagatg cgcagacctg ggcggctgac acgctgaatg ctttctacaa cagctttgcc
    17341 ctggaaatac ttcagagtaa gttccagttc aggcttggtg tcgccttcaa ctttaaaatc
    17401 ttcaataaaa ccttcttcct tcagcacgtt ggcgattgcc actttcagct tggaggaagg
    17461 catggtgacc gcagctttgt tcgcggcctg accgttacgg atacgggtca gcatatccgc
    17521 gatcggatct tgcatgctca tctgtcttta ctcccgtgat tcaattggtg acaattacca
    17581 gctagccttt ttcagacccg ggatttcacc gcgcatagcg gcttcacgga ccttaatacg
    17641 gctcaacccg aacttccgca ggaaaccatg cggacgacct gtttgacggc agcggttacg
    17701 ctgacgagac gggctggaat cacgcggcag agtctgcagc ttgagaacag cgttccaacg
    17761 atcttcgtcg gaagcgttca catcagagat gatcgctttc agttcagcgc gtttcgcgaa
    17821 gtatttatca gctaaagcta cgcgttttac ttcgcgtgct ttcattgatt gcttagccat
    17881 ttagtaaccc taccttactt gcggaacggg aagtcaaagg cagccagcag agcgcggcct
    17941 tcttcgtcag atttcgcagt agtggtaatg gtaatatcca aaccacgaac gcggtcgact
    18001 ttatcgtagt cgatttctgg gaagatgatc tgctcacgga cacccatgct gtagttacca
    18061 cgaccgtcga aagacttagc ggacaggcca cggaagtcac ggatacgagg tacagcaata
    18121 gtgatcaggc gctcaaagaa ctcccacatg cgttcgccac gcagagttac tttacagccg
    18181 atcggatagc cctgacggat tttgaagcct gcaacagatt tgcgtgcttt ggtgatcagc
    18241 ggtttttgac cggagattgc tgccaggtct gctgctgcgt tatccagcag ttttttgtca
    18301 gcgatcgctt caccaacccc catgttcagg gtgatcttct cgacccgagg gacttgcatg
    18361 acagaattgt agttaaactc agtcatgagt tttttaacta cttcgtcttt gtagtaatca
    18421 tgcagtttcg ccatcgtact actccaaatt acttgatagt ttcgctgtta gacttgaaga
    18481 aacggacttt tttgccgtct tcgaatctaa agcctacacg gtcagccttg ccgattgccg
    18541 cattgaagat tgctacgttg gaaacctgaa tagcggcttc tttttcaacg atgccacccg
    18601 gttggttcag ggccggaacc ggcttctgat gtttcttaac caggttgata ccttcaacaa
    18661 tgaccttgcc ggaagacagg acattcttaa ctttaccgcg tttaccttta tctttaccgg
    18721 ttaacacgat aacttcgtca tcacgacgga ttttcgctgc catgattcgc tccttagagt
    18781 acttctggtg ccagagagat aattttcatg aacttctcac tacgaagctc acgagttacc
    18841 ggcccaaaaa tacgcgtacc gataggctgc tcgctgttgt tgttcagaag aacacaagca
    18901 ttaccatcga agcgaatgac agaaccgtcc gggcgacgaa cacccttctt ggtgcgcacc
    18961 actaccgcct tcagcacatc accttttttg accttaccac gcggaattgc ttctttgatg
    19021 gtgatcttga tgatgtcgcc tacgcctgcg tagcgacggt gcgagccacc cagaaccttg
    19081 atacacatta cgcgacgtgc accggagttg tcggcgacgt tcagcatagt ctgttcttgg
    19141 atcattttag tgctccgcta atgtcaacta ctactgagac ccgaaaatca ggtcgttaaa
    19201 aatccccata tcgagggcgc ggcattataa caccgcttca aggatatggg tagaaaaaat
    19261 aaacggctca tttctgagta atgccga
//
LOCUS       DAJVTL010000084        19264 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.085, whole genome shotgun sequence.
ACCESSION   DAJVTL010000084 DAJVTL010000000
VERSION     DAJVTL010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19264
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.085"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(662..1039)
                     /gene="rnpB"
                     /locus_tag="OQQ26_002818"
     ncRNA           complement(662..1039)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="OQQ26_002818"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1072..2217)
                     /gene="garK"
                     /locus_tag="OQQ26_002819"
     CDS             complement(1072..2217)
                     /gene="garK"
                     /locus_tag="OQQ26_002819"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HCS1858216.1"
                     /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADG
                     GEGTVEAMIAATQGAERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE
                     KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE
                     IGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAM
                     IVELDNNLSHYADVIKKALHVNVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTAL
                     NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH
                     QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG"
     gene            complement(2314..3204)
                     /gene="garR"
                     /locus_tag="OQQ26_002820"
     CDS             complement(2314..3204)
                     /gene="garR"
                     /locus_tag="OQQ26_002820"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HCS1858217.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAA
                     GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISEALKEKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGAIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGT
                     ADHSALVCYYEKLAKVEVTR"
     gene            complement(3234..4004)
                     /gene="garL"
                     /locus_tag="OQQ26_002821"
     CDS             complement(3234..4004)
                     /gene="garL"
                     /locus_tag="OQQ26_002821"
                     /EC_number="4.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
                     /protein_id="HCS1858218.1"
                     /translation="MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWL
                     VLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVET
                     KEEAEQAVASTRNPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILAQIESQQGVDN
                     VDVIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSDILAP
                     VEADARRYLEWGATFVAVGSDLGVFRSATHKLADTFKK"
     gene            complement(4020..5354)
                     /gene="garP"
                     /locus_tag="OQQ26_002822"
     CDS             complement(4020..5354)
                     /gene="garP"
                     /locus_tag="OQQ26_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate/glucarate/glycerate transporter
                     GarP"
                     /protein_id="HCS1858219.1"
                     /translation="MILDTVDEKKKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEV
                     AKELQLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGF
                     VDMFPLAWAGISMFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFS
                     LALFSPLLGWLTFAWGWEHVFTVMGVIGFVLTALWIKLIHNPTDHPRMSAEELKFISE
                     NGAVVDMDHKKPGSAAASGPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIY
                     LVQEKGMSILKVGLVASIPALCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLL
                     ASTIILCNYTNNTTLVVMLMALAFFGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGN
                     VASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCYLFVVGDIKRMELQK"
     gene            5729..7300
                     /gene="garD"
                     /locus_tag="OQQ26_002823"
     CDS             5729..7300
                     /gene="garD"
                     /locus_tag="OQQ26_002823"
                     /EC_number="4.2.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactarate dehydratase"
                     /protein_id="HCS1858220.1"
                     /translation="MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLE
                     LIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMAVLPEAPPLHTL
                     PLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDL
                     LPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKL
                     QPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRET
                     CPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTP
                     RAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGK
                     SAIVEVLSPGQRPTQRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVP
                     VIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQW
                     GLHNQLAVFNPAPVT"
     gene            7449..7784
                     /gene="prlF"
                     /locus_tag="OQQ26_002824"
     CDS             7449..7784
                     /gene="prlF"
                     /locus_tag="OQQ26_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin PrlF"
                     /protein_id="HCS1858221.1"
                     /translation="MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHY
                     EILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVN
                     IDDEIGDDE"
     gene            7784..8248
                     /gene="yhaV"
                     /locus_tag="OQQ26_002825"
     CDS             7784..8248
                     /gene="yhaV"
                     /locus_tag="OQQ26_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ribonuclease
                     toxin YhaV"
                     /protein_id="HCS1858222.1"
                     /translation="MDFPQRVNGWALYAHPCFQETYDALVAEVEALKGKDPENYQRKA
                     ATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEK
                     EKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH"
     gene            complement(8303..9112)
                     /gene="agaR"
                     /locus_tag="OQQ26_002826"
     CDS             complement(8303..9112)
                     /gene="agaR"
                     /locus_tag="OQQ26_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aga operon transcriptional regulator AgaR"
                     /protein_id="HCS1858223.1"
                     /translation="MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVS
                     TVTIRNDLAFLEKQGIAVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVE
                     LIQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLR
                     RQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERII
                     VVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIPADSLEGLRKAGVEVILVGE"
     gene            9361..10641
                     /gene="kbaZ"
                     /locus_tag="OQQ26_002827"
     CDS             9361..10641
                     /gene="kbaZ"
                     /locus_tag="OQQ26_002827"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit KbaZ"
                     /protein_id="HCS1858224.1"
                     /translation="MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPL
                     LIEATSNQVDQFGGYTGMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPA
                     AQAMANADDLIKSYVAAGFKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCR
                     EHFGEADLEYVIGTEVPVPGGAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWP
                     RIIALVVQPGVEFDHTNVIDYQPAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLM
                     IDHFAILKVGPALTFALREALFSLAAIEEELVPAKACSGLRQVLEDVMLDRPEYWQSH
                     YHGDGNARRLARGYSYSDRVRYYWPDSQIDDAFAHLVRNLADSPIPLPLISQYLPLQY
                     VKVRSGELQPTPRELIINHIQDILAQYHTACEGQ"
     gene            10664..11137
                     /gene="agaV"
                     /locus_tag="OQQ26_002828"
     CDS             10664..11137
                     /gene="agaV"
                     /locus_tag="OQQ26_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312038.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IIB"
                     /protein_id="HCS1858225.1"
                     /translation="MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQ
                     QNLMEMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRI
                     NVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL"
     gene            11148..11969
                     /locus_tag="OQQ26_002829"
     CDS             11148..11969
                     /locus_tag="OQQ26_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS
                     mannose/fructose/sorbose/N-acetylgalactosamine transporter
                     subunit IIC"
                     /protein_id="HCS1858226.1"
                     /translation="MEISLLQAFTLGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLG
                     DLHTGILTGGTLELVWMGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPF
                     AVAVQMGITFLFSVMSGVMSRCDRMAENADTRGIERVNYLALLALGTRHSALGTRHSA
                     LGTFYFLCAFLPIYFGAEHAKTIIDVLPQRLIDGLGVAGGIMPAIGFAVLLKIMMKNV
                     YIPYFILGFVAAAWLKLPVLAIAAAALAMALIDLLRKSPEPTQPAAQKEEFEDGI"
     gene            11959..12837
                     /locus_tag="OQQ26_002830"
     CDS             11959..12837
                     /locus_tag="OQQ26_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019079236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter family
                     subunit IID"
                     /protein_id="HCS1858227.1"
                     /translation="MASNQTTLPNVSENEETLLTGVNENVYEDQSIGAELTKKDINRV
                     AWRSMLLQASFNYERMQASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVT
                     FVIGIILAMERSKQDVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGS
                     ILGAVVFIVLFNVVHLGLRFGLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGA
                     LVATYVRLSTTLEITAGDAVVKLQADVIDKLMPAFLPLVYTLTMFWLVRRGWSPLRLI
                     AVTVVLGIVGKFCHFL"
     gene            12855..13289
                     /locus_tag="OQQ26_002831"
     CDS             12855..13289
                     /locus_tag="OQQ26_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCS1858228.1"
                     /translation="MLSIILTGHGGFASGMEKAMKQILGDQSQFIAIDFPETSSTALL
                     TSQLEEAIAQLDCEDGIVFLTDLLGGTPFRVASTLAMQKPGCEVITGTNLQLLLEMVL
                     EREGLSGEEFRVQALECGHRGLTSLVDELGRCHEECPVEEGI"
     gene            13286..14419
                     /gene="nagA"
                     /locus_tag="OQQ26_002832"
                     /pseudo
     CDS             13286..14419
                     /gene="nagA"
                     /locus_tag="OQQ26_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312042.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
     gene            14770..15924
                     /locus_tag="OQQ26_002833"
     CDS             14770..15924
                     /locus_tag="OQQ26_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AgaS family sugar isomerase"
                     /protein_id="HCS1858229.1"
                     /translation="MPENYTPAAAASGTWTEEEIRHQPRAWIRSLTNIDALRSALNNF
                     LEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPA
                     HPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALL
                     MPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGV
                     FGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNET
                     LVVVFVSSHPYTRQYDLDLLAELLRDNQAMRVIAIAAESTDIVAAGPHIILPPSRHFI
                     DVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA"
     gene            15937..16806
                     /gene="kbaY"
                     /locus_tag="OQQ26_002834"
     CDS             15937..16806
                     /gene="kbaY"
                     /locus_tag="OQQ26_002834"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit KbaY"
                     /protein_id="HCS1858230.1"
                     /translation="MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAIQAILEVCSEM
                     RSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVR
                     SAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDP
                     QEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPD
                     EFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRN
                     KINVCGSANRISA"
     gene            16972..17448
                     /gene="agaB"
                     /locus_tag="OQQ26_002835"
     CDS             16972..17448
                     /gene="agaB"
                     /locus_tag="OQQ26_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IIB"
                     /protein_id="HCS1858231.1"
                     /translation="MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDD
                     IQQKLMGITAETYDFGIRFFTIEKTINVMGKAAPHQKIFLICRTPQTVRKLVEGGIDL
                     KDVNVGNMHFSEGKKQISSKVYVDDQDLADLRFIKQRGVNVFIQDVPGDQKEQIPD"
     gene            17487..18290
                     /gene="agaC"
                     /locus_tag="OQQ26_002836"
     CDS             17487..18290
                     /gene="agaC"
                     /locus_tag="OQQ26_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IIC"
                     /protein_id="HCS1858232.1"
                     /translation="MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAIL
                     GDIQTGLITGGLTELAFAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLP
                     FSLLMQYVILFFYSAFSLFMTKADKCAKEADTAAFSRLNWTTMLIVALAYAVIAFLCT
                     YLAQGAMQTLVKAMPAWLTHGFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVC
                     YIQVSNLLPVAVLGAGFAVYEFFNAKSRQQAQPQPVASKNEEEDYSNGI"
     gene            18280..19071
                     /gene="agaD"
                     /locus_tag="OQQ26_002837"
     CDS             18280..19071
                     /gene="agaD"
                     /locus_tag="OQQ26_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708938.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylgalactosamine transporter subunit
                     IID"
                     /protein_id="HCS1858233.1"
                     /translation="MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKK
                     IYKDDKPGLSAAMKDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPI
                     AGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGV
                     KAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFDK
                     VFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL"
     gene            19072..>19264
                     /locus_tag="OQQ26_002838"
     CDS             19072..>19264
                     /locus_tag="OQQ26_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactosamine-6-phosphate isomerase"
                     /protein_id="HCS1858234.1"
                     /translation="MERGTASGGASLLKEFHPVQTLQQVENYTALIERASEYLLAVIR
                     SKPDAVICLATGATPLLTYH"
BASE COUNT         4692 a         5022 c         4864 g         4686 t
ORIGIN      
        1 aggaattcct ttttgataat agcctcgaga aagacgaaaa ttcttcggac aattgctttg
       61 aggtcgaaaa atataacgca tatgaagcat ataactcaga gaatctatat tttaccagag
      121 aggaatatac gtatgattac gaccttttaa atgcaatata gacataataa cttcttacaa
      181 aatctataat taataccgta gatattcatt catcttaccc tgtgcaccaa aagcaaaaac
      241 tcactgacgc gggtttgaaa ctgatggcaa ccgcaaaaat gcctgatgcg ctacgcttat
      301 caggcctacg ccatctctgc aatatattga atttgcgtgc ttttgtaggc aggataaggc
      361 gttcacgcag catccggcat gaataaagcg cactcaacaa tctgaaaccc gccgaagcgg
      421 ttttttacgt aaatcaggtg aaactgaccg ataagccgct ttcttttggg tatagcgtcg
      481 tggacagtca ttcatctttc tgcccctcca aaagcaaaaa cccgccgaag cggtttttta
      541 cgtaaaccag gtgaaactga ccgataagcc gctttctttt gggtatagcg tcgtggacag
      601 tcattcatct ttccgctcct ccaaaagcaa aaacccgccg aagcgggttt ttacgtaaat
      661 caggtgaaac tgaccgataa gccgggttct gtcgtggaca gtcattcatc taggccagca
      721 atcgctcact ggctcaagca gcctacccgg gttcagtacg ggccgtacct tatgaacccc
      781 tatttggcct tgctccgggt ggagtttacc gtgccacgga ctgttaccag ccgcgcggtg
      841 cgcccttacc gcaccctttc acccttacct gatcccgctt gcgcgggcca tcggcggttt
      901 gctctctgtt gcactggtcg taggtttccc cccccaggcg ttacctggca ccctgcccta
      961 tggagcccgg actttcctcc cctccgcccg tctcccccga agaggacgac gacgaagcgg
     1021 cgactgtctg gtcagcttcg gcacgcagta tagagggttt gcgcgccctt gtcaccccgc
     1081 gttgcgcatt ccaatcgcca gtgtcgcggc gatattacgt gaagcacggc agatattgtc
     1141 ataagccccg cggaatgctt cgtccaacgt acctatgctg gtcaatacgc tgaagaccgc
     1201 atcgatgcca tgctgatgta caacgccaac atcatcggtc aggctacccg caatgccaat
     1261 caccggttta tggtacttct tcgccacgtt tgcaacgcca atcggtacct tgccgtgaat
     1321 actctggctg tcaatacgcc cttcaccggt gatcaccagc gtacaatcgt gaatatgttc
     1381 ttccagattc agcgccgtag tgacgatttc aataccactt ttcagttccg caccaagaaa
     1441 cgccatcagc gccgcgccca taccgcccgc agctcctgcg ccggggacat ctttcacatt
     1501 aacatgcagc gcttttttaa tgacatcggc atagtgagag aggttattgt ccagctcaac
     1561 aatcatcgct tcactggctc ccttttgtgg gccaaagatg cgcgatgcgc cgttatcgcc
     1621 caccagcgga ttggtgacat cacaagcgac gcgaatgacg caatctttta agcgcggatc
     1681 gaggccggaa atatcaatat cattcagagt attaagacta ccgccgccaa aaccaatttc
     1741 attgccgttg gcgtcgcata atttcgcccc cagcgcctgt accatgcctg cgccgccatc
     1801 atttgtagcg ctgccgccaa tgccgataat aatgtttgtc gcaccgctct ccagcgcctg
     1861 caggattaac tcgcctgtgc cgcgtgaagt ggtcacgagt ggatcgcgtt tttccgcagg
     1921 taccagctcc agcccactgg ccgccgccat ttcaataaac gcggttttgc catcgccgga
     1981 gatcccccaa ctggcattca ctttctcgcc cagtggccct gtaacccagg cgtgacgttc
     2041 agccccctgg gtggctgcaa tcatcgcttc caccgttcct tcgccaccgt cggcaacagg
     2101 aacagaaacg tactgtgcat caggaaaaat ttcccgaaat cctttttcta tcgcctgcgc
     2161 aacctcgctg gcagataaac tttctttata agagtctggg gcgattacga ttttcatacc
     2221 tatgcctgtt accacatgac gccggagggc gtttctctta ttcggcctgg attccaggcc
     2281 cggattgcaa tacgccatcc gggcactacg tcattaacga gtaacttcga ctttcgccag
     2341 tttttcgtag tagcacacca gggcgctatg atccgccgtt cctaaaccat ctgcacgcag
     2401 tgcctgcatc atctccataa ccgcagctgt gagcggcagt tgtgcgccga cgccgtgaga
     2461 agtatccagc gcattcgcca gatccttaat atgcagatca atacggaagc ccggcttgaa
     2521 gttgcggtcc atcaccatcg gcgctttagc atccagcacg gtactgcccg ccagtccacc
     2581 gcgaattgcc tgataaacca ggtccgggtt aacgcccgct ttagttgcca gcgttaacgc
     2641 ttctgacatc gcggcaatat tcagcgccac aatgacctga ttcgccagtt tggtgacgtt
     2701 acctgcacca attgccccgg tatgcaccac ggaacccgcc attgctttca tcaaatcata
     2761 gtatttgtcg aaaatagcct tgtcgccgcc caccatcact gacagcgtac cgtcgatggc
     2821 tttcggttca ccgccgctca ccggagcatc cagcatatca atgcctttct ctttcagagc
     2881 ttcgctgatt tcacggcttg ccagcggtgc gatagaactc atatcgatca ataccgtacc
     2941 tggcttcgcg ccttcaataa tgccattctc acccagcgcc acctctttca catgagggga
     3001 gtttggcagc atggttatga tgacgtcgca ctgttcagcg atcgctttag ccgtagaggc
     3061 tgtttctgca cctgcagcaa tcacgtcagc aatagcttct gggttacggt cagcaaccac
     3121 cagcgagtaa cctgctttca gaaggttttt actcattggt ttacccataa tccccaggcc
     3181 aataaaacca actttcatag tcatatcaat catctctctt gttgcggtgg tgattatttt
     3241 ttaaaggtat cagccagttt atgagtggca gagcggaaga cgccgagatc gctgccgaca
     3301 gccacaaacg tcgcgcccca ttccagataa cgacgcgcat cggcttcgac cggcgcgagg
     3361 atatcgctgg gtttgccgtg cgcgctggca cggttaaaaa tgtgctgaat tgctttttgt
     3421 acatccgggt gtgatgcatt gccgagatgg cctaatgccg cggccagatc gctggggccg
     3481 acgaagatgc cgtctacgcc ttcggtagcg gcaatgacat cgacgttatc tacgccctgc
     3541 tgactttcta tctgggccag aatagtgatg ttcttgttcg actgagcgaa ataatccgcc
     3601 acggtgccaa acatattggc gcggtgagaa acggagactc cgcgaatgcc ttccggtggg
     3661 ttacgggttg atgccaccgc ctgctctgct tcctcttttg tttctacaaa aggaatcagg
     3721 aagttataga aaccgatatc cagaagacgc ttaataatta ccggctcgtt ggtcggcact
     3781 cgcactactg gcgcgctggc gctgcctttc aaggccatta actgcggaat aaacgtggag
     3841 atatcgtttg gcgcatgttc gccatccagc accagccagt caaacccagc caaaccaaga
     3901 acttcagtgc taatcgggtt agagagtgct gaccagcaac caatttgtac ctgtttcgca
     3961 gccagtgcgg ctttgaattt attcgggaaa acatcgttat tcatcgctta tacctttgct
     4021 tatttctgca attccatacg tttaatgtcg ccaactacga agaggtagca gaccatcgcc
     4081 atcagcgctg aacatcccac gaaaaccagt gctgcattga aggagtgcag ttcacttacc
     4141 aggtagccaa tcaccagtgg agtgacaatg gaggcaacat tgccaaagac gttaaagacg
     4201 ccgccacaga ggccaacaat ctctttcggc gcggtgtcag aaatcaccgg ccagcccaga
     4261 gcaccaaatc ctttgccaaa aaaagccagc gccatcagca tgaccaccag cgtggtgttg
     4321 ttggtgtagt tacataagat gatggtggaa gccagcaaca ttcccagcac aatcggtagc
     4381 ttacgtgcca gggtcaggga taaaccgcgt ttgatcagat aatccgagaa gacacctccc
     4441 agcacgccgc ccgcaaaacc acacagtgcc ggaatcgagg cgaccagacc cactttcaga
     4501 atcgacatgc ctttttcctg caccagataa atcgggaacc aggtgaggaa gaaccaggtg
     4561 atggtgttga taaaatattg tccgaaaaat acgcccaaca tcatgcggtt agagagcaat
     4621 tgcttgatgt aatgcagttt gggaccgctt gctgccgcgc tgcccggctt tttgtggtcc
     4681 atatcgacca ccgcgccatt ttcagagata aacttcagct cttccgcaga catacgtggg
     4741 tgatctgtcg ggttatgaat caacttgatc cacagcgccg tcagcacaaa accaatcacc
     4801 cccataacgg taaagacgtg ctcccatccc caggcgaaag tcagccagcc aagcagaggc
     4861 gaaaagagcg ccagcgagaa atattgtgcc gagttaaaga tggcggaagc agtaccacgt
     4921 tctttcgtcg ggaaccaggc ggcgacaata cgggcgttcg ccgggaatga tggcgcttcc
     4981 gagaagccga gcataaagcg cataaagaac atggagatcc ctgcccaggc cagcgggaac
     5041 atatcaacaa agccttgcag gaaggtgaat agcgaccaga aaaagaggct gtaggtataa
     5101 acttttttcg agccaaactt atcaagcagc cagccgccgg ggatttgcat cagcaagtag
     5161 gcccagccaa aagcagaaaa gatgtaaccc atcgaaaccg cacttaactg caactctttt
     5221 gctacttcgg taccagcaat agacagcgtt gcacgatcgg cgtagttaac ggcggtaaca
     5281 ataaaaataa tcagtaatat taaatagcgg gtatgcacgc ctttcttttt ttcgtcaacg
     5341 gtgtccagaa tcattttatt tacctcgggt acttatgctg atttttatta ttatggggaa
     5401 agtgttattt atgagtttca tttatgccgt aacgacaatg aactcgggaa ttagtataag
     5461 cagcgcgaga ataataatca ttgtgcaaat gctaatttaa ttaataccat ttaaatatta
     5521 ttttgagcat atgcacataa ggttgcgcgc taaagcacag atttgcgctt taccttgccg
     5581 ggcggcactg caatccctga aatgattgac attgttcaca tttctgcgtt taaactcctg
     5641 acattcttat ttcacccaat gaagtcattt atttttaaat gagaccaggt cctcatttta
     5701 ataacccctg gctggagaat attgcacaat ggccaacatc gaaatcagac aagaaacgcc
     5761 aactgcgttt tatataaaag ttcacgacac agataatgtg gcaattattg ttaatgataa
     5821 tggcctgaaa gcaggaacgc gttttccgga tgggctggaa ttaattgaac atattcccca
     5881 ggggcataaa gtcgcattgc tggacattcc ggctaatggt gaaattattc gttatggcga
     5941 agtgattggt tacgccgtgc gcgcaatccc acgcggaagc tggatcgacg aatcaatggc
     6001 tgtactaccg gaagcgccgc cgttacacac gctgccactg gcaaccaaag tcccggaacc
     6061 cttaccgccg ctggaaggat acacctttga gggatatcgc aatgccgatg gcagcgtggg
     6121 caccaaaaac ctgctcggca tcaccaccag cgtccactgt gtggcaggcg tggtggacta
     6181 cgtagtaaaa atcattgaac gcgatctgct accgaaatac ccgaacgtcg atggcgtggt
     6241 ggggctgaat catttgtacg gttgtggcgt ggcgattaac gcaccggcgg cagttgttcc
     6301 tattcgtacc attcacaata tttcgctgaa ccctaacttt ggcggcgaag taatggtgat
     6361 tggactgggt tgtgaaaagt tgcagcctga gcgcctgctg actggaacgg atgatgtgca
     6421 agctattcca gtagaaagcg ccagcattgt cagtttgcag gatgaaaagc atgtcggttt
     6481 tcagtccatg gtcgaggata ttttgcaggt cgccgaacgc catctacaaa aactgaatca
     6541 acgtcagcga gaaacctgtc cggcttcaga actggttgtc ggcatgcagt gcggtggcag
     6601 cgatgcgttt tctggcgtaa cggcaaaccc ggcggttggg tatgcgtctg atctactggt
     6661 gcgctgcggt gcaacggtga tgttctcaga agtaacggaa gtgcgtgacg cgatccatct
     6721 gctgacgccg cgcgccgtta acgaagaggt cggcaaacgg ctgctggaag agatggagtg
     6781 gtacgataac tatctcaata tgggaaaaac cgaccgcagc gccaaccctt cgccgggcaa
     6841 caagaaaggc ggtctggcaa acgtggtaga gaaggcactc ggctccattg ctaaatcggg
     6901 taaaagcgca attgttgaag tgctgtcgcc cggtcaacgc ccgactcaac gcggattaat
     6961 ttacgccgcg acgccagcca gcgattttgt ctgtggcacg caacaggtgg cttcgggtat
     7021 caccgtgcaa gtgtttacga ccggtcgtgg tacgccgtac ggcctgatgg cggtacccgt
     7081 cattaaaatg gcgacccgca ccgagctggc gaaccgctgg tttgatttaa tggatattaa
     7141 cgcgggcact atcgccaccg gcgaagaaac cattgaagag gtgggctgga agttgttcca
     7201 ctttattctc gacgtcgcca gcgggaagaa gaaaaccttc tcggatcaat ggggactgca
     7261 taaccagctg gcggtgttta acccggcacc ggtgacctga tttcttttgg aacgtccctc
     7321 gcaaaacatg gccttagtgc catgttttta ttgtttaaag cccccacgtc cattaataat
     7381 gcatttgcat taccttagtt caagcttata atttgagcag aaaacaggct gtaaaaggac
     7441 agtgaatcat gcccgctaat gctcgctctc acgctgtact gaccactgaa tcaaaggtca
     7501 cgatacgcgg acaaacaact atccccgcgc cagtgcgtga ggccttaaaa ctgaagccag
     7561 gccaggacag cattcattac gaaattctgc ctggtgggca agtatttatg tgccgactgg
     7621 gagatgaaca ggaggatcat actatgaatg catttttgcg ttttctggat gcagatatcc
     7681 agaacaaccc gcaaaaaact cgtccattca acattcaaca aggaaagaaa cttgtcgctg
     7741 gcatggacgt caacattgat gatgagattg gcgacgacga ataatggatt ttccacaaag
     7801 ggttaatggt tgggcgctat atgctcatcc ctgttttcag gaaacctacg atgctttagt
     7861 tgccgaagtc gaggcattaa agggaaaaga tcctgaaaat tatcagagaa aagctgccac
     7921 aaagttattg gcggtggtcc ataaagtgat tgaggagcat atcacggtca atccatcatc
     7981 accggcattc cgtcatggca agtcgttagg ctccgggaaa aataaagact ggtcacgggt
     8041 aaaatttggt gctggtcgct atcgtctctt ctttcgttac agtgaaaaag agaaagtcat
     8101 cattctggga tggatgaacg atgaaaacac tctgcgcacc tacggtaaaa aaacagatgc
     8161 ctataccgta ttcagcaaaa tgttaaaaag aggacatcct cctgccgact gggaaaccct
     8221 cacccgagag acagaagaaa cccattgatg gtgttcacaa tgcccgccga acgcattcgt
     8281 gttgaccagc gggcaccctt tctcactccc cgaccagaat cacttcaacc ccagcctttc
     8341 gcagtccttc cagactatcc gcaggaatgc cttcatcaac aatgatcatg tcgatacgtt
     8401 gagtatcaat gatcttatgt aaactggaac gattgaattt actggaatcg gtgaccacga
     8461 tgatccgttc cgcaacttcg cacatccgac ggtttaaacg ggcttcatct tcattatgtg
     8521 tgctgacgcc gcgctccaga tcgatcgcat ctacaccaag aaacagcata tcgaagtggt
     8581 aattttgcag cgattgctca gcctgatcgc cgtaaaaaga ttgcgactga cggcgcaaat
     8641 gcccgccggt catcagcagc tcaacgcctt ccgcttccag caacgcatta gccacgttca
     8701 taccgttggt catcgcaatt acgtcagtgt gcttgcgcat cagacgagca atctcaaaag
     8761 tggtggtccc ggaatcgagg atcacccgat gacctggctg aatcaactca acggcagctt
     8821 tcgcaacgct gcgtttcatc gcggtgttca gtgcgctttt atcttccact gatggctcga
     8881 ctgacggcgt cgtgctatcg cagatcaacg cgccaccata ggcacgcaca gcgatcccct
     8941 gcttttccag aaacgccaga tcattgcgga tcgtcacagt agatacgcca tacaatgccg
     9001 acagatcgtt aacctgcaca ctcccttgct gtcgcagacg ctgaatgatc tgttctcgtc
     9061 gctcgctggt gccagtcact cgcttctcac ctgaagcgtc ggtattactc atagtaagtc
     9121 ctttcgtaaa actttcgttt catttcgttt tgcctattaa cgcctttcta ttaagcaaat
     9181 gcaagcccac cttgcccatt gacgcaagct actctcgttt cagtaacttt cattatgttt
     9241 cttttgtgaa tcagatcaga aaactattat ctttcgtttt atttttatct caccatgacg
     9301 cagtatcaac tgaaacaaaa cgaaagattg atatcgcagt aatctgaact ggagaggaaa
     9361 gtgaaacatc tgacagaaat ggtgagacag cacaaagcgg gcaaaacaaa tggaatttat
     9421 gccgtttgtt ccgcacatcc gctggtgctg gaggctgcaa tccgctacgc cagtgcaaac
     9481 caaacgccgt tactgattga agcaacctcc aatcaggtag accagttcgg cggttatacc
     9541 ggaatgacgc ccgccgattt tcgcggcttt gtttgtcagc tcgccgactc gttgaatttc
     9601 ccgcaggatg cgttgattct ggggggtgac catctggggc caaaccgctg gcaaaacctg
     9661 ccagccgctc aggcaatggc caatgccgat gatttgatta aaagctacgt tgcggcagga
     9721 ttcaaaaaaa tccaccttga ttgcagcatg tcctgtcagg acgatccaat tcccttaact
     9781 gatgacatcg tggctgaacg cgccgcccgt ctggcgaaag tggcggaaga aacctgtcgc
     9841 gaacactttg gcgaagccga tctggagtat gtcattggta ccgaagtgcc ggtacctggc
     9901 ggcgcgcatg aaaccttaag cgagctggcg gtcaccacgc cggatgccgc ccgcgccacg
     9961 ctggaagccc atcgtcacgc ctttgaaaag caaggtctaa atgccatctg gccacgcatc
    10021 attgccctgg tggttcaacc cggcgtcgaa ttcgatcaca ccaacgttat tgattatcag
    10081 ccagccaaag cgagcgcctt aagccagatg gtcgaaaact acgaaacgct gattttcgaa
    10141 gcgcactcta ccgattatca aacgccgcaa tcgctgcgcc agctgatgat tgaccacttt
    10201 gccattctga aagttggccc ggcgctgacc ttcgccctgc gtgaagccct tttttctctg
    10261 gcggcgattg aagaagaact ggtaccagcg aaagcctgtt ccggtctgcg tcaggtgctg
    10321 gaagacgtga tgctcgaccg cccggaatac tggcaaagcc actaccacgg tgacggcaac
    10381 gcgcgtcgtc tggcgcgtgg ttacagctac tcggatcgcg tgcgctatta ctggccggac
    10441 agccagattg atgacgcttt cgcccatctg gttcgtaatc tggcggattc accgattccg
    10501 ctgccgctca tcagccagta tctgccgctg caatacgtga aagttcgctc cggcgagctg
    10561 cagccaacgc cacgggaact cattatcaac catattcagg acatcctggc gcagtaccac
    10621 acagcctgtg aaggccaata agcaaaacaa agaggaacac gctatgccaa atattgtttt
    10681 aagccggatt gatgaacgct tgattcacgg tcaggtcggc gttcaatggg tcggatttgc
    10741 gggggcaaat ctggtgctgg tagccaacga tgaagttgcc gaagatccgg tacaacaaaa
    10801 cctgatggaa atggtactgg cagaagggat cgccgtacgt ttctggacgc tgcaaaaagt
    10861 tatcgacaac attcatcgcg ccgccgatcg acagaaaatc ctgctggttt gtaaaacacc
    10921 cgccgatttc ctgacgctgg tgaaaggtgg cgttccggtg aatcgcatta acgttggcaa
    10981 tatgcactac gccaatggca agcaacaaat cgccaaaacg gtttctgtgg atgcgggcga
    11041 tatcgcagca tttaacgacc tgaaagccgc tggggtggaa tgcttcgttc agggcgtccc
    11101 gacagagcct gctgtagacc tctttaaatt actttgaggg attcatcatg gaaatcagtc
    11161 tgttgcaggc attcacgttg ggcattatcg cctttatcgc tggtctggat atgtttaacg
    11221 gcttaaccca tatgcaccgc ccggtggtcc tcggcccgtt agtcgggctg gtacttggcg
    11281 atctgcatac cggtatttta accggcggta cgctggaact ggtgtggatg gggctggccc
    11341 cgctggcggg cgcacagccg cctaacgtga ttatcggtac tatcgtcggc acggcgtttg
    11401 ccattactac tggcgtgaaa cccgatgtcg cggtcggtgt cgccgtacct ttcgctgtcg
    11461 cagtacagat ggggattacc ttcctgttct cggtgatgtc tggcgtgatg tctcgctgcg
    11521 accggatggc ggagaacgcc gatactcgcg gcattgaacg cgtaaactat ctggcactgc
    11581 tggcactcgg cactcggcac tcggcactcg gcactcggca ctcggcactc ggcactttct
    11641 attttctctg cgcgttcctg cctatctact tcggcgcgga acatgcaaaa accatcattg
    11701 atgtcctgcc gcaacgatta atcgacggcc tcggcgtcgc gggcggcatc atgccagcaa
    11761 tcggttttgc cgtgctgctg aaaatcatga tgaaaaacgt ctacatcccc tacttcatcc
    11821 tgggctttgt tgccgcagcc tggctcaagt taccggtgct ggctattgct gccgccgcgc
    11881 ttgcgatggc gctgatcgat ctgctgcgta aatctcctga accgactcaa cctgcggcac
    11941 agaaagagga atttgaagat ggcatctaat caaaccaccc taccgaacgt cagtgaaaac
    12001 gaagaaacat tgctgactgg cgtcaatgaa aacgtatatg aagatcagag cattggcgcg
    12061 gagctgacga aaaaagatat caaccgcgtc gcctggcgtt ccatgctgtt acaagcgtct
    12121 tttaactacg aacgtatgca ggcttctggc tggttgtacg gtctgctgcc tgctctgaaa
    12181 aagatccaca ctaataaacg cgacctggcg cgcgccatga aggggcatat gggtttcttc
    12241 aatacccatc cgtttctggt gacgtttgtt atcggcatta tcctcgcgat ggagcgttct
    12301 aagcaggacg ttaacagtat tcagagcacc aaaattgccg tcggtgcgcc gctcggcggg
    12361 attggtgatg cgatgttctg gctgacgcta ctgccgattt gtggcgggat aggcgcaagc
    12421 cttgcgctac aaggctctat tcttggcgca gtcgtattta ttgtgctgtt caacgtggta
    12481 cacctggggc tgcgttttgg tcttgcgcat tatgcttacc gcatgggcgt ggcggcgatt
    12541 ccactcatta aagcgaatac caaaaaagta ggtcatgcgg catctatcgt tgggatgacg
    12601 gtaatcggcg cgctggtggc aacctatgtt cgtttaagca ccacgctgga aatcacagcg
    12661 ggcgacgcag tggttaagtt acaggctgat gttatcgaca aactgatgcc tgccttctta
    12721 ccgctggtct acaccctgac catgttctgg ctggtacgcc gcggctggag tccgctgcgc
    12781 ctgattgcgg ttaccgtggt tctagggatc gtcggtaaat tctgccattt cctttaaata
    12841 caatgaggta ttagatgtta agtattattt tgacagggca tggcgggttt gccagtggca
    12901 tggaaaaagc aatgaagcaa atcctcggcg atcaatcgca gtttattgcc atcgattttc
    12961 ccgaaacctc aagcaccgcg ctgcttacat cgcagcttga agaggccatc gcccaactgg
    13021 attgtgaaga cggcattgtt tttctgacgg atttgctggg cggcacgccg tttcgcgtag
    13081 cttcaacgct ggcgatgcaa aaaccgggct gtgaagtgat caccggcacc aatttgcaac
    13141 tgctactgga gatggtgctg gagcgcgaag ggttaagcgg tgaagagttc cgtgtgcagg
    13201 cactggagtg tggacatcgt gggctgacca gtctggtgga cgagttaggc cgctgccatg
    13261 aggaatgtcc ggtcgaggaa ggaatatgac acaagttctg cgcgccagaa ggctgctgac
    13321 tgaagagggc tggcttgatg atcatcagct gcgcattact gacggtgtca tcgcagcaat
    13381 cgaaccgatt ccagtgggcg tgactgaacg cgatgcggaa ctgctctgcc ctgcttacat
    13441 cgacacccat gtacacggtg gtgcgggcgt tgatgtaatg gatgacgcgc cggatgtgtt
    13501 cgacaagctg gcaatgcaca aggcacgcga aggtgtcggc agttggttac cgaccaccgt
    13561 aaccgcgccg cttaatacca ttcatgcggc gctgaaacgt attgctcaac gttgccaacg
    13621 cggcggacct ggtgcgcaag tgctggggag ttatctcgaa ggaccgtact tcacgccgca
    13681 gaataaaggc gcgcatccgc cggagttgtt tcgcgagctt gaaattgccg agctggatca
    13741 gttgattgcc gtttctcagc acaccttacg tgtggtagcg ctggcaccgg aaaaagaagg
    13801 ggcattgcag gccatccgcc atcttaaaca gcaaaacgta aaggtgatgc tggggcatag
    13861 cgcggcgact tggcaacaaa cccgcgccgc atttgatgct ggtgccgacg gcctggtgca
    13921 ttgctataac gggatgacag gtttacatca ccgcgaaccg ggaatggttg gcgcgggatt
    13981 aacggacaag cgcgcctagc tggaactgat agccgatggt catcatgtgc atccggcggc
    14041 aatgtcgctg tgttgttgct gtgcgaaaga gagaatcgta ctgatcaccg acgcgatgca
    14101 ggcagctggg atgccggatg gtcgctatac gttatgtggt gaagaagtgc agatgcacgg
    14161 tggcgttgtc cgtaccgcgt ctggtgggct ggcgggcagt acactgtctg ttgatgcggc
    14221 agtgcgcaat atggtcgagt tgacgggcgt aacgcctgcg gaagccattc atatggcatc
    14281 gctgcatccg gcgcgaatgc tgggtgttga tggtgttctg ggatcgctta aaccgggcaa
    14341 acgcgccagc gtcgttgcgc tggatagcgg gctgcatgtg caacaaatct ggattcaggg
    14401 tcaattagct tcgttttgat ggtttgctcc attattgggc cttcacttcc cccgtaaggc
    14461 ctttcttttt ctttcgtttt gatctgagca gccttgtcgg atgcgacgct aacgcgtctt
    14521 atccgaccta cagtacgccg catccggcaa tcggtgcaca tagcaacgtc atcatgcaat
    14581 tctttaatct tcccttatct tttctttcaa cgatcacaaa tttcgtttta tttctttttt
    14641 ctccattgaa gtttcagttt cttttctata gattttaatc aacgaaagac atcaccaagt
    14701 gaaatgaaac gaaaggcaag tgaaagcaac aacgcccgac gtcaagttca tcagactaag
    14761 gattgagtta tgccagaaaa ttacacccct gctgccgccg catccggtac atggactgaa
    14821 gaagagatcc gccatcagcc tcgcgcatgg atccgttcac tcaccaacat cgacgcgcta
    14881 cgttccgcgc tcaataactt ccttgaaccg ttactgcgca aagagaatct gcggatcatc
    14941 ctgaccggag ccggaacctc ggcatttatc ggtgacatca tcgcgccgtg gctcgccagc
    15001 cataccggta aaaacttcag cgccgtacca accaccgatc tggtcactaa tccgatggac
    15061 tacctgaacc cagctcatcc gctgctgttg atctccttcg gtcgatccgg caacagcccg
    15121 gaaagcgtcg ctgccgtgga actggcaaat caatttgtac cagaatgcta tcacctgccg
    15181 atcacctgca acgaagcggg cgctctttac caaaacgcga tcaacagcga caacgcgttt
    15241 gccctgctga tgcccgcaga aacgcacgat cgcggctttg cgatgaccag cagcattacc
    15301 accatgatgg ccagctgcct cgcggttttc gcacctgaga cgatcaacag ccaaaccttc
    15361 cgcgacgtgg cggatcgttg ccaggcgatc ctgacctcat tgggcgattt cagcgaaggt
    15421 gtgtttggtt acgcaccgtg gaaacggatc gtttatctcg gcagcggtgg cttacagggc
    15481 gcagcacgcg agtcggcgct gaaagtgctg gaactgactg cgggtaaact ggcggccttt
    15541 tatgattccc caaccggatt ccgtcatggc ccgaaatcgc tggtcgataa cgaaacgctg
    15601 gtggtggtat ttgtctcaag ccacccttac acccgtcagt atgatcttga tctgctggct
    15661 gaactcctcc gtgacaacca ggcaatgcgc gtaatcgcca tcgccgcgga aagcaccgac
    15721 atcgtcgctg ccggtccaca tataatcctg ccaccgtcac gtcactttat cgacgttgag
    15781 caggcatttt gcttcctgat gtacgcccag acgtttgcac tgatgcagtc gctgcacatg
    15841 ggtaatacgc cggatacccc atcagccagt ggcaccgtta accgcgtggt gcaaggcgta
    15901 atcattcatc cgtggcaggc ataagaggat cgcattatga gcattatctc cactaaatat
    15961 ctgttacagg acgcccaggc caatggctac gcggtgcctg cctttaacat tcataacgcc
    16021 gagacgatcc aggcgatcca ggcgatcctc gaagtgtgca gtgaaatgcg atcgccggtg
    16081 atcctcgccg gaacgccggg gacctttaaa catatcgcgc tggaagagat ctacgccctg
    16141 tgcagcgcct attccacaac ctacaacatg ccactggcgc tgcatctcga ccaccacgaa
    16201 tcgctggatg atattcgccg taaagtccac gcaggtgtgc gcagtgcaat gatcgacggc
    16261 agccacttcc cgtttgccga gaacgtgaag ctggtgaaat cggttgtcga cttctgccac
    16321 tcccaggatt gcagcgtgga agcagaactg ggccgcctgg gcggtgttga agatgacatg
    16381 agcgttgacg ccgaaagtgc attcctgacc gatccacaag aagctaaacg ctttgtcgaa
    16441 ctgactggcg tcgacagcct ggcggtagcg attggtacgg cgcacggctt atacagcaaa
    16501 acgccgaaga ttgatttcca gcggctggcg gaaattcgtg aagtggtgga tgttcctctg
    16561 gtgctgcatg gtgccagcga tgttccggat gaatttgtcc gtcgcactat tgaacttggc
    16621 gtcacaaaag tgaacgttgc cacagaatta aaaatagcct tcgctggcgc ggttaaagcc
    16681 tggtttgcgg aaaatccaca gggtaatgat cctcgttatt atatgcgcgt cggaatggat
    16741 gcgatgaaag aagttgtcag aaataaaatt aatgtctgtg gttcagcgaa tcgaatttca
    16801 gcataatcat tagtttttta tgatttatcc caatgtactt cccgattaat atcggggagt
    16861 gccttaatgg aaaaggagat aactaaacct taataaatac atcagtacaa tatcgcaaca
    16921 ataatatatt aaaaaaatta tattattcaa ctttatggtg aggattacac aatgagcagt
    16981 ccaaatattc tcttaacccg tattgataac cgtctggttc atggccaggt tggcgtgacc
    17041 tggacatcca ccatcggtgc aaatctgctg gtagtcgtgg atgatgttgt cgctaacgat
    17101 gatattcaac agaaattaat gggtattacc gcagaaacct acgactttgg cattcgtttc
    17161 tttactatcg aaaaaaccat taacgtcatg ggcaaagctg caccgcatca gaagatcttc
    17221 ctgatttgcc gtacgccaca aacggtacgt aaattggtag aaggtggcat tgacctgaaa
    17281 gatgtcaacg tcggcaatat gcatttctcg gaagggaaaa agcaaatcag cagtaaagtt
    17341 tatgtcgatg accaggatct cgcggactta cgttttatta aacaacgtgg cgtcaatgtt
    17401 ttcattcagg acgtccctgg cgatcaaaaa gaacaaatcc ctgactaaat ctaaaatcgc
    17461 cttaatattg gtttgaggta ataaaaatgc atgaaataac cctacttcag ggattatccc
    17521 tggcggcgtt agttttcgtt ctggggattg atttttggct ggaagcctta tttttattcc
    17581 gcccgataat cgtttgtacc ctaactggcg ctattctcgg tgatattcag actggcttaa
    17641 ttaccggtgg tctgacagag ttggctttcg ccggattaac ccctgcaggt ggtgttcagc
    17701 cacccaaccc tattatggcg ggtctgatga ccactgtcat tgcatggtct acgggcgttg
    17761 atgccaaaac ggcaattggt cttggcctgc cgtttagttt gttaatgcag tatgtcattc
    17821 tgttcttcta ttccgctttc tcattattta tgaccaaagc cgataaatgc gcgaaagagg
    17881 cggatacggc agcgttttcc cgacttaact ggacaacgat gctcatcgtt gctttagcgt
    17941 atgcggtgat tgctttcctc tgtacttacc tggcacaagg ggcgatgcag acgctggtga
    18001 aagcgatgcc cgcctggttg acccacggct ttgaagtggc tggcggtatt ctgcctgccg
    18061 ttggttttgg cttgctgctg cgcgtgatgt tcaaagcaca atatatccct tacctgatcg
    18121 ctggcttcct gtttgtttgc tacatccagg tcagcaacct gttgccggtt gccgtactgg
    18181 gcgcaggctt tgcggtgtat gagtttttca atgcgaaatc ccggcagcaa gcgcaaccgc
    18241 agcccgttgc cagtaaaaat gaagaagagg actacagcaa tgggatctga aatcagtaaa
    18301 aaagatatca cccgtctggg ctttcgttcg tcactgctac aagcgagctt taactacgaa
    18361 agaatgcagg cgggcggttt tacctgggcg atgttgccga tcctgaaaaa gatttataag
    18421 gatgacaaac cgggcctaag cgcagcgatg aaagataacc tcgaatttat taatacccac
    18481 ccgaatctgg tcggattcct gatggggtta ttaatttcga tggaagaaaa aggagaaaac
    18541 cgcgacacca ttaaaggcct caaagtggca ctgtttggcc caatcgccgg gattggcgat
    18601 gcgattttct ggtttacttt gttgccgatt atggcgggaa tttgctcatc atttgccagc
    18661 cagggaaacc tgctggggcc gattctattt ttcgccgttt acctgcttat ctttttcctg
    18721 cgcgtcggct ggacccacgt cggttattca gtcggcgtga aggcgatcga taaagtgcga
    18781 gagaactcgc agatgattgc ccgttcggca accatcctcg ggatcacggt aatcggcggg
    18841 ctgatcgctt cgtatgtgca tattaacgtg gtgacatcgt ttgccatcga cagtacccac
    18901 agcgtcgcgc tgcaacagga tttcttcgat aaagtcttcc cgaacatttt accgatggcc
    18961 tacaccctgc tgatgtatta cttcctgcgg gtgaaaaaag cgcatccggt gctgttaatc
    19021 ggcgtgactt ttgtgctctc tattgtttgt tccgcattcg gcattttgta aatggaacga
    19081 ggcactgcgt ctggcggtgc ctctttactt aaggaatttc atcctgtgca aacccttcag
    19141 caagttgaaa actatacggc gttaattgaa cgtgccagcg aatatttatt ggccgtgatc
    19201 cgtagcaaac cggatgccgt gatttgcctg gcgaccggag ccacgccatt actgacgtat
    19261 catt
//
LOCUS       DAJVTL010000085        19105 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.086, whole genome shotgun sequence.
ACCESSION   DAJVTL010000085 DAJVTL010000000
VERSION     DAJVTL010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19105
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.086"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..2519)
                     /gene="mscK"
                     /locus_tag="OQQ26_002839"
                     /pseudo
     CDS             complement(1..2519)
                     /gene="mscK"
                     /locus_tag="OQQ26_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706358.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
     gene            complement(2647..3294)
                     /gene="acrR"
                     /locus_tag="OQQ26_002840"
     CDS             complement(2647..3294)
                     /gene="acrR"
                     /locus_tag="OQQ26_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HCS1858235.1"
                     /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
                     RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
                     EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
                     RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
     gene            3436..4629
                     /gene="acrA"
                     /locus_tag="OQQ26_002841"
     CDS             3436..4629
                     /gene="acrA"
                     /locus_tag="OQQ26_002841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HCS1858236.1"
                     /translation="MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVT
                     VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIAPATYQ
                     ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA
                     KAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
                     RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
                     RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
                     EQSKS"
     gene            4652..7801
                     /locus_tag="OQQ26_002842"
     CDS             4652..7801
                     /locus_tag="OQQ26_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HCS1858237.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
                     IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
                     KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQASLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
                     VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELIEQLASKLPTGVG
                     YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
                     RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKNEDIEHSHTVDHH"
     gene            8347..8721
                     /gene="tomB"
                     /locus_tag="OQQ26_002843"
     CDS             8347..8721
                     /gene="tomB"
                     /locus_tag="OQQ26_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
                     /protein_id="HCS1858238.1"
                     /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAI
                     NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK
                     SGNRLFRCFVNTTKENPASLSC"
     gene            8747..8965
                     /gene="hha"
                     /locus_tag="OQQ26_002844"
     CDS             8747..8965
                     /gene="hha"
                     /locus_tag="OQQ26_002844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HCS1858239.1"
                     /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            9137..9688
                     /gene="maa"
                     /locus_tag="OQQ26_002845"
     CDS             9137..9688
                     /gene="maa"
                     /locus_tag="OQQ26_002845"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HCS1858240.1"
                     /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT
                     LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML
                     APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA
                     VVTKDVPDNVVVGGNPARIIKKL"
     gene            9804..10274
                     /locus_tag="OQQ26_002846"
     CDS             9804..10274
                     /locus_tag="OQQ26_002846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaC family protein"
                     /protein_id="HCS1858241.1"
                     /translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV
                     AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE
                     WYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS"
     gene            10438..11988
                     /gene="pdeB"
                     /locus_tag="OQQ26_002847"
     CDS             10438..11988
                     /gene="pdeB"
                     /locus_tag="OQQ26_002847"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeB"
                     /protein_id="HCS1858242.1"
                     /translation="MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQAETSFIEELNTY
                     SSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNV
                     PQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS
                     FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILP
                     FPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQ
                     DAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPL
                     TLLIIRSVFEDMGDWLRQQPQQHISINLESTVLTSEKIPQLLREMINHDQVNPRQIAL
                     ELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVD
                     ALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDF
                     LRWAEQHL"
     gene            complement(12030..12383)
                     /locus_tag="OQQ26_002848"
     CDS             complement(12030..12383)
                     /locus_tag="OQQ26_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HCS1858243.1"
                     /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
                     DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
                     GKRMIYGGFESIIDE"
     gene            complement(12788..13239)
                     /locus_tag="OQQ26_002849"
                     /pseudo
     CDS             complement(12788..13239)
                     /locus_tag="OQQ26_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000566735.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13440..13667)
                     /locus_tag="OQQ26_002850"
     CDS             complement(13440..13667)
                     /locus_tag="OQQ26_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HCS1858244.1"
                     /translation="MGKDQHVVPHDGGWAVKGAGNSKATSVHSTKQSAVDAARGIATN
                     QKSELVIHNKDGKIAKKDSHGNDPCPPKDKK"
     gene            complement(13885..14505)
                     /locus_tag="OQQ26_002851"
     CDS             complement(13885..14505)
                     /locus_tag="OQQ26_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001572621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1858245.1"
                     /translation="MRVWAYLRASTKEQDADRALKELEAFAHSHDLKISKYFKENESG
                     ASLQRPQLFLLLDIAERGDILLCEQIDRISRLTAEDWKTLRGFIESKGIRVVSLDLPT
                     SHQLLHVQDEFTARMFEAMNSMMLDMLAAISRKDYEDRRRRQKQGIEKAKKEKKYRGR
                     PVDESLQHKVQELLSDGKSWSKIQALIGCSRATIAKVAKNSSLTEE"
     gene            complement(15161..15586)
                     /locus_tag="OQQ26_002852"
     CDS             complement(15161..15586)
                     /locus_tag="OQQ26_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000723064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HCS1858246.1"
                     /translation="MKKILVLLSLVSTTALAKEFSIDVALQQCKNNPAIVSDMAITDY
                     YQVAIKSWDKMLNTEYKQLMSDSESSKEFKDSLKKSQLVWIKYRDLYTDTIKKYYNNE
                     HGSYWGIVGTENIMNITKNKAIELHKLRISNDPSASPDD"
     gene            complement(15588..16490)
                     /locus_tag="OQQ26_002853"
     CDS             complement(15588..16490)
                     /locus_tag="OQQ26_002853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001233896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858247.1"
                     /translation="MRKYLKIGIYGIWGVFLFLASMEKFGDLFAVGTGFWSVVMLSVS
                     GLCQLLASIAAIGWAVLDSGSLRAKYLPYKIVNNYTVPVLIIVLAFVASSARSSSDGA
                     RAQKLGFKDSKEFSIARENNIFNMADYAKFTEELRIKAAEKAAQDATIKERKAKEVET
                     KKQINTVPIEEVIPDALHQKQIFTMIKKYYKGKIYPQDNPKGWVFVRILIQGDTMLYG
                     DNYKRTAKYIGSTDGGYDVFKSNKNNVDEYIGKKHIKHTSYNVVYFNKNNYDLKWKIV
                     IEDSINNDNGIRILSGFVPSINGY"
     gene            complement(17465..18901)
                     /locus_tag="OQQ26_002854"
     CDS             complement(17465..18901)
                     /locus_tag="OQQ26_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001625471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction endonuclease subunit R"
                     /protein_id="HCS1858248.1"
                     /translation="MINPTPIYNKLKYVSAECGSGKTTSICNIINDSTERYILVQNTQ
                     ELIKKTAKQLNNCKYIITDTVSKDESVISSVIEFLSSGSNKTLLITDKTFFKISVELL
                     SGWNVYIDDVTNFHSFQNINEGNTNIKDAILNSLIHNVQSLDDRNMYIKAERKPEIQG
                     EVLKNILNQLPAINENDIFIMNNEYFTDVEKEQLNITAWKDLSKYKDVSITFLGANFE
                     KSLIYKGNKELFESTELEGLLTRKTELKNRLKVYYFSKNHKLSKTWKTNSPDKVQKIY
                     SFIDEKLEGQDFYWTKNKSDSQSLKNGTEISPDAGGFNQYQHLLTCVWLACMRPSETE
                     AKQCELFFGIDGEAIHVAREYESLHQFVLRGISRDFDSTETQTVYVFDEWQARYLTDN
                     IEYIDIGIDDDEQRPRGRPQGSKNKQKRFTLDDKHAKRFRRWKSGNPGLELEAFKVFL
                     ASGNTALSPEEQEAMWNKYKKEVQKSKK"
BASE COUNT         5007 a         4405 c         4250 g         5443 t
ORIGIN      
        1 catggtgacg tttttcacca ccgcagcgcc agcttcagtg ccgttgtaat gccagagcgt
       61 gatgctgtcg agatagctga acacggtgat caaattggac caaattgccc agaacatgac
      121 accgaacagc gcaaacatca gcaacatggt aatacgcagc gtctgctggt taacctgttc
      181 cagtgcaatg gtgggttctt ccggcggttc ggcaccttct gcgccctctt tcaccagatt
      241 ctgccgacgc gccagcgcac gacgccaggc gatacgccgc ccgctacgct taagccgcgc
      301 aataccgtct ggtacagcag gttccagatg atcaccagat aaacggtttc aatccaacgc
      361 ccggagaggc gcagcgtggt gtagaaataa cccgtggcag tcagcaccat caatgcaatc
      421 gggataatcg acagcacggt aatggtgacc agtcgcatgg tgtgcgactc tttatcacgc
      481 cagctttcgc ggcacattgg ccataccagg aaggcaatca gcagcaggtt gaagaaaatc
      541 atcgcctgcc ccagcacatc atccatcaga tgcagcgggg aaagttctgc caccacagac
      601 cagaaatgga taggcagcaa cgcgagactg atgcggacaa tttgccgacg ccagtggctg
      661 gtctgctgtt ccggcatgcc gaagtgacgc acggcaacgc cgttcttctc cagtaccttc
      721 cagcacaggc caaacaccag ccagaaaatc gccagttttt tactgaacga ccatagcagt
      781 tcgctgatgt tgagctgcat ggtcaacaga atcaggccaa ccgcgagaat aatcaggcac
      841 accggcagcg cgcggatcag gtcgataagg atcgcttttg gtgtgttgag ctggctatcg
      901 ttacgcaggg aacccacagc ggaagccagt ttctgttgat acgctttcag ccagcccaga
      961 cgccagtgga tcagcccggc aatcaacagc agcggcaaac cggcgtaaaa acggcaggcc
     1021 aggctttttc ccagttcacc gtgattttca tcgacttaaa ttcatctttc aggctttgcg
     1081 ggaacgcttt gatccagtcc cagtccattg gacggttact gttcacccaa aagatttgct
     1141 gagtcaggat ggatttcagg tttttcgata cgctcattaa ctgctgctgg ttgatttgca
     1201 ggttaatggc catcatcagc tggttaccca actgtttgtt gagttgatcc agcaattcgc
     1261 gacgcatatc aaccacttgc aataacgcat cgtgaacttc gctgttgact tcgttggtgt
     1321 gaccttcttc cagtttgttg acgaacgcat cgctctggaa gagtgcatca cgctgctggt
     1381 taacttcaaa ctgttcgaga cgcaaatccg cgatgcggtt ggtcatgttt tccagttcat
     1441 ccgccgaggg cagcgtttgt tgttgctggt aaaggatacg agacaacagc aggctgccct
     1501 tcaggacggc aatctgctct ttaatattgc gttccgattg cagcgcccgc tccagccagt
     1561 ttttgacttt aatgttttgc tgcatcaact gattaccgtt ttcagtcgca gtaatcagac
     1621 gctgacttaa ctgctggtta atttccagtt cctgcttcac cagcggatta gcctgaatac
     1681 gcgcggcttc atccggggag acggcttcct gcgccgtttt ttcggttaaa gtcaggcgct
     1741 tgctgtttac cgtttcttgc aacagttgta actggtgctc cagacgggcg ctgttcgccg
     1801 tcacgtaatc acgttgcttt tgcaaggtat cctgcaagac ggtgttccct tccaggcttt
     1861 tacgctgctg gtcaatctcc gcattcagca acgcctgctg agcctgcatt aacactttct
     1921 ggctgggacg taaggcagtc tcgccgacat cagtcccatc cagacgactg cgaatttgtt
     1981 gcaactgctg cgaagcgtta tacatcgcat tttgcacgcg ttcgggctgc gtctgtaacg
     2041 aaaccagttg gctgttataa gacgccagat cgttttgtgc gttttgcaaa tcgtccagcg
     2101 cctgggcaac gcgagtttcc aactggcgca acgaaagcgt actcagaatt ttgcgcgttt
     2161 cttcgtcgtt atcgacatcg ctaagtgctg ttaacgccgc ggtcgcctgg cgcatttttt
     2221 ccggcgcttc agcgactttt tgccgtagct gaactgtctc ttctttatat gcgatcgatt
     2281 ttatcgaggg tggctaatgt atctgtcaga tcctgctgca ccagtttgtc ctgagcagaa
     2341 agatcttttt gtttatttag tgagtcaagt tgcgcctgca ggtccgcttt tgtcggcaga
     2401 tcaccattcg atgacgcccg cgcaaacgcc gtgttctggc ataacaagac aaaaacaaaa
     2461 gcaataaatg ctgaaaaaac aaaatgccgt gatcgtttgt aatactggaa catagtcatg
     2521 atgaatgaag gtttctgaac ctgaagaacg acctgaaaaa gtcaaaccgc aagaatatca
     2581 cgacgcagtg aaccagaata gcaacgacga aaatgtccag gaaaaatcct ggagtcagat
     2641 tcagggttat tcgttagtgg caggattacg aagcgtaggg cacaggagat acatctccag
     2701 taagatggcg acgtaatcgc gggcttcttt tttaagatca aaagattgcg gggcaaagag
     2761 ccagttttcc atcaggccgg aaatatagcc gcgcataata attgctgccc gacgcgtcat
     2821 taaatccgca ggcaacattt tcgcttcaat acaatgtttt aacgtttgtt ctatacggtc
     2881 ataactttcc agacagagat tacgttgtgc ctgttgcaca acagccattt ctccgacaaa
     2941 ttcgcatttg tggaatataa tctccatcaa taatcgacgt cgttcttctg tcaccgtgga
     3001 ttcaagaaca tgaattaata tctctcttaa tactgagagt ggatcgccag ggaattttgc
     3061 ctgatactca agctctagtt caccaatatt ggattctgac agttcccaga tctcactgaa
     3121 caaatccgac ttgtctttaa aatgccagta gattgcaccg cgcgtaacgc cagctgcttt
     3181 tgcaatctcg cccagcgagg tggatgatac cccctgctgt gagaaaagac gtagagccac
     3241 atcgaggatg tgttggcgcg tttcttgcgc ttcttgtttg gtttttcgtg ccatatgttc
     3301 gtgaatttac aggcgttaga tttacataca tttgtgaatg tatgtaccat agcacgacga
     3361 taatataaac gcagcaatgg gtttattaac ttttgaccat tgaccaattt gaaatcggac
     3421 actcgaggtt tacatatgaa caaaaacaga gggtttacgc ctctggcggt cgttctgatg
     3481 ctctcaggca gcttagccct aacaggatgt gacgacaaac aggcccaaca aggtggccag
     3541 cagatgcccg ccgttggcgt agtaacagtc aaaactgaac ctctgcagat cacaaccgag
     3601 cttccgggtc gcaccagtgc ctaccggatc gcagaagttc gtcctcaagt tagcgggatt
     3661 atcctgaagc gtaatttcaa agaaggtagc gacatcgaag caggtgtctc tctctatcag
     3721 attgctcctg cgacctatca ggcgacatac gacagtgcga aaggtgatct ggcgaaagcc
     3781 caggctgcag ccaatatcgc gcaattgacg gtgaatcgtt atcagaaact gctcggtact
     3841 cagtacatca gtaagcaaga gtacgatcag gctctggctg atgcgcaaca ggcgaatgct
     3901 gcggtaactg cggcgaaagc tgccgttgaa actgcgcgga tcaacctggc ttacaccaaa
     3961 gtcacctctc cgattagcgg tcgcattggt aagtcgaacg tgacggaagg cgcattggta
     4021 cagaacggtc aggcgactgc gctggcaacc gtgcagcaac ttgatccgat ctacgttgat
     4081 gtgacccagt ccagcaacga cttcctgcgc ctgaaacagg aactggcgaa tggcacgctg
     4141 aaacaagaga acggcaaagc caaagtgtcg ctgatcacca gtgacggcat taagttcccg
     4201 caggacggta cgctggaatt ctctgacgtt accgttgatc agaccactgg gtctatcacc
     4261 ctacgcgcta tcttcccgaa cccggatcac actctgctgc cgggtatgtt cgtgcgcgca
     4321 cgtctggaag aagggcttaa tccaaacgct attttagtcc cgcaacaggg cgtaacccgt
     4381 acgccgcgtg gtgatgccac cgtactggta gttggcgcgg atgacaaagt ggaaacccgt
     4441 ccgatcgttg caagccaggc tattggcgat aagtggctgg tgacagaagg tctgaaagca
     4501 ggcgatcgcg tagtaataag tgggctgcag aaagtgcgtc ctggtgtcca ggtaaaagca
     4561 caagaagtta ccgctgataa taaccagcaa gccgcaagcg gtgctcagcc tgaacagtcc
     4621 aagtcttaac ttaaacagga gccgttaaga catgcctaat ttctttatcg atcgcccgat
     4681 ttttgcgtgg gtgatcgcca ttatcatcat gttggcaggg gggctggcga tcctcaaact
     4741 gccggtggcg caatatccta cgattgcacc gccggcagta acgatctccg cctcctaccc
     4801 cggcgctgat gcgaaaacag tgcaagacac ggtgacacag gttatcgaac agaatatgaa
     4861 cggtatcgat aacctgatgt acatgtcctc taacagtgac tccacgggta ccgtgcagat
     4921 caccctgacc tttgagtctg gtactgatgc ggatatcgcg caggttcagg tgcagaacaa
     4981 actgcagctg gcgatgccgt tgctgccgca agaagttcag cagcaagggg tgagcgttga
     5041 gaaatcatcc agcagcttcc tgatggttgt cggcgttatc aacaccgatg gcaccatgac
     5101 gcaggaggat atctctgact acgtagcggc gaatatgaaa gatgccatca gccgtacgtc
     5161 gggcgtgggt gatgttcagt tgttcggttc acagtacgcg atgcgtatct ggatgaaccc
     5221 gaatgagctg aacaaattcc agctaacgcc ggttgatgtc attaccgcca tcaaagcgca
     5281 gaacgcccag gttgcggcgg gtcagctcgg tggtacgccg ccggtgaaag gccaacagct
     5341 taacgcctct attattgctc agacgcgtct gacctctact gaagagttcg gcaaaatcct
     5401 gctgaaagtg aatcaggatg gttcccgcgt actgctgcgt gatgtggcga agattgagct
     5461 gggtggtgag aactacgaca tcatcgcaga gtttaacggc caaccggctt ccggtctggg
     5521 gatcaagctg gcgaccggtg caaacgcgct ggataccgct gcggcaatcc gtgctgaact
     5581 ggcgaagatg gaaccgttct tcccgtcggg tctgaaaatt gtttacccgt acgacaccac
     5641 gccgttcgtg aaaatctcta ttcacgaagt ggttaaaacg ctggtcgaag cgatcatcct
     5701 cgtgttcctg gttatgtatc tgttcctgca gaacttccgc gcgacgttga ttccgaccat
     5761 tgccgtaccg gtggtattgc tggggacctt tgccgtcctt gccgcctttg gcttctcgat
     5821 aaacacgcta acaatgttcg ggatggtgct cgccatcggc ctgttggtgg atgacgctat
     5881 cgttgtggta gaaaacgtgg agcgtgtgat ggcggaagaa ggtttgccgc caaaagaagc
     5941 cacccgtaag tcgatggggc agattcaggg cgctctggtc ggtatcgcga tggtactgtc
     6001 ggcggtattc gtaccgatgg ccttctttgg cggttctact ggtgctatct atcgtcagtt
     6061 ctctattacc attgtttcag caatggcgct gtcagtactg gtggcgttga tcctgactcc
     6121 ggctctttgt gccaccatgc tgaaaccgat tgccaaaggt gatcacgggg aaggtaaaaa
     6181 aggcttcttc ggctggttta accgcatgtt cgagaagagc acgcaccact acaccgacag
     6241 cgtaggcggt attctgcgca gtacagggcg ttacctggtg ctgtatctga tcatcgtggt
     6301 cggcatggcc tatctgttcg tgcgtctgcc aagctccttc ttgccagatg aggaccaggg
     6361 cgtatttatg accatggttc agctgccagc aggtgcaacg caggaacgta cgcagaaagt
     6421 gctcaatgag gtaacgcatt actatctgac caaagaaaag aacaacgttg agtcggtgtt
     6481 cgccgttaac ggcttcggct ttgcgggacg tggtcagaat accggtattg cgttcgtttc
     6541 cttgaaggac tgggccgatc gtccgggcga agaaaacaaa gttgaagcga ttaccatgcg
     6601 tgcaacacgc gctttctcgc aaatcaaaga tgcgatggtt ttcgccttta acctgcccgc
     6661 aatcgtggaa ctgggtactg caaccggctt tgactttgag ctgattgacc aggctagcct
     6721 tggtcacgaa aaactgactc aggcgcgtaa ccagctgctt gcagaagcag cgaagcatcc
     6781 tgatatgttg accagcgtac gtccaaacgg tctggaagat accccgcagt ttaagattga
     6841 tatcgaccag gaaaaagcgc aggcgctggg tgtttctatc aacgacatta acaccactct
     6901 gggcgctgca tggggcggca gctatgtgaa cgactttatc gaccgcggtc gtgtgaagaa
     6961 agtttatgtc atgtcagaag cgaaataccg tatgctgccg gatgatatcg gcgactggta
     7021 tgttcgtgct gctgatggtc agatggtgcc gttctcggcg ttctcctctt ctcgttggga
     7081 gtacggttcg ccgcgtctgg aacgttacaa cggcctgcca tctatggaaa tcttaggcca
     7141 ggcggcaccg ggtaaaagta ccggtgaagc aatggagctg atagaacaac tggcgagtaa
     7201 actgcctact ggtgttggct atgactggac ggggatgtcc tatcaggaac gtctctccgg
     7261 caaccaggca ccttcactgt acgcgatttc gttgattgtc gtattcctat gtctggcggc
     7321 gctgtacgag agctggtcga ttccgttctc cgttatgctg gtcgttccgc tgggggttat
     7381 cggtgcgttg ctggctgcca ccttccgtgg cctgaccaat gacgtttact tccaggtagg
     7441 cctgctcaca accattgggt tgtcggcgaa gaacgcgata cttatcgtcg aattcgccaa
     7501 agacttgatg gataaagaag gtaaaggtct gattgaagcg acgcttgatg cggtgcggat
     7561 gcgtttacgt ccgatcctga tgacctcgct ggcgtttatc ctcggcgtta tgccgctggt
     7621 tatcagtact ggtgctggtt ccggcgcgca gaacgcagta ggtaccggtg taatgggcgg
     7681 gatggtgacc gcaacggtac tggcaatctt cttcgttccg gtattctttg tggtggttcg
     7741 ccgccgcttt agccgcaaga atgaagatat cgagcacagc catactgtcg atcatcattg
     7801 atacaatgtg taatcactaa ggccgcgtaa gcggcctttt ttatgcataa cctacgaaca
     7861 ttaaggagta attcaacaac caactcagga tctcatacga aaaccagtat taatttcgca
     7921 taaaattcat aaaaaatact gattgttagt taatttatat taagtagcgc taatagattt
     7981 aataatccat aatcatttag aggctattct taattatttg cggtaattct ttattcattc
     8041 ctcggttatt acgtcatatt cagagcaatc ctggtattag tgtcaccaat ttcatctggc
     8101 gataatcctg aaatgttatg aatagttcga gcagactgct tttacctgct gcgggttagt
     8161 gctagtatga aaaagtgagt cctgtcccga ttccttccta attgtaattt ttcgtaataa
     8221 tgcgatgaaa acctgcaaag agtggcttat agttaagcta acaaacgaga gggcaagtcc
     8281 aggtcagtaa gttttttcca tcccgaaagg tgtccgttag ttcaaccact aagaagggga
     8341 cgcgttatgg atgaatactc acccaaaaga catgatatcg cacagcttaa gtttctctgt
     8401 gaaaccctgt atcatgactg ccttgcaaac cttgaagaaa gcaatcatgg ctgggttaac
     8461 gacccaacct cggcgatcaa cctccagttg aatgaactga ttgagcatat tgcgaccttc
     8521 gcacttaatt acaaaattaa gtataatgaa gacaataagc tcattgagca gatcgacgaa
     8581 tatctggatg acacctttat gttgttcagt agttatggta ttaatatgca ggatcttcag
     8641 aaatggcgga agtcaggtaa tcgactattc cgttgttttg tcaatacgac gaaagagaat
     8701 cctgcgagtt tatcttgtta gaattattac aaccatgggt agaagtatgt ccgaaaaacc
     8761 tttaacgaaa accgattatt taatgcgttt acgtcgttgc cagacaattg acacgctgga
     8821 gcgtgttatc gagaaaaata aatacgaatt atcagataat gaactggcgg tattttactc
     8881 agccgcagat caccgcctcg ccgaattgac catgaataaa ctgtacgaca agatcccttc
     8941 ctcagtatgg aaatttattc gctaataaat aattcgcttt cggagctata accggctgtt
     9001 tattaagaat tttatacttt ttcgccatga agacataccc tatgtgatct ttatcacaca
     9061 gatgtaatgg gaacgttctc ttcactgact tttcgtctta ctgtgttgcc gcattttcag
     9121 caaccggagg tcagtaatga gcacagaaaa agaaaagatg attgctggtg agttgtatcg
     9181 ctcggcagat gagacgttat ctcgcgatcg cctgcgcgct cgtcagctta ttcaccgata
     9241 caatcattcc ctggcagaag agcacacatt acgccagcaa attctcgctg atctattcgg
     9301 tcaggtgaca gaggcttata ttgagccaac gtttcgctgt gactatggct ataacatttt
     9361 tctcggtaat aattttttcg ccaacttcga ttgcgtgatg cttgatgtct gccctattcg
     9421 catcggtgat aactgtatgt tggcaccagg cgttcatatc tacacggcaa cacatcccat
     9481 cgaccctgta gcacgtaata gcggtgctga actggggaaa cccgtcacca tcggtaataa
     9541 cgtctggatt ggcggacgcg cggtcattaa ccctggtgtg accattggtg ataacgtcgt
     9601 ggtagcctca ggtgcagttg tcacaaaaga tgtcccggac aacgttgtcg tgggcggtaa
     9661 tccagccaga ataattaaaa aattgtaatc ggtttttcgc aactgttatg caaaattgtg
     9721 gcaaacctgt tactttccct ttactattcc cacgttaaaa tagggtgttc cttggaaagt
     9781 tacagatacc acgaaggcaa acgatgaccg aaatacaacg cctgctgacc gaaacgattg
     9841 agtctctgaa tacccgcgaa aaacgcgaca acaaaccccg ctttagtatc agttttatcc
     9901 gtaaacatcc ggggctgttt atcggtatgt acgttgcttt ttttgccacc ctggcggtga
     9961 tgttgcagtc cgaaacgctt tcaggctctg tctggctact ggttgtatta tttatcctgc
    10021 ttaatggttt cttctttttc gatgtctacc cacgctaccg ctatgaagat atcgacgtgc
    10081 tggatttccg cgtttgctat aacggcgaat ggtacaacac gcgctttgta cctgccgcgc
    10141 tggttgaagc catcttgaac tctccgcgtg tcgcggatgt tcataaggaa caactgcaaa
    10201 aaatgatcgt ccgtaaaggt gaactgtctt tttacgatat ttttaccctc gctcgcgccg
    10261 aatcaacatc ttaagttagg gttacatacc aggcgtaaag ctctgcgcct ggtcaaatga
    10321 caatgatcgt ttccacccat cacttcatga aataccagct ctacctcctt atctcctgcc
    10381 agcctttttc cacaatcaga tatactttcc ctacactgtg ttaataagga tatgctggtg
    10441 agaacacgac atctggtcgg ccttatttcg ggagtactga ttctttcagt attgctgcct
    10501 gtcggcttaa gcatctggct ggcccatcag caggcagaaa catcgtttat tgaagagctg
    10561 aatacctatt cctcccgcgt cgctattcgg gccaataagg tggcgacaca agggaaagat
    10621 gcgctgcaag agctggaaag atggcaaggc gctgcctgta gcgaagccca tctcatggaa
    10681 atgcgtcggg tatcttacag ttatcgctat attcaggaag tggtttatat cgataacaac
    10741 gttccccagt gttcgtctct ggagcatgaa agtccgcccg ataccttccc cgagccaggt
    10801 aaaatttcga aagatggtta tcgtgtctgg ttaacatcgc ataacgattt aggcattatc
    10861 cgttacatgg tcgccatggg aacggcacat tatgtcgtca tgatcgaccc cgcttccttt
    10921 attgatgtca ttccctatag ctcatggcaa attgatgccg ccattattgg caatgcccat
    10981 aacgttgtca taaccagcag cgatgaaatt gctcagggaa ttattaccag gctacaaaaa
    11041 acacccggtg agcatatcga aaataatgga atcatttacg atatcctgcc cttcccggag
    11101 atgaatattt cgatcatcac ctgggcttca acgaaaatgt tgcagaaagg ctggcatcgg
    11161 caagtcttta tttggttacc gctcgggttg gtgattggcc tgctggcagc gatgtttgtg
    11221 ctgcgtattt tgcgccgtat ccagtcaccg catcatcggc tgcaggatgc tatcgaaaat
    11281 cgtgatattt gcgtgcacta tcagccgatt gtctccttag ccaatggcaa aattgtcggt
    11341 gctgaggcac tggcgcgctg gccgcagaca gacggtagtt ggttgtcacc agatagtttt
    11401 attccgctgg cacagcaaac gggcctttct gagccattga cgctactgat tataagaagc
    11461 gtctttgaag atatgggcga ctggctgcgt cagcagccac agcagcatat ttcgatcaat
    11521 cttgaatcca ccgtgctcac ctcggaaaaa atcccgcaat tgctgcgtga aatgatcaat
    11581 cacgatcagg ttaatcccag acagatcgcg cttgaactca ctgaacgcga gtttgccgat
    11641 ccgaaaacca gcgccccgat aatttctcgc taccgggagg cgggccatga aatttatctt
    11701 gatgattttg gtacggggta ttcaagttta agttatttac aggatctgga tgtcgacatt
    11761 ctgaagatcg ataaatcttt cgttgatgcg ctggaatata aaaatgtcac gccgcatatc
    11821 atcgaaatgg caaaaacact gaaactgaaa atggtagcgg agggaatcga aaccagtaaa
    11881 caagaagagt ggctacgcca gcatggcgtg cactacggtc agggctggct ctacagcaag
    11941 gcattaccga aagaggattt cttacgctgg gccgagcaac atttgtgaat ttttgggctg
    12001 acggcacgcc gcacagcccg tcacgctacc tactcgtcga tgattgactc gaatccgcca
    12061 tagatcattc gcttaccatc aaacggcatg gactcgccga actctttcat ccgtgggtcc
    12121 gacatcatct tttgattagc agcgtcgcgg acctcttttg aagggtattc aatccagcta
    12181 aagacaacct cttcattctc ttccgctttc accgccatac gaaaatcggt cactttgcca
    12241 tccggtacat cgctggccca gcattcgaca atacgaagcg cgccaaactc tttaaacaat
    12301 ggcgcagcct tagcggccat ttcccgatag gcatcctttt tatcggcagg aacggcaacc
    12361 acaaaaccat caacatactt catcagacat acctccgaag cgcactgcgc agccagacaa
    12421 ttcttgcgac gtcagttgtg gttaaagttt agccatgttg ggattttttg acgaaacggt
    12481 gggaggcaga aatgggtggg ggccctgcca tcagccatta gtactaaatt gtgttggtta
    12541 atcaattggt tatagtggta gtactacaac agtactgtac cactctcgat agtaccgtcc
    12601 agcacaaaat cttgcaagtt aacgtgtcgg gggaagtagg atgagagtca taagatttac
    12661 attgagcacc agcatgacgg tagcctatgt aaagcaatgg gagtccacat ttatctgata
    12721 tgcgttaagc gaatgctaaa tcttgaattg gatgaaagcg taagaaaagg atggctcaaa
    12781 gacatcttta acaggctatg ccaccatatg ctttgcttac ttcatgatga ctttccccgc
    12841 aagctcttaa aataataagt gcattccgca ttagagcttc actgcgttca ggttcaaacc
    12901 attcgccgtt gaatttaccg ccatgaaaga ggttgttcct tacacgacgt atcaggatta
    12961 aaattttttt gcgatgattt tttcttcaat gggagtctga tcccatgcaa gcacaccatc
    13021 attaacaacc tgttttttgg gagggaaatt taaaaaatat tcgattgcag ctttaagctc
    13081 aggatcttct ggtgactcaa agacatgagt aaccgccata gcgtacatat cccaatttgc
    13141 tttagcatct ctggtattga atcgaaaacc agtggctttt agacagtact catagcgtgc
    13201 aaactctcgg aaaaactcat aacacagatt gtctatcatc gagatttcct agttggttaa
    13261 tatccgctca aacatacaat aacctaacgg tatagatagc aagataacat attaactaaa
    13321 tttcacttta gtaatgacgt cgaatgaaat attagtcacc acacgaaact aagtagtgtt
    13381 gcactctcat aactcttgtt cggtaaaaat ttaaaagggg cgattaagcc cctctagggc
    13441 tacttcttgt cttttggcgg acaaggatcg ttgccatgag aatctttttt cgcaatcttg
    13501 ccatccttgt tatggatcac aagctcactt ttttgatttg tagcaatccc tcttgcagcg
    13561 tccaccgcag attgctttgt tgagtgaacg gaggtggctt tactgtttcc tgcccccttg
    13621 acggcccaac ctccatcatg aggaacaaca tgctgatctt tacccattat cgaaccctct
    13681 attttcatgg aaaaatcaac atatagtgac atcaccaatt attcaatact acatattgtg
    13741 cttaaattga ttttcatcac aaaacatgga tagatatcga aaggattctt ttactacaaa
    13801 actgtaagta cccttcctta accctatacc gctacatctg ttcataatct ggcagtgctg
    13861 gcatactctg ccctttatta cccactattc ttctgtaaga gacgagtttt tagccacctt
    13921 tgcgatagta gctcttgaac aaccgatcaa agcctggatt ttgctccagc ttttaccgtc
    13981 agacagcagt tcttgtactt tatgctgcaa gctctcatcg actggacgac cacgatactt
    14041 tttctctttc ttggcctttt caataccctg cttttgtcgt ctgcggcgat cttcatagtc
    14101 cttgcgactg attgccgcca acatatcgag catcatagaa ttcattgctt caaacatacg
    14161 tgcggtgaac tcatcctgaa catgcaaaag ctgatggctc gtaggcaaat ctaacgatac
    14221 aaccctgatc cctttagact cgatgaatcc tcgtaaggtt ttccagtcct ctgcggtaag
    14281 tctgcttata cgatctattt gctcacagag aagaatatcg ccacgttccg cgatatctaa
    14341 gagtaaaaac aattgaggac gctgtaggct tgcacctgat tcattttctt taaagtactt
    14401 ggatattttt agatcatgtg aatgagcaaa tgcctccaac tctttcaatg cccgatccgc
    14461 atcttgctct ttcgtcgatg ctcttagata tgcccataca cgcatgatag tcaccatcag
    14521 tctgttttat atggttcatt atatatagtc tgttttatgt tgtaaaatcc atttaatgaa
    14581 ccaatttgaa tgaagatctg tgcaggtctg cttgaggtat acttaaaaat agacgtttat
    14641 tcgtttattt tttagtcaac atcattttcc ataaaaagcc gatgatgtgc tttaagtacg
    14701 cagcattagg tcggtggggt tgaagctgat caggtgaacg agattttaaa tcaggtggaa
    14761 aaaaacagac tgctctttta tctcagtaaa cgatcccttt agattttttg tcaaaaatcg
    14821 ggatgcctag gatttggtta ttttgtgttc tgaaggcagg taactttagt gagcgagaaa
    14881 aaggccgtaa atagcggcct ttacctgtaa taaacaaaat tattaattaa ctctaatcac
    14941 attaccttta ccatcaatag tgacttttat tatttttgag caattccgat actgaccgac
    15001 accagctcca tttttggaaa cgccggtttg aacggttgta gtactttggc aatgcgggca
    15061 tacgatcgta aaataattag acataataca tcctgtgttg tttatatttt tcttactgac
    15121 cttgagttat tcaataaagc ctacttatga aagattataa tcaatcatca ggactggcgg
    15181 aaggatcatt actgatacgt agcttatgta attcaatagc tttgtttttt gttatattca
    15241 taatattttc agtaccaacg attccccaat aagaaccgtg ctcattatta tagtatttct
    15301 taatggtatc agtatataga tctctgtact taatccatac aagctgtgat tttttaagac
    15361 tatccttgaa ctctttactt gattctgaat ctgacattaa ttgtttgtat tcagtattaa
    15421 gcattttatc ccacgattta atcgccactt ggtaataatc agtaatagcc atatcagaaa
    15481 cgattgcagg attattctta cattgttgta atgctacatc tattgaaaat tctttcgcta
    15541 aagctgtagt acttacaagc gataataaca ctaatatttt tttcatatta atacccgttt
    15601 attgaaggaa caaatccact cagaatacgt attccattat cattattaat gctatcttct
    15661 ataactattt tccattttaa atcataatta tttttattaa aatacactac attgtatgat
    15721 gtgtgtttta tatgcttttt accaatatat tcatctacgt tattcttgtt acttttaaat
    15781 acatcataac caccatctgt actgccaatg tattttgctg ttcgcttgta gttatcgcca
    15841 tacaacatag tatctccctg aattaaaatt cttacaaata cccatccttt tggattatct
    15901 tgtggatata ttttcccttt gtaatacttt tttatcatag taaaaatttg cttttgatgt
    15961 aacgcatcgg gaatcacttc ttcaatggga acagtattta tctgtttctt ggtctcgacc
    16021 tctttcgctt ttcgctcttt aatagttgca tcctgagctg ccttttctgc tgctttgatg
    16081 cgtagttcct cggtgaattt ggcatagtca gccatattaa aaatattatt ttcacgagcg
    16141 atagaaaact ctttactatc tttaaaacca agtttttgtg ctctggctcc atcgcttgaa
    16201 gatcgggcag aacttgccac gaatgcaagc acaatgatca gtacaggaac cgtataatta
    16261 ttaacgattt tatagggtaa gtacttagcc cggagagaac cggaatccaa aacagcccaa
    16321 cctattgcgg caatacttgc cagtagctga cataatccag aaacggaaag catgactacc
    16381 gaccagaagc ctgtaccgac tgcgaaaaga tcaccaaatt tctccattga cgcaagaaat
    16441 aaaaacactc cccaaatgcc ataaattcct atttttaaat atttacgcac cgtaattatc
    16501 ctttaataat tttccaaatc gatggttcgt tctatttgta ttatcgacaa taatttgttt
    16561 gcctttagtc tgtcccttaa aaaaccccta aaatttatgg attagcagtt gtaccactct
    16621 cactgtttta tcactcccat tatcttctct caggccaaaa gtacggactt aaagccgtcc
    16681 gtgttcaggt gcctaagagt agcaccatat caatcaagta tcgacaataa cgatcaatta
    16741 atggccattg atcgttatta cctatcaaag gctattaatt caatactgat caataggtga
    16801 aatcgatcaa gtggattcgt catccatgaa aggtgttatg tatctgattt caatacggag
    16861 agtattggcg ataccatcac gcaaacgctc ttaaagcgtc gctacggcgt tttgtagggt
    16921 tttggagatc cagatgtgtc agcaatggac atcgcattca ggggcttcct gtgcgttttg
    16981 tcagaaacac catcatgaag ggggacagtt cggatcggga tcgcttcgct ctggtcagta
    17041 ctgacagggc ttttccagta actggaacag cagatacccc actaagtaca caaaggaatt
    17101 atttgtagaa taagtaatga aataacagtc aattatgtac ttactgacag aactaaaaac
    17161 gcgattaggt tcactctgtc agtgaccgaa gggaacgcag cagtagaacc taatccagcg
    17221 aaaagtacac gcaaagcggg tgctgtttaa ttgttttatc tatttaaaca atgagatagc
    17281 tatcaagtac tcactgcatg agaactctca ctaactaccc gaaacagttc gcttgcttcg
    17341 ccgctcctac tttcaggtag ttaattcgct ttcgctctgt gatgtccgaa atttattacc
    17401 tatataatat tataaggtat tatttaccgg acatttatgt atttttatga tggtgttctg
    17461 gacatcattt tttgcttttt tgtacttcct ttttgtattt gttccacata gcctcttgct
    17521 cttcgggact gagtgctgta ttaccactgg caagaaacac cttgaacgct tctaactcaa
    17581 gccctgggtt gccgcttttc cagcggcgaa aacgcttagc gtgtttatca tcaagagtga
    17641 aacgcttttg cttattcttt gaaccttgcg gcctgcctct cggcctctgc tcatcatcat
    17701 caataccgat gtctatatac tcaatattat ctgtaagata tctggcttgc cattcatcaa
    17761 aaacataaac agtctgtgtt tcagtactgt caaaatccct tgaaattcct cgtagtacga
    17821 actggtgtaa actttcgtac tccctcgcaa catgtatcgc ctcgccgtca atcccaaaga
    17881 acaattcgca ctgtttagcc tccgtttcag agggacgcat acaagcgagc cagacgcacg
    17941 taagcaagtg ttggtactgg ttaaaccctc cggcatccgg gcttatctct gtgccgtttt
    18001 tgaggctctg agaatcgctt ttgttcttcg tccagtagaa atcctgcccc tcaagtttct
    18061 catcaataaa tgagtatatt ttttgtactt tatcagggct attagtcttc catgtctttg
    18121 atagtttgtg gttttttgag aagtaataaa cttttaatct gtttttgagt tcagtttttc
    18181 gtgtcagtaa tccttcaagt tcagtacttt caaagagttc tttattgcct ttatagatca
    18241 atgacttttc aaaattcgct ccgagaaagg tgattgatac gtctttgtac ttactgagat
    18301 ctttccatgc ggtaatatta agctgttcct tttccacatc ggtaaagtac tcattattca
    18361 tgatgaatat atcattttcg ttaattgctg gtagctggtt caaaatattc ttcagtactt
    18421 ccccttgtat ttctggtttt ctttcagcct taatatacat atttctatca tctaatgatt
    18481 gtacattgtg tattaatgaa ttaagaattg catcttttat attagtatta ccctcattaa
    18541 tattctgaaa agaatgaaaa ttagttacat catcaatata aacattccag ccggacaata
    18601 attcaacaga aattttaaaa aaggttttgt ctgtgataag taatgtttta ttgcttccag
    18661 atgaaagaaa ttcaataact gaactaataa cactttcatc ttttgatact gtatccgtaa
    18721 taatatactt acagttatta agttgctttg cagtcttttt aataagttct tgtgtgttct
    18781 gtactaaaat atatctttca gtactgtcat tgattatatt acatatagaa gtagttttac
    18841 cagaaccaca ctcagcagat acatatttta atttgttata aataggtgta ggattaatca
    18901 tttgcacgct ccatattgat taatttagaa aggccgattc gttccagtga gtcggccttt
    18961 cgttgttttt gttgttttta tttagacgaa ataaattatc ccatcaactg atgatagtac
    19021 tgattagaga attattcatt ataaagtact caagccgatt agtttacttc aattagttaa
    19081 tccgattgat ttagataaat tatct
//
LOCUS       DAJVTL010000086        18984 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.087, whole genome shotgun sequence.
ACCESSION   DAJVTL010000086 DAJVTL010000000
VERSION     DAJVTL010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18984
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.087"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(33..221)
                     /locus_tag="OQQ26_002855"
                     /pseudo
     CDS             complement(33..221)
                     /locus_tag="OQQ26_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709655.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobB"
     gene            complement(203..787)
                     /gene="mobA"
                     /locus_tag="OQQ26_002856"
     CDS             complement(203..787)
                     /gene="mobA"
                     /locus_tag="OQQ26_002856"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HCS1858249.1"
                     /translation="MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALM
                     TQLSHVVVNANRHQEIYQASGLKVIEDSLADYLGPLAGMLSVMQQEAGEWFLFCPCDT
                     PYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAF
                     MRLAGGHAVDFSDNKDAFINVNTPEELARWQEKR"
     gene            857..1126
                     /locus_tag="OQQ26_002857"
     CDS             857..1126
                     /locus_tag="OQQ26_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HCS1858250.1"
                     /translation="MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELAD
                     LTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE"
     gene            1203..2189
                     /gene="srkA"
                     /locus_tag="OQQ26_002858"
     CDS             1203..2189
                     /gene="srkA"
                     /locus_tag="OQQ26_002858"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response kinase SrkA"
                     /protein_id="HCS1858251.1"
                     /translation="MNNSAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY
                     FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
                     EDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDL
                     DDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVY
                     YLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY"
     gene            2206..2832
                     /gene="dsbA"
                     /locus_tag="OQQ26_002859"
     CDS             2206..2832
                     /gene="dsbA"
                     /locus_tag="OQQ26_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HCS1858252.1"
                     /translation="MKKIWLALAGLVLAFSTSAAQYEDGKQYTTLEKPVAGAPQVLEF
                     FSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG
                     VEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKTLVAQQEKA
                     AADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK"
     gene            2987..4425
                     /locus_tag="OQQ26_002860"
                     /pseudo
     CDS             2987..4425
                     /locus_tag="OQQ26_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418298.4"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
     gene            complement(4466..5398)
                     /locus_tag="OQQ26_002861"
     CDS             complement(4466..5398)
                     /locus_tag="OQQ26_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HCS1858253.1"
                     /translation="MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVK
                     LLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICN
                     HRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRH
                     PERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIA
                     MALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYIN
                     DKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK"
     gene            5762..8548
                     /gene="polA"
                     /locus_tag="OQQ26_002862"
     CDS             5762..8548
                     /gene="polA"
                     /locus_tag="OQQ26_002862"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HCS1858254.1"
                     /translation="MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
                     GPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL
                     DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA
                     PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL
                     EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL
                     LVEVGSGENWDQAH"
     gene            complement(8930..9562)
                     /locus_tag="OQQ26_002863"
     CDS             complement(8930..9562)
                     /locus_tag="OQQ26_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HCS1858255.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE"
     gene            10146..10655
                     /gene="yihI"
                     /locus_tag="OQQ26_002864"
     CDS             10146..10655
                     /gene="yihI"
                     /locus_tag="OQQ26_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HCS1858256.1"
                     /translation="MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGS
                     RAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELL
                     ETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
                     DMMRLLRGN"
     gene            10844..12217
                     /gene="hemN"
                     /locus_tag="OQQ26_002865"
     CDS             10844..12217
                     /gene="hemN"
                     /locus_tag="OQQ26_002865"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HCS1858257.1"
                     /translation="MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAG
                     RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
                     LTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     CYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQW
                     DLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARM
                     QQFSRVI"
     gene            complement(12446..12556)
                     /locus_tag="OQQ26_002866"
     CDS             complement(12446..12556)
                     /locus_tag="OQQ26_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HCS1858258.1"
                     /translation="MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS"
     gene            complement(12668..14077)
                     /gene="glnG"
                     /locus_tag="OQQ26_002867"
     CDS             complement(12668..14077)
                     /gene="glnG"
                     /locus_tag="OQQ26_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HCS1858259.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAE
                     STSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
                     LLGWGRNTLTRKLKELGME"
     gene            complement(14089..15138)
                     /gene="glnL"
                     /locus_tag="OQQ26_002868"
     CDS             complement(14089..15138)
                     /gene="glnL"
                     /locus_tag="OQQ26_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HCS1858260.1"
                     /translation="MATGTQPDAGQILNSLINSILLINDNLAIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG
                     MILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
                     DPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNV
                     RLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            complement(15344..16753)
                     /gene="glnA"
                     /locus_tag="OQQ26_002869"
     CDS             complement(15344..16753)
                     /gene="glnA"
                     /locus_tag="OQQ26_002869"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HCS1858261.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGTWN
                     SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
                     KNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            17126..18949
                     /gene="typA"
                     /locus_tag="OQQ26_002870"
     CDS             17126..18949
                     /gene="typA"
                     /locus_tag="OQQ26_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HCS1858262.1"
                     /translation="MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAI
                     TGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDD"
BASE COUNT         4957 a         4626 c         4819 g         4582 t
ORIGIN      
        1 agaattccat atctatctta aataattttg cgcgctttac gcagctcata gctatctttg
       61 cccggtttat caacatccat atcatggtgc gtatgcttaa tcagccctgg acggatccct
      121 ctggcgcata atgccgggat cagttttttc aaaagcgtag tttttccggt accactccac
      181 gcggcaaagg cgagtaacgg tatcatcgtt tttcctgcca tcgggcaagc tcctctggcg
      241 tattcacgtt aataaatgca tctttattat cgctgaaatc aaccgcatga ccgccagcca
      301 gacgcataaa tgccattacc cggcgttctc ctgcttgcag atattccagt aataaaggct
      361 caattgcgcg gtttaccaga gcaatagtcg ggtgatcgcg ttcaccgtcg tggacccaca
      421 cgacaggcgc atctttgcgc tgatgattaa gccgggctgc taaatcaggg ggaatgtaag
      481 gcgtatcgca tgggcaaaac aaaaaccact cccccgcttc ctgctgcatt actgaaagca
      541 ttcctgccag agggcctagg taatccgcca gtgaatcttc aatcactttc agaccgcttg
      601 cctgatagat ttcctgatga cgattagcat taaccacgac gtgagagagc tgcgtcataa
      661 gcgcgtcagc gacatgttgc cataatggtt tgccgtttaa ttcaagcaat cctttatcta
      721 cgccgcccat tcgtctggct ttaccgcccg ccagcacaac gcctgttatc gtcgtcatca
      781 gattcaccga tatcgcctct tttattgtgg gattgaccct gctaacgtgt ctgtctcaag
      841 agtaaggagc attactatga aatgtaaacg tctgaatgaa gttattgaac tcctccagcc
      901 agcctggcaa aaagagccag accttaacct gctgcaattt ttgcagaaac tggcgaaaga
      961 gtcaggtttt gacggcgaac tagcggattt gacggatgac attctgatct atcacctgaa
     1021 aatgcgtgat tccgcgaaag atgcggttat cccgggtttg caaaaagatt atgaagaaga
     1081 tttcaaaacg gcgctgttac gcgctcgcgg cgtaattaaa gagtaaaagc ttgtaagcgg
     1141 cgccaccaaa atcatcgtga aatgatatcc ttcatcattc gtaatgtttt ccggatgatg
     1201 ggatgaacaa cagcgctttt actttccaga cactacaccc ggataccatc atggatgctc
     1261 tatttgagca agggatccgg gtggattccg gtcttacccc gcttaacagc tatgaaaacc
     1321 gtgtctatca atttcaggac gaagatcgtc gacgttttgt cgtcaaattt tatcgccctg
     1381 aacgttggac agccgatcaa atcctcgaag aacatcaatt tgcgttgcag ctggttaacg
     1441 atgaagttcc ggtcgcagcg cctgtggcct ttaacggtca gactttattg aatcatcagg
     1501 gattttattt cgctgttttt ccaagcgtcg gtggtcgcca gttcgaagct gataatatcg
     1561 atcagatgga agcggttggg cgttatttag ggcgtatgca tcagacgggg cgcaaacagc
     1621 tttttatcca tcgcccgacc atcggtctga atgaatatct cattgagcct cgcaagctgt
     1681 ttgaggacgc tacactgata ccttccgggt tgaaagcggc attcctgaaa gcgacagatg
     1741 agctgatcgc cgccgttaca gcacactggc gggaagattt caccgttctg cggctacatg
     1801 gagactgcca cgccggtaat atcctctggc gcgatggtcc aatgtttgtt gatctggatg
     1861 atgcacgtaa tggtccagcc gttcaggatt tgtggatgtt gctcaatggc gataaagccg
     1921 agcagcggat gcaactggaa actattattg aagcttatga agaatttagc gagttcgaca
     1981 ccgctgaaat cggactgatt gaacctttac gcgccatgcg tttggtttat tatcttgcct
     2041 ggctaatgcg gcgttgggct gatcccgcgt tcccgaaaaa tttcccgtgg ttaaccgggg
     2101 aagattactg gctgcgacaa acggcgactt ttatagaaca ggcaaaagtt ctacaagaac
     2161 cccctttaca attaacacct atgtattaat cggagagagt agatcatgaa aaagatttgg
     2221 ctggcgctgg ctggtttagt tttagcgttt agcacatcgg cggcgcagta tgaagatggt
     2281 aaacagtaca ctaccctgga aaaaccggta gctggcgcgc cgcaagtgct ggagtttttc
     2341 tctttcttct gcccgcactg ctatcagttt gaagaagttc tgcatatttc tgataatgtg
     2401 aagaaaaaac tgccggaagg cgtgaagatg actaaatacc acgtcaactt catgggtggt
     2461 gacctaggca aagatctgac tcaggcatgg gctgtggcga tggcgctggg cgtggaagac
     2521 aaagtcactg ttccgctgtt tgaaggcgta cagaaaaccc agaccattcg ttcagcatct
     2581 gatatccgcg atgtatttat caacgcaggt attaaaggtg aagagtacga cgcggcctgg
     2641 aacagcttcg tggtgaaaac cctggtcgct cagcaggaaa aagctgcagc tgacgtgcaa
     2701 ttgcgtggtg ttccggcgat gtttgttaac ggtaaatatc agctgaatcc gcagggtatg
     2761 gataccagca atatggatgt ttttgttcag cagtatgctg atacagtgaa atatctgtcc
     2821 gagaaaaaat aattcaatgt aaattacata aagcccgtga atattcacgg gcttttttta
     2881 ttatttaata aatataaata cattctgata atgcatcctg ccgctggaca ttatttcagc
     2941 ataagtggat attcaaagtt ttgctgtttt atcagggaat atttatatga tacgtaagtc
     3001 agctacagat gttattgttg cgttagccat aatctggggt ggtggcacat agtacacagg
     3061 tacacaggta cacaaattca gcctggtgtc gaaaaattta ttaaagattt taacgatgct
     3121 aaaaagaaag gtgaacatgc ctacgatatg acgttaagtt atcaaaattt tgacaaaggc
     3181 ttttttaatt cccgttttca aatgcaaatg acattcgata acggtgcacc cgatctcaat
     3241 atcaagccag gccagaaagt tgtatttgat gtggatgttg agcacggtcc gttgcccatc
     3301 ataatgttac tgcatggtaa tgtcatccga gcactggcag cggcaaaagt gaacttagtg
     3361 aataatgaac tgacacaacc gctatttatc gccgcgaaaa ataaatcgcc cgtggaagcg
     3421 acattgcgat tcgcgtttgg tggctcattc tctacgacat tagatgttgc ccctgcagag
     3481 tatggaaagt tttcctttgg tgaaggccag tttactttta atggtgatgg tagttcattg
     3541 tctaacctgg atattgaagg caaagtcgaa gatattgttc tgcaattatc accgatgaac
     3601 aaagtaacgg cgaaaagttt taccattgat tctctgacgc gattagaaga aaagaaattt
     3661 ccggttggtg aaagcgagtc gaaatttaac cagattaata ttatcaatca gggggaagac
     3721 gtcgcccaaa tcgatgcttt cgttgcaaaa accaggctgg atcgcgttaa agacaaagat
     3781 tatatcaatg tcaatctgac ctacgaactt gataagttaa caaaagggaa tcagcaactc
     3841 ggtagtggtg agtggtcatt gattgctgaa tctattgatc cctcagcggt gcgccaattt
     3901 atcatccagt ataacattgc gatgcagaag cagcttgctg cacaccctga gttagcaaac
     3961 gatgaagttg ctctgcaaga agtgaatgct gcattgttca aagagtattt accgttatta
     4021 caaaaaagtg agccgaccat taaacaaccg gtaagatgga agaacgcact cggcgaacta
     4081 aatgccaatc tggatatcag tattgccgac ccagccaaat cttcatcatc cacaaacaaa
     4141 gatattaaat cgctcaattt tgatgtgaag ttaccgctta atgtcgtcac agaaaccgca
     4201 aaacagctta atttatctga aggaatggat gcggaaaaag cgcaaaagcg ggctgataaa
     4261 caaatcagcg ggatgatgac cttaggtcag atgtttcagt taatcacgat tgacaacaat
     4321 accgcctcgc tgcagctgcg ttatacaccg ggtaaagttg tttttaacgg acaggagatg
     4381 agcgaagaag aatttatgtc tcgtgccgga cgttttgttc attaaaatac tcactcgcct
     4441 ctgctcattc agaggcgagt aaaacttact tattctgacg ctgtgatgac atgagagacg
     4501 tcagaagccg gtctttttcc tgccacaatg agttcagcca ttgctgaaaa tggcgcttaa
     4561 agcttttgtc attgatgtag tcgccatgta actcatcggc aataggctgt aaatccacat
     4621 gtacgacaat ccgcgtcagt ttaccgctta acatatcgaa gaacggctga cggttattgt
     4681 ccggataaca cagcgtaaca ttaagcagtt tatcgaattg tttacccagt acatttagcg
     4741 ccatcgcaat gcctgccgcc tttggtggca acaagttttg aaaagtggag tgggtttgct
     4801 gatgtttttc ttgcgtgaaa cgggagcctt caacgaaatt gacaatggtg gtgggatgca
     4861 ggcgaaactt ttcacaagaa cgccgagtgg tttcaacatc tttaccacgt cgctccggat
     4921 gacgtaataa ataagcgcgg gaataacgct tcataaacgg catatccagc gcccagcacg
     4981 ccaggccaag aaatggcacc caggccagct gttgcttgag gaaatattta ttcatcggaa
     5041 tgtgcttacg aaacagcacg cacagtacga caatatctgc ccaactacgg tggttacaaa
     5101 taagcagata ccagttcttc ttacttaacc cttccagccc gtgaacttcc cattgcaggt
     5161 gtgggttcag atgcagtaat accgccagac cttcacacca gcaatacatc ataaaatcac
     5221 aaaaacgcga aacctttcgc caaatgactg gcacaggtag caatagtttt acaatcccgg
     5281 caatgatgat cgggacggaa caaaaaatag tgaccaaaat ggtcaatacg atactcagca
     5341 aaagggttat cgcagcgagt attctcgtca taatgaattt attcaaaagg ttagccatag
     5401 acagtgcgct aaagaagcgc aaggcgcaga ttttagcaga aaacgaccca aataacggat
     5461 gatccttaag gagaaaaata attcatatct atccacatta gaaaaaatcc cattatctca
     5521 attattaggg atggctttat ttttaagtac atgaaaaaca aagataaaca tcatgctgta
     5581 aaaagcatga taataaatta aaagcgatgt aaataattta tgcacaaagt tatccacatg
     5641 acgatttgcg agcgatccag aagatctaca aaagattttc acgaaaagcg gtgaaaaact
     5701 catgttttca tcctgtctgt ggcatccttt acccataatc tgataaacag gcacggacat
     5761 tatggttcag atcccccaaa atccacttat ccttgtagat ggttcatctt atctttatcg
     5821 cgcatatcac gcgtttcccc cgctgactaa cagcgcaggc gagccgaccg gtgcgatgta
     5881 tggtgtcctc aacatgctgc gcagtctgat catgcaatat aaaccgacgc atgcagcggt
     5941 ggtctttgac gccaagggaa aaacctttcg tgatgaactg tttgaacatt acaaatcaca
     6001 tcgtccgcca atgccggacg acctgcgagc acaaatcgaa cctctgcacg cgatggttaa
     6061 agcgatggga ctgccgctgc tggcggtttc tggcgtagaa gcggacgacg ttatcggtac
     6121 tctggcgcgc gaagccgaaa aagccgggcg tccggtgctg atcagcactg gcgataaaga
     6181 tatggcgcag ctggtgacgc caaatattac gcttatcaat accatgacga ataccatcct
     6241 cggaccggaa gaggtggtga ataagtacgg cgtgccgcca gaactgatca tcgatttcct
     6301 ggcgctgatg ggtgactcct ctgataacat tcctggcgta ccgggcgtcg gtgaaaaaac
     6361 cgcgcaggca ttgctgcaag gtcttggcgg cctggatacg ctgtatgccg agccagaaaa
     6421 aattgctggg ttgagcttcc gtggcgcgaa aacaatggca gcgaagctcg agcaaaacaa
     6481 agaagttgct tatctctcat accagctggc gacgattaaa accgacgttg aactggagct
     6541 gacctgtgaa caactggaag tgcagcaacc ggcagcggaa gagttgttgg ggctgttcaa
     6601 aaagtatgag ttcaaacgct ggactgctga tgtcgaagcg ggcaaatggt tacaggccaa
     6661 aggggcaaaa ccagccgcga agccgcagga aaccagtgtt gcagacgaag cgccagaagt
     6721 gacggcaacg gtgatttctt atgacaacta cgtcaccatc cttgatgaag aaacactgaa
     6781 agcgtggatt gcgaagctgg aaaaagcgcc ggtatttgca tttgataccg aaaccgacag
     6841 ccttgataac atctctgcta acctggtcgg gctttctttt gctatcgagc caggcgtagc
     6901 ggcatatatt ccggttgctc atgattatct tgatgcgccc gatcaaatct ctcgcgagcg
     6961 tgcacttgag ttgctaaaac cgctgctgga agatgaaaag gcgctgaagg tcgggcaaaa
     7021 cctgaaatac gaccgcggta ttctggcgaa ttacggcatt gagctgcgtg ggattgcgtt
     7081 tgataccatg ctggagtcct acattctcaa tagcgttgcc gggcgtcacg atatggacag
     7141 cctcgcggaa cgttggttga agcacaaaac catcactttt gaagagattg cgggtaaagg
     7201 caaaaatcaa ctgaccttta accagattgc cctcgaagag gccggacgtt acgccgccga
     7261 agatgcggat gtcaccttgc agttgcatct gaaaatgtgg ccagatctgc aaaaacacaa
     7321 agggccgttg aacgtcttcg agaatatcga aatgccgctg gtgccggtgc tttcacgcat
     7381 tgaacgtaac ggtgtgaaga tcgatccgaa agtgctgcac aatcattctg aagagctcac
     7441 ccttcgtctg gctgagctgg aaaagaaagc gcatgaaatt gcaggtgagg aatttaacct
     7501 ttcttccacc aagcagttac aaaccattct gtttgaaaaa cagggcatta aaccgctgaa
     7561 gaaaacgccg ggtggcgcgc cgtcaacgtc ggaagaggta ctggaagaac tggcgctgga
     7621 ctatccgttg ccaaaagtga ttctggagta tcgtggtctg gcgaagctga aatcgaccta
     7681 caccgacaag ctgccgctga tgatcaaccc gaaaaccggg cgtgtgcata cctcttatca
     7741 ccaggcagta actgcaacgg gacgtttatc gtcaaccgat cctaacctgc aaaacattcc
     7801 ggtgcgtaac gaagaaggtc gtcgtatccg ccaggcgttt attgcgccag aggattatgt
     7861 gattgtctca gcggactact cgcagattga actgcgcatt atggcgcatc tttcgcgtga
     7921 caaaggcttg ctgaccgcat tcgcggaagg aaaagatatc caccgggcaa cggcggcaga
     7981 agtgtttggt ttgccactgg aaaccgtcac cagcgagcaa cgccgtagcg cgaaagcgat
     8041 caactttggt ctgatttatg gcatgagtgc tttcggtctg gcgcggcaat tgaacattcc
     8101 acgtaaagaa gcgcagaagt acatggacct ttacttcgaa cgctaccctg gcgtgctgga
     8161 gtatatggaa cgcacccgtg ctcaggctaa agagcagggc tacgttgaaa cgctggacgg
     8221 acgccgtctg tatctgccgg atatcaaatc cagcaatggt gctcgtcgtg cagcggctga
     8281 acgtgcagct attaacgcgc caatgcaggg aaccgccgcc gacattatca aacgggcgat
     8341 gattgccgtt gatgcgtggt tacaggctga gcaaccgcgt gtacgtatga tcatgcaggt
     8401 acacgatgaa ctggtatttg aagtccataa agatgatgtc gatgccgtcg cgaagcagat
     8461 tcatcaactg atggaaaact gtacccgtct ggatgtgccg ttgctggtgg aagtggggag
     8521 tggcgaaaac tgggatcagg cgcactaaga ttcgcctgaa catgcccttt tttcgtaagt
     8581 aagcaacata agctgtcacg ttttgtgatg gctattagaa attcctatgc aacaactgaa
     8641 aaaaaattac aaaaagtgct ttctgaactg aacaaaaaag agtaaagtta gtcgcgtagg
     8701 gtacagaggt aagatgttct atctttcaga ccttttactt cacgtaatcg gatttggctg
     8761 aatattttag ccgccccagt cagtaatgac tggggcgttt tttattgggc aaaaggaaag
     8821 atccgtaatg cctgatgcgc catgtttatc aggccaacgg tagaattgta atctattgaa
     8881 tttacgggcc ggatacgcca catccggcac aagcattaag gcaagaaaat tattcgccgt
     8941 cctgcgtttc ttctacaggc tgcatctcgc taaaccaggt atccagtttc tgccgcagct
     9001 tgtccacgcc ttgtttcttc aacgaagaaa acgtttcaac ctgcacatca ccgttaaacg
     9061 ccagtacagc ttcacgcacc atattcaatt gcgctttacg tgcgccgctt gccagtttgt
     9121 ccgctttggt cagcaacacc agcacggcga tattgctgtc taccgcccac tcaatcatct
     9181 gctgatccaa atctttcagc ggatggcgaa tatccattag caccaccaga ccttgcaggc
     9241 tctgacgttt ttcgaggtat tcgccgagcg cgcgctgcca tttgcgcttc atctcttccg
     9301 ggacttccgc ataaccgtac ccaggcaagt caaccagacg cttgccgtca gccacttcaa
     9361 acaggttgat aagctgggtg cgccctgggg tttttgaggt acgagccagg cttttctggt
     9421 tagtcagcgt gttcagcgcg ctggatttac ctgcgttgga acggcctgca aaagccactt
     9481 caattccggt atcggaaggt aggtggcgaa tatcaggcgc actcatcaca aaatgcgtct
     9541 gttgataatt caaattagtc aaagcggtcg tctccgtcag tcaaagcttt gcggcgatta
     9601 tacctgaacc ataataaaag gcggattttt cggcgtgagc gttgtaagta aaagccatac
     9661 gctttgtgag acattgccga tagtctttat gcgaaatagc agagaaaatt ctgcgatgca
     9721 tgtcaaataa gctatataaa tcagtgaatt gcttttatat aaaactctga agatgtgcaa
     9781 atactgatgg cggttgattg tttgtttaaa gcaaaggcgt aaagtagcac ccatagagcg
     9841 aggacgctaa caggaacaat gactcaggat gagggtcagg agcgccagga ggcgaagaca
     9901 gaggattgtc aggaagacaa acgtccggag acgtaattaa acggaaatgg aatcaacacg
     9961 gattgttccg gctaatggaa aaacagggtg tgttggcggc ctgcaaggat tgtaagaccc
    10021 gttaagggtt atgagagtca ggaaaaaagg cgacagagta atctgtcgcc ttttttcttt
    10081 gcttgctttc tgttagattc cgccgcaaat ctatactgaa taaaacggct aaaagacgaa
    10141 ccattatgaa accatcatct tcaaactcac gcagcaaagg tcatgcaaaa gcgcgtcgaa
    10201 aaacacgcga ggagctggat caggaagctc gtgatcgcaa gcgtcagaaa aaacgtcgtg
    10261 gtcatgcgcc gggcagccgc gcagcgggcg gtaacaccac gtcaggcagc aaaggccaga
    10321 acgcaccaaa agatccacgt attggcagta aaacccctat tccattgggc gtgactgaaa
    10381 aagtcaccaa acagcacaaa ccgaagagtg agaaacctat gctttcaccg caggcggagt
    10441 tggagttact ggaaacggat gagcgtctgg atgcgctgct ggaacgtctg gaagcaggcg
    10501 aaaccctgag cgccgaagag caatcctggg tggatgctaa actggatcgt attgatgagt
    10561 tgatgcagaa actcggcctc tcttatgacg atgacgaaga agaggaagaa gacgagaagc
    10621 aagaagacat gatgcgtctg ctgcggggca actaacggat tgccgccgtg ggccttcccg
    10681 ttctgctgat aacccttccg gttatatgtt atctggtgtg gttattcgtt aaactacagc
    10741 ggttgtcgcg gcgacaaaag tggctgcgca accggctgac gacccgaaac gggcatccgc
    10801 cggtacgccg tagccgccag agacgccatc ggaaggagtg agcatgtctg tacagcaaat
    10861 cgactgggat ctggccctga tccagaaata taactattcc gggccacgat acacctcgta
    10921 cccgaccgcg ctggagtttt cagaagactt cggcgaacag gcgtttttac aagccgtggc
    10981 gcgctatcct gagcgtccat tatctctcta cgtacatatc ccgttctgcc ataagctttg
    11041 ttacttctgc ggctgcaata agattgttac tcgccagcag cacaaggccg atcagtatct
    11101 ggacgcgctg gagcaagaaa tcgtccatcg tgcaccgctg ttcgccggac gtcacgtcag
    11161 ccaattgcac tggggcggtg gaacgccgac gtatctgaat aaagcgcaaa tcagccgcct
    11221 gatgaagctg ctgcgcgaaa acttccagtt caatgccgat gcggagattt cgatcgaagt
    11281 cgatccgcgg gaaatcgaac tggatgtact cgatcattta cgcgccgagg gctttaatcg
    11341 cctgagcatg ggcgtgcagg acttcaacaa agaagtgcaa cgtctggtta accgcgagca
    11401 ggatgaagag ttcatctttg cactgcttaa ccatgcgcgt gagattggct ttacctccac
    11461 caacatcgac ctgatttacg gtctgccgaa acagacgccg gaaagttttg cctttaccct
    11521 gaaacgtgtg gcggagctga accccgatcg tctgagcgtc tttaactacg cgcatttgcc
    11581 gaccattttt gctgctcagc gcaaaatcaa agatgctgac ctaccgagtc cgcagcaaaa
    11641 actcgatatc ctgcaggaaa ccatcgcctt cctgacgcaa tcgggctatc agtttatcgg
    11701 tatggatcac tttgcccgtc ctgatgacga gctggcggtg gcccagcgtg aaggcgtgct
    11761 gcatcgtaac ttccagggct acaccactca gggcgatacc gatctgctgg ggatgggcgt
    11821 ttccgccatc agcatgattg gcgactgcta cgcgcagaac cagaaagagt tgaagcagta
    11881 ctatcagcaa gtggatgaac aaggcaatgc gctgtggcgt ggtattgcgc taacgcgtga
    11941 tgactgtatt cgccgcgatg tgattaagtc gctcatctgc aacttccgtc tggattacgc
    12001 ccctattgag aaacagtggg atttgcactt cgctgattac tttgcggaag atctcaagct
    12061 gctcgccccg ttagcaaaag atgggctggt ggatgtggat gagaagggaa tacaggtgac
    12121 ggcgaaaggt cgcttgctga tccgcaacat ttgcatgtgc tttgatacct atctgcgcca
    12181 gaaagcgcgg atgcagcagt tctctcgggt gatttaaata gtgaatggcg cttcgtttac
    12241 aaagtagaaa acgaaagcgc catcaatgtg ctgagaacaa gattgcctga tgcgctgggc
    12301 aacaaaacct gttgaaatta ttgcttttgt aggccggata aggcgtttac gccgcatcag
    12361 gcatctgagc atgatgcctg atgcgacgct ggtcgcgtct tatcaggcct acgactttct
    12421 ccgcatccgg cataaacaac gagcttcagc taaacagccc aatcatcgcg gcacacagca
    12481 cggcagcaac ggcagtttgc ggtgtgtggc tgtcaactgc gccactcgat accagattaa
    12541 ttattgattc cagcataatg actctccccg ttttccgggc aagatcatac tgaacttatc
    12601 ggaacagtaa agcgcaaaat accagcaatt tgcgctcaat aatcaatctt tacacacaag
    12661 ctgtgaatca ctccatcccc agctctttta acttacgcgt cagggtgttg cggccccagc
    12721 cgagtagccg cgccgcttcc tgtttatgcc cctgcgtatg tcgcaacgcg gtcgtcagta
    12781 acgtccgctc cagctctggc tgcgcttcgg aaagcagatt ttgatgaccg gaacgcagcg
    12841 ctctgtctgc ccactgcgca agaagcgtcg cccaactgtc cggttgcatt tgcgaagtac
    12901 tctccgcaac cgttgattca aacagttcgc cgggcaaatc ctgaatcaac acttcctgcc
    12961 cggcggccat caccgttagc cagcggcagg tgttttccag ctggcgcacg ttgcctggcc
    13021 acgccagacg cgtcagagca gcttcggttt ccggatgcag taacttcgct tctacgccca
    13081 gttcgcgcgc ggcaacctgt aaaaaatggc gcgccagacg gggaatatct tcccgacgtt
    13141 cgcgcagcgg cggcagatga acgcggataa cgttcaggcg gtggaacaga tcctcacgga
    13201 acttaccttc ctgcactcgc tgttcgagat tctggtgagt ggcagcgata atccgcacat
    13261 ccactttcac cggcgcatag ccgccaacgc ggtaaaactg accgtctgcc agcacgcgca
    13321 gcaaacgcgt ctgcacatcc agcggcatat cgccaatttc atcgagaaat aatgtaccgc
    13381 catcagcctg ttcaaaacgc ccctgacgaa tggtattcgc gccggtaaac gcgcctttct
    13441 cgtgaccaaa cagttctgat tcgatcaaat cttttgggat agctgccata ttcagcgcga
    13501 taaacggcgc tttggctcgc ggactgtggc gatgcagggc atgagcgacc agttctttac
    13561 cggtaccgga ttcgccgtta atcagcacgc taatagaaga acgcgaaagc cgaccgataa
    13621 tacggaacac gtcctgcatg gctggcgctt cgccgatgat atcggtcgtt gggccgttaa
    13681 gctgaacatt acgcggctgc tgctgttcct ggtaatgact gatggcgcgc tcaaccagcg
    13741 ccacggcttc gtcgatatca aacggtttgg gcagataatc gaacgcccct tgttgatagg
    13801 cgctgacggc agcatccaga tcggaatgtg cggtcataat gatgaccgga agcatcggat
    13861 ggcgctgttt aatctgcttg agtagcgcca gcccgtccat tcccggcata cggatatctg
    13921 aaagcagcac atccggcgtt ttgctcgcca gcgcctccag tacctccgcg ccgttctcaa
    13981 atgtcgtaca ggttaaaccc gctccagcga gcgcacgttc aagcacccaa cggatggaac
    14041 tatcgtcatc gactacccag actatccctc gttgcataaa cgtcaccttt atttcctgat
    14101 aggcaggtaa accgagaact cggtatgacc tggccaactg gtaaattcaa ttttgcctga
    14161 atgctgatca atcaaattac gggcgatgga taagccaagc ccggtgccac cttcgcggcc
    14221 gctgaccatc gggtaaaaca gcgtatcctg caaatgaggc ggaatgcccg gcccgttatc
    14281 ttccacatca atccgcgccg ccagccggta gcgctcgccg tgtaaggtca gttgaaacgc
    14341 ggtgcgggta cgcagaatga tttcaccgcc ttccggcccc agcgcctgta gcgcattgcg
    14401 cacaatattc agcaagacct gttcaatttg atccgggtcg tgcgccagtt ccggcaggct
    14461 gggatcgtaa tcacgaatca accgcacgtt gtccggcagt tccatcgaca ccagcgttac
    14521 cacgcgttca gccactttgt gaatactttc ggtaacgcgc gtaccgggca gctgcggccc
    14581 caacagacgg tcgaccaaat ttcgcagccg gtccgcctgt tcgataatca ctttggtata
    14641 ttcgagtagt gatgggtcag gtaacgcttt gctgagtaac tgcgccgcgc cacgtaaacc
    14701 gccaagcgga tttttaatct catgtgccag gccgcgcact aaatcacggg cagctacttg
    14761 ttgagcatgt tgtagttgtt cctggcttaa gcggcgctgg ttatccatcg gtgccatctc
    14821 cagcaggatc atgccgtccg gcatacgctg ggccgtcaca gaaaggatat gcgagcgccc
    14881 gtcgatcacc agcgtcactt cgttatcggt aaagccttgc cccgcctcca gactttcttg
    14941 catcagctcg atatttaatg agaagtagct caacagttcc ggtaacggcg taccaaacaa
    15001 tttgcgggag ctttgggcga gcagttgttg cgcggcgggg ttggcgtaat ggatcgccag
    15061 gttgtcattg attaacaaaa tactgttaat cagcgagttg aggatctgcc cagcatcggg
    15121 ctgcgtgcct gttgccataa agcagtctcc tgaacaggtt gcaccatttt agtgcattat
    15181 agctttttac ggataaaaag cgcgaagtat cagagaattg acggagaaaa agcgcgaagt
    15241 atcagagaat tgacggagaa aaaagcccat gcagagatgg gctgaaagtt tccacggcaa
    15301 ctaaatcccg gcgttgttgc gccgggtagt acaacttcaa ctattagacg ctgtagtaca
    15361 gctcaaactc taccggatgc ggagtcatac gcacgcggtc atcttcttcg cgacgcagag
    15421 cgatgtacgc atcgatcgct tcatccgtga acacgccacc ggctttcagg aactcgcggt
    15481 ccagatccag ctcgttcagt gcttcttcca gagagcctgc aacttgtggg atctctttcg
    15541 cttcttctgg cggcaggtca tacaggtttt tgtccatggc ttcgcccgga tggatcttgt
    15601 tcttgatacc atcaagaccg gccatcagca gggcagcaaa gcacaggtac gggttagccg
    15661 ccggatccgg gaaacgtact tcgatacgac gtgctttcgg agaagaaacc accggaatac
    15721 ggatagacgc agaacggttg cgtgcagagt aagccagcat taccggtgct tcgtagcccg
    15781 ggaccagacg cttataagag ttggtggtcg ggtttgccag ggcgttaatc gctttagcgt
    15841 gtttgattac gccgccaatg tagtacagcg cctgctcaga cagacctgcg tatttgtcgc
    15901 ctgcgaacag gttaacgccg tttttagaca gcgacatgtg gcagtgcata ccggagccgt
    15961 tatcaccgaa catcggtttt ggcataaagg tcgcggtttt accgaagcgg tgcgctacgt
    16021 tgtgcacaac atatttgtag atctgaattt cgtcagcttt tttggtcatg gtattgaagc
    16081 gggtagccac ttcgttctga ccagcagtcg ctacttcgtg gtgatgggct tcaaccacca
    16141 gacccatctg ttccatcacc agacacattt cagaacgaat atcctgagcc gagtctaccg
    16201 gtggaaccgg gaagtaaccg cctttcactg ccggacggtg acctttgtta ccaccttcgt
    16261 attgggtgga ggagttccat gtgccttcga tatcgtcgat agcaacgtgg gaaccggaga
    16321 tagatgatcc gaaacggatg tcatcgaaca ggaagaattc aggttctggc ccgaacagta
    16381 cggtgtcggc aatgccagtg gaacgcaggt aatcttcggc gcgcttcgca atagagcgcg
    16441 ggtcacggtc atagccttgc agggtgccag gttcaaggat gtcgcaacgg ataatcaggg
    16501 tggagtcggc gaagaacggg tcaatcactg cggtggatgc gtctggcatc agcaccatgt
    16561 cggattcgtt aatgcctttc cagccgccaa tcgaggagcc gtcaaacatt ttgccttctt
    16621 cgaagaattc agcattcacc tgatgagcag ggatagtgac gtgctgttct ttacctttgg
    16681 tatcggtgaa gcgcaaatca acaaacttca cttcgtgctc gttcagcatc gtcagtacgt
    16741 gttcagcgga catactttaa ctctcctgga ttggtcattg tcgtcgtggt aacgaaatct
    16801 gcaattattt tggccgtgtc gccgtaaaaa agataaagcg aaatctgtgc caacttttaa
    16861 attgccccta aaaggcgtta tcatgcttaa catcgtgcaa aagggctgca ccatgatgtg
    16921 aatgttgcac caatatagtg cgtcaatgga aacattaagc accatattgg tgcaatgacc
    16981 tttggataac cctttttatg ctccgtgaaa gcgatcacaa agggactctg caatacttgt
    17041 ttgcggagga tgtttgtgat cctgttttgt agtgcgatta atccgtgtac aataacgcgc
    17101 tatttctaat gcctgaggca aagttgtgat cgaaaaattg cgtaatatcg ccatcatcgc
    17161 gcacgtagac catggtaaaa ccaccctggt agacaagctg ctccaacaat ccggtacgtt
    17221 cgattctcgt gccgaaaccc aagagcgcgt gatggactcc aacgatttgg agaaagagcg
    17281 tgggattacc atcctcgcga aaaacaccgc tatcaaatgg aatgattacc gtatcaacat
    17341 cgttgatacc ccggggcacg ccgacttcgg tggtgaagtt gaacgtgtaa tgtccatggt
    17401 agactcagtg ctgctggtgg ttgacgcatt tgacggcccg atgccgcaaa cgcgcttcgt
    17461 aaccaaaaaa gcgtttgctt acggcctgaa gccgattgtt gttatcaaca aagttgaccg
    17521 ccctggcgcg cgtcctgact gggttgtgga tcaggtattc gatctgttcg ttaacctcga
    17581 cgcgaccgac gagcagctgg acttcccgat cgtttatgct tctgcgctga acggtatcgc
    17641 gggtctggac cacgaagata tggcggaaga catgaccccg ctgtaccagg cgattgttga
    17701 ccacgttcct gcgccggacg ttgaccttga cggtccgttc cagatgcaga tttctcagct
    17761 cgattacaac agctatgttg gcgttatcgg cattggccgc atcaagcgcg gtaaagtgaa
    17821 gccgaaccag caggtcacta tcatcgatag cgaaggcaaa acccgcaacg cgaaagtcgg
    17881 taaagtgctg ggccacctcg gtctggaacg tatcgaaacc gatctggcgg aagctggcga
    17941 tatcgttgcg atcacgggcc ttggcgaact gaacatttct gacaccgttt gcgacacgca
    18001 aaacgttgaa gcgctgccgg cactctccgt tgatgagccg accgtttcta tgttcttctg
    18061 cgttaacacc tcgccgttct gcggtaaaga aggtaagttc gtaacgtctc gtcagatcct
    18121 ggatcgtctg aacaaagaac tggtacacaa cgttgcgctg cgcgtagaag aaaccgaaga
    18181 cgctgatgcg ttccgcgttt ctggtcgtgg cgaactacac ctgtctgttc tgatcgaaaa
    18241 catgcgtcgt gaaggtttcg aactggcggt atcccgtccg aaagttatct tccgtgaaat
    18301 cgacggtcgt aaacaagagc cgtatgaaaa cgtgacgctg gacgttgaag aacagcatca
    18361 gggttctgta atgcaggcgc tgggtgaacg taaaggcgac ctgaaaaaca tgaatccaga
    18421 cggtaaaggc cgcgtacgtc tcgactacgt gatcccaagc cgtggtctga ttggcttccg
    18481 ttctgagttc atgaccatga cttccggtac tggtctgctg tactccacct tcagccacta
    18541 cgacgacgta cgtccgggcg aagtgggtca gcgtcagaac ggtgtactga tctctaacgg
    18601 tcagggtaaa gcggtcgcgt tcgcgctgtt cggtctgcag gatcgcggta agctgttcct
    18661 cggtcacggt gcagaagttt acgaaggtca gattatcggt attcatagcc gctctaacga
    18721 cctgactgta aactgcctga ccggtaagaa actgaccaac atgcgtgctt ccggtactga
    18781 cgaagccgtt gttttggttc cgcctatccg catgactctg gaacaagctc tggagttcat
    18841 cgatgatgac gaactggtag aagtgactcc gacctctatc cgtattcgta aacgtcacct
    18901 gacggaaaac gatcgtcgtc gcgctaaccg cgcaccgaaa gacgattaat ttcgtttttt
    18961 agttataaaa aacctgccat cgct
//
LOCUS       DAJVTL010000087        18817 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.088, whole genome shotgun sequence.
ACCESSION   DAJVTL010000087 DAJVTL010000000
VERSION     DAJVTL010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18817
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.088"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..363
                     /gene="psuG"
                     /locus_tag="OQQ26_002871"
     CDS             <1..363
                     /gene="psuG"
                     /locus_tag="OQQ26_002871"
                     /EC_number="4.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HCS1858263.1"
                     /translation="LPAFFCRTSPFDVSIRLDSASEIARAMAVKWQTGLNGGLVVANP
                     IPEQFAMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVF
                     NNAILASEIAKEYQRLAG"
     gene            457..1629
                     /locus_tag="OQQ26_002872"
     CDS             457..1629
                     /locus_tag="OQQ26_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HCS1858264.1"
                     /translation="MDIMRSVVGMVVLLAIAFVLSVNKKSISLRTVGAALLLQIAIGG
                     IMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVL
                     PAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFAR
                     ILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIDGIGGWFGFTNASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAIISFAL
                     CGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA"
     gene            complement(1700..2395)
                     /gene="yeiL"
                     /locus_tag="OQQ26_002873"
     CDS             complement(1700..2395)
                     /gene="yeiL"
                     /locus_tag="OQQ26_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator YeiL"
                     /protein_id="HCS1858265.1"
                     /translation="MKEIHNNDLKQQLMSESAFKDCFLDVSADTRLFHFLARDYIVQE
                     GQQPSWLFYLTRGRTRLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEE
                     CWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILL
                     SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL
                     EMDPENKFSGMMQ"
     gene            2525..3466
                     /gene="rihB"
                     /locus_tag="OQQ26_002874"
     CDS             2525..3466
                     /gene="rihB"
                     /locus_tag="OQQ26_002874"
                     /EC_number="3.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosylpyrimidine nucleosidase"
                     /protein_id="HCS1858266.1"
                     /translation="MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLD
                     KTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAEST
                     HAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT
                     PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGEMFSD
                     IMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCD
                     ELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH"
     gene            3566..4816
                     /locus_tag="OQQ26_002875"
     CDS             3566..4816
                     /locus_tag="OQQ26_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HCS1858267.1"
                     /translation="MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGG
                     IMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDKLFDGAGFIFGFRVL
                     PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
                     LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGVGSWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGKKLAINEFVA
                     YLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVASHRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
     gene            complement(4872..5960)
                     /locus_tag="OQQ26_002876"
     CDS             complement(4872..5960)
                     /locus_tag="OQQ26_002876"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1858268.1"
                     /translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK
                     GRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQAASHPGTIHCSAGGVGRNIAHN
                     LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSDCVRLHGQSTSTYLAIANRDDQT
                     VLAINDTHLLEQLTPQLLNGSRDLLCHAGVVLADCNLTAEALEWVFTLADEIPVFVDT
                     VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNAAVNALHQQGVQQLFVY
                     LPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGNNFRDSARFAMA
                     CAAISRASGSLNNPTLSADNALSLVPMV"
     gene            complement(5963..6820)
                     /gene="nfo"
                     /locus_tag="OQQ26_002877"
     CDS             complement(5963..6820)
                     /gene="nfo"
                     /locus_tag="OQQ26_002877"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HCS1858269.1"
                     /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
                     TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
                     LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
                     DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETITPDIWAEEIAWLK
                     AQQTEKAVA"
     gene            complement(6894..7943)
                     /locus_tag="OQQ26_002878"
     CDS             complement(6894..7943)
                     /locus_tag="OQQ26_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HCS1858270.1"
                     /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
                     SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
                     SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTVAIFLNPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
                     SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAI
                     FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
                     VGGGAINYVIQSVIA"
     gene            8042..8923
                     /locus_tag="OQQ26_002879"
                     /pseudo
     CDS             8042..8923
                     /locus_tag="OQQ26_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311076.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            9128..10597
                     /gene="lysP"
                     /locus_tag="OQQ26_002880"
     CDS             9128..10597
                     /gene="lysP"
                     /locus_tag="OQQ26_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HCS1858271.1"
                     /translation="MGSETKTTEAPGLHRELKARHLTMIAIGGSIGTGLFVASGATIS
                     QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
                     LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGLAAMIGVAMIVGFSF
                     QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
     gene            10803..12242
                     /gene="cirA"
                     /locus_tag="OQQ26_002881"
     CDS             10803..12242
                     /gene="cirA"
                     /locus_tag="OQQ26_002881"
                     /inference="COORDINATES: protein motif:HMM:NF007478.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
                     /protein_id="HCS1858272.1"
                     /translation="MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNL
                     KDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLIL
                     VDGKRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKI
                     GQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNS
                     TTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQN
                     YSVSHNGRWDYGTSELKYYGEKVENKNLGNSSPITSESNTVDGKYTLPLTAINQFLTV
                     GGEWRHDKLSDAVNLAGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGE
                     HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPA
                     KVGSWGFTTWVKKAGWKGLNPALPFSVTM"
     gene            12179..12775
                     /locus_tag="OQQ26_002882"
     CDS             12179..12775
                     /locus_tag="OQQ26_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HCS1858273.1"
                     /translation="MGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVG
                     FTANGVPVFSYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDVSNGENKPLSD
                     LPFHTANGTLDWKPRALEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVTK
                     DVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF"
     gene            complement(12807..13643)
                     /gene="yeiG"
                     /locus_tag="OQQ26_002883"
     CDS             complement(12807..13643)
                     /gene="yeiG"
                     /locus_tag="OQQ26_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HCS1858274.1"
                     /translation="MGMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP
                     VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVANDDGYDLGQGAGF
                     YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSVSAFAPIVNPCSVPWGIKAYSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLID
                     QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL
                     LK"
     gene            13901..14569
                     /gene="folE"
                     /locus_tag="OQQ26_002884"
     CDS             13901..14569
                     /gene="folE"
                     /locus_tag="OQQ26_002884"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HCS1858275.1"
                     /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
                     TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
                     RHHN"
     gene            14586..15743
                     /locus_tag="OQQ26_002885"
     CDS             14586..15743
                     /locus_tag="OQQ26_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
                     /protein_id="HCS1858276.1"
                     /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITP
                     QDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF
                     WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISVSQTSRA
                     WTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRS
                     GWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPF
                     QAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTMLFYHLGLFMHFDR
                     LELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR"
     gene            15885..16924
                     /gene="galS"
                     /locus_tag="OQQ26_002886"
                     /pseudo
     CDS             15885..16924
                     /gene="galS"
                     /locus_tag="OQQ26_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708050.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
     gene            17204..18202
                     /gene="mglB"
                     /locus_tag="OQQ26_002887"
     CDS             17204..18202
                     /gene="mglB"
                     /locus_tag="OQQ26_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HCS1858277.1"
                     /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
                     KAIEQDAKAAPDIQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
                     DGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
                     VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
     gene            18263..>18817
                     /locus_tag="OQQ26_002888"
     CDS             18263..>18817
                     /locus_tag="OQQ26_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020883197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCS1858278.1"
                     /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
                     MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ
                     RSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
                     AKAFSYNAKIVIMDEPTSSLTEKEV"
BASE COUNT         4501 a         4579 c         5009 g         4728 t
ORIGIN      
        1 ctgcctgcgt ttttctgccg taccagcccg tttgacgtca gcattcgtct cgacagcgcc
       61 agtgaaattg ctcgcgcgat ggcagtgaag tggcaaaccg gtttgaacgg cggcctggtg
      121 gtagcgaacc cgatcccgga acagtttgcg atgccagaag aaaccatcaa tgcagcaatt
      181 gatcaagccg ttgctgaagc cgaagaacag ggtgttattg ggaaagagag tacaccgttc
      241 ctgctggcgc gtgttgcgga gctaaccggc ggtgatagcc tgaaatccaa tattcaactg
      301 gtctttaata acgccattct ggcgagtgaa attgccaaag aataccagcg tctcgcgggt
      361 taatttctga cgggcagaaa gccgtcgccc gtactgatca tacataccga aacctggcgc
      421 tgacgccggg tttactggca tgaagggaaa atcattatgg atataatgag aagtgttgtg
      481 gggatggtgg tgttactggc aatagcattt gtgttgtcgg taaataaaaa aagtatcagt
      541 ttacgcacgg ttggggccgc gctgctgctg caaatcgcta ttggtggcat catgctctat
      601 tttccgccgg gaaaatgggc agtagaacag gcggcattag gcgttcataa agttatgtct
      661 tatagtgatg ctggtagcgc cttcattttt ggttcgctgg ttgggccgaa aatggatgtc
      721 ctgtttgacg gtgcgggttt tatcttcgcc tttcgcgtac ttccggcgat tattttcgtc
      781 actgcgctca ttagtctgct gtactacatt ggcgtgatgg ggctgctgat tcgcatcctt
      841 ggcagcattt tccagaaagc cctcaacatc agcaaaatcg aatcttttgt tgcggttacc
      901 actattttcc tcgggcaaaa tgagatcccg gcgatcgtta aaccgtttat cgatcgcatg
      961 aatcgcaacg agttgtttac cgcaatttgt agcgggatgg cgtccattgc gggttcgatg
     1021 atgattggtt atgccggaat gggcgtacca attgactacc tgttggcggc atcgctgatg
     1081 gcgatccccg gcggtatttt gtttgcacgt attcttagtc cggcaactga gccttcgcag
     1141 gtcacatttg aaaatctgtc gttcagtgaa acgccgccaa aaagctttat cgaagcggcg
     1201 gcgagcggtg cgatgaccgg gttgaaaatc gccgccggtg tggcgacggt ggtaatggcg
     1261 tttgtcgcaa ttattgcgct gattaatggc attatcgacg gaattggcgg ctggtttggt
     1321 tttaccaatg cttctctgga aagtattttt ggctatgtgc tggcaccgct ggcgtggatc
     1381 atgggtgtgg actggagtga tgccaacctt gcgggtagcc tgattgggca gaaactggcg
     1441 attatatcct ttgcgctttg tggttttgct aactttggtt ctatcggtgt tgtcgttggc
     1501 gcattttcgg ctatttcgcc aaaacgtgct ccagaaatcg cccagcttgg tttacgggcg
     1561 ctggcagcag caacgctttc caacctgatg agtgcgacta ttgccgggtt ctttattggt
     1621 ctggcgtaat gctcgatttg tagaccggat aaaacgtatt aagcgttgca tccggcaatc
     1681 gcgctattgc caataatttt tactgcatca tcccggagaa tttattctcc gggtccatct
     1741 ccagcgccag tcctgacaac tgctttctgt ttttaattag ataccctttc ttgcttttaa
     1801 ttaataaacc gtcgtgaatg aattgcgcga gaacatataa aagatgtcga taagaaacgc
     1861 ctaaatactc tgccgcttgc gtatgctttt cgtgataaag atcaccttcc tgcgagagta
     1921 atataaatgc tgccaggcga ttcactaacg gaaatgattg attctgagtt aaagaaacaa
     1981 tattacgata atttttatga cttaaggtga cgcagagttt tcgtaaaaat agcgtgtcgt
     2041 ttaataacag cgggcggtaa tgtttcatag ggagcgcaag gcaccaacac tcttcaatag
     2101 cctgcaccgc tcgcggttca tggtctttgt cgattaactc aatctcgcca ataaaacagg
     2161 gggcggcaaa gaaatcgatc agcgacacgc gaccattagc tagcgtggcg taaagcctgg
     2221 tgcggcctcg cgtcaggtaa aacagccagg acggctgttg cccttcctgc acaatgtagt
     2281 cacgcgctaa aaaatgaaac agccgcgtat cggctgaaac atccaaaaag caatccttaa
     2341 acgcggattc actcatcaat tgctgcttaa gatcattatt gtggatttct ttcacgatgt
     2401 ttatccgcta tgagatttct catatttagc atacgtacgc tgttgttaag attcaataat
     2461 cggcccgatc gaaatttctt tgctgtagaa aaaataacgc aactggaaac agaggaaata
     2521 aacagtggaa aagagaaaaa ttattctgga ttgtgatccg ggtcatgatg atgctattgc
     2581 tataatgatg gcggcgaaac atccggcgat tgatttatta ggtatcacca ttgttgcggg
     2641 taatcagacg cttgataaaa cattaattaa tggcctgaat gtttgccaga aactggagat
     2701 taatgttccg gtttatgcgg ggatgccgca acccattatg cgtcaacaaa tcgttgccga
     2761 taatattcac ggtgaaaccg gactggatgg cccggtattc gagccgctga cccgccaggc
     2821 agaaagtacc cacgcggtga aatacatcat tgataccctg atggcaagcg atggcgatat
     2881 cactctggtg ccggttggtc cgttgtcaaa tatcgcggtg gcaatgcgta tgcaacccgc
     2941 gatcctgccc aaaatccgtg aaattgtgct aatgggcggc gcttacggta caggcaactt
     3001 cacgccatct gccgagttca acatctttgc tgacccggaa gccgcacgcg tggtgttcac
     3061 ctccggcgtt ccattagtga tgatgggcct cgatcttacc aaccagaccg tttgcacccc
     3121 ggacgtaatt gcacgaatgg aaagggcagg cggccctgcc ggagagatgt tcagcgacat
     3181 catgaacttc actctcaaaa cgcagttcga aaactacggc ctggctggcg gcccggtgca
     3241 cgacgccacc tgcatcggtt atctgattaa ccctgatggc attaaaaccc aggagatgta
     3301 cgtcgaagtg gacgtcaaca gtggcccttg ctatgggcgt accgtctgcg acgagctggg
     3361 cgttcttggc aagcccgcta ataccaaagt cggcatcact attgataccg actggttctg
     3421 gggcttagtc gaagagtgcg tgcgcggcta catcaaaacc cattaagtgt tgataacaag
     3481 ccgggtcagt atcgcaagat gcaggcccgg ctatttctga ggggcagaaa gccgtcgccc
     3541 aatatgacat gaagagataa taactatgga tgtcatgaga agtgttctgg gaatggtggt
     3601 attgctgacg attgcgtttt tactgtcagt aaacaagaag aagatcagcc tgcgtaccgt
     3661 tggcgcggcg ttagtgttac aggttgtgat tggcgggatt atgctttggt taccgccagg
     3721 gcgttgggtc gctgaaaaag tcgcttttgg cgtgcataaa gtgatggcgt acagcgacgc
     3781 gggtagcgca tttatcttcg gttcgctggt cgggccgaaa atggacaagc tgtttgatgg
     3841 cgcaggattt atctttggtt tcagagtatt accggcaatt atcttcgtta cagcactggt
     3901 gagtattctc tactacatcg gtgtgatggg gattttaatt cgcattctcg gcggtatctt
     3961 ccagaaagcg ttaaatatca gcaagatcga gtcattcgtc gcggtcacta ccattttcct
     4021 cgggcaaaac gaaattccgg caatcgtcaa accctttatc gatcggctga atcgcaatga
     4081 attatttaca gcgatttgta gtggcatggc ctcgattgct ggttcgacaa tgattggtta
     4141 cgccgcactg ggcgtgcctg tggaatatct gctggcggca tcgttaatgg cgatccctgg
     4201 cgggatcttg tttgcccgcc tgctaagccc ggcaacggaa tcttcgcagg tttcctttaa
     4261 taacctctct ttcaccgaaa caccgccaaa aagcattatt gaagccgctg cgacaggggc
     4321 aatgaccggg ctgaaaatcg ccgccggtgt agcgacagta gtgatggcat ttgtcgccat
     4381 cattgcgtta attaacggta ttatcggcgg cgttggcagc tggtttggtt ttgaacatgc
     4441 ctcgctggag tccattttag gttacctgct ggccccactg gcgtgggtga tgggtgttga
     4501 ctggagtgat gcgaatcttg ccgggagttt gattggaaag aaactggcaa taaatgaatt
     4561 tgtcgcttac ctcaatttct caccctatct gcaaacggct ggcactctgg atgctaaaac
     4621 cgtggcgatt atttccttcg cgttgtgtgg tttcgctaac tttggttcta tcggggtggt
     4681 ggtgggggcg ttttctgcgg ttgcgtcaca ccgtgcgccg gaaatcgccc agcttggttt
     4741 acgcgcgctg gcggcggcga cactttctaa tctgatgagt gccaccattg ccgggttctt
     4801 tattggttta gcgtagtgtg caatttatga gccggattag atgcggtcaa gcgtcgaatc
     4861 cggcaacatt gttacaccat tggcactaat gacagcgcgt tatcggcaga cagggtaggg
     4921 ttgtttaagc tgccgctggc gcgtgaaatt gccgcgcagg ccatcgcaaa acgggcgctg
     4981 tcacggaaat tgtttccctc cagaaagcta tataccagac ccgccataaa accatcgtca
     5041 gcaccaaaac tgtctaccgt cgtatgcgct ggtgcagtca gcaaaaattg ttcaccatcc
     5101 ttttcgctgc aataaactga ctcatcgggc aaataaacaa acagttgctg aacaccttgc
     5161 tgatgcaatg cattcactgc ggcattacgg tcagcatcgc tggtgatcgc ctgtccccat
     5221 aaaatttcca gctccggtaa agtgggtttc agggtgtgaa tatgcgccag ccagtgtttg
     5281 attttgcccg ctttgaattc tgaaacggta tcgacaaaca ccgggatttc atcagcgagg
     5341 gtaaagaccc attccagcgc ctcggctgtc aggttgcaat cagccagtac cacgcccgca
     5401 tgacaaagta aatcgcgcga cccgttcagt agttgcggtg tcaactgttc cagcagatgg
     5461 gtatcgttaa tcgccaacac ggtttgatcg tctcgattgg caattgccag atacgtcgat
     5521 gtgctttgac catgcaaacg aacgcagtcg gagacattca cgccggcacg gcgcgtttct
     5581 tccaggagca tttcgccata aaagtcatcg ccaatcactg aaagcaaatg gacgtcgcgg
     5641 cctaacagcg ccagattgtg ggcgatattg cgtccaacgc cgcctgccga gcaatgaatt
     5701 gtaccgggat gagaagccgc ttgtgggtaa cggatatccg ccatcccgcg aatatccata
     5761 ttgattgtcc ccaccactac gcagtattcc tgctcggtga gaatgtaacc tttgccttta
     5821 atccgccctt tgcgcattaa atccataata tgcgccgcaa cgcgcgaacg actgatttgc
     5881 agcatgtccg caatttcgtt ctgctgaatc agcgggttac gccgtaaaat tgcaaggatc
     5941 tccttttccc ggttattcat cttcaggcta ccgctttttc agtttgttgc gctttcagcc
     6001 aggcgatctc ttctgcccag atatccgggg tgatggtttc aaggatcagc ggaatgccgt
     6061 cgaaacggtc gtcctgcatg atccagcgga acgcatcatg accgatattg ccttcaccga
     6121 ggctatgatg gcggtcaacg cggctgccaa aggtgctttt cgcatcgtta aggtgcatcc
     6181 cgcgcagata cttaaagcca acaatacggg caaaatccgc gaacgttttc tcgcattcgg
     6241 ctggagtacg caaatcatac ccggcagcga aagcatggca ggtatcaatg cagacgccga
     6301 cacgggattt atcttccacg ccgtcgataa tcgccgcgag atgttcgaat ttaaacccta
     6361 agttactgcc ctgaccggcg gtattttcaa tcaccgctgt tacaccttga gttttatcca
     6421 gcgcaatgtt gatggattcg gcaatacgcg caaggcaatc ctcttctgaa atctgcatca
     6481 gatggctgcc agggtggaag ttgagcaaag aaagccccag ttgttcgcaa cgctgcattt
     6541 catctataaa ggcatcgcgc gatttttcca gagcttcagt gaccggatgt ccgaggttaa
     6601 tcagataact gtcgtgggga agaatttgcg ccgatgtgta gtgatatttt tcacaggcgg
     6661 ctttgaattc atcgatggtt tgcgtcgtga gcggtgcggc acgccactga cgttggtttt
     6721 tggtgaacaa ggcaaacgcg gttgcgtcga tttcggcggc gcgaattgcg gcatttgcca
     6781 gaccgccagc agcactaacg tgcgctccaa tgtatttcat gcgaggactc ctgttaaacc
     6841 cgctggagga aaacggtaat gatagcgggt taacaggagc aagatgtagt ggtttatgcg
     6901 atgacgcttt gaatcacata gttaatcgca ccaccaccaa caatcagcca ggcaaacagt
     6961 accagtgcca tcagcagagg tttcgccccg gcttttttca gcgcgctgac gtgagtggtc
     7021 agacccagcg ccgccatcgc cattgccagc aggaaggtat ccagcgttac cagcatgttc
     7081 accacgctct gcggtaacag gtggaacgag ttaaagatgg caactacgat gaacaagatg
     7141 gcaaaccacg gaatagtgat tttgcttttc tcgccgctgt tcgccccaga cagctgttta
     7201 acacgcgccg ccagcaggat gaggaacgga gccagcatca tcacgcgcag cattttggaa
     7261 ataactgctg cgttttccgc atccgggctg atggcatgac ctgccgccac cacctgcgcc
     7321 acttcgtgca cagtagaacc aatgtagata ccgaaagttt ccggactaaa ccattgagac
     7381 atcagcggat atatcgccgg gttgaggaaa atcgcgacgg tcccgaagat aacaacggtt
     7441 gcaacagcca cggttacttt actggcttcc gctttcacta ccggctcagt cgccagtacc
     7501 gcggcagcac cacagatact gctaccggca ccgatcaacc agctggtgtg cttatccaga
     7561 ccaaacactt tctgccccag gaagcaagcc agcaggaagg tactggacag cgtcaacacg
     7621 tcaatgatga tcccactgat accgacatcg gcaatttgcg agaacgtcag acggaagcca
     7681 taaagaatga tacccagacg taataaatat tgcttggcaa acagcacacc accgtcacag
     7741 cttttccaga tgtgcggata gatggtgttg cctaaaacca tccccaacaa gattgcgagg
     7801 gtgagggcac taaacccggc acccgcaacc gcgggaatgg aaccacccca cagggcgacc
     7861 ccggtgataa ctgcactcag ggctaacccc ggaataaaat gccacagtgt acgatgttgt
     7921 ttctgtaagg tgatattcgt cataaccctc tcctttaacc gggcataagg ttacgactaa
     7981 ctggtttaaa aataaaattg attatatatt tataattaat ctttataagt ggtaagcgac
     8041 tatgcacatc accctccggc agttggaagt ttttgcagaa gtattgaaaa gtggatcaac
     8101 cacccaggcg tcggtgatgc tggcgttgtc gcaatcagca gtgagcgcag ccttgaccga
     8161 cctggaaggg cagcttggcg tgcaactgtt tgatcgcgtg gggaaaagac tggttgttaa
     8221 tgaacacggg cggctgctct atccgcgtgc gttggcattg cttgaacagg cggttgaaat
     8281 cgaacaactg tttcgcgaag acaacggcgc gattcgtatc tatgccagta gtaccatcgg
     8341 taactacatt ctgcctgcag ttatcgcccg ttatcgccat gattatccgc agttgccgat
     8401 tgaacttagc gttgggaata gctaggacgt gatgcaagcg gtgctggatt tccgcgttga
     8461 tattggcttt attgaaggac cgtgccacag cactgaaatc atttctgaac cgtggctgga
     8521 agacgagctg gtggttttcg ccgcgccgac ttcgccgttg gctcgtggtc cggtcacctt
     8581 agaacagctg gccgctgcgc cgtggatcct gcgtgaacgc ggttccggca cgcgggagat
     8641 tgtcgattat ctgttgctgt cacatttacc gaagtttgag atggcgatgg aattaggtaa
     8701 ctccgaggca atcaaacatg cggtgcgtca tgggttggga attagttgcc tgtcgcgacg
     8761 ggtgattgaa gatcaattgc aggcaggcac attaagtgaa gttgcggtcc ctctgccgcg
     8821 cctgatgcgt acgttgtggc gtatacatca tcggcaaaaa cacctttcca acgcgctacg
     8881 gcgctttctg gactattgcg atcccgcgaa tgtaccgcgt taaggtgctg tacaagaaca
     8941 tgctggtgct gtgtcgattt cgtgacgcag cgccctcagc atgcattcgc cagaaaagag
     9001 attggctgct ttacttataa tccctgggcg atcatgaagg tgtcttataa ccgtgtattt
     9061 ctgccggaag gattgccaat cgtctgctac aatcgcgctt catttttaag atggatagca
     9121 tttttgtatg ggttccgaaa ctaaaactac agaagcgccg ggcttacacc gtgaattaaa
     9181 ggcgcgtcac ctgacgatga ttgccattgg cggatccatc ggtacaggtc tttttgttgc
     9241 ctctggcgca acgatttctc aggcaggtcc gggcggggca ttgctctcgt atatgctgat
     9301 tggcctgatg gtttacttcc tgatgaccag tctcggtgaa ttggctgcat atatgccggt
     9361 ttccggttcg tttgccactt acggtcagaa ctatgttgaa gaaggctttg gcttcgcgct
     9421 gggctggaac tactggtaca actgggcggt gactattgcc gttgacctgg ttgcagctca
     9481 gctggtcatg agctggtggt tcccggatac accgggctgg atctggagtg cgttgttcct
     9541 cggcgttatc ttcctgctga actacatctc agttcgtggc tttggtgaag cggaatactg
     9601 gttttcactg atcaaagtca cgacagttat tgtctttatc atcgttggcg tgctgatgat
     9661 tatcggtatc ttcaaaggcg cgcagcctgc gggctggagc aactggacaa tcggcgaagc
     9721 gccgtttgct ggtggtttgg cggcgatgat cggcgtagct atgattgtcg gcttctcttt
     9781 ccagggaacc gagctgatcg gtattgctgc aggcgagtcc gaagatccgg cgaaaaacat
     9841 tccacgcgcg gtacgtcagg tgttctggcg aatcctgttg ttctatgtgt tcgcgatcct
     9901 gattatcagc ctgattattc cgtacaccga tccgagcctg ctgcgtaacg atgttaaaga
     9961 catcagcgtt agtccgttca ccctggtgtt ccagcacgcg ggtctgctct ctgcggcggc
    10021 ggtgatgaac gcagttattc tgacggcggt gctgtcagcg ggtaactccg gtatgtatgc
    10081 atctactcgt atgctgtaca ccctggcgtg tgacggtaaa gcgccgcgca ttttcgctaa
    10141 actgtcgcgt ggtggcgtgc cgcgtaatgc gctgtatgcg acgacggtga ttgccggttt
    10201 gtgcttcctg acctccatgt ttggcaacca gacggtatac ctgtggctgc tgaacacctc
    10261 cgggatgacg ggttttatcg cctggctggg gattgccatt agccactatc gcttccgtcg
    10321 cggttacgta ttgcagggac acgacattaa cgatctgccg taccgttcag gtttcttccc
    10381 actggggccg atcttcgcat tcattctgtg tctgattatc actttgggcc agaactacga
    10441 agcgttcctg aaagatacca ttgactgggg cggcgtagcg gcaacgtata ttggtatccc
    10501 gctgttcctg attatttggt tcggctacaa gctgattaaa ggaactcact tcgtacgcta
    10561 cagcgaaatg aagttcccgc agaacgataa gaaataagtt tcctcccttc cttgctaagc
    10621 cctctcaacc gagagggctt tttcaattcc atttccctga caaatcagag gctgttccgg
    10681 ctttctggga tgatcacctg catacaaata agtccaccgc gatgctgccg tacgcaaggg
    10741 gacgtaaaga agatgtgagc gatacccatt ttattttcgt agttacctca tggagatatg
    10801 gaatgtttag gttgaaccct ttcgtacggg tcgggctgtg tttgtccgct atttcttgtg
    10861 catggcctgt gttagcggtc gatgatgatg gcgaaacgat ggttgtcact gcatcttccg
    10921 tggaacaaaa tcttaaagat gcacccgcca gtatcagcgt cattacccag gaagacctgc
    10981 agcgaaaacc ggtacagaat ctgaaggatg tcctcaaaga agtgcctggc gtacaactga
    11041 cgaacgaagg ggataaccgt aagggcgtta gtattcgtgg tctggacagc agctacaccc
    11101 tgattcttgt cgacggtaaa cgcgttaact cccgcaatgc cgtcttccgc cacaatgatt
    11161 tcgatctgaa ctggatcccg gtcgattcca tcgaacgtat tgaagtggtt cgtggcccga
    11221 tgtcgtcgct atacggctcc gatgcgctcg gcggtgtagt gaatatcatc accaaaaaaa
    11281 tcggtcagaa atggtcgggt accgttaccg tcgataccac cattcaggaa catcgcgatc
    11341 gcggtgatac ctataacggt cagttcttta ccagtggacc attaattgat ggtgtgctgg
    11401 gaatgaaagc ttacggcagc ctggcaaaac gtgaaaagga tgacccgcaa aactcaacga
    11461 ccaccgatac cggagaaacg ccgcgtattg aaggattctc cagccgcgac ggcaatgtcg
    11521 aatttgcctg gacaccgaat caaaatcacg attttactgc cggatacggt ttcgaccgtc
    11581 aggatcgtga ttccgactcg ctggacaaaa accgcctgga acgccagaac tactccgtca
    11641 gccataatgg acgttgggat tacggcacca gcgaactgaa atactacggt gagaaagtcg
    11701 agaacaaaaa ccttggcaac agcagcccga taacttccga aagcaatacg gtcgacggca
    11761 aatacacgtt gccgctgacg gcgattaatc agtttctcac ggttggcggt gaatggcgtc
    11821 acgacaaact tagcgatgcg gtgaacctgg ccgggggaac cagctccaaa acgtctgcca
    11881 gccagtacgc gctgtttgtg gaagatgaat ggcggatctt cgagccgctg gcgctgacga
    11941 ccggcgtgcg tatggacgat cacgaaacct acggtgaaca ctggagtccg cgtgcctacc
    12001 tggtttataa cgccaccgac accgtaacgg tgaaaggggg ctgggcgacg gcatttaaag
    12061 caccttctct gttgcaactt agccctgact ggacgagcaa ttcctgccgt ggcgcatgta
    12121 agattgtggg tagcccggat ctgaaaccag cgaaagttgg gagctggggc tttactacat
    12181 gggtgaagaa ggctggctgg aaggggttga atccagcgtt accgttttcc gtaacgatgt
    12241 gaaagatcgt atcagcatca gccgtacgtc tgacgtcaac gctgcaccgg gctaccaaaa
    12301 ctttgttggt tttacagcga acggtgtgcc ggtatttagc tactacaacg ttaacaaagc
    12361 acgtattcag ggcgtggaaa ccgagctgaa aattccgttc aacgatgaat ggaaactgtc
    12421 actcaactac acctacaacg atggtcgtga tgtcagcaac ggcgaaaaca aaccgctatc
    12481 cgatctgccg ttccataccg ctaacggtac gctggactgg aaaccgcggg cgctggaaga
    12541 ctggtcattc tatgtttctg gtcactatac cgggcagaaa cgagccgaca gcgcgacggc
    12601 taaaacacct ggcggttata ccatctggaa taccggcgcg gcttggcagg tgactaaaga
    12661 cgtcaaactg cgcgcaggcg tgctgaacct tggcgacaag gatctcagcc gtgatgacta
    12721 cagttataac gaagatggac gtcgttactt tatggcagtg gattatcgct tctgatgaga
    12781 agatgcccgg cgaaccgggc ggactttcac ttcagtaaat actgcgcatg gaagcgcagg
    12841 tgatcctcta taaaagaggc gatgaagtag taactgtgat catatcccgg ctgaatacgc
    12901 agcgtcatcg gccatgcttt ttgacgggcg gcttccgcca gtaccgcagg ttgtagctgg
    12961 tcggcaagaa actgatcgtt atcgccctga tcaataagtg tcgggattgc atcctgcgca
    13021 ttgctggcgt acatcaacgc acaactgtcc cattccagcc atgcattttt gtcctcacct
    13081 aaataggtgc tatacgcttt aatgccccag ggtacgctgc acggattcac aattggcgca
    13141 aaggcggaaa cgctggtgta tttgcccggg tttttcagcg ccataatcag cgcaccgtga
    13201 ccacccattg aatgaccgct aatggcgcag cggtcgctga cattaaattg cgactgaacc
    13261 agcgccggta attcatcgcg cagataatca tacatccggt aatgcgtcgc ccacggcggt
    13321 tgtgtggcgt taagataaaa gcctgcgccc tggcctaaat catagccatc gtcgttggca
    13381 acctgttcac cgcgcgggct ggtgtctggc atcaccagta caatccccag ttccgccgcc
    13441 acgcgctggg cacccgcctt ggtggtgaag ttctcgtcat tgcaggttaa tccggaaagc
    13501 cagtacagca ctggtggcgg agtgtgatca cgaggtggtg ggagaaagat actgaacgtc
    13561 atcgggcagt ttaaggtact ggagtcgtgt cgccagcgtt gctgccagcc ttcaaaacag
    13621 cggtgctctt cgagcattcc catgcgtggc tccttgttgt gttgtttgca atttcttcat
    13681 cataccgttt attcaatgtg ctgtgagtaa ctttcacttc cgtatttgca taacgatgtt
    13741 ttaacatctg ctgatgaaag gcagcggcaa ttacaataat tatcgctgtg aatactggat
    13801 tatgtgcgcc gcctcacgca caataatcag gctgtaaatc agcttaataa ctttgccccc
    13861 acgcagggcg gaggcgtcac acctgcagga gaaatcataa atgccatcac tcagtaaaga
    13921 agcggccttg gttcatgaag cgttagttgc gcgaggactg gaaacaccgc tgcgcccgcc
    13981 cgtgcatgaa atggataacg aaacgcgcaa aagccttatt gctggtcata tgaccgaaat
    14041 catgcagctg ctgaatctcg acctggctga tgacagtttg atggaaacgc cgcatcgcat
    14101 cgctaaaatg tatgtcgatg aaattttctc cggtctggat tacgccaact tcccgaaaat
    14161 caccctcatt gaaaacaaaa tgaaggtcga tgaaatggtc accgtgcgcg atatcaccct
    14221 gaccagcacc tgtgaacacc attttgttac catcgatggc aaagcgacgg tggcttatat
    14281 tccgaaagat tcggtgatcg gtctgtcaaa aattaaccgc atcgtgcagt tctttgccca
    14341 gcgcccacag gtacaggaac gtctgaccca gcaaattctc attgcgctac aaacgctgct
    14401 gggcaccaat aacgtggctg tctctatcga cgcggtgcat tactgcgtga aagcgcgtgg
    14461 catccgcgac gcaaccagtg ccacaacaac gacctctctt ggtggattgt tcaaatccag
    14521 tcagaatacg cgccacgagt ttctgcgcgc tgtgcgtcat cacaactgat taaaaggcag
    14581 gaaccatgga gcgcaacgtc acgctcgatt ttgttcgcgg cgtcgccatt ctggggatcc
    14641 tgctattaaa catcagcgcc tttgggctac caaaggcggc ttatctcaat cccgcctggt
    14701 acggcgctat tacgccgcag gatgcatgga cctgggcatt tctcgatctc atcggccagg
    14761 tgaaattcct cacgcttttt gcgctgctgt ttggtgcggg cctgcaaatg ttgctgcccc
    14821 gtggcagacg ctggatccag tcgcggttaa cgctgttagt cttgctgggt tttattcacg
    14881 gtttattgtt ctgggacggc gatattctgc tggcttacgg gctggtgggc ttaatctgct
    14941 ggcggctggt gcgcgatgcg ccatcggtaa aaagcctgtt taatacaggc gtcatgcttt
    15001 atctggtggg gcttggcgtt ttgctgttat tggggctgat ttccgtcagc cagaccagcc
    15061 gcgcctggac gccggatgca tcggctattt tgtatgaaaa atactggaag cttcacggcg
    15121 gcgttgaagc gatcagtaat cgtgccgatg gtgttggcaa cagtttactg gcactgggcg
    15181 cacagtatgg ctggcaactg gcagggatga tgctcattgg tgcggcgctg atgcgcagcg
    15241 gctggctgaa agggcagttt agcttacgtc actatcgtcg tactggtttt gtgctggtgg
    15301 cgattggggt gaccattaac cttcctgcca tcgccctgca atggcagctg gactgggcgt
    15361 atcgctggtg tgccttctta cttcaaatgc cgcgggaact gagtgcgccg tttcaggcga
    15421 ttggctatgc gtcgctgttt tatggcttct ggccgcaatt gagccgcttt aagctggtgc
    15481 ttgcgatcgc ctgcgtcgga cggatggcgc tgaccaacta tctattgcaa acgctgattt
    15541 gtaccatgct tttttaccac ctcggtttgt ttatgcattt tgaccgcctg gagctgttgg
    15601 cgtttgttat tccggtatgg ctggcgaata tcctcttctc tgttatctgg ctgcgttact
    15661 tccgccaggg gccggtggaa tggctctggc gtcagttaac tttgcgtgct gccggaccgg
    15721 caatatctaa aacatcaaga taacgatctg gatcacattc gttaacaaaa cggctgtaac
    15781 cgtttccatt gctgtgactc gattcacgaa gtcctgtatt cagtgctgac aaaatagccg
    15841 ccagcaagca gtcatttact gcaatctcat aacaggtagt gaatatgatc accattcgtg
    15901 atgtagcgcg tcaggctggc gtctctgtgg caacggtttc ccgggtgctc aataacagca
    15961 cgctggtcag tgccgacacg cgtgaagcag taatgaaagc cgtgagtgag ctggattatc
    16021 ggccaaacgc caatgcccag gcgctggcaa ctcaggttag cgacaccatt ggcgtggtgg
    16081 tgatggacgt ttctgatgcg tttttcggcg cgctggtaaa agcggtggat ctagtcgctc
    16141 agcagcatca gaaatacgtg ctaatcggca atagctatca tgaagcggaa aaagagcgtc
    16201 acgccattga ggtgttaatt cgccagcgtt gtaatgcgtt gattgttcac tcaaaagcat
    16261 tgagtgacga tgaactggcg caatttatgg ataacattcc ggtatggtgt taatcaaccg
    16321 cgttgtgccg gggtacgccc atcgttgcgt ttgcctggat aatctcagcg gtgcccgaat
    16381 ggcgacgcgc atgttgctga ataacggtca tcaacgtatt ggttatcttt cttccagtca
    16441 cggcattgaa gatgacgcca tgcgtaaagc aggctggatg agtgcgttga aagagcagga
    16501 tattattccg ccggaaagct ggattggcac tggtacgccg gacatgccgg gcggtgaggc
    16561 ggcgatggtt gaactgctgg ggcgcaatct acaacttacc gctgtatttg cttataacga
    16621 caatatggcc gctggcgcac tgacagcatt aaaagataat ggcattgcga ttccgttaca
    16681 tctctcaatc atcggtttcg atgatattcc catcgcccgt tacaccgacc cgcaattaac
    16741 gaccgtgcgt tatcccattg cttcaatggc gaaattagcc accgaactgg ccttgcaggg
    16801 ggcagcaggc aatattgatc ctcgtgccag ccactgtttt atgccgacgt tagtgcgtcg
    16861 tcattctgtc gcaacgcgcc agaatgcggc ggcgatcact aactcaacaa atcaggcgat
    16921 gtaaccgctt tcaatctgtg agtgatttca cagtatctta acaatgtgat aactatgatt
    16981 gcaccgcttt aacgttgtaa cccgtatgta acagtgagta atcactttca ccgaggtaat
    17041 agcgtcataa caacaattaa agccgttttc tggagcgtta ccgggcatgg aagaacgaat
    17101 tttaaaaagt gagcttcggc gttcagtaac acttcattaa ctctactgcc ccgccgagca
    17161 tttatctcaa gcactaccct gcataagaaa aaccggagat accatgaata agaaggtgtt
    17221 aaccctgtct gctgtgatgg ccagcatgtt attcggtgcc gctgcacacg ctgctgatac
    17281 tcgcattggt gtaacaatct ataagtacga cgataacttt atgtctgtag tgcgcaaggc
    17341 tattgagcaa gatgcgaaag ccgcgccaga tattcagctg ctgatgaatg attctcagaa
    17401 tgaccagtcc aagcagaacg atcagatcga cgtattgctg gcgaaagggg tgaaggcact
    17461 ggcaatcaac ctggttgacc cggcagctgc gggtacggtg attgagaaag cgcgtgggca
    17521 aaacgtgccg gtggttttct tcaacaaaga accgtctcgt aaggcgctgg atagctacga
    17581 caaagcctac tacgttggca ctgactccaa agagtccggc attattcagg gcgatttgat
    17641 tgctaaacac tgggcggcga atcagggttg ggatctgaac aaagacggtc agattcagtt
    17701 cgtactgctg aaaggtgaac cgggccatcc ggatgcagaa gcacgtacca cttacgtgat
    17761 taaagaattg aacgataaag gcatcaaaac tgaacagtta cagttagata ccgcaatgtg
    17821 ggacaccgct caggcgaaag ataagatgga cgcctggctg tctggcccga acgccaacaa
    17881 aatcgaagtg gttatcgcca acaacgatgc gatggcaatg ggcgcggtag aagcactgaa
    17941 agcacacaac aagtccagca ttccggtgtt tggcgtcgat gcgctgccag aagcgctggc
    18001 gctggtgaaa tccggtgcac tggcgggcac agtactgaac gatgctaaca accaggcgaa
    18061 agcgaccttt gatctggcga aaaacctggc cgatggcaaa ggtgcggctg atggcaccaa
    18121 ctggaaaatc gacaacaaag tggtccgcgt accttatgtt ggcgtagata aagacaacct
    18181 ggctgaattc agcaagaaat aagactgatt gggcgcagtc gtttactgcg cccttattgt
    18241 atggccaaca aggtaaaatt atatggtcag ctcaacgact ccgtcttccg gggaatactt
    18301 gttggaaatg agcggtatca acaagtcctt tcctggtgtt aaggcacttg ataacgttaa
    18361 tttaaaagtc cggccacatt ctatccatgc attaatgggg gaaaacggtg caggaaaatc
    18421 gacattatta aaatgcctgt ttggtattta tcaaaaagac tccggcacca ttttattcca
    18481 gggtaaagag atcgatttcc attccgccaa agaggcactg gaaaatggta tttcgatggt
    18541 acaccaggag ttaaacctgg tattacaacg ttcggtgatg gataacatgt ggctggggcg
    18601 atatcccacc aaaggcatgt ttgtcgatca ggacaaaatg taccgcgaaa ccaaagcgat
    18661 ttttgatgaa ctggatattg atatcgatcc gcgtgcgcgc gtcggcacat tatccgtttc
    18721 gcaaatgcag atgatcgaaa tcgccaaagc gttttcctat aacgcgaaaa ttgtgattat
    18781 ggatgaaccg acttcttcgt taaccgaaaa agaggtc
//
LOCUS       DAJVTL010000088        18729 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.089, whole genome shotgun sequence.
ACCESSION   DAJVTL010000088 DAJVTL010000000
VERSION     DAJVTL010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18729
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.089"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            328..1044
                     /locus_tag="OQQ26_002889"
     CDS             328..1044
                     /locus_tag="OQQ26_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HCS1858279.1"
                     /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
                     TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
                     VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGSEPDHIFEILLEAEVDVRD
                     VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
     gene            complement(1499..1574)
                     /locus_tag="OQQ26_002890"
     tRNA            complement(1499..1574)
                     /locus_tag="OQQ26_002890"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1539..1541),aa:Asn,seq:gtt)
     gene            complement(1675..3315)
                     /gene="yeeO"
                     /locus_tag="OQQ26_002891"
     CDS             complement(1675..3315)
                     /gene="yeeO"
                     /locus_tag="OQQ26_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic metabolite efflux MATE transporter YeeO"
                     /protein_id="HCS1858280.1"
                     /translation="MLRHILTAKNLLSNPIFNFPNCLPFLSTVCCICRQFVGENLCSF
                     ADSPSLFEMWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIF
                     MENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLG
                     KRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKALALTYLEL
                     TVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIISGILIYGLFSWPGLGFVG
                     AGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVES
                     VLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQ
                     IAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGLMASFYTQDPQVKHVVVILIWLNALFM
                     PIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMFA
                     DWAVRAVLFYWRMVTGRWLWKYPRPEPQKCEKKPLVSE"
     gene            3320..3395
                     /locus_tag="OQQ26_002892"
     tRNA            3320..3395
                     /locus_tag="OQQ26_002892"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3353..3355,aa:Asn,seq:gtt)
     gene            complement(3433..4383)
                     /gene="cbl"
                     /locus_tag="OQQ26_002893"
     CDS             complement(3433..4383)
                     /gene="cbl"
                     /locus_tag="OQQ26_002893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator Cbl"
                     /protein_id="HCS1858281.1"
                     /translation="MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDEL
                     GIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHT
                     QARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVA
                     FPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLA
                     DIVLSAQDSDVIKTYVALGLGIGIVAEQSSGEQEEKNLIRLDTRHLFDANTVWLGLKR
                     GQLQRNYVWRFLELCNAGLSVEDIKRQVMENSEEEIDYQI"
     gene            complement(4485..5402)
                     /gene="nac"
                     /locus_tag="OQQ26_002894"
     CDS             complement(4485..5402)
                     /gene="nac"
                     /locus_tag="OQQ26_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen assimilation transcriptional regulator
                     NAC"
                     /protein_id="HCS1858282.1"
                     /translation="MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELN
                     QQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTA
                     ASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQA
                     LLKEDLFLVGTQDCPGQRVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGE
                     IESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANL
                     SPQAQVVKELLMSVMSSPVMEKRQWQLVS"
     gene            5728..5803
                     /locus_tag="OQQ26_002895"
     tRNA            5728..5803
                     /locus_tag="OQQ26_002895"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5761..5763,aa:Asn,seq:gtt)
     gene            5965..7227
                     /locus_tag="OQQ26_002896"
     CDS             5965..7227
                     /locus_tag="OQQ26_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1858283.1"
                     /translation="MSLNDSKIRKLKSSSRPVKLSDSHGLYLLVNPGGSRIWYLKYRF
                     NGKESRVSLGAYPLVSLAEARQQRDGIRKLLAQNINPAQQRMAEKAACSPEKCFKAVA
                     LAWHKTNKKWSADYAARILASMENHIFPAIGHLPVATLKTQDFTALLRVIEDKGFLEV
                     ASRTRQQLSNIMRYAVQQGLTESNPAQHLDGVVASPVKNHYPALPLERLPELLGRIGD
                     YQQGRELTRLAVVLTLHLFIRSSELRFAHWSEIDFRHKIWTIPATREAIDKVRFSGRG
                     AKMRTPHIVPLSRQAIAILKQIQELSGHLDLVFPGDHNPYKPMSENTTNRALHLMGYD
                     TKTEICGHGLRAMACSALVESDLWSRDTVERQMSHQERNSVRAAYVHKAEHLEARKAM
                     MQWWSDYLDVCREGYVAPYIYARQHKAA"
     gene            complement(8606..9490)
                     /locus_tag="OQQ26_002897"
     CDS             complement(8606..9490)
                     /locus_tag="OQQ26_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001587348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase domain-containing protein"
                     /protein_id="HCS1858284.1"
                     /translation="MSKLSSEMKVLAKKAGGSFKTVNDRIHITKRFSEHLRALNIQIQ
                     RVEQIRVRHIECYIEERLEQDIGLRTLQNDMAALQAVLRQAGRRQVVEHSRLTNKALG
                     VSGASRNGTRRAITPEHYQQVMEKARAEDAGLAVALEIARLMGLRSQETVQSSLSLKT
                     WLKAIERGENRLKVMFGTKGGRPRHTTALDTGAVRKAVEKALIVAEQHNGRLIDKPDL
                     KMALESWHKQVIKVGLKGEFSPHSLRYAWAQDAIRHYLAQGFSEKESLALTATDLGHG
                     DGRGRWVKQVYGYRWKEE"
     gene            9709..9942
                     /locus_tag="OQQ26_002898"
     CDS             9709..9942
                     /locus_tag="OQQ26_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858285.1"
                     /translation="MASQTAEIWRRPELARLAAVSCAASLCFFADAIKVTPRLVQRIN
                     VAFLVQGDGHAAASLLSLQAAARQCKALVVSRR"
     gene            complement(10396..10845)
                     /locus_tag="OQQ26_002899"
     CDS             complement(10396..10845)
                     /locus_tag="OQQ26_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858286.1"
                     /translation="MATTLTSECNLLVIPFSAATNFTTLADYCEHFAETIIECHDLAL
                     KMAPCGRLSTCLALLRPTLGEPIPPHLIDRFTVDVLPDVLPEFTPDADLLCDYCLALA
                     QVLLGRSLLPETETTLTGLLCDLVWYFADGLKAPRWICTTDGVQPCQ"
     gene            11357..15598
                     /locus_tag="OQQ26_002900"
     CDS             11357..15598
                     /locus_tag="OQQ26_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
                     /protein_id="HCS1858287.1"
                     /translation="MSGKPAARQGDATMKGGPIVQGSAGVRIGAPTGVACSVCPGGVT
                     SGNPVNPLLGAKVLPDETDFALPGPLPFILSRTYSSYRTKTPAPVGIFGPGWKAPSDI
                     HLQLRDNELILNDNGGRSIHFEHLFPGEDGFSHSELFWLVRGGVAKLNESHRLAPLWQ
                     ALPEELRMSPHIYLATNSPQGPWWILGWSERVPGVDEMLPAPLPPYRVLTGLVDRFGR
                     TLTFRREAAGEFTGEITGVTDGAGRQFRLVLTTQAQRAENARQQAIAAGAKGPDIPDS
                     LPDYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYDWTPRGELAAVYDRSGTQMR
                     HFTYDEKYRGRMVAHRYAGRPEMRYRYDGTGRVTEQFNPAGLSYTYQYEKNRITITDS
                     LNRREVLHTEGEAGLKRVVKTELADGSITRSKFDYMGRLQSQTDAAGRTTEYSPNVVT
                     GLVTCITTPDGRKSEFYYNNQNQLTSATGPDGLEMRRKYDEYGRLTQETAHNGDVTRY
                     SYDNPHSELPSATEDATGSRKQMTWSRYGQLQTFTDCSGYETHYEYDRFGQMMAVHRE
                     EGISTYNTYNPRGQLVSWKDTQGRETQYEYNAAGDLTAVITPDGNRSETLYDAWGKAV
                     STTQGSLTRSMEYDAAGRVISLTNENSSHTEFSWDVLDRLIQQRGFDGRTQRYRYDLT
                     GKLTQSEDEGLITLWHYDESDRITHRTVNGEPAEQWRYNDHGWLKEISHLSEGHRVAV
                     HYGYNRKGRLTGERQTVHNPETGELLWQHETKHAYNEQGLANRFQADSLPPVEWLTYG
                     SGYLAGMKLGDTPLVEYTRDRLHRETVRSFGNNAYELTSTYTPAGQLQSQHLNSLVYD
                     RDYGWNDNGDLVRISGPRQTREYGYSATGRLESIRTLAPDLDIRIPYATDPAGNRLPD
                     PELHPDSTLTAWPDNRITKDAHYLYRYDEYGRLTEKTDRIPTGVIRTDDERTHHYHYD
                     SQHRLVFYTRIQHEEPLVESRYLYDPLGRRTGKRVWRRERDLTGWMSLSRKPEVTWYG
                     WDGDRLTTVQTDTTRIQTVYQPGSFAPLIRIETENGELDKAQRRSLVEKLQQEGSEDG
                     HGVVFPVELVRMLDRLEGEIRANCVSSESRQWLAQCGLTVEQLARQVEPEYTPARKVH
                     LYHCDHRGLPLALISEDGNTMWSAEYDEWGNLLNEENPHHLYQPYRLPGQQYDDESGL
                     CYNRNRYYDPLQGRYITQDPIGLSGGWNLYQYPLNPVHKVDPLGLSAWDDAKSGACHE
                     GICRLFSVFIGPDKFDSTDDAAFEALKKINGHSICQGVEHAGLVCKDKNNKYFYTPPK
                     QGNVNTSYPFESPCPNGTETVAMYHTHGSDSNGVYGDEVFSPADKELSKNKGISSYLG
                     TPKGSFQKVEPNGDQPMNKSGLPSQCRVHANGEIY"
     gene            15598..15930
                     /locus_tag="OQQ26_002901"
     CDS             15598..15930
                     /locus_tag="OQQ26_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000867001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858288.1"
                     /translation="MKVMIILMLSILPLLPSFSHGESAECSLENSDSKSNYFVGNKEL
                     VGKLAEIYVEDRYGKDNAMREKPYHISDKGNFWQVSGNIDPNATGGVFVIKIDKVNGR
                     IISFTHGK"
     gene            complement(16007..16603)
                     /locus_tag="OQQ26_002902"
     CDS             complement(16007..16603)
                     /locus_tag="OQQ26_002902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001145615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858289.1"
                     /translation="MPVVFSHGVMNIAEPKMYTDENDFRNNVPGMNINCIDKLRDDNF
                     YLVDTINQVVIKRYNTVRIPRLLGSAERCSLQVAEDNHDKINKFGAADKTCLPYYLTP
                     KPKSHAVSQYQQLFIEKRGNEALLFCTKSNQPNQIMDRATLVYNLVATTFDGKEADVM
                     AQPATELLLRTLTYDTTRYNEVSQTSLLEKISRLMLHN"
     gene            complement(16690..18117)
                     /locus_tag="OQQ26_002903"
                     /pseudo
     CDS             complement(16690..18117)
                     /locus_tag="OQQ26_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000129935.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(18110..18712)
                     /locus_tag="OQQ26_002904"
     CDS             complement(18110..18712)
                     /locus_tag="OQQ26_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858290.1"
                     /translation="MAEESSGTEQRIFAKILGLDATPLQQYIPIPSLLPLLIGNIGEW
                     QLHLILQEMNITLIPPQELSYYLDSSCYELFDVYCINKNRIVAIDVKNWRMQGNNRQL
                     AKKMHNNSLGKVSELQKIVTAKTQFDGVDVVYLNTRYALNSLNIRAEHSNHKGVCYYN
                     LFKNISSYEKDNGKNPYDAKIKSELRVNQYLLNLLGANYD"
BASE COUNT         5113 a         4587 c         4408 g         4621 t
ORIGIN      
        1 cttatcaaaa atagatgtga aggattaagt aagacatctg gcaaatagcc cgcaataaac
       61 gcgggctgtt tgcttccttg ggcggatacg agttttatta tcgtcttaat gatttccaca
      121 tattaaaagc aagtatgctt tcaaaacaca attataaaaa atcccgccaa caatataagt
      181 ttttataaaa ttaaatataa gattatggct ttagaatatt tttatttcta atagacgaga
      241 tttttcctgt tatgatataa tatgccgaat taacacatgt taacgattta ccagtaatgt
      301 aaataaattt tcgaggagat cattccagtg ggacgtaaat gggccaatat tgttgctaaa
      361 aaaacggcta aagacggtgc aacgtctaaa atttatgcaa aattcggtgt agaaatctat
      421 gctgctgcca aacaaggtga acccgatcca gaattaaaca catctttaaa attcgttatt
      481 gaacgtgcaa agcaggcaca agttccaaag cacgttattg ataaagcaat tgataaagcc
      541 aaaggcggcg gagatgaaac gttcgtgcag ggacgttatg aaggctttgg tcctaatggc
      601 tcaatgatta tcgccgagac attgacttca aatgttaacc gtacgattgc taacgttcgc
      661 acaattttca ataaaaaagg cggcaatatc ggagcggcag gttctgtcag ctatatgttt
      721 gacaatactg gtgtgattgt atttaaagga tcagagcctg accatatttt tgaaatttta
      781 cttgaagctg aagttgatgt tcgtgatgtg actgaagaag aaggtaacat tgttatttat
      841 actgagccta ctgaccttca taaaggaatc gcggctctaa aagcagctgg aatcactgag
      901 ttctcaacaa cagaattaga aatgattgct caatctgaag ttgagctttc cccagaagat
      961 ttagaaatct ttgaagggct tgttgatgcc cttgaagatg acgacgatgt acaaaaagtt
     1021 tatcataacg tcgcaaatct ctaattatat tttaaagaaa tctgtcttta tggcagattt
     1081 ctttaatctc atataatcct tataaaaaat ataatgttta actcgtcata cttcttataa
     1141 ccccccccat tcccagagaa ataatattta ttaacatggc aggtcttctt tttctgatta
     1201 ccgaagacaa agtggcaatt acgtatagtt tcccgataaa gacgtgacag cgacatcccg
     1261 cataaggcat ttttctcttt atctttgtac ggtacttcat ggaacagaat ttttgacctt
     1321 gtgaatcgtg atgtctgttg gggaggggta atttgctcac tgaagcgtga gactcgatta
     1381 agcgcacaaa acacagaaat caaaaaaccc ggtcactttt ttacaaagtg accgggtaaa
     1441 aataattttt attttttaac tgccttgaga ctcatagaga tgtctcaaaa ctaaaatttg
     1501 gctcctctga ctggactcga accagtgaca tacggattaa cagtccgccg ttctaccgac
     1561 tgaactacag aggaatcgtg agaacgaggc gaatattagc gatgcccacc cacaatgtca
     1621 aagcctgttt tttaaatttg aaatcgtttg ctgaaataat ctgcattttg tcgtttattc
     1681 cgacacaagt ggcttttttt cacacttttg cggttcgggt cgagggtatt tccacagcca
     1741 acgtccagta accattcgcc agtaaaacag cacggcccgc acagcccagt cggcaaacat
     1801 tcccatccag acaccaacca caccccagcc aagcatgatg cccagcacat aaccgacgac
     1861 aacccggcaa ccccacatgc tcaacataga aacccacatg gcgtaacggg catcgcgagc
     1921 acctttaaat ccagcgggta gcacccatga ggcggaccaa ataggcataa ataaagcatt
     1981 tagccaaatc agaatcacaa cgacatgttt aacctgtgga tcctgggtgt aaaacgatgc
     2041 cataagcccg gcaaagggag ccgttagcca ggcgatggcc gttaatccaa gagtggacag
     2101 ccagaacaca tgccgtaact gaatctctgc ttgcgctatc tgccctaccc ccaaccttcg
     2161 gcctgtaatg atcgtagaag cagagccgag cgcacttccg ggtaagttga taagagccgc
     2221 aattgaaaac gcgataaaat ttccggcaat aacactggtc cccatcccgg caacgaacat
     2281 ttgggttaat aaccgaccac tggtaaataa cactgattcg acactcgcgg gaataccaat
     2341 ccccatgact tcccagataa tgctaaaatt cagcggttta aaatagctct ttaacgaaat
     2401 ccttagcgca ggattaaaac caatcgccag cacccacaaa attgcaactg cgccaatata
     2461 acgagaaatg gttaaaccca acccagcccc gacaaatccc agtcccggcc aggagaaaag
     2521 gccgtaaatc aatatgccgc taataatatt aagaatattc aggctaccgt taatcagtag
     2581 cggtattttc gtattccctg caccacgaag tgccccgcta ccaattagag tgatggcagc
     2641 tgctggataa ctgagtaccg tcagctccag ataagtcaac gccagtgctt taacttctgt
     2701 cgtggcatca cccgcgacaa aatcaataat ttgctcgcca aaatgatgaa taagcgttgc
     2761 caacagtacg gcaaacaacg tcatgatcac caatgactgc cgcgtcgcca ccctcgctcg
     2821 tcgtcgatcc cgcttaccga gactaaatgc cacaacgaca gtagtaccaa gatcgatagc
     2881 agcaaaaaaa gccataatga ccatattgaa gctgtccgcc aatcccacgc cggccatcgc
     2941 atcttttccc agccagctga ccagaaaagt gctcagaacc cccatcaaca ggacacaggc
     3001 attctccatg aagataggaa cagcaagcgg ggttatctcg cgccagaaca acactttgta
     3061 gctcttgcgt ttagcgtgcc agcgagtgcc gtgaacaacc tggcgtaaag cagaggagat
     3121 attcaaagcc gaccttaatt gcagaaagtg aaaccacatt tcaaataatg agggagaatc
     3181 agcaaagctg caaagatttt cgccaacaaa ttgtctgcaa atgcaacaaa ctgttgatag
     3241 aaacggcaaa cagttgggaa aattaaaaat cgggtttgac aaaagatttt tcgccgttaa
     3301 gatgtgcctc aacagcgatt cctctgtagt tcagtcggta gaacggcgga ctgttaatcc
     3361 gtatgtcact ggttcgagtc cagtcagagg agccaaattt ctgaaaagcc cgcttttata
     3421 gcgggctttt tgctatatct gataatcaat ttcctcttca ctgttttcca tcacctgccg
     3481 cttgatatcc tcaactgaaa gtcctgcatt acaaagttcc agaaagcgcc agacatagtt
     3541 acgctgaagt tgtcctcgct tcagtcccaa ccagacagta ttagcatcaa aaagatgccg
     3601 cgtatccagg cggattaaat tcttttcctc ttgttcaccg ctggattgtt cggcaactat
     3661 tccgatccca agcccaagag caacataggt tttaatgaca tcagaatcct gcgcacttaa
     3721 tacaatatct gccagcaaac ctttgcgggc aaatgcgtca tcaatacgtg agcgccccgt
     3781 aatcccctgt cggtaagtga ttaacggcca cttcgctatt gattccagcg tcaatggtgt
     3841 aatttgcgtt aagggatgat cgagtggaac aagcaaacta tggtgccaac gaaaccacgg
     3901 gaaggcgacg agctgcgggt cattactcaa acgctcgctg gcgataccaa tatcagcttc
     3961 gccattttgc aacaatgtcg caatttcctg tggcgtcccc tggattagct cgagccgaac
     4021 ctccgggaaa agttcgcgaa aagctttaat gacctctggc aagctataac gtgcctgagt
     4081 atgcgtcgtt gcaatagtga gaacgccaga cgtatcgttg gtaaacaggt ctgcaagccg
     4141 acgaacatta ctggcttcat tcagaatacg ttctgcaatg accagtaatg ctttgcccgg
     4201 ttcagtcatg cccagcagtc gcttacctcg tcgaacaaat atttcgatgc caagttcatc
     4261 ctccagttcc cgaatatgac ggctgacgcc tgactgtgag gtaaaaagca tattcgcaac
     4321 ctctgtcagg ttgtaatcct gacgtgcagc ctcgcggatt atctttagtt gttggaaatt
     4381 cacggtaaac tccgggcagt tcagatttcc cgttattgtt aaagtctaat gcccggcata
     4441 acaaataata aaaacccgca tcttattcca tcccgatata acgcttagct caccaattgc
     4501 cactgccttt tttccatcac tggagaactc atcactgaca ttaacaactc tttcactacc
     4561 tgtgcctgtg gcgataagtt cgctctggcg ggtaaattta atgacaaaga gagactcatg
     4621 gaaggagtgg taatgcgtga catccaccca tttactgcgc cacataacga acgcgcggcc
     4681 gattcgggta atactgcaac gcccatgccg ctggcaatcg ctgcggtaag cgtggcaata
     4741 gactcaattt caccaataac ttttgccgtg agtcgccgta gggaaaaagc ctcatcaaca
     4801 cgaagtctaa tagcactgta atcactgggg agaaagaggt tcatttgtgc aatagcatta
     4861 acatcaactc tttgccccgg acaatcttga gttcctacca ggaaaagatc ttctttcagc
     4921 aaagcctgac tggatacccc agccacaggg gaatgctcat aaatcaccgc catatcgagt
     4981 tggtgattta tcagtttttc gttaagcact gcaccgctat tttcatgaag atagataacg
     5041 atctccggga attcagcgcg aaccgcctgt aataagggca tggtgatgga tgacgcagcg
     5101 gttcctggcg caaagccaat cgagacttgc cccgataatg cctgaccaac gttatgcacc
     5161 gccagttggg cctgctcaca ctgacgtaaa atggcccgcg catgggtata gagaattttt
     5221 ccggcgtctg ttggcgtaac gccccgtttt gtgcgaatca aaagttgttg atttaactca
     5281 ccttccagtg tggcaacctg ctggctgagc gctggttgtg caatatgcaa tacttcagca
     5341 gcctgggtca ggctaccaat atctacaatt tttacgaagt atttcaggcg tctgaagttc
     5401 atgttgcctc cggtttttaa gaatcggccc aagtgccgcc attacttaca accagactgc
     5461 aagatgcttg ccagttttat tttggcgttg atgtacaagc taaccaactg tcaaataaga
     5521 gattatgata gattcgtcat tggctctttt tatcagcact cgcgttcccc tgccccataa
     5581 aaggagggta tgcaccacga tggttcatta ccaataagat tgaaagctca ccactttgtt
     5641 gaaaatgaca gcaaacaaac aaaaaaatgc atttcaccct ttgacatcac catgcactgc
     5701 cattaatatg cgccccgttc acacgattcc tctgtagttc agtcggtaga acggcggact
     5761 gttaatccgt atgtcactgg ttcgagtcca gtcagaggag ccaaattcaa gttttcatgc
     5821 ttctttatac gtctctttct gattaagatt cagtaagtta gcgtgaaaat ccttgccggt
     5881 gcgtatctgg ttttctctcc gcatcgggat aatttggtgg tcagatctgg gggcagtttg
     5941 gttcgattct ggagtgaccc ccaaatgtct ttaaacgatt ctaaaatccg caagttaaaa
     6001 tcttcttccc gtccggtaaa actctccgac tctcatggtc tgtatctgct cgtcaatccg
     6061 ggcggttcac gtatctggta tctcaaatat cgtttcaacg gaaaagaatc cagagtcagt
     6121 cttggtgcat acccgctggt ctcactggcg gaagccaggc aacagcgcga cggtatccgt
     6181 aagttactgg cgcagaatat caacccggcg cagcagcgca tggcggagaa agcggcctgc
     6241 tcccctgaaa agtgctttaa ggcggtggcg ctggcctggc acaaaaccaa caaaaaatgg
     6301 tcggctgatt atgccgcccg tattctcgcc agtatggaaa accatatctt cccggcgatt
     6361 ggtcatctgc ccgttgccac gcttaaaacg caggatttca ctgctttgtt gcgggttatt
     6421 gaggataaag gctttctgga agtcgcgtcc cgaacccggc agcaactcag caacatcatg
     6481 cgctatgccg ttcagcaggg gcttaccgaa agcaatccgg cgcagcatct ggatggcgtt
     6541 gtcgcttcac ccgtaaagaa tcactatccc gctttaccgc tggagcggtt gcctgaactg
     6601 cttggccgca tcggtgacta tcagcagggc cgggagttaa cccggctggc ggtggtgctg
     6661 acgctgcatc tgttcatccg ttccagcgaa ctgcgtttcg cccactggag cgagattgat
     6721 ttcaggcaca aaatctggac catccccgcc acccgcgagg ccatcgacaa agtacggttt
     6781 tcgggtcgtg gcgcaaaaat gcgtactccg catatcgtgc cgctctcccg tcaggcgatt
     6841 gccattctga aacagataca ggagctttcc ggccatctgg atctggtgtt tcccggtgat
     6901 cataacccgt acaagccaat gagtgaaaac accaccaacc gggcgctgca tctgatgggg
     6961 tatgatacga aaactgaaat ctgcgggcat ggactcagag caatggcctg tagtgccctg
     7021 gtggagtcgg acctgtggtc acgcgatacg gtggagcggc aaatgagcca ccaggagcgt
     7081 aacagcgtgc gggcggcata cgtgcataaa gcggagcatc tggaggccag aaaggccatg
     7141 atgcagtggt ggtcggatta tctggatgtg tgccgcgagg ggtatgtcgc gccgtacatt
     7201 tatgcgcggc agcataaagc agcctgaatc agaaatagcg taaatcatta aaactggaaa
     7261 agcagatcct gattgagcgg gatctgtttt tttgtattga gaggtattgt cgctgttttt
     7321 attattaatt ggctttcccc caaaattatc cactggtgaa tagttttggg tgaaagccaa
     7381 tcaatagacc acatatcaat aggtaaatac caaaaattag tccagtagaa tatttgcagg
     7441 cgactgccta ttaataaatg cattattgat agataactac cttctgtgat ttgcctgcaa
     7501 atcacagaag atgaaaacct atcaatacgg gatattttca cgaaaataca aattaatact
     7561 ccagaatatc tgcaccagaa tatctcctga ccctatactc tgaaacctgt aagaactgca
     7621 tcagatattg agagaccaga tagatgtaag tctgaaatta ttttgtttcc aatgatttca
     7681 ggcgaaaaac ctatcaatac atctgttttc aacaggcagc caccttccgt gattaacatg
     7741 ttaatcacgg aaggtgaaaa gctatcaata atcgatattt ccacggaatt accacttaat
     7801 acatcccaaa aaatgcgcca taaaataccg gacaatcttt cctgatacac attatcactg
     7861 caccagctat acagagacaa aataatctgc acccgtcctg gataatctgc tatctgcgcc
     7921 agcgtcccgc cgctctacct gttcagggct gcgccagttc ctggcccttt agtttttggc
     7981 cctttcaggt caggcgctgt tacccttatc gcccccttaa cctttatgac cctttccctt
     8041 tctggcgcag ccagtttatt cggaaataca ccatgactgc ctgcaccaga ttgcatttca
     8101 ccacacaata acggtcacag agtgcaaaaa aataacatga agcagcgaaa attgttaatt
     8161 tatatgcagc aggttatgat atcaaaaacc gtcgcagcat ttttataaaa tcatgaggca
     8221 tcctgagacc atacaatata tgtaacagga tacggaaaaa cacagagaga attattcaga
     8281 tataaccctg tgccagaatt aatgtgagcc ccggtgaatt tacattttaa aattttccca
     8341 accctgtagt atcggtaaaa acgattgaaa cacctgttat taccagggag catttcgagt
     8401 gattacaggg ataatcacta taatattccg gcaaactata ttggtgaagc agggaaatct
     8461 gatctgttga tatttattcg tcatgctgta acgatatttt cacaatacaa acccgctcgc
     8521 ccctgcgcca gatccggtac agagggtacg ataaatcgct gtcgttacgc agtaacgtac
     8581 tattttgcgc cattcatgaa ttcagtcatt cctccttcca gcggtagccg tacacctgtt
     8641 tcacccagcg cccacgaccg tcgccgtggc ccagatccgt cgccgtcagc gccagtgact
     8701 ccttttcgct gaatccctgc gccagataat ggcggatcgc atcctgcgcc caggcatagc
     8761 gcagggagtg aggggaaaat tcccccttca gccccacctt aatgacctgt ttgtgccagc
     8821 tctccagcgc cattttgaga tcaggcttgt cgatcagcct gccattgtgt tgttctgcta
     8881 caattaacgc tttttcaacg gctttcctga ctgcgccagt atccagagct gtcgtatggc
     8941 ggggacgccc acctttggtg ccaaacatca ctttcagccg gttttccccg cgctcaatgg
     9001 ctttcagcca cgttttcagc gacagtgaac tctgtaccgt ttcctgcgag cgtaacccca
     9061 tcagtcgcgc gatctccagc gccacagcca gccccgcatc ctcagcgcgg gctttctcca
     9121 tcacctgctg gtaatgttcc ggcgtaatgg cgcggcgcgt accgttgcgt gaagcgcccg
     9181 acactcccag cgccttattg gttaggcgtg aatgctccac cacctgcctg cgtccagcct
     9241 gtctcagcac ggcctgcagt gccgccatat cgttttgcag cgttcgtaaa ccaatatcct
     9301 gctccagccg ttcctcaatg tagcattcga tatggcgaac cctgatctgc tccacccgct
     9361 ggatctggat attcagcgcc cgtaaatgtt cactgaaccg ttttgtaata tggatacgat
     9421 cattcactgt tttgaagctg ccgcccgctt tcttcgccag caccttcatt tcactgctta
     9481 atttactcat gactccccct gcaacaaaaa caaacagtct ccggcgtgtg ctttttggct
     9541 gcgccagaac gataccttca cgccggagtg gcagtctgtt gaggtttagg gagtttcagg
     9601 ctgtacgcag tacagactgc ctgacgaagc aggggtgtct ccggggcgtc atgtccccct
     9661 cggtatcgat ctttttctcc tcttactctg agctgacagc ggccccaaat ggcatctcag
     9721 acggcggaaa tatggcgcag gccagaactg gcacggcttg cggcggtgag ttgtgcggcg
     9781 tcactttgct ttttcgctga cgcgatcaaa gtgacgcctc gtctggtgca gaggattaac
     9841 gttgcgtttc tggtgcaggg tgacggtcac gcggcagcaa gcctgctgtc tttgcaggcc
     9901 gcagcccgtc aatgtaaggc gctggttgtc agcagaagat aaaacccggc aaagccagag
     9961 tgtcagcccg taaagtcggg tatctggtgc agtgatggtg tatatgtacg tcagtctcag
    10021 atgcaggtat ttttgcatcc ccggcgtttt cagagatcaa cgccggtaaa ggatgccatg
    10081 ctggcgaagc caggcgcttc tttcagacgt gaagcgacaa agggactgcc cggaggcagt
    10141 ttgttgcagg cgggagactg cgccattatt tctggtgcag gaaggaaaaa ctgtttccgg
    10201 gtttaaaata ttgtttgctt acctggtgac ggaaaaactg ccgcgcttcg cttgtcttct
    10261 cccggcgcgc tgccagcaaa agcaggcagc gcgccgggag agtctggttt tactgtaaca
    10321 gtgttcctgc cggttcagtt atcaggacta acactttcac atcggtcctc cggtatggtt
    10381 gcatcatccc tgcctctact gacagggctg cacgccgtca gtggtacaaa tccagcgcgg
    10441 agctttcaga ccatcggcaa aataccagac cagatcgcac agtaacccgg tcagcgtcgt
    10501 ttcggtttcc ggcaacagtg accgtcccag cagtacctgc gccagcgcca ggcagtaatc
    10561 acagagcagg tctgcatcag gggtaaattc cggtaaaaca tcaggaagaa catccacagt
    10621 aaagcggtcg atcaggtgcg gcgggatcgg ttcgcccagc gtgggccgca gcagtgcaag
    10681 acaggtacta agcctgccgc agggcgccat tttcagcgcc agatcgtggc actcgatgat
    10741 cgtttcagcg aaatgctcgc agtaatccgc cagagtggtg aagttggtag cggcgctgaa
    10801 gggaatgacg agtaaattgc attcagaagt gagggtagtt gccatagggg cagcctccag
    10861 tgagtgatga tgatctccac caccggaaat gccaatttca cgggtggtga aaccggacgg
    10921 agttggcatt accggcctca ctgacaccgg cgcgtcttac gacgtccccg cccgatccca
    10981 ccattgagat gtgaccatac gcaacacaaa atattgtgtt gtcagtgaag tattacagga
    11041 tgccaatccc gacgcctgat tttgcagacg cggcgcaaca atacaatgat cggtaatttg
    11101 cggcaagagg tttggagaaa gcaggtaaac tcaatcacac cataaatatt aagactaaat
    11161 atatttatat gaaatatacg ttgaataata tacaaacgtt tttcaataaa aatcctgtca
    11221 attaattctt cccgttgata tcagtcaaaa aaataaatgt aaaaaagcgt atttcgtttc
    11281 atacagtaac gttatttatc attttgtccg gtgccgccag catcaggcca gatgaaccat
    11341 aaaaaggata tcagcgatga gcggaaaacc agcggcacgt cagggcgatg ccacaatgaa
    11401 aggtggcccg atagtccagg ggtcggcagg cgtgagaatt ggtgcgccaa ccggcgtggc
    11461 ctgctcagtg tgccccggcg gagtcacttc cggcaacccg gtgaatccgc tgctcggtgc
    11521 aaaggtgctg cccgacgaaa ccgatttcgc gctgcccggc ccgttaccgt tcattctttc
    11581 ccgcacctac agcagctacc ggacgaaaac ccctgcgccc gtcggtatct tcggtcccgg
    11641 ctggaaagcg ccctctgata tccacttaca gttacgcgat aacgaactga tactcaatga
    11701 taacggtggc agaagcattc attttgagca cctgtttccc ggtgaggatg gcttcagcca
    11761 cagcgaatta ttctggctgg tgcgcggcgg cgtggcgaaa ctgaatgaaa gtcaccgtct
    11821 tgccccactc tggcaggctc tgccggaaga actccgcatg agtccgcata tttatctggc
    11881 gacgaacagt ccgcaggggc cgtggtggat actcggctgg agtgagcggg taccgggtgt
    11941 ggatgagatg ctgcctgctc cgctgccgcc gtaccgggta ctgaccggcc tagtggaccg
    12001 cttcgggcgc acactgacct tccggcgtga ggccgcaggc gaatttaccg gggaaatcac
    12061 cggcgtgacc gatggcgccg gccgtcagtt ccgtctggtg ctgaccacgc aggcacaacg
    12121 ggcagaaaac gcccggcagc aggccatcgc cgcaggagcg aaaggaccgg atatcccgga
    12181 ttcactgccg gactatacgg agtatggccg ggataacggt atccgcctgt cagcggtgtg
    12241 gctcacgcac gaccctgaat acccggagaa tttacctgcc gcgccactgg tgcgctacga
    12301 ctggacgcca cgcggtgagc tggcggcggt gtatgaccgc agcggtacgc agatgcgcca
    12361 ctttacttac gatgaaaaat accggggccg gatggtggcg caccgttacg caggcaggcc
    12421 ggagatgcgt taccgctatg acggcaccgg gcgcgtgacg gagcagttta atccggcagg
    12481 cttaagctac acctatcagt atgagaaaaa ccgcatcacc atcaccgaca gcctgaaccg
    12541 gcgcgaggtg ctgcacacgg aaggtgaagc cgggctgaaa cgtgtggtga aaacggaact
    12601 cgcggatggc agcatcaccc gaagtaaatt tgactatatg gggcgactcc agtcacagac
    12661 ggatgcagca ggccggacaa cagaatacag tccgaatgtg gtgacgggac tcgtcacgtg
    12721 catcaccacg ccggacggca ggaaatcgga attttactat aacaatcaaa accagttaac
    12781 ctcagccacc gggcctgacg gactggaaat gcgccggaaa tatgatgagt acgggcgtct
    12841 cacgcaggaa accgcccaca acggcgatgt cacccgctac agttatgata atccacacag
    12901 tgaattaccc tctgcaactg aagatgcgac gggtagccgc aagcagatga cgtggagccg
    12961 ctacgggcag ttacagacct tcaccgactg ctcaggatat gaaacgcatt acgaatacga
    13021 ccgctttggt cagatgatgg cggtacaccg tgaggaaggc atcagcacgt acaataccta
    13081 taatccgcgc ggccagctgg tcagttggaa ggacacgcag ggccgtgaaa cgcagtatga
    13141 atacaacgct gcaggcgacc tgaccgccgt cattaccccg gacggcaacc ggagtgagac
    13201 actgtacgat gcgtggggaa aggccgtcag caccacacag ggtagtctga cgcgcagcat
    13261 ggaatacgat gcagcgggac gtgtcatcag cctgaccaac gagaacagta gccatacaga
    13321 atttagctgg gatgtgcttg accgcctgat acagcagcgc ggctttgacg ggcggacgca
    13381 gcgttaccgt tatgacctga ccgggaaact cacgcagagc gaggatgagg ggcttatcac
    13441 cctctggcac tacgacgaat cggaccgtat cacacaccgc acggtgaacg gcgaaccggc
    13501 agagcagtgg cggtataacg accacggctg gctgaaagaa atcagccacc tgagcgaagg
    13561 tcaccgggtg gcggtacatt acggctataa ccgtaaggga cgtctcacag gcgagcgcca
    13621 gacggtacat aacccggaga cgggggaact gctctggcag catgagacga aacacgctta
    13681 caacgagcag gggctggcaa accgctttca ggcagacagc ctgccgccag tggagtggct
    13741 gacctacggc agcggttacc tggcgggaat gaaactgggc gacacgccgc tggtggagta
    13801 cacacgggac agactgcacc gggaaacggt gcgcagcttc ggcaataacg catacgaact
    13861 gaccagcaca tacactcccg caggccagtt acagagtcag cacctgaaca gcctggtgta
    13921 tgaccgtgac tacggctgga atgacaatgg cgacctggtg cgcatcagcg gcccgcggca
    13981 gacgcgggaa tacggctaca gcgccacggg caggctggag agcatacgca cccttgcacc
    14041 ggacctggac atccgcatcc cgtatgcgac cgacccggcg ggaaaccgcc tgccggaccc
    14101 ggagctgcac ccggacagca ccctcacggc gtggccggat aaccgcatca ccaaagacgc
    14161 gcattacctg taccgttacg atgaatacgg caggctgacg gagaagacgg accgcatccc
    14221 gacgggtgtg atacggacgg acgacgagcg gacccaccac taccactacg acagccagca
    14281 ccggctggtg ttttacacgc ggatacagca tgaggagcca ctggtcgaga gccgctacct
    14341 ctacgacccg ctgggccgcc ggacggggaa acgggtgtgg cgtcgcgaac gtgacctgac
    14401 gggatggatg tcgctgtcgc gtaaaccgga ggtgacgtgg tacggatggg acggcgaccg
    14461 gctgacgacg gtacagaccg acaccacgcg tatccagacg gtataccagc cggggagctt
    14521 cgcgccgctc atccgcatcg agacagagaa cggcgaactg gataaagcgc agcggcgaag
    14581 cctggtggag aagttacagc aggaagggag tgaggacggt cacggtgtgg tgttcccggt
    14641 ggaactggtg aggatgctgg acaggctgga gggggaaatc cgggcaaact gcgtgagcag
    14701 tgaaagccgc cagtggcttg cacagtgcgg gctgacggtg gaacaactgg ccagacaggt
    14761 ggagccggaa tacacaccag cgcgaaaagt tcacctttac cactgcgacc accggggact
    14821 gccgctggcg ctcatcagcg aagacggcaa tacgatgtgg agcgcggagt atgatgagtg
    14881 gggaaacctg ttgaatgagg agaacccgca tcacctgtac cagccgtacc gcctgccggg
    14941 gcagcagtac gatgatgaat cggggctgtg ctataaccgt aaccggtact acgatccgtt
    15001 gcagggacgg tatatcaccc aggatccaat cgggctgagt ggcgggtgga atttatacca
    15061 atatcctctc aatccggttc ataaagtaga tcctttaggg ttatcagcat gggatgatgc
    15121 aaaatctggt gcgtgtcatg aaggaatttg ccgactgttt tctgttttca ttggcccgga
    15181 taaattcgat agcaccgatg atgcggcatt cgaagcatta aaaaaaataa atggacattc
    15241 aatatgccaa ggtgttgaac atgcaggctt agtgtgtaag gataaaaata ataaatattt
    15301 ctatacgcca cctaaacagg gaaatgtgaa tacatcttat ccttttgaaa gtccatgtcc
    15361 taatggaaca gaaacagttg ctatgtacca tacacacggt tcagatagta atggagtgta
    15421 tggagatgaa gttttttctc cggctgacaa ggaattatct aaaaataaag gtatttcgag
    15481 ttaccttggt acacctaaag gttcattcca gaaagtagaa ccaaatggtg atcagccaat
    15541 gaataaatct ggtttaccaa gtcagtgtag agtacatgca aatggagaaa tatattgatg
    15601 aaagttatga ttatattaat gttatcaata cttccattgt taccaagttt ttctcatggt
    15661 gaatcggcgg aatgttccct tgaaaactca gacagtaaga gtaattattt cgttggaaat
    15721 aaggaattag taggtaaatt agcagaaata tatgtagagg accgctatgg caaagataat
    15781 gccatgcgag agaaacctta tcatattagc gataaaggta acttttggca ggtaagtgga
    15841 aacatagacc ctaatgcaac gggaggtgtt tttgtaataa aaatagataa ggtaaacggg
    15901 agaatcatat catttactca tgggaaatga tttttttgtg cacagaaatg atcaggccat
    15961 agcacatgtc ctgatcaaaa ataacccacg ttaaacgctg ataaaattag ttatgcagca
    16021 tcagacgcga tattttttcc agaagagatg tctgactgac ttcattatag cgtgtggtat
    16081 cgtaagttaa agttcgcaac aataattcag ttgctggttg cgccatcaca tcagcctctt
    16141 taccgtcaaa tgttgtcgcc accagattat aaactaaggt tgctctgtcc ataatctggt
    16201 tgggctggtt acttttagta caaaaaagta atgcttcatt acctcgtttt tcaataaaga
    16261 gttgttgata ctggctgaca gcatgacttt taggttttgg cgttaaatag taaggcaaac
    16321 atgttttatc cgctgcacca aatttattaa ttttatcatg attatcttct gctacctgaa
    16381 gagaacaacg ctctgcagaa cctaataatc tcggaatacg aacagtattg tatcgcttaa
    16441 tcacaacctg atttattgta tcaacaagat agaaattatc atcacgcaat ttatcaatac
    16501 agttgatatt catccctgga acattattac ggaaatcgtt ctcatcggta tacattttcg
    16561 gctctgcgat gttcattacg ccatggctga atactaccgg catagcaacg ccataaaaat
    16621 cattccctct tctgtttccg gaagaggaac accgaattga gacaagaata tactcaccat
    16681 cgttaatgct agtttctttc tcaccagcac agcttctttt agccagagtt cgctgcgaat
    16741 catttccaac ttagcgacag acacaggatt aagaactttt ttaaccacca ggataacagg
    16801 atctttttta ttcttctcta tggcttcaat attacatccc tgaaaaactc gctgatgatt
    16861 tttttcaaag ataaaatcta cttttagcct tgaataataa tctaacagac cttttttacc
    16921 cgcttttgcc tcattcagtg cctgccaggt agagtttaaa aaggtatctt caccaaggga
    16981 aatgctggac ccatttattt ttttagactg attcagtacc agatagttaa catctttatc
    17041 aagatcaata agttcccgag gtgaaattat atctactgca tctaattctt ttttcagata
    17101 gtgaataaat cgttggtgcg cttctggttc ttcgccatta tcaagattgt ctataataac
    17161 taacgggcgc tgaagtgttt tgatattggt cgttaaaaag tctaactgac tgtgggttgc
    17221 acaaaaaaca cgtggtgaaa aagcgatgtc agcctgagac agtatatcac caagcacgtt
    17281 ctgaaccaga ttttctgcat gatttttgca cccagaataa gctttactgg caaaacgcat
    17341 atagggcatt ttccggtatt ttctaccatc tactttctca agcaactgca atgatttttt
    17401 gcccttaatc agaatccgac cataatcgct gagtacacca agctcttccg ctttagctct
    17461 gaagcagatc cctttcaggg taaaagtgag gtcgccataa tccgggctgt aaaagagatc
    17521 actttgcaat gcatcgacgt aatagtttcc tcttttgtct ggctcttctt tttgtacgac
    17581 ggcacccaga aaaatttcgc tattataggc cccatgactc acctcaaaat acttcccggc
    17641 attatctaaa aaatgtagtt tcagacgcag tccgagcaca gtttgagcaa ttttatattg
    17701 atcaaagcct tttattttga gttcattaac ccattgatga tacgggcgag catcaggtga
    17761 cagaaacatc acaagatagc tgtttgcttt tcttaacgtt tgatactgga actccctgtt
    17821 attcttcgtt cccaatttta acgataatat attttgaatt tctctgtgca attcaataaa
    17881 aaaatcatcc catttcatgg agtattcttt taccttggtg atacagatag catcaattcc
    17941 ccaaccattt gtcgagggta attgtaaaag tttttccaac attacatctg cagtatcatg
    18001 gatatcaaag agctgtgttc gtgctttagg tgcataatct ggaggctgaa gcccccattc
    18061 ggcagccatc acaacatccg tttcgttatg ctgttgactt tcagttatat cagtcataat
    18121 tcgctcctaa aagattaagt aagtattgat ttactcttaa ttctgatttt atttttgcat
    18181 cataaggatt tttgccatta tctttttcat aagatgaaat atttttaaaa aggttataat
    18241 aacagacgcc cttatggtta gaatgttcgg cacgaatgtt gaggctgttt aaagcatatc
    18301 gagtattaag ataaacaaca tcaacaccat caaactgtgt ttttgctgta acgattttct
    18361 gcaactcact gactttcccc aatgagttat tatgcatttt tttcgctaat tgtcggttat
    18421 ttccttgcat tcgccagttt tttacatcga ttgcaacaat ccggttcttg ttaatgcaat
    18481 acacatcaaa caactcataa caagagctat ccagatagta cgatagctct tgtggtggga
    18541 tcagcgtaat attcatttcc tggagaatca ggtgtaattg ccattcacca atattgccaa
    18601 tcaaaagtgg caacaatgaa ggaatgggga tgtattgttg taaaggcgtg gcatctaatc
    18661 ccagaatctt cgcaaaaata cgctgttcag ttccggatga ctcttcagcc atagcttcat
    18721 gatattggg
//
LOCUS       DAJVTL010000089        18555 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.090, whole genome shotgun sequence.
ACCESSION   DAJVTL010000089 DAJVTL010000000
VERSION     DAJVTL010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18555
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.090"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(32..2479)
                     /gene="glgP"
                     /locus_tag="OQQ26_002905"
     CDS             complement(32..2479)
                     /gene="glgP"
                     /locus_tag="OQQ26_002905"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HCS1858291.1"
                     /translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
                     EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
                     IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPELMRL
                     LIDEHQFSWDDAFGVCCEVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
                     FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
                     DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
                     TIKEYADHIWHIDPVRL"
     gene            complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="OQQ26_002906"
     CDS             complement(2498..3931)
                     /gene="glgA"
                     /locus_tag="OQQ26_002906"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HCS1858292.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
                     PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
                     YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
                     HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
                     ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
                     KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
                     QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
                     PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRF
                     VQRQAMAMDFSWQVAAKSYRELYYRLK"
     gene            complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="OQQ26_002907"
     CDS             complement(3931..5226)
                     /gene="glgC"
                     /locus_tag="OQQ26_002907"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HCS1858293.1"
                     /translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
                     DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
                     VGTLEAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
     gene            complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="OQQ26_002908"
     CDS             complement(5244..7217)
                     /gene="glgX"
                     /locus_tag="OQQ26_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HCS1858294.1"
                     /translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
                     HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
                     EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKG
                     LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
                     WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
                     FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
                     FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
                     NDHFRDVARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
                     VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
                     NSWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
                     GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
     gene            complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="OQQ26_002909"
     CDS             complement(7214..9400)
                     /gene="glgB"
                     /locus_tag="OQQ26_002909"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HCS1858295.1"
                     /translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
                     DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
                     LICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
                     DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
                     WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
                     SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGMLYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDVSLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
                     GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
                     SMHYHGSNAGNGGTVHSDEIASHGRHHSLSLTLPPLATIWLVREAE"
     gene            complement(9673..10776)
                     /gene="asd"
                     /locus_tag="OQQ26_002910"
     CDS             complement(9673..10776)
                     /gene="asd"
                     /locus_tag="OQQ26_002910"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HCS1858296.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
                     PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
                     MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
                     YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
                     GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
                     AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
                     LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            10968..11561
                     /gene="yhgN"
                     /locus_tag="OQQ26_002911"
     CDS             10968..11561
                     /gene="yhgN"
                     /locus_tag="OQQ26_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YhgN"
                     /protein_id="HCS1858297.1"
                     /translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
                     LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
                     EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
                     RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
     gene            complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="OQQ26_002912"
     CDS             complement(11618..12958)
                     /gene="gntU"
                     /locus_tag="OQQ26_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HCS1858298.1"
                     /translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH
                     YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
                     GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTDYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="OQQ26_002913"
     CDS             complement(12962..13489)
                     /gene="gntK"
                     /locus_tag="OQQ26_002913"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417894.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HCS1858299.1"
                     /translation="MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHP
                     RRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIGCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
                     EGVVASTIEVIKKGK"
     gene            complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="OQQ26_002914"
     CDS             complement(13628..14623)
                     /gene="gntR"
                     /locus_tag="OQQ26_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HCS1858300.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTTAIIARGHRHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVE
                     QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
     gene            complement(14847..15542)
                     /gene="yhhW"
                     /locus_tag="OQQ26_002915"
     CDS             complement(14847..15542)
                     /gene="yhhW"
                     /locus_tag="OQQ26_002915"
                     /EC_number="1.13.11.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004213399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quercetin 2,3-dioxygenase"
                     /protein_id="HCS1858301.1"
                     /translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
                     DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
                     EYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            complement(15665..16702)
                     /locus_tag="OQQ26_002916"
     CDS             complement(15665..16702)
                     /locus_tag="OQQ26_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCS1858302.1"
                     /translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
                     APIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTSTL
                     AQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
                     LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGV
                     LEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITNGAPNYVKESEVLTNLEILERGFE
                     QASPSTVTLAK"
     gene            17035..17523
                     /gene="yhhY"
                     /locus_tag="OQQ26_002917"
     CDS             17035..17523
                     /gene="yhhY"
                     /locus_tag="OQQ26_002917"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1858303.1"
                     /translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
                     LADRPGIKQLVACIDGTVVGHLTIDVQQRLRRSHVADFGICVDSRWKNRGVASALMRE
                     MIEMCNNWLRVDRIELTVFVDNAQAIKVYKKFGFEIEGTGKKYALRNGEYVDAYYMAR
                     VK"
     gene            17759..18555
                     /locus_tag="OQQ26_002918"
                     /pseudo
     CDS             17759..18555
                     /locus_tag="OQQ26_002918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417899.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT         4682 a         4946 c         4567 g         4360 t
ORIGIN      
        1 ccctttggcc ccgttctatt tattagtgaa attacaatct caccggatcg atatgccaga
       61 tatgatcggc gtactctttg atagtacggt cagaagagaa gtagcccata ttggcaatgt
      121 tcagcatcgc ttttgcagtc cactcttcct gaagctcgta gagttcgtcg actttatcct
      181 gacaatcgac atagctgcga taatccgcca gaacctgata gtgatcgccg aagttgatca
      241 gcgaatcaac cagatcgcga tagcgacccg gatcttccgg actgaataca ccgctgccga
      301 tttgcgtcag cacctgatgc agctcctcat ctttctcgta gtattcacgc ggtttgtagc
      361 cctgacgacg cagttcttcc acttcttccg cagtgttacc aaagataaag atattgtcag
      421 caccgacatg atccagcatc tcgacgttcg caccgtccag cgtaccgata gtcagcgcgc
      481 cgttaagcgc aaacttcatg ttactggtgc cggaagcttc cgtccccgcc agcgaaatct
      541 gttcagacag atcggccgcc ggaatgatca actgcgccag gctaacgctg tagttcggga
      601 tgaacacgac tttcagcttg tcgccaatct gcggatcgtt gttgatcact ttcgctacgt
      661 cattgatcaa atggataata tgcttcgcca tgtaataggc cgaagccgcc ttaccgccaa
      721 aaatattcac gcgcggtacc cacttcgcat ccgggtcggc cttgatgcgg ttatagcggg
      781 taatcacatg caacacattc atcaattgac gtttgtattc gtgaatacgt ttgatttgca
      841 catcgaacag cgctttcgga tttaccacca cattcagctg ctgggcgata tactccgcca
      901 gacgcttttt gttctccagc ttcgcctgat gcacagcgtg attaaccatt gggaaatcac
      961 agtgttgttg cagctcatta agcaggctaa ggtcggtgcg ccagttacgg cccaggtgtt
     1021 cgtccagcac ggctgaaagc gatgggttcg caaccgccag ccagcgacgc ggcgtcacac
     1081 cgttggtgac gttggtgaaa cgacccggga agattttcgc aaagtcggca aacaacgatt
     1141 gcaccatcag gttagagtgc agttccgata caccgttaac tttgtggctc accacaaccg
     1201 ccagccaggc catacgcaca cgacgaccgt tggattcatc aatgatcgac gcccgtccca
     1261 gcagatcggt atcattcgga tactgttcct gcaaggtttt caggaaatag tcattgattt
     1321 caaagatgat ctgcaggtga cgtggcagaa ttttacccag catatcaacc ggccaggttt
     1381 ccagcgcctc gctcatcagc gtgtggttgg tgtaagagaa aacctcgcaa cagaccccaa
     1441 acgcgtcgtc ccaactaaat tggtgctcat caatcagcag gcgcatcaac tcaggaatcg
     1501 acagcaccgg atgggtatcg ttgagatgaa tcgcgatttt atccgccagg ttatcgtagg
     1561 ttttatgcaa ctgataatgg cggcttaaaa tgtcctgaat ggtcgaggaa accaggaagt
     1621 attcctgacg caggcgcagc tcacgcccgg agtaggtgga gtcatccgga tacagtacgc
     1681 gagatacgtt ctcggagtgg tttttatctt ccactgccgc gaagtagtca ccctggttga
     1741 atttaccgag gttaatttcg ctactggctt gcgcactcca caaacgcagc gtgttggtcg
     1801 cgtcggtgtc gtaaccaggg attatctgat cgtaagcgac tcccagaatc tcttcggttt
     1861 caatccagcg cgttttttta ccttcctgct gaatgcgacc gccaaaacgg actttatagc
     1921 gcgtgttgtg gcgtttgaat tcccacgggt taccgtattc cagccagtag tctggcgact
     1981 ctttctggct accgttaacg atgttctgct tgaacatacc gtagtcatag cggatgccgt
     2041 aaccgcgccc cggcaaccct aacgtcgcca gagaatcgag gaagcaagcc gccagacgtc
     2101 ccaggccacc gttaccgagg cccgggtcat tttcttcatc aatcagctct tcgagattta
     2161 accccatcgc ttccagtgcg ccctgtacat cttcgtaaat tcctagcgac aacatggcgt
     2221 tggagagcgt acggccaatc aaaaactcca tcgacaggta gtaaacctga cgagtttctt
     2281 gcgacaactg ggcacggttt gaacgtaacc agcgctccac gagacgatcg cgcacagcaa
     2341 ataacgttgc gttcagccat tcatgtttat tggcgacgac cgggtccttt ccaatcgtaa
     2401 acatcagctt gtaagcgata gagtgcttaa gagcttctac gctaagcgtg ggcgatgaat
     2461 atgtaaacgg agcattcata taggcgtttc ctgaaaacta tttcaagcga tagtaaagct
     2521 cacggtacga cttcgccgcg acctgccagc taaaatccat tgccatagcc tgacgttgca
     2581 caaaccgcca cagtgaagga cgggaccaca gtacaaaagc acgccgaata gcccgtaaca
     2641 gcgaccaggc attactatct tcaaagacaa acccactggc gacgccatct gcaaggttct
     2701 caagagaaca gtcagacacc gtatcagcaa gcccaccggt gcgccgcact aacggcagcg
     2761 taccgtactt caatccataa agttgcgtta agccgcacgg ttcaaaacgg ctgggcacca
     2821 gaatgacgtc cgcgccgccc ataatgcgat gcgaaaatgc ttcgtgatag ccaatctgaa
     2881 cgcccacctg accggggtat tccgctgccg ccgcaaggaa accttcctgc agcaccggat
     2941 cgcccgcgcc gagtagcgcc agctgcccgc cctgctccag aagacccggt aaggcttcca
     3001 gcaccaggtc gagacctttc tggctggtca gacggctcac cactgcaaaa agcggcactt
     3061 tatcgtcaac cttaagcccc attgcgattt gtaactggcg cttattttcc gctttatctt
     3121 ccaacgtatc gcgggtgtaa cgcgaggcca acagtaagtc cgtctctgga ctccagattt
     3181 tctcgtccac gccgttcagt acgccggaaa gacgcccttc acggtgacgc tgttgcaaca
     3241 gaccttccat accgtaggca aactgcggtt cggtgatctc gcgagcgtag gttggactga
     3301 ccgccgtaat gtgatcggca tagtacagac cggccttcag gaaagagatt tgtccgttga
     3361 attccagccc atgaatatta aagaatgacc atggcaattg gatgtcattc atgtgatgtg
     3421 cataaaacat gccttgatag gccaagttgt gcacagtaaa caccgacttc gccggacgcc
     3481 cgcgcgccgc cagatacgca ggcgcaaggc ctgcatgcca gtcgtgcgca tgcaccacat
     3541 caggacgcca gaatgggtca agcccgctgg ccatttctgc cccaacccac cccagcagcg
     3601 caaaacgcaa tacgttgtcg gtataggcaa ataagttggt atcgtgatac gggcttcccg
     3661 gacgatcata gagatgcggc gcgtcaatca ggtatatgcc aaccccgttg taatgaccga
     3721 acaacagcgt gatatgtccg gcgaaggtat cacgacggga tactacctgc gcatcggtca
     3781 cgccacggcg aatatcggga aatgcaggca acagtacgcg agcgtcaacg ccgtctgcga
     3841 tttgtgctgc gggtaatgcc ccaataacat cagccagacc gccggtttta agcagcggga
     3901 acatctctga acatacatgt aaaacctgca ttatcgctcc tgtttatgcc ctaacttccg
     3961 tagcatttcg cgcgttacca gcacgatgcc ttcttctgaa cgatagaaac gacgtgcatc
     4021 ttcctctgcg ttttcaccaa tcaccatgcc ttccgggata acacaagcac gatcgatgac
     4081 gcagcggcgc agacggcacg agcgacctac ccatacttcc ggtaacaata cggcggaatc
     4141 aatgttgcag aatgaattca cgcgaacgcg cgagaacaga acggactgca ccaccaccga
     4201 accggagatc acacaaccgc cggataccag tgagttaagg gtcatcccgt ggctaccgga
     4261 gcgatcctgc acgaatttcg ctggcggtaa tgattcattg taggtgcgaa ttggccaatt
     4321 gcgatcgtac atatccagtt ccggcaccac agaggccaga tcgaggttcg ctttccagta
     4381 agcttccagc gtacccacat cgcgccagta cggctcggca tccgggtcgg attgtacgca
     4441 agagagcggg aacgggtgcg cataggccag accggcttcg gtgatcttgg gaatcaaatc
     4501 tttgccaaag tcgtggctgg agttctcatc acgatcgtct tcttccagca gttcatacag
     4561 atagtcggcg tcaaagacgt agatacccat actcgccaga gatttgctcg gatcgttcgg
     4621 cattgacggt gggttagcag gtttttcaac gaattcgata attttatcgt tctcatcaac
     4681 cgccataacg ccaaatgcgg aggcttcttc aatcggtact ggcatacaag caacggtgca
     4741 acgtgcgcct ttttcgacgt gatcgataag catacgcgag tagtcttgct tgtagatatg
     4801 gtcgcccgcc aggatcacca cgtattccgc tttataacgg cggataatgt cgaggttttg
     4861 ggtgaccgca tctgcggtgc cgcgatacca gttttcccct ttcattctct gctgtgctgg
     4921 cagcagatcg acaaactcgt tcatttcttc attgaagaat gaccagccgc gctgaatgtg
     4981 ctgcaccaga gtgtgggact ggtactgggt gatcacgccc atacgacgga tcccagagtt
     5041 gatgcagtta gacagcgcaa agtcaataat gcggaactta ccgccgaagt gtacggccgg
     5101 ttttgctcgc ttattggtta aatccttcag gcgggtacca cgtcctcccg ccagtatcag
     5161 ggcaacagat ttcaatggca gctggcgcgc caacattaag tgatcgttct tctctaaact
     5221 aaccatgact aactcctttt ttatcatctc tggaacacac acaatccgtg tgcaggtccc
     5281 tgccagacag ccgtaatcac tgggttatcc tctccagcga atgggggaat ggcgtgccac
     5341 tccccagcag gtaaaacaat ctctgttacc tcaagcgtgg cgttaattgc gatcaaaaag
     5401 cgatccgaga gcagaatttg cagctgtttc ggcccgtttt gccactcatc cgtgcttaaa
     5461 ggttgagcat atcgatttag ccaacggaca ttgccgtcgc cttcttccca ccagctattc
     5521 tccaccaaag cgggaatgcg cttgcgcaga tggattaacg cggcggtaaa tgcggttaaa
     5581 ccactgcttg cctgcgacca gtccaaccaa gttaattggt tatcctgaca gtaggcattg
     5641 ttattgccat gctggctgtg accatgttcg tcaccggcca gtaacatcgg cgtaccctgg
     5701 gagagcaaca acgttgttaa cagggcgtga atgctgtcgc gccgccgttc aaccaggtca
     5761 agagaaccgc ctaacccttc tttaccatga ttgttactgt aattgttgtt ggtcccgtcg
     5821 cgattttctt ctccgtttgc ttcattgtgt ttatggttga agcaaacgca gtcgcgaagc
     5881 gtaaaaccgt catgcgcggt gacgagatta atcgcggcac tcggcagacg accattacgt
     5941 ttaaaaacat cgctggaggc agcaaaacgc ccggcaaacg cccccagagg caaatcataa
     6001 tgtagccaga aacgacgggc aacatcgcgg aaatgatcgt tccactcggc aaacagcggc
     6061 gggaaatttc ccacctgata accaccagga gcgatatccc acggttcagc aattaacttc
     6121 acctgcgaga gcaccgggca gttctggata gcggtaaaca acggcgcatc ctgacggaac
     6181 tctggcgtac ggcccatgac tgccgccaga tcaaagcgga aaccatcgac gtggcaggtt
     6241 tctacccaat aacgcaggca ggcgctggca taatccacca ccgccggatg actcaaattg
     6301 agcgtgttgc cgcaaccggt ccagttgtga taatcgccgt cttctcttat ccaataatag
     6361 ctacggttat cgatcccacg cagcgagaat aacgggccgt cgaggtccag ttccgcacta
     6421 tggttgagca cgatatcaag aatgacttcg atacccgctt tatgcagtgc tttgattgca
     6481 tcgcgaaact catccagcgc cgtttctggc gagcaggcat acgccggatg cagcgcaaac
     6541 atcgccaccg ggttgtaacc ccagtagtta cttagcccca tgcgttgcag acgtggttca
     6601 ctggcaaact gcgccactgg cagcagttcc agcgcggtaa tgcccaattg tttcaaatag
     6661 ttgatcatca ccggatgccc gagggcttta taagtgccac ggatctcgac cgggatctcc
     6721 gggtgcaagt acgttaatcc tttgacatgg gcttcataaa tgatggtgct gccccacggc
     6781 gtgcgcggcg gggcatcatc ttcccagtca tagtgatcaa ccaccactac gcatttcggc
     6841 gcaatggcgg cgttgtcgcg atagtcaggt tcattatgac cggcgtgcag cagcgggtta
     6901 tctttaaact ccccgtcaat ttgccgcgcg caaggatcaa tcaacaactt cgccgggtta
     6961 aagcgatgcc cctcggcggg ttgccagggg ccatgaacgc gataaccata acgcaaaccc
     7021 gggcgcgcat ccggcagata accgtgccaa atgtcgccac tgtgccctgg caagtcatag
     7081 cgatgttcct ggccattggc gtcaaagaca cacagctcta cccgctcggc atgagcggag
     7141 aaaagtgtga agttgacgcc ctgaccgtcg taatgcgcgc cgaggggagc gggtttgcca
     7201 atggcgagtt gtgtcattct gcctcccgaa ccagccagat agtggccagc ggtggtagtg
     7261 tcaggcttag tgaatggtga cgaccgtggc tggcaatctc atcgctgtgt accgtgccgc
     7321 cattgcctgc attactgccg tgatagtgca tggaatcggt attgaggatt tcacgccatt
     7381 tgcctggctg gtttatgccg aagcgataat catgacgcgg caccggtgta aagttgctgg
     7441 caacgatgat ttcgttaccc tctttatcgc gacgcacaaa gatcagcacc gagcgttctt
     7501 tatcatccac caccagccat tcaaagccgt acgggtcaaa atccagttca tgcatcgctt
     7561 tatggtggcg gtaggtgagg ttcagatcgc gcaccagacg ctggacaccg tggtgccagt
     7621 tatcgccgcc ttccaacaga tgccagtcga ggctgacgtc atggttccac tcgcggccct
     7681 gggcaaattc gttccccatg aacagcagtt tcttgcctgg gaatgcccac atccagccat
     7741 agtaggcgcg caggttcgcg aatttctgcc atgcgtcgcc cggcatccgg tcgagaatcg
     7801 attttttacc gtggaccact tcatcatgcg acaacggcag gacgaagttt tcagtgtagt
     7861 tgtagagcat cccgaaggtg agtttatcgt gatgatactg acgataaacc gggtcgagct
     7921 tcatgtagtc cagggtgtca tgcatccagc caaggttcca cttgtaccag aagcccagac
     7981 cgcccatatc ctgcggacga gaaacgccag ggaaatcggt agactcctca gccattgtca
     8041 ccgcaccgga aacctgctca ccaagaatac ggttggtatt acgcaagaat tcaatcgctt
     8101 caagattctc gcgcccgcca aattcgttcg ggatccactc cccctcttta cggctgtagt
     8161 cgcgataaat cattgacgcc accgcatcga cgcgcagcgc atcaatacca aaacgttcaa
     8221 tccagtaaag cgcgttaccg acaaggaagt tactgacttc acggcgacca tagttgtaga
     8281 tcagcgtgtt ccagtcctga tgatagcctt cgcgcggatc gctgtgttca tacaagttcg
     8341 tgccatcaaa ttcggcaagc gcaaagtcat cggtcgggaa gtggcctggc acccagtcga
     8401 gaatcacgtt cagaccagct gcgtgtgcgg catcaatgaa ataacggaag tcgtcgcgag
     8461 taccaaaacg gcgggttggt gcatacaggc cggttggctg ataaccccaa ctgccatcga
     8521 agggatgctc gttaatgggc agtagttcga ggtgggtaaa gcccatccat ttagcataag
     8581 gcaccagttg atcggccagc tcgcggtagc tcaaccagaa attgttgtcg gtgtggcgac
     8641 gccaggagcc caggtgaact tcataaatag agattggcgc atcaaactga ttcgcttttt
     8701 tgcgctcttc agtctgtaca accttttccg gcagcccgca aataagagac gcggtttccg
     8761 ggcgcatttg cgcttcgaag gcataagggt cggacttcag acgcaagttg ccattggcat
     8821 caatcatctc gtatttatag agctgaccgt tatgcgcccc agggataaac agttcccaga
     8881 tgccgctctc tttacgcagg cgcatcggat gacggcgacc gtcccagtag ttgaattgcc
     8941 caaccaccga gacccgacgg gcgtttggag cccagacaga aaaacgcgta cctgtgacgc
     9001 catccatagt atctgcatgc gcacctaagg tttcatacgg gcgcaggtga gtaccttcag
     9061 ataatagcca agcatccatt tcctggatta gcggaccaaa acggtaagga tcatcaatca
     9121 ggttttgctg accatgccag actacagcca actgatagcg gaaaaaattc ttacgtcgcg
     9181 gaatgacgcc gctaaagaat cctcgtgagt cgagacactc cagttttgcg agtttgcgcc
     9241 cggttttcgg ttcaatcacc cacacatcgg tagcgtcggg taaaagggca cggacttcca
     9301 gtcccgcggt ggttttatgc attcccagta cggaaaaagg atccgcaaaa tggcctgcaa
     9361 ttagcgcgtt aatcacgtct ctatcgatac gatcggacat gcttgtcttc ctgttttatt
     9421 gtgtcacccc atccaattgg atttttgact tctggttgtg acattttttt gacctgaacg
     9481 gcgcagcact ctgtgcatac tctctgcgtc gtcctcactt caggtaaggc tgtgaatact
     9541 catgtattca gccaccctta aagaatagcc aatgctctat ttaactcccg gtaaatcatg
     9601 aaacatctgc gcttactcct gtattacgca ctaacagggg cggcatcgcg ccccagattt
     9661 aatgaataaa gattacgcca gttgacgaag catccgacgc agcggctccg cggcccccca
     9721 cagcagctgg tcgcccacgg taaaggctga caggaactct ggtcccatat tcagcttacg
     9781 caggcgacct accggcgtgg tcagcgtgcc ggtaacggca gctggggtta gctcacgcat
     9841 agtgatttcc cgatcgttcg gaacgacttt cgcccacgga ttgtgcgcag ccagcagttc
     9901 ttcgacggtc ggaatagaca catctttttt caatttaata gtgaatgcct ggctgtggca
     9961 gcgcaatgcc ccgacacgca cacataaacc atctaccgga attacggaag atgtgttgag
    10021 gatcttgttg gtttccgcct gccctttcca ctcttcgcgg ctctgaccgt tatcgagctg
    10081 tttgtcgatc cacggaatca ggctacccgc cagcggcacg ccaaagttat ccaccggcag
    10141 ctcaccgcta cgggttaagg ttgtgacttt gcgttcgata tcgagaatag cagaggacgg
    10201 ggtcgcgagt tcatctgcta catggccata cagatggccc atctgggtta ataactcacg
    10261 catatgtcgc gcaccaccgc cggaagcggc ctggtaggtt gcaacggaca cccaatcaac
    10321 aagatcattg gcgaataaac cacccaacga catcaacatc aggcttacgg tacagttacc
    10381 gccaacaaaa gtcctgatgc cattatttaa tccgtcggta atgacgtcct gattgacggg
    10441 gtcaagaatg atgatggcgt catctttcat gcgcagagac gatgctgcgt caatccagta
    10501 accctgccat ccgctttcac gaagctttgg atagatttcg ttggtataat cgccgccctg
    10561 acaggtcaca atgatatcga gggcctttag cgcctccaga tcaaaggcat cctgaagtgt
    10621 gccagtggtt ccgccaaaag acggcgcagc ctgaccaagc tgagaagtag aaaagaagac
    10681 agggcgaatg gcgtcgaagt cgcgctcttc aaccatgcgt tgcatgagaa cggagccgac
    10741 cataccgcgc cagccgataa aaccaacatt tttcataagc gttttttcct acaaagatgt
    10801 gtgctgtata aatgtgccgg tctcctcttg gcacatcttt caccatacaa aaagcagcca
    10861 aagtcgcaag tgaaattaat caatgatagc gaagccatca gtaatgcgac ttatcctgct
    10921 ttgttagcac gcagaaagtc cgcggcaatt atcagggaat tggagttatg aatgaaatca
    10981 tttctgcagc agttttattg atcctgatta tggatccgct cggaaaccta cctattttca
    11041 tgtccgtact gaaacatact gaaccgaaaa gacggcgggc aatcatggtg cgagagttgc
    11101 ttattgctct cctggtgatg ctggtgttcc tgtttgcggg tgagaaaatt ctggcatttc
    11161 tcagcctgcg agcagaaacc gtctccattt ctggcggcat cattctgttt ctaattgcca
    11221 ttaagatgat tttccccagc gcttcaggaa atagcagcgg gcttccggca ggtgaagagc
    11281 catttatcgt gccgttggca attccgttag tcgccgggcc gactattctc gccacgctga
    11341 tgttgctgtc tcaccagtac ccaaatcaga tgggacatct ggtgattgct ctgctgctgg
    11401 cctggggcgg cacctttgtc atcctgctac agtcttcgct atttttacgt ctgctgggcg
    11461 agaaaggggt gaacgcactt gaacgcctga tgggattgat tctggtgatg atggcaaccc
    11521 agatgttcct cgacggcatt cgaatgtgga tgaaggggta acgaggagag tttttcgaaa
    11581 agagcccggt agcgtcacaa ctaccgggcg aacaaactta actcaacagc tggaacgcaa
    11641 tcatcccaac gatggcacca acagtgccga ggatggtttc catcatggtc caagttttca
    11701 gcgtttcggc ttcggtcgcg ccggtaaatt taccgaacaa ccagaaaccg gcgtcgttaa
    11761 cgtggctgac aacaatcgaa ccaccggcga tacaaatcga cagcgccgcc atttgcgcac
    11821 cagagtagtt cagttgttca atgactggca tcaccagtcc caccgccgtt aaacaggcta
    11881 cggtggcaga cccctgaatg atgcgcactg cagctgccag cacgaagcag gtgatagcaa
    11941 tcggcaggcc catgccggtt aacgcttcgc ccagtgccgg acctacgcca gagtcaacca
    12001 gcacctgttt gaacacgccg cccgcaccaa tcaccagcag aatgatcccc gccggttgca
    12061 gcgcgtgacc gcaaatctcc atcactttgt cttttggcat gccctgacgc attgccaggc
    12121 cataaatcgc taccagacaa gcaaccagaa tcgcggtaaa cggatgacca ataaactcga
    12181 accattcgta atcggtagag ccttccggca caaaacgcgc ggcaatggtt ttcagcccta
    12241 ccagcaccag cggcagcagg atcagcgaca ggctgaatcc gaaggacggc attttgcctt
    12301 cgccgagatg cggctcgctg atgtcgtcag gaatatgcaa ctccacgtag cggctgatga
    12361 aattacccca cagcggcccg gcaataatca ttcccggaat tgccgcacaa aggccaatca
    12421 ggatcatcca gccaaaatcg gcgttcatct gcgatgccag cagcattggc gctggtccag
    12481 gcaccaggaa cgcagccgct gccgccacgc ctgcgaataa tgggattacc agcttcacca
    12541 ggttcgtacc ggtgtggcgc gccattgaga aagcaacgct aatcagcaga acaatcgcca
    12601 cttcaaagaa cagcggtagc gcacagacca gccccgcaag gccgatggca taatgcgcgc
    12661 ggctgtgacc gaaggatttg agcattttga cggcaatctg atcgactgcg ccggtttcat
    12721 gtaagatctt gccaaacata gctcccaggg cgacaaccac cgccaggaag ccgagggtgc
    12781 ctcccatccc tttttccatc gtcgctgcga ttttatcgag cggcataccg gaaaaaaggc
    12841 cagcccccat ggacaccacc atcaaagcca ggaaagcgtg catacgcgcc ttcatgacta
    12901 aaaacagcag cagtaaaaca gaccctactg ctgttaaaac aagcgttaat gtagtcacta
    12961 cttatttgcc ttttttaata acctcaatgg tgcttgccac aacaccttcc agcggttgat
    13021 cgatatccac caccagtaca tcggtttcgt ccgcacccgg ctcctgcagc gtttcaaact
    13081 gcgtcaccaa catttgggtt ttaaagaaat ggcctttgcg cgctttcagg cggctttcaa
    13141 tcacatcaaa atcgcctttc aggtagatga aagagagatt cggattacct tcacgcagca
    13201 agtcgcgata gtgttttttc aatgcagaac agccgatcag tgacacttta ttagtgcgct
    13261 gcatagcaaa cgcggcgtcg ttcagcgcct gcaaccaggg tttgcgatcg tcgtcattca
    13321 gcggttcgcc agacgccatt ttttcgatat tgcgccgtgg atggaggaaa tcgccatcaa
    13381 gaaacgcggc atgaagttga tgcgccactt cactggcgac cgcagatttg ccgctgcccg
    13441 atacgcccat caagacgtaa atgtggtgat catggttagt cgtactcaaa gtggtgcccc
    13501 cacaatacaa gaattaagaa tgttacgggt aactgttatc ggtaacattg tccagccgga
    13561 caatatcaga agcaatatcc atccatgcct taagtgtata agtgtgagct acttcaaatt
    13621 tgtgggctta aatagatccg cccggtgaca aggtgaaacc taaatctaac attttcggtg
    13681 tcacagattc gccacgaata cgcgccagca ggcgttcagc gccaatactg cccatccgct
    13741 cacgcggcgt cagcacgctc gcaagtcgtg gctccatcac ctgaccaatg tcatgaccgt
    13801 ggaaaccggc aatcgccata tcgtcaggaa cttttaaccc cagacgctga cattcaaacg
    13861 ccgcgccgac cgccaggtca tcattagtac agaacacgcc atccagctgc ggatattctc
    13921 gccgcgcctg gcgaattagt tcaataccgg aagagtaaga agaagattgc tcaaccatca
    13981 cgctatacgg caccaggcct gcatccagca tcgcctgttc gtatcccttc tgtttgatga
    14041 tagtacgttc gtcgagacgt gcgccgagat aggcaatgtg gcgatgcccg cgagcaataa
    14101 tggcggtagt catctggcgt gccgcttcaa agttatcaaa accgacggcg atatcgaggc
    14161 acggcgactg gctgtccatc aactccacca ccgggatccc cgccacttca atcatcttta
    14221 aggtgcgcgg cgtgtgggta cgttcggtga ggatcaggcc gtcgatattc caggagagca
    14281 tggattcgag acgttcttgc tccatttccg gtttataacc gtagtgcgcc agcatcgtct
    14341 gataaccgtg cgcgtcggtg acgctttcga ttccgcgtaa tacttccgcg aaaacctggt
    14401 tggtgagaga aggtaacagg acgccaatcg cccggctggt agcgttagag aggatatcgg
    14461 gcgcacgatt gggaatatag cccagttcat caagagcggc ggcaatcttg ccgcgtagag
    14521 cgacggaaac ctgctccggg ttgcgtaaaa aacggctgac cgtcattttg gtcacgccta
    14581 cacgatcagc cacatcctga agtacgggtc ttttcttttt catcgtcctg aaggtacaaa
    14641 agagatagat tctcttagtt taacacggac gcatcagaac cttcccgggg aaaacagtgc
    14701 ttgtttacaa ttattagata tacactaaat caattgcatc gcattgtgct aacgacgcgg
    14761 taaaaccccg gaagcgtgca tcagcacgcg accggagcga gcgaggaagc ctgcaaaaag
    14821 gcaggcttca aagatgccgt tgaactttaa accggcggca gatcgaacag taacacttcg
    14881 ctgtcactat ccgcatggat ggagattgcc tgctcatccc agattgccag accatcgctg
    14941 gtcgaggctt tcacgccgtt aatggtgaca ttgcctttca ccacctggat ccagacgcgg
    15001 cgttcagcgg caatctgatg caccgactgt tcatctttca gcaacgccca gcggtacagt
    15061 tccatatcct gatgcacttt caatgaacca tctcgagcat ccggcgagag caccagctgt
    15121 ttgccctgta cggcatcgaa gcgacgctgt tcataacgcg gcgtaatacc gttttcttca
    15181 ggcatgatcc agatctgata cagatgcaga cgctcggtgc tgcttgggtt gtactctgag
    15241 tgacgaatac ccgtacccgc actcataatc tggaactcac ccgccggaac ctgctcttta
    15301 ttgcccatgc tgtcctgatg ctcaacagta ccttccagca cgtaggtcaa aatttccata
    15361 tctttatgcg ggtgagtgcc gaagccctgc cctgcttcaa tcacgtcgtc gttaatcacg
    15421 cgcagcgcgg agaagcccat aaagttcgga tcgtaatagt tggcaaaaga gaaagtatgc
    15481 caggagtcca gccagccatg atttgcatga ccacgttcat ttgctttgcg taagtagatc
    15541 atttgtattc gccccctgaa tgatttcgat gggcttagtg tggacccgat ctgcctggga
    15601 tgatagaggg tgaaaattga cccctctgtt caaaaaaatt gaactattcg aggggccatc
    15661 aaacttactt cgcgagagtc actgtggagg gagaggcttg ctcaaatccg cgttcaagga
    15721 tttccagatt ggtaagaact tcagattcct tgacgtaatt tggcgcaccg ttggtgatgg
    15781 tttgatacaa cgcatcataa acgcgcccgt aatcgcccat ctccggcttc atctcttctc
    15841 tgaccgtcac gccttcgtca ttgacatact ccagcacacc gaccgaatca tccgccgcga
    15901 atcccggttc gcccggcata atattagcct tcaggctggt ttcctgctgg tcgataccgt
    15961 atttaataaa cgaacctttc ttaccgtgaa cgataaattt cggataatcg attttcacca
    16021 gatggctggt tttgacgatg gctttcaggt cgccataaaa cagctgcgct tcaaaggtat
    16081 cgtcaggatt ggctttatta cgcaggctgc ggatgtcata agcgacgtga tccgggcgac
    16141 cgaacagaga aataatctgg tccatcgtat gcacaccaag gccatagaac gcgccatcct
    16201 gcggcagtcc aggtttggtt tctgccaccg ggcggtaata gtcaaaatgg ctttccactt
    16261 cgacaatctc tcccagcttg ccgctttcaa tcgctttttt cgccgtcagg aagcaggaat
    16321 caaagcgacg attctgatat ggcgtgacgg tcagcccttt acttttcgcc agagcaaaca
    16381 gctctttcgc ctgcgcaagc gtcgaagtga acggtttttc gaccagcaca tttttcccgg
    16441 cttccagcgc gcgcttcgcg tactcgaagt ggctgtccgc atgggtgcag acaacaacca
    16501 gcttaacatc gggatcgttt agcacttcgt cgagatcgct ggtgaaatgg atatgggaat
    16561 aaatgggagc ctgttcttcc ggcttcgcat ggcgacgaaa aatatgcgcg acatgccagc
    16621 tatccttgcg gttaagtaca tacggcagat ggtaacgggt ggtgcttttg ccgaagccaa
    16681 taaaggcgca gttgatgacc atgatttcgt cctttttaag gtggttattt acaccttagc
    16741 gcaaagcgga cgtggttcct actggagtgc gcataacgaa cacaagcact cccgtggata
    16801 aattgagaac gaaagatcaa aaaaaaagcc agcacccggc tggctaagta atactggaag
    16861 caatgtgagc aatgtcgtgc tttcaggttc tccgcgaggg tcttcctgat cgcgagacaa
    16921 taataatcat tctcattcgc acttgtccaa cactttttgc aaaaaaatgc atttgactcg
    16981 catttgaaag tcaatgatgt tgaaagggac atttacccca aagaggacaa aggaatgagt
    17041 gagatagtaa tacgccacgc agaaacacgg gattacgagg ccatcaggca gattcacgcc
    17101 cagccggagg tgtattgcaa cacactacag gtgcctcatc cttccgatca tatgtggcag
    17161 gagcgactcg ccgatcgtcc cggcatcaaa cagttagttg cctgtattga tggaaccgta
    17221 gtaggtcatc tcaccattga tgtacagcaa cgcctgcgcc gcagtcatgt tgccgatttt
    17281 ggtatttgtg tcgactcccg ttggaagaat cgcggcgtcg ccagcgccct gatgcgagag
    17341 atgattgaaa tgtgcaacaa ctggttgcgg gtagatcgta ttgaactaac ggtgttcgtc
    17401 gataacgcgc aagcaattaa ggtctataaa aaattcggct ttgagattga agggaccggt
    17461 aagaagtacg cattgcgtaa tggtgaatat gtcgatgcgt attatatggc gcgggtgaag
    17521 taagatagtg ccctttttct gagatggaaa aagggtgtca ttcaaaatcg gcataccttc
    17581 ctttaatgta tttattttcc caataaatat attgagattt acctcataat tacttcctaa
    17641 agtgtaatat tttattttta atatatacgc ctacaatttc ctggagtaaa taaataacaa
    17701 ttaacaagca taatagtgcc attgataaaa tagcatgcca taaaaggact tttcagggat
    17761 gagtaatatt gtttacctga cagtaacggg agaacaacaa ggaagcatct ccgcaggttg
    17821 tgggactact gaatctatag gtaatcgctg gcagagcggg catgagaatg aaatatttac
    17881 attctcactc gcaaatagca ttactaatac ggggcttggt tcacagttac agggtataac
    17941 attttgtaaa ttaattgata aaagcactcc attacttatt aattccatta acaataatga
    18001 gcaattattt atggaatttg acttttatag aatcaataga tttgggagat gggaaaagta
    18061 ttattatata caactaagag gcgcttttta tcggctattc atcatcagat cattgaaaat
    18121 caactggata cagaaacaat aactgttagt tatgaattta tcctctgtca acatcttatc
    18181 gcaaataccg agttcagcta tttggcactc cctgaaaatt ataaccgttt gtttttacca
    18241 aattcaaaaa aacaaacaaa taatcgtttc aaaacgttaa acagcaaagc tgttggcagg
    18301 ctacttgctg ctggtggcgt atacaatggg aacattgaag gattcagaga tactgcggaa
    18361 aaactgggtg gagatgcaat caaaggctat gatcaaatac taaatgaaaa aacagcgggc
    18421 atagcgatag caacagcatc tattctttta acaaagcgtt ctaaagttga tacatataca
    18481 gaaataaata gttacttagg caaacttaga ggtgaacaaa aacttcttga tggcatagac
    18541 ataatagaaa taata
//
LOCUS       DAJVTL010000090        18281 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.091, whole genome shotgun sequence.
ACCESSION   DAJVTL010000090 DAJVTL010000000
VERSION     DAJVTL010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18281
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.091"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..505
                     /locus_tag="OQQ26_002919"
     CDS             <1..505
                     /locus_tag="OQQ26_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="stationary phase growth adaptation protein"
                     /protein_id="HCS1858304.1"
                     /translation="HPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTK
                     DYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILSLPESNVIHAGYGSYAV
                     IEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNK
                     QLPQPSK"
     gene            complement(915..2048)
                     /gene="thiH"
                     /locus_tag="OQQ26_002920"
     CDS             complement(915..2048)
                     /gene="thiH"
                     /locus_tag="OQQ26_002920"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HCS1858305.1"
                     /translation="MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMA
                     LLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
                     PLAETEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMD
                     ERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHP
                     ELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL"
     gene            complement(2045..2815)
                     /gene="thiG"
                     /locus_tag="OQQ26_002921"
     CDS             complement(2045..2815)
                     /gene="thiG"
                     /locus_tag="OQQ26_002921"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418418.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HCS1858306.1"
                     /translation="MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKR
                     VDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDA
                     RWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQG
                     LETHAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAK
                     AFRLAVEAGLLARQSGPGSRSHFAHATSPLTGFLEASA"
     gene            complement(2817..3017)
                     /gene="thiS"
                     /locus_tag="OQQ26_002922"
     CDS             complement(2817..3017)
                     /gene="thiS"
                     /locus_tag="OQQ26_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HCS1858307.1"
                     /translation="MQILFNDQPMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPRE
                     QWTQHIVQDGDQILLFQVIAGG"
     gene            complement(3001..3756)
                     /gene="thiF"
                     /locus_tag="OQQ26_002923"
     CDS             complement(3001..3756)
                     /gene="thiF"
                     /locus_tag="OQQ26_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole biosynthesis adenylyltransferase ThiF"
                     /protein_id="HCS1858308.1"
                     /translation="MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAA
                     LYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA
                     LQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVVLNTPLITASAVGFGGQLMV
                     LTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGE
                     LRLFDGKSSQWRSLALRRASGCPVCGGSNADPV"
     gene            complement(3749..4384)
                     /gene="thiE"
                     /locus_tag="OQQ26_002924"
     CDS             complement(3749..4384)
                     /gene="thiE"
                     /locus_tag="OQQ26_002924"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HCS1858309.1"
                     /translation="MYQPDFPPVPFRSGLYPVVDSVQWIERLLDAGVRTLQLRIKDRR
                     DEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAG
                     LRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYP
                     TVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE"
     gene            complement(4384..6279)
                     /gene="thiC"
                     /locus_tag="OQQ26_002925"
     CDS             complement(4384..6279)
                     /gene="thiC"
                     /locus_tag="OQQ26_002925"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HCS1858310.1"
                     /translation="MSATKLTRREQRAQAQHFIDPLEGTAFPNSKRIYITGTQPGVRV
                     PMREIQLSPTLIGGSKEQPQYEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWID
                     ARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMNFGARLPENITAGFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL
                     GDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
                     LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQTIEVGMADMSENFRARGGEI
                     YLRKEEA"
     regulatory      complement(6360..6460)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(6491..6961)
                     /locus_tag="OQQ26_002926"
     CDS             complement(6491..6961)
                     /locus_tag="OQQ26_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000934304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rsd/AlgQ family anti-sigma factor"
                     /protein_id="HCS1858311.1"
                     /translation="MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQ
                     IMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLEFCAVNA"
     gene            7056..7829
                     /gene="nudC"
                     /locus_tag="OQQ26_002927"
     CDS             7056..7829
                     /gene="nudC"
                     /locus_tag="OQQ26_002927"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HCS1858312.1"
                     /translation="MDRIIEKLDHGWWVVSHEQKLWLPKGELPCGEAANFDLVGQRAL
                     QIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCG
                     HEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKKLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE"
     gene            7869..8933
                     /gene="hemE"
                     /locus_tag="OQQ26_002928"
     CDS             7869..8933
                     /gene="hemE"
                     /locus_tag="OQQ26_002928"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HCS1858313.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGNKVALQGNMDPSMLYALPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVP
                     PEHAGVFVEAVHRLSEQYHR"
     gene            9090..9761
                     /gene="nfi"
                     /locus_tag="OQQ26_002929"
     CDS             9090..9761
                     /gene="nfi"
                     /locus_tag="OQQ26_002929"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HCS1858314.1"
                     /translation="MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFV
                     DGHGISHPRRLGVASYFGLLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSVDSALAWVQSCMKGYRLPEPTRWADAVASERPAFVRY
                     TANQP"
     gene            9804..10394
                     /locus_tag="OQQ26_002930"
     CDS             9804..10394
                     /locus_tag="OQQ26_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HCS1858315.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSE
                     LVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEI
                     FRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ"
     gene            10581..10853
                     /gene="hupA"
                     /locus_tag="OQQ26_002931"
     CDS             10581..10853
                     /gene="hupA"
                     /locus_tag="OQQ26_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HCS1858316.1"
                     /translation="MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            10866..11561
                     /locus_tag="OQQ26_002932"
     CDS             10866..11561
                     /locus_tag="OQQ26_002932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709795.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HCS1858317.1"
                     /translation="MNSFNEGVVSPLLSFWRRSLMLAGALFLTACSHNSSLPPFTASG
                     FAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPV
                     NIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQG
                     RWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVAN
                     SDFCRWQPNEKTF"
     gene            complement(11564..11989)
                     /gene="zraP"
                     /locus_tag="OQQ26_002933"
     CDS             complement(11564..11989)
                     /gene="zraP"
                     /locus_tag="OQQ26_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HCS1858318.1"
                     /translation="MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQ
                     QTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLD
                     ELRVKRDIAMAEAGIPRGTGMGMGYGGCGGGGHMGMGHW"
     gene            12227..13603
                     /gene="zraS"
                     /locus_tag="OQQ26_002934"
     CDS             12227..13603
                     /gene="zraS"
                     /locus_tag="OQQ26_002934"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HCS1858319.1"
                     /translation="MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAA
                     ARQTLLEKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTI
                     VMHSNSGMVGKQLYSPQEMQQLHPGDEEVWRRIDSADGEPVLEIYRQFQPMFAAGMHR
                     MRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALATVLLASVLSFFWYRRY
                     LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQL
                     AQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRF
                     TANDTLPVIQADPDRLTQVLLNLYLNAIQAIGQHGVISVTASESGAGVKISVTDSGKG
                     IAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGATFTLCLPVN
                     ITRKDPQG"
     gene            13600..14925
                     /gene="zraR"
                     /locus_tag="OQQ26_002935"
     CDS             13600..14925
                     /gene="zraR"
                     /locus_tag="OQQ26_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
                     /protein_id="HCS1858320.1"
                     /translation="MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQ
                     VRERVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALD
                     YLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAP
                     SEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAF
                     TGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVR
                     LIAATHRDLAAEVKAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERN
                     RKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIAGTPIP
                     LGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR"
     gene            complement(14922..16211)
                     /gene="purD"
                     /locus_tag="OQQ26_002936"
     CDS             complement(14922..16211)
                     /gene="purD"
                     /locus_tag="OQQ26_002936"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HCS1858321.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPTLQ
                     NVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLE
                     GSKAFTKDFLARHNIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GDKDTGPNTGGMGAYSPAPVVTDEVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACEGKLDEKTSEWDERASLGV
                     VMAAGGYPGDYRTGDVIHGLPLEEVADGKVFHAGTKLADNEQVVTSGGRVLCVTALGH
                     TVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN"
     gene            complement(16223..17812)
                     /gene="purH"
                     /locus_tag="OQQ26_002937"
     CDS             complement(16223..17812)
                     /gene="purH"
                     /locus_tag="OQQ26_002937"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HCS1858322.1"
                     /translation="MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVV
                     VNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEI
                     DDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVTTATQVQGKALSYNNIADTDAALECVK
                     EFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRD
                     LGMVGAEELRVVTKRQPSEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEV
                     IAAADEHGIAMLFTDMRHFRH"
BASE COUNT         4139 a         4894 c         4997 g         4251 t
ORIGIN      
        1 acatccggat ggtgatattc gtgatttatc atttcttgat gctcatcagg ctgtctacgt
       61 tcagcatcat gagggcaaag agcctttaga gtatcgcttt tgggttacct actctcttca
      121 ctgcttcaca aaagattatg aacatcagac gaacgaagaa aaacaatcgt taatgtacca
      181 cgcgcctaaa gaatctcgtc ccttctgcca gcaccgttat aacttagcgc gcacacactt
      241 aaaaagaact attttgtcgc tgccagaaag caacgttatt catgccgggt atggtagcta
      301 tgccgtgatt gaggtggact tagacggagg agataaggca ttttactttg ttgcgttcag
      361 ggctttcagg gaaaagaaaa aactccgttt gcatgtaact agcgcttatc ccatttctga
      421 aaaacagaaa ggtaaatcag tgaaattttt caccattgcc tacaacttat tgagaaataa
      481 gcagcttcct cagccctcaa aataacaaaa cccaccttaa ggtgggtttc gccagagaat
      541 tatctctggt attcagaacg ccattaccgg actttgcctt gaccttgcga taatcgcagg
      601 ttgcgggatg tctgaatttc ttcagtctgc tgcatcctgg aagatgagaa catgtgttct
      661 tattttcgtc tctatcatag ttgagtattt actctcttac aatcagatct ctttcattgc
      721 tcaacaggcg atggcttcag actttgtatt acggaatttt taagaaaggc agggcgaaac
      781 gaggaagaag cttttcgccc tggacaacat tcctgctgac ggcactacca taaaaaaaca
      841 caacgctttc aacaaccttg cgtttttcat cttccgtagc ggctcggaat aaatttacgt
      901 tcttacattc cgtctcatag tctttgcgag gcgcgtccca gatagctgtc ccagtctttc
      961 cataccggct gcaaaccctg agcggttaac gcggcagcaa ccgcttccgg tctgcgatcg
     1021 tcgtgcggtg agaactgttc caactcgggg tgattatcgg catagccacc tggctgcgtt
     1081 ttcgagaagg cgctgacgtt attgatcgcc agcggaataa cgcgatcgcg aaaccacggt
     1141 gattcccgcg tggagagtga cagttcaatc tccggtgcaa gcagtcggaa ggcgcagatg
     1201 gtttgcacta actggcgttc atccataatc gacgcaggct caatgccgcc agtacacggg
     1261 cgcaggcgcg gaaaggagac agagtaacgg ctttgccagt aatgctgttg cagccatagc
     1321 aaatgttcgg caaccatata gcagtcaacg cgccagttgt cggaaaggcc aattagcgcg
     1381 ccgaggccta tcttatcaat ccccgcacgc cccagccgat ccggcgtttc caaccgccag
     1441 aagaagtcct gttttttgcc tttcagatga tggcgggcat aagtcgcctc gtgatatgtc
     1501 tcctgataaa ccatcacgcc atccagacca agctgcttta actcggcgta ttccgtctcc
     1561 gccagcggtt gcacttccat ttgtagtgaa gagaactgtt cacgcagggc ggggagatga
     1621 cgacgaaagt aatccatccc cactttcgcc tgatgttcac cagtgactaa tagcagatgt
     1681 tcaaagccca tctcccgtat agcggcgctt tccctggcaa tatccgcttc atccagcgtt
     1741 ttgcgcttga tgcgattact catggaaaat ccgcagtacg tgcagtcgtt agcgcaaaga
     1801 ttggaaagat aaagcgggac gtagaaacta actgtgttgc caaatcgctg acgggtcaga
     1861 cgctgcgccc gttgggccag ttgttccaga tagccactgg cggctggcga taacagcgcc
     1921 atcatatcgt cgcgggtgaa ttgcgaggca tttagcgccc gctctacgtc aacagccgtt
     1981 ttgccgttga tacgcaggcg gatgtcatcc cagtccagtt gtcgccagcg atcgctgaag
     2041 gttttcatgc cgatgcctcc agaaatccag tcagcgggct ggtggcatga gcaaaatgac
     2101 tgcggctgcc cggtccggac tgacgtgcca gcaggcctgc ttctaccgcc agacgaaatg
     2161 ccttcgccat gttgacggga tcgtccgcta cggcaatcgc cgtattcact aacaccgcgt
     2221 cggcccccat ttccagggcc tgcgcggcat ggctgggaac gccgatgcca gcatcgacaa
     2281 ccaccggaac agtggcctgc tggataataa tctccagcat ggcatgggtt tccagtccct
     2341 gattcgagcc aatcggcgcg ccgagcggca tcaccgctgc acagccgact tcttccagac
     2401 gtttacacaa taccggatcg gccccgcagt aaggcagcac gacaaatccc tgttgtacca
     2461 gcgtttcggc ggctttcagg gtttcgatgg gatcgggcaa tagccagcgg gcgtcaggat
     2521 gaatctctaa ttttagccag tttgtgccta atgcttcacg tgccagatgg gcggcgaaaa
     2581 tggcttcttc cgctgttttc gccccggaag tattcggcag cagggtcaca cccgccgcga
     2641 taagcggttc gaggatagcg tcgttgtgct ggcgcaagtc gacacgtttc atcgccagtg
     2701 tcaccaactg gctgccggaa gcgcggatcg cctccaccat cagttgtgaa gaagcgaatt
     2761 tccctgtgcc ggtaaacaga tgtgaatcaa acgttttgtc cgcaatacgt aacatctcaa
     2821 ccccctgcaa taacctgaaa aagcaggatc tggtcgccat cctgcacgat atgttgcgtc
     2881 cactgctcac gcgggacgat ttgctgatta atcgccagag ccgcgcccgc ttgtcgttgg
     2941 tcgagttgct ccagtagttc gtgaacagtt tgcccggcgg cgcactgcat cggttgatcg
     3001 ttaaacagga tctgcattgc ttcctccgca taccgggcaa ccactggcgc ggcgcaacgc
     3061 caggctgcgc cactggctcg atttaccgtc gaacagtcgg agttctcccg caggtgtctc
     3121 tataccgctt aataacttaa tggcttccag tgcctgcaaa gtgcccataa ccccgaccac
     3181 cgggccaacc acgcccgccg tgcggcagtt gcgttctggc tcctggttat ctggccacag
     3241 gcagcggtaa cacccctgct cccagggcgg cgtcagtacc atcaactgac cgccaaatcc
     3301 gaccgcgctg gcggtgataa gcggcgtgtt gagtaccacg caggcggcat taatctcctg
     3361 gcgagtcgcc atattgtcgg tacagtcgag caccacatcg gcccgtgcaa ccgcatcttt
     3421 taacgcctca cccgttaacc gttgttgtaa tgctgtcagt tgaatgtcgg gattcaactg
     3481 tgtcagtcgc tgttggctga cctgcgattt cgggcgatcg atatcttcag tggtaaagag
     3541 gatttgtcgt tgcagattgc ttaaatgcac atcgtcgtca tctgccagta ccagcgtccc
     3601 gacgccagcg cccgccaggt atagcgcagc aggtgtaccc agcccgccaa gaccgataat
     3661 cagcacctgg ctgtcgagca gtttttgctg cccgtcaaga gcgatatcgt cgagcagaat
     3721 ttggcggcta taacgcataa agtcacggtc attcatcgcc aactcctgca atttccagca
     3781 actgtgccgt tgccaaacgc cagtctgcgg cttgagtaat ggcgctgacg acagcaatac
     3841 tgccgacacc cgttgctatc accgcaggcg cgcgcgcaag actgataccg ccaatcgcca
     3901 cggtgggata atctgccagg cgctcaacat gccgtgccag ttgttccagc ccctgcggtg
     3961 cagaaggcat ctgtttggtt tgcgtcggga acacatgtcc cagcgcgata taagaggggc
     4021 gtgctgccag cgcgacgtcg atttccatat cgtcatgtgt cgaaacgccc agccgcaggc
     4081 ctgccgcgcg gatggcattg agatcggtgg cttgcaaatc ttcctgcccc aaatggacgc
     4141 catacgcctg atgcttgatt gcgagccgcc agtaatcgtt gataaacaat cgcgcgttat
     4201 agcggcggcc cagcgcaatt gccgccacga catcggcttc cacctcttca tcgcgccgat
     4261 ctttgatgcg tagctggaga gtacgtacgc ctgcatccaa cagacgttcg atccactgta
     4321 cgctgtccac caccgggtat agtcctgaac gaaaaggtac aggaggaaaa tcaggctgat
     4381 acatcacgct tcctccttac gcaggtagat ttctccgcct ctggcgcgga agttctccga
     4441 catatccgcc attcccactt caatggtttg tgcggcggcg taatcacgca cttcctggct
     4501 gattttcatc gagcaaaatt tcggtccaca catggagcaa aaatgggcga ctttgccgga
     4561 ctcttggggc agggtttcat cgtgataagc gcgggcggta aacgggtcga gggccagatt
     4621 aaactggtct tcccagcgaa attcgaagcg ggctttcgac atggcgttat cgcgaatttg
     4681 cgcgcccgga tgcccttttg ccaggtctgc agcgtgggcg gcaatcttat aggtgataag
     4741 cccctgctta acatcttctt tattgggcag acccagatgc tcttttggcg ttacgtaaca
     4801 gagcatcgcg cagccaaacc agccaatcat cgccgcacca atccccgacg tgaagtggtc
     4861 atagcccggc gcaatatcgg tagttagcgg ccccagagtg taaaacggcg cttcgtggca
     4921 gtgttctaac tcctcggtca tattgcggcg gatcatctgc atcggcacat ggcctgggcc
     4981 ttcaatcatc acctgtacgt catattccca ggcgattttg gtcagttcgc ccagcgtatg
     5041 cagctcggca aactgcgctt catcgttggc gtcctgaata gaaccggggc gcagaccgtc
     5101 gcccagcgac agcgaaacgt cataagcggc acagatttca caaatttcgc ggaagtgttg
     5161 atagaggaaa ttttcctgat gatgggagag gcaccatttc gccataatcg aaccgccgcg
     5221 agagacgata ccggtcaggc gtttcgcggt catcggcacg tagcgcagca gtacccccgc
     5281 atggatagtg aagtaatcca caccttgctc ggcctgttcc agcagcgtgt cgcggaacgc
     5341 ttcccaggta agatcttcgg cgatcccgtt aaccttctcc agcgcctggt agatcggcac
     5401 tgtaccgatc ggcaccgggc tgttacgcaa aatccactcg cgggtttcgt gaatatagcg
     5461 accggtggag agatccatca ccgtatccgc tccccagcgc gtggaccata ccagcttttc
     5521 cacttcttct tcgatggaag aggtgaccgc tgagttgccg atattggcgt taacttttac
     5581 caggaagtta cggccaataa tcattggctc cgattccgga tgattaatgt tggccgggat
     5641 aatcgcacgt ccggcagcaa cttcatcacg gacaaatccc gcagtgatat tttccggcag
     5701 acgtgcgcca aagttcattc ccggatgctg gtggcgtaaa acttcgctac ggatgcgctc
     5761 gcggcccata ttctcgcgga tggcgatgaa ttccatttcc ggtgtgatga tgccctggcg
     5821 ggcgtagtgc agttgtgtga cgcggcgtcc tgctttggcg cgttttggcg ttaatacgcc
     5881 gctaaaacgt agctcgtcga ggccatcatc tgccagccgc gctttagtgt aatcggaact
     5941 gcgcacggta agttcttcgg tatcgccgcg cgcatcgatc cacggctggc gtagttttgc
     6001 cagcccttgc tgcacgttaa tggcgatctg tggatcgcca tacgggccgg aggtgtcgta
     6061 gaccggaatc gcttcgtttt cttcgtactg cggctgttct ttgctaccgc caattagcgt
     6121 cgggctaagc tggatctcac gcatcggcac gcgcacgccg ggttgtgtgc cagtgatata
     6181 aatgcgtttt gagttgggaa aggcggtgcc ttccaggggg tcgataaaat gttgggcctg
     6241 ggcgcgctgt tcgcggcggg tcagttttgt tgcagacata gctcattcca aaaagttaag
     6301 gacgtggctt gtcagacgac ggatgaagca agagacgatc gccgcaaagg cgatgcaata
     6361 gcagattaac tcttgttccc ttcgcaggta ttagcctgat caggttccgc ggatcccgaa
     6421 taaacggtct cagccagtta aggcactccg acaagaaatt agcccccaca aacggggcgt
     6481 tgaatgtaaa ttacgcgtta acagcgcaga actcaagcac cagcagaatc agcttatctt
     6541 ccagcacaaa gcgcgcttcc agcgcctcgc cgatgtcaga taaaacctgt tgaaactcaa
     6601 ggtaattatc atgatcgatg gcggtttcca ggctggaatc gtagtaatcc ataatctgtt
     6661 gggtattggc ttcgagttgc ggccaaatct tcgcggcgcg cgcgagttgc ccgttgcctt
     6721 ccagcttatg aagaatgcgc tcataaatac tgaaatgtcc ggcagacaag taatcgacca
     6781 ggctctgaca aaaatcatca agggcttttt cgtttagcct catgtacgat tctttgccag
     6841 gcttaatgcc aaccagattg tagtaagcca cgagcagatg cttacgtaca tgtagccagc
     6901 gatcaaccag tttgttactt cctctgacgc gctccgtcag gttatcgagc tggttaagca
     6961 tgattgactc cgcaagtttg tattcaaaaa ctgctcagtg agaaatgtaa aaaccatgtt
     7021 aaacatgcca gtgatgcaaa ggtagtgcaa gagctatgga tcgtataatt gaaaaattag
     7081 atcacggctg gtgggtcgtc agccatgaac aaaaattatg gttgccgaag ggagaattgc
     7141 catgtggcga agcggcaaat ttcgatcttg tgggtcagcg cgcactacaa atcggcgaat
     7201 ggcaggggga acctgtttgg ttagtacaac agcagcggcg tcacgatatg gggtcggtac
     7261 gtcaggtcat tgatctcgat gttgggctgt ttcaactggc cggacgtggc gtacaactgg
     7321 cggagtttta ccgatcgcat aaatactgtg gttactgcgg gcatgaaatg tatccaagca
     7381 aaaccgaatg ggcgatgctg tgcagccatt gccgtgagcg ttactacccg caaatcgccc
     7441 cctgcattat tgttgccatc cgtcgcgatg attcgatcct cctcgcccag catacccgcc
     7501 atcgtaacgg tgtccatact gtacttgctg gattcgtcga agtgggcgaa accctcgagc
     7561 aggcggttgc acgggaagtg atggaagaga gcggcatcaa agtcaaaaaa ttgcgttacg
     7621 tgacttctca gccgtggccg tttcctcagt ctttaatgac cgcgtttatg gcggaatatg
     7681 acagcggcga catcgtgatc gacccgaaag aattgctcga ggcgaactgg tatcgctatg
     7741 acgatttgcc gttactcccg ccgcccggca ccgtagcgcg ccgtctgata gaagatacgg
     7801 tggcgatgtg tcgggcagag tatgagtgat gatacactga ccgcctgacg cactaaggaa
     7861 cagccaaaat gaccgaactt aaaaacgatc gttatctgcg ggcgctgctg cgccagcccg
     7921 ttgatgtcac tccagtatgg atgatgcgcc aggcgggtcg ctatctaccg gaatataaag
     7981 ccacgcgcgc ccaggcgggc gattttatgt cgctgtgcaa aaacgccgag ctggcgtgcg
     8041 aagtgacttt gcaaccgctg cgccgctacc cgctggatgc ggcgatcctc ttttccgata
     8101 tcctcaccgt gccggacgcg atggggttag ggctctattt tgaggccgga gaaggtccgc
     8161 gttttacctc gccagtcacc tgcaaagccg acgtcgataa actgccaatt ccggacccgg
     8221 aagatgagct gggttacgtg atgaacgcgg tgcgtaccat tcgtcgcgaa ctgaaaggcg
     8281 aagtgccgct gattggtttt tccggcagcc cgtggacgct ggcaacctac atggtggaag
     8341 gcggcagcag caaagccttc accgtgatca aaaaaatgat gtatgccgat ccgcaggcgc
     8401 tgcacgctct gctcgataaa ctggcgaaaa gcgtcacttt gtatctgaat gcgcagatta
     8461 aagccggtgc tcaggcagtg atgattttcg acacctgggg cggtgtgctt accgggcgcg
     8521 attatcaaca gttctcgctc tattacatgc ataaaattgt tgatggttta ctgcgtgaaa
     8581 acgacggtcg ccgcgtaccg gtcacgctgt ttaccaaagg cggcggacag tggctggaag
     8641 cgatggcaga aaccggttgc gatgcgctgg gcctcgactg gacaacggac atcgccgatg
     8701 cgcgccgccg cgtgggcaat aaagtcgcgt tgcagggtaa tatggatccg tcgatgctgt
     8761 atgcactgcc tgcccgcatt gaagaagaag tagcgactat acttgcaggt ttcggtcacg
     8821 gcgaaggtca tgtctttaac cttggtcacg gcattcatca ggatgtgccg ccagaacatg
     8881 ctggcgtgtt cgtggaggca gtgcatcgac tgtctgaaca gtatcaccgc taagagcctg
     8941 gtccatcagg ctattttatt tgccattttg aggccgggca gtgctcaaaa tcctcacgta
     9001 ctacgtgtac gctccggttt ttccgcgctg tccggcctca aactgccttc aacaattacg
     9061 cctgttgaac caggctctaa ggagcgatta tggatctcgc gtcattacgc gctcaacaaa
     9121 ttgaactggc ttcttctgtg atccgtgagg atcgactcga taaagatcca ccggatctga
     9181 tcgccggagc cgatgtcggg tttgagcagg gcggagaagt gacgcgagcg gcgatggtgc
     9241 tgctgaaata cccctcgctt gagctggtgg agtataaagt ggcccgcatc gccaccacca
     9301 tgccttacat tccaggtttt ctttccttcc gcgaatatcc tgcgctgctg gcagcgtggg
     9361 agatgctgtc gcaaaaacct gatttagtgt ttgtcgatgg tcatgggatc tcgcatccgc
     9421 gccgtcttgg cgtcgccagc tattttggct tattggtgga tgtgccgacc attggcgtgg
     9481 cgaaaaaacg gctctgcggt aaattcgaac cgctctccag cgaaccgggc gcgctggccc
     9541 cactgatgga taaaggcgag cagctggcct gggtctggcg cagcaaagcg cgctgtaacc
     9601 cgttgtttat cgctaccggc catcgggtca gcgtggacag cgcgctggcg tgggtacaaa
     9661 gctgcatgaa aggctatcgt ctgccggagc caacgcgctg ggcggacgcg gtggcctcgg
     9721 aacgtccggc gttcgtgcgc tatacagcaa atcagcccta attcaggtaa actgcggata
     9781 atttccgtat ttgagaactc aacatgttac aaaacccaat tcatctgcgt ctggagcgct
     9841 tggaaagctg gcagcatgtc actttcatgg cttgcttatg cgaacgcatg taccccaatt
     9901 acgccatgtt ctgccagcaa accggttttg gtgatgggca aatttaccgt cgtattctcg
     9961 atctcatttg ggaaacgctg accgttaaag acgcaaaagt aaatttcgac agccaactgg
    10021 agaaatttga agaagcgatt ccttcagccg acgatttcga tctgtacggc gtttatccgg
    10081 caatcgatgc atgcgtggcg ttaagtgaac tggtccattc gcgtttgagt ggtgaaacgc
    10141 tcgaacacgc ggtagaagtg agtaagacct ccatcacaac cgttgcgatg ctggaaatga
    10201 ctcaggctgg tcgcgaaatg agcgatgaag agctcaaaga aaacccagct gtagagcaag
    10261 aatgggacat tcagtgggaa atattccgac ttttagctga gtgcgaagaa cgcgatatcg
    10321 agctgataaa aggccttagg gcagacctgc gtgaggcggg tgagagcaat attggtataa
    10381 tttttcagca ataagaccag aaaacgtgat ttaacgcctg atttgtcgta cctggagtct
    10441 tccctttcgc cccccgtctg gtctacattt ggggggcgaa aaaaagtggc tatcggtgcg
    10501 tgtatgcagg agagtgctat tctggcattt ccgtcgcact cgatgcttag caagcgataa
    10561 acacattgta aggataactt atgaacaaga ctcaactgat tgatgtaatt gcagagaaag
    10621 cagaactgtc caaaacccag gctaaagctg ctctggagtc cactctggct gcaattactg
    10681 agtctctgaa agaaggcgat gctgtacaac tggttggttt cggtaccttc aaagtgaacc
    10741 accgcgctga gcgtactggc cgcaacccgc agaccggtaa agaaatcaaa attgccgcag
    10801 ctaacgtacc ggcatttgtt tctggcaagg cactgaaaga cgcagttaag taagattgcg
    10861 tggcagtgaa cagttttaac gaaggggtgg tttcacccct tttgtctttc tggcgtcgat
    10921 cattgatgct ggcaggcgct ctgtttctca ctgcctgtag tcacaactct tcacttcctc
    10981 cctttaccgc cagtggattt gctgaagacc agggcgcggt acgtatctgg cgaaaagaca
    11041 gcggcgataa tgtgcatctg cttgccgtgt ttagcccgtg gcgcagtggc gataccacca
    11101 cgcgagagta tcgctggcag ggcgataacc ttacgctcat caatatcaac gtttacagca
    11161 aaccgccggt gaacattcgc gcgcgttttg acgatcgcgg cgatctgagc tttatgcaac
    11221 gtgaatccga tggggaaaag cagcagcttt ctaacgacca aatcgattta taccgttatc
    11281 gtgctgatca gatccgccag attagcgatg ccttacgtca ggggagagtc gtgctgcgcc
    11341 aggggcgctg gcatgcgatg gaacagaccg tgaccacctg cgaagggcaa accattaaac
    11401 ctgatttaga ttcgcaggcg atagcgcata tcgagcgccg ccagagccgc tcttctgttg
    11461 atgtcagcgt ggcatggctg gaagcgcccg aaggttcgca attactgttg gtggcaaact
    11521 ctgatttctg tcgctggcaa cccaacgaga aaacgttctg attttaccag tggcccatac
    11581 ccatatgacc gccaccaccg cagccgccgt aacccatgcc cattccggta ccgcgcggaa
    11641 tacccgcttc agccatcgca atatctcgtt tcacccgtaa ctcatctaac gactgacgca
    11701 aattctccat ctctttggcg accgcgttaa ttttgctgct atccggtggg ttcgcggcta
    11761 acagggcatt gtattcataa cgcttcgtca ccagttgctg ttgcagtgcg ctgctttgag
    11821 cgtaaaagtc attatggatt ttctgccacg ctgtctgttg ttcgctggtc aaaggcgcgg
    11881 cattttgctg ccacataccg tgtccgccgt gagcaaatgc agatgtcgag cccatcgcca
    11941 ttgctgaaag cgccatcatt accagggcaa ttttcgtgtt ccgtttcatg gttaatcctc
    12001 cagtggttgt cttacttcgg gtattgcatc ttccgtgcca acgatgaaac gctgatatga
    12061 cgggtaatct ggcatgataa acgagtaaaa atgactcgcc tgctgcgggt agcgagtcat
    12121 ttttactcat tgaaacttaa gcctttgtgt tacagcgcag ggtaagcgct gataaaagat
    12181 ggcatgattt ctgctgtcag aaagggatga gcaggcaaag aagaagatgc gttttatgca
    12241 acgttctaaa gactccttag ctaaatggtt aagcgcgatc ctccccgtgg tcattgttgg
    12301 gctggtgggg ctgtttgcgg tgacggtgat tcgcgattat gggcgtgaga ctgccgccgc
    12361 cagacaaacg ctgctggaaa aaggcagtgt acttattcgc gctcttgaat ccggctcgcg
    12421 cgtcggcatg gggatgcgca tgcatcatgc gcagcagcag gccttactgg aagaaatggc
    12481 cgggcagcct ggagtacgtt ggtttgcggt cacggatgaa caaggaacaa tcgtgatgca
    12541 tagcaactcc ggcatggtgg gaaaacagct ttattccccg caggaaatgc agcagttaca
    12601 tccgggagat gaagaagtgt ggcggcggat cgatagcgca gacggcgagc ctgttctgga
    12661 aatttatcgc cagtttcaac cgatgtttgc tgctggaatg caccggatgc gccatatgca
    12721 gcagtatgcc gcgacaccac aagcaatttt catcgctttc gacgccagta atattgtgag
    12781 tgccgaagat cgtgagcaga gaaacaccct gattatcctc ttcgccctag cgacggtctt
    12841 gctggcaagc gtgttgtcat tcttctggta tcgccgctat ctgcgctcgc gccagctgtt
    12901 gcaagatgaa atgaagcgca aagagaagct ggtggcgttg gggcatcttg cggcaggcgt
    12961 tgcccacgaa atccgtaatc cactttcctc gattaaagga ctggcgaaat actttgccga
    13021 gcgcgcgcct gcaggaggag aagcgcatca actggcgcag gtgatggcga aagaagctga
    13081 ccgcttaaac cgcgtggtaa gcgagctgct ggaactggtt aagccaacgc atctggcttt
    13141 gcaggcggtg gatctcaaca cgctgattaa ccactcatta cagctggtaa gccaggatgc
    13201 aaacagccgg gagatccagt tacgctttac cgccaacgac acattaccgg taattcaggc
    13261 cgacccggac aggctgactc aggtcctgtt gaatctctat ctcaatgcta ttcaggcgat
    13321 tggtcagcat ggtgtgatta gcgtgacggc cagcgaaagc ggcgcgggcg tgaaaatcag
    13381 cgttaccgac agcggtaagg gaattgcggc agatcagctt gaagccatct tcactccgta
    13441 cttcaccacc aaagccgaag gcaccggatt ggggctggcg gtcgtgcata atattgttga
    13501 acaacacggt ggtacaattc aggtcgcaag ccaggaggga aaaggcgcaa cgttcaccct
    13561 ctgtcttccg gtcaatatta cgcgtaagga cccacaagga tgacgcacga taatatcgat
    13621 attctggtgg tggatgatga cattagccac tgcactattt tgcaggcttt actgcgcggc
    13681 tggggctata acgtcgcgct ggcgaacagt gggcgacagg cgctggagca ggtgcgggag
    13741 cgggtttttg atcttgtgct ttgcgatgtg cgaatggcgg agatggacgg cattgccacg
    13801 ctaaaagaga tcaaagcgtt aaatccggcg attccggtac tgattatgac cgcgtactcc
    13861 agcgtcgaga cggcggtaga agcgttgaaa accggggcgc tggattatct catcaagccg
    13921 ctggatttcg ataacctgca ggcgacgctg gaaaaggcgc tcgcgcatac gcacagtatt
    13981 gatgctgaaa cgcctgcggt gactgccagc cagttcggta tggtcggtaa aagcccggcg
    14041 atgcaacacc tgctcagtga aatcgccctc gtcgcgccat cggaagccac ggtgctgatc
    14101 cacggcgatt ccggcaccgg taaagagctg gtcgccaggg cgattcacgc cagtagcgca
    14161 cgtagcgaaa aaccgctggt aacgctcaac tgtgcggcac tcaacgaatc cttgctggaa
    14221 tctgaattgt tcggtcacga aaaaggggcg tttactggag ccgataaacg ccgggaaggg
    14281 cgctttgttg aggcggacgg cggcacgctg tttctcgatg aaattggcga tatctcgccg
    14341 atgatgcagg tgcgtctgct gcgtgcgatt caggagcgtg aagttcagcg tgtcggtagc
    14401 aaccagacta tctcggttga tgtccggctg attgcggcga cccatcgcga tcttgccgca
    14461 gaggtaaagg ccgggcgttt tcgccaggat ctctactatc gcctgaacgt ggtggcgatt
    14521 gaagtaccgt cgctgcggca acggcgggag gatatccctc tgctggctgg ccattttctt
    14581 cagcgctttg ccgagcgtaa tcgcaaggcg gtaaaaggct ttacgccaca ggcgatggat
    14641 ttgctgatcc actacgactg gccgggaaat attcgtgaac tggaaaacgc ggtggaacgg
    14701 gcggtggtgc tgctgaccgg ggaatatatt tccgaacgcg agctgccgct ggcgattgcc
    14761 ggtacgccga tcccgctggg gcaaagtcag gatattcagc cgctggtgga agtcgaaaaa
    14821 gaagtgattc tggcggcact ggagaaaacg ggcggcaaca aaaccgaagc cgcccgtcag
    14881 ttagggatca cgcgcaaaac gctattggca aaactgtcgc gttagttctg ctcgcgttcg
    14941 atagcgcgcc agccgatatc tttccggcag aagcagtcgt cccagtgaat atcggtcatt
    15001 aaggcataag cgcgtttctg cgcttctgcc acggtatgac ccagcgcggt gacgcacagt
    15061 acgcgcccgc cgctggtcac tacctgctcg ttatccgcca gtttcgtgcc cgcgtggaac
    15121 actttgccgt cagccacttc ttccagcggc aggccgtgga tcacatcgcc ggtgcggtaa
    15181 tcgcccggat atccacccgc agccatcacc acgccgagag aagcacgttc atcccactct
    15241 gacgttttct cgtccagttt gccttcacag gccgccaggc agagctcaac cagatcggac
    15301 ttcatgcgca gcataatcgg ctgggtttcc ggatcgccaa agcggcagtt aaattcaata
    15361 accttcggat tgccctgttt gtcgatcatc aggcccgcgt agagaaaacc ggtgtaggtg
    15421 ttgccttccg ccgccatgcc tttcacggtt ggccagataa tacgttccat ggtgcgctga
    15481 tgaacttcat cggttactac cggcgcgggg gagtaagcgc ccatcccgcc cgtgtttggt
    15541 ccggtatctt tatcgcctac gcgtttgtga tcctggctgg tagccatcgg cagcacatgc
    15601 tcgccgtcca ccatcacgat aaagctcgct tcttcgccat cgaggaactc ttcgataacg
    15661 atgcgatgac ccgcgtcgcc aaaagcgttg cccgccagca tatcgtgaac agccgcttcc
    15721 gcttcttcca gcgtcatcgc cacgataacg cctttcccgg cagccagacc gtcagcttta
    15781 atgacgattg gggcaccttt ctcacgcaga tacgccagcg caggttctac ctcggtgaag
    15841 ttctggtatt ccgccgtagg aatgttatgg cgggccagga aatccttggt aaacgctttc
    15901 gagccttcca gttgcgcggc acctgcggtt gggccgaaga ttttcagccc ggcggcgcgg
    15961 aaggtatcca ccacgccttt caccagcggc gcttccgggc cgacgatggt cagatcaatc
    16021 ttttcgtttt gcgcgaaatc cagcagcgcc gggatatctg tcacgccgat agcgacgttt
    16081 tgcagcgtgg gttccagcgc agtgcctgcg ttacccggag caacaaaaac agtctcaacc
    16141 agcggcgact gggccgcttt ccaggccagc gcgtgctcgc gcccgccgtt accaatcact
    16201 aatactttca tctattgctc cattaatggc ggaagtggcg catgtcggtg aagagcatcg
    16261 caataccgtg ctcgtcggcg gcggcaatca cttcgtcatc acggatggaa ccgccaggct
    16321 ggattacgca ggtcacgccc gcagcggcgg cggcatcaat accgtcgcgg aacgggaaga
    16381 acgcgtcaga agccatcgag gaacctttca cttccaggcc ttcatcggca gctttaatac
    16441 cggcgatttt cgcggagtac acacggctca tctggcccgc gccaatgccg atagtcatat
    16501 tgtttttggc atagacgata gcgttggatt tcacgaactt cgccaccttc cagcagaaca
    16561 gcgcatcacg cagttcctgt tcgctcggct ggcgtttggt caccacgcgc agttcttccg
    16621 caccgaccat ccccagatcg cgatcctgaa ccagcagacc gccgttcacg cgtttgaaat
    16681 caagacccgg aacacgctcg ccccactgac cgcaggtcag gacgcgcacg ttctgtttgg
    16741 cggcggtgat tttcagggct tcttcgctgg cggacggcgc aataatcact tcgacaaact
    16801 gacgagaaat gatggcctgc gcggtttccg catccagctc gcggttaaag gcgataatgc
    16861 caccgaacgc ggaggtcggg tcggttttgt acgcgcgatc gtaagcatca agaatggaat
    16921 tgccgatagc cacgccgcaa gggttggcgt gcttcacaat cacacatgcc ggctcggcga
    16981 actctttcac gcactccagc gccgcatcgg tatcggcgat gttgttataa gagagggctt
    17041 taccctgaac ctgggttgcg gtagtaacag aggcttcttt cacattctct tctatataga
    17101 aggcagcctg ctggtggctg ttctcgccgt aacgcatatc ctgcttctta atgaagttca
    17161 ggttcagcgt gcgtgggaag cgaccggcgg cttctttgct ttcaccgtgg taagccggaa
    17221 ccatgctgcc gaagtagttg gcaatcatac tgtcgtaggc ggcagtgtgt tcgaaggctt
    17281 tgatggcgag gtcgaaacgg gttgcaagcg tcagcgatcc ttcgttgtca tctatctctt
    17341 taataatggc gtcgtagtcg ctgctcttca ccacgattgc gacatcttta tggttcttgg
    17401 cggcggagcg caccatcgtt gggccgccga tatcgatgtt ctcaaccgca tcttccagcg
    17461 agcaaccttc acgggccacg gtctgggcga acggatacag gttaacaacc accatatcga
    17521 taggctggat ctgatgttct tccataatgg catcgtcctg gccgcgacgg cccagaatgc
    17581 caccatgtac tttcggatgc agggtcttca cgcgtccatc catcatctcc gggaaaccgg
    17641 tgtaatcgga aacttcggtt accggcagac ctttttctgc taacagacgg gcagtgcccc
    17701 ctgtagacag cagctccaca ccgcgtgcgg aaagtgcctg ggcgaattcg acgataccgg
    17761 ctttgtcaga aacactgagc agagcgcggc ggactggacg acgttgttgc atggtaaatc
    17821 ccctggattt gactattaca gagagcgtta gctgaatttt tcgcgaaaaa ctcagctaac
    17881 gcccctaacg gggcatcctt atttttcgcc cgcattgtaa cgaaaacgtt tgcgcaacgc
    17941 tcgcgaattt ttctctttca atggtgatca caattttgac agtggttacc gtgggaaaaa
    18001 tacagaaatt acattgatga ttgtggataa ctctgtgcgt aaaaaggtat aaagcggggt
    18061 tttgctgggg aatgcagcag tcagtcattt ttctgcaatt tttctattgc ggcctgcgga
    18121 gaactcccta taatgcgcct ccatcgacac ggcggatgtg aatcacttca cacaaacagc
    18181 cggttcggtt gaagagaaaa atcctgagat tcagggttga ctctgaaaga ggaaagcgta
    18241 atatacgcca cctcgcgaca gtgagctgaa agccgcgtcg c
//
LOCUS       DAJVTL010000091        18252 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.092, whole genome shotgun sequence.
ACCESSION   DAJVTL010000091 DAJVTL010000000
VERSION     DAJVTL010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18252
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.092"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1657)
                     /locus_tag="OQQ26_002938"
     CDS             complement(<1..1657)
                     /locus_tag="OQQ26_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas3''"
                     /protein_id="HCS1858323.1"
                     /translation="MTFFDFWGKNRRGEKEGGDDYHLLCWHSLDVAAMGYLMVKSNCF
                     GLADYFRQLGFADTEQAAQFFAWLLCWHDTGKFARSFQQLYLHPQLKVPESSRKNYEK
                     ISHSTLGYWLWHHYLSECEELLPASSLSPRKLKRVIDMWMPITTGHHGRPPDRMDELD
                     NFLPEDKAAARDFLLAIKALFPLIEIPTFWDDDEGVELIKQLSWYISATVVLADWTGS
                     SARFFPRVAQAMDIKGYWQKTLVQAQNALTVFPLKAKAAPFTGINTLFPFIENPTPLQ
                     QKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLFFGLPTMATANA
                     MYDRLVKTWLSFYSPESRPSLVLAHSARTLMDRFNESLWSGDLIGSEEPDEQAFNQGC
                     AAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYM
                     SCILEGLIERQARGGNSVILLFATLSQQQRDKLVAAFARGAEGQQEAPLLGKDDYPWL
                     THVMKTDVHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQ"
     gene            complement(1895..2047)
                     /locus_tag="OQQ26_002939"
     CDS             complement(1895..2047)
                     /locus_tag="OQQ26_002939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HCS1858324.1"
                     /translation="MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVL
                     AYESKK"
     gene            complement(2312..3046)
                     /gene="cysH"
                     /locus_tag="OQQ26_002940"
     CDS             complement(2312..3046)
                     /gene="cysH"
                     /locus_tag="OQQ26_002940"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HCS1858325.1"
                     /translation="MSKLDLNALNELPKVDLILALAETNAELEKLDAEGRVAWALDNL
                     PGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
                     VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
                     RKWEPGMAEEETRFFGLKRECGLHEG"
     gene            complement(3120..4832)
                     /gene="cysI"
                     /locus_tag="OQQ26_002941"
     CDS             complement(3120..4832)
                     /gene="cysI"
                     /locus_tag="OQQ26_002941"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HCS1858326.1"
                     /translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKF
                     AGESTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
                     PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
                     TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
                     LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
                     RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
                     TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
                     LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
                     RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
                     DLWD"
     gene            complement(4832..6631)
                     /gene="cysJ"
                     /locus_tag="OQQ26_002942"
     CDS             complement(4832..6631)
                     /gene="cysJ"
                     /locus_tag="OQQ26_002942"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HCS1858327.1"
                     /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLVWVSGYFWGVL
                     NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
                     FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
                     ATGAVNEIHTSPYSKDAPLVASLSVNQKITGHNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLTGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
                     LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
                     SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGELRVFIEHNDNFRLPAN
                     PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD
                     GVLTHIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
                     LEVIAEFGGMDTEAADEFLSELRVERRYQRDVY"
     gene            6950..7312
                     /gene="queD"
                     /locus_tag="OQQ26_002943"
     CDS             6950..7312
                     /gene="queD"
                     /locus_tag="OQQ26_002943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708563.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HCS1858328.1"
                     /translation="MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
                     NPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLL
                     SAVMVKETCTAGCIYRGE"
     gene            7390..8661
                     /locus_tag="OQQ26_002944"
     CDS             7390..8661
                     /locus_tag="OQQ26_002944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HCS1858329.1"
                     /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
                     SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRA
                     RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEDANSVL
                     AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
                     FLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP
                     EGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHRE
                     PQNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKP
                     VPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL"
     gene            8652..8912
                     /locus_tag="OQQ26_002945"
     CDS             8652..8912
                     /locus_tag="OQQ26_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HCS1858330.1"
                     /translation="MSVARNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPE
                     GDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG"
     gene            8929..9504
                     /locus_tag="OQQ26_002946"
     CDS             8929..9504
                     /locus_tag="OQQ26_002946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HCS1858331.1"
                     /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
                     NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
                     FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
                     DEEDARNAINAGVVALSTTNTGVWTLAKKLL"
     gene            complement(9652..10512)
                     /locus_tag="OQQ26_002947"
                     /pseudo
     CDS             complement(9652..10512)
                     /locus_tag="OQQ26_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417249.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
     gene            complement(10509..11288)
                     /locus_tag="OQQ26_002948"
     CDS             complement(10509..11288)
                     /locus_tag="OQQ26_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005010860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HCS1858332.1"
                     /translation="MNILLAFKAEPDAGMLAEKEWQAAAQGNSGPDVSLLRSLLGADE
                     QAAAALLLAQRKNGMPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPE
                     FVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFI
                     TLEQRTEHGLRCCRIRLPAVIAVRQCGEVALPVPGMRQRMAAGIAAIIRKTVAVELPA
                     MQCLQLARAEQRRGAMLIDGQTVAEKAQKLWQDYLRQRMQS"
     gene            complement(11266..12675)
                     /locus_tag="OQQ26_002949"
     CDS             complement(11266..12675)
                     /locus_tag="OQQ26_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1858333.1"
                     /translation="MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRI
                     AALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWIS
                     DHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFS
                     PRRHRGILLGAFSVVWTVGYVLASITGHHFISENPEAWRWLLASAALPALLITLLRWG
                     TPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFN
                     SVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMFNALLIVGALLGLVLTHLLAHR
                     KFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIR
                     SLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLVGFVVTWLWAPETKA
                     LPLVAVGNVGGANEHSVSV"
     gene            complement(12697..14151)
                     /locus_tag="OQQ26_002950"
     CDS             complement(12697..14151)
                     /locus_tag="OQQ26_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HCS1858334.1"
                     /translation="MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHG
                     IYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDG
                     SAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRS
                     IGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITE
                     VTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHF
                     ADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETRFNNLNWGPDKVA
                     AERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQ
                     NGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWS
                     KLEHGSAWALLEGLKKQFDPNGIMNAGTIYPIEK"
     gene            complement(14221..15006)
                     /locus_tag="OQQ26_002951"
     CDS             complement(14221..15006)
                     /locus_tag="OQQ26_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311657.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1858335.1"
                     /translation="MSIESLNAFSMVFFSLKGKTAIVTGGNSGLGQAFAMALAKAGAN
                     VFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNA
                     GICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGG
                     QWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVL
                     EHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR"
     gene            15325..16602
                     /locus_tag="OQQ26_002952"
     CDS             15325..16602
                     /locus_tag="OQQ26_002952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1858336.1"
                     /translation="MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSN
                     TEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLIMATYPPLWVML
                     CIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFS
                     RFAPDNSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSTNNEEKQSFQLSDILAVL
                     RISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPL
                     GGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYAS
                     RGLYWACPGEARTLSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWL
                     MGMAALAMVIVFTFLLFQKIRTADSAPAMASSK"
     gene            16629..18107
                     /locus_tag="OQQ26_002953"
     CDS             16629..18107
                     /locus_tag="OQQ26_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HCS1858337.1"
                     /translation="MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDAD
                     TAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLIS
                     WQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSED
                     AAVMEKFNIPRHILFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAG
                     LLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSW
                     LRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMI
                     GFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFA
                     DVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRY
                     DAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA"
BASE COUNT         4388 a         4803 c         4566 g         4495 t
ORIGIN      
        1 cctgacttac cgccgattcg atacgcgcaa tacactcttg ttcactatgg agccaaccca
       61 cgctcacgct gcgctcaacg tctttgcgcg tcgctacccg gtgcgaatgt acatcggttt
      121 tcatgacatg cgtcagccag gggtaatcat cttttcccag gagtggggct tcttgctggc
      181 cctctgcacc acgcgcaaag gcggcgacga gtttgtcgcg ctgctgttga gataacgtag
      241 caaaaagcaa aataacgctg tttccgccac gcgcctgccg ctcgatcagc ccttcaagaa
      301 tgcacgacat gtaagcgtca caggcgtgga tctcatcagc cagcaggatt ttgttactca
      361 gccccagaag ccgcagatta ttatgtttaa acggcatcac agccatcatc gcctgatcta
      421 gggtgccgac gccaatttca gccagcaacg ccttcttgtt actgtcggca aaccaggccg
      481 cacaaccctg gttgaaagct tgttcatccg gttcttctga cccgattaaa tcaccggacc
      541 agagtgattc attaaagcgg tccattaatg tgcgggcact gtgtgccagc accaggctgg
      601 ggcgagattc tggcgaatag aaagaaagcc aggttttgac gagccgatca tacatggcat
      661 tggccgttgc cattgttggc aggccaaaaa acaaaccctg cgctttaccc gcagccatca
      721 acctgtgcgc caggataagc gccgcttccg ttttacctgc gccagtcaca tcttccagaa
      781 taaataactg tggccctggc tggctgatat ccagatccag caccttttgc tgtaacggtg
      841 tcggattctc aataaaagga aacagcgtat taattccggt gaaaggcgcg gcttttgctt
      901 ttagaggaaa gacggttaag gcgttttgag cctgaactaa agttttctgc cagtaacctt
      961 taatatccat tgcctgtgca acgcgtggaa aaaaccgcgc tgacgatccc gtccagtctg
     1021 cgagtacgac ggttgcagag atataccagg aaagttgttt tatgagttca acgccctcgt
     1081 catcatccca gaatgtaggg atctcgatga gcggaaacag tgccttgatt gcaaggagaa
     1141 aatctcgtgc ggcagctttg tcttctggca gaaagttgtc cagttcatcc atacggtcag
     1201 gaggccgacc atgatgcccg gtagttatgg gcatccacat atctattacc cgtttgagct
     1261 tgcgcggaga gagtgaagat gcaggaagca attcttcgca ttcacttaaa taatggtgcc
     1321 acaaccagta acccagcgtt gaatgagaga ttttttcgta attttttcta gagctttccg
     1381 gaaccttgag ttgcgggtgc aggtaaagtt gctgaaaaga gcgggcaaat tttccagtat
     1441 cgtgccagca cagcaaccag gcgaaaaatt gagctgcctg ctccgtatca gcgaaaccta
     1501 gttgacgaaa atagtcagcc agcccgaagc aattgctttt aaccattaaa tagcccatcg
     1561 cggctacatc cagcgaatgc cagcaaagaa ggtgatagtc gtcaccaccc tctttctcgc
     1621 cacgtcggtt ttttccccag aaatcaaaga aagtcacaat gtttttatcc ttcagtaaaa
     1681 cttaaaggat atttacgcat atattaaaaa ttatctgtga tatatatcgt tcaataaaat
     1741 atttacatta tgaataatca aatgattttc atccgtaata tatatgaata ataaacatag
     1801 gcataatatt cacataaacc atataaatta aaaaagggtg caggagacca aactatcaca
     1861 atccaatacg cggggtttta cccccgcgtg gtggctactt cttcgattcg taagcgagaa
     1921 ctgccttaaa ctccatacca cgttctctga tactcaactc acacaacgag tcgcctacca
     1981 tcagcgtgaa tcccagtact gtacaacaca gtacgatgat tgccacaagg gcatattttg
     2041 tcagcatgtc ttgcctccct gcaaagaaga gactaacatc cgaattgctt aggttcgaac
     2101 gctggcttca ggttgatagc aatatcgcct ggggcttttg tccatctgga acctcgcgaa
     2161 tgcttaacgc cagacagcct caagcacccg acgccattct atacctgata attcttccag
     2221 cggcgttcac gtttaaaatc aggaatgctg ctcgcaaaat aaaaacgccc ccatcatttc
     2281 tgacagaggc gtttaattta tccggcaata tttacccttc gtgtaaccca cattcccttt
     2341 ttaagccaaa gaaacgcgtt tcttcttccg ccatgccggg ttcccattta cgggttgtat
     2401 gggtatcgcc caccgataaa tatccttcat cccataatgg gtgatatttc aggccatgtt
     2461 tttgcaggta ctgataaata gttcggttat cccaatcgat aatcggcagc actttaaata
     2521 cgccacgctg aattgccagc accggtaaat tggcacggct gccggattgt tcacgccgca
     2581 ggccagcaaa ccacgtttgc gcattcagtt ctttcagcgc ccggttcatc ggttcgactt
     2641 tgttgatgtc attgtacttt tcaatgcctt caacgccctg ttcccacagt ttgccgtagc
     2701 gtgcttcctg ccaggcggcg ctttcggtag cgcggtacac tttcaggttg agcttgagtt
     2761 tgtccgttaa ctcgtcaata aagcggtagg tttccgggaa cagatagccg gtgtcggtga
     2821 ggatcaccgg aatatccggg tgaatctgat tcaccagatg caggctcacc gccgcctgaa
     2881 tgccaaagct ggaagaaagt acatattcac cgggcagatt atccagcgcc caggcaacgc
     2941 ggccttcagc gtccagtttt tccagttcgg cgttagtttc tgccagcgcc agaatgagat
     3001 ctaccttcgg cagttcgttc agggcgttta gatcgagttt ggacatagat tcctcactgt
     3061 ttgccttgcc tgatgcgacg ctcacgcgtc ttatcaggcc tacaagaccg ggctgatggt
     3121 taatcccaca aatcgcgcgc cggatcgagc accgggcgaa tgatgcccgc acgcaccgta
     3181 aagtcgccga agccttcacc cgcttcgcgc tctttcgccc agcgccctat cagttcatca
     3241 agcgacgcta ggatttccgg ctcggtgatg ttttctttat acatccgtgg gatacgtgtc
     3301 ccaatgcggt tgccgccaag atgcaggttg tagcgacccg gtgctttacc caccaggccc
     3361 acttccgcca gcatcgcgcg accacaaccg ttcgggcagc ctgttacacg catcacgata
     3421 tgctcatcgc tgacaccatg tttcgccatt aaattatcga tgttgtcgat aaaagacggc
     3481 aggaaacgct ccgcttccgc catcgccagc gggcaagtcg ggaatgacac gcaggccatc
     3541 gagttttcac gctgcggcgt gacggcattc attaacccgc tctctttggc gatcttctcg
     3601 atcttcgctt tctcgctttc cggcacaccg gcgatgatca gattctggtt cgccgtaatg
     3661 cggaaatcac ctttgtggat ctttgcgatc tccagcaggc cggttttcag cggacgcccc
     3721 ggataatcaa ggatgcgacc attttcgata aacagcgtca ggtgccagtt atcatcaatg
     3781 cccttaaccc agccaatacg atctccacgt ccggtgaact catacggacg gatcggttca
     3841 aatttgatcc ccgcgcgacg ctccacttcc gctttaaacg tctcaactcc cactcgctcc
     3901 agcgtgtatt tggttttggc atttttacga tcggttcggt taccccagtc acgctgagtt
     3961 gtcacgacag cttccgccac cgccagcgta tgctccagcg gcagatagcc aaactcgctt
     4021 gcggtgcggg cgtaggtttt cttgttgccg tgttcgatag aaagcccacc acccaccagc
     4081 aagttgaagc ccaccagctt gccgttttcg gcgatcgcca cgaagttcat gtcgttggca
     4141 tgcagatcga tatcgttctg cggcgggatc actaccgtgg ttttgaattt acgcggcaaa
     4201 taagtctgac cgaggatcgg ttcttcatcg gtggtggcga ctttttcctg atcgagccag
     4261 atctccgcat acgcgcgggt acgcggcagc agatgttcag agattttctt cgcccattca
     4321 tacgcttccg cgtgcagctg cgactcgtaa gggttcgagg tgcagagtac gttacggttc
     4381 atgtcgttag cggtcgccag cgcatcaaga ccgaccgagt gcagcatctg atgcaccggt
     4441 ttgacgttct ttttcagaat gccgtggaac tgaaacgtct ggcggttggt caggcgaatg
     4501 ctgccataga tggtgctttc accggcaaat ttatcgatcg cctgccactg tttagtggta
     4561 atcaccccac ccggcagacg gcagcgcaac agcatcgcgt ggcgcggctc cagcttctgt
     4621 tcagcacgtt cggcgcggat gtcgcggtca tcctgctgat acatgccgtg gaagcggatc
     4681 agcaggaagt tatcgccctt aaagccgccg gtcaggccgt cgtttaaatc ttccgcaata
     4741 gtgccgcgca ggtagttgct ttcaagcttc atgcgctcgg cgtctgtcag ttttccttcg
     4801 accactaaag gccctggatg tttttcgctc attagtagac atctcgctga taacggcgct
     4861 ctacgcgcag ctcacttaaa aattcatccg ccgcttcggt gtccatgcca ccaaattcgg
     4921 caatcacttc cagaagtgcc tgctcaacgt ctttcgccat gcgattagcg tcgccgcaga
     4981 cataaatgtg ggcaccatca ttgatccagc gccacagctc cgcgccctgt tcgcgcagtt
     5041 tgtcttgtac gtaaactttt tctttttgat cgcgcgacca ggcaagatcg atatgtgtca
     5101 gcacgccatc tttgacgtag cgctgccact ccacctggta gaggaaatct tccgtaaaat
     5161 gcgggttgcc aaagaacagc cagtttttac ccggtgcttc atcggcagca cgttgctgca
     5221 taaaggcgcg gaacggcgcg atgccggtac cggggccaat cataatcact ggcgtttccg
     5281 ggttagcggg caggcggaag ttatcgttat gttcgataaa tacgcggagt tcgccctctt
     5341 cttccacgcg gtccgcaagg aagctggagg cccccccggc acgggcgcgg ccttccacgt
     5401 cgtaacgcac cacaccaacg gtgacgtgta cttcgttctc gacttccgcc tgcgaggagg
     5461 cgatggaata cagacgcggc gtcagcgggc gcagcagatt aattagcgct tcggcatcaa
     5521 gctgtgccgg ggagaaacgc accatgtcaa caatcggcgt cgtcgcggcg taatgctgta
     5581 acttcgcttt atcgcccacc agcggcagca gtgtttcact gcgggtaagc gtggcgtaat
     5641 tctcaacaat gttggcggtg ttgacggtca gttcgaagtg ccactgtagc gcttcgttca
     5701 gaggcaacgt tttgccctcg acggtgacag gttcatcgcc tgtcagccac agcagttcga
     5761 caagttcttt caccagtgcc ggatcgttct gataccagac gcccagcgcg tcacccggct
     5821 ggtaacgcag gcccgagtcg cctaagtcaa tttcgatatg gcgaacgtct ttttcagagt
     5881 tatgcccggt aattttctgg ttaacagaga ggctagccac cagcggcgcg tctttgctgt
     5941 acgggctggt gtggatttca tttaccgcgc cagtagcgac ggattgcgaa ggtgccgcga
     6001 caggcgcacg cgatttaagc gcatcaacca cgcgggcgcg ccactcgctg gcagcagcct
     6061 ggtattcaac atcggcatcg acacggtcga gcaggcgttc accgcccagt tccgccagct
     6121 tgctgtcgaa atctttcccg gactggcaga aaaattcata agagctatcg ccgaggctaa
     6181 acacggcaaa cgcggtgttt tccagctttg gcgctttttt ggagaacagg aacttatgca
     6241 gcgcgacggc ttcttccggc ggttcccctt ccccttgcgt tgacgtcact acgatgagca
     6301 gtttttcgct ggcgatttgt ttgaatttat agtcgcccgc gttcaccagc ttaacgttca
     6361 gttttgctgc taataaatca tcgcgtaatg cttcagcaac ccggcgcgca ttgccggttt
     6421 gcgaggcgga gataatagtt atacccggca tttctgcggc tggcgctggc gtcgctgcaa
     6481 gcgcagcagg ctgctgattg agtacgcccc agaaatagcc agaaacccag acaagctggg
     6541 taggcgttaa atcggtcgtg gccgcctgaa ggcgtgccag ttgctccggg ttcaacggaa
     6601 gcaacgcgga aggtgggacc tgtgtcgtca tgcgtcgtta tgttccagta agcaaagctg
     6661 tttctgcgcc ctgtcagcgc ccataaaaca gaagagaagg taaggttaac ggggtgaacg
     6721 gtgtggatta aagacgggat agcgataact aataaccaaa tcgactaacc tgttttagca
     6781 atagtcttta acaacaaaat agattaacca acctaatgaa aaacaaatga atattgccca
     6841 tcaataagat aaatcagcga ttttgcgcaa caaagccgtt ttagataatg cgaaaaaaca
     6901 gcctttccgg tactctacgg cggttttatc gtcatgtaga gaaattatga tgtccaccac
     6961 gttatttaaa gatttcacct tcgaagccgc tcaccgctta ccacacgtcc cggaagggca
     7021 taaatgtggt cgcctgcacg ggcattcctt tatggtgcga ctggaaatta ccggggaagt
     7081 caatccgcat acgggctgga ttatcgattt cgctgaactg aaagcggcgt ttaagccaac
     7141 ttatgagcgc ctcgatcacc attatctcaa tgatattcca ggtctggaaa acccaaccag
     7201 cgaagtttta gcaaaatgga tttgggatca ggttaaaccc gttgtgccgc tgttaagtgc
     7261 ggtgatggta aaagaaacct gcaccgcagg gtgtatctat cgcggcgaat gataagagtg
     7321 tgtcggcggt caatttccct taagtaacgc tatgttaggg tgttgtgttc tggatatctg
     7381 gggcatgaca tggaagacga ctgcgacatt attattattg gtgccggtat tgcaggcacc
     7441 gcttgcgcgt tacgctgcgc gcgagcgggt ttatccgttt tgttactgga acgcgctgaa
     7501 atccccggca gcaaaaatct ttccggcggg cggttatata cccatgcact cgcggaactc
     7561 ctcccgcaat ttcatctgac cgcgcctctt gaacgacgca tcactcacga aagcctttcc
     7621 ctgttaacgc ccgatggcgt aacgacgttt tccagcttac agcccggcgg tgaatcctgg
     7681 agtgtattac gtgcacggtt cgatccgtgg ctggttgccg aagccgaaaa agaaggtgtc
     7741 gaatgcatcc ccggagcgac ggtggatgca ctgtatgaag aaaacggcag agtctgtggc
     7801 gttatttgtg gtgacgatat tctccgcgcc cgttatgtgg tgctggcaga agatgccaac
     7861 agcgtcctgg ctgaacgtca cgggttagtg actcgtcctg ctggcgaagc gatggcgttg
     7921 gggatcaaag aagtgctgtc gctggaaaca tccgctattg aagaacgttt tcatctggag
     7981 aataacgaag gcgcagcgtt gctgttcagc ggcggaatct gtgatgactt acccggcggc
     8041 gcatttcttt atactaatca acaaacgctc tcgttaggga ttgtttgccc gctctcttcc
     8101 cttacgcaaa gtcgtgttcc ggcaagcgag ctgctgactc gctttaaagc gcatccggca
     8161 gtgcgcccgc ttatcaaaaa cacggaatca ctggagtatg gtgcgcatct ggtgccagaa
     8221 ggtggcttgc acagtatgcc ggtgcaatac gccggtaacg gctggctgct ggtgggcgat
     8281 gcgttgcgca gttgcgtcaa taccggaatt tccgtgcgcg gcatggatat ggcgctgact
     8341 ggcgcacagg cggcggcaca aacgctaata agcgcctgcc agcaccgcga gccgcaaaat
     8401 ctgtttgcgc tttatcatca caacgtagag cgcagcctgc tatgggatgt tctacaacgt
     8461 tatcagcatg ttccggcgct tttgcaacgc cctggctggt atcgggcgtg gcctgcgtta
     8521 atgcaggata tttcccgcga tttatgggat cagggtgata aacctgttcc accgctgcgc
     8581 cagttattct ggcgtcattt gcgtcgtcat ggcctgtggc atctggcggg cgatgttatc
     8641 aggagtctgc gatgtctgta gcccgtaatc tctggcgcgt tgctgatgcg ccgcacattg
     8701 ttccggctga ctccgttgag cgtcagatgg tacaacggtt gattaacgcc tgtccggcag
     8761 gtcttttttc gctcacaccg gaaggtgact tacgcgttga ttatcacggc tgcctggagt
     8821 gtggcacctg ccgtttgctg tgcgacgaat ccacactaca acagtggcgc tatccgcctt
     8881 ccggattcgg catcacctac cgctttggat aaataataag gataatttat gcccctctta
     8941 cacctgctcc gccagaatcc ggtgattgct gccgttaaag ataatgccag cctgcaactg
     9001 gcaatcgact ctgaatgcca gtttatttcc gtgttgtacg gcaatatctg caccatcagt
     9061 aatatcgtta aaaagattaa gaacgccggg aaatatgctt ttattcatgt tgatttgctg
     9121 gaaggcgcgt caaataaaga agtcgtgatt cagtttttga aactggtgac cgaggcggac
     9181 ggcattatca gtaccaaagc ctcaatgttg aaagcggcaa gagcggaagg ttttttctgt
     9241 attcatcgcc tgtttattgt tgattcaatt tcgtttcaca acattgataa gcaagttgcg
     9301 caatcgaatc cggattgtat tgagatcctg ccaggctgta tgcccaaagt gctgggctgg
     9361 gtgacggaga aaatccgcca accgctgatt gccggtgggc tggtgtgcga tgaagaagat
     9421 gcgcgtaatg cgattaacgc gggtgtcgtg gcgctttcca ccacgaatac cggggtctgg
     9481 acgttagcga aaaaattact ttgacgggat aatcgtaacc aattgaattt ggtttgattt
     9541 gtaggccgca cgccacatcc gacattcagc gcctgatgcg acgcttgacg cgtcttatca
     9601 ggcctacaag tccccaggcc agaaccgtag gcaggatcat ccggcaacac gttattggca
     9661 atctgcgtga atgtttgtca ccagtgcctc cagcaccact ttccagtcat caaccacgcc
     9721 aacatctgcc tgtgaaaata ccgcagcgct ggcgtcatga ttaatcgcca ccacaaactt
     9781 gctattgcgc acgcccgcca ttaacgctgc tgcgccagaa gcgccaacga caatacacac
     9841 ctcaggtgcc agcagatgtc cggaaatacc aatcactttt tcagcatcaa cgccaccgtt
     9901 catcactcgc gcccgactgt agcccacttc ggctcccagc ttttctgcca gcatagcgat
     9961 ttcctggtta tctgcctctc cgccctgccc caccaccagc acccgtctgg cttcagctaa
    10021 tgggtcgcgg gtaacatttt tcagatcctc tgtgctaacc agccagtcgg gaagcgcacc
    10081 tgggacaatg ttcagttgtt gcattccaga gggcaacgtg gcgtttttct ctgctcccgc
    10141 ctgacgcgcc agggaaaggc ataacgggcg tttttctgtt tgcagcgtcg ccgttaacgc
    10201 atttccccag tgggatttgc gcacgcttac ggttggaata tctaacgaag tcacctggca
    10261 gatgcttgca ccatgtaaac gcctggccag ccgggtcgac agttcatcgc caaacgttcc
    10321 cggcggaaag agaacaacgt ccgcaggcgt tcgctgccac tgttccacca acgcatccag
    10381 cacctgttcc gccactacgg gctgaggttc aatctgccag tgcgccaggg tacaaccact
    10441 gaaatcctgc gccgccagcc agctcgctat tgcggcattc tcctaattta ttgtcacaat
    10501 tgcgatattc atgactgcat cctttggcgt aaatagtcct gccatagctt ttgcgctttt
    10561 tctgctaccg tttgcccatc aatcagcatc gctccgcgtc gttgctctgc tcttgccagt
    10621 tgcagacact gcatcgctgg caattcgaca gcaacagttt tacggataat tgctgctatc
    10681 cccgcagcca ttcgctggcg cattcccggt actggcaagg ccacttcacc acactgacgc
    10741 acggcaatca ccgcaggcaa gcgaatccga caacagcgca gcccatgttc agtacgctgt
    10801 tcgagggtga taaacggcgc gtcgagagtg aaacgctcca cctgggtgaa gcagggccag
    10861 cccagcattt ccgccagcaa aaatggcgtt tgcccattct gcccttcgct gctttggcag
    10921 ccagtaatta tcagatccag cggattctga cgctgccatt cggcaatatg gcgagcgaca
    10981 aattccggcg caaagcgcag atctgccgcc gtctccagca atacagcttc ctcaaaccca
    11041 agagccatga gatagcgcag ccagtgcaac gcccgttcat cccccatgct caacgcggtt
    11101 aaagacatcg gcataccgtt ttttctctgc gccaacagca gcgcggcggc agcctgttca
    11161 tcagcaccga gtaaacttcg cagtagcgaa acatccggtc cgctattacc ctgagccgcc
    11221 gcctgccact ctttttccgc cagcattccg gcatccggtt cggctttaaa cgctaacaga
    11281 atgttcattc gcacctccta catttcccac cgccaccagc gggagtgctt tggtttctgg
    11341 tgcccatagc caggtcacaa caaaaccaac caacaacact gccgccagga gcaataaggt
    11401 gacttgcatt ccccactgcg ccagcaccca cggcagcagg ccagtactta ccgccgcgcc
    11461 caaccgactc atggcggtgg caaaaccgac gcccagcgag cgaatgtcag taggaaaact
    11521 ttccgcaggc aaaatgccca ccagattact gactgccgaa atggtggtgc tgaagagaac
    11581 aaaaagcagc agcgttaatg aactgccgga aggcaaacag gccattacta ccagcgttgc
    11641 cgccagcagc aaaaaacttc ccagcaaaaa tttgcgatgt gccagcaggt gcgtcagaac
    11701 taatcccagc agcgcgccca caattaacaa cgcattaaac atcaggctgg cagtcagcgc
    11761 atcttccaga ccaatagtct gggcgatagt tggcagccag gtataaatca caaaccatgg
    11821 gattacgagg cagacaaaga agacgctgtt aaacgccgtg cgccgccagt aacgcgaaga
    11881 gaacaaggtt ttgatgtgtt tatgggtcgc cgttgccact tcatcgccca gtaaaacatg
    11941 gggaccaaaa tagcgatgca cgatagcgtg agcttctgca aaacgcccct ggcgcagtag
    12001 ccaacgtggc gattctggcg ttccccagcg taataacgta atcaacaacg cgggcagagc
    12061 tgccgatgcc agcaaccagc gccaggcctc cgggttttcg gaaataaagt gatgtccggt
    12121 aatacttgcc agcacataac ctacggtcca caccacgctg aatgcgccca gcaaaatacc
    12181 gcgatggcgg cgcggggaaa attcagccag caaggtgtga ccaactgagt aatcgcctcc
    12241 cagcccaatg ccgatcaaaa tgcgcagccc aataagatgc tctggcgtgg tggcaaaaaa
    12301 ttgcaagaac gaagcgagcg taatcagcaa aaagctgaag gtgaagattt tttgccgacc
    12361 aatatggtcg gagatccacc caagaaccag gctgccaagg aacaaaccaa ggagcgccga
    12421 gccgccgatc attcccgcca taaacggcgt cagttgcatg gcgggcgtaa gctgaataat
    12481 ggcgtaacca atgacgccga gaacataacc gtcggtcagg tgtgcgccga aagtgagcgc
    12541 agcaatgcgg cagtgaaaac ggttaagcgg taaatcatcc attcgcaccg gtgaagtgtt
    12601 catctttacc ccttcattgt ccggtaataa gaacggcttc tcacctgaga agccgaaaag
    12661 gcaacgcccc gtcatcacgg gacgctgcct gacacattat ttttcaatcg gatagatagt
    12721 acccgcgttc ataatgccgt taggatcgaa ctgctttttc agcccttcca gcaacgccca
    12781 cgcgctgccg tgttccagtt tgctccagtg aacgcgatgt ttaccgatac cgtggtggtg
    12841 caccatcgaa ccaccgaggc gaatggtttc ttcgcaaatg attttgttga gcggattgtg
    12901 gtacttgtcg atttcctctt ccggcttaca gtcgacaacg ttgtagtcgt agacgaagta
    12961 catgttggtg ccgttctgat agctatgaga ggagtgaccg cccagcatag tgatgtcgtc
    13021 ggcgtgcggg aactcggtac gaatacggtt aataacactt tcgtagattt cgtggatgca
    13081 gctccagcag ccggacactt cggtggtaaa gcccatgttg ccggttttga ggatctgcac
    13141 acgttcggca gccactttat ccggtcccca gttcaggttg ttaaacctgg tttcgatcag
    13201 cttgctgtcc acgcgctggc attgcgggta gcgggcaacg atttccgcaa tcccttcgcc
    13261 cgtcgccttc gcaatgcgag ggttaccttc agccataaag atcagcacgc attttccgtc
    13321 ggcaaaatgg gtgaagtgtt gggtgccatc ttcagcgtca tacaaacgag cgatcgacgg
    13381 acgataccct tccaccatga tttcacgcag gatgttgaag ccggttttca tgtcttccag
    13441 gatatagccg tagaagaggt tgttttccgg ggtgaattta aagattttca ctgttacttc
    13501 agtgatatag cacaatgcac cttcgttgcc gatgatgatg tgacgaatgt ccgggccagc
    13561 cgcgcggcgt ggcacgtttt taatgcgtgt gacggtgcca tcagccaata ctgcttccag
    13621 accaacgacc atatcttcga ttgcgccgta gagtgtggag aactgcccga tactgcgggt
    13681 tgctaccagg ccgcccatct gcgccagcgg ctttgactgc ggagaatgcc ccgtggtgta
    13741 acctttttca cgcaacgcgt tttccagcac ctccagcgga acgccacatt gcgccgtcgc
    13801 ctgcatattc tcaatatcaa tattaatgat ttgattcatg gcggaaccgt cgagcaccac
    13861 cgagttttct acaacagttt ccagcccacc ttcggtggcg gaagcaccgg tacgcggcac
    13921 accgttaatt ttgtgcgcat tcataaaatt cagcacacgg gatacttgct ctgtggaacc
    13981 gagttttacg accgctgccg gaatcggcaa agtataaatg ccatgaatat ccggaaattt
    14041 acgaaaacgg tcaatactgt tcttctttaa tactgtttca tcggtaatta cgcgatctgc
    14101 accaacaatt tcctttagct ggtcgacaat cgctgcgcga gataaagaca tagtaattcc
    14161 ttcctgataa taaaaatgga ataatcatta ataagagaaa acagaaacca ccgttatggg
    14221 ttagcgcact aaataaccgc catcaaccac taataaatgc ccgttgacat aattcgatgc
    14281 cggacttgcg aggaatacgg ctgcgcccat taaatcctga gtatcgcccc aacggtttgc
    14341 cggaatatgt tcaagaacgc gctgattggt ttctggatta ctgcgtgtcg ccagcgtaat
    14401 atctgttgca taataacctg gagcaatacc atttacctga atattatatt gacctagttc
    14461 atcacaataa gctttggtga acccggcaag agcatgttta gtggcagaat atgcaggtga
    14521 ccattgtcca cctaagtaag agaataatga acagatatta atgattttac cgcttttctg
    14581 cgggatcata atttttgccg cttcatagct taactcgaat gcggcggtca ggttcacatc
    14641 aatcatcggg tcccagtcgg cacgaccgaa gtccagcacc ttattcagct tacaaatacc
    14701 ggcattgtta accagaatat cgacggtacc gaaacgttcg caacaggcgg cgattatctt
    14761 ctgcggcgcg ccttctgcgg tgatatccac ctgcatgaag tccacctcaa caccctgttt
    14821 ttcaatcatt tcctttgttt cgccgttatc tttgacaaaa cttggaataa agacatttgc
    14881 gcctgctttg gccaacgcca tggcaaatgc ctggcctaaa ccgctattcc caccggtaac
    14941 aattgcggtt ttacctttca gggagaaaaa aaccattgag aacgcattga gagattcgat
    15001 tgacatagtt agctccaatt tccgtaaggc aaaaaaaaag aaaggtaact tcccccgcga
    15061 gagggaagtt acctttctca ttatctctgg taactggaga taatttttag cataaggaca
    15121 taactgctaa tgtgatcgta atcacagtgt gatattcgca ttatcaaata gttttaaaaa
    15181 gcagaagcgt gattactctc acacaacacc tctgctttcc atgttattta ttatttcaat
    15241 tactagagac ctgagaaaag taatccacct gaaagggagg cttacttttc tctttttttt
    15301 gtctattaca aatgggaata cgatatgcaa cacaactcat atcgccgttg gataaccctc
    15361 gcgataatta gttttagcgg cggcgttagt ttcgacctgg cttatttacg ttatatttat
    15421 caaattccca tggcgaaatt tatgggattc agcaataccg agataggttt aataatgagt
    15481 acctttggta ttgcggctat tattctttat gcccccagcg gcgttattgc cgataaattt
    15541 tcacaccgca aaatgattac ttccgcgatg atcattaccg gattgctggg cctgataatg
    15601 gcaacatatc caccactgtg ggtaatgctc tgtattcagg tcgcctttgc gataacgacg
    15661 attttaatgc tgtggtcggt gtcgattaaa gccgcctcat tgctgggcga tcatagtgag
    15721 caagggaaaa ttatgggctg gatggaaggg ctgcgcggcg tcggtgtaat gtcgctggcg
    15781 gtgtttacca tgtgggtctt ttctcgcttt gcaccggata acagcgccag cctgaaaaca
    15841 gtcattatta tctacagtgt ggtttacatc ttgttgggga ttctgtgctg gttttttgtt
    15901 agtgataaca acaacctgcg cagtaccaat aacgaagaaa aacagtcatt ccagcttagc
    15961 gatatcctgg ccgttttgcg tatcagtacc acctggtatt gcagcatggt gatttttggt
    16021 gtcttcacca tctacgccat tctgagttac tccaccaact atctgaccga aatgtacggc
    16081 atgtcgctgg tggcggcgag ctacatgggg attgtgatca acaaaatctt ccgcgcgctg
    16141 tgcggcccac ttggcggcat tatcaccacc tacagtaaag tgaaatcccc aacccgcgtg
    16201 atccaaatcc tttccgtact cggcctgctg gcgttaactg ccctgcttgt taccaactct
    16261 aacccacaat cggtcgcgat ggggattggc ctgattttac tgctgggatt cacctgttac
    16321 gcctcacgcg ggctgtactg ggcctgccct ggcgaagcga gaacactgtc ttacattatg
    16381 ggcaccacgg taggtatttg ttcggtgatt ggattcctgc cggatgtctt cgtttacccc
    16441 attatcggcc actggcaaga caccctgccc gcagcagaag cctaccgcaa tatgtggctg
    16501 atgggcatgg cggcgcttgc catggtgatc gtctttacct ttttgctgtt ccaaaaaatt
    16561 cgtactgctg atagcgcccc cgcaatggct agcagcaagt aagccaggaa aattacagga
    16621 gaaaaatcat gtcgaaaaaa tacatcatag ggattgatgg cggaagtcag agcacaaaag
    16681 tggtgatgta cgatctggaa ggtaatgtgg tttgcgaagg gaaaggctta ttgcagccga
    16741 tgcacacgcc agatgccgat actgcagaac atcctgacga cgatttatgg gcatcattat
    16801 gttttgccgg tcacgatttg atgagtcagt ttgccgggaa taaagaagat attgtcggta
    16861 ttggtctggg atccatccgt tgctgccgtg cgttattgaa agccgatggc acgcccgctg
    16921 cgccgttgat tagctggcag gatgcacgcg taacgcgtcc ctacgaacac actaatcctg
    16981 acgtggcata tgtcacgtct ttttcgggtt atctgacgca tcgcttaacc ggcgagttta
    17041 aagacaatat cgccaactat tttggtcagt ggccggtgga ttataagagc tgggcatgga
    17101 gcgaagatgc tgcggtaatg gagaagttta atatcccccg tcatatactg tttgatgtgc
    17161 aaatgccagg cactgttctt gggcatatca caccacaagc cgcgctggcg acacatttcc
    17221 cagctgggct gccggttgtt tgtaccacca gtgataaacc ggtagaagct ctgggggccg
    17281 gattactgga tgatgaaacg gcggtgattt cactcggtac ttatatcgcg ctgatgatga
    17341 acggcaaagc cttgccgaaa gatccggtgg cgtactggcc gattatgtct tctattccgc
    17401 aaacattgct gtatgaaggt tacggtattc gcaaaggtat gtggacggtg agctggctgc
    17461 gcgacatgtt aggcgagtcg ttaattcagg atgccagggc gcaggatctt tcaccggaag
    17521 atttactcaa caagaaagcc tctagtgtgc cacctggctg taatgggctg atgacggtgc
    17581 tggattggct gaccaatccg tgggaaccgt acaaacgcgg gattatgatc ggctttgatt
    17641 ccagcatgga ttacgcatgg atatatcgtt cgatactgga aagcgtggcg ctgacgctga
    17701 agaacaatta cgacaatatg tgtaatgaaa tgaatcactt tgcgaagcat gtgatcatta
    17761 ctggcggcgg ttcgaacagc gatctgttta tgcagatttt tgccgacgtg ttcaaccttc
    17821 cggcacgacg taacgccatt aacggttgtg caagcctggg ggcagcgatt aatacagcgg
    17881 taggtctggg gctatacccg gattacgcaa cggctgtcga taacatggtt cgcgtgaaag
    17941 atatctttat accgattgag agcaatgcca aacgctacga cgcgatgaat aaaggcattt
    18001 tcaaagacct aaccaaacat actgatgtga tcctgaaaaa atcgtatgaa gtgatgcatg
    18061 gggaattggg gaatgcggat tcgatccaga gctggtcgaa tgcgtgaatg aggtaggcca
    18121 ggcggaaaac tgcccggcct gaacatacct aaatagttat ccccgctgac gcggggaaca
    18181 taagttcgac aacttaaaaa atgataacaa gtccggttta tccccgctga tgcagggaac
    18241 ataataaaaa ct
//
LOCUS       DAJVTL010000092        18065 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.093, whole genome shotgun sequence.
ACCESSION   DAJVTL010000092 DAJVTL010000000
VERSION     DAJVTL010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18065
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.093"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(103..1287)
                     /locus_tag="OQQ26_002954"
     CDS             complement(103..1287)
                     /locus_tag="OQQ26_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001218899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1858338.1"
                     /translation="MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRF
                     AGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEA
                     IAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGA
                     LEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLND
                     LAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVP
                     LSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRH
                     TMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYLDGRREMMQWYADYIDSLSSR
                     ES"
     gene            complement(1587..1681)
                     /locus_tag="OQQ26_002955"
     tRNA            complement(1587..1681)
                     /locus_tag="OQQ26_002955"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1645..1647),aa:Sec,seq:tca)
     gene            1974..3356
                     /locus_tag="OQQ26_002956"
     CDS             1974..3356
                     /locus_tag="OQQ26_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HCS1858339.1"
                     /translation="MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
                     GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
                     LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
                     LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFITKERVEAPPTTTSMR
                     EDLRDIWQNDQWRIIGLLTIFNILVVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGN
                     LIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQL
                     VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA
                     AEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQ
                     QQFTSQEVQN"
     gene            3366..5684
                     /gene="yicI"
                     /locus_tag="OQQ26_002957"
     CDS             3366..5684
                     /gene="yicI"
                     /locus_tag="OQQ26_002957"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HCS1858340.1"
                     /translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQGNEMVVYAAPRDVRKR
                     TWQLDTPLFTLRFFSPQDGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAE
                     FKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGE
                     TVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSF
                     DVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTS
                     FTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRR
                     LKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNP
                     DACTWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWN
                     VLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFW
                     SHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLK
                     CRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAG
                     DVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVW
                     HEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRN
                     VVKVNGLQGGSQAESEQGLVVKPQGNALTITL"
     gene            complement(5737..7446)
                     /locus_tag="OQQ26_002958"
     CDS             complement(5737..7446)
                     /locus_tag="OQQ26_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709435.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HCS1858341.1"
                     /translation="MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSD
                     YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
                     LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVL
                     GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
                     SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLS
                     LRNMTFSKDDWQTQESKLSMNASEFIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGG
                     MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
                     LIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
                     LTANSSTVNISELSAFTEKGILEATASVSQTPQHQTHISLNGRGVPVNILQQWGWPEL
                     PLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGVVSSGEVTSTE
                     PVQ"
     gene            complement(7567..8958)
                     /gene="xanP"
                     /locus_tag="OQQ26_002959"
     CDS             complement(7567..8958)
                     /gene="xanP"
                     /locus_tag="OQQ26_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HCS1858342.1"
                     /translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
                     YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
                     VFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPTVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
                     AIVLNLIFPPEKQ"
     gene            9238..10443
                     /gene="gltS"
                     /locus_tag="OQQ26_002960"
     CDS             9238..10443
                     /gene="gltS"
                     /locus_tag="OQQ26_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HCS1858343.1"
                     /translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
                     VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
                     GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSMMGFYRVFERAVS
                     VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAG"
     gene            complement(10609..12690)
                     /gene="recG"
                     /locus_tag="OQQ26_002961"
     CDS             complement(10609..12690)
                     /gene="recG"
                     /locus_tag="OQQ26_002961"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709432.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HCS1858344.1"
                     /translation="MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
                     PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARV
                     VAEIEHDMALDVPMMRLVQGDVGSGKTLVAALAALRAIVHGKQVALMAPTELLAEQHA
                     NNFRNWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
                     LPPGRTPVTTVAIPDTRRTDIIDRVRHACMTEGRQAYWVCTLIEESELLEAQAAEATW
                     EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
                     WMPETERYSNA"
     gene            complement(12696..13385)
                     /gene="trmH"
                     /locus_tag="OQQ26_002962"
     CDS             complement(12696..13385)
                     /gene="trmH"
                     /locus_tag="OQQ26_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HCS1858345.1"
                     /translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAVWPGNRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
                     VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
                     ADWWATMQAAG"
     gene            complement(13392..15500)
                     /gene="spoT"
                     /locus_tag="OQQ26_002963"
     CDS             complement(13392..15500)
                     /gene="spoT"
                     /locus_tag="OQQ26_002963"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HCS1858346.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
                     LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
                     FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
                     NIMRKIRVMPDVIKVTRNRN"
     gene            complement(15519..15794)
                     /gene="rpoZ"
                     /locus_tag="OQQ26_002964"
     CDS             complement(15519..15794)
                     /gene="rpoZ"
                     /locus_tag="OQQ26_002964"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HCS1858347.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQESAELQAVTAIAEGRR"
     gene            complement(15849..16472)
                     /gene="gmk"
                     /locus_tag="OQQ26_002965"
     CDS             complement(15849..16472)
                     /gene="gmk"
                     /locus_tag="OQQ26_002965"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HCS1858348.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
                     RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
                     IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     AEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            16730..18065
                     /gene="ligB"
                     /locus_tag="OQQ26_002966"
                     /pseudo
     CDS             16730..18065
                     /gene="ligB"
                     /locus_tag="OQQ26_002966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709426.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
BASE COUNT         4153 a         4546 c         4833 g         4533 t
ORIGIN      
        1 aagacgcaaa aaaaataata taataacaaa aatcctccag ccttgtaggc cagaggataa
       61 aatacttaat tgaggaaaat atcagggaaa agtatttctg atttaacttt cccggctgga
      121 gagtgaatca atgtaatcag cgtaccattg catcatttca cggcggccat cgagatacag
      181 ggcatgatta taggtacccc tgatggaatt tttatccaca tgagctaact gcatttcaat
      241 ccaggcggaa ttaaagcctt gttcatgcag aattgtactc atggtgtgtc tgaaaccgtg
      301 ccctgtgagt cttcccttat atccaagtaa ttcaattact tggttaatgc tttccttact
      361 aattggtttg cggggatcat ttctaccgat aaagactagg ggatgatgtt ttgagattgg
      421 ttcaagctgc ttaaatagca taatgacctg ctcagagagc ggcacaatat gaggtcgctt
      481 catcttcatt acttctgccg ggatctccca caattttgtc tcaaaatcga tatcttccca
      541 gcgtgcaaaa cgcagttctt gtgttcgtac gccggttaac ataatgatct gagtagctgt
      601 cttagtgatt atacttccgg tataacccgc cagatcgttg aggaagtggg gaagttcatt
      661 agcagtaaga aagggaaaat gtactttttt cggtgtagct aaagcactgg caagatcggg
      721 ggctgggtta tagtctgccc ggccagtaac aattgcatag cggaacacct caccacagcg
      781 ctggcggacc ttgcgcattt tctccagagc tccacgtttt tccattttac gtagtgcttc
      841 cagtaactcc attggtttga tttcggcaat agggcgcttg ccaatgtagg gaaaaatgtc
      901 tttttcaaag gtatcaatga tttcatcacg atagcgtaat gaccaccgat cagcttttga
      961 ctggtgccat tcgcgagcaa tagcctcgaa cgtatttttc agactcattt gctgcgcgat
     1021 tttttcttcc ttttttgcct cccctggatc gcctccagca gcgaggagtt tcctggcttc
     1081 actgcgtttc tcgcgagcat cggctaacgt tacatcgggg tatacgccaa tagaaagcat
     1141 cttttcttta ccagcaaagc ggtacttcat gcgccagtat ttagaaccat tagtgttaat
     1201 cagtagatac ataccgccgc catcagcaag cttatagggt ttgtctttgg gttttgcggt
     1261 tttcactttg atatcggtta atgccatgac atcctccggc ttttgatgaa ttcatcttcc
     1321 tgagggggat ttctgccagt aactaacctg atacccccaa tacacccctt gtataacaaa
     1381 gatattgtta aaagccgttg ttatgtatca tatttttcct attatggggg tgcttgtatt
     1441 tcaataggaa ataacacccc ctaaagtacc cccaaaagaa acttgatatg gggtgaagta
     1501 ggttgacctc aggatacaaa taaatactga tatacaaggg attagaagag atttattgac
     1561 attgggagag ttcagaagag gtaaactggc ggaagatcac aggagtcgaa cctgcccggg
     1621 accgctggcg gccccaactg gatttgaagt ccagccgcct caccggagac gacgatcttc
     1681 cgcgcctcga ttgctacatg gaggcggggc gcattatagc tacttccttg agtttctaca
     1741 tcccccagat cagttttttc cgcctaatac acgcagcata ttatcacgaa agcattataa
     1801 ttcatataaa acccatattt tacaatgata tatgagcgga attaacgcta caacgatcac
     1861 ataaaacaag aatcataaat taataaccag atatcggaat attcgctctc acagggatgg
     1921 tttacaaaat gcgttatcgg tctcagcacc cctatagcat caaggaaaag cagatgaaga
     1981 gtgaagtgtt gtccgttaaa gagaaaattg gttatggcat gggagacgcc gccagccaca
     2041 ttattttcga taacgtaatg ttatatatga tgttctttta taccgatatt tttggcattc
     2101 ctgccggatt tgtcggaacc atgtttttgg tcgctcgtgc actggatgcg atttccgatc
     2161 cttgcatggg gttgttggcc gatcgaacgc gctctcgctg gggtaaattt cgtccgtggg
     2221 tactgtttgg cgcactgcca ttcgggatcg tctgtgtact ggcctatagc acgccagatc
     2281 tcagtatgaa cggcaaaatg atctatgcag caattactta caccctactt accttacttt
     2341 ataccgtcgt caatatccct tactgcgcat tgggtggtgt aatcaccaat gacccgactc
     2401 agcgtatctc gctgcaatcc tggcgttttg tgctggcgac cgcgggaggc atgctttcta
     2461 ctgttctgat gatgccactg gttaatttaa ttggcggtga taataaacca ctcggtttcc
     2521 agggcggtat cgcggtcctt tccgtggtgg cattcatgat gctggcattt tgtttcttca
     2581 tcactaaaga acgcgttgaa gcgccaccta caacgacgtc tatgcgggaa gatttacgtg
     2641 atatctggca aaacgaccag tggcggatta tcggtttact aaccattttc aatatcctgg
     2701 tggtgtgcgt acgcggtggg gcgatgatgt attacgtcac atggattttg ggcacgccgg
     2761 aagtgtttgt cgcttttctc accacttatt gcgtgggtaa cctgattggt tccgcactgg
     2821 caaaaccgct gaccgactgg aaatgtaaag tcactatctt ctggtggacg aacgccctgc
     2881 tggcagtgat tagcctcgcg atgttctttg ttcctatgca ggccagcatc actatgtttg
     2941 tcttcatctt cgtgattggt gtgttgcatc aactggtgac acctatccag tgggtaatga
     3001 tgtccgatac cgtcgactac ggcgagtggt gcaatggtaa acgcctgacc gggatcagtt
     3061 ttgctggcac gctgtttgtg ctcaaactgg ggttggcctt cggcggcgct cttatcggct
     3121 ggatgctggc ttatggcgga tatgatgcgg cagaaaaagc gcagaacagc gccacgatta
     3181 gcatcattat tgcgctattc acgattgttc cggcgatctg ttatttgctg agcgcgatta
     3241 tcgctaaacg ctactactca ctcacgacgc acaatctgaa aaccgttatg gaacagctgg
     3301 ctcagggtaa acgccgttgc cagcaacaat tcacctctca agaagtgcag aactaaggaa
     3361 cggcaatgaa aattagcgat ggaaactggt tgattcaacc tggcctcaat ttgattcacc
     3421 cgcttcaggt attcgaggtt gaacagcagg gtaatgaaat ggtggtctat gctgcccccc
     3481 gtgatgtacg taaacgtacc tggcagcttg acacgccttt atttacgctg cgctttttct
     3541 ccccacagga tggtattgtc ggtgtacgga ttgagcattt tcagggggcg ctgaataacg
     3601 gtcctcatta cccgctcaat attttgcagg acgtgaaggt cacaatcgaa aacacagaac
     3661 gttatgctga gtttaaaagt ggcaacttaa gcgcgcgtgt cagcaaaggt gagttctggt
     3721 cactggattt tctgcgcaac ggcgaacgta ttaccggtag tcaggtgaaa aataatggct
     3781 acgtgcagga cacgaataat caacgcaatt atatgtttga gcggctggat cttggcgttg
     3841 gcgaaacagt ttacggtctg ggagagcgct ttactgccct ggtgcgcaat ggccagacgg
     3901 tagagacctg gaaccgggac ggcggcacaa gtactgaaca ggcgtataaa aatatcccgt
     3961 tctacatgac taaccgtggt tatggggtac tggtcaatca tccccaatgc gtctcttttg
     4021 acgtgggatc ggagaaagtc tccaaagtgc agttcagcgt tgagagcgaa tatctcgaat
     4081 actttgttat cgacggtccg acgccgaaag cggtacttga tcgttatacc cgttttactg
     4141 gtcgtccggc gctaccgccc gcgtggtcct tcggtctgtg gctaaccact tcatttacca
     4201 ccaactacga cgaagcgacg gtaaacagct ttatcgatgg tatggcggaa cgcaatctac
     4261 cgctgcatgt tttccacttt gactgtttct ggatgaaagc cttccagtgg tgcgattttg
     4321 agtgggaccc gctgactttc ccggacccgg aagggatgat ccgccgcctg aaagcgaaag
     4381 ggctgaaaat ctgcgtctgg attaacccct atattgggca aaaatccccc gtctttaaag
     4441 agttacaaga gaaaggttat ttactcaaac gcccggacgg ttcgctgtgg cagtgggata
     4501 aatggcagcc aggtctggcg atttatgact ttaccaatcc ggatgcctgc acatggtacg
     4561 ccgacaaact gaaaggtctg gtcgcgatgg gcgttgattg ctttaagacc gactttggcg
     4621 aacgtatccc aaccgatgtt cagtggtttg acggttccga tccgcagaaa atgcataacc
     4681 attatgcgta catctacaac gaactggtgt ggaacgtgct caaggacacc gttggtgagg
     4741 aagaagctgt cttgtttgcc cgctcggcct ccgtcggtgc gcagaaattc ccggtacact
     4801 ggggtggcga ttgttacgct aactacgaat caatggcgga aagcctgcgc ggtggtttgt
     4861 ctattggcct ttcaggtttt ggcttctgga gccacgatat cggcggcttt gaaaataccg
     4921 ctccggcgca cgtttacaaa cgctggtgcg cgtttggttt gctctccagc catagccgtt
     4981 tacacggtag caaatcttat cgtgtgccgt gggcctacga tgatgagtcc tgtgatgtgg
     5041 tgcgcttctt cacgcaactg aaatgccgca tgatgccgta tctgtatcgt gaagctgcgc
     5101 gtgcgaacgc gcggggtacg ccgatgatgc gggccatgat gatggagttc ccggacgatc
     5161 cggcttgtga ttaccttgac cgtcaataca tgttaggcga caacgtgatg gttgcgccgg
     5221 tgttcactga agcgggcgat gtgcagttct acctgccgga aggtcgctgg acacacctgt
     5281 ggcacaacga tgaactcgac ggtagtcgct ggcataaaca gcagcacggc ttcctgagtc
     5341 tgcccgttta tgtgcgtgat aacactctac tggcgctggg caacaacgat caacgtcccg
     5401 attatgtgtg gcacgaaggc acggcattcc acctctttaa tctgcaagac gggcatgaag
     5461 ccgtctgtga agtgcccgct gctgacggat cggtgatctt tactttaaaa gcagcacgta
     5521 ctggcaacac gattactgtg actggtgcgg gcgaggcgaa gaactggacg ctgtgcttgc
     5581 gcaatgttgt gaaagtaaat ggtctgcaag gcggttcgca ggctgaaagt gagcaggggc
     5641 tggtggtgaa gcctcaaggg aatgcgctga caattacgtt gtaatctatt gatggaatgc
     5701 cgggtacgtc tgagtcgtac ccgacgagat tgatgtttac tgcaccggct ccgtcgatgt
     5761 aacttcaccg ctggaaacga cgcccgcatt catggtttga gtcacttgct gctttgcggc
     5821 gttcacggca tgcaattgcc cgctaaccgt aggtttcagc ggggcattgg cctgaatatc
     5881 tccactggcg gtaagctgaa tattgccgtc gccagtcaac ggtaattcag gccatcccca
     5941 ttgttgcaaa atattcaccg gcacaccgcg tccattcagg ctgatatggg tctgatgttg
     6001 tggcgtttgt gaaacactgg cagtggcttc cagaatgcct ttttcagtaa atgcactcag
     6061 ttcgctgata ttcaccgtgc tgctgttggc ggtcagcgcc agcgacgggc gacgaacatc
     6121 aacacgattg aatgtcgcgg cggcggcatt cagattcgcc gagccactcc agacgcccca
     6181 tttatgatcg gtaaccagcg tcaggttggc accgtaacca tcgagcgcgg tgagctgcca
     6241 cgggaagtca gggtcgatat caatgatcag attgcggctg gcgctaaatc tcttcagttg
     6301 caggctgttt aaccaaccgg gtgtcgtttc catccacaac tgttgccagt ttttcggcaa
     6361 ggtatattcc agcccggcaa ttgccgcatc atcaaggatc aacgttttcc cgtcacgcag
     6421 ccagttccct gacgttctga ccataccccc ttcccagcgg ctggtgaact ggcgcagcgc
     6481 tacgccctgc ggggaaaatt ccgcgtttat aatcgggtca aataaatgca gcgaaccata
     6541 aatgaattcg ctagcgttca tcgacagttt gctttcttgt gtctgccagt catctttact
     6601 gaaggtcatg ttgcgcaagc tgagatcgag gtcggtcacc gcccagtccg gaccttgcaa
     6661 acgagcatcg atcacttcca ggcgaccaat ctgcaacgac gggacagagc gtaatggcgc
     6721 aaagaagtcg gttagcgatt tttcgctttg tagacgtata tccgccatgc gcaggttttc
     6781 cacttgccag ctgccgtcgg cgttacgctg cgcgtttccg gttaatgtcc cgcgggcgat
     6841 gtcggcaccc aggttagtca gcgtaacgcg atcgttatca atactgcctt caatcagtac
     6901 attggtggca ggaacatcat tgagcgaaag agatccggca ctaaactgaa tctgcgcctt
     6961 cgtacccagc actttaccgg cttttggtga ccacggaact acgccgccat ttacccgctg
     7021 cgcgctcagt ttccattcgc tattcgggct attaaacgcc atatcacgca gttgcagacg
     7081 atcggctttg aacggtagcg gcgcggtctg gtcggtgaga ttcagcgtcc cgttttccag
     7141 caggatggta tcgacatggc gtggttcggt cagttgccga ctgcttagcg caatgtcgac
     7201 acttttggcc accagggtcg cgggctggcc atcacgacca aacgtgacgt tctccagcac
     7261 gatatgagat ggcgcggaaa aacggtgatc catcgccccg aaggccagat gatagtcgct
     7321 attctcggaa acccatgcgc tgatatgttc tgctccccag cgggtttgca gaagaaaata
     7381 gaggccagcg atcaccacta acagagcgat gagaatgtag agaagcagct tcccaataaa
     7441 tttcatggtc ttccatcccg tgaaatgcac ataagggagt tatgcacgat ttacgctcaa
     7501 tcctcaaggc gggaatggtt aaagaggtga gactgcggcg gtaattatct taccgccgcc
     7561 agtgaattac tgtttttctg gtgggaaaat cagattcagc acgatggcag taataccgcc
     7621 cgcggcgatc ccggaggaga gcaggttttt cagccattca ggggcaaact gcaaaatcag
     7681 cggctgctga gacacgccca gaccaaccgc cagcgacagc gcgataatca gaatcgcccg
     7741 acggttcagc ggctcacgag aaacgatacg cacaccggag gcggcgatgg tgccaaacat
     7801 tacaagcgtt gcgccgccca gaaccggttc tggaatgtgt tgtacaaaac cgctcactgt
     7861 cgggaacaga cccagcacga tcaacatcag cgcgacgaca aaaccgacat agcggctggc
     7921 aacaccagtc aactggatca ctccgttgtt ttgcccgaag caggagttcg ggaaggtgtt
     7981 aaacaccgcc gaaacaaacg agttcaggcc gtttgccagc acgccgcctt tcaggcgttt
     8041 catgtacagc ggaccggaca ctggctgttc ggaaacgtca gaggtcgccg tgatatcgcc
     8101 aatggtttcc agcgaagtga tcataaagac cagcatcagc ggcagcagca gactccattc
     8161 aatgccaaga ccgtaataga gcggcgttgg caccataatc agttcttgcg tcatcggttc
     8221 gttgctttct ggcaacatgc ccataaacca cgccagcgca tatccggccg ccatcgcaat
     8281 caccagtgag gccacgcgta agtaagggtt acgttgacgg ttaagcagga taattaaggc
     8341 taagaccacg cctgccagca gcagattttt cggtgcgccg aaggtgttat cgctcatggc
     8401 tgcgtaaccg ccgccaattg aggtcagccc cacctgaatt agcgacaggc cgataatcat
     8461 caccacaacg ccagaaacca gcggcgtaat aatgcggcgc gccagatgca gaacgcggga
     8521 gatcaccatc tcggtgcaac ttgccagcat caacgtgccg aacaaagccg ccatcatggt
     8581 aggaacatca gcaccaccgg ttttcagcgc ggtaccgccc ataatcagcg gggcaacaaa
     8641 gttgaagctg gtgccctgaa tagacaacag cccggagcca accggacccc aggccttaat
     8701 ttgaataatc gatgccacac cggaggcaaa cagcgacata ctaataatgt gttgcgtgtc
     8761 ttgtgccggt aaacccagcg cctggcagat taatagcgct ggcgtgatca ccgcaacgaa
     8821 catcgccagc agatgctgac aggcggcaaa cagggtttga ggaagcggcg gacgatcttc
     8881 aagacggtaa atcagttcgc tgttttgagt ctgcgcaacc ggttgcgcat tttctgactc
     8941 gagggtggaa acagacatcg aaaacaatcc cgtggtagca aagcgggcat tttagctgac
     9001 cgaaagagaa aagcaaacgt ttgctacatc ctcatctaaa tatttaaatg agataaatgc
     9061 acttttttat ataacttttg gtatttttct gcttaaaatc catgccattt gttcattaac
     9121 agctgagaat ttgacccagg aaagcataac tcgatacccg tcatagttca tgaagttgcc
     9181 actgcgcgat gaagtatgac gagtatgaaa gagtgatgcg gatacaaagg agtaactatg
     9241 tttcatctcg atactttagc aacgcttgtt gccgcaacgc tgacgttgct gctcgggcgt
     9301 aagttggtcc attccgtctc ctttttgaag aaatacacca taccggaacc tgttgcgggt
     9361 ggtttgttgg tggcgctggc gctactagta ctgaaaaaaa gcatgggctg ggaagtcaac
     9421 tttgatatgt ccctgcgcga tccgttaatg ctggctttct tcgccaccat tggcctgaac
     9481 gccaacattg ccagtttgcg tgccggtggg cgtgtggttg gcatcttctt gattgtggtt
     9541 gttggtctgt tggtgatgca aaatgccatt ggcattggta tggctagcct gttagggctt
     9601 gatccgctga tggggctgtt ggccggttct attacgcttt ccggcggtca cggtacgggc
     9661 gctgcgtgga gtaaattgtt cattgaacgt tatggcttca ccaatgcgac ggaagtggcg
     9721 atggcctgtg caacgttcgg tttggtgctg ggcggcttga ttggcggtcc ggtagcgcgc
     9781 tatctggtga aacactccac cacgccgaac ggtattccgg atgaccagga agtcccgacg
     9841 gcgtttgaaa agccggatgt gggccgcatg atcacctcgt tggtgctgat tgaaactatc
     9901 gcgctgattg ctatctgcct gacggtgggg aaaattgttg cgcaactttt ggctggcact
     9961 gcttttgaac tgccgacctt cgtctgtgta ctgtttgttg gcgtgattct gagcaacggt
    10021 ctgtcaatga tgggctttta ccgcgtcttt gagcgtgcgg tatccgtgct gggtaacgta
    10081 agcttgtcgt tgttcctggc gatggcgttg atggggctga aactgtggga gctggcttcg
    10141 ctggcgctgc cgatgctggc gattctggtg gtacagacca tcttcatggc gttgtatgcc
    10201 atcttcgtta cctggcgcat gatgggcaaa aactacgatg cggcagtgct ggctgcgggt
    10261 cactgtggtt ttggcctcgg tgcaacgcca acggcaatcg ccaacatgca ggcgatcact
    10321 gaacgttttg gcccgtcgca catggcgttt ttggtggtgc cgatggtcgg tgcgttcttt
    10381 atcgatatcg ttaacgcgct ggtaattaag ttgtatttga tgttgccgat ttttgcgggt
    10441 taaccgatga agcggcggta gaagtgccgc cgcaacaaag acaaatgcct gatacgcttc
    10501 gcttatcaag gctgcgcatt gattcacaat ttattgaatt tgtagggtga atcgcatccg
    10561 gcaggaaggt agggtaacct gaaatggcgg tcttctcact gccgcctttt acgcattcga
    10621 gtaacgttcc gtctccggca tccagcgttc tatcagggct tttgcctgtt gtgggtaacg
    10681 ttcgtgaata tggcgtgcca ggcgctgaac ttccgggatc atcgcctgat cgcgcagtaa
    10741 atccgccact ttaaattcag cattacccgt ctgacgagtg cctaacaatt cgccagggcc
    10801 gcgaatctcc agatcttttt gtgcaatcac aaacccgtcg ttgctgtcgc gcagcacttg
    10861 caggcgaatt tgcgccgttt tagaaagcgg cgttttatag agcagcacgc agtgagaagc
    10921 caccgcgcca cgacctacac gcccacgtag ctggtgcaac tgcgccagac ccagacgctc
    10981 cgggttttcg ataatcatca gactggcgtt aggcacatca acgccgactt caataacggt
    11041 tgtggcaacc agcaggtgta gctcaccttg tttaaacgac gccatcaccg cctgtttctc
    11101 ggcaggtttc atccgcccgt gtaccaggcc aacattcaac tctggtagcg ccagtttcaa
    11161 ctcttcccag gtagcttccg ccgcctgcgc ttccagtaac tctgactctt caatcaacgt
    11221 acaaacccag tacgcctgac gaccttcagt catgcaggcg tggcgcacgc ggtcaatgat
    11281 gtcggtacgg cgagtatcag gaatagcgac cgtagtcact ggcgtgcggc ctggcggcag
    11341 ttcatcaatg accgaggtgt cgagatcagc atacgcagtc atcgccagcg tgcgggggat
    11401 cggcgtggcg gtcatgatca actgatgcgg atggaagccc tgttgctggc ctttctccca
    11461 caatgccaga cgctgatgca cgccaaaacg atgctgttcg tcgataatca ccagcgccag
    11521 gccgttaaac tgcacctgtt cctggaagat ggcgtgcgta ccaacaatca tctgcacctg
    11581 accgctggcg atggcttctt gctgagccag ccgtgcttta cctttctgtt taccggcgag
    11641 ccagcccact tcgataccga gcggtgcaaa ccagttgcgg aagttattgg cgtgctgttc
    11701 ggcgagtaat tcggttggtg ccatcaatgc cacctgtttg ccgtgcacaa tcgcacgcag
    11761 cgcggcgagg gcggcgacca gcgttttacc ggaacctaca tcgccctgca ccagacgcat
    11821 catcggcaca tccagcgcca tatcgtgctc gatttccgct accacacgcg cctgagcgcc
    11881 cgttggcttg aacggtaagg ctgcgaggag tttatttttc agcgcgtcat tggcgctcag
    11941 cggctgggca tgaaaacgct gtgctccggc acgtaaggct aacatgctga ggttgtgcgc
    12001 cagcagttct tccagaatca gacgacgttg cgccggatgc tgcccggttt ccagatcgct
    12061 aagctgtagc gtcggtggcg ggcggtgcaa agtgcgcaac gcttccggta gcgtcatcat
    12121 tccttgtgac agttccggcg gcaggagttc ttcaatggcg caggtgtcga gcagatccag
    12181 cgcctggtct gttaatttac gcagcgtagc ctgctttacg ccttccgtag ttgggtaaac
    12241 cggcgtgagc gtttcctgta attctggcgt gctgagatcg ccctgcacgc ggtattccgg
    12301 gtggatcatc tccgcaccat atttaccgcg ctttgcttcg ccataagcca gtacacggcg
    12361 gcccgtcgcc aggctatttt tcattgccgc gctgaaattg aaaaagcgca tggtgaggat
    12421 gccggaaccg tcgctgatct ggcaggtcat catccgccga ccgccgaagg agatattgca
    12481 gttcagcact tcgccttcca ccgtggcata aacgcccggt agtagttctc cgatggggta
    12541 gagatgggtg cgatcttcgt agcgcagggg aaggtgtaag agtagatcct gcacggtatg
    12601 caggttgatt ttcgccagtt tgttactaag tgctgcgcca acgcccgtta gggaactgag
    12661 tgggacagca tctaacaggc gacctttcat ggcacttacc ctgcagcctg catagtagcc
    12721 caccagtcgg catcagcttc gatctcgcct tgctgattga cgtggggata aggcaggcct
    12781 ttgcgttttg cgactttcgc cagcaccgga tagccgcctt caaacaacag gcgttgttgc
    12841 tctgcttccg gcaacatgct gttttcacgc aggtacatgc ctgcattttg ccgctgacgc
    12901 tgggcttcgt aaagaatgag ggctgaggca acggaaacat tcagcgactg caccatgccg
    12961 atcatcggaa tgatgatgtc ctgatccgcc agggccaatg cttcctgcgt gatgcccgtt
    13021 ttctcctgtc ccatcaaaat gcaggtcggg cgagtgtaat caatttcgcg gaaatcgaca
    13081 gcgttatcag aaagatgggt tgccagaatc tgcatgccct ggcctttcag atgagcgacg
    13141 gcatcgccaa tggtgcggtg tgttttcacc tgtacccagc tgttactacc cgccgctgcc
    13201 gaagccatgg tgcgcatgcg gttaccaggc cagacggcgt gaacttcatg tacgccaacg
    13261 gcatctgcgg tacgaataat cgcagaaacg ttatgaggtt tgtggacctg ctccatgcag
    13321 acggtcagat caggctgccg cctggcgagc atttcgcaga tgcgtgcata acgtgttggg
    13381 ttcataaaac attaatttcg gtttcgggtg actttaatca cgtctggcat cacgcggatt
    13441 ttgcgcatga tattcgccag atgcacacgg tcacgggcgg tcagacgaat aaaggcgctg
    13501 tagacgcgac catctttctc ttccgtattc aaactttgaa tattcgaggt cgtggtgtta
    13561 attgccgctg tcaggtttgc cagcgcgccc tgatgattga acatctccac cttgatttcg
    13621 gtgatgaact cctgcgccgt ctctttatcc cattccacag ccataaactt ctctggctct
    13681 ttctggtagc cacggatgtt acggcaggat tcatggtgga tcaccagacc tttaccgggg
    13741 ctgacgtggg cgataatcgg gtcgccagga atagggcggc agcatttcgc aaaggtgatc
    13801 agcacgccat cggcaccttt aattggcaga tgtccgtgac tttgggttgc cggtggaatg
    13861 gaggcgtccc catgttgtag atttttcgcg accaccacgc tcattgcgtt accaaggccg
    13921 atttcagcca gcagatcgtc aagcgttgcc agcttcatgc gatccagctc gcgctgaata
    13981 ttttcctgcg ggatttcatt cagcttacgg ctaccaccca aagcatggtt gagcagacga
    14041 cggcccaggc ttacagaatc atcacgcttg aggtttttca gcaactgacg aattttggcg
    14101 cgcgctttcg agctaacgac aaagttcagc caagcggcat tcgggcgagc gcccggagcg
    14161 gtaatgattt caacggtctg accgctagta agcggctgcg acagcgggta aggctggcgg
    14221 tcgacgcgtg cgcccacgca ggcatggccg atatcggtat gcactgcata agcgaagtcg
    14281 acgggcgttg caccggcagg cagctcgaca atgcgccctt ccggtgtgaa aacgtaaatc
    14341 tcatccggga agagatcgga tttaacgctc tcgataaatt caaacgaact accggcgctc
    14401 tgttgcagct ccagcaggct ttgcatccag cgctgggcgc ggatttgtgc ggtagtactg
    14461 gtttcgccgt gctctttata agcccagtgc gcggcaacac ccatctccgc catctgatcc
    14521 atatcttcgg tacggatctg gacctcaacc ggcacgccgt gcgggccaat catcgaggtg
    14581 tgcaaagact gatagccgtt cgcttttgga atggcgatat agtctttcac gcggcccgga
    14641 cgcggcttgt acaggctgtg catctggccc agcacgcgat aacaggtgtc agaatcattg
    14701 acgatcacgc ggaaagcgta gatgtccatg attgagtgaa aacgctgctc tttgagcacc
    14761 attttgcagt aaatcgaata aagatgcttt tcgcgaccac tgacgcggca cggtattccc
    14821 gcttcctgca aacgcccttc gatttcagaa agaatcttct ggatcatctc tttacggttg
    14881 ccgcgcgcgg ctttcaccac ttctttgatt acgcgataac ggttgggata cagcgcctca
    14941 aaacccagct cttcgagttc ggttttaatg tggtggatac ctaaacggtg cgccagcggg
    15001 ctgtaaattt cgagagtttc acgggcgatg cggcgacgtt tgtccgggcg aagtgagccc
    15061 agcgtgcgca tgttgtgggt acggtcggca agtttgatga ggatgacgcg gatatcctgc
    15121 accatcgcca taatcatctt gcgaaagttt tcggcctgcg cctctttctt atcgcggaac
    15181 ttgagtttat caagtttcga taccccctct accagctcgg cgacgctttt accaaaaagc
    15241 tgttccatat cctggtaggt ggcgggggta tcttcaatca cgtcatgcag cagcgccgcc
    15301 atcagcgttt catagtcgag tttcatctcg gccagaatgc aggcaaccgc taccgggtgc
    15361 gtgatatagg gttcaccgct tgaacgtgtt tgcccctcgt gagcatcacg tgcaacgaga
    15421 tacgcctgcc gcagacgctt gatttggtct tccggcaggt aggtttgaat cagttgattc
    15481 aggctttcaa acagatacaa gggcgacccg ctttgtgatt aacgacgacc ttcagcaata
    15541 gcggtaacgg cttgtaattc agcggattcc tgctcttgct gttcctggcg ttcgcgaacg
    15601 tcgaggatct ggttgttgat cagaccttct tcgatttcgc gcagcgcgat tacagtagtt
    15661 ttatcgtttt cttccggtac cagcggatcc tttccgccta cctgcatctg acgagcgcga
    15721 cgcgcggcga ccagtaccag gtcaaaacgg ttaccaattt tctctacagc gtcctgaaca
    15781 gttacgcgtg ccatacttaa aaagctccac aggtgaagaa atgactgggc atgatactga
    15841 aatcaggttc agtctgccaa caatttgctg attaaagcgt catgacgctg cttttggcgg
    15901 ctcatgcgca gacgttcggc gcgaataatg gtcttcaaat cggtcaacgc ggtatcgaag
    15961 tcatcattca caatcagata atcatattcg gcgtaatggc tcatttctgc aacagcttgc
    16021 gccatacgct ttgcaatgac ctcttcgctg tcctgaccgc gaccgcgtag acggcggtcc
    16081 agttcaattt tggacggcgg taaaataaag atactccgcg cgtgcggcat cttctggcga
    16141 atttgctgcg cgccctgcca gtcgatatcg agaaaaacat cgacaccggt cgccagtact
    16201 tgctcaatgg cctcacgcga agtgccatag taattaccaa aaacttctgc gtgttcgagg
    16261 aacgcatctc tgctaatcat ttctttaaat tcatcatgat taacaaagaa ataatgttca
    16321 ccgtggactt caccaggacg cggttggcgt gtggtgtgtg aaacagaaac ctgggtgtca
    16381 tacaacggtt gggtttttaa taaagcctga atcaggctgg atttacccgc gccactgggg
    16441 gcagaaacaa tataaagcgt gccttgagcc atgagtatct ttcgtatgtg attagcgaaa
    16501 taaagcctac atacgagctt attatacacg gcgcggccat gtgacgtagc ccttgctcac
    16561 actttttgcg caaagttgtt gcgttttgcg tagctgcttc cgcatttgcc tgtcattcac
    16621 tgcaataaag acgattttca ggatgcgtcc tcgcagactc cgtttttgcc actcggcttt
    16681 gctttcatca cgttgtatat ctgcctgact atctacagtg gaggtgatga tgaaagtatg
    16741 gatggcgata ttaataagta tcttgtgctg gcaatcatct gtgtgggcgg tctgtccggc
    16801 ctggtcgcca gccagagcac aggaagaaat ttcccgcctg caacagcaaa taaaacagtg
    16861 ggacgatgac tactggaagg aaggaaaaag tgaggtggaa gacggtgttt acgatcagtt
    16921 aagcgcccgt cttacgcagt ggcaacgctg ttttgggaac gagacccgcg acgtgatgat
    16981 gccgccttta aacggtgcgg ttatgcatcc ggttgcccat acgggtgtac gcaaaatggc
    17041 ggataaaaac gcattaagtc tgtggatgcg cgaacatagc gatctttggg tgcagccaaa
    17101 agttgatggc gttgcagtaa ccctggttta tcgggacggg aaactgaaca aagcaatcag
    17161 ccgcggcaat ggcctgaaag gcgaggactg gacgcagaaa gttcgcttaa tttccgctgt
    17221 gccgcaaacc gtcagcgggc ctttggccaa tagtacgctt cagggggaaa tatttctcaa
    17281 gcgcgagggg catatccaac aacaaatggg ggaataaatg cccgcgcaaa agttgctggc
    17341 ctgatgatgc gccaggggaa tagcgacacg ctaaactcac tggctgtttt tgtctgggca
    17401 tggccggatg gaccgcagtt aatgaccgat cgtttaaaag agctggctac cgctggtttt
    17461 actctaacgc agacgtatac ccgtgcggtg aaaaatgctg atgaagttgc gcacgtacgc
    17521 aatgagtggt ggaaagcgag attacccttc gtcaccgatg gcgtggttgt gcgagcggct
    17581 aaggaacccg aatcccacca ttggctacca ggccaggcag aatggttggt ggcctggaaa
    17641 tatcaacctg tagctcaggt tgccgaagtg aaggcgattc agtttgcggt gggtaagagc
    17701 ggtaaaatat cggtggttgc gtcactcgca cctgtcatgc tggatgataa aaaagtccag
    17761 cgggtgaata ttggttccgt caggcgctgg caggagtggg atattgcgcc tggtgatcag
    17821 atcctcgtca gccttgccgg tcagggtatt cctcgcattg atgatgtggt ctggcgcggt
    17881 gcagaacgta caaaaccgac accaccagaa aaccgcttta actcgttgac ctgctacttt
    17941 gcttctgatg tttgtcagga acagttcatt tcacgcttag tctggctggg gtcaaaacag
    18001 gttcttgggc tggatggcat tggtgaggcc ggctggcgcg cgctgcatca gactcatcgc
    18061 tttga
//
LOCUS       DAJVTL010000093        17799 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.094, whole genome shotgun sequence.
ACCESSION   DAJVTL010000093 DAJVTL010000000
VERSION     DAJVTL010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17799
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.094"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..552)
                     /gene="rpnC"
                     /locus_tag="OQQ26_002967"
     CDS             complement(<1..552)
                     /gene="rpnC"
                     /locus_tag="OQQ26_002967"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnC"
                     /protein_id="HCS1858349.1"
                     /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
                     HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIATM
                     HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
                     TPDDEIMQHRRIAILELLQKHIRQ"
     gene            826..1206
                     /gene="panD"
                     /locus_tag="OQQ26_002968"
     CDS             826..1206
                     /gene="panD"
                     /locus_tag="OQQ26_002968"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HCS1858350.1"
                     /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
                     PNVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(1210..2439)
                     /locus_tag="OQQ26_002969"
     CDS             complement(1210..2439)
                     /locus_tag="OQQ26_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HCS1858351.1"
                     /translation="MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVT
                     VGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSN
                     QNLITWKDTPVYNAPSVGSVPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
                     ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQ
                     LEGYVKNTINVPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKW
                     NPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRA
                     LAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHPAVTTMKGKVKPGDNPLLLKRLYILR
                     TDSLEKMSRLVSNQPQG"
     gene            complement(2503..2943)
                     /locus_tag="OQQ26_002970"
     CDS             complement(2503..2943)
                     /locus_tag="OQQ26_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCS1858352.1"
                     /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
                     SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA
                     CRETMTSSEFRERIVELGGPEVSSLWHQQQKNPPFVLKHNLYEY"
     gene            complement(3048..3818)
                     /locus_tag="OQQ26_002971"
     CDS             complement(3048..3818)
                     /locus_tag="OQQ26_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1858353.1"
                     /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGDMHGFSYMQFIVLGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
                     HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
                     GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS"
     gene            complement(3815..4741)
                     /locus_tag="OQQ26_002972"
     CDS             complement(3815..4741)
                     /locus_tag="OQQ26_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HCS1858354.1"
                     /translation="MTIALKLQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
                     EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
     gene            4850..5512
                     /gene="can"
                     /locus_tag="OQQ26_002973"
     CDS             4850..5512
                     /gene="can"
                     /locus_tag="OQQ26_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HCS1858355.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
                     GIQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
                     STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
                     HK"
     gene            complement(5553..6089)
                     /gene="hpt"
                     /locus_tag="OQQ26_002974"
     CDS             complement(5553..6089)
                     /gene="hpt"
                     /locus_tag="OQQ26_002974"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004204384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HCS1858356.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG
                     SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY
                     AQRYRHLPYIGKVILLDE"
     gene            6295..8685
                     /gene="gcd"
                     /locus_tag="OQQ26_002975"
     CDS             6295..8685
                     /gene="gcd"
                     /locus_tag="OQQ26_002975"
                     /EC_number="1.1.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein glucose dehydrogenase"
                     /protein_id="HCS1858357.1"
                     /translation="MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYP
                     IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWRRLVIPASGAVAALVVALLISGGILTWAGFNDPQEINGTLSTDATPAEAI
                     SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV
                     TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAE
                     TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE
                     PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD
                     EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT
                     GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV
                     VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPKKDLSSADMWGATMFDQLVCRVMFHQM
                     RYEGIFTPPSEQGTLVFPGNLGMFEWDGISVDPNREVAIANPMALPFVSKLIPRGPGN
                     PMEQPKDAKGTGTESGIQPQYGVPYGVTLTPFLSPFGLPCKQPAWGYISALDLKTNEV
                     VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN
                     GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK"
     gene            complement(8887..10437)
                     /gene="cueO"
                     /locus_tag="OQQ26_002976"
     CDS             complement(8887..10437)
                     /gene="cueO"
                     /locus_tag="OQQ26_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HCS1858358.1"
                     /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
                     RNRIQLTIGAGQSTFGEKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW
                     HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
                     VIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG
                     AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL
                     MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
                     SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
                     MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
                     QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT
                     GMMLGFTV"
     gene            10603..10950
                     /locus_tag="OQQ26_002977"
     CDS             10603..10950
                     /locus_tag="OQQ26_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HCS1858359.1"
                     /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND
                     CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            11056..11922
                     /gene="speE"
                     /locus_tag="OQQ26_002978"
     CDS             11056..11922
                     /gene="speE"
                     /locus_tag="OQQ26_002978"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HCS1858360.1"
                     /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENTAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
                     YQAAIPTYYGGIMTFAWAADNDALRHLSTEIIQARFLASGLKCRYYNPAVHTAAFALP
                     QYLQDALASQPS"
     gene            11938..12732
                     /gene="speD"
                     /locus_tag="OQQ26_002979"
     CDS             11938..12732
                     /gene="speD"
                     /locus_tag="OQQ26_002979"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HCS1858361.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
     gene            complement(12770..13132)
                     /locus_tag="OQQ26_002980"
     CDS             complement(12770..13132)
                     /locus_tag="OQQ26_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414661.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HCS1858362.1"
                     /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
                     AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG
                     VEDFLQVVAAYRNFVQQK"
     gene            complement(13307..15904)
                     /gene="acnB"
                     /locus_tag="OQQ26_002981"
     CDS             complement(13307..15904)
                     /gene="acnB"
                     /locus_tag="OQQ26_002981"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HCS1858363.1"
                     /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF
                     LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP
                     ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG
                     PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESERGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
                     DGVIFQTAV"
     gene            16259..17799
                     /locus_tag="OQQ26_002982"
                     /pseudo
     CDS             16259..17799
                     /locus_tag="OQQ26_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414659.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
BASE COUNT         4378 a         4856 c         4358 g         4207 t
ORIGIN      
        1 ctggcgaata tgtttttgca gtagttcgag aatcgcaatc cgccgatgtt gcatgatttc
       61 gtcatccggt gtgatggtga tatccaccag cgggaaagga ctgttataga cgcgtcgcgc
      121 cagctccggc gagtaaaaca tatcaaacca gcacattgag agcggataag gtgtggcctc
      181 gccctgataa aacagtatcg gcaccaccag cggcagctta tcgtggtcag cctccagatg
      241 ccggtgcatg gtagcaatag aataacgcat catgcgaaag gccattttct tatccggctt
      301 gctttggtgt tcaatcacaa catgcagata accgggattg ccctgcattt gcacggaata
      361 gagcacgtcc gtgctgtgac ctttcaggct ctcttcaatg aaactccccg actctaaatg
      421 aagcgtgttg agatcacaaa gttcgcgtaa ttccactggc aaatgtatct ccagaaagtc
      481 gcgagccgtc tccgcatgca ttaaaaattg tttaaatacc gcgtcatgcg gtgtggtact
      541 cggtgcatcc atcttccctg tcttccgtgt ggccttgcgt gaaggcagta tccagtcaag
      601 gcgtgctatc gtcagccacc tctttattgt ttaccgagca gcgttcataa aaatatcaat
      661 tcgttacagg cgttacatgg cacgcttcgg cgcggtacgc aaactgctga cgcaaatgcc
      721 atcagatgag tagacactca tcaaaaatcg ggcaatactg cgtgagaatt tcctcaaagc
      781 aggcaccgcc tgcttcgtta acgacagggt agaaaggtag aagttatgat tcgcacgatg
      841 ctgcagggca aactccaccg cgtgaaagtg actcatgcgg acctgcacta tgaaggttct
      901 tgcgccattg accaggattt tcttgacgca gccggtattc tcgaaaacga agccatcgat
      961 atctggaatg tcaccaacgg caagcgtttc tccacttatg ccatcgcggc agaacgcggt
     1021 tcgagaatta tttctgttaa cggtgcggcg gcccactgcg ccagcgtcgg cgatattgtc
     1081 atcatcgcca gcttcgttac catgccagat gaagaagctc gcacctggcg acccaatgtc
     1141 gcctattttg aaggcgacaa tgaaatgaaa cgtaccgcga aagcgattcc ggtacaggtt
     1201 gcttgattgt tatccctgcg gctggttact caccagccgc gacatcttct ccagcgaatc
     1261 cgttcttaag atataaagtc gttttagtaa caacggatta tcccccggtt ttactttgcc
     1321 tttcatggtt gtcaccgccg ggtgaaatcc ggcatcgttt gctgccttca cggctttgtc
     1381 attaaagccg ccaaacggat acgaaagata ccagacatgt ggattaaatt gcgccagagc
     1441 gcggcgtgaa cgtgcaaaat caaacagaat attgtgctca ctacggctca gtaatatggg
     1501 tcggcgataa ccatctaccc gatgcaaaaa atgggtatgt gactggaaat caaaaacatc
     1561 gcgaatttcg ttaagctcag aaacgctcat aaattgcagc gattttgggt tccacttctg
     1621 cgggtgacgt ttgatgcgtg aggtaacaat aaacgccgtc gccttcatgc catattgttt
     1681 caacacagga tacgcatagc ggctcaccga cttgaggcca tcatcaaagg taatcaccac
     1741 cgctcgcgca gggacattga tcgtattctt cacgtaacct tccagctgcg ccatgctcag
     1801 tgtcgcgtat cccctgtcgc gcagccaggc catttggtta ttgaaagcgc gtaccgaggt
     1861 ggtcgtcgaa gtatggcgaa aacgggtgtt ttcttcgtcg cgcagaatat ggtgataagt
     1921 tagcaccggc aggccattat cgggttgggc atccagcgcg ctgatatagg ccagtcgatc
     1981 gccaatacgg atctgatacc aggtttgatt taacctgtct ttcagtttat gcaaaatcgg
     2041 gtagcgcaaa ttgtccgcca gtaccccaaa tggcacactg cccacactcg gcgcgttgta
     2101 gaccggcgta tctttccagg taattaagtt ctgattactc agcggcttgt tgaggtcacc
     2161 caaaccgtct tcaacttttt gtcgcccctg aactggctcg agatgccctt tatcgataaa
     2221 ccctttacca aagccaaaat taaatgcgta ataacttgcg gcagtgggct ccacggcaat
     2281 gatttgtccg gcccgaatat tccccacggt caccatcttg tcaccaattt gcgcccagac
     2341 cgcagcattt tcgatggttt gcatataacg ggcaggtaac gcggcactga cacttgcggt
     2401 aaacagcatc agcaggagaa taacagcttg tttatacatg aaaaaataac cgagggtgaa
     2461 acaacgcttt tattgtagca aaagcgccat cagaatcgcg ggttaatact catacaaatt
     2521 atgtttgagg acgaaaggcg gatttttttg ttgttggtgc caaagactac tcacctccgg
     2581 cccacccagt tcgacaatac gctcgcgaaa ctctgaactg gtcatggttt cacggcaagc
     2641 catcatctgt tcaattaacg gtaacgtgac accagaaatc acttcgcaac gggagtgttt
     2701 gtggcttaat aatgaagcca cgcggtacgg tggcgctccg gctatatcgg ttaagaagat
     2761 gacaccctca ccagagtccg cttcatgcag agcatcgcac atcatgcggc tgagcatatt
     2821 agagcttaat ccgcgccaga aattcacggc ccggcactga agaagtgccc catgtttttt
     2881 ctccagcgca tccagtatct cttgcgcccg gtcatcgtga caggtaatta cccaacctaa
     2941 catcgccttc ctccttagcc gaaaatcagt ctaccctgac cattgttgat aaagggtgat
     3001 agccgtcaaa actcctctcc cccgaatcca gaggagagga aatagcctta gctacgcaaa
     3061 ccacgtccac gttggatcag cgaccaacag atcaaataaa acgccacaat aaagaccacc
     3121 agtacgccaa aggtagtgac cagcggcaca tcatttatac cgaggaagcc gtagcggaaa
     3181 ccactgatca tataaacgat tgggttcagg tgcgacagcc cttgccagaa cggcggcaac
     3241 aaagtcaggg agtaaaagac cccgcccaaa tacgtgagtg gcgttaacac aaaggttggc
     3301 accaggctga tgtcatcgaa cgttttggca aacacgccgt tcagcaaacc cgcaagggag
     3361 aatagcaccg ccgtgagcac cagggttaag gcaacgaata cccacgaatg cacctgaaac
     3421 ggcacaaaaa acagtgaaat tgccgtcacc agaatgccaa caaacagacc acgcgccacg
     3481 ccaccgccga catatccggc aataatgacg tgagtcggaa ccggcgctac cagcagctct
     3541 tcaatattac gctggaactt ggcaccaaaa aatgatgacg cgacgttagc gtaggcattg
     3601 gtgatcaccg acatcatgat cagccccagt acgatgaact gcatatagct gaagccatgc
     3661 atatcgccaa tacgcgaacc tatcaggtta ccgaagataa taaagtaaag ggtcatggtg
     3721 atgactggcg gcaccagcgt ctgcacccag atacgcataa agcgatggat ctctttcgcc
     3781 cagatgcttt ttagcgccac ccagtaaaga tgcatcatgc gcgatctcct tgtttttcat
     3841 taaccagtga aacaaacagc tcttccagac ggttagcttt gttacgcata cttaatacct
     3901 gaatgccctg ctcacttaac tgcgtaaata cgctgttgat cccctgctca cgtagcactt
     3961 caacttccag cgtcgcggta tcgaccagtc gatactgata gccatcgagc ttcggtaacg
     4021 gacttttcgg tgcgagatcg agaataaagg tttccgattt cagcttcgcc agcagcgcct
     4081 tcatcgaggt attttccacc agctcaccat gttgaataat gccgatattg cggcacagca
     4141 tttctgcttc ttccaggtag tgtgtggtga gaatgatggt ggtgcctttg tcgtttaaat
     4201 ccttcaaaaa gccccacatt gagcggcgaa gttcaatatc cacgcctgcg gtcggttcgt
     4261 cgagaatcag tagtttaggt tcatgcatta acgcacgggc aatcattaaa cggcgcttca
     4321 tcccgccaga taacatacgc gcacgttcgt tgcgttttcc ccatagatcg agctgtttaa
     4381 gatacttttc gctgcggatg tacgcttctt tacgctccac accgtagtac cctgcctgat
     4441 tcaccacaat ttgctgcacg gtttcaaacg ggttgaagtt aaattcctgc ggcaccagtc
     4501 ccaactgacg tttagcgttc acgacatcct tctcgagatc gtaaccaaat acgctgaccc
     4561 gcccggaggt tttatttacc aaagagctga taataccgat agtggtcgat ttcccggccc
     4621 cgttcggccc gagaagcgca taaaaatcac ccgcttcaac ctgcaaatct attccacgaa
     4681 gcgcctgaac gccgcctgga taggtttttt taagctgttg aagtttcagt gcaatggtca
     4741 taaattttta cttaccttac gttcttacac tttatctgtg gtttaaatcg tcccggagtt
     4801 gccctatatt agccaaacgt aattatttgg ttacaggtcg ttaacctcca tgaaagacat
     4861 agatacactc atcagcaaca atgcactatg gtcaaaaatg ctggtggaag aggatcccgg
     4921 tttttttgag aaactggcac aagcgcaaaa accgcgcttt ctatggattg gatgttccga
     4981 cagtcgcgtt cctgcagaac gtttaaccgg tcttgagccg ggcgaactct ttgttcaccg
     5041 taatgttgct aacctggtca ttcacaccga cctgaactgc ctttccgtgg ttcagtatgc
     5101 agtggatgta ctcgaagttg aacacattat tatctgtggc cactacggtt gcggcggcat
     5161 acaagccgcc gttgaaaacc cggaactggg gcttatcaac aactggctgc tgcatatccg
     5221 cgatatctgg ttcaaacata gctcattgct cggcgaaatg ccgcaagagc gccgtctgga
     5281 taccttgtgt gaactgaacg tcatggaaca ggtgtataac ctgggccact ccaccattat
     5341 gcaatcagcg tggaaacgcg ggcagaaagt taccattcac ggctgggcct atggcattca
     5401 cgacggcttg ctgcgtgatc tggatgtcac agcgactaac cgcgaaaccc ttgagcaacg
     5461 ttaccgtcac gggatttcca acctcaagct gaaacacgcc aaccacaaat aaaaatgcca
     5521 tgccggatgc aacacatccg gcaacttcac acttactcgt ccagcagaat cactttgcca
     5581 atatacggca gatgacggta acgctgtgcg taatcaatgc cgtaacccac cacaaactca
     5641 tccgggatcg agaaaccgat aaattctacc gggacgttca cttcacgacg ggacggttta
     5701 tccagcagcg tacaaatcgc cagcgacttc ggttcgcgca ggcttaagat ctcacgcact
     5761 ttcgacagtg tattccccga gtcgatgata tcttcaacaa tcagcacgtc cttgccacgg
     5821 atatcttcat ccagatcttt gaggattttc acatcacggg tggtggacat gccgctaccg
     5881 tagctggagg cggtcataaa gtcgacttca tgagatacct gaacttcacg gcacagatcc
     5941 gccataaaca taaatgagcc acgcagcaga cccaccagca ccatatcgct gccgctgtct
     6001 ttgtaacgct cagtaatctg acgacccagt tcggcgatac gcgctttaat ctccgcttcg
     6061 gggatcatta cttctacagt atgtttcata tctctaacca tatgatttaa aaacaaatca
     6121 cttcgcacgg gcaggttttg gcaccgcaac aaagcgcaag acacgcagta taccagtaaa
     6181 acgattcatt cgcggaatct gttaataaag ctcgaattgt gatgacgatc acacatgtta
     6241 aaacctataa ttaattgcta ctaaaatatt aatgaattga aatggtgtct ctttatggca
     6301 attaacaata caggctcgcg acgattactc gtcacgctaa cagccctttt tgcagcgctt
     6361 tgcgggctgt atctactcat tggtggaggc tggctggtcg cgattggcgg ctcctggtac
     6421 taccctatcg ctggccttgt gatgctcggc gtcgcctgga tgctgtggcg cagtaaacgc
     6481 gccgcgcttt ggctatacgc agccctgctg ctcggcacca tgatttgggg cgtctgggaa
     6541 gttggtttcg acttctgggc gctgactccg cgcagcgaca ttctggtctt cttcggcatc
     6601 tggctgatcc tgccgtttgt ctggcgtcgc ttggtcattc ctgccagcgg cgcagttgcc
     6661 gcactggtgg tggcactgct gattagcggt ggcattctga cctgggccgg atttaacgat
     6721 ccgcaggaga tcaacggcac cttaagcacc gatgccacac ctgccgaagc tatctcaccc
     6781 gttgccgatc aggactggcc tgcctatggt cgcaatcagg aaggtcaacg cttttcgccg
     6841 ctgaaacaaa ttaacgccga taacgtccat aatctgaaag aagcctgggt gttccgtact
     6901 ggtgatgtga agcagccgaa cgatccgggt gaaatcacca atgaagtgac gccgattaaa
     6961 gtgggcgaca ccctttacct gtgtaccgct caccagcgcc tgtttgcgct cgatgccgcc
     7021 agcggtaaag agaaatggca ttacgatcct gagctgaaaa ccaacgagtc cttccagcac
     7081 gtaacctgtc gtggcgtctc ttatcatgaa gccaaagcag aaacggcttc gccggaagtg
     7141 atggcggatt gcccgcgtcg tatcattctt ccggtcaatg atggtcgcct gattgcgatt
     7201 aacgccgaaa acggcaagct gtgcgaaacc ttcgccaata aaggcgtgct caatctgcaa
     7261 agcaatatgc cagacaccaa accgggtctg tatgagccaa cttcgccgcc gattatcacc
     7321 gataaaacca tcgtgatggc gggttcagtc accgataact tctcaacccg cgaaacgtct
     7381 ggcgtgatcc gtggttttga tgtcaacacc ggggagctgc tgtgggcttt tgatccgggc
     7441 gcgaaagatc cgaacgcaat cccgtctgac gaacacacct ttacctttaa ctcaccaaac
     7501 tcgtgggcac cagcggccta tgacgcgaag ctggatctgg tgtatctgcc gatgggcgtg
     7561 accacgccgg atatctgggg cggtaaccgc acaccggaac aggaacgtta tgccagctcg
     7621 attctggcgc tgaatgccac taccgggaaa ctggcgtgga gctaccagac cgttcaccac
     7681 gacctgtggg acatggatct tccggcacag ccgacgctgg cggacatcac cgttaatggt
     7741 cagaaagtgc cagttattta cgctccggcg aaaaccggca acatttttgt gctcgatcgt
     7801 cgcaatggtg aactggtggt tccggccccg gaaaaaccgg tgccgcaagg tgctgcgaaa
     7861 ggcgattacg ttactccgac ccagccgttc tctgaactga gcttccgtcc gaagaaagat
     7921 ttgagcagtg cggatatgtg gggagccacc atgtttgacc aactggtgtg ccgcgtgatg
     7981 ttccaccaga tgcgctatga aggcattttc acgccgccat ctgaacaggg cacgctggtc
     8041 ttcccgggta acctgggaat gtttgaatgg gacgggattt ccgttgatcc aaatcgtgaa
     8101 gtggcgattg ccaacccaat ggcactgccg tttgtttcga aactgatccc acgcggtcct
     8161 ggtaacccga tggagcagcc gaaagatgcc aaaggcacgg gtacggaatc cggtattcag
     8221 ccacagtacg gtgtaccgta tggtgtcacg ctcaccccgt tcctctcacc gtttggtctg
     8281 ccatgtaaac agccagcatg gggttatatc tcggcgctgg atctgaaaac caatgaagtg
     8341 gtgtggaaga aacgtattgg tacgccgcag gacagtatgc cgttcccgat gccggttccg
     8401 gtaccgttca atatgggtat gccgatgctg ggcgggccaa tctccacggc gggtaacgtg
     8461 ctgtttatcg ccgctacggc agataactac ctgcgcgctt acaacatgag caacggtgaa
     8521 aaactgtggc agggtcgttt accagcgggt ggtcaggcta cgccaatgac ctatgaagtg
     8581 aatggtaagc agtatgtggt gatctccgca ggcggtcacg gttcatttgg tacgaagatg
     8641 ggcgactata ttgtggctta tgcgctgccg gatgatgtga agtaagactt gctcagattg
     8701 ctgacaacgt gcgcgttgtt catgccggat gcggcgtgaa cgccttatcc agcctacaaa
     8761 attgtgcaaa atcaatggat tgcacaggta gcgtaggcct gataagcgta gcgcatcagg
     8821 cagatttgcg tttgtcatca gtttaatgcc cggagagatc cgggcatatt tccaaatacg
     8881 gtctttttat accgtaaacc ctaacatcat ccccgtatct tcatgctcca gcagatggca
     8941 gtgcgccata taagcatgtt ctttcggtgc gtcgtgatta aacttcacca gcacttcact
     9001 gacattgcct tctaccttaa cggtatcttt ccagcccgcg cgatgagccg ctggcggttt
     9061 gccattttct gacaagatac ggaactgcgt gccgtgaata tggaacggat gcagcatcat
     9121 gtcgcccacg ccagagataa cccaacgttc gtactgccct ttcgccgccg caaacatcgg
     9181 cttattcata tcaaacgcct gaccgttgat tttattggca tggtggaaat cgaacttccc
     9241 gccatggttc atatgattca tattgccgtg ccccatatgg cccatcatct ggctatgatc
     9301 catcccggcc atcgcctgat cgccatattt ctccatcagc atctgcatcc ccatcatatc
     9361 gagcatcggg tccatagaaa gttgcagctt acgtaccgtc agcccttcca gcgaaggtaa
     9421 cgcaggcagg ctacttaatg tgtctggcaa agcaccagag gcactaatag caatcggctg
     9481 aatccgcatt accggatgcg gcttatcaaa aggcgcaatc gccattccca tctggctgac
     9541 cggtagcgtc accaggtcaa agggtttgtt gtcgttaacc tccaccagca cttcaaaacg
     9601 ctcgcccatc agcaccggca gctcgctcac cttcaccggt tcaggtagca gaccaccgtc
     9661 gctggcaatc acatacagcg ggcgattgtc gctggtggcg aaattgagcg agcgggcgtt
     9721 acagccattg agcaaacgta ggcgcagcca gccacgcggg gcagcgtgtt gtgggtagat
     9781 tgcaccgttg gtcagcagcg tatcgccaaa ccagcccacg gcggcggtca tcacatccag
     9841 ttgataatca atctgcccgt cagcgctaaa ttttttatcc tgaacaatca ccggaacatc
     9901 atcaataccc cactgttttg gcagcattaa tttcaggatc tcgtcatctt caattaccac
     9961 cagaccagcc agccccatcg ccacctgtcg cccggtcttg ccatgttgat gtggatggaa
    10021 ccagcaggta gcggcaggtt gatcaacgtt caacgtcacc gagcgcttgc cacctggcgg
    10081 aataattccc tgggggccgc cgtccacttc acccggtact tccagcccgt gccagtgcaa
    10141 cgtcgtctct tccgtcagtt ggttatagat atcaaccgtt accgctttgc cgcgctgtaa
    10201 tttcaccgcc ggccccagca gattgccgtt atagccccag gtagttgcag ttttctcgcc
    10261 aaaggtggac tgacctgcgc caatagttaa ctgaatgcga ttacgggcat cggtcgtgag
    10321 caaatcaggg atcggtaacg ttgggcgttc cgccgcaaat actgcgcggc tccacagcgg
    10381 caaggctgaa gccacaccca gcgcgacgga atattttaag aaatcacggc gttgcatagt
    10441 tatttcctta ttcttaagca ggcgaaacaa aatcaaacgt tgagcatagt ccttcccctt
    10501 acgggaaggt caagccgcag acacaattta atcgacaata atggtcgtcg cctcgctcgc
    10561 agtgtgctaa cgtttatctt ctttaagccc ctggtagaag caatgaagac gtttttcaga
    10621 acagtgttat tcggcagcct gatggccgtt tgcgcaaaca gttacgcgct cagcgagtct
    10681 gaagccgaag atatggccga tttaacggca gtttttgtct ttctgaagaa cgattgtggt
    10741 taccagaact tacctaacgg gcaaattcgt cgcgcactgg tctttttcgc ccagcaaaac
    10801 cagtgggatc tcagtaatta cgacaccttc gacatgaaag ctctcggtga agacagctac
    10861 cgcgatctca gcggcattgg cattcccgtc gctaaaaaat gcaaagccct ggcccgcgat
    10921 tccttaagcc tgcttgccta cgtcaaataa tccctgatac ctttttgtag aaatattgac
    10981 cgtgcatccg cggtcaatgt tagctattat gttgcgccct ttttttacgg gtgttaacaa
    11041 aggaggtatc aacccatggc cgaaaaaaaa cagtggcatg aaacgctaca cgaccagttt
    11101 gggcagtact ttgcggtaga taacgttctg tatcatgaaa agaccgatca ccaggatctg
    11161 atcatttttg agaacactgc atttggtcgc gtaatggcgc tggatggcgt agtacaaacc
    11221 accgagcgcg acgagtttat ctatcatgag atgatgaccc atgttccgct actggcccac
    11281 ggtcacgcga aacatgtgct gattatcggc ggcggcgacg gtgccatgct gcgtgaagta
    11341 acccgacata aaaacgttga gtcaatcacg atggtggaaa tcgatgcggg tgtcgtatcg
    11401 ttctgccgtc agtatctacc caaccataac gccggtagct acgacgatcc gcgctttaag
    11461 ctggtgatcg acgatggcgt caatttcgtt aatcaaacca gccagacctt tgatgtcatt
    11521 atctccgact gcaccgatcc tatcggtccc ggcgaaagcc ttttcacttc ggcattttat
    11581 gaaggctgca aacgttgcct gaatcctggc ggtatcttcg tcgcacaaaa cggcgtctgc
    11641 tttttacagc aggaagaagc catcgacagc catcgcaaac tcagccatta cttcagcgac
    11701 gttggctttt atcaggcggc gatcccgacc tattacggcg gtatcatgac ttttgcatgg
    11761 gcggcagata acgacgcctt acgccatctc tcaaccgaaa ttattcaggc gcgttttctc
    11821 gcctctggcc tgaaatgccg ttattacaat ccggctgtcc atacggcagc ttttgcctta
    11881 ccccagtatc tgcaagacgc actggcttca cagccgtcct aaggagaaga taagaaattg
    11941 aaaaaactga aactgcatgg ctttaataat ctgaccaaaa gtctgagttt ttgtatttac
    12001 gatatctgct acgccaaaac tgccgaagaa cgcgacggtt atattgctta tatcgatgaa
    12061 ctctataatg ccaaccgtct gaccgaaatc ctgtcagaaa cctgttccat tatcggggcc
    12121 aatattctta acatcgcccg tcaggattac gaaccacagg gtgccagcgt cactattctg
    12181 gtgagtgaag aaccggtcga cccgaaactt atcgacaaaa cagaacaccc cggcccactg
    12241 ccagaaacgg tcgttgccca tctcgataaa agtcatattt gcgtacatac ctacccggaa
    12301 agtcatcctg aaggcggttt atgtaccttc cgcgccgata ttgaagtctc tacctgcggc
    12361 gtgatttctc cgctgaaggc gctgaattac ctgatccacc agcttgagtc cgatatcgta
    12421 accattgatt atcgcgtgcg cggttttact cgtgatatta acggtatgaa gcactttatc
    12481 gaccatgaga ttaattcgat tcagaacttt atgtctgacg atatgaaggc gctgtatgac
    12541 atggtggatg taaacgtcta tcaggaaaat atcttccata ccaagatgtt gcttaaagag
    12601 ttcgacctta agcactacat gttccacacc aaaccggaag atttaaccga cagcgagcgc
    12661 caggaaatta ccgctgcgct gtggaaagaa atgcgcgaga tttattacgg gcgcaatatg
    12721 ccagctgttt aacggctctg gcggagctcc caggctccgc cagatttatt tacttctgct
    12781 gcacgaaatt gcggtaagcc gccacgacct gcagaaaatc ctcaacgccg catagcgaca
    12841 ggctttcttc gtcgtagtag ttcatcccct cttccatttc atcgccagcg aattccagtt
    12901 gattggcgcg aaccatcacc tcttcaccgt ccatccacag ggtgtattca tgccctgccc
    12961 gttgccagga ccgttcgcta cctttcagtg cgtgcgctgc ttgttccact tcatcaagca
    13021 aggccaggtt ttctttcacc tcttcattaa accagtgccc gaccacttca tgccccatgg
    13081 acatacgcac ctttaccact ccggtaatat cgcgcagaaa ttcgtaatcc atagtgtgtt
    13141 cctctgctcc cggcaatgcg ccgaaatcgc attgcgccat tgatgtaatt atcgcagcct
    13201 taccggagaa aaacagcgga acggcgatgg tttagaaata aaaaatgccc gggaatctca
    13261 ttcaccgggc attgtgtcgt ttatgcgcag cgcgtgcgct tacttattac accgcagtct
    13321 ggaaaatcac cccatcggct ttttcggtgt actgagaaag ctggttgaag ttcagataac
    13381 gataagtatc aacggcagtt ttatctactt gcgcaacgta ggtctggtac tcttccggcg
    13441 tcggcagttt gccaatcagc gccgcaacag ccgccagttc tgcagaagcc aggaagacat
    13501 tcgcgccagt acccaaacgg ttcgggaagt tacgggtaga ggtggaaacc accgtcgcac
    13561 cgtctgctac acgcgcctgg ttacccatac acagggaaca gccagggatc tcgatacgcg
    13621 caccactctt accgaagacg ctgtagtagc cttcttccgt cagttgcgcg gcgtccatac
    13681 gggttggcgg tgccacccac aggcgggtcg gcaactgacc tttgtgcgca tccagcagtt
    13741 taccagcggc acggaaatga ccgatgttag tcatgcaaga accgataaat acttcgtcga
    13801 tcttctcgcc ctgtaccgca gacagcggac gcgcgtcatc cgggtcgttc ggagcacaca
    13861 ggattggctc tttaatatcc gccaggtcga tgtcaatcac tgccgcgtat tccgcatctg
    13921 catcggcttc cagtagctca ggattcgcca gccatttttc catgccctga atacggcgtt
    13981 ctagggtacg acgatcgccg taaccttccg cgatcatcca cttcagcagg acgatgttgg
    14041 agttcaggta ttcgatgatc ggttctttgt tcagcttgat agtacaacca gcggcagaac
    14101 gctcggcgga cgcatcagtc agctcaaagg cctgctcaac tttcagatcc ggcagacctt
    14161 cgatttccag gatgcggcca gagaagatgt ttttcttgcc tttcttctca acggtcagca
    14221 gaccttgttt gatcgcatac agcgggatcg cgtgtaccag atcgcgcagg gtgatgcccg
    14281 gctgcatttt gcctttgaag cgcaccagaa cggattccgg catatccagc ggcattacgc
    14341 cagttgcggc agcaaacgcc accagaccag aacccgccgg gaaagagata ccgatcggga
    14401 aacgggtatg ggagtcacca ccggtaccga cggtatccgg cagcagcata cggttcagcc
    14461 aggagtgaat gacaccgtca cccggacgca gcgacacacc gccacggttc ataatgaagt
    14521 ccggcagcgt gtggtgcgtg ttcacgtcaa ctggcttcgg atacgccgcg gtgtggcaga
    14581 aagactgcat caccaggtca gccgagaagc ccaggcacgc caggtctttc agttcatcac
    14641 gggtcatcgg gccggtggtg tcctgagagc ctacagaagt cattttcggt tcgcagtacg
    14701 cgcccggacg aatgcctttc acgccacagg cacggcctac cattttctgc gccagcgaga
    14761 agccgcgctc gctctcagcg acatctttcg cctgacggaa cacatcactg tgcggcagac
    14821 caagtgcttc acgcgctttg gtggtcaggc cacgcccgat aatcagcgga atacggccac
    14881 cagcacgcac ttcatcaatc agcacgtcgg ttttcagttc gaaggtcgcc agcagttcgc
    14941 cggtttcgtg gttacgcact tcacctttgt acgggtaaac gtcaattacg tcgcccatgt
    15001 tcaggttaga gacgtcgact tcgattggca gtgcacccgc gtcttccatc gtgttaaaga
    15061 agatgggtgc aattttaccg ccgaggcaca aaccaccgcc gcgtttgttc ggcacatgtg
    15121 gaatatcatc gcccataaac cacagaacgg agttagtggc ggatttacgc gaagaccccg
    15181 tacccacaac gtcaccgacg tacgccagcg ggaaaccttt ctgttgcaga gcttcgattt
    15241 gcttgatcgg accaacaaca cctggctggt ctggctcaat accttcacgg gcgtttttca
    15301 gcatcgccag cgcgtgcagt gggatatccg ggcgtgacca cgcatccggt gccggagaaa
    15361 ggtcatcggt gttggtttcg ccagtgactt tgaagacggt aacggtcagt ttttcagcca
    15421 gcgccgggcg attcaggaac cattcggcat ccgcccagga ctgcattacc tgcttcgcat
    15481 attcgttgcc tgctttcgct ttctcttcta cgtcatagaa gttatcgaac atcagcagcg
    15541 tgtgagaaag tgctttggca gcaataggtg ccagtttggc atcatccagc gcgtcgatca
    15601 gcggatgaat gttgtaacca ccctgcatgg tgcccagcag ttcgatagct ttttccggag
    15661 tcagcagagg ggatttggct tcgcctttag cgatagcagc caggaagcct gcttttacat
    15721 aggcggcttc atcgacgcct gggggaacac ggttggttaa cagatctaac aggaattctt
    15781 cttcgcccgc gggcgggttt ttcagcagct ctacaagcgc ggccatttgg tttgcatcca
    15841 ggggtttggg cgcaatcccc tcagcggcac gctcagctac gtgcttacgg tattcttcta
    15901 gcacgacggt tctcctcgct ctcattgtca tagtgcggca ggcgattctc ttcacgctcc
    15961 tgtgagacag cagtttgtag ggtaaatgcc cagtaccgca acgggcagaa tagcaggatt
    16021 ttgacgacgt gttaatctgt ttacaaaaaa gcaacataaa aaagtggctg aatcgttaag
    16081 gatggtctag agattgtttc cctccgtaaa aacttcgtta attcgcatgg tgataatcac
    16141 ctttctcaac gaatcccaag attagtcaaa atttaaacta ccgcctcttt atactcggat
    16201 tcacagcacc tgcgggtggc agttcgccga ccattgcgat ttccttgaga tccgaattat
    16261 gaaaatgact ttgccgttta aaccccatgt gctggcgcta atttgcagtg ccgggctttg
    16321 tgctgcctct gccgggctat atataaaaac cgcacagtgg aagcgcctgt agaaccgcaa
    16381 tcgacacaac tggctgtgtc tgacgctgcc gcggttacgc ttcctgcaac ggtttccgca
    16441 cctcccgtaa tacccgcagt cgtcaaatcc gcattcagca ctgcacaaat agatcaatgg
    16501 gtcgcacccg tcgcgctgta tcccgacgcc ctactttcgc aggtgctgat ggcatcaacc
    16561 tatccgacaa acgttgctca agcagtgcaa tggtcgcacg ataatccact taaacaaggc
    16621 gatgctgcta ttcaggcggt atctgaccag ccgtgggacg ccagcgttaa atcactggtg
    16681 gcctttccac aattgatggc attgatgggc gaaaacccgc aatgggtgca aaacctgggc
    16741 gatgcttttc tggcgcagcc gcaggacgtg atggactcgg tacagcgatt gcggcaactg
    16801 gcgcaacaaa ccggttcgct gaagtcagca accgaacaga aagttattac cactacgaag
    16861 aaagctgtac cggtaaaaca gacagtcacg gcccccgtca taccatccaa taccgtttta
    16921 actgccaacc ccgtcattac agagccggca acaaccgtca tttctattga gcccgccaat
    16981 cctgatgtgg tctatattcc caactacaac ccaaccgtgg tttacgggaa ctgggccaat
    17041 actgcgtatc cgccggttta tctgccacca ccagccggag aaccgtttgt tgacagcttt
    17101 gtgcgcggat tcggctatag catgggcgtt gctaccacgt acgcactatt cagcagcatc
    17161 gactgggatg acgacgatca tgaccatcat catcatgacg atgatgatta tcatcaccac
    17221 gatggcggtc atcgtgacag taatggctgg caacacaacg gcgacaacat caatatcgac
    17281 gtcaacaatt tcaaccgtat caccggtgag catcttactg ataagaatat ggcatggagg
    17341 cacaatccaa actaccgtaa tggtgtgccc tatcatgatc aggatatggc aaagcggttt
    17401 catcaaaccg atgtcaacgg cagaatgagt gccacgcagc tacctgctcc aacacgcgac
    17461 agccagcgtc aggcggcagc aagtcagttt cagcaacgaa cacacgccgc ccccgtcatt
    17521 acacgagata cccaacgtca ggcagcggca cagcggttta atgaagctga acactatggg
    17581 agctatgacg acttccgcgg cttcagccgt cgccaaccac tgacccagca acaaaaggac
    17641 gccgctcgtc agcgttatca gtcggcctct cctgagcagc gccaggcagt ccgcgagaaa
    17701 atgcagacta acccgcagat ccagcagcga agggaggcgg cgcgccagcg tattcagtcc
    17761 gcctcgcctg agcagcgcca ggcggttcgc gagaaaatg
//
LOCUS       DAJVTL010000094        17733 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.095, whole genome shotgun sequence.
ACCESSION   DAJVTL010000094 DAJVTL010000000
VERSION     DAJVTL010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17733
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.095"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            88..1743
                     /gene="opgD"
                     /locus_tag="OQQ26_002983"
                     /gene_synonym="mdoD"
     CDS             88..1743
                     /gene="opgD"
                     /locus_tag="OQQ26_002983"
                     /gene_synonym="mdoD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein OpgD"
                     /protein_id="HCS1858364.1"
                     /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
                     FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
                     AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
                     FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
                     KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC
                     FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
                     WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
                     STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS"
     gene            1883..2107
                     /locus_tag="OQQ26_002984"
     CDS             1883..2107
                     /locus_tag="OQQ26_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HCS1858365.1"
                     /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGY
                     NAEVVRMKKQKLQLKDEMLKILQQESVKEV"
     gene            2170..2709
                     /gene="rimL"
                     /locus_tag="OQQ26_002985"
     CDS             2170..2709
                     /gene="rimL"
                     /locus_tag="OQQ26_002985"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HCS1858366.1"
                     /translation="MTETIKVSESLELHAVAENHVTPLYQLICKNKTWLQQSLNWPQF
                     VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
                     SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
                     FLNDAYDDVNLYARIIDSQ"
     gene            complement(2664..3676)
                     /locus_tag="OQQ26_002986"
                     /pseudo
     CDS             complement(2664..3676)
                     /locus_tag="OQQ26_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707644.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3800..4624
                     /locus_tag="OQQ26_002987"
     CDS             3800..4624
                     /locus_tag="OQQ26_002987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HCS1858367.1"
                     /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
                     VILAMIIWGLLTSAFIARLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFR
                     PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACSAWL
                     SVNGGVGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHL
                     GSGSDNGFFHTLAVPLFIFTNFIIAILLIRTLALLMQGKLLVRTERAVLMKAEDKE"
     gene            4621..5214
                     /gene="tehB"
                     /locus_tag="OQQ26_002988"
     CDS             4621..5214
                     /gene="tehB"
                     /locus_tag="OQQ26_002988"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HCS1858368.1"
                     /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
                     SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFAGQYDFILST
                     VVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDSADYPCTVGFPFAFKERELRRYY
                     EGWEMVKYNEDVGELHRTDANGNRIKLRFATMLARKK"
     gene            5517..6185
                     /locus_tag="OQQ26_002989"
     CDS             5517..6185
                     /locus_tag="OQQ26_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HCS1858369.1"
                     /translation="MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKET
                     TSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMK
                     EAIAQRKPLVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTM
                     DTRLYFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFD
                     VNKK"
     gene            complement(6220..7431)
                     /gene="ydcO"
                     /locus_tag="OQQ26_002990"
     CDS             complement(6220..7431)
                     /gene="ydcO"
                     /locus_tag="OQQ26_002990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BenE family transporter YdcO"
                     /protein_id="HCS1858370.1"
                     /translation="MLRCLYAITHEVTMRLFSVPPPTLLAGFLAVLIGYASSAAIIWQ
                     AAIVAGATTAQISGWMTALGLAMGVSTLTLTLWYRVPVLTAWSTPGAALLVTGLQGLT
                     LNEAIGVFIVTNALIVLCGITGLFARLMRIIPHSLAAAMLAGILLRFGLQAVASLDGQ
                     FTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVSVIAQGDVVTTDVVFKPVLPSYITPD
                     FSFARSLSVALPLFLVTMASQNAPGIAAMKAAGYSTPVSPLIVFTGLLALVFSPFGVY
                     SVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLLAGLFGSAITGMMAALPVSWIQ
                     MLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGLTLVGIGSAFWGLIAGGVCY
                     VVLNLIADRNR"
     gene            7484..8020
                     /gene="sutR"
                     /locus_tag="OQQ26_002991"
     CDS             7484..8020
                     /gene="sutR"
                     /locus_tag="OQQ26_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SutR"
                     /protein_id="HCS1858371.1"
                     /translation="MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNE
                     SSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHF
                     SIQMAPGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQSLNCGEGARFAADVTHIYR
                     NGGEQIVHFHSLIHYPRS"
     gene            8093..10054
                     /gene="rlhA"
                     /locus_tag="OQQ26_002992"
     CDS             8093..10054
                     /gene="rlhA"
                     /locus_tag="OQQ26_002992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA 5-hydroxycytidine C2501 synthase"
                     /protein_id="HCS1858372.1"
                     /translation="MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA
                     SNSLKDIAELVSFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMG
                     ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATI
                     EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS
                     MKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARAS
                     SGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDV
                     AVTEPLANGDGLNVLIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNR
                     NLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNA
                     EKAMNNLKDGLAKLGQTIYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASY
                     QRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPV
                     MITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKN
                     HILKMPLPGSVVASVSPDELLKTLPKRKG"
     gene            complement(10146..10376)
                     /locus_tag="OQQ26_002993"
     CDS             complement(10146..10376)
                     /locus_tag="OQQ26_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncJ family protein"
                     /protein_id="HCS1858373.1"
                     /translation="MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEAD
                     SDELRAVAEESAEGLREHFYWQKSRKPEAGQR"
     gene            10598..10774
                     /gene="hicA"
                     /locus_tag="OQQ26_002994"
     CDS             10598..10774
                     /gene="hicA"
                     /locus_tag="OQQ26_002994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415954.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin HicA"
                     /protein_id="HCS1858374.1"
                     /translation="MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIK
                     EPLRKAILKQLGLS"
     gene            10820..11236
                     /gene="hicB"
                     /locus_tag="OQQ26_002995"
     CDS             10820..11236
                     /gene="hicB"
                     /locus_tag="OQQ26_002995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415955.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HicB"
                     /protein_id="HCS1858375.1"
                     /translation="MRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALL
                     TAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGK
                     PKQEITRLFNLHHATKIDAVQLAAKALGKELSLVMV"
     gene            11315..12721
                     /locus_tag="OQQ26_002996"
     CDS             11315..12721
                     /locus_tag="OQQ26_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HCS1858376.1"
                     /translation="MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVS
                     HAYQLLESQGYIIARPQSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRD
                     PSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIACRYAL
                     QGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSV
                     ATDVKEGIDLQALELALQEYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTL
                     IEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQR
                     LQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKI
                     HHNDSGYFLWLELPEPLDAGELSQAALAHHISIAPGKMFSTGENWSRFFRFNTAWQWG
                     EREEQAVKQLGKLIQERL"
     gene            12966..14111
                     /locus_tag="OQQ26_002997"
     CDS             12966..14111
                     /locus_tag="OQQ26_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HCS1858377.1"
                     /translation="MSKTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGY
                     IERGQTDKQYDWVTQFEKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLI
                     MGKCVQPINTALIPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPP
                     DSWQVVFVEQNLPDGKSNKGRVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQY
                     QAVLKVLRDQHSLIHRYWHDTTVQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFP
                     KEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPL
                     LGEKGCETNGFNYFDKIAFWKTPIAEGGKFVPYSRWTQDYIAIMGGR"
     gene            14129..15141
                     /locus_tag="OQQ26_002998"
                     /pseudo
     CDS             14129..15141
                     /locus_tag="OQQ26_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310072.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            15142..16059
                     /locus_tag="OQQ26_002999"
                     /pseudo
     CDS             15142..16059
                     /locus_tag="OQQ26_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415959.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            16049..16842
                     /locus_tag="OQQ26_003000"
                     /pseudo
     CDS             16049..16842
                     /locus_tag="OQQ26_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415960.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            16864..17700
                     /locus_tag="OQQ26_003001"
                     /pseudo
     CDS             16864..17700
                     /locus_tag="OQQ26_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415961.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
BASE COUNT         4381 a         4290 c         4570 g         4492 t
ORIGIN      
        1 gtgagcggtc ataaataagc actttcttgc cgctgaaaac gaccagcgcg ggaccattca
       61 caacaccaga aggactcact ttcaggtatg gatcgtagac gatttattaa aggttcaatg
      121 gctatggccg ccgtgtgcgg taccagcggc attgcttctc ttttttctca ggcggcattc
      181 gcggcagatt ctgatattgc cgacgggcaa acccagcgtt ttgacttctc cattctacag
      241 tcaatggcgc acgacttagc gcaaacagcg tggcgtggtg cgcctcgtcc gttacctgac
      301 acgctggcga caatgacgcc gcaggcttat aacagtattc aatacgacgc cgaaaaatcg
      361 ctctggcata acgttgagaa ccgtcaactg gacgctcagt tcttccatat gggaatggga
      421 ttccgtcgcc gcgttcgtat gttttctgta gatccagcaa cacatctggc gcgtgaaatt
      481 cactttcgcc cggagttgtt caaatacaac gatgcgggtg ttgataccaa acaattagaa
      541 gggcaaagcg atctcggttt tgccggtttt cgcgtgttta aagcccccga actggcgcgc
      601 cgtgatgtag tatcatttct cggcgcgagt tatttccgcg ccgttgatga tacatatcaa
      661 tacggtttgt cggcccgcgg cctggcgatc gacacttaca ccgacagtaa agaagagttc
      721 cccgacttta ccgccttctg gtttgatacg gtaaaaccgg gggcaactac ctttaccgtt
      781 tatgcgttgc tcgatagcgc cagcattact ggtgcctata agttcactat ccattgtgag
      841 aaaagtcagg tgattatgga tgtggaaaat cacctgtatg cgcgcaaaga cattaaacag
      901 ctgggcattg cgccgatgac cagtatgttc agctgcggta ctaatgaacg tcggatgtgc
      961 gatacaattc atccgcaaat tcatgactct gatcgtctgt ccatgtggcg gggcaacggc
     1021 gagtggattt gccgtccgct gaataatccg caaaaattgc agttcaatgc ttacaccgac
     1081 aacaacccga aagggtttgg tttattgcaa ctggatcgtg acttctccca ttatcaggac
     1141 attatgggct ggtataacaa acgcccaagt ctgtgggtgg aaccgcgtaa caagtggggt
     1201 aagggcacca tcggcctgat ggaaatccca acaacgggcg aaacgctgga taacattgtc
     1261 tgcttctggc agccagaaaa agctgtaaaa gcgggtgatg agtttgcatt ccagtatcgt
     1321 ctgtactgga gtgcgcaacc gcctgttcat tgcccattag cgcgcgttat ggcgacgcgt
     1381 accggcatgg gcggtttccc ggaaggctgg gcgccaggtg aacattatcc cgaaaaatgg
     1441 gcgcgtcgtt ttgccgtcga tttcgttggt ggtgatctga aagctgccgc accgaaaggc
     1501 attgagccgg tgattacgct ttccagtggg gaagcgaagc aaatcgaaat tctctatatt
     1561 gaacccattg atggttatcg tattcagttt gactggtatc cgacttcgga ctccactgat
     1621 ccggtcgata tgcggatgta tctgcgttgt cagggcgacg ctatcagtga aacatggctg
     1681 tatcagtatt tcccgccagc gccggataaa cgtcagtatg ttgacgaccg cgtgatgagt
     1741 taatcgtttt ttcttcggca ccttcttcgg gaggtgccgt ctggttaaac acgatcccgc
     1801 tcgcattttt ccctaagtta aatgagtaat ctgatggtgt gtatttcaga tacaccttgt
     1861 cagccactaa cagggagtgc gtatgtttcc agaataccga gatttaatat cccgtctgaa
     1921 aaacgaaaat cctcgcttta tgtccttgtt cgataaacac aataaacttg atcatgaaat
     1981 tgccagaaag gaaggttccg acggtcgagg gtacaatgcg gaagtggtcc gcatgaaaaa
     2041 acaaaagcta cagttaaaag atgagatgct caaaatcctg cagcaggaga gcgtcaaaga
     2101 ggtgtaaact ttcctaagcc gccagccagg cggctttttt aacaactgca tggattgact
     2161 ggagataaga tgactgaaac gataaaagta agtgaatcac ttgaattaca tgctgttgca
     2221 gaaaatcacg tcactcctct ttatcagtta atctgtaaaa ataaaacctg gttacagcag
     2281 tcgctaaact ggccgcagtt tgttcagagt gaagaggaca cgcgaaaaac ggtgcagggt
     2341 aatgtgatgt tgcatcaacg cggctatgcc aaaatgttca tgattttcaa agaagatgaa
     2401 cttatcggcg ttatctcgtt taatcgtatt gaaccactga ataaaaccgc tgaaatcggc
     2461 tattggctgg acgaatctca tcaggggcag gggatcattt ctcaggcgct gcaggcactg
     2521 attcatcatt acgcccagtc tggtgaactt agacgctttg tgatcaaatg tcgggtggac
     2581 aatccgcaaa gcaatcaggt cgctttgcgc aatggtttta tccttgaagg ttgcctgaaa
     2641 caggctgagt tcctgaatga tgcctatgat gatgtgaact tatacgcgcg tattatcgat
     2701 tcacaataac cctgccagcg cgttcgcgta atgcgctcct cgccgttaat gacttttgga
     2761 ccacggacat gaaccgtgtc gccatcaaag gcttcaacga cggcgtggtc ggttaactcc
     2821 acatggtttt caattatcac tgcacctgta atacggctct caccttgtat tacaacgtgc
     2881 tcgtcgagca gaatcggtcc gccacgtacc acggcatttc cgccaatcaa aacatgatgt
     2941 tttaacacac aattaccttc tacaatggca tattccgcca cctgtgaact gtaatgaatc
     3001 gtcggaatgg catcttcttc tatgccagct tctgcgcgtg accgtaaact ttagcgcaat
     3061 cgcatagcca gacgttgttc tcttcattac cttcaacact ggcaaaatca aaaacttcgg
     3121 cgcgatgttc aataaaagca taccggacga cggcatcgcc ataaatttgt gcctggtgaa
     3181 caatacgcga ggcgctaacc cttgcgcgat cataaatttg tagcaggagt tgatggtcag
     3241 gcgttaagcc ttgtgctgcg acgatcatag aatgttgatt aattaaggcg tgatcaaata
     3301 ttctacattg cccgcaaacc agtgagtcat gaatggtgac actgtcactt atatgtgcac
     3361 catggctgat ttcactatta tcgatccaga cattatccgt tgcgtaaacc tctccccaca
     3421 gcacgctggt gccggtgatg cgcgtattac cggaaatcac cgctccgccg aacgcaatag
     3481 cattctggtc gtaaatccag caatttcctt cctgtgctaa caccgtttcg cgatcgatcc
     3541 agccgccagc ggttcctgct atcacatcgt taaaatcgct aatggcgata atctgccgta
     3601 ataacacact ttttttagtg ccatcttcct gataactaaa ggctcgctgt tcttcactta
     3661 gacgatattt gcgcatagcg ttttcccaca ggtgacttac tataaccgta gcaaattctg
     3721 cggctctggc tatgctcgag aaaattccat aaaatgcatt tcaaatatac tttataaatt
     3781 aaacaaaatg agtaagaaga tgcagagcga taaagtgctc aatttgccgg caggctactt
     3841 tggtattgtg ttggggacga tagggatggg atttgcctgg cgctatgcca gccaggtttg
     3901 gcaggtcagc cactggttag gggatgggct ggtgattctg gcgatgatca tctggggatt
     3961 attgactagc gcatttattg cccgactcat acgctttccg catagcgtgc tggcggaagt
     4021 tcgccatcca gtgctgagca gttttgtgag tttgtttccg gcaacgacga tgctggtggc
     4081 gattggtttt gttccgtggt ttcgcccact ggcggtgtgc ctgttcagtt ttggtgtcgt
     4141 ggttcagttg gcttatgccg cctggcaaac tgcgggatta tggcgcggat ctcaccctga
     4201 agaagctacc acgcctggac tgtatctgcc gacagttgcc aacaacttta tcagcgcaat
     4261 ggcctgtagt gcctggttga gcgtcaacgg cggcgtgggt gacacgctgg cgaaaatgct
     4321 tttcggttat ggactgctgc aactgctgtt tatgctacgt ctgatgccat ggtatctctc
     4381 ccagccattt aatgcttcat tctggagttt ctcgttcggc gtatctgcac tggcaaccac
     4441 cggtttgcat ctggggagtg gcagcgataa tggatttttc catacgctgg cggtgccgct
     4501 gtttatcttt accaatttta ttattgcaat actgctcatc cgtactttgg cgcttctgat
     4561 gcagggaaaa ttgttagtca gaaccgagcg cgctgtttta atgaaagcag aggacaaaga
     4621 atgatcattc gtgacgaaaa ttattttact gataaatatg aattaacccg cacacactct
     4681 gaagtactgg aagcggtgaa agtggttaaa ccgggtaaaa cgctggatct gggctgtggc
     4741 aatggtcgta acagtcttta cctggcagcc aatggttatg atgttgacgc atgggataaa
     4801 aatgccatga gtatcgccaa cgtcgagcgc attaaatcta ttgaaaatct ggataattta
     4861 cacactcggg tcgttgatct gaataacctc acatttgctg gacagtacga ttttattctt
     4921 tcgactgtgg tgctgatgtt ccttgaggct aaaaccatcc cagggctgat tgccaatatg
     4981 caacgttgca cgaaacctgg cggttacaac ctgattgtgg cggcgatgga tagcgctgat
     5041 tatccatgta ccgtcggctt cccgtttgcc ttcaaagaga gagaattacg tcgatattac
     5101 gaaggctggg agatggtgaa atacaatgaa gacgtcggcg agctgcaccg caccgacgcc
     5161 aacggtaatc gtattaaact gcgtttcgcc acgatgctgg cacgtaaaaa atgacccggt
     5221 aagaacaaag cgcgtgaaaa ttccccacgc tgagatggtt tactgttctt cttttcggta
     5281 agcatatttt ttatcgaagg gatgtgaaat taatcacagt agtcgaagtt ttttagcagc
     5341 ttaacttact gaaatttaac tactgatgat tgacttagcc cctttttcgg cattgactat
     5401 gtcgtctgaa aaggggctaa aaaatttatt ttcaccaaca ctttttttgc cacaacacga
     5461 agcggcgctt tttgctataa cttaaaaagt aatataatca tctcaggaaa ctattcatgc
     5521 gtaccacatc atttgcgaaa gttgcagctt tatgcggctt attggctctg tctggttgtg
     5581 cctctaaaat cacccagcca gataaatatt ctggtttttt aaacaattac tctgatttaa
     5641 aagaaacaac ctcggctaca ggtaaacctg ttttacgttg ggtagacccg agttttgatc
     5701 aaagcaaata tgacagcatc gtctggaacc caatcactta ttatccggta ccgaaaccgt
     5761 cgacccaggt agggcagaaa gttctggata aaattttgaa ctataccaac accgaaatga
     5821 aagaagcgat agcgcagcgt aaaccactgg ttaccaccgc ggggccgcgt agtctgattt
     5881 tccgtggggc cattactggt gtagatacca gcaaagaagg gctgcaattc tatgaagtgg
     5941 ttcctgttgc attagtggtt gcggggacgc aaatggctac aggccaccgt accatggata
     6001 ctcgcctcta ttttgaaggt gagctgattg atgcagcgac taataaaccg gttatcaaag
     6061 tcgttcgtca gggcgaaggt aaagacctga ataacgaaag tacgccaatg gctttcgaaa
     6121 atattaaaca agttattgat gacatggcga ccgatgccac catgtttgac gttaacaaaa
     6181 agtagttcca gacgcgccat cgttagatgg cgctttttat tatcggtttc tgtcagcgat
     6241 taaattcaac accacgtaac aaacgcctcc ggcaattaat ccccaaaacg cagaaccaat
     6301 cccgaccagc gtcaatccac ttgccgttac cagaaatgcc accaccgccg cgtcgcgctc
     6361 acgctcatta tgcagcgcct gatacaaact gccgccaatg gtactcaaca gcgccagacc
     6421 tgccagcatc tggatccaac ttacgggcag ggcagccatc atcccggtaa tggcactacc
     6481 aaacagacct gcgagcaaat agaaaatgcc tgcaacggca gctgccagcc aacgttgatc
     6541 tttatccgga tgcgcttccg ggctttggca aatagccgcg gtgattgccg caataccgac
     6601 ggaataaacg ccgaaagggg aaaaaaccag tgccagcaat ccagtaaata caattaatgg
     6661 cgaaacagga gttgaatatc cggctgcttt cattgctgcg atacccggtg cgttttgcga
     6721 tgccatcgtc accagaaaaa gggggagtgc aacgctcagg ctgcgagcaa acgaaaaatc
     6781 aggggtaata taagagggga gaacgggttt aaagacaaca tcagttgtga caacgtcacc
     6841 ttgcgcgata acgctcacga tcccaataat catcgcggca attaccgcat agcgcggcgc
     6901 aacggccttg gttgccagcc ataccagcaa catacttcca cacaacgtaa attgaccgtc
     6961 cagactggca accgcctgta aaccaaagcg taataaaatc ccggcaagca ttgccgccgc
     7021 aagcgagtgt ggaataatgc gcatcagacg agcaaagagt cccgttatgc cgcagaggac
     7081 tattaacgcg ttggtgacaa taaaaacgcc gatggcttcg ttaagtgtta gtccctgcaa
     7141 tccggtgacc aacaaagccg cgccaggcgt tgaccatgcg gtgagaacag gtacgcgata
     7201 ccataatgtc agagtcagcg tactgacgcc cattgccagc cccagcgccg tcatccagcc
     7261 agagatttgt gcagtggtgg ctccggcgac aatcgctgct tgccagatta ttgccgctga
     7321 actggcgtag ccaattaata ccgccagaaa ccccgccagt agcgtgggtg gaggaacaga
     7381 aaacagacgc atagtcacct cgtgcgttat agcgtacagg caccgtagca tttgtccgtt
     7441 ataacgcaca agtgataaac ttccgttttg ccggaggagt cgcatggaaa atctcgctcg
     7501 ctttttatcc accacactta aacaactacg tcagcagcgc ggctggagtc tttcgcgact
     7561 ggcagaagcg acgggcgttt ctaaagcaat gttaggacag attgagcgta atgagtccag
     7621 cccgacggtc gcgacattat ggaaaattgc cactgggttg aacgtgccct tttcgacatt
     7681 tatttctccg ccacagtccg ctacgccttc agtttatgat ccacaacagc aggcgatggt
     7741 gatcacttcg ctgtttcctt atgatccaca actctgcttt gaacacttct cgattcagat
     7801 ggcacccggt gcaataagcg aatcgacgcc ccatgagaag ggggtaatcg aacatgtcgt
     7861 cgtcattgat ggacaacttg atctgtgcgt tgatggtgaa tggcagagcc ttaattgtgg
     7921 ggaaggcgct cgatttgctg cagacgtcac gcatatctat cgtaatggtg gggagcaaat
     7981 cgtacatttt cattccctca tccattaccc gcgcagttaa gcgggaaaac tatttcgcaa
     8041 cgtcgcgctt gtggctaaaa tagccgccat ttttcagcta ctggataaga atgtgaccgt
     8101 atcctctcat cgacttgaac tgttaagccc ggcacgcgat gcagccattg cccgcgaagc
     8161 tattttgcac ggtgctgatg ctgtttatat cggcggccct ggttttggtg cccgtcataa
     8221 tgccagtaat agcctgaaag atattgccga gctggtgtcg tttgcccatc gttatggtgc
     8281 aaaaattttc gtcacgctta acaccatttt gcatgatgat gagctggaac ccgcgcaacg
     8341 gctgattact gacctctacc agaccggtgt cgatgcactg attgttcagg atatggggat
     8401 tctggaactt gatattccgc cgattgaact gcacgccagt acgcagtgcg acattcgtac
     8461 agtagaaaaa gcgaagttcc tctctgatgt tggcttcacg cagattgtgc tggcgcgaga
     8521 gctgaatctt gatcagatcc gcgcgattca ccaggccacg gacgcgacca ttgaattctt
     8581 tattcatggc gcactgtgcg tggcctattc gggtcagtgc tacatttctc atgcgcaaac
     8641 agggcgtagc gccaaccgtg gtgattgctc gcaggcgtgc cgtttgccat acacattgaa
     8701 agacgatcag ggacgggtgg tttcctatga aaaacatctg ctgtcgatga aagataacga
     8761 tcagactgcc aacctcggcg cgctgattga tgctggcgta cgctccttca agattgaagg
     8821 gcgttacaaa gatatgagct acgtgaagaa tatcaccgcc cattatcgcc agatgcttga
     8881 tgccattatt gaagaacgtg gcgatctggc gcgcgcttca tcaggtcgta ctgaacattt
     8941 ctttgttcca tcgacggaaa agactttcca ccgtggtagc acagattatt ttgtgaatgc
     9001 ccgtaaaggc gatattggcg cgttcgattc gccgaaattt atcggcctgc cggtaggcga
     9061 agtattgaaa gtggcgaaag atcatctcga tgttgccgtt accgagccac tggcaaatgg
     9121 cgatggcctg aacgtgttga ttaaacgtga agtcgtcggt tttcgtgcca atacggtcga
     9181 gaaaaccgga gaaaatcagt accgcgtctg gcccaatgaa atgccagcag atttgcacaa
     9241 aattcgcccg catcacccac taaaccgtaa tcttgatcat aactggcagc aggcactgac
     9301 aaaaacctcc agcgaacgtc gggtggcggt agacattgaa ctgggcggct ggcaggaaca
     9361 actgattctg accctcacca gtgaagaggg tgtcagcatc acgcatacgc tggacgggca
     9421 gttcgacgaa gccaataacg ccgaaaaagc aatgaacaat ctgaaggatg gtctggcaaa
     9481 actgggtcaa accatctatt acgcccgcga tgtgcaaatt aatttgccgg gtgcgctgtt
     9541 tgtaccaaac agtctgttaa accagttccg ccgcgaagcc gccgacatgc tggatgctgc
     9601 acgtcttgcc agttaccagc gcggcagccg taaaccggtt gctgatcctg cgccggttta
     9661 tccgcaaacg catctgagtt tcctcgcgaa cgtttacaac cagaaagcgc gtgaatttta
     9721 tcatcgctat ggtgtgcagc tgattgacgc ggcgtatgag gcacatgaag agaagggcga
     9781 agtcccggtg atgatcacca agcattgtct gcgctttgcc tttaatttgt gcccgaaaca
     9841 ggcgaaaggc aatatcaaaa gctggaaggc tacgccaatg caactggtta acggcgatga
     9901 agtattaacg ctaaagtttg attgccgccc atgcgagatg cacgtcattg gcaaaatcaa
     9961 aaatcacata ctgaaaatgc ctttaccggg aagcgtagtg gcatccgtaa gtccggatga
    10021 gctgctgaaa acattgccga agcgaaaagg gtaaaacgcc agttttctgg ttactcacca
    10081 ctcattgaat ctgcatgaca ttgcctgccg ggtaaggcgt cacgccgcat ccggcatcaa
    10141 acgactcaac gttgtcccgc ttctggtttg cgcgattttt gccagtaaaa atgctcgcgc
    10201 aaaccttccg ccgactcttc cgccacagca cgcaattcat cgctgtccgc ttcatgacgc
    10261 agctgatgat ccacattctt tacccacaca aattcatgtc ctttgtgccc tgccatgagt
    10321 tgtcctgaga acagcgcaca cgttaataag acaaccgata acgccttcgt aaacatcctg
    10381 ccaccttttt cttacctttt gccgctatga tgccgatcgt ttcttgaggt tattattcag
    10441 ttttgcaaat tagcgcaaag aaattctgga atcttccttc ctgattttgc attgcattct
    10501 gccgttgcgg cgatttagtg ctattttcga gcaaattaca cacggaggta aacactaatg
    10561 tttactttgt tgatatactc agcggcaggg aggcgatgtg aaacaaagcg agttcagacg
    10621 ttggctcgaa tctcagggcg tcgatgtagc gaatggcagc aaccatttga aactcaggtt
    10681 tcatgggagg cgcagtgtca tgccgcgtca cccctgcgat gagattaaag aaccattgcg
    10741 taaagcaatc ctgaaacaac tcggtttgag ttaatcgcca attaaaaagg ttaatgacat
    10801 gcgagggaca gtcgaaatta tgcgttatcc cgtcactctt acacccgcgc cggaaggagg
    10861 ttatatggtt tcttttgtgg atatccctga agcgttgacg cagggcgaaa ctgtcgctga
    10921 agcgatggaa gcggcaaaag atgctttact gaccgcattt gatttttatt ttgaagataa
    10981 cgagcttatc ccgttacctt cgccattaaa tagtcacgat cactttatag aagtaccttt
    11041 gagcgtcgcc tctaaagtat tgctgttaaa tgctttttta cagtcagaaa tcactcagca
    11101 agagttagcc aggcgaattg gcaaacctaa acaggagatt actcgcctat ttaacttgca
    11161 tcatgcgaca aaaatcgacg ccgtccagct cgcggcaaag gcgcttggca aagagttatc
    11221 gctggtgatg gtttaattac agttaacgaa aagttgtcat ttttaacaac tgatatagac
    11281 tgctgaatca tctgcacata attacgattc gataatgaaa aaataccagc agcttgcaga
    11341 acaattacgc gagcagattg cgtcgggtat ctggcaaccc ggcgatcgtt tgccttcgtt
    11401 gcgtgaccag gtggcgcttt ctggcatgag ctttatgact gtcagccatg cctatcagtt
    11461 gctcgaaagt cagggatata ttatcgcacg accgcagtcg ggttattacg ttgcgccaca
    11521 agcaataaaa atgccgaaag cgccagtcat tccagtcact cgagatgaag cagtcgatat
    11581 caacacttat atttttgata tgttgcaggc cagtcgcgat ccgtcggtcg ttccgtttgc
    11641 ctcggccttt cccgacccgc gacttttccc cctccaacaa ctaaaccgct cgctggcgca
    11701 ggtaagcaaa accgccacgg cgatgagcgt gattgaaaac ttgccgccag gaaacgcaga
    11761 actgcgtcag gctattgcct gtcgctatgc cttacagggc atcaccattt ctcctgatga
    11821 aattgtcatt actgccgggg cgttagaggc attaaacctc agtttgcaag cggtaactga
    11881 accgggcgat tgggtgatag tagagaatcc ttgtttctac ggtgcgttgc aggcgctgga
    11941 gcggctacgg ctgaaggcgt tatcggtggc gacggatgtt aaagaaggga tagatcttca
    12001 ggcgctggaa ctggcgttgc aggagtatcc ggtgaaagcg tgctggctga tgactaatag
    12061 ccagaatcca ctcggattta ccttaacgcc gcaaaaaaaa gcacaactgg tggcgttgct
    12121 caatcaatac aacgtaacgc tgattgaaga tgacgtttac agcgaacttt attttggacg
    12181 ggaaaaaccg ctgcctgcga aagcgtggga tcgccacgat ggcgttttgc attgctcttc
    12241 gttttcgaaa tgtctggtgc ctggttttcg tattggttgg gtcgccgccg gaaaacatgc
    12301 acgtaaaatt caacgcttgc agttgatgag tacgctttcc accagctcac cgatgcagct
    12361 tgcgctggtg gattaccttt ccacgcgccg atacgacgcc catcttcgtc gcctgcgtcg
    12421 ccagcttgcg gaacgtaaac aacgtgcctg gcaggcactg ctgcgttatc tgcctgcgga
    12481 agtgaaaatt catcataatg acagcggtta ttttctctgg ctggagcttc ccgaaccgtt
    12541 agatgcgggc gaattaagcc aggcggcact ggcgcatcat atcagtattg cgccgggtaa
    12601 aatgttttct accggtgaaa actggtcacg ttttttccgt tttaataccg cgtggcagtg
    12661 gggagagcgt gaagaacagg cggtaaaaca attaggcaaa cttattcaag aacggctgta
    12721 atagcgttta atttaattcc tcttagattg ggtaatatga atttcgaata gcagtcatat
    12781 ttcctaactc cttgactata ctccagaaga taaccttaca gacggcataa tgcgcggtag
    12841 ctcacaacct gattaaattt tctcaggggc gaaggtgtgc ctgcaagccg ccgtctatgg
    12901 ttaaacaagg agatattttt acggcacggc ggctgaacaa ttaattacga caggagtaag
    12961 accttatgag caagacattt gcccgcagca gcctgtgtgc gctcagcatg acaataatga
    13021 ccgctcacgc cgccgaaccg cctaccaatt tagataaacc ggaagggcga ctggatatta
    13081 tcgcctggcc gggatacatc gaacgcggac aaactgataa acaatacgac tgggtaacgc
    13141 agttcgaaaa agagacaggc tgcgcggtga atgtgaaaac cgccgcgact tccgatgaaa
    13201 tggtcagtct gatgaccaaa gggggttacg atctggttac ggcatccggc gatgcctcgc
    13261 tgcgtttgat tatgggtaaa tgcgtgcagc cgattaatac cgcattgatt cccaactgga
    13321 aaacgctcga tccgcgcgtg gttaaaggcg actggtttaa cgtgggcggc aaagtctatg
    13381 gcacgccata tcaatggggt ccgaacctgc tgatgtacaa cactaaaacc ttcccgacgc
    13441 cgccggatag ctggcaagtg gtttttgttg agcaaaatct gccggacggc aagagcaata
    13501 aaggccgcgt tcaggcttat gatggcccta tctacattgc ggacgctgcg ttgttcgtta
    13561 aagccactca gccgcagttg ggcatcagcg atccgtatca actcaccgaa gaacagtacc
    13621 aggcggtgct gaaagtgctg cgtgatcaac atagtttgat ccatcgctac tggcatgaca
    13681 ctaccgtgca aatgagcgat ttcaaaaacg agggtgtggt tgcttccagt gcctggccct
    13741 atcaggccaa cgccctgaaa gccgaaggcc agcctgtcgc taccgttttc ccgaaggagg
    13801 gtgttaccgg ttgggctgat accaccatgc tgcatagcga agcgaaacat ccggtttgcg
    13861 cctacaaatg gatgaactgg tcattaacgc caaaagtgca gggcgatgtg gcggcctggt
    13921 ttggctcgtt accggtagtg ccggaagggt gtaaagccag tccgttatta ggcgaaaaag
    13981 gttgtgaaac caacggtttt aactatttcg acaaaatcgc cttctggaaa acgcctatag
    14041 cagaaggggg caagtttgtt ccctacagtc gctggacgca ggattacatt gccattatgg
    14101 gcggtcgcta acttcgctgg ggtgctttat gacgtacgca gtggagtttg acaacgtctc
    14161 gcggttgtac ggtgacgtgc gcgcagtaga tggcgtcagt attgcgataa aagatggtga
    14221 gttcttctct atgctggggc cgtccggctc cggcaaaacc acctgcctgc gcctgattgc
    14281 tggcttcgaa cagctttccg gcggggctat ctctatcttt ggtaaacccg ccagcaatct
    14341 gccaccgtgg gagcgggacg tgaatactgt cttccaggac tacgcgctat ttccgcatat
    14401 gtcgattctt gacaacgtcg cctatggtct gatggtcaaa ggcgtgaata aaaaacagcg
    14461 gcatgcgatg gcgcaagagg cgctggagaa agtggcgttg gggtttgtac agcaacgtaa
    14521 accgtcacaa ctttctggag gtcagcgcca gcgagtcgcc atcgccagag cactggtgaa
    14581 tgaaccgcgc gtattgctgt tggatgaacc gctcggcgca ctggatctca aattgcgtga
    14641 gcagatgcag ctggaactga aaaagctgca acagtctctc ggtatcactt ttatcttcgc
    14701 tacccacgat cagggcgaag cgttatcgat gtccgatcgt tggcggtttt caataatgga
    14761 cgcattgagc aggtcgattc cccgcgcgat ctctatatgc gcccgcgcac gccgtttgtt
    14821 gccgggttcg ttggtacatc gaatgttttt gatggactga tggcagagaa actttgtggc
    14881 atgacgggaa gcttcgccct gcgaccggaa catatccgcc tcaacaccct tggtgaactg
    14941 caggccaatg gcacgatcca ggcggtgcaa tatcagggtg cggcaactcg ttttgaactg
    15001 aaattgaacg gcggtgaaaa actgcttgtg agtcaggcca atatgacagg cgaagaactg
    15061 cctgccacgc tcacgcccgg acaacaggtg atggtttcct ggtcgcgtga tgtgatggtg
    15121 ccgctggttg aggagaggtg aatggcgatg aatgtattgc aatcaccttc acgtccaggt
    15181 ctgggtaagg tgtccggttt cttctggcgt aatccggggc tggggctgtt tttactgctg
    15241 cttggcccgc taatgtggtt tggcattgtc tatttcggct cgctgctgac actgttatgg
    15301 cagggatttt atacttttga cgatttcacc atgtcggtaa cgccggaact gacgctggcg
    15361 aatatccgtg cgctgtttaa tccggcgaat tacgacatca ttctccgcac gctgactatg
    15421 gctgtggcag tcactatcgc cagcgccatt ctggcttttc caatggcgtg gtatatggcg
    15481 cgctatacca gcgggaaaat gaaagcgttt ttatattgcg gtaatgttgc cgatgtgggc
    15541 gagctacatt gttaaagcct atgcctggac gttattgctg gcaaaagatg gcgtggctca
    15601 gtggttttta caacatcttg ggctggaacc actgctgact gcgttcctta cattacctgc
    15661 ggtgggcggc aatacgctgt caacttccgg gctggggcgc tttctggtgt ttctctatat
    15721 ctggctgccg ttcatgatcc tgcccgtgca ggcggcgctt gagcgtttgc cgccgtcatt
    15781 gttgcaggcg tcagctgatc tcggcgcacg tccacgacaa acctttcgct atgtggtgct
    15841 gccgctggct ctatctttac cttctcactc acactgggcg attttatcgt cccgcagctg
    15901 gttggcccgc caggatattt tatcggcaat atggtttatt cccagcaggg ggcgattggc
    15961 aatatgccga tggcggcggc attcaccctg gtgccgatta ttctcatcgc actgtacctg
    16021 gcgttcgtga aacgtctggg agcgttcgat gcactctgaa cgcgcaccgt ttttcctcaa
    16081 actggcggcc tggggcggcg ttgttttcct acattttccc atcctgataa tcgccgccta
    16141 tgcgtttaac actgaagatg cggcgtttag ttttccaccg caggacctga cgctgcgctg
    16201 gtttagcgtg gcagcacagc gtagtgatat tcttgatgcc gtgacactgt cacttaaagt
    16261 ggcggcgctg gcgacattaa tcgcgctggt gttagggacg ctggcagctg ccgcgctgtg
    16321 gcgacgagac tttttcggca aaaacgccat ttcgctgtta ctgctgctgc ccattgcgct
    16381 gccgggcatt gtcactggtc tggcgttatt aaccgccttt aaaaccatca atctggagcc
    16441 gggatttttc accatcgtgg tcggtcatgc gactttttgt gtagttgtgg tttttaacaa
    16501 tgtcatcgcc cgttttcgcc gcacctcctg gagtctggtt gaggcgtcaa tggatcttgg
    16561 ggccaatggc tggcaaacct tccgctacgt agtgttgccg aatctcagtt cggcgttact
    16621 ggcaggagga atgctggcgt ttgccttgtc gttcgatgaa atcatcgtta cgacctttac
    16681 ggcaggtcat gaacgaacgt taccgttgtg gttgctcaat cagcttgggc gaccgcgtga
    16741 tgtaccggta actaacgtgg tggcactgct ggttatgttg gtaacaacct tgccgatcct
    16801 ggggcctggt ggctaacccg cgaaggcgac aatggtcaat aaccactgat acaggaatat
    16861 gctatgcaac ataagttact gattaacgga gaactggtta gcggcgaagg ggaaaaacag
    16921 cctgtctata atccggcaac gggggacgtt ttactggaaa ttgccgaggc atccgcagag
    16981 caggtcgatg ctgctgcgcg cgcggcagat gcagcatttg ccgaatgggg gcaaaccacg
    17041 ccgaaagtgc gtgcggaatg tctgctgaaa ctggctgatg ttatcgaaga aaatggtcag
    17101 gtttttgccg aactggagtc ccgtaattgt ggcaaaccgc tgcatagtgc gttcaatgat
    17161 gaaatcccgg cgattgtcga tgtttttcgc tttttcgcgg gtgcggcgcg ctgtctgaat
    17221 ggtctggcgg caggtgaata tcttgaaggt catacttcga tgatccgtcg cgatccgttg
    17281 ggggtcgtgg cttctatcgc accgtggaat tatccgctga tgatggccgc gtggaaactt
    17341 gctccggcgc tggcggcagg gaactgcgta gtgcttaaac catcagaaat taccccgctg
    17401 accgcgttga agttggcaga gctggcgaaa gatatcttcc cggcaggcgt gattaacata
    17461 ctgtttggca gaggcaaaac ggtgggtgat ccgctgaccg gtcatcccaa agtgcggatg
    17521 gtgtcgctga cgggctctat cgccaccggc gagcatatca tcagccatac cgcgtcgtcc
    17581 attaagcgta ctcatatgga acttggtggc aaagcgccag tgattgtttt tgatgatgcg
    17641 gatattgaag cagtggtcga aggtgtacgt acatttggct attacaatgc tggacaggat
    17701 gaggtgtact ggcaatagcg gacactacca ttt
//
LOCUS       DAJVTL010000095        17388 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.096, whole genome shotgun sequence.
ACCESSION   DAJVTL010000095 DAJVTL010000000
VERSION     DAJVTL010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17388
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.096"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            123..1031
                     /gene="cysD"
                     /locus_tag="OQQ26_003002"
     CDS             123..1031
                     /gene="cysD"
                     /locus_tag="OQQ26_003002"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HCS1858378.1"
                     /translation="MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
                     FIHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
                     TSERQGRVIDRDQAGSMELKKRQGYF"
     gene            1033..2460
                     /gene="cysN"
                     /locus_tag="OQQ26_003003"
     CDS             1033..2460
                     /gene="cysN"
                     /locus_tag="OQQ26_003003"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HCS1858379.1"
                     /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
                     SMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
                     RVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
                     QSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNG
                     IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVAPSEFSA
                     FELELNALVRRHFPHWGARDLLGDK"
     gene            2460..3065
                     /gene="cysC"
                     /locus_tag="OQQ26_003004"
     CDS             2460..3065
                     /gene="cysC"
                     /locus_tag="OQQ26_003004"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HCS1858380.1"
                     /translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
                     AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
                     VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
                     GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIISS"
     gene            3115..3438
                     /locus_tag="OQQ26_003005"
     CDS             3115..3438
                     /locus_tag="OQQ26_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HCS1858381.1"
                     /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
                     IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
                     MWLLG"
     gene            3632..3943
                     /gene="ftsB"
                     /locus_tag="OQQ26_003006"
     CDS             3632..3943
                     /gene="ftsB"
                     /locus_tag="OQQ26_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HCS1858382.1"
                     /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
                     KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
                     R"
     gene            3962..4672
                     /gene="ispD"
                     /locus_tag="OQQ26_003007"
     CDS             3962..4672
                     /gene="ispD"
                     /locus_tag="OQQ26_003007"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HCS1858383.1"
                     /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
                     LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDVQWV
                     LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQENT"
     gene            4672..5151
                     /gene="ispF"
                     /locus_tag="OQQ26_003008"
     CDS             4672..5151
                     /gene="ispF"
                     /locus_tag="OQQ26_003008"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HCS1858384.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
     gene            5148..6197
                     /gene="truD"
                     /locus_tag="OQQ26_003009"
     CDS             5148..6197
                     /gene="truD"
                     /locus_tag="OQQ26_003009"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HCS1858385.1"
                     /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
                     LVRILKNGCNTRFVADALAKFLKIHSREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
                     AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
                     GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
                     VVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREVLAFEQ
                     AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
                     RELINTTGDYAHIAE"
     gene            6178..6939
                     /gene="surE"
                     /locus_tag="OQQ26_003010"
     CDS             6178..6939
                     /gene="surE"
                     /locus_tag="OQQ26_003010"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HCS1858386.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
                     PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
                     EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
     gene            6933..7559
                     /gene="pcm"
                     /locus_tag="OQQ26_003011"
     CDS             6933..7559
                     /gene="pcm"
                     /locus_tag="OQQ26_003011"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HCS1858387.1"
                     /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
                     WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
                     VERIKGLQWQARRRLKNLDLYNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
                     QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            7699..8838
                     /gene="nlpD"
                     /locus_tag="OQQ26_003012"
     CDS             7699..8838
                     /gene="nlpD"
                     /locus_tag="OQQ26_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HCS1858388.1"
                     /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
                     ANTNSGMLITLPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENG
                     RIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVG
                     QTLQVGNASGTPITGGNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSA
                     NKMLPNNKPTATTVTAPVTGPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFVASE
                     GGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLV
                     REQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            8901..9893
                     /gene="rpoS"
                     /locus_tag="OQQ26_003013"
     CDS             8901..9893
                     /gene="rpoS"
                     /locus_tag="OQQ26_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000081498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HCS1858389.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(10014..10421)
                     /locus_tag="OQQ26_003014"
     CDS             complement(10014..10421)
                     /locus_tag="OQQ26_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HCS1858390.1"
                     /translation="MALRNKAFHQLRQLFQQHTARWQHELPDLTKPQYAVMRAIADKP
                     GIEQVALIEAAVSTKATLAEMLARMENRGLVRREHDVADKRRRFVWLTAEGEKLLAAA
                     IPIGDCVDEEFLGRLSGEEQELFMQLVRKMMST"
     gene            10568..11161
                     /locus_tag="OQQ26_003015"
     CDS             10568..11161
                     /locus_tag="OQQ26_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HCS1858391.1"
                     /translation="MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIE
                     LETPYSARDVAALADFSHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGL
                     VGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
                     IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE"
     gene            11161..12588
                     /locus_tag="OQQ26_003016"
     CDS             11161..12588
                     /locus_tag="OQQ26_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HCS1858392.1"
                     /translation="MAFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGD
                     GAPALWFDNIRGFTDARVAMNIIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPIA
                     PERRANPAWAQNTVDGEEINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQ
                     NVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATP
                     LKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGAIESRKREIEGPFGEFT
                     GHYSGGRNMTVVRIDKVSYRTRPIFESLYLGMPWTEIDYLMGPATCLPLYQQLKAEFP
                     EVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFN
                     LPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHY
                     SQPVVDLPETKAWAEKLTAMLAARK"
     gene            12599..12835
                     /locus_tag="OQQ26_003017"
     CDS             12599..12835
                     /locus_tag="OQQ26_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858393.1"
                     /translation="MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRT
                     SREHYPEAFRMTQKDIDDAPMVPSIPPLLAEGKR"
     gene            complement(12874..14238)
                     /locus_tag="OQQ26_003018"
     CDS             complement(12874..14238)
                     /locus_tag="OQQ26_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family transporter"
                     /protein_id="HCS1858394.1"
                     /translation="MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
                     IPAGEVGKVMIAGIGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
                     AALTLAAFFLGIPVFFDVGFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
                     HPGPVAAAGLLHADIGWLTIIGIAISIPVGVVGYFAAKIINKRQYAMSVEVLEQMQLA
                     PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGS
                     PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFDKVLVES
                     GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
                     VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
                     WAVI"
     gene            complement(14327..15103)
                     /locus_tag="OQQ26_003019"
     CDS             complement(14327..15103)
                     /locus_tag="OQQ26_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HCS1858395.1"
                     /translation="MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYDYSTLQ
                     IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV
                     HVMAGVVPAGEDAERYRAVFIDNLRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQ
                     ALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGE
                     INYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR"
     gene            complement(15108..15746)
                     /locus_tag="OQQ26_003020"
     CDS             complement(15108..15746)
                     /locus_tag="OQQ26_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HCS1858396.1"
                     /translation="MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNL
                     LATPTGSCLGNFDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHST
                     WSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAF
                     LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS"
     gene            complement(15743..17005)
                     /locus_tag="OQQ26_003021"
     CDS             complement(15743..17005)
                     /locus_tag="OQQ26_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HCS1858397.1"
                     /translation="MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAID
                     ALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDAL
                     MDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEA
                     QSTGCCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPL
                     VTGGSGLAIGLARQWAQENGNQARKAGHPLAGRGVVLSGSCSQMTNRQVAHYRQIAPA
                     REVDVARCLSIETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKAS
                     QAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPGVPWVNAL
                     DKPVSLALKSGNFGDEAFFSRAQREFLS"
     gene            complement(17002..>17388)
                     /locus_tag="OQQ26_003022"
     CDS             complement(17002..>17388)
                     /locus_tag="OQQ26_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HCS1858398.1"
                     /translation="STVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
                     NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
                     NAGYGKEDDSAVIKIFSGITLPGAKS"
BASE COUNT         4181 a         4443 c         4760 g         4004 t
ORIGIN      
        1 gccaaatcgt tattccgtta aggaactact cattctaatt ggtaatttca ttcgttctct
       61 tacgctccct atagtcgaaa catctgatgg caagaaaata gcggtattgc aaaggaacgg
      121 ttatggatca aaaacgactt actcacctgc ggcaactgga ggcggaaagc atccacatta
      181 ttcgcgaggt ggcggcagaa ttctcaaatc cggtgatgct ctactctatc ggtaaagatt
      241 ccagcgtcat gctgcatctg gcgcgcaagg cgttttatcc aggtacgctg cctttcccgt
      301 tgctgcatgt cgataccggc tggaaattcc gcgagatgta tgagttccgc gatcgtactg
      361 ctaaagccta cggctgcgag ctgctggtgc ataaaaaccc ggaaggcgtg gcgatgggga
      421 ttaatccatt catacacggc agcgcgaaac ataccgatat tatgaaaact gaaggcctga
      481 aacaggccct gaataaatac ggttttgatg ccgccttcgg tggtgcgcgc cgtgatgaag
      541 agaaatcccg cgctaaagag cgaatctact ctttccgtga ccgcttccat cgctgggatc
      601 cgaaaaatca gcgcccggag ctgtggcaca actacaacgg gcaaattaac aaaggtgaaa
      661 gcatccgcgt cttcccgctc tctaactgga ccgagcagga tatctggcaa tacatctggc
      721 tggaaaatat cgacattgtg ccgctgtatc tcgctgcgga acgtccggtt ctggaacgcg
      781 acggtatgtt gatgatgatt gatgacaacc gtatcgacct gcaaccgggc gaagtgatta
      841 aaaaacggat ggtgcgtttc cgtacgctgg gctgctggcc gctgaccggt gcggtggagt
      901 caaatgcaca aacactgccg gaaatcatcg aagagatgct ggtttccacc accagtgaac
      961 gtcagggccg cgtgattgac cgcgaccagg cggggtctat ggagctgaaa aaacgtcagg
     1021 ggtattttta agatgaacac cgcacttgca caacaaatcg ccaatgaagg cggcgtcgaa
     1081 gcctggatga ttgcgcaaca acataaaagc ctgctgcgtt ttctgacctg tggtagcgtc
     1141 gatgacggca aaagtaccct gattggtcgc ctgctgcacg atacccgcca aatctacgaa
     1201 gatcagctct catcgctgca taacgacagt aagcgtcacg gcacccaggg cgaaaaactg
     1261 gatctggcgc tgctggtgga cggcctgcaa gctgagcgcg aacagggcat caccattgac
     1321 gtggcttacc gttatttctc taccgagaag cgtaaattta ttatcgccga caccccaggg
     1381 cacgagcagt acacccgcaa tatggcgact ggcgcatcga catgtgaact ggcgatctta
     1441 ctgatcgatg cccgtaaagg cgtgctcgat caaacccgtc gtcacagttt tatctccaca
     1501 ctgttgggga tcaaacatct ggtcgtggcg atcaacaaaa tggatctggt ggattacagt
     1561 gaagagacgt tcacccgtat tcgtgaagat tatttgacct ttgccgggca gctgccgggt
     1621 aatctggata tccgctttgt gccgctctct gcactggaag gcgacaacgt ggcttcgcaa
     1681 agtgaaagta tgccgtggta cagcggtcca acactgctcg aagtgctgga aaccgtggag
     1741 atccagcgag tggtggatgc ccagccaatg cgcttcccgg tgcagtatgt taaccgcccg
     1801 aatctcgatt ttcgtggtta cgccggaacg ctggcatccg gtcgcgtgga agtcgggcaa
     1861 cgtgtaaaag tgctgccctc tggtgtggaa tcaaacgtcg cgcggatcgt gacttttgat
     1921 ggtgatcgcg aagaagcctt tgccggagaa gcgatcaccc tggtgctgac ggatgaaatc
     1981 gacatcagcc gtggtgatct gctgctggcg gcagacgaag cgttaccagc tgtgcagagt
     2041 gcgtcggtgg atgtggtatg gatggcggaa cagccgcttt ctccagggca gagttacgac
     2101 atcaaaattg ccggtaagaa gacgcgcgcg cgtgttgatg gcattcgcta tcaggttgat
     2161 attaataacc ttacccagcg tgaagttgaa aacctgccac tgaatgggat cggcctcgtg
     2221 gatctcacct ttgacgagcc gctggtgtta gatcgttatc aacaaaatcc ggtgacgggt
     2281 gggctgattt ttatcgatcg cctgagcaac gtgactgttg gtgccggtat ggtgcatgag
     2341 ccgaaaaacg aggccgccgt tgcgccatct gaattcagtg cattcgaact ggaattgaat
     2401 gctctggttc gccgccactt tccgcactgg ggcgcgcgcg atttgctggg ggataaataa
     2461 tggcgctgca tgacgaaaac gtcgtctggc atagccatcc ggtcactgtg caacaacgcg
     2521 agctacacca cggtcatcgt ggtgtagtgc tgtggtttac cggcctctcc gggtccggta
     2581 aatcaacggt cgccggggcg ctggaggagg cgttacataa actcggcgtc agtacgtatc
     2641 tgctggatgg cgataatgtt cgccacggat tatgcagcga tctcggtttt agcgatgccg
     2701 atcgtaaaga gaatatccgt cgggtcggtg aagtggcgaa tttgatggtt gaagccggac
     2761 tggtggtgct gaccgcattt atctcgccac accgcgccga acgccagatg gttcgcgaac
     2821 gcgtaggaga agggcgcttt atcgaagtgt ttgtcgatac gccgctggcg atttgcgaag
     2881 cccgcgatcc aaaaggctta tataagaaag cgcgtgccgg tgaactgcgc aactttacgg
     2941 gaatagattc cgtttatgaa gcgcctgaat cggcagaaat tcatctcaat ggtgaacaat
     3001 tagtaacaaa tttggtacag caattattag atctgttgag acagaacgat attatcagtt
     3061 cctgagacac caccgggttt ccatgcccgg ttcgtcaaag taacaggatc aaatatgcgt
     3121 aatagccata acattacact aacaaataac gacagcctta ctgaggatga agaaaccaca
     3181 tggtcactgc ctggtgccgt ggtcggtttt atctcttggt tatttgcact ggcgatgccg
     3241 atgttgattt atggctctaa cacgctgttc ttctttatct acacctggcc tttctttctg
     3301 gcgctgatgc ccgtcgcggt agtggtgggg attgcgctgc attcattgat ggacggaaag
     3361 ctacgctaca gtattgtttt caccctggtg acagtaggca ttatgtttgg cgcactgttt
     3421 atgtggctac tgggctaatt tgtactttcc cgtctcctct gttcataatt caaaccgtaa
     3481 ctaataatga gattatgttc tgcacgccct gggtatacgt aacaatggac aaatgtggta
     3541 catttgcccg cgttgtcgcg gtatccccaa cagaggatgt agagtcgtct tcggatgcat
     3601 gggatgatga tgccgttttt cagggggcag gatgggtaaa ctaacgctgc tgttgctggc
     3661 tattctggtc tggctacagt attcgctgtg gttcggtaag aacggtatac atgactatac
     3721 ccgcgtcaat gatgatgtgg cggcacagca agctacaaac gcgaaactta aagcgcgaaa
     3781 cgatcaactt tttgccgaaa ttgacgatct caatggcggc caggaggcgc tcgaagagcg
     3841 tgcgcgtaat gaactcagca tgaccaggcc gggcgaaact ttttatcgtc tggtgcctga
     3901 cgcgtcgaag cgcgcacagt ctgcggggca aaacaatcga taaatcagcc cgggaattaa
     3961 catggcaacc actcatttgg atgtttgcgc cgtggttccg gcggccggat ttggccgtcg
     4021 aatgcaaacg gaatgtccta agcaatatct ctcaatcggt aatcaaacca ttcttgaaca
     4081 ctcggtgcat gcgctgctgg cgcatccccg ggtgaaacgt gtcgtcattg ccataagtcc
     4141 tggcgatagc cgttttgcac aacttcctct ggcgaatcat ccgcaaatca ccgttgtaga
     4201 tggcggtgat gagcgtgccg attccgtgct ggcaggtctg aaagccgctg gcgatgtgca
     4261 gtgggtattg gtgcatgacg ccgctcgtcc ttgtttgcat caggatgacc tcgcgcgatt
     4321 gttggcgttg agcgaaacaa gccgcacggg agggatcctc gccgcaccag tgcgcgatac
     4381 tatgaaacgt gccgaaccgg gcaaaaatgc cattgctcat accgttgatc gcaacggctt
     4441 atggcacgcg ctgacgccgc aatttttccc tcgtgagctg ttacatgact gtctgacgcg
     4501 cgctctaaat gaaggcgcga ctattactga cgaagcctcg gcgctggaat attgcggatt
     4561 tcatccgcag ttggtcgaag gccgcgcgga taacattaaa gtcacgcgcc cggaagattt
     4621 ggcactggcc gagttttacc tcacccgaac catccatcag gagaatacat aatgcgaatt
     4681 ggacacggtt ttgacgtaca cgcctttggc ggtgaaggcc caattatcat tggtggcgta
     4741 cgcattcctt acgaaaaagg attgctggcg cattctgatg gcgacgtggc gcttcatgcg
     4801 ttgaccgatg cattgcttgg cgcggcggcg ctgggggata tcggcaaact gttcccggat
     4861 accgatccgg catttaaagg tgccgatagc cgcgagctgc tacgcgaagc ctggcgtcgt
     4921 attcaggcga agggttatac ccttggcaac gtcgatgtca ctatcatcgc tcaggcaccg
     4981 aagatgttgc cgcacattcc acaaatgcgc gtgtttattg ccgaagatct cggctgccat
     5041 atggatgatg ttaacgtgaa agccactact acggaaaaac ttggatttac cggacgtggg
     5101 gaagggattg cctgtgaagc ggtggcgcta ctcattaagg caacaaaatg attgagtttg
     5161 ataatctcac ttacctccac ggtaaaccgc aaggcaccgg gctgctgaaa gccaatccgg
     5221 aagactttgt ggtggtggaa gatttgggct ttgagcctga tggtgaaggt gagcatattc
     5281 tggttagaat cctcaaaaac ggctgcaata cccgttttgt ggcggatgca ctggcgaaat
     5341 tcctgaaaat tcattcccgt gaagtcagct tcgctgggca aaaagacaaa catgctgtaa
     5401 cggaacagtg gttatgtgct cgcgtgccgg gcaaggaaat gcccgatctg agcgcctttc
     5461 aactggaagg ctgccaggtg ctggagtatg cgcggcacaa gcgcaagctg cgtttagggg
     5521 cgctgaaagg taacgccttt accctggttc tgcgcgaagt gagcaatcgc gatgacgttg
     5581 aacaacgtct gatcgatatt tgcgtaaaag gtgtaccgaa ctacttcggt gcccaacgtt
     5641 ttgggattgg cggtagcaac ttgcagggcg cgctgcgctg ggcgcaaacc aatactccgg
     5701 tgcgcgatcg caataaacgg agtttttggt tgtcggcagc ccgcagtgcg ttgtttaatc
     5761 agattgttgc tgagcgcctc aaaaaagcag acgttaatca agttgttgac ggcgatgcgc
     5821 tacaattagc cggacgtggt agctggtttg tagcaaccac cgaagaactg gcggaattac
     5881 agcgtcgcgt caacgataaa gagctgatga taaccgccgc attgccgggc agtggcgaat
     5941 ggggaactca gcgtgaagtg ctggcattcg aacaagcagc tgtcgccgca gaaactgaat
     6001 tacaagcttt actggtgcgc gaaaaagttg aagccgcgcg cagagcgatg ctgctgtatc
     6061 cgcaacaatt aagctggaat tggtgggatg acgtcaccgt agagatccgt ttctggcttc
     6121 cggcgggtag ttttgcaacc agcgttgtca gggaacttat caacacaaca ggtgattatg
     6181 cgcatattgc tgagtaatga tgacggggta catgcacccg gtatacaaac gctggcgaaa
     6241 gccttgcgtg agtttgctga cgttcaggtg gtcgcccccg atcgtaaccg cagcggcgct
     6301 tcaaattctc tgacactgga atcctccctg cgcacgttta cctttgaaaa tggtgatatt
     6361 gctgtgcaaa tgggaacccc gaccgattgc gtctatcttg gcgtgaatgc tctgatgcgt
     6421 ccgcgcccgg acattgttgt gtccggaatt aacgccgggc cgaatctggg ggatgatgtt
     6481 atttattccg gtacggtagc cgccgcgatg gaaggccgtc atttaggttt tccggcgctt
     6541 gccgtctcgc ttgacgggca taaacattac gacactgccg cggcggtaac ctgttcaatt
     6601 ttgcgcgcac tgtgtaaaga gccgttgcgc accgggcgta ttcttaatat taacgttccg
     6661 gatttaccct tggatcaaat caaaggtatt cgcgtgacgc gctgcggtac acgacatccg
     6721 gcagatcagg tgatcccaca gcaagatccg cgcggcaata cgctgtactg gattggcccg
     6781 ccgggcggta aatgtgatgc cggtccgggg accgattttg ctgcggtaga tgagggctat
     6841 gtctccatca cgccgctgca tgtggattta actgcgcata gcgcgcaaga tgtggtttca
     6901 gactggttaa acagcgtggg agttggcacg caatggtaag cagacgcgta caagcacttc
     6961 tggatcaatt acgtgcgcaa ggtattcagg atgagcaggt gctgaatgca cttgctgccg
     7021 tgccgcgtga aaaattcgtt gatgaagcgt ttgaacaaaa agcctgggac aatatcgcct
     7081 tgccgatagg tcaggggcag acaatttcgc agccgtatat ggtggcgcga atgaccgaat
     7141 tactcgagct gacgccgcag tcgcgggtgc tggaaattgg cactggttcg ggatatcaaa
     7201 cggcaatctt ggcgcatctt gtccagcatg tttgctcggt cgaacggatt aaaggtttgc
     7261 agtggcaggc gcgtcgccgc ctgaaaaatc ttgatttata taatgtttca acccgtcatg
     7321 gcgatggatg gcaaggttgg caggcacgtg cgccgtttga cgctatcatt gttacggcgg
     7381 caccgcctga aattccaact gcgctaatga cgcagctgga cgaaggcggg attctcgtct
     7441 tacccgtagg ggaggagcac cagtatttga aacgggtgcg tcgtcgggga ggcgaattta
     7501 ttatcgatac cgtggaggcc gtgcgctttg tccctttagt gaagggtgag ctggcttaaa
     7561 acgtgaggaa atacctggat ttttcctggt tattttgccg caggtcagcg tatcgtgaac
     7621 atcttttcca gtgttcagta gggtgccttg cacggtaatt atgtcactgg ttattaacca
     7681 atttttcctg ggggataaat gagcgcggga agcccaaaat tcaccgttcg ccgcattgcg
     7741 gctttgtcac tggtttcgct atggctggca ggctgttctg acacttcaaa tccaccggca
     7801 ccggtcagct ccgttaatgg caatgcgcct gcaaatacta attctggtat gttgattacg
     7861 ctgccgccga aaatggggac gacgtctaca gcgcagcaac cgcaaattca gccggtacag
     7921 cagccacaaa ttcaggctac tcaacaaccg caaatccagc cagtgcagcc agtagctcag
     7981 cagccggtac agatggaaaa cggacgcatc gtctataacc gtcagtatgg gaacattccg
     8041 aaaggcagtt atagcggcag tacctatacc gtgaaaaaag gcgacacact tttctatatc
     8101 gcctggatta ctggcaacga tttccgtgac cttgctcagc gcaacaatat tcaggcacca
     8161 tacgcgctga acgttggtca gaccttgcag gtgggtaatg cttccggtac gccaatcact
     8221 ggcggaaatg ccattaccca ggccgacgca gcagagcaag gagttgtgat caagcctgca
     8281 caaaattcca ccgttgctgt tgcgtcgcaa ccgacaatta cgtattctga gtcttcgggt
     8341 gaacagagtg ctaacaaaat gttgccgaac aacaagccaa ctgcgaccac ggtcacagcg
     8401 cctgtaacgg gaccaacagc aagcacaacc gagccgactg tcagcagtac atcaaccagt
     8461 acgcctatct ccacctggcg ctggccgact gagggcaaag tgatcgaaac ctttgtcgct
     8521 tctgaggggg gcaacaaggg gattgatatc gcaggcagca aaggacaggc aattatcgcg
     8581 accgcagatg gccgcgttgt ttatgctggt aacgcgctgc gcggctacgg taatctgatt
     8641 atcatcaaac ataatgatga ttacctgagt gcctacgccc ataacgacac aatgctggtc
     8701 cgggaacaac aagaagttaa ggcggggcaa aaaatagcga ccatgggtag caccggaacc
     8761 agttcaacac gcttgcattt tgaaattcgt tacaagggga aatccgtaaa cccgctgcgt
     8821 tatttgccgc agcgataaat cggcggaacc aggcttttgc ttgaatgttc cgtcaaggga
     8881 tcacgggtag gagccacctt atgagtcaga atacgctgaa agttcatgat ttaaatgaag
     8941 atgcggaatt tgatgagaac ggagttgagg tttttgacga aaaggcctta gtagaagagg
     9001 aacccagtga taacgatttg gccgaagagg aactgttatc gcagggagcc acacagcgtg
     9061 tgttggacgc gactcagctt taccttggtg agattggtta ttcaccactg ttaacggccg
     9121 aagaagaagt ttattttgcg cgtcgcgcac tgcgtggaga tgtcgcctct cgccgccgga
     9181 tgatcgagag taacttgcgt ctggtggtaa aaattgcccg ccgttatggc aatcgtggtc
     9241 tggcgttgct ggaccttatc gaagagggca acctggggct gatccgcgcg gtagagaagt
     9301 ttgacccgga acgtggtttc cgcttctcaa catacgcaac ctggtggatt cgccagacga
     9361 ttgaacgggc gattatgaac caaacccgta ctattcgttt gccgattcac atcgtaaagg
     9421 agctgaacgt ttacctgcga accgcacgtg agttgtccca taagctggac catgaaccaa
     9481 gtgcggaaga gatcgcagag caactggata agccagttga tgacgtcagc cgtatgcttc
     9541 gtcttaatga gcgcattacc tcggtagaca ccccgctggg tggtgattcc gaaaaagcgt
     9601 tgctggacat cctggccgat gaaaaagaga acggtccgga agataccacg caagatgacg
     9661 atatgaagca gagcatcgtc aaatggctgt tcgagctgaa cgccaaacag cgtgaagtgc
     9721 tggcacgtcg attcggtttg ctggggtacg aagcggcaac actggaagat gtaggtcgtg
     9781 aaattggcct cacccgtgaa cgtgttcgcc agattcaggt tgaaggcctg cgccgtttgc
     9841 gcgaaatcct gcaaacgcag gggctgaata tcgaagcgct gttccgcgaa taagtaagca
     9901 tctgtcagaa aggccagtct caagcgaggc tggccttttt tcttttgttt gggaagcatg
     9961 tgtttttgtc gcctggataa gacacgtcag cgtcctaccc ggcaatcagc attctatgtg
    10021 ctcatcatct tgcgcaccag ctgcataaac agctcctgct cttctccact caaacgcccc
    10081 aaaaattcct catccacgca gtcaccaata ggtatcgccg cagcaagtag cttttctcct
    10141 tcggcagtca gccagacaaa gcgtcgccgc ttgtcagcga cgtcatgttc acgtctgact
    10201 aagccacgat tttccattct tgccaacatt tctgctagcg ttgctttggt gctgactgct
    10261 gcttctatca gtgccacctg ttcgatacca ggtttatcag caatggcgcg catcaccgcg
    10321 tactgtggtt tggtcaggtc aggtaactcg tgctgccagc gagccgtgtg ctgctgaaaa
    10381 agctgtcgta actgatggaa cgctttattt cgtaacgcca tgtaaactcc gggctaattc
    10441 tctgtcgcta tcatagcggt tttttagtga cgaagaagat gttgttactt ttcaatcctt
    10501 gccgctgtgg aaatgaagga gtatgttaat aataacgttc gtatgcgaac aattaagaga
    10561 ataagcaatg aaactgatcg tcgggatgac aggggctacc ggtgcgcctc ttggtgtggc
    10621 attactgcaa gcgctgcggg agatgccgaa tgtcgagact catctggtga tgtcgaagtg
    10681 ggcgaaaacc accattgaac tggaaacgcc ttacagcgct cgcgatgttg ctgccctcgc
    10741 agacttcagc cataacccgg cggatcaggc ggcgatcatc tcatccggtt cttttcgtac
    10801 cgacggcatg atcgttattc cgtgcagtat gaaaacgctc gccggtatcc gcgctggtta
    10861 cgccgatggc ctggtagggc gcgcggcgga cgtcgtgctc aaagaaggcc gcaaactggt
    10921 gctggtgccg cgagaaatgc cgcttagcac catccatctc gaaaatatgc tcgcactttc
    10981 acgcatgggc gtggcgatgg tgccgccgat gcctgccttt tataaccatc ccgaaacggt
    11041 agatgacatt gtccaccatg tggtagcccg cgtgctggat caatttggcc tcgaacatcc
    11101 ccacgccagg cgctggcaag gattgccgca ggcccggaat ttttctcagg agaatgaata
    11161 atggcatttg atgatttacg cagcttttta caggcgcttg atgaccacgg ccagttactg
    11221 aaaatcagcg aagaggtgaa cgcggaaccg gatctggcag cagcagctaa cgccaccggg
    11281 cgtatcggcg acggcgcgcc cgcgctgtgg tttgataata ttcgcggctt taccgatgcc
    11341 cgcgtggcga tgaatatcat cggttcctgg cagaaccacg cgatttccct tggcctgcca
    11401 ccaaacaccc cggtcaaaaa gcagattgat gagtttatcc gccgctggga taacttcccg
    11461 attgccccgg agcgccgcgc caatccagcc tgggcgcaga acaccgtcga tggcgaagag
    11521 attaacctgt tcgatatcct gccgctgttt cgtttaaacg atggcgatgg cggtttctat
    11581 cttgacaaag cctgcgtggt ttcccgcgat ccgctcgacc cagataactt cggcaagcag
    11641 aacgtcggca tctaccgcat ggaagtgaag ggcaagcgta agctcggcct gcaaccggtg
    11701 ccgatgcacg atatcgccct gcatctgcat aaagcagaag agcgcggtga agatctgccg
    11761 attgcgatca cgctcggtaa cgatccgatc atcacgctga tgggggccac gccgctgaaa
    11821 tacgatcagt ctgagtatga aatggcaggc gcgctgcgtg aaagcccgta cccgatcgcc
    11881 accgccccgc tgaccggttt tgatgtgccg tggggttcag aagtgatcct cgaaggggct
    11941 atcgaaagcc gtaaacgcga aatcgaaggg ccgttcggtg agtttaccgg gcactactcc
    12001 ggtgggcgca acatgaccgt ggtgcgcatc gataaagtct cttatcgcac caggccgatt
    12061 ttcgaatcgc tgtacctcgg catgccgtgg accgaaatcg actacctgat ggggccagcc
    12121 acctgcctac cgctgtatca acaactgaaa gccgagttcc cggaagtgca ggcggtaaat
    12181 gccatgtaca cccacggcct gctggcgatt atctccacca aaaaacgcta cggcggcttt
    12241 gcccgcgcgg tgggcctgcg tgcgatgacc acgccgcacg gtctgggcta cgtaaagatg
    12301 gtgattatgg tcgatgaaga cgttgacccg ttcaacctgc cgcaggtgat gtgggcgctc
    12361 tcctcgaaag taaacccggc aggggatttg gtgcagttgc cgaatatgtc cgtgctggaa
    12421 ctcgaccctg gctcaagccc ggcggggatc accgacaagc tgattatcga cgctaccacg
    12481 cctgtcgccc cggacaaccg tggtcactac agccagccgg tggtggattt gccggaaacc
    12541 aaagcctggg ctgaaaaact gaccgctatg ctggctgcac gtaaataagg agaagaagat
    12601 gatttgtcca cgttgtgccg atgaacagat tgaagtgatg gcgaaatcgc cggtgaaaga
    12661 tgtctggacg gtatatcagt gccagcattg cctttatacc tggcgcgata ccgaaccgct
    12721 acgccgcacc agtcgcgaac attacccgga agcgttccgc atgacgcaga aagatattga
    12781 tgatgcgcca atggtgccga gcatcccgcc gctgctggcg gaaggtaagc gttaaataaa
    12841 aggtccgatg ctcatcggac ctttttatta aggttaaatc accgcccata cgcaccaggt
    12901 aattaagaat ccggtaaaac cgagaatggt cgttaacact gtccaggttt tcagaccgtc
    12961 tgctaccgac aatcccagat atttggtcac aatccagaac cctgagtcat taatatgtga
    13021 cgcaccaagc ccaccaaagc aggctgccag cgtcaccaat acgcactgaa tcggattcaa
    13081 tcccatcacc gcttctgaga gtaacccgcc ggttgtcagt attgctacgg ttgctgaccc
    13141 ctgcgatgca cgcagcgcca gtgaaataat aaatgcggct ggtaacagag gcaggtcaat
    13201 catttgtaac atgttggcaa gggctttgcc gacgcccgat tccaccagca ctttgtcaaa
    13261 tacccctcca gcaccagtaa ccaaaatcac tactgccgca gtaggaagcg ctgagcccat
    13321 aatgtcgctg gtgtgttgta agctccagcc gcgacgtaaa gccaataacc agaatgccag
    13381 caccagcgca atcattagag ctaccattgg tgagccgatc agctgtagcg taccaagcag
    13441 gggatgcgaa ggcggcatca gtgttgcgga aaccgtaccc gccatgataa tcgcgatagg
    13501 aataacaatt agcgaggtga ccagcgcgac gcccggtgga tttattttat cgcttaattt
    13561 tgtcgcgcct tcctcactgg ccggagccag ttgcatctgt tccagtactt ctactgacat
    13621 tgcatattgg cgtttattga ttattttcgc tgcaaagtag ccaacaaccc ctacgggaat
    13681 agaaatcgca ataccgatga tggttagcca gccgatgtct gcgtggagta accccgctgc
    13741 ggcgacaggg cctggatgcg gcggtaccgc cacatgaaca gtgagcatga tcccagcgac
    13801 aggcaggcca aatttgagtg gcgatatttt ggcaaccttg gcaaaaccgt aaatgattgg
    13861 cgcaagaata ataaagccga catcaaagaa gacgggaata ccgaggaaga acgctgccag
    13921 agtcagcgca gcgatagttc gtttgtcacc taacttgcga ctgaaataat tagccagtga
    13981 ctctgcacca ccagagtgtt cgatcatacg ccccagcata gcgcccagac caataataat
    14041 agtgacggaa ccaagcacac cgcctatccc ggcgatcatc actttaccca cttcgcccgc
    14101 cggtataccc gccgcaagtg cgactaacag gctgacgagg agcagagcaa cgaatggttg
    14161 tacctttgcc ttgatgacca gcagcaacag catgattacg ccagctaacg caatgcataa
    14221 caatgtaatt gtggacatgg gaaaccctgt ctgaaagtta tagttaacct accccatccg
    14281 tagatggggg gatgtatggg tacgttgtaa ttagggattt aacgaattag cgccaggcgt
    14341 caaaccagcc aagcccttct tcggtgaggc cacgaggttt atattcacaa ccgatccagc
    14401 cctgatatcc cacctcatcg aacaggcgga acagccacgg atagttgatt tctccatcgt
    14461 ccggttcatg tcgatcaggt agtccggcaa tttgtacgtg cgcatatttc ccagcgtagt
    14521 cgcggattaa atgcgtcagg ttgccatcta ctttttgcgc atgaaaagta tctagttgaa
    14581 taaacacgtt atctcgcgca acctcttcaa caatagccag tgcctgatac tggctggaga
    14641 agagataatg aggcttaacg ccggggctga gtgcttcaac taatattcgc ttgccgtgtg
    14701 gcgcaaagcg gtcggcagcg tagcggagat tatcgataaa tactgcccgg taccgttcag
    14761 cgtcttcgcc agcgggcacg acgcctgcca tcacatggac ttgttcacaa ttgagcgcca
    14821 atgcatattc cagtgccagg tcgatgtctg cgtgtgcttc gtgctcacgt ccgggaaggg
    14881 cggataatcc ccattccccc gcattaatat ctccgggagc ggtattgaac agcgccagtg
    14941 tcagatggtt ttgctccagt tgcttttgga tttgcagggt ggagtagtca tagggaaaca
    15001 gaaattccac agcatcgaac ccggcttttc gcgctgcggc gaagcgttca ataaaaggca
    15061 cttcggtgaa catcatggat aaattagctg caaaacgagg cattgcatta actccttaat
    15121 tccgcaattt cacctgcggt cagataacgg atcgggcggt caccgagaat aaaaatcagc
    15181 tttgccgttt cctccagctc ttccatattg ttggcggctt cttgcaggct ttcaccgcaa
    15241 accactgggc catgatttgc cagtaaaaaa gcctgattgt ctgctgccag ttccgccaga
    15301 tcctgtgcga tgcgtttatc gcccggtcgg taatagggca ccagcgggac atttcccatc
    15361 cgcatcacca cgtatggtgt gaacggacga ataacgttgc tgctgtccag cccttgcagg
    15421 caggaaagcg ccgtcgacca tgtgctgtgc aaatgcacca ccgctttaca gcgcggattg
    15481 ttgcgataca gcgccagatg aaagagcacc tctttcgagg gtttgtcacc acttaaccat
    15541 tcgccatccg cggcgacttt ggaaagccgc tgcggatcga aattgcccag gcatgaacct
    15601 gtcggtgtcg ccagtaaatt cccgtcaggt aaaagcagcg acagattgcc agccgaaccg
    15661 gttgcatagc cgcgctgaaa gaatgaactg gcaatccgcg tcatctcctc tcgcaaagac
    15721 tgctctactt ttgcgaaatc gctcatgata aaaactctct ttgggctcgt gaaaaaaagg
    15781 cttcatcacc gaagttgcca gatttaaggg cgagtgagac aggcttatcc agtgcgttta
    15841 cccacggcac gccgggggaa atggttgggc caatatgaaa cccttttatt cccaggctct
    15901 gtgtgactac gccggaggtc tcaccgcctg cgacaataaa gcgtgtcacg ccttccgctg
    15961 ctaaccgcgc cgctagttga gaaaacagtg tttctactgc ctgactggct ttttgtgcac
    16021 cgtattgctg ttgaattgct gccaatgcgt cagtgctggc agtggcaaaa accagtggag
    16081 caagtacact ttcctggccc agaacccact ctgccagttc gtgtgcataa gcggccagag
    16141 tttcaattga gaggcagcgt gccacatcaa cttcacgggc tggtgcaatt tgacggtaat
    16201 gtgctacctg gcggttggtc atttgagagc atgaaccgga gagcactacg ccgcgcccag
    16261 cgagcggatg ccctgctttg cgagcctggt taccgttttc ttgcgcccac tgccgggcca
    16321 ggccaatcgc cagaccagaa ccgcccgtta ccagtggggc atcgcgcaag gcttctccct
    16381 gaatttccag atggtgttcg gtcagcgcat caagcaccgc gtagcggtag ccctcttgct
    16441 gtaagcgagc cagctcttga cgaacggcat ccacaccttg ttcgaaaaca tgtgccgaaa
    16501 cgacgccgca gcaccctgtg gattgcgctt caaccagacg gggaagatag ctgtcggtca
    16561 tgggatttac cgggtgatgg cgcatcccgg attcggccag cagttgattc attacgaaca
    16621 aatacccctg ataaaccgta cgtccgttga ccggcagggc cggagagaag accgtaaacg
    16681 gcgtgtcgag agcatccatt aatgcatcgg taaccgggcc gatattacct ttagccgtac
    16741 tgtcgaaagt agagcagtat ttgaaataga tctgtttgca accttgctgt tgcaaccagc
    16801 tcagagccgc cagcgattgc tgtgtggctt caaccaccgg acaggaacgc gttttcaggc
    16861 tgatcaccag tgcgtcgatt gcttccggca ttttacctgt tggaacaccg ttaatttgta
    16921 ccgttggtag accgttttcc accagaaaac tggcgatatc cgtcgcgccg gtaaaatcat
    16981 cggcgataac gccaatcttg atcatgattt cgctcccggt agagtgatgc cagagaaaat
    17041 cttgataact gcgctatcgt cttctttccc gtaacccgcg ttactggcgc tggtgaacat
    17101 attcaatgct gttgaggcca atggcagcgg gaagtgcagg gctttggctg tatcggcaac
    17161 cagaccaaga tccttaacaa aaatatcgac ggctgaatgc ggggtgtaat cgccatccac
    17221 cacatgacgc atccggtttt cgaacatcca ggaatttccg gcggcattgg tcacgacgtc
    17281 atacatcaca tccagcggga tccccgcacg ggctgcaagt gccatcgctt cggctccggc
    17341 agcaatatgt acgcccgcta acaactggtg aataattttt acggtcga
//
LOCUS       DAJVTL010000096        17317 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.097, whole genome shotgun sequence.
ACCESSION   DAJVTL010000096 DAJVTL010000000
VERSION     DAJVTL010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17317
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.097"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..70)
                     /locus_tag="OQQ26_003023"
     CDS             complement(<1..70)
                     /locus_tag="OQQ26_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor cytidylyltransferase"
                     /protein_id="HCS1858399.1"
                     /translation="MSAIDCIITAAGLSSRMGQWKMM"
     gene            173..943
                     /gene="yqeC"
                     /locus_tag="OQQ26_003024"
     CDS             173..943
                     /gene="yqeC"
                     /locus_tag="OQQ26_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311776.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium-dependent hydroxylase
                     accessory protein YqeC"
                     /protein_id="HCS1858400.1"
                     /translation="MKSIVDPSALFIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQA
                     SGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFT
                     PEAIDALVQRPECDVILIEADGSRAMPLKAPDEHEPCIPKSSCCVIAVMGGHILGAKV
                     STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQC
                     ENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN"
     gene            991..2616
                     /locus_tag="OQQ26_003025"
     CDS             991..2616
                     /locus_tag="OQQ26_003025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF2563 family selenium-dependent molybdenum
                     hydroxylase system protein"
                     /protein_id="HCS1858401.1"
                     /translation="MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSI
                     VGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGM
                     RPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAV
                     EALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEE
                     HIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGA
                     GDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSA
                     EAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFI
                     AGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVK
                     LGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSV
                     SDKARAIGGGVLEALMMLMHQGVKATKEVLEVA"
     gene            complement(2657..3589)
                     /gene="arcC"
                     /locus_tag="OQQ26_003026"
     CDS             complement(2657..3589)
                     /gene="arcC"
                     /locus_tag="OQQ26_003026"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HCS1858402.1"
                     /translation="MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIV
                     THGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGI
                     NKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVV
                     ASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLA
                     EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAA
                     ASFARSRAGREALITVLSKAKEGIEGKTGTVICQ"
     gene            complement(3637..5022)
                     /gene="hyuA"
                     /locus_tag="OQQ26_003027"
     CDS             complement(3637..5022)
                     /gene="hyuA"
                     /locus_tag="OQQ26_003027"
                     /EC_number="3.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311773.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-phenylhydantoinase"
                     /protein_id="HCS1858403.1"
                     /translation="MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEI
                     DATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRATACGGTTTIIDHMGFGPNGCR
                     LRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKL
                     NDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAE
                     AIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYD
                     TEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCP
                     NGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVV
                     IIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRF
                     LRRKPFVPPVL"
     gene            complement(5075..6286)
                     /locus_tag="OQQ26_003028"
     CDS             complement(5075..6286)
                     /locus_tag="OQQ26_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgeY family selenium metabolism-linked
                     hydrolase"
                     /protein_id="HCS1858404.1"
                     /translation="MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHR
                     IKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGME
                     TDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYII
                     EQSGIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPIL
                     GELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGAL
                     DEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEG
                     LFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMY
                     AAIPLSWLATE"
     gene            complement(6344..7540)
                     /gene="dpaL"
                     /locus_tag="OQQ26_003029"
     CDS             complement(6344..7540)
                     /gene="dpaL"
                     /locus_tag="OQQ26_003029"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HCS1858405.1"
                     /translation="MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRP
                     TPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSF
                     EHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAE
                     CIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMR
                     EMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV
                     NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRI
                     ISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEG
                     KHAVAP"
     gene            complement(7598..8785)
                     /gene="ygeW"
                     /locus_tag="OQQ26_003030"
     CDS             complement(7598..8785)
                     /gene="ygeW"
                     /locus_tag="OQQ26_003030"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311770.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HCS1858406.1"
                     /translation="MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAAL
                     KALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGE
                     TVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQC
                     DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFG
                     MDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKV
                     MEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADI
                     SGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQE
                     RVK"
     gene            9264..11042
                     /locus_tag="OQQ26_003031"
     CDS             9264..11042
                     /locus_tag="OQQ26_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HCS1858407.1"
                     /translation="MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAG
                     TGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTP
                     VILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEEQGPGDNISK
                     IFATMIDNMDQGVLVVDDENRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTH
                     GHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGEC
                     RVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCTAIPE
                     QLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAR
                     EILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED
                     IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGE
                     VIDSTLLPPNLLNNGTTEQSDVTEVSEAHLALDDAGGTALEEMEKQMIREALSRHNSK
                     KQVADELGIGIATLYRKIKKYELLNT"
     gene            complement(11082..11561)
                     /gene="xdhC"
                     /locus_tag="OQQ26_003032"
     CDS             complement(11082..11561)
                     /gene="xdhC"
                     /locus_tag="OQQ26_003032"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase iron sulfur-binding
                     subunit XdhC"
                     /protein_id="HCS1858408.1"
                     /translation="MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC
                     CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQLAYAKSGAVQ
                     CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK"
     gene            complement(11558..12436)
                     /gene="xdhB"
                     /locus_tag="OQQ26_003033"
     CDS             complement(11558..12436)
                     /gene="xdhB"
                     /locus_tag="OQQ26_003033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase FAD-binding subunit XdhB"
                     /protein_id="HCS1858409.1"
                     /translation="MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHND
                     RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAASSIAG
                     PQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL
                     EHDEILVAFHFPPQPKEHVGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG
                     VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRVSKEFRLHLIQTMT
                     KKVISEAVAAAGGKLQ"
     gene            complement(12447..14744)
                     /gene="xdhA"
                     /locus_tag="OQQ26_003034"
     CDS             complement(12447..14744)
                     /gene="xdhA"
                     /locus_tag="OQQ26_003034"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdenum-binding
                     subunit XdhA"
                     /protein_id="HCS1858410.1"
                     /translation="MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVR
                     SPIAHGYAVSINDEQARSLLGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALL
                     TRHVRHHGDAVAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGN
                     LLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
                     QIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKV
                     SLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGN
                     KVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEI
                     RLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQKGNLRRGVGVA
                     CFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVS
                     DVRVISTQDTDVTPFDPGAFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNL
                     PLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVD
                     LTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGV
                     VRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMA
                     TGVAINTLPLTPKRLYEEFHLAGLI"
     gene            15159..15914
                     /locus_tag="OQQ26_003035"
     CDS             15159..15914
                     /locus_tag="OQQ26_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HCS1858411.1"
                     /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV
                     KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTT
                     KTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA
                     AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGST
                     DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
     gene            15993..16066
                     /locus_tag="OQQ26_003036"
     tRNA            15993..16066
                     /locus_tag="OQQ26_003036"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16025..16027,aa:Gly,seq:ccc)
     gene            16288..16833
                     /locus_tag="OQQ26_003037"
                     /pseudo
     CDS             16288..16833
                     /locus_tag="OQQ26_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001338841.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16865..>17317)
                     /locus_tag="OQQ26_003038"
     CDS             complement(16865..>17317)
                     /locus_tag="OQQ26_003038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCS1858412.1"
                     /translation="LRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALW
                     RRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVE
                     CIHGEHFISREIMRATVFNYIECDYNRWRQHSWCGGLSPEQFENQNLA"
BASE COUNT         4218 a         4190 c         4443 g         4466 t
ORIGIN      
        1 acatcatttt ccattgcccc attcttgatg ataatccggc agcggtaatt atacagtcga
       61 tggctgacat agtggttcca ttatttatag gggctaataa cgcctgataa ttgcgttact
      121 tcctgatgga ttaagttggg ggtaatttat cccagagagg tcataaagac tcgtgaaaag
      181 tatagttgac ccatcggcat tattcattga tttaggtgcg cagaaacgtc ccactgtgat
      241 ttctgttgtt ggtgctgggg ggaaaaccag cttgcttttt tggctggcag aactgctcca
      301 ggctagcggc aggcgtgtgt taatcactac gacgacacat atgtttatgc caacgtctca
      361 ctggcccgtg gttttctgtc gtgatcccgc catgcttcct catgcgtctc ttacatcccc
      421 tatttcattt tgttttcaca gctggaaagc gaaccaggga aaagtgcagg gatttacgcc
      481 agaagcgatt gatgcactgg tgcaacgacc agagtgtgac gtaattctca ttgaagcaga
      541 tggctcgcgt gcaatgccgt taaaagcgcc tgatgagcac gaaccttgca tacctaaaag
      601 cagttgctgc gtgattgctg tgatgggagg acatattttg ggcgcgaaag tgagcacaga
      661 aaatgtccat cgctggtcgc agtttgctga tattaccggg ttaacacctg atgcaacctt
      721 gcaactgagc gatctcgttg cgctggttcg ccaccctcag ggggcgttta aaaacgtacc
      781 gcaaggttgt cggcgagtct ggttcattaa ccgtttttct caatgtgaga atgcgattgc
      841 gcaaagcgag ctccttcaac cgctgcaaca acacgacgta gaggcaatct ggctgggcga
      901 tatacaagaa catcctgcaa tcgcgcgcag atttgtgaat tagcggcccg ggtattccgg
      961 gttactgaaa ggatatccat tgaggttggt atgaatattt tcacagaggc tgcaaaactc
     1021 gaagagcaaa attgtccgtt tgcgatggcg caaattgttg atagccgagg ctcgactccc
     1081 cgccattctg cacaaatgtt agtgcgcgcc gatggctcta tcgtcggtac aattggtggc
     1141 ggaatggttg agcggaaggt gattgaagag tcgcttcagg cattgcagga acgtaagccg
     1201 cgattattcc atggacgtat ggctcgtaac ggtgcggatg ctgtcgggtc agattgtgga
     1261 ggtgcgatgt cagtgtttat cagcgtccat ggtatgcgtc cacgtctggt gttgattggc
     1321 gcggggcatg tcaaccgggc gatagcccag agtgcggcgc tattaggatt tgatattgcc
     1381 gttgccgata tttatcgcga aagcctcaat cctgaactat tccctccatc aaccacgctt
     1441 ctccatgctg agtcgtttgg tgcagcagtg gaagcactgg atattcgccc tgataatttt
     1501 gtcctgattg ccacgaataa tcaggatcgt gaagccctcg acaaactcat tgaacagccc
     1561 attgcatggt tggggttgct ggcaagtcgt cgcaaggttc agcttttcct gcgtcaattg
     1621 cgtgagaaag gcgtggctga agaacatatt gcccgtttac atgcgcccgt tggttacaac
     1681 ataggtgcgg aaacgccgca ggagatcgcc atcagcgtgc tggcagaaat attacaggtg
     1741 aaaaataacg cgccgggtgg gctgatgatg aaaccttctc atccttccgg acaccagctg
     1801 gtggtgattc gcggtgcggg ggatatcgcc agtggtgtgg cgctacgtct gtatcatgcg
     1861 ggttttaaag tgatcatgct ggaagtggaa aaaccgacag tgattcgttg taccgtggcg
     1921 tttgcccagg ccgtgttcga tggcgaaatg acggtcgaag gcgtcactgc ccgcctggca
     1981 accagctctg cggaagcgat gaaacttacc gaacgcggat tcatccctgt gatggtagat
     2041 cccgcctgtt cattgcttga tgaactgaaa ccgctttgcg tggtggacgc tattctggcg
     2101 aaacagaatt tggggacgcg ggcagatatg gcaccagtaa caatcgcgct tgggccgggc
     2161 tttattgcag ggaaggattg tcatgcggta attgaaacaa atcgcgggca ctggctcggt
     2221 caggtgattt actctggttg tgcgcaggag aataccggtg ttcctggcaa tattatgggg
     2281 cataccaccc gacgggtgat ccgtgctcct gctgcaggca ttatgcgatc caacgtgaaa
     2341 ttaggcgatc tggtgaaaga gggcgatgtg attgcctgga ttggtgagca tgaaattaaa
     2401 gcaccgttga cggggatggt gcgtggcttg ttgaacgacg gactggcagt ggtcggtggt
     2461 tttaaaattg gtgatatcga tcctcgtggt gaaacggctg atttcaccag cgtttctgat
     2521 aaagcccggg cgattggcgg cggcgtactt gaggcgttaa tgatgttgat gcatcagggc
     2581 gttaaagcga cgaaagaagt gctggaagtg gcttaagtga aaatggccgg atggtattac
     2641 ccacccggcc tttaaattac tgacaaatca ccgttccggt tttgccttca atcccttctt
     2701 tcgctttgct caatacggta atcagtgctt cacgacctgc gcgagagcga gcaaacgagg
     2761 cggcagcttc cactttaggc agcatagaac ctttcgcaaa atgaccttct tcgataaagc
     2821 gttcagcatc acttaatgac aggcgatcga gccactgttc attctcttta ccgaagttaa
     2881 tggccacttt ttctaccgca gtcagaatga tcagcatatc ggcatcaatc atttctgcta
     2941 aacgggcgct ggcccagtct ttatcgataa ccgcgctggc accacgcaga tggttacctt
     3001 cacgaataac aggaatacca ccaccgccaa cggtgatcac cacctggcct gcatctacca
     3061 gagctttaac cgtttctttt tcaataatat caaccggttt tggcgaggca acaacacggc
     3121 gatagccgcg accagcatct tctttcagag tgtaaccctg ttttgtcagt tgctctgctt
     3181 cttgctcggt aaagaacgaa ccgatcggct tggtcgggtt gaggaatgcc ggatcgttag
     3241 cgtcgacttc gacctgagta accagcgttg ctaccggttt attaatgccc cgagaaagca
     3301 gttcttctct taaggcgttt tgtagatcgt aaccaatata accctggctt aaggcaacgc
     3361 agacagacat cggcagcatt ggcgagtgcg cttcagtttt tgcagcagct tcaaaggcct
     3421 ggttaatcat gcccacctgc ggcccgttac catgagtgac gataacttca tgtccttggg
     3481 caattaaatc aacaattgcc tgagaagtaa tttttaccgc tttcatttgt ccggccaggt
     3541 catcgcccag cgcattcccg cccagggcga gaacaatttt cttactcatt tttcctcact
     3601 catcattctt gattgtgtat agatccctga cagtggttag agcacgggag ggacaaacgg
     3661 tttgcgtcgc aggaaacgac ctcgcccggc tttgcctgta aaggtgccgt cacagaaaat
     3721 cgtttcacca cgggataagg ttctgacaat cgcgccctga caggtaaaac cctcccatgg
     3781 cgagtagtcg gcgttgtcgt ggagatggcg atgctgaatt tgttggctct gacgtgggtc
     3841 gataatcacc acgtcgccat cggaaccggg cgctaataat cctttttgcg gccacaggcc
     3901 aaacagcctg gcgggcattg cgctggttaa ttcaacaaag cgttccggtg ttatacgtcc
     3961 cgtcatcacg ccactggaaa acagtaactg catgcggttt tccacaccgg gtaagccatt
     4021 tgggcagcga ctgaaatcgc ctttagaaat ttgcaggcgt tgagccatcg agaaggtgca
     4081 gtgatcggtt gccaccacgt caatcgcacc atcgctgatg ccacaccaca gtttgtcctg
     4141 ctcgcgtacg ttacgcagcg gtgggctaag aatgaacttc atgccatctt ctgtatcgta
     4201 actgcgttcg tccaacagga gatattgtgg gcaggtttca acccagactg gctggtgatt
     4261 cgcacgggca agacgcagat aatccagacc taagccgtta gacaggtgca cgatatagag
     4321 cggggcgtta ccggcaattt gtgccaggtt aatcatgcgg gcgatggctt ccgcttcgca
     4381 ttccagaggg cgactcaagg catgatagcg cggcgcggtt aaccctgcgg cgataaattc
     4441 cgcccgcttg ctggcgatag ctgcatcatt ttccgggtgc acggtggtca gcgcgccgga
     4501 ttcatgcaag cggcgtaatg cctgcaaaac ctcgtcatcg ttgagtttgt attgataggt
     4561 taaatagagt ttaaaactgc tcagtccttc ctcgaccatc atcgggattt cgtcgaggat
     4621 tgcgtgatta atgtgctgga tcacaccgtg aaagctgtaa tcgatgaccg ctttatgggc
     4681 ggcataacca cgataaacct ccagttgatg gcgtaaccga cagccgtttg ggccaaatcc
     4741 catatggtca ataatggttg ttgtaccgcc acacgcagtt gcgcgggtac cggtaaaaaa
     4801 atcatcacaa ctgcgcgcga tgccgacatc aatattgaaa tgcgtatgga catccacgcc
     4861 gccagggaaa acgtaacagc cagtggcatc aatttcttca tacgggagct gcggcgaaat
     4921 attgttgccc aactggcgaa caatcccgct ttcaatcagc aaatcctgtt tggcttgtcc
     4981 atctgcgtta acgacagtgc cgtttttgat caatacgcgc atagcaaact ccaaaaaccc
     5041 tccggcgaac cggaggggaa taagtgaaga gtaattactc tgttgccagc cagcttaacg
     5101 ggattgcagc gtacatcgcg gcacaggtca ccaggtgaga tttccaggtt ttttcgttag
     5161 gtgcatgcgc ttcaggttct ttacccgggc caaagccgat caccggaatg ccgtgacggc
     5221 ccatgataga tacgccgtta gttgagaagg tccacttatc aacaaccggc gctttgccaa
     5281 acagcccttc gtaggcattc accagtgctt taacggtgaa gtgatcttct tccactttcc
     5341 aggtcgggaa gtagcattcg gttgggtaaa ccaggccagt ccaggacgga cggtcgtagt
     5401 tgtacataga aacaaccgcg ttagctttct gtactgcagg cagggcgcgg atttcgtcca
     5461 gcgcgccttc ccaggtttcg ccccaggtca gacggcggtc aatagagacg gcgcagctat
     5521 ctgctacagc gcaacggctt ggggatgtga agaagatttc agaaacggtg agggtgcctt
     5581 tgccgaggaa ttcgtcataa cccagacgtt gggagagttc ttgtaattcg ccaagaatcg
     5641 gacccatttt gaaaatggcg ttgtcaccgc gttctggcgc agaaccgtgg cagctaacac
     5701 cctgaacatc aatacgaatt tccatacgac cgcgctgacc acggtatatc tggcagtcgg
     5761 ttggttcggt actgaccaca aattccgggc gaatgccgga ttgttcaata atgtactgcc
     5821 agcacagacc gtcgcagtct tcttcctgca cagtaccggt aaccagcagg gtatattcat
     5881 cttccagacc gaggtcttta atgattttac cggcataaac catagatgcc atgccgcctt
     5941 cctggtcgga agtaccgcga ccaccgatta gttcatcagt ttccatgcct tcgtacggat
     6001 cgaagtccca gtttttgatg ttgccaatgc cgacggtatc gatatgagcg tccattgcca
     6061 ccagacgcgg gccgtggccg atataaccga gaacgttgcc catcgggtcg atttcaactt
     6121 tatcgaagcc gactttttcc atctcttctt taatacgatg tactacgcgt ttttcgtcgc
     6181 agctttcact gggaatagca accatgtcgc gcaggaagcg agtcatgtcc gcctggtaat
     6241 cttttgcttt ttcaagaatc agtttgaatg gaatattctt agccattatt tttctccaga
     6301 ttttttactc cccgttttgc agggagtagt tccaataggg tgattaaggt gctacagcgt
     6361 gtttgccttc ccagacaact tcgcggtagt gcttcacgtc ggtgtcgcct tcagtgctga
     6421 taaccagcac tacggcatct ttgttcagcg ccagtttttc catcaggctt tgacgttgcg
     6481 ggtgataatg aaccgctgcg agaacgccca aaccgacagc gccggattca ccggagatga
     6541 tgcgcgggtc gttgccgtac ggattaccca gcacgcgcat acctaatgcg gcaacgctgt
     6601 cctggcagga gatgaattgg gtggcgcagt tacgtaggat ttcccagccc agcgggttag
     6661 gttcgccaca ggccaggccc gccatgatgg tggccatatc accgccaacg ttgacgatgt
     6721 cgcctttgac gccggagcga taaatacagt cagctttgtc aggttcaaca ataatgctgt
     6781 gcagattttg cgggctgtag acgtcgacca gataacccag cacaccaccg gccattgcac
     6841 cgacaccggc ttgcagcaga acgtgcgtcg gggttacgcc catttcacgc atttgctcga
     6901 cggcttcatc tgccagtgtt gcgtagcctt gcatgatcca ggttgggatt ttggtgtaac
     6961 cttcccatgc cgtgtcctgt accacttccc agccgtgctg ctgcgcgtgt tgcatggtca
     7021 ggcgaacggt atcgtcatag ttcatatccg tgacgatgca ctcggcaccg aggttcagaa
     7081 tggcgtcaac gcgttcctga gcagaacctt tcggcatgta aattaccgca ttctgtccga
     7141 gttgctgtgc tgcccacgcc acaccgcgcc cgtggttgcc gtcggtggtg gtcgcgaaag
     7201 tcattttttc gccgatggca tttttcaggt gctcaaatga cagcgtttcg atatcaagat
     7261 gatatttttc acacaataat tgagcgatgg cgtacgcacc gccgagcatt ttgaaggcgt
     7321 tcagaccgaa tcgttttgat tcgtctttga cgagaatttt cttcacacca aaaaggtttg
     7381 cgagatcgtc cagcgcacaa agcggtgttg ggcgataacc agctattttc tggtggaact
     7441 ggcgcgccag tttggcctgg ctttgcgaaa agagcggtga tgtttcgccg ttgaaaaatt
     7501 tgttatcggc gatatcaatc ttcaatgaga aaacggacat atcctatcct tttggcctct
     7561 ggaaatagag ggccgaccag ctgatcggcc cgaggggtta tttcacgcgt tcttgcgctt
     7621 ctttcagcag ttgctcgagc agtgcacctg gtttggcgta tttacgggac aggatcatcg
     7681 cggcgatgat ataaggcttc cagctggctt ctttgtaggt agcgatacgg tatttttcga
     7741 atacgccttc agtcacttca ccttctttgc aggatacgcc gctgatatca gctggcaggc
     7801 agtgcatgta cagggcttcg ccatcacggg tcagttccat catctcttca gtacaatgcc
     7861 agtctttgtg ttgcgcgttc tgtgccagac actgtttttc cagtgctttt aagccttcgt
     7921 ggtcgttcgc acgcagcaat tcagtacgct cttccatcac tttgtaaggt gcccatgact
     7981 tcggataaac gatgtctgcg tctttgaagg cttcttccat gctggtgacc tgacggaagc
     8041 taccaccgga ggctttagca ttgtttttcg ccacttcaac cacatccggg atcaggtcgt
     8101 agccttccgg atgggccagg gtgacatcca taccgaagcg agtcatcaga ccgatgatgc
     8161 cttgtggtac agagagcggt ttgccatagc ttggagagta ggcccaggtc atggcgattt
     8221 ttttaccttt caggttttcc agtgaaccaa agtgttcacg taaccatgcc aggtcagcca
     8281 ttgactgagt cgggtggtca atatcgcatt gcaggttcac taaagccgga cgctgtggca
     8341 gtacaccctg cttgtaaccg tcatcaagtg cagcgccaac ttcacgcata taggcgttgc
     8401 ctgcgcccag atacatatcg tcgcgaatac caatagcgtc ggcgcagaag gagatcatat
     8461 tggcggtttc acgcacggtt tcgccgtgag cgatttgtga tttgccttca tcgagatctt
     8521 gctgtgcaag gccgagcagg ttaagcgcgg aagcataaga gaagcgggta cgagtggagt
     8581 tgtcgcggaa tacggaaata cctaatccac tattaaagac tttggttgag atgttttcag
     8641 cacgcagtgc ttttaatgct gcggcaacgt ccagtacttg tttcagttca tctggcgtct
     8701 gttcccacgt taacaaaaaa tctttctcgt gaaggtgaga ggtcagtgaa ttgatatcct
     8761 taatcagctc attaacagtt ttcatcataa agtcccggta gtggaatgac aggcaaagtg
     8821 gtttatttca ctgtgacttg ccaaagtgat tggtgttttc acagctatac ttgggactaa
     8881 caataagtgt gccagaatta tccacggggc tgcaaaagac taatttgacg gataatgtgt
     8941 ggggttgatc ataaattgat gccagcttcc ggttgtttgt aaaatacgaa aacgtgtggc
     9001 tttttttatt gcgttattta tttgctgcta agtatcagaa ataagataaa ggggcaggct
     9061 atccctcgtc agtttgataa actcaccgcc gtaattctca tattgatata gaaatgtgat
     9121 atctcttcca taatttcatt agaaagtgat aaaaatctta tgtttttatc aaagccaatt
     9181 tcgcctgagt taatatcatc atgatctgtg aaccatcaac gtcttcaatg atcgactttt
     9241 aagtaagtct ggaaggtaaa gctatggagc ttgctactac gcagtcagta ttgatgcaaa
     9301 ttcaaccgac aattcagcgt tttgccagaa tgcttgccag cgttttgcag cttgaggttg
     9361 agatcgttga tgaaaacttg tgtcgcgtcg ccggaactgg cgcgtatggg aagtttcttg
     9421 gtcgccagtt gagcggcaac tcacgcctgc tccgccacgt cctggaaacg aaaactgaaa
     9481 aagttgtgac acagtctcgc ttcgatcccc tttgcgaagg ttgcgatagt aaagaaaatt
     9541 gccgcgaaaa agcatttctg ggtacgcctg tcattttaca ggatcgttgt gttggggtga
     9601 taagtttgat tgccgttacc cacgagcaac aagagcatat cagtgataat ttacgcgaat
     9661 tttctgatta tgttcgccat atatccacca tttttgtttc gaaacttctg gaggaacagg
     9721 ggccaggaga taacatcagt aaaatatttg cgaccatgat cgataatatg gatcagggcg
     9781 tattagttgt tgatgatgaa aatcgggttc agtttgttaa tcagactgcc ttaaaaacac
     9841 ttggtgttgt gcaaaataat attattggga aacctatccg tttcagacca ttaacatttg
     9901 agagtaattt tacccatgga catatgcagc atattgtttc atgggacgat aaaagtgaat
     9961 taatcattgg tcaattgcat aacattcagg gccgacaatt atttttaatg gcgtttcacc
    10021 aatcgcatac cagtttttct gtagcaaatg cacctgatga accgcatatt gaacaattgg
    10081 ttggcgagtg ccgtgttatg cggcaattaa aacgactcat tagccgtatt gcacccagcc
    10141 catccagcgt tatggtggtt ggtgaaagcg gcacgggtaa agaagtcgtc gcccgagcaa
    10201 tccataagtt gagcggaaga cggaataaac cctttattgc tatcaactgt accgcgattc
    10261 cggagcagct tctggagagc gaactgttcg gttatgttaa aggtgcattt actggcgctt
    10321 ctgccaacgg taaaacaggg ttgattcagg cggcgaatac gggcacgctg tttctcgatg
    10381 aaataggtga tatgccatta atgttgcagg ctaaattact gcgcgctatt gaggcacgtg
    10441 aaattctgcc gattggtgcc agtagcccaa tacaagtcga cattcgcatc atttctgcaa
    10501 ctaaccagaa tttggcccag ttcattgccg aaggtaaatt ccgcgaagat ctcttctacc
    10561 gacttaatgt tatcccgata actctgccac cgctgcgtga acgtcaggaa gatattgaat
    10621 tactggtgca ttacttttta catctgcata cacgtcgtct gggatcggtt tatcctggca
    10681 ttgctcccga tgtcgtcgaa atattgcgta agcatcgttg gccaggaaac ctgcgcgagt
    10741 taagcaattt gatggaatat ctggttaacg ttgttccttc aggtgaagtt atcgacagca
    10801 cgctattgcc gccaaatctg ctgaataatg gcacaacgga gcaaagtgat gtaacagagg
    10861 tcagcgaggc gcacctggca ctcgatgatg cgggcggcac ggcgctggag gagatggaaa
    10921 agcaaatgat ccgcgaggcg ctttcacgtc ataacagcaa gaagcaagtt gctgatgaac
    10981 tgggcatcgg cattgctacg ctctatcgca agattaagaa atatgagttg ttaaacacat
    11041 aacctcagtg aatccggcct gaattcaggc cggatatcct tttacttcgt tttctcgcaa
    11101 tccagaaccg tatttacaat catctgatac cccgtgcagc gacaaagatt tcccgccagt
    11161 ccgcgacgaa tttccgtaat ggttaatggc ttctcgcgtg gtttcgccag cattgctgtg
    11221 gtagccataa tcagaccagg agtacaaaac ccgcactgca ctgcgccgga tttcgcataa
    11281 gccagttgaa catgagaaag ttttccgcct ttcgcttcac cttccagcgt gcggatctct
    11341 tttccttcag cccaggcggc aaggtataag caactgtcta ttgctgtgcc gtcgaccagc
    11401 accgtacagg caccacattc acccacgcag cacccttgtt tgacacttag cagtccttgt
    11461 tcgcggagta attccgagag cggcgtgcct ggtgcggcgt gaagctgaaa aggcatcccg
    11521 ttaatggtgc attcgatggt aattgtttcg ctgtgattca ttgcaatttt ccccccgccg
    11581 cggcgacggc ttcgctaatc acttttttgg tcatcgtctg gatgagatgc agacgaaact
    11641 ctttactgac ccgccatgaa gaacgcgggg cgacatcttg caggacagat tcgctgatag
    11701 cttccagcgt ttgcaggttt aatggtgcat tttgtgcagt ctgttcggca tgttggcagc
    11761 gaatcggcgt tggcgcggca acaccaaatg ccaggcgtaa ttcgctgaaa ttgccgttat
    11821 ccagtcggca atgtgcggcg cagccaatcg ttgaaatatc cattgcgtcg cgcatggcat
    11881 atttaaaatg cgcgctgccc acgtgttctt tcggctgggg cggaaaatga aaggcgacaa
    11941 ggatttcgtc atgctcaaga gacactttgc ccggcccggt gtgaaagcca ttaatcggga
    12001 cgaaacgaac accgcgcggg gagtggatct ccagtttcgc gtcataaatt agcgttggcg
    12061 tggcagaatc tgcgctggtg gcaccgttgc aaatatttcc accgtaggta gcgacgttac
    12121 ggatctgcgg tccagcaatg gacgaggccg cagcacataa cgccgggaga tgacgttgag
    12181 ttataggatc ttctattagc tgggtaaatg tcgttgcaga gccgatacgt agcgagccat
    12241 cttccgccag cgtaattccc cgcagctccg ccagattatg aatatcaaca atatggcgat
    12301 aacggtcatt gtgatggtgg agctgaatca gtacgtcagt gccaccggcg agcagtttgg
    12361 cctgcgggtt gtcagccagc aggttgatgg catcggcaag agttgctgcg cgatggtaag
    12421 aagcaaaatc aaacatgatg ttatcctcaa atcaatcctg ccagatggaa ctcttcatat
    12481 aaccgttttg gcgtcagcgg cagtgtattg attgcaacac cggtagccat cttcaccgcg
    12541 ttacgaatag cagcggcaac aggaattatg ggtggctcac ccagtgactt atgtccgtat
    12601 gcggattgcg gctcattgat ttcgacgaac gcgctttcca gttgtggcag atccggcatg
    12661 gtcggcattt tgtaatccag cagattgggg ttacggacca cgccgctttt agcatcgatg
    12721 atcatctctt caaatagcgc ccagccaatg cccattccca ttccgccgtg tacctgacct
    12781 tctgccagca gtggattaag aatatgccct gaatcatgaa cgttgaggat gcggttgatg
    12841 gtgactttgc acagcgcaat atcgaccgtc agatcaacaa aggtacagcc aaacgccggt
    12901 gggttagtgg tggttttgat ggagctttca gcagagagct gcccgccgcg ttcagggtgg
    12961 tagaaagcgt ccatcgccaa atcttttaac gacattaacg gctcttccgg tcgttcaacc
    13021 agcacgatat ggccttttat caggggcaaa ttcatcgctg actgatgtag catgactgcg
    13081 gcgtgagcga tgattttctc ttttaataat agtgccgcac tgcgcagcgc aggcgcggca
    13141 acatagctct ggcgtgaggc aaatgcgccg ggatcgaacg gcgtaacgtc ggtatcttgt
    13201 gttgaaataa cgcgaacgtc gctgaccgga acccccacgg tttctgccac catttgcgag
    13261 aagacggtgt cggcaccctg accgatttcc gtcgcgccgc tttgcacgtt gatggttcca
    13321 tcctgattca tcagaaggcg cgcgcctgct atttctacgc cgacaggcca ggtgttagag
    13381 gtgtagctaa aacaggcgac gccaacgccg cggcgcaaat tgcctttctg gttctggcac
    13441 tctgcacggc gtttttccca ttcaaagatt ttccggcctt tttcaagaca ctccggcaac
    13501 cctgcgctgt aaatacgttt gcccgtgagc ggattagcat ctccttcgcg ggcggcgttg
    13561 cgtaaacgaa tttcaacagg atcaatacct aacgctgtcg cggcatcatc aagcatagac
    13621 tcaacggcaa atacgacttg tggcgcgcca taaccacgca tcgcaccagc cgaggggagg
    13681 ttggtatagc aggtctttga actgtaagcg taggcacaac gaggataaag gtaagcgact
    13741 ttattccccc ccgcagaagc gatggagtgc ccgtgagatg cataagcgcc ggtgttagac
    13801 agaacatcca gactataacc tttcaatgtt ccgtcgcggt tcacgcccat ttgcccgtca
    13861 atggtaaaag cgtggcgggt acgggttgcg aggaaacact cttcacggct aagggaaact
    13921 ttcaccggaa tgccgccaag cttgctggtc aggaatgccg ccattggctc ttccagtaca
    13981 tcctgtttat taccaaaacc gccaccgaca aatggtttga tgactcgtac gcatgaccag
    14041 ggaatatcca gcgcctgacc aaccacgcgg cgaacaatgt gcgggatctg ggtgctggaa
    14101 acgatggtaa ttcgcgagtc atcctccatc cacgccagcg atgttacgct ttccatgtga
    14161 caatgttgaa taacgggggt ctgatagtgc ccctgtacct ggtagtcggc ggcatcgatt
    14221 gtttgttgga cattacccgt agacatcgtg ctttgtttca gtaaattgcc accgttatgg
    14281 attggtgcag cgtcttctgc cagcgccgct tctggcgtgg tgataacggg taattcttgc
    14341 cactcaatgc tgaccaattg cgccgctttt tctgccgtga gttcatcgcg ggccacgacg
    14401 atggcaacgg cgtcaccatg atgacgaaca tggcgagtta gcagtgcgcg atcggcggta
    14461 tcgcgcttgt tttcgtcaag tgtccatgca tgcccagctg tagcgaatgg gatatcaggc
    14521 acatcttccc aggtaaaaat cgccagtacg cctagtaaac ttctggcttg ttcatcatta
    14581 atacttacgg cataaccatg tgcgataggg ctacgtacat atttcgcata acacatgccc
    14641 gccataacat aatcgtcagt atatcgtgcc cgcccggtga ccttagcaat ggcatcgacg
    14701 cgcatgcatg attcacccgt agcggttgct tcccgcgctt ccatagaaat cccctcgatt
    14761 tgaacatttg gttcttatgg caaagattta gtctaagcag gcaagattta cgccagaaac
    14821 gacgataagc gttaggggag gaaggaagtg tgatgacgtt aaaaaaacac agatatgata
    14881 cgaaacagga ctctgaatag agacagtgat acgtatcaat atgagtggcg ataaaatcaa
    14941 tgtgataaat tgggattatt acgcatcagg atgggaaata gggtaaaaag tcaggaactt
    15001 cgatacttct acagcgaata ttttgctgat gatacttccc tttgccaaat gaaattaacc
    15061 tctttatcta ttaccacgtt tttccagaag caagagattg ggtatcaaga ggctggctgc
    15121 tatgataagg cgtcttgttt tttaagcgag gaaagatttt gagtgcggga cgcctgaata
    15181 aaaaatctct gggtatcgtg atgttgttat cggttggact gcttttggcg ggctgttcgg
    15241 gtagcaaatc atccgataca ggaacgtatt ccggctccgt ttacaccgtg aaacgggggg
    15301 atacgctata tcgtatttcg cgcaccacgg gaaccagcgt aaaagaactg gcgcgactga
    15361 acggcatttc ccccccttac accattgaag ttggtcagaa actaaaactg ggtggggcga
    15421 aaagtagcag tagtacacgt aaatcaaccg ccaaatcaac gaccaaaacc gcatcggtta
    15481 caccgtcatc agcagtaccg aaatcttcct ggccgccagt agggcaacgt tgttggttat
    15541 ggccaacgac agggaaagtt atcatgccgt attcgacagc agatggcggc aataaaggga
    15601 ttgatatatc agctccacgg ggtacaccta tttacgccgc gggtgccgga aaggtggtgt
    15661 atgtgggcaa ccagctgcgt ggctacggta atctcatcat gattaaacac agtgaagatt
    15721 acattacggc ttacgcccat aatgacacga tgctggtaaa taatgggcaa agcgtgaagg
    15781 ctgggcaaaa aatcgccacc atggggagca ctgatgcggc atctgttcgc ctgcatttcc
    15841 agattcgtta ccgtgcaacg gcaattgatc cgctgcgtta cttgccgcct cagggcagca
    15901 agccaaaatg ctgatggcga attaatcagc agtcagcagc gtggcacttg ctaaggagag
    15961 cgtaaggttt ataatgcctt acgcatctcg aagcgggcgt agttcaatgg tagaaggaga
    16021 gcttcccaag ctctatacga gggttcgatt cccttcgccc gctccaattt atcttcacct
    16081 gatcaatctg ccatttttgc tgtatctgat tttctatatt atcttaattc aatcgcttca
    16141 ggcttttcgc aatcgctgta acacttcccc atttttttgt aaataaaaag cgtttacgca
    16201 atgcaatcct tttgtaacaa cccaggtaaa ataccttatt ttcaagttgt tgaataagtg
    16261 gttatctacg cttttaacaa acgattgatg gattatttta tgaaagggaa atctgcatta
    16321 actcttctgc tcgctggtat attttcgtgc ggcacatgcc aggcgacaga ggcagaagtg
    16381 acaagcgaat ctgtatttaa cattcttaat tccagggggg cagcaacaga taaaagttat
    16441 ttatcgttaa atccagataa gtatcctaat tatcgtcttc tgattcactc agccaaatta
    16501 aaaaatgaaa taaagagtca ctataccaaa gacgaaattc aaggattgct aacattaaca
    16561 gaaaacacac gaaagttaac gttgacggag aaaccctggg gaacgtttat tcttgcttct
    16621 actttcgaag atgacaaaac agcggcagaa acccactatg atgctgtctg gctgagggat
    16681 agtttatggg gctatatggc attagtatca gaccagggaa atagtgtagc cgcaaaaaag
    16741 gttctgctca ccctgtggga ttatatgtct acgcccgacc agattaagcg gatgcaggac
    16801 atcattagca acccaaaacg actggatgga attctgatcc tacccacgta atatggacac
    16861 aggcctaagc gaggttctgg ttttcaaatt gttccggact gaggccgcca caccaactgt
    16921 gctgccgcca ccgattgtaa tcacattcga tataattaaa caccgttgcc cgcattattt
    16981 cccggctgat aaagtgttct ccatggatac attccacttt cagcgaatga aagaagcttt
    17041 ccacgcaggc attatcgtag cagcaacctt ttgcgctcat acttccacgc agattatgcc
    17101 gcttcagttg cgcctgataa tctgctgaac agtactggcc tccacggtcc gtgtgaacga
    17161 taacgttccg gggcctctta cgccgccaca gcgccatctg cagggcatcg caggccagtt
    17221 gcgccgtcat gcgtggcgac attgaccagc caataacggc acgtgaccac aggtcaatga
    17281 ccactgccag atacagccag ccttcatctg tacgtaa
//
LOCUS       DAJVTL010000097        17027 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.098, whole genome shotgun sequence.
ACCESSION   DAJVTL010000097 DAJVTL010000000
VERSION     DAJVTL010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17027
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.098"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            348..767
                     /locus_tag="OQQ26_003039"
     CDS             348..767
                     /locus_tag="OQQ26_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HCS1858413.1"
                     /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
                     IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
                     PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
     gene            767..2035
                     /gene="umuC"
                     /locus_tag="OQQ26_003040"
     CDS             767..2035
                     /gene="umuC"
                     /locus_tag="OQQ26_003040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase V catalytic protein"
                     /protein_id="HCS1858414.1"
                     /translation="MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEA
                     KALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE
                     AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT
                     GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF
                     NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYTSMRQAICSYAARAAE
                     KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW
                     QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMAVMDTLNAKEGRGTLYFA
                     GQGIQQQWQMKRAMLSPRYTTRSSDLLRVK"
     gene            complement(2081..2611)
                     /gene="dsbB"
                     /locus_tag="OQQ26_003041"
     CDS             complement(2081..2611)
                     /gene="dsbB"
                     /locus_tag="OQQ26_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HCS1858415.1"
                     /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
                     IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
                     TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV
                     VISQPFKAKKRDLFGR"
     gene            complement(2757..4298)
                     /gene="nhaB"
                     /locus_tag="OQQ26_003042"
     CDS             complement(2757..4298)
                     /gene="nhaB"
                     /locus_tag="OQQ26_003042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HCS1858416.1"
                     /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
                     REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
                     YIFNGLLSSISDNVFVGTIYINEAKAAMESGTITLKQYELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
                     WIATL"
     gene            4520..5239
                     /gene="fadR"
                     /locus_tag="OQQ26_003043"
     CDS             4520..5239
                     /gene="fadR"
                     /locus_tag="OQQ26_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HCS1858417.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            complement(5291..6823)
                     /locus_tag="OQQ26_003044"
     CDS             complement(5291..6823)
                     /locus_tag="OQQ26_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HCS1858418.1"
                     /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
                     EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR
                     GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMG
                     NL"
     gene            7165..8463
                     /gene="dadA"
                     /locus_tag="OQQ26_003045"
     CDS             7165..8463
                     /gene="dadA"
                     /locus_tag="OQQ26_003045"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HCS1858419.1"
                     /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
                     ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA
                     GVPYQLLESSRLADVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVTF
                     RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTVMLKGIVDIPVYPLKGYS
                     LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
                     VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
                     LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
     gene            8473..9543
                     /gene="dadX"
                     /locus_tag="OQQ26_003046"
     CDS             8473..9543
                     /gene="dadX"
                     /locus_tag="OQQ26_003046"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309712.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
                     /protein_id="HCS1858420.1"
                     /translation="MTRPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIE
                     RIWSALGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHS
                     NWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHF
                     AEAEHPDGISSAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPS
                     GQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGY
                     PRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAA
                     AAGTVGYELMCALALRVPVVTV"
     gene            complement(9928..11664)
                     /locus_tag="OQQ26_003047"
     CDS             complement(9928..11664)
                     /locus_tag="OQQ26_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HCS1858421.1"
                     /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIAL
                     PAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV
                     VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN
                     QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA
                     DVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLK
                     IGVRVAEEEAES"
     gene            complement(11759..12673)
                     /gene="ldcA"
                     /locus_tag="OQQ26_003048"
     CDS             complement(11759..12673)
                     /gene="ldcA"
                     /locus_tag="OQQ26_003048"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309715.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HCS1858422.1"
                     /translation="MSLFHLIAPSGYSIKQHAALRGIQRLTDAGHQVNNVEVIARRCE
                     RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQYDPLLI
                     CGHSDFTAIQCGLLAQGNVITFSGPMLVANFAADELNTFTEHHFWLALRNETFTIEWL
                     GEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH
                     AGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVT
                     LPLGAHAILNNTREGTQLTISGHPVLKM"
     gene            12773..13384
                     /gene="emtA"
                     /locus_tag="OQQ26_003049"
     CDS             12773..13384
                     /gene="emtA"
                     /locus_tag="OQQ26_003049"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309714.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HCS1858423.1"
                     /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ
                     KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP
                     TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
                     RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM"
     gene            complement(13386..14120)
                     /locus_tag="OQQ26_003050"
     CDS             complement(13386..14120)
                     /locus_tag="OQQ26_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HCS1858424.1"
                     /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
                     AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
                     VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
                     AELQEGMRFAQIEVNMGQWGVFHFDAQLISISEHKVIDGKNEAITTPRLSFRFLNVSP
                     TVERQLQRIIFSLEREAREKADKVRD"
     gene            14321..14575
                     /locus_tag="OQQ26_003051"
     CDS             14321..14575
                     /locus_tag="OQQ26_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HCS1858425.1"
                     /translation="MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGG
                     WLATMFGIGGSISGFNLHSFLVAVVGAILVLGVFRLLRRE"
     gene            14754..15194
                     /locus_tag="OQQ26_003052"
     CDS             14754..15194
                     /locus_tag="OQQ26_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858426.1"
                     /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN
                     TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPENKKTLMSEHRNNIQVAIDALY
                     RQRRRKSPGDDSETLTHRNDAIFGNHVWQTFAQYFPPGLEKPSV"
     gene            complement(15273..16970)
                     /gene="treA"
                     /locus_tag="OQQ26_003053"
     CDS             complement(15273..16970)
                     /gene="treA"
                     /locus_tag="OQQ26_003053"
                     /EC_number="3.2.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
                     /protein_id="HCS1858427.1"
                     /translation="MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILL
                     GPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPK
                     EGEKYVPPEGQSLREHIDGLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWD
                     SYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELL
                     AQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTP
                     RPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVP
                     VDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDL
                     KSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAP
                     NGWAPLQWIATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGG
                     GGEYPLQDGFGWTNGMTLKMLDLICPKEQPCDNVPATRPTAKSTTTQPSTKEAQPTP"
BASE COUNT         4269 a         4209 c         4430 g         4119 t
ORIGIN      
        1 aattgtaatg aaactcctgt tttacaacta ttaataaatt ttacttcatc taattcatag
       61 ttagccgggc gggatgcgtc aatgtcttta tttctattaa tatgataaat atcaaacaat
      121 gtttaatgtc attatggcga atgcttctat tctatttttt agccgggtaa tatttttcat
      181 ttctgctgga tgagcgtagt cgccagaagg ccgcgtgagc acaggataag agaacgaaaa
      241 atcagcagtc tatgcagcga caaatattga tagcctgaat cagtattgat ctgctggtaa
      301 gaacagactg ctgtatataa aaacagtata acttcaggca gattattatg ttgtttatca
      361 agcctgcgga tctccgcgaa attgtgactt ttccgctatt tagcgatctt gttcagtgtg
      421 gctttccttc accggccgca gattacgttg aacagcgtat cgatctgaat caactgttga
      481 tccagcatcc cagcgcgact tacttcgtca aagcaagtgg tgattctatg attgatggtg
      541 ggattagtga cggtgattta ctgattgtcg atagcgctat taccgccagc catggtgata
      601 ttgtcatcgc tgctgttgac ggcgagttta cggtgaaaaa attgcaacta cgcccgacgg
      661 tacagcttat tcccatgaac agcgcgtact cgcccattac catcagtagt gaagatacgc
      721 tggatgtctt tggtgtggtg atccacgtcg ttaaggcgat gcgctgatgt ttgctctctg
      781 tgatgtaaac gcgttttatg ccagctgtga gacggtgttt cgccctgatt tatggggtaa
      841 accggtggtt gtgctatcga ataatgacgg ttgcgttatc gcccgaaacg ctgaggcaaa
      901 ggcgctgggt gttaaaatgg gcgatccctg gttcaaacaa aaagatctgt ttcgtcgctg
      961 tggtgtggtt tgctttagca gcaattatga gctttacgca gacatgagca atcgggtgat
     1021 gtcgacgctg gaagaactat cgccccgcgt cgagatttac agtattgatg aggcattctg
     1081 cgatctgaca ggtgtgcgta attgtcgcga tctgactgat tttggcagag aaattcgcgc
     1141 aacggtgcta caacgtaccc atcttactgt tggtgtgggg atcgcccaga ccaaaacgct
     1201 ggctaagctt gccaatcatg cggcaaaaaa atggcagcgg cagacgggtg gggtggtgga
     1261 tttatcaaat ctggaacgcc agcgtaaatt aatgtctgct ctccccgtgg atgacgtctg
     1321 ggggattgga cggcggatca gcaaaaaact ggacgcgatg gggatcaaaa ccgttctcga
     1381 tttggcggat acagatatcc ggtttatccg taaacatttt aatgtcgtgc tcgaaagaac
     1441 ggtgcgtgaa ctgcgcggcg aaccctgttt gcaactggaa gagtttgcac cgacgaagca
     1501 ggaaattatc tgttcccgct cgtttggtga acgcatcacg gattatacgt cgatgcggca
     1561 ggccatttgt agttacgctg cccgggcggc ggaaaaactt cgcagtgagc atcaatattg
     1621 tcggtttatc tccacattta ttaagacgtc accatttgcg ctcaatgaac cttattacgg
     1681 caatagcgcg tcggtaaaac tgctgacgcc cactcaggac agcagggata tcattaacgc
     1741 tgctacgcga tctctggatg ccatctggca agcgggccat cgctaccaaa aagcgggcgt
     1801 gatgctgggg gatttcttca gtcagggagt cgcgcagctc aatttattcg atgacaacgc
     1861 accgcgcccc gggagtgagc aattgatggc ggtaatggat actctgaatg ctaaagaggg
     1921 cagaggaaca ctctattttg ccgggcaggg gatccaacaa caatggcaga tgaagcgagc
     1981 tatgctttca ccacgttata caacgcgaag ttctgattta ctgcgggtca aataaatata
     2041 gcggcaggaa aaaagcgctc ccgcaggagc gccgaatgga ttagcgaccg aacagatcac
     2101 gttttttcgc tttaaacggc tgggaaatca ccaccagcac cgcgacaatc aggtaagcga
     2161 taaaaatacc gagcagccac tgcggcattt ccagacctaa aaaatcccac tgacgctcgg
     2221 cgcaatcgcc agaggcgaca aacacttgcg gcacccattt atccagcggc agccattccg
     2281 ggaaacgaac cataaaatca caggttgcaa acggcgaagg atagagctga agcatggtgt
     2341 gctcgtaagt taactgcaca ccgcggaacg cactatacaa ccagataacc atcgctacat
     2401 aacgcagcgg agttttcggg gcgatcgcgc caatcagcgc agcacccaga acgccgaata
     2461 acgcgcagcg ttcataaata cagagcacgc aaggtttcag taacatcaca tgctggaacc
     2521 acagcgccgt cagttccagt gccagagcag taaacgccat caacagccac gcgccccggc
     2581 cttgtgaaca ttggttcaaa aatcgcaaca taatcatttc cctgcaatat gcatagagtg
     2641 cgcagtttaa accaattcat tcgctgcgcc accaggaggc agcaaaaata ggacgcaatt
     2701 ggacaattat cgggcgaaaa ggcaaaccgg gcatttatat gcccggtaag ttgttatcaa
     2761 agcgttgcta tccagcccat ttgcataaac cattcggtta caggggcaag cgtaaactcg
     2821 acgcagagca gtccgacgag tgtcagtacg agggtgtaag gcagggccat ccacaccatg
     2881 cggccataag agaggcgaat caatggcgcg agtgcagagg tcagcaggaa caggaacgca
     2941 gcctgaccgt tcggcgtagc gacggagggc agattggtac cggtattaat ggcgaccgcc
     3001 agcagctcgt attgcttcaa cgtgatagtg ccactttcca ttgccgcttt cgcttcgttg
     3061 atataaatcg tccccacgaa gacgttatcc gaaatggatg acagcagacc gttgaaaata
     3121 tagaacagcg acagctgagc atgttccgat gcctgcaaca caaactgaat aatcggcgaa
     3181 aacagttgtt ggtcgataat caccgcgact accgagaaaa acaccgtcaa cagtgcggtg
     3241 aatggcagag attcggtgaa ggctttaccg atagcatgtt catcggtgac accggtcaat
     3301 gatgtcgcca gaataatgac tgacaaacca atcaagccaa cttccgccag atgcaacgcc
     3361 agcgcagtca ccagccagac gccaataatc gcctggacaa tcagacggat tttatcctga
     3421 cgggtacgct ggtggcggct ttgatcgtca aactgttgca acacttcgcg gactttctcc
     3481 ggcagcgttt caccgtagcc aaaccaacgc agcttctcta ccagcaggca ggttaacagg
     3541 ccacaaatca gaaccggaac ggtcaccggc gacatgcgca ggaagaaatc gccaaaatgc
     3601 cagccagccg ctttagcgat gatcaggttc tgtggttcgc ccaccatggt cattacgccg
     3661 cctaatgcgg tgccgacacc ggcatgcatc atcaggctac gcagaaagcc acggaactgt
     3721 tccagaacca ctttgtaatg cttgtcgata tgactatcgt cttgcaggtc ggtatcttca
     3781 gtacgggaag aggctacgcg gtgataaata ccataaaaac cgactgcaac gctgatcacc
     3841 accgccacga cggttaaggc atcgaggaac gcggagagga acgccgccgc cacgcaaaaa
     3901 gagagcgaca gcagcatttt ggagcgaatg cttaacagca aacgggtaaa tatgaacagc
     3961 aatagctgct tcataaaata gatacccgcc accataaaca tcagtaacag caagacttca
     4021 agatttgccg ccacctcttc acggacgtgt tccgcgctgg tcatgccgat gaataccgct
     4081 tcgatagcca acagaccacc ggggagtagc gggtagcatt tcagggccat cgccagagtg
     4141 aaaataaatt ccgctaccag caaccagcca gcgacgaaag ggctgatgag gaaaattaac
     4201 ggatttacga ttaagaaaat gatgagggcg agtttgtacc agtcggggga ctggcccaaa
     4261 aaattgcgcc atagcgcgcg gccccaggag atctccatga tggtttccct taccttacaa
     4321 ataatcaatg atgtttttat gtttaaacgc aaagcttaac ggtcaggcag gagtgaggca
     4381 agtcttgata gtcaagggga atgagatgcg gaaaatgaag ccttgatccc ttttttcttc
     4441 tttttgtctg ctatcagcgt agttagccct ctggtatgat gagtccaact ttgttttgct
     4501 gtgttatgga aatctcacta tggtcattaa ggcgcaaagc ccggcgggtt tcgcggaaga
     4561 gtacattatt gaaagtatct ggaataaccg cttccctccc gggactattt tgcccgcaga
     4621 acgtgaactt tcagaattaa ttggcgtaac gcgtactacg ttacgtgaag tgttacagcg
     4681 tctggcacga gatggctggt tgaccattca acatggcaag ccgacgaagg tgaataattt
     4741 ctgggaaacc tctggtttaa atatccttga aacactggcg cgactggatc acgaaagtgt
     4801 gccgcagctt attgataatt tgctgtcggt gcgtaccaat atttccacta tttttattcg
     4861 caccgcgttt cgtcagcatc ccgataaagc gcaggaagtg ctggctaccg ctaatgaagt
     4921 ggccgatcac gccgatgcct ttgccgagct ggattacaac atattccgcg gcctggcgtt
     4981 tgcttccggc aacccgattt acggtctgat tcttaacggg atgaaagggc tgtatacgcg
     5041 cattggtcgt cactatttcg ccaatccgga agcgcgcagt ctggcgctgg gcttctacca
     5101 caaactgtcg gcgttgtgca gtgaaggcgc gcacgatcag gtgtacgaaa cagtgcgtcg
     5161 ctatgggcat gagagtggcg agatttggca ccggatgcag aaaaatctgc cgggtgattt
     5221 agccattcag gggcgataat cccttccgtt taaaaagcaa acccctcaaa cgaggggttt
     5281 tttgttgttt ttacagattt cccattcttg gcgggcaacg ttccagcaac tcgacgctgc
     5341 catcttcgtt ttgctgttcg agcatcacat caaatcccca caggcgatgc acatgcttca
     5401 gcacttcttt gcgcccccga tccagcggtg cgcgattatg tggaatgtaa cgcagcgtca
     5461 gcgaacggtc gccgcgcaaa tccacgttcc agatctgaat attcggctcc agattactta
     5521 agttatattg cgacgataac cggttacgga tctcccgata accttcttca ttatgaatag
     5581 cggaaatctc cagataatta tgccgatcgt catccagcac ggtgaagaag cggaaatcac
     5641 gcatcacttt cggtgacagg aactggctga taaaactctc atctttgaaa tcacgcatcg
     5701 cgaaatgcag cgtttccagc cagtcggaac cggcgatatc cgggaaccag tatttgtctt
     5761 cttccgttgg cgactgacaa attcgtttaa tatcctggaa catggcgaac ccgagggcat
     5821 acgggttgat gccgctgtac cacgggctgt tatagggcgg ctggaagacc acattggtgt
     5881 ggctgtgcaa aaactccagc ataaaacgtt ccgttacttt cccttcatca tacagatggt
     5941 taaggatggt gtagtgccag aaggtcgccc agccttcgtt catcacctga gtctgttttt
     6001 gcggataaaa atactggctc accttacgca caatacgcag gatttcacgc tgccatgatt
     6061 ccagcagtgg cgcatttttc tccataaaat agagcaggtt ttcttgtggt tcggacggat
     6121 agcggcgcgc ttcagcaacc gttttctctt cctcgcgctt cggcagagta cgccagagca
     6181 tattgacctg actttgcaga tactcttcgc gacttttctg tcgggctttc tcttcttgca
     6241 gcgagatttt ttgcgggcgt ttgtagcggt ccacgccgta gttcatcagc gcatggcacg
     6301 agtccagaag ccgttctact tcatccacgc cataacgttc ttcgcactcg gtaatatatt
     6361 tacgggcaaa aatcagataa tcgacaatcg aactggcgtc ggtccaactg cggaataaat
     6421 aattgttttt aaagaaagag ttatgcccat agcaggcgtg tgccatcacc agcgcttgca
     6481 tggtaatggt gttctcttcc atcaggtaag cgatacacgg gttagagtta atgacgattt
     6541 cataggccag tccttgctga ccgtgcttat acagccgttc agtctcgata aactttttac
     6601 cgaatgacca gtgcggatag ttaattggca tgccgacgct ggagtaggca tccatcatct
     6661 gttctgaggt tatcacttca atctggtgcg ggtaggtatc cagccggtag agtttcgcca
     6721 cccggtctat ctctgccaga taaacatcca gcaggtcgaa cgtccagtcg ggtccatcgc
     6781 tcaaacgtgt ggtgtcctta ttcatagaat cgatcgtcgc catacgcgca cctcattgtt
     6841 gtcggcgctc tctgtgtgga gcacctcatt tcaagcatag aacacctgtt aaacaccgcg
     6901 tcgccggaga atttttttct ttgcgatttc ttattatcag agtgccacta atccgcttct
     6961 gaacggaatt ttatgctgga taaaaagggc gttcagcagg agatactaaa gacgccatat
     7021 tgccgcagag tcagggagat gtgagccagc tcaccataaa aaagctgtat gttgaataat
     7081 attttcaact gagttatcaa gatgtaatta gattattatt cttttactgt atctactact
     7141 gtatctaccg ttatcggagt ggctatgcga gttgtcatac tgggaagtgg tgtggtaggc
     7201 gttgccagcg cctggtactt aaatcaggca ggacatgagg tcaccgtcat tgatcgggag
     7261 ccgggggccg ccctggaaac cagtgccgcg aatgccgggc aaatctcccc cggatatgct
     7321 gcaccgtggg cagcaccagg tgtgccttta aaagcgatta aatggatgtt ccagcgccat
     7381 gcgccgctgg cggttcgtct cgatggtacg cagttccagt tgaaatggat gtggcaaatg
     7441 ttacgtaact gcgacaccag ccactacatg gaaaacaaag ggcggatggt gcgtctggcg
     7501 gaatacagcc gtgattgcct gaaagcattg cgcgccgaaa ccaatattca gtatgaaggg
     7561 cgtcagggtg ggacgctgca actgttccgt accgaacaac agtatgaaaa tgcgacccgc
     7621 gatatcgccg tgctggaaga tgctggcgta ccgtatcaac tgctggaatc cagccgcctg
     7681 gcggatgtgg agcccgcgct ggcagaagtg gcgcacaaac tgacgggcgg cctgcagtta
     7741 cccaatgatg aaaccggaga ctgccagctg tttacccaga atctggcgcg gatggcagag
     7801 caggcggggg ttacattccg ctttaatacg cccgttgacc aactgctttg tgacggcgag
     7861 caaatctacg gcgtgaagtg tggcgatgaa gtgattaagg ccgatgcgta tgtgatggcg
     7921 tttggttctt actcgacggt gatgctcaaa ggcattgttg atattccggt gtatccgctg
     7981 aaaggctact cgctgactat tccgattgcg caggaagatg gtgcgccggt gtctactatc
     8041 cttgatgaaa cctacaaaat cgccattacc cgtttcgata accgcattcg tgttggcgga
     8101 atggcggaaa ttgttggctt taacaccgag ctgttgcaac cgcgtcgtga aacgctggag
     8161 atggtggttc gcgatctcta tccacgcggc ggtcatgtcg agcaggcgac tttctggacg
     8221 ggtctgcgcc cgatgacgcc agacggcacg ccggttgtcg ggcgtacacg ctttaaaaat
     8281 ctgtggctga ataccggtca cggcacgctc ggctggacga tggcttgcgg ttccggtcag
     8341 ttgttaagcg atctgctctc tggtcgcacg ccagcgatcc catatgagga tctaagcgta
     8401 gcgcgctaca gccgtggatt tacgccatca cgcccgggcc atttacatgg cgcgcacagc
     8461 taaggaaacg agatgacccg tccgatacag gccagcctcg atctgcaggc attaaaacag
     8521 aatctgtcca ttgtccgcca ggccgcgccg cacgcgcgcg tctggtcggt ggtaaaagcg
     8581 aacgcttatg ggcatggtat tgagcgtatc tggagcgcgc tcggggctac cgatggcttt
     8641 gcattgctta acctggaaga ggcaataacg ttacgtgagc gcggctggaa aggaccgatc
     8701 ctgatgctgg aaggattttt ccatgctcag gatctggaga tttatgacca gcaccgcctg
     8761 accacctgcg tacacagcaa ctggcagctc aaagcactgc aaaatgcacg gctaaaagcc
     8821 ccgttggata tttatcttaa agtgaacagt gggatgaatc ggttgggctt ccagcccgat
     8881 cgcgtgctta ccgtctggca gcagttgcgg gcgatggcga atgttggcga aatgaccttg
     8941 atgtcgcatt ttgccgaggc ggaacatcct gatggaattt ccagcgcgat ggcgcgtatt
     9001 gagcaggcgg cggaagggct ggagtgtcgg cgttcgttgt ccaattcggc ggcgactctg
     9061 tggcaccctg aagcgcattt tgactgggtt cggcctggca ttattttgta tggcgcttcg
     9121 ccgtccggtc agtggcgtga tatcgccaat accggattac gtccggtgat gacgctaagc
     9181 agtgagatta ttggtgtcca gacgctaaaa gcgggcgagc gtgtgggcta cggcggtcgc
     9241 tatactgcgc gcgatgaaca gcgaatcggc attgtcgccg caggatacgc cgacggttat
     9301 ccgcgccatg cgcctaccgg tactcctgtt ttagtggacg gcgtgcgcac catgacggtg
     9361 gggaccgtct cgatggatat gctggcggtt gatttaacgc cttgcccgca ggcggggatt
     9421 ggtacgccgg ttgagctgtg gggcaaggag atcaaaattg atgatgtcgc cgctgctgcc
     9481 ggaacggtgg gctatgagtt gatgtgcgcg ctggcgctac gtgtcccagt tgtgacagtg
     9541 taacttgttg taagccggat cggaggcaac gtcttctggt tgcaaaaaaa aatccatccg
     9601 gctgggcaac aactgtagtt gttaatgtga cagagccatt tcccatgata gtgcccatta
     9661 aaatgatgga cactatttcc ccggaacctg aactcaccgc acaggcgttc tacataaaac
     9721 gcttacgctt cattgttgac tcgaactcga cttcagataa atcacgcttc acccttgatg
     9781 gagcctgtac atagatttgt gtaattgcct gattttgata tgttcaattc aacatcaaat
     9841 gaaggttaaa ttatggacga caaacaattg caggctcagg ctgcgttcag caaagtatcg
     9901 catccggcga tagatgctgc attaaattta agattcagct tcctcttcag ccacccgaac
     9961 gccaatcttc aacacttcat tatcttcttt ctcggccacc gtccagatca tcccggcaaa
    10021 ctctacctgg tcaccgacaa ccggtgccgc gcctagcaac tgctggacaa tttcacccag
    10081 cgtttgctgt ttatcacgat attctcgccc gtcttccagg ccatatatca gcgcaacatc
    10141 agcatatttg gcgctggctt cgagaatgaa gtcaccaaag aagcgttgat ccagcgcgac
    10201 cggtggcgac tggctgaaca gtttaccgag cgccgggaga tcgcgttccc gaccaattac
    10261 acacaataca tcgccttcgc gcagtcgggt gctgccggta ggatgaagca actggttatc
    10321 acgaaacagg gctgcaatac gcgtctcttt tggcatatgc aaatcgcgca gtgccgcacc
    10381 tacacaccat ttatcagcac tcaattgata aacaaactgc tcccatggat tttccggatg
    10441 aatatccagg ccaacgcgtg acaccggacg tccgacgggc ggaaccacca ctttggcttt
    10501 tttcgccgcc cacgagagtg atgttccctg caagagcagt gaaaccagaa ccacaaagaa
    10561 ggcgacatta aagaacagtc gcgcattctc cagccccgcc atcatcggga acacggccag
    10621 gatgattggc accgcgccgc gtaatcccac ccagctgata aacacgcgct cacgcagatt
    10681 aaaaccacgg aacggtagca atccggcaaa taccgaaaga ggacgggcga agaaaatcat
    10741 ccatgcggac aaaatgagcg ccggaatggc aataggcagc agatcgcttg ggttaaccaa
    10801 cagccccagc accaggaaca tggcgatttg cgccagccag gcgaggccgt cgaaattttg
    10861 cagaatgccg tagcggttgc gaatcggccg attacccagc agaaaaccgc acagataaac
    10921 agccagaata ccgctgcctt ccagcgccgt ggttaaagca aaaattaaaa taccgccgct
    10981 taatgccagc aatggatata atccggcggg cagggcgatg cgattaatca tttgcagcag
    11041 taaataacca ccgccaagac cgatgacaat cccgaggcca aattgctgca gaatatcgac
    11101 cacgaacatc caactgacac tgctttcatg ctgctggatc attgcaatca gggtaatcgt
    11161 cagaaagacc gccattggat cattactgcc ggattcaatt tccagcgtcg agccaacacg
    11221 ttcgttaagc cccttaccac ccagcagaga aaagactgct gcagcatcgg tggagccgac
    11281 gatagcgccg attaataagc cttcaatcaa atcaagatta aacagccacg ccgccatcat
    11341 gccggttaaa ccagaggtga taagtacgcc cagcgtcgcc agcgacagcg ccggtcctaa
    11401 cgccacacga aaggaactgg cctgagtgcg catcccgccg tcgagcaaaa taatcgccag
    11461 cgccaggtta cttaccatgt aggcgaaggg gtaattatca aacgggatac cgccgacgcc
    11521 atcgactccc gccagcatgc cgatcgccag aaaaataacc agaataggaa tgccaagacg
    11581 ggaagaaaat gaactaagta atatactgct ggtgacaagg atggatccta agatgaaaag
    11641 gctaattatt gttgtggcat ccaacggtcg gttactcctg attacgctgt ctcttatata
    11701 aaccctacca tattagcggc agagacagcg ttttacttag ccctgaagcg tgattttttt
    11761 acattttaag aacaggatga ccgctaatcg tcaactgagt gccttcccgg gtgttattca
    11821 gaatggcatg tgcgcccaac ggcagcgtaa ccgtgcgttg ttcatgacca aaatcgaggc
    11881 cggtaatgag tggaatcgac aggcgggaac gcaaaaacgc gtacactgac tccaggttgt
    11941 aacctgcgtc ataatcattg ggcgtgctgc cgctaaagct accgagaata atcgccttct
    12001 gacgtggcaa aattcccgca tgatagagct gcaacagcat acgttcgacg cggaaagggt
    12061 gctcgttaat atcttccagc accagaatac cgttctcaat ttttggcatc cacggtgtac
    12121 cgatcagtga aatcagcatc gcaagattgc ctccccacaa cgtgccttcg gcccgacatg
    12181 tcgggccttc ccctagccat tcaatggtaa aggtttcatt gcgtaacgcc agccagaaat
    12241 ggtgctcggt aaaggtgttc agttcatccg cggcaaagtt tgctaccagc atggggccgc
    12301 taaaggtgat gacattgcct tgcgccagaa gaccgcactg aatggcggta aaatcgctat
    12361 gcccgcatat gagcaacggg tcatattgtt ggcgagccac cagtgcctgc cagtcaatat
    12421 ctgccagtaa acgactggca ccgtaaccgc cgcgtacagc cagcacgatg gtgttggggg
    12481 tggtcagtct ggcaagggaa ttgagatctt ccagacgctc cgtttccgta cccgcaaaac
    12541 gctcacaacg acgggcaata acctcgacgt tattgacttg atgccccgcg tcggtaaggc
    12601 gctggatacc acgcagcgcg gcgtgctgtt taatgctgta acccgatggg gcaattaagt
    12661 gaaacagaga catggcaatt ccttgctgac aacagaaacg aaatgtatat catgccgctt
    12721 aggtgtgccg ttgtcacctc aacggcgatt ccaggctata aggatagaag aagtgaaatt
    12781 gagatggttt gcctttttga ttgtgttatt agcgggttgt tcatcaaagc atgactatac
    12841 gaacccgccg tggaacgcga aagttccggt gcaacgtgcg atgcagtgga tgccaataag
    12901 ccagaaagcc ggtgcagcct ggggcgtcga tccacaattg atcacggcga ttatcgctat
    12961 cgaatcgggt ggtaatccga acgcggtgag taaatcgaat gccattggtt tgatgcagtt
    13021 aaaagcttca acctccggac gtgatgttta tcgccgtatg ggctggagtg gtgagccgac
    13081 gaccagcgag ctgaaaaatc cggagcgtaa tatttctatg ggggcggctt acctgaatat
    13141 tctggaaacc ggcccgctgg caggcattga agatccgaag gtactgcaat atgcgctggt
    13201 ggtgtcatac gctaacgggg caggtgcgct gctacggact ttctcgtcag atcggaaaaa
    13261 ggcgatcagc aaaatcaacg atttggatgc tgacgagttc ctcgatcacg tagcgcgaaa
    13321 tcatcctgcg ccgcaggctc cgcgttatat ctacaaactt gagcaggcac tggacgcgat
    13381 gtaaatcagt cgcgtacttt gtccgctttc tcccgggctt ctcgctcgag agagaaaata
    13441 atccgctgta attgccgctc caccgtcggg ctgacgttaa gaaaacggaa gctcagacgg
    13501 ggagtggtga tggcttcatt cttgccatca atcactttgt gctcgctgat ggagattaac
    13561 tgggcgtcaa agtgaaaaac accccattgc cccatgttga cttcaatctg agcgaagcgc
    13621 atgccttctt gtaattcggc aggctttgct gtttccagta atgcgcccat accgcctaac
    13681 gacaaatcat acaggcggaa acgtaacgta ctgttatccg ccagtttggt ctggcaaaaa
    13741 taaggcggat ggagtggggc ggagatgcgg aaatatcggc gtcgttgtac aaaccataag
    13801 gtgggaggcg gtacggtaat aaatgccgga agctgcaagt attcactctg ctgtagttgt
    13861 tcaacagtaa actcgacttt cgcaccctga gtttcggcgg taatggtaat gtgctgtgcc
    13921 tttagcacgg cgatgttgtc ttcggcttga ctgccgaaat ccagcaccag tttatccggg
    13981 gttattgcca gtattttgct gatcagctgc ccgccattcc aactgagacg caaaggaatt
    14041 gcggctttgt gcaaatcgcg taacacgccc aggacggcta acggattttg tttcaggaac
    14101 tgctcatggt aatgactcac gcggaaaaac tcctgactga caaactgtct ttggtttatc
    14161 ggtcatagtt aacaaaactt aatacaaatg cgtgaatatt ttttacatgt tgttcttaaa
    14221 tcagccgaca aacgcccagc atcgatcccg cccttgccta tacttagagc gttgacgtaa
    14281 gcatttcttg cgaccgattc atcgaaacga gggcctgaac atgggaatta ttgcctggat
    14341 tatttttggc ctgatagccg gcattatcgc caagctaatc atgccggggc gtgatggtgg
    14401 tggatttttc ctgacctgta ttctcgggat agtcggtgcg gtggtcggcg gctggctggc
    14461 gaccatgttt ggcattggcg gctccatcag tggttttaat ctgcacagct tcctggtggc
    14521 ggtagtgggc gctatcctgg tgctgggtgt atttcgcctc ctgcgaagag aataagattt
    14581 tcataaggcg gatagcgata cagatgccgc tatccgcttt tcacatcaga acgtatattc
    14641 gacacctgct ttacgggtga aaaaaatcaa tatagcactt cgatatccga taaagtcggt
    14701 tcccggtaac aacaacagaa tcctttttta attattgttt cgttgttttt ggtgtgattc
    14761 agaaaataaa tattttagac agtagccagt caggcgttaa aaatggggcg gatagtgagg
    14821 cggttttggc tgcgcttatt gaacatttag aattgatcaa tccttctggc agattaagcc
    14881 aaaatacccg ttcggcaatg cttcagttac gcgaagagga atggtctgaa ttcttttttt
    14941 ggttgctaaa ttctctggag tgtctggatt atgtgattat taatttaact ccagaaaaca
    15001 aaaaaacgtt gatgagcgaa caccgtaaca atattcaggt agcaatcgat gctttatata
    15061 ggcaacgtcg gcgtaaatcg ccgggtgatg atagtgaaac acttacccat agaaatgacg
    15121 ctatcttcgg caaccacgta tggcagacat ttgcgcaata cttcccgcca ggacttgaaa
    15181 aaccgtctgt gtagaaaaaa ccatagatat ggtgttatct gccgacaacg ccatccggag
    15241 aagccgaatg acgttgtcgg agtaagcgct ggttaaggtg tgggttgagc ctctttggtt
    15301 gagggttgcg tcgttgttga cttagcagtc ggacgcgtcg ccggaacatt gtcacacggt
    15361 tgctctttcg gacaaatcaa atccagcatt tttagcgtca tgccattggt ccagccaaag
    15421 ccatcctgta atggatattc gccaccgccg ccccccgttc cggtggtgct gacatcatat
    15481 ttttccacca gctttttctc ccggtcatag gtgtgctgaa cattggtcag gaagtgccag
    15541 ctaatgtcca tcgccacctc tttttgcccg tagttttgta atccttctgt cgcgatccac
    15601 tgtaacggtg cccagccatt tggcgcatcc cattgttgcc cacttttcac cgacgtggtg
    15661 ttcaggccgc cgggttgcag cagatgtgtt ttcgtcgccg tcgccatttt gttggcgcga
    15721 tctttcgctg ccgcattgac gtacagcggg aacagggcgg ccgcggttaa ctgattgcgc
    15781 actttatgac ttttcaggtc gtaatcggca taccagcctt gttgatcgtt ccacaggtat
    15841 ttttcgatcc ctttttgacg ggcatttgcc agcgtttcgt actggtttgc catcgcgtta
    15901 tctccggcag ctttgctggc gcgggcgagg attttttcca ttttaaacat caggctgttc
    15961 agatcgaccg gtacgatgct ggtggtgcgt aaggtattta actgctgcgg gttgtccatc
    16021 cagcgcgagc tgaaatccca gccagacgca gcggcagagc gcaggtcgcg gtaaatttca
    16081 gtggcaggtc gattcggatt gcttttggcg gtggcaatat cttccaccca tgactctggt
    16141 cgtggcgtat cgcgatcgtc ccagtagcgg ttgagaaggg taccatcctg aagttttaca
    16201 acgcgttttt cctgttgtcc ggcttgcagg ttttcaacac cgtccatcca gtaagcatat
    16261 tctttttgca tttgcggcag gtattgcttc aacgcggcat cgccttcatg ctgcgccagt
    16321 aactctacca tcagggcaaa gaagggcggt tgcgagcggc ttaaatagta actgcggttg
    16381 ccgttgggaa tatgaccgta agtgtctatt tcatgagcaa aattggccac catatccgcg
    16441 actttatccc agtgaccgct ttcggcaagt cctaacatgg tgaagtaact gtcccagtaa
    16501 tatacctcgc gaaaacgtcc gcccggcacg acataaggtt ccggcagcgg taacagagaa
    16561 tcccattttt cggtgttttc ggtagaacgc gttaataccg gccaaagtcc gtcaatatgt
    16621 tcgcgcagtg actgcccctc tggcggaaca tatttctcgc cctctttcgg cagggtgaaa
    16681 ttgacgttaa cgaaatggcg cagatcaaat ccgctctggt tttgctgcat ccgataatca
    16741 gcaaggatca tcagcggatc gctgttcggc acggcatcgg caaaggtttt ttggtccgga
    16801 aaaagtttgg cgttttgcac atcattaaac agcggcccta ataaaatatc aggcggctgt
    16861 ggtgttaccg gtgtttcttc tgcctgcacc gatagcgcag cgaaacacaa aaagatacag
    16921 gctggaatta acgccatttt ttgcgggcga gaaggtgcgg gggatttcat caatcattct
    16981 cctttggcga aaccgaataa aacggtattc aagtatcaga aaacctt
//
LOCUS       DAJVTL010000098        16527 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.100, whole genome shotgun sequence.
ACCESSION   DAJVTL010000098 DAJVTL010000000
VERSION     DAJVTL010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16527
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.100"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..602)
                     /locus_tag="OQQ26_003054"
     CDS             complement(<1..602)
                     /locus_tag="OQQ26_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HCS1858428.1"
                     /translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
                     YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
                     RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
                     EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
     gene            1122..2021
                     /locus_tag="OQQ26_003055"
                     /pseudo
     CDS             1122..2021
                     /locus_tag="OQQ26_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417978.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            2070..3083
                     /gene="yhjD"
                     /locus_tag="OQQ26_003056"
     CDS             2070..3083
                     /gene="yhjD"
                     /locus_tag="OQQ26_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HCS1858429.1"
                     /translation="MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEK
                     VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
                     LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMSNLREAI
                     RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
                     LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
                     KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGK
                     TQP"
     gene            3494..4816
                     /locus_tag="OQQ26_003057"
     CDS             3494..4816
                     /locus_tag="OQQ26_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HCS1858430.1"
                     /translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
                     AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
                     TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
                     LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
                     LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
                     AAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIILFALF
                     AFNPQLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVASI
                     LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETRHQSL"
     gene            complement(5050..7110)
                     /locus_tag="OQQ26_003058"
     CDS             complement(5050..7110)
                     /locus_tag="OQQ26_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HCS1858431.1"
                     /translation="MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSA
                     ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFG
                     LKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGG
                     VDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGD
                     SDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKS
                     VQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQP
                     LKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAE
                     LRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILS
                     QMKK"
     gene            complement(7180..7947)
                     /gene="pdeH"
                     /locus_tag="OQQ26_003059"
     CDS             complement(7180..7947)
                     /gene="pdeH"
                     /locus_tag="OQQ26_003059"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709303.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HCS1858432.1"
                     /translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
                     MAVELLTVVTHPLNPSQRPPPDRYFTEITVSHRMEVVKEQIYLLAQKADFFIEHGLLA
                     SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDF
                     GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
                     TPEEWRDVQNSPAFAAQGWFLSRPAPMETLNTAVLAL"
     gene            8179..9108
                     /gene="kdgK"
                     /locus_tag="OQQ26_003060"
     CDS             8179..9108
                     /gene="kdgK"
                     /locus_tag="OQQ26_003060"
                     /EC_number="2.7.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417983.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygluconokinase"
                     /protein_id="HCS1858433.1"
                     /translation="MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPA
                     ALTVHYVTALGTDSFSQQMLDAWRGENVDTSLTQRMENRLPGLYYIETDSTGERTFYY
                     WRNEAAAKFWLESEQSAAICAELANFDYLYLSGISLAILSPTSREKLLSLLRECRANG
                     GKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTH
                     NAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT
                     GGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
     gene            complement(9204..10700)
                     /locus_tag="OQQ26_003061"
     CDS             complement(9204..10700)
                     /locus_tag="OQQ26_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HCS1858434.1"
                     /translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
                     QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
                     QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
                     QSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
                     TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
                     IMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
                     QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
                     DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
                     QPKGEPEFNMKALQAAWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ"
     gene            complement(10921..12207)
                     /gene="dctA"
                     /locus_tag="OQQ26_003062"
     CDS             complement(10921..12207)
                     /gene="dctA"
                     /locus_tag="OQQ26_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DctC"
                     /protein_id="HCS1858435.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
                     AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
                     LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
                     VLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
     gene            complement(12390..14378)
                     /gene="hmsP"
                     /locus_tag="OQQ26_003063"
     CDS             complement(12390..14378)
                     /gene="hmsP"
                     /locus_tag="OQQ26_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HCS1858436.1"
                     /translation="MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIP
                     ERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLV
                     TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIIT
                     CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA
                     ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK
                     NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ
                     QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL
                     MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF
                     GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVE
                     TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK"
     gene            complement(14460..16326)
                     /locus_tag="OQQ26_003064"
                     /pseudo
     CDS             complement(14460..16326)
                     /locus_tag="OQQ26_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000927333.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BCSC C-terminal domain-containing protein"
BASE COUNT         3913 a         4551 c         4121 g         3942 t
ORIGIN      
        1 caggaggaga tatttaacat cattgccgcc tgggtgcgat ttttcacttc cagacggcga
       61 tacagggatt ccagatgcgc ttttaccgtt ccggtactga tattcagcgc tctgccgatc
      121 tccttatttg attcgcccgc cgctaacatg gttaaaatct cccgctggcg ggcgcttaac
      181 gatttgagat ctttaatgtc cttttccggc gtcgtccgcc agtctccagg cagaaacatc
      241 atccccatcg ccgcactatt taccgccaac gcaaatgtct cgacggttga atcacgaggc
      301 acaatggcca gcacattaaa atgaataact tcctgtaacc accgtttatt gcaatccgtc
      361 gccgtgatta acaccttaac ctcaggaaac tgcaccacgg ttttttgcag caaccagtag
      421 caaaactcac catcctgatc gccatcgagc ataactaagg cttcagggta actttccagc
      481 ttttgccata actcgtctgc ctgactggcc ccctgaatac tcactcctgg aatacgctgc
      541 tgtaaactga ttttcattcc atgaataaat attgactgcc tgtcaaacat gactatttgc
      601 ataactgaat ctccacctga atacgttaaa aagacttaag tagtggaagg gtattacccg
      661 cgagaaaaaa taagaattcg ccatttggcg gtggccattc tacagagatg acgcgtagaa
      721 aatagttacc gatataaata gttacagcta aacgcctgaa attacatgtc gagggcacta
      781 tttaaaacaa ttttgaggat ttccttatat tgatggttag tacgcatgca attaaaaatg
      841 aaattccgcg accacaagcc aaaataacaa acggcaatga gacaaaaata agcacaaata
      901 gccaatacgt cctctattca ctttaaaggg aatcgctgaa aaatacgctc tgtttagggg
      961 gattcacctt tctcagaaag ctattccgcc cttttcctgc tgagaaatcg ccacattcgt
     1021 catgacaaca ttgtgaaacc cggcattaga tgttagaaaa aacaataaac aatgcgatat
     1081 gcgcgttact gtttcgctgt gaacaacaat cggtcaaaga aatggataaa attcacgcaa
     1141 tgcagttgtt catcaaagtc gcggagctgg aaagtttttc ccgcgcagcg gatttctttg
     1201 ctttgccaaa gggaagtgtt tcgcgccaga tacaggcact ggaacatcaa cttggcaccc
     1261 agcttctcca gcgcaccacg cgacgggtca aactcacgcc agaaggcatg acctattatc
     1321 aacgggcaaa agatgtgttg agtaatctca acgaactgga cggtctgttt caacaggatg
     1381 ccaccagtat cagcggtaaa ttacgcatcg acatcccgcc aggaatcgca aaaagcctgt
     1441 tactgccgcg cctgtcggaa tttctctatc tgcatccggg aattgagctg gaactgagta
     1501 gccatgaccg tccggtagat attcttcatg atggttttga ttgcgtgata cgcactagcg
     1561 cgttaccgga agatggcgtt atcgcccgtc ccctcggcaa actgaccatg gtcaactgtg
     1621 ccagtccgca ctatctgacg cgctttggtt atccgcaaag ccccgatgat ctgacttcac
     1681 acgcaatagt gcgttataca ccgcacctgg gtgtacatcc gttaggtttt taggttgcca
     1741 gcgttaatgg cgtccagtgg tttaagtctg gcggcatgtt gacggtaaac agtagcgaaa
     1801 actatctcgc cgccggtctt gccggtctgg ggattattca gatcccgcgc attgccgtgc
     1861 gcgaagccct gcgtgccggg cggcttattg aagtgttgcc aggctaccgt gccgagccgc
     1921 tctccctttc gctggtttat ccgcagcgta gggagctttc ccggcgtgta aacctgttta
     1981 tgcagtggct ggctggcgta atgaaagagt acctggactg accgactata ctttttaaga
     2041 atgaccacga cagaaggaca aaagagcgga tgacgcagga aaacgagatc aaacgtccca
     2101 cccaggatct ggagcacgag ccgattaagc agttggataa tagcgagaaa ggcggcaaag
     2161 ttagccaggc gctggaaacc gtcaccacca ctgccgaaaa agtccaacgc caaccggtta
     2221 ttgcgcacct gattcgcgcg acagaacgct ttaacgatcg gctgggtaac cagtttggtg
     2281 cggctatcac ctatttctca tttttgtcga tgataccaat tttgatggtg tcgtttgccg
     2341 cagggggctt tgtgctggcc tcccatccga tgttgctaca agatatcttc gacaaaattc
     2401 tgcaaaacat cagcgatccg acgctagccg ccacattaaa aaacaccatc aacaccgccg
     2461 ttcagcagcg tacgactgta gggcttgtcg gcctggcggt ggcgctttat tccggcatca
     2521 actggatgag taacctgcgt gaagcgattc gtgcccagtc gcgcgatgtc tgggaacgct
     2581 cgccgcaaga tcaggagaag ttctgggtaa aatatctgcg tgattttatt tcactgattg
     2641 gtttgttgat tgcgctgatt gtgacgctgt cgatcacctc ggttgccggt tcggcgcagc
     2701 aaatgattat tagcgccctg cacctgaaca gcattgagtg gctgaaaccg acgtggcggt
     2761 tgattggcct ggcgatttcc atcttcgcca actatctgct tttcttctgg atcttctggc
     2821 ggttgccgcg ccaccgtccg cgcaaaaaag ccctgattcg cggaacattt ctggctgcta
     2881 ttggttttga agtgattaaa atcgtgatga cctacaccct gccatcgctg atgaaatccc
     2941 cctctggcgc agcatttggt tccgtgctgg ggctgatggc atttttctac ttcttcgccc
     3001 gtttgacgct gttttgcgcg gcgtggattg ccaccgccga atataaagac gacccgcgaa
     3061 tgccagggaa aacgcagcct taaaataggc cggatgcggc gtaaacgcct tatccggcat
     3121 acgattttat tcggcctggc tccccgtaag ccggataaga tgcgccagca tcgcatccgg
     3181 ctataatgcg cacataacct cttgaaactc ttccccagag cctcttcagc catctatttg
     3241 ggagcaaaca atttcattcc aactcataac cccagcatat aaatccagtt ggtaactttt
     3301 atttaacctg aaaccagttt tatccactat ttataaaatc atgcgaagca tttcatagaa
     3361 gaaaaatcac tggcctaaac attatcccct ttttgcctgg tttttgacca tttccgcgat
     3421 ttgttacaca ttgaaatatc acttttgctg tgcgtaatat ggctattcgt tagccaaaaa
     3481 ataagaaaag attatgcaag caacagccac aacactcgac cacgagcaag aatacacgcc
     3541 gatcaactcg cgtaataaag tccttgtcgc ctctctcatt ggcacggcca ttgagttctt
     3601 cgacttttac atttacgcca ctgcggccgt tattgtgttt ccgcatatct tcttcccgca
     3661 gggcgatcca acggcagcaa cgctacagtc gctcgccacc ttcgccatcg ccttcgtcgc
     3721 gcgccccatt ggctctgccg tttttggtca ttttggcgat cgcgttgggc gtaaagcgac
     3781 gctggtcgcc tcgttgctaa cgatggggat ttcgaccgtg gtgattggtc tgctgccggg
     3841 ctatgccacg attggtattt tcgccccgct gctgctggcg ctggctcgat ttggtcaggg
     3901 tctgggctta ggcggtgaat ggggcggcgc ggcgctgctg gcgactgaaa acgccccacc
     3961 gcgcaaacgt gcactgtatg gctccttccc acagctgggc gcaccgattg gcttcttctt
     4021 tgccaacggc actttcttgc tgctttcctg gctactgacc gacgagcagt ttatgagctg
     4081 gggctggcgt gtgccattta tcttctcggc ggtactggtc attatcggcc tgtatgttcg
     4141 cgtgtcgctg catgagtcgc cggtgtttga gaaagtcgct aaagcgaaaa aacaggtgaa
     4201 gatcccgctg ggtacgctgc tgaccaaaca tgttcgcgta accgtactgg gtacgttcat
     4261 catgctggca acatatacgc tgttttacat catgacggtc tactctatga ccttcagtac
     4321 cgccgccgcg ccagttgggc ttggcctgcc acgtaacgaa gtgttgtgga tgctgatgat
     4381 ggcagttatt ggttttggcg tgatggtgcc agtcgccgga ttactggctg atgcctttgg
     4441 tcgccgtaaa agcatggtaa ttatcaccac gctgatcatc ctgttcgcgc tgttcgcctt
     4501 taacccgcag ctcggttctg gcaacccgat tctggttttt gccttcctgc tgctggggtt
     4561 aagtctgatg gggctgacct tcgggccgat gggcgcgctg ttaccagagc tgttcccaac
     4621 agaagtgcgt tacaccggag catcgttctc ttacaacgta gcgtcgattc tcggggcttc
     4681 cgttgcgccg tatatcgcag cctggttgca gactaactac gggttaggtg cggtggggtt
     4741 atatctggcg gcgatggctg gcttgacgtt aatcgccctg ctgctgaccc atgagacgcg
     4801 acatcagtcg ttgtaagtat cgtgtgggca gccaccctca ccccagccct ctccctgaaa
     4861 gggagaggga gaaaagcgga gcgagatgtt atatcgcgaa cataacagcc ctcccccaga
     4921 aagtgaacgg aaaagcggta ctcgttgttt caacacgcac aaaacagtcc cctcttccct
     4981 ttggggagag ggttagggtg aggggaacac gctgctcccg aactcaccag caaacacaat
     5041 ccaacctcat cacttcttca tctgcgacaa tatcgtccga cactgattag cctccccttc
     5101 ggaaggtgag atcagtgcca gtaacgccgc cgccggtgtt accagcgttg ccagtgccgc
     5161 agcaacagca ccacgggcaa tcagcggtcc ggctttcacc ccagcctgcg gatttttaaa
     5221 cgtcccacgc acatacagcg gcgaacgcag tgtgataatc cgaatccctt tactctccgg
     5281 atcaatagtc aaatccagtt gttccgaagc aaaacttgcc gtgccggtaa cattaatcaa
     5341 cgcgttctca gtatcgaaag caaaaatctg cgggcgcgcc acgccgttgg caatattcag
     5401 attcgccgcc gcgcagttca cccgcacctc atcgtcacca aatatcgcac cgacaatgta
     5461 gttgccgaca ttcagcccaa caatctccat caggttgcgg ctcaccagcc cgtcattcat
     5521 caacagtttc aggttgccgt tactgttgcc taaaagcgcc gccaccgagt taccgctacc
     5581 gcgtagttcc gcgtcaccgt tcatttcccc cagcgtcttc tgcatcagtt ccacatcggg
     5641 catcagttct ttcagtttca gtcgacgagc ctgaatatct gcccgcccct gcatcggctt
     5701 tttatcgcct tccagatgaa tattcgccgc aatgctgccg cccgccatgc caaatttcag
     5761 cggttgcagg cgcaggtcag catttttgag gatgatatga gtagaaagat cgctaatcgg
     5821 caggctactg ccatgctcaa tgcgccgccc tttgaagcga acatcggcat ccataacgtc
     5881 ccatttatcg gtttcgaagc ggtcataagg cagcactttg cccgcaggct gaacgctttt
     5941 ttcgcccttc ttctgttcag accgtttcga cttttctgcc cctttcccgg aatcaacgcc
     6001 aatcaacggt cccaggtccg ccagccgcaa ttgccgcgac tcgacatcac cttccagttt
     6061 tggtcgtggc tttccggtgg tgtagaccag agaaccgtgg atatcgctat cgccaattcg
     6121 cccattaaaa ccgcgataat caaagaccga cgatttttca gtgtcgattt tcgctaccag
     6181 ccgaccatcc gtttcaaacg gcggggtatc gggcagcaga acgcccgtca gttcatagag
     6241 atcacccagt gaatcgccag aaaatttaag ccgtaaatcg acaccgccca tcttcattgg
     6301 gtcattcacg acgccatcaa aagcaacacg ggtattacct gaacggaaat cagcctgtac
     6361 cggaaacggc gtcccttcgc cacgcagcgc cagcataccg cctatttttc ccgtacccgt
     6421 gagcggttca ccgttataac gtccctgcgc cttcaggcca aaaacgtaat cgcccacctt
     6481 ttctttatcc gctttacctt tcgatccagt aacttcgctg aatggcagcg gcttgcctaa
     6541 cggatcaaca aaaatttcca gatccgcttt gcttactttg tcatcaatgg cgatccgccc
     6601 ttgatcgaaa agaatattat ccagccgaaa cgaccatgcc gacggctttg cattcgcgtc
     6661 tttgttgtca tcgttggcaa gattaaacgt ccaattattg ttcttttcag agaggcgaat
     6721 caggcgcgcg tcgggctttt cgagcttgat ccacggcagc cagaccgttt tggtcagcag
     6781 cgccagcggt gccagcgttg cctctactcg cggcaaatgc accatcgtga cttcgggaat
     6841 atccggtgga ttaccaagaa tgatgtcttc tgcatgtaca tgaggccacg gcacccagct
     6901 gcgccagcca gtttcttgtt tttgccgctc ccacaccacg cccagatcgc cacggatagc
     6961 gaacggacga ttcaactccg cagagacttt ctggttgatg gtcggtttga gtcgattcca
     7021 gtcaaaagtt gcaatcaaaa tgatcgccac gacaatcaac aacaagaaag cccctgaaat
     7081 cgcagcggtt attttgcctg ccttgctcat cgttcgcttc ctcatattct tcctgtgcca
     7141 gtcctaaaga tagtccagcc cggcggaaaa tgaggcagct tatagcgcca gaaccgccgt
     7201 attcagcgtt tccatcggtg ccgggcgtga aagaaaccag ccttgtgcgg cgaatgcggg
     7261 cgagttctga acatcacgcc actcttccgg tgtttctacg ccctcgacaa tcaccccgcg
     7321 acaatagcga ttcattagat gtaaaagctg agaaaagagt gtgcggcctt ccggcgactg
     7381 acgcagcatc acaaacagtt ctcgcgcgat tttgatgtag tcataacgca cttcacttag
     7441 tgcagagaaa tttgccatcc cggtaccaaa atcatccagc cacagcgggc caaattcaca
     7501 catcgaggca aaggttgaat ctttcggcag acggatatgc tccaccagtt cgaaacgcag
     7561 ccagggaaga cgctcaatct ggcgcaggat ttttggttgc tgacgcaggg cgatgagcgt
     7621 agggccatca atattgaccg atgccagcag gccgtgctct ataaagaagt cggctttttg
     7681 cgccagcaaa taaatctgct ctttcacaac ctccatccga tggctgacgg tgatttcagt
     7741 aaaatagcga tccggcggcg ggcgttgcga agggttcaag ggatgcgtga ccaccgttaa
     7801 tagctctacg gccattaacc gcccgcatgt ttgatagatc ggctgccagg tgtaagcacg
     7861 ctcacactgc aaccaaaaac gccgttcctg caagctctcg atgcttgctt cagggttgct
     7921 tattcgctgg ataacctgcc ttatcatcaa agatgtcctg tgtttaaaag tgatgctgcc
     7981 cggactcgac aaagattatc ggcgcgtaag ggcagaactt taccgcctgg ccggggtaaa
     8041 tttcctcact ccacaacgga atctttcagg aatacgtcct ggctccaaaa aataatggaa
     8101 cactgtttta atattgttga ccagcaaacc accacagcgc aaactaacgc taatttttta
     8161 cagatcaggt tcacgactat gtccaaaaag attgccgtga ttggcgaatg catgattgag
     8221 ctttccgaga aaggcgcgga cgttaagcgc ggtttcggcg gcgataccct gaacacttcc
     8281 gtctatatcg cccgtcaggt tgatcctgcg gcattaaccg ttcattacgt aacggcgctg
     8341 ggaacggaca gttttagcca gcagatgctg gacgcctggc gcggcgagaa cgttgacact
     8401 tccctgaccc aacggatgga aaaccgactg ccgggccttt actacattga aaccgacagc
     8461 accggtgaac gtacgttcta ctactggcgt aacgaagccg ctgccaaatt ctggctggag
     8521 agcgagcagt ctgcggcgat ttgtgcagag ctggcgaatt tcgattatct ctacctgagc
     8581 gggattagcc tggcgatctt aagcccgacc agccgcgaaa agctgctttc cctgctgcgc
     8641 gaatgccgcg ccaacggcgg aaaagtgatt ttcgacaata actatcgtcc gcgcctgtgg
     8701 gccagcaaag aagagacaca gcaggtatac cagcaaatgc tggaatgcac ggatatcgcc
     8761 ttcctgacgc tggacgatga agacgcgctg tggggtcaac agccggtgga agacgtcatt
     8821 gcgcgcaccc ataacgcggg cgtgaaagaa gtggtggtga aacgcggggc ggattcttgc
     8881 ctggtgtcca ttgctggcga agggttagtg gatgttccgg cggtgaaact gccgaaagaa
     8941 aaagtgatcg ataccaccgc agctggcgac tctttcagtg ccggttatct ggcggtacgt
     9001 ttaacgggcg gcagtgcgga aaacgcggcg aaacgcgggc acctgaccgc aagtaccgtt
     9061 attcagtatc gcggcgcgat tatcccgcgt gaggcgatgc cagcgtaaaa gcagcatatg
     9121 caaaaggctg gataaagtgt tacccctcta tccagctcat ccataaatac ctgatgattg
     9181 tgctaactca tcaccatcag gcattactgt gcaggtggaa tatccgtcac ttcaggatgt
     9241 acgtcatccg tggcgacaga ggtggtcgca gcggcggtag atggggccat gatttgatcc
     9301 caggccgcct gcaacgcttt catgttaaat tccggctcgc ctttcggctg cagcagtatt
     9361 aacgccatat cattcgacaa ctgctgacgc agatcctgat ttaacatctc cacagtcagg
     9421 ctgttaagga aatcctgccg cagtttctga tactgctccg gcgcgatatc gacgacctga
     9481 ttttgcaacg aacgcatccg ctgacccatc agaatatcgg tatcagctcg tgcataggcg
     9541 gcaaacagtt tctgcagctc cagtttcttt tgcgccacta acgcattgaa ctcttcttcc
     9601 ggcagacctt tatcgcgaac cttcgccagt tcacgcgcca ccagattaag gttgctgttc
     9661 agcttgtcgt ttggtgattc gatgttgatg gcacactgcg cacgcagata cagcacacgg
     9721 cagtcaaatc caagaccgat gtctttgctg ttactggcgc ttaacgcttg ctgaacatgc
     9781 cagaacagcg cctcacgggc caggtccgca cgccagtagc gcagcagtgc ggctgattca
     9841 cgaatcggct gccacggcgt atcccacatg atagataacc ggtcctgacg caccgcgtca
     9901 gtcataatac tcaccgcttc cgcacgcagc ggagaaagcg tcggcaccgg agccggtgtt
     9961 tcacgtttgc ctttcagttc gccaaacgtt ttgttgattt ggtcgacaac cgagcgcgca
    10021 tccacgtttc ccaccaccag cagcgtcatt gcatccgggg tgtaccattt ctgatagaaa
    10081 tctttaatct tttccgcttc aacgggttgt ttcagcggat cggcaggatc gtgacctaac
    10141 aaggttgacc ctttcagacg atagcgccac cagccctctt tagtatcggc aggccaggtt
    10201 gccaccatgt cctgactttg cagcgcgtgg ttgatggttt ctggcgtgat agtcagtttg
    10261 ccagtggcat ttgccagata agagagcgcc tctttcagca aatcgttacg gttattgggc
    10321 aaactcagat taaacagcgt ggtgtcataa gagacaatta ccggcggcat cgggcgttta
    10381 gggtcgatcc cctgctgcca caatgaacgc gcctgtgctg cgtcaaggcc accgctttgc
    10441 gttagcgcaa tacgagggat ggcgtgactg taaccgctct gttgtgtact ttcggcgagc
    10501 gaaccggtat taaccagcag gcgaatttca acacgatcgc tgggacgctg gggggtggtc
    10561 agcacttgcc actgtaaacc gttggaaagc gtcccctgtt gccatgctgg atcaggctgg
    10621 agcgcatctg cctgcacata gccagcagtg gccatcatca gcaaaccgcc cgctaaaagt
    10681 cgaatttttg tgccctgcat gtgaacccct gatcaactat cctggtaata aaaaaactgc
    10741 ccgttgtcgg tcagtctaaa tgacgttaaa aacacttcgt gttagaccgc aagaacatga
    10801 aaatgtcacg gaagaagtga aataaacctg aactcaccca ggtggtaagt tcaggcacag
    10861 gggtcaatta tgcgcaaaca cccgcactcg gggaagggag tgcgggcata agtgatgaga
    10921 ttaagaggat aattcgtgcg ttttgccatc cggcgcacga ttattcagca catcgtccag
    10981 ttttttgtgg tccagttctt tcacccactt agcaacgaca atggtcgcta cgccgttacc
    11041 gaccaggtta gtcagcgcac gagcttctga cataaagcgg tcgataccga ggatcagcgc
    11101 cagacccgct accggcaaat ggcccaccgc agagagcgtc gccgccagca cgataaagcc
    11161 actaccagtt acccctgccg cccctttaga agaaagcagc aacacgatta acagcgtaat
    11221 ttggtggacg atatccatct gactgttagt ggcctgggcg ataaacaccg ccgccattgt
    11281 caggtatatc gatgtgccat caaggttaaa cgagtagcct gtcgggatga ccagccccac
    11341 caccgatttg cggcagccga gtttctccat cttgtcgagc atacgcggca gcgccgactc
    11401 ggaagatgaa gtccccagta caatcagcag ttcttcacgg atgtagcgga taaatttgaa
    11461 gatactgaaa ccagtcgctt tagcgattga acctaatacc agcaccacaa acaggataca
    11521 ggtgatgtag aaacagataa tcagctgccc cagttgcacc agtgtgccga cgccgtattt
    11581 accgatggta aacgccattg ccccgaacgc accaataggt gccagacgca tgatcatatt
    11641 gatgatgccg aagatgacct gcgagaaact ttcgatgacg ttaaaaatca gttggccttt
    11701 gctgcccaga cggtggagcg caaaaccaaa cagtacggca aacagcagca cctgcagaat
    11761 gttaccgctg gcaaatgcgc caatgacgct cgccgggatg acatccataa tgaaggctac
    11821 aatcccctgg tctttcgcct gatcggcgta aaccgctacc gctttcgcat caagcgttgc
    11881 cggatcgacg ttcattccgg caccaggctg cacgacgtta acgatgataa gaccaataat
    11941 cagcgcgatg gtactgacaa tttcaaagta aagcagtgcg actgcgccgg tacgaccgac
    12001 cgccttcatg ctttccatgc ccgcaatgcc cgttacgacg gtacaaaaga tgacaggagc
    12061 gatgatcatc ttaatgagct taacgaagcc gtcgccaagc ggtttcattt gctcgcctat
    12121 ttcagggtag aaatggccaa ggagaatacc aatggctatc gctgtcagga cctgaaagta
    12181 aaggctttta aacagagagg ttttcatagg gtgtccttta gtaaaaccac aggtcttgta
    12241 aggttatggg gtacctgcgg ccttaaaata acacccagac aacatcacag aaatgtacct
    12301 agatcataat tgaaacaaaa aggttaaaaa gtttgagctg gctcgcacaa accagcactt
    12361 tttaaagttt tgtaatcagt ttggggtagc tacttttctt ccaggtaact ctcttcgaag
    12421 atttcaatag ggagtgggcg agcaaaaagg aagccctggg caataccaac gcccgctttt
    12481 gccagccagt cacgttgtgc ttcagtctcc acgccttcgg caatcatttg taaattcagg
    12541 ctctgcgcca gcatgataat tgcagcaatc atgctgctat cttccggcaa gccttcaaca
    12601 aacattttgt cgattttcag tacgtcgatt ggcaacgatt tcatatgctg cagctgacgc
    12661 agccctgcgt agcccatgcc gaaatcatcc agcgccaccc gaactccggc attgcgcagc
    12721 ggacggagga ttgccaccgc agcatgaggg tcgtcaatac gtcggctttc tgtcacttcc
    12781 agaatcagtg ttcccggctg aatacgatag cgggttaaca gttccagcat atccgccacc
    12841 atatttgggt gcatcagttg cagcgcagag aggtttaccg acaagggcag cataatgccg
    12901 cgctcttgcc aggctgcaag caatcgacag gactcttcca gcacccagtg accgacggta
    12961 accatcagcc cacagcactc aatgcgatcg attaagccat ccggcaggtc ccaactgcca
    13021 tccggttgct ggatacgcag taacacttcc gcactgacca gtttaccgct ggtcatctcg
    13081 acctgtggct gtaaccaaat agcaaactga tgattttcca gtgcattaag gatatcgctc
    13141 tcttccgtca accgcttctg ggcggcttcc atctgctgcg gatcaaagaa ctgaatctga
    13201 ttcttgcctt tatggcgagc ggtaaatgcc gcagaaatag cgcgactgta aagctgttcg
    13261 gcggtgagat cgccgtagaa catcgccacg ccaatgctac agtgcggacg gagttgaata
    13321 cgttcaatcg gcaggcgctc gctcatgata gtgagcactt gctgacctaa ggtgattgcg
    13381 tgccacggtt cctgtacacc gttggcaatg acagcaaagt cataaccgct aatctgcgcg
    13441 aggatcatac gtggcgacag taccgatttg agtttttcca ccagcgtcag cagcagaatt
    13501 tctcgttgcg cctctttcag cactcccgca gtatcacgca gggtttcaca ggtgatgatc
    13561 atcagcgcgg tggtttgttt acgcgcgaca acctgctcca gcatctccat cagcaaggct
    13621 ttgttcggca aatccgacac cgggaagcgc atcgcatttt cgttctgttc ttcataatgg
    13681 cgctgcagca attgctggtt gaggttgtaa ctgcgcacca acataccgat ttcatcatcc
    13741 tgatgcagac gtggtaatgc cagttggtga ccaacaagct cctgggcagg gatggcgtta
    13801 agttcgcgag caatattgcg taacggatgc aaaatcaggc ggttaatgca ccagctaatc
    13861 gccaccgtca atattaacga caaaagtaag taaatggtca ctaacgttga gagggtgctc
    13921 atcacgaact tatacatgcg gaaggaatcc gcctgtagca ccagataggc aattggctgc
    13981 ggatttgccg gacgttcgag cgagtagaca cccagcgaga tttgaaccgg tagctcaaac
    14041 aggcgagtaa ccattaccgg caccggacgc tctggaataa aacttttacg cagcgcctgg
    14101 aactggttag gcagcactac atcggcacgg ctgaccacgc ctgccggttt aatgctggca
    14161 agaatagctt ccgcttcggg aatatcgcct ttcaaaatag ctgaagataa gggttcgcgg
    14221 acagagcgag caatgctttc cagctgcgta gccgtgttat agcgattctg ctggaccaga
    14281 tggaacagca aaacggtgca aaaaataaaa acgaacacca ggacaacggc tgccaccatt
    14341 gccatctgct tgattgttaa cgagcgactt acgcgcaaat tgtctccccc cggaaatccc
    14401 agattgccgc ccgagtatac ccgatcgcag cggcattaag agaggcgcta tctgaaaact
    14461 taccagtcgg cgtaaggtat cagcggctgc ggcggtaaat ccatgtcacc ctgccatccg
    14521 gcggcggaat aacgtacgta gagcaggaaa tggctgggtg cgtaatcttt cgcctgctgg
    14581 atatcaattg ccgtgccgac aaaccagttg gaagtaacac gtcgttcaag taatgcccgc
    14641 gccgtatagc cgaagccctg actgctgccg ccatcgttgg attgccgcgc agcttcttcc
    14701 tgccagtcgg tcgggatcag attcatcagc ggataacgcg gcatggtttt ggtgcgtgaa
    14761 tgcgaccacg agccagatgc ccccagctcc cacgaccagt tttccgtgcg ctcccgccac
    14821 atcaccggta tggcaaacga caggtattcc tgcggactgt agtaaccgcc ctgaccgagt
    14881 gagtagccac tcagatcttt gtcgtaatgc cagatcatgt tgttcaggcc gattgtgacg
    14941 cggcgattgt tctggttaat gaccttatag taatagcccg tcatccagcg cacgcgccgc
    15001 tctgtcctgg ttgtgacctg agaggtacag cccgtaagcg taaacctgct ccgggtcgtt
    15061 cggcttctgc tgcgccagat tgcgcattaa cgtatcggcc tggctgcgtt gtccggcctg
    15121 ccagagatcc tgcgaaagtc ggtaagtaat ccatacgctg ccggggtcca gcgccagtcg
    15181 ttgccgctga agtgctgccg cctgcgccca tttgccctgg ttttccagtg cctctgcctg
    15241 ctgtgccaga cggtcgtttt gcaggctgcg ttcgatatca tcaatgctgc gccgctggct
    15301 ggcagagagc gaggcgataa acgcttcagc tttttctggc gactgctggc ggtaaatatt
    15361 cgccagcccg cgcacggcat tagtgttgcc gctgtccatc cgcagggtct gctgataata
    15421 gcgttcagcg gcggggtaat ctttgcgcgc catcgccaca tcgcccagcc ccagcaccgc
    15481 atagctgtcg gtgttatcga cattacgtgc ctgctggaac aaccgttctg cccggtcagg
    15541 attattggct ttcagcgcag catcaccctg ctggatcgcc agccagtaac ggtttacttt
    15601 caggagactg ttccatttgt cgttgttgct gctgtgcgga tccagtgcga gggctttttc
    15661 cagattcgcc accgcattgg cgcgatcgcc tttctgggag tacgcctggc ccagcgcccc
    15721 cagagcttca ctgtctttca ggtttgcccg caccgcctgt tgtagttcgg gaatggcttt
    15781 acccgccata ccagagtcca ccgccgctaa accttgcgca cgagcgcgga aagcaggatc
    15841 ggccagctgt ttttgctgtt ctgccagttg cgattgcgca gccgccacgc tatcgccatc
    15901 actaaagatc gaaagatatt ttttcagcgc cgacacactg gcatcactga cgggcatgtc
    15961 tttaatctgc ccgtaccaga ttttagaggc cccttcgcgc ccggcgttcg atttcgccat
    16021 ctgttccagg acggcaaaac cttcgtcacg gcgatcgcta ctaaacagca atagcgccag
    16081 attgttttgc aggcccgtat tgcccggtac atccgcattg atgcgtttta actgattaat
    16141 cgcttcgcca cggcgagccg gaattttcgc caccgtactc cagtactcga cagcaatgtc
    16201 accttccggc ggcgcaccgt tgaacagctt gttgtaactc gccacagctt cttccgcatg
    16261 accggtagtc gcctgcaatc ttgcctgttg cagtgcctga cgaccatccg gcgtggaaag
    16321 tagcatcgta gtccgcgacg atttatacgc atttgaactc ggcgctaact gcgacagccg
    16381 atcgagctgt ttttgcgcgc catcaatatc gccctgacgt aacaaagaac ggaaacgggc
    16441 ggcaacgacg tccgggttat tcggatcaat aagttccagc cgatataacg actgttgcac
    16501 cagatcttca cgatgggtcg cttcgcc
//
LOCUS       DAJVTL010000099        16351 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.101, whole genome shotgun sequence.
ACCESSION   DAJVTL010000099 DAJVTL010000000
VERSION     DAJVTL010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16351
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.101"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(49..240)
                     /locus_tag="OQQ26_003065"
     CDS             complement(49..240)
                     /locus_tag="OQQ26_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001352029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858437.1"
                     /translation="MAENEYGLAGLGMGKVKSVNQYRLTPGFGGFTPVSHVTTACRLP
                     CRWRGIRIIQAAFNTFAKV"
     gene            complement(940..1797)
                     /gene="repA"
                     /locus_tag="OQQ26_003066"
     CDS             complement(940..1797)
                     /gene="repA"
                     /locus_tag="OQQ26_003066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858393.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HCS1858438.1"
                     /translation="MTDLQQTYYRQVKNPNPVFTPREGARTLPFCGKLMEKAVGFTSR
                     FDFAIHVAHARSLGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESAAGKLSITRATRALTFLAELGLITYQTEYDPLIGCYIPTDITFTSALFAALDV
                     SEEAVAAARRSRVEWENRQRKKQGLDTLGMDELMAKAWRFVRERFRSYQTELKSRGMK
                     RARARRDADRQRQDIVTLVKRQLTREISEGRFTASREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
     gene            complement(1790..1864)
                     /gene="tap"
                     /locus_tag="OQQ26_003067"
     CDS             complement(1790..1864)
                     /gene="tap"
                     /locus_tag="OQQ26_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001370046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HCS1858439.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            complement(2088..2348)
                     /gene="repA"
                     /locus_tag="OQQ26_003068"
     CDS             complement(2088..2348)
                     /gene="repA"
                     /locus_tag="OQQ26_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HCS1858440.1"
                     /translation="MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEI
                     KVFVKNPLKDLMVEYCEREGITQAQFVEKIIKDELQRLDILK"
     gene            complement(2588..3178)
                     /locus_tag="OQQ26_003069"
     CDS             complement(2588..3178)
                     /locus_tag="OQQ26_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HCS1858441.1"
                     /translation="MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGD
                     AERILSSGEYWQRQKTLLTEREVSFMKGLFRIVDMKRWYLCPQVRGADIVQLNGNIRP
                     RSRQWWQLFRMVSQWHVDVVIVELRSFSIVAAVELDDASHLRPERRRRDILLEEVLRQ
                     AGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS"
     gene            complement(3217..3426)
                     /gene="hha"
                     /locus_tag="OQQ26_003070"
     CDS             complement(3217..3426)
                     /gene="hha"
                     /locus_tag="OQQ26_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HCS1858442.1"
                     /translation="MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLSNSERESFNSAA
                     DHRLAELITGKLYDRIPKEIWKYVR"
     gene            complement(3472..3933)
                     /locus_tag="OQQ26_003071"
     CDS             complement(3472..3933)
                     /locus_tag="OQQ26_003071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HCS1858443.1"
                     /translation="MRKYIPLVLFIFSWPVLSADIHGRVVRVLDGDTIEVMDSLKAVR
                     IRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNIN
                     QFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWRHRK"
     gene            complement(4177..4389)
                     /locus_tag="OQQ26_003072"
     CDS             complement(4177..4389)
                     /locus_tag="OQQ26_003072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HCS1858444.1"
                     /translation="MNGFRNSSRNGQVWRYQRAGGRAVILEVSGRWMEAAEAWRRAAC
                     VAPRTDWQQFARKRAEHCHRRCRGRV"
     gene            complement(4520..5080)
                     /locus_tag="OQQ26_003073"
     CDS             complement(4520..5080)
                     /locus_tag="OQQ26_003073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HCS1858445.1"
                     /translation="MTEQKRPVLTLKRKTEGTAPVRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELAAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRD
                     VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEA
                     YAGARLAKIRRQNRIKAELQAVLDEK"
     gene            complement(5135..5881)
                     /gene="traX"
                     /locus_tag="OQQ26_003074"
     CDS             complement(5135..5881)
                     /gene="traX"
                     /locus_tag="OQQ26_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858383.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer pilus acetylase TraX"
                     /protein_id="HCS1858446.1"
                     /translation="MTTDNTNTTRNDSLAARTDAWLQSFLVWSPGQRDIIKTVALVLM
                     VLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHTHIRQPAINRLWGWGIIAQF
                     AYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAG
                     LLMLAVSNRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVLC
                     AGKSLPRFWPGDFFPTFYACHLAVLGVLAL"
     gene            complement(5901..11171)
                     /gene="traI"
                     /locus_tag="OQQ26_003075"
     CDS             complement(5901..11171)
                     /gene="traI"
                     /locus_tag="OQQ26_003075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001463032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HCS1858447.1"
                     /translation="MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQ
                     GSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRL
                     IEAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHA
                     VVTNVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV
                     GKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAE
                     WMQTLKETGFDIRAYRDAAEQRAYTRTQTPGPASQDGPDVQQAVTQAIAGLSERKVQF
                     MYTDLLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHMLDELSV
                     RALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA
                     ELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVD
                     QGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQR
                     PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL
                     GHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVTERVTAQSHSLT
                     LRNAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV
                     SEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMD
                     NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQ
                     KAGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTGFADLGGEINAQIKR
                     GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSG
                     QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV
                     GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA
                     AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINR
                     DVERALSGLERVKPSQVPRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV
                     PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGQVQVMVP
                     VLNTANIRDGELRRLSTWENNPDALALVDNVYHRIAGISKDDGLITLQDAEGNTRLIS
                     PREAVAEGVTLYTPDTIRVGTGDRIRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ
                     QTRVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL
                     SRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDV
                     AAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWRNPLTTDDGN
                     GLRGFSGEGRVKGCGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGE
                     GRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEI
                     VRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPESVLREPQRVREAVREV
                     ARENLLQERLQQMERDMVRDLQKEKTPGGD"
     gene            11253..11480
                     /gene="vapB"
                     /locus_tag="OQQ26_003076"
     CDS             11253..11480
                     /gene="vapB"
                     /locus_tag="OQQ26_003076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HCS1858448.1"
                     /translation="METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAG
                     ETWDEWFDGHSVSADFMDNREQPGMQERESF"
     gene            11480..11878
                     /gene="vapC"
                     /locus_tag="OQQ26_003077"
     CDS             11480..11878
                     /gene="vapC"
                     /locus_tag="OQQ26_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HCS1858449.1"
                     /translation="MLKFMLDTNICIFTIKNKPASVRERFNLNQRRMCISSVTLMELI
                     YGAEKSQMPERNLAVIEGFVSRIDVLDYDAAAATHTGQIRAELARQGRPVGPFDQMIA
                     GHARSRGLIIVTNNTREFERVGGLRTEDWS"
     gene            complement(11887..14057)
                     /gene="traD"
                     /locus_tag="OQQ26_003078"
                     /pseudo
     CDS             complement(11887..14057)
                     /gene="traD"
                     /locus_tag="OQQ26_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001577029.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
     gene            complement(14339..14818)
                     /locus_tag="OQQ26_003079"
     CDS             complement(14339..14818)
                     /locus_tag="OQQ26_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001473214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858450.1"
                     /translation="MYNIHNENYNYITRTGGSDTYFLYTPALFVDKQVAAPSVNVEKL
                     CAISGGQRRIKKFTSDTFIESGYKVAKAFRDMGLYAHFGAYEAFRDSYQSFEKQKIAY
                     RFQTEKLDEYVNKGYFFDDFSCIVNGKEIWSLSIEPVAVDQDSSGVDQIWMLMTINS"
     gene            complement(15022..15723)
                     /locus_tag="OQQ26_003080"
     CDS             complement(15022..15723)
                     /locus_tag="OQQ26_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000850426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement resistance protein TraT"
                     /protein_id="HCS1858451.1"
                     /translation="MVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVF
                     LQIKNTSDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKADKMELRESQGW
                     LNRGYEGAAVGAALGAGITGYNSSSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDV
                     QIAERTKATVTTDNVAALRQGTSGAKIQTSTETGNQYKYQTRVVSNANKVNLKFEEAK
                     PVLEDQLAKSIANIL"
     gene            complement(15737..>16351)
                     /locus_tag="OQQ26_003081"
     CDS             complement(15737..>16351)
                     /locus_tag="OQQ26_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS2 family transposase"
                     /protein_id="HCS1858452.1"
                     /translation="QNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNG
                     ERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDN
                     GSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAA
                     KNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI"
BASE COUNT         3588 a         4764 c         3947 g         4052 t
ORIGIN      
        1 aagtcttaac gatatccctg aaacgaccac ttaacaagtc tttattactc acacttttgc
       61 aaatgtatta aatgctgctt gtattattct gatgccgcgc cagcggcatg gaaggcggca
      121 cgctgtggtt acatgtgata ccggcgtaaa accgccgaag cccggcgtca gccggtactg
      181 attgacagat ttcaccttac ccatccccag tcctgctaag ccatactcgt tttcagccat
      241 gatagagctt ctgtgcgcgg tcggagtggt tccgacgagg gtttacccga agtcggggcg
      301 tatctccgcg ttagcgggcc gtgagggccg cttacgagcg tgtactagat acgtccagcc
      361 agaagactga cagcgatgat gatgtagtta caacattcat aattaaaagc gactctgttc
      421 ccgccctttg ggcgggggcg gcggcgcttt ttagttatga ggaggggcgt tgtggtttca
      481 gttctgcgtc ggacttgggt tttttagcgg tttatgtttg catgttgtaa ctaaaccggc
      541 ttcggttggg gctcgccgct tgcggtggaa ggtgcatatc tgtctgtcca caggacaggc
      601 agtgaacagg ttttcttttt aaatgaatgt aattaagtag tttaaaggag atataaacag
      661 gtgtttaaaa gatacattgc accctgtagg gctgacggct ggcgctttat gacgtaaacg
      721 gttgtaacct tatggtgaag tcccttgcag tttaatgtgg ataagcaaaa ttccccgtct
      781 gtgaggcgtg ttttgtatca aaaacagggg ggaccggatg caccagaagg tggatgatga
      841 ggttgttttt tgtatgtagc gctgattttt tgtgcactgg cgggcttcag gcgtgcgaat
      901 gcctccggcg cgtgccggat tattctgagg aggtcacttt cagggggaag ctgtggccag
      961 ccggctgtaa ttacggttac gtgacagaat catgcgctcc ttcacacgac gctccacttc
     1021 acgttttacc gcctcacgac tggcagtgaa gcgcccttcc gagatttcac gcgtcagttg
     1081 ccgtttcacc agggtgacaa tatcctgacg ctgcctgtcc gcatcacgac gcgcacgggc
     1141 acgcttcatt ccacgggact taagctctgt ctggtaactg cggaaacgct cacgaacaaa
     1201 acgccaggct ttcgccatca gttcatccat acccagggta tccagcccct gctttttgcg
     1261 ctgtctgttt tcccattcca cacgactgcg gcgcgcggcg gccactgcct cctctgatac
     1321 atcgagggca gcaaacagtg cagatgtgaa cgtgatatcg gtcggaatgt agcacccgat
     1381 aagcgggtca tattccgtct ggtaggtaat cagtcccagc tctgcaagga atgtcagggc
     1441 ccgggtggcc cgggtgatgg agagttttcc ggcagcagac tccgtcgcca gtccgcactc
     1501 aatggccagc gtggtgatgg aacactggac gcggttggcc agtgggtcat agtgaaaaca
     1561 cagcccctgc agcagcgcat caatggcccg gcgacgtagt accggtggca tgcgccgacg
     1621 cagaccaagc gaacgggcat gtgccacatg aatggcgaaa tcaaaacggg aggtgaagcc
     1681 caccgccttt tccatcagtt tcccgcagaa cggaagcgtc cgggcacctt cacggggtgt
     1741 gaacaccgga ttcgggttct ttacctggcg gtaataagtt tgttgaagat cagtcacacc
     1801 atcctgcact tacaatgcgc agaaggagcg agcacagaaa gaagtcttga acttttccgg
     1861 gcatataact atactccccg catagcttga ttgttggcta tacggtttaa gtgggccccg
     1921 gtaatctttc tgactcgcca aagttaaaga agattatcgg ggtttttgct tttctggctc
     1981 ctgtacatcc acatcagaac cagttccctg ccaccttatg gcgtggccag ccataaaatt
     2041 ccttaaacga tcagtaatct agcatgctac gccacaaagt aaagtcttta ctttagtata
     2101 tccagtctct gcagttcatc tttgatgatt ttctcaacga actgagcctg tgttatcccc
     2161 tctctctcgc agtactcaac catgagatct ttcaggggat ttttgacaaa aacttttatc
     2221 tctttgtgtg taagacgttt tcttgcaaca gcggccattt gtttctcaga gtcagtcata
     2281 ggcttacctc tgcgcacaaa ccgcttttga ctcaatgagg aagtcactgc attttctgtc
     2341 tgcgacatct cgcctcctca atactcaaac agggatcgtt tcgcagagga tactacagtt
     2401 ttttgaaatc agcgacttga gaattgtggc gaagatctgt gttggcgcac aaatcaacgg
     2461 ggattactgt cgtttaatgt gatttaaact gtgaaatagt atggttttca gttatggaaa
     2521 cgccgggagc gaggaaaact tgctttttcc cgtttccggg gttggacaac tgagcaacgc
     2581 gaaggcgtca gctacgatgt tccggtgact gctgatcagc ccctgttgta ttcagccatt
     2641 ctccggtcat ctgcagcagt tttctggcat cgtggcttct gagcaacgga ataccagcct
     2701 gcctcagaac ctcttccaga agaatatccc ggcgtctgcg ttccggtcgt aaatggctgg
     2761 catcatccag ctctactgct gcaacaatac tgaacgaacg cagctcaacg ataaccacat
     2821 caacatgcca ctgagacacc atcctgaata actgccacca ctggcgtgat cgtggccgga
     2881 tattcccgtt cagctggacg atatccgcgc cccgtacctg cggacacaga taccaccgct
     2941 tcatatccac aattctgaac agtcctttca taaaactgac ttccctttct gtcagcagcg
     3001 tcttctgacg ttgccagtat tcaccgctgg acagtattcg ctctgcatca ccggtccgta
     3061 tacctgccgc atgcaattgc atcagcaaag gagaatgctg atttacactt ctgaggataa
     3121 tccggataag tagcgctgca ataatcagaa caatgagaat aaaaataatc aacttcatta
     3181 tttatctgct cctggcaatt aattattgct gaattattac cttacatatt tccatatctc
     3241 ttttggtatc ctgtcatata actttccggt gattaattcc gctagccggt ggtctgctgc
     3301 tgaattaaat gattcacgtt cactgtttga taaactgtct ctgtttttat gaataatttt
     3361 ttccagcgta ttgactgatg aacatcgccg taactgatac agccattcct gttttgtttt
     3421 tgccattttt attcccgctg agaacagatg aatgatagga ttgccatcgc tttatttacg
     3481 gtgcctccat atccaggggg gaaccggatc agcatctgac cagagcccac gtttttgttg
     3541 tctggcttcg ttctgaagga caggtagcac gggatctgtg ttgtactgct catataccca
     3601 ggcagccccg gcccggacca taaactgatt aatattcatt ccgtctggtg cataaacctg
     3661 cccgagaata cgaccataac gatctcgctg aaaatatgtg acggtaaccg tttttcctgc
     3721 gaccagtgat ttcatcatgt ctgttgacca ccggccataa tcctgtttct tttccggtgc
     3781 atcaatattt accagcctga tccgcaccgc cttcagtgag tccatgacct cgatggtatc
     3841 accgtccagt acacgaacaa cccgtccatg aatatctgca gacaataccg gccatgaaaa
     3901 gataaataat accagtggaa tatatttcct catgttattc tccatatcag ataaatggca
     3961 cctgtatttc agcccccctg aatagtgcag cacacattga ataacacctt attttgtgaa
     4021 attaatcaca aaatataaaa aatcgactta atgcggaaaa gactctgtgc tactcagaac
     4081 tgtccggtca tactgcccga ccggatatta agaagcaaat ctcataaact cctttcagcc
     4141 ttctgactcc tggagtaatg aaggctgctt ttttcgttac acccttcccc tgcagcgccg
     4201 gtggcagtgt tcagcccttt tccgggcaaa ctgctgccag tctgtcctag gcgcaacaca
     4261 ggcagcccgt cgccatgctt ctgccgcttc catccagcgt ccactgactt ccagaataac
     4321 ggcccgcccg ccggcacgct ggtaacgcca gacctggccg ttccgtgaac tgtttctgaa
     4381 tccattcatt ttcttgtccc cctttagttg tcagtattat tgtgataaat aattcagtgg
     4441 actggcttcc tttcggaagc ggaagttatt tccttttaag ccttatttcc ctgcctcctc
     4501 tctctggggg aggctttttt tatttctcat caagcacggc ctgaagttct gcctttatcc
     4561 ggttctggcg acgaattttc gccagacgcg ctcccgcata cgcttcctcc tcctgagaaa
     4621 tatgctccgt cacataccct tccgtgtcat accggcaggc accggctttc atggcacaca
     4681 gatagctttc tgaacgggtg atggccttca gcgccctgcg cagtttttta tgcgagagcg
     4741 ggatattccg ctgcgccacg tcttccagta acacgtcccg gataccgcag gccagaagcc
     4801 ggggcgtgtc accgtcaaat aatcccggcc accagggctt cagggtattc acagcctcat
     4861 ccagcgtggg caggttcaga taaatggaca gcgcctgtct ggcctgcgct ttttttgccg
     4921 ccagctctgc ttcacgggcc gctttctcgg ccagcttctg ctttttcacc ttccactttg
     4981 gtggcgtggt gacattgatg atggttttcc ggctgcggac aggcgctgtt ccctctgtct
     5041 tccgcttcag tgtcagtacc ggtcgcttct gctctgtcat gctgtgttct gcctctgacg
     5101 aatcatcctc ttgcggccaa agataccaca cccgtcacag cgccagaacg cccagcacag
     5161 ccagatgaca ggcatagaac gtcgggaaaa agtctccggg ccagaaacgg ggtaatgatt
     5221 ttccggcaca caacaccaga ccaacggtca gcaccgtcat cacaagaccg gccaccgccg
     5281 ctgcatcact ggtggcaagg ttaagcgccg gaataacagc cagcaggcag gcgaccagcg
     5341 ccagacgttc cgctctgtct tccgcccggt acagccggtt gctgactgcc agcatcagca
     5401 acccggcaat accgtaactg gtgccggaca aaggccccca cagggccatc aggagtatgg
     5461 ccgctgctgt acgccaccca ctgcgcgttt cacaccacgt cagcacctgt gccgccactg
     5521 caaaggcaaa caggatattc ccctcatacc agggaaagcc tgccagataa tatgcgaact
     5581 gggcaataat tccccatccc cacagccggt taatggccgg ttgccggata tgcgtatgac
     5641 gggacagatt cagcccccac accagggcaa aaagcggaaa ggctcctcgc ccggccagaa
     5701 acatccattc ctgcttcaac tggaatatca gattgatgtg gtccagtacc atcagcacca
     5761 gtgccaccgt tttgatgata tcccgctgtc cgggtgacca gaccagaaat gactgcaacc
     5821 aggcatcggt ccgtgcagcc agtgaatcgt tacgtgtcgt gttcgtgtta tccgttgtca
     5881 tcagtgtttg tcttcctgta tcagtctccg cccggggttt tctctttctg caggtcacga
     5941 accatatccc gctccatctg ctgcagacgc tcctgcagca aattttcccg ggcaacttcc
     6001 cggaccgctt cccgcacccg ttgtggttca cgcagtacac tctccggcag cgcggcttcc
     6061 cgttcagtta tggcagcccg gtcacgctcc tgcccggcaa tttccctgac agcctgctct
     6121 gttttgccgt ccggcaggtc aggtttgttc tctgccattt tacggacaat ttcatctgcg
     6181 cgacgttccg tttcacggcg gatggcctct tcagcctgcc gctgtgccag tacctctgcc
     6241 gtgaccggtt cgccatttcc ggctcccggc tggacgctgt tgtccgggat atccccccac
     6301 acgcggccac cggtgatggc accgggattc cacggacggc cttcaccggc gattcttacc
     6361 accacaccac tgtcaggatt atcacgggca atccggacgc catcctgcat attatcagcc
     6421 agcaggcttt ctccgttacg gctgccctgc agggccacga actgcgcatc cccgcagcct
     6481 tttacccgac cttcaccgct gaatccccgc agcccgtttc cgtcatccgt ggtcagcggg
     6541 ttccgccaga taccggcgga cttgccgtta cggtcaaacg ccggcagtgc cacatacggt
     6601 tgcggatatt tacgtcccgg agcaataaac cgtgcaggac tgtctccccc ggccagcccc
     6661 gcctgacgga gaacggcacg gcctgccgcc acgtcccgca gctcccgcgc cgtactgaac
     6721 agccgctctg cattcatgac ctcccggtcc ggtttcggct caaacacatc gtgggcagtt
     6781 cctttctgta cggcattgtt gatggcatcc gtccagccct gacggttatc ggtgtacacc
     6841 tgcacatgct gcttcatacg cgacagggcc acgtaggctg actcaaagcc ggccatcagt
     6901 ttccggttac cttccgtgcc ttcaagcgcg atggcaaagg tttcactcgc cccctgtgca
     6961 ccgtgggcgg tgatggcata ggccaggtca atatgttgct ctgcccgctc ctgaccgggg
     7021 cgaatcacac gggtctgctg accgtcagaa agtgtgacac tgtcaccgga aaccgctgtc
     7081 accgtccaga cgctgttggc cacataaccg cgctcccggt cactcttcgt gaagcgtatc
     7141 ctgtcaccgg tccccacccg gatggtgtcc ggggtgtaca gcgtgacgcc ttcagccacc
     7201 gcctcccggg gcgaaatcag ccgcgtgtta ccttccgcat cctgcagggt tatcagcccg
     7261 tcatccttgc tgataccggc aatccggtga tacacattat ccaccagggc aagggcatcc
     7321 gggttattct cccaggtgga gagacgacgt agctccccgt cgcgtatatt cgctgtgttc
     7381 aggacaggca ccatgacctg cacctgcccc agttctccgg ccttttcccg tgcatcatga
     7441 atcatgctgt tcagtacgcg ccggtcctca ttcaggtgcg tgacaatcag cgtctgctcc
     7501 cgtgcttccg gtgtcctgcc ggtatagtcg cggacaatgg cttcatacag tgtcatgggg
     7561 acatccggaa aagcctcgcc tttcagcatc gccttctgct gcgcttctgc cagtttcgct
     7621 tcctggctgt gactgaactc cgtcacggag tgctccggtg cccatgcgcc ctccagacgt
     7681 ggcacctgag acggtttcac acgctcaagc ccggacagcg ccctttccac atcccggtta
     7741 atcaggctgt ataccgcctc ccgcagttcc ggcgtctgac gcacaatctc cttcatgatg
     7801 accacatcgg cagcactgcg cgtctgctgg agacggaaag gctgaccggg cgcgatggcc
     7861 tgcagctggt ccgtgtcacc gctggccaca gcccgaccgc caccggccgc aatcagggcg
     7921 tatgcccgtg ccatgtcggt attgcccacc atagagctct catcgagaag gaacagcgtg
     7981 ttgctgaaat ccggcgtttc tccgctgcgc tgctgcagct gcgtgtcatg cagaaaggac
     8041 gccagtgtct gtgcatccac gccggcgctg cgcatctccc cgaccgcacg gtgtgtgggc
     8101 cccagcccca cgacacgggg acgttcactc tccggcagca tgttcacggc tgacatcacc
     8161 gcccggaact gtgtggtctt acccacaccg gcatagccct gcaccaccgt gaaacggtcg
     8221 gacgtttcca gtatcatacg ggtggcggcg cgctgtcctg atgtcagttt ctccatgagt
     8281 tcgccaggta ctctctccat cagcggcgtg accgcctcct taccttcgag aatatggcga
     8341 agaatgctct tttctgcctc atacgacgca cgggaaacca gcaggcctgt gccatagcct
     8401 tttgccacat ccacatacag taaatcaccc cgttttatct gcgcattgat ttcccctccc
     8461 aggtcagcaa aaccggttcc ttctgcagca aacgacttcg cctctgtcag caggtccacc
     8521 atgctgaagg ccaggttttt actttccagc acaggaaggg ccagatgaat ggcctgctgt
     8581 gccggcgtgt gaagcccggc tttctgcaga ctgatagcgg tttccagcaa tgtctcaccg
     8641 gcacgcgcct ttatctgctc agaaaccacc gtaaaggagg gatggcgggc aagtttttcc
     8701 gcagtacggg tttcatccag tgaggaatac agccggacat cacgaccact gcgggccaga
     8761 ccgttcaggg tggcattgtc cattgccatc tgtgtgacgg aggcaaaaac cgtcgcactg
     8821 tcgctgacgg aatgcccggg cgtttccacc cagccgttct ccagcttcag tgccgtgaac
     8881 ggtgaatcgc tcacaggcag ggtggccggt tcagcccgtc ccggcacaac aaccgtcatc
     8941 gcatcttcac tgacggatgc cacctgcagg cggtcaccgc cggagacgcg gagtccggga
     9001 attttccctg tcaccctcag acgctcaccg tctgccaccg gcattttttc cggccggaac
     9061 agcgaccagc tgctgtccag ggaagaaata cgcaccacct gcgtttcgcc ctgcgcattc
     9121 cgcagggtca ggctgtgact ctgcgccgtc acacgttctg tcacatagcg gtcatgactg
     9181 cgtgtctccg ggttccactg ctccatcacc attcccgggc ggtacatatc ccgcagataa
     9241 cggctccggc tgtccagcca gaccggtgac agggcggtca tggttacctc cgggtgtccg
     9301 agcacgccct gtgttttcag ctcactgcga atggcctgtg tcagtatggc ctgttcccgt
     9361 actccgctga cctgtgccac gctctcttct ccggctttca cgctggccgc aaaatctccg
     9421 gccagccggg catagcggac attacggtcc ggttcactga tgatggtggc cggtcgctgt
     9481 tctcccccct gccagcgata tgtgttcacc ccggcatcct tcatggccat cagtgcactg
     9541 cctgtaccgg ttcgctgccc gctgtcggtt atcaggacct gtacgttatg acgtgcggca
     9601 ccatccagca gggttaacgt ctctttcagg gagagttttt cgccctggtc gacgataacg
     9661 gtactgcccg gcgtgaaggc catgccttcc agcaactgac gacgtccggt tatcagttca
     9721 ccggacagcc gttcatcctg cttcaggttc atctgcgagc gacggtcagc agcgataatc
     9781 tgcacctccc gcccctgctc ccgggccatc atgaccagtt cagccacccg ctcacgctgc
     9841 ccggctgcac cgccctgccc ggacacaatg gccagcgacg gacggtcctg tgccagaaca
     9901 ctgacggcat cgctgtaacc ggccgtccgg gggacacttt tctccggatg tacggtcacc
     9961 cggttctgtt tcatgatgtc acgactgagt gcccggactg acagctcatc gagcatatga
    10021 atcccggacg tgaacagccc cttctcacga tcgaggggga taagctgctc acggctgatg
    10081 gcctcatcga taccggcgcg tgcccgttca atcacaccat tttccggcgg cagtatgccg
    10141 accgtcctgg ccagcaggtc cgtatacata aactgcactt tgcgttcact taatccggca
    10201 atggcctgtg tcaccgcctg ctgcacatcc ggcccgtcct gtgaagcggg tccgggtgtc
    10261 tgcgtgcggg tatatgcccg ttgttccgct gcgtcacgat atgcccggat gtcgaacccg
    10321 gtttccttca gcgtctgcat ccactcggcc attctgactt caggatcgac gtgctgtttg
    10381 gatttacgcg tatccagcgc cgccacatcc cgggatttca gcgaggcgtc ttccccgacg
    10441 gcctcccgga tagtctgtga gcgtccggaa aaggcctcca ccggtacacc cggcatttcc
    10501 cacataccgt gcttaccgac cacttcagtt tcatagccca gcgcctcaac ctgctctttc
    10561 agtttttccc ggtagagcct gccaaaggca atctgattag cgtacacatt ctcaatgaac
    10621 cccgttttcc ccactttgtc actgctcagt gtcttccatt cgccgttatg ctgcgtaaca
    10681 ttagtcacca ccgcatgcgt gtgtaactgt ggttcctgat cgcgactggt gtcgtggtta
    10741 aacagtgcca tcaccagatt accggtcagc accgtttctg actgtccgtc cgtcatcacc
    10801 cgtgtggagg ccagtgcctc cacctgacgg acagcaaaat ccacggcctg gttatgtgct
    10861 tcaataagac gtttgtcccc cccgagcatg gccatcatgg agacactttt gggagcggag
    10921 aaggtcaggt cgtagccggg acgatgcctg ttactgccat cctgcatgcg gcttaaatcc
    10981 gccccgtccg gcagcctgcc ctccagaagg cgggtaaaga catccttatc gacactgccc
    11041 tgcagcccca gttgttcagc cccctggccg gcccagcgtt ctcccatgct gcccagcaca
    11101 tagtaattat ccttgtcggt ataataatta ccggcacttc cggccgatct gacctgcgcg
    11161 atactcatca taaacgtata tccctttgac atatcccggt atcaatccca caatagatat
    11221 acacaagaca tatccacata aggaggcaaa taatggaaac caccgtattt ctcagcaacc
    11281 gcagccaggc ggtcagactg ccaaaagcgg ttgcattgcc ggaaaacgta aaacgcgttg
    11341 aagtgattgc tgtcggacga accagaatca ttacgccagc cggagagaca tgggacgaat
    11401 ggttcgacgg acacagcgtc agcgccgatt ttatggataa cagggaacag cccggcatgc
    11461 aggaaaggga gtcattctga tgctgaagtt tatgctcgat accaacatct gcatttttac
    11521 gataaagaac aaacccgcca gcgtcaggga gcgttttaac ctgaaccaga ggagaatgtg
    11581 tatcagttcg gtcaccctga tggagctgat atatggtgca gaaaaaagcc agatgcctga
    11641 acgtaatctc gctgtgatcg agggatttgt ttcccgcatt gatgttctgg attacgacgc
    11701 tgctgcagcc acacacaccg gccagataag agcagaactt gcccgtcagg gacgccctgt
    11761 cgggccattt gatcaaatga tcgcaggtca tgcccgcagt cgggggctga ttattgtgac
    11821 taataacacc cgggaatttg aacgtgtggg cggcctgaga actgaagact ggagctgacc
    11881 tgttcatcag aaatcatctc ccggctcaac atcctccccg cgttcccggt gcacattgat
    11941 gttcacctct tcacgacgct gcatctgctg ccaggtgtcc ggatgatttt cctgctgcca
    12001 tgcctcataa gcggccatat ccaccacttc accggattca ctgatcccgg gtggcagttg
    12061 ctgttccatc tcttcttccg gtttcatttt cagctcctgc tcgatccccc ctgccggaac
    12121 attcacacct gaatctgact tcttatcgtt gatgacagga gacaccggct gttgcggctg
    12181 ttgcggctgt tgcggctgtt cagcctgagt cacgtcttct ccggaaacaa cctccgggac
    12241 atccggttcg aagaggctgg ccatctgacg accttctgct tcccttgcgg caagtacggc
    12301 actcagacgg ttctccattt ccgggttgat gtcacgcgga ataaactccg gagcgacctt
    12361 cggacgttcc tgatatttca gtgagagttt gactgccgga tacggtccgg gcagggtgac
    12421 atagcaggtc agatccggca gggactgaat gtcggaataa ctgaccagcg tctggcgctc
    12481 catatcctta ccggtcgata ccccgtcacg taccggatca gcaccgtagg aatactgttc
    12541 gctggctttc aggtgctctt tctcaccaat ttcaccggca gcgaactccg caatcttatg
    12601 gctgggagaa cggaaaaagg cacgggtgtt catgacgtca aacagcgtgg cagccgcttt
    12661 ctcaccgtag atatcttcca actgggcata ggactggata ccaaacacat aacagccacc
    12721 gaacttacgg gcttccggca ggatctccac caggtccggc agtttgtgta atgtgggtaa
    12781 ctcatcacag aagaaccaca cacgacgatt acggttttct cccattgcca gcagaccacg
    12841 aatggcaatg gacagccaca tggagatcac cggcttcagg gaggcatgag tgtcggcatt
    12901 cgacgagata aacagccagc cgtttttctg atcctcccgg acaccacgca tccagtcacg
    12961 gatggtgaag ggctcaccgt tatgctcaat cccctgcagg taacggatgg ctttcacata
    13021 gttggtcagc acagcacgga tggagatggc cgttttctcg attttctctt ccaccaggtt
    13081 ggccgccggt gaattacgca ggtaggtacg cagtttttca attttgatgg aaagcagtgt
    13141 gtccaccagt ttgctgtagc tgcggttggg gtcattacgc atcagatacg ccgcttccgc
    13201 aaaaatggta cgtcctgaac cctgccagaa cgggtcctct tttgtgccca tcgggatcag
    13261 agtatttgcg gtattatcaa aatccggctg tgtcaggcac tccttccaca aatcccaggc
    13321 ggcacagcgt gcatccagcg gattcaggat cttatcgatt gagggatcat agtaactttt
    13381 aacaaattcc cctgaacggt cataaatcac caccatatca ccacgctgac ggcgtagttg
    13441 gccagacgac ggataacctc cgacttaccg gccccgaccg tgccgtgcag acagaagttc
    13501 tggatttcgg aatcccggat aatcggcaga tcgccaatcc ggatatcgga gtccctgccg
    13561 tcttttttca gcatccgggc aacgtctttc ggattgtctg tcagttgacg accacctgtg
    13621 acttcatttt cgctctgttg tttaccctga cgccccagaa tccaggagac aacaaagaag
    13681 gtaatcaggc aaataaccag tgccacaact gtggccagaa cgaatgcaga ccataactgc
    13741 tcaccgcacc agatcatata tttatcatgc agtacctgag cagcgttcat ccggaaggtt
    13801 ttgccgtaat actgaatctc atataccggc tgagacttga ttaaatcccg catgccttcc
    13861 agcgtggtac accaccagta aatacagcca ttcacaaacg tctgccagct tatttttacc
    13921 cataaaacca gaccaacgag tatccagaaa aaaataaaca ggcagtaaag cataatattg
    13981 gcgatctggc tgaacatgcg gatacgcatg gacgcaatct gaccgccctg ggtcatatcc
    14041 tttgcgttaa aactcatgat gatattccga agaaagaaag tcagtcggac tgattattaa
    14101 tgatgaaaag attaataacc gttaaattcc ggcttcgccg gcaacacttc acggtcgcac
    14161 aaagaatttg cacaaccgct cagtgttttc atatttattt cggaaacgcc ggggagaaat
    14221 aaaatttatt ttatttcttt ccggggttgg acaacgagca aagcgaggcg tcagtcagga
    14281 ggccagcagg gctggcccgg ataattttct tgacgtcatt aaagttaata aataaagatc
    14341 agctatttat cgtcataagc atccatattt gatcaacacc tgatgaatcc tgatcaacag
    14401 caactggctc aattgaaagt gaccatattt ctttaccatt gacaatacag gaaaagtcat
    14461 caaagaaata acctttattt acatactcat ccagtttttc tgtttgaaat ctatacgcaa
    14521 tcttttgttt ttcaaaactc tgataagaat ccctgaatgc ttcatatgct ccgaaatgag
    14581 catacaatcc catatcacga aaggctttag caactttata gccggattca ataaaggtat
    14641 cagaggtgaa tttcttaatt cgtctctgcc ctccacttat agcacataat ttttccacat
    14701 tcactgatgg tgccgctact tgtttatcaa caaacagagc cggagtatat aggaaatacg
    14761 tatcagaacc gccagtacgg gtgatatagt tataattctc attatgaatg ttatacatta
    14821 tctggtcgga caaaaattct cttatatgtt tattcttata tttatataaa gttccttcag
    14881 atacttgtgt acttatgcat ccctgaatga ggaaacaaat taataacact atgccttttc
    14941 tgattaacac gactgccccc tttattccat aatagggatt ttatatgaga ctggtacagc
    15001 tttatccagt ctcatcctaa attacaatat attagcaatt gatttggcca gctggtcttc
    15061 gagaaccggt ttcgcttctt caaatttcag gtttaccttg ttcgcatttg agaccacacg
    15121 ggtctgatat ttatactggt tacctgtttc agtactggtc tgaattttcg cacctgatgt
    15181 gccctgacgc agggcggcaa cattatccgt tgtcaccgtt gccttagtac gctctgcaat
    15241 ctgcacatcc gtgatcatgg tatagttcac atcttccacc atcgcatctg cagccatacc
    15301 caccagaccg gcagcaaggc ccacaccgag tgtggcaccg gcagaactgg aattatatcc
    15361 ggtgataccg gcacctaacg ctgcaccaac tgctgcgcct tcataaccac ggttcagcca
    15421 tccctgagac tcccgcagtt ccatcttatc ggccttcagc acattcgcct gaatccagta
    15481 gtaggcttta tccggagaag tcaccacctg ataccctttt gctttcacag catcagcaat
    15541 tttgccctgc agcccactca tgtctttatc agacgtgttt ttgatctgca gaaataccgt
    15601 gcgttcgctg gcgggttcaa gccagatggt ctcactcatc tgagtcttca cctcaaggtt
    15661 acgcttcttg attgctgtgc tcatcgcacc acaccctgaa agggccagag tggaactgac
    15721 cagtgtggat ttgcccctat atttccagac atctgttatc acttaaccca ttacaagccc
    15781 gctgccgcag atattcccgt ggcgagcgat aacccagcgc actatgcgga tgccattcgt
    15841 tataatgctc gaacgcctct gcaaggttct ttgctgccgt taacccgtct ggtttgggca
    15901 tgatactgat gtagtcacgc tttatcgttt tcacgaagct ctctgctatt ccgttactct
    15961 ccggactccg caccgccgtg ttcttcggtt caagtcccaa catccgggcg aactggcgtg
    16021 tttcattagc ccggtagcat gaaccattat ccgtcagcca ctccactgga gacgacggaa
    16081 gatcgttgcc gaagcggcgt tccaccgctc ccagcatgac gtcctgtact gtttcactgt
    16141 tgaagccgcc ggtagtcacc gcccagtgca gtgcctcacg atcacagcag tccagcgcga
    16201 acgtgacacg cagtctctct ccgttatcac agcagaactc gaacccgtca gagcaccatc
    16261 gctgattgct ttctttcacg gccactctgc ctgtatgtgc ccgtttcgat ggcggtacag
    16321 caggttttcg ctcaagcaac agcgcattct g
//
LOCUS       DAJVTL010000100        16128 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.102, whole genome shotgun sequence.
ACCESSION   DAJVTL010000100 DAJVTL010000000
VERSION     DAJVTL010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16128
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.102"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            34..1038
                     /locus_tag="OQQ26_003082"
     CDS             34..1038
                     /locus_tag="OQQ26_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1858453.1"
                     /translation="MSIKKLEDGRYLLDIRPNGRKGKRVRKVFDKKSVAVATERYIMA
                     NAEKREYIQGYRDRRTLNDLLELWWMYHGQHRRKAEEDRKQLRNIINELGADMQAVDL
                     DKLKIIAWRSQKIAEGLKPSSANRYMNRLSGMFTVLKKIGLWDAEHPVRGISILYVSP
                     REMAFLSQKEVALLLDTLEGDYWRVALLCLSTGARWSEACKLRGEQIVHNRVTFLETK
                     NGRKRTVPISQAVCEAIKTRETGGLFEVKYREFCLALKRVKPDLPKGQAAHVLRHTFA
                     SHFVMNGGNIIALQKILGHATIQQTMAYAHFAPDYLQDAVALNPLKGGVSVHAVSTGD
                     "
     gene            1197..2354
                     /gene="pdxB"
                     /locus_tag="OQQ26_003083"
     CDS             1197..2354
                     /gene="pdxB"
                     /locus_tag="OQQ26_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020218743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HCS1858454.1"
                     /translation="MSETEKGLKILVDENMPYARDLFSRLGEVIAVPGRPIPVAQLAD
                     ADALMVRSVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAV
                     VEYVFSSLLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDLPRADRG
                     DEGDFRSLDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKTGAILINACRGAV
                     VDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQ
                     VFEAYSKFIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLR
                     KVAGIPGEFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
     gene            2420..3433
                     /locus_tag="OQQ26_003084"
     CDS             2420..3433
                     /locus_tag="OQQ26_003084"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HCS1858455.1"
                     /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG
                     EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
                     EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
                     ASVQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
                     EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
                     NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            3433..4245
                     /gene="truA"
                     /locus_tag="OQQ26_003085"
     CDS             3433..4245
                     /gene="truA"
                     /locus_tag="OQQ26_003085"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HCS1858456.1"
                     /translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKA
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
                     QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
     gene            4328..4987
                     /locus_tag="OQQ26_003086"
     CDS             4328..4987
                     /locus_tag="OQQ26_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1858457.1"
                     /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFS
                     NPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLLFTYAGYFFGTIPMVQDNLKLLIVGIIVVSILPGVIEIIRHKRAAARAA
                     K"
     gene            5143..6057
                     /gene="accD"
                     /locus_tag="OQQ26_003087"
     CDS             5143..6057
                     /gene="accD"
                     /locus_tag="OQQ26_003087"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HCS1858458.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
                     LMNLPAPNPEAPREGVVVPPVPDQEPEA"
     gene            6127..7395
                     /gene="folC"
                     /locus_tag="OQQ26_003088"
     CDS             6127..7395
                     /gene="folC"
                     /locus_tag="OQQ26_003088"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HCS1858459.1"
                     /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
                     LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
                     SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
                     ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSAKPAIVGEPEMPSTIADVAQEKGA
                     LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
                     IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
                     DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAGQLLEHLGNGKSFDSVAQAWDAAMADA
                     KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
     gene            7385..8047
                     /gene="dedD"
                     /locus_tag="OQQ26_003089"
     CDS             7385..8047
                     /gene="dedD"
                     /locus_tag="OQQ26_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HCS1858460.1"
                     /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
                     PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFESEPA
                     PVAPPKPKPVELPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
                     VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT
                     PN"
     gene            8306..8794
                     /gene="cvpA"
                     /locus_tag="OQQ26_003090"
     CDS             8306..8794
                     /gene="cvpA"
                     /locus_tag="OQQ26_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HCS1858461.1"
                     /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
                     CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
                     RA"
     gene            8831..10348
                     /gene="purF"
                     /locus_tag="OQQ26_003091"
     CDS             8831..10348
                     /gene="purF"
                     /locus_tag="OQQ26_003091"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HCS1858462.1"
                     /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
                     NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
                     FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIEAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQGYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
     gene            10443..11012
                     /gene="ubiX"
                     /locus_tag="OQQ26_003092"
     CDS             10443..11012
                     /gene="ubiX"
                     /locus_tag="OQQ26_003092"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin prenyltransferase UbiX"
                     /protein_id="HCS1858463.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
                     SLETDFSLREVQTLADVTHDARDIAASISSGSFQMLGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYYRPQSLD
                     DVINQTVNRVLDQFAITLPEDLFARWQGA"
     gene            11278..12075
                     /gene="argT"
                     /locus_tag="OQQ26_003093"
     CDS             11278..12075
                     /gene="argT"
                     /locus_tag="OQQ26_003093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HCS1858464.1"
                     /translation="MKKSILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDA
                     KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
                     AYANQDLVYSDLAAGRLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYF
                     GDGTGVGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
     gene            12296..13078
                     /gene="hisJ"
                     /locus_tag="OQQ26_003094"
     CDS             12296..13078
                     /gene="hisJ"
                     /locus_tag="OQQ26_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HCS1858465.1"
                     /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS
                     QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            13168..13854
                     /gene="hisQ"
                     /locus_tag="OQQ26_003095"
     CDS             13168..13854
                     /gene="hisQ"
                     /locus_tag="OQQ26_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter permease HisQ"
                     /protein_id="HCS1858466.1"
                     /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
                     SGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
                     ILKSTALVSLLGLEDVVKATQVAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
                     YSVGVKRADL"
     gene            13851..14567
                     /locus_tag="OQQ26_003096"
     CDS             13851..14567
                     /locus_tag="OQQ26_003096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HCS1858467.1"
                     /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
                     AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVSDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
                     SLFRRAEKRWLQHVKPSSTH"
     gene            14575..15348
                     /gene="hisP"
                     /locus_tag="OQQ26_003097"
     CDS             14575..15348
                     /gene="hisP"
                     /locus_tag="OQQ26_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HCS1858468.1"
                     /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
                     STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIVRALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
     gene            15545..>16128
                     /gene="rpnB"
                     /locus_tag="OQQ26_003098"
     CDS             15545..>16128
                     /gene="rpnB"
                     /locus_tag="OQQ26_003098"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnB"
                     /protein_id="HCS1858469.1"
                     /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT
                     LKLEPNSFIDEDLRQYYSNLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
                     MQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFVEPAIARKIYSSAFPLVDIT
                     VVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQ"
BASE COUNT         3782 a         3825 c         4500 g         4021 t
ORIGIN      
        1 aaattgtaga gcggttcatt ggagggcttc gtaatgtcga ttaagaagct cgaagatggt
       61 cgttatttgc tggacatcag gccgaacgga cgcaagggaa agcgcgtgcg taaggtattt
      121 gacaaaaaat cggtagcggt ggccactgaa cgctacatca tggcgaacgc tgaaaagcgg
      181 gaatatatac agggctaccg tgatcgtcga acgctaaatg atttgcttga gttgtggtgg
      241 atgtatcacg gccagcacag gcgtaaggcg gaagaagacc gaaaacaact gcgcaacata
      301 atcaatgagc ttggcgctga tatgcaggct gtggatcttg ataagctgaa aattatcgcg
      361 tggcgttctc aaaagatagc tgaaggattg aaaccgtcat ctgctaacag gtacatgaat
      421 cggttatccg gaatgtttac cgtgctgaaa aaaataggtc tttgggatgc agaacatcca
      481 gtaaggggaa tttctattct ttatgtatct ccacgagaaa tggcgttcct gtcacagaag
      541 gaagtggcgc tattgctcga tacactggag ggcgactatt ggcgtgttgc gcttttgtgt
      601 ttaagcacag gggcgcgctg gagtgaagct tgtaagcttc gtggtgaaca gatagttcat
      661 aaccgtgtaa cgtttcttga aaccaaaaat ggccggaaga gaacagtgcc aatttcgcag
      721 gcagtttgtg aggcgatcaa aaccagagaa acaggcggct tgtttgaggt gaagtaccgg
      781 gaattctgcc tggcgctgaa aagagttaag cccgatttac caaaaggcca ggctgcacat
      841 gtgctgcggc atacgttcgc cagccatttt gtgatgaacg gaggaaacat tattgcgctt
      901 cagaagattc ttggtcacgc aaccattcag caaacaatgg catatgcgca ttttgcaccg
      961 gattacctgc aggatgcggt ggcccttaat ccgctgaaag gtggcgtaag tgtccacgca
     1021 gtgtccacgg gggattaatt ttatatagcc tgaaacggct taaagggcga tactgaataa
     1081 caatttttca gtattgcccg tctaaatggt tatgttgtta tctgtatgat tattaatgtc
     1141 ttttcagatt aaacagcagt ttgcaaatgg gcgtttgttg ataaaggagc cttagattgt
     1201 cagagactga aaaagggtta aaaatccttg ttgatgaaaa tatgccttat gcccgcgact
     1261 tatttagccg tttgggtgag gtgatcgcgg ttcccgggcg tccaatcccc gtcgctcaac
     1321 tggcagacgc ggatgcgctg atggtgcgtt cggtcacgaa agtgaatgaa tctttgctgg
     1381 caggaaaacc cattaaattt gttggaactg ccactgcggg gaccgaccat gtcgatgaag
     1441 catggttgaa gcaggcggga attggttttt ccgctgcacc tggctgtaat gcgattgcgg
     1501 tggtggaata tgttttctcc tccctgctga tgcttgccga acgcgatgga ttttcactgc
     1561 acgaccgtac ggtggggatc gtgggcgttg gtaacgttgg acgtcgattg caggcgcgac
     1621 tggaagcgtt agggattaaa accttacttt gcgatctgcc tcgcgccgac cgtggggatg
     1681 agggtgattt ccgctcgctg gatgagttag tccagcgcgc ggatattctg actttccata
     1741 cgccactctt taaagatggt ccgtacaaaa cgctacatct ggcggatgaa aaactgatcc
     1801 gtagcctgaa gaccggagcg attctgatta acgcctgccg tggcgcagtc gtcgataata
     1861 ccgcgctgct gacctgcctg aatgaaggcc agaagttaag cgtggtgctg gatgtctggg
     1921 aaggcgagcc ggaacttaat gtggaattgc tgacaaaagt ggatatcggc acgccgcata
     1981 tcgcaggcta taccttggag ggtaaagcgc gtggcacgac gcaagtgttt gaagcctata
     2041 gcaagtttat tgggcatgaa caacacgttg cgctggatac gttgctgccc gcgcctgagt
     2101 ttggccgcat tacgctgcat ggtccgctcg atcaaccgac gctgaaaagg ctggtgcatt
     2161 tggtgtatga tgtgcgccgc gatgacgcac cgctgcgtaa agtcgccggg ataccgggtg
     2221 agttcgataa actgcgcaaa aactatcttg agcgccgtga atggtcatct ctgtatgtaa
     2281 tttgtgatga cgccagtgcg gcatcattgc tgtgtaaact gggttttaac gccgttcatc
     2341 atccggcacg ttaatctctt cttcatgctc tctgctgtaa cattggcagg gagctttgct
     2401 atttctggag taaaccacca tgtctgaagg ctggaacatt gccgtcctgg gcgcaactgg
     2461 cgctgtgggc gaagccctgc ttgaaacgct ggctgaacgt cagttcccgg ttggggaaat
     2521 ttatgcactg gcacgtaacg aaagcgcagg cgaacaactg cgctttggtg gtaaaacaat
     2581 caccgtgcag gatgccgctg aattcgactg gacgcaggcg cagctggcat tttttgtcgc
     2641 aggcaaagaa gctaccgctg cctgggttga agaagcgacc aactcaggtt gcctggtgat
     2701 cgacagcagc ggactgtttg ctctcgaacc cgacgtaccg ctggtggtgc cggaagtaaa
     2761 cccgtttgta ctgaccgatt accgcaaccg gaatgtcatc gctgtaccag acagtctgac
     2821 cagccagctg ctggcggcac tgaaaccgtt aatcgatcag ggcggtttgt cgcgtatcag
     2881 tgttaccagc ctgatttcag cctccgtcca gggcaaaaaa gcggtcgatg cgttagcggg
     2941 gcagagtgcg aaattgctca acggcattcc gattgacgaa gaagatttct tcggtcgtca
     3001 actggcgttc aatatgctgc cgttgttgcc ggatagcgaa ggtagcgtgc gtgaagaacg
     3061 tcgtatcgtt gacgaagtac gcaaaatcct gcaggacgaa gggctgatga tttcggcaag
     3121 cgtcgtccag gcaccggtat tctacggtca tgcccagatg gtcaactttg aagcactgcg
     3181 tccgctggcg gcagaagaag cgcgtgatgc gtttgctcag ggcgaagata ttgtgctctc
     3241 tgaagagaac gaattcccga ctcaggtagg ggatgcttcg ggtacgccgc atctttctgt
     3301 tggctgcgtg cgtaatgact acggtatgcc ggagcaagtc cagttctggt cggtggccga
     3361 taacgttcgc tttggcggcg cgctgatggc agtaaaaatc gccgagaaac tggtgcagga
     3421 gtatctgtac taatgtccga ccagcaacaa ctgccagttt ataaaattgc gctgggcatt
     3481 gagtacgacg gcagtaagta ttacggctgg caacggcaga atgaagtccg cagtgtgcag
     3541 gagaagctgg aaaaggcgct ctcccaggtg gcgaacgaac ccatcaccgt cttctgcgcc
     3601 gggcgtactg acgcaggggt acacggtacc gggcaagtgg tgcatttcga aacaaccgcg
     3661 cagcgcaaag acgctgcgtg gacgttgggc gtaaatgcga atttacctgg tgacatcgct
     3721 gtgcgttggg ttaaagctgt acctgatgat tttcatgccc gatttagcgc cacggctcgc
     3781 cgttatcgct acatcatcta caatcatcgg ctgcgcccgg cggtactgag taaaggggta
     3841 acccattttt acgaaccgct ggacgctgaa cggatgcatc gggctgcgca atgcttgctg
     3901 ggcgagaatg atttcacctc gttccgtgcg gtgcagtgcc agtcccgaac cccgtggcgc
     3961 aacgttatgc atattaatgt cacgcgtcac ggtccttatg tggtggtaga tatcaaagcg
     4021 aatgcctttg tacatcatat ggtcaggaat attgtcggca gcctgatgga agtcggtgcc
     4081 cacaaccagc cggagagctg gatagcagag ttgctggcgg caaaggacag aacgctggcg
     4141 gcagcaacgg caaaagcgga agggctgtat ctggtcgcgg tggattaccc tgaccggtat
     4201 gatcttccaa aaccgccaat gggcccgcta tttctggcgg actaacgaga ataatgctcg
     4261 gaacatttca ggctgtagcc aacgtagtta cagcctgaaa gatgacgagt acaaggcata
     4321 ggcaaatatg gacctgattt atttcctcat cgattttatc ctgcacattg acgtgcatct
     4381 ggcagagctg gtcgcggagt acggcgtctg ggtttatgcc attttgttct taattttgtt
     4441 ctgtgaaacc ggtctggtgg taacgccgtt tttaccgggt gattcattgc tgtttgttgc
     4501 cggagcgttg gcatcactgg aaaccaacga tctcaacgtc catatgatgg tggtgctgat
     4561 gctgatcgcc gcgattgtgg gtgacgcggt caattacact atcgggcggt tgttcggtga
     4621 aaagttattc agtaatccca attcgaaaat tttccgtcgc agttatctcg acaaaaccca
     4681 tcagttttat gagaaacatg gcggcaaaac gattattctc gcccgttttg tgccgatcgt
     4741 cagaacgttc gccccgtttg ttgcgggaat gggccacatg tcgtaccgtc atttcgccgc
     4801 ttataacgtg attggcgcac tgttgtgggt actgcttttt acctacgcag gctatttctt
     4861 cggtacaatc ccgatggttc aggataacct taagctgctg atcgtcggga ttattgtggt
     4921 ttctatattg ccgggtgtca tcgaaataat ccgtcacaaa cgcgctgcgg cacgcgccgc
     4981 aaagtaaaaa gtaactccgc ggttcgacca cttttttatc caaagtttcg ggctgttatg
     5041 ttttaatgtg caacattcat ggtctgttgg gggcaaaaat ggcattatgc gtccccaaag
     5101 ataaaactgg catcgaacca ggttcagaca gaaaggtccc taatgagctg gattgaacga
     5161 attaaaagca acattactcc cacccgcaag gcgagcattc ctgaaggggt gtggactaag
     5221 tgtgatagct gcggtcaggt tttataccgc gctgagctgg aacgtaatct tgaggtctgt
     5281 ccgaagtgtg accatcacat gcgtatgaca gcgcgtaatc gcctgcatag cctgttagat
     5341 gaaggaagcc ttgtggagct gggtagcgag cttgagccga aagatgtgct gaagtttcgt
     5401 gactccaaga agtataaaga ccgtctggca tctgcgcaga aagaaaccgg cgaaaaagat
     5461 gcgctggtgg tgatgaaagg cactctgtat ggaatgccgg ttgtcgctgc ggcattcgag
     5521 ttcgccttta tgggcggttc aatggggtct gttgtggggg cacgtttcgt gcgtgccgtt
     5581 gagcaggcgc tggaagataa ctgcccgctg atctgcttct ccgcctctgg tggcgcacgt
     5641 atgcaggaag cactgatgtc gctgatgcag atggcgaaaa cctctgcggc actggcaaaa
     5701 atgcaggagc gcggcttgcc gtacatctcc gtgctgaccg acccgacgat gggcggtgtt
     5761 tctgcaagtt tcgccatgct gggcgatctc aacatcgctg aaccgaaagc gttaattggc
     5821 tttgccggtc cgcgtgttat cgaacagacc gttcgcgaaa aactgccgcc aggattccag
     5881 cgcagtgaat tcctgatcga gaaaggcgcc atcgacatga tcgtccgtcg tccggaaatg
     5941 cgcctgaaac tggcgagcat tctggcgaag ttgatgaatc tgccagcgcc gaatcctgaa
     6001 gcgccgcgtg aaggcgtagt ggtacccccg gtaccggatc aggaacctga ggcctgataa
     6061 ctgataaggg cagggccact ggctctgccc ttttgctatt ctcaccgtaa cgaatcagcg
     6121 gataccatga ttatcaaacg cactcctcaa gccgcgtcgc ctctggcttc gtggctttct
     6181 tatctggaaa acctgcacag taaaactatc gatctcggcc ttgagcgcgt gagccaggtc
     6241 gcggcgcgtc ttggcgtcct gaaaccagcg ccatttgtgt ttaccgttgc gggtacgaat
     6301 ggcaaaggca ccacctgccg tacgctggag tcgattctga tggcggcagg gtacaaagtg
     6361 ggcgtctaca gttcaccgca tctggtgcgt tataccgagc gcgtacgtgt gcaggggcag
     6421 gaattgccgg aatcggccca caccgcctct tttgcggaga ttgaatcggc acgcggtgat
     6481 atttccctga cctatttcga gtacggtacg ctgtcggcgt tgtggctgtt caaacaggca
     6541 caacttgacg tagtgattct ggaagtaggg ctgggcggtc gtctggacgc aaccaatatt
     6601 gtcgatgccg atgtggctgt agtaaccagc attgcgctgg atcataccga ctggctggga
     6661 ccagatcgcg aaagtattgg tcgcgagaaa gcaggcatct ttcgcagcgc aaaaccggca
     6721 attgtcggtg agccggaaat gccttctacc attgctgatg tggcgcagga aaaaggtgca
     6781 ctgttacaac gtcggggcgt tgagtggaac tattccgtca ccgatcatga ctgggcgttt
     6841 agcgatgctc acggcacgct ggaaaacctg ccgttgccgc ttgtcccgca accgaatgcc
     6901 gcaacggcgc tggcggcact gcgtgccagc gggctggagg tcagtgaaaa tgccattcgc
     6961 gacgggattg ccagcgcaat tttgccggga cgtttccaga ttgtgagcga gtcgccacgc
     7021 gttatttttg atgtcgcgca taatccacat gcggcggaat atctcaccgg gcgtatgaaa
     7081 gcgctaccga aaaacgggcg cgtgctggcg gttatcggta tgctacatga taaagatatt
     7141 gccggaactc tggcctggtt gaaaagcgtg gttgatgact ggtattgtgc gccactggaa
     7201 gggccgcgcg gtgccacggc aggacaactg cttgagcatt tgggtaacgg caaatcattt
     7261 gatagcgttg cgcaggcatg ggatgccgca atggcggacg ctaaagcgga agacaccgtg
     7321 ctggtgtgtg gttctttcca cacggtcgca catgtcatgg aagtgattga cgcgaggaga
     7381 agcggtggca agtaagtttc agaatcggtt agtgggcacg atcgtgctgg tggcgctggg
     7441 ggtgattgta cttccagggc tgctggacgg gcagaaaaaa cattatcagg atgagtttgc
     7501 ggctatcccg ctggttccaa aagcgggcga tcgcgatgag cctgatatga tgccagccgc
     7561 cacccaggcg ttgccgacgc agccgccgga aggcgcagcg gaagaggtgc gggcaggtga
     7621 tgccgcagca ccgtcgctcg atccggccac tattgcagcc aataacaccg agtttgaatc
     7681 ggaacctgca ccggtcgccc caccgaagcc gaaaccggtg gagctgccta aaccaaaggt
     7741 tgaagcacca cctgcgccga agccagaacc gaagccggtc gtggaagaaa aagctgcacc
     7801 gacgggtaaa gcctatgttg tgcaactggg tgcgctgaaa aatgccgata aagtgaatga
     7861 gattgtcggt aagctgcgcg gtgccggtta tcgggtttat acgtcgccat ccacgccagt
     7921 gcagggtaaa attacccgta ttctggttgg gccggatgcc tcgaaagata agctgaaagg
     7981 ttcgctgggt gagttgaagc aactttctgg cttaagtggc gtggtaatgg gctatacgcc
     8041 gaattaatac ggtcttgcct gatgcgacgc tggcgcgtct tatcaggcct gggcaggggt
     8101 agaaccgtag gtcggataag gcgtttacgc cgcatccgac acgcattgca cgatgccgca
     8161 aaggcataaa aagtcgatgg cgttgaatat tttttcagcg ccatttttat tgatgcgtgg
     8221 gaaggaaatc cctacgcaaa cgttttcttt ttctgttaga atgcgccccg aacaggatga
     8281 cagggcgtaa aatcgtggga cacatatggt ctggattgat tacgccataa tcgcggtgat
     8341 tgctttttcc tctctggtta gcctgatccg cggctttgtt cgtgaagcgt tatcgctggt
     8401 gacatggggt tgtgctttct ttgttgccag tcattactac acttacctgt cagtctggtt
     8461 tacgggcttt gaagacgaac tggttcgaaa tgggattgcc atcgcggtac tgtttatcgc
     8521 taccctgatc gttggtgcta tcgtgaactt cgtgataggc cagctggtgg agaaaacggg
     8581 gttgtcaggc accgatcggg tgctgggcgt ctgtttcggt gcgttgcgcg gtgtgttgat
     8641 tgttgccgcc attctcttct ttctcgactc ctttaccggg gtgtcgaaaa gcgaagactg
     8701 gagcaaatca cagttgatcc cgcagttcag ttttatcatc agatggtttt ttgattatct
     8761 gcaaagctcg tcaagtttct tgcccagagc gtaagtgctc tgagatgtgg cttaacgagg
     8821 aaaaagacgt atgtgcggta ttgtcggtat cgccggtgtt atgccggtta accagtcgat
     8881 ttatgatgcc ttaacggtgc ttcagcatcg cggtcaggat gccgccggca tcatcaccat
     8941 agatgccaat aactgcttcc gtttgcgtaa agcgaacggg ctggtgagcg atgtatttga
     9001 agctcgccat atgcagcgtt tgcagggcaa tatgggcatt ggtcatgtgc gttaccctac
     9061 ggctggcagc tccagcgcct ctgaagcgca gccgttttac gttaactccc cgtatggcat
     9121 tacgcttgcc cacaacggca atctgaccaa cgctcacgag ttgcgtaaaa aactgtttga
     9181 agaaaaacgc cgccacatca acaccacttc cgactcggaa attctgctta atatcttcgc
     9241 cagcgagctg gacaacttcc gccactaccc gctggaagcc gacaatattt tcgctgccat
     9301 tgctgccaca aaccgcttaa tccgcggcgc gtatgcctgt gtggcgatga ttatcggcca
     9361 cggtatggtt gctttccgcg atccaaacgg gattcgtccg ctggtactgg gaaaacgtga
     9421 tattgacgag aaccgtacag aatatatggt cgcttccgaa agcgtagcgc tcgatacgct
     9481 gggctttgat ttcctgcgtg acgtcgcgcc gggcgaagcg atttacatca ctgaagaagg
     9541 gcagttgttt acccgtcaat gtgctgacaa tccggtcagc aatccgtgcc tgtttgagta
     9601 tgtatacttt gcccgcccgg actcgtttat cgacaaaatt tccgtttaca gcgcgcgtgt
     9661 gaatatgggc acgaaactgg gtgagaaaat tgcccgcgaa tgggaagatc tggatatcga
     9721 cgtggtgatc ccgatcccgg aaacctcgtg tgatatcgcg ctggaaattg ctcgtattct
     9781 gggcaagccg taccgccagg gcttcgttaa aaaccgctat gttggccgca ccttcatcat
     9841 gccgggccag cagctgcgtc gtaagtccgt gcgccgtaaa ctgaacgcca accgcgccga
     9901 gttccgcgat aaaaacgtcc tgctggtcga cgactccatc gtccgtggca ccacttctga
     9961 gcagattatc gagatggcac gcgaagccgg agcgaagaaa gtgtacctcg cttctgcggc
    10021 accggaaatt cgcttcccga acgtttacgg tattgatatg ccgagcgcta cggagcttat
    10081 cgcccacggt cgtgaagtgg atgaaattcg ccagatcatc ggtgctgacg gtttgatttt
    10141 ccaggatctg aacgatctga tcgaagccgt tcgcgctgaa aacccggata tccagcagtt
    10201 tgaatgctcg gtgttcaacg gcgtttacgt caccaaagat gttgatcagg gctacctcga
    10261 tttcctcgat actttacgta atgacgacgc caaagcagtg caacgtcaga acgaagtgga
    10321 aaatctcgaa atgcataacg aaggatgatg ccttcgctca gggtgccggt ctggcaccct
    10381 gacttgcaac tcccgccgaa atcctgcaaa gtctgcctgc aagtctgaca gggcaactat
    10441 ttatgaaacg actcattgta ggcatcagcg gtgccagcgg cgcgatttat ggcgtgcgct
    10501 tattacaggt tctgcgcgat gtcacagata tcgaaacgca tctggtgatg agccaggcag
    10561 cgcgccagac cttatccctc gaaacggatt tttctctgcg cgaagtgcag acattagccg
    10621 atgttacgca cgatgcgcgc gatattgccg ccagcatctc ttccggttct ttccagatgc
    10681 tggggatggt gattttaccc tgttcaatca aaaccctgtc cggcatagtc catagctata
    10741 ctgatggctt actgacccgt gcggcagatg tggtgctgaa agagcgtcgc ccgttggtgc
    10801 tctgcgtgcg tgaaacacca ttgcacttag gccatctgcg tttaatgact caggcggcag
    10861 aaatcggtgc ggtgattatg cctcccgttc cggcgtttta ttatcgcccg caatcccttg
    10921 atgatgtgat aaatcagacg gttaatcgtg ttcttgacca gtttgcgata acccttcctg
    10981 aagatctctt tgcccgctgg cagggcgcat aactccgctg ttgccctgtt tcagggcaat
    11041 tttgcaaccg cgatcaaatc ctcgacattt tgtttctgcc attcaatcga aacgctgcga
    11101 ttcaaccgct atacctgcta tcttcaactt caggacaata atgcaacgtc ttattaacat
    11161 atttaacgtt gaatgttact gttgtcgtca agatggcata agacctgcat gaaagagcct
    11221 gcaaacacac aacacaatac acaacataaa aaagccattt tcacttgagg gttatgtatg
    11281 aagaagtcga ttctcgctct gtctttgtta gtcggtctct ccacagcggc ttccagctat
    11341 gcggcgctac cggagacggt acgtatcgga accgatacca cctacgcacc gttctcatcg
    11401 aaagatgcta aaggtgattt tgttggcttt gatatcgatc tcggtaacga gatgtgcaaa
    11461 cggatgcagg tgaaatgtac ctgggttgcc agtgactttg acgcgctgat cccctcactg
    11521 aaagcgaaaa aaatcgacgc tattatttcg tcgctttcca ttaccgataa acgtcagcag
    11581 gagattgctt tctccgacaa gctgtacgcc gcagattctc gtttgattgc ggccaaaggt
    11641 tcaccgattc agccaacgct ggattcactg aaaggtaaac atgttggtgt gctgcaggga
    11701 tcaacccagg aagcatacgc taacgagacc tggcgtagca aaggcgtgga tgtggtggcc
    11761 tatgccaacc aggatttggt ctattccgat ctggctgcag gacgtctggc tgcaggacgt
    11821 ctggatgctg cgttacaaga tgaagttgct gccagcgaag gattcctcaa gcaacctgct
    11881 ggtaaagatt tcgcctttgc tggctcatca gtaaaagata aaaaatactt cggtgatggc
    11941 accggtgtag ggctacgtaa agatgatgct gaactgacgg ctgccttcaa taaggcgctt
    12001 ggcgagctgc gtcaggacgg cacctacgac aagatggcga aaaagtattt tgactttaat
    12061 gtctacggtg actgatacgt cgcagggaag ctgtacctga tggaatgatt atcatggtgc
    12121 acgccaggtt tgttgcacta tcgtggtgca ttgaaatgca tacttaagca tttttaatga
    12181 aaaataatac gtctaacggg gcgggatatt ttgccttgat ggtcaatttt atggcacgat
    12241 aagtgtaaca aacctgtaaa tattccctat aaaaagactg tcagttgagg acattatgaa
    12301 aaaactggtg ctatcgctct ctctggttct ggccttctcc agcgcaactg cggcgtttgc
    12361 tgcgattccg caaaacatcc gcatcggtac cgacccgacc tatgcgccat ttgaatcaaa
    12421 aaattcacaa ggcgaactgg ttggtttcga tatcgatctg gcgaaggagt tgtgcaagcg
    12481 catcaatacg caatgtacgt ttgtcgaaaa cccgctggat gcgttaatcc cgtccttaaa
    12541 agcgaagaag attgacgcca tcatgtcatc gctttccatt acggaaaaac gtcagcaaga
    12601 aattgccttc accgacaaac tgtacgctgc cgattctcgt ctggtggtgg cgaaaaattc
    12661 cgacattcag ccgacagtcg agtcgctgaa aggcaagcgg gtaggcgtat tgcagggcac
    12721 cacccaggag acgttcggta acgaacactg ggcaccaaaa ggcattgaaa tcgtctcgta
    12781 tcaggggcag gacaacattt attctgacct gactgccgga cgtattgatg ccgcgttcca
    12841 ggatgaggtc gctgccagtg aaggtttcct caaacaaccc gtcggtaaag attacaaatt
    12901 cggtggcccg tctgttaaag atgaaaaact gtttggtgta gggaccggca tgggcctgcg
    12961 taaagaagat aacgaactgc gcgaggcact gaacaaagcc tttgccgaaa tgcgcgctga
    13021 cggtacttac gagaaattag cgaaaaagta cttcgatttt gatgtttatg gcggttaatc
    13081 gccatcggtg aaagaaagcc cgctcccttc gggtaaccgg agggagacaa gaggcggtaa
    13141 ttcaccacac acgacaggac aggcagcatg ttgtatgggt tttcaggtgt tattttacag
    13201 ggtgcgctcg tcacgctgga gctggctatc agttctgtag tgctcgctgt aatcatcggt
    13261 ttaattggcg ctggcggtaa gctctcgcaa aatcggcttt cggggctgat tttcgaaggg
    13321 tacaccacgc tgattcgagg cgtgccggac ttggtgttga tgctgctgat tttctacggt
    13381 ttgcagattg cactaaacac ggtgacggag gcgatgggcg tcgggcagat tgatatcgat
    13441 ccgatggtcg ctggtattat tactctcggt tttatctacg gtgcttattt taccgaaacg
    13501 ttccgtggcg cgtttatggc agtgccgaaa gggcatatag aggcggcgac ggcgttcggt
    13561 tttactcgtg ggcaagtgtt tcggcggatc atgtttccgg cgatgatgcg ttacgccctg
    13621 ccaggcattg gcaacaattg gcaggtgatc ctcaaatcta ccgcactggt ttcgttactc
    13681 ggcctggaag atgtggtcaa agccacccaa gtggcaggca aaagtacctg ggaaccgttc
    13741 tatttcgcca tcgtctgtgg cgtgatttac ctggttttca ccaccgtttc caatggtgtg
    13801 ctgctgttcc ttgagcgccg ctactccgtg ggtgtgaaga gggctgacct gtgatcgaaa
    13861 tcttacatga atactggaaa ccgctgctgt ggaccgacgg ttatcgcttt actggtgtgg
    13921 cgatcactct gtggctgctt attttgtcgg tagtgatagg cggagtcctg gcgctgtttc
    13981 tggcgattgg tcgtgtctcc agtaataaat acatccagtt tccaatctgg ttatttacct
    14041 atatttttcg cggtacgccg ctgtatgttc agttgctggt gttctattcc ggcatgtaca
    14101 cgcttgagat tgttaaggga accgaattcc ttaacgcttt cttccgcagt ggcctgaact
    14161 gtaccgtgct ggcgctgacg cttaacacct gcgcttacac taccgagatt tttgctgggg
    14221 caatccgttc ggttccgcat ggggaaattg aagccgccag agcctatggc ttctcgactt
    14281 ttaaaatgta tcgctgcatt attttgcctt ctgcgctgcg tattgcgtta ccggcataca
    14341 gcaacgaagt gatcctgatg ctgcactcta ctgcgctggc gtttacggcc actgtgtcgg
    14401 atctgctgaa aatagcccgc gatattaacg ccgccacgta tcaacctttt accgccttcg
    14461 gcattgccgc ggtgctctat ttaatcatct cttatgtcct gatcagcctc tttcgcagag
    14521 cggaaaaacg ctggttgcag catgtgaaac cttcttcaac gcactgagaa tacgatgtcc
    14581 gagaataaat taaacgttat cgatttgcac aaacgctacg gcgaacatga agtgctgaaa
    14641 ggggtgtcac tgcaagcgaa tgccggagat gtaataagca tcatcggatc gtcgggatcg
    14701 gggaaaagta cctttctgcg ctgcattaac ttcctcgaaa aaccgagtga agggtcgatc
    14761 gtggtcaatg gccagacgat caatctggtg cgcgacaaag acggtcaact caaagtcgcc
    14821 gataaaaatc aactgcgctt actgcgcaca cgcctgacga tggtattcca gcacttcaat
    14881 ctctggagcc atatgacggt gctggaaaac gtcatggaag cgccgattca ggtgttgggc
    14941 ctgagcaagc aggaagcgcg cgagcgggcg gtcaagtatc tggcaaaagt cgggatagac
    15001 gaacgtgcgc aggggaaata tccggtgcat ctttccggcg gtcagcaaca gcgtgtttct
    15061 atcgtgcggg cgctggcgat ggaaccggaa gttttactgt ttgatgaacc tacctcggcg
    15121 ctcgatcctg aactggtagg cgaagtgttg cgtattatgc agcaactggc agaagagggg
    15181 aaaaccatgg tggtagtgac tcacgaaatg ggctttgctc gccatgtttc tactcatgtc
    15241 attttcctcc atcaggggaa aatagaagaa gagggcgcgc cggagcagtt atttggcaac
    15301 ccgcaaagcc ctcgtctgca acagttcctt aagggatcgc tgaaataatt tcctctccgg
    15361 tggctaacgc tgccggagta ttttcatggg gaatttgcga gtcagcttcc gctgaaatgt
    15421 aaaagttgca gtccgctaaa aatacttctg aattcgttgt ccaaagataa aaactgcctg
    15481 ctgcattggg tgttaatcgt ggttattgtc gcgtcatctt aaatttgagg ggtgacggaa
    15541 cgccatgaca atatccacaa cttccacgcc gcatgatgcg gtatttaaat cttttttacg
    15601 ccatccagac accgcgcggg attttattga tattcatctt cccgcgccgc tgcgcaaact
    15661 gtgtgattta acgacgctta aactggaacc aaacagtttt attgatgaag acctgcggca
    15721 atattattcc aacctcttgt ggtctgtgaa aacgcaggag ggagtgggtt atatttatgt
    15781 agtgatagag caccaaagta agccggaaga attaatggct tttcgcatga tgcgttattc
    15841 cattgcggca atgcaaaacc atcttgatgc gggctataaa gagcttccat tggtgatccc
    15901 gatgctgttt tatcatggtt gcagaagtcc ttatccttat tcactctgct ggcttgatga
    15961 atttgtcgag cctgctatag cccgcaaaat atattcatcg gcttttccgt tggtggatat
    16021 taccgtggtg ccggatgacg agattatgca acatcgcaaa atggcgctgt tggagttaat
    16081 tcagaaacat attcgtcagc gcgatctgtt gggattagtc gaccaaat
//
LOCUS       DAJVTL010000101        16069 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.103, whole genome shotgun sequence.
ACCESSION   DAJVTL010000101 DAJVTL010000000
VERSION     DAJVTL010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16069
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.103"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..2290
                     /gene="bisC"
                     /locus_tag="OQQ26_003099"
     CDS             <1..2290
                     /gene="bisC"
                     /locus_tag="OQQ26_003099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312463.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin sulfoxide reductase"
                     /protein_id="HCS1858470.1"
                     /translation="WGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRF
                     PMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGW
                     RSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLV
                     LEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFG
                     DKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYAVFVSYLLGESDGIAK
                     TAEWAAEICGVNAAKIRELAAIFHQNTTMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQ
                     IGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGG
                     AYQHNGMDRHFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHA
                     DIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGY
                     ARFTEGKSQLQWLETIYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERFIRF
                     ADFCRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLVPDEWQGNAEPEQLQVL
                     SAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQARGIQDGDTVRLWNARGQILA
                     GAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDLPSSRLGNGCAGNTAL
                     AWLEKYNGPELTLTAFEPPASS"
     gene            complement(2259..2699)
                     /locus_tag="OQQ26_003100"
     CDS             complement(2259..2699)
                     /locus_tag="OQQ26_003100"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1858471.1"
                     /translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAY
                     LANAQNWVWEEDGKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLML
                     EVYQKNQPAIDFYRAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
     gene            complement(2696..3259)
                     /gene="tag"
                     /locus_tag="OQQ26_003101"
     CDS             complement(2696..3259)
                     /gene="tag"
                     /locus_tag="OQQ26_003101"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HCS1858472.1"
                     /translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKNLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
                     LQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHVVGCCCYPGNKP"
     gene            3417..4115
                     /locus_tag="OQQ26_003102"
     CDS             3417..4115
                     /locus_tag="OQQ26_003102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312460.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HCS1858473.1"
                     /translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHS
                     TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
                     VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTFGWRVDSRLGDLRPWAQI
                     SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTN
                     NSDYLYTMGVSARF"
     gene            4344..5552
                     /locus_tag="OQQ26_003103"
     CDS             4344..5552
                     /locus_tag="OQQ26_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709325.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1858474.1"
                     /translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
                     VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSNNLMML
                     WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
                     TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
                     LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
                     IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
                     LNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
                     KMLREAHGSL"
     gene            5876..7567
                     /gene="eptB"
                     /locus_tag="OQQ26_003104"
     CDS             5876..7567
                     /gene="eptB"
                     /locus_tag="OQQ26_003104"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418002.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HCS1858475.1"
                     /translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
                     GVSAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
                     LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
                     ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYQRNTTPKL
                     AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
                     YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
                     ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
                     QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
                     AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQTKVAAAN"
     gene            7659..7735
                     /locus_tag="OQQ26_003105"
     tRNA            7659..7735
                     /locus_tag="OQQ26_003105"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7693..7695,aa:Pro,seq:cgg)
     gene            7770..7903
                     /locus_tag="OQQ26_003106"
     ncRNA           7770..7903
                     /ncRNA_class="other"
                     /locus_tag="OQQ26_003106"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            8648..10255
                     /gene="dppA"
                     /locus_tag="OQQ26_003107"
     CDS             8648..10255
                     /gene="dppA"
                     /locus_tag="OQQ26_003107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter substrate-binding
                     protein DppA"
                     /protein_id="HCS1858476.1"
                     /translation="MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNP
                     QLFTSGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWH
                     DNKEFKPTREMNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDD
                     NTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQY
                     QKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARM
                     KQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSA
                     KNLIPPTMWGYNDDVQDYTYYPEKAKVLLKEAGLEKGFSIDLWAMPVQRPYNPNARRM
                     AEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDLDNFFATLFSC
                     AASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTV
                     FEPVRKEVKGYVVDPLGKHHFENVSIE"
     gene            10563..11582
                     /gene="dppB"
                     /locus_tag="OQQ26_003108"
     CDS             10563..11582
                     /gene="dppB"
                     /locus_tag="OQQ26_003108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HCS1858477.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
                     GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            11592..12494
                     /gene="dppC"
                     /locus_tag="OQQ26_003109"
     CDS             11592..12494
                     /gene="dppC"
                     /locus_tag="OQQ26_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HCS1858478.1"
                     /translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
                     IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSL
                     LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
                     IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
                     LIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
                     LLTVLAFNLMGDGLRDALDPKLKQ"
     gene            12505..13488
                     /gene="dppD"
                     /locus_tag="OQQ26_003110"
     CDS             12505..13488
                     /gene="dppD"
                     /locus_tag="OQQ26_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HCS1858479.1"
                     /translation="MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLIIHDLALVA
                     EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
                     KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
     gene            13485..14489
                     /gene="dppF"
                     /locus_tag="OQQ26_003111"
     CDS             13485..14489
                     /gene="dppF"
                     /locus_tag="OQQ26_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP binding subunit
                     DppF"
                     /protein_id="HCS1858480.1"
                     /translation="MSTQEATSQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSFSKEQRREKALSMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
                     IKLTGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
                     "
     gene            complement(14519..15790)
                     /locus_tag="OQQ26_003112"
     CDS             complement(14519..15790)
                     /locus_tag="OQQ26_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HCS1858481.1"
                     /translation="MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
                     KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
                     LMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLF
                     KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
                     VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
                     EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
                     DTKKINSRVLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
                     AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
BASE COUNT         3817 a         4020 c         4312 g         3920 t
ORIGIN      
        1 ctgggggccc atgctggttg aaaccgacgg cgaaaccgtg tttagctcgc gtggcgcgtt
       61 agccacagga atggaaaact ccttgcagag cgcggttcgc gaccaggttc acagcaatac
      121 gcgggtacga tttccaatgg tgcgcaaagg ctttctcgcg tcaccggaaa acccgcaagg
      181 cattcgtggg caggatgaat ttgttcgcgt gagttgggat gaggcgctgg atcttattca
      241 ccaacaacat aaacgcattc gtgaggctta tggtccggca tcgatttttg ctggttccta
      301 cggctggcgt tcaaacggcg tgctgcataa ggcctcgaca ttattacaac gctatatggc
      361 gctggcaggc ggttataccg ggcatctggg ggattattcg accggtgcgg cacaggcgat
      421 catgccgtat gtcgtaggtg gcagcgaagt ttatcaacag caaaccagtt ggccgctggt
      481 gctggaacat agcgatgtcg tggtgttgtg gagtgctaac ccactcaata cgctgaaaat
      541 tgcgtggaat gcatctgatg agcaggggct ttcttacttt tccgcactgc gtgacagcgg
      601 gaaaaagctg atctgtattg atccaatgcg atcggaaacc gtcgatttct ttggcgataa
      661 aatggagtgg gtggcaccgc acatgggcac cgatgttgcg ctgatgctgg ggatcgccca
      721 tacgctggtg gaaaatggtt ggcacgacga agcgtttctg gcgcgttgca ccacaggtta
      781 tgccgtcttc gtctcttatt tgctgggcga gagtgacgga atagccaaaa ccgccgaatg
      841 ggcggcagag atttgtgggg ttaacgcagc gaaaatccgc gagctggcgg ctattttcca
      901 ccaaaatacc accatgctga tggcaggctg gggaatgcag cgccaacagt ttggtgagca
      961 aaaacactgg atgatcgtca cgctggcagc aatgttgggg caaatcggca cacccggcgg
     1021 cggttttggt ctttcttacc attttgccaa tggtggtaac cccacgcggc gcgctgcggt
     1081 actctcttcc atgcagggca gcttgccggg tggctgcgat gcggtagata aaatccctgt
     1141 cgcccgcatt gttgaagcac tggaaaaccc cggtggcgca tatcaacaca acggtatgga
     1201 ccggcatttc ccggatattc gttttatctg gtgggcgggc ggtgccaact ttactcatca
     1261 tcaggatacc aatcgcctga ttcgtgcctg gcaaaaaccg gagctggtgg tgatctccga
     1321 atgtttctgg acggcggcgg caaaacacgc ggatatcgtt ctgcctgcga ccacctcgtt
     1381 tgagcgtaat gatctcacca tgaccggcga ttacagtaat cagcatctgg tgccgatgaa
     1441 gcaagtggtg ccgccacgct atgaagcgcg taatgatttt gatgtttttg ccgagttgag
     1501 tgaacgttgg gagaagggcg gctatgcgcg gtttacggaa ggaaaaagtc agctgcaatg
     1561 gctggaaacg atttataacg ttgcccggca gcgcggggca agccagcagg ttgaattgcc
     1621 gccatttgct gagttctggc aagccaacca gttaattgag atgccggaaa acccggacag
     1681 cgagcggttt attcgcttcg ctgatttttg ccgcgatccg caggcgcatc cattaaaaac
     1741 cgccagcggt aagattgaaa tcttctcgca gcgtattgcc gattacgctt atccggattg
     1801 cccggggcat ccaatgtggc tggtgccgga cgaatggcag ggcaatgccg aaccggaaca
     1861 gttacaggta ctttctgctc atcctgcgca tcgtctgcac agccagctga attacagttc
     1921 tctgcgcgaa ttgtacgcgg tggcaaatcg tgagcctgtc accattcatc ctgacgatgc
     1981 tcaggcgcgc ggcatacaag atggcgatac tgttcggttg tggaacgcac gcgggcaaat
     2041 tcttgccgga gcggtcatta gcgagggaat taaacctggc gtgatttgca ttcacgaagg
     2101 ggcatggccg gatctggatt taaccgctga cggtatttgt aaaaacggcg cagtgaacgt
     2161 gctgaccaaa gatctcccca gctcgcggct ggggaatggc tgtgcgggta atacggcgct
     2221 ggcatggctg gaaaaataca acggtccgga actgacactt acagcgtttg aaccaccggc
     2281 cagctcataa tccaggtggg tagttgggtt tcatcctgcc atgcgcaatc gacaatgtga
     2341 aaaccctgcg cacggtaaaa atctatcgcc ggttgatttt tttgataaac ctccagcatc
     2401 agatggggat ggcgctgctg cacatattgc atcagcgcct taccaatacc gcgtctgacg
     2461 gccttcggtg cgacaaacat cgctgccaga aatcggcctt ccataatgct gacaaaaccg
     2521 agaagcttac cgtcttcttc ccagacccag ttttgcgcgt tggcaagata ggcatcccgc
     2581 accagcggaa tgcagtcacg ccagtaattc gcttttataa agggatgtcc ccaggttgta
     2641 ctttccagcc acagttcgag gatcgcgggg agttctgaac gttgcgcttc ccgaatcatg
     2701 gtttatttcc cggatagcaa cagcagccaa ccacatgatc attcaccagc ccacatgcct
     2761 gcataaagga gtaacagatt gtggtaccga caaacttaaa accacgtttt ttcagtgctt
     2821 tagatagggc gtcggaggcg ggcgtagagg tggggatttc gctcaacgtt gtggcttgtg
     2881 tcacctgtgg ctgatgattt acaaacgacc agacaaagtc ggcaaacggt tcgccgttct
     2941 gttccatttg caggtacgcc cgcgcattac caataattgc ctgaattttc ccgcgatggc
     3001 ggataatccc ggcgtcctgt accagtcttt cgacatcctc ttcctgcatt gcggcaacct
     3061 tcaccggatc gaactgatga aagcaggcgc gatagttttc ccgttttttg aggacggtga
     3121 tccacgataa tccagcctgc tgcccttcaa ggcagatcat ttcgaacagg tttttactgt
     3181 cagtttcagg cacgccccac tcattatcat ggtaggcaat ataaagcggg tcctgactca
     3241 cccagccgca acgttccata ctttccctcg ctatgtaccc gatcgtaaaa atttcagccg
     3301 cttttcttga cgcatcggtg aaaaagtcaa tatttaatac agggctacta tgcccgatat
     3361 ccttcataca atgacaataa tattgccgaa ttcggctctt ccctggagtc gtgttaatga
     3421 tcataaaaaa aagcggtggt cgctggcagc taagcctgct ggcgagtgtg gtaatcagtg
     3481 ccttttttct caacacagct tacgcctggc aacaagaata tatcgttgat acgcaacccg
     3541 gacattccac agagcgttac acctgggata gtgatcatca acctgattac aacgatattt
     3601 tgtcgcaacg tattcaaagt agccaaaggg cgctgggact ggaagtcaat ctggcggaag
     3661 aaacccctgt ggatgtgacc agcagtatga gtatgggctg gaattttcct ttatatgaac
     3721 aggttacaac cggcccggtc gcggcattac attacgatgg tacaaccacc tcgatgtata
     3781 acgagtttgg cgacagtact accacgctga ccgatccgtt atggcatgcc agcgtgagta
     3841 ccttcggttg gcgtgttgac tcccggcttg gcgatctccg accctgggcg caaatcagct
     3901 ataaccagca atttggcgag aatatctgga aggcgcaatc aggcttaagc cggatgacgg
     3961 cgacaaacca gaacggcaac tggctggatg tcaccgtagg cgctgatatg ttgctcaatc
     4021 aaaatattgc cgcctatgcg gcgctatctc aggcagaaaa taccactaac aatagcgatt
     4081 atctgtatac gatgggggtt agcgccagat tttaacgtaa cagtcacaat tgaaaccatt
     4141 gaataacaat gcttgtggcg atagtgggtg ctaacttacc acatgataaa tttggtgaat
     4201 aattgtcgcg tcattcattc ctgaactaag gcatttcatt ccgttctgat ggcatttcat
     4261 gccgtttttc cccaggcata aagtgcactt cgttatggtt gtcggcagag atttttcctt
     4321 tttattactg caggaatact gccatgacac cttcaaatta tcagcgtacc cgctggctga
     4381 cactcatcgg tactatcatt acccagtttg cgctggggtc ggtttatacc tggagcctgt
     4441 ttaatggcgc gctttccgcc aagctggatg cgccggtaag ccaggtcgct ttctctttcg
     4501 gcttgttaag tctggggctg gcaatttcgt cttctgttgc gggcaaattg caggaacgtt
     4561 ttggcgttaa acgcgtcacc atggcttccg gcattttgct gggattaggc ttcttcctga
     4621 ccgcgcattc caacaacctg atgatgctgt ggttaagcgc cggtgtgctg gtcggtctgg
     4681 cggatggcgc gggttacctg ctgacgctct ctaactgcgt gaagtggttc ccggagcgta
     4741 aaggtctgat ctccgcgttc gctatcggtt cttatggtct gggtagcctg ggtttcaaat
     4801 ttatcgacac gcagctgctc gaaacggtgg gtctggaaaa aacctttgtg atttggggag
     4861 cgattgcgct ggtgatgatt gttttcggcg caacgttaat gaaagacgca ccaaaacagg
     4921 aagtgaaaac cagcaatggt gtggtggaga aagattacac gctggcagag tcgatgcgta
     4981 aaccgcagta ctggatgtta gcggtaatgt tcctgactgc ctgcatgagc ggcctgtacg
     5041 tgattggagt agcgaaagat atcgcccaaa gtctggcaca ccttgatgtg gtttccgcag
     5101 ctaatgcagt cactgttatt tccatcgcca acctttcagg tcgtctggtt ctggggatac
     5161 tgtctgacaa aatcgcccgt atccgtgtta tcaccattgg tcaggtgatt tcgctagtgg
     5221 gtatggcggc cctgctgttt gcaccactga atgcagtgac gttctttgca gcgattgcct
     5281 gcgtggcatt taactttggc ggcactatta ccgtctttcc gtcactggtc agtgagttct
     5341 tcggcctcaa taacctggcg aaaaactacg gtgtgattta cctcggtttc ggtatcggta
     5401 gcatttttgg ttcgattatc gcctcactgt ttggcggttt ctatgtgacc ttctacgtga
     5461 ttttcgccct gctgattctg tcattggcgc tttctacgac gattcgtcag ccagagcaga
     5521 aaatgttgcg tgaggcgcat ggctcccttt aatgctcagc cgagagctac tgggcttcag
     5581 cttccgtgtg catcaaacgc atcaacgaaa tgtataaaca atgactcgta aaatttgggc
     5641 cagttaactg gcccttttta ctgctttttg taacgctaaa gtctcttttc aaacttgcat
     5701 ttttgtaaat ttgtgcttca tgcacactct ttccccacac tttttcgctt tgctgtggtc
     5761 tacttattcg cgcgtgtaga ttttacttat ctgactacct ccgcactttt cccctgccgg
     5821 gcctgaaaag ccgctaagca gggtgttatc acctgtttgt ccagggtttg tttgcatgag
     5881 atacatcaaa tcgattacac agcagaagct gagctttttg cttgcaatct atattggcct
     5941 ttttatgaat ggcgcggttt tttatcgccg cttcggcagc tatgcgcacg attttaccgt
     6001 ctggaaaggc gtttctgctg ttgttgaact ggccgccacc gtactggtga ccttcttttt
     6061 actacgtctt ctatcgctgt ttggccgccg cagctggcgt attctggcgt cgctggtggt
     6121 gctcttttcc gcaggtgcca gctattacat gaccttcctt aatgtggtca ttggttatgg
     6181 catcatcgct tccgtcatga ccaccgatat cgacctgtca aaagaagttg ttggtctgaa
     6241 ctttattctc tggttaatcg ccgttagtgc attgcctctt atccttatct ggaataaccg
     6301 ctgtcgctac accttgctcc gacaactgcg aaccccaggg cagcgtattc gcagcctggc
     6361 ggtcgtcgta ctggcgggta ttatggtttg ggcaccgatt cgtttgctgg atatccagca
     6421 gaagaaagtg gagagggcga ccggcgttga tttgccgagt tatggcggtg tcgtagcgaa
     6481 ctcttatctg ccatcaaact ggctttctgc gttggggctg tatgcctggg cgcgggtcga
     6541 tgaatcttcc gataataatt cattgcttaa tccggcgaag aagtttacat accaggctcc
     6601 acaaaacgtt gatgatactt atgtcgtgtt tatcatcggt gaaaccacgc gttgggacca
     6661 tatgggcatt ttcggctatc agcgtaatac cacgccgaag ctggcccagg agaaaaatct
     6721 ggcggcgttc cgtggttact cctgtgatac cgcaaccaaa ctctcactgc gttgcatgtt
     6781 tgtgcgtcag ggtggagcag aagataatcc gcagcgcaca ttaaaagaac agaacatatt
     6841 cgcggtgctg aagcagttag gattcagttc tgacctctac gctatgcaga gcgaaatgtg
     6901 gttctacagc aacacgatgg cggacaacat tgcttatcgt gagcagattg gtgcggagcc
     6961 acgtaatcgt ggtaagccgg tagatgatat gttactggta gacgaaatgc agcaatcgct
     7021 ggggcgcaac ccggatggta agcatctgat cattctgcat accaaaggtt cgcattttaa
     7081 ctacacccag cgttatccgc gtagcttcgc gcagtggaag ccggaatgta ttggtgttga
     7141 tagcggctgt accaaagcgc agatgatcaa ctcctatgac aactcggtga cctatgtgga
     7201 tcactttatc tccagtgtga ttgatcaggt tcgcgataag aaagcgattg tgttctacgc
     7261 agctgaccac ggtgagtcaa ttaatgaacg cgagcacctg cacggcacgc cgcgtgaact
     7321 ggcaccgccg gagcagttcc gcgtaccgat gatggtctgg atgtcagata aatatctgga
     7381 aaatccggcc aatgcgcagg cgtttgcgca gctgaaaaaa gaagccgaca tgaaagtgcc
     7441 acgccgtcac gtagagctgt acgacaccat catgggttgt cttggctata cttcaccgga
     7501 tggtggaatt aacgaaaaca acaactggtg tcacatcccg cagacaaaag tggcagcggc
     7561 taactaagcg gcctgctgac tttctcgccg atcaaaaggc attttgctat taagggattg
     7621 acgagggcgt atctgcgcag taagatgcgc cccgcattcg gtgattggcg cagcttggta
     7681 gcgcacttcg ttcgggacga aggggtcgga ggttcgaatc ctctatcacc gaccaaattc
     7741 gaaaagcctg ctcaacgagc aggctttttt gcatttgaag cccatgagga tgagaacctc
     7801 cgggggcggg gaggttcgac tcaagcgaag cgagagaacg ttgcgccagc aacggcccgc
     7861 agggcgagcc acgaagtggc gagtaatcct ctatcaccga ccaaattcga aaagcctgct
     7921 cagcgagcag gcttttttgc atttgtagct catgaggatg agaacctccg ggggcgggga
     7981 ggttcgactc gacgtaggcc tgataagacg cgccagcgtc gcatcaggca acggcaccgc
     8041 acttattgtc ggatgcggcg cgaccgcctt attcgaccaa cacaccacac attttcctgc
     8101 caactttgcg tcccatatct cactatccat taacggattt gtgacagaaa ccattgtctt
     8161 tttttatatt tgcttaaatc tttttttgcg ttacttatga ctggcgctgg cattttccgc
     8221 tgtgcgtttt agcgttcatg gtattaatcg ctcagatatc caccttttcc tcagattttt
     8281 ttcactaaat gcataaaact taatcaccaa atgttgctaa atattaagat gattgttctg
     8341 gttatgttgg agtagcacaa atttctctgc tgcaaatagc tgtttgaagt ttttttaatc
     8401 tttgtttgtg gattctcacc gttggtgtaa atcccggttg gctgtattga cgttttcaca
     8461 ttctgttgac agattgtagg tcacgagggg cattttatgg aggatccgca ctgttacact
     8521 gatgttaatt agtacggcat ccccacctca taacgttgac ccgaccgggc aaaaaacaaa
     8581 aaaggtcagg cagcgacaac ccactgcaaa gggttaaaac aacaaacatc acaattggag
     8641 cagaataatg cgtatttcct tgaaaaagtc agggatgctg aagcttggtc tcagcctggt
     8701 ggctatgacc gtcgcagcaa gtgttcaggc taaaactctg gtttattgct cagaaggatc
     8761 tccggaaggg tttaacccgc agctgtttac ctccggcacc acctatgacg cctcttccgt
     8821 cccgctttat aaccgcctgg ttgaatttaa aatcggcacc accgaagtga tcccgggcct
     8881 cgctgaaaag tgggaagtca gcgaagacgg taaaacctat accttccatc tgcgtaaagg
     8941 tgtgaagtgg cacgacaata aagaattcaa accgacgcgc gaaatgaacg ccgatgacgt
     9001 ggtgttctcg ttcgatcgtc agaaaaacgc gcaaaacccg taccataaag tttctggcgg
     9061 cagctacgaa tacttcgaag gtatgggctt gccggagctg atcagcgaag tgaaaaaggt
     9121 ggacgataac accgttcagt ttgtgctgac tcgaccggaa gcgccgttcc tcgctgacct
     9181 ggcaatggac ttcgcctcta ttctgtcaaa agaatatgct gatgcgatga tgaaagctgg
     9241 tacaccggaa aaactggacc tcaacccaat cggaaccggt ccgttccagt tacagcagta
     9301 ccaaaaagat tcccgtatcc gctacaaagc gtttgatggc tactggggca ccaaaccgca
     9361 gatcgatacg ctggttttct ctattacccc tgatgcttcc gtgcgttacg cgaaattgca
     9421 gaagaatgaa tgccaggtga tgccgtaccc gaacccggca gacatcgctc gcatgaagca
     9481 ggataaatcc atcaatctga tggaaatgcc ggggctgaac gtcggttatc tctcgtataa
     9541 cgtgcagaaa aaaccgctgg atgacgtgaa agttcgccag gcactgacct acgcggtgaa
     9601 caaagacgcg atcatcaaag cggtttatca gggcgcgggt gtatcggcga aaaacctgat
     9661 cccgccaacc atgtggggct ataacgacga cgttcaggat tacacctact atcctgaaaa
     9721 agcgaaagtc ttgctgaaag aagcgggtct ggaaaaaggt ttctccatcg acctgtgggc
     9781 gatgccggta cagcgcccat ataacccgaa cgctcgccgc atggcggaga tgattcaggc
     9841 tgactgggcg aaagtcggcg tgcaggccaa aattgtcacc tacgaatggg gtgagtacct
     9901 caagcgtgcg aaagatggcg agcaccagac ggtaatgatg ggctggactg gcgataacgg
     9961 ggatctggat aacttcttcg ccaccctgtt cagctgcgcc gcctctgaac aaggctccaa
    10021 ctactcaaaa tggtgctaca aaccgtttga agatctgatt caaccggcgc gtgctaccga
    10081 cgaccataac aaacgcgttg aactgtacaa acaagcacag gtggtgatgc acgatcaggc
    10141 tccggcactg atcatcgctc actccaccgt gtttgaaccg gtacgcaaag aagttaaagg
    10201 ctatgtggtt gatccattag gcaaacatca cttcgaaaac gtctctatcg aataattaaa
    10261 agccatacaa gactgatggc aaaggcaaaa ctgcctgatg tgctccgctt atcaggccta
    10321 cgaaaattct gcaatgtatt gaatttgcac gattttgtag gccggataag gcgttaacgc
    10381 cgcatccggc ataaacaaag cgcactttgt caacaatctg tatacccggt ggcgctgtgc
    10441 ctctgcgtgc ggcgccatcc ggcagcaata cttcattccc tgtccgataa gggcgggaat
    10501 tgatttgtga gcaatacaga cacgcagttc caggctgcgg gtcactatag agaatccggg
    10561 ttatgttgca gtttattctc cgacgtttgg gactcgtcat ccccacgttt atcggtatta
    10621 cccttctcac atttgccttt gtccacatga tcccgggcga tccggtgatg atcatggcag
    10681 gcgaacgtgg gatctcccct gagcgtcacg cgcagctgct ggctgaactc ggcttagata
    10741 aaccgatgtg gcagcagtat ctccattaca tttggggcgt aatgcacggc gatctaggca
    10801 tttcaatgaa aagccgaatt ccagtatggg aagagttcgt gccgcgcttt caggccacgc
    10861 tggaacttgg cgtctgcgcg atgatttttg ctacggcagt cggtattccg gttggtgtgc
    10921 tggctgcggt taaacgcggt tccattttcg atcacactgc agttggccta gcgctgaccg
    10981 gctactcgat gccgatcttc tggtggggca tgatgctgat catgctggtt tcggtgcact
    11041 ggaacctgac gcccgtctcc ggtcgcgtga gcgatatggt gttcctcgat gactccaatc
    11101 cgttaaccgg ttttatgcta atcgacaccg ccatctgggg tgaagacggc aactttatcg
    11161 atgccgtcgc ccatatgatc ttgcccgcca ttgtgctggg tactattccg ctggcggtca
    11221 ttgtgcgtat gacacgctcc tcgatgctgg aagtgctggg cgaggattac atccgcaccg
    11281 cgcgcgccaa agggctaacc cgcatgcggg tgattatcgt ccatgcgctg cgtaacgcga
    11341 tgctgccggt agtgaccgtt atcggcctcc aggtgggaac attgctggcg ggggcgattc
    11401 tgaccgaaac catcttctcg tggcccggtc tggggcgctg gttgattgac gcactgcaac
    11461 gccgcgacta tccggtagtg cagggcggcg tattgctggt ggcgacgatg attatcctcg
    11521 tcaacttgct ggtcgatctg ctgtacggcg tggtgaaccc gcgtattcgt cataagaagt
    11581 aaggggacat catgtcacag gttactgaaa ataaagtgat tagcgcaccg gtgccgatga
    11641 ccccgttaca ggagttctgg cactatttta aacgcaacaa aggcgcggtc gtcgggctgg
    11701 tttacgtcgt catcgtgctg ttcatcgcga tctttgccaa ctggattgca ccctataacc
    11761 cggcggaaca gttccgcgat gcactgctcg ccccgccagc ctggcaggaa ggcggcagca
    11821 tggcgcactt gctgggcacc gatgacgtag gccgtgatgt gctgtcgcgc ctgatgtacg
    11881 gtgcgcgcct gtcgctgctg gttggctgtc tggtagttgt gttatcgctg attatgggcg
    11941 ttattctcgg cctgatcgcc ggttactttg gcggcctggt cgataacatc attatgcgcg
    12001 tggtcgatat catgctggcg ctgccaagtc tgctgctggc gctggtgctg gtggcaattt
    12061 tcggcccgtc gattggtaac gccgcgctgg cactgacctt cgttgccttg ccgcactatg
    12121 tgcgcttaac ccgcgccgcc gtgctggtgg aagttaaccg cgattacgtc accgcgtctc
    12181 gcgtggcggg tgccggggcg atgcgtcaga tgtttattaa catcttcccg aactgccttg
    12241 cgccgctgat tgttcaggcg tcgctcggtt tctctaacgc cattctcgat atggctgctc
    12301 ttggtttcct cggcatgggg gcacagccgc caacgcctga gtggggcacc atgctctccg
    12361 acgtgttgca gttcgcgcaa agcgcctggt gggtcgtgac cttcccgggt ctggcgatcc
    12421 tgctgacggt gctggcattt aacctgatgg gtgacggtct gcgtgacgcg ctcgatccca
    12481 aactgaagca gtaagaggtt cgagatggcg ttattaaatg tagataaatt atcggtgcat
    12541 ttcggcgacg aaagcgcacc gttccgcgcc gtagaccgca tcagctacag cgtaaaacag
    12601 ggcgaagtgg tcgggattgt gggtgagtcc ggctccggta agtcggtcag ttcactggcg
    12661 attatggggc tgattgatta tccgggccgc gtaatggcag aaaaactgga gtttaacggc
    12721 caggatttgc agcgtatctc agaaaaagag cgccgcaacc tggtgggtgc cgaagtggcg
    12781 atgatcttcc aggacccgat gaccagcctt aacccgtgct acaccgtggg tttccagatt
    12841 atggaagcga ttaaggtgca tcagggcggc aacaaaagta cccgccgtca gcgagcgatt
    12901 gacctgctga atcaggtcgg tattcccgat ccggcatcgc gtctggatgt ttacccgcat
    12961 cagctttccg gcggcatgag ccagcgcgtg atgatcgcca tggcgattgc ctgtcggcca
    13021 aaactgctga ttgccgatga accgaccacc gcgctggacg tgaccattca ggcgcaaatc
    13081 atcgaactac tgctggagct acagcagaaa gagaacatgg cgctggtgtt aattatccat
    13141 gacctggcgc tggtggcgga agctgcgcat aaaatcattg tgatgtatgc aggtcaggta
    13201 gtagaaacgg gcgatgcaca cgccatcttc catgcgccgc gtcacccgta tactcaggca
    13261 ttgctgcgtg cgctgccaga atttgctcag gacaaagaac gtctggcgtc gttgccaggt
    13321 gttgttcccg gcaagtatga ccgcccgaac ggctgcctgc ttaacccgcg ctgcccctat
    13381 gccactgaca gatgtcgcgc tgaagaaccg gcgctgaata tgctcgctga tgggcgtcag
    13441 tccaaatgcc attacccact tgatgatgcc gggaggccca cactatgagt acgcaagagg
    13501 ccacctcgca acaaccgctg ttgcaggcta tcgacctgaa aaaacattat ccggtgaaga
    13561 aaggtatgtt cgcaccggaa cgtctggtga aggcgctgga cggcgtttcg tttaaccttg
    13621 aacgtggcaa aacgctggca gtagtgggcg aatctggctg cggtaaatcg accctcggtc
    13681 ggttgctgac gatgatcgaa acgcccaccg gtggtgagct gtattaccag gggcaggatc
    13741 tgctcaagca cgatccgcag gcgcagaagc tgcgtcggca gaaaatccag attgtcttcc
    13801 agaaccctta cggttcgctg aatccgcgta aaaaagttgg gcaaattctc gaagagccgc
    13861 tgcttattaa caccagcttc agcaaagaac agcgtcggga aaaagccctg tcgatgatgg
    13921 cgaaagtcgg cctgaaaacc gagcactatg accgctatcc gcatatgttc tccggcggac
    13981 aacgtcagcg tatcgctatt gcccgtggtc tgatgctcga cccggacgtg gtgattgccg
    14041 atgaaccggt ctccgcgctg gacgtctcgg tgcgtgcaca ggtgctcaac ctgatgatgg
    14101 atttacagca ggaactgggg ctttcttatg tctttatctc ccacgacctg tcggtggtgg
    14161 agcacattgc cgatgaagtg atggtgatgt acctgggccg ctgcgtggag aagggaacga
    14221 aagaccaaat cttcaataac ccgcgccatc cgtacactca ggcgctactc tccgcgacgc
    14281 cgcgcctgaa cccggacgat cgccgcgaac gcatcaaact caccggtgaa ctgccaagcc
    14341 cgctgaatcc accgccgggt tgcgccttca acgcccgctg tcgtcggcgc ttcggcccct
    14401 gcacccagtt gcagccgcag ctaaaagact acggcggtca actggtagct tgttttgctg
    14461 ttgatcagga tgaaaatcca cagcgttaac tcacaaaacc ggggccatgc gctccggttt
    14521 actcaatcag cttcaacagt ggcgacaagc atagcaaaat gccgtacagc agaatcagcc
    14581 aggctttaaa tccgcgaagt ttttccagtt gtgcgacttt atagatcagg aaaaacggaa
    14641 tgaggcacga cacaatgcca tataacgggc ttcccaactg aaagaacacc agcaccgata
    14701 cacgaaacga aacccaaatc gtcaacgtaa tgacgataaa agcgcagatc gccagagtca
    14761 gcacgcgtga gttaattttc ttggtatcaa taattcggct taacagattg agaataatgc
    14821 ctttaatggc ctcgtggaaa ccgagataaa tgccaaagaa tgcggtcagt acggcaaaga
    14881 tattaagcac cgtagaggtg atatgaatga tatgcccagg gatcacctgc gcggccagcg
    14941 ccagtgccga gatattttgt tcaaaggcag aaacggcttc ttcgtggcta attgagaagg
    15001 taaacgaaaa ggcaaaaaac aggatcaccg cgatgagcgt gatataacta attcggtggg
    15061 tacgcagcgc gagccgggtt gccagtactt tatccgcttc ccgtttacga taggcaatat
    15121 tcattgggtt aagtacctga ataaatactg cagaaaagaa gcaaaatgga atggtaagca
    15181 agacatcgcg gaaaaagacg gaggcttgcg ggaaggcggt tatattggcg aaattccagt
    15241 gcgggatcat cgcaaaaccg aacacgacaa taatccctac tttgaccacc accattggcc
    15301 cggaaatctt aaacagtaat cgttcaccac cagacgcaat cgctaccagt acggcgaaaa
    15361 tagcgacttt ataaagtaga gattgtgaaa gatcggcatc ggttaaaccg aaggttttca
    15421 ggtacgaggc gctgtcgaaa accacggaga gagagtagat aaaaatcccg tggataatca
    15481 tcaaaaagta gataaccccg aggaaaattc cccagttctt ccccaggtaa tgactgataa
    15541 tatcggtgta gtcattacag gaatcgcttt cagaaagggt ttttaaataa atgtcctgca
    15601 ctacccaggt ggcaggataa gcaatgatcg ctgcggtaat aaatacccaa attcccttca
    15661 agccaatttg tactggcatc agcacggttc cggcaccaat cgccatgcct atgcataata
    15721 aaacccagcc gaagtcgtag cgtgtaaacg gcaatttctg attgtgtttc gatagtgtgt
    15781 tgtgctgcat aaagtcctgt ccagaaagaa gtcggcctcg caaaaatgaa taaacccagt
    15841 ttctcttgcg caacaggtgg agaagtcgaa tacgcagtat gtaaaaaatg aggcaacaga
    15901 ttcactgggg aggtcgcgag gaggcgcaat tctacaaaat tgcgcatttc actaccagtc
    15961 tggagtcagc ccggatatga actgcaacta ttgcaaataa agaaattaag ctggaaggca
    16021 tcgcgcaatg aggaagattg ccgggtgctg acagtaaaaa gcaatcgta
//
LOCUS       DAJVTL010000102        16053 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.104, whole genome shotgun sequence.
ACCESSION   DAJVTL010000102 DAJVTL010000000
VERSION     DAJVTL010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16053
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.104"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..157)
                     /locus_tag="OQQ26_003113"
     CDS             complement(<1..157)
                     /locus_tag="OQQ26_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HCS1858482.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLV
                     SLFMGRKR"
     gene            complement(284..889)
                     /gene="osmY"
                     /locus_tag="OQQ26_003114"
     CDS             complement(284..889)
                     /gene="osmY"
                     /locus_tag="OQQ26_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
                     /protein_id="HCS1858483.1"
                     /translation="MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVD
                     SSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEA
                     VKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVE
                     TTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK"
     gene            complement(1282..2868)
                     /gene="prfC"
                     /locus_tag="OQQ26_003115"
     CDS             complement(1282..2868)
                     /gene="prfC"
                     /locus_tag="OQQ26_003115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000202568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HCS1858484.1"
                     /translation="MTSLLAAEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGT
                     VKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTL
                     TAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENE
                     LKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAV
                     GEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAP
                     APMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVR
                     TAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNF
                     APELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVS
                     RLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMV
                     NLRLAQERYPDVQFHQTREH"
     gene            3088..3348
                     /locus_tag="OQQ26_003116"
     CDS             3088..3348
                     /locus_tag="OQQ26_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001217544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="HCS1858485.1"
                     /translation="MRIEICIAKEKMTKMPNGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTTDKDLAKTFVQETLKDTWESADEWFVYSHHK"
     gene            3708..5312
                     /locus_tag="OQQ26_003117"
     CDS             3708..5312
                     /locus_tag="OQQ26_003117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005025120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HCS1858486.1"
                     /translation="MHNFALANKKSPDFISELPQIEPKPYSNGHKIKWINHTLTSTEV
                     TPPDNLIKICILIESGEIAITSVSDIANLLGVPAGQLLYILYRKKDNYRTFEIEKKNG
                     KKRVINAPCGGLSILQTRLKPVLEYFYRPKKSAHGFIKGKSIITNAGMHIKKNFVVNI
                     DLENYFESISFARVYGIFKSKPFNFAHPAATVLAQLCTHNGKLPQGACTSPILANIAS
                     ASLDKQLTQFAGRKKISYSRYADDITFSFNQRNIDIIKKNDDGSYSLSETIDNIISKN
                     GFKINYDKFRVQTRNTRQSVTGLVVNDKVNINRRYIRITRSMIHRWTDDKLKYALLFA
                     TEKGYQAKDNNHAIQIFRNHIYGRLSFIKMVRGKDYPGYLKLMSYMSHNDPLKTQEGL
                     RAMKETENFDVFICHASEDKKDIAIPIYDELTKLKISAFIDHVEIKWGDSLIDKINAA
                     LVKSKYVIAILSANSVNKEWPQKELRAVLASEISSGDVKLLTLLKKEDEEVVNLSLPL
                     LSDKFYMVYDNNPEVVANNIKSLLQR"
     gene            complement(5497..5771)
                     /locus_tag="OQQ26_003118"
                     /pseudo
     CDS             complement(5497..5771)
                     /locus_tag="OQQ26_003118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905001.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(5758..6342)
                     /locus_tag="OQQ26_003119"
     CDS             complement(5758..6342)
                     /locus_tag="OQQ26_003119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000885581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1858487.1"
                     /translation="MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTD
                     IAPPDIPAGFVAVFNSDDASWYLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSP
                     EGEFQKWNGTAWVKDTEAEKLFRIREAEETKNSLMQVASEHIAPLQDAADLKIATEEE
                     NSLLEAWKKYRVLLNRVDTSTAPDIEWPTVPVME"
     gene            complement(6342..9689)
                     /locus_tag="OQQ26_003120"
     CDS             complement(6342..9689)
                     /locus_tag="OQQ26_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415890.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1858488.1"
                     /translation="MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPD
                     EAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSRPGTLNDFLGAMTEDDARPEA
                     LRRFELMVEEVARNASAVAQNTAAAKKSASDASTSAREAATHATDAAGSARAASTSAG
                     QAATSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNAAASQKSA
                     ATSASAATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKT
                     SETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSA
                     STATTKAGEATEQASAAARSASAAKTSETNAKASETRAESSKTAAASSASSAASSASS
                     ASASKDEATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAE
                     DIASAVALEDASTTKKGVVQLSSATNSTSETLAATPKAVKAAYDNAEKRLQKDQNGAD
                     IPDKDRFLSNINVYSKGEVDQKKGMRYVVVNAPAGVQEGKYYPLVIKRNDSHRASRVV
                     ISTPSRTANHRMNNCEFNGFVCAGGWTDRGSYACGMFWAYSSSERAIHSILMSNKGDT
                     VDSVFYIEGGAFPVEVFLEEGLSVTAPASDYVVAETTYKFGATDPYSESVAVNLILDF
                     KQGNGFYSSYPVLSKSDISGNKIYANDEVIVRSQNALRMIAGDYGVIWRNDGANTYLL
                     MTDKGDQYGGWNGLRPFAVNNATGEVTINTPLNSPKGIKGNSDTATKLQTAIKISGVS
                     FDGSTDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTG
                     VGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSD
                     TVPSGYALMQGQTFDKSAYPKLATAYPSGVIPDMRGWMIKGKPASGRAILSQEQDGIK
                     SHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGAHTHSMTFVSGG
                     SSGAPGSGSPDYSKYSVNTSSAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHG
                     HTITVNAAGNAENTVKNIAFNYIVRLA"
     gene            complement(9754..10353)
                     /locus_tag="OQQ26_003121"
     CDS             complement(9754..10353)
                     /locus_tag="OQQ26_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HCS1858489.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLHASTNVPG
                     SDDLNGINMKYRYEFTDTLGLVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKKHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF"
     gene            complement(10420..13818)
                     /locus_tag="OQQ26_003122"
     CDS             complement(10420..13818)
                     /locus_tag="OQQ26_003122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HCS1858490.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPIEGPVDGLKS
                     VLLNSTPVLDTEGNTNISGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRFTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVDNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGSQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCL
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAWLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNAVEVNWIDPNNGWETATELVEDTQAIARYGRNVTKMDAFGCTSRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGIRTGGRVLAVNSQTRTLTLD
                     REITLPSSGTTLISLVDGQGSPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGRERLVSTARTTETTYRFTQ
                     LALGNYRLTVRAVNAWGQQGDPASVSFRIAAPAAPSRIELTPGYFQITATPHLAVYDP
                     TVQFEFWFSEKRITDIRQVETTARYLGTGLYWIAASINIKPGHDYYFYIRSVNTVGKS
                     AFVEAVGRASDDAEGYLDFFKGKITESHLGKELLEKVDLTEDNASRLDEFSKEWKDAN
                     DKWNAMWAVKIEQTKDGKHYVAGIGLSMEDTEEGKLSQFLVAANRIAFIDPANGNETP
                     MFVAQGNQIFMNDVFLKRLTAPTITSGGSPPVFSLTSDGKLTAKNADISGSVNANSGT
                     LNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPSTNSYASGTITVRISDDQKFDRQV
                     MIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMP
                     AGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS"
     gene            complement(13879..14487)
                     /locus_tag="OQQ26_003123"
     CDS             complement(13879..14487)
                     /locus_tag="OQQ26_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019843089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HCS1858491.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLND
                     GWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVA
                     WWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTSTAASTDNGKQNTYFSSLDN
                     MVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            complement(14424..15167)
                     /locus_tag="OQQ26_003124"
     CDS             complement(14424..15167)
                     /locus_tag="OQQ26_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1858492.1"
                     /translation="MTETESAILAHARRCAPAESCGFVVRTPEGERYFPCVNISGEPE
                     EYFRMSPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGEIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRNGQNLYLDNLEAT
                     GLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHRAWHASAFTGICNDLAAASTFV"
     gene            complement(15173..15871)
                     /locus_tag="OQQ26_003125"
     CDS             complement(15173..15871)
                     /locus_tag="OQQ26_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HCS1858493.1"
                     /translation="MQDIPQETHHETTRLTQSAQVVLWEIDLTEVGGERYFFCNEQNE
                     KGEPVTWQGRQYQAYPIQGTGFELNGKGSAARPTLTVSNLHGMVTGMAEDLQSLVGGT
                     VVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLATPTETDG
                     AVFPGRIMLANTCTWTYRGDECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNV
                     GNFGGFLSINKLSQ"
     gene            complement(15881..>16053)
                     /locus_tag="OQQ26_003126"
     CDS             complement(15881..>16053)
                     /locus_tag="OQQ26_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1858494.1"
                     /translation="EHPSLKAFLERHGGVRAFQWTPPYDWKPIRVVCRKWSASVGALW
                     VTITADFEQVVA"
BASE COUNT         3867 a         4359 c         3751 g         4076 t
ORIGIN      
        1 gtcgttttcg gcccatgaac aaactcacca ggaacagaat aatcccgacg acaaagacaa
       61 ttttagctgc gcctgcagcg gtaccggcca gaccaccaaa cccaagtgcg gcggcgatta
      121 acgcgataac cagaaatatg atgccccaac gaaacataag cgtctccttt accatagtta
      181 atgtcaccgc ttgatatgag cgtgaaaatc actcaatgcg atatttttag tgtggtgcac
      241 atcgcgcctc ccgacaaagt tcgggaggac gaattacgac gaattactta gttttcagat
      301 catttttaac gcttttcaca ccatctaccg ctttggcgat actttcagca cggtcgctct
      361 gtgcctggga atcgacggta ccggagagct gaaccacgcc gtcggtggtt tcaactttca
      421 catgacggga agggacgata tcgtccgcca gcagtttggc tttgatttca ctggtggtgg
      481 cggtgtcacc cgcgtagccc ttcacagagc cttctttagc gtcgcgaacg tgcagtttgt
      541 cgctgacaga ggtcacccct tcaacgcctt tcgccacttt cactgcctct tcggcctgag
      601 cctggctttc aacgaaaccg ctcagggtca cgactttttg atcggttttg acagagatat
      661 cggtgctctt gatgttgtca tgatccacca gcgccgcctt cactttcgcg gtgatggcgc
      721 tgtcatccat gaaattaccg actttattca tagagctatc gactttttgc cctgcgcttt
      781 cattggtagt ctgtgcgttg ttttccgcgt aggcagagcc ggtcgcgacg gcagaggtca
      841 acattacagc cagcagagtt ttcgaaatct tcagtcttgt catagtcatc gatttattcc
      901 tgtatgtttg ctcgtaattt gagcctggca acacgaggtt gcattgctga atagggagag
      961 acttcaccct ctacagaagt caatggtcgc catcacaaaa gcgatgggtg atgaataacg
     1021 accattacag cctctgaatc agttattaat atcggtagaa tgacaatcga cggctttaga
     1081 tactgatatc tacgcattga acggtattta acgccgtcag aaatgtcatt actttgttaa
     1141 atatagatca caattttgaa accgctcggg atatcagcga aaacataagc aaaagtgaat
     1201 gttttaagaa cattccgtaa tcggctaata aggaagggaa attgacaggg cgcagcggct
     1261 accgcgccct ggaggcaaga attaatgctc gcgggtctgg tggaactgaa cgtccggata
     1321 acgttcctgc gccaggcgca ggttgaccat gctggtagcg atgtaagcga ggttatcgcc
     1381 gccatcaagc gccagttggc tttcgttctt acgcttgaac tcttcgaatt tcttcgcgtc
     1441 cgcacattct acccagcggg cagtggcaac gttgactgat tcatatactg cttcaacgtt
     1501 gtattcgctc ttcaggcgcg ataccaccac atcaaactgc agcacaccaa ctgcaccaac
     1561 gatcaaatcg ttgttggaga tcggacggaa cacctgcacc gcgccctctt cggaaagctg
     1621 taccagccct ttgagcagct gtttttgctt cagcggatct ttcaggcgga tacgacggaa
     1681 cagttctggt gcgaagttcg gaataccggt gaacttcatc atctcaccct gggtaaaggt
     1741 gtcgccgatc tgaatagtgc cgtggttgtg cagaccaagg atatcgccag gatacgcttc
     1801 ttcaacgtgc gaacggtcac ccgccataaa ggtcagcgcg tcggagatca ccacatcttt
     1861 cgcagtacgc acctggcgca gcttcatgcc tttttcatat ttaccggaca ccacacgcat
     1921 aaacgccacg cggtcgcggt gtttcgggtc catgttggcc tgaattttaa atacgaagcc
     1981 ggtaaatttg tcttcgctcg cctctacggt acgggtatca gtctgacgcg gcatcggcgc
     2041 aggcgcccac tccaccaggc catccagcat atgatcaacg ccgaagttac ccagcgcagt
     2101 accgaagaat accggagtga tttcgcccgc aaggaacagt tctttgtcga actcgttaga
     2161 cgcgcctttc accagttcca gttcgtcacg tagctgctgt gccagatctt caccaaccgc
     2221 agcgtcgaga tccgggttat tcagcccttt aacaatgcgg acttcctgaa tggtgtggcc
     2281 tttaccgctc tgataaagat aggtttcgtc tttataaagg tggtaaacgc ctttaaacag
     2341 cttgccgcag ccaatcggcc aggtgatcgg tgcgcagccg attttcagct cgttctcaac
     2401 ttcatcgagc agttccatcg ggtcgcggat atcacggtca agtttgttca taaaggtgag
     2461 gatcggcgtg tcgcgcagac gggtaacttc catcagcttg cgggtacgat cttcaacacc
     2521 ttttgcggcg tcgataacca tcaggcagca gtccaccgcc gtcagggtac gataggtatc
     2581 ttccgagaag tcttcgtgcc ccggggtgtc gagcaggtta accaggcaat cgtgatacgg
     2641 aaactgcatc acagacgtag taatggaaat cccacgctgc ttttccatct ccatccagtc
     2701 cgacttagcg tgctggttgg aaccacggcc ttttactgta ccggcggtct gaatggcctg
     2761 tccgaacagc agcaccttct cggtgatggt agttttacct gcgtccgggt gagaaataat
     2821 tgcaaaggtt cttcttttcg ctacctctgc ggccaaaagg cttgtcataa ttgttgtctc
     2881 tttgattatg tacaatcata tgtacaaaga aaaattcatg ccgctgattg tacattttgg
     2941 aggtatcaga gcatagcaga acatgatcag taggtgtatt tgtagccaaa gaacatttgt
     3001 acatgcagca atctttgctc tattgatact gtttatttat acagttaaaa ataatgctgt
     3061 atgcaaacac agtgtagagg gagttttatg cgtattgaga tctgcatagc caaagagaaa
     3121 atgactaaaa tgccaaacgg tgctgtggat gcgttaaagg aagaattaac ccgacgcatc
     3181 agtaagcgtt atgacgatgt agaggtgatc gtaaaagcca ccagcaatga tggcctttct
     3241 gttacgcgca ccactgataa agatttagct aaaacttttg ttcaggaaac tctgaaagat
     3301 acctgggagt ctgctgacga gtggtttgta tactcccacc ataaatgaag ttaatgacta
     3361 ttgtgagcga gaaacgcgct actactatat atagacagac aagatgcact tactgaataa
     3421 atactcataa cggagaaacc agctgtatag tgaacaatag atttccagta gcatattttt
     3481 acttcacttt tagttattaa tatgataatc ataaactacg gctctgcctt aaatttgtga
     3541 ggttgtttcg cctcgaagga actaatgtta ggacatacgc caccgttcag tcgatggtaa
     3601 cgcttcttaa ctagtggtcc gctaagtgat gcgcaaagtg attgggcaga gccgaaacgt
     3661 ttacaatccg ataggagttg gttttgtcgc tacatgataa attattaatg cataacttcg
     3721 cattagccaa taaaaaaagc cctgacttca tatctgaact tcctcaaatt gaacctaaac
     3781 catacagcaa tggacataaa attaaatgga taaaccacac acttactagc actgaagtta
     3841 ctccccctga taacctgatt aaaatatgca tattgattga gtcaggggaa attgctataa
     3901 catcagtaag tgatattgcc aatttacttg gagttcctgc tggccaatta ctttatatac
     3961 tatatcgtaa aaaagataat tatcgtactt ttgaaataga aaagaagaat ggtaaaaaaa
     4021 gagtcattaa tgctccttgt ggcggtctat cgatactcca aacgagacta aagcccgttc
     4081 ttgaatattt ctacaggcca aagaaatctg ctcatggttt tataaaagga aagagcatca
     4141 ttactaatgc tgggatgcat attaaaaaaa attttgtcgt aaacattgat ctagaaaact
     4201 atttcgaatc aataagtttt gctagggttt atggaatatt taaaagtaaa ccttttaatt
     4261 ttgctcatcc tgcagctact gttttagctc agttatgtac tcacaatgga aaattacctc
     4321 aaggtgcgtg tacatcgcca atattagcaa atattgcatc agcttctcta gacaaacagc
     4381 tcacccaatt tgcaggaaga aaaaaaatat cttattctag gtatgctgac gacataactt
     4441 tttctttcaa tcagagaaat attgatataa tcaaaaaaaa cgacgacgga agttatagtc
     4501 ttagtgaaac tatagacaat attatttcaa aaaatggctt taaaataaat tatgataaat
     4561 ttagagttca aaccagaaat acaagacaaa gtgttactgg cttagtggtt aatgataaag
     4621 ttaacattaa cagaagatat ataagaatta cacgttcaat gattcataga tggacagatg
     4681 ataagctaaa gtatgcactt ctctttgcta cagaaaaagg atatcaggca aaggataata
     4741 accacgcaat tcaaattttc cgaaatcata tttatggaag gcttagcttt ataaaaatgg
     4801 ttagagggaa agactatcca ggatatttaa aactgatgtc atacatgagt cataacgatc
     4861 cattaaaaac ccaagaagga ttgcgagcaa tgaaagaaac agaaaacttt gatgttttta
     4921 tatgccatgc aagcgaagac aaaaaagaca ttgcaattcc aatatatgac gagttaacta
     4981 aacttaaaat ttcagccttc atagatcatg ttgagataaa atggggcgac tccttaattg
     5041 ataaaataaa tgcagcacta gttaaatcaa aatatgtcat cgctatttta tctgctaatt
     5101 cagtcaataa ggaatggcct caaaaagaat taagagcagt tttagccagc gaaatatcga
     5161 gtggcgacgt aaaacttttg accttattaa aaaaagaaga cgaggaggtc gtaaacctat
     5221 cattaccttt acttagtgat aagttttata tggtctatga taataatcct gaagtagtcg
     5281 ccaacaatat taaatcactc ttacaacgat aattctctca caaaagaaaa tgtgcagatt
     5341 gatgcgtatt aagtattaat ctgcacatac aaaaaaaata ataaaataat acatttttca
     5401 taacttgtag gtaacaacaa tatatgtcgt aacgaatatt tggataacct ctatacccta
     5461 ttaaccaacc aattaactct atgtaatctc gcagcctcaa aacccgacta ttgttctctt
     5521 aacagtcagt tcacgttcca ttccggcctg agccccataa catggaagaa aaaacgcccc
     5581 cagtcagtcc agctttcaga caatcagtgt gtcacctgcc gataatattc tgagtagttt
     5641 tttcagccca ggcctttcgg actttgtacc actgatttta tcttcaaaat cagcgcgcat
     5701 tcttcgtaat ccagcaaact cttgtatatg acgttattat ggctacagca gtaacgatta
     5761 ttccataaca ggtactgtag gccactcaat atccggtgca gttgatgtgt caacacggtt
     5821 cagcaacacc cgatactttt tccaggcttc cagcaacgag ttttcttcct ccgttgcgat
     5881 tttcagatct gcagcatcct gaagcggcgc aatatgctca ctggctacct gcatcaggct
     5941 gttttttgtt tcttccgcct cccggatccg gaacagtttt tctgcttccg tatccttcac
     6001 ccaggctgtg ccgttccact tctgaaactc cccttccgga gataaccagg tgacattttc
     6061 cggtaacgga ccgagttcag aaataaataa cgcgtcccct gatgccacgt cataaactgt
     6121 tttaccccga tggtcttcaa caagatacca cgatgcatca tcactgttga aaacagccac
     6181 gaagccagcc ggaatatctg gcggtgcaat atcggtactg tttgctggca gacctgtatg
     6241 aggcggaata tatgcgtcac cttcaccaat aaattcatta gttccggcca gcagattata
     6301 aatttttatg gtccgtgctt gttcactcat tctgaatgcc attatgcaag cctcacaata
     6361 tagttaaatg cgatgttttt gacggtgttt tccgcgttac cagcagcgtt aacggtgatg
     6421 gtgtgtccat gtgaaccaat cgcaaccgag tgcgtatgcg caccaatacc tacagtatgt
     6481 gcgtgtgcac ctgcgcttgc agcagtaccc gatacagagt gcgtatgagc gcctgcagaa
     6541 gaagtgttaa cactgtattt agaataatca ggtgatccac ttcccggagc accactggaa
     6601 ccacctgaaa caaatgtcat cgaatgggta tgtgcaccgg ctgaagcagc cgtaccgcta
     6661 acactatggg tatgcgcccc ggtgttattc gtggatttag tgccgtaatc aaacgacgat
     6721 gtggttttcg tacccaaatc cgtactggat gcgctggcgc tgtgggtgtg cgatttaatg
     6781 ccgtcctgtt cctgagacaa tatggctcga ccactggcgg gcttgccctt aatcatccag
     6841 ccacgcatat cagggatcac gcctgacgga taagcagttg caagtttcgg gtaagcagat
     6901 ttgtcaaaag tctgcccctg catcagggca taaccagacg gaacggtatc tgatggccac
     6961 gggattggtg cgccgactgg gtagctttct ggtggaagat ttttcgaggt ataaacttct
     7021 gcccagtctt cctcaaaacc ataaccgtct cttgaagaac ggtagaacag accaccattt
     7081 ctgtaatgcg ccttcatctg caaggtccgg caacttccga ctccggtata gaagttaacc
     7141 agaatatagc tgtcgccaga gcgggtgaca ttataagcgc ctgattcggc attccaggga
     7201 acgcccccat ccgcatcggc atacgtatcc gttgctcttc tggcaaaagc agcaacatgc
     7261 gcagcggtta aagtgatatc agtagaacca tcaaacgaaa caccagatat ttttattgct
     7321 gtctgaagtt tcgtagctgt atcagaattt cccttaatcc ccttaggcga attaagtggt
     7381 gtattgatcg tcacttcacc tgttgcgtta tttacagcaa atggtcgaag accgttccag
     7441 ccaccgtact ggtcgccttt atcagtcatg agcaagtaag tatttgctcc atcatttcgc
     7501 catatgacac cgtaatcgcc tgcaatcatc cttaacgcgt tctgactacg gacaataact
     7561 tcatcattag cgtaaatctt attcccgcta atatctgact tactcaaaac aggatacgaa
     7621 ctataaaatc cattaccttg tttaaaatct aaaattaaat ttacagcaac tgattcagaa
     7681 taaggatcag ttgcaccaaa tttataagtt gtttcagcaa caacataatc agaagcaggt
     7741 gcagtaacgg agagtccttc ttctaaaaaa acctctacgg gaaatgcccc accttctata
     7801 tagaatacgc tgtctacggt atcgccttta ttactcatca gaatggaatg aatagcgcgt
     7861 tccgatgatg aataagccca gaacatacca caggcatagc taccccggtc cgtccagccg
     7921 cctgcgcaaa caaaaccatt aaactcacag ttattcattc tgtgattagc tgtgcgactt
     7981 ggcgttgaaa tgacaacgcg ggatgctcga tggctgtcat tcctttttat cactaacgga
     8041 taatatttac cttcctggac acccgccggg gcatttacca caacgtatcg catccccttt
     8101 ttctgatcca cttcaccttt gctgtaaaca ttaatgttac tcaggaagcg gtccttgtcg
     8161 ggaatatcag caccgttctg gtctttctgc agacgtttct ctgcattgtc ataggctgct
     8221 tttactgcct ttggcgttgc cgccagcgtt tcagacgtgc tgttggtcgc actgctgagc
     8281 tgtactaccc cctttttcgt cgtgctcgca tcctcaagcg ccacggcgga tgcaatatcc
     8341 tctgcacgtt ttgccgctgt ctcagcgcgc gttgccgcgg attccgccgt acttttgctc
     8401 tgtgctgccg ccgtcgcact gccagctgcc tctgtcgcct tcgtggatgc tgtcgtggcg
     8461 ctgcccttcg ctgctgacgc ctgtctggtc gcctcatctt ttgaagcaga cgccgatgat
     8521 gccgatgacg ccgccgaact ggctgacgat gcggcagccg tttttgagga ttctgcacgg
     8581 gtttccgacg ctttcgcgtt cgtttcggat gtcttcgctg cggaagctga cctcgctgct
     8641 gcgctggcct gttcagtggc ttcgccagcc ttcgttgtgg ctgttgaagc ggacgacgcg
     8701 gcactttctg ccgactttcc ggcagcggtg gcactggctg aggcctgccc ggcacttgtt
     8761 gatgcggcac tggcagatga tgcagccgct gtttttgagc ctgccgcagc tgaggcactc
     8821 tgtcccgctg ccgtttcaga agacctggcg ttcgtctcgg acgtttttgc cgccttcgcg
     8881 gaatttcctg ccgccgttgc cgaggaagcg gcactactgg cgcttgatga tgcgttcgtt
     8941 tctgatgatt tcgctgcctc ttttgaggcc gccgcatccc gggctgaggt ggcagcttct
     9001 gacgcctttg tggtcgctgc ggatgcagaa gtggctgcag atttttgtga cgctgccgca
     9061 ttcgtttctg acgttttcgc cgcaccggca ctggtagctg ccgcgctttt tgaggactct
     9121 gcagcggcag cactttttga ggcttcagtg gcctttgttg atgccgttcc tgcgctggaa
     9181 gacgctgact gagccgacgt cgcggcctgc ccagctgatg tgctggctgc gcgtgctgag
     9241 cctgcagcat cagtcgcatg ggttgccgcc tcacgggctg atgtgctggc atcactggct
     9301 gacttcttcg cggctgccgt gttctgtgcc accgcggacg cgttacgcgc cacctcttcc
     9361 accatcagtt caaaacggcg cagtgcctca ggacgggcat catcctccgt catggcaccg
     9421 agaaaatcat tcagcgtacc gggtcgggaa tcttcataca cggtgatggt cccggcatgt
     9481 gacggcggga atccctccac caacagaata acgctgtact gcccgtactc aacgtccatg
     9541 ctgtaacgcc cggcttcatc cggattttct gaggccagcg tgttcaccac caccgtggtg
     9601 ctgttacgtt ttgctttcag ctggattgtg cagttctgta ccggttttcc tgtgccgtct
     9661 ttcagtacac ctgaaatctt tactgccata ttcaccccac aaaaaagccc gcctgaaccg
     9721 gcgggctgtc ataacactgt gttacctggc taatcagaat ttataaccga cacccacgat
     9781 gaaaccgtca gtgcgccagt caccactgcc ggagccttca taagcaatat caatggccac
     9841 ggattcggtc gggttaaact gcacgccagc cccccacgcc agagacgtgt tgctgtggcg
     9901 accgtcatca cttccggtca gcacatcgtg ctttttcccc ttgttgtcag ttacgcgaag
     9961 ataatccccg gagaaagtcg acacacggct gtaagctaca cccgccatcg catacgcgct
    10021 gaaccattca ttcacgcgca cagacggccc cgccattacg ctgaaccagc ggttacgaac
    10081 ggaatcttca tgccagcggg tatcgctgta acgggtcagc tggcgattct tgtctcctgc
    10141 atagctgaat gacgtcacca gccccagtgt gtccgtaaac tcataacggt atttcatgtt
    10201 aatcccgttc agatcatcac tgccggggac gttcgtcgag gcatgaagat accccgcgct
    10261 cagcgtggac tgatgttcag acgcccatgc aggcgcaccg gatacggcca gacaaatggc
    10321 tgcggacaaa attgctgcac aaactttacg cataattacc tctcgctttt ctgcaataaa
    10381 aaaggcgcca tttctggcgc ccgttctggg ttataaaatt cagctgatac tgatgcctgc
    10441 tgtggatttt ttcatcacca caaccagcag atcgctgata ctggttgttg gtgtccagtt
    10501 attcgctcct gatgaagata cggtgaatgt cagtgtcagc gtcccctgtc cggcaggcat
    10561 atctataact gaggaaaata cgccctgagc atccgtcgtg gactgattaa aaatctcctg
    10621 accattgcgg gtcactctta accggcaggt tgaataccag tatgactgtt ggttattact
    10681 gttgaaattc tcatgcttac caccgcggaa taacactggc ggtatcatga cctgccggtc
    10741 aaatttctga tcatcactga ttcttaccgt gatggtgcca ctggcataac tgttcgtgct
    10801 ggggaaagac ttgctgaccg ttttgacaat atcgccttca atctgattgg ctgacagttt
    10861 ccccttaatc tgacagttct cattaatcgt gacgttgttg agcgtcccgg agttcgcatt
    10921 cacactacca ctgatatccg catttttagc ggtcagcttt ccgtctgatg tcagggaaaa
    10981 taccggagga ctgccaccgc tggtaatggt gggggccgtc aggcgtttca ggaacacgtc
    11041 gttcatgaat atctgattgc cctgcgccac aaacatcggc gtttcattcc cgtttgccgg
    11101 gtcaataaac gcgatacggt tagcggcaac cagaaactgg ctcagtttgc cttcctccgt
    11161 gtcctccata ctgaggccaa tacccgcgac ataatgtttg ccgtctttgg tctgctcaat
    11221 tttgacagcc cacatggcat tccatttatc gttggcatcc ttccactctt tcgaaaactc
    11281 atccagtctg ctggcgttat cctccgtcag atcaactttt tccagcagct ctttaccgag
    11341 atgggattcg gttatcttgc ctttgaaaaa atccaggtaa ccttccgcat catcgctcgc
    11401 ccgaccgacg gcctccacga atgccgattt gccaacggtg ttcacactgc ggatataaaa
    11461 gtaataatca tggcccggtt tgatattgat actggcggct atccagtaca gccccgtgcc
    11521 aagatagcgg gctgtggttt caacctgcct gatatcggta atccgctttt ccgagaacca
    11581 gaactcaaac tgtaccgtcg ggtcataaac ggcaagatgc ggcgttgcgg ttatctgaaa
    11641 atagcccggc gtcagctcaa tccgcgacgg tgctgccggt gcggcaatcc ggaacgatac
    11701 cgacgccgga tcgccctgct gcccccacgc atttactgcc cggactgtca gcctgtagtt
    11761 ccccagagcc agttgtgtga agcggtaagt ggtttccgtc gtccgggccg tgctgaccag
    11821 ccgctcacgg ccgtcatccg ctgccacggt caggcgaagc aggaagctca cgcccttcac
    11881 caccttcggc gtgtcccagc gggccagcac ctggtattcc ccgctgtctg cggtgacttc
    11941 tgcggtcagg tgctgcaccg ctggcggcgt gacaccattt accgtgccgc tctggtcgcc
    12001 gtcaaagtgc gccccgttat ccacgatggc ctctttttcc ggtacatgct gcacggcggt
    12061 gatggcatac gtgccgtcgt cgttctcacg gatactcacg cagcggaaca ggcgctggcg
    12121 caacgtcggc agcttcagcc cccatacgct gtattcagca acgccgtcag gaacacggct
    12181 cactttcacc ttcacgccgt cggtgacgga ctgaacctcc acgctgaccg gactcccctg
    12241 cccgtcaacc aggcttatca gcgtggtgcc ggaagatggc agcgtgattt cacggtcgag
    12301 cgtcagcgtc cgggtctggc tgtttaccgc cagcacgcgc ccgccggtgc ggataccggc
    12361 atagtcatca tcgcagattt caatgacatc gcccggtaca tggcgaagcc cttcggcacc
    12421 cacgctgaag tccacggtct gcgtttccag cagttctgtt ttaatcagcc acagcccggc
    12481 gcggtgtgcc tgcccccggc tggtacagcc aaaagcatcc atcttcgtga cgttacgacc
    12541 gtaacgggca atggcctgcg tgtcctccac aagctctgtc gccgtctccc agccgttatt
    12601 cgggtcaatc cagttcacct caacggcatt atggcggtcc ttcagggcgc tgaagctgta
    12661 gcggaacggc gcaccatcat ccggcatcac cacattactg cggttatagg tccacacctt
    12721 atctgatggt cggtcctgca cgaacgtcag cgtctgcccg ttccataccg gcatacagcg
    12781 catcgccgag cagaaatcac tgagcacatc ccacgcctta cgctgcgtgg tcagccaggc
    12841 attacaggtg atgcgcggct ccgtgccgcc aaagccgtcc ggcaccgact ggtcgcagta
    12901 ctggccgatg acgtacagcg cccatttatc cacatccgcc gcaccaagac gttttcccat
    12961 gccgtagcgc ggatgggtca gcatatccca cagacaccag gccatgttgt tgctgtatgc
    13021 tggcttaaac gttccgtccc agataccgct gtattgccgc gtctgcgggt tatagttcga
    13081 cggcacctgc agaatgcgcc cgcgcagatg ataattacgg ctcacctgct ggctgccgaa
    13141 ctgctccgag tccacctgca cgccgaccag tgccgtgttc gggtagcact gtttcacatc
    13201 gataatttcg gtgtatgacg accagagcgt tttgttctgc agctggtctg tggtgctgtc
    13261 cggcgtcatc ctgcgcatcc ggatattaaa cgggcgcggc ggcaggttat ccaccaccac
    13321 cgaggccaga tactgtgaag tggttttgcc cttaatggtg atgtcttttt ctgtcaccca
    13381 gccaccgtta cgttgtatct gaaccagcag gcggacttcc gacggattcc ggtccccctt
    13441 tgaggtggtt tccaccagtg cctgcacgcc gaaggtaaaa cgcaatcggt caatgtttgc
    13501 cgacgtgatg gtccgggtga tcggcgtgtc gtatttcact tccgtaccca gcaccgtctc
    13561 ggagccggag gattcaaatc cctccggcgg agtctgctcc tgctcacctg cccggaacac
    13621 caccgtgaca ccggagatgt tggtattccc ctcagtgtcc agcaccggcg tactgttcag
    13681 cagcacgctt tttaatccat ccaccggacc ttcaatcggc ccttcactga tggcatcaat
    13741 cacactcagc aactgcgtgg atttcaggtt gtccttcgct tcgcgcgggg tatgcccctt
    13801 actgctgcct ttacccattc gtcatgctcc ataaacgaca aaaccgcccg gaggcggttt
    13861 cacataaaac attttgcatc agcgaccaat caccacaacc tgaccaccgt ccccttcgtc
    13921 tgccgtgctg atctcctgag aaaccacccg cgaccccaca cgcatttcac cgtacagaac
    13981 aggcaaaaca ttgccctgag caaccatgtt atccagtgag gaaaaatagg tgttctgttt
    14041 gccgttatct gtactggctg ccgtggacgt cctggctttc ggtgccagca tctgcgccac
    14101 accgcccagg atcatactgg cccctgccgc atacatgccc gatacagccg cggcacccag
    14161 ccagcccaca gggttccacc atgccaccgc aatcaacgcc gcccccagca ccacctgaaa
    14221 cacaccgcca cttttagctc ccgccagacg cggcacgata tggatcacgg caccatttgc
    14281 cagcggctca ttaagacggg cagataattc ggtttcacct gcatcacgcc cggcaatgcg
    14341 cacctgatac cagccgtcat tcagtttctg acgaaacgcc gggagctgtg tggccagcgc
    14401 ccggatggct tcggcccccg ttttcacacg aaggtcgatg cggcggccaa atcgttgcaa
    14461 atccccgtaa aggcagatgc gtgccatgcc cggtgacgcc agagggagtg tgtgcgtcgc
    14521 tgccatttgt cggtatacct ctctcgtttg ctcagttgtt caggaatatg gtgcagcagc
    14581 tcgccgtcgc cgcagtaaat agcggcatga ttcggcaccg atgaaccaaa acagcacagc
    14641 agcacatcgc ccggctgcgc cgctgacaac ggcacctgat acagccctgt ggcctccaga
    14701 ttatccagat agagattctg accgttacgc caccagtcat ccccgcgatg aaaatccggc
    14761 atctcaatcc ccgccagatg gtaagcatcc cggaacagcg tgtaacagtc cgtcaccccg
    14821 tgctcaaagc gccgcccggt gagatgcggc acacagcgga atttatgaat ctcaccccgg
    14881 cagaccagcc accacggcaa atcactctgc acctgcagcc gccggtcagc ctcactcagc
    14941 cagggcagac caccggggtg gctgtggacc agcgccacaa tctcaccctg catttctgcc
    15001 cgcagccagt cctccggcga catccggaaa tactcctccg gctcaccgga gatattcacg
    15061 cagggaaaat atctttctcc ctccggcgtt ctcaccacga agccgcacga ctccgctggc
    15121 gcacatcgcc gggcgtgcgc cagaatcgct gattctgttt ctgtcatggg atttactgcg
    15181 aaagtttgtt aatggaaagg aagccgccaa agttgccgac gttattgcgg aacttacaac
    15241 cgctcaggca tttgctgcat ttatccttcg tgatatcgga cgttggctgg tcatattcat
    15301 ccgcgaccgc cggaccgtga taaccgcact catcgccgcg ataggtccag gtgcaggtgt
    15361 tggccagcat gatacgtccc ggaaaaacag cgccgtccgt ttccgtcggc gtggccagta
    15421 caaaagaggc actgaccgcg ctcagttcgc tgcactgctc gatgcgccag cggctgatca
    15481 cctcctgctc cgggtcggcg tcactgtttc cgttgacgaa gttcaccgca tccagaaaac
    15541 gggcgtaaac cttacgccgg accaccgttc cgccgaccag actctgcaga tcttccgcca
    15601 tcccggtgac cataccgtgc aggttagaaa ccgtcagtgt cggacgggca gcactgccct
    15661 tgccgttcag ttcaaatcct gtcccctgaa tggggtatgc ctgatactgc cgcccctgcc
    15721 aggtaaccgg ctcacctttt tcgttctgct cattacagaa aaaataacgt tcaccaccga
    15781 cctctgtcag atcgatttcc cagagcacca cctgggctga ctgagtgagg cgtgtcgtct
    15841 catgatgtgt ttcctgtgga atatcctgca tcagagcctc ctatgccacg acctgttcaa
    15901 aatctgccgt tatggttacc cacagcgccc ccacgcttgc cgaccattta cgacaaacca
    15961 ccctgatcgg tttccagtca taaggtggcg tccactgaaa tgcacggacg ccaccgtgcc
    16021 gttccagaaa ggcttttaaa gatgggtgtt cac
//
LOCUS       DAJVTL010000103        15926 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.105, whole genome shotgun sequence.
ACCESSION   DAJVTL010000103 DAJVTL010000000
VERSION     DAJVTL010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15926
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.105"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..174)
                     /locus_tag="OQQ26_003127"
     CDS             complement(<1..174)
                     /locus_tag="OQQ26_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
                     /protein_id="HCS1858495.1"
                     /translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
                     WHGTPYRYGGMTRR"
     gene            complement(252..1001)
                     /gene="btuD"
                     /locus_tag="OQQ26_003128"
     CDS             complement(252..1001)
                     /gene="btuD"
                     /locus_tag="OQQ26_003128"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HCS1858496.1"
                     /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
                     RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
                     RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEP
                     MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
                     EVLTPPNLAQAYGMNFRRLDIEGHRMLISTI"
     gene            complement(1001..1552)
                     /gene="btuE"
                     /locus_tag="OQQ26_003129"
                     /pseudo
     CDS             complement(1001..1552)
                     /gene="btuE"
                     /locus_tag="OQQ26_003129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707404.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional thioredoxin/glutathione peroxidase"
     gene            complement(1615..2593)
                     /gene="btuC"
                     /locus_tag="OQQ26_003130"
                     /pseudo
     CDS             complement(1615..2593)
                     /gene="btuC"
                     /locus_tag="OQQ26_003130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416226.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
     gene            complement(2694..2993)
                     /gene="ihfA"
                     /locus_tag="OQQ26_003131"
     CDS             complement(2694..2993)
                     /gene="ihfA"
                     /locus_tag="OQQ26_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HCS1858497.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
     gene            complement(2998..5385)
                     /gene="pheT"
                     /locus_tag="OQQ26_003132"
     CDS             complement(2998..5385)
                     /gene="pheT"
                     /locus_tag="OQQ26_003132"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HCS1858498.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG
                     VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
                     RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
                     VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
                     CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI
                     DITSEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
                     EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
                     VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGALESV
                     LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            complement(5400..6383)
                     /gene="pheS"
                     /locus_tag="OQQ26_003133"
     CDS             complement(5400..6383)
                     /gene="pheS"
                     /locus_tag="OQQ26_003133"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HCS1858499.1"
                     /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DATRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
     misc_feature    complement(6592..6716)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01859"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Phe leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01859"
     gene            complement(6666..6710)
                     /gene="pheM"
                     /locus_tag="OQQ26_003134"
     CDS             complement(6666..6710)
                     /gene="pheM"
                     /locus_tag="OQQ26_003134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pheST operon leader peptide PheM"
                     /protein_id="HCS1858500.1"
                     /translation="MNAAIFRFFFYFST"
     gene            complement(6833..7189)
                     /gene="rplT"
                     /locus_tag="OQQ26_003135"
     CDS             complement(6833..7189)
                     /gene="rplT"
                     /locus_tag="OQQ26_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HCS1858501.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     gene            complement(7242..7439)
                     /gene="rpmI"
                     /locus_tag="OQQ26_003136"
     CDS             complement(7242..7439)
                     /gene="rpmI"
                     /locus_tag="OQQ26_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HCS1858502.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            complement(7536..8078)
                     /gene="infC"
                     /locus_tag="OQQ26_003137"
     CDS             complement(7536..8078)
                     /gene="infC"
                     /locus_tag="OQQ26_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HCS1858503.1"
                     /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLRDALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            complement(8082..10010)
                     /gene="thrS"
                     /locus_tag="OQQ26_003138"
     CDS             complement(8082..10010)
                     /gene="thrS"
                     /locus_tag="OQQ26_003138"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006894721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HCS1858504.1"
                     /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
                     VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSIL
                     DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
                     IEKLQQEIRSRSLKQLEE"
     gene            10533..12432
                     /gene="espL1"
                     /locus_tag="OQQ26_003139"
                     /pseudo
     CDS             10533..12432
                     /gene="espL1"
                     /locus_tag="OQQ26_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310454.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector EspL1"
     gene            12605..12712
                     /locus_tag="OQQ26_003140"
     CDS             12605..12712
                     /locus_tag="OQQ26_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588455.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858505.1"
                     /translation="MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG"
     gene            complement(12765..13523)
                     /locus_tag="OQQ26_003141"
     CDS             complement(12765..13523)
                     /locus_tag="OQQ26_003141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HCS1858506.1"
                     /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGG
                     RSRFNLTDYDYLFGLASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DKYTDNASETQPLGYVSGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF
                     GLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYSM"
     gene            13810..14739
                     /gene="pfkB"
                     /locus_tag="OQQ26_003142"
     CDS             13810..14739
                     /gene="pfkB"
                     /locus_tag="OQQ26_003142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707391.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HCS1858507.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
                     ARAIAHLGGSATAIFPAGGATGEHQVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
                     QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQNQG
                     IRCIIDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
                     KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
     gene            14840..15130
                     /gene="ghoS"
                     /locus_tag="OQQ26_003143"
     CDS             14840..15130
                     /gene="ghoS"
                     /locus_tag="OQQ26_003143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HCS1858508.1"
                     /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDDG
                     NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEIAITTWEEWNSNRK"
     gene            15236..>15926
                     /locus_tag="OQQ26_003144"
     CDS             15236..>15926
                     /locus_tag="OQQ26_003144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HCS1858509.1"
                     /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
                     AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTE"
BASE COUNT         4086 a         4108 c         3692 g         4040 t
ORIGIN      
        1 gcgccgcgtc atgccaccat aacgatacgg cgtgccatgc cagctttgta gctggtcgtt
       61 caaaccggca ataacggtaa tcgaatcaga aagtctggca tttggcggcg gtgctttatg
      121 gtggctacac ccggccagaa acagtgctgt gatcaaaata aggcagaaac gcattccgta
      181 cggttcctct gttttttatt cttgcattaa tttagcgtcg taattaaccg attttcaaga
      241 tactaatgaa atcagatggt cgaaatcagc attctgtgac cttcgatatc tagacggcga
      301 aaattcatcc cataggcctg cgccagattt ggcggcgtga gcacctcttc tctgcgtcca
      361 ctggccagca tttttccacc ttttagcaac cacgcccgat gcgcatgacg caacgtgtgg
      421 ttgagatcgt gactgctcat cacaatcgcc agtccttgct gacacagcgc gctcagaatt
      481 ttgtctaacg cactttgttg cgcaacatca agactgttca ttggctcatc aagaagcagc
      541 aattggcctg cgggattggc ttgtggtgtg atttgcaaca ccaccgcagc aagacgtacg
      601 cgttgccatt caccgccgga aagttgattg gtgctacgac cgagtttgtc atcaagagcc
      661 agcgcccctg cgacatcatt cagtagttcg gtacgcgttt tatcgtgctg atgcagtgtc
      721 aggtagtgcc agaccggcat tgcaaacggc ggcgtctgct gttgtgaaag gtaggcgcga
      781 tgcagcgcga gttttgttgc ggaccatgct tccagtggtt gccccgcgaa ctgaatgctt
      841 cccttaccgc tggtcattcc ggccattcgt gcaagcaagg tactcttacc cgcgccattc
      901 ggccccacca ggtgcaggat ctccccagcc cgaacctcgc cagaaagcgg ccccaggcgg
      961 gtagattccg caacatcctg taactgcatc acaatagaca ttattttgcc aacgccaatt
     1021 taatgctttc catcacaatg ggatcttccg gcgtcatatc cggggaaaaa cgctggatga
     1081 cttttccgtc cctgccaacc aggaattttt caaaattcca taaaatatca tccgggtaca
     1141 gcggtgcacg gcctttgctg accatacggg catagaatcc gctctcttcc ggcgcgactg
     1201 cggtcggcgc tgcggcaatc aatttttgat acagcggatg gcgtccttcg ccattaactt
     1261 caatcttact gaacatcggg aacgtcaccc cccatgtggt ggtacagtaa gttttaatct
     1321 cttcatcgct gcccggttct tgttccagaa actggttgca cgggaatccc agcaccacaa
     1381 aacctcgatc ggcccaggct ttctgaatat tctccaactg ctcatattac ggcgttaagc
     1441 cacactttga ggcgacattg acaatcaaca gcacattacc agcgtacttc tccagcgtgg
     1501 tcacttcacc gtcgatatct ttcactacgg tcgtcagaat ggaatcttgc atcgtttctc
     1561 ctgggtgtgg tcagtaaaaa tcttagcttt taatcataga ccgtcttttt gcggctaacg
     1621 tcctgctttt aacaataacc agataaacac cggcgcaccc aacgttgcgg tgaccacgcc
     1681 aataggcagc tctgcggcag ctaatgccag gcgcgctaca atatcggcca gcagcaatgc
     1741 gctcgcccct gccagcgcgc agccgggaag taatacgcga tgatcggtta aaccacacaa
     1801 ccgaagaata tgtgggatca ccagaccaat aaagccgata gcacccgcca gcgccacact
     1861 gacgccaacc atccagccgg tcgctgccac cagcacattg cgccagaacc acaggggtaa
     1921 acccagttgc cgcgccgaga tctcgccaag tgctaacata ttcatcggcc tggactgaca
     1981 acagatccac aacaacacgg ggatcaatgc cagcatcagc cagctttgcc gccagtctac
     2041 gccgccaaaa ccgcccatca tccagtacat cagctgacgt aaatcaacag aggtggaaaa
     2101 gtagatagcc cacgtcatta gtgcgctaca gataatccct aatgcaacgc cagccagcaa
     2161 taaccgactg gtcgaaagat gacgacgggc gaaacgtaag agtattaaag tgatgataag
     2221 cgccagcaat cgcacacagc cctagcgccc agttggggag ttgcccttgc ccaagcaata
     2281 ccgcggcgat aagccccacg cctgcgccgt tagagacgcc aagtagtcca ggttctgcca
     2341 gaggattttc aaacaacgcc tgcattacag cgccggatat agccagcgcc gcaccaacca
     2401 gcaatacagc cagcgtacgt ggcaggcgaa tttgccagac gaacagttcg ccacgaggag
     2461 taaaccagtc acctggcgag atccattgtt caccggcgca aaggcttaag agaagcgcca
     2521 gcagcatcaa aactgatagg cataataacc agcgaatatt ttgtcgctgt tgttggcggg
     2581 caagtgtcag catggtatcc gttctgctga agtgtcatgg cgttgatttt acggtgactc
     2641 ttcgacagtg aaaagaaaaa aggccgcaga gcggcctttt tagttagatc agattactcg
     2701 tctttgggcg aagcgttttc gacccggctt tttaacttct gcccgggtct gaaggtcacc
     2761 acgcgccgtg ctgtaatggg aatatcctcg cccgttttcg ggttacgtcc cgggcgttga
     2821 ttcttatcac gcagatcgaa gttaccaaaa ccagagagtt tcacctgttc gccgttttcc
     2881 agagcgcgac ggatctcttc gaaaaacagt tcaaccagtt ctttggcatc ccgcttgcta
     2941 agcccaagct tatcaaacag atattctgac atttcagctt ttgtaagcgc cataggttca
     3001 atccctcaat gatgcctgga atcgctcttt taatgcctct acacatttgg cgacggtagc
     3061 ggcaatctcc tcttcttcga gtgtacggct ggtatcttgc aggatcaggc ttatggcgag
     3121 gctcttatac ccctccgcaa cacccttacc gcggtacacg tcaaataagt ttacgccaac
     3181 tacctgattt acgccaactt tcttacattc ggataaaata tccgctgcgg gaacgttttc
     3241 tgcgaccacc accgcgatgt cacgacggtt tgccgggaag cgagaaatct cgcgcgcctg
     3301 aggtaccacg cggtctgcga gcttgttcca ctccagttcg aacaccagag tgcgaccgtt
     3361 aagatccagt ttacgttcca gttcaggatg aacaactcca acaaaaccaa tacgttcacc
     3421 tttcagataa atcgctgcgg attgccccgg atgcagtgcc ggattcgctt ctgcacggaa
     3481 ctcaacctca ttcagtttac cggtcaggtc gagaacggat tcaagagcgc ctttcaaatc
     3541 atagaaatca acggtctctt ttgccaggtt ccagtgctct tcgtaacggt taccgcaaat
     3601 cacaccggct aacatcagat cctgacgaat gcccaacggt gcctgagtat ctggtacgaa
     3661 acgcagaccg ctttcgaaaa tgcgcacacg gttctgctga cggttctggt tgtacaccac
     3721 ggttgccagc aggccggtcc acagagaaag acgcattgct gacatttcaa cagagatcgg
     3781 acttggcagc agtaaggctt caacgcctgg atggatcatc tgctgcactt tcggatcaac
     3841 gaagctgtag gtgatcactt cctgatagcc tttgtcgttg agcagcgttt tcacgcgctt
     3901 gagcgacagg tcagcttcac ggtgagtacc cataatcagg cttgcctgta ccggctcatc
     3961 cgggatgttg ttgtagccgt aaacacgcgc cacttcttcg accagatctt cttcaatctc
     4021 catgtcgaaa cgccagctcg gcgcaacggc ctgccattcg tctttgcctt cggtcacttc
     4081 gcagccgaga cgacgcagaa tgtcagttac ctgctcatca gcaatatgat ggccgatcag
     4141 gcgatccagt ttgctacgac gtaaagtgat ggttgcacgc ttcggcagcg ttgcttcgct
     4201 ggtgatatca attaccggac cagcctcacc accgcagatg tcgatcagca gacgggtcgc
     4261 acgttccatc gctttgtgct gcagtgccgg atcaacgcca cgctcataac ggtgagacgc
     4321 atcagtatgc aggccatgac gacgagcacg accggtgatt gataacgggc tgaagaaagc
     4381 gcattccagc aggacgtttt gcgtttcgtc attcacgcca gagtgttcgc caccaaagat
     4441 gccgcccatc gccagcgcct tgttgtggtc tgcgatgacc agagtgtcag cattcagctt
     4501 cgcttcagtg ccatcaagca gcaccagcgt ttcgccctct tttgccatcc gcaccacaat
     4561 gccgccttca atgcgatctt tatcgaaagc gtgcatcggc tggcccagtt cgagcagtac
     4621 atagttggtg acgtcaacaa ctgcatcgat agaacggatc ccgcaacgac gcagtttttc
     4681 tttcatccac agcggagttg gcgctttaac gttaatgcct tttaccacac ggccaagata
     4741 gcgcgggcag gcttccggcg cttcgactgt aatcggcaac gtgtcgtcga tggtcgcacc
     4801 aaccggaacg atttccggtt caaccagcgg cagctgattc agcacggcaa cgtcacgcgc
     4861 aacaccaatg atacctaaac agtcggcacg gtttggtgtc acgctgattt cgatggtgtt
     4921 gtcatcgagt ttcaggtatt cgcggatgtc ggtgccaatc ggcgcatccg caggcagttc
     4981 gataatgcca ctgtgatcgt cagaaattcc cagctcagaa aaggagcaca gcatcccttc
     5041 agacggttcg ccacgcagtt tcgccgcttt aattttgaaa tcacccggca gaacagcacc
     5101 aatggtagct accgccacac gcaggccctg acggcagttt ggcgcaccac agacgatgtc
     5161 cagcaggcga tcgccgccga cattcacttt tgtcacacgc agtttgtcag cgttcggatg
     5221 ctgcgcacac tcaaccactt caccaacgac cacgccgtgg aagctaccgg caaccggttc
     5281 tacaccgtca acttccaggc ccgccatagt gatttgattc gccagcgcat cgctatcaat
     5341 cgccgggttc acccattcgc gtaaccacag ttcactgaat ttcataatct attcctgcct
     5401 tatttaaact gtttgaggaa acgcagatcg ttttcgaaga atgaacgcag gtcggtgacg
     5461 ccgtaacgca acatagtcag acgctccatc cccatcccga aggcgaaacc agagtaaact
     5521 tccgggtcga tgccaacgtt acgcagcacg ttcggatgca ccatcccgca gcccagcact
     5581 tccagccatt taccgttttt acccatgaca tccacttctg cagaaggttc ggtaaacggg
     5641 aagtaggaag gacggaagcg aatctgcaaa tcttcctcaa agaagttacg caggaagtcg
     5701 tgcagcgtgc ctttcaggtt ggtaaagctg atgttggtat caacaatcag accttccatc
     5761 tgatggaaca tcggcgtgtg agtctggtcg tagtcgttac gataaacacg gccaggcgcg
     5821 atgatacgaa tcggcggctg ctgggctttc atggtgcgga tctgtacgcc agaggtctgg
     5881 gtacgcagca ggcgggtagc gtcaaaccag aaagtgtcgt ggtcagcgcg cgccgggtgg
     5941 tgaccaggaa tgttcagagc atcgaagtta tgataatcgt cttcgatttc cggcccggtt
     6001 gccacggtaa agccaagctc accgaagaaa ctttcgatac ggtcgatggt acgggtcacc
     6061 ggatgcagac cgccgttttc aatgcgacga cctggcagag agacatcaat cgtttccgcc
     6121 gccagacgcg cattcagtgc tgcgctttcc agttccgctt tacgcgcatt cagcgcctgc
     6181 tgaacctgtt ctttcgcttc gttgataacc gcaccagctg ccggacgctc ttctggcggc
     6241 agctcacgca gggtcgtcat ctgaagggtt aagtgccctt ttttacccaa atattcgacg
     6301 cgcacattat ctaacgcggc aacatctgac gcctggctaa tggccgcctt cgcactggca
     6361 accagttctg cgagatgtga catggttttc ctcattgtgt cagtgatgac actggttcgt
     6421 tggacttaga gcctatccca tcaggctatt ttacttgcca ttttggcctc gggcagtgct
     6481 cgaaatcctc acgtacttaa gtacgctccg gtttctccgc gctggccgtg tccagactgg
     6541 ctgcgacaat tacgcctgat agactggctt tttatttttc aaaacgcgca tacaaaaaaa
     6601 gcctccactg ggaggctttc aggcgctgtt ttccgtttct cttctcacgc gctagcctcc
     6661 tggattcagg tgctaaagta aaaaaagaag cggaaaatag cagcattcat tgcttgcgtt
     6721 accttttggt actcttcaaa agacctttat tgaaaaggct acggcgataa aagtcaatgt
     6781 tttgatggcg ttgaaacgaa aagagggaga ctagctccct ctttcaactg gcttatgcca
     6841 gagctgcttt cgctttttca accagagcgg tgaacgctac tttgtcgaat actgcgatat
     6901 cagccaggat cttacggtcg atttcaacag aggctttttt cagaccattg atgaatttgc
     6961 tgtaagaaat accgttctga cgtgctgctg cgttgatacg cgcaatccac agttgacgga
     7021 actgacgctt acgttgacga cggtcacggt aagcatactg accagctttg ataacagcct
     7081 ggaaggcaac gcggtatacg cgagaacgcg caccgtagta gcctttagct tgtttcaaaa
     7141 ttttcttgtg acgtgcgcgt gcaataacac cacgttttac gcgagccata tgtgctctcc
     7201 tgtatctata ttctaattaa aaagttaaaa acgttaacgg cttatgcgta cggcaggcac
     7261 gcgattacca ggcccagatc gcctttggaa accatggctt tcggacgcag gtgacgttta
     7321 cgtttggtcg cttttttggt cagaatgtga cgcaggttag cgtgcttgtg cttaaaacca
     7381 cctttaccgg tttttttgaa gcgcttagca gcaccgcgta cggtcttaat ttttggcatt
     7441 ttaataactt ccacttcgca ttgttaataa acgaaacaaa ggcgaacaaa gcctgtgaag
     7501 cccgaaggct ccacagacag tgctacttga aggccttact gtttcttctt aggagcgagc
     7561 accatgatca tctggcggcc ttcgatcttc gttgggaagg attcgaccac tgccagttct
     7621 tgcaaatcgt ctttcacgcg attaagcact tccataccga tttgctggtg cgccatctca
     7681 cgaccgcgga aacgcagcgt gattttggct ttatcaccct cttcgagaaa gcgaatcagg
     7741 ctgcggagtt ttacctgata gtcgccttca tctgtaccag gacggaattt aatttcctta
     7801 acctggataa ctttttgctt tttcttctgt tccttagaag acttgctctt ttcatagagg
     7861 aatttgccgt aatccattat acgacaaacc ggcggctcgg cgttagggct gatctcgact
     7921 aagtctactc cggcttcttc tgctttctcc agagcgtctc tcagactcac aataccaagc
     7981 tgctcgcctt ccagacctgt taagcgaacc tcctgggcgc gaatttcgcc attgatacgg
     8041 ttagggcgcg ccgtttgaac tcgttttccg cctttaatac cttattcctc caattgttta
     8101 agactgcggc tgcgaatctc ttgttgcagc ttctcgatca cttcatttac gtccatgctt
     8161 cccaggtctt taccacggcg ggtgcgaacg gcaactttgc cagattccac ctctttatca
     8221 ccacagacca gcatatatgg gacgcgacgc aaagtgtgct cgcggatttt aaagccaatc
     8281 ttctcatttc tcaagtctgc tttaacacga atgcccgcat ttgatagttt ttgcgtcaat
     8341 tcgttaacgt attcagactg cgaatcggta atattcatga taacaacctg aaccggcgcg
     8401 agccaggtcg ggaagaaacc agcgaattct tcggtcagga tcccgatgaa acgttccatc
     8461 gaccccagaa ttgcgcggtg aatcattacc ggtactttac gttcattgtc ttcgcctaca
     8521 taagaagcgc tcagacgaga aggcaaagag aagtccagct gtactgtacc gcactgccat
     8581 gcacgatcga ggcagtcata cagggtaaat tcaattttcg gaccgtagaa agcgccttca
     8641 cccagttgat attcaaacgg gatgttgttt tcttccagcg caaccgccag gtccgcctca
     8701 gcacgatccc acatttcgtc actgccaata cgtttttcag gacgagtgga gagtttgacg
     8761 acgatcttct cgaagccaaa agtgctgtac atatcataga ctaaacggat acatccgtta
     8821 acttcatcgc gaatttgttc ttcagtacag aagatatgcg cgtcatcctg ggtaaatcca
     8881 cgcacgcgca tcaggccatg cagcgaacct gacggctcgt tacggtgaca gctaccaaac
     8941 tcggccatac gcagcggcag atcgcgataa gacttcagcc cctggttgaa aatttgtacg
     9001 tgacccgggc agttcatcgg cttaatgcag tattcacggt tctcagaaga cgtggtgaac
     9061 attgcatctt tgtagttgtc ccagtgaccg gttttttccc acaggacacg gtccatcatg
     9121 aacggacctt taacttcctg atactggtac tctttcagtt tagaacgaac aaacacttcc
     9181 agttcacgga agatggtcca gccgtcgttg tgccagaata ccatacccgg cgcttcttcc
     9241 tgcatatggt acaggtcgag ctgtttaccg attttacggt ggtcgcgttt cgcggcttct
     9301 tccaggcgct gcaggtaagc gttaagcgct tttttgtctg cccacgccgt accgtaaata
     9361 cgttgcaaca ttttgttgtt gctgtcgcca cgccagtaag cccctgccgt tttcattagt
     9421 ttgaaatgat ggcagaaacg catgttcggt acgtgcggac cgcggcacat atcgacatat
     9481 tcttcatgga agtacagacc tggcttgtca tcatgggcga tgttttcgtc aagaatggag
     9541 actttgtagc tctccccacg gttggcgaaa gtttcacgcg cttcgtgcca gctgactttc
     9601 ttcttaatga cgtcgtagtt tttctcagca agctcatgca tccgcttctc gagtgcttcg
     9661 acatcttcct gggttaacgt gcggtcaaga tcaacgtcgt aataaaaacc gttgtcaata
     9721 accgggccga ttgccatttt ggtatgcggc caaagttgtt taatcgcgtg ccctaacagg
     9781 tgcgcacagg agtgacgaat gatctccaga ccttcttcgt ctttggcggt aatgatggac
     9841 agttgtgcgt cgttttcaat cagatcgcaa gcatcaacca gttcgccatt aacgcgccct
     9901 gcgatacagg ctttcgccag acctggacca atgtccagcg caacatccat ggggcttaca
     9961 gcgtggtcgt aatggcgttg gctgccatca ggaagagtta taacaggcat tttatatcct
    10021 tatttgcagt ggtgacccac acgaaagatc acatacaaag aaaaatttgt ttattaacag
    10081 ttcattgcga aaccatcgag ccaacaaatg ctaaattggt tcgcaatcag gtacacaaat
    10141 gaaagacatt aacctctcac cttccacccg gttgagcgat gttaacacta aaaaaaggga
    10201 gattgtacct ttccgtttca cattgattcg attcgcaatt cgtttgtagt gagtacacca
    10261 gcaaaacgct taaagaacaa ctgataacat cacggagcgt ctgaaaggtt tactgcgagc
    10321 ggatttacag cagcataaac tgaatccagc aaagttcgtt gcgtgatttg gcggtagtat
    10381 ttaaacgatc atgagattaa tgacgaagtg gtcatatcac aatgataaaa gtgacacaat
    10441 tcttatagca atttttcgtg cacatttcgt tctggcgata ataattaatc atcatcctca
    10501 aaacatccag acatatataa ggtgaataga ttatgagtca aaacgatatc attatcagaa
    10561 ctcattataa gtctcctcat agattgcaca tcgatagcga cataccaacg ccttcatcag
    10621 agcctattaa tcaatttgcg cgccaactca tcaccctact tgatacctct gacttaagtt
    10681 cgatgctgtc atactgtatt actcaggaat ttaccgcaaa ctgtcgaaaa atatcacaaa
    10741 attgttactc tactgccctt tttatcatta actttgccac ttcacccatc catgcagaaa
    10801 atatacttat tacattacac tataaaaaag aaatcattcc cttatttctg gaaaccacgc
    10861 ctattaaggc taaccatttg cgaagcatac tggattatat tgagcaggaa cagttaactg
    10921 ccgaagatcg taaccattgt atgaaactgt ctaaaaaaat ccatagagaa aaaactatac
    10981 aaccaacagt aaatctcaat ggtagtgcat gttttttgca atctccttct gacgctattt
    11041 tttgtcgcca tctgtcattg caatacgccc ttgattcatt gagaaatgga aaaggcaaag
    11101 tcaacctgat taaacattac tcctccgttg aatccataca gcagcatgtc cccttagtcc
    11161 gggacgcgga gttcagagca ttacttcgcc atcctcctgc agggagtcgc gttatcgcga
    11221 gtaaggattt tggcttcgct ttagatattt tcttttgtcg aatgatggca aacaatgtca
    11281 gtcatatgtc cgcgatttta tatatagaca atcatacttt gtcagtaagg ctacgaataa
    11341 agcagtcagt gtatggacaa ttaaactatg tagtgtccgt ttacgacccg aacgatacca
    11401 acgttgccgt cagaggcacc cacaggacag cacggggctt tctttcgctt gataagttca
    11461 tcagttcagg tcccgatgct cagacctggg ctgataggta tgttcgcaac tgtgcaattg
    11521 ctattctgcc cctattacct gtgggagttc caggggctat tttcgcgggt attgcatcac
    11581 gaatgccatt tgcccctata catccatcgg caatgttgtt aataatggcc acaggccaga
    11641 ctcaatagct tattacatta ttcaaacagt tgcccatact ccctgaaaaa gaaatcattg
    11701 aaataataac tgcgcagaat agcgttggta cacctgcttt atttctggct atgatgaacg
    11761 gacatactga caacgtaaaa atatttatgc aagaaattca gtcactgata tacaatcata
    11821 tcattcatga agataatctg gttaaattac tgcaaactaa aagtgctaac gaaacacctg
    11881 ggctctatat ctccatgttg tatgggttcg atgaaacaat cgatatcttt ctgaatgcat
    11941 taaccactcc aatagcacaa gagcttttaa acaaaaaaat agtgatggat attttagcaa
    12001 tgaaaacacg tgatggtgaa ccagggttgt ttgctgcaat ggaaaataat caccctttgt
    12061 gtgtcacacg gttcctctct aaaattaatg gcatcgcctt taaatacaag ttgagcaaag
    12121 ctaacatcat ggatttatta aaaggcgcta cagcacatgg aacccctgca ttatacatcg
    12181 ccatgagcaa gggtaatgaa gacgtcgtgt tatcttatat atcgacgctg aatatttttg
    12241 caaaaaaaat attcttttag tcaacgtcag ttattcacac tgttggccgc taaaaatcat
    12301 gacaacatgt cagctgttca tatagccatt catcataatc attataaaac tgtagaaaca
    12361 tattatgctg ctataaatgt aatcagccaa agcctgagtt ttagtgctga tgaactaaag
    12421 acgtatttat aaccaactat tttcgatata tatgttgatg cataatatta ttttttcata
    12481 aaacgcagaa acagtgacca ggtgtacaac gccacccaac ggctgtaata acaaaaaatc
    12541 ccttgatgcc cgtccctttt gttacactcc gttatcacgc acaagagata tgcaggacac
    12601 tggtatgccg actaaacgct ttgataaaaa acactggaag atggtggtag tgctactggc
    12661 aatctgtggc gctatgttgt tgctacgttg ggcagcaatg atttggggct gagcagtgac
    12721 aaacgaagac aaccagaccg cataacacgg tccggcagat aattttacat gctgtagccc
    12781 agcgataagg ttgtccgacg gtcggtatgt tccggtgcag actctggagg ttcagagttc
    12841 catgtaacgt tgtaagccac cttcagtcca aaatgttcat taatagcaac atttaatgcg
    12901 ctttcggagt tcagcgttgt gtcttccgcg ccaaagaccg aaacaccctg cgtaaattta
    12961 gcgttatcag tcaactgcca tgcataagcc ccggagacat agcccagcgg ctgagtttca
    13021 ctggcattgt cggtatattt gtcgtaacgc acacctggac cgaattcaaa gcggaaactg
    13081 tgtaccgggc cattcaaaaa ctgacgacca taacccgcgg tcaacacatc gcgctctcga
    13141 tagccgttat aacggtctgt cagccagctt gccagaccaa ataaatagtc ataatcagtt
    13201 aaattaaaac ggctacgccc gcccgccgca tatttttctg aagaacgctc atcattagaa
    13261 gaagtattac tggcgttccc ccacagcgac caggcagtgg tttgtccata ccaggtcatg
    13321 gtggtgtcag ccgtaagtga ggagcttttc gtattgcctg attgtgcaag atatcctgcg
    13381 tttagattac cttcgaaagg ttttttagcg ctggcaggat cgtccatgac agtaaaaacg
    13441 gaatcatcgg cagctgcatt cagtgacgca aacatgcccc ccgccaacat aacgatggca
    13501 ggaactgtct tcaaaagctt catttatcaa gagtccgtac aacaaaaaaa gagaccatcg
    13561 cggtcccgga aactttctta aggatcaaag attagcgtcc ctggaaaggt aacgaattat
    13621 aaaaaggcgc gaataactta gcaatgtatt cttatttcat tttttgaata agcatgtggc
    13681 gaaaacagat ttttatttat atatatttat ctgcaaaatt ttaaataaag ctccaataaa
    13741 tcatattgtt aatttcttca ctttccgctg attcggtgcc agactgaaat cagcctatag
    13801 gaggaaatga tggtacgtat ctatacgttg acacttgcgc cctctctcga tagcgcaaca
    13861 attaccccgc aaatttatcc cgaaggaaaa ctgcgctgta ccgcaccggt gttcgaaccc
    13921 gggggcggcg gcatcaacgt cgcccgcgcc attgcccatc ttggaggcag tgccacagcg
    13981 atcttcccgg cgggtggcgc gaccggcgaa caccaggttt cactgttggc ggatgaaaat
    14041 gtccccgtcg ctactgtaga agccaaagac tggacccggc agaatttaca cgtacatgtg
    14101 gaagcaagcg gtgagcagta tcgttttgtt atgccaggcg cggcattaaa tgaagatgag
    14161 tttcgccagc ttgaagagca agttctggaa attgaatccg gggccatcct ggtcataagc
    14221 ggaagcctgc cgccaggtgt gaagctggaa aaattaaccc aactgatttc cgctgcgcaa
    14281 aaccaaggga tccgctgcat catcgacagt tctggcgaag cgttaagtgc agcactggcg
    14341 attggtaaca tcgagttggt taagcctaac caaaaagaac tcagtgcgct ggtgaatcgc
    14401 gaactcaccc agccagacga tgtccgcaaa gccgcgcagg aaatcgttaa tagcggcaag
    14461 gccaaacggg ttgtcgtttc cctgggtcca caaggagcgc tgggtgttga tagtgaaaac
    14521 tgtattcagg tggtgccacc accggtgaaa agccagagta ccgttggcgc tggtgacagc
    14581 atggtcggcg cgatgacact gaaactggca gaaaatgcct ctcttgaaga gatggttcgt
    14641 tttggcgtag ctgcggggag tgcagccaca ctcaatcagg gaacacgtct gtgctcccat
    14701 gacgatacac aaaaaattta cgcttacctt tcccgctaac aaaaacattc ccccagcatt
    14761 gggggaatca ccaccaacct gtcggcaacg cgtttctccg actatgctca aaagtcatgt
    14821 gataacaaag gggtgaacta tggccagtgg cgatcttgtc cgttatgtca taaccgtcat
    14881 gttgcatgag gatacattga ctgaaattaa cgagttgaat aattacctga ctcgcgacgg
    14941 ttttttgctc accatgacgg atgatgatgg aaatatccat gagctgggga ctaacacttt
    15001 tggacttatc agtacccaaa gtgaagaaga aattagagaa ctggtttcgg ggcttaccca
    15061 aagtgcaacc ggtaaagatc ctgaaatagc catcacgacc tgggaggaat ggaatagcaa
    15121 cagaaaataa atggtttttg ggcaataatc agtctgtggt gtgcgttagc tcgtgttttt
    15181 acaccacatt cttgcgctaa ccttatgatc tggcagacaa catgggagag acatcatgtg
    15241 gcaggcaatc agtcgtcttt tgagcgagca gttaggtgaa ggcgaaatcg aactgcgtaa
    15301 tgaactgcct ggcggagaag tccatgccgc atggcatttg cgctatgcag gacatgactt
    15361 tttcgtcaaa tgtgatgaaa gggaactgct tcccggtttt accgccgaag ccgaccaact
    15421 ggagttactg tcgcgtagta aaaccgtcac cgtgcctaag gtttgggcag taggcgctga
    15481 ccgtgactac agttttctgg tgatggatta tctcccacct cgtccgctgg atgcgcatag
    15541 cgcatttatt cttggtcagc aaattgcgcg tttacatcaa tggagtgacc aaccacaatt
    15601 tggcctcgat tttgataact cgctctccac aactccacag cccaacacct ggcaacgtcg
    15661 ctggtcaacg ttttttgctg aacaacggat tggctggcag ttggaactgg cagcagagaa
    15721 agggatcgct ttcggcaata tcgacgccat cgtcgagcat attcagcagc gtctggcctc
    15781 gcatcaaccg cagccttctc tgttgcacgg cgatttatgg tccggcaact gtgcgctggg
    15841 tccggatggc ccgtacattt tcgaccctgc ctgctactgg ggtgaccgag agtgcgacct
    15901 ggcgatgtta ccgctgcata ctgaac
//
LOCUS       DAJVTL010000104        15732 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.106, whole genome shotgun sequence.
ACCESSION   DAJVTL010000104 DAJVTL010000000
VERSION     DAJVTL010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15732
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.106"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..579
                     /gene="allD"
                     /locus_tag="OQQ26_003145"
     CDS             <1..579
                     /gene="allD"
                     /locus_tag="OQQ26_003145"
                     /EC_number="1.1.1.154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate dehydrogenase"
                     /protein_id="HCS1858510.1"
                     /translation="PLAFAAPGEGNEILTFDMATTVQAWGKVLDARSRNMSIPDTWAV
                     DKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGR
                     NLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAA
                     VEGIEIVDDIYQYLISDALYNTSYETKNPFAQ"
     gene            601..1836
                     /gene="allC"
                     /locus_tag="OQQ26_003146"
     CDS             601..1836
                     /gene="allC"
                     /locus_tag="OQQ26_003146"
                     /EC_number="3.5.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allantoate deiminase"
                     /protein_id="HCS1858511.1"
                     /translation="MITHFRQAIEETLPWLSSFGADPTGGMTRLLYSPEWLETQQQFK
                     KRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWL
                     AIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNN
                     FVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTV
                     TLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNV
                     VPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDL
                     VATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITD
                     LAEGVKTLALMLYQLARQK"
     gene            1847..2632
                     /gene="allE"
                     /locus_tag="OQQ26_003147"
     CDS             1847..2632
                     /gene="allE"
                     /locus_tag="OQQ26_003147"
                     /EC_number="3.5.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(S)-ureidoglycine aminohydrolase"
                     /protein_id="HCS1858512.1"
                     /translation="MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLIKNIIPGFEN
                     CDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFA
                     LSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYE
                     GMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN
                     WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI"
     gene            complement(2860..4005)
                     /gene="glxK"
                     /locus_tag="OQQ26_003148"
     CDS             complement(2860..4005)
                     /gene="glxK"
                     /locus_tag="OQQ26_003148"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 3-kinase"
                     /protein_id="HCS1858513.1"
                     /translation="MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADG
                     GEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPE
                     KRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQV
                     LAANGGNLARVASIEMDECDPRLANCHLEVACDVDNPLVGARGAAAVFGPQKGATPEM
                     VEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAV
                     NLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVH
                     QYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN"
     gene            complement(4027..5328)
                     /locus_tag="OQQ26_003149"
     CDS             complement(4027..5328)
                     /locus_tag="OQQ26_003149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308602.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil/xanthine transporter"
                     /protein_id="HCS1858514.1"
                     /translation="MFNFAASRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLL
                     TLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATS
                     LAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFG
                     IADPYFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSH
                     SLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTR
                     YRRSFVATGFMTLITVPLAVIPFSPFVSCIGLLTQTGDYTRRSFIYGSVICLLVALVP
                     ALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMA
                     LPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE"
     gene            complement(5385..6688)
                     /gene="allB"
                     /locus_tag="OQQ26_003150"
                     /pseudo
     CDS             complement(5385..6688)
                     /gene="allB"
                     /locus_tag="OQQ26_003150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415045.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase AllB"
     gene            complement(6748..8202)
                     /locus_tag="OQQ26_003151"
     CDS             complement(6748..8202)
                     /locus_tag="OQQ26_003151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative allantoin permease"
                     /protein_id="HCS1858515.1"
                     /translation="MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVP
                     NYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVR
                     GALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLI
                     TFLLFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGLGPIFDYIPSG
                     IQKAENSCFLFLVVINAVVAVWAAPVVSASDFTQNAHSFREQALGQTLGLVVAYILFA
                     VAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAG
                     YQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMM
                     AHYFVVMRGKINLDELYTEPSDYKYYDNGFNLTAFSVTLVAVILSLGGKFIPFMEPLS
                     RVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG"
     gene            complement(8371..9249)
                     /gene="glxR"
                     /locus_tag="OQQ26_003152"
     CDS             complement(8371..9249)
                     /gene="glxR"
                     /locus_tag="OQQ26_003152"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HCS1858516.1"
                     /translation="MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAV
                     SVETAHQVTEAADIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKR
                     FARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVG
                     GNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHG
                     ERMIKRTFNPGFKIALHQKDLNLALQSAKTLALNLPNTATCQELFNTCAANGGSQLDH
                     SALVQALELMANHKLA"
     gene            complement(9349..10125)
                     /gene="hyi"
                     /locus_tag="OQQ26_003153"
     CDS             complement(9349..10125)
                     /gene="hyi"
                     /locus_tag="OQQ26_003153"
                     /EC_number="5.3.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HCS1858517.1"
                     /translation="MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEE
                     LKQVLASNKLEHTLHNLPAGDWAAGERGIACIPSREEEFRDGVAAAIRYARALGNKKI
                     NCLVGKTPTGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQ
                     ALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPYRGEPGTGE
                     INYDYLFKVIENFDYNGWVGCEYKPQTTTEAGLRWMDPYR"
     gene            complement(10138..11919)
                     /gene="gcl"
                     /locus_tag="OQQ26_003154"
     CDS             complement(10138..11919)
                     /gene="gcl"
                     /locus_tag="OQQ26_003154"
                     /EC_number="4.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate carboligase"
                     /protein_id="HCS1858518.1"
                     /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR
                     HILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG
                     QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
                     DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINAD
                     AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG
                     IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ
                     EMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTT
                     IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPERKVVAISGDFDFQ
                     FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG
                     VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE
                     LDNVMEFEDIAENAVDAPTETCFMHYE"
     gene            complement(12009..12824)
                     /gene="allR"
                     /locus_tag="OQQ26_003155"
     CDS             complement(12009..12824)
                     /gene="allR"
                     /locus_tag="OQQ26_003155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor AllR"
                     /protein_id="HCS1858519.1"
                     /translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS
                     DISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVA
                     GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL
                     LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI
                     ASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP"
     gene            complement(12902..13384)
                     /gene="allA"
                     /locus_tag="OQQ26_003156"
     CDS             complement(12902..13384)
                     /gene="allA"
                     /locus_tag="OQQ26_003156"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HCS1858520.1"
                     /translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV
                     EILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL
                     STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
                     "
     gene            13614..14540
                     /gene="allS"
                     /locus_tag="OQQ26_003157"
     CDS             13614..14540
                     /gene="allS"
                     /locus_tag="OQQ26_003157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AllS"
                     /protein_id="HCS1858521.1"
                     /translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT
                     GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLL
                     YNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFS
                     LDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGEK
                     EIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKF
                     GSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS"
     gene            14609..15703
                     /gene="mnmH"
                     /locus_tag="OQQ26_003158"
     CDS             14609..15703
                     /gene="mnmH"
                     /locus_tag="OQQ26_003158"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HCS1858522.1"
                     /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMN
                     NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRIDAWRAACLQNPQGILCCARGGQ
                     RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ
                     QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDES
                     RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
                     EYCEYLHHGLSAIKRRLGLQRYNELAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYD
                     PMYRYQLEKKAEKVVFRGEWAEVAEWVKAQ"
BASE COUNT         4122 a         4157 c         3758 g         3695 t
ORIGIN      
        1 ccactggcct ttgccgcgcc gggagaaggc aacgagatcc ttacctttga tatggcgact
       61 accgtacagg catggggaaa agtgctcgac gcccgctcgc gtaatatgtc tatcccggat
      121 acctgggcgg tcgataaaaa cggtgcacca acaaccgatc cgttcgcggt acatgctctg
      181 ctccccgccg ccgggccgaa agggtatggc ctgatgatga tgattgacgt cctctcaggc
      241 gtcttactcg gcttaccgtt cgggcgacag gttagttcga tgtatgacga tttacacgcc
      301 gggcgtaatt tggggcaatt acatatcgtt attaatccga actttttctc ctccagcgaa
      361 ttattccgtc aacatcttag ccagaccatg cgcgaattaa atgccattac ccccgcgccc
      421 ggttttaacc aggtttatta tcccggacag gatcaggata ttaaacaacg caaagccgcc
      481 gtcgaaggca tcgaaattgt tgatgatatt taccagtatt taatttccga cgcgctttat
      541 aacacgtcat acgaaacgaa aaatcccttt gcgcaataat tattgagaca ggactttctt
      601 atgattacac atttccgtca agctatagaa gaaacgctgc cctggctttc ctcttttggc
      661 gctgacccaa cgggtgggat gacccgttta ctttattcgc cggaatggct ggaaacccag
      721 cagcaattta aaaaaagaat ggcagcaagt gggctggaaa cacgtttcga tgaagtgggg
      781 aatttatacg gtcgcctgaa tggcaccgaa tatccacagg aagtggttct gagcggttcg
      841 catatcgata ccgtggttaa cggcggtaac ctcgacgggc aattcggcgc gctggcggcg
      901 tggctggcaa ttgactggtt gaaaacgcaa tacggcgcac cgttacgtac ggtcgaagtg
      961 gtggcgatgg cagaagaaga aggcagccgc tttccgtatg tcttctgggg cagtaaaaat
     1021 atctttgggc tggcgaatcc tgacgacgtg cggaatatct gtgatgccaa aggaaataat
     1081 tttgtcgatg cgatgaaggc ttgcggattt actctgccga acgccccact aactccgcgt
     1141 caggatatta aagcctttgt cgaactgcat atcgaacagg gctgtgtgct ggaaagtaat
     1201 gggcaatcaa ttggcgtggt gaatgcaatt gtcgggcaac gtcgctatac ggtgacgctg
     1261 aacggcgaat caaaccatgc aggcaccacg ccgatgggtt atcgtcgtga tacggtttac
     1321 gctttcagtc gcatttgcca tcagtcgatc gaaaaagcga aaaagatggg cgatccgctg
     1381 gttctgacct ttggcaaagt agagccgcgc ccgaatacgg tgaatgtggt gccgggtaaa
     1441 accacgttca ccattgattg tcgtcatacc gacgccgccg tgctgcgtga tttcacccaa
     1501 cagttagaaa acgacatgcg ggcgatttgc gatgaaatgg acattggtat tgatatcgat
     1561 ttatggatgg acgaagaacc cgtgccgatg aataaggacc tggtcgccac cctgacagaa
     1621 ttgtgtgaaa gtgaaaaact gaactaccgg gtgatgcaca gtggtgccgg gcacgacgcg
     1681 caaattttcg cgcctcgcgt accaacctgc atgattttca ttcccagcat caacgggatc
     1741 agccataacc cggcggaacg caccaatatt accgaccttg ccgaaggggt caaaacgttg
     1801 gcactcatgc tttatcaact tgccaggcag aaataaggag tcataaatgg gatatttaaa
     1861 taacgtcacc ggttaccgcg atgatttact ggctaaccgt gcgattgtta aacacggtaa
     1921 tttcgcactg ttaaccccgg atggtctgat aaaaaatatt attccgggct ttgaaaattg
     1981 tgacgcgaca atcctctcca cgccaaagct gggtgcctct tttgttgatt atctggtcac
     2041 actgcatcaa aacggtggca accaacaggg cttcggtggc gaaggcattg aaacgttcct
     2101 gtatgtgatc tctggaaata tcactgccaa agccgaaggg aaaacatttg ccttaagcga
     2161 aggtggctat ctttattgcc cacctggctc cttaatgacg tttgttaacg cccaggccga
     2221 agacagccaa atctttttat ataagcgccg ctatgttccg gtagaaggcc atgcaccgtg
     2281 gctggtttct ggcaatgcca gcgaactgga acgcattcac tatgaaggta tggatgatgt
     2341 gatcctgctg gatttcctgc ccaaagagtt aggttttgat atgaacatgc atatcctctc
     2401 ttttgcacca ggtgccagcc acggttatat cgaaacacat gttcaggaac acggtgccta
     2461 tattctttcc ggtcaggggg tttataacct cgacaataac tggatcccgg tgaaaaaagg
     2521 cgattacatc tttatgggcg cttattcttt acaggctggt tatggtgtag ggcgtggtga
     2581 agcgttcagc tatatttact cgaaagattg caaccgcgac gtagagattt aagtcatacc
     2641 actcgcctga ttatttttag ctatgttgga ttttgccacg gtttataccg tggctttttt
     2701 tgtaacattg cctgatgcgc ttcgcttatc aggcctacat gatctctgca atatatagaa
     2761 tttgcgcgat tttcaggaag gatatagtac tcatgccgca tccggcatga gcactgcgct
     2821 cttatacgaa ataaatcgca tccgctttaa agacaagagt cagtttttaa ttccctgacc
     2881 tattttaatg gcgcaggcaa tatttcgcgc gctgttgaag agattggttt caccgctggc
     2941 gagcacttcg gctaaaggtg ccaaacgtgg caaaatgctg aataccgcat caatgccgta
     3001 ctggtgcacc acttccacgc catcacccaa tacgccagca attccaatca ccggtacatt
     3061 aaactgtttc gccaccgacg ccacacccag cggcgcttta ccgcctgccg tttgcgagtc
     3121 gatgcgccct tccccggtaa tcaccagtgc tgcgccctgc actgcctgcg caagattgac
     3181 cgcattcaac acaatctcaa tacctggttt aatatccgca ttgagaaata ccgccgccgc
     3241 aatacccata ccgcccgcag cgccgccgcc cgccatctgg cagacgttga tttcagtttg
     3301 ctgttgtaaa acacgggcgt aattttgcag cccctgttcc agctcttcga ccatttccgg
     3361 cgttgcccct ttttgcgggc caaacaccgc cgccgcgccg cgtgccccta ccagcgggtt
     3421 atcaacgtca catgctactt caagatggca attcgccaga cgcggatcgc attcatccat
     3481 ctcaatgctt gccacgcgcg ctaaattgcc gccgttagcc gccagcacct gaccgtcggc
     3541 atcgaggaaa cgcacaccaa gcgcctgcgc catgcccata ccgccgtcga ccgtcgcact
     3601 gccgccaatg ccgagaataa tatggcgaat gccgttatcc agcgcatgac gaattaactc
     3661 ccccgtacca aaactggagg ccagcaacgg attacgcttt tcaggcgcga ccagcatcag
     3721 accacttgct gccgccatct caatcaccgc tgttttcccg tcgccggtaa ggccataaaa
     3781 agcattcact ttttcgccca tcggcccgca gacttcaagc gtcacgatgt tgccgcccgt
     3841 cgcggcgacc atcgcatcca ccgtcccttc gccgccatcc gctatcggca aacagatata
     3901 gttcgcatcg ggaaagaggg tcgaaaaccc ggctttaatt gcctgacaac atttttctgc
     3961 acttaagctc tctttaaaag agtctggcgc aatgacaatc ttcattatca atcctttttc
     4021 aacaaattat tcgatgcgtt cccacggaat aaggttatcc ataagaacag ccagtaaaat
     4081 cccgaccaat aagccgttac tgagcagagg acgcagcgtt aatggaaggt cttgcagata
     4141 cacaggcggt aatgccatta aaaatatgcc gacaaataac ggcaatgcga gtcgataaat
     4201 attgcgagcg gtaaaggtta tttgctggct aaacaccagc gcggaaaaga gtaaaggcag
     4261 ataagaaacc agcatgaccg cgctactcac gggtaaaggg atactgcaaa acagtcgtgt
     4321 gagtgccgga accagcgcca ccagcaggca aataacgctg ccataaataa acgaacgccg
     4381 cgtgtaatcg ccagtctggg ttaataaacc aatgcatgaa acaaacggtg aaaatggaat
     4441 taccgccagc ggtacggtta tcagcgtcat aaatccggtc gccacaaagc tgcgacgata
     4501 acgcgtattt cccgcgccct gctgcggata aaaaacatcc gtgccccgaa tcgcaccgta
     4561 ggtattgctg atattcacca gacctgtaat caccgccgtc aaaataatcc ccggcgacaa
     4621 agcaccgcca ctgccgagcg ggaaccactg ccagtgcaac tcaccggaga gcgaatgcga
     4681 agaaggaaag caaaagtacc acaacaacca gccggttatc gtaccgacca gcaggccata
     4741 acgggcaaaa cgttgcggca gaaagataat catcgccagt accaggcaca tcaccgccac
     4801 cgagagcgca aacggtggta actgaatttt aaaatatggg tcggctatgc caaacggcag
     4861 cccgagcata cctttgaaaa agatagtggt cagctgtgcg cccagcatca acataaacaa
     4921 gaccatcacc gacggcgtaa ataaccgtgc caggcgatgg cctaatccgc taaaaccaat
     4981 caacatcgtc agcacgccgg agagcgcaat ccccactgcc aggctggtgg cgatatcgtt
     5041 gatcggtgtc ccgcgcgatg cttcgccaag ggtgatagtt aggatggttc cccaccacag
     5101 gccccccggc ccttccataa tagcgcgacg atggccacag aacgcctgag cgaagcaggc
     5161 cagtgcggta gcaagaaaag catattgtgt gagcgtaagc aggctacttt gcggcaactg
     5221 aaaagcagaa agtagcgtag gaggaaccac aaccgtgttg caaaaaataa agaaaaacca
     5281 ctgaaatcct gataacaggc tttcgcggct ggctgcaaaa ttgaacataa acacacctta
     5341 accggagaat gcccgccgca aggacgggca ttgcaggggc cagattactg ctgatgttta
     5401 aggataaatt gacctttcgg cgcaacaggg aagccctgtt caatgtcgta aatcacatca
     5461 ccacgtaaga tggttttcgt gatacgcgcg ccaatggtac ggccaacata cgggctgact
     5521 ttgtggcgat attccagatc gtcattggta agaacatagc tgctattcgg ctgaatgaag
     5581 acgaagtcgg catcttttcc tggggcgata cggccttttt gctgcagacc gaaaatatct
     5641 gctgcgttag tcgccattaa tttgccgaac attggcagag acattccgcg tttctgtacc
     5701 gcttcatcga acatcacgtc catacagttt tgcagaccgg caataccgcc ccatgcttcc
     5761 atgatgttgc cggctttcat ttccggaggg catggtgagt ggtcggaaac caggcagtcg
     5821 atttcaccgt taaacagttt ttcccacatg cctttctggt tttccagatc gcggatcggc
     5881 ggtgaacact tcgccagagt accgatttct tcgaactgat cggtatccag tacaaagtaa
     5941 tgcgggcagg attcacaggt aacatcctga ccttcctgac gtgcacgagt cacttcttca
     6001 acaccttccg ggctgctgat atggcaaatg tgcagacggc aaccggcaac tttcgccagg
     6061 tacagtacgc ggcgaatcgc ttccacttcg gtaaataccg gacgcgaagc cacatagtca
     6121 tgggcagtta cgcgaccttc acttttcgct tcttcgccca gtgcatcaca gatcagcgcg
     6181 ttttcgcagt gcaccagcac cggctgcccc agttcgccca gcttctgcgc acctttgaag
     6241 aactgccagt cgtttacatc acggaagtcg ttgtcgatac cgcgctcgcc acaggtcgca
     6301 acgaagcatt tgaaaccgac aacgcccact tcatccaact catgcagacg atcaatgttg
     6361 taagacacca ggccaccgag ttgtaccgca tcgatagtca gcttgccttg agcggcattt
     6421 cgatcatggt ggtgatacca ccttttgccg ctgcgcgagt accggtttca taaccttccc
     6481 agtggctacg acccggttca gaaatatggg tgtgcgcatc aaccatgccc ggcgaaacca
     6541 ccagaccaga cgcatccata acttcttttg catcgcccag atcctgaccg atagcagcaa
     6601 tttttccgcc tttaacggcg atatctacaa cgcgagcttc gttttctaaa ataacggtgc
     6661 cgtttttaat gattaaatca aaagacataa caaactcctt gtaaaataca gattggtttt
     6721 taactcaatg ttcaatatcg ggattaatta acctatggtt ttttgctctc ctgttttttc
     6781 tgctgttgta cgtttcttta ataaggcgta ggccgcaaag gcgacgatga cgccgacaaa
     6841 ccatgaaaca cgcgataacg gttccataaa gggaataaac ttaccgccaa gagataaaat
     6901 aacggccacc agagttactg aaaacgcagt gaggttaaaa ccgttatcgt aatatttata
     6961 atcgctaggt tcggtataca gttcatcaag attaattttc ccacgcatca ccacaaaata
     7021 atgcgccatc atgacaccaa ttaccggacc aagcattccg ccgataatat cgaggaacag
     7081 ataaatactg tcctgatttt ccattaattt ccacgggcag atcagcaggc tgataatact
     7141 ggcaatcagt acgccgtttt tataggtcag tttcgtcggt gcaatagcgg caatctgata
     7201 accggccgga ataatattac cggtggcgtt agtggaaatg gtcgtcatca gaataaccag
     7261 taccgcaaag aacgaggcaa acaggctgtc ccaacgctga acaatatcca gcacgttcca
     7321 ggtgtcagcg ccgtaatgaa tactggctcc ggcaataata catacccccg cgaccgcaaa
     7381 cagaatatag gccacaacta aacccagcgt ttgccccagc gcttgctcac gaaacgagtg
     7441 ggcgttttgc gtaaagtcgg atgcgctcac caccggagcc gcccagaccg caactaccgc
     7501 gttaatcacc accaggaaca ggaagcaact gttttctgct ttctgaatac cgctcggaat
     7561 gtagtcaaag attggaccga gcccgaccag cgaaatcgcc caaatcgcca taccgccgaa
     7621 aacgatatag atgcacgggt taagaatggc agtgaattta tttaaaactt tgccaccgcc
     7681 aaaacctata ccaacgttga ccagccagaa gagtaagaaa gtaattaagc ccggtagaga
     7741 aaggcctaac agagtgaaat caccaccgag agtcaaaaat cccggccaga ttttgccaat
     7801 cagaatcaag caggccagtg accccgcgta acattgcagg ccaaaccaca taatggcagc
     7861 aataccgcct cttaataatc cgggaaacag tgcgccacgt acgccgtaag aagcacgcaa
     7921 gatcatggca aacggtacgc cgtatttact gcccgcagcg ccgtttaata ccattaccgc
     7981 ggcaatgaaa aaggcgctga ggataattgc cagcataata ctaaaggtag acaagccgag
     8041 aataaaaaag ccgccgacca tcacataatt gggaacgtta tgaaccgaac ccatccataa
     8101 ggtaaaatag ttaaatgttt tccaggtccg ctggctttgc gttttcggca atagatcttc
     8161 gctatagccg cgttgctgga atagttttct ctgatgttcc ataaatccct cttaatttca
     8221 cgtatcgaat aacgttgttt taatctagct atgaggaaca aataaaataa aaatattatt
     8281 tttaatactg aagcaacatc tttggctgct ttctttttta atattgctgg ccgattcatt
     8341 ttctgatatc ggccattttt attgcgggta tcaggccagt ttatggttag ccattaattc
     8401 cagcgcctgc actaacgcag agtgatccaa ctggctgcca ccgtttgccg cacaggtatt
     8461 aaataactcc tggcaggtcg cggtgtttgg caggttcagc gccagtgtct tcgcactttg
     8521 cagtgccagg ttgagatctt tctggtgcag cgcaattttg aaacctggat taaaggtgcg
     8581 tttaatcatg cgctcaccgt gaacttccag aatacgtgag gaagcaaagc ctcccatcag
     8641 cgcctggcgc acacgtaccg ggtctgcacc ggcttttgaa gcaaacagca gagcttcaga
     8701 gaccgcttca atattgagcg ccacaataat ctgatttgcc actttgcagg tttgaccgtc
     8761 gccgttaccg cccacaaggg tgatattttt accgagcagt tcaaacagcg gtttaacacg
     8821 ttcaaatacc gcttcgtcac cgccaaccat aattgacaac gtcccttcac gcgcgccgat
     8881 ttcaccgccg gagactggcg catcgagata atcaccgccc agttcattca cctgacgagc
     8941 gaaacgttta gtttcaatcg gggaaatgga gctcatatca acaatggttt tgcccttcag
     9001 cgaggctttg gtacaaccat tttcaccgaa cagaacttct tcaacctgtg gtgtatccgg
     9061 caccataata aaaatgatgt ccgctgcttc cgttacctgg tgcgcagttt caacactgac
     9121 ggcacccagt gacagtaatt catcagcaac cggaccaatg gttgtgacat gcagttgatg
     9181 accggcacgc gccagattaa tggccatcgg tgtacccata atgcctaagc caataaatcc
     9241 cagtttcata attaacctct tttaaatttt gcttttcctg gattcagaca acacgatccc
     9301 ctgccaactt agcggcctaa aaaagcattg cctgaacagc gttacgtttt aacggtacgg
     9361 atccatccag cgtaaaccgg cttccgtggt ggtttggggt ttatattcac acccaaccca
     9421 accgttgtag tcaaaatttt cgattacctt aaatagataa tcataattaa tttctccggt
     9481 ccccggttcg ccgcgatacg gattatcggc aatttgcagg tgaccaattt tatcggccca
     9541 ctgagtcatg gtgttggtta attcaccttc catccgctgc atgtgataaa tgtcatactg
     9601 aattttcaaa ttgcagcaac caacatcatc aatcaatttc agcgcctgcc gagttccggt
     9661 gagatggaaa ccaggaatat caaaatggtt aataggttca atcagtaata aaatatcttc
     9721 tttcatcagc atattcgcgg cataacgcag gttttctaca agcgttgcgt gaatctgttc
     9781 actgctgaaa ccagtcggcg ttttaccgac cagacagtta atttttttat tacccagcgc
     9841 acgagcataa cgaatcgctg ctgctacgcc atcccgaaac tcttcttcac ggctaggaat
     9901 acaggcaata ccgcgctccc ccgccgccca gtcacccgcc ggtaaattgt gcagcgtatg
     9961 ttcgagttta ttactcgcca gcacctgttt taattcttca atgtcgtagt cataaggaaa
    10021 cataaattca acgccacgaa aaccacactg cgcagctttc tcaaaacggg cgagaaaatc
    10081 atattcacca aataacatcg ataaattagc agagaaacgt aacattattt atctccctta
    10141 ttcatagtgc atgaagcagg tttcagtcgg tgcgtccact gcgttttcgg cgatatcttc
    10201 aaattccatg acgttatcca gttcgctgcc catcgaaata ttggtcacac gctcgagaat
    10261 aacttccacg actaccggta cccgatattg cgccattaag gctttcgcct gttcaaaggc
    10321 tggtgcaata tcttccggtt tgaagacccg aatagcttta caacctaaac cttccgctac
    10381 ttttacgtgg tcgacgccgt aaccgttcac ttcactggag ttaatatttt cgaacgcgag
    10441 ctgtacgcag taatccatat caaacgcgcg ctgcgactgg cgaatcagac ccagataggc
    10501 gttattgacc agtacatgga tgtacggaat gttgaactgt gcgccaacgg ccaattcttc
    10561 aatcaggaac tggaagtcga agtcaccgga aatcgccacc actttgcgct ctggatcagc
    10621 ggcacaaacc cccagcgccg ccggaatggt ccagcccagc gggcctgcct gcccacagtt
    10681 gatccagtgg cggtctttaa agacatgcag catttgtgcc gcagcgattt gtgacaggcc
    10741 aatggtggtg acataacaaa catcgcgacc aaaggctttg ttcatctctt catacacgcg
    10801 ctgtggtttc accggcacgt tgtcgaagtg ggttttgcgc agcaaagtgc gtttgcgctg
    10861 ctggcagtcg gcgacccatt ctttacgaca cggcagacga cccgcttttt gcatctcctg
    10921 cgccacttca accagcagtg tcagcgccgc tttagcatca gagacaatgc cgagatccgg
    10981 acacagcacg cgaccaattt gcgtcggctc aatatcgata tgaacgattt tgcgcccttc
    11041 ggtgtatttc tctaccgaac cggtatgacg gttagcaaaa cggttaccga taccaaacac
    11101 catgtcggac gccagcagcg ttgcgttacc gtaacgatgc gcggtttgca gacccaccat
    11161 cccggccatc agttcatgat cgtccgggat acagccccag cccatcagcg ttgggatcac
    11221 cggaacgctg gtcagttcag caaactgttg taacagtgca gctgcgtcag cattaattac
    11281 cccgcccccg gcaacaatca ccggacgttc ggcctggatt aacatttcta cagctttttc
    11341 gatctgcata cggctggcag caggtttgta gaccggcagc ggttcgtaca tgtcaggatc
    11401 aaactcgatt tccgcaacct gaacgtcgaa cggtaaatcc accagtaccg gacccggacg
    11461 accagaacgc atcaggtgaa atgcctgttg cagcacacga ggcaccagcg ccgcttcacg
    11521 tactgtaacc gccattttgc tgaccggctt ggcgatagct tcgatatcaa cagcctggaa
    11581 atcttcttta tgcagacggg cgcgcggagc ctggccggta atacacagaa taggaatgga
    11641 atcagcagaa gcggaataga gcgcggtgat catgtccgtg cccgcaggac cggaagtccc
    11701 cagacatacg ccgatattcc ctgccgttgc gcgggtataa ccttccgcca tgtgcgaagc
    11761 accttccaca tgacgcgcca gaatgtgacg aataccgccg tgcttacgca tcgctgagta
    11821 gaacggattg attgcagctc ccggaacgcc gaaggcggtg gtgatacctt ctttctccag
    11881 cacatacatt gccgcgtcaa cggctctcat ttttgccatt ttattcctac ctctattaat
    11941 tggaaaattt ttccaacttt cagattttgt caaaaaaacc cgctccgcag agcgggatgc
    12001 gacagacatt atggatgtgc tttcagtccc aacgccgtgc tgatatcgcg ggcggtgtct
    12061 ctgaccagct caccctgact gacaaaacga tcttctgtca gtcttgatga aggcccggag
    12121 atggagatag cggcaacaac gctaccgaca tcatcgtaaa ttgctgaagc tatgcaattc
    12181 agacctacaa catgctcttc tttatctacg gtatagccca gttcacgcgc ttgctccagg
    12241 tccttcagta aggtgggcat atccacaagc gtagttggcg taaactgctg caaaccggtt
    12301 tgcagaatga tgctcatcaa ctcctcttcc gccagcggat aaagcagcgc tttgcccgca
    12361 ccggaagcat gcagcggcag acgactgccc agcggcgcac acatcctgac catcgattta
    12421 cactctaact gaccaattaa taccgcttca ttgccgttac gaatcgcgac attgaccgtt
    12481 tcgccggaaa gtaacatcag gcggcgcata aacggcccgg cgacggagag gacatcgcgg
    12541 ttatggatgt acgccgcacc gacgttaaag acacctaatc ctatatgcca ccagcctaac
    12601 tgactgtcct gatagacaaa atccgctgcc tgtaaaacct tcaacaagcg aaaggtcgtg
    12661 gagagcggca aatccagatt gagagaaata tcgctaaccg acgagcttcc cccacttttt
    12721 tccagatatt gcagaatcgc aattccccgc tctaacgcct gtgcgccctt ctgtgccaca
    12781 ggctccgcct gtcctggcct gccgcgccgt ctaacttccg tcatacctac gttaactccg
    12841 acctacaagt gagcataaac aatgaacaat tagtttatct tatgcaagtc ggttgcaggc
    12901 gtcacgcaaa acagagttcc tgttcaggaa tactttcaac atcacagttg tcactgccgc
    12961 cgcgatcgat ggtcagaaaa tcggtgacac gctgccaggc gaaaagtggg tgatgccaga
    13021 cgttacgatg gtaattcact ccctgttcgc cgttggtaat aaacgcccgc agggttgaca
    13081 ggtctggttt gtcgtcacct aacgccacga ccaccacaaa cacttcacct ttcatcggga
    13141 taaaggcctg agtacccagc ggatgacgtt cgagttcgtg aatggtcagc ggcagattcg
    13201 ccggttgcgc tcgattaatg ctgataagcg tacggtcttg ctcaagaatc tcaaccagcg
    13261 ccaaatcgtg gtaacgctcc accaggccat tgttaatatg gaaaaaatcc cgttgctgcg
    13321 tttcgattac gtcgccataa gcactaaagg cttcctgact taacggtaat acctgaagtt
    13381 tcatcttttt gtccttgtaa cataattccg ttcaaccagc gccgaccggt cagcttggtt
    13441 tcaataacag gcaatctaaa accttaagag aacaacatca atacaaaaat tggaatattt
    13501 ttccaaaact agatttggtc cacaaattga acagggttat catgtaaaaa tactgataaa
    13561 tcagaggata agaaaatcac gcaacttgcg gatttaaaag gggatacctg aagatgttcg
    13621 atccagaaac cttgcggact ttcattgcgg ttgctgaaac aggaagtttt tcaaaagcgg
    13681 cagaacgatt atgtaaaacc acggcgacga tcagttatcg cattaaactt ctggaagaga
    13741 ataccggagt agcgctgttt ttccgcacga ctcgcagcgt gacgttgaca gcggctggcg
    13801 agcatctact ttcccaggcc agagactggc tgagctggct ggaaagtatg cccagcgagt
    13861 tgcaacaggt gaatgatggc gtggaacgcc aggtgaatat tgtcatcaac aacctgctct
    13921 ataaccccca ggccgtcgcc cagttgctgg cgtggctgaa tgagcgttac ccctttaccc
    13981 agtttcacat ctcccgacaa atctatatgg gcgtctggga ctcgctattg tacgaaggtt
    14041 tttcgctggc tatcggcgtc acgggaactg aggcgctggc aaataccttt agtcttgatc
    14101 ccttaggatc ggtgcaatgg cgatttgtca tggcggcgga tcatccgctg gcgaacgttg
    14161 aagagccgct aacagaagcg cagttgcggc gctttccggc ggtcaatatt gaagacagcg
    14221 cccgcacctt aaccaaacgc gtcgcctggc gattgccagg ggaaaaagag attattgttc
    14281 ctgatatgga aacgaaaatc gccgcccatc tggcgggcgt tggcattggt tttttgccaa
    14341 aatcgctttg ccagtcaatg atcgataatc aacaactggt cagccgggta atcccaacga
    14401 tgcgccctcc ttcgccattg agtctggcat ggcgcaaatt tggcagcggc aaagcggtag
    14461 aagatattgt gaccttgttt acccagcgca ggccggaaat cagcggattt ttagaaattt
    14521 tcggcaaccc acgcagttaa aaatcaagtt tccttgcgcg ttggcgcgta aaatagcgcg
    14581 caagctgatt tgaggttcac ttttaactat gcaagagaga cacacggaac aggactatcg
    14641 tgccctgctg attgctgata cgcccattat tgatgttcgc gcccctatcg agtttgagca
    14701 aggcgcaatg cccgccgcta tcaatctgcc gttaatgaat aacgatgaac gcgccgccgt
    14761 tggcacctgc tataaacagc aagggtcaga cgcagcgctg gcgctgggac ataaactggt
    14821 ggcgggtgaa attcgtcagc agcgcataga cgcctggcgg gcagcgtgcc tgcaaaatcc
    14881 gcaaggtatt ctctgctgcg cccgtggcgg tcaacgctca catattgtgc aaagctggtt
    14941 gcatgcagcg gggattgatt atccgctggt ggaaggcggt tataaggcac tgcgccagac
    15001 cgcgattcag gcgactattg aactcgcaca aaaaccgata gtgctgattg gcggttgtac
    15061 cggcagcggt aaaacgctgt tagtgcagca acagccgaac ggtgttgatc tggaagggtt
    15121 agcgcgtcat cgcggttcgg cgtttggtcg caccttacaa ccacaactta gccaggcgag
    15181 ttttgaaaac ctgctggctg ccgaaatgct aaaaaccgac gcccgtcagg atttgcgcct
    15241 gtgggtgctg gaagacgaaa gccggatgat cggttcgaat cacctgccgg aatgcctgcg
    15301 cgagcgaatg actcaggcgg cgattgcggt ggtagaagat ccgtttgaga tccgtcttga
    15361 gcgcctgaac gaagagtatt tcttgcgtat gcatcatgat tttacccacg cgtacggcga
    15421 cgaacagggc tggcaggaat attgcgaata cctgcatcac ggactttcgg ctattaagcg
    15481 tcggctgggg ctacagcgat ataacgaact ggctgcaagg ctggatgcag cactgacaac
    15541 gcaactcacc accggcagca ccgacggtca tctggcctgg ctggtgccgt tacttgaaga
    15601 atattacgac ccgatgtatc gctatcagct tgagaaaaaa gcggaaaaag ttgtctttcg
    15661 cggtgagtgg gcggaagtgg cggaatgggt taaggcgcag tgatgggcgg tattctgaaa
    15721 cggcgattgt cg
//
LOCUS       DAJVTL010000105        15255 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.107, whole genome shotgun sequence.
ACCESSION   DAJVTL010000105 DAJVTL010000000
VERSION     DAJVTL010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15255
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.107"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            24..1388
                     /locus_tag="OQQ26_003159"
     CDS             24..1388
                     /locus_tag="OQQ26_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1858523.1"
                     /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH
                     KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK
                     MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPP
                     HVSSLRIEIPANIAANEALKVHLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFDVEQA
                     IRQA"
     gene            complement(1516..2007)
                     /gene="yajQ"
                     /locus_tag="OQQ26_003160"
     CDS             complement(1516..2007)
                     /gene="yajQ"
                     /locus_tag="OQQ26_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414960.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide binding protein YajQ"
                     /protein_id="HCS1858524.1"
                     /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA
                     SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
                     ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
                     FRD"
     gene            2175..3086
                     /gene="panE"
                     /locus_tag="OQQ26_003161"
     CDS             2175..3086
                     /gene="panE"
                     /locus_tag="OQQ26_003161"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HCS1858525.1"
                     /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVET
                     DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGA
                     IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
                     PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
                     GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
                     ENTRLFEMVKRKESEYERIGTGLPRPW"
     gene            3049..3639
                     /gene="yajL"
                     /locus_tag="OQQ26_003162"
     CDS             3049..3639
                     /gene="yajL"
                     /locus_tag="OQQ26_003162"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HCS1858526.1"
                     /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA
                     ITCSRSVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV
                     AAICASPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(3693..5141)
                     /gene="thiI"
                     /locus_tag="OQQ26_003163"
     CDS             complement(3693..5141)
                     /gene="thiI"
                     /locus_tag="OQQ26_003163"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HCS1858527.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDEKQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL
                     EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIAQQTE
                     QEVVEVETVNGFGPNDVILDIRSIDEQEDNPLKVEGIDVVSLPFYKLSTKFGDLDQNK
                     TWLLWCERGVMSRLQALYLREQGFNNVKVYRP"
     gene            5347..5589
                     /gene="xseB"
                     /locus_tag="OQQ26_003164"
     CDS             5347..5589
                     /gene="xseB"
                     /locus_tag="OQQ26_003164"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HCS1858528.1"
                     /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
     gene            5589..6488
                     /gene="ispA"
                     /locus_tag="OQQ26_003165"
     CDS             5589..6488
                     /gene="ispA"
                     /locus_tag="OQQ26_003165"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HCS1858529.1"
                     /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
                     KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     VKFGEANAILAGDALQTLAFSILSDSDMPEVSDRDRISMISELASASGIAGMCGGQAL
                     DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ
                     LAEQSLDTSALEALADYIIQRNK"
     gene            6513..8375
                     /gene="dxs"
                     /locus_tag="OQQ26_003166"
     CDS             6513..8375
                     /gene="dxs"
                     /locus_tag="OQQ26_003166"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HCS1858530.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
                     FEAMNHAGDILPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
                     KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
                     STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
                     PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI
                     LNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
     gene            8430..9404
                     /gene="yajO"
                     /locus_tag="OQQ26_003167"
     CDS             8430..9404
                     /gene="yajO"
                     /locus_tag="OQQ26_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxyxylulose-5-phosphate synthase YajO"
                     /protein_id="HCS1858531.1"
                     /translation="MQYNPLGKTDLRVSRLCLGSMTFGEPDRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR
                     LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
                     PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK"
     gene            complement(9458..9976)
                     /gene="pgpA"
                     /locus_tag="OQQ26_003168"
     CDS             complement(9458..9976)
                     /gene="pgpA"
                     /locus_tag="OQQ26_003168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HCS1858532.1"
                     /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGILS"
     gene            complement(9954..10931)
                     /gene="thiL"
                     /locus_tag="OQQ26_003169"
     CDS             complement(9954..10931)
                     /gene="thiL"
                     /locus_tag="OQQ26_003169"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HCS1858533.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
                     FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
                     PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
                     SDLGHIVKASDCGARIDLALLPFSDALSHHVEPEQALRWALSGGEDYELCFMVPELNR
                     GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP"
     gene            complement(11009..11428)
                     /gene="nusB"
                     /locus_tag="OQQ26_003170"
     CDS             complement(11009..11428)
                     /gene="nusB"
                     /locus_tag="OQQ26_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HCS1858534.1"
                     /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
                     AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            complement(11448..11918)
                     /gene="ribE"
                     /locus_tag="OQQ26_003171"
     CDS             complement(11448..11918)
                     /gene="ribE"
                     /locus_tag="OQQ26_003171"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HCS1858535.1"
                     /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
                     KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
                     HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            complement(12007..13110)
                     /gene="ribD"
                     /locus_tag="OQQ26_003172"
     CDS             complement(12007..13110)
                     /gene="ribD"
                     /locus_tag="OQQ26_003172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HCS1858536.1"
                     /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
                     RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQD
                     PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
                     TAMASGESQWITSPQARRDVQRLRSQSHAILTSSATVLADDPALIVRWSELDEQTQAL
                     YPQQNLRQPVRIVIDSQNRVTPGHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHK
                     GHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC
                     TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
     gene            complement(13114..13563)
                     /gene="nrdR"
                     /locus_tag="OQQ26_003173"
     CDS             complement(13114..13563)
                     /gene="nrdR"
                     /locus_tag="OQQ26_003173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HCS1858537.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
     gene            13714..14253
                     /locus_tag="OQQ26_003174"
     CDS             13714..14253
                     /locus_tag="OQQ26_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001430049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HCS1858538.1"
                     /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN
                     KETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGTLRMSLVNITPDTDGTTLTLR
                     IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG
                     ISVEQLDFVRIHDIQPVMY"
     gene            14552..>15255
                     /gene="tsx"
                     /locus_tag="OQQ26_003175"
     CDS             14552..>15255
                     /gene="tsx"
                     /locus_tag="OQQ26_003175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HCS1858539.1"
                     /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
                     YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
                     EPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMS
                     LSMNIYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
                     DDSGNAINGIKTRTNNS"
BASE COUNT         3715 a         4038 c         3950 g         3552 t
ORIGIN      
        1 gcgaatttaa aacagaggtg gtaatgaacg attataaaat gacgccaggt gagcggcgcg
       61 cgacctgggg tttagggacc gtattctcgt tgcgcatgct gggcatgttc atggttctgc
      121 cggttctgac cacgtacggc atggctctgc aaggtgccag cgaagcatta atcggtattg
      181 ccattggtat ttatggtctg actcaggccg tttttcagat tccgtttggc ctgctttccg
      241 accgcattgg tcgcaaacca ttaattgtcg gtgggctggc agtgtttgcc gccggtagcg
      301 ttatcgctgc gctttccgac tctatctggg gaattattct gggccgggcg ttacaaggct
      361 ctggagcgat tgccgccgcc gttatggcgc tgctttccga tctcacgcgc gaacaaaacc
      421 gcaccaaagc aatggcgttt atcggcgtga gctttggcat tacctttgcc attgcgatgg
      481 tgcttggccc gatcatcact cacaaacttg ggctgcacgc gctattctgg atgatcgcta
      541 ttctggcaac aaccggcatt gcgttgacca tttgggttgt gcccaacagt agcactcacg
      601 tacttaatcg tgaatccggg atggtgaaag gcagtttcag taaagtactg gcggaaccgc
      661 ggctgctgaa actcaacttt ggcattatgt gtctgcacat gcttctgatg tctacgtttg
      721 ttgccctgcc cggacagctg gctgatgcgg ggttcccggc ggctgaacac tggaaggtat
      781 atctggcgac gatgctaatc gcctttggct cggtcgtgcc tttcattatc tacgctgaag
      841 ttaagcgcaa aatgaagcaa gtctttgtct tctgcgtcgg gttgatcgtg gttgcggaaa
      901 ttgtgttgtg gaacgcgcaa acgcagttct ggcaactggt ggtcggcgtg cagcttttct
      961 ttgtggcgtt taatttgatg gaagccctcc tgccctcact tatcagtaaa gagtcgccag
     1021 caggttacaa aggtacggcg atgggtgttt actccaccag ccagtttctt ggcgtggcga
     1081 ttggcggttc actgggcggc tggattgacg gcatgtttga cggtcagggg gtatttctcg
     1141 ctggcgcaat gctggccgca gtgtggctgg cagtcgccag taccatgaaa gaaccgccgc
     1201 atgtcagcag tttgcgcatt gaaatcccgg cgaacattgc cgcaaacgag gcgttaaaag
     1261 tgcatttgct agaaactgaa ggcatcaaag aagtgttgat tgcagaagaa gaacattcag
     1321 cttatgtgaa aatcgacagc aaagtgacga atcgctttga tgttgaacag gcaattcgcc
     1381 aggcataaaa gcgaggcgaa aatgcctgct gcgctacgct tatcaggcct actaatctcc
     1441 tgatttacaa acccttgtag gccgaaccag gcgttcatgc cgcatctgac atgaacaaag
     1501 cgcaggttgt cgcgattaat cgcggaagtt tttgaactgg aacggctgac ccagatcgcc
     1561 accacgtacc atcgccatga cagcctgtaa atcatcacga gatttgcccg tcacacggat
     1621 ctcatcgccc tgaatttgcg cctgcacttt cagtttgctg tctttgatca tcttgacgat
     1681 ttttttctga gtggcgctct caatgccctg tttcagtttc gcttccacaa accaggtttt
     1741 accgctatga acgatatttt ccggtacatc cagtgaactg ccttcaatgc cgcgcttcag
     1801 cagcttggca cgcagaatat ccagcaactg attgacctgg aagtcggact cgctcaacac
     1861 tttgatggtt ttgctggcgt cgttcagctc aaatgaggct tcaacgttac ggaagtcaaa
     1921 acgggactcc acttcgcggc tcgcgttatc gaccgcgtta cgtgcttcct gaagatcaac
     1981 ttcagagaca atatcgaaag atggcatctt ttcctctccc ttcatttttg atgcgaagca
     2041 taatacctgt aaagttaaat aaccaacagt cctgcaccag gacgtatccc ttaattgtgc
     2101 atagtcgcaa cagcatgcac aattaaggga tagccttatt gaacacccgg agtggttgcg
     2161 ggtgaggagg aacaatgaaa attaccgtat tgggatgcgg tgccttaggg caattatggc
     2221 ttacagcact ttgtaaacag ggtcacgaag ttcagggctg gctgcgcgta ccgcaacctt
     2281 attgtagtgt gaatctggtt gagactgatg gttcgatatt taacgaatcg ctgaccgcca
     2341 acgatcccga ttttcttgcc accagcgatc tgctcctggt gacgctgaaa gcgtggcagg
     2401 tttccgatgc cgtcaaaagc ctcgcgtcca cactgcctgt aactacgcca atactgttaa
     2461 ttcacaacgg catgggcgcc atcgaagaat tgcaaaacat tcagcagcca ttactgatgg
     2521 gcaccaccac ccatgccgcc cgccgcgacg gcaatgtcat tattcatgtg gcaaacggta
     2581 tcacgcatat tggtccagca cggcaacagg acggcgatta cagttatctg gcggatattt
     2641 tgcaaaccgt gttgcctgac gttgcctggc ataacaatat tcgcgccgag ctgtggcgca
     2701 agctggcagt caactgtgtg attaatccac tgactgccat ctggaattgc ccgaacggtg
     2761 aattacgtca tcatccgcaa gaaattatgc aaatatgcga agaagtcgcg gcagtgatcg
     2821 aacgcgaagg gcatcatact tcagcggaag atttgcgtga ttacgtgatg caggtgattg
     2881 atgccacagc ggaaaatatc tcgtcgatgt tgcaggatat ccgcgcgctg cgccacaccg
     2941 aaatcgacta tatcaatggt tttctcttac gccgcgcccg cgcgcatggg attgccgtac
     3001 cggaaaacac ccgcctgttt gaaatggtaa aaagaaagga gagtgaatat gagcgcatcg
     3061 gcactggttt gcctcgcccc tggtagtgaa gagactgaag ccgtcaccac tatcgatctg
     3121 ctggttcgcg gcggtatcaa agtcaccact gccagcgtcg ccagcgatgg taacctggcg
     3181 attacctgct cgcgcagcgt gaagctgctg gcggatgcgc cgctggtcga agtggctgat
     3241 ggcgaatatg acgtgatcgt gctgcctggc ggcattaaag gcgcggagtg ttttcgcgat
     3301 agcaccctgc tggttgaaac cgttaaacag ttccaccgtt ccgggcgtat cgtcgcggct
     3361 atttgcgcct cgccagccac cgtgctggtg ccgcacgata tcttcccgat tggcaatatg
     3421 accggcttcc caacgctgaa agacaaaatt cccgctgaac aatggcagga caagcgcgtc
     3481 gtctgggatg cacgagtaaa attgctgacc agccaggggc cgggtacagc tatcgacttt
     3541 ggtctgaaaa ttatcgacct gctggttggg cgcgagaaag cccatgaagt ggcatcacaa
     3601 ctggtgatgg cggcagggat ttataattat tacgagtagt gtcggatgcg gcaaacgtcg
     3661 catctgacca gatgcgacgt aaaaaacaca aattatgggc gataaacctt cacattgtta
     3721 aagccctgct cgcgcagata gagcgcctgc agacggctca tcaccccgcg ctcacaccac
     3781 agcagccagg ttttgttctg gtcgagatcg ccaaatttgg tgctcagttt atagaacggc
     3841 agagaaacca catcaatccc ttcaactttc agaggattat cttcttgttc atcgatagaa
     3901 cggatatcga ggatcacgtc gttcggaccg aagccattga cggtttccac ttccaccact
     3961 tcctgctcgg tctgctgggc gatttcgcgg atatcaacgt tattcgcctc ctcaaccact
     4021 ttatcgagaa tactgaagtc gaacttctct tcttccgctt caatcttcga cttaaccgct
     4081 ttcaccgtcg ggcttttgga gataacaccg caatattccg gcatcgtgcg agcaaagtct
     4141 tcggtgccaa tctggcgagc caggttgatg atgtgctctt tgtcgtaaga gatcagcgga
     4201 cgcaggatca gcgtgtcaga gacgttatca atcaggcgca ggttggtcag cgtctggctg
     4261 gacacctggc cgagcgcttc accggtgacc agcgcctgta cgccgtaacg ttctgccact
     4321 ttagacgcgg cacgcaccat catacgtttg aggataacgc ccatctgacc gtcgtcgatt
     4381 ttctcgagaa tttccccgac gacaggttcg aaattaatgg cgacaaaacg cacgcggtgg
     4441 gagctgccaa agcggttcca cagataatgc gccacctgac gcacgccaat ttcatgcgct
     4501 gcgccgccga ggttaaagaa gcagtaatgc acgcggcagc cgcgacgcat caacatataa
     4561 ctggaaacac cggagtcgaa accaccggaa atgagcgaca gcacatcttc ctgggtgcca
     4621 atcgggaaac caccaatacc ttcgtagcgg cctttaatca gcagaagacg atcgtcttcc
     4681 acttccagat ggacagttac atccgggtta gtcagcttca cgcgcgcgga ttcaatatgc
     4741 tgatttaaac cgccgccgac gtaacgttcc acatcaatcg agctaaaatc atgtttgcca
     4801 cggcgcttca cgcgtacgca gaaggttttg ccttccagct gatcgcgata ttgaaccaac
     4861 gctttctcga aaatatcgtg catgtcggta aacggcacgt cttcgacttc gagaatatgg
     4921 tggatacccg gaatacgggt cagggcgtcg cgaatagcca gacgctgttt ttcatctttt
     4981 gcgcgaactt cgatgttatc ccagtggcgg acgacagcga gcgtctcatc atagtgcttt
     5041 aaaacgttac gaatgttccc ggtaaggatt tttataaagc gcaagcgcac agattggctt
     5101 ttgatggtga tttccgggaa caatttaatg ataaacttca tggcggcaat ggttcgttgg
     5161 caagccttaa gcgacttgta tagggaaaaa tacagcagcc cacacctgcg gctgcatcca
     5221 ggcgcggaag tataccacta acatcgcttt gctgcgcaca tcaccttacc attgcgcgtt
     5281 atttgctatt tgccctgagt ccgttaccat gacggggcga aaaatattga gagtcagaca
     5341 ttcattatgc cgaagaaaaa tgaggcgccc gccagctttg aaaaggcgct gagcgagctg
     5401 gaacagattg taacccgtct ggaaagtggc gacctgccgc tggaagaggc gctgaacgag
     5461 ttcgaacgcg gcgtgcaact ggcacgtcag gggcaggcca aattacaaca agccgaacag
     5521 cgcgtacaaa ttctgctgtc tgacaatgaa gacgcctctc taaccccttt tacaccggac
     5581 aatgagtaat ggactttccg cagcaactcg aagcctgcgt taagcaggcc aaccaggcgc
     5641 tgagccgttt tatcgcccca ctgccctttc agaacactcc cgtggtcgaa accatgcagt
     5701 atggcgcatt attaggtggt aagcgtctgc gacctttcct ggtttatgcc accggtcata
     5761 tgttcggcgt tagcacaaac acgctggacg cacccgctgc cgccgttgag tgtatccacg
     5821 cttactcatt aattcatgat gatttaccgg cgatggatga tgacgatctg cgtcgcggtt
     5881 tgccgacctg ccatgtgaag tttggcgaag cgaacgcgat tctcgctggc gatgctttac
     5941 aaacgctggc gttctcgatt ttaagcgatt ctgatatgcc ggaagtgtcg gatcgcgaca
     6001 gaatttcgat gatttctgaa ctggcgagcg ccagcggtat tgccggaatg tgtggtggtc
     6061 aggcgttgga tttagacgcg gaaggcaaac acgtacctct ggacgcgctt gagcgtattc
     6121 atcgtcataa aaccggcgca ttgattcgcg ccgccgttcg ccttggtgca ttaagcgccg
     6181 gagataaagg gcgtcgtgct ctgccagtac tcgacaagta cgcagagagc atcggccttg
     6241 ccttccaggt tcaggatgac atcctggatg tggtaggaga tactgcaacg ttgggaaaac
     6301 gccagggtgc cgaccagcaa cttggtaaaa gtacctaccc tgcacttctg ggtcttgagc
     6361 aagcccggaa gaaagcccgg gatctgatcg acgatgcccg tcagtcgctg aaacaactgg
     6421 ctgaacaatc actcgatacc tcggcactgg aagcgctagc ggactacatc atccagcgta
     6481 ataaataaac aataagtatt aataggcccc tgatgagttt tgatattgcc aaatacccga
     6541 ccctggcact ggtcgactcc acccaggagt tacgactgtt gccgaaagag agtttaccga
     6601 aactctgcga cgaactgcgc cgctatttac tcgacagcgt gagccgttcc agcgggcact
     6661 tcgcctccgg gctgggcacg gtcgaactga ccgtggcgct gcactatgtc tacaacaccc
     6721 cgtttgacca attgatctgg gatgtggggc atcaggctta tccgcataaa attttgaccg
     6781 gacgccgcga caaaatcggc accatccgtc agaaaggcgg cctgcacccg ttcccgtggc
     6841 gcggcgaaag cgaatatgac gtattaagcg tcgggcattc atcaacctcc atcagtgccg
     6901 gaattggtat tgcggttgct gccgagaaag aaggcaaaaa tcgccgcacc gtctgtgtaa
     6961 tcggcgatgg cgcgattacc gcaggcatgg cgtttgaagc gatgaatcac gcgggcgata
     7021 tccttcctga tatgctggtg gtcctcaacg acaacgaaat gtccatttcc gaaaatgttg
     7081 gcgcgctcaa caaccatctg gcgcagctgc tttccggtaa gctttactct tcactgcgcg
     7141 aaggcgggaa aaaagttttc tctggcgttc cgccaattaa agagctgctc aaacgcaccg
     7201 aagaacatat taaaggcatg gtagtccctg gcacgttgtt tgaagagctg ggctttaact
     7261 acatcggccc ggtggacggt cacgatgtgc tggggcttat caccacgcta aagaacatgc
     7321 gcgacctgaa aggcccgcag ttcctgcata tcatgaccaa aaaaggtcgt ggttatgaac
     7381 cggcagaaaa agacccgatc actttccacg ccgtgcctaa atttgatccc tccagcggtt
     7441 gtttgccgaa aagtagcggc ggtttgccga gctattcaaa aatctttggc gactggttgt
     7501 gcgaaaccgc agcgaaagac aacaagctaa tggcgattac tccggcgatg cgagaaggtt
     7561 ccggcatggt cgagttttca cgtaaattcc cggatcgcta cttcgacgtg gctattgccg
     7621 agcaacacgc agtgaccttt gccgccggtc tggcgattgg tggatacaaa cccattgtcg
     7681 cgatctactc caccttcctg caacgcgcct atgatcaggt gctgcatgac gtggcaattc
     7741 aaaagctacc ggtcctgttc gccattgacc gcgcgggcat tgttggtgct gacggtcaaa
     7801 ctcaccaggg cgcttttgat ctctcttacc tgcgctgcat accagaaatg gtcattatga
     7861 ccccgagcga tgaaaacgaa tgtcgccaga tgctctatac cggctatcac tataacgatg
     7921 gcccgtcagc ggtgcgctac ccgcgtggca acgcggtcgg cgtggaactg acgccgctgg
     7981 aaaaactacc aattggcaaa ggcattgtga agcgtcgtgg cgagaaactg gcgatcctta
     8041 actttggtac gctgatgcca gaagcggcga aagtcgccga atcgctgaac gccacgctgg
     8101 tcgatatgcg ttttgtgaaa ccgcttgatg aagcgttaat tctggaaatg gccgccagtc
     8161 atgaagcact ggttaccgta gaagaaaacg ccattatggg cggtgcaggc agcggagtga
     8221 acgaagtgct aatggcccat cgtaaaccag tacccgtgct gaacattggc ctgcctgact
     8281 tctttattcc acaaggaact caggaagaaa tgcgcgccga actcggcctc gatgccgccg
     8341 gtatggaagc caaaatcaag gcctggctgg cataatccct actccactcc tgctatgctt
     8401 aagaaattat tcatggcagg agtggcagca tgcaatacaa ccccttagga aaaaccgacc
     8461 ttcgcgtttc ccgactttgc ctcggcagta tgacctttgg cgagccagat cgcggtaatc
     8521 acgcatggac actgccggaa gagagcagcc gtcccataat taaacgcgcg ctggaaggcg
     8581 gcataaattt ctttgatacc gccaatagct attccgatgg tagcagcgaa gagatcgttg
     8641 gtcgcgcact gcgggatttc gcccgtcgtg aagacgtggt cgttgccacc aaagtgttcc
     8701 atcgcgttgg tgatttaccg gaaggattat cccgtgcaca aattttgcgc tctatcgacg
     8761 acagcctgcg acgtctcggc atggattatg tcgatatcct gcaaattcat cgctgggatt
     8821 acaacacgcc gatcgaagag acgctggaag ccctgaacga cgtggtaaaa gccgggaaag
     8881 cgcgttatat cggcgcgtca tccatgcacg cttcgcagtt tgctcaggcg ctggaactac
     8941 aaaaacaaca tggctgggcg cagtttgtca gtatgcagga tcactacaat ctgatttatc
     9001 gcgaagaaga gcgcgagatg ctgcctctgt gttatcagga gggcgtggcg gtgattccgt
     9061 ggagcccgct ggcgcggggg cgactgacgc gtccgtgggg agaaactacc gcacgactgg
     9121 tgtctgatga ggtggggaaa aatctctata aagaaagcga tgaaaatgac gcgcagatcg
     9181 cagagcggtt aacgggcgtc agtgaagaac tcggtgcaac acgagcacaa gttgcgctgg
     9241 cctggttgtt gagtaaaccg ggcattgccg caccgattat cggaacttcg cgggaagaac
     9301 agcttgatga gctattgaac gcggtggata tcactttgaa gccagaacag attgccgaac
     9361 tggaaacgcc gtataaacca catccggtcg taggatttaa ataagagtcc aggcctgatg
     9421 agacgcaaca agcgtcacat caggcatcgg tgcacaacta cgacagaatg cccagcggcc
     9481 agtgatgacc aataaagtac aggatgccag cggagatcac cccggcgaca atatcgtcga
     9541 tcatgattcc catgccgcca tgcacattgc gatcaaacca gcggatcggc cacggtttcc
     9601 acatatccag gatacggaaa atcacaaacc cggcggcgac ccactgccag tcattggtcg
     9661 gcagcgccat gagcgtgatc cacataccaa taaattcgtc ccagacaatg ctgccgtgat
     9721 cgtgcacacc catatctttt gcggtctgat gacaaagata gacgccgata cagatcccca
     9781 gcatcaccac cagcgagtag agctgccagg gcaaaaaggt catcagatac cagaacggaa
     9841 tcgctgccag cgagcccatc gtcccaggaa cgatcgggct taatccactt ccgaatccga
     9901 cagcaagcag atgccacgga ttactcatct tcaggcgact tttcgcgaca tctttatggc
     9961 gtggcaaaat ggtcatatcc tttccagtct aacgtgacag gttcgccgtc acgaataaaa
    10021 caaagccctt cgatatcggc ggtcatttgc ccgatacagg taaacggtac gcccagatgt
    10081 cccaaagcga catccagcgc gccacggttc agttccggca ccatgaaaca caactcgtaa
    10141 tcttcaccgc cagagagcgc ccagcgcaac gcctgttcag gttcaacatg gtgagaaagc
    10201 gcatcagaaa acggcagcaa tgccaagtca atacgtgcgc cgcagtcgct ggctttcacg
    10261 atatgcccga gatcggaaat cagaccgtca gagagatcga tagctgaatt tgccagatcg
    10321 cgcagtgcct gcccctgtaa aatacgcggc gatggacgga gatgacgttt gatcaagtag
    10381 tccgcatctt tagcatcggc aacctgcaaa cggttttgca aaatcgccag cccggcggcg
    10441 ctatcgcccg gtgtaccggt cacatagatc cagtcacctg gtttcgcccc agagcgcgtt
    10501 aaggctcgtc ccatcggaac aaagccgtgg atacccaacg tcattgataa tggcccacgc
    10561 gtagtatcgc cgccaatgag ttgcatatcg taataattga gaagatcaaa caaactgtcg
    10621 ctgaaggact caagccacgc ttcgtctacg tccggtaagg ttaatgccag cgtcagccat
    10681 gccggatcgg cccccatcgc tgccagatcg cttaggttca ccgccagtgc tttataagcc
    10741 agatcagcag gatcgatatc agggaggaaa tggttgcccg ccaccagcgt atcagtgctg
    10801 atcgccaggg tctgtttctc ggggatattg agaagagcgc aatcgtcgcc gatgcccagt
    10861 tcgacatcaa gacgagaact tcttacacgg tcaaaataac gggcaatcag ggagaactcg
    10921 ccacatgcca tacgctatgc ctcagcaggt aaaaaagaaa aggccggcga tcgcggaacg
    10981 gtcttccgtg aatctaccgg cctggatatc actttttgtt agggcgaatc acaggtgctg
    11041 ctttatcgag tacgccgttg acgaacttat ggctgtcttc tgcgccgaac gatttcgcca
    11101 gttcgatcgc ttcgttaatg gccactttgt atggcacatc gctacgttta gacagctcgt
    11161 acagcgcaat gcgcagtact gctttttcta cctgtcccag ttcttccagc aggcgggaca
    11221 ggtatggctt catcagtccg tcgaggtatg cggtgttagt cgccaccccg gccagcagct
    11281 cacggaagta caggacgtca acgtctttta catcctgttc agccaggaac tggtattcaa
    11341 catcagcgat gtcgttctgg gacaactgcc aggagtagag cgcctggacg gcacactcac
    11401 gagcgcggcg acgagcagca ggtttcacgg atttcccctt actaatttca ggccttgatg
    11461 gctttcaata cattaatcat ttcaagcgcg gtcagtgcag cttctgcacc tttgttgcca
    11521 gctttggtgc cagcacgttc gatcgcttgt tcaatgcttt cagtggtcag aaccccaaaa
    11581 gcaaccggaa tttcgctgtc ctgggcaaca tgcgccaggc cgttgcttgc accaccagcg
    11641 acatattcaa agtgggcagt gccaccacga ataaccgtac ccagcgcaat caccgcgtcg
    11701 tatttaccgg ttttagccag tgcacccgcc gccagcggca gctcataggc accaggcacc
    11761 caaacaacgg taatgttttc atcttttacc tgaccgatac gtttcagtgc gtcaattgca
    11821 ccttccagca ggctgtcatt gataaagttg ttgaaacgcg cgatggtgat ggcgacgcga
    11881 gcgtccgggg tagcaacgtt agcttcaata atgttcattt tcttccttcg ggttcgagta
    11941 tggccccgca ggggggcgga ttttagcata atatttcgtg cgctgcttcc ctttcgagcc
    12001 gggagatcat gcacccacta aatgcaggca aacatccggg cctacatgac gtatctcttt
    12061 gaatttaaat tggggggcgt cggctaattt ctcaagccct ggcagcgtgc ataatccgcg
    12121 ggcgtcgctg cctaatagtt taggtgcaat atagacaatc agctcatcga ctaaacccgc
    12181 ctgcagcaat gcgccagcga gcgttggccc cgcttccacc cagatgctgt taatttgctg
    12241 tttacccagt tgcatcatca gtacaaccag atccagatga cctttatgct ctggaatcag
    12301 caaggtacgc accgtttccg gccactcacg agaatcttcc tgcgtacgcg cgaaccaggt
    12361 ttcgccgggc tgctgcacaa tgcgatgtcc cggcgtcacg cgattttggc tgtcaatcac
    12421 aatacgtacc ggctgacgga gattttgttg cgggtagagc gcctgagttt gttcatccag
    12481 ttcggaccaa cgcactatta aggctggatc atccgccagc accgtggcgc tgctggttaa
    12541 aatggcatga ctttgcgagc gcagtcgttg tacgtcgcgc cgcgcctgag gcgaagtgat
    12601 ccactggctt tcgccgctcg ccatcgccgt gcgaccatca agcgatgcgc caagttttaa
    12661 ctgaatataa ggaaagccgg tgcgcatccg cttgagaaag cctttattca attgctcggc
    12721 ttcactcatc atcaggccgt ggctgacgtc aatgccagcc tgttgcagac ggtaaagtcc
    12781 acgtccagca acctgcggat tcgggtcctg catcgcggcg accacgcgcg ctacgccagc
    12841 ggcgatgagt gcgtcacagc acggtggcgt acgaccatga tggctacagg gttcgagtgt
    12901 gacataggcg gtcgcacctt tggctttttc acccgccata cgcaacgcgt gtacttcggc
    12961 atgtggttca cccgctcgtt ggtggtaacc ttcaccgaca atttcgccat ctttgacaat
    13021 gacgcacccg acattcgggt tgggatgcgt ggtaaaacgt cctcgttgcg ccagctttag
    13081 cgcccgcgcc atgtaatact cgtcctgcac ggcttagtcc tccaggcgcg cgatctcttc
    13141 gccaaattct ttgatatctt cgaaactgcg gtagacagag gcaaaacgga tataggcgac
    13201 tttatcgagc tttttcaatt gctccatcac cagattgcca atcatcttgc tcggcacttc
    13261 gcgctcaccg gtggcgcgca gctgcgattt aatatgattg attgccattt caacgtcatc
    13321 ggaacttacc ggacgttttt ccagcgcccg cagcattccg ctacgcaatt tctcttcatt
    13381 aaacggttca cgcacgtcgt tgctttttac aacacgcggc ataaccagct ccgccacttc
    13441 aaaggtggtg aaacgttcat tacacaccag acactgccga cggcggcgta cggatgaacc
    13501 ctcgcccacg agacgagagt caattacctt agtgtccacg gcgaaacaga atgggcaatg
    13561 catacggcgt cctgaccagg tggttaacag aaatctattt taccctgaac tgacgataca
    13621 acaaaggcgc aacgcttttg agataaagga tcgatgcttt cgctgctttt accctctacc
    13681 attaggctaa ttgcgacgag aaagggacta cctatgaata ctaacgtttt tcgactgctc
    13741 ctgctgggaa gcctgttcag ccttagcgcc tgtgtgcagc aaagcgaagt gcgacagatg
    13801 aaacacagcg tcagcacgct gaaccaggag atgacgcaac tcaataaaga aactgtcaaa
    13861 atcactcagc aaaacaggct gaatgcaaaa tccagcagtg gggtttacct tctgcctgga
    13921 gcgaaaacac cggcaagact agaaagccag atcggtactt tacgtatgtc gctggtgaat
    13981 attacgcctg atacagatgg caccaccctg acgctacgta ttcagggcga gtcgaatgat
    14041 cccttgcccg cattcagtgg aaccgttgaa tatgggcaaa ttcagggaac aatagacaac
    14101 tttcaggaaa tcaatgtgca gaatcaattg attaatgccc ctgccagcgt cctcgccccc
    14161 agcgatgttg atattccgtt acagttaaag ggtatttctg tagaacagtt agactttgta
    14221 cgtatccacg acattcaacc tgttatgtat taaacgtatt gcggggcgat tttgtgcgtc
    14281 ccgcaacatc tttccccatc attttgttac tccgcttaca tcacccagat tgatagtaaa
    14341 agtttgcaac aagggtgaaa gtcagtacaa tccctgcccg aatgtgtgta aacgtgaacg
    14401 caatcgatta cgtaaatgat agaactgtga aacgaaacat atttttgtga gcaatgattt
    14461 ttataataga ctcctctgta tacgaaatat ttagaaacgc aatttgcgcc tttttcactc
    14521 ccgcaaggga ttttcaaaca gtggcataca tatgaaaaaa acattactgg cagccggtgc
    14581 ggtactggcg ctctcttcgt cttttactgt caacgcagct gaaaacgaca aaccgcagta
    14641 tctttccgac tggtggcacc agagcgttaa cgttgtcgga agctatcaca cccgtttcgg
    14701 accgcagatc cgcaacgata cctaccttga gtacgaagca ttcgctaaaa aagactggtt
    14761 cgacttctat ggttatgcgg atgcgccggt attcttcggc ggtaactccg atgctaaagg
    14821 tatctggaac cacggttctc cgctgtttat ggaaatcgaa ccacgtttct ccatcgacaa
    14881 gctgaccaat actgacctta gcttcggtcc gttcaaagag tggtacttcg cgaacaacta
    14941 catttacgac atgggtcgta ataaagatgg tcgccagagc acctggtaca tggggctggg
    15001 taccgatatc gacactggcc tgccgatgag cctgtccatg aacatctatg cgaaatacca
    15061 gtggcagaac tatggcgcag cgaacgaaaa cgagtgggac ggttaccgtt tcaaaattaa
    15121 atactttgtg ccgattaccg atctgtgggg cggtcagctg agctacatcg gcttcaccaa
    15181 cttcgactgg ggttccgatt taggggatga cagcggtaac gcaatcaacg gtattaagac
    15241 ccgtactaat aactc
//
LOCUS       DAJVTL010000106        15238 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.108, whole genome shotgun sequence.
ACCESSION   DAJVTL010000106 DAJVTL010000000
VERSION     DAJVTL010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15238
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.108"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1625)
                     /locus_tag="OQQ26_003176"
     CDS             complement(<1..1625)
                     /locus_tag="OQQ26_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HCS1858540.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLPLPKAELVI
                     YFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALAN
                     AARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEE
                     LAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQ
                     LLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGRD"
     gene            complement(1845..5528)
                     /gene="metH"
                     /locus_tag="OQQ26_003177"
                     /pseudo
     CDS             complement(1845..5528)
                     /gene="metH"
                     /locus_tag="OQQ26_003177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312964.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
     gene            5728..6552
                     /gene="iclR"
                     /locus_tag="OQQ26_003178"
     CDS             5728..6552
                     /gene="iclR"
                     /locus_tag="OQQ26_003178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418442.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate bypass operon transcriptional
                     repressor IclR"
                     /protein_id="HCS1858541.1"
                     /translation="MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSV
                     ALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLL
                     AIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASG
                     AGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHAL
                     GLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR"
     gene            6870..9057
                     /gene="espL4"
                     /locus_tag="OQQ26_003179"
                     /pseudo
     CDS             6870..9057
                     /gene="espL4"
                     /locus_tag="OQQ26_003179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418441.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector EspL4"
     gene            complement(9026..10762)
                     /gene="aceK"
                     /locus_tag="OQQ26_003180"
     CDS             complement(9026..10762)
                     /gene="aceK"
                     /locus_tag="OQQ26_003180"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HCS1858542.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     QAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFYPDHGWESLLMRVISDL
                     PLRLRWQNKSRDINYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSG
                     TLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILP
                     GKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRV
                     FKVIKDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMEL
                     LLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAA
                     ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASEPWYSV
                     SLGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRR
                     QRFSVRYGEMLF"
     gene            complement(10945..12249)
                     /gene="aceA"
                     /locus_tag="OQQ26_003181"
     CDS             complement(10945..12249)
                     /gene="aceA"
                     /locus_tag="OQQ26_003181"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HCS1858543.1"
                     /translation="MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECT
                     LAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLA
                     ASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEA
                     GFGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARL
                     AADVTGVPTLLVARTDADAADLITSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRG
                     LAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPSFNWQKNLEDKTIA
                     SFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKD
                     GYTFVSYQQEVGTGYFDKVTTIIQGGTSSVTALTGSTEESQF"
     gene            complement(12279..13880)
                     /gene="aceB"
                     /locus_tag="OQQ26_003182"
     CDS             complement(12279..13880)
                     /gene="aceB"
                     /locus_tag="OQQ26_003182"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HCS1858544.1"
                     /translation="MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQR
                     NKLLAARIQQQQDIDNGTLPDFISETASIRDADWKIRGIPADLEDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNS
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQS
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDEERNNQVLNKVKADKALEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEV
                     LREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHQKTLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAA
                     RLMEQITTSDELIDFLTLPGYRLLA"
     gene            complement(14149..15078)
                     /gene="metA"
                     /locus_tag="OQQ26_003183"
     CDS             complement(14149..15078)
                     /gene="metA"
                     /locus_tag="OQQ26_003183"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HCS1858545.1"
                     /translation="MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIEAENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDVQEQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAQTLAQEYFRDVEAGLDPEVPYNYFPHNDPQNKPRAS
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
BASE COUNT         3797 a         3962 c         3738 g         3741 t
ORIGIN      
        1 tcgtcccgtc cttcatcttc atccggctgt tccagcacac tgtaagccac cgaacaaaac
       61 agcgagttca gacgctgcat atctcccagt aagcctaaat gtagcgaact ggtttcaatg
      121 ctctgcacgt tttgctgatg caggcgatcg acgtgggcgt gggaatagcg gcgattaaga
      181 atgcgaaagc gatgcttgct gcggcgcaaa cgacgggcgc tggtaacatc cccagagaag
      241 aaaaccgaca ttgccagttt taaattactg agcaattgct catagagcgc atccagttcc
      301 ttcaagccat caagcgaaaa tgcccgccgt gctgccagcg atttatcggc aatttcgctc
      361 cccatgcgct cgacgatatc ggaggcctgt tcaaggttga gcgacatttc gatgatctcc
      421 gcccagcggc gcgactcttc ctccgccaac tcttcttttg gcatccgcgc cagatacagc
      481 ttaatggcgg tatagagaac gttgatatca tctgccagct tacgcagctc tttctcctgc
      541 cgtggctcgc cgtgcatcac tttattcagc ccttccatca tctgttccat ggcgtcgcca
      601 atgcgcaggg tttcgcgggc ggcgttcgcc agagcaagcg tgggcgtatc cagcgcgctg
      661 acatccagat gtttgggtcg tagctgggta tccagttccg gttcatcgcg aataatcgtt
      721 ttgcaaaacc gtgccatcgg gtcaacaaat ggcagcatga ccaggcaacg tacaaggttg
      781 tagaagacgt ggaaatagat caccagttcc gcttttggca atggcaactt ccccattgtc
      841 tctgccagca aatgaacaaa cggtagaata atcaggctac ccaccagctt aaacagcaga
      901 ctacccagcg cgacacggcg ggctgcggca ttggcggcac tgttgttgag catcgccagc
      961 agaccggaac cgaggttagc accaatcacc agacagagcg ccacggggaa ggagataatg
     1021 cctgcggcgg tcagagtcgc ggtcagcagt acagcagcaa ggctggagta gctgataatg
     1081 gcgaacatcg cgccaatcag cgcatccagc agaatatcgc cggtcagcga ggcaaagatt
     1141 acctgaacgc cgtttgcctg ggtgatcggc gttacggcct gcacaatcaa ctccagcgcc
     1201 agcaaaatca gcccaagacc aataccgacg cggcccagtt gcccggcgcg tgactgtttg
     1261 cgtccgagga aaaaaatcac gccgataaaa ataagtaacg gtgacagcca ggataagtcg
     1321 aaggtgagaa tacgcgccat tagcgccgtc ccgacatctg cccccagcac aatgaccaga
     1381 gccggtgcga gggctaccag atcctgagcg acaaacgagg tcaccagcat ggtggtggca
     1441 ttactgctct gcaccagtgc ggtaacgccg atccccgcgc aaaaggcgag cggctttttt
     1501 tcgacgctcc ggctaaggac agtacgcaaa cgcgcgccga agacgcgcat tacgccggtt
     1561 cgaacaatat gagtccccca gaccagcagg gcgacggcag aaagcaggtg aagcagcgtt
     1621 aacacgagtt caggttctcc ttatcgttat atgttcctga agcaattgaa tgaccaaagg
     1681 accggaaaca cgctgactgg catctttatt gtgccttttg acattcgttt ttccggctaa
     1741 gattattcca gcctgattcc agtataagtg tttcatatta ataaagagac agggcactca
     1801 ttgagcgccc tgtttgttgt aaggaaaagt gacagatttg tgaatcagtc cgcgtcatac
     1861 cccagattcg gtgccagcca gcgctcaaca tctgagacgc tcataccttt acggcgggca
     1921 tagtcttcaa cctggtcgcg ctgaatttgc gccaccgcgt aatacttgct gtccggatga
     1981 ctgaagtacc aacccgaaac cgatgcaccc ggccacatgg cgaaagattc cgtgagtttc
     2041 ataccggtat gtttttccac ttccagcagc tcccagatgg tggctttttc cgtatgttcc
     2101 gggcaggccg ggtagcccgg tgccggacgg atgccctagt agttttcgcg gatcagttct
     2161 tcgttgctga ggttctcgtt cggcgcatag ccccagtaga ctttacgcac acgctcatgg
     2221 agatactccg caaaggcttc ggctaaacgg tcggcaagcg ctttcaccat gattttgttg
     2281 taatcatcgt gctgcgcttc aaaggcatca gccagtgcgt cctcttccag cccgccagtc
     2341 acggcaaatg cgccgatgta atctgcttta ccagaaagct tcggcgcaac gaagtcagcg
     2401 agacagtagt tagcgaatcc cgttttttcg gtctgttgtc gtagatggtg gctgacgttg
     2461 atcacatggg tacgtgtttc gtcgcggtag atttcaatgt catcgcccac acggtttgcc
     2521 gggaacaggc ccaccacgcc acgcggattc agcgttttct cggcgcttaa tttatccaac
     2581 atgtcgttgg cgtctttaaa cagccgcttc gcctcttcgc ctaccacttc atcttccaga
     2641 atgcgcggat acttcccggc cagcgaccag gtcataaaga acggtgtcca gtcgatgtaa
     2701 ttacgcagcg tttcgatgct ggcttcgact tcctgcacgc cgagacggtg cgccaccggc
     2761 ggcgtgtaag cctgccagtc aaaagcgaaa tcgttatcgc gcgccgcttc cagcgtgacc
     2821 ggtggtgtgc gtggtttctt gcgcccgtgc tgaatacgca cggtttcgta ctccttgcgg
     2881 gtacgagcga caaaatcatc acgctgagta tcggaaagca gcgccgccac cacgccaacg
     2941 gtgcgcgagg cattctgcac atacaccgtc gggccgctgt aattctgctc aattttcacc
     3001 gccgtgtgcg cttttgaggt ggtcgcgccg ccaatcaata gcggaatggt gaagccctga
     3061 cgctccatct ctttcgccac gttaaccatc tcgtccagcg acggcgtgat aagccccgaa
     3121 aggccaatca aatcagcatt cacttcttta gcagtacgga gaattttttc cgcaggcacc
     3181 atcacgccga gatcgacaat ttcgtagttg ttacattgca gcaccacgcc aacgatattt
     3241 ttaccgatat cgtggacgtc gcccttcacg gtggcgatca ccatcttgcc gttggttttg
     3301 ccctgctctt tgctggcttc aataaacggt tcgagatacg ccaccgcctg tttcatgacg
     3361 cgcgccgatt tgaccacctg tggcaggaac attttccctt cgccaaacag atcgccgacc
     3421 acgttcatgc cgtccatcaa cgggccttca atcacttcaa tcgggcgcgt agcctgctgg
     3481 cgggcttctt cggtatcctg ctcgataaac tcagtaatgc ctttgaccag cgagtattcc
     3541 agacgtttat tcacttccca cgagcgccac ttcgcctgct gggcgttagc ggtgtcgtcg
     3601 gttttgctgc cgcgatattt ctcggcaagc tccagtaaac gctcagtgcc atcgtcgcga
     3661 cggttaagaa tcacatcttc caccgcgtcg cgcagttcag cgggcaggtc gtcgtaaatc
     3721 gccagttgcc cggcgttgac gatccccata tccatgccat tgcgaatagc gtagtagagg
     3781 aacactgcgt gaatggcttc gcgcaccgga tcgttgccac ggaacgagaa agaaacgtta
     3841 gatacgccac cggaaatcag cgcgtgcggc agttcgcgtt tgatgtcttc acacgcgccg
     3901 ataaagtcct gcgcgtagtt gttgtgctct tcaatgccgg tggcgaccgc gaagatgttc
     3961 gggtcgaaga tgatatcttc tggcgggaag ccaacctctt cggtgaggat tttgtacgcc
     4021 cgacggcaaa tctcgatttt ccgtgcgcga gtatcggcct gtccctgttc gtcaaaggcc
     4081 attaccacca ctgccgcacc atagcgacgc aacaatttcg cgtgatggat aaaggcatcg
     4141 acgccctctt tcatcgagat tgagttaaca atgcctttgc cctgaataca cttcagccct
     4201 ttttcgataa cgtcccattt tgaggagtcg atcataatcg gcacgcgagc gatatccggt
     4261 tcaccggcaa tcagattgag aaaacgcacc atcgccgctt cggcatcgag catcccttca
     4321 tccatgttga tatcgataat ctgcgcgccg ttttccacct gctgacgcgc cacatccagc
     4381 gcctcgctgt atttctcttc tttgatcagg cgcttgaact tagcagagcc ggtgacgttg
     4441 gtgcgttcac ccacgttcac aaacaggcta tcgtcgccaa tgttcagcgg ctccaggcca
     4501 gacaaacggc aggctacggg aatttccggc agtttgcgcg gcgctaatcc ttctactgca
     4561 cgactcatcg ctgcaatatg ttgcggcgtg gtgccgcagc aaccaccgac gatattgaga
     4621 aagcccgctt gcgcccattc acgtatctgt tttgccatcg tgtcggcgtc gagatcgtat
     4681 tcaccaaagg cgttaggcag cccggcgttc gggtgggcgg tgacgtagca ttccgcaatc
     4741 cgtgatagtt cctgcacgta ctggcgcagt tcatcgggcc ccagcgcaca gttcaggcca
     4801 aaggtcagcg cttcggcgtg gcgcaatgag ttgtaaaatg cttcggtggt ctgcccggag
     4861 agcgtgcgcc cggaggcgtc ggtgatggtg ccggagatca taatcggcag ctcaacgccc
     4921 agcgcttcaa actccgtttt caccgcaaag accgccgctt tggcgttaag ggtgtcgaaa
     4981 acggtttcaa tcaggatcag atccgcacca ccttccacca gcgctttggt ggactctcga
     5041 taagccgcca ccagcccgtc aaaggtgata ttacgaaatg ccggatcatt tacgtccgga
     5101 gaaatagacg ccgtgcggtt agtcgggccg agaacaccgg caacgtagcg cggtttctcc
     5161 ggcgtgcgcg cggtccactc atcagcacag gcgcgcgcca gtttcgccgc cgcaaagttg
     5221 atttccgccg acagggattc catctggtaa tccgccatcg caatggtcgt ggagttgaag
     5281 gtgttggttt cgatgatatc cgcgcccgct tcaaagtagg cgttgtggat agcggcgatc
     5341 acttccggtt tgctgagcac cagcaggtcg ttgttgcctt tgagatcgca tggccagtcg
     5401 gcaaagcgtt caccacgaaa atcggcttcg ttcagtcgat aactctggat catggtgccc
     5461 ataccgccgt ccagcaccag aatacgttca tttaactgcg cacgcagttg ttccactttg
     5521 ctgctcacac ttgctcccga cacgctcaac ccagatttaa taaaaattca acaaaccata
     5581 ctggcataaa cgcatctgtg gtaaaagcga ccaccacgca acatgagatt tgttcaacat
     5641 taactcatcg gatcagttca gcaactattg cattagctaa caataaaaat gaaaatgatt
     5701 tccacgatac agaaaaagga gacggtcatg gtcgcaccca ttcccgcgaa acgcggcaga
     5761 aaacccgccg ttgccaccgc accagcgact ggacaggttc agtctttaac gcgtggcctg
     5821 aaattactgg agtggattgc cgaatccaat ggcagtgtgg cactcacgga actggcgcaa
     5881 caagccgggt tacccaattc cacgacccac cgcctgctaa ccacgatgca acagcagggt
     5941 ttcgtgcgtc aggttggcga actgggacac tgggcaatcg gcgcacatgc ctttatggtc
     6001 ggcagcagct ttctccagag ccgtaatttg ttagcaattg ttcaccctat cctgcgcaat
     6061 ttaatggaag agtctggcga aacggtcaat atggcggtgc ttgatcaaag cgatcacgaa
     6121 gcgattatta tcgaccaggt acagtgtacg catctgatgc gaatgtccgc gcctatcggc
     6181 ggtaaattgc cgatgcacgc ttctggtgcg ggtaaagcct ttttagccca actgagcgaa
     6241 gaacaggtga cgaagctgct gcaccgcaaa gggttacatg cctataccca cgcaacgctg
     6301 gtgtctcctg tgcatttaaa agaagatctc gcccaaacgc gcaaacgggg ctattcattt
     6361 gacgatgagg aacatgcact ggggctacgt tgccttgcag cgtgtatttt cgatgagcac
     6421 cgtgaaccgt ttgccgcaat ttctatttcc ggaccgattt cacgtattac cgatgaccgc
     6481 gtgaccgagt ttggcgcaat ggtgattaaa gcggcgaagg aagtgacgct ggcgtacggt
     6541 ggaatgcgct gacttttttc tggcgggcag aggcaatatt ctgcccgtca tacctgagtg
     6601 gtaatagaat aatggtgtct gttaatcgca ttgacgccaa aataacttat tgtcatacac
     6661 ttcgcacact tttattaact cagcattatt tttaaacatc aaaccactta attattaaca
     6721 aaatcgcaag atctcattac gccgaaactt ttacggtttc attatgagat tgagcgattt
     6781 atgatatttc tttacttgta atcatattaa attttttcac tgttctgata gttaaaattc
     6841 aagacgtcaa taaacaatga gatatttaaa tgattactcg cattcctcgt agttctttct
     6901 ctgcaaatat taataataca gcccagacaa atgaacacca aaccctgagt gaattgtttt
     6961 ataaagaact cgaggacaaa ttttctggca aggagctggc gacgcctcta ttaaaaaact
     7021 tctcagagaa ctgtagacaa aatggtcgtc atatctttag caacaaggat tttgtcatta
     7081 aattttccac gtccgtctta caagctgata agaaagaaat tacgataatt aataaaaacg
     7141 aaaacacgac actcactcaa accattgctc caatatttga agaataccta atggaaattt
     7201 tacctcaacg ctcagacact cttgataaac aagaattaaa cctaaaatca gatagaaaag
     7261 aaaaagaatt cccaagaatt aaacttaatg gtcaatgtta ttttccgggg cgaccccaaa
     7321 accgtatagt atgccgacac attgctgcac aatatattaa tgatatttat cagaatgttg
     7381 attacaaacc ccatcaagat gattactctt cagctgaaaa atttctcact cacttcaaca
     7441 aaaaatgcaa aaaccagact ttggcgttga tttccagccg tcctgagggg cgttgtgttg
     7501 ctgcctgtgg tgatttcggg ctagttatga aggcatattt cgacaagatg gaatcaaatg
     7561 gcatcagtgt tatggcagcc atattattgg tggataacca tgctttgacg gcgcggctaa
     7621 gaataaagaa cacaactgaa ggatgtaccc attacgtggt ttcggtttat gatccaaatg
     7681 taactaacga taaaataaga atcatgatcg aaagtaaaga ggatattaaa cactattctc
     7741 tgatggattt tatgaatgtt gattatagcc tcctgaaatg gtcaaatgat catgttatta
     7801 accaatctgt tgcaataatt ccagcacttc cgaaagaaca gctattgatg ttaaaaggat
     7861 ctgtggatga aataacccct ccattatcac ctgcaacgat gaatttgcta atggcaattg
     7921 gtcagaatca ccaacttacg caactgatga ttcaactcca gaaaatgcca gaactacata
     7981 gaacagaaat gttgactgcc tataatagta ttaacctgcc aggtttatat ttggctataa
     8041 attatggtaa tgcggatatc gttgagacta ttttcaattc attgtcagaa acaggatatg
     8101 aagggttact ctcgaaaaaa aaatctcatg catattctgg aggcaaaaga taaaaatggt
     8161 ttttctggat tatttttagc gatatcacgt aaggataaag atgttgtaac ctcgattctg
     8221 aacgccttac ctaaactggc cgcaacacat catttagata atgaacaggt gtataaattc
     8281 ctgagtgcca aaaatagaac gtccagccat gttttatacc atgttatggc gaatggtgat
     8341 gccgacatgc tgaaaattgt tttgggcgca ttacctttgt taattcgcac atgtcatttg
     8401 actaaagaac aggtactcga tctcctgaag gcaaaggatt tttatggttg cccaggacta
     8461 tacctggcga tgcaaaatgg acatagcgat atcgtgaaag ttattcttga agcattgccc
     8521 agcctggccc aggaaattaa cattttagct tccgatattg tagatcttct gaccgctaaa
     8581 agtcttgcgc gcgacacggg tttgtttatg gccatgcagc gcggacatat gaacgttatt
     8641 aatactattt ttaacgcatt acccactctg tttaatacgt ttaaattcga taaaaaaaat
     8701 atgaagcccc tcctcctggc aaataattct aatgaatatc ccggtttgtt ttcagcgata
     8761 cagcataaac aacaaaatgt tgtagagacg gtttatcttg ctttatctga ccatgcacgc
     8821 ctgtttggat ttactgctga agatattatg gatttttggc aacacaaagc gccacaaaaa
     8881 tactctgcct ttgagttggc ttttgaattg ggtcaccggg ttactgctga attaatcctt
     8941 aatacattaa ataagatggc tgaaagcttt ggctttacgg ataaccctcg atacattgcg
     9001 gagaaaaatt atatggaagc tttactcaaa aaagcatctc cccataccgt acgctaaatc
     9061 tttgcctgcg ccgatacgca taaacatctt ccacatgtcc ttcacgaata cggttttgta
     9121 gcgcgcgcca gtaatcggcg cggaacaggt cggcgtgcat ctcttcaaac agaggaccaa
     9181 tacgcgggtc ggcgcatagc cagtggcgaa actcttccgg gaaaacatcg cccagcgaga
     9241 cgctgtacca cggttcgctg gcaagttcgt cctccgggta gcgcggcggc gggatgtcgc
     9301 ggaaattcac ttccgtcatg tagcaaattt catcgtaatc ataaaacacc acacgcccgt
     9361 gacgggtgac accgaagttt ttaaacagca tgtcgccagg gaaaatgtta gcagcggcaa
     9421 gctggcgaat agcgttaccg tattcttcaa tggcatcgcg caactgctga ccttccactt
     9481 gttccagcca gatattaagc ggcaccatcc gccgctcgat atagagatgg cgaattacaa
     9541 tctgctcacc aagatcggtg attttttccg ctgcttcctg gagcagtaat tccattaatg
     9601 ccggggaaat atgccgcttc tccagcacaa agttttcaaa ctcctgggtg tccgccattc
     9661 ggcccacacg gtcgtgctct ttcaccagtt gatagcaggc acgaacgtga gcggcagaca
     9721 tctctttctg cggcgcgaac ttgtctttga tgactttgaa tacccgatca aagcccggca
     9781 gcgtaaacac caacatcacc attccacgaa tacccggcgc ttcaatgaac tgctcattac
     9841 agccctgtag ataaacgaga tattcgcggt agctttcggt tttggcgtgc ttctggcagc
     9901 cgatagccat atacaattca gcagtggttt tacctggcag aatttcccgt agccactcga
     9961 ccagcgctgc gggcagcggt gcataaacca taaaataaga acgcgcaaag ccaaaaacaa
    10021 tgctcgcttc ggcggtcgtc gtcaggcagg tatcaataaa taactcgccg tcgtccgtct
    10081 ggtggatcgg cagtaagaag ggcaacgtgc cggaaggcgt gatcagtttg cccaccagcc
    10141 aggcggcttt attgcggtaa aacagttcgt tcgccacctg taaatgactt tccgcgaggt
    10201 tgtctgtccc cagcgtttcc gtcagatggc gaataatgta attgatatca cggcttttat
    10261 tctgccagcg caggcgcagc ggcaggtcgc tgataacgcg catcagtaga gattcccagc
    10321 cgtgatcggg gtaaaagtct ttcgccagcg ggcggggaat ggtacgaaag cggcgctctg
    10381 gctgggagct aaagataaaa agccgctcgg gagtaagcga gcggtggtca aataaccgac
    10441 agtacacgga gttaaaaaag ctctccgcaa tctcgaagcg cgggtaatcc ggcaacagcc
    10501 gcgtgtaatg ctctttaacg cgcagtaaaa atgccgcgtc cgtactttgg ccgttagtaa
    10561 tgcagcgcag ttgctccacg accagaccaa cgtgatgatc gtaaagatgg atacggtttt
    10621 tcatcgcctg ctggacagca tgccagtcgg cctgttcgaa gcgctgctgc gccccggaag
    10681 tcacttcgag gaatcgacca tactgagcgt cgaagccttg cagaatggtt tgtgcaatca
    10741 gtaattccag gccacgcggc atttgttgcc ctcatcagga gcagtgaatt gccggatgcg
    10801 gcgtgaacgc cttatccagc ctacgttcgg caacggttgt aggcatgata agacgcgcaa
    10861 gcgtcgcatc aggcatcatg cgttgattgc cggatgcgac gtgaacgcct tatccggcct
    10921 acagtcagca acggttgttg ttgcttagaa ctgcgattct tcggtggagc cagtcagcgc
    10981 ggtaaccgac gacgtaccgc cctgaataat ggtcgtcact ttatcgaagt aacctgtacc
    11041 cacttcctgc tggtaagata cgaaggtata gccatctttc gcggcggcaa attccggctg
    11101 ctgcactttc tcaacatagt gcttcatacc ttcgccctgc gcataagcgt ttgccaggtc
    11161 gaacatgtta aaccacatgc tgtggatacc tgccagggtg atgaactgga acttgtagcc
    11221 catatccgac agctgctgct ggaagctggc aatagttttg tcttcgaggt ttttctgcca
    11281 gttgaacgac ggcgagcagt tataagccag cagtttgccc ggatatttcg cgtggatagc
    11341 ttgtgcaaag cgacgcgcca gttccagatc cggcgtggag gtttcacacc ataccaggtc
    11401 agcatatggc gcatacgcca ggccacggct gatcgcttgc tcaatgcccg catgagtacg
    11461 gaagaagcct tcactggtac gctcgccggt aataaattcg ctgtcatacg ggtcgcaatc
    11521 tgaggtgatc agatccgccg catcagcatc ggtacgtgca accagcaggg ttggaacgcc
    11581 cgtcacgtca gctgccagac gcgccgcgac cagtttctga atagcttcct gagttggcac
    11641 taaaactttg ccgcccatgt gaccgcattt cttcactgac gccagctgat cttcgaagtg
    11701 aactgccgct gcaccggctt caatcatcgc tttcatcagt tcaaaggcat tcaggacacc
    11761 gccaaaaccg gcttccgcat cggcaacgat cggcaggaag taatcgacat agcgcggatc
    11821 gcccggctca atgcccgcgg accattggat ctgatcggca cgacggaagg tgttgttgat
    11881 ccgctccacc acagctggca ccgagtttgc cggatagagc gactgatccg gatacatgct
    11941 ggccgccagg ttagcgtccg ccgctacctg ccatcccgac agatagactg cttcaatacc
    12001 cgctttcgcc tgttgcagcg cctgaccgcc agtcagtgca ccgaggctgt tgatgtagcc
    12061 ttttttcgac tcaccgtgca gcagacgcca cattttcgct gcgcccagtt gcgccagcgt
    12121 gcattcagga ttgactgaac cgcgtaattt caccacatct tccgcactgt atgggcgagt
    12181 aatgccttcc caacgcggtt gagtccactc tttctgtaat tcttcaattt gttgtgtacg
    12241 ggttttcatg tgcagatgct ccatagttat gtggtggttt acgctaacag gcggtagcct
    12301 ggcagagtca ggaaatcaat taactcatcg gaagtggtga tctgttccat caagcgtgcg
    12361 gcatcgtcaa aacggccctg ggagaaacgt tcttcgccca gttcgctggc aatgactttc
    12421 atctcttcgc ccagcatctg gcggaacaag gctttggtca ccggtttgcc attgctcaac
    12481 gttttttgat gatggatcca ctgccagatc gaggtacggg aaatttcagc cgtcgccgca
    12541 tcttccatca ggccataaat cggcacgcag ccgttgccgg agatccacgc ttcgatgtac
    12601 tgcacagcca cgcgaatgtt ggcgcgcata ccttcttcgg tgcgttcacc atcacaaggt
    12661 gccagcagct gatcggcagt aatcggcgcg tcttgttcgc gcaatacttc aagctgattt
    12721 ttacgggagc cgagaatgtc gttgaatacc gccattgccg tgtctgcaag gcctgggtga
    12781 gcgatccatg tgccatcgtg accgttattg gcttccagcg ctttatccgc ttttactttg
    12841 ttgagcacct ggttattacg ctcttcatct ttgctcggaa taaacgctgc catgccgccc
    12901 atcgcaaaag caccgcgttt atggcaggtt ttaatcagca ggcgtgagta agcattcagg
    12961 aatggtttat ccatcgtcac ggcctgtctg tctggcagga cacgatcggg atagtttttc
    13021 aacgttttga tatagctgaa gatgtaatcc cagcgaccgc agttcagacc aacaatatgg
    13081 tcgcgcagcg cgtgaaggat ttcgtccatc tggaacacgg cgggcagcgt ttcaatcagc
    13141 aacgtcgcct tgatggtgcc gcgcggcaga ttaaagcgat cttctgcata gctgaagact
    13201 tcgctccacc aggccgcttc ctgccatgac tgggttttcg gcagatagaa atagggacca
    13261 ctgccctttg ccaacagtgc ctgatagttg tggaaaaaat agagcgcaaa atcaaacagg
    13321 ctgccgggga ttgcctcacc acgccaggtg acatgttttt ccggcaagtg cagaccgcgt
    13381 acccgacaaa tcaaaaccgc tgaattgggc ttgagctggt aaattttgcc tgcttcattg
    13441 gtgtaactga tggtgccgtt aaccgcatca cgcaggttaa tttgcccgtc gatcactttg
    13501 ttccagtctg gtgccagtga atcttcgaaa tcggccataa agactttcac attggcgttc
    13561 agtgcgttga tcaccatctt gcgctctacc gggccagtta tctctacgcg gcggtcttct
    13621 aagtccgcag gaatcccgcg aattttccaa tcagcatcgc gaatggaagc tgtttccgaa
    13681 ataaaatcag gcaacgttcc gttatcaata tcttgctgct gctgaatgcg cgctgccaga
    13741 agtttattgc gttgtggcgt aaaatgcgtc accagctcag tcagaaattc taccgcttcg
    13801 gcagtaagaa tttgcttctc ctgctcgcca tacggccttg tgaaagccag ttcatcggtt
    13861 gttgttgcct gttcagtcat cgtgcagctc ctcgtcatgg atccgaaaac ttcccctctg
    13921 tgaacgaagg atcgttgtgc gcttttcgtt cagcacaact aagactactc atttaaaatg
    13981 caaaatcaaa aacaatttcc attttaatta aaaatacttt ataacttatt aataacaata
    14041 tgaataaaat ttattcacct gatgaggtgc gtttcggaaa taaaaaaggc acccgaaggt
    14101 gcctgaggta aggtgctgaa tcgcttaacg atcgactatc acagaagatt aatccagcgt
    14161 tggattcatg tgccgtagat cgtatggcgt gatctggtag acgtaatagt tgagccagtt
    14221 ggtaaacagc aaattaccgt gactacgcca gctcgctcgc ggtttgtttt gcggatcatt
    14281 gtgcgggaaa tagttatacg gtacttccgg gtctagtccg gcttccacat cgcggaaata
    14341 ttcctgcgcc agcgtttgcg catcatattc gggatggccc gtcacaaagg caattcgctt
    14401 atctttgctg gcaaacagat atgcatcccc ttcttccgtc tctgccagaa tttccagatc
    14461 ggtgtaatca cgaatcaacg ctgccggaaa gtcagcatag cgagaatgcg gtgccaggaa
    14521 tgaatcatca aagccacgcg tcagaagcgc atgaggatgg agaatatgat gctcgtaaac
    14581 accagagagt ttgtcggtgc gggtttgctt aggaatgccg tagaggatat tgagcgcggc
    14641 ctgtaccgcc cagcagacaa acagcgtcga ggtgacgtga tctttcgacc actccagcac
    14701 ctgtttgatc tgcggccagt aagcgacatc attaaactcc accaggccca gcggcgcgcc
    14761 ggtaactatc agaccgtcaa agttctgttc ctgaacatct tcaaagttac agtagaagtt
    14821 gttcagatgc tctgcgggcg tgttgcgcga ttcacgggaa tcgatgcgca acagctgaat
    14881 atcgacctgc aaaggtgagt ttgaaagcag gcgcagaaac tgattttcag cttcaatctt
    14941 cttcggcatc aggttaagga tcagaacctt aagtggacga atttcctgac cagacgcacg
    15001 agaagttgtc atcacaaaga cgttttcttc acgcaagaaa ttgacggcgg gtagctcgtc
    15061 cggcacacga atcggcataa cctgattacc tcactacata cgcttatacg tttagacatc
    15121 cagatagctg aagataacca gaaaatttgc caatgtcgag cctgcatgtt gaaggtgaga
    15181 aagtttcaag gaaaaggcta cgttagaata taagaatgac gaaaaggaga gaaaatgg
//
LOCUS       DAJVTL010000107        15225 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.109, whole genome shotgun sequence.
ACCESSION   DAJVTL010000107 DAJVTL010000000
VERSION     DAJVTL010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15225
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.109"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            451..1164
                     /gene="aphA"
                     /locus_tag="OQQ26_003184"
     CDS             451..1164
                     /gene="aphA"
                     /locus_tag="OQQ26_003184"
                     /EC_number="3.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HCS1858546.1"
                     /translation="MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQA
                     PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT
                     NMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY
                     KPLPQAGAFGEEVIVNSEY"
     gene            1275..1691
                     /locus_tag="OQQ26_003185"
     CDS             1275..1691
                     /locus_tag="OQQ26_003185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HCS1858547.1"
                     /translation="MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQH
                     TSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVL
                     PVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE"
     gene            1695..2051
                     /locus_tag="OQQ26_003186"
     CDS             1695..2051
                     /locus_tag="OQQ26_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HCS1858548.1"
                     /translation="MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVEN
                     RPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQ
                     AVNLLPEEKRKLLVQL"
     gene            complement(2086..4908)
                     /gene="uvrA"
                     /locus_tag="OQQ26_003187"
     CDS             complement(2086..4908)
                     /gene="uvrA"
                     /locus_tag="OQQ26_003187"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HCS1858549.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA
                     ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA
                     PWGSLSANVHKVVLYGSGKENIQFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG
                     QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC
                     EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
                     FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
                     DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
                     ILVSGTPETVAECEASHTARFLKPML"
     gene            5162..5698
                     /gene="ssb1"
                     /locus_tag="OQQ26_003188"
     CDS             5162..5698
                     /gene="ssb1"
                     /locus_tag="OQQ26_003188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HCS1858550.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDK
                     ATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEV
                     VVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
                     PAAPSNEPPMDFDDDIPF"
     gene            complement(5797..6078)
                     /locus_tag="OQQ26_003189"
     CDS             complement(5797..6078)
                     /locus_tag="OQQ26_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjcB family protein"
                     /protein_id="HCS1858551.1"
                     /translation="MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISS
                     GLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT"
     gene            6508..8094
                     /gene="pdeC"
                     /locus_tag="OQQ26_003190"
                     /pseudo
     CDS             6508..8094
                     /gene="pdeC"
                     /locus_tag="OQQ26_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418485.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
     gene            complement(8097..8420)
                     /gene="soxS"
                     /locus_tag="OQQ26_003191"
     CDS             complement(8097..8420)
                     /gene="soxS"
                     /locus_tag="OQQ26_003191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HCS1858552.1"
                     /translation="MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD
                     YRHRL"
     gene            8506..8970
                     /gene="soxR"
                     /locus_tag="OQQ26_003192"
     CDS             8506..8970
                     /gene="soxR"
                     /locus_tag="OQQ26_003192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HCS1858553.1"
                     /translation="MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN"
     gene            9502..10851
                     /gene="ghxP"
                     /locus_tag="OQQ26_003193"
                     /gene_synonym="yjcD"
     CDS             9502..10851
                     /gene="ghxP"
                     /locus_tag="OQQ26_003193"
                     /gene_synonym="yjcD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine/hypoxanthine transporter GhxP"
                     /protein_id="HCS1858554.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGL
                     IFDPNVHFSGVFAMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI"
     gene            11003..12652
                     /locus_tag="OQQ26_003194"
     CDS             11003..12652
                     /locus_tag="OQQ26_003194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HCS1858555.1"
                     /translation="MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGF
                     LIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGW
                     LWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFP
                     ARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ"
     gene            complement(12806..14098)
                     /locus_tag="OQQ26_003195"
     CDS             complement(12806..14098)
                     /locus_tag="OQQ26_003195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HCS1858556.1"
                     /translation="MRYNGLNNMFFSLCQINDNHSFTSSSHTKKTKSYNYSKHHKNTL
                     IDNKALSLFKMDDHEKVIGLIQKMKRIYDSLPSGKITKETDRKIHKHFIDIALYANNK
                     CDDRITRRVYLSKEKEVSIKVVYFINNVAVHNNTIEIPQTVNGGYDFSHLSLKGIVIK
                     DEDLSNSNFAGCRLQNTIFQDCNMYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGT
                     LNACSAMHVQFYNAAMNRANIKNTFLDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSF
                     SKLDLINFEHADLSRVNLNKAILQNINLIDSKLFCTWLTNTFLEMVICTDSNMANVNF
                     NNANLSNCHFNCSILTKACMFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVT
                     LQKFFEEDCTSHTGMSQTEDNINAVAMKITADIMQHAD"
     gene            complement(14276..>15225)
                     /gene="actP"
                     /locus_tag="OQQ26_003196"
     CDS             complement(14276..>15225)
                     /gene="actP"
                     /locus_tag="OQQ26_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HCS1858557.1"
                     /translation="NNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTAGL
                     PHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAGHL
                     IGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVFKK
                     GATEREELRVSKITVLILGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLSMY
                     WSKLTTRGAMMGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSITVAFLG
                     IWFFSATDNSTEGARERELFRAQFIRSQTGFGVEQGRAH"
BASE COUNT         3682 a         3656 c         3881 g         4006 t
ORIGIN      
        1 caacaggtaa agatgtcgtt ttgttgctat tcacatatga tatattcata tcatcatctc
       61 catcgggagt aataaaatta gtcaccattg taggataggg ttctggtcaa tcaggaatca
      121 tctttataaa cttcgattgt ttttgtaatg ctgtatcatt aagttcatta aatcgtacag
      181 cagataaatg ttctatcaaa tttcgctcat ttgcagagga ttcatcataa taaacgtaaa
      241 attaatgtat ccttacatcg agtaataaac attttttata caaaaaaaga caggaacgta
      301 tttactgggt taaatataat catcctgctt ttcatcacaa aaaccgcaga taatccttcc
      361 tttcccctgc agctggcgtt atggtcagat ggtttttgca acaaatctca caataaaaag
      421 tttcaacata ctgactattt agggaaaaat atgcgcaaga tcacacaggc aatcagtgcc
      481 gtttgcttat tgttcgctct aaacagttcc gctgttgccc tggcctcatc tccttcaccg
      541 cttaaccctg ggactaacgt tgccaggctt gctgaacagg caccaattca ttgggtttcg
      601 gtcgcacaaa ttgaaaatag cctcgcaggg cgtccgccaa tggcggtggg gtttgatatc
      661 gatgacacgg tacttttttc cagtccgggg ttctggcgcg gcaaaaaaac cttctcgcca
      721 gaaagcgaag attatctgaa aaatcctgtg ttctgggaaa aaatgaataa tggctgggat
      781 gaattcagca ttccaaaaga ggtcgctcgc cagctgattg atatgcatgt acgccgcggt
      841 gacgcgatct tctttgtgac tggtcgtagc ccgacgaaaa cagaaacggt ttcaaaaacg
      901 ctggcggata attttcatat tcctgccacc aacatgaatc cggtaatctt tgcgggcgat
      961 aaaccagggc aaaatacaaa atcgcaatgg ctgcaggata aaaatatccg aattttttat
     1021 ggcgattccg ataacgatat taccgccgca cgcgatgtcg gcgctcgtgg tatccgcatt
     1081 ctgcgcgcct ccaactctac ctacaaaccc ttgccacaag cgggtgcgtt tggtgaagag
     1141 gtgatcgtca attcagaata ctgacagagc gggagagcgt gatgctctcc cgaatgctgt
     1201 ttttttaatc acacctttat cctttcgctg tcttgctgca aactgattaa gagagtttta
     1261 tcaaggagca gcacatgtgg tatcaaaaga cgctcacgct tagcgccaaa tctcgtgggt
     1321 ttcatctggt aacggatgaa attctgaatc agctggctga tatgccgcgc gttaacatcg
     1381 gcttactgca tctgttgctg caacatacct ccgcctctct gacacttaat gagaactgcg
     1441 atcccaccgt acgccacgac atggagcgtt ttttcctccg caccgttccc gacaacggaa
     1501 attatgagca tgactatgag ggagcagacg atatgccttc tcatatcaaa tcctcaatgc
     1561 tgggaacatc gcttgtattg ccggtacata aagggcgtat tcagaccggc acctggcaag
     1621 gcatctggct gggcgaacat cgcatccacg gcggatcgcg tcgcatcatc gcgacactac
     1681 aaggggagta aaaaatgacc atttcggagt tgctacaata ttgcatggca aaaccaggcg
     1741 cagaacagag cgtgcataac gactggaaag cgacgcagat caaagtggaa gatgtactgt
     1801 ttgcgatggt gaaagaagta gaaaatcgcc cagctgtttc gctgaaaacc agcccggagc
     1861 tggcggagct gctacgtcag cagcacagcg atgtgcgtcc tagccgccat ctgaataaag
     1921 cgcactggag caccgtgtat ctcgacggtt cgctgccgga ttcgcaaatc tattatctgg
     1981 tggatgcgtc ttatcagcag gcagtgaatt tactaccgga agaaaagcgt aaattgctgg
     2041 tacaactctg aaaggaaaag gccgctcaga aagcggcctt aacgattaca gcatcggctt
     2101 gaggaagcgt gccgtatgcg aagcttcgca ctccgcgacg gtttctggcg taccggagac
     2161 gaggatttcg ccgccgccac tgccgccttc tggtcccagg tcgacaatcc agtcagcggt
     2221 tttgatcacg tcgagattgt gctcaatcac cacaatggta ttgccctgat cgcgcagttt
     2281 atgcagcacg tcgaggagtt gctgaatatc ggcgaagtgc agaccggtgg tcggctcgtc
     2341 gagaatatac agcgtctgcc cggtgccgcg ttttgacagc tcacgcgcca gcttcacgcg
     2401 ctgggcttca ccaccagaaa gtgtggttgc ggactgcccc aggcgaatgt acgtcagacc
     2461 aacgtccatc aatgtttgca gcttacgcgc cagagctggc accgcatcaa agaactcacg
     2521 cgcctcttcg atggtcatat ccagcacttc gtggatggtt ttgcctttgt acttaatttc
     2581 cagcgtttca cggttatagc gtttaccttt gcactgatcg cacggcacgt agatatccgg
     2641 caggaagtgc atctccactt tgatcacacc gtcgccctga caggcttcgc agcgcccgcc
     2701 acggacgtta aagctgaaac gtcctggcgt ataaccacgc gcacgggatt ccggtacgcc
     2761 cgcaaacagt tcgcgcacag gcgtaaacac gccggtatag gtcgccgggt tagaacgtgg
     2821 agtacgacca attgggcttt ggtcgatatc gatcacttta tcgaaatgct ccagtccctg
     2881 aatatcgcga tacggtgccg gttcggcgat ggtcgcacca ttcaactggc gttgggcaat
     2941 cgggaacagt gtgtcgttaa tcagcgtcga tttaccggaa cctgaaaccc ctgtgatgca
     3001 ggtaaacaga ccgactggca gcgtgagcgt cacgtccttc aggttgttgc cgcgtgcgcc
     3061 tgtcagcttc agcacttttt ctggattcgc cggaacgcgt ttcttcggca cttcaatctt
     3121 gcgtttaccg ctcatgtact gcccggtcaa cgattcaggc accgccataa tcgcttccag
     3181 cggaccttct gcgaccactt caccgccgtg aacacccgca ccaggaccga tatcgatcac
     3241 atggtcagcg gcgcgaattg cgtcttcgtc atgctccacc acaatcacgg tattaccgag
     3301 atcgcgcaga tggataagcg tacccaacag gcgctcgtta tcgcgctggt gcaggccgat
     3361 agacggctcg tccagcacgt acataacgcc aaccaggccc gcaccaatct ggctcgccag
     3421 acggatacgc tgggcttcac cgccggaaag tgtttctgcc gagcgggaaa gtgtcaggta
     3481 attcaggccg acgttaacga ggaatttcag acgatcgccg atctctttaa ggattttttc
     3541 tgcaatcttc gcccgctgac ctgcgagttt gagattgttg aagaattcca tcgcatgacc
     3601 gatgctcatg tcggagatag caggcagcgg cgtattctcg acatacacgt ggcgcgcttc
     3661 ccgacgcaga cgcgttcctt cgcagctggc gcatgggcga ttgctgataa acttggctaa
     3721 ttcttcacgt accgcactgg attccgtctc tttataacgg cgctccatat tgtgcagcac
     3781 gccttcgaac ggatgacgac gaatggaggt atcgccacga tcgttcatgt atttgaattg
     3841 aatgttttct ttgccagaac cgtacaacac cactttatgc acgttcgcgc tcaggctgcc
     3901 ccacggcgct tcgacgtcga acttatagtg atctgccagc gatttcagca tctggaaata
     3961 atagaagttg cggcgatccc agccacggat cgcaccgcca gccagtgaca gctcggggtt
     4021 ttggatcacg cggtcaggat cgaaatattg ctgtacgcca aggccgtcac aggtcgggca
     4081 ggcacctgcc gggttgttaa acgaaaacag tcgcggctcc agttcacgca tactgtagcc
     4141 gcaaattggg caggcgaagt tggcggagaa cagcagctct tccgctttcg ggtcgtccat
     4201 atccgccact acagcggtac caccggaaag ctccagcgcg gtttcaaacg actccgcaag
     4261 acgttgggta agatcgtcac gcaccttgaa gcgatcaacc accacttcaa tagtgtgttt
     4321 cttttgcagt tccagtttcg gcggatcgga aagatcgcag acttcgccat caatacgagc
     4381 acggatgtaa ccctggcttg ccaggttctc cagcgttttg gtgtgttcgc ctttgcgctc
     4441 tttaatgatt ggcgcgagca gcatcagacg cttgccttcc ggctgcgaca gcacgttatc
     4501 caccatctgg ctgacggttt gcgccgccag cgggacgtcg tggtccggac agcgcggttc
     4561 gccgacgcgg gcgaacaaca aacgcaaata gtcgtggatt tcggtgattg tccccaccgt
     4621 agaacgcggg ttatgagacg tcgatttctg ctcaattgag atggcaggag aaagcccctc
     4681 aatatgatcg acgtccggct tttccatcag tgacagaaac tgccgcgcgt aggcggaaag
     4741 ggattcaacg taacggcgct gcccttcggc atataaggtg tcgaaagcga gcgaggattt
     4801 gccagaaccc gaaagcccgg tcacgacaat gagcttgtcg cgggggataa cgaggttgat
     4861 gtttttgaga ttatgggtgc gggcgccccg aacttcgatc ttatccattc acctttcccg
     4921 gattaaacgc ttttttgccc ggtggcatgg tgctaccggc gatcacaaac ggttaattat
     4981 gacacaaatt gacctgaatg aatatacagt attggaatgc attacccgga gtgttgtgta
     5041 acaatgtctg gccaggtttg tttcccggaa ccgaggtcac aacatagtaa aagcgctatt
     5101 ggtaatggta caatcgcgcg tttacactta ttcagaacga tttttttcag gagacacgaa
     5161 catggccagc agaggcgtaa acaaggttat tctcgttggt aatctgggtc aggacccgga
     5221 agtacgctac atgccaaatg gtggcgcagt tgccaacatt acgctggcta cttccgaatc
     5281 ctggcgtgat aaagcgaccg gcgagatgaa agagcagact gaatggcacc gcgttgtgct
     5341 gttcggcaaa ctggcagaag tggccagcga atatctgcgt aaaggttctc aggtttatat
     5401 cgaaggtcag ctgcgtaccc gcaaatggac cgatcaatcc ggccaggatc gctacaccac
     5461 agaagtcgtg gtgaacgttg gcggcaccat gcagatgctg ggtggtcgtc agggtggtgg
     5521 cgctccggca ggtggtaata tcggtggtgg tcagccgcag ggcggttggg gtcagcctca
     5581 gcagccgcag ggtggcaatc agttcagcgg cggcgcgcag tctcgcccgc agcagtccgc
     5641 tccggcagcg ccgtctaacg agccgccgat ggactttgat gatgacattc cgttctgatt
     5701 tgtcattaaa acaataggtt atattgtttt aaggtggatg attaaagcat ctgccagcca
     5761 taaaaaagaa gcctccgtta tggaggcttc tacgtatcag gtcaaaatca ttggccattg
     5821 tggcggtgtc tgattcatct cttctatcat caccgactcg atgttgtgcc agatagcggt
     5881 gatgtccgcc attgtgatgc caagcaaccc cattgcgaac caacaggcgg aaacaacgcc
     5941 cagaccgctg ctgatcaccg caagcccgac ataatcagac cgacgaaaac ggatgttgag
     6001 tgtgctggcc agaaacatca ttacggcact aagaagttgc cagcgaagaa gaaccacgcc
     6061 agtggtgagg gtagccatca aacaattcct ctgaaaagag ccgatgccct ggacagcgcg
     6121 gcgttgttca cgggaggcgt ggtacactct ggctatcgcg gggcttgcag aacacaaaaa
     6181 tgaaacactc tgtttgtttc attaattttg tgaactatat cacaactgat tgtttgttag
     6241 ccatattagg ccgtgacttt tattgctgta cagattatgt ggtttttcag tggcattaag
     6301 ggcatatctt cccgccgcct ctgcattcct gtaggaaatt aattttgaat atcaatgaat
     6361 tattttcatc caggtgacga ttagaaaggt atcaatttca aatcaggcaa aagtgctatt
     6421 tataccgtaa gatttatcta aagacgtcgg tacccagggt tttcaccttg caatggccgg
     6481 gtataaacag gcaggaaatt gatagcaatg agtcatcgtg cacgacacca attactggcg
     6541 ttgccgggca ttatcttttt agttctcttt cccatcattc tttcgctatg gattgccttc
     6601 ctttgggcaa aatcagaagt gaataatcag ctccgaacct ttgctcaact ggcactggat
     6661 aaatccgagc tggtcattcg ctaggcagat ttagtgagcg atgcagctga acgctatcag
     6721 gggcaagttt gcactccagc ccatcaaaag cgaatgttga atattattcg tggctatctt
     6781 tatattaatg aattgatcta tgcccgtgat aactattttt tatgctcatc gctgatagcg
     6841 cctgtaaacg gctatacgat tgcaccggcc gattataagc gtgaacctaa cgtttctatc
     6901 tattattacc gcgatacgcc ttttttctct ggctataaaa tgacctatat gcagcgggga
     6961 aattatgtgg cggttatcaa ccctctcttc tggagtgaag tgatgtctga tgacccgaca
     7021 ttgcaatggg gtgtgtatga tacggtgacg aaaacctttt tctcgttaag caaagaggcc
     7081 tcggcagcaa cgttttctcc gctgattcat ttgaaggatt taaccgtaca aagaaatggc
     7141 tatttatatg cgacagttta ttcgacaaaa cgcccaattg cagccattgt tgcgacttca
     7201 tatcaacgtc ttataaccca tttttataat catcttattt ttgcgttgcc cgccggtatt
     7261 ttggggagtc ttgttctgct attactctgg ctacgtattc gacaaaacta tttatctccc
     7321 aaacgtaaat tgcaacgcgc cctcgaaaaa catcaacttt gtctttatta ccagccaata
     7381 atcgatatca aaacagaaaa atgtatcggc gctgaagcgt tgttacgttg gcttggtgag
     7441 caggggcaaa taatgaatcc ggcagagttt attccgctgg cagaaaagga ggggatgata
     7501 gaacagataa ctgattatgt tattgataat gtcttccgcg atctgggcgc gtacctggca
     7561 acacatgccg atcgctatgt ttctattaac ctgtcggcct ccgattttca tacgtcacgg
     7621 ttgatagcgc gaatcaatca gaaaacagag aaatacgcgg tgcgtccgca gcaaattaaa
     7681 tttgaagtga ctgagcatgc atttcttgat gtcgaaaaaa tgacgccgat tattctggct
     7741 ttccgccagg ctggttacga agtggcaatt gatgattttg gtattggcta ctctaacttg
     7801 cataacctta aatcattgaa tgtcgatatt ttgaaaatcg ataaatcgtt tgttgaaacg
     7861 ctgaccaccc acaaaaccag tcatttgatt gcggaacaca tcatcgagct ggcgcacagc
     7921 ctggggttaa aaacgatcgc tgaaggcgtc gaaactgagg agcaggttaa ctggctgcgc
     7981 aaacgcggcg tgcgctattg ccagggatgg ttctttgcga aggcgatgcc gccgcaggtg
     8041 tttatgcaat ggatggagca attacccgcg cgggagttaa cgcgcgggca ataaaattac
     8101 aggcggtggc gataatcgct gggagtgcga tcaaactgcc gacggaaaac gcgggagaag
     8161 gtctgctgcg agacataacc caggtccatt gcgatatcaa aaatcggacg ctcggtggtg
     8221 cgcaactcaa cggcggccag taacaggcga cgttggcgaa tgtaatcgcc aagcgtctga
     8281 tgcgtcaccg tgcggaacat tcgttgcaag taccactttg aatagcctga tttttttgcg
     8341 actacatcaa tgttaagcgg ctggtcaata tgctcgtcaa tccatgcgat aagatcctga
     8401 ataattttct gatgggacat aaatctgcct cttttcagtg ttcagttcgt taattcatct
     8461 gttggggagt ataattcctc aagttaactt gaggtaaagc gatttatgga aaagaaatta
     8521 ccccgcatta aagcgctgct aacccccggc gaagtggcga aacgcagcgg tgtggcggta
     8581 tcggcgctgc atttctatga aagtaaaggg ttgattacca gtatccgtaa cagcggcaat
     8641 cagcggcgat ataaacgtga tgtgttgcga tatgttgcaa ttatcaaaat tgctcagcgt
     8701 attggcattc cgctggcgac cattggtgaa gcgtttggcg tgttgcccga agggcatacg
     8761 ttaagtgcga aagagtggaa acagctttcg tcccaatggc gagaagagtt ggatcggcgc
     8821 attcatacct tagtggcgct gcgtgacgaa ctggacggat gtattggttg tggctgcctt
     8881 tcgcgcagtg attgcccgtt gcgtaacccg ggcgaccgct taggagaaga aggtaccggc
     8941 gcacgcttgc tggaagatga acaaaactaa agcgccacaa gggcgcttta gtttgttttc
     9001 cggtctttgt ctttctctct atcccgctgg tacacaggag ggtttccccc gacgtcaaca
     9061 cacctcattc gagcacgtgg tggaggttcc ggttggtgtt gatgctttaa ttgtatgtca
     9121 ccggcatttc tttatacttt ttatccgcaa tatttttgtc atctcagacg attttttatc
     9181 gcaatcctga acggtatacg gctcgataac gctgcaatct tgcgcaccga cgataacgtt
     9241 tgcgcatcaa ttgcctggtt tttcatcgtc aagacaataa aagagaaaaa agcagcaaac
     9301 ttcggttgaa aaagccgcta tgatcgccgg ataatcgttt gcttttttta ccacccgttt
     9361 tgtatgcgcg gagctaaacg tttgcttttt tgcgacgcag caaattgtcg caaacctgga
     9421 gcaggaagat aacgtttcgc tggcagggga ttgtccgcca cgcatcttga cgaaaattaa
     9481 attctcaggg gatgttttct tatgtctacg ccatcagcgc gtaccggcgg ttcactcgac
     9541 gcctggttta aaatttcaca acgtggaagc actgtccgtc aggaagtggt tgccgggtta
     9601 acaacgtttc tggcgatggt ctactcggtc atcgtcgttc caggtatgtt gggtaaagca
     9661 ggcttcccgc ctgcggcagt tttcgttgca acctgtctgg ttgccggact cggttctatc
     9721 gtgatgggtc tgtgggctaa tctgccgttg gcgattggtt gcgccatctc cctgacggcg
     9781 tttaccgcat tcagcctggt gctggggcaa catattagcg tacctgtcgc gctgggtgcc
     9841 gtgttcctga tgggtgtgct gtttacggta atttctgcca cgggtatccg tagctggatt
     9901 ttgcgcaact tgccgcacgg tgtggcgcac ggcacgggga tcggtatcgg tctgttcctg
     9961 ctgctcattg ccgctaatgg tgtcggtctg gtgattaaaa acccgcttga tggtctgccc
    10021 gttgcgctgg gtgatttcgc gaccttcccg gtgattatgt cactggtagg tctggcggtg
    10081 atcatcggcc tggaaaaact gaaagtccct ggtggcattc tgctgaccat tatcggtatc
    10141 tcaattgtcg gtttgatctt cgatcctaac gtccatttct ccggcgtttt cgccatgcct
    10201 tcattgagcg atgaaaacgg caattcactg attggcagcc tggacattat gggcgcgctg
    10261 aatcctgtag tcctgccaag cgttctggcg ctggtgatga cggcagtatt tgatgccacc
    10321 ggaactatcc gtgccgtcgc cggccaggcg aacctgctgg ataaagatgg gcagatcatc
    10381 gacggtggga aagcactgac cactgactcc atgagcagcg ttttctctgg cctggtgggt
    10441 gctgctccgg cagcggtata catcgagtct gcggcgggta cggcggcggg cggtaaaacc
    10501 ggtttgacgg ctatcaccgt tggcgtgctg ttcctgctga ttctgttcct ctctccgctc
    10561 tcttacctcg ttccggggta tgcaacggct ccggcgctga tgtacgttgg cctgctgatg
    10621 ctgagcaacg tggcgaaaat cgactttgct gattttgttg atgcgatggc gggtctggtt
    10681 acggcggtat tcatcgtgct gacctgtaac atcgtaacag gcatcatgat cggcttcgcg
    10741 actctggtga ttggtcgtct ggtttccggc gaatggcgca agttgaacat cggtacggtc
    10801 gttatcgccg tggcgctggt gaccttctat gcgggtggct gggctatcta atctttcata
    10861 tgattctgaa aacgggtggc aatggctgcc cgtttttatt ttctccgcac attgtgtgag
    10921 cttttgcgat attctgaaaa aatgagaatt caggcataac gcctttctca gatcataaaa
    10981 aaacatcgca aacagggaac gcatggaaat cttcttcacc atactgataa tgaccctcgt
    11041 ggtctcgctg tccggggtgg tcactcgtgt catgcccttt cagatcccgc ttccgcttat
    11101 gcaaatcgcc atcggtgcgc tactggcgtg gccgacgttt ggtttgcatg tggagtttga
    11161 tcctgaactc tttttagtct tgtttatccc gccgttgctg ttcgctgatg gctggaaaac
    11221 gccgacccgt gaatttctcg aacatggtcg agagattttc ggcctcgcgc tggcgctggt
    11281 ggtggtcacc gtggtcggca ttggcttcct tatttactgg gtggtgccgg gcattccgct
    11341 gatccccgcc tttgcgctgg cggcggtact ttctccgacc gatgctgtgg cgctctccgg
    11401 gattgttggc gaagggcgca tcccgaaaaa aatcatgggc attttgcagg gcgaagcgtt
    11461 gatgaatgac gcttccggcc tggtgtcgtt gaagtttgcc gtggcagtgg cgatggggac
    11521 gatgatcttc accgtcggcg gtgcgacggt cgaatttatg aaagtagcca ttggcggtat
    11581 tcttgccggt tttgtggtga gctggctgta tggtcgctcg ctgcgattcc tcagccgctg
    11641 gggcggtgat gaacccgcga cgcagattgt tctgctgttc ttgctgccat tcgcttctta
    11701 tctgattgcc gaacatattg gcgtttccgg catcctcgct gcggttgccg ccgggatgac
    11761 catcacccgc tccggtgtga tgcgccgtgc gccgctggca atgcgcctgc gcgcaaacag
    11821 cacctgggcg atgctggaat ttgtctttaa cggcatggtg ttcctgctgt taggtctgca
    11881 actgccgggt attctggaga cgtcgctgat ggcggcagaa atcgacccta acgtcgaaat
    11941 ctggatgctg tttaccgata ttattctgat atatgcggcg ctgatgctgg tccgtttcgg
    12001 ctggctgtgg acgatgaaaa agttcagcaa ccgcttcctg aagaagaagc cgatggagtt
    12061 tggttcgtgg accacacgag aaatcctgat cgcgtctttc gctggggtgc gtggggcgat
    12121 cactctggcc ggtgtgctct caatcccgct gctcttgccg gatggtaacg tcttcccggc
    12181 gcgctatgag ctggtgttcc tggcggctgg cgtcattctc ttctcgctgt ttgtcggcgt
    12241 ggtgatgttg cctattctgc tacaacacat tgaagtcgcg gaccattcgc aacaattgaa
    12301 agaggaacgt attgcgcgag cggcaacggc agaagtggcg attgtggcga tccagaaaat
    12361 ggaggagcgt ctggcggcgg ataccgaaga gaatatcgat aaccagttgc ttacggaggt
    12421 cagttctcgc gtcattggta acctgcgtcg tcgcgccgat ggacgtaacg acgttgaaag
    12481 ttccgtgcag gaagagaacc ttgagcgtcg cttccgtctg gcggcattgc gttctgaacg
    12541 tgctgaactg taccacctgc gcgccacgcg ggagatcagc aacgaaacgc tgcaaaaatt
    12601 actgcacgat ctcgatttgc ttgaagcgtt gctaattgag gaaaatcagt aagccgaaag
    12661 cgacgtaacc aggcccgagg taatctgaaa aaggtgcaat cttttgcacc tttaacaggt
    12721 tagctcgggc taacattcat gattctaaaa caaataagtt atctctcttg taaagtcaat
    12781 tcattggctg ttcttcgact taacctcaat ctgcgtgttg cataatatct gcagtaatct
    12841 tcatagcgac tgcattaata ttatcctcag tttgtgacat gccagtatga gaggtacaat
    12901 cttcttcaaa gaatttctgt agtgttacca gggtatcact atcaatgggg atattttcct
    12961 ccccacggag aatggaaatg cccattccct ggacgctagc ctcatcgaaa ttaacccgat
    13021 agagacgggt attaaacata catgcttttg ttaaaataga acagttgaaa tggcagttgc
    13081 ttaaattggc attattaaaa ttaacattag ccatattaga gtcggtacat ataaccattt
    13141 cgaggaatgt atttgtcagc cacgtacaaa agagtttgct atcaattaag tttatattct
    13201 ggaggattgc tttgttcaga ttgacgcgag acagatcagc atgttcaaag ttaattaaat
    13261 cgagtttaga gaaactaagg tcggctttga ataaattaac atatggcgct attactttat
    13321 aaagatttac ctcagccatg tacgccatat aaaaatttga atagtcaagg aaggtatttt
    13381 taatattggc tctattcatt gctgcattgt agaattgaac atgcatagcg gagcatgcat
    13441 ttagagttcc gtcggccatt tttatctgag cgaaatttga gtcatcgaga atacaattat
    13501 caaaaagtat tttttccatt atggcgtaat aaaaattcgt tttatacata ttacagtcct
    13561 ggaaaatagt gttttgtagt ctgcaacctg caaaattcga attggataaa tcttcatctt
    13621 taatcacgat acctttcagg ctaaggtgtg aaaaatcgta accaccattt actgtctgtg
    13681 gaatttcgat agtattatta tggacggcga cattatttat aaaatatacc accttaatgg
    13741 atacttcctt ttctttacta aggtaaactc ttctcgtaat tctatcgtca catttattat
    13801 ttgcatataa agctatatct ataaaatgtt tatgtatttt cctgtccgtt tccttcgtga
    13861 tttttcctga tggtaaacta tcataaattc ttttcatttt ctgaatcaaa cctatcactt
    13921 tttcatgatc atccatcttg aaaagagaga gggctttatt gtcaattaac gtgtttttat
    13981 gatgtttgct gtaattatat gattttgttt tctttgtatg tgatgaactt gtgaaagagt
    14041 ggttatcgtt aatctggcaa agagagaaaa acatattatt taaaccatta tagcgcataa
    14101 aatatcctta taattaacaa gaaagaaaag gcatattctc tgcattatca ttttctacga
    14161 ctgtcaaaaa tcgctcattt tttaatgagt ttatttgttt aatattatgg gaaaaggtga
    14221 tgcatgctgg agaggaagag tattccccgg tcaggcgacc ggggaagggg agagattaat
    14281 gcgcgcggcc ttgctcaacg ccaaagccgg tctgggagcg gataaactgc gcacggaaca
    14341 gttcacgctc gcgcgcacct tccgttgagt tatcggttgc cgagaagaac cagatgccga
    14401 ggaatgccac ggtgatagag aacagcgccg ggtattcata cgggaagatg gctttttcgt
    14461 gaccgaggat ctgtacccaa atcgtcgggc cgaggatcat cagtaccaca gcggtaatta
    14521 gccccagcca gcctcccatc attgcgccac gcgtagtcag tttcgaccag tacatagaaa
    14581 gcagaatgat cgggaagtta cagctcgccg cgatggcaaa cgccagcccc accatgaagg
    14641 cgatgttctg attctcaaac agcacgccga ggataatcgc aatcacgccg aggatcagta
    14701 cggtgatttt tgatacccgc agctcttcac gttcggtcgc accttttttg aagacgttag
    14761 cgtacaggtc atgcgaaacc gcggatgcgc ccgccagcgt cagacccgca accaccgcga
    14821 ggatagtggc gaaagcaacc gctgaaataa aaccaaggaa caggttgccg cccactgcat
    14881 tcgccaggtg aacggccgcc atgttgttac caccaatcag atggcccgcc gcgtctttat
    14941 attccggatt tgcaccgacc agcatgatcg cgccaaagcc gataataaag gtcaggatat
    15001 agaagtagcc cataaacccg gtggcgtaga acacgctctt acgtgcttcg cgggcatcgc
    15061 tgaccgtaaa aaagcgcatc agaatgtgcg gcaagccagc cgtaccaaac atcaatccaa
    15121 gccccagcga cagcgcggag atcggatctt tcaccagccc gcccggtttc atgatgtcga
    15181 cacctttcgg gtgtaccgcc atcgcttcgc tgaacagatt attga
//
LOCUS       DAJVTL010000108        14979 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.110, whole genome shotgun sequence.
ACCESSION   DAJVTL010000108 DAJVTL010000000
VERSION     DAJVTL010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14979
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.110"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..300
                     /locus_tag="OQQ26_003197"
     CDS             <1..300
                     /locus_tag="OQQ26_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HCS1858558.1"
                     /translation="QNQQRREAARERIQSATPEQRQVFKEKVQQRPLNQQQRDNARQR
                     IQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSERGARRLER"
     gene            complement(369..1793)
                     /gene="lpdA"
                     /locus_tag="OQQ26_003198"
     CDS             complement(369..1793)
                     /gene="lpdA"
                     /locus_tag="OQQ26_003198"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HCS1858559.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNPKAKKK"
     gene            complement(2118..4010)
                     /gene="aceF"
                     /locus_tag="OQQ26_003199"
     CDS             complement(2118..4010)
                     /gene="aceF"
                     /locus_tag="OQQ26_003199"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HCS1858560.1"
                     /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE
                     VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
                     IFEVEGAAPAVAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR
                     RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV
                     DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK
                     RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV
                     PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN
                     APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD
                     IRRLVM"
     gene            complement(4025..6688)
                     /gene="aceE"
                     /locus_tag="OQQ26_003200"
     CDS             complement(4025..6688)
                     /gene="aceE"
                     /locus_tag="OQQ26_003200"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008814576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HCS1858561.1"
                     /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA
                     RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
                     EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
                     NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTI
                     KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
                     YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
     gene            complement(6849..7613)
                     /gene="pdhR"
                     /locus_tag="OQQ26_003201"
     CDS             complement(6849..7613)
                     /gene="pdhR"
                     /locus_tag="OQQ26_003201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HCS1858562.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
                     TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
     gene            8154..9527
                     /gene="aroP"
                     /locus_tag="OQQ26_003202"
     CDS             8154..9527
                     /gene="aroP"
                     /locus_tag="OQQ26_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter AroP"
                     /protein_id="HCS1858563.1"
                     /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
                     VIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
                     HELGDTLVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
                     NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
                     VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
                     AKAVKAH"
     gene            complement(9570..10439)
                     /gene="ampE"
                     /locus_tag="OQQ26_003203"
     CDS             complement(9570..10439)
                     /gene="ampE"
                     /locus_tag="OQQ26_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HCS1858564.1"
                     /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
                     GMTIIAMSVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
                     SHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPV
                     TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
                     PAWFASLGDFHTSQYQVLTRLAQFSLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVV
                     VVIALLTIYGALV"
     gene            complement(10436..10987)
                     /gene="ampD"
                     /locus_tag="OQQ26_003204"
     CDS             complement(10436..10987)
                     /gene="ampD"
                     /locus_tag="OQQ26_003204"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HCS1858565.1"
                     /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPD
                     RKTDPGPAFDWAQFRVLVSKETT"
     gene            11075..11968
                     /gene="nadC"
                     /locus_tag="OQQ26_003205"
     CDS             11075..11968
                     /gene="nadC"
                     /locus_tag="OQQ26_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HCS1858566.1"
                     /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
                     ITAKLLPGNSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
                     PLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYGELLEGTNTQLLDTRKTLPGLR
                     SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
                     LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
                     FISVGALTKHVQALDLSMRFR"
     gene            12171..12611
                     /gene="ppdD"
                     /locus_tag="OQQ26_003206"
     CDS             12171..12611
                     /gene="ppdD"
                     /locus_tag="OQQ26_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HCS1858567.1"
                     /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
                     TFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNG
                     LSVVMTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN"
     gene            12621..14006
                     /gene="gspE"
                     /locus_tag="OQQ26_003207"
     CDS             12621..14006
                     /gene="gspE"
                     /locus_tag="OQQ26_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="HCS1858568.1"
                     /translation="MNIPQLTALCLRYQGVLLDASEEVVHVAVVDAPSHELLDALHFA
                     TTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHI
                     EPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVEL
                     AGNAVSFRIATLPCRGGEKVVLRLLQQVSQALDVNTLGMQPLQLADFAHALQQPQGLV
                     LVTGPTGSGKTVTLYSALQTLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGV
                     LRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVA
                     RWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGF
                     YGRTALFEVLPITPVIRQLISANTDVESLKTHARQAGMRTLFENGCLAVEQGLTTFEE
                     LIRVLEMPHGE"
     gene            13996..14979
                     /gene="hofC"
                     /locus_tag="OQQ26_003208"
                     /pseudo
     CDS             13996..14979
                     /gene="hofC"
                     /locus_tag="OQQ26_003208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414648.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
BASE COUNT         3501 a         4043 c         3793 g         3642 t
ORIGIN      
        1 cagaaccagc agcgaagaga ggcagcgcgt gagcgtattc agtctgcaac tcccgaacag
       61 cgccaggtgt ttaaggaaaa agtacagcag cgcccactga accaacagca acgtgataac
      121 gcccgccagc gtatacaatc ggcatcacct gaacaacgtc aggtttttcg ggagaaagtt
      181 caggagagcc gcccacaacg tctaaacgac agtaaccata ctgtcaggct gaataacgag
      241 caacggtcag cagtacgcga acgtctctct gaacgtggag caagaagact ggaaaggtaa
      301 attgcagacg taaaaagcgg cgtggttagc cgctttttta attgccggat gttccggcaa
      361 acgaaaaatt acttcttctt cgctttcggg ttcggcaggt cggtaatgct accttcgaac
      421 acttctgccg ccaggcccac agactcgtgc agagtcgggt gcgcgtggat ggtcagtgcg
      481 atgtcttcag catcacaacc catttcgatt gccaggccga tttcacccag cagctcgccg
      541 ccgttagtac cgacaatcgc accaccgatc acacggtgag attctttgtc gaaaatcagc
      601 ttggtcatac cgtctgcgca gtcggaagcg atagcacgac cagaagcagc ccacgggaag
      661 gtggcggttt catagctgat gcctttctct ttcgcttctt tctcagtcag acctacccat
      721 gcaacttctg gttcggtata ggcgatggac gggataactt tcggatcgaa gtagtgtttc
      781 ttaccggcga taacttcagc ggcaacgtgg ccttcgtgaa cacctttgtg tgccagcatc
      841 ggctgaccga cgatatcgcc gatagcaaag atgtgcggta cgttggtacg cagctgtttg
      901 tcaacgcgga tgaaaccacg gtcgtcaact tccacgccag ctttgcctgc gtcgaggttt
      961 ttaccgttcg gcacacgacc aatcgctacc agcacggcgt cgtaacgctg cggttcagct
     1021 ggtgcttttt tgccttccat cgtcacataa ataccgtctt ctttcgcttc aacggcggta
     1081 actttggttt ccagcatcag gttgaatttc ttgctgatac gcttggtgaa gactttaacg
     1141 atgtctttgt cagctgccgg gataacctgg tcgaacattt caaccacgtc aatctgtgaa
     1201 cccagcgcgt ggtatacggt gcccatttcc agaccgatga taccgccacc cattaccagc
     1261 aggcgttctg gtacttcttt cagttccagc gcgtcagtgg agtcccagat acgcggatct
     1321 tcatgcggaa taaacggcag ttggatcggg cgagaacccg ctgcaatgat cgcattgtcg
     1381 aagttgatca cggttttgcc gttctcacct tcaacttcca gggtgttagc cccggtgaat
     1441 ttacccagac cgttgaccac tttgactttg cggcctttcg ccataccagc cagaccaccg
     1501 gtcagctgat tgatcacttt ctctttccag gtacgaatct tgtcaatatc ggttttcggt
     1561 tcgccgaaga cgataccgtg ttcagccagc gctttggctt cttcgataac ttttgctacg
     1621 tgcagcagtg ctttagaagg gatacagccg acgttcaggc aaacaccgcc aagggtgttg
     1681 taacgttcta cgattacggt ttccagacct aaatcagcgc aacggaaggc agcggagtaa
     1741 cctgcggggc ctgccccaag taccacgacc tgagttttga tttcagtact catcatgacc
     1801 tctatatatt tatctccggc ggtcataccc gtcgtctttc aggccgcagc ggcgttagct
     1861 tcacgccctc accccagtca cttacttatg taagctcctg gggattctgg cgcttgctac
     1921 cttgctgcac ccagaaatcc atagggtatg tgaagtaata ccctaaccac caccgggtcg
     1981 ttctatccgt cggtatttta caaaattgtt aacaattttt aaacaacaaa cggcaaccga
     2041 tttgtctatt cgctaataac ctcaatacat tcatgagatt accagaaaaa agccggccgt
     2101 tgggccggct cttttactta catcaccaga cggcgaatgt cagacagcgt gttgttaatg
     2161 atggtaatga aacgggcacc atcagcaccg tcgatcacgc ggtggtcgaa ggagagagaa
     2221 atcggcagca tcagacgcgg cacgaactct ttaccattcc acaccggctc catcgcggac
     2281 ttggaaacgc cgaggatagc cacttccggc gcgttcacaa tcggcgcgaa gtgggtagta
     2341 cccaggccgc cgatgctgga gatggtgaag caaccgccct gcatttcgcc cgcagtcagc
     2401 ttaccgtcac gcgctttctt agaaatagtc atcagctcgc gagacagctc gatgatgcct
     2461 ttcttgttga cgtctttgaa taccggaaca accagaccgt tcggggtatc caccgccaca
     2521 ccgatgttga tgtatttctt cagggtcaga cgctgaccgt cttccgacag cgaactgttg
     2581 aagcgaggca tctgctcaag agctgcagca acggctttca tgatgaagac aaccggggtg
     2641 atcttcacat ccagcttacg tttcgccgct tcttcgttct gctgtttacg gaacgcttcc
     2701 agctcggtga tatcggtttt gtcgaagtga gtaacatgcg ggatcatcac ccagttacgg
     2761 ctcaggttcg caccagaaat tttctggata cggcccagtt ccacttcttc gatttcacca
     2821 aacttgctga agtccacctt cggccacggc agcatgcctg ggataccgcc gccagtcgcc
     2881 gccggagctg cttctgcacg tttgatagct tctttcacgt aagcctgaac gtcttcgcgc
     2941 aggatacgac ctttacggcc agtgcccttc actttcgcca gattaacgcc aaactcgcgt
     3001 gccagacggc ggatcagcgg agtcgcgtga acgtaagcgt cgttttcagc aaattcagat
     3061 ttgccttccg ctttcgcagc cggtgctgct gccggggctt cagcttttgc tgccggagcc
     3121 ggcgctgccg cttcctgttt cgcaggagct accgcaggtg ctgcgccttc aacttcgaag
     3181 atcataatca gcgagccagt tttcacttta tcgccaacgt tgactttcag ttccttcacg
     3241 acgcctgcaa acggagccgg aacttccata gacgctttat cgccttctac ggtgatcagt
     3301 gactgttcag cggcaacttt gtcgcccact ttcaccatca cttcggtcac ttcaacttcg
     3361 tcaccgccga tatccggaac gttaacttct ttcacgccag ccgctggtgc aggggccgct
     3421 gccggagccg cttcctgttt agccgccgga gctgccgcgc cggcttcacc cgcgacttcg
     3481 aagaccataa tcagcgagcc ggtagacact ttgtcaccca cgttcacttt gatctctttc
     3541 acggtgccag caaacggagc cggaacttcc atagaagctt tatcgccttc tacggtgatc
     3601 agcgactgtt cagcttcaac tttatcgcca actttcacca ggatttcggt cacttcaact
     3661 tcgtcgctgc cgatatccgg aacgttaacg tcttttgccg ctgcagccgc tggtgctgct
     3721 gccggagctg cttctttctt ctcttctgcc tgagcaggtg cagcgtctgc tgcaccgtcg
     3781 gcggaatcga aaatcataat cagtgcgccg gtctgggttt tatcgccaac agagactttg
     3841 atctctttaa cgatacccgc ctgcggagac ggaacttcca tagaggcttt gtcgccttct
     3901 acggtgatca gcgactgttc ggcttcaact ttgtcgccca ctttgaccag gatctcggtg
     3961 atttcaactt catcagcccc gatgtccggt actttgattt cgatagccat tattctttta
     4021 cctcttacgc cagacgcggg ttaactttat ctgcatcgat gttgaatttg gcgattgcgt
     4081 cagcaaccac tttcttatcg atttcgccac gtttagccag ttcgcccagc gccgcaacca
     4141 cgacataaga agcatcaact tcgaagtggt gacgcaggtt ctcacggctg tcggaacgac
     4201 cgaagccatc agtacccagt acgcggtagt cgtcagccgg tacgtaagta cggacctgct
     4261 cagcgaacag tttcatatag tcggtagatg ccactgccgg agcgtcgttc atcacctgag
     4321 cgatatacgg aacgcgcgga gtttccagcg ggtgcagcat gttccagcgt tcacaatcct
     4381 gaccatcacg cgccagctcg gtgaaggagg tcacgctata aacgtcagaa cctacgccgt
     4441 aatctttcgc caggatctct gccgcttcac ggacgtgacg caggatagaa ccggagccca
     4501 gcagctgaac tttacctttg ctaccttcaa tggtttcgag tttgtagata cctttacgga
     4561 taccttcctc agcaccttcc ggcattgccg gcatgtggta gttttcgttc agcgtagtga
     4621 tgtagtagta aacgttctct tgtttttcac cgtacatacg ctccagaccg tcatgcatga
     4681 tgacagcaac ttcgtaagcg taagccgggt cgtaagagat acagttcggg atagtcagcg
     4741 actgaatgtg gctgtgacca tcttcgtgct gcagaccttc accgttcagg gtggtacgac
     4801 cggaagtacc gccgatcagg aagccacgcg cttgctggtc gccagccgcc cagcacagat
     4861 cgccgatacg ctggaagccg aacatcgagt aatagatgta gaacggaatc atcggcagat
     4921 tgttggtgct gtaagaggtc gccgctgcca gccaggaaca ccctgcgccc agctcgttga
     4981 tcccttcctg cagaatctga cctttctcgt cttctttata gtaagcaacc tgctcgcggt
     5041 cctgcggggt gtactgctga ccgttcgggc tgtaaatacc aatctgacgg aacagacctt
     5101 ccataccgaa agtacgcgct tcgtcggcga tgatcggtac cagacgatct ttgatcgact
     5161 tgttcttcag cattacgttc agggcacgaa cgaaagcgat agtggtagag atctctttgc
     5221 tctgctcttc cagcagcgcg ccgaagtctt gcaggctcgg cagctcaagc ttctcggtga
     5281 agttcggctg acggcttggc agataaccgt gcagtttctg acgctgtgcg tgcagatagg
     5341 tatgctcttc agaaccttcc gggaaggtga tgtacggcag tttttcgata tctgcatcag
     5401 acaccggcac attgaaacgg tcgcggatgt gacgcacgcc gtccatgttc attttcttaa
     5461 cctggtgcgc gatattttta ccttcagccg cgtcgcccat gccgtaacct ttaatggtat
     5521 gagcaaggat tactgtcgct ttgcctttgg tttcctgcgc tttcttgaat gcagcgtaga
     5581 ttttcttcgg atcgtgacca ccacggttca gtgcccagat ctgctcgtca gtccagtctg
     5641 caaccagtgc tgcggtttca ggatatttac cgaagaagtg ttcacgaacg tacgcaccat
     5701 ctttcgattt gaaggtctgg tagtcgccgt caacggtttc gttcatcagc tggatcagtt
     5761 taccgctggt atctttacgc agcagttcat cccaacggct accccacatc actttgatca
     5821 cgttccagcc agcaccttcg aagatgcctt ccagttcgtt gatgatcttg ccgttaccgg
     5881 tgaccgggcc gtcaagacgc tgcaggttac agttgataac gaagaccagg ttatccagtt
     5941 tttcacgggt agcgatggtg atcgcacctt tggattccgg ttcgtccatt tcaccgtcgc
     6001 cgaggaacgc gtaaacggtc tgtttagagg tatctttcag gccacggtgt tccagatatt
     6061 tcaggaattt agcctggtaa atagcaccaa tcggacccag acccatagat acggtcggga
     6121 actgccagaa ttccggcatc agtttcgggt gcggatagga agagaggcca ttgccgtgaa
     6181 cttcctgacg gaagttatcc agttgctcct gagtcagacg accttccagg aaagcacgag
     6241 cgtaaacgcc cggggagatg tggccctgga agtaaaccag gtcgccgcca tcctgctcgt
     6301 tgcgtgcacg gaagaagtgg ttaaagcaca catcataaat ggttgcggaa gactggaagg
     6361 acgccatgtg accgcccagt tcgaggtctt ttttcgacgc acgcagaacc gtcatgatgg
     6421 cgttccagcg gatagctgaa cgaatacggc gttccagttc cagattaccc ggatactccg
     6481 gttgttcttc aacggggatg gtgttgatgt agttgctgat accggtgcct gcggctacgt
     6541 tgacaccgcc tttgcgggct tcagcaagca gttggtcgat cagatactga gcacgctcaa
     6601 caccttcttc acggatgacc gattcgatcg cctggagcca gtcgcgagtt tcgatcggat
     6661 ccacgtcatt tgggaaacgt tctgacatgg gttattcctt atctatctaa taacgttgag
     6721 ttttctggaa cctgtcccat tgaactctcg ccggaaagct caataagaca ggttctacgt
     6781 ttagttgccg cgcttttata tgcgcttgat ttacaacatc ttctggataa tttttaccag
     6841 aaaaatcact aattctttcg ttgctccaga cgacgcagag aacgctcacg gcggctctct
     6901 tcacgacttc tgtcgagcaa aatttcttcg ataaaggcca gatggcgatg cgatgcttcg
     6961 cgcgcttctt ccggcttacc ggccataatc gcttcaaata tgcgggtgcg gtgactactc
     7021 accagcggca gcatctcgcg acgcgaatag agcaattcga agttctggcg gacattctgg
     7081 gccaacatcg gctccataca ccttagcaga tgaagcagaa ccacattgtg ggccgcttcg
     7141 gtgacggcaa tctgatactg gagtacggcg tttgattccg cgtccagatc gccagactgc
     7201 tgcgccagct ctatggcgtg gtggagttca cggatgcgtt ccttgtcttc atcggtacta
     7261 cgcagcgcgg cgtaataagc ggcgatacct tccagggcgt gtcgtgtttc gagcaagtca
     7321 tactgtgatt caggatggtc ggagagcagc tccaccagcg gatcgctgaa gctttgccat
     7381 aggctgctct ggacaaaagt gccgccaccc tggcgacgaa gcaacaagcc cttcgcttcg
     7441 agacgttgaa tcgcctcacg caaggaggga cgggagacgt cgaactgttt tgccagttcg
     7501 cgttccggtg ggagtttttc gcccgggcgg agagtgcctt cgaggatcaa aaactccagt
     7561 tgctgctcaa tcacatcgga gagttttggt tggcggattt tgctgtaggc catgagttcc
     7621 tgtcttaagc cacttgccga agtcaattgg tcttaccaat ttcatgtctg tgacgctaaa
     7681 gtaacaaagt attcacctta tgtccataca ggttttgatt gaaatcatga aactgtgcac
     7741 attttaacaa cttgacatat ataacgtttc aaaattgtaa ctatgcacaa atgtagactt
     7801 tacgtaggaa agggattttt taacgattat taaactataa aaatccgaat tgaaccgatt
     7861 cacttaccaa ttttttgatt tttaagtcaa taaaaacgaa tttaaattca ttctgcatat
     7921 tgagaggggt tgaggctgag ctttacaaac ggtttctttt taagcaactc atcttcaacc
     7981 atgcataaag cgggtgcatt cgctgccaca taccattatt cttgatctga cggaagtctt
     8041 tttgtaacaa ttcaaacttc tttgatgtaa acaaattaat acaacaaacg gaattgcaaa
     8101 cttacacacg catcactgcg tagatcaaaa aaacaatcac cgcacgaggt ttcatgatgg
     8161 aaggtcaaca gcacggcgag cagctaaagc gcggccttaa aaaccgccat attcagctta
     8221 tcgcgctggg tggcgcgata gggacagggc tattcctggg tagcgcctcc gtaatacagt
     8281 ccgcagggcc agggattatc ctgggttacg ccattgctgg ttttatcgcc tttctgatca
     8341 tgcgtcagtt gggtgaaatg gtggtcgaag aacctgtcgc aggctccttt agccactttg
     8401 cttataaata ctggggcagt tttgccggtt tcgcctctgg ctggaactac tgggtactgt
     8461 acgttttagt tgccatggca gagctgactg ccgtgggtaa atacattcag ttctggtatc
     8521 cggaaatccc aacctgggtt tctgccgccg tattctttgt ggtgattaac gccatcaacc
     8581 tgaccaacgt taaagtgttt ggcgagatgg agttctggtt tgccattatc aaagttatcg
     8641 cggtggtagc gatgatcatc ttcggcggct ggctgctatt cagtggcaac ggcggcccgc
     8701 aggcgaccgt tagcaacctg tgggatcagg gtggtttcct gccgcacggc ttcaccgggc
     8761 tggtgatgat gatggcgatt atcatgttct cgttcggtgg tctggaactg gtggggatca
     8821 ccgcagcaga agctgataac ccggagcaaa gtataccgaa agcaactaac caggttatct
     8881 accgcatcct gattttctat attggttcgt tagccgttct gctctcactg atgccgtgga
     8941 cccgcgttac cgccgatacc agtccgtttg tgctgatctt ccacgagtta ggcgataccc
     9001 ttgtggcgaa tgcgctgaac atcgtggtac tgactgcggc gctctccgtg tacaacagct
     9061 gcgtatattg caacagccgt atgctgtttg gtctggcaca acagggtaat gcgccaaaag
     9121 cgctggcgtc tgtcgataaa cgtggtgtac cagtaaatac cattctggtg tctgcactgg
     9181 taacggcgtt gtgcgtactg attaactacc ttgccccaga gtccgctttc ggactgttaa
     9241 tggcgctggt ggtatccgca ctggtgatca actgggcgat gatcagtctg gcgcatatga
     9301 aattccgtcg cgccaaacag gaacaaggcg tggtaactcg cttccctgct ctgctttatc
     9361 cgctgggtaa ctggatctgc ctgctgttta tggcggcggt actggtgatt atgctgatga
     9421 ccccaggaat ggcgatttcg gtatacctga tcccggtatg gctgatcgtg ctaggtatcg
     9481 gctatctgtt taaagagaaa accgccaaag ccgtaaaagc gcattaatct ctctacgccc
     9541 tcacccgtac agggtgaggg caataatctt tacaccaacg ccccgtaaat cgtcagtagc
     9601 gcaatcacca ccacgaccac gaacgaggtt ttcttcgcca ttgaaaccgc tgccttcggc
     9661 gtctccacct tatcgacatg cggttcacgc gccagagaga actgcgccag agagaactgc
     9721 gccagacgcg ttaatacctg atattgcgaa gtatggaaat cacccagcga agcaaaccag
     9781 gccggtaacg ctttctcacc atgaccgatc aaggcatata ccacacccgc aagacgaacc
     9841 ggcacccaat ccagtacatg aagcactgca tcaatgccgg actgtaaacg atgatgcggc
     9901 gtctggtatc gcgccagcca gtattgccat gcacgcaaaa acgcataccc catcagcgta
     9961 acgggtcccc aggttccccc cacaatcagc cagaacagcg gtgcaagata aaaacgaaag
    10021 ttaatccaca gcaatgcatt ttgcagctca cgcaaatact cacgttcgtc gcagcctgcc
    10081 gggacgccgt gaatcatggt gagttcgcca gccatcgtgg cacgggcatg gctatcatta
    10141 cgtgaagcag ctgtcagata agcatgataa tgaagacgaa ctttacctgc gccaatacac
    10201 agcaaaccaa tcagcagcca caccagcagc gtgggaacgt tgaacaatac tccctgcaat
    10261 gcgcgtaaca gtaaaaaagt cacgctcatc gcaataatgg tcatgcctaa cgtgcgcccg
    10321 agagaaaaat gtttcacccg ccgaaagaac gcttcaagac gatgatcaag ctgccagtgc
    10381 tcgcccaact taaacaggcg ctcgaaaatt aacaccagta aggttgtaaa tagcgtcatg
    10441 ttgtctcctt gctgaccagc acacgaaact gtgcccaatc aaatgcagga ccgggatcgg
    10501 ttttccgatc cggcgcaata tcacaatggc ccgtcatgtt tttagcgata tccggatagc
    10561 aatcaatcag tgcccgcgta accgccgcaa gctgttgata ctgcgcatcg gtatacgcca
    10621 gcgtatcggt gccttcaagc tcaatcccaa tagaaaaatc attgcagcgt tcacgcccct
    10681 gatactgaga gactcccgca tgccaggcac gtttatcgaa aggaacatac tggactattt
    10741 caccatcacg gcgaatcaaa cagtgagcgg agacgcgcaa atgggcgatc tcagcaaaga
    10801 aaggatgtgc ctgcggatca atagttccag tgaataatgc gtcgatccac ggaccgccaa
    10861 actcgcctgg cggcaggcta atattgtgca ccaccagcag ggtgggtgtt tcgtcatccg
    10921 ggcggcaatc gtaatgtggt gagggaacgc ggcgcgcgcc aaccagccac ccctgttcta
    10981 acaacatgca ggatctcctt atatgtggtg ctaatacccg gttcagagta gcatgtttct
    11041 accttatgat tcgttagcta tctggagttt taacatgccg cctcgccgct acaaccctga
    11101 cacccgacgt gacgagctgc tggaacgcat taatctcgat atccccggcg cggtggccca
    11161 ggcgctgcgg gaagatttag gcggaacagt cgatgccaac aatgacatta cggcaaaact
    11221 tttaccggga aattctcgct ctcatgccac ggtgatcacc cgcgagaatg gcgtattttg
    11281 tggcaaacgc tgggttgaag aggtgtttat tcaactggca ggcgacgatg tcaccataat
    11341 ctggcatgtg gatgacggcg atgtcatcaa cgccaatcaa cccttgttcg aacttgaagg
    11401 cccatcccgc gtgctgttaa cgggcgaacg cactgcgctt aattttgtgc aaaccctttc
    11461 aggagttgcc agtaaggtac gccactatgg cgaattactg gaaggcacca acacgcagtt
    11521 gttggatacg cgcaaaacct tacctggcct gcgttcagct ctgaaatacg cggtactttg
    11581 cggcggcgga gcgaatcacc gtctggggct ttctgatgcc ttcctgatca aagaaaacca
    11641 tattattgcc tccggctcag tgcgccaggc ggtcgaaaaa gcgtcctggc tgcatccgga
    11701 tgcgccagta gaagtcgaag tagagaatct ggaagaactt gatgaggccc tgaaagccgg
    11761 agccgatatc atcatgctgg ataacttcga aacagaacag atgcgcgaag ccgtcaaacg
    11821 caccaacggc aaggcgctac tggaagtgtc tggcaacgtc actgacaaaa cactgcgcga
    11881 atttgccgaa acgggcgtgg actttatctc cgtcggtgcg ctaactaaac acgtacaagc
    11941 actcgacctt tcaatgcgtt ttcgctaatt gctgacagat ttatccgctc catcgcgggc
    12001 ggataatctc cccttcccca actttcttcg taacgcctcg caaatttctt gtctttcgct
    12061 gcaacgaaat aaaaaacctc ggaatctgct ttcccgtttc gttttttgcc cctcgcctgt
    12121 gctgatggcg tttgccaaag tagcaccaac caaatcaagg agcgaaacag atggacaagc
    12181 aacgcggttt tacacttatc gaactgatgg tggttattgg catcattgcc attttaagcg
    12241 ccattggtat tcccgcttat caaaactacc tgcgcaaagc cgcactcacc gacatgctac
    12301 aaacctttgt gccttaccgt accgccgtag agttgtgcgc gctggaacat ggtggattag
    12361 atacctgcga cggtggcagc aatggcattc cctcgcctac caccacccgc tatgtttcag
    12421 ccatgagtgt ggcaaagggc gtggtgtcgc tgaccgggca agaaagtctc aatgggctaa
    12481 gcgtcgtcat gacgccaggt tgggataacg caaacggcgt caccggctgg gcgcgcaact
    12541 gcaatattca aagtgacagc gcattgcagc aagcctgcga agatgtcttc cgctttgatg
    12601 acgccaacta aggagcggca atgaatattc cacagctcac ggccctgtgc ctgcgttatc
    12661 agggagtctt gctggatgcc agcgaagaag tggttcatgt tgcggtggtc gatgccccct
    12721 cacatgagtt gctggacgca ttgcatttcg ctaccaccaa acgtattgag atcacctgct
    12781 ggacgcgcca acaaatggaa ggtcacgcca gtcgcacaca acagacattg cccgtagctg
    12841 ttcaggagaa gcatcagccc aaagcagagt tgctgactcg aacgttacaa tctgcgctgg
    12901 aacaacgcgc gtctgatatt catatcgaac cagcggacaa tgcctaccgc atccgcttgc
    12961 gtatcgacgg cgtattgcat cctttaccgg atgtttcacc ggatgccgga gtcgcattaa
    13021 ccgccagatt aaaagtgctg ggaaacctgg atattgcgga acatcgcctg ccgcaggacg
    13081 ggcaattcac tgtcgaactg gcaggaaacg ccgtctcatt tcgtattgcg accttaccat
    13141 gtcggggtgg tgaaaaggtg gtattaaggt tgttacagca ggtgagccag gcactggatg
    13201 tcaacacgct tggaatgcag ccgttacaac tggcggactt tgctcatgcc ttgcaacaac
    13261 cacagggact ggtgctggta actggcccta caggcagcgg caaaacggtc acgctttata
    13321 gtgccctgca aacgctgaat accgctgaca ttaatatttg tagcgtcgaa gatccggttg
    13381 agatccccat agccggacta aaccagacgc aaatccatcc gcgtgccgga ctcacctttc
    13441 agggcgtgtt gcgtgcgtta ttgcgccagg atcctgacgt catcatgatc ggagagatcc
    13501 gcgatggcga aacagcagag atcgctatta aagcggcgca aactggtcac ctggtgttgt
    13561 ctaccctaca cactaattcc acctgcgaaa cgctggtacg tttacagcaa atgggggtcg
    13621 cccgctggat gctatcatcg gcgcttacgc tggtaatagc ccagcgtctg gtacgcaaac
    13681 tttgcccaca ttgtcgccgg cagcaagggg agcccatcca cattccagac aatgtatggc
    13741 catcgccgct gccccactgg caggcacccg gttgtgtaca ttgctaccac ggtttttatg
    13801 gtcgtacggc cttatttgaa gttctgccca taacgccggt cattcgtcag cttatttccg
    13861 ctaataccga cgttgaatcg ctgaaaacgc acgcacgaca ggcgggtatg cgtacgcttt
    13921 ttgaaaacgg ctgcctggcc gtagagcaag gcttaaccac ctttgaagag ttaatccgcg
    13981 tactggagat gccgcatggc gagtaagcaa ctctggcgct ggcatggcat aaccggcgac
    14041 ggcaatgcgc aagatgggat gctatgggca gagagccgta ctttactgct tatggcacta
    14101 cagcaacaga tggttacccc actaagcctg aagcgaatcg ccatcaattc tgcgcagtgg
    14161 cgaggagata aaagcgcgga agtcattcat caactggcga cgctactcaa agcagggtta
    14221 acgctttctg aagggctggc tctgctggcg gaacagcatc ccagtaagca gtggcaagcg
    14281 ttgctgcaat cgctggcgca cgatctcgaa cagggcattg ctttttccaa tgccttatta
    14341 ccctagtcag aggtatttcc gccgctctat caggcgatga tccgcacggg tgaactgacc
    14401 ggtaagctgg atgaatgctg ctttgaactg gcgcgtcagc aaaaagccca gcgtcagttg
    14461 accgacaaag tgaaatcagc gttgcgctat cccatcatca ttttagcgat ggcaatcatg
    14521 gtggttgtgg caatgctgca ttttgttctg ccggagtttg ccgctatcta taagaccttc
    14581 aacaccccac taccggcact aacgcagggg atcatgacgc tggcagactt tagtggcaaa
    14641 tggggctggc tgctggtgtt gttcggcttt ctgctggcga tagccaataa gttgctgatg
    14701 cgccgcccta cctcgcttat cgcgcggcag aaattgttgt tacgaatccc gattatgggt
    14761 tcactgatga ggggacaaaa actcacgcag atctttacga ttctggcgct gacacaaagt
    14821 gcaggcatta cttttttaca gggcgtagag agcgtcagag aaacaatgcg ctgcccatac
    14881 tgggtgcaac ttctgacaca aatccagcac gatatcagta acggtcaacc catctggctg
    14941 gcgctaaaaa ataccggtga gtttagcccg ctctgtttg
//
LOCUS       DAJVTL010000109        14977 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.111, whole genome shotgun sequence.
ACCESSION   DAJVTL010000109 DAJVTL010000000
VERSION     DAJVTL010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14977)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14977)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14977
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.111"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..200
                     /locus_tag="OQQ26_003209"
     CDS             <1..200
                     /locus_tag="OQQ26_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1858569.1"
                     /translation="GVGVRLLNKDQTNIVLGTAAPDIDLAPTSSEQTLNFFAWMEQID
                     QATPVTPGAVTANATYVLDYK"
     gene            251..2710
                     /locus_tag="OQQ26_003210"
                     /pseudo
     CDS             251..2710
                     /locus_tag="OQQ26_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706516.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            2725..3456
                     /locus_tag="OQQ26_003211"
     CDS             2725..3456
                     /locus_tag="OQQ26_003211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706517.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCS1858570.1"
                     /translation="MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDN
                     RSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGDRE
                     TLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPVALRKKAGEKVELQLQVSQQG
                     NQLTLKNPTAYYLTIAYLGRNENGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMD
                     DYGALRMTTLNCSGQCRLQAVEAKK"
     gene            3453..4514
                     /locus_tag="OQQ26_003212"
     CDS             3453..4514
                     /locus_tag="OQQ26_003212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1858571.1"
                     /translation="MSAGKGVLLVICLLFLPLKSALALNCYFGSSGGSVEKSEVIQPV
                     AVPGNAKPGDKIWESDDIKIPVYCDNNTNGNFESEHVYAWVNPYPGGQDRYYQLGVTY
                     NGVDYDASLRKSRIDTNQCVDSKNINIYTPEQIIAMGWQNKICSGDPANIHMSRTFLA
                     RMRLYVKIREMPPHDYQSTLSDYIVVQFDGEGSVNEDPTAQNLKYHITGLENIRVLDC
                     SVNFSISPETQVIDFGKFNLLDIRRHNMTKTFSIKTTKSQNDQCTDGFKVSSSFYTEE
                     TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLIYEKTYTAELSSIAG
                     TPIEAGPFDTVVLFKINYN"
     gene            4666..5712
                     /locus_tag="OQQ26_003213"
     CDS             4666..5712
                     /locus_tag="OQQ26_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415243.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HCS1858572.1"
                     /translation="MPVLQWGMLCVLSLLLSIGFLAVHLPATLLLGPMIAGIIFSMRG
                     ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLL
                     VRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM
                     MLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ
                     SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM
                     AWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA
                     IARFISTYAPKRSA"
     gene            complement(5709..6500)
                     /gene="nei"
                     /locus_tag="OQQ26_003214"
     CDS             complement(5709..6500)
                     /gene="nei"
                     /locus_tag="OQQ26_003214"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HCS1858573.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKSYQSQLIGQH
                     VTHLETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL
                     LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
                     QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLDIPRFSYATRGQVDE
                     NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
     gene            complement(6536..7270)
                     /gene="pxpA"
                     /locus_tag="OQQ26_003215"
     CDS             complement(6536..7270)
                     /gene="pxpA"
                     /locus_tag="OQQ26_003215"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HCS1858574.1"
                     /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
                     REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
                     VKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
                     ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLH
                     GDGEHVLAFARRLRATFAKKGIVVAA"
     gene            complement(7260..7715)
                     /locus_tag="OQQ26_003216"
                     /pseudo
     CDS             complement(7260..7715)
                     /locus_tag="OQQ26_003216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000388010.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase"
     gene            complement(7720..8181)
                     /locus_tag="OQQ26_003217"
     CDS             complement(7720..8181)
                     /locus_tag="OQQ26_003217"
                     /inference="COORDINATES: protein motif:HMM:TIGR00724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase/urea amidolyase family protein"
                     /protein_id="HCS1858575.1"
                     /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV
                     GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL
                     KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLKVGIGGLEGRLLKDGDRQIEA"
     gene            complement(8175..8831)
                     /gene="pxpB"
                     /locus_tag="OQQ26_003218"
     CDS             complement(8175..8831)
                     /gene="pxpB"
                     /locus_tag="OQQ26_003218"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HCS1858576.1"
                     /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV
                     EAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
                     AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
                     GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
                     "
     gene            complement(8854..9597)
                     /gene="ybgI"
                     /locus_tag="OQQ26_003219"
     CDS             complement(8854..9597)
                     /gene="ybgI"
                     /locus_tag="OQQ26_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HCS1858577.1"
                     /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVMGEIEPLVLWGELTMPVPGLELASWIEARLGRKPLWCGDT
                     GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTDLDVTFIDIPNPA"
     gene            9868..11349
                     /gene="dtpD"
                     /locus_tag="OQQ26_003220"
     CDS             9868..11349
                     /gene="dtpD"
                     /locus_tag="OQQ26_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HCS1858578.1"
                     /translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND
                     THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
                     LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY
                     AQEEYNWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
                     LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
                     SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
                     SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY
                     SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
     gene            complement(11499..12917)
                     /gene="phrB"
                     /locus_tag="OQQ26_003221"
     CDS             complement(11499..12917)
                     /gene="phrB"
                     /locus_tag="OQQ26_003221"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HCS1858579.1"
                     /translation="MTTHLAWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWET
                     HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY
                     NYQYEVNERARDVDVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
                     RLREGMPECVAAPKVRSSGSIKPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCEN
                     GAGEYEQQRDFPAVEGTSRLSVSLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
                     IWREFYRHLMTYYPSLCKHRPFIAWTDRVQWQSNPAHLQAWQKGKTGYPIVDAAMRQL
                     NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
                     AAPYFRIFNPITQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWVQKAGVKLDYPQP
                     IVEHKEARVQTLAAYEAARKGK"
     gene            complement(12914..13423)
                     /locus_tag="OQQ26_003222"
     CDS             complement(12914..13423)
                     /locus_tag="OQQ26_003222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HCS1858580.1"
                     /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
                     LAHSQPEYRKLGPFVADIHQWQNLDDFYNQYRQRVIVLLSHPANPRDHTNVLMHVQGY
                     FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
                     INLRHSGVL"
     gene            complement(13708..14082)
                     /locus_tag="OQQ26_003223"
     CDS             complement(13708..14082)
                     /locus_tag="OQQ26_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858581.1"
                     /translation="MFTKLSIAILLAFSAYVHAETSAPIFFEDVGSIDSWFSIKYQKY
                     ENVKDEQYPEILIYYGVKGSGINRVDGWFFSCAKAGRTCSLIFMADFGESRYFKPAKI
                     AMNKNNLIIRTSDVEIAFKITK"
     gene            complement(14067..14858)
                     /locus_tag="OQQ26_003224"
     CDS             complement(14067..14858)
                     /locus_tag="OQQ26_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000171008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1858582.1"
                     /translation="MTLAYRSLRIIHLYHCDYRGLPLTLISPDGATEWCAEYDEWGNL
                     LNEENPQHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLEGGWNQYVY
                     ASIHPTYSIDPLGLIDKPAPVFNRELNSDPYYLAVNNCYSYALNRYGNLGSRIFGGGG
                     LQPGELSGKEFSKLTCGSIFEASKNDGAKDLDNGSCPSGYHKAQLFIRPHNFIGMGGD
                     YHWYRQDANGEWSDKQGVGAIRFRGKDPFPPIDYPEKCGTICLPN"
BASE COUNT         3667 a         3968 c         3553 g         3789 t
ORIGIN      
        1 ccggcgtcgg cgtgcgttta ttgaataaag atcaaaccaa tatcgtttta ggcactgctg
       61 ctccagacat cgacctggca ccgacctcca gcgaacaaac gctgaatttc tttgcctgga
      121 tggaacaaat tgatcaggct acacctgtaa cgccaggcgc agttacagcg aatgctacct
      181 acgtgctgga ttataaataa gtattacttt ggcggcgcta tcgccgcctt tcttcaaata
      241 tttatcaggt atggacaccg tgaatattta tcgactctct tttgtatcct gcctggttat
      301 ggcgatgcct tgcgcattgg cggtcgaatt caaccttaat gttctcgata aatcgatgcg
      361 cgaccgcatt gatatttcat tattaaagga aaaaggagtc attgctcccg gtgaatattt
      421 tgttagcgtt gcggtgaata acaaccaaat cagtaatggg caaaaaatca actggcaaaa
      481 aaagggtgac aaaaccattc catgcatcaa tgattcactg gtcgataaat ttggcttaaa
      541 acctgaagtc cgtcagtcgt taccattgat aaatcagtgc gtcgatttta gctcccgacc
      601 tgaaatgctc ttcaattttg atcaggccag tcagcaacta aatatcacca ttccgcaggc
      661 ctggctggcg tggcactcag ataactggcc cccaccctcc acatggaaag aaggtgtcgc
      721 cggtgtcctg atggattaca acttgtttgc cagcagctac cgcccacagg atggcagcag
      781 cagcactaac cttaacgcct atggaacagc cggaatcaac acgggggcat ggcgcttacg
      841 cagtgattat cagttgaatc agactgatag cgatgataac catgaacagt caggcgaaat
      901 atcacgcacc tatctttttc gcccgttacc gctattaggt tcaaaattaa ccctcggcga
      961 aacggatttt agttccaata ttttcgacgg tttttcttat accggcgcgg cactggcaag
     1021 tgacgatcga atgttgccat gggaactacg cggctacgcc ccacaaatta gcggtattgc
     1081 acagaccaat gccacggtga cgatcagtca atcaggccgc gtcatttacc agaaaaaagt
     1141 cccaccaggc ccatttatca ttgacgacct taatcagtcc gtccagggga cgctggatgt
     1201 caaagtgacg gaagaagatg gtcgggtgaa gaatttccag gtttcggcag catcgacgcc
     1261 cttcctgact cgccagggac aggttcgcta taaactggct gcgggtcagc cacggccctc
     1321 catgtcacat caaactgaaa atgaaacctt ttttagcaat gaagtttcct gggggatgct
     1381 ctcaaacacc tcgctgtacg gcggcctgct gctttctggt gatgacgacc attctgccgc
     1441 aatgggtatc gggcaaaata tgctgtggct tggcgcgctg tcgtttgatg tcacctgggc
     1501 cagtagccat tttgatactc agcaggacga gcggggctta agctaccgat ttaactacag
     1561 caaacaagtg gatgccacca acagcacgat ttcgctcgcc gcttatcgct tctccgatcg
     1621 tcattttcac agctacgcca actatctgga tcacaaatac aacgacagcg atgcgcagga
     1681 cgaaaaacag acgatcagct tatccgtggg ccaaccgatt accccactaa acctcaatct
     1741 ttacgccaac ctgctgtatc aaacctggtg gaatgcagac gcctccacga ctgccaacat
     1801 cacagccggt tttaatgttg atattggtga ctggagagat atctcgatct caacgtcatt
     1861 caatacgacc cattacgaag ataaagatcg cgacaaccag atttacctgt cgatttcgct
     1921 ccccttcggt aacggtggtc gggttggcta tgacatgcaa aacagtagcc acagcaccac
     1981 acaccgcatg tcgtggaacg atacgctgga tgaacgtaat agctggggca tgtctgccgg
     2041 actgcaatcc gaccgtccgg acaatggagc ctaggtgagc ggtaactatc agcatctgag
     2101 ttcagcgggt gagtgggata tttctggtac ctatgccgcc aatgattaca gttccgtcag
     2161 cagcaactgg agcggttctt tcaccgcaac ccaatatggt gcagcgtttc atcgccgcag
     2221 ctccaccaat gaaccacgcc tgatggtcaa caccgatggc gtggcagata ttccggttca
     2281 gggcaatctc gactacacca accattttgg tattgcggtg gttccattga tttccagtta
     2341 ccagccttcc accgtggcgg tcaacatgaa tcacttaccc gacggcgtaa cagttgcaga
     2401 aaacgttatc aaagaaacgt ggattgaagg cgcgataggt tacaaatcac tggcttcccg
     2461 ttccggtaaa gacgttaacg tcatcattcg caacgtcagc ggtcagttcc ctcccctcgg
     2521 tgcggatatc cgccagcatg acagcggcat tagcgtggga atggttggcg aggaaggaca
     2581 cgcctggtta agcggagtcg ctgaaaatca aaagtttacc gtggtctggg gtgatagcca
     2641 gcattgctcg ttccatcttc ctgaacatat ggaagacacc gcaaatcgtc tgattttacc
     2701 ttgtcattaa ttaaggaaat gaaaatgaca tttatgaaag gactacccct tttgttgttg
     2761 gttgccagtc tgtgcagcca cgctgcacta caacccgatc gcactcgtat tgtgtttaac
     2821 gctaatgata aagctaccag cctgcgggtg gataatcgta gcgataaact cccctacctc
     2881 gcttattcct ggctcgaaaa tgaaaaaggg gagaaaagcg atgatcttct ggtcgccctg
     2941 ccaccgatac aacgtctgga accgaaagca acaacgcagg tacggatagt aaagcaagcc
     3001 tcgaccacaa aattaccggg cgatcgcgaa acgctatttt tctacaatat gcgtgaaatt
     3061 cctcccgccc cggaaaaaaa tagcgaccat gccgttctgc aagtcgccat tcagagtcgt
     3121 atcaaggtgt tctggcgacc ggttgcatta cgcaagaaag caggagaaaa ggtcgaactg
     3181 cagttacagg tcagccagca gggcaaccaa ctgacactga aaaatcctac cgcgtattat
     3241 ctgaccattg cctatctggg gagaaatgaa aatggcgttc tccccggctt caaaaccgtg
     3301 atggttgcgc cttttagtac ggtcaataca aacaccggaa gttatagcgg cagccagttt
     3361 tatctcggtt atatggatga ttacggcgcg ttacgcatga cgacgctcaa ctgcagcgga
     3421 caatgccgtt tacaagcagt ggaggcgaag aaatgagtgc tggcaaggga gtgttgctcg
     3481 tcatctgtct gttatttctg ccgttgaagt ctgcgcttgc cctgaactgc tactttggtt
     3541 catccggtgg ttcggtagaa aaatcagaag tgattcaacc tgttgctgta ccaggcaatg
     3601 ccaaacccgg tgataagatc tgggaatctg acgatattaa aattcccgtc tattgtgaca
     3661 acaataccaa cggcaacttt gaaagcgaac atgtctacgc atgggtaaac ccctacccgg
     3721 gggggcagga tcgttattat caactcggtg taacttacaa tggtgttgat tacgatgcca
     3781 gcctgaggaa aagtcgcatc gacaccaacc agtgtgtcga cagcaagaat attaatattt
     3841 ataccccaga gcagattatc gcgatgggat ggcagaacaa aatttgctcg ggcgatcccg
     3901 ctaatattca tatgtcgcgt acctttctcg ctcgcatgcg gttatacgtc aagattcgtg
     3961 aaatgccacc gcatgattat caaagcactc ttagcgatta catcgtggtg caatttgatg
     4021 gcgaaggcag tgttaatgag gatcctactg cccaaaacct gaaatatcat attaccggtc
     4081 tggaaaacat tcgcgtgctg gattgcagcg tcaatttttc catttcaccg gaaacacagg
     4141 tgattgattt tggtaaattt aatttgctgg atattcggcg acataacatg acgaaaacgt
     4201 tcagtattaa aacgaccaag agccaaaacg atcaatgcac cgacggattt aaagtcagtt
     4261 cctcgtttta tactgaagaa acgttggttg aagaagataa agcattgttg attggtaatg
     4321 gtctgaagct acgtttactg gatgaaaacg cctcgcctta tacattcaat aaatatgctg
     4381 aatacgccga tttcaccagc gatatgctga tctacgaaaa aacctatacg gctgaacttt
     4441 cgtccattgc aggcaccccc atcgaggctg gccccttcga tacagtggtg ctttttaaga
     4501 ttaactataa ctgatttgcc atgatgccct ttgcagccgg aaagggcatc tctttcagaa
     4561 aattgctgat tttccccttt tccttgattg ctgttatttt ttcctggccc ggctttcttt
     4621 atgctgtatc gatacaccaa agagaaaata atgagggagc gaaggatgcc agttttgcag
     4681 tggggaatgt tatgtgtgct atcacttctc ctttctattg gtttcctcgc ggtacatctc
     4741 ccggcgacgc tattacttgg gccgatgatc gccgggatca tctttagtat gcgcggaatt
     4801 actctgcaac ttccccgctc tgcttttctc gccgcccagg ccattcttgg ctgcatgatt
     4861 gcgcaaaacc tcactggttc gattctcacc accctggccg tcaactggcc gatcgtgctt
     4921 gcaattttac tggtaacgct gctttccagc gccattgtgg gttggttatt ggtgcgctat
     4981 agctcattgc ctggaaatac cggtgcctgg ggctcctctc ctggcggcgc ggcggcaatg
     5041 gtcgctatgg cgcaagatta cggcgcagat attcgcctgg tggcgtttat gcaatatctg
     5101 cgagtgctgt tcgtcgcggg ggccgctgtt ctggtcaccc gcatgatgct gggcgataac
     5161 gctgaagcgg ttaaccagca tatcgtctgg ttcccgccag tgagcattaa tctcctgctt
     5221 actattttgc tcgcggtcgt tgccggtaca gtgggatgcc tgctgcgtct tccttccggc
     5281 acgatgctca tcccgatgct ggcgggcgca gtgctccagt ctggtcagct catcaccatc
     5341 gaactaccgg aatggctgct ggcgatggcg tatatggcaa ttggctggcg gattggtctt
     5401 ggtttcgata aacaaatctt actgcgggca ctacgcccgc taccgcaaat cctgctgtcg
     5461 atttttgctc tgctggctat ttgtgcgggt atggcgtggg ggctgacccg gtttatgcac
     5521 attgatttta tgactgccta tctcgccacc agccccggcg ggcttgatac cgtggcggtc
     5581 atcgccgcag ggagcaatgc cgatatggcg ctcattatgg cgatgcaaac cctacgcctg
     5641 ttcagtattt tgctgacagg gcctgccatt gcgcggttta tttcaaccta tgcgccgaag
     5701 cggtcggcct agtgctggca gccagggcac cagtaaaacg ggcgagatga cagcgtggtt
     5761 ttctcaatga tgccgccaca gcgttcgcac agttcgccat cacgatgaaa aaccttaaag
     5821 cgaaacagcg ccccatgatg cttattctca tccacctgcc ccctcgtagc gtaggaaaat
     5881 cgaggaatat ccagtaacgc gtgtgcgagt gcatccagtt gcgccgcatt gagatctttc
     5941 gctttatgat ttccagtcaa cccaacctgc cagaggatct ccacccgcaa ataattgcca
     6001 agtcctgcca gaaacgcctg atcgagcagt aatccagcaa actgacggtt acgaaagcgc
     6061 ggcgacaata gccgttcctt taccacctcc ggcgtcagat tcggatccag cacatcggga
     6121 ccaacgcgtt gtaaaaacgg atgcgtggtc agttgttccg gcctcaacat ctcaatatcc
     6181 gaggcactat aaagcagaat ggttttgtca gccgtttgca gttttacccg caatactcgc
     6241 gtggtctgcg gctcttcgcc ggtatcaacc acgcgccaga cgccgtaaag ctgattatgg
     6301 ctgtagagcg ttaagtcgtt ggaaaaatga gttaacaacg ccttaccacg cgtttccaga
     6361 tgggtaacgt gttgaccgat aagttgtgat tgataagatt ttaactgcgg gaaagcaaac
     6421 cagacatcag ttagtggttt gcctttgatc gccgcctcca agttatccgc tgcacggcgg
     6481 atctccgggc cttcaggcat ggtgatatcc ttttttcatt ctttattaag cggggttatg
     6541 ctgcgacaac aatccccttt ttggcaaatg tagctcgtaa tcggcgggcg aacgccagaa
     6601 cgtgctcgcc gtcgccatgc aggcagaccg tttgcgccgt gaccgttgcc cattcgccgg
     6661 tgatactttt gactctgccg tgttgcacca tctccagcgt ttgcgccagc gcctgttctt
     6721 cgttttcaat caacgctcct ggctggcttc gcggcaccag cgagccgtca gcctgataac
     6781 cgcgatcggc aaacacttcc tcgcgcgttg tcaggccata ttgcttgcct gcacgaatca
     6841 gctcgcttcc tgccagccca acgagaacca atgctggatc gcaagcgtat accgctctgg
     6901 cgatggcgtc tgccagttgt gcttctttcg ccgcctggtt gtacaacatg ccgtgcggtt
     6961 tgacatgacg cattacgccg ccttgcgcac gggcaatcgt tgccagcgcg ccaatttgat
     7021 acagcgtctg ggcgtaaacg gtttctggcg gcagctgcat ggcgctgcga ccaaaatttt
     7081 ccctgtcggg aaaactcgga tgagcgccaa tcgcgacacc attttttatt gcttcacgca
     7141 cgcaagcctg catggtttgg gcatcgcctg catgaaatcc acaagcaata ttggcagagg
     7201 aaaccagcgt taatagctct gcgtcgctgg cgcagccttc gcccagatca gcgttcaggt
     7261 caattttcat tgtgtagccg ccacgctaat tgttcgaaat aacgttgttg atcttgccgc
     7321 gctttcagtg cctcttccag tgaacactgg acaaaatgaa tcggctgacc gagcggaatt
     7381 tgcgccagat ggtgcatatc agcctcaatg atacaggcaa tacgcggata accaccggtg
     7441 gtctgtgcgt cgttcatcaa cacaatcggc tgcccgttat gcggcacctg caccacgccc
     7501 ggtaacaaac cgtgagataa cagttcgcga tcggtgatgc gttttaaaat ttgcccctgt
     7561 aagcgatagc ccattcggtt actttgcgag ctaagctgcc agggcgaacg ccagaatgca
     7621 tcctgcgagg cgcgatcgaa ctcatgatat tccggccccg gcaaggcgcg aatgcggttg
     7681 ccccacagca gctatttaac gccctgcact tccataaaat cacgcttcga tttgccggtc
     7741 accatccttc agtaaacggc cttccagccc gccaatcccc actttgagat cggtgctgca
     7801 tgaccccatt accggcggaa catcaatacc acccgcgacc gccagataac tgcgcatccc
     7861 gtgctgcggg cgtttaagcg ttaaacgctg acctgctttc atcggcaagc gccagccggt
     7921 ccagacggcg ttatcatcca gccgcgcttc gcaaccggca cccgtcagag caaaccaccc
     7981 atcagtttcg aactcaaccg ttaactgacc gagcgtgatc tccagcgcgg gggcattggc
     8041 gtcattaccc accagcaggt tagcaatgcg taacgcaggc atatccagtg cgccgcagtg
     8101 gctgataccc gactggcgaa aaccgtgacg accgccatcc tgcacagtgg tatacatgcc
     8161 cgcacgaata atcttcagca tactccctcc ttctgcggta caaagcgcac gctgtctccc
     8221 ggacgtaata agatgggttc gtcacgcgcc ggatcaaaca ggctgagtga ggtatgacca
     8281 atcaactgcc agccacccgg cgttgccagc ggataaacgc cagtctgcgg cccgccgatc
     8341 ccgacagaac ctgccggaac gagcaagcgc ggttcagcgc gccgtggcgt gtgtagttgt
     8401 tccggcaaac tcccgagata cgggaagccc ggttgaaaac ctaaaaacca gaccacgtat
     8461 tccacggagg agtgcaattc aacaacctgt ttttcgctca acccgcaatg cgccgcgacc
     8521 accgccaaat ccggtccgcc tgcaccaccg taaaccaccg gaatttcaat aaagcgagac
     8581 tcaggttcca gggcctcgct ctcctcccac cagcgttgca aacgctctat ggcatccagc
     8641 gccagcgact caggattacg caaaatcacc gtgatattgt tcatgccggg aatggcttca
     8701 accacattcg gcatatccac cagacgctgc gccagtcgcc agatccgttt ctggctagcc
     8761 agcgtcaccg gcggttccag ttccagcact accgccgttt cacctatcag ataacaacgc
     8821 gctcgttgca ctttcgatcc ctctgattat tcgttatgca ggattaggaa tatcaataaa
     8881 ggtcacatca agatcggtat tttcattcag ccactcgctc aacgcgcgaa taccaccgcg
     8941 ttcagtggca tggtgacccg cagcataaaa atgcaatccc tgctcgcggg ctgaatgaat
     9001 ggtctgttca gaaacttcgc cagtaataaa agcatccacg ccaaaacgcg cggcgctatc
     9061 gataaaactt tgcccgccgc ccgtgcacca ggcgacgcgc tggaccacct caggtccggt
     9121 atcgccacac cataacggct tacgtcccag acgcgcttca atccaggaag ccagctccag
     9181 tcccggcaca ggcatggtca gctctcccca cagcaccaac ggctcaattt cgcccatgac
     9241 cgtgatcccc aataacgccg ccaactgtgc gttattgccc agctcaggat gtgcgtcaag
     9301 cggcaaatgc cagccataca ggttgatatc attcgccagc aacgttttta aacggttacg
     9361 cttcattccg cgaatgaccg gagattcgcc tttccagaag tagccatgat gcacaatgac
     9421 cgcatccgcg cccagacgca ctgcctcatc gagcaaagcc tggctggcgg tgacaccggt
     9481 aacaattttt tgcaccgtct ctttgccttc cacctgcaaa ccattcggcg cgtaatcact
     9541 aatcgccgcg ctgttcagtt tttcgttaat cagttgttcc agttcggtgt ttttcatctt
     9601 cgcgccttcc gtattctgat agctacaccg ttaacatagc gttacctcgc cagttcgtcg
     9661 atagccaatc ttttgacata ttaagaaaca aacccgacgc caaaagacgc aaattgttta
     9721 tatcatcacg cttcagctaa tgtatattta tgcattcaga cagcatattg cataaataat
     9781 cagatctgta tcaaagtttt aactttaagg aaacacaagc acgccgcgca actattacgt
     9841 gacgttgccg tcaattgtgg aattattatg aataaacacg catcacagcc gcgcgctatt
     9901 tactatgtcg ttgcgctgca aatctgggaa tattttagct tttacggcat gcgtgccctg
     9961 ctgattctct atctcaccaa tcaactaaaa tacaacgata ctcacgccta cgagttattt
    10021 agcgcctact gttcgctggt gtatgtcacg ccaatcctcg gtggcttttt ggcggataaa
    10081 gttctcggca atcgcatggc ggtgatgctg ggggcgttat tgatggcgat cggtcatgtg
    10141 gtgttgggtg caagtgagat ccatccgtca ttcctctatc tgtccctggc gataatcgtt
    10201 tgtggctatg gtctgtttaa atccaatgtc agttgcctgc tcggcgagct gtatgagcca
    10261 accgatccac gtcgtgatgg cggtttctcg ctgatgtatg cagcgggtaa cgtggggtct
    10321 attatcgcac ctatcgcctg tggttacgcc caggaagagt acaactgggc gatgggcttt
    10381 ggcctggcgg cggtgggtat gatcgcgggt ttggtcattt tcttatgtgg caatcgtcat
    10441 ttcacacata cccgcggcgt taataaaaaa gtactgcgtg caacaaactt tctcctgcct
    10501 aactggggat ggctgctggt tctgctggtg gcaacgcctg cgctgattac cgtactgttc
    10561 tggaaagagt ggtcggtata cgccttaatt gtcgcgacta ttattggcct gggtgtactg
    10621 gcaaaaattt atcgcaaagc agaaaaccag aaacagcgta aggagctggg gctgattgtg
    10681 acgctcacct tcttcagtat gttgttctgg gccttcgcac aacagggcgg cagctcgatt
    10741 agcctttata tcgaccgctt cgttaaccgc gatatgtttg gttataccgt tccgactgct
    10801 atgttccagt cgattaatgc cttcgcagtt atgctgtgcg gtgtgttcct ggcgtgggtg
    10861 gttaaagaaa gcgtcgcagg taatcgtacc gtgcgcatct ggggaaaatt tgctcttggc
    10921 cttggcctga tgagcgccgg attctgcatt ctgaccttaa gcgcccgctg gtccgcaatg
    10981 tatggtcact cttctctgcc actgatggtg ttaggcctcg cggtgatggg ctttgcggaa
    11041 ctgtttatcg acccggttgc catgtcgcaa attacgcgca ttgaaattcc gggcgtgacc
    11101 ggcgtattaa ccggcatcta catgctgctt tctggcgcga tcgcgaacta tctggcgggc
    11161 gtgattgcag atcagacatc gcaggcttcg tttgatgctt ccggggcgat caactactcc
    11221 atcaatgcat atattgaagt atttgatcaa attacctggg gcgcactggc gtgtgtagga
    11281 ctggtactga tgatttggct gtatcaggcg ctgaaattca gaaaccgcgc gctggcgctg
    11341 gagtcataat aggccagcac cgatgcctga tgcgacgctt gacgcgtctt atcaggccta
    11401 cgtatttcct gcaatttatt gaatttgcac aaatttgtag gctggattag gcgttcacgc
    11461 cgcatccggc atctgggctc gattgcctga cgcgtctgtt atttcccctt ccgcgccgcc
    11521 tcatacgctg ccaacgtttg tactctcgcc tctttgtgct cgactatcgg ttgcggataa
    11581 tccagcttca cacctgcttt ctgcacccac ttccacggct catgcaccgc tttccctggt
    11641 acatcgcgca gctccggtaa ccatcgacga ataaactcgc cctcacggtc aaatttctcg
    11701 ccctgagtta tcggattgaa aatacgaaaa tacggcgcag catcagtacc cgtagaagcc
    11761 gcccactgcc agccaccgtt attagctgcc aaatcaccat caatcagctg cgacatgaaa
    11821 tatcgctcgc cttcgcgcca gtcgatcaac aaatctttca ccagaaaact ggctgtaatc
    11881 atccgtagcc ggttatgcat ccagccagtg ctgttaagct gacgcatagc ggcatcaaca
    11941 atcgggtatc ccgttttgcc tttctgccag gcctgtaaat gtgcgggatt gctttgccac
    12001 tgcacacgat ccgtccaggc aataaatgga cgatgtttac acaacgaggg gtaatacgtc
    12061 atcagatgac ggtagaactc gcgccagatc agctcactaa gccagacact accggcccca
    12121 ccgtccagcg cctgcggctg ttccgccaac aagcgatgca aacactggcg aggcgataac
    12181 ccgcccgttg ccaggctgac ggacaaacgg ctggtgcctt ccactgccgg aaaatctcgt
    12241 tgttgctcat actctccagc accgttctcg caaaactggc gtaattgcgc aatcgccgct
    12301 ttttcttcca ccgggaaatg cgcagtatcg aaagactgac gaggataatt cagcgtaatg
    12361 gatggcgcgg gctttatcga tccgctacta cgaacttttg gtgcagcgac gcactccggc
    12421 atcccttccc gcagccgttt cagccaggca ttcttaaaag gcgtaaagac tttgtacatc
    12481 tcgtgattgc cggtcatcac cgcccccggc ggcaggatca cgctgtcatc aaatccttca
    12541 cacaccacgt tacgcagcgc tctttcaacg tccacatccc gcgctcgctc attcacctca
    12601 tactgatagt tataaaaaag atgagtaacg ctgttttccg cgcacacctg tttaactatt
    12661 tcgacgctgg cgacaaagtc atccacttca cggaacaata aaggaatacc tttttccgcc
    12721 agcgcgattt gtagcccatt cagttgagca ttgataagtt cagcctgacg cggcgacatg
    12781 ttatgcgtct cccactggcg tggtgtagcg atatacagcg ccagcacgcg tgcagacgaa
    12841 ttgcggcagg cggcagccag tgcgagatta tcgtgcagac gtaaatcctg gcgaaaccag
    12901 gccagatggg tagtcataaa actcctgaat ggcgcaagtt aatcacacgc ggccaaagtt
    12961 cgaaataacg ctgccctgaa agccaggcgt caggataaag cgccatatag tgtttgatac
    13021 gcatcagcgg cgcaagaagt ggttgctcgc cacggcgata actgtcgata agcgcagcca
    13081 gctgctggcg ttctgtggaa tcaatatgcg ggcgaaaata accctgaacg tgcatcaaaa
    13141 cgttggtgtg atcgcgcggg ttggcgggat gagaaagcaa aacaattacg cgttggcggt
    13201 actggttgta aaaatcatcc agattttgcc actgatgaat atcagccaca aacgggccaa
    13261 gtttgcggta ctcgggctga gaatgggcca gaaagacgag tttatagcgg ctgtgataat
    13321 cgagaagcgc cccgcgcgtt aagccatgtt ctttcagtcg atgtaactca tgaagggcga
    13381 agatacggat tagggtgctg tcatcaaatc gttgtagatt cattactgct cctgaacggt
    13441 ataaaggagt aagtgtagac gatggtaaat gaattttatg gggcagagtt tttgcgggga
    13501 agtattttgt tggtaaaaat attatcaact tcatctgagc gagaattatt ctactatttc
    13561 ccgagctgca ttcatttttt gtatttttta ttcttagaaa ataacagttc tcaaagctta
    13621 atcacctcac tattaattgt atttcaaact aataatcgca ctccattttc tctttttaaa
    13681 aaacataaac actgttaaaa caaatattta tttcgttatc ttaaatgcta tttctacatc
    13741 actcgtcctt ataatcaaat tattcttatt catagctatt tttgcaggtt taaaatagcg
    13801 gctttcacca aagtcagcca tgaaaattag actacaagtt ctcccagcct ttgcacatga
    13861 gaaaaaccac ccatcaactc tatttattcc tgaaccttta acaccataat aaatcagaat
    13921 ttctgggtat tgttcatcct tcacgttttc atatttttgg tatttaattg aaaaccaaga
    13981 gtctatactg ccaacatctt caaaaaatat tggagctgat gtttccgcat gaacatatgc
    14041 agaaaatgct aacaaaatgg caatacttag tttggtaaac atatcgttcc acacttttca
    14101 ggataatcta ttggggggaa gggatctttt cctctaaatc taattgctcc cactccttgt
    14161 ttgtcagacc attcgccatt tgcatcctga cgataccagt gataatcccc tcccatgcct
    14221 ataaaattgt gaggacgaat aaacaattga gctttatggt aaccagatgg acaactccca
    14281 ttatctaaat ccttggcacc atcatttttt gacgcttcaa aaatactacc gcaagtgagt
    14341 ttagaaaact cttttccaga taattctcca ggttgtaatc ctccgccgcc aaaaatccta
    14401 ctcccaaggt ttccatacct atttagagca tatgaataac aattatttac ggcaagataa
    14461 tacggatctg aatttagttc tcgattgaat actggagcag gtttatcaat taagcccagc
    14521 ggatcaatag aataggttgg atgtatggaa gcatatacat actgattcca cccgccttcc
    14581 agcccaatcg gatcctgagt gatataccgt ccctgcagcg ggtcataata gcggtggcgg
    14641 ttgtaataca ggccggactc ctcatcatac tgctgccccg gcagacggat aagctgctgc
    14701 aggtgctgcg ggttctcttc attcagcagg ttgccccatt catcatattc tgcgcaccat
    14761 tctgttgccc cgtcagggct gataagcgtc agcggcaggc cgcgatagtc gcagtggtag
    14821 aggtggatta ttcgcagtga tctatatgcc aacgtcatct tatttttcat ctactccaac
    14881 gagtagacaa gttttttatt aaaccattta taccttttac gattaaattt tcttatgtaa
    14941 tagaggtgaa taatcttccc aaaaatccat acaagct
//
LOCUS       DAJVTL010000110        14631 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.112, whole genome shotgun sequence.
ACCESSION   DAJVTL010000110 DAJVTL010000000
VERSION     DAJVTL010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14631
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.112"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(73..4533)
                     /gene="mukB"
                     /locus_tag="OQQ26_003225"
     CDS             complement(73..4533)
                     /gene="mukB"
                     /locus_tag="OQQ26_003225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HCS1858583.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
                     HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
                     ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
                     RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
                     ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS
                     SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
                     GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGD
                     PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAKREVLS
                     ERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHE
                     NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
                     FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
                     SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
                     KKELLNDLQRELQDIGVRADSGAEERARIRRDEQHAQLSNNRSRRNQLEKALTFCEAE
                     MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
                     RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIR
                     TDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKNIQREQNRIRMLNQGL
                     QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
                     PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
                     VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
                     NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGSDEAPSQAS"
     gene            complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="OQQ26_003226"
     CDS             complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="OQQ26_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HCS1858584.1"
                     /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEESQPDSGEEE"
     gene            complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="OQQ26_003227"
     CDS             complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="OQQ26_003227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HCS1858585.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISNCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
                     DEEVTGELPPDLEYEEFNEIREQLTAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="OQQ26_003228"
     CDS             complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="OQQ26_003228"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HCS1858586.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ
                     KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEEKGVSDNMQFIHCAA
                     QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWLVLRPGGVLSLMFYNAHGLLMHNM
                     VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
                     HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
     gene            7458..8237
                     /gene="elyC"
                     /locus_tag="OQQ26_003229"
     CDS             7458..8237
                     /gene="elyC"
                     /locus_tag="OQQ26_003229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HCS1858587.1"
                     /translation="MLFTLKKVIGNMLLPLPLMLLIIGVGLALLWFSRFQKTGKIFIS
                     IGWPALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPHEQIITLD
                     LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGPSGEPRQE"
     gene            complement(8214..9107)
                     /locus_tag="OQQ26_003230"
     CDS             complement(8214..9107)
                     /locus_tag="OQQ26_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HCS1858588.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
                     ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
                     PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN
                     QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV
                     GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFSRCNFDLASKSLLPWLA"
     gene            complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="OQQ26_003231"
     CDS             complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="OQQ26_003231"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HCS1858589.1"
                     /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
                     MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWFG
                     EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
     gene            complement(10004..10186)
                     /gene="ycaR"
                     /locus_tag="OQQ26_003232"
     CDS             complement(10004..10186)
                     /gene="ycaR"
                     /locus_tag="OQQ26_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HCS1858590.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
                     LLETEARVLTADESKS"
     gene            complement(10238..11470)
                     /locus_tag="OQQ26_003233"
     CDS             complement(10238..11470)
                     /locus_tag="OQQ26_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaQ family DNA glycosylase"
                     /protein_id="HCS1858591.1"
                     /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL
                     QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
                     RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWERKPH
                     KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
                     LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
                     AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
                     LVGRIDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGHC
                     PQGLFTDCRTGWEIDPVA"
     gene            complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="OQQ26_003234"
     CDS             complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="OQQ26_003234"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HCS1858592.1"
                     /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGVIRLCYKLKLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTT
                     TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLAHDVE
                     IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
                     RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
                     STGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLAQLTSLASGN"
     gene            complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="OQQ26_003235"
     CDS             complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="OQQ26_003235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HCS1858593.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DNLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
                     IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
                     EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
                     EHRGVYAQLHKMQFGQ"
     gene            complement(14275..>14631)
                     /locus_tag="OQQ26_003236"
     CDS             complement(14275..>14631)
                     /locus_tag="OQQ26_003236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309023.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family protein"
                     /protein_id="HCS1858594.1"
                     /translation="DIEVPAEQKMLSRYWQQVQTTLLQVPHHGSNTSSSLPLIQRVNG
                     KVALASASRYNAWRLPSNKVKHRYQQQGYQWFDTPHQGQVTVNFSAQGWRISSLREQI
                     LPRWYHQWFGVPVDNG"
BASE COUNT         3440 a         4107 c         3626 g         3458 t
ORIGIN      
        1 aatgtgccac ttttttagtg cagaaacgga gttttcggaa aaagaaaagg cggcattgct
       61 gccgccttaa ttttaactcg cctgagaagg cgcttcgtca cttcctggaa gcgtttcagg
      121 gagttgcggc gcaaatcctc gcaggccgac gacgtgaacg tgttcggtat tctggaagac
      181 tttacgtacc agtttatagg tggtgccttt ttccggactg atattttccg gcgctgcgat
      241 gatgagctgc atttgcaaac gctcacacaa ttcaaacagc gtggcgatag aacgagcatc
      301 cagtcgcgct gcttcatcga ggaacagcag gcggcaagga gagatatctt taccgcgcag
      361 gcggcgagat tcatcttccc agctttgtac caccatcacc agaatcgaca taccggtacc
      421 aatcgcctca ccggtcgaca atgcaccaga ctctgcgcgc agccagccat cggaaccacg
      481 gttaacctca acttccattt ccagatagtt gcggtaatcc agcagttctt cgccaatggt
      541 ctgcggcgtg cgctgcccca tatcaatctg cggattaaga cgctgataca atttcgccag
      601 cgcttccgag aaggtcagac ggttgctgtt aaacagatcc tgatgctgct cgtgctgttc
      661 agagagcaca tccagcagca tggcgtgcgt ttcacgcacg ttcacgttga gacgcacgct
      721 gttcacctga ccaaacgata cgttctgcaa cccctggttg agcatacgga tacggttctg
      781 ctcgcgctga atgtttttgc gaatgatgtt cgccacgctg cgggaactga tcgccagttt
      841 ctgttcacgg gaggttaatt cttcggtcag acggctaagt tcgatctcca tctgttcgat
      901 agcttccacc ggatcatcgg tacgaataat atcctgacga atacgttcac gcagatgctg
      961 ataaaccgcc acgaagaact gaattttacg ctccggacgt ttcggatctt ccgacatgcg
     1021 cagcacgtcg cgcagatgtt cgttatccgc caccgccaga cgcagcgcac ctaacgcctt
     1081 atccgacatg gaacgcaaat catcagcgga gagataagcc agctcacgac ggtgtaagcg
     1141 gcgctcaacg ccgttatctt tcaccatgcg catcaccgca caccagcccg ctttggcggt
     1201 cactacctgc tcgcgcatct caaagtaatc ccgctccagc ttgcgcagtt tgcgggtcag
     1261 gttgtccatc tccgcttcgc agaaggtaag cgctttttcc agttgattgc ggcgtgaacg
     1321 gttattgctc agttgcgcat gctgctcgtc acggcgaata cgcgcccgct cttctgcccc
     1381 gctatcagca cgcacgccga tatcctgcaa ttcacgttgc agatcgttga gtagctcttt
     1441 tttggtgtcg taagaacttt tcagcgaagc cagcacctgg ttgtactgac tcaactgcgc
     1501 tgcgtgaccg cgcaacgctt cgcgagcgcg ggtacgctcc gcttccgcct gttccagacg
     1561 ttcacgcagt ttttcgttga gatcgctgtt accgctaagc atttctgccg agtcagaata
     1621 gctaaagtgc gcacgacgct gcaccacttc cgtcagggca aacgcctgct gacgggcatc
     1681 gcgctgcatc tgctgagagt acgcgtaatc ttcttttaac tgttcgaact gttccgggtc
     1741 gctctgcaat accgaaacga tcggttccag tttcgccagt tgattgccaa actgctgaac
     1801 aaaacgcgcg gcttcctggg cttcatccag acgttcgcgg atttcatcga cgcgatccgc
     1861 caggctgtca tcagccaaca ggttgagacg cggcagaatg cggttcagcg ccgtaacgcc
     1921 ttctttcgcc tgctcaaact gaatacgctg ctgctggtta tcattttcat gattactcaa
     1981 cgcccgctcc agttcgacgc gacggctgtt cagttgacgg atttctgctt ccgggtcaga
     2041 ctcaaacgcc accgccagat gactaccgat aaagcggctg aacgcctgat gcagacgctg
     2101 ggttttctgt acatcaaagg agagcgtggc gaagcgttcg gaaagcactt cacgcttggc
     2161 atggaggctt tcaatacggc tttcacgcgc agcacgacca aacagcggca cttccgggaa
     2221 acgtgaataa cgccactgac gatcggcgat tttcaccact accgcttttt ccagctcatc
     2281 aacgctgaac acgctgtcat cgaatgactg cggatcccct tcgatcagat aaagatcttc
     2341 cgggcaatcg gtcaagcctt ccaggtgttc ggttacctgt gacagatctg gcaccacgat
     2401 ggcgtggcgt gacgggccat acagcgctga gaagtacggc gcatcttcca ggctaacgtc
     2461 gtcataaatt tctgacagca gcacaccacc aaaacgctcc gccagcgcgt tcagacgctg
     2521 atcttcagag ccgccaggct ggcttaaacg ttcgatctct tcatcgacgg cgtttttgcg
     2581 cgcgcccact tcatcgcgtt caacaatcgc ctctcgctca cgctccagca actgttgcag
     2641 atattcggtg acgtcctggc tggaagtaaa ctcttcgccg cactgttcgc tcaactggtt
     2701 gagactgttt tgcgctgcca gccaaaccgg cgcacgctgc atcaaactct gaatgcgaga
     2761 ctgcaactgt tcctgctcct ggcgcagtgc catgcgctct tcacgggcgt tagacacgct
     2821 atcggaaaga gaggcaatac gcgcttccag ctcctgatgc agggcttcca gttcgtcaat
     2881 gtcaaaattc ttgccctgac gtttgcagaa atctgccagc agacgctcag cttcttgctg
     2941 ctcgcgcaga cgctgttcca gttcgcttaa gcgcatccgc aacggctgaa cctgctctgc
     3001 caggtgacgc tgatcgaccc cttcgcgcaa tagttcgcga gcgacatccc acgcctcgtt
     3061 acgcgccagc gggccgttga ttgccaccac cagctgataa gcctgctcaa actggctgtg
     3121 cgcggtttgc gccatgctca ttttctgctc aagagagagc attttttcag tcgcttccag
     3181 ctctttcgcc tggaaggttt ccagccattc ggcggcgctg tcggcggtta agtccggcag
     3241 atggcacagt tctttggcgc gattaagcgc agcaatcgcc tggttatact ggatcgcgcg
     3301 cgtttgctgg acgtccagcg cctgctggta gtcagcaagc tggcttttca gctcgtccac
     3361 ttccagttcg gcagcttccg cacgagcctc gttctcttcc tggcgttcga tggcttctgc
     3421 caccacttcg ttttgctctt ccagacggat ctgcagctca tcgagatccg cttcgtagcg
     3481 ttcgatcttc tcctgctgac gcagtgcggt ttgcaccagg ttcaggtgat cgctggccgc
     3541 ctgataatcc gcttccagat cgccttcggc accgttgtgc tctgccagct cacgcgccat
     3601 atcgacgtgt ttgtactgct ccgccgccag ttgctgacgc gaagtatgta gctcgcgacg
     3661 aaactccagg gccttatcga gatggacacg gcgctcgttg gcgtgacgca tgtagtccgc
     3721 cgccacgtag ttggtggctt cgctgatcag atgcttaaac aggtcgcggt ccgactgggt
     3781 gacacgaatc gcttccagcg tcatgcggtt ttcgcgcagc gccgcttcca tgtcctggaa
     3841 cgctttccgc acgccgctgt tttccggcaa caggtagtcg cgcagagaac gggtaatggc
     3901 actggagatc ccgccgtaca gcgaagcttc gatcagacga tagaatttgc tacggtcaga
     3961 tgcggagcgc agacgacgcg cgatgatacc cagatcgaac atcagcgagt ggtaatcggt
     4021 aatggagttg aactgtttaa actgcacgcc ttccatcgcc tcgagcttgt ctttcagctc
     4081 gttaagcggc agcacgcgcg cctggcgttc gttcagagtt tcggtcacca gctgtgtcgg
     4141 ctgcaccgac atcggcagtc cctgaatggc aaacggcttg atatccactt tacgatcgcg
     4201 tccggcaacc tgttgcagac gcacaccgac caccacgcgc tggtggcgcg agttaatggt
     4261 gtcgagcatc gaataacaga cacccgcttt cagcttaccg tgcaggcctt tatcgcgcga
     4321 accgctggtg gccccggctt ccgtggtgtt acggaagtgc agcaaggtca gatcgggaat
     4381 gagcgccgta acgaacgccg ccatcgtggt ggatttaccc gccccgttac cgccggaaag
     4441 cgtcgtgacc agctcgtcaa ggtcaaaagt tcgggcaaaa aagccgttcc agttaatcag
     4501 cgtcagtgag cgaaatttac cgcgttcaat cattattctt cctctccgct atctggctga
     4561 ctctcttcgg tttcatcgtt gagttgcaga tgattttcaa tcggcattgc ttcgccatca
     4621 cgaatcaggc gacgctgtgc ttcacgggga tcgtcgccag cacgcacatc ggctccgaag
     4681 cggaacaccg attcggtaat gcggaacttg ctgctgtcgt ggcccataaa ccacaccatg
     4741 cctaaacgac gcagacggtt gagcgaagaa cgtactttct cctgcaactt ctgacggtca
     4801 acgtctgaac cggttgaacg gttgttcacc agtttcagca gtttcgcttc atcggccagg
     4861 gtgagcagtt cgtcgtacag ttcctgctgg gtgaaaatcc cctcattcgc cagccgttcc
     4921 gggctgagat agagataaca gaggattttc ccgaccatca tatccagttc cgacaagacg
     4981 gaacgcggga taagagtggt ggaacgtggg cgtaaataga agaacccttc cggtgcgcga
     5041 ataagctcaa cgttataacg cgcgtaaaac tcttccagat attcctgaaa atccatcagg
     5101 aatgcatgat tatccagttc gtcgaggcca atatggcggc ctgaacgtaa ggcgctgtcc
     5161 agcgccggaa ataacggatt cgccagcgcc tgcgccagct taaccggcat cacttgttca
     5221 atatttgtcg atgacatgcg cctgtacctt ggctccgtaa tcattaatcg gctgccattt
     5281 cgctggcagt ccggtgaaat ctgcttgcgc tacgccaaga cgtaccgcct gatcaataac
     5341 aatacgcgca acgtcaaagt gacgtgcacg cggatactgt gacagatatt cgcgtaccac
     5401 cagaccaaga tccagcggca cttgtctggt tttgtacacg gcaagttgtt cttcgatgat
     5461 cgccgtcagc tgttcgcgga tctcgttaaa ctcttcgtat tctaaatctg gcggaagttc
     5521 cccagtcact tcttcatcgc gcagtgccat ctcttcgtca cgcatatcca gcagacgatc
     5581 ggcattggca taagttagcg cccacggctc atcaaaatag gtttgtaccg actgacgtaa
     5641 acgctgggca aagacgcggt ttttatccat atcgatcgca gtacgaataa atttgtgtac
     5701 gtggcgatcg tagccaatcc acaagtcgat ggattgctgg ccccagctga taatacggtc
     5761 aagtttgctc tgcagatcga acaccagacg atcgacaaaa tgcagatcgt catgggtcat
     5821 cgtcgcatcc tgaatgcgta acaggttggc ctgcaattta tcgcctgccg cttccagcgt
     5881 atcctgcaat tcacgcagcg tgccggaagt ttctgaaagc aacaattcac agttggaaat
     5941 cgccgcccgc cagtctttgt tcaacaactg ggcgatatca tccttcacct gctgctgctg
     6001 ttcatccatc agacgttgcg tcaggtcgat actgtcgaaa atttctgcta ccgaatattt
     6061 cagtggcgca taaacattac ggtgccagtg aaattcatca ccgccctctt cggcggcatc
     6121 tgctgcgcgt ttgagctcac ccgccacaat cgacaactgc atagaaaggc gcagcgtaga
     6181 aaactcgcgc tgacgaatgt aatagtcagt gatgccaatg ccgagcggcg tcaaacggta
     6241 aattgcgttc ccttccgcct gctcgctggt aaagcggttc agcagacgtt gacgcaccat
     6301 gtcgttgatc gcgttgttgg cgcgcacgcc gatggtttcg ctggtttgct caaacgcatc
     6361 actcacatgg cggaatgcat ccaccagctc gccttcactc atctcaccat ccagacgctc
     6421 gccgttcagc gtggcaaccg ccagcagaaa agagagtcgg tctaccggca gcgagatgga
     6481 gaagtcattt tttctggccc aggcaaccag ttcggggact gtctgggaaa attcactcat
     6541 actttatcct tgctctgcgg tttgcgcgcg gtgacatgaa tataacgccc cagggtaata
     6601 tacggttcct gacggcaata acgcgtttct aattcaagta atgcttcata gcagtcgcgc
     6661 tgctggtgct tctcgcgcag ataatcatga aacacgcgaa cgcctgtctt acccataatt
     6721 tgccaaccag cttcttccag ccacagataa acctgcgccg ggtcgcgtgg ataatctggc
     6781 gaaagcgtcc gttttttctt tttcggcatt cccgcctgca cgtaatcaaa attcccggcg
     6841 accatgttat gcatcagcaa gccgtgcgca ttgtagaaca ttaacgacaa cacaccgcct
     6901 ggacgcaaca ctaaccacag ggtctgtaat acgctgcggg gatcggccac ccactcgagc
     6961 accgcatgga acaatatcag atcaacgggc gtttccaaat gcgaagcaac atcctgagcg
     7021 gcgcaatgta taaattgcat gttgtcgctc acaccttttt cttctgccgc ctgttttgcg
     7081 cggtcgatca tctgcgcaga aagatcgcat aaaatgacct gatgcccgcg ctcggccatt
     7141 ttgattgcgg tctgcccttc accaccgcca gcatccagca cacgcagttt ttgcgggccc
     7201 atttccgcca gcacgcgatc gagatcctgc cacagaatag cctgtcgaag ctgccctttg
     7261 gtggtgccgt aaatgttacg ggaaaacttt tccgcaatat catcaaaatt gcgatcctgc
     7321 attgctttct ccaccggttg gctaagacgt tttctgataa agacgctatt ttgtcacagc
     7381 cacggcgaga atgaacccgt ctggtgtaat atcgctggcg atcccttgct atatggttaa
     7441 aaaaggaacc agaaaggatg ctttttacac tgaaaaaagt gattggcaat atgttgctgc
     7501 cacttccgct gatgttgtta attattggcg ttggcctggc gctgctgtgg tttagccgtt
     7561 ttcaaaaaac cgggaagatt tttattagca ttgggtggcc ggcactcttg ttattgagtt
     7621 tgcaaccggt agccgaccgc ctgctgcgtc ccatcgaaag cacctatccg acatggaata
     7681 attcgcaaaa agtggactat atcgtggtgc tcggaggtgg ttatacctgg aacccgcagt
     7741 gggcaccgag ctctaattta atcaataaca gtctgccacg cctgaatgaa ggtattcgct
     7801 tatggcgcga aaatccggga tcaaaactga tcttcacggg aggcgtagca aaaaccaata
     7861 cggtgagtac agcggaagta ggtgccagag ttgcgcaatc gctgggcgtg ccgcacgagc
     7921 aaattatcac cctggatttg ccaaaagata ccgaagaaga agctgcggca gtgaaacagg
     7981 cgattggtga cgcccctttc ctgctggtga cctccgcatc acatctgccg cgggcgatga
     8041 tcttttttca gcaggaaggg ttaaatccgc taccagcccc ggcgaatcag ttggccatcg
     8101 actcgccgct taacccgtgg gaacgggcaa tcccttctcc ggtctggttg atgcatagcg
     8161 atcgtgttgg ctatgaaacg cttggccgca tctggcagtg gctgaaaggt ccgtcaggcg
     8221 agccacggca agagtgattt tgatgccaga tcgaagttgc accgactaaa tcgtccggta
     8281 ttaaccagtt gcgcaacttc atcccataac acatacaacc aacgccgcca gatgaacgac
     8341 tccgccactg gcgcgcgttg caggtaactc cagagcaaat cttccgccag agaattatcc
     8401 attagtcgga acagttcgta ttctcgcggt gcccaaagca ttaatcccgg cccgaccatc
     8461 gccagtaact gatcgctgcg cgaatctttc agcatgctgc gtaaacagaa gttaccgtga
     8521 atcaacacac aattgtcgtt aaagccttca aataatgccg ggagacattc gcgagtgcga
     8581 aacaggatcc gcttatcctg catcgtcaga ccggtgttat tgaactgatt gagcgtggtc
     8641 catagcactt caacatgttg ccggtaccat gagggccaga aattttcctg agtattgtcg
     8701 accgcgccga cgcaaccgcg actgtcctga cggtgccagg ccagtaaggc ttcaacgatt
     8761 tggtctttga gttgttccca gcgttctggt gttcgggctg gtgcctccac cgaaacacca
     8821 cgcatccgct ccagtagcag gacatcgggg ccggggtgtt cttcatgcgt catcacacca
     8881 taaatagtcg gcatacggac agtcccactt cttgccagca tggtggtttt ccatgccagt
     8941 tgtcgggctt ttccgggcgt actaaagctt cttgccatta acggcattgg gtttccctgg
     9001 ctgtcataca aagcccacaa cgccgtatcc gctttttcat tgacgcactc aatacgactg
     9061 agtttttcgc ccagtaaatg gcttaattcg gcacgcagct gttccattca gattaccctc
     9121 ataaaagcta ctgctttcat aatgagcgtc aatataaaag atgtcacctg aatgagatca
     9181 attgttgaaa agaaaaattg aggaaaatcg taacggtacg acactcctcc caaaattggc
     9241 tgaagtgtcg tgaagtgaaa ttagcgcatt tcagcgcgaa cgcgctcaag atcttcaggg
     9301 gtatccacac ctgtgccagg aacttcctga gcaacagcaa catggatttt ttcgccgaac
     9361 cacagaacac gaagctgctc taacatttcg atgtgttcta acggacttgg ctgccagttg
     9421 acgtaacgac ggataaagcc tgcacggtag ccataaatac caagatgacg caggaagtta
     9481 tcgccaacgg tttcaaggcc ttctgcaaaa cgatcacgat cccacggaat ggtggcgcga
     9541 gagaagtaca gtgcataccc ttcagcgtcg agaaccactt tcaccgcatt cgggttaaac
     9601 gcttcttccg cattgtggat tggcaccgcc agagtcgcca tacccacctg acgctgagcg
     9661 aggttatcag caacctgacg aatgattgtc gcagggatca tcggttcatc accctgcaca
     9721 ttaacgatca ccgtgtcgtc gctgaatgcg catttttcga caacttccgc cagacgttct
     9781 gttcctgact gatgatcggc gcgcgtcata catacttcac cgccagcggc ttcaacggcg
     9841 cgggcaacat cctcatgatc ggttgccacg atgatgcgct cggcacctga ttcacgcgcg
     9901 cgttcaagaa catgaacaat catgggtttg ccgttaatat caaccaatgg tttaccgggc
     9961 agacgcgtgg acgcgtagcg cgcgggaata atgaccacaa aactcatgat ttactctcat
    10021 cagcagtcag cacgcgggct tccgtttcca gcaacactgg aatgccatca cgcagcggga
    10081 aagcgaggtt gtccagtttg caaataagtt cttgtttttc ctggttatac caaagttttc
    10141 cgttgcaaac cgggcaggca atgatttcaa gcagacgatg atccatagtt cctccagatg
    10201 gatcgggtta tgaatgcata aatcttatca taatcattta tgcgacgggg tctatttccc
    10261 agccggtgcg gcaatccgta aagagacctt gcgggcagtg tcctaatgtc acccgcgttg
    10321 cctgctgcca gttagcgaaa tcagtaatcg cctgacgtaa ccctttttgc agcgttgtcg
    10381 ttggtttaat accttcctgt aaccacagag agataacttc aaggatgcct gtctggcgat
    10441 gcattttggc atctattcgc ccaactaatt gcccacgatg taataacggc agaacaaaat
    10501 agccatactg gcgtttcggc gctggggtat agcactctag ccggtagcta aaatcaaaaa
    10561 gctgctctgc gcgtttgcga tcccagacaa caggatcaaa aggcgaaagt accgcgctgt
    10621 gcgttgcagt gagctttccg gccagcgcac gctcgagtag cggcagcaaa tcagcatgca
    10681 gccaaagatt gcccaatttt tcaacatgca cagcaatgat ttgctgctgt tcagccctcg
    10741 cttcacgcca cgccgccagt gccggacgtt tcagccgata gtaatctgcc agccactgtt
    10801 cgcggaatat tcccaggcta cgcgcactgt tatccagcat gatgatttct gcttctgttt
    10861 gcgaaacgag atcacgctca tcatcccagt caggcatgac acggtgggtt aaatcataaa
    10921 cgcgctggaa gttgcgccgt tcaatcacca tcacctttcc ggcagtaaat aaaccttcca
    10981 gatgccgttt atgcggcttc cgttcccacc agccgcttgc acctttacga ggatgctcaa
    11041 aatcggctga acgtaccggc cccttatcat gaatatgctg aattaactgt gcaatttccg
    11101 cctcatgttc ctgcatccag gcgtctttgt atttccagcc cattttttca ggtgccagca
    11161 tgcggtggcg aataagacga aagtcgctac gcggcataaa gcaggcttca tgcgcccagt
    11221 attccattaa ttcgccacgc gccagagact catccagcca ctgggcagga taatttccca
    11281 gacgactgaa aagcaccaga tatgggctac gggcaacaat attgatggta tcgatttgca
    11341 gcaaggacat gcgggagatc gttgccggaa tatcctccaa cgacgctcga cggcggggtt
    11401 tgtttaacag gccttgcgcg gcaaggtgaa gattacgcgc atcagcaagg gagaggtgcg
    11461 gcagcgacat tcatgactcc atcaattgaa cgctgccgcg gcgtaactag ttgccagaag
    11521 ccagcgaggt tagttgcgca agcagtttcg ctggttcatc acctgaaagc tgtgcgtcaa
    11581 cgggcaaata ccaccaattt tcttctgcaa aggcccggca tttcaccgca tctttttcag
    11641 tcattaccag cgtttgcccg gtgcttacca acgcgctgac atccgcatgg ttcaaagact
    11701 gatgatcggc cagcggtaca catttttccg gttgtacgcc gcacatcttc agcgtggcaa
    11761 aaaagcgcgg cggatgccca atccctgcca tcgccaccac atgttcaagc tgagcaacgt
    11821 cacaacgcgt accggtacgt aaattcaccg cctgacccgg cagcagatgc atggggattt
    11881 caccgctgcg ggggacaccg ccgttgacga ttaccgcatc aactgacttt aagcgccccg
    11941 ctcgctcacg cattggcccc gccggcaacc accagccatt gccaaagcga cgcacaccat
    12001 caataacgac gatttccaca tcatgcgcca gacggtaatg ctgtaaaccg tcgtcggtta
    12061 cgatgatctg cacatcaggg tgttgcgcca gaatggcttt taccgcatca gaacgcacgg
    12121 gagaaaccgc aacaggcgca tcagtgcgtt gataaatcaa cacaggttca tcacccgcct
    12181 gtgctgtggt ggtatctgcc gacaataaca gcggataaga ttcagcctta ccaccatatc
    12241 cccgcgatac gacccccacg cgaataccgc gctgttgcaa ctgttccacc agccagacaa
    12301 cgaccggggt ttttccgttg ccgcctgcgg tgagattacc aaccacgaca accggtacgg
    12361 gggcacgcca agcgcgcttc agttttagtt tatagcaaag acggatcacg ccactcacca
    12421 ggccatacaa ccaggagagt ggcagcaata gccgccacaa aggggattca ccagaccaga
    12481 ttttttcgat cattggccaa actgcatttt gtgaagttgc gcgtaaacgc cacggtgctc
    12541 aagcaaatcg ttatgcgtac cgcgttccac aatgacacca tcctcgacga ccacgatttc
    12601 gtctgccttt tcaatggtag acaagcggtg ggcaatcacc agagaggtac ggtttttctg
    12661 caactcatca agtgccgcct gaatcgcacg ttcggattcg gtatccaacg ccgaggtagc
    12721 ttcgtccaga atcagaatcg ggctatcacg caacagggct cgagcgatag caatacgctg
    12781 acgctgaccg ccagagagca gcacgccgtt ttcaccaatc actgtatcga gaccgttatc
    12841 catcttatta atgaagtcca tggcgtaggc catacgcgcc gcttcttcaa tttgctcacg
    12901 gctgtactgt tcagtccgtg cgtaagcaat gttgttagca accgtatcgt taaacagatg
    12961 gacattctgc gacaccagag caacctggtt acgtaacgac gccagggtat actcgcgcag
    13021 atcgtgacca tccatcagga tttcgccttc atcaatatcg taaaaacgcg tgatcaggct
    13081 ggcgatggtt gatttacctg aaccagagcg tccaaccaga gcaacagtct tccctgccgg
    13141 aattttcagg ttgatgttac gcaatgcggg tacgtcacgt cctggataag taaaggtgac
    13201 attgcggaat tccacgtcgc cagtcgcacg ctcgatcacg cgcttacctt cgtctttctc
    13261 ctgctcactg tccagaatgg taaacagcgt ctgacaagcc gccataccgc gctggaactg
    13321 ggcgttaacg ttggtcagcg atttcagtgg acgcatcagt gcaatcattg aagagaaaac
    13381 aacggtaatc gtaccggcag tcaagttatc cataacactt gggaagctcg ccgcatacag
    13441 aacaaacgcc agcgccaaag aggcgatcag ctgaatgatc ggatcagaga tggaagaggc
    13501 tgaaaccatt ttcatcccct gaagacgcat tcggttactg actttatcga agcgtttcgt
    13561 ttccacttcc tgaccaccga aaatcaatac ttctttgtgg cccttcagca tttgttctgc
    13621 actggtggtc acctgcccca tggtgttctg catgttttta ctgatgttgc gaaaacgctt
    13681 cgatacaacg cgaatcgcaa tcgaaacaat cggtgccagc acaatcaaaa tgatcgacag
    13741 ttgccaactg taatagaaca tcatgatgaa caggccgatg attgacgcac cttcacgcac
    13801 aacagtaatc agtgcgccgg aagaagaaga agcaacctgt tcggaatcgt aggtgatacg
    13861 tgacaacagc gtacccgttg actgtttgtc aaagaatgaa actggcattc ccatcatgtg
    13921 accaaacagg cggcgacgca tggtcattac cacctttcct gatacccagg agatacagta
    13981 gctggagaca tagctggtga taccacgtaa aatcatcagc ccgatcacca ccagcggcat
    14041 ccacaccagc acggagcgat ctgttttacc aaagccatca tcaagaagtg gcttaaggag
    14101 cgataacatg aaggtatcgc tggctgcgtt gaggattaac gctacgcccg ccacgatcag
    14161 acccgcttta aaaggcgcaa tggttggcca cagtcggcgg aacgtctgcc acgtagagag
    14221 atctttgtcg ttatgcattc aaaaaaccag catttgttga aatagccgca tattctaccc
    14281 gttatccact ggcacgccaa accactgatg ataccaacga ggtaaaattt gctctctgag
    14341 gctgctaatc cgccagcctt gcgctgaaaa attgaccgtc acttgaccct gatgtggagt
    14401 atcaaaccat tgatatcctt gctgttgata gcgatgctta actttgttag agggcaatcg
    14461 ccatgcgtta tagcgcgatg ccgatgcgag tgccactttt ccattcactc gctgaattaa
    14521 tggcaatgat gatgaggtat tactgccatg gtgaggtacc tgaagcaatg ttgtctgcac
    14581 ttgctgccag taacggctta gcatcttttg ttcagcgggg acttcaatat c
//
LOCUS       DAJVTL010000111        13677 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.113, whole genome shotgun sequence.
ACCESSION   DAJVTL010000111 DAJVTL010000000
VERSION     DAJVTL010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13677
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.113"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            17..1270
                     /gene="kch"
                     /locus_tag="OQQ26_003237"
     CDS             17..1270
                     /gene="kch"
                     /locus_tag="OQQ26_003237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HCS1858595.1"
                     /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
                     LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
                     TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
                     LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
                     SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
                     EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKD
                     MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
                     NSGHGIFSDNDEQETKADSKESAQK"
     gene            complement(1325..1498)
                     /locus_tag="OQQ26_003238"
     CDS             complement(1325..1498)
                     /locus_tag="OQQ26_003238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HCS1858596.1"
                     /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN
                     KQRNSLLFAIYNI"
     gene            1641..3101
                     /gene="cls"
                     /locus_tag="OQQ26_003239"
     CDS             1641..3101
                     /gene="cls"
                     /locus_tag="OQQ26_003239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HCS1858597.1"
                     /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
                     LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
                     DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL"
     gene            3136..3465
                     /locus_tag="OQQ26_003240"
     CDS             3136..3465
                     /locus_tag="OQQ26_003240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309775.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HCS1858598.1"
                     /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE
                     RGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL
                     CHIIWRE"
     gene            complement(3518..4522)
                     /gene="oppF"
                     /locus_tag="OQQ26_003241"
     CDS             complement(3518..4522)
                     /gene="oppF"
                     /locus_tag="OQQ26_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HCS1858599.1"
                     /translation="MNAVTEGRKVLLEIAHLKVHFEIKDGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYYPKMSRQEVRERVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQHLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
                     KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            complement(4519..5532)
                     /gene="oppD"
                     /locus_tag="OQQ26_003242"
     CDS             complement(4519..5532)
                     /gene="oppD"
                     /locus_tag="OQQ26_003242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppD"
                     /protein_id="HCS1858600.1"
                     /translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNF
                     SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPERELNKLR
                     AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
                     RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
                     NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
                     AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVE
                     ELL"
     gene            complement(5544..6452)
                     /gene="oppC"
                     /locus_tag="OQQ26_003243"
     CDS             complement(5544..6452)
                     /gene="oppC"
                     /locus_tag="OQQ26_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HCS1858601.1"
                     /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLI
                     VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVCVAIGGR
                     ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
                     GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTPGIVIRHIVPNV
                     LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
                     GFLVVTLFCFNFIGDGLRDALDPKDR"
     gene            complement(6467..7387)
                     /gene="oppB"
                     /locus_tag="OQQ26_003244"
     CDS             complement(6467..7387)
                     /gene="oppB"
                     /locus_tag="OQQ26_003244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HCS1858602.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
                     VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
                     AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW
                     LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            complement(7473..9104)
                     /gene="oppA"
                     /locus_tag="OQQ26_003245"
     CDS             complement(7473..9104)
                     /gene="oppA"
                     /locus_tag="OQQ26_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HCS1858603.1"
                     /translation="MTNITKRSLVADGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
                     NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL
                     RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL
                     GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
                     LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
                     QGDMSAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN
                     TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
     gene            9388..9684
                     /locus_tag="OQQ26_003246"
     CDS             9388..9684
                     /locus_tag="OQQ26_003246"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858604.1"
                     /translation="MRFLLANTFCKIVKQFSFIDRFRIYSLHPCLNKHLSIQSNRDWL
                     SMSIFSDYSSSSEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT"
     gene            complement(9842..10489)
                     /gene="ychE"
                     /locus_tag="OQQ26_003247"
     CDS             complement(9842..10489)
                     /gene="ychE"
                     /locus_tag="OQQ26_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YchE"
                     /protein_id="HCS1858605.1"
                     /translation="MIQTLFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
                     KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
                     ALCCWGLFRMAPWLVRVLRQTCINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
     gene            10966..13641
                     /gene="adhE"
                     /locus_tag="OQQ26_003248"
                     /gene_synonym="adhC"
     CDS             10966..13641
                     /gene="adhE"
                     /locus_tag="OQQ26_003248"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HCS1858606.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFSAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
                     KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
                     KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA"
BASE COUNT         3586 a         3408 c         3192 g         3491 t
ORIGIN      
        1 gggcgcttac gtatcagtga gtcactgggc tacattcaaa caaacagcaa caaatttatg
       61 ggtgacccta cggcacgaca ttctcgcgct ggccgtcttt ttaaatggat tgcttatttt
      121 taaaacaatc tatggtatgt cggtcaattt gcttgatatt ttccatatca aagccttttc
      181 agagttggat ctctccttgc tggcaaacgc cccactcttt atgctcggcg tctttcttgt
      241 cctgaactcc attggcttac tgttccgggc aaaactcgca tgggcaatca gtatcatttt
      301 gttgttgata gcgctaattt acaccctgca tttttatcct tggctgaaat ttagtattgg
      361 attttgcatt tttacgctgg tgtttttgct gatactgcgc aaagacttct cccacagtag
      421 cgccgcagcc gggacaattt tcgcatttat tagtttcacg acgttactgt tttactccac
      481 ctacggtgcg ctttatttaa gcgaaggttt taatccgcga atagaaagtt tgatgaccgc
      541 gttctatttt tcgatagaaa ccatgtcaac cgtcggctat ggcgatattg tccctgtttc
      601 tgaatcagca cgattgttca ctatttcggt cattatttcc ggcattaccg tttttgccac
      661 ctccatgacc tcaatttttg gtccgcttat ccgcggggga ttcaacaaac ttgtaaaagg
      721 aaacaatcat acaatgcatc gtaaagatca ttttattgtt tgcggacatt cgattctcgc
      781 catcaatacg attctgcaac tgaatcaacg cggacaaaac gtaacggtta tcagcaactt
      841 gcctgaagat gatatcaagc aacttgagca acgcttaggc gataacgctg atgttatccc
      901 cggtgacagt aatgacagtt cagtattaaa gaaagcggga atcgatcgat gccgggccat
      961 tctggcgctg agtgataacg atgcagataa cgcgtttgtt gtactctcgg caaaagatat
     1021 gagcagtgat gtcaaaacag ttctcgccgt cagtgatagc aaaaacctga ataagattaa
     1081 gatggtacat ccggatatca ttctctcacc gcaactgttt ggcagcgaaa ttctggcgcg
     1141 agttttaaat ggtgaagaga ttaataatga tatgctcgtt tcaatgttgt tgaactccgg
     1201 tcatggcatt ttcagcgata acgatgaaca agaaacgaaa gctgacagta aagaatcggc
     1261 gcaaaaatag agtttaaaga cgaaagagta aacttattgg gcaccgcaat ggtgcccagt
     1321 acatttagat attgtagatc gcaaacaata acgagttacg ctgtttgttt agaatgcact
     1381 tcctgatgct gtggatacgc atatttcggc gcgactgccc ctcaagccaa cgcgatttac
     1441 gtcggctagc ctgacgctgc atgcgccagc gccccacttc cgttctactc cgcttcatgt
     1501 taactactct atgcaataac agaatggtca ttataccccc gcccccgacg ctgaccagtg
     1561 cttttcccgc gtttttattt gccagatgaa tccatatgcg taaactcata acaatgcgct
     1621 ttcaaaagga tttctaatct atgacaaccg tttatacgtt ggtgagttgg ttggccattc
     1681 tgggatactg gttgctcatt gcaggcgtaa ctttacgcat tctaatgaaa cgacgcgcag
     1741 ttccctccgc gatggcctgg ctgttgatta tttacattct gccgttagtc ggaattattg
     1801 cctatcttgc cgttggcgag ctccatttag gcaaacgccg cgctgagcgc gccagagcga
     1861 tgtggccttc caccgcaaaa tggcttaacg accttaaagc ctgtaagcat atcttcgccg
     1921 aagaaaatag cagtgtcgct gcgccattat tcaagctttg cgagcgtcgt caggggatcg
     1981 ctggggtcaa agggaatcag ctacaactga tgaccgagtc agatgatgtg atgcaggcgt
     2041 taatccgcga catccagctc gcgcgccata atattgagat ggtgttttat atctggcagc
     2101 ccggcggcat ggcggaccag gtggctgaat cattaatggc cgctgcgcga cgcggcattc
     2161 attgccgatt gatgctcgac tccgccggga gtgtggcttt tttccgcagc ccgtggcccg
     2221 agctaatgcg taatgccggt attgaagtgg tcgaagcctt aaaggtcaat ctgatgcgtg
     2281 tgtttttacg ccgtatggac ctgcgccaac atcgcaagat gatcatgatc gataattaca
     2341 tcgcgtacac cggcagcatg aatatggtcg atcctcgcta cttcaaacaa gatgcgggcg
     2401 tagggcaatg gattgatctg atggcgcgta tggaaggccc catcgccacc gcgatgggga
     2461 ttatttattc ctgcgactgg gagattgaaa cagggaaacg tattctaccg ccaccaccag
     2521 atgtcaatat tatgccgttt gaacaggcca gcggtcatac cattcacaca attgcttctg
     2581 gccccggctt tccggaagat ctcattcacc aggcattatt gactgcggct tattcggcgc
     2641 gtgaatattt gatcatgaca acgccctact ttgtgccaag cgatgattta cttcatgcga
     2701 tttgcacggc ggcgcagcgc ggggtggatg tcagtattat ccttccgcga aaaaatgact
     2761 cgatgctggt cggctgggcc agtcgcgcat tctttacgga actgctggct gctggggtta
     2821 aaatttatca gtttgaaggc gggttactgc ataccaagag cgtgctggtc gatggcgaac
     2881 taagtctggt tggcaccgtt aaccttgata tgcgaagtct gtggctaaat ttcgaaatta
     2941 ccctggcaat cgacgataaa ggttttggtg cagaccttgc cgccgttcag gacgattata
     3001 tttcgcgttc acgtctgctc gatgcccgtt tatggctaaa acgtccatta tggcaacgtg
     3061 tcgccgagcg actgttttac ttcttcagcc cgttgctgta aaacgtcgcc aacagaggtt
     3121 aaacaggtag tgactatgga tatggatcta aacaatcgcc tgactgaaga tgaaacgctt
     3181 gagcaggcct acgatatttt tctcgaactg gctgccgaca atctcgatcc agctgatgtt
     3241 ctgctgttca atcttcagtt tgaagagcgc ggcggcgcgg agttattcga tccggtggaa
     3301 gactggcagg aacatgttga tttcgatttg aacccagact tttttgccga agtggtgatt
     3361 ggtctggcgg acagtgaaga tggtgaaatc aacgatgttt tcgcccgcat tctgttatgc
     3421 cgcgaaaaag atcacaaact ttgccatatc atctggcggg aataaataat cgctttcggc
     3481 gtgaaaaagg gctgacaact gtcagccctt attgtgttta aagcggatcg actttcaggc
     3541 aagaaacggc gtgtctgaaa ctcccctcca gcacaggacg tgttttggca cactccggac
     3601 cggcaatcgg gcaacgggta cggaaaacac aaccggaagg cgggttgatc ggcgacggta
     3661 attccccttc cagtaactgg atggttttgt tcttctccag atccggatca ggtatgggga
     3721 ctgccgacat caatgccctg gtgtaaggat gtagtggatt gtggtagacc tcatcatagg
     3781 tccccagttc taccgcatgg ccgagataca tcaccaacac acgatcggaa atgtgtttta
     3841 ccacagccag gtcatgagcg ataaaaatta atgacaatcc catctcacgt tgcagatgct
     3901 ggagcaggtt gaccacctgc gcctgaattg acacgtccag cgccgaaacc ggctcatcac
     3961 agataatcag cttcggttca agaataagag cacgagcaat cccgatacgc tggcactgcc
     4021 caccggagaa ctcatgcgga tagcggttaa tcaggttagg caataacccg actttcagca
     4081 tcatcgcctt cacgcgctcg cgaacttcct ggcgtgacat tttcggataa taagtacgca
     4141 gtggttcagc gatgatctcg ccgatggtca tacgcgggtt tagcgatgcc aacggatcct
     4201 ggaaaatcat ctgaatatca ctgcgaacgg cacgccattc atcgggcttc atgcccagca
     4261 actctttacc taaccaggca acatgaccgt cggtcgcttt aaccaggcca atgatggcgc
     4321 gagcaaaggt ggacttaccg catcccgatt cccctaccac acctaatgtt tccccttcat
     4381 acaggcgaag agttacacca tcgacggctt tgagagtttt cggcggttgc cagaaccact
     4441 gtttgccatc tttgatttca aagtgcactt tcagatgggc gatttcgagg aggacttttc
     4501 ttccttcggt tacagcattc ataacagttc ctccaccggt ttaaagcaag cacgcagacg
     4561 gccaggtgta aactcttcca gcggcggtgc gctactacaa atttccatcg catgcggaca
     4621 acgtggctgg aacgggcaac ctttcggtaa tcgcagcagg tttggcggat tacccggaat
     4681 agtcaacatt gtttcacctt ccgcatcgag acgcggcacc gcgttgagca aaccgataga
     4741 ataaggatga acgggttgat aaaagacatc gcgcgcgttg ccatattcca tcgtgcgccc
     4801 ggcgtacatt accagcactt tgtcacagat ccccgccacc acgccaagat cgtgggtgat
     4861 cataatgatg gcggtattaa attcccgctt cagttcattc aatagcgtca tgatctgcgc
     4921 ctgtacggtg acgtccagcg cagtagtggg ttcatccgca atcagcagct taggtcgaca
     4981 taacaatgcc atcgcaatca tgactcgctg acgcatgccg ccagaaaact cgtgcgggta
     5041 cattttcatg cgtttacgtg cttccggcat ttttaccgca tcgagcatcc gcaccgactc
     5101 ttcaaacgcc tcagctttgc tcatgttctt atgcagcatc agcacttcca tcaactgctc
     5161 accgacgcgc atatagggat tcaacgaagt cattgggtcc tgaaaaatca ttgagatttg
     5221 ttcagcgcgc agtttattga gttcacgctc tggcaaattg aggatttcac gcccattgaa
     5281 ggttgccgat ccgccaatac gtccgttggc agccaacagg cccatcaacg caaatgcagt
     5341 ttgcgattta cccgaaccag actcacctac aatgcccaac gtttctccgg cacgtaggga
     5401 aaaatttaaa tcattgaccg ccgtgacgtc gccgtccggg gtactaaagg tgacacgcaa
     5461 atctttcacg ttcagcagtg cgtcagcctg ttgttgtgcg agcggcacag ttgcagtttc
     5521 aattacgctc atggctgcac tccttaacga tctttcgggt cgagggcatc acgcaagcca
     5581 tcgccgataa agttgaaaca aaacagcgtc accacgagga atcccgctgg gaacaacagt
     5641 aaccatggag agacttccat cgagttcgcg ccatcactca gcaatgcccc ccagctgctt
     5701 aacggctctt gcgtacccaa ccccaggaag ctaaggaaag attcaaagag gatcatgctg
     5761 ggcaccagta gcgatgcgta gaccaccacc acaccgagta cgttcggcac aatgtggcga
     5821 ataacaatgc ccggcgtcga tacaccgcca acttgtgccg cctcaataaa ctctttgcgc
     5881 ttcagactca gggtttgccc acgcacaata cgagccatat ccagccagga aaccatgcca
     5941 atcgccacga aaatcagcag gatgttttgg ccgaaaaagg tcaccagcaa aatgacgaag
     6001 aacatgaatg ggaaggagtt gaggatttcc agcagacgca tcattaccga atccacttta
     6061 ccgcccagat aaccggaaag cgaaccataa agtgtcccca caaccactgc caccagtgcc
     6121 gcagcaacac cgaccatgag tgagatacgc ccgccaatcg caacgcacac aagcaggtcg
     6181 cgaccggatg agtcagtacc aaagtagtga ccggactcca tatccggggc gctggacatc
     6241 atcgcccagt cagtatcgtc ataggcaaac tgcgaaagca tcggtgccag gattacaaat
     6301 aacgcgatca gcaccagcac tatcagactg gcaaccgccg cacggttatg cataaaacgt
     6361 cgacgtgcgt cctgccacaa gctgcgccct tcgacctcca gcttttcact gaaattttcc
     6421 agcgtctcgc tgtttttctt acttaacatc atcgcgagct ccagtatcag taacggattt
     6481 tcgggtcgat aaccgcatat agcacatcga caatggcatt aaacaaaatg gttaaagcac
     6541 caaccaggat ggtcaggctt aacactaagg aatagtcacg gttcaatgcg ccattaacga
     6601 acagttgccc aatccccggc aaaccataaa tggtttcgat gaccatagaa ccggtaataa
     6661 tgccgacaaa tgcggggccc atataggaga gcacgggtaa cagagcaggt tttaatgcgt
     6721 ggcgtaaaat gatccgccgc ataggtaacc ctttcgcccg ggcagtacga ataaagttgg
     6781 agtgtaatac ttcaatcata gagccacggg taatacgcgc aatactggcg atataagcga
     6841 gtgacaacgc caccatcggc aatatcatga atttaagcgc cccaccattc cagccaccgc
     6901 ccggcagcca atgcaaaatg atcgcaaata tcatgactaa taatggtgca accacaaaac
     6961 tggggataac aaccccggtc attgccagcc ccatcacggt atagtcccat ttggtgtttt
     7021 gttttaatgc ggcaataacg ccagcactaa cacctagtat taccgcaagg aaaaatgctg
     7081 cggctcccag tttggcagaa acgggaaaac tggatgcaac caagtcattg accgaataat
     7141 ctttatattt aaacgatgga ccgaaatcac cgtgcgccag ttgtttcagg tagctgaaat
     7201 actgtgtcat gatcggatca ttaagatgat atttcgcttc gatattggcc atcacttctg
     7261 gcggtaaagt acgttcgccg gtaaaagggc ttcccggcgc gaggcgcatc ataaagaacg
     7321 aaatagtaat aagaataaat agcgtcggaa tcgcttccag acagcgacgt agaataaatt
     7381 ttaacattgc cctaccttct ggcctgtgcc ttctgtaatg cgataaaaat cagacaccgt
     7441 ggagcaggac actcctaccc cacgtattgc cattagtgct tcacaatgta catattccgg
     7501 gtataggtat tatccagcgg atctttgccg gtatagccac caacccacgg tttcaccaga
     7561 cgcgcattca cgtagtaata aacaggaaca atggccgaat ccttatccaa ctgttgttct
     7621 gctttagtgt acagagctgt gcgctgcgcc tcgtcagtca ctttcagcgt ttccgccata
     7681 atgctgtcaa aggccgggct cttataatgc gcggtattca tcgagctgtt cgaaagcatg
     7741 gtgttcagga aggaagttgg ttcgttgtag tcagcacacc agcctgcacg ggccacatca
     7801 aaagtaccct ggtgacgggt gtcgaggaac gttttccact cctggttaac cagtttgacg
     7861 tttacaccaa tgtttttctt ccacaatgaa gaggcagcaa tcgccagctt tttatgcaga
     7921 tcggaggtgt tatacaacag gttgatggtc aacggtttgt ctgcggtata acccgcttca
     7981 gccagcagtt ttttcgcttc ttcgttacgt ttttcctggc tccagccaaa ccattccggc
     8041 tgagtcaatt ttgcgccatc agtatacggt ggagtgtaac cataggcgga catgtcgccc
     8101 tgcgctttca ctttattaac aatgatatcg cggtccatac ccagtttcag tgcggtacgc
     8161 acacgcacat cgttgaatgg cggtttctgg ttgttaattt cgtaatagta agtgcacagg
     8221 tatggatcaa cgtggacttc gtccgggatc tcttttttca gcttctggaa caattcgatc
     8281 ggcatgttgt tatacgtcat gtcgatttca ccactacggt agcggttgac atcggtaact
     8341 tcagaagcaa taggtaaata ggttacctgg ttaataacgg ttttcgcgtt gttccagtag
     8401 gtcgggctgc gttcaagaac gattcgttcg tttacgaccc aatcttttaa ggtataggca
     8461 ccgttggtga cgatattacc aggctgggtc catttttcgc cgaatttctc gatagcggct
     8521 tttggcaccg gtgaagttga tgggtgaaca agtaatttat agaagtacgg aacgggttca
     8581 cttaaggtga cttctaatgt gtgatcatca atagctttca cgccgagatc ggtaatcggt
     8641 tttttccctt caagaatttc atcaataccg gcgatatgcc catattgcag ataactggca
     8701 tacggagaag cggtgttcgg atcaacagaa cgttgccagc tatacacaaa gtcttgtgct
     8761 gtgactggcg tgccatcaga ccatttcgca tctttacgca aatggaaggt ccagactttc
     8821 gcgtctttat tatcccagga ttcagcgacg ccaggtgccg gatggccgtc aagatcgctg
     8881 accagtaagc cttcaaacag gtctcggctg atattagact ccggaacacc ttcaattttg
     8941 tgcggatcta atgactgaac ttctgaacca ttgttacgta ccagcgtttg tttttccgcc
     9001 agtgtgacgc ctgcgggtac atcagctgcc agcgcgacat tccctgccat tagcgcagcc
     9061 agaacgccat ctgctactaa acttctcttg gtgatgttgg tcattgtttt ttggactccc
     9121 tcattataat tactggtatt aaccagcatg tgtaatcccg gattgggacc ctgcacaggc
     9181 tcggagactt tctgctgtca ggttacttta tcgttacgga ttgctatcac cgactttatt
     9241 tattctggtg attcagacga tcaccttatg tcgattcgta ctgtgtctcc cctgtcgaga
     9301 cacattattc tttcgcgacg ctctttaatt gttaattatt ctcattacca ataaagaatc
     9361 gcctggcggt tgcccggaaa gtaccaaatg cgcttcttac tcgccaatac attttgcaaa
     9421 attgttaagc aattctcctt tattgaccgc ttcagaatct atagcttaca tccatgtctt
     9481 aacaaacatc tttcaattca atcaaataga gattggttaa gcatgtctat cttttctgat
     9541 tacagttcca gtagtgaaat gcacaataat ttaacaattg attattattt agcactttcc
     9601 tctaccaaag gcagtgggat tactaatatc atttcaatta ttcttcagca agcccaggat
     9661 tatgatgtgg cgaaaataac atgatggtga ggagaagcag ttaaggaaat ccttataact
     9721 aactgtaatt tgagaagaat atttttacct attccttttg cttttgataa ctgcgcggga
     9781 acaaagtaaa aataatgacg aagtaaacgg agcatgacag ctccgtttca tttgaaagga
     9841 attaattaag caggccgggg aaaatcccct taataccagt aacgataaat tcaatcccca
     9901 atgccatcag caatagcccc ataatacgcg taatcacgtt gatgcaggtc tggcgtaaaa
     9961 cccgtaccag ccacggtgcc atgcggaaca atccccagca acataaagcg aacaatgcaa
    10021 tagccacaaa gaaaccaaac agatagctaa tgctgtgata acgcgtcccc cagacgatgg
    10081 tagaactgat cgcccctggc cccgccatca acggcaacgc caatggcacc acaccaatgc
    10141 tttcacgcac cgcggtttct gatttttctt gcttgttctg tttatcctct ccaagcttgc
    10201 cgctgatcat cgacatcgct atcgtcacca ccaggatgcc cccggcgata cggaacgaat
    10261 caattgatat accaaaaagt tgtagaatcg tgtcgccgag aaaaagcgag atccacaaga
    10321 taatggccac agacaggttg gctgtaaggt tagttttgtt tcgcgctgcc gctgtctgat
    10381 aactggtcat gctgataaag acgggaataa tccctaccgg gttgaccagc gcaaataacc
    10441 cgatgaaaaa tttgaagtaa acgggaaaat caaaaagggt ctgaatcacg gttagctccg
    10501 aagcaaaagc cggataatgt tagccataaa taaggttgaa aagacgcgct gacaatacgc
    10561 cttttgacag catttttcac ctcctaacta cttaaaattg ctatcattcg ttattgttat
    10621 ctggttgtgc aaaacatgct aatgtagcca acaaatcata ctacaattta ttaactgtta
    10681 gctataatgg cgaaaagcga tgctgaaagg tgtcagcttt gcaaaaattt gatttggatc
    10741 acgtaatcag tacccagaag tgagtaatct tgcttacgcc acctggaagt gacgcattag
    10801 agataataac tttaatgttt aaactctttt agtaaatcac agtgagtgtg agcgcgagta
    10861 agcttttgat tttcatcggt taagcaaatc atcaccgcac tgactatact ctcgtattcg
    10921 agcagatgat ttactaaaaa agtttaacat tatcaggaga gcattatggc tgttactaat
    10981 gtcgctgaac ttaacgcact cgtagagcgt gtaaaaaaag cccagcgtga atatgccagt
    11041 ttcactcaag agcaagtaga caaaatcttc agcgccgccg ctctggctgc tgcagatgct
    11101 cgaatcccac tcgcgaaaat ggccgttgcc gaatccggca tgggtatcgt cgaagataaa
    11161 gtgatcaaaa accactttgc ttctgaatat atctacaacg cctataaaga tgaaaaaacc
    11221 tgtggtgttc tgtctgaaga cgacactttt ggtaccatca ctatcgctga accaatcggt
    11281 attatttgcg gtatcgttcc gaccactaac ccgacttcaa ctgctatctt caaatcactg
    11341 atcagtctga agacccgtaa cgccattatc ttctccccgc acccgcgtgc aaaagatgca
    11401 accaacaaag cggctgatat cgttctgcag gctgctatcg ctgccggtgc tccgaaagat
    11461 ctgatcggct ggatcgatca accttctgtt gaactgtcta acgcactgat gcaccaccca
    11521 gacatcaacc tgatcctcgc gactggtggt ccgggcatgg ttaaagccgc atacagctcc
    11581 ggtaaaccag ctatcggtgt aggcgcgggt aacactccag ttgttattga tgaaactgct
    11641 gatatcaaac gtgcagttgc atctgtactg atgtccaaaa ccttcgacaa cggcgtaatc
    11701 tgtgcttctg aacagtctgt tgttgttgtt gactctgttt atgacgcagt acgtgaacgt
    11761 ttcgcaaccc acggcggcta tctgttgcag ggtaaagagc tgaaagctgt tcaggacgtt
    11821 atcctgaaaa acggtgcgct gaacgcggct atcgtaggtc agccagccta taaaattgct
    11881 gaactggcag gcttctctgt accagaaaac accaagattc tgatcggtga agtgaccgtt
    11941 gttgatgaaa gcgaaccgtt cgcacatgaa aaactgtccc cgactctggc aatgtaccgc
    12001 gctaaagatt tcgaagacgc ggtagaaaaa gcagagaaac tggttgctat gggtggtatc
    12061 ggtcatacct cttgcctgta cactgaccag gataaccaac cggctcgcgt ttcttacttc
    12121 ggtcagaaaa tgaaaacggc tcgtatcctg attaacaccc cggcttctca gggtggtatc
    12181 ggtgacctgt ataacttcaa actcgcacct tccctgactc tgggttgtgg ttcctggggt
    12241 ggtaactcca tctctgaaaa cgttggtccg aaacacctga tcaacaagaa aaccgttgct
    12301 aagcgagctg aaaacatgtt gtggcacaaa cttccgaaat ctatctactt ccgccgtggc
    12361 tccctgccaa tcgcgctgga tgaagtgatt actgatggcc acaaacgtgc gctcatcgtg
    12421 actgaccgct tcctgttcaa caatggttat gctgatcaga tcacttccgt actgaaagca
    12481 gcaggcgttg aaacagaagt cttcttcgaa gtagaagcgg acccgaccct gagcatcgtt
    12541 cgtaaaggtg cagaactggc aaactccttc aaaccagacg tgattatcgc gctgggtggt
    12601 ggttccccga tggacgccgc gaagatcatg tgggttatgt acgaacatcc ggaaactcac
    12661 ttcgaagagc tggcgctgcg ctttatggat atccgtaaac gtatctacaa gttcccgaaa
    12721 atgggcgtga aagcgaaaat gatcgctgtc accaccactt ctggtacagg ttctgaagtc
    12781 actccgtttg cggttgtaac tgacgacgct actggtcaga aatacccgct ggcggactat
    12841 gcgctgaccc cggatatggc gattgtcgac gccaacctgg ttatggacat gccgaagtcc
    12901 ctgtgtgctt tcggtggtct ggacgcagta actcacgcca tggaagctta tgtttctgta
    12961 ctggcatctg agttctctga tggtcaggct ctgcaggcac tgaaactgct gaaagaatat
    13021 ctgccagcgt cctaccacga agggtctaaa aatccggtag cgcgtgaacg tgttcacagt
    13081 gcagcgacta tcgcgggtat cgcgtttgcg aacgccttcc tgggtgtatg tcactcaatg
    13141 gcacacaaac tgggttccca gttccatatt ccgcacggtc tggcaaacgc cctgctaatt
    13201 tgtaacgtta ttcgctacaa tgcgaacgac aacccgacca agcagactgc attcagccag
    13261 tatgaccgtc cgcaggctcg ccgtcgttat gctgaaattg ccgaccacct gggtctgagc
    13321 gcaccgggcg accgtactgc tgctaagatc gagaaactgc tggcatggct ggaaacgctg
    13381 aaggctgaac tgggtattcc gaaatctatc cgtgaagctg gcgttcagga agcagacttc
    13441 ctggcgaacg tggataaact gtctgaagat gcattcgatg accagtgcac cggcgctaac
    13501 ccgcgttacc cgctgatctc cgagctgaaa cagattctgc tggataccta ctacggtcgt
    13561 gattatgtag aaggtgaaac tgcagcgaaa aaagaagccg ctccggctaa agctgagaaa
    13621 aaagcgaaaa aatccgctta atcagtagcg ctgtctggca acataaacgg ccccttc
//
LOCUS       DAJVTL010000112        13651 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.114, whole genome shotgun sequence.
ACCESSION   DAJVTL010000112 DAJVTL010000000
VERSION     DAJVTL010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13651
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.114"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(39..800)
                     /locus_tag="OQQ26_003249"
                     /pseudo
     CDS             complement(39..800)
                     /locus_tag="OQQ26_003249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(787..1752)
                     /gene="iaaA"
                     /locus_tag="OQQ26_003250"
                     /pseudo
     CDS             complement(787..1752)
                     /gene="iaaA"
                     /locus_tag="OQQ26_003250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415349.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
     gene            1956..3191
                     /gene="moeA"
                     /locus_tag="OQQ26_003251"
     CDS             1956..3191
                     /gene="moeA"
                     /locus_tag="OQQ26_003251"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HCS1858607.1"
                     /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV
                     VSPLDVPGFDNSAMDGYAVRLADIAFGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
                     PVPEGCEAVVTQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE
                     LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
                     EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
                     TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
                     VDVGEWVEVEPFNALFGGL"
     gene            3191..3940
                     /gene="moeB"
                     /locus_tag="OQQ26_003252"
     CDS             3191..3940
                     /gene="moeB"
                     /locus_tag="OQQ26_003252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HCS1858608.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLVVGLGGLGC
                     AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIA
                     ITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKMPLVSGAAIRMEGQ
                     ITVFTYQDGEPCYRCLSRLFGENALTCVETGVMAPLIGVIGSLQAMEAIKLLAGYGKP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            complement(4119..4781)
                     /gene="fsa"
                     /locus_tag="OQQ26_003253"
     CDS             complement(4119..4781)
                     /gene="fsa"
                     /locus_tag="OQQ26_003253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HCS1858609.1"
                     /translation="MELYLDTSDVAAVKALSRIFPLAGVTTNPSIIAAGKKTLEVVLP
                     ELHEAMGGQGRLFAQVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAE
                     GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA
                     KVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVEAAVAKFEQDWQGAFGRT
                     SI"
     gene            4912..5811
                     /locus_tag="OQQ26_003254"
     CDS             4912..5811
                     /locus_tag="OQQ26_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415345.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HCS1858610.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL
                     LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE
                     VKSVEEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPEMATALLQACHEAGIHTAVETC
                     LHVPWKYIAPSLPYIDLFLADLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIR
                     VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD
                     APELLDFAQQYACQKGLTATLRG"
     gene            5817..8249
                     /locus_tag="OQQ26_003255"
     CDS             5817..8249
                     /locus_tag="OQQ26_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HCS1858611.1"
                     /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
                     DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE
                     HIERFAALARAMAATETRESRRDELLAMAENCDLIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGKVFLPQEKALSAGNFNNFDEVMDAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
                     LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            8395..9210
                     /gene="ybiV"
                     /locus_tag="OQQ26_003256"
     CDS             8395..9210
                     /gene="ybiV"
                     /locus_tag="OQQ26_003256"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase YbiV"
                     /protein_id="HCS1858612.1"
                     /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLQSAYVSENAPEAFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPL
                     VIDKLHIALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
                     DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
     gene            9362..10627
                     /locus_tag="OQQ26_003257"
     CDS             9362..10627
                     /locus_tag="OQQ26_003257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HCS1858613.1"
                     /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
                     TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW
                     DQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQS
                     FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     HVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYVLLRPLLDDVSEDELCGVAPGRVLPVSEQWHPLLIEALTSIPQLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP
                     REDYETNWEGRFTLADLNIHGKRALGMDI"
     gene            complement(10867..12459)
                     /locus_tag="OQQ26_003258"
     CDS             complement(10867..12459)
                     /locus_tag="OQQ26_003258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HCS1858614.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGQMSEVAPGW
                     KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGELRVYPGNYDEYMTAATLARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRAHQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGCDNGPL
                     FKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVEWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
                     TPERVIDFSGNYEDYLRSKGIE"
     gene            12678..13598
                     /gene="ldtB"
                     /locus_tag="OQQ26_003259"
     CDS             12678..13598
                     /gene="ldtB"
                     /locus_tag="OQQ26_003259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCS1858615.1"
                     /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
                     IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
                     KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
                     VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
BASE COUNT         3208 a         3745 c         3521 g         3177 t
ORIGIN      
        1 aaaaagagcc agtcagttgc ttaactgact ggcattagtt cgacggtacc cgtttccacc
       61 gcctcgccct gatacatcac cagtacccga tcggctatct ctgccaccac gcccatatcg
      121 tgcgtgataa agataacgcc catcgacatc tctttttgca atactttgat taattgcagg
      181 atctgcgcct gaatagtgac atccagcgcg gtggttggct catcggcaat cagcaccgcc
      241 gggcggcatg acagcgccat cgcaatcatc actcgctggc gcatcccgcc agagagttga
      301 tgcggataac gtgaaagaat ggtttgtgcc tcaggaatgc gtacctgatc cagcatccgc
      361 ttcgcctcga ccatcgcttc ttcacgactg gcgttctgat gcagacgaat tgattcggca
      421 atctgttcac ccacagtaaa taccgggttc agcgatgtca tcggctcctg aaatatcatc
      481 gccatatccg caccgcgaac atggcgcatt tgtgcagcgc tctgctcgct aagttcaatc
      541 acttcgcgac tgcgccgctg caacagcatt ttatcgcact gtactaaacc gcccgcctgt
      601 tccaacaggc gcatcaatgc caacgcagtc actgacttac cggagccaga ttcgccaaca
      661 attgccagcg tctcaccgcg ttgcaggcta aaagagagat tgcggaccgc agctattttc
      721 tgctggtcct gcataaaggc aatattaaga ttttcaaccg ccagcacatt accggcatca
      781 agttcatcac tgtgtggcaa cggtgtcccc tttttcacgg tagataccgg tggttggcgt
      841 atcgcctgcg tagccccagg cgcgatacat tccttcggtg ttaaacggta gcgcgacatt
      901 cccttcatgg tcgatagcga ttaagccacc gccaccgcca agcgcaggga gtttttccat
      961 tactacccgc tcgcaggctt ccgcgagact taatccgccg taatccatta acgcggcgat
     1021 gtcatatgcc gccagcgcgc ggatgaagac ttcgcccgtg ccggtacaag aaaccgccac
     1081 actggcgtta ttggcgtagc atccggcacc cactaaggga ctatcgccaa ctcgtccggg
     1141 taatttattg gccattccgc ctgtggacgt ggctgccgcc aaattgccgt ctaaatccaa
     1201 cgccacggcc cccacggtgc ccattttctg tttttcatcc agtggcgcag ctgctatggt
     1261 cgaggactgt tgccccttcc ttgcgcgctg ccagtagttg ttcataacgc aaaggcgtgg
     1321 agaaaatctc cggcgagacg cgctccatgc cacgagcaaa cgcaaaattt tctgcccctt
     1381 cgccaatcat catcacatgc gggctttgct ccatcaccag ccgggcggca agaaccggat
     1441 tacgcagatg gctaatgccc gccaccgccc cgctttcagg gtgttaccat ccatcacaca
     1501 ggcgtccagt tcatgggttt catcacgcgt aaagacagcg ccaattccgg cgttaaacag
     1561 tggacattct tccagcagac gcaccgcttc cgtcaccaca tccagcgcac tttcgcccgc
     1621 ttccagcatt ttctgcccgg tttcaacaat tgcagacaac gcctcgatgt agcgtaattc
     1681 ctgttgcaga ctcatctgcg cgcggctaat tgcacctgcg ccaccatgaa ttgcaatgac
     1741 tgctttgccc atagtattcg tccattaagg gtgactcgcc acttttgcta taaatatcag
     1801 aatttttatg aattactcat tcaatttttg aatatagaaa gatggatatg gcatgtaaag
     1861 gcaggaccca acgctacgcc cgaggtggca tacagtctgt ggcgtttttc tgacataata
     1921 ggcaaattcg attttgcctc cgcaggagtg ttttcatgga atttaccacc ggattgatgt
     1981 cgctcgacac cgcgcttaat gagatgcttt ctcgcgtgac cccactaacc gcccaggaaa
     2041 cgctgccact ggtacagtgt tttggtcgta ttctggcgag cgatgtcgtt tcgccactgg
     2101 atgtcccggg gtttgataac tccgctatgg acggctacgc ggtgcgttta gccgatattg
     2161 ccttcgggca accgctgccc gttgccggta aatcctttgc cggtcagccg tatcatggtg
     2221 aatggcctgc gggcacctgc attcgtatta tgaccggtgc gccggtgccg gaaggctgcg
     2281 aagcggtggt gacgcaggag cagactgaac aaacggacaa tggcgtgcgt tttactgctg
     2341 aagtgcgtag cgggcaaaat attcgccgtc gcggtgaaga tatctctgca ggtgcggttg
     2401 ttttcccggc gggaactcgc ctgactaccg cagagctgcc agtaattgct tcactgggga
     2461 ttgccgaagt tccggtgatt cgtaaagtgc gtgtagcgct tttttctacc ggtgatgaac
     2521 tccagttgcc cggtcagccg ctgggcgacg gccaaatcta cgacaccaac cgtctcgccg
     2581 tacacctgat gttagaacag ctgggttgcg aggtaatcaa cttagggatt atccgcgacg
     2641 atccccatgc cctgcgcgcc gcatttattg aagccgacag ccaggcggat gtagtgatca
     2701 gttccggcgg tgtttcagtg ggggaagcgg attacaccaa aacgattctt gaagagctgg
     2761 gggagatcgc cttctggaag ctggcgatta aaccaggtaa accgttcgcg ttcggtaaac
     2821 tcagcaatag ctggttctgc ggcctgccgg gcaacccggt ttcagcgacg ctgaccttct
     2881 atcaactggt acagcctttg ctggcaaaac taagcggcaa caccgccagc ggcctgcccg
     2941 cgcgccagcg cgtacgcaca gcgtcccgcc tgaaaaaaac gccaggacgt cttgatttcc
     3001 agcgcggcgt gctgcaacgc aacgccgacg gtgaacttga agtgacgacc accggacatc
     3061 agggttcaca tatatttagc tcctttagtc tcggcaactg ctttatcgtg ctggaacgcg
     3121 atcgcggcaa tgtggacgtg ggcgaatggg tggaagtaga accgtttaac gcgttgttcg
     3181 gaggcctgta atggcggaac tcagcgatca ggagatgctg cgctacaacc ggcaaatcat
     3241 tctgcgcggt tttgattttg acggtcagga ggcgctaaaa gattctcgtg tgctggtagt
     3301 cggcctcggt ggactcggct gcgcagcttc gcagtatctg gcaagcgccg gtgtcggcaa
     3361 cctgacgctg ctcgacttcg acacggtttc gctctcgaat ctgcaacgcc agacactgca
     3421 cagtgatgcc acggtcgggc aaccgaaggt ggaatccgcc cgtgacgccc tgacgcggat
     3481 caacccacat atcgcgatta cgccagtcaa tgcactgcta gatgacgcag aacttgcagc
     3541 attgattgct gaacacgatc tggtgctcga ctgtacggat aacgttgcgg tacgtaatca
     3601 actgaacgca ggctgttttg ccgcgaagat gccgctggtt tccggcgcgg caattcgtat
     3661 ggaagggcaa atcacggtct tcacttatca ggacggcgaa ccgtgctatc gctgccttag
     3721 ccgcttgttt ggcgagaacg cgttaacctg cgttgaaaca ggcgtaatgg caccgttgat
     3781 cggcgtaatt ggttcgttgc aggcaatgga agcgatcaaa ctgctggcag gttatggtaa
     3841 accggccagc gggaaaatcg tcatgtacga tgcgatgacc tgtcagtttc gcgaaatgaa
     3901 actgatgcgc aatccggggt gtgaggtgtg cgggcagtaa ttgccacctc caggcctgat
     3961 aagacgcgac aagcgccgca tcaggcattt gctccagacg ccagatgcgg cgtgaacgcc
     4021 ttatctggcc tacggttcgg gcacagattt ccaagcgcgg caggcatcgg tgcactccgc
     4081 cacgtcatca gcaatttatg aggatgcaga acgtccggtt aaatcgacgt tctgccaaac
     4141 gctccctgcc agtcctgctc aaacttcgcc acagcggctt ccaccgccgg atagctaatc
     4201 atctgttgtg ccacatccag tggcagagta attgattcac atcctgccag taagcagtcc
     4261 agcgcctgac gcggggtttt gaaactcgct gccagcactt tcgcctgcgg cgcatgcatt
     4321 ttcaataact ggtgtaagtc ggtcacagtc tgaatgccgc taccgccctg agcatcaata
     4381 cgattaacgt aaggcgcaac atattccgca cctgccagcg ccgacagcaa cccttgtgcc
     4441 gcgccatata ccgcggttcc cagcgtcgga atcccttccg cttttaacat cttaatcgct
     4501 gccagcccct cggctgtcac cggaactttc accacgatat ccgcaataat agaacgcaat
     4561 ttacgtgcgt cattcaccat cccttcagca gtggtagcca ttacctgggc aaacagacgc
     4621 ccctgaccgc ccatcgcttc atgaagttcc ggaagcacaa cctccagcgt ttttttaccc
     4681 gcggcgataa tgcttgggtt agtggtcaca cccgccagcg gaaaaatacg tgacagcgcc
     4741 ttcaccgcag caacgtctga agtatccaga tacagttcca taaccatcct caaaatgtac
     4801 tttttgtctg aatgtagact atcacgggaa aactctctga acagttgacg cacatcaatc
     4861 taactttcat tcgaaagtat tttaatgttt gaacgaaaca gagaggcaac tatgattttc
     4921 aatattcagc gctactcgac ccatgatggc cccggtatcc gcacggtcgt atttcttaaa
     4981 ggctgttcgc tgggctgccg ctggtgtcag aacccggaaa gccgcgcccg tacgcaggat
     5041 ctgctgtatg acgcacgact gtgtctggaa ggctgcgagc tgtgcgctaa ggccgcgccg
     5101 gaagtgattg agcgcgcgct gaatggtttg cttattcatc gggaaaagtt aaccccggag
     5161 catctgacgg cgttaaccga ctgctgtccg acacaggcgt taaccgtgtg tggtgaagtg
     5221 aaaagcgttg aggagatcat ggcgaccgtt ctgcgcgata aaccgtttta cgatcgcagc
     5281 ggcggcggct taacgctttc gggtggtgaa cccttcatgc agccggaaat ggcgacggcg
     5341 ctactgcaag cctgccacga ggcaggtatt catactgcgg tagaaacctg tctgcatgtg
     5401 ccgtggaaat atatcgcccc ttctctgccc tatatcgatc tgtttcttgc cgatttaaaa
     5461 cacgttgccg acgcgccgtt taaacagtgg accgacggta acgccgccag ggtgctggat
     5521 aacctgaaaa aactcgccgc agcgggcaaa aaaatcatta tccgcgtgcc gctgattcag
     5581 ggctttaatg ccgacgaaac ctctgtaaaa gccattaccg attttgccgc cgacgagctg
     5641 cacgttggcg aaattcattt tctgccctac cacacgctgg gcatcaacaa atatcactta
     5701 cttaatctgc cctatgacgc cccggaaaaa ccgcttgatg cgccagagct gctcgatttt
     5761 gcccagcagt atgcctgcca gaaagggtta accgcgacct tacgaggata acaaccatga
     5821 ccacactgaa actggacacg ctcagcgacc gcattaaagc gcacaaaaat gcgctggtgc
     5881 atattgtgaa accgccagtc tgtaccgagc gcgcgcagca ctataccgag atgtatcaac
     5941 aacatctcga taagccgatc ccggtacgtc gcgcgctggc actggcgcat cacctggcga
     6001 atcgcaccat ctggatcaaa cacgatgagt tgatcattgg caaccaggca agcgaagttc
     6061 gcgccgcgcc gatcttcccg gaatatactg tctcgtggat cgaaaaagag attgatgatc
     6121 tggcagatcg tcccggtgct ggctttgcgg tgagcgaaga gaacaaacgt gttctgcatg
     6181 aagtgtgccc gtggtggcgc ggtcagacgg tacaggatcg ctgctatggc atgtttaccg
     6241 atgagcaaaa aggtctgctg gcgaccggca tcattaaagc ggaaggcaat atgacctccg
     6301 gcgatgcgca cctggcggtc aatttcccgc tgctgctgga aaaagggctt gatggtctgc
     6361 gtgagaaagt agcggaacgt cgctcgcgca tcaatctgac ggtgctggaa gatttgcacg
     6421 gcgaacagtt cctgaaagcg attgatatcg tgctggtggc agtcagtgaa cacattgaac
     6481 gtttcgctgc cttggcgcgt gcaatggccg cgaccgaaac ccgcgaaagc cgtcgcgatg
     6541 aactgctggc gatggcagaa aactgcgatc ttatcgccca ccagccgccg cagactttct
     6601 ggcaggcgct gcaactgtgt tacttcatcc agttgatttt gcagattgaa tctaacggtc
     6661 actcggtgtc gtttggtcgt atggatcagt atctctaccc gtactatcgc cgcgacgttg
     6721 aactgaacca gacgctggat cgcgaacacg ccatcgaatt gctgcatagc tgctggttga
     6781 aattgctgga agtgaacaaa atccgctccg gctcccactc aaaagcctct gcgggaagtc
     6841 cgctgtatca gaacgtcacc attggcggac aaaatctggt tgatggtcaa ccaatggacg
     6901 cggtgaatcc actctcttac gcgatcctcg aatcctgcgg tcgcctgcgt tccactcagc
     6961 ctaacctcag cgtgcgttac catgcaggaa tgagtaacga tttcctcgac gcctgcgtac
     7021 aggtgatccg ctgcggcttc gggatgccgg cattcaacaa cgacgaaatc gtgatcccgg
     7081 aatttattaa actcggtatt gaaccgcagg acgcttatga ctacgcagcg attggttgta
     7141 tagaaaccgc cgtcggtggc aaatggggct atcgctgtac cggcatgagc tttatcaact
     7201 tcgcccgcgt gatgctggcg gcgctggaag gcgggcgtga tgccaccagc ggcaaagtgt
     7261 tcctgccaca agaaaaagcg ttgtcggcag gtaacttcaa caacttcgat gaagtgatgg
     7321 acgcgtggga tacgcaaatc cgttactaca cgcgtaaatc aatcgaaatc gaatatgtcg
     7381 tcgacaccat gctggaagag aacgtgcacg atattctctg ctcggcgctg gtggatgact
     7441 gtattgagcg agcgaaaagt atcaagcaag gcggcgcgaa atatgactgg gtttctggcc
     7501 tgcaggtcgg tattgccaac ctcggcaaca gcctggcggc agtgaagaaa ctggtgtttg
     7561 aacagggcgc gattggtcag caacagctgg ctgccgcact ggcggatgac ttcgatggcc
     7621 tgactcatga gcaactgcgt cagcggctga ttaacggtgc gccgaagtac ggcaacgacg
     7681 atgataccgt cgatacgctg ctggctcgcg cttatcagac ctatatcgac gaactgaaac
     7741 agtaccataa cccacgctac ggtcgtggtc cggttggcgg caactattac gcgggtacgt
     7801 cgtctatctc cgctaacgta ccgtttggcg cgcaaactat ggcaacgccg gacgggcgta
     7861 aagcccacac cccgctggca gaaggcgcta gtccggcctc tggtactgac catctcggcc
     7921 caacggcggt cattggctcg gtgggtaaac tgcctacggc agcgattctc ggcggcgtgt
     7981 tgctcaacca gaaactgaat ccggcaacgc tggagaacga atctgacaag cagaaactga
     8041 tgatcctgct gcgtaccttc tttgaagtgc ataaaggctg gcatattcag tacaacatcg
     8101 tttcccgcga aacgctgctg gaggcgaaaa aacatccgga tcagtaccgc gatctggtag
     8161 tgcgtgtcgc gggttattcc gccttcttca ccgcgctctc tccagacgct caggacgata
     8221 tcatcgcccg tactgaacat atgctgtaat ctcttcggcc cggctgcggc gtcgccgggc
     8281 taaatcattc acatcatcaa tttcatcctt actttcattc gaaatataat ttgtgctctg
     8341 cgtcacattg ttattacact gttacggttt cattttcgag ccaggagcac acctatgagc
     8401 gtaaaagtta tcgtcacaga tatggacggt acttttctta acgacgccaa aacgtacaac
     8461 caaccacgtt ttatggcgca atatcaggaa ctgaaaaagc gcggcattaa gttcgttgtc
     8521 gccagcggta atcagtatta ccagcttatt tcgttctttc ctgagctaaa ggatgagatc
     8581 tcttttgtcg cggaaaacgg cgcactggtt tacgaacatg gcaagcaact gttccacggc
     8641 gaactgaccc gacatgaatc gcggattgtt attggcgagt tgctaaaaga taagcaactc
     8701 aattttgtcg cctgcggtct gcaaagtgca tatgtcagcg aaaatgcccc cgaagcattt
     8761 gtcgcactga tggcaaaaca ctaccatcgc ctgaaagctg taaaagatta tcaggagatt
     8821 gacgacgtac tgttcaagtt ttcgctcaac ctgccagatg aacaaatccc gttagtgatc
     8881 gacaaactgc acatagcgct cgatggcatt atgaaacccg tcaccagtgg ttttggcttt
     8941 atcgacctga ttattcccgg tctacataaa gcaaacggta tttcgcggtt actgaaacgc
     9001 tgggatctgt caccgcaaaa tgtggtagcg attggcgaca gcggtaacga tgcggagatg
     9061 ctgaaaatgg cgcgttattc ctttgcgatg ggcaatgctg cggaaaacat taaacaaatc
     9121 gcccgttacg ctaccgatga taataatcat gaaggcgcgc tgaatgtgat tcaggcggtg
     9181 ctggataaca catccccttt taacagctga cctctctacc ggagccgtgc gctccggttt
     9241 tcccttcttt ttacatcctg tacatcacat caaatcatca aacttgcatt aacttattta
     9301 taacttatat tgtcacatgc aaatcagaat ggtttcgaat gaaagttaat gagaggtggt
     9361 tatggcttct acttttacca gcgacacatt gcctgccgat cacaaagcag ctatccgtca
     9421 gatgaagcac gcgctgcggg cgcagcttgg cgacgtccag cagatcttta atcagctaag
     9481 cgatgacatt gccacgcgag tggctgaaat caacgcactc aaagcacagg gcgatgccgt
     9541 ctggccggtg ctgtcttatg ccgatatcaa agcaggtcat gttactgcag agcagcgcga
     9601 acagattaaa cgtcgcggtt gtgcggtgat aaaaggccat ttcccccgcg aacaagcgct
     9661 aggctgggat cagtcgatgc tggactatct ggaccgcaac cgctttgacg aggtctacaa
     9721 aggccccggc gataatttct tcgggacgct cagcgcttca cgtcccgaga tttaccccat
     9781 ctactggtcg caggcgcaaa tgcaggctcg ccagagtgaa gaaatggcga atgcgcagtc
     9841 gtttctcaat cgtctgtgga catttgaaag tgatggaaag caatggttta acccggatgt
     9901 gagcgtcatc taccctgacc gtatccgccg ccgtccgccc ggaacgacct ccaaaggtct
     9961 tggagcgcat accgactccg gggcactgga acgctggctg cttccagcgt atcagcacgt
    10021 tttcgccaac gtctttaatg gcaatctggc gcaatatgat ccctggcatg cggcacatcg
    10081 tacggaagtt gaagagtaca cggtggacaa caccaccaaa tgttccgtgt ttcggacatt
    10141 ccagggctgg acagcgctct ctgatatgct gcctggtcag gggctgctgc acgtcgtgcc
    10201 cattcctgaa gccatggcgt acgtactgtt acgtccgctg cttgatgatg tgtcggagga
    10261 tgaactgtgc ggcgtagcgc ccggaagagt attgccggta tcagagcaat ggcatccact
    10321 gttgattgag gcattaacca gcattccaca actcgaagcc ggagactccg tctggtggca
    10381 ctgcgacgtc atccattccg ttgcccccgt tgaaaatcaa cagggctggg gcaacgtgat
    10441 gtacattcct gcggcaccga tgtgcgagaa aaatcttgcc tacgcgcaca aggtgaaggc
    10501 cgcactggaa aaaggcgcat cgccgggcga cttcccgcgc gaggactatg aaacaaactg
    10561 ggaaggacgc tttacgcttg ccgacctcaa cattcacggt aagcgagcgt tgggcatgga
    10621 tatttgagag ttaatggaag tgaattgatg tgggattaag aaaatcgatt cgacgttact
    10681 cagattgctg acaagtgcgc tttcttaatg cctgatgcgg cgttaacgcc ttatctggcc
    10741 tacaaagtcc tgcagattca atatattacg gtactgcgta ggcctgataa gcgtagcgca
    10801 tcaggctatt ttgcatttgt catcagccgc cgtccccccg acagtatcgg ggtgacggat
    10861 aataacttac tcgatccctt tactacgcag gtaatcttcg taattaccgc taaagtcgat
    10921 cacgcgttcc ggggtgattt ccagaatgcg ggtcgccagg gagcttacga actcacggtc
    10981 gtgtgaaaca aagatcagcg tgccctgata cagttccagc gccatgttca gtgactcgat
    11041 ggattccata tccaggtggt tggtcggttc gtccatgatc agaatgttcg gcttctgcat
    11101 cattaactta ccaaacagca tccgcccttt ttctccaccg gaaagcacct tcgctggctt
    11161 tttgatgtcg tcctggctga acagcaaacg accgagaatg ctgcgtaccg cctgctcgtc
    11221 atcgccttcc tgcttccact gactcatcca ttcgaacacg gtcagatcat tttcaaactc
    11281 atattcgtgg tcctgggcgt agtaaccaat gcgcgcgttt tcagaccatt ctacggtgcc
    11341 gctgtccggt tgcagatcgc ccaccagcgt tttcagcagc gttgatttac cgacgccgtt
    11401 ggtacccagt accgcaagtt tttcaccgac ctccagcagc aggttgagat ttttaaacag
    11461 tggaccgtta tcacaccctt tggtcagacc ttccacttcc agcgcgttac ggaacagttt
    11521 cttatcctgt tcaaaacgga tgaacgggtt ctgacggctg gaggctttca cctcttccag
    11581 tttgatttta tcaatctggt gcgcgcgcga agttgcctgg cgagatttcg aggcgttggc
    11641 gctaaagcgg ctaacgaaag attgcagctc agcaatctgc gctttcttct tggcgttatc
    11701 agccagcaga cgttcacgcg ccagggtcgc cgccgtcatg tactcatcgt agttgcccgg
    11761 ataaacgcgc agctcgccgt aatccagatc cgccatgtgg gtacaaacca tgttaaggaa
    11821 gtgacggtcg tgcgagatga tgatcatggt gctgtcacgc tcgttcagca cctgttccag
    11881 ccagcgaatg gtgtcgatgt cgaggttgtt ggtcggttcg tcgagcagga gaatgtctgg
    11941 atcagcaaac agcgcctgcg ccagcagcac acgcagcttc cagccaggag caacttcact
    12001 catctggccg tagtgctgtt ccactggaat tcccacgcca agcaacaatt caccggcgcg
    12061 agcttccgca gagtaaccgt ccatttcgcc gtatttaact tccagatcgg ccactttata
    12121 gccgtcttct tcactcattt ccggcaaagc atagatgcgg tcgcgctcct gcttcacttc
    12181 ccacaactct ttatgcccca tgatcaccgt atccagcaca gtgaactctt caaaggcaaa
    12241 ctgatcctga cgcagtttac caatgcgctc gttgggatcg agggaaacgt tacccagcgt
    12301 cggctcaagg tcgccgccga gaatcttcat aaaggtggat ttaccactac cgttcgcgcc
    12361 aatcaggccg taacggttgc cgccgccaaa tttgacggaa atgttttcaa acaacggctt
    12421 actgccgaac tgcatggtga cgttactgga aactaacaca ggcgtatcct gaaaagagat
    12481 atgacaaacc gcgcattatg ccataactct gaaagaagat cctgctcctc gcttaaggtc
    12541 tacactcaag ccaaaggcaa aaaatgtgat ttcgtacaca tctgatttca ctgtgagctg
    12601 gaatgaactt ataatgcgct tccaatactc taatattctc aacccaatgg cctgccaggc
    12661 acaaaatctc gcttaacatg aatatgaaat tgaaaacatt attcgcagcg gccttcgctg
    12721 ttgtcggctt ttgcagtacc gcctctgcgg taacttatcc tctgccaacc gacgggagtc
    12781 gcctggttgg tcagaatcag gtgatcacca ttcctgaagg taacactcag ccgctggagt
    12841 attttgccgc ggagtaccag atggggcttt ccaatatgat ggaagcgaac ccgggggtgg
    12901 ataccttcct gccgaaaggc ggtactgtac tgaacattcc gcagcagctg atcctgccgg
    12961 ataccgttca tgaaggcatc gtcattaaca gtgcagagat gcgtctgtat tactatccga
    13021 aagggaccaa caccgttatc gtgctgccga tcggcattgg tcagttaggc aaagatacgc
    13081 ctatcaactg gaccaccaaa gttgagcgta agaaagcagg cccgacctgg acgccgaccg
    13141 ccaaaatgca cgcagagtac cgcgctgcgg gcgaaccgct accggctgtc gttccggcag
    13201 gtccggataa cccgatgggt ctgtatgcac tctacatcgg tcgcctgtat gctatccatg
    13261 gcaccaacgc caacttcggt atcggcctgc gtgtaagtca tggttgtgtg cgtttgcgta
    13321 acgaagacat caaattcctg ttcgagaaag taccggtcgg tacccgcgta cagtttattg
    13381 atgagccggt aaaagcgacc accgaaccag acggcagccg ttatattgaa gtccataacc
    13441 cgctgtctac caccgaagcc cagtttgaag gtcaggaaat tgtgccaatt accctgacga
    13501 agagcgtgca gacagtgacc ggtcagccag atgttgacca ggttgttctt gatgaagcga
    13561 ttaaaaaccg ctccgggatg ccggttcgtc tgaattaatc ttcaaaactt aaagcaaaag
    13621 gcggactcat aatccgcctt ttttatttgc c
//
LOCUS       DAJVTL010000113        13639 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.115, whole genome shotgun sequence.
ACCESSION   DAJVTL010000113 DAJVTL010000000
VERSION     DAJVTL010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13639
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.115"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(234..1496)
                     /locus_tag="OQQ26_003260"
     CDS             complement(234..1496)
                     /locus_tag="OQQ26_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1858616.1"
                     /translation="MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRI
                     LGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIA
                     RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEI
                     ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDG
                     YKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERKPLPGVKFSYRGS
                     KMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENTVNNALRVMGYDT
                     TQDVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLML
                     QWWADFLDANREQCISPFEYAKINNPLK"
     gene            complement(1694..1769)
                     /locus_tag="OQQ26_003261"
     tRNA            complement(1694..1769)
                     /locus_tag="OQQ26_003261"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1734..1736),aa:Phe,seq:gaa)
     gene            complement(1875..2582)
                     /locus_tag="OQQ26_003262"
     CDS             complement(1875..2582)
                     /locus_tag="OQQ26_003262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HCS1858617.1"
                     /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLG
                     IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESF
                     IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
                     SIPLLIIQLTLAWAAALILPLTTPAMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
                     ALLLAMPLSAAWTAWFA"
     gene            2980..5115
                     /gene="speC"
                     /locus_tag="OQQ26_003263"
     CDS             2980..5115
                     /gene="speC"
                     /locus_tag="OQQ26_003263"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
                     /protein_id="HCS1858618.1"
                     /translation="MKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITAADSR
                     SGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPP
                     FYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGD
                     LLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLMRGDLVLFDRNNHKS
                     NHHGALIQAGATPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPFR
                     LAIIQLGTYDGTVYNARQVIDTIGHLCDYILFDSAWVGYEQFIPMMADSSPLLLELNE
                     NDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYP
                     LFAALDVNAKIHEGESGRRLWAECVELGIESRKAILALCKLFRPFIPPVVDGKLWQDY
                     PTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVP
                     ATILAHYLRENGIVPEKCDLNSILFLLTPAESHEKLAQLVAMLAQFEQHIEDDSPLAE
                     VLPSVYNKYPVSYRDYTLRQLCQEMHDLYVSFDVKDLQKAMFRQQSFPSVVMNPQDAH
                     SAYIRGDVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNL
                     LPGFSPELQGVYSETDADGMKRLYGYVLK"
     gene            complement(5163..6419)
                     /gene="nupG"
                     /locus_tag="OQQ26_003264"
     CDS             complement(5163..6419)
                     /gene="nupG"
                     /locus_tag="OQQ26_003264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupG"
                     /protein_id="HCS1858619.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN
                     SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM
                     QLYIGAALSAVLVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM
                     LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS
                     RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE
                     KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV
                     VLAFAFMAMFKYKHVRVPTGTQTVSH"
     gene            complement(6621..7700)
                     /gene="mltC"
                     /locus_tag="OQQ26_003265"
     CDS             complement(6621..7700)
                     /gene="mltC"
                     /locus_tag="OQQ26_003265"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417438.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HCS1858620.1"
                     /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF
                     AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA
                     IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK
                     NRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES
                     SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM
                     LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT
                     TRHPSAESRRYLYKVNTAQKSYRRR"
     gene            complement(7765..8040)
                     /locus_tag="OQQ26_003266"
     CDS             complement(7765..8040)
                     /locus_tag="OQQ26_003266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HCS1858621.1"
                     /translation="MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
     gene            complement(8068..9120)
                     /gene="mutY"
                     /locus_tag="OQQ26_003267"
     CDS             complement(8068..9120)
                     /gene="mutY"
                     /locus_tag="OQQ26_003267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HCS1858622.1"
                     /translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
                     VATVIPYFERFMARFPTVTDLANALLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
                     KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
                     ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAATNNSWSL
                     YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRHWLAQ
                     RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            9281..10000
                     /gene="trmB"
                     /locus_tag="OQQ26_003268"
     CDS             9281..10000
                     /gene="trmB"
                     /locus_tag="OQQ26_003268"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HCS1858623.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
                     CLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            10000..10326
                     /locus_tag="OQQ26_003269"
     CDS             10000..10326
                     /locus_tag="OQQ26_003269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HCS1858624.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL
                     FDVWWD"
     gene            10510..11229
                     /locus_tag="OQQ26_003270"
     CDS             10510..11229
                     /locus_tag="OQQ26_003270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HCS1858625.1"
                     /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL
                     DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV
                     NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGNLK"
     gene            11405..12451
                     /gene="ansB"
                     /locus_tag="OQQ26_003271"
     CDS             11405..12451
                     /gene="ansB"
                     /locus_tag="OQQ26_003271"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HCS1858626.1"
                     /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDDVWLTLAKKINTDCDKT
                     DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
                     HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSSGVGNGNLYKSVF
                     DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPQQIQQIFNQY"
     gene            12568..13575
                     /locus_tag="OQQ26_003272"
     CDS             12568..13575
                     /locus_tag="OQQ26_003272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 family protein"
                     /protein_id="HCS1858627.1"
                     /translation="MKKQWIVGTALLVLMTGNVWADGEPPTENILKDQFKKQYHGILK
                     LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLTDYELLEQTWTKDKAVKFSAM
                     LTSKGTPTSGWSVNFYSFQAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
                     TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDVNGKQMTREEAFKKIHQQRDEFNK
                     QNDSEAFAVKYDKEVYQPAIAACHKHSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
                     RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGMI
                     K"
BASE COUNT         3473 a         3269 c         3552 g         3345 t
ORIGIN      
        1 catgacaagg tcatcgggca ttatctgaac ataaaacact atcaataagt tggagtcatt
       61 acctggtttt tgatgccagc cataacgtgt ttgactacaa agtattacga aagaacttta
      121 atgtgcccct ggaataattc attaaagtaa tttacttcgc tatccttttt ccagttactc
      181 acaaagaaaa atattcagaa aataattccc gggctggctg cccgggatga ttactatttt
      241 aatggattgt taatctttgc atattcaaac gggctgatac attgttctct gttcgcatcc
      301 agaaaatctg cccaccactg tagcataagt cgacgttctt ccagatgttc ggctttatgg
      361 atatacgcag cacgtacacc attacgctcc tgatggctca tctggcgttc cacagcatcg
      421 cgggaccaca aacctgattc tattaatgca ctacatgcca tagcccggaa tccatgacca
      481 cagacatcct gggttgtgtc ataccccata accctcaggg cgttatttac ggtgttttca
      541 ctgattggtt tacgtgggtc atgtgctccc gtaaagatca gaccattttc acctgcccat
      601 gtctgaagtt ctgccagtat ggctacagcc tgttggctga gtggcacaag atgtggtgtt
      661 cgcatcttgg agccccggta tgaaaatttt acgcctggca gaggtttgcg ttcggctgga
      721 atagtccaca tggcattgtc aatatcaatt tcagaccagc gggcatatct gagttcactg
      781 gaacgaataa aaaccagtaa attcagcata actgccagtc gggtgacagg ctggccttta
      841 taaccgtcaa tacgcgacag aagttcaggc aggcgtgaaa gatccagagc agggcgatgc
      901 tggcgtttta ccgtggtcaa tgcaccagcc atatccagag ccgggttata tctgatgatg
      961 ccagactgta cggcataacg cattacagca gatattcttt gctgcagacg actggcgatt
     1021 tcataaattt gtttagcttc tgcagcacga acagggataa gcaggtccgg ggtactgagt
     1081 gttgtgatat cccggttgcc gataaagggg aaaacgtgtg tctcgaggct tttgagtact
     1141 ttatcgctgt gtgattgtgc ccattgttta ttactggcat gccagcgtcg tgcaatatgt
     1201 tcaaaagaga gttgtaaatc agggactact tttttagctc ttttctgttc gcaagggtca
     1261 accccctccg aaatcagttt tcgggcctca tcccgttttg tacgagcttc ggagagagaa
     1321 acttccggat acacaccaag tgccagggtt ttctccttac ccagaatacg ataacggaga
     1381 cgccagtaac gggaaccatt aggatgaacc agcaggaaca tgccggcccc gtcagtgagt
     1441 ttataagcct tgtcagtggg ctttgcagcc cggatttttg cgtcagtcag tgccatagtt
     1501 cagccttctg aatgcgttaa agagggtaca aattctgtcg aactggggta tacccgcaat
     1561 tatacccaca caatggggtt gatgtggggg gaatctggtt gagttcggta gaattgattt
     1621 ggaggcagaa cgcttaaatt gtggcgttct gaaacgaaaa acggacctcc gtggaggtcc
     1681 gttgatatga atttggtgcc cggactcgga atcgaaccaa ggacacgggg attttcaatc
     1741 ccctgctcta ccgactgagc tatccgggca acggggcgca ttaaacctga ttcgcctcgt
     1801 ctcgtcaatc aaatttcttc aatttactgc agactgcaca atctatcatc actttgccgc
     1861 tattgcacgc attgtcaggc aaaccaggcg gtccaggcgg cggaaagcgg cattgccaga
     1921 aggagtgctg gaagcatgtt gaccaccggg aacattttaa tgccacagat gcgtaatccg
     1981 gttgccagca gcaataaacc gcctacggcg ctgaagtctg ccatcatcgc cggtgtggtc
     2041 agcggtaata tcagcgcggc agcccacgcc agcgttaact ggatgatcag taatgggata
     2101 ctaatcaccg ataccgcaat acccagcgag caggcgaaga tcatcgccgt aaagaaatca
     2161 agaaatgact tggcgattaa aatactcgga tcgccggtca tcccttcgtt catcgccccg
     2221 aagatcccgg tgccgctggc gcaaaacagg acaataatcg cgacataatt ctgaataaaa
     2281 gattcatgcg ctggcttctt acgtgagtga cgaaacagat tttgtgcttt ggcgactgct
     2341 gtattgacac ctttctccag caaacaaatt tcgccaatta gagcgccaag tagcgtagct
     2401 aaaaccatcg ctggaaggtt ggcacatttc accaccagta aaataccaat ccccagcgat
     2461 gccagaccaa aaatagatgt catggagacg cggatacgtt ccggtaagcg ttggctgagc
     2521 agtgcgccga gaacgccacc cagtaatact gcactagcgt tgataaaagg gccgatgacc
     2581 acaagagttc ctgttagctg tattgtttga ttttcttatt atgaactttt ggccttgttg
     2641 atggcttgtc tggtcgcaaa gtcctggctt gcacgcctta gcgaaaggtg ccatgattgc
     2701 gcgaattttc tcctctctgt acggagtttg cccgatgcac gccatctcct tacattctct
     2761 cgcttatcgc cgtttcgcgc gaaacgtttc cctttctatg ttactgctca tgcggtgaag
     2821 ttaacgcacg ctcactgcag gacaacagta aaatcagagc gtttctgctt ttactgatgt
     2881 ctggcggtcg gagctggtga ccagtttgac ccatatctca tggggcaggg ttttccacct
     2941 tgtccggtat tcttacttcc ccgaaacggg tttgcgctta tgaaatcaat gaatattgcc
     3001 gccagtagtg aactggtatc ccgactttct tctcatcgtc gcgtggtggc gttgggagat
     3061 actgatttta cggacgtcgc ggcagtcgtc attaccgctg cggatagtcg cagtgggatt
     3121 cttgcgttgc ttaagcgcac cggttttcat ctaccggtgt ttttgtattc cgaacatgct
     3181 gttgaattac ctgcgggcgt tacggcggta atcaacggca acgagcagca gtggctggag
     3241 ctggaatccg cagcctgtca gtatgaagag aatttgctgc caccgtttta tgacacgctg
     3301 acgcagtacg ttgagatggg caacagcacc tttgcttgcc ctggacatca acatggtgcg
     3361 ttttttaaaa agcatcctgc cggacgccat ttttacgatt tctttggtga gaacgtcttt
     3421 cgcgccgata tgtgtaacgc tgacgtaaaa ttgggcgatc tgcttattca tgaaggatcg
     3481 gcgaaagatg cgcagaaatt cgcagccaaa gtctttcatg ccgataaaac ctattttgtg
     3541 ctgaacggca catcggcagc gaataaagtg gtgacgaatg cgctgttaat gcgtggcgat
     3601 ctggtgctct tcgaccgtaa caaccataag tcgaatcatc acggcgcgtt gattcaggcg
     3661 ggggcgacgc cggtctatct ggaagcttca cgtaacccgt ttggtttcat tggcggtatt
     3721 gatgcgcact gttttaatga agagtatctg cgccagcaaa ttcgcgacgt tgcgccagaa
     3781 aaagccgacc tgccgcgccc gtttcgcctg gcgattattc agttgggaac ctatgacggc
     3841 actgtctata acgcccgtca ggtgatcgat accattgggc atctgtgtga ttacattctg
     3901 tttgattccg cgtgggtcgg ttacgaacag tttatcccga tgatggcgga tagctcgccg
     3961 ctgctgttag aacttaacga aaacgatcca gggatctttg tgactcagtc ggtgcacaaa
     4021 cagcaggctg gattctcaca gacgtcgcag atccataaaa aagataacca tatccgcgga
     4081 caggcgcgtt tttgcccgca taagcggttg aataacgcct ttatgctcca tgcttctacc
     4141 agccctttct atccgctgtt tgctgcactg gatgttaacg ccaaaattca tgaaggggag
     4201 agtgggcgtc ggctgtgggc tgagtgcgtt gagttgggta ttgagtcgcg caaggctatt
     4261 cttgcgctct gtaagctgtt ccgcccgttt atcccgcccg ttgttgatgg caaattgtgg
     4321 caggattatc cgacatcagt gttagccagc gaccgccgtt ttttcagttt tgagccgggg
     4381 gcgaagtggc acggctttga aggatatgcc gcggatcagt attttgttga tccgtgcaag
     4441 ctgttactca ctacaccagg tatcgatgcc gaaaccggcg aatatagcga ctttggcgtt
     4501 ccggcgacga ttctggcgca ctatctgcgt gagaacggca ttgtgccgga gaagtgcgat
     4561 ctcaactcca ttctgttctt attaactccg gcggaaagcc acgagaagct ggcacaactg
     4621 gtggcgatgc tggcgcaatt tgaacagcat attgaggatg actcgccgct ggctgaggtg
     4681 ttgccgagcg tttataacaa atatccggtg agctatcgcg actacaccct gcgccagttg
     4741 tgtcaggaga tgcacgatct gtatgtcagt ttcgacgtca aagacttaca aaaagcgatg
     4801 ttccgccagc agagtttccc gtcagtggtg atgaaccccc aggatgcgca tagcgcttat
     4861 attcgcggtg acgtggagtt ggtgcggatt cgtgatgccg aagggcgaat tgcggcagaa
     4921 ggggcgttgc cttatccacc tggcgtgctt tgcgtggtac ccggggaagt ctggggtggg
     4981 gcggttcaac gttatttcct tgcactggaa gaaggggtga atttgttgcc gggattttcg
     5041 ccggagctgc aaggtgttta tagcgaaacc gatgcggatg gcatgaaacg gttgtacggt
     5101 tatgtgttga agtaagaata aaaaacgggt caccttctgg cgacccgttt ttctttgcgt
     5161 aattagtggc taaccgtctg tgtacctgtc gggacacgaa cgtgtttata tttgaacatc
     5221 gccatgaacg cgaaggccag aaccacggag taaccagcga aaatcaacca tacggtctgc
     5281 cagtcggtaa tgccgttttg ggtgtacatc tcaacaactt taccgctcac gatgccgccg
     5341 aggatacagc cgaagccgtt agtcatcatc aggaacatcc cttgtgcact ggcgcgaatt
     5401 gccgggctaa cttctttttc gacaaacacc gaaccagaga tgttgaagaa gtcgaatgcg
     5461 caaccgtaaa cgatcatcga cagtaccagc agtacagtac cgaacggagt cgggtcgccg
     5521 taagcaaaca gcgcaaaacg caggatccac gccacaatac tgatcatcat tacgttctta
     5581 ataccgtagc ggcttaagaa gaacgggatg gtcagaatga acagggtttc agagatctgc
     5641 gaaatcgaca tgatgattga cgcatgctgc acgatgaagc tgctggcaaa catcggatct
     5701 ttgtcgaagc tgtgcaggaa ggtattaccg aacatgttgg taatctgcag ttccgcgccc
     5761 agcagcattg agaagatgaa gaagattgcc atacgcttgt ttttaaacag cgcgaatgca
     5821 tcgaggccca gcagggttgt ccagctctga ttcgcttgct gtttagcaac cggaatatgc
     5881 ggcagagtca gggtaaacag aaccagaacg gcggaaagtg ctgcgccaat atacagctgc
     5941 atgtggctta attcgaagcc agacaggctc accacccaca ttgccatgat aaagccgatg
     6001 gtgccccaga tacggattgg tgggaagtca gtaacgatat ccatcccggc attttgcagg
     6061 cgatagtaag agatggtgtt gattaaccca agcgttggca tataagcaaa cgagttaatc
     6121 aatatcacaa ggaacatcgc ctccggcgtc gtgacctgtg ccgccatgaa cagcgtgata
     6181 gcgccaatgg tgtggcaaat ggcatagacc catttcgcac ttaaccattt gtcggccaca
     6241 atccccagca gcgcaggcat aaagaccgcg gcgataccca gtgagctata aactgcgcca
     6301 atagaagcac cgtcaaactt cagggtaaca aacatatagg aaccgagggt cgtcagccaa
     6361 cttccccaca gacagaactg cagaaaagag aggattttca gctgcagctt aagattcatg
     6421 ttaatttcct cacatcgtga tgcggatgag tgtttgaaaa agcacatttg accgtgcgag
     6481 atgatgggat tctatcaact tcgcggactg gttttttgtt acctgtggca aataattgca
     6541 aacattccca atttgcaaaa cgaaattgtg atgtgtataa catttttgcc cctgagcatc
     6601 gtcaggggcg gttaatggaa ttatcggcgg cggtaggatt tttgcgcggt attcacttta
     6661 taaagataac ggcgagattc cgcagaggga tggcgggtcg tcagcgtctg ataaacatcg
     6721 cccggcgtca tggtgttaat aatattggca gcctgaatct tatcattcga aaagactcgc
     6781 agcacgctgc ctgcgccgcc gttataggcg gtgatgacgg cataacgccg tgacgttggg
     6841 ttatcaattc cgccaagata aacattgttc agcatcgcca gatacgcggt gccggtatca
     6901 atattgctgg caggatcaaa caagaaactg cggctcggcg tgccggattt cccctgcgag
     6961 cggaacacat ctttcccggc agtatgttgt accacctgca ttaaccccag cgcatcggaa
     7021 cggctgaccg catacgggtt aaaggaagat tcagtctgca taattgccag aatcagcgac
     7081 tcatcaacgc catatttccg tgacgcctgg cggaccatgc cgagatattt gtgcgcacgt
     7141 ttatcaaggt ggttcggcac catgttaatg gtgacgctgt agatgatacg cagcccgttg
     7201 ctgcggctct tcagacggtt tttcagcaga taatccgcga agttgcttgc gcgaccttcc
     7261 cagcgaatcg gctgcccggt gttgtccacc acctgaccgt aaaggaaagg ttctttcgaa
     7321 attgtaatat catcaacgtc ggaatagaga tcgaccgaac tcggatcgtc acccatcagc
     7381 aacgttttga taattgcccg gcgcaaatgc gcggcaggtt ctgtcccggc gatggtttcg
     7441 atagtaatcg taccgtcatc gaagttgatg tggctgcggg tctgatattg atcggtgtat
     7501 ttcacgtagt ccttaggacc ggcgatcacc acctctttga atccccagat gttctcaata
     7561 ttgtgggcaa attgccccat cagaatatca aaaccgttgg tgtctttgac ccaggcttcg
     7621 ttataggtat cgcctttttt ggtcgttgaa caggagatga gcaacggcgc aatcaaagcc
     7681 agcgcgagat attttttcat cattccgggt gcgtgttgtg tttgttttta tgcaagctgc
     7741 cggaggcgtg ctccggcact gtttttattt tttatcttcc ggcgtatagc cctcgatatg
     7801 cacctcttta ccctcgaaca ggaagttgac catctcctgc tccagcagct tgcggtgctc
     7861 ggcattcatc atgttgagtt tcttttcatt aatcagcatg gtttgtttgt gctgccactg
     7921 cgcccaggct tctttggaga tctcgttata gatgcgtttt cccagctcgc cggggtacag
     7981 ctgaaaatcc tgaccttctg cttcacgttg caggaaagta caaaaaatcg ttctgctcat
     8041 aaatcatcct ctttatcgac tcacgcgcta aaccggcgcg ccagtgcgta actgctgtaa
     8101 caaacgctcc acgggagccg ccaggccaac tgacggcggt tgcgctaagt tataccagag
     8161 cgcattgcct tcatccatgc agccggtgaa tgacgacacg ggaagccaca taggcacaat
     8221 atctaagtgg aaatggctga aggtatgccg aaacgcggtc agttgcgtca ggttatcggc
     8281 agcaatctgc cgttgtgcca gccaatgccg caaactttct tcgtcggcaa actgcgggaa
     8341 acagtataaa ccgccccaca atccgctcgg cggacgctgc gccagcaata cttcatcttc
     8401 gtgctgtaac aggagaaagt agccggtgcg ctccggcagc gtctgtttcg gttttttgcc
     8461 cggataaagc gaccagctat tgttggtggc ggcaatacat ccgttttgta gcggacagag
     8521 cgaacatttc ggcttcgaac gcgtgcaaat catcgcgccc aaatccatca tcgcctgatt
     8581 aaaccgttcc acgccgaccg cgggcgtcac ctgctcgctt aaactccata atttattctc
     8641 gacctctttt ttcccaggcc agccgcttac agcatagcag cgcgccagca cccgtttgac
     8701 gttaccgtcg agaatcggaa agtgcttacc cagagaaagc gagagaatcg cgcctgcggt
     8761 ggaacgcccg acgcccggca gtgctgcaac ttcctcaaag gtttccggga atttaccgcc
     8821 gtgtaaggtc gccacttgtt gtgccgcttt atgcagattg cgcgcgcggg cgtaatagcc
     8881 aagcccggtc cacaagtgga gaacttcgtc gagcagcgca ttggcgagat cggtcaccgt
     8941 cgggaagcgc gccataaagc gttcaaaata ggggataacg gtcgcaacct gagtttgttg
     9001 caacatcact tctgagagcc atactttgta gggcgtcttg tcaatttgcc agggcagagt
     9061 ttttcgcccg tatttatcgt accagtccag aacctgggct gaaaattgcg acgcttgcat
     9121 ggtcaccgaa tttactgttg ttgggggcaa gattgcagca cagcgacggc agggtgtaaa
     9181 ccggaacttt ccgcagccac ggccttatca tgcttgcatc cggcaactaa ctttggataa
     9241 tgcccgtttt cagaacactt tcacaagcga ctaaatcttt atgaaaaacg acgtcatttc
     9301 accggaattt gatgaaaacg gccgcccact gcgccgtatc cgtagttttg tgcgccgcca
     9361 ggggcgactg accaaaggcc aggaacatgc gctggaaaac tactggccgg tgatgggcgt
     9421 tgagttcagc gaagatatgc tggatttccc cgcgcttttt ggccgtgaag cgccggtgac
     9481 gcttgagatt ggttttggca tgggggcgtc gctggtggca atggctaaag atcgccccga
     9541 gcaggacttc ctcggcattg aagtgcattc accgggcgtt ggtgcgtgcc tggcttctgc
     9601 gcatgaagaa ggtttaagca acctgcgcgt gatgtgtcac gatgcggttg aagtgctgca
     9661 taaaatgatt cctgacaatt cattgcgcat ggtgcagctc tttttccctg acccgtggca
     9721 caaagcgcgc cataataaac gccgtatcgt tcaggtgccg tttgccgaac tggtaaaaag
     9781 caaactgcag ctggggggcg tattccatat ggcgaccgac tgggaacctt atgcggaaca
     9841 tatgcttgaa gtgatgtctt ctattgacgg ttataaaaac ctgtcagaga gtaatgatta
     9901 cgtaccgcgt ccggcatcac gtccggtgac gaaatttgaa caacgtggtc atcgtcttgg
     9961 tcacggagta tgggacttaa tgttcgagag ggtgaaataa tggcaaagaa ccgtagccgt
    10021 cgtctgcgta aaaaaatgca catcgacgaa ttccaggaat taggattttc ggtggcatgg
    10081 cgattcccgg aaggtacatc ggaagaacag attgataaaa ccgttgatga ttttattaac
    10141 gaggttatcg aaccgaacaa actggccttt gacggcagcg gttatctggc ctgggaaggt
    10201 ctgatctgca tgcaggaaat cggcaaatgc accgaagaac atcaggcgat tgtgcgtaag
    10261 tggctggaag agcgcaaact ggatgaggtt cgcaccagcg aacttttcga cgtttggtgg
    10321 gactaagaaa gcatacgggc gatgacaaat gcaaaactgc ctgatgcgct acgcttatca
    10381 ggcctacaaa gatgcacgat cgagtaggcg ggataaggcg tttacgccgc atccggcatg
    10441 gaaaacgcgt actttgttat caatctgggg ccagcatatg ctggcctgat ttgttcttga
    10501 gggaagacta tgatgcgcaa aatgctgctg gcggcagcac tttcagtgac ggcaatgacc
    10561 gctcacgccg actaccagtg cagcgtcacg ccgcgtgacg atgtgattgt cagcccgcaa
    10621 accgtgcagg tgaagggcga aaacggcaat ctggtgatca cgccagacgg caacgtgatg
    10681 tataacggta agcaatattc cctgaatgcc gcccagcgcg agcaggcgaa ggattatcag
    10741 gctgaactac gtagcacgct gccgtggatt gatgaaggcg cgaaaagccg cgtcgagaaa
    10801 gcccgtattg ctctggataa aattatcgtt caggagatgg gcgaaagcag caaaatgcgc
    10861 agccgtctga ccaaacttga tgcgcagctg aaagagcaga tgaaccgcat tatcgaaacg
    10921 cgcagcgatg gcctgacgtt tcactataaa gccattgatc aggttcgcgc cgaaggccag
    10981 caattagtga atcaggcaat gggtggaatt ttacaggaca gcattaatga aatgggcgcg
    11041 aaagcggtgc tgaaaagcgg cggtaaccca ttacagaatg tgctgggaag cctgggggga
    11101 ctgcaatcct caatccaaac cgagtggaaa aagcaggaaa aagatttcca gcagtttggc
    11161 aaagatgttt gtagccgcgt tgtgactctg gaagatagcc gcaaagccct agtcgggaat
    11221 ttaaaataat cctctatttt aagacggcat aatacttttt tatgccgttt aattcttcgt
    11281 tttgttacct gcctctaact ttgtagatct ccaaaatata ttcacgttgt aaattgttta
    11341 acgtcaaatt tcccatacag agctaaggga taatgcgtag cgttcacgta actggaggaa
    11401 tgaaatggag tttttcaaaa agacggcact tgccgcactg gttatgggtt ttagtggtgc
    11461 agcattggca ttacccaata tcaccatttt agcaaccggc gggaccattg ccggtggtgg
    11521 tgactccgca accaaatcta actacacagc gggtaaagtt ggcgtagaaa atctggttaa
    11581 tgcggtgccg caactgaagg acattgcgaa cgttaaaggc gagcaggtag tgaatatcgg
    11641 ctcccaggac atgaacgatg atgtctggct gacactggcg aaaaaaatta acaccgactg
    11701 cgataaaacc gacggcttcg tcattaccca cggtaccgac acgatggaag aaaccgctta
    11761 cttcctcgac ctgacggtga aatgcgacaa accggtggtg atggtcggcg caatgcgccc
    11821 gtccacgtcc atgagcgcag acggtccatt caacctgtat aacgcggtag tgaccgcagc
    11881 tgataaagcc tccgctaatc gtggcgtgct ggtggtgatg aacgacaccg tactggacgg
    11941 tcgcgatgtc accaaaacca acaccaccga cgtagcgacc ttcaagtctg ttaactacgg
    12001 tcctctgggt tacattcaca acggtaagat tgactaccaa cgtaccccgg cacgtaagca
    12061 caccagcgac acgccgttcg atgtctctaa gctgaatgaa ctgccgaaag tcggcattgt
    12121 ttataactac gctaacgcat ccgatcttcc ggctaaagcc ctggtagatg cgggctatga
    12181 tggcatcgtg agctctggtg tgggtaacgg caacctgtat aaatccgtgt ttgacacgct
    12241 ggcgaccgcc gcgaaaaacg gcactgcagt cgtgcgttct tcccgcgtac cgacgggcgc
    12301 taccactcag gatgccgaag tggatgatgc gaaatatggc ttcgtcgcct ctggcacgtt
    12361 gaacccgcaa aaagcgcgcg ttctgctgca actggctctg acgcaaacca aagatccgca
    12421 gcagatccag cagatcttca atcagtacta atcacctcgc cccggtatcg tgccggggct
    12481 ttttcacttc agacttacgt ccattgccaa ttttcattac cctgatgata atcaccggaa
    12541 taaattattc cgcgcgaggg ttttcgggtg aaaaagcaat ggattgttgg cacggcgctg
    12601 cttgtgttga tgactggtaa tgtctgggca gatggcgaac cgccaactga aaatatctta
    12661 aaagatcaat tcaaaaagca gtatcacggc attctcaagc ttgatgccat caccttaaaa
    12721 aatcttgatg ctaagggtaa tcaggccacc tggtcagcgg aaggcgatgt ctcttccagt
    12781 gacgatctct atacctgggt cggtcagttg acagattatg aactgctgga gcagacctgg
    12841 acgaaagata aagcggtaaa attctcggcg atgttaacca gtaaaggaac gcccacgtct
    12901 ggctggtcgg tgaactttta ctcttttcag gcggcagcca gcgatcgtgg tcgggtggtc
    12961 gacgatatca aaacgaataa taaatatctg atcgtgaata gcgaagattt caattatcgc
    13021 tttagtcagc ttgaatctgc gttgaatacc cagaagaact cgattcctgc gctggaaaag
    13081 gaagtgaaag cgcttgataa gcaaatggtg gcggcgcaga aagcagcgga tgcatattgg
    13141 ggaaaagatg taaacggtaa gcaaatgacc cgcgaagaag cctttaaaaa aattcaccaa
    13201 cagcgtgatg agtttaataa acagaatgat agcgaggcgt tcgcggttaa atatgacaaa
    13261 gaggtttatc aaccggcgat tgcggcatgt cataaacata gtgaagagtg ttatgaagtg
    13321 ccgattcagc agaaacgaga tttcgatatc aacgaacaac ggcgacagac ttttctgcaa
    13381 tcacaaaaac tcagccgtaa attgcaggat gactgggtaa cgctcgaaaa agggcaatat
    13441 ccgttaacga tgaaagtttc agaaataaac agtaaaaaag tcgcgatttt gatgaaaatt
    13501 gacgatatca accaagctaa tgaacgctgg aaaaaagata ccgaacaact gcggcgcaat
    13561 gggatgatta agtaactcat gttaagtgcc tttgccggat aatataaaaa gttatccggc
    13621 aaattatttt ttacattag
//
LOCUS       DAJVTL010000114        13571 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.116, whole genome shotgun sequence.
ACCESSION   DAJVTL010000114 DAJVTL010000000
VERSION     DAJVTL010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13571
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.116"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1211)
                     /locus_tag="OQQ26_003273"
     CDS             complement(<1..1211)
                     /locus_tag="OQQ26_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708726.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HCS1858628.1"
                     /translation="MDSYIAITLFGCFFVLVFIGVPISFSIGIATVASMLLMFPWDIA
                     AITVSQRLANGLDNFALLAIPFFIFAGTLMNSGGIAIRLINLAQVMVGRVPGSLGHVN
                     VLANMMFGSISGSAVAAAAAVGGTLNPIQTKQGYDPAFSTAVNVSSCITGLLIPPSNV
                     LIVFSLTVGGVSVASLFMAGYLPGILMGLAVMIVCGIIAKRRGYPLSERATFAQACKA
                     FLDALPSLLLVFIVMGGIFTATEASAIAVVYTFILSVLIYREVKWRHLPKLILESVVT
                     TSIVLLLIDFSVGMSWAMTNADIPYMISDALMGISDNPLIILLLINIVLLIVGIFMDM
                     TPAVLIFTPIFLPIAQELGMDPVHFGIMMVANLCIGLLTPPVGSALFVGCSISGVKIQ
                     HLIKPLLPFYAA"
     gene            complement(1211..1714)
                     /locus_tag="OQQ26_003274"
     CDS             complement(1211..1714)
                     /locus_tag="OQQ26_003274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708723.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HCS1858629.1"
                     /translation="MIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPST
                     LTDELARFLMIWVGLLSAAYTVGAQRHLSIDLFALALNKRKQLLLSIVINVLILGFAG
                     SVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGLVMMFYALCFINQSIQQLK
                     QPAQEAS"
     gene            complement(1759..2745)
                     /locus_tag="OQQ26_003275"
     CDS             complement(1759..2745)
                     /locus_tag="OQQ26_003275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016231167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HCS1858630.1"
                     /translation="MKMRSFTRSLVCASLLALVSTGVNAAEKVTLKLAHNLERSHVVH
                     QSFEELAKEVKQLSKGNMVIRIYPSSQMGNARETMELLQNGALDMTKGSASDLESFDN
                     IYAIYNLPFLFKDQAHFNKVVFGEVGKEIMDSTKDKGFFALSAYVVGTRSFYAKKPIT
                     KPEDLKGLKIRVQPSPTTIKMIELMGGSPTPISFGEVYTAMQQGVVDGAENNVPSWVQ
                     TRHIEIAKVFSEDEHASIPDFLVISTKTWNKLTPEQQQILETAAKKSEAYQQKLWEKI
                     DADTRAQAKATGGEIVKVDKAPFRKAVQPLFDDFKKDPKQAALLEKFDNAAQ"
     gene            complement(3055..4191)
                     /gene="hemW"
                     /locus_tag="OQQ26_003276"
     CDS             complement(3055..4191)
                     /gene="hemW"
                     /locus_tag="OQQ26_003276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HCS1858631.1"
                     /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     CDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
                     GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
                     NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
                     DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
                     RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLC
                     EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAG"
     gene            complement(4184..4777)
                     /locus_tag="OQQ26_003277"
     CDS             complement(4184..4777)
                     /locus_tag="OQQ26_003277"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HCS1858632.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGL
                     TFIENAILKARHAAKVTGLPAIADDSGLAVDVLGGAPGIYSARYSGEDATDLKNLQKL
                     LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(4785..5075)
                     /locus_tag="OQQ26_003278"
     CDS             complement(4785..5075)
                     /locus_tag="OQQ26_003278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417428.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HCS1858633.1"
                     /translation="MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
     gene            complement(5072..5638)
                     /gene="yggT"
                     /locus_tag="OQQ26_003279"
     CDS             complement(5072..5638)
                     /gene="yggT"
                     /locus_tag="OQQ26_003279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic shock tolerance protein YggT"
                     /protein_id="HCS1858634.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT
                     QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
                     LLYVINMGVAEVLQATGNMLLPGLWMAL"
     gene            complement(5656..6360)
                     /gene="yggS"
                     /locus_tag="OQQ26_003280"
     CDS             complement(5656..6360)
                     /gene="yggS"
                     /locus_tag="OQQ26_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate homeostasis protein"
                     /protein_id="HCS1858635.1"
                     /translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA
                     EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
                     RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYSKK"
     gene            6378..7358
                     /locus_tag="OQQ26_003281"
     CDS             6378..7358
                     /locus_tag="OQQ26_003281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HCS1858636.1"
                     /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDV
                     EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQ
                     LEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
                     YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVGKQEGRVAL
                     FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQRVGEGRL"
     gene            complement(7534..7950)
                     /gene="ruvX"
                     /locus_tag="OQQ26_003282"
     CDS             complement(7534..7950)
                     /gene="ruvX"
                     /locus_tag="OQQ26_003282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HCS1858637.1"
                     /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
                     ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(7950..8513)
                     /locus_tag="OQQ26_003283"
     CDS             complement(7950..8513)
                     /locus_tag="OQQ26_003283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HCS1858638.1"
                     /translation="MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLE
                     NLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDN
                     TVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKT
                     PIADRWREAAKLIGVDILTMPGVAGHA"
     gene            complement(8622..9572)
                     /gene="gshB"
                     /locus_tag="OQQ26_003284"
     CDS             complement(8622..9572)
                     /gene="gshB"
                     /locus_tag="OQQ26_003284"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HCS1858639.1"
                     /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
                     LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYIL
                     ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
                     PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP
                     VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
                     DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
     gene            complement(9585..10316)
                     /gene="rsmE"
                     /locus_tag="OQQ26_003285"
     CDS             complement(9585..10316)
                     /gene="rsmE"
                     /locus_tag="OQQ26_003285"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003853382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HCS1858640.1"
                     /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
                     GSNQVFDAEITSASKKSVKVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
                     AEHDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
                     PRVLRTETTALTAITALQVRFGDLG"
     gene            complement(10396..11103)
                     /gene="endA"
                     /locus_tag="OQQ26_003286"
     CDS             complement(10396..11103)
                     /gene="endA"
                     /locus_tag="OQQ26_003286"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HCS1858641.1"
                     /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG
                     TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
                     AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
                     QGNHNPYVQRACQARKS"
     gene            complement(11198..11695)
                     /locus_tag="OQQ26_003287"
     CDS             complement(11198..11695)
                     /locus_tag="OQQ26_003287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HCS1858642.1"
                     /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
                     TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
                     MESVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE
                     QLVAK"
     gene            complement(11772..13166)
                     /gene="galP"
                     /locus_tag="OQQ26_003288"
     CDS             complement(11772..13166)
                     /gene="galP"
                     /locus_tag="OQQ26_003288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/proton symporter"
                     /protein_id="HCS1858643.1"
                     /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA
                     DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL
                     GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
BASE COUNT         3454 a         3420 c         3415 g         3282 t
ORIGIN      
        1 gcagcataaa atggcagcaa tggtttgatt aaatgttgaa tcttcacacc cgagatagaa
       61 caaccaacaa atagcgcact acccaccggc ggtgttaaca gcccaataca aaggttggcc
      121 accatcataa taccgaaatg tactgggtcc attcccagct cttgtgcaat cggcaagaag
      181 atcggtgtaa agattagtac agccggtgtc atgtccataa agatgccgac aattaataag
      241 acgatattaa tcagcagcaa tatgatcagt gggttatcag aaatccccat caatgcgtcg
      301 ctgatcatat aaggaatatc agcattagtc attgcccagg acatgcccac ggaaaaatcg
      361 atcaacagta atacaatcga agtggtaaca accgactcca gaatcagttt gggtaaatgg
      421 cgccatttta cttcccggta aatcagcacc gagagaataa atgtgtagac aacggcaatt
      481 gctgacgctt cagttgcggt aaaaatgccg cccatcacaa tgaacaccag aagcaaactt
      541 ggtaaggcat ccagaaacgc tttacaggcc tgagcaaagg ttgctctttc tgaaagcggg
      601 tagccacggc gtttagcaat aatgccgcag actatcatta ccgcaagacc cattaagatc
      661 cctggcaaat atcccgccat aaatagcgat gctacagaaa cgccgccaac tgtcagggaa
      721 aacacaatta acacgtttga gggcggtatc agtaatccag taatacaaga tgagacgttt
      781 acagcggtag aaaatgccgg atcataacct tgtttggtct gaatgggatt cagtgtgcca
      841 ccaacggcag cagctgccgc aacggctgaa ccagaaatgg aaccaaacat catattcgcc
      901 aggacgttca catgaccaag tgaaccagga acccgaccaa ccattacctg ggcgaggtta
      961 atcaaacgta tcgcaatacc gccgctgttc atcagcgttc cggcaaagat gaaaaagggg
     1021 attgccaata gggcaaagtt atccagtcca ttagccagtc gctgcgaaac agtgattgcc
     1081 gcgatatccc agggaaacat caaaagcatt gaagctacag tggcaatacc gattgagaac
     1141 gaaatgggca caccaataaa gaccagcaca aaaaaacagc caaacagtgt aatcgcgata
     1201 taactatcca ttaactggcc tcctgcgcag gttgtttcag ttgttgaatg ctttgattaa
     1261 taaaacacaa ggcataaaac atcatcacca atccacttaa tggcagaatg atatatacgt
     1321 atcccatcgg tatttgcatc gcggcagata cctgtgatgt tgccagcgtt ttatcaatta
     1381 atttcaggcc accagtcaca atgaccgaac cggcaaaacc taaaataaga acgttaatga
     1441 ctatactaag aagtaattgc ttgcgcttat tcagggcgag agcaaataaa tcgatagaga
     1501 gatgtctctg cgcgccgacg gtatatgcag cacttaataa tcctacccag atcatcaaaa
     1561 agcgtgccag ctcatcggtt aatgtacttg gctggttaag tacgtagcgg ctaaatactt
     1621 gccagactac gcatacaacc agagcaagca tgacggcgac agaaaacgcg gcaatgacgc
     1681 ggtctaccgc aagtttcagg cggttaaata tcattgtaag catcctggaa aatcagggcc
     1741 agagactggc ccggaatatt attgagcagc gttgtcgaat ttctctaaca aagcagcttg
     1801 ttttggatct tttttgaagt cgtcaaacag aggttgcacg gctttacgga atggcgcttt
     1861 atccactttt acaatttcac cccccgtagc tttcgcctga gcacgtgtgt cagcgtcaat
     1921 tttttcccac aatttttgtt gataagcttc ggatttcttc gctgctgttt cgaggatttg
     1981 ttgctgttct ggggttaatt tattccatgt tttggtggag ataaccaaaa agtcaggaat
     2041 tgaggcatgt tcatcttcag aaaagacttt ggcaatttcg atatgtcgag tctgcaccca
     2101 ggaaggcacg ttattttctg cgccatctac tacaccttgc tgcatcgcag tataaacttc
     2161 gccaaatgaa attggagtgg gggagccacc catcagttca atcattttga tggtggtcgg
     2221 gcttggctga acacgaattt tcagcccttt aagatcttct ggcttagtaa tcggtttttt
     2281 cgcatagaaa ctgcgtgtac ccactacata agctgataaa gcaaaaaagc ctttgtcttt
     2341 tgttgagtcc ataatttctt taccaacttc accaaaaaca actttgttga agtgagcctg
     2401 atctttaaat aagaacggca aattatagat agcataaata ttatcaaaag actccagatc
     2461 actggcggaa cctttggtca tatccagagc accattttgc aacaactcca tagtttctcg
     2521 cgcattaccc atctggctgc tgggataaat acggatcacc atattacctt ttgacagctg
     2581 ttttacctct ttcgccagct cttcaaaact ctgatgtaca acatgacttc tttccaggtt
     2641 gtgtgctaac tttaacgtca ctttttctgc ggcgtttacg ccagtgctaa ccagagccag
     2701 caaggatgca cagactaatg agcgggtaaa tgacctcatt ttcataaaaa aactccctgt
     2761 tgaaggatgg aaattggttg atatctaatt gtgcttatca gtgttttgtg cgacaaattg
     2821 gttaacctgt ctgacaactt gtctatgttt atcacaactt gaaataaagt cagaaattaa
     2881 atattaaatt tgtgcgccag gttgtacatg tttataatca ataaatgacg agtaaatatt
     2941 cactatatat atataataaa tatcgtcgat atttattcag taagaaatat attttgccga
     3001 agttaattaa cgggggggaa gaagtgatta atgcgcccgc agacgcatta atgattaccc
     3061 agcgaggaat aattcaagaa gtgagtttaa gaataattta ccatgttccg ttatctgcca
     3121 gtaatccgca cattcggtga gataaccctg ggcaatcgcc tcgtctaact gtgggcgaat
     3181 cacatcttcg caaagcccgg tatacgcaat aaactccacg cgcggcgcgg cctccagcag
     3241 acggaagcga ttcataaaga actcaaacgg cttatctgcg gcttcgacat cacgctggct
     3301 ttccagatac cttccttgca taaaaccacg aggatgacgc gttttagtgg tacgcagaat
     3361 gcgcccatcc gggaaggtga ctttgccgtg cgcgccgcag ccaataccga tgtagtcacc
     3421 aaatcgccag tagttgagat tgtgctggca ctgataaccg ggtttggcgt aagcggaagt
     3481 ttcatattgc tgataacccg ctgcggttaa taactgatgc ccctgttcga aaatatccca
     3541 cagcgcgtca tcgtccggca gcaccggtgg tcgcgaacca aacagcgtat tgggttcgat
     3601 ggtcagttga taccaggaaa gatgcggcgg attcagttca atggcctggc gtagatcgcc
     3661 aagcgcctct tccagtgatt gatccggtag tccatgcatc aaatcaaggt taaagctacg
     3721 taaccctaaa ccgctcgcca gctttgccgc tcgtttcgct tcttgcgggc catgaatgcg
     3781 cccaagtcgt ttcagctttt cttcgctaaa actctgcaca ccaatagaga tgcggttcac
     3841 accagcacgc tgataatcga caaagcgatc ggcttctacc gtaccagggt tcgcttccat
     3901 agtaatttct gcatccgctg ccagcggcaa acgcgcacgc acgccgtcca gcagcgtttg
     3961 catcgccggg ccggaaagca ggctcggcgt accaccgcca ataaagattg tctttacttc
     4021 acggccctga gcgtaagcca catcgttgtc cagatcgcaa agcagatgct gaacgtaatc
     4081 gtcgtgcggc acttctcctt tcaacgcgtg agagttgaaa tcgcagtacg ggcatttctg
     4141 cacgcaccac gggatgtgaa tgtagagact cagcggcggt aatttaacca ttacgtaaag
     4201 cgtccaacag cagtttcaat gcctgaccac ggtgggaaat ggcgctcttt tcttcgcggg
     4261 tcagttcggc agcggttttc ccttcggaag gtacgaagaa gattggatca taaccaaagc
     4321 caccagtgcc cgctggttca cgagtaatca cgcccggcca gctaccgtgg cacaccagcg
     4381 gagtcggatc ttccgcgtga cgcagatata ccagcacgca gtggaaacgc gcctgacgtt
     4441 ggtcgtccgg tacgtctttc agtgtttcca gtagtttttg cagattcttt agatcggtcg
     4501 cgtcttcacc ggaataacgc gcggagtaaa tgcccggcgc gccgccaagc acatctaccg
     4561 ccagaccaga gtcgtcggca attgccggta aaccggtcac ttttgccgca tggcgcgctt
     4621 tcagaatcgc gttttcgata aaggtcaggc cggtttcttc agcggaatct acgccgaggt
     4681 ctgtttgggc cacgatatca agaccgaagt cgctaagcag cgacgccagc tcacgcactt
     4741 taccggcatt gccggttgcg aggacaactt tttgcatagg atacctaatt aattaacgcc
     4801 gcgatttctg gcgggatttg ttgcggatta atgattttaa tttgtttgtg gcggccaagt
     4861 tcgccttttt caatcaccac ctggcttttg gcaacccgga attgcttacc gagaaacttc
     4921 accagatggc tgttggcctg gccgtcaacc ggcggcgcgg taatggcgac tttaacttcg
     4981 tcgccatgta aaccgacaat agaatcacgg ctggctttcg gctgaatata gagccgtaaa
     5041 accagaccgt catcattaac tgttacggca ctcataacgc catccacagc cccggcagca
     5101 gcatgtttcc ggttgcctgt aatacttctg cgacacccat attgatgaca tacagcagca
     5161 gaacgaggat catcggcgag aaatcaatcc cacccattgc cggtagcagg cggcgaatcg
     5221 ggcgcagcag cggatcggct agctgaatca gcacgtattc aatcgggcta cgaccctggc
     5281 ttacccagct cataatcgcc atcaccagca ggacccagaa aatcagcagg ccgatggttt
     5341 tcagcagaat cagtaaaccg gcaatccaga tgattggcag gaaggtaacc actttaaaca
     5401 gcacgatggc tttgatgaaa ctgagaatgt acgcaaccag cagcgaggca ctatcaatgg
     5461 gtcccattgc cggaataacg cggcgcagtg gcccgataat tggctgcgtt accttcacta
     5521 caaactgtga gaaggggttg taaaaatcac aatgagccca ctgcatccag atgcgtaata
     5581 acagcaccat ggtatacagc tcaatgaccg ttgaaagcag gaaagtcaac gtattcatgg
     5641 cgttccttta attccttatt ttttagagta atcacgcgca ccaaaaattg cagtgccgat
     5701 acgaaccatc gtgctacctg ccgcaatggc ggcttccata tcgtccgaca ttcccagaga
     5761 gagcgtgtcg atatgcgggt agcgcgtttt cagtccggca aatgctacag ccatttggcg
     5821 tgcaacttca aactgcctta catattctga ctcaggcgca gggattgcca tcagcccgcg
     5881 cagacgtaaa cgcggtagtt cagcgaccgc cgctgccagc tcgtccagtt ctgccagttg
     5941 aatcccggac ttactgtttt catcactaat attaatttga atcagtacgt taagaggggg
     6001 aagttctgcc gggcgctgat cgttgaggcg ggtagcaatg cgcaaacggt cgatggtatg
     6061 acaccagtcg aaatgctctg ccaccaggcg gcttttatta gactgcaacg ggccaataaa
     6121 atgccattct aatcctgtta cgcccagttc ctgaaagtgg cgaattttat ctaccccttc
     6181 ctgaacgtag ttttcaccaa attgacgctg cccggcatca atggcttctg cgatggcgct
     6241 cgcaggtttt gttttactga ctgcaagcag cgtaatttct tctggagaac ggccgcaacg
     6301 cgttgcagcc gctgagattt tgtcccggac ctgtgccagg ttatgcgcaa tatcgttcat
     6361 tttccgagga tcttagtatg aatatggaag aaattgtggc ccttagtgta aagcataacg
     6421 tctcggatct acacctgtgc agcgcctggc ccgcacgatg gcgcattcgt ggcagaatgg
     6481 aagctgcgcc gtttgatgcg ccggacgtcg aagagctact gcgggagtgg ctggatgacg
     6541 atcagcgggc aatattgctg gaaaatggcc agctggattt tgccgtgtcg ctggcggaaa
     6601 accagcggtt gcgtggcagt gcgttcgcgc aacggcaagg tatttctctg gcattacggt
     6661 tgttaccttc gcactgtcca cagctcgaac agcttggtgc gccaccggta ttgccggaat
     6721 tactcaagag cgagaatggc ctgattctgg tgacgggggc gacggggagt ggcaaatcta
     6781 ccacgctggc ggcgatggtt ggctatctta atcaacatgc cgatgcgcat attctgacgc
     6841 tggaagatcc tgtggaatat ctctatgcca gccagcgatg tttgatccag cagcgggaaa
     6901 ttggtttgca ctgtatgacg ttcgcatcgg ggttgcgggc tgcattgcgg gaagatcctg
     6961 atgtgatttt gctcggagag ctacgtgaca gtgagacaat ccgtctggcg ctgacggcgg
     7021 cagaaaccgg gcatctggtg ctggcaacct tacatacacg tggtgccgcg caggcagttg
     7081 agcgactggt ggattcattt ccggcgcagg aaaaagaccc cgtgcgtaat caactggcag
     7141 gtagtttacg ggcagtgctg tcacaaaagc tggaagtggg taaacaggaa ggacgcgtgg
     7201 cgctgtttga attattgatt aacactcccg cggtggggaa tttgattcgc gaagggaaaa
     7261 cccaccagtt accgcatgtt attcaaaccg ggcagcaggt ggggatgtta acgtttcagc
     7321 agagttatca gcagcgagtg ggggaagggc gtttgtgacg ttgccatgcc cgatgtgcaa
     7381 gcttatcggg cctacaaagg caataaacgt ctgatgcgac gcttgcgcgt cttatcagac
     7441 ctacagccgc tgccagatgt gtgctggata aggcgttcac gccgcatccg gcaagatggc
     7501 ggtaacgact atccgctagg cttttagatc gccttaatat ccctgctcga aatagctttc
     7561 gagaataata accgcagagg cagagtcgac tttgccttta tttagcgccc gatagccgcc
     7621 ctgttcaaac agaccggaac gtgcctccac ggtgctaaga cgctcgtcat ggagctttac
     7681 ttcaacaccg aaacgaccat gaatacggtt ggcaaatttg cgcgctctgg cggttaacgg
     7741 ctgttcggtg ccgtccatat tcagcggcaa accgacgatg atttcgtcag gctgccactc
     7801 tttcagtaaa cgctcgatga ggttccagtc cggcgtaccg tcctgcgctt taattgcagg
     7861 caaagggcga gcggtgccgg taatgcgttg gccgaccgct acgccaatgc ttttggtgcc
     7921 gaagtcgaag gcgagtaagg ttccactcat caggcgtgcc ctgccacacc aggcatggtg
     7981 agaatatcca caccaatcag ttttgccgcc tcgcgccagc ggtcggcaat cggcgttttg
     8041 aacagaatat tcagatctgc cggggcggtt agccacgcgt tatcgagaat ttcttgttcc
     8101 agttgacctt tttcccagga ggcatagccc agagccacca atacgtcaga cggttgttta
     8161 tcggtgccga gcgtttccag cacatcgcgg gaagtggtca tcaccgtgtt gtctgaaatg
     8221 cgaatgctgg aagcaaaatt ggagggcgga gtatgcaaaa taaacccgcg atcttcagcc
     8281 agtgggccgc cgagcataac cggtttatcc agacggattg attcatcacg cggctccggc
     8341 gtgatcttca gcttttccag aatcccttca attttgagat tttccagcgg tttgttgacg
     8401 atgatcccca ttgcaccatt ggtattatgt tcgcaaatgt agaccacgga acgacggaaa
     8461 atcggatcct ggagagcagg catggcaata agaaagtgat gctgtaaatt cattgtcaga
     8521 ggttctgttt cctggttcaa aaaagcaaca gcgcccagta tgcgtggaaa gaagggcgct
     8581 gtcactcaga gtctcaacga gatccttctc gctaaggtgg gttactgctg ctgtaaacgt
     8641 gcttcgatgg catccattag cattccggtg atcgacaccg gaaactctgc ttcaatctca
     8701 cgaatacagg ttgggctggt gacgttaatt tcagtcagac ggtcgccgat gatatccaga
     8761 ccaacaaaaa tcagcccttt ttctttcagc gtcggcccga tctgacgggc gattttccag
     8821 tcactttccg tcagcggacg aggttcaccg cgaccaccgg cagccagatt gccacgggtt
     8881 tcgcccccct gcggaatacg cgccaggcag tacggtacag gctcgccatc caccaccagc
     8941 acgcgtttgt cgccatcttt aatggctggc aggtaatttt gcgccatgca gtagcgagtg
     9001 ccatgctcag tcagggtttc ggcaatcacg ccgaggtttg gatcgccttc tttcacgcgg
     9061 aaaatcgacg cgccgcccat accgtccagc ggcttaagaa tgatgtcgct gtgtttctcc
     9121 cagaacgctt ttagctgcgc tttattgcgc gtaaccagcg tttctggcgt taagtcagag
     9181 aaccaggcgg taaacagttt ttcgttacag tcgcgcaggc tctgcggctt gttaacgatc
     9241 agcgtccctt tctcttcggc acgttccaga atataggtcg cgtagataaa ctcggtatca
     9301 aacggcgggt ctttacgcat caggatcaca tcgagatcgg ccagcggcag atcctgttca
     9361 ccgacgaacg aaaaccactc ttcgtagttc tgcttcacgt tcagcgtgcg ggtatgggcg
     9421 cgggcttcgc cattgatcag atacagatcg cccatctcca tatagtgaag ttcgtaacca
     9481 cgacgctgtg cttccagcaa catagcgaaa ctggaatctt tcttgatgtt gatgtttgcg
     9541 atggggtcca tcacgatgcc gagcttgatc attattcttc tccgttagcc caaatcgcca
     9601 aatcgtactt gtagcgcggt aatggcggtg agcgcagttg tctctgtacg caaaacgcga
     9661 ggtcccaaca ggatatcagt aaattgatag cgggcagtca tggcaatttc atctgccgat
     9721 aaaccgcctt ccgggccaat cagcaggcgg acgcgttcaa ccggtaacgg caacgtattg
     9781 atgctgttac tggcgcgcgg gtgaagattc agtttcagtc cttcatcatg ctctgcacac
     9841 caggcttcca gatccatcgc tggacggatt tccggcaccc gattacgacc acactgctca
     9901 caggcagcaa ttgcaatctt ctgccactgc tggagcttct tgttcagacg ttcactatcc
     9961 agtttaacgc cgcagcgctc agaaaaaagt ggcgtaatga ggcttacacc gagttcgatc
    10021 gatttctgga tagtaaattc cattttttca ccacgcgaca tcacctgacc gaggtgaata
    10081 tgcagcggag attcgcgatc gtcgatctgg ccttccagca ccttcacttt cacgcttttt
    10141 ttgctggcgc tggtaatttc ggcgtcaaag acctggttgc taccatcaaa caattgcaac
    10201 gcctgtcccg gccccatacg cagtacgcgc ccgatatggt tggcggcatc ttcgcaaagt
    10261 gcgatgtgag aatggctggt cagtggttca ggatgataaa tgcgggggat acgcatagtt
    10321 aaaaatccgc gtcgtctccc cacgcggttg tacgcgtggg gtaggggtta acaaaaagaa
    10381 tcccgctagt gtaggttagc tctttcgcgc ctggcaagcg cgttgcacat acgggttatg
    10441 attgccctgc accttagcga tgcgttcatc gcgttcgcac tcccagtcgg taaccggata
    10501 catcttgttc catgcgttga acagctgcgt ttgctggcga gagagtgtca ggttgtattg
    10561 gtcgcgcata tagaagtagg tgcgcgcaat ggcaccgcgt gcacgcgctg gtggttcggc
    10621 agctttttct ttgaaatcga ccttcatggc gcattgaccg tactggcctt cgccgccatt
    10681 ccactggctg tacataaagt tgccgcgatc gccattcacc tcaccgactg acggttgcag
    10741 gttatgcata tcgctttcca tcttgcgata gaccggatct ttagcgcagt ttttacgtcc
    10801 accgtcctgc cagcactggc gctggtgacc gaattgccag gcgggaacga cgtgttccca
    10861 ttctacgcgg ctggcgcggt tttcattttt gcgcacctga tagccgcacg attgcagatc
    10921 aacaacgcct tttttgccct gccagttaat tttacatccg caataaaacg taccgggcgc
    10981 gtcagcgtgg acttttaccg ccgcggcttt cgcctgagaa aaactattga taccttcggc
    11041 caacgccggg ccggaaaatg ctgcgctcag taccaccgca gcaatagaca aataacggta
    11101 catcacttac tccgtgttaa aacgagccag caacgtagcg aaagttgttt tggtatgcaa
    11161 tcagccagat caggaaagtt cctgatagtt caggtggtta tttcgcaacc agctgttcgc
    11221 cgcagtgaac acaccgatag acggcctcgc cacgaactac gcgattatgg cggcgtacag
    11281 taagttgatg ttcctggcac ttacagcggt aggggaaggt gttgcgacgc acggattgca
    11341 gttcgaactg atgcgtacga cgggcgggaa cgcccagcac gctttccatc atccacttcc
    11401 actctttgcc atgtggcgct acgcggccga aatgtttcca taccagcaaa tgtgccagtt
    11461 cgtgcggcac cacttcttca ataaaggctt cactgttttc caacagcaaa acgggattga
    11521 ggcgaatttc atagctttcc agccaggctg ttccggcgga ggttccgcgc tgggtgtaag
    11581 agagttttgg ctccgggtag ttacgcccta gcttcaggtt ggcctgggcg agtttttccc
    11641 gcaggcgacg cataacggcc tgttggatgg cgatagggag acgggatgtt ttcatagcgg
    11701 cagaggatag agcgaagaaa agatgactgc aagaggcggc ttcctccgcg acgggaggaa
    11761 gcctgaggag attaatcgtg agcgccgatt tcgcgcagtt tacgaccttt catcagatta
    11821 cgttcaatat gttccagcga aacgtgtttg gtttccggta ccagccacaa tgtcagcagg
    11881 ataaacagta cgttcagagc cgcatacacc cagaaggtgt tggcgttacc cagcgtgttg
    11941 agcatggtca ggaacgttgc gccaacgatc atgttggcaa tccagttggt ggcggtggag
    12001 caggtgatgc caaaatcgcg gcctttcagc ggctgaattt cggagcacag tacccaaatc
    12061 agcggaccgg cactcatggc aaaaccgaca ataaacatca gcagcatggc gatggcgaaa
    12121 tactgcgccg acggagagtg gataccgata tgcatcattg taccgagtac gcccatgcca
    12181 gcagccatca ccaggaagcc cagcgttagc gttggtttac gtccccagcg gtcaacaagg
    12241 ccgattgcga taaaggtggc aagtacgttg gtcaggccga caatcactgt cccccacatt
    12301 tgctcggtgg tgttggtata acccgccagt tcgaagattt tcggcgcgta atacatgatg
    12361 acgttcatcc cggtgaattg ctgcattacc tgtaacagta cgccaaggaa caccgcgcgg
    12421 cggaagttgc tattctcttt aaacagcgcc cagccactct gtttaacctg caaactttca
    12481 cggatttcat ccagttcgcg tttcgcttcc gcgctggtgt cacgcaggcg tagcagcacg
    12541 cgttcggcat caacaaaacg gcgtttggcg gcaaaccaac gtgggctgtc tggcaggaag
    12601 aagacaccaa tcagcagcaa aattgccggg atgataatca cacccagcat ccagcgccat
    12661 gcaccggtgt agctgaaggc ggtatcagaa agataagcac cgaggatccc gatagtgatc
    12721 atcaactgat acatcgagat catactgccg cgaatttttt ccggcgcaat ttcagagagg
    12781 tacagtggtg cggtataaga ggccacaccc accgccagcc ccagcagaac gcgggaaaga
    12841 atcagtactt caacgtttgg cgcagccgca gagaacagcg aaccggcaac aaacaaaatc
    12901 gcgccgatca tcaggctctt tttgcgcccg agtttaaagg agagccagcc gctgcccacc
    12961 gcaccgactg ccgcaccgaa catcatggag cttacgaccc attcttgcgt gtgcgaagta
    13021 atctggaatt catctgcaat aaacggcagt gcgccagcaa ttacaccgat atccaggcca
    13081 aagagtaatc ccgccagagc ggcaaggaag cagacgaaaa acgtcattgc cttgtttgac
    13141 cgcccctgtt ttttagcgtc aggcatgatg ccctccaata tggttatttt ttattgtgaa
    13201 ttaagatagg tgagtacgac gtaaaaagat gtgaagcaaa tcacatcagt gtaatcgctt
    13261 acactaacat ttatcttagt tatggtttaa gtgcatgaaa ataattgagt tatatcatca
    13321 tagattaaac gctgttatct gcaattaaga ctttactgaa aagaaatgta acaactgtga
    13381 aaaccgaata ataatatgaa aatattacaa atctttgtct gttgtggttg gtgtaatcgg
    13441 tttcagttgt gatgataatt tacggtgaaa cgtgatcagg aagaatgatg ttattgtgca
    13501 ggcggttttt ttgccggatg cggtgtgaac gcctatccac cgcggtgagg taaaagaaaa
    13561 aggccagcgc g
//
LOCUS       DAJVTL010000115        13389 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.117, whole genome shotgun sequence.
ACCESSION   DAJVTL010000115 DAJVTL010000000
VERSION     DAJVTL010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13389
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.117"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..95
                     /locus_tag="OQQ26_003289"
     CDS             <1..95
                     /locus_tag="OQQ26_003289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HCS1858644.1"
                     /translation="TPVEQKQFTSLLMREGIIGLLQRLGIRDSK"
     gene            97..489
                     /locus_tag="OQQ26_003290"
     CDS             97..489
                     /locus_tag="OQQ26_003290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416898.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HCS1858645.1"
                     /translation="MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGG
                     RARLILVDTQVCEFIQNTPAFHNTPMLMEVEERIAEYAPGARAPAYRQIINAIDNMTD
                     IEQEKVAQFLSREGIRNFLARLDIDESA"
     gene            complement(539..1954)
                     /gene="gltX"
                     /locus_tag="OQQ26_003291"
     CDS             complement(539..1954)
                     /gene="gltX"
                     /locus_tag="OQQ26_003291"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HCS1858646.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
                     ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
                     APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
                     FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
                     RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR
                     DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGK
                     TRSIERINKALAFIAERENQQ"
     gene            2213..2288
                     /locus_tag="OQQ26_003292"
     tRNA            2213..2288
                     /locus_tag="OQQ26_003292"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2246..2248,aa:Val,seq:tac)
     gene            2333..2408
                     /locus_tag="OQQ26_003293"
     tRNA            2333..2408
                     /locus_tag="OQQ26_003293"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2366..2368,aa:Val,seq:tac)
     gene            2413..2488
                     /locus_tag="OQQ26_003294"
     tRNA            2413..2488
                     /locus_tag="OQQ26_003294"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2446..2448,aa:Lys,seq:ttt)
     gene            2608..2949
                     /locus_tag="OQQ26_003295"
     CDS             2608..2949
                     /locus_tag="OQQ26_003295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlxA-like family protein"
                     /protein_id="HCS1858647.1"
                     /translation="MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQI
                     KEIVDTSGSAEDKQKQAELIQQQITLLETQLAQLQRQQAEKAQEKEQRLSLNVSLLNP
                     VENTTHIDIYI"
     gene            complement(2940..3874)
                     /locus_tag="OQQ26_003296"
                     /pseudo
     CDS             complement(2940..3874)
                     /locus_tag="OQQ26_003296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416904.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            3964..4962
                     /locus_tag="OQQ26_003297"
     CDS             3964..4962
                     /locus_tag="OQQ26_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HCS1858648.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
                     LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF
                     LYLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS
                     LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
                     GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLGFNKADKITIVFCGSKKSLANG
                     IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSTDKA"
     gene            complement(4959..5177)
                     /locus_tag="OQQ26_003298"
     CDS             complement(4959..5177)
                     /locus_tag="OQQ26_003298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3820 family protein"
                     /protein_id="HCS1858649.1"
                     /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG
                     KLGELMQITLLIKTEGLMQLVQPLKRPL"
     gene            complement(5179..7194)
                     /gene="ligA"
                     /locus_tag="OQQ26_003299"
     CDS             complement(5179..7194)
                     /gene="ligA"
                     /locus_tag="OQQ26_003299"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HCS1858650.1"
                     /translation="MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE
                     LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KSNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPSITAKR
                     PLTFFCYGVGVLEGGELPDTHLGRLLQFKQWGLPVSDRVTLCESAEEVLAFYHKVEED
                     RPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEDTREVVFPTHCPVCGSDVERVKGEAVARCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
                     ESNRNVISELLAEGVHWSAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
                     GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
     gene            complement(7265..8251)
                     /gene="zipA"
                     /locus_tag="OQQ26_003300"
     CDS             complement(7265..8251)
                     /gene="zipA"
                     /locus_tag="OQQ26_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HCS1858651.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR
                     QPVQQPPEAQVPPQHAPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA
                     QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ
                     AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG
                     DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
     gene            8481..9242
                     /gene="cysZ"
                     /locus_tag="OQQ26_003301"
     CDS             8481..9242
                     /gene="cysZ"
                     /locus_tag="OQQ26_003301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HCS1858652.1"
                     /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
                     GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
                     FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIP
                     GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL
                     FTMIPLLNLFIMPVAVCSATAMWVDCYRDKHAMWR"
     gene            9427..10398
                     /gene="cysK"
                     /locus_tag="OQQ26_003302"
     CDS             9427..10398
                     /gene="cysK"
                     /locus_tag="OQQ26_003302"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HCS1858653.1"
                     /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            10782..11039
                     /gene="ptsH"
                     /locus_tag="OQQ26_003303"
     CDS             10782..11039
                     /gene="ptsH"
                     /locus_tag="OQQ26_003303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HCS1858654.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            11084..12811
                     /gene="ptsI"
                     /locus_tag="OQQ26_003304"
     CDS             11084..12811
                     /gene="ptsI"
                     /locus_tag="OQQ26_003304"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HCS1858655.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL
                     SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
                     ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
                     ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMDLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            12852..13361
                     /gene="crr"
                     /locus_tag="OQQ26_003305"
     CDS             12852..13361
                     /gene="crr"
                     /locus_tag="OQQ26_003305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HCS1858656.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVG
                     ETPVIRIKK"
BASE COUNT         3273 a         3451 c         3312 g         3353 t
ORIGIN      
        1 tgacgccagt tgaacaaaaa cagtttacat ccttgcttat gcgggaaggg attatcggat
       61 tgttacaacg cttagggatt cgcgatagca aataatatga aaagattacg caacaaaatg
      121 accaccgaag aactggctga atgcctcggt gtggctaaac aaactgttaa ccgttggatc
      181 agagaaaaag gctggaaaac ggaaaaattt cccggcgtga aaggcggtcg tgccagactt
      241 attctggtcg atacgcaagt ttgcgagttt attcagaaca cgccagcctt ccataacaca
      301 ccaatgttga tggaagttga agagagaatt gctgaatacg ctcctggagc acgcgccccg
      361 gcgtatcgac aaatcatcaa cgcgatagat aatatgacag acattgagca ggaaaaagtc
      421 gcgcaatttt tgtcacgtga aggaattcgc aatttcctcg cccgtctcga tattgacgaa
      481 tcagcataaa aaaaacggca ggatattatc tcctgccgtt tatcttttta cacgctaatt
      541 actgctggtt ttcgcgttca gcaataaagg ccagcgcttt gttgatacgc tcaatgctac
      601 gtgtcttacc gatcgcgtga acggtaacgt ccagcgccgg agactgcccc gcaccggtaa
      661 cggcgacacg cagcggcata ccaactttac ccatacccac ttccagctca tccgccgtcg
      721 cctgaatagc gtgatgaacg ttttcagcgg tccagtcagt aatcgcggcc agtttgtcac
      781 gaactacttc cagcggctga cgcgctaccg gacgcagatg ttttttcgcg gcgtcggcat
      841 cgaactcagc aaaatcttcg tagaaataac ggcagctctg tgccatctct ttcagcgtct
      901 tgcagcgttc gcccagcagt ttcaccagat cagccagctg cgggccgtta cgggtatcga
      961 tattttcctg ctcaatgtgc cactgtaagt gagtagcaac atactccggc ggcagcgcgt
     1021 taatgtagtg atggttcagc cacagcagct tgtcggtgtt gaacgcactg gcagatttgc
     1081 taacggcatt cagggtgaag tatttgatca tctcttcacg agtgaagatt tcctgatcgc
     1141 cgtgggacca gcccagacgc accagatagt tcagcagtgc ttctggcaaa taaccgtcat
     1201 cacgatactg cattacgctg accgccccgt gacgtttgga cagttttttg ccgtcatcgc
     1261 cgttgatcat agaaacgtgc gcgtaaaccg gcaccggcgc tttcagggct ttaagaatgt
     1321 tgatctggcg tggtgtgttg ttgatatggt cttcgccacg gataacatgg gtgatttcca
     1381 tatcccagtc atcgacaacc acacagaagt tataggttgg ggaaccatcg gtacggcgga
     1441 taataagatc gtccagttcc tggttgctga actcgatcgg accacggatc tgatcgtcaa
     1501 aaacaacaga accttcctgc gggttagcaa aacgcacgac acacggttca tcatcagcgt
     1561 gatgctcatg gctgtggcgg cagcgaccgt cataacgcgg cttctcacct ttcgccattt
     1621 gttcttcgcg cagcgcttcc aggcgctctt tagagcaata gcatttataa gcagtgccct
     1681 cttccagcat ctgatcgatc actgcgttgt agcgatcaaa acgtttggtc tggtagtacg
     1741 gaccttcatc ccactccagg ctcagccagt tcatgccatc cataatggct tcgatagctt
     1801 ccggcgtgga acgctcaaga tcggtgtctt caatacgcag cacgaactca ccgccgtggt
     1861 tacgtgcaaa aagccaggag taaagagcag tacgcgcgcc gccaacgtgc agatagcctg
     1921 ttgggcttgg cgcgaagcga gttttgattt tcatgaaatg gccttacgtt tagaaagatg
     1981 ccgacaaccg gcaaatcctg gaaaaattga gtgggcgata ttctatcact cccgcctgat
     2041 tcctcaatgt agttcgggtt tctaccttac gcattattgt tttcgttgac aaattgcgca
     2101 acacggtctg ttttgcgatc atcttgctta aatttacgac gaacgaacaa tttctttaga
     2161 aaatgcgttg actcattttg aactctccct ataatgcgac tccacacagc gggggtgatt
     2221 agctcagctg ggagagcacc tcccttacaa ggagggggtc ggcggttcga tcccgtcatc
     2281 acccaccaac tactttatgt agtctccgcc gtgtagcaag aaattgagaa gtgggtgatt
     2341 agctcagctg ggagagcacc tcccttacaa ggagggggtc ggcggttcga tcccgtcatc
     2401 acccaccact tcgggtcgtt agctcagttg gtagagcagt tgacttttaa tcaattggtc
     2461 gcaggttcga atcctgcacg acccaccaat gtaaaaaagc gccctaaagg cgcttttttg
     2521 ctatctgcga tttgtaagat tgatttttct tctcaagttc cttgttcttc tgccgatatt
     2581 acctcgtaca gtgacgagga ctgaacaatg gccactatct cttcaacttc aattccttcc
     2641 atacaaacac agagtagtaa cagggcatca caaggtagcg atgttgcttc acaaatcgcg
     2701 cggataagtc agcaaatcat caaactcact caacaaatta aagagattgt agacactagc
     2761 ggcagtgctg aagacaaaca aaaacaggcc gaattgattc aacagcaaat caccctactg
     2821 gaaacacaac tggcgcagtt gcagagacag caggcagaaa aggcgcagga gaaagagcag
     2881 cgtttgtctc tgaatgtatc ccttctaaat cctgttgaaa atacgactca tatcgatatc
     2941 tatatctgat acaacggatc cccttcccga ccagccatta gcgcattagc gcattgccct
     3001 ggtctcgtac cacgtcccat aacgcttcag cggcggtgga aagtgaacgg ttcttcctgc
     3061 gcaccagcat caactggcgt tcaacaaccg gcgtaatgcg ctttaccacc agtgggctac
     3121 cttcaggcaa tggtagcgcc agtgcgggaa gaatactgat gccgatgcct gcggctacca
     3181 tcgggaacag cgtcgccgga tgtccaatct cctgcacaat attcgcctga atatcattgc
     3241 gcgccagcgc tgcgtcaatc agcggtcggc tgcctgacgc gtaatcctgc aacaccaatt
     3301 tcgctccctg taatgcctgc cagggtacat aatcttccac ggccaaagcg ctatcgcgat
     3361 ggcaaagcag aaagaaaggc tcggaaagaa tcgcttcaca ttgcagatcg cccactgggc
     3421 ctggatcgat gacgatgcca aaatcgacat ctccctggcg aatactttcc attacccact
     3481 gctgcggacg atcgtgcagg acaaactgaa tatctggata gcggcgatgg ctttcagcaa
     3541 tgcattgcgg aataagatgc gcggaaatgg tctggctggc agcgacccga acttttccgc
     3601 tcagttgttg ccccatacgc ccggtatcgc gcaacgtgct gttcagttca tcgagcagtc
     3661 gctcaagacg caaagccaac tgctgccctg catctgtaag caccacttca cgcgtggttc
     3721 tgtccagcag gcgaatacca gtatgatttt ccagttcctt cacactgtga ctcactgccg
     3781 actggctcag gccgatacgc tctcctgcac gactaaaact tttctcctga gctactgtga
     3841 cgaaaacctt taattgtttt aaagaataat tcatctgttt tcttcatgaa tggatgcaat
     3901 aaatcaattt tatttctcaa actggaagaa gcacaataga accatcgatc atctggagtc
     3961 tttatgaaac tttttcgtat cctcgatcct ttcaccttaa ccctgatcac ggtggtgttg
     4021 ctggcctctt tctttccggc cagaggcgat ttcgtcccct tctttgaaaa tctgaccacc
     4081 gcagcgattg ccctgctgtt ctttatgcac ggcgcgaagt tgtcgcgtga ggcgattatt
     4141 gctggcggtg gccactggcg actgcatttg tgggtaatgt gcagcacctt cgtgctgttt
     4201 ccgattctgg gtgtactgtt tgcctggtgg aaaccggtaa atgtcgaccc gatgctctac
     4261 tccggttttc tctacttgtg cattctcccg gctaccgtgc agtctgcaat cgccttcacg
     4321 tcaatggcgg gcggtaacgt cgcggcggcg gtttgttctg cgtcagcatc cagcctgctg
     4381 gggattttcc tttcaccatt gctggttggt ctggtgatga atgttcacgg tgcagggggc
     4441 agccttgagc aggtcggtaa aattatgctg caactgctgc tgccgtttgt gttggggcat
     4501 ctttcccggc cgtggattgg tgactgggtg tcgcgcaata aaaaatggat tgcgaaaact
     4561 gaccagacgt ccattctgtt ggtggtttat acagcgttca gcgaagccgt cgttaatggt
     4621 atctggcata aagttggctg gggatcattg ctgtttatcg tggtggtcag ctgcgttctt
     4681 ctggctatcg tgattgtagt taacgtcttt atggcacgcc gactgggctt caataaggca
     4741 gataaaatta ctatcgtctt ttgtggttcg aaaaagagtc tggcaaatgg catcccgatg
     4801 gcaaacattc tgttccccac atcggtgatc ggtatgatgg tgctgcccct gatgattttc
     4861 catcagatcc aattgatggt ctgtgcggtg ctggcgcgtc gatacaaacg ccagaccgaa
     4921 cagttacagg cgcagcagga aagcagcacc gataaagctt aaagcggacg cttcaggggc
     4981 tggaccagtt gcatcagccc ctcggtttta atcagcagcg tgatttgcat tagctcaccg
     5041 agcttccctg ccgggaactc atctttgcgg gcaaaccaca gcagatactc ctccggcagg
     5101 tcgattaagc gacgcccttt gtatttgcca aacggcatta tcgtattggc tatttcaatc
     5161 agctgctctt tttccatctc agctacccag caaacgcagc atttccgctt cgtcgatgac
     5221 ttcaatgccc agttcctgcg ccttcgccag tttagatcct gcagcttcac ccgctatcac
     5281 cagatcggtt ttcttcgaca cgctgcccgc gactttcgcg cccagttcga ccagtcgagc
     5341 tttagcgtca tcacgcgaca tctggcttaa gctgcccgta agcaccacgg ttttaccagc
     5401 aaacgggctg tcaatctctt ccgcgttgat aacgatcggc gcagaccagt gaacaccttc
     5461 cgccaacagc tcgctgatga cattgcggtt gctttcttcg gcaaagaagt tgtgaacgtg
     5521 ggatgcaacg acaatgccaa catcaggcac cttttgcagc tcttcaatcg aagcagcttc
     5581 cagcgcttcc agcgtgccga aatatgccgc cagacctgct gcggtggcct cgccgacttc
     5641 acggatgcca agtgcataga ggaagcgagc aaaggtggtt tctttcgctt tttccagcgc
     5701 gttaaccacg ttttgtgccg attttggccc catacgctcc agtccggtaa gtttgcctgc
     5761 ggtgagtttg aacagatccg ccggagtgtg gacatattct ttttcaacca gctgatcgat
     5821 gattttgtcg cccattccgt caacatccat cgcacggcgg gaaacaaagt gtttcagcga
     5881 ctctttacgc tgcgcaccgc aaatcagacc accggtacag cgggcaaccg cttcaccttt
     5941 cacacgctca acgtcagaac cacataccgg acaatgcgtc gggaatacaa cctcacgggt
     6001 atcttccggg cgttcagaaa gcacgacgtt aaccacctgc gggatcacgt cgccagcgcg
     6061 gcgaatcacc actttatcgc caatgcgtaa accaagacgt tcgatttcat ccgcattgtg
     6121 taaggttgcg ttactcacca gcacgcctgc aacatggaca ggttccagac gcgcaacagg
     6181 cgtaatcgcg ccagtacgcc caacctgaaa ctcgacgtca cgcacaaagg tcatctgttc
     6241 ctgcgccggg aatttaaacg ctaccgccca gcgcggggct cgcgcgacaa agccaagctg
     6301 ctcctgctgt gccagtgagt tgaccttaat caccacgccg tcaatatcaa agcccagcgt
     6361 cgggcggtct tcttccactt tgtgatagaa cgccagcact tcttccgccg attcacaaag
     6421 cgttacccga tcgctaaccg gcaaacccca ctgtttaaat tgcagtaaac ggccaagatg
     6481 agtatccggc agctcgccac cttccagaac accaacgcca tagcagaaga aagtgagcgg
     6541 ccgcttcgct gtaatactcg gatcaagctg acgcagtgaa ccagctgccg cattacgtgg
     6601 gttagcaaac actttcccgc ccgtgcgtcg cgcatcttcg ttaatctttt cgaaccccgc
     6661 ctgcggcagg aacacttcac cacgcacttc cagacgcgcc gggatattct ctccgtgcag
     6721 cttcagcgga atggcgcgaa tagtacgcac attagacgtg atatcttccc cggtggtgcc
     6781 atcgccacgg gtcgcggcac tgactaaaac gccattttca tacagaatac tgacggcaag
     6841 gccatccagc ttcagctcac agcaccaggt gactttctcg ttgcttttca gacggtcctg
     6901 cacacgtttg ttgaaagcaa gaaagctttc ttcatcaaaa acgttatcca gcgacaacat
     6961 tggtacttca tggcgtatct ggctgaaagc cgccagcggc gcagcaccta cacgttgggt
     7021 aggcgaatca ggcgtaatca gttctggatg tttggtttcc agctcgcgca gttcgcgcat
     7081 cagcctgtcg tattcagcgt cgggaatttc cggcgcatcc atcacatgat aaagatattc
     7141 atgatggcga agcgtcgttc gcagttctgt cagttgttgt tcgattgatt ccatatcgca
     7201 ccatcaatgc taaaaacccc cgacaagcgg gggttcgaag aggagttaat tcgccttaag
     7261 tgtatcaggc gttggcgtct ttgacttcgc ggatgatgtc ctggtactcg cgcaatttct
     7321 gcggagtcat catacggcgc tgatcgtcaa gcacgacacc gcccacttca tcggcaatat
     7381 gctgcgcaga ttgcagcatc agcttgaagt tctgcagctc gtcaccgtaa gacggtacct
     7441 gcataaagat agtgacaccc ggagtagtga aatccttcat ttcaggatca aaggttcccg
     7501 gtttcaccat attcgccagg ctgaataacg ccgggccgct gccatccggg ctaagatgac
     7561 gatggtaaat attcatatcg ccaaaaatga agcccgcttg ttgaatgctg ttaagaagca
     7621 gttcaccgtt tagctcgcta ccgtgatgcg ccgcgacgtt catgataatc accgcttctt
     7681 tgcgcttcgg tttatccata actggagccg gttccgctac aggctcaggc tgtggtgccg
     7741 ctacgggttc tgcaggctgg aaagcctgtt gtgccggttg cggtgctgaa tgcactggct
     7801 gcggcgctgg cgcgacctgt ggcgaaactg gctgctgcaa cggctgttca ggctgcggct
     7861 gataggcagg ttgctgcacc ggctgcgctg gacgcggagc atgttgcggc ggtacctgcg
     7921 cttcaggcgg ctgctggacc ggttgacgcg gctgcgcaga cgcataaggc ggttggtact
     7981 ggtgttgcgg cgacggacga gcagcctcat gctcctgggc gttagccggg gcatgattca
     8041 cgcggtgaac acgaacctca ccaacgccct catcatcttc gacatcctcg tcataagaat
     8101 cgtcgtcacg ttttgacttc attcgtttta atggccgatc gcggaacata gaagatcgtt
     8161 ctttacggct ggtccagaaa ccatgtacca gtaaagcgat tatggcgatc gcgccaacaa
     8221 tgattaatat cagacgcaaa tcctgcatca ttatattctc tgttgttcta acaccttgcc
     8281 accacggcaa acatttactc actaagagta tttgccgatt acctcaagtg caagtgcact
     8341 attaactttc acagcacaaa gatagatgaa atcgtgcttt ttgctgtttt ttcgaacata
     8401 tcctaactgt ccattgcgca attacccggt aaaatacgca caattttcct gggattggtc
     8461 aaaaggagct catcctgatt atggtttcat cattcacatc tgccccacgc agcggttttt
     8521 actattttgc gcaaggctgg aagctcgtct cgcaacctgg gattcggcgt ttcgttattt
     8581 taccgctgct ggtcaatatt ttgttgatgg ggggcgcatt ctggtggctc tttacgcaac
     8641 tcgatgtctg gatcccgact ctcatgagtt atgttccgga ctggttacaa tggctgagct
     8701 atctgttgtg gcctctggct gtcatctctg tgctgttagt gtttggctat ttcttctcca
     8761 cgattgctaa ctggattgcc gctccgttta acggtttatt ggctgaacaa ctggaagcac
     8821 gattgactgg cgctacaccg ccagataccg ggattttcgg tatcatgaaa gatgtgccgc
     8881 gaatcatgaa acgcgaatgg caaaaatttg cctggtatct gccgcgcgca attgtattgc
     8941 taattcttta cttcatccct ggtattgggc aaaccgtcgc gccggtactg tggttcctgt
     9001 ttagcgcctg gatgttagcc atccagtatt gcgattaccc cttcgataac cacaaagtgc
     9061 cgtttaaaga gatgcgcacc gccctgcgca cacgcaaaat caccaatatg cagtttggtg
     9121 ctttaaccag cctgtttacg atgatcccgc tgcttaatct gttcatcatg cccgttgccg
     9181 tttgtagcgc gacggcgatg tgggtcgatt gctatcgcga taaacacgcg atgtggcggt
     9241 aacaatctac cggttatttt gtaaaccgtt tgtgtgaaac aggggtggct tatgccgccc
     9301 cttattccat cttgcatgtc attattcccc ttctgcatat agatatgcta aatccttact
     9361 tccgcatatt ctctgagcgg gtatgctacc tgttgtatcc caatttcata cagttaagga
     9421 caggccatga gtaagatttt tgaagataac tcgctgacta tcggtcacac gccgctggtt
     9481 cgcctgaatc gcatcggtaa cggacgcatt ctggcgaagg tggaatctcg taaccccagc
     9541 ttcagcgtta agtgccgtat cggtgccaac atgatttggg atgccgaaaa gcgcggcgtg
     9601 ctgaaaccag gcgttgaact ggttgaaccg accagcggta ataccgggat tgcactggcc
     9661 tatgtagctg ccgctcgcgg ttacaaactc accctgacca tgccagaaac catgagtatt
     9721 gaacgccgca agctgctgaa agcgttaggt gcaaacctgg tgctgacgga aggtgctaaa
     9781 ggcatgaaag gcgcaatcca aaaagcagaa gaaattgtcg ccagcaatcc agagaaatac
     9841 ctgctgctgc aacaattcag caatccggca aaccctgaaa ttcacgaaaa aaccaccggt
     9901 ccggagatct gggaagatac cgacggtcag gttgatgtat ttattgctgg cgttgggact
     9961 ggcggtacgc tgactggcgt cagccgctac attaaaggca ccaaaggcaa gaccgatctt
    10021 atctctgtcg ccgttgagcc aaccgattct ccagttatcg cccaggcgct ggcaggtgaa
    10081 gagattaaac ctggcccgca taaaattcag ggtattggcg ctggttttat cccggctaac
    10141 ctcgatctca agctggtcga taaagtcatt ggcatcacca atgaagaagc catttctacc
    10201 gcccgtcgtc taatggaaga agaaggtatt cttgcaggta tctcttctgg agcagctgtt
    10261 gccgcggcgt tgaaactaca agaagatgaa agctttacca acaagaatat tgtggttatt
    10321 ctaccatcat cgggtgagcg ttatttaagc accgcattgt ttgccgatct cttcactgag
    10381 aaagaattgc aacagtaatg ccagcttgtt aaaaatgcgt aaaaaagcac ctttttaggt
    10441 gcttttttgt ggcctgcttc aaactttcgc ccctcatggc attgattcag cctgtcggaa
    10501 ctggtattta accagactaa ttattttgat gcgcgaaatt aatcgttaca ggaaaagcca
    10561 aagctgaatc gattttatga tttggttcaa ttcttccttt agcggcataa tgtttaatga
    10621 cgtacgaaac gtcagcggtc aacacccgcc agcaatgaac tgtattgcgc tcttcgtgcg
    10681 tcgcgtctgt taaaaactgg cgctaacaat acaggctaaa gtcgaaccgc caggctagac
    10741 tttagttcca caacactaaa cctataagtt ggggaaatac aatgttccag caagaagtta
    10801 ccattaccgc tccgaacggt ctgcacaccc gccctgctgc ccagtttgta aaagaagcta
    10861 agggcttcac ttctgaaatt actgtgactt ccaacggcaa aagcgccagc gcgaaaagcc
    10921 tgtttaaact gcagactctg ggtctgactc aaggtaccgt tgtgactatc tccgcagaag
    10981 gcgaagacga gcagaaagcg gttgaacatc tggttaaact gatggcggaa ctcgagtaat
    11041 ttcccgggtt cttttaaaaa tcagtcacaa gtaaggtagg gttatgattt caggcatttt
    11101 agcatccccg ggtatcgctt tcggtaaagc tctgcttctg aaagaagacg aaattgtcat
    11161 tgaccggaaa aaaatttctg ccgaccaggt tgatcaggaa gttgaacgtt ttctgagcgg
    11221 tcgtgccaag gcatcagccc agttggaaac gatcaaaacg aaagctggtg aaacgttcgg
    11281 tgaagaaaaa gaagccatct ttgaagggca tattatgctg ctcgaagatg aggagctgga
    11341 gcaggaaatc atagccctga ttaaagataa acacatgaca gctgacgcag ctgctcatga
    11401 agttatcgaa ggtcaggctt ctgccctgga agagctggat gatgaatacc tgaaagaacg
    11461 tgcggctgac gtacgtgata tcggtaagcg cctactgcgc aacatcctgg gcctgaagat
    11521 tatcgacctg agcgccattc aggatgaagt cattctggtt gccgctgacc tgacgccgtc
    11581 cgaaaccgca cagctgaacc tgaagaaggt gctgggtttc atcaccgacg cgggtggccg
    11641 tacttcccac acctctatca tggcgcgttc tctggaactg cctgctatcg tgggtaccgg
    11701 tagcgtcacc tctcaggtga aaaatgacga ctatctgatt ctggatgccg taaataatca
    11761 ggtttacgtc aatccaacca acgaagttat tgataaaatg cgcgctgttc aggagcaagt
    11821 ggcttctgaa aaagcagagc ttgctaaact gaaagatctg ccagctatta cgctggacgg
    11881 tcaccaggta gaagtgtgcg ctaacattgg tacggttcgt gacgttgaag gtgctgagcg
    11941 taacggcgct gaaggcgttg gtctgtatcg tactgagttc ctgttcatgg accgcgacgc
    12001 gctgcccact gaagaagaac agtttgctgc ttacaaagca gtggctgaag cgtgtggctc
    12061 gcaggcggtt atcgttcgta ccatggacat cggcggcgac aaagagctgc catacatgaa
    12121 cttcccgaaa gaagagaacc cgttcctcgg ctggcgcgct atccgtatcg cgatggatcg
    12181 taaagagatc ctgcgcgatc agctccgcgc tatcctgcgt gcctcggctt tcggtaaatt
    12241 gcgcattatg ttcccgatga tcatctctgt tgaagaagtg cgtgcactgc gcaaagagat
    12301 cgaaatctac aaacaggaac tgcgcgacga aggtaaagcg tttgacgagt caattgaaat
    12361 cggcgtaatg gtggaaacac cggctgccgc aacaattgca cgtcatttag ccaaagaagt
    12421 tgatttcttt agtatcggca ccaatgattt aacgcagtac actctggcag ttgaccgtgg
    12481 taatgatatg atttcacacc tttaccagcc aatgtcaccg tccgtgctga acttgatcaa
    12541 gcaagttatt gatgcttctc atgctgaagg caaatggact ggcatgtgtg gtgagcttgc
    12601 tggcgatgaa cgtgctacac ttctgttgct ggggatggat ctggacgaat tctctatgag
    12661 cgccatttct atcccgcgca ttaagaagat tatccgtaac acgaacttcg aagatgcgaa
    12721 ggtgttagca gagcaggctc ttgctcaacc gacaacggac gagttaatga cgctggttaa
    12781 caagttcatt gaagaaaaaa caatctgcta atccacgaga tgcggcccaa tttactgctt
    12841 aggagaagat catggggttg ttcgataaac tgaaatctct ggtttccgac gacaagaagg
    12901 ataccggaac tattgagatc attgctccgc tctctggcga gatcgtcaat atcgaagacg
    12961 tgccggatgt cgtttttgcg gaaaaaatcg ttggtgatgg tattgctatc aaaccaacgg
    13021 gtaacaaaat ggtcgcacct gtagacggca ccattggtaa aatctttgaa accaaccacg
    13081 cgttctctat cgaatctgat agcggcgttg aactgttcgt ccacttcggt atcgacaccg
    13141 ttgaactgaa aggcgaaggc ttcaagcgta ttgctgaaga aggtcagcgc gtgaaagttg
    13201 gcgatactgt cattgaattt gatctgccgc tgctggaaga gaaagccaag tctaccctga
    13261 ctccggttgt tatctccaac atggacgaaa tcaaagaact gatcaaactg tccggtagcg
    13321 taaccgtggg tgaaaccccg gttatccgca tcaagaagta attcttgccg cagtgaaaaa
    13381 tggcgccca
//
LOCUS       DAJVTL010000116        13281 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.118, whole genome shotgun sequence.
ACCESSION   DAJVTL010000116 DAJVTL010000000
VERSION     DAJVTL010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13281
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.118"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..535
                     /locus_tag="OQQ26_003306"
     CDS             <1..535
                     /locus_tag="OQQ26_003306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110-like element ISSfl4 family transposase"
                     /protein_id="HCS1858657.1"
                     /translation="DIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEV
                     EQRVLAHPLYPVLTSMPGVGVRTAARLLTEVACRAFASAAHLAAYAGLAPVTRRSGSS
                     IRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTRKMSQGKRHNQALIALARRRCD
                     VLFAMMRDGTFYTPQGS"
     gene            700..1182
                     /gene="trmL"
                     /locus_tag="OQQ26_003307"
     CDS             700..1182
                     /gene="trmL"
                     /locus_tag="OQQ26_003307"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000932352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HCS1858658.1"
                     /translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFTAVTRHHDYSAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
                     TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRDQLL
                     "
     gene            complement(1226..2047)
                     /gene="cysE"
                     /locus_tag="OQQ26_003308"
     CDS             complement(1226..2047)
                     /gene="cysE"
                     /locus_tag="OQQ26_003308"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HCS1858659.1"
                     /translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLSSPIMLAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
     gene            complement(2127..3146)
                     /gene="gpsA"
                     /locus_tag="OQQ26_003309"
     CDS             complement(2127..3146)
                     /gene="gpsA"
                     /locus_tag="OQQ26_003309"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HCS1858660.1"
                     /translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
                     ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     QTFADDLQQLLHCGKSLRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLAEMSRLGAALGADPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
                     QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
                     ERSSH"
     gene            complement(3146..3613)
                     /gene="secB"
                     /locus_tag="OQQ26_003310"
     CDS             complement(3146..3613)
                     /gene="secB"
                     /locus_tag="OQQ26_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015369180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HCS1858661.1"
                     /translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
                     DTASTQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
                     PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            complement(3676..3927)
                     /gene="grxC"
                     /locus_tag="OQQ26_003311"
     CDS             complement(3676..3927)
                     /gene="grxC"
                     /locus_tag="OQQ26_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HCS1858662.1"
                     /translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
     gene            complement(4069..4500)
                     /locus_tag="OQQ26_003312"
     CDS             complement(4069..4500)
                     /locus_tag="OQQ26_003312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HCS1858663.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
                     SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
     gene            4745..6289
                     /gene="gpmM"
                     /locus_tag="OQQ26_003313"
                     /gene_synonym="pgmI"
     CDS             4745..6289
                     /gene="gpmM"
                     /locus_tag="OQQ26_003313"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HCS1858664.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
                     VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
                     DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
                     MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            6299..7582
                     /gene="envC"
                     /locus_tag="OQQ26_003314"
     CDS             6299..7582
                     /gene="envC"
                     /locus_tag="OQQ26_003314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HCS1858665.1"
                     /translation="MRGKAINTMTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADE
                     RDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNK
                     QIDEMNASIAKLEQQKAAQERSLATQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
                     GYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKK
                     TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEA
                     TRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIG
                     ASECTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQ
                     PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
     gene            7586..8545
                     /locus_tag="OQQ26_003315"
     CDS             7586..8545
                     /locus_tag="OQQ26_003315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312519.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HCS1858666.1"
                     /translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
                     AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
                     IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALARYNLYFLDSVTIGNTQA
                     MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVL
                     QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNTVPDTPRNPFRGVKLCKPKKPIEPV
                     YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKLNASAN"
     gene            complement(8532..9566)
                     /gene="waaH"
                     /locus_tag="OQQ26_003316"
     CDS             complement(8532..9566)
                     /gene="waaH"
                     /locus_tag="OQQ26_003316"
                     /EC_number="2.4.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronate:LPS(HepIII) glycosyltransferase"
                     /protein_id="HCS1858667.1"
                     /translation="MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDG
                     STDNSVEIAKHYAENYPHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTM
                     YETLMTMALEDDLDVAQCNADWCFRETGETWQSIPSDRLRSTGVLTGPDWLRMGLSSR
                     RWTHVVWMGVYRRDVIVKNNIKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLH
                     NTSVSRLHRQGNKNLNYQRHYIKITRLLEKLNRNYADKITIYPEFHQQITYEALRVCH
                     AVRKEPDILTRQRMIAEIFTSGMYKRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHH
                     RITRSAFNLR"
     gene            complement(9805..10830)
                     /gene="tdh"
                     /locus_tag="OQQ26_003317"
     CDS             complement(9805..10830)
                     /gene="tdh"
                     /locus_tag="OQQ26_003317"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HCS1858668.1"
                     /translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
                     NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
                     KVILSWD"
     gene            complement(10840..12036)
                     /gene="kbl"
                     /locus_tag="OQQ26_003318"
     CDS             complement(10840..12036)
                     /gene="kbl"
                     /locus_tag="OQQ26_003318"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HCS1858669.1"
                     /translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
                     QLGVIA"
     gene            complement(12312..13169)
                     /gene="yibB"
                     /locus_tag="OQQ26_003319"
     CDS             complement(12312..13169)
                     /gene="yibB"
                     /locus_tag="OQQ26_003319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YibB"
                     /protein_id="HCS1858670.1"
                     /translation="MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLA
                     ALENEMIIFTSPDLKPRIETIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRL
                     EPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCRKPNVTRGLK
                     IWDFPFDENKMHLFTIKKGLTVTSQQQAFDFMIGNHVYIIGGAIVGSQHKWKEFYKLV
                     LESQKITLNNNIVDDDQGIFVMCYYKRSDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQ
                     ALRIFLSRK"
BASE COUNT         3375 a         3529 c         3286 g         3091 t
ORIGIN      
        1 agacatagct caggcactgg ccgaacaaac cgtcgtcgtt cccggcacga atgccgctgc
       61 cgtagtactg ccacgtctgg cactccagct catcacgctg cgtaagcaaa gagacgaggt
      121 ggcgcttgag gtagaacagc gagttcttgc tcaccctctt tacccggtcc tgaccagtat
      181 gcccggagtc ggtgtcagga ccgcagccag actcctcacc gaggtcgcct gccgcgcctt
      241 cgcctctgcc gcacatctcg ctgcttatgc tggccttgcg ccggtaactc ggcgatccgg
      301 ctcgtcaata cgcggtgagc atccctcgcg acggggtaat aaagctctca aacgggcgtt
      361 gttcctgtcg gccttcgccg cgctcaggga tccgctctcc agggcttact acacccgcaa
      421 aatgagtcag ggaaaacgac acaatcaggc gcttatcgcc ctggcgagac gacgctgcga
      481 cgttctgttc gccatgatgc gcgacgggac tttttatacc ccgcaggggt cataacatgc
      541 ttgacaactt aataggggca ccccctaacc ctctccctca gggagctgtc tcttgatcag
      601 atctcctgat caagagacag ggggagggcc ggggtgaggg gaaaaggccg cactgctcac
      661 caattttctg ctatcctgcc cccgcactaa gggggcagta tgctaaacat cgtactttac
      721 gaaccagaaa ttccgccaaa tactggcaac atcatccgtc tttgcgctaa taccggcttt
      781 cgtctgcata tcatcgaacc gatgggattt gcctgggacg ataagcgcct gcgccgcgcg
      841 gggctggact atcacgagtt taccgccgtt acgcgtcatc atgactacag cgcgttcctc
      901 gaagcagaaa atccccaacg cctgtttgcc ctcaccacga aaggtacgcc tgctcacagc
      961 gccgtaagct atcaggatgg cgattatctg atgttcggcc cggaaacacg cggccttcca
     1021 gcgagcattc ttgatgccct gcccgctgaa caaaaaattc ggattccgat ggtgccagac
     1081 agccgcagca tgaatctatc caatgcggtg tcggtagtgg tgtatgaagc ctggcggcag
     1141 ttggggtatc cgggagcggt attgagagat cagttactgt aggccggata gatgattaca
     1201 tcgcatccgg cacgatcaca ggacatcaga ttccatcccc atactcaaat gtatggttaa
     1261 taccattgaa atgctggtcc atatccattg atggtttatc gctatccggc ttgccgacaa
     1321 tgcgtgccgg aacgccagcg gcggtggtat gcggcggcac cggttgcagc accacggaac
     1381 ctgcgccaat cttcgcgccg cgaccaactt caatattgcc gagaatcttc gcgcccgcgc
     1441 caatcattac gccttcacga attttcgggt gacggtcgcc gctagttttc ccagtaccgc
     1501 caagcgtcac agattgcaga atcgatacgt cgttttcaat caccgccgtt tcaccaacga
     1561 cgatgcctgt cgcgtggtca agcatgatac cgcgaccaat ttttgctgcc gggtgaatat
     1621 caacctggaa cgtcacagaa acctggtttt gcagaaagat tgccagtgcg cgacgcccct
     1681 gattccacaa ccagtgaccg atgcgatagg cctgcaaggc atgaaaaccc ttcaggtata
     1741 acaacggggt tgagtattta tcgactgccg ggtcgcgggt acgcaccgcc tgaatatcac
     1801 aggccgcaga ggcgatcatt tccgggtcag cggcgtaggc ttcttccacc acttcacgga
     1861 tagcaatagc aagcataatt ggcgatgaca gcttgttcgc cagcatgtag ctcagtgcac
     1921 tgccaaggtt ttcgtgcttg agtagcgtcg cgtggtaaaa actggccagc attggctcac
     1981 agtccgccag cgttctggct tcggctttaa tattgttcca gacaatttcc agttcttcac
     2041 acgacattgc ttactccaca cgatgagata atgaccggcc cgttctgcgc gggccgggtc
     2101 atagcggtaa caaaggttcc ctggggttag tggctgctgc gctcgtcctt gcgtgcacga
     2161 cctaataacg tcaatgctgc ctcgcgcgcg ttttttccgc aatataatac ttgataaatt
     2221 tcctcggtta ttggcatttc aacgccgaag cgatgcgcca gttcgcggac ttctttcgta
     2281 ttgcggtagc cttccaccac ctgaccaatc ttctcctgcg cgctttgtac atccatgccc
     2341 tgaccgagca tcatgccaaa acggcggtta cgcgactggt tgtcggtaca ggtaagcacc
     2401 agatccccca gccccgccat gcccataaag gtggcaggat cggcacccag cgccgcgcca
     2461 agacgcgaca tttcagccag cccacgggtg atcagcgccg tacgcgcatt cgcaccaaaa
     2521 ccgataccgt cggacatccc cgcaccaatg gcaatgacgt ttttcaccgc gccgccaagc
     2581 tgcacgccaa tgaaatccgg attgctgtaa acgcgtaaac ttttgccgca gtgcagcagc
     2641 tgctggagat catcggcaaa ggtctgatcg gtcgaggcca gcgaaatagc tgtcggtaaa
     2701 cctgccgcca gttctttcgc aaacgttggg ccagagataa ccgccagcgg aatttgatcg
     2761 cctaacgcct cgcgggccac gtcctgtaac agacgcccgg tttccgcttc cagccctttg
     2821 gtcgcccaca ccagacgcgc atcaggacgc atcagcggtt taatctggcg cagcacttca
     2881 ccaaagacat ggctgggtac gacgacgaga atattacggc tggctgccag cgcagtggcg
     2941 agatcgcttt caagatggag cgtatcggga aaaggcacat cggggagaaa cgcggcgtta
     3001 cagcggtcgc gttcaagcgt tgcgatatgt tcagggtcat ggccccagag gacaacctcg
     3061 tggccatttc ttgctagggt aatggcaaga gcggtgccgt acgagccggc accgatcaca
     3121 gtcattgaag cattacgttg gttcatcagg catcctgatg ttcttcagta ccttcgccag
     3181 cctgctgctg caaatagttc atgaacagcg catcgaagtt aaccggcgca aggttcagtt
     3241 gcgggaatgt accgcgggat accatgctgg tgatgcactc acgagcatac gggaacagaa
     3301 tgttcgggca gtatgcgccc aggcaatgtg ccatctgggt gccttcgata cccgcgatgg
     3361 agaaaatacc gccctgctga acttcacaca ggaacgcggt ttcttcgccc agggaggccg
     3421 ttacggtaac acgcagtacc acttcgtaaa cgtcatctgc cagttgagta gatgccgtat
     3481 ccagatcaag tttaacttct ggctgccaat ctttctggaa aacgtgcggc gcgttcggcg
     3541 cttcgaaaga aatatccttg gtataaatac gttggatctg gaaagtcatt tcagtgttgt
     3601 tttgttctga catgtgtaga aaacccttaa gtgttgtcct taaatactgc gcaatgtaat
     3661 gccaacgttc acacgttatt tcagcagggg atccagtcca ccacgtgcat ccaatgcata
     3721 caagtcatca cagccgccaa tgtgctgtgc gtcaataaaa atctggggaa ccgtggtgcg
     3781 accgctgcgt ttgatcatct cttcacgctt ggcggcattg ccatcgatcg gcaactcctg
     3841 gaaactcacg cccttgctgc tcagcagtgc ttttgcacga tggcaatacg ggcaggtttc
     3901 tttggtatag atttcaacat tggccataaa ttagctcctg tttttttacc ctgaaatttc
     3961 atgttgcagg gcggcagcaa aatggagtgt ccccagaagc ttataacaat aagtcgctgg
     4021 gggcctaatt gcagcaaacg gcctgcatca tgaaagacga caggtaaatt atttgccgcg
     4081 caccagaggc aagttttcgc cagcccagcc agcaacgccc tctttcagca cgaatacttg
     4141 cgcaaaacca gctttcgtca gcgcgtttgc aggctcctgg cattgcatac cagaaccgtc
     4201 taccacgata accggtttgt ctttgtgctt ctcaagctca ccaacattgt tggctttgat
     4261 ttcgctcggc aacagattga tagaacctgc gatatggcct ttacggaagt catcacgctg
     4321 acgtaaatcc acaaccacag cgtcttcttt gttgatcaga cgcgtagctt caccacgagt
     4381 aatcaccttc actttcgagg tcaggctctt aaacgtagtc acaagaaccg ccaccagtaa
     4441 cgcgatccag gcgatactca gtatgggatg acggccaaca aattgcataa tttcttgcat
     4501 ggggggtaac aactcccgac gtagtgatta aaaaaaccag gaaaggagta tacctgcgcg
     4561 gtgcggcaaa tacagccagc gcgttaactg gaatgcaatt ttgcggggca cgacgaaaaa
     4621 aaagcgcaaa tctggcatcg gcttgccgcg agcggtcgta tattttgatc ttcagaggct
     4681 attttatcga ttcagctgta gtaaaattac gcaaattttg actcttgagt atgaggttgt
     4741 cgcaatgtcg gtttctaaaa aacctatggt actggtgatt ctggatggct atggctatcg
     4801 tgaagaacag caggataacg ccatttttag tgctaaaacc ccggtaatgg atgcactgtg
     4861 ggccaatcgt ccgcataccc tgatcgacgc ttccggtctg gaagtcggtc tgcctgaccg
     4921 tcagatgggt aactccgaag taggccacgt taacctgggt gccggccgca tcgtgtatca
     4981 ggacctgact cgtctggacg ttgaaatcaa agatcgcgct ttctttgcta atccggtgct
     5041 gactggcgcg gtagataaag cgaaaaacgc aggtaaagca gtacacatta tgggtctgct
     5101 ctccgcaggc ggcgtacaca gccacgaaga tcacatcatg gcgatggtag aactggcagc
     5161 tgaacgcggc gcagaaaaaa tctacctgca cgcattcctt gacggtcgcg acactccgcc
     5221 gcgcagtgct gaatcctcgc tgaaaaaatt tgaagagaaa tttgctgcgc tgggtaaagg
     5281 ccgcgtagcg tccatcattg gtcgttacta cgcgatggac cgcgataacc gttgggatcg
     5341 cgttgaaaaa gcttatgacc tgctgactct ggcgcagggt gagttccagg ccgataccgc
     5401 cgttgctggt ttgcaggctg cttatgctcg cgacgaaaac gacgagttcg tgaaagcgac
     5461 cgttattcgt gcagaaggtc agccagatgc ggcaatggaa gacggcgatg cgctgatttt
     5521 catgaacttc cgtgctgacc gcgcgcgtga aatcactcgt gcattcgtga acgctgattt
     5581 cgatggcttc gcgcgtaaga aagtggttaa cgtcgatttc gtgatgctga ccgaatacgc
     5641 cgctgacatc aaaactgcgg ttgcttaccc acccgcttcc ctggttaaca ccttcggcga
     5701 gtggatggcg aaaaacgaca aaactcagtt gcgtatttcc gaaaccgaaa aatatgccca
     5761 cgtcactttc ttctttaacg gtggcgtaga agagtcgttc aaaggcgaag atcgcattct
     5821 gatcaactca ccgaaagtgg ctacctacga tctgcaaccg gaaatgagct ctgcagagct
     5881 gaccgaaaaa ctggttgcgg caatcaagag cggcaaatac gacaccatta tctgtaacta
     5941 tccgaacggc gacatggtag gtcacaccgg ggtgatggaa gcggcggtta aagcggttga
     6001 agcgctggat cactgcgtgg aagaagtcgc gaaagcggtt gaatccgtgg gtggacaact
     6061 gctgatcacc gctgaccacg gtaacgctga acagatgcgc gatccggcaa cgggtcaggc
     6121 acacacggca cacaccaacc tgccagttcc gctgatttac gttggtgata agaacgtgaa
     6181 agcggttgaa ggcggcaaac tttctgacat cgcgccgacc atgttgtcgc tgatgggtat
     6241 ggaaatcccg caagagatga ctggtaagcc gctgttcatc gtggaataat ccctccccat
     6301 gaggggaaag gcgattaata ccatgacacg ggccgtgaaa ccgcgcaggt ttgcaatcag
     6361 gcccatcatc tacgccagcg ttcttagcgc tggcgtattg ttgtgcgcct tttccgccca
     6421 cgcggatgag cgtgaccaac tcaaatctat tcaggctgac atcgccgcaa aagagcgcgc
     6481 ggtacgccaa aagcaacaac aacgcgcaag cctgctcgca caattgaaaa agcaggaaga
     6541 agcgatctct gaagccactc gcaaactgcg cgaaacgcaa aacacgctca atcaactcaa
     6601 taaacagatt gatgagatga acgcgtcgat tgccaaactg gagcagcaaa aagccgccca
     6661 ggagcgcagc ctcgccacac aactggatgc cgcattccgt cagggcgagc ataccggtat
     6721 tcagctgatc ctcagcggtg aagaaagcca gcgtggacag cgtttacagg cttatttcgg
     6781 ctatctcaac caggcgcgac aagaaaccat tgcccagttg aagcaaacgc gtgaagaagt
     6841 cgccatgcag cgtgctgaac tggaagagaa acaaagcgag caacaaacgc tattatatga
     6901 acagcgcgcc caacaggcga aactgactca ggctctgaac gagcgtaaaa agacgctggc
     6961 ggggctggaa tcttccatcc agcaaggtca gcaacagttg agcgagctgc gcgccaacga
     7021 atcccgtctg cgtaacagca ttgcccgtgc ggaagccgcg gcgaaagcgc gtgcagaacg
     7081 agaagcgcgt gaggcccagg cggttcgcga ccgccagaaa gaagcgacgc gcaaaggcac
     7141 cacctacaaa ccgaccgaaa gcgaaaaatc gctgatgtcc cgaactggtg gcctgggtgc
     7201 gccgcgtggt caggcattct ggccggttcg cgggccgacg ctgcatcgct atggcgagca
     7261 gctacagggt gaattacgct ggaaagggat ggttatcggt gcctctgaat gtactgaagt
     7321 taaagcaatt gccgacggtc gagtgattct ggctgactgg ctgcaaggct acggtctggt
     7381 ggtggtggtt gagcatggta aaggcgacat gagtctttac ggctataatc agagcgcact
     7441 ggtgagcgtt ggttcgcagg ttcgcgcggg ccagccaatt gcactggtgg gcagcagtgg
     7501 cggtcagggt cggccttcac tctatttcga aattcgccgc cagggtcagg cggtcaatcc
     7561 acagccgtgg ttgggaagat aagttttgtt tccatttcgt cgtaacgttc ttgcatttgc
     7621 cgctctgttg gcgctctcct cccccgtact tgctggcaaa cttgccatcg tcattgatga
     7681 ttttgggtat cgcccgcaca acgaaaacca ggtgctggcg atgccttccg ctatctccgt
     7741 cgctgtatta cccgattcac cgcacgccag agagatggcg accaaagcgc ataacagcgg
     7801 tcacgaagtg ttgattcatc tgccgatggc accgttgagt aaacagccgc tggagaaaaa
     7861 tacgctgcgc ccggagatga gcagcgacga aattgagcgc attattcgta gtgcggtcaa
     7921 taacgtgccc tatgccgtgg ggatcaacaa ccacatgggc agcaagatga cctctaacct
     7981 gtttggtatg cagaaagtga tgcaggcgct ggcgcgttac aatctttact tcctcgacag
     8041 cgtaactatc ggtaataccc aggcgatgcg cgccgcacaa ggcactggcg tgaaggtgat
     8101 caaacggaag gtgttcctcg acgattcaca aaacgaagcg gacatccgtg tgcagttcaa
     8161 tcgcgcaatt gatctggcgc gtcgcaacgg ttcaaccatt gccattgggc atcctcaccc
     8221 ttcaacggta cgcgtgctac aacagatggt ttataacctg ccgccagata ttacgctggt
     8281 gaaagccagc agtctgttga atgaaccaca ggtcgatacg tctacaccgc cgaagaacac
     8341 tgtgcccgac acaccgcgta atccgttccg tggcgtgaag ctgtgcaaac cgaagaaacc
     8401 gatagaacct gtttatgcta atcgcttctt tgaagtatta agcgaaagca tcagccagag
     8461 cacgctgatc gtttacttcc agcatcagtg gcaaggctgg ggcaaacagc ccgaagcggc
     8521 gaaacttaac gctagcgcaa attaaaggcg ctacgcgtaa tgcgatggtg cgaccgcgtt
     8581 ttgtcgcgcc attgccataa gcggaaagac cacagtaacg cctggtaacc caccttcacg
     8641 ctgcgcacat tggtaatcag gcgcttatac ataccggaag taaatatctc ggcaatcatc
     8701 cgttggcggg taagaatatc cggctctttg cgcaccgcat ggcaaacacg caatgcttcg
     8761 taagttattt gctgatgaaa ttccggataa atcgtaattt tgtcggcata atttcgattt
     8821 aatttctcca gcaggcgagt aatcttaata tagtgacgtt gataattaag gtttttattc
     8881 ccttgtctat gcaaccgact cactgacgta ttatgcagat aatatttata taatgattgc
     8941 tcggtatatc gcgcacgcag cgcattaaac atgaattctg ttgtccagac aatatcctga
     9001 tgatgtaatc cggcaataaa tttaatgtta tttttaacaa taacatcgcg gcgataaacc
     9061 cccatccaga ccacgtgagt ccaacggcgc gaagaaagcc ccatccgcag ccagtccggg
     9121 ccggttaata caccggttga gcgaaggcga tcgctgggga tggattgcca ggtttctccc
     9181 gtttcacgaa aacaccagtc agcgttgcac tgcgccacgt cgaggtcgtc ctctaacgcc
     9241 atggtcatca gcgtttcgta catggtggga tagacttcat cgtcagcatc gacaaaagcg
     9301 acatatttgc ccgttgccac ttcaatccca cgattacgcg ccaccgatgc gccagcattc
     9361 gcctgatgca acaaacgaac gtgcggatag ttttctgcgt aatgctttgc tatttcaaca
     9421 gaattatccg ttgaaccatc gttaataata atgatttcca gagcagtcca ggtttgcgta
     9481 attaaagatt ccatacaagt gcggaaatca tcgcccgcat tatataacgg aataataaca
     9541 ctaagtttat tggtgctgtt catcataaat taccgacgac ctctgaagtt atcctgacgt
     9601 tttacaggct ttgtattaag aaactattaa gcctgtgaga tattattttt acaggtgaga
     9661 gagtcacttc agggtagaga gataatgaga gcagctatat aagagatcag cacaattacg
     9721 aactctttat tacactgaca ggattttaca tatttaacag attatcctca gataaaaggg
     9781 ctggaattcc agcccttgtt cgtgttaatc ccagctcaga ataactttcc cggactggcc
     9841 cgaacgcata gcgtcaaagc ccttctggaa atcatcgata gagaaacgat gggtaatgat
     9901 cggcgagaga tcgaggccag actgaatcag cgccgccatc ttgtaccagg tttcaaacat
     9961 ctcacgaccg taaatacctt taatgaacaa gcctttaaag atcactttgg tccagtcgat
    10021 agacatatca gacggtggaa tacccagcat cgcaatgcga ccgccgtggt tcatggtgtc
    10081 gagcatggta cgaaacgctg gcggcgcacc ggacatttcc agaccgacat caaagccttc
    10141 ggtcatgcct aactccgcca tcacgtcatt gagattttct ttggcgacgt taaccgcacg
    10201 ggtgatgccc attttgcgcg ccagctcaag gcggtattcg ttaacatcag tgatcaccac
    10261 attgcgtgca ccaacgtgtt tcgccaccgc cgcagccata atacctatcg gacctgcacc
    10321 agagaccagc acatcctcgc caaccagatc gaacgacagc gcggtatgca cggcgttacc
    10381 gaagggatca aaaatggaag ccaggtcgtc ggagatattg tctgggattt tgaaggcgtt
    10441 gaacgccggg atcaccagat attcggcgaa gcagcccgga cggttaacgc cgacgccgat
    10501 cgtgttgcgg cacagatggg tacgaccgcc acgacagttg cgacagtgac cgcaagtgat
    10561 atggccttcg ccagaaacgc gatcgccaat cttgaagcct ttcacttcct gaccaatacc
    10621 taccacttca ccgacatatt catggcccac gaccatcggc accgggatgg ttttttgcga
    10681 ccactcatcc cagttataga tgtgaacgtc agtcccgcag atggctgttt tacggatttt
    10741 aatcagcaga tcgttatgcc cgagttccgg tacaggaacg tcggtcatcc agatgccctc
    10801 ttccgctttc agtttggata acgctttcat ctcacatcct caggcgataa cgcccagttg
    10861 tttaccaata cgcgtgaatg cttctactgc acgcgtaatt tgctcagggg tatgcgccgc
    10921 agacatctgg gtacgaatac gcgcctgacc tttcggaacg accggataga agaaaccggt
    10981 gacgtaaatg ccctcttttt gcagctcacg ggcaaatttc tgcgccacta ctgcatcgcc
    11041 aagcatgacc ggaataatgg catgatcggc tcccgccagg gtaaagcccg ccgccgacat
    11101 ttgctcacgg aactgacgcg cgttcgccca cagacggtca cgcagttcgc tgcccgcttc
    11161 gaccatctcc agtactttga tggacgcggc aacaatggcc ggtgccagcg agttggagaa
    11221 caggtacgga cgagaacgct ggcgcagcca ctcaaccacc tctttgcgcg ccgcggtata
    11281 accaccagaa gccccgccca gcgctttacc aagcgtaccg gtgataatat cgacccggcc
    11341 catcacatcg cagtattcat gggaaccacg accattttca ccgacaaaac cgaccgcgtg
    11401 ggagtcatcc accatcacca gggcatcgta tttatctgcc agatcgcaaa cgcctttcag
    11461 gttggcaatc acgccgtcca ttgagaacac accatcggtg gcaatcagca catgacgcgc
    11521 accggcttca cgcgcttctt tcagacgtgc ttccagctcc tgcatatcgt tgttggcata
    11581 gcgatagcgt ttagctttgc acagacgcac accatcaata atagacgcgt ggttcagtgc
    11641 gtcggagata atggcgtctt ccgcacccag cagcgtttca aacagtccac cgttagcatc
    11701 aaagcaggaa gagtagagaa tcgcatcttc catccccagg aatgccgcca gtttttgttc
    11761 aagctcttta tggctgtcct gagtgccgca aataaaacgc accgaagcca tgccgaaacc
    11821 gtgagaatcc attcccgcct ttgctgccgc aatcagatcc ggatgattcg ccagcccgag
    11881 atagttgttg gcacaaaagt taatgacgtg gcttccatca gccacagtga tatctgcttg
    11941 ctgcgcagac gtaataatgc gctcttcttt aaacaaccct tccgcccgtg cggtttccag
    12001 atcgttggtt aactgctgat aaaattctcc acgcattgcg attctccaga cagggcaaat
    12061 tccagcacat attacccaaa cttatacgtc gcgacgagat gacgcgttaa cacttctgca
    12121 aaattcagga taaataacgt gtaacttgat gtctctctaa cacctacaga tagtagaaaa
    12181 actgtacagt ttgggctggg cataatgatg attgatttta ctgcattgat ataaaaagaa
    12241 aaaatgatgc caaagcatca tttttcctat ctcagttggt atcaaaacgc tacccactaa
    12301 tggagggaaa cctattttct tgaaaggaaa attctcagcg cctgcatttt tgcccctaaa
    12361 gtgttactcc tgaagcagcg aaacaaatcg aaccattttc ctctccccag atagtttagg
    12421 ttgaagagat cggaacgttt gtaatagcac atgacaaaaa tgccctggtc atcgtccaca
    12481 atgttattgt ttagtgttat tttttgactt tccagaacta atttatagaa ttctttccat
    12541 ttatgctgtg aaccaacaat tgcgccccca ataatatata catgattgcc aatcatgaaa
    12601 tcaaaagcct gttgttgaga tgtaacagta agcccttttt ttatagtgaa aagatgcatc
    12661 ttattttcat caaatgggaa atcccaaatt ttcaatcctc gagttacatt tggcttacgg
    12721 caatagccaa aatctatcca cgcaacaaga ggcgttttca ctaaacccat gttgatagct
    12781 ttatttacaa aataggcctt aaggttacat accaaaacat actctggtga ccagtactct
    12841 gggtttttta attgtcgagg ctcaagtcta tttgtaaacg actcatcttt ttgaattttt
    12901 tcgatacgac ttctgatata tctaaatttc ttttttatat cgataacgat aaccgttgtt
    12961 ggttttccgt tgcgaatcgt ttcaatcctt ggtttcaaat cgggagaagt gaaaataatc
    13021 atctcatttt caagtgcggc cagacgctca aagtaactaa aataaacatc aactgaacga
    13081 gctagttttt cacggaaccc tttattagca gtccaatccc ctctaccaat gtcaaaatat
    13141 gcagtgataa ttgtggtgga tgatttcatt actaataatg accattaata taaaaaagaa
    13201 ttatatcata aatattaaca gaatgtatac tgtatattat ccattcaaat gcttccgtta
    13261 tttatcatac atcggaatat t
//
LOCUS       DAJVTL010000117        13203 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.119, whole genome shotgun sequence.
ACCESSION   DAJVTL010000117 DAJVTL010000000
VERSION     DAJVTL010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13203
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.119"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(86..4309)
                     /gene="rpoC"
                     /locus_tag="OQQ26_003320"
     CDS             complement(86..4309)
                     /gene="rpoC"
                     /locus_tag="OQQ26_003320"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HCS1858671.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQIL
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAK
                     TSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQI
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEA
                     PAAPQVTAEDASASLAELLNAGLGGSDNE"
     gene            complement(4386..8414)
                     /gene="rpoB"
                     /locus_tag="OQQ26_003321"
     CDS             complement(4386..8414)
                     /gene="rpoB"
                     /locus_tag="OQQ26_003321"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004870488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HCS1858672.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     EEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            complement(8734..9099)
                     /gene="rplL"
                     /locus_tag="OQQ26_003322"
     CDS             complement(8734..9099)
                     /gene="rplL"
                     /locus_tag="OQQ26_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HCS1858673.1"
                     /translation="MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKSLEEAGAEVEVK"
     gene            complement(9166..9663)
                     /gene="rplJ"
                     /locus_tag="OQQ26_003323"
     CDS             complement(9166..9663)
                     /gene="rplJ"
                     /locus_tag="OQQ26_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HCS1858674.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            complement(10076..10780)
                     /gene="rplA"
                     /locus_tag="OQQ26_003324"
     CDS             complement(10076..10780)
                     /gene="rplA"
                     /locus_tag="OQQ26_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HCS1858675.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASVN"
     gene            complement(10784..11212)
                     /gene="rplK"
                     /locus_tag="OQQ26_003325"
     CDS             complement(10784..11212)
                     /gene="rplK"
                     /locus_tag="OQQ26_003325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HCS1858676.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            complement(11371..11916)
                     /gene="nusG"
                     /locus_tag="OQQ26_003326"
     CDS             complement(11371..11916)
                     /gene="nusG"
                     /locus_tag="OQQ26_003326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HCS1858677.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMV
                     PTEEVVEIRSGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            complement(11918..12301)
                     /gene="secE"
                     /locus_tag="OQQ26_003327"
     CDS             complement(11918..12301)
                     /gene="secE"
                     /locus_tag="OQQ26_003327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HCS1858678.1"
                     /translation="MSANTEAQGSGHGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
     gene            complement(12531..>13203)
                     /gene="tuf"
                     /locus_tag="OQQ26_003328"
     CDS             complement(12531..>13203)
                     /gene="tuf"
                     /locus_tag="OQQ26_003328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312930.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCS1858679.1"
                     /translation="RGSALKALEGDVEWEAKILELAGFLDSYIPEPERAIDKPFLLPI
                     EDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGE
                     NVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQF
                     YFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVV
                     AKVLS"
BASE COUNT         3047 a         3616 c         3265 g         3275 t
ORIGIN      
        1 atattctgac aaatgctctt tccctaaact acccccataa aaaaacccgc cgaagcgggt
       61 ttttatgtta tttgcggatt aacgattact cgttatcaga accgcccaga cctgcgttca
      121 gcagttctgc caggctggca gatgcgtctt ctgcagtcac ctgcggtgca gccggagctt
      181 cacccgcagc acggcgacgc atacgatcct ggtggtacgc ataaccggta cctgctggga
      241 tcagacgacc cacgataacg ttctctttca ggccgcgcag ttcgtcgcgt ttgcccgcaa
      301 cggctgcttc ggtcagcacg cgagtggtct cctggaacga tgccgcggag atgaaggact
      361 cggttgccag agacgccttg gtgataccca gcagatcgcg ggagtaagtt gcacccactt
      421 tgccgttcgc ttccagttcg cggtttgcga tcttgacgcg agagtattca acctgttcgc
      481 cttccaggaa gtcggagctg cccgcgttaa cgatggtagc tttacgcagc atctgacgaa
      541 cgataacttc gatgtgttta tcgttaatct taacgccctg cagacggtat acgtcctgta
      601 cttcgttaac gatgtaacga gtaacagcat gaacaccacg cagacgcaga atgtcgtgcg
      661 gcgcttccgg accgtcggaa attacgtcac cacgttctac acgttcacct tcgaacacgt
      721 tgagctgacg ccatttcgga atcatctctt cgtacggatc gctaccgtct accggggtga
      781 taaccagccg acgtttacct ttggtttctt taccgaagga aacgataccg ctgatttcag
      841 ccaggattgc cggctctttc ggacgacgtg cttcgaacag gtccgcaacg cgcggcagac
      901 caccggtgat gtccttggta ccgccggatt cctgcggaat acgcgccagg gtgtcaccag
      961 agctgatctg tacgccatct tccagctgaa caatcgcttt acccggcagg aagtactgcg
     1021 caggcatatc ggtacctggg atcagaacgt cgttaccctg agcatcaacg attttcagtg
     1081 ccggacgcaa atctttacca cctgcggtac gttctgcgga atccagaacc accagcgaag
     1141 acagacctgt cagttcgtcg gtctgacgcg taatggtctg gccgtcgatc atgtcagtaa
     1201 agcgtacaaa accgcttact tcggtgataa ccggcatggt gtgcgggtcc cagtttgcaa
     1261 cggtttcgcc gccagcaacc tgttcgccat cgcctttcgc cagtaccgca ccgtaaggca
     1321 ctttgtagct ttctttggta cgaccgaatt cgtcgatcag tttcagttcg gtgttacggg
     1381 aagtgataac cagtttaccg ctggagttca caaccgactt cacgttgctg agcttgatgc
     1441 tacctttgtt tttcacctgg atgctggatt cagcagccgc acgagatgcc gcaccaccga
     1501 tgtggaacgt acgcattgtc agctgtgtac ccggttcacc gatggactgt gccgcgataa
     1561 caccgattgc ttcacctttg ttgatgatgt ggccacgcgc caggtcacga ccgtagcagt
     1621 gcgcacatac accaaagtcg gtgtcacaag atacaacaga acgtacttta accgcgtcga
     1681 cagagttctc ttccagcagg tcacaccact gttcgtgcag cagcgtgttg cgcggaacga
     1741 ggatatcagc agtacccggc ttcagaacgt cttcagcagt tacacgaccc agtacgcgat
     1801 cgcgcagcgg ctctttaacg tcaccaccct cgataaccgg agtcatcatg ataccttcat
     1861 gggtaccaca atcgtcttcg gtaaccacca ggtcctgcgc cacgtcaacc agacgacgag
     1921 tcaggtaacc ggagttcgca gttttcagtg cggtatccgc cagaccttta cgagcaccgt
     1981 gggtggagat gaagtactgg agtacgttca gaccttcacg gaagttcgcg gtgattggcg
     2041 tttcgatgat ggagccatcc ggcttcgcca tcagaccacg cataccagca agctgacgaa
     2101 tctgtgccgc agaaccacgc gcaccggagt cggccatcat gtagatgctg ttgaaggaaa
     2161 cctgcttctc ttcctggccg tcacggttaa taacggtttc agtttgcagg ttatccatca
     2221 tcgctttgga tacacgatcg ttcgccgcag cccagatatc gataactttg ttataacgtt
     2281 cgcccgcagt taccagacca gactggaact gctcctgaat ttcagcaact tctgcttctg
     2341 cctcggagat gatttcgtgt ttcttctccg ggatgaccat gtcatcgata ccaacagatg
     2401 caccagaacg cgctgcatat gcaaagccgg tgtacatgat ctggtccgca aaaataacgg
     2461 tcggtttcag accgagaatg cggtagcagg tgttcagcat tttggagatt gcttttttac
     2521 ccagcgcctg gttgacgatg gagtaaggca gacctttcgg tacaatcatc cacagaatag
     2581 cacggccaac agtcgtgtct ttcaggctgg ttttcgctac taattcaccg ttagcatctt
     2641 tttcatactc ggtgatacgc actttaacgc gcgcatgcag agaagccaga ccagagcgat
     2701 acagacgttc tgcttctttc gggccagtca gcaccatgcc ttcgcctttg gcgttaacac
     2761 agtcacgggt catgtagtac agacccagta caacgtcctg agacggaacg atgattggtt
     2821 cgccgttcgc cggggacagg atgttgttgg tagacatcat cagcgcacgc gcttccagct
     2881 gggcttccag cgtcagcggt acgtgaacag ccatctggtc accatcgaag tcggcgttat
     2941 atgccgcaca aaccagcggg tgcaactgga tagctttacc ttcgatcagt accggttcaa
     3001 atgcctggat acccagacgg tgcagagtcg gtgcacggtt cagcagtacc gggtgttcgc
     3061 ggataacttc gtccaagata tcccaaacga cagcttcttc gcgctcaacc attttcttcg
     3121 cagctttaat ggtggtagca agaccacgca gttccagctt gccgtagatg aacggtttga
     3181 acagctccag cgccattttc ttcggcagac cgcactgatg cagacgcagg tatggaccta
     3241 cggtgattac agaacgaccg gagtagtcaa cacgcttacc gagcaggttc tgacggaaac
     3301 gaccctgttt acctttgatc atgtcggcca aagatttcag aggacgcttg ttagaaccgg
     3361 tgatcgcacg accgcgacga ccgttatcca gcagggcgtc taccgcttcc tgcagcatac
     3421 gtttttcgtt acgtacgatg atgtccggcg cagccagatc cagcagacgt ttcagacggt
     3481 tgttacggtt aatgacgcga cgatacagat cgttcaggtc agaagtcgcg aaacgaccac
     3541 catccagcgg aaccagcgga cgcagatctg gcggcagtac cggcagaaca gtcaggatca
     3601 tccactctgg tttgttacca gactgaacga acgcttccag cagtttgata cgcttggtca
     3661 gctttttacg cttggtttcg gagttggttt cgttcagctc ttcacgcagc tgttcgcact
     3721 cttgctccag atccatgctc ttcagcaggg cctggattgc ttccgcaccc attttcgcgt
     3781 cgaattcgtc accgaactct tccagcgcgt ccagatactg ctcttcagtc aggatctgct
     3841 gacgttccag gttggtcata ccgccttcga taaccacata ggattcgaag tacagtacgc
     3901 gttcaatatc gcgcagcggc atatcgagca gcaggccgat acgggacggc agcgatttca
     3961 ggaaccagat gtgcgcagtc ggggaagcca gttcgatgtg gcccatacgc tcacggcgta
     4021 ctttagtctg ggtcacttca acgccgcact tctcacagat gacgccacgg tgtttcaggc
     4081 gcttgtactt accgcacagg cactcgtaat cttttaccgg cccaaagata cgggcgcaga
     4141 aaaggccgtc acgttctggt ttgaacgtac ggtagttgat ggtttccggc tttttaactt
     4201 caccgaaaga ccatgaacgg atcatgtctg gcgaagccag agcaattttg atcgcatcaa
     4261 actcttcggt tttagtctgc gctttcagaa actttaataa atctttcacg gatttgctcc
     4321 cgtcggagtt agcacaatcc gctgccgggt tttaccccga cagcagtgac ctgtttgagc
     4381 gagaattact cgtcttccag ttcgatgttg atacccagcg aacgaatctc tttcaacaat
     4441 acgttgaagg attctggcat gcccggctcc atctgatggt tgccgtccac gatgttttta
     4501 tacatcttag tacgaccgtt cacgtcatca gacttaacgg tgagcatttc ctgcagggtg
     4561 tatgctgcgc cgtatgcttc cagcgcccac acttccatct ccccgaaacg ctgaccaccg
     4621 aactgtgcct taccacccag cggctgctga gtaaccaggc tgtaagaacc ggtggaacgc
     4681 gcgtgcatct tgtcgtcgac caggtggttc agtttcagca tgtacatgta accaacggtt
     4741 accggacgct cgaactgttc accagtgcga ccatcgtaca ggcggatctg accggaagtc
     4801 ggcaggtcgc caagtttcag cagctcttta atttctgctt ctttcgcacc gtcgaacacc
     4861 ggcgttgcga ttggcatacc tttgcgcagg ttttcagcca gacgcataac ttcttcatcg
     4921 ctgaaggtac tcaggtcaac tttctgacga acgtcagcgc ccagatcgta cgcacgctgg
     4981 atgaattcgc gcagtttcgc gacttcttgc tgctgtttca gcatggcgtt gatcttgtcg
     5041 ccgatacctt tcgcagccat acccaggtgg gtttcgagga tctgaccgat gttcatacga
     5101 gacggtacgc ccagcgggtt cagtacgatg tctaccggcg taccgttttc atcgtaaggc
     5161 atatcttcga tcgggttgat cttagaaatt acacccttgt taccgtgacg acctgccatc
     5221 ttgtcaccag gctggatacg gcgtttaacc gccagatata ccttaacaat cttcagcacg
     5281 cccggtgcca gatcgtcgcc ctgggtgatt ttgcggcgtt tcgcttcgag tttcttctcg
     5341 aactcgtgtt tcagttcgtc atactgctca gccagctgtt ccagctgatt ttgtttctct
     5401 tcgtcggtca ggcccagctc cagccagcga tcgcgcggca gtttgtcgag cttctcagct
     5461 tcaacgccac cggctaccag cacagcacgg atacggctga acagacccgc ttcgaggatc
     5521 tgcagttctt cagacaggtc tttcttcgcc tgtttgagct gcatttcttc gatttccagc
     5581 gcacgtttgt ctttttctac gccatcgcga gtaaagacct gaacgtcgat aaccgtaccg
     5641 gatacaccgt ttggtacgcg caaagaagag tctttaacgt cagaggcttt ctcaccgaag
     5701 atcgcacgca gcagtttttc ttctggggtc agctgagttt cacctttcgg cgttacctta
     5761 ccaaccagaa tgtcgccacc ggtcacttcc gcaccaatgt aaacgatacc ggattcatcc
     5821 agtttggaga gcgcagcttc acccacgttc gggatgtcag cggtgatctc ttccggcccc
     5881 agcttggtgt cacgggacac acacgccagt tcctgaatgt ggatggtggt gaaacggtct
     5941 tcctgaacaa cacgctcgga tacgaggatg gagtcttcga agttgtaacc attccacggc
     6001 atgaacgcta cgcgcatgtt ctgaccaagc gccagttcac cgagatcggt ggacggaccg
     6061 tctgccagca cgtcgccacg ttcaaccggt tcacccagag acacacacgg catctggttg
     6121 atacaggtgt tctggttaga acgggtgtat ttggtcaggt tgtagatgtc gatacctgct
     6181 tcacccggat acatctcgtc ttcgttaact ttgataacga tacgggaagc atccacgtac
     6241 tgaacgacac caccacgttt agctaccgca gttacaccgg agtcaacggc aacagcacgt
     6301 tccataccag taccaaccag cggcttatca gcgcgcagag tcggaacggc ctgacgttgc
     6361 atgttcgcac ccatcaatgc acggttggcg tcatcgtgtt ccaggaacgg gatcagggac
     6421 gcaccgacgg ataccacctg ctgggtggat acgtccatgt agtcaacctg gtcgcggctg
     6481 aacaagctgg attcgccttt gctacggcag gttaccaggt cttctacgaa gtggccttct
     6541 tcatccaggt tggagttcgc ctgggcgata acgtagttgc cttcttcgat agcagacagg
     6601 tagtgaattt cgtcagttac aacaccgtcg gtcactttac gatacggagt ctcaaggaag
     6661 ccgtattcgt tagtctgtgc gtacacggac agggagttga tcagaccgat gttcggacct
     6721 tcaggggttt cgattggaca tacgcgaccg tagtgagtcg ggtgtacgtc tcgaacttcg
     6781 aagcctgcac gttcacgggt cagaccgcct gggccgagtg cggagatacg acgtttgtgc
     6841 gtaatctcgg acagcgggtt gttctggtcc ataaactgag acagctggct ggaaccgaag
     6901 aactctttca ctgctgcgga aatcggcttg gcgttgatca tatcctgagg catcagggta
     6961 tccagatcgc ccagagacag acgctctttc accgcacgtt ctacacgtac caggccaacg
     7021 cggaactggt tttccgccat ttcgccaacg gaacggatac gacggttgcc gagatggtcg
     7081 atatcatcga cttcaccttt accgttacgg atatcgatga gctttttcat aacatcaatg
     7141 atgtcgtctt tgctcaggat accggaacct tcgatttctt cgcgcagcag agaacggttg
     7201 aacttcatac gaccaaccgc agacaggtca taacggtctt cggagaagaa cagattctcg
     7261 aacaggcttt cagctgcttc acgagtcggc ggctcgccag ggcgcatcat gcggtagatt
     7321 tctaccagtg cgctcagacg gtcgttagtt gggtcgacac gtaaggtttc agagatatac
     7381 gggccgtgat ccagatcgtt ggtgaacagc gtttcgatac gcttgtgacc agactggctc
     7441 agcttagcca gcagatccag gctcagctcc atgttcgctg cgcagatcag ctcgccggta
     7501 gactcatcaa tatagtcttt agcaaccact ttacctgcga tgtactcaac cgggacttcg
     7561 atcagtttga cgtcgtcttt ttccagctgg cgaatgtggc gcgcagtgat acggcggcct
     7621 ttttctacgt acactttacc gttagcttcg atgtcaaaag atgcggtttc accacgcagg
     7681 cgttccggca ccagttccat ctgcagcttg ttatcacgga tttcaaagat aactttttca
     7741 aagaacaggt cgaggatctg ctctgtggtg tagttcaggg cgcgcagaat gatggtcgca
     7801 ggcagtttac ggcgacggtc gatacgtacg aacaggttgt ccttcggatc gaattcgaag
     7861 tccagccagg aaccacggta agggatgatg cgcgcgttat acagcacttt acccgaagag
     7921 tgggttttac ctttgtcgga gtcaaagaag acgcccggac tacggtgcag ctgggaaacg
     7981 ataacacgct cagtaccgtt gataacaaag gtaccgttgt ctgtcatgag cggaatttcg
     8041 cccatgtaga cttcttgttc tttaatgtct tttacggtgc cttccggcgc ttcgcgctca
     8101 tagatcacca gacgcagttt aacgcgcagc ggtgcggaat aggtcacgcc acggatttga
     8161 cattcctgga cgtcaaacac cggttcgcca aggcggtagc tgacgtattg cagctcggaa
     8221 ttaccgctgt agctctgaat cgggaatacg gaacggaaag cagcttccag accatactgt
     8281 ccttcaggat cttgctcgat aaatttctga aacgagtcaa gctggataga aaggagataa
     8341 ggtacatcca gaacttgtgg acgtttacca aaatccttac gaatacgttt tttctcggta
     8401 taggagtaaa ccatagggtt cctcagctcg ctgacaagtc gacccatctg tccattgagc
     8461 ggacagtttg tgcaacacta ttttgttgac cggaaaatgg aacactttcc gcaatgcctg
     8521 ttgctatcac gcttaaacca tttcattgcg atttacacag aacgggcgtc ctgtcgcagt
     8581 atattaagtc gtcgatagaa acaagcattg aaaggcacag cagtagtcaa acagtgtgaa
     8641 acgctactgg cgccttacag cgcaaaaagg ctggtgacca aaaagtcacc agccatcagc
     8701 ctgatttctc aggctgcaac cggaagggtt ggcttattta acttcaactt cagcgccagc
     8761 ttcttccagg gattttttca gtgcttctgc gtcgtctttg ctcacgcctt ctttcagagc
     8821 agccggtgca gattctacca ggtctttagc ttctttcaga cccaggccag ttgcgccacg
     8881 tactgctttg ataacagcaa ctttgttagc gccagcagct ttcagaatta cgtcgaattc
     8941 agttttttct tcagcagctt caaccgggcc agcagctaca gctacagcag cagcagcgga
     9001 aacaccgaat ttttcttcca ttgcagagat cagttctaca acgtccatta cagacatagc
     9061 tgcaactgct tcaatgattt gatctttagt gatagacatt taaattgttc ctgaatatca
     9121 gaataagttt atacgtaagc gaatgcgtta aaaagataac tgcgattaag cagcttcttt
     9181 cgcatcgcgt acagcagcca gagtacgaac cagtttgcca gccgaagctt ctttcatggt
     9241 tgccatcagg cgtgcaattg cttcttcgta ggtcggcaga gttgccaggc ggtcgatctg
     9301 agacgccggg atcagctcac cttcaaaggc agcggctttg acctcaaatt ttgcattcgc
     9361 tttcgcgaac tctttgaaca gacgagcagc agcgcccggg tgttccatag agtatgcaat
     9421 cagggtcgga ccaacaaacg cgtctttcag gcactcgaac ggagtacctt caacagcacg
     9481 gcgcagcagg gtgttacgaa caacacgcat gtatacgcca gcttcgcgac ctgctttacg
     9541 cagttcagtc attttatcta cagttacgcc acgggaatcc gcaactactg cagacagcgc
     9601 gcctttggct acttcgctga cttcagcaac aatcgcttgt ttgtcttgaa gatttaaagc
     9661 cattagcttt gctcctggat gtttgccaga gaaaatctct ggaactcact tcactcctcc
     9721 aaacggagag agcgtcttaa ttacggtgag cagaaacaag ccagaatata aaagaataat
     9781 cttagcgttc tgtcaccgtc tacgcagggg attaagtttc ttgcgaaact cctgcggtct
     9841 tcgacggagg cctggatagg ccaggctcca acgaacaaat cttttctatc cgtcgctatt
     9901 cagcttgtgg cggcgttggc ttccttcgtt cgcaccagtc acatagttag ctatgctcct
     9961 ggcgactcac tcagttgccg ccttgccaca acccgaatat ctcggatata cgtctgcatt
    10021 aagcattata cgtgggggta agattgtaga caaaatcacc gcccacgtaa aggcattagt
    10081 ttacagaagc gctcaggcca gcctggtcaa ctgcaacacc tgcacccatg gtggtggaga
    10141 tgctaacttt cttgatgtac acgcctttcg cctgagtcgg ttttgctttt ttcagcgcaa
    10201 ccagcagagc ttccaggttt tctttcagtt tgtcagcgtc aaagtccact ttaccgatgg
    10261 tggtgtggat gatgccgttt ttgtcgttac ggtaacgaac ctggccagct ttagcgtttt
    10321 taaccgcttc agcaacgttc ggcgttacag tacccacttt cgggtttggc atcaggccgc
    10381 gcggacccag aacctggccc agctggccaa caacgcgcat tgcatccgga gaagcaataa
    10441 caacgtcaaa gttcatttcg cctttcttga tctggtcagc cagatcttcc atacctacca
    10501 gttcagcacc tgcagcttta gcagcttcag cgtttgcacc ttgggtaaat acggctacgc
    10561 gaacggaacg gccagtaccg tgcggcagta cagttgcacc acgtacgttc tggtcagatt
    10621 tacgagcgtc gatgccgagg ttaacagcta cgtccacgct ttctacgaat ttagcagtcg
    10681 ccagctcttt cagcagtgcg atagcttcgt tgatgtcgta ctgtttggtt gcatcaactt
    10741 tctcgcggat aacacgcatg cgcttggtca gtttagccat ttcttagtcc tccactacca
    10801 ggcccatgga acgtgcagta ccttcgatgg agcgagtcat cgcttcaatg tcggcaccag
    10861 tcatgtcggc agctttggtc tgcgcgattt cctgcagctg agcgcgggaa attttaccca
    10921 ctttgtcttt gttcggctta ccggaaccag acttgatacc agccgctttt ttcagcagaa
    10981 ctgctgccgg cggagtcttg gtaacgaaag tgaaagaacg gtcagcgtaa acggtgatta
    11041 ctaccggaat cggcagacct ttttcgatgg aatcagtttt tgcgttgaac gctttgcaga
    11101 attccatgat gtttacgccc tgctgaccca gagccggacc tactggcgga ctcgggttag
    11161 ccataccagc tgcaacctgc agcttgacat aggcttgtac tttcttagcc attataaatt
    11221 cctcaagttg ggtaataacg cctctgagag gctccccgtg atataaaaaa tcgttttacg
    11281 ggcaaggccc ataaaaacaa aaggcgcgaa attgtattcc aatctcgcgc cttgtgcaac
    11341 gattaaatcg ccgctttttt gatcgctggg ttaggctttt tcaacctggc tgaagtccag
    11401 ctctaccggg gtcgcacgac cgaagataga aacagacact ttcagacgag atttctcgta
    11461 atccacttct tcaacaacac cgttgaagtc agcgaacgga ccatcattaa cacggaccat
    11521 ttcacccggt tcaaacagcg ttttcggacg cggcttatca ccaacctgct gcaggcggtt
    11581 cataatcgca tcgacttctt tatcgctgat tggcgcagga cgatcggaag taccgccgat
    11641 gaagcccatc acacgcggta cgctgcgcac caggtgccag ctcgcgtcgt tcatcaccat
    11701 ctgaacgagg acgtagccag ggaagaattt acgttcgctt ttgcgacgct gaccgctacg
    11761 gatttcaacc acttcttcgg ttggtaccat gacttcacca aacaaatctt ccatgttgtg
    11821 taatttaata tgctcacgta gcgacgttgc tacgcggcct tcaaaaccgg aaaacgcctg
    11881 aacgacgtac cagcgctttt taggagcttc agacatctca gaacctcagg ccagtgataa
    11941 aggataccag gcgaaccaga ataccatcca gtccccacag gatcagtgac attactgcgg
    12001 taaccgcagc cacaatcagc gtggtgtgca atgtttcctg gcgagtcggc caaatgacct
    12061 tacggacttc ggtacgcgct tcacgggcaa aagcaacggt agctttacct tttgtcgtta
    12121 acagcgcgac accacccgct gcagcaatca gaattactac ggccagcgca cgcagcggca
    12181 gcataatgtc gcgataaagg tagttgccga caatcgccac caggagcaat gccaccacaa
    12241 cgacccactt catcgcttcc aggccgtgcc cgcttccttg agcttcggta ttcgcactca
    12301 taaaccaacc tgtcagaagt tttctacaaa cattttcacc ccgcgatcgc gaggcaaacc
    12361 aaatcgaaac gcgtattagc ttttcggatt atacgccctc aacagagcct gtctcagcaa
    12421 tgattatgac aaagaaaatc actgatgagc caggttctgg tacgaaagcg tgcaaaaagg
    12481 gcatcaaatg atgccctttt agtgcgcatt gcgtcaaatg ttatcggcaa ttagctcaga
    12541 acttttgcta caacgcccgc gccaacggta cggccgcctt cacggattgc gaaacgcaga
    12601 ccgtcgtcca tcgcgatcgg gtggatcagg gtaacaacca ttttgatgtt gtcgcccggc
    12661 attaccatct ctacgccttc cggcagttcg atggtaccag tcacgtcagt agtacggaag
    12721 tagaactgcg gacggtagcc tttgaagaac ggagtatgac ggccgccttc atctttggac
    12781 agaatgtaca cttcagattc gaacttggtg tgcggcttga tggtgcccgg cttagccagt
    12841 acctgaccac gttcgatttc ttcacgtttg ataccacgca gcagaacacc tacgttctca
    12901 ccagcacggc cttcgtccag cagtttgcgg aacatttcaa cgccagtaca ggtagacttc
    12961 tgagtctctt tgataccaac gatttcaact tcttcaccaa ctttgatgat accgcgttct
    13021 acacgaccgg taacaacggt accacgaccg gagatggaga atacgtcttc gatcggcagc
    13081 aggaacggct tgtcaatcgc acgctctggt tccggaatgt aagaatccag gaagccagcc
    13141 agttccagga ttttcgcttc ccactctacg tcgccttcca gcgctttcag agcagaacca
    13201 cga
//
LOCUS       DAJVTL010000118        13032 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.120, whole genome shotgun sequence.
ACCESSION   DAJVTL010000118 DAJVTL010000000
VERSION     DAJVTL010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13032
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.120"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(121..540)
                     /gene="atpC"
                     /locus_tag="OQQ26_003329"
     CDS             complement(121..540)
                     /gene="atpC"
                     /locus_tag="OQQ26_003329"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HCS1858680.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(561..1943)
                     /gene="atpD"
                     /locus_tag="OQQ26_003330"
     CDS             complement(561..1943)
                     /gene="atpD"
                     /locus_tag="OQQ26_003330"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HCS1858681.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(1970..2833)
                     /gene="atpG"
                     /locus_tag="OQQ26_003331"
     CDS             complement(1970..2833)
                     /gene="atpG"
                     /locus_tag="OQQ26_003331"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HCS1858682.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(2884..4425)
                     /gene="atpA"
                     /locus_tag="OQQ26_003332"
     CDS             complement(2884..4425)
                     /gene="atpA"
                     /locus_tag="OQQ26_003332"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HCS1858683.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(4438..4971)
                     /gene="atpH"
                     /locus_tag="OQQ26_003333"
     CDS             complement(4438..4971)
                     /gene="atpH"
                     /locus_tag="OQQ26_003333"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HCS1858684.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(4986..5456)
                     /gene="atpF"
                     /locus_tag="OQQ26_003334"
     CDS             complement(4986..5456)
                     /gene="atpF"
                     /locus_tag="OQQ26_003334"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HCS1858685.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(5518..5757)
                     /gene="atpE"
                     /locus_tag="OQQ26_003335"
     CDS             complement(5518..5757)
                     /gene="atpE"
                     /locus_tag="OQQ26_003335"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HCS1858686.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(5804..6619)
                     /gene="atpB"
                     /locus_tag="OQQ26_003336"
     CDS             complement(5804..6619)
                     /gene="atpB"
                     /locus_tag="OQQ26_003336"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HCS1858687.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(6628..7008)
                     /gene="atpI"
                     /locus_tag="OQQ26_003337"
     CDS             complement(6628..7008)
                     /gene="atpI"
                     /locus_tag="OQQ26_003337"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HCS1858688.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(7625..8248)
                     /gene="rsmG"
                     /locus_tag="OQQ26_003338"
     CDS             complement(7625..8248)
                     /gene="rsmG"
                     /locus_tag="OQQ26_003338"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HCS1858689.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIGPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGVRHLVVIKANKI"
     gene            complement(8312..10201)
                     /gene="mnmG"
                     /locus_tag="OQQ26_003339"
     CDS             complement(8312..10201)
                     /gene="mnmG"
                     /locus_tag="OQQ26_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HCS1858690.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPDLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFRVLAQQ
                     HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVICSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(10580..11023)
                     /gene="mioC"
                     /locus_tag="OQQ26_003340"
     CDS             complement(10580..11023)
                     /gene="mioC"
                     /locus_tag="OQQ26_003340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HCS1858691.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(11113..11571)
                     /gene="asnC"
                     /locus_tag="OQQ26_003341"
     CDS             complement(11113..11571)
                     /gene="asnC"
                     /locus_tag="OQQ26_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HCS1858692.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIKP"
     gene            11722..12714
                     /gene="asnA"
                     /locus_tag="OQQ26_003342"
     CDS             11722..12714
                     /gene="asnA"
                     /locus_tag="OQQ26_003342"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HCS1858693.1"
                     /translation="MKTAYIAKQRQISFVKSHFSCQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLHL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(12719..>13032)
                     /locus_tag="OQQ26_003343"
     CDS             complement(12719..>13032)
                     /locus_tag="OQQ26_003343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858694.1"
                     /translation="AIRFLSQQFRGGTDLASCFRAIMERLQSREWFDADAVVISDFIA
                     QRLPDDVTSKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWR
                     R"
BASE COUNT         3131 a         3425 c         3288 g         3188 t
ORIGIN      
        1 cggacagggg tatcgcttag tttttcaatt tcctatacgt gaacgctctt caggacgggt
       61 caacgcgtaa aaaaaagcca gcctgtttcc agactggctt ttgtgctttt caagccggtg
      121 ttacatcgct tttttggtca actcgataac gcgcagctgc gcgatcgctt tggccagttc
      181 cgcagacgcc tgagcgtaat ctacgtcgcc gtgagagctg ctaatgtgct cttcagcctt
      241 acgtttcgct tccatggctc gcgcttcgtc gagatcctgg ccgcgaattg cggtgtcggc
      301 cagaacggtc acgttgccag gctgcacttc aagaatgccg ccagacagat agataaactc
      361 ttcgtgaccg tgctgtttca cgatgcgaat cataccaggc ttaatggcgg tgagcagcgg
      421 tgcgtggcca gggtagatcc ccagttcacc ttcgctaccc gttacctgga ttttctcgac
      481 cagaccagag aacatttgtt gctctgcgct gacgacgtcc aggtggtaag tcattgccat
      541 atcaccctcc gattaaggcg ttaaagtttt ttggcttttt ccacagcttc ttcgatggaa
      601 ccgaccatgt agaacgcctg ctccggcagg tgatcgtatt cgccttccat gatgccttta
      661 aagccacgga tggtgtcttt cagggagacg tatttacccg gagaaccggt gaatacttct
      721 gccacgaaga acggctggga caggaagcgc tggatcttac gagcacgcgc taccaccagt
      781 ttgtcttctt cagacagttc atccataccc aggatggcga tgatgtcttt cagttcctga
      841 taacgttgca ggatggactg aacgccacgc gcggtgtcgt agtgttcctg accaaccacc
      901 agcgggtcca gctgacggct ggtggagtcc agcgggtcaa cggccgggta gatacccaga
      961 gacgcgatct gacggctcag taccacggtt gcgtcaaggt gcgcaaaggt ggttgccgga
     1021 gacgggtcag tcaagtcatc cgcaggtacg tataccgcct gtacggaggt gatagaacca
     1081 gttttggtgg aggtgatacg ttcctgcaga acgcccatct cttccgccag ggtcggctga
     1141 taacctaccg ctgaaggcat acggcccagc agtgcggata cttccgtacc ggccagggtg
     1201 taacgataga tgttgtcaac gaacagcaga acgtcacgac cttcgtcacg gaatttctca
     1261 gccatggtca gaccggtcag agcaacgcgc agacggtttc ccggcggctc gttcatctgg
     1321 ccatacacca gggatacttt gtcgataacg ttggagtcgg tcatttcgtg gtagaagtcg
     1381 ttaccctcac gagtacgttc acctacgccc gcaaacacag agtaaccgga gtgctcgatc
     1441 gcgatgttac gaatgagctc catcatgttt acggttttac ctacacccgc accaccgaac
     1501 agaccaactt taccgccctt agcgaacgga cacatcaggt cgataacttt gataccggtt
     1561 tccagcagtt cctgagagtt tgacagctct tcgtaggaag gtgctgcgcg gtgaatcgcc
     1621 caacgctctt cttcaccgat ctcgcctttc atgtcgaccg gttcacccag tacgttcatg
     1681 atacggccca gagtcgcttt acctaccggg acttcgatcg ggtgttcgag gtcttttaca
     1741 tccagaccgc gacgcagacc gtcggaggaa cccattgcga tggtacgtac gataccgccg
     1801 ccgagctgct gctgaacttc cagcaccaga cgctcattac cattttgcac ctcaagagca
     1861 tcgtacacgc gcggtacggc atcctgaggg aattcgacgt caactacggc gccgattacc
     1921 tggacaatct ttccagtagc catcttaaat cctctacgaa ataacctgtt taaaccgcgg
     1981 cggcccccga gacgatctcg gtgagttcct gagtaatgct ggcctgacga gctttgttgt
     2041 ataccaactg cagctcttta atcaggctgc cgccattgtc ggtcgcggct ttcatcgcca
     2101 ccatacgggc ggcctgctcg ctggccaggt tttcaaccac gccctgataa acctgagatt
     2161 cgacataacg acgcagcagg gtatccagca acgccttcgg atcgggttcg tacaggtaat
     2221 cccaggattt atgtttcaga tcatcatcat ctgatgccgg taacggcagc aactggctga
     2281 tggtcggaac ctgagacatg gtgttaataa atttgttgct gacaatgtaa agcttgtcca
     2341 gacggccttc gtcgtaggcc tgcaacatca cttttaccgg accgatcagt tcggacaggg
     2401 aagggttatc ccccatgccg gtgacctggg caacaacatt gccgcccacg gagttgaaga
     2461 acgacacgcc tttcgagccg atcattgcga ggtcgcattg aacgcctttg tcggtccagg
     2521 tcttcatttc cgccagcagt tttttgaaca ggttaatgtt caaaccaccg cacaaaccac
     2581 ggtcggtcga caccaccagg tagcccacgc gtttaacgtc gcggtcttcc aggtaagggt
     2641 gcttatattc cagattaccg tgtgcaaggt gaccaatcac tttgcgcatg gtttctgcat
     2701 aaggacggct ggccgccatg cgatcctgcg atttacgcat tttggaagcg gcgaccatct
     2761 ccatcgcttt agtgatcttt tgcgtgttct ggacgcttgc gatcttacta cgtatctctt
     2821 ttgcgccggc catgagcttc tcctcaatgc cttgcggcct gccctaaggc aagccgccag
     2881 acgttaccag gattgggttg ctttgaagga atcgaggatg cctttcagct tgccttcgat
     2941 ttcgtcgttg tagccaccgg tctggttgat ctcttgcatc aacggagcgt gatcacggtc
     3001 gacgtaagcc agcagagcgg cttcgaagct gccgattttc gacagttcaa catccgccag
     3061 gtaaccacgt tctgctgcga acagaaccag agactgttgc gctacggaca tcggcgcata
     3121 ctgtttctgt ttcagcagtt cggtcacttt ctgaccgtgg tcaagctgct tacgtgttgc
     3181 atcgtcaagg tcggatgcaa actgagagaa cgctgccagt tcacgatact gtgccagagc
     3241 ggtacggata ccaccggaca gttttttcat gatcttggtc tgtgctgcac caccaacacg
     3301 ggatacggaa atacccgggt taaccgcagg acgaatacca gcgttgaaca ggttggtttc
     3361 caggaagatc tgaccatcgg taatggagat tacgttggtc ggaacgaacg cagaaacgtc
     3421 acccgcctga gtttcgataa tcggcagcgc agtcagagaa ccggttttcc ctttcacttc
     3481 acctttggtg aaggcttcaa cgtattcggc gttaacacgc gcagcacgct ccagcagacg
     3541 agagtggagg tagaatacgt cgcccgggaa tgcttcacgt cctggcggac gacggagcag
     3601 cagagagatc tgacggtaag caacagcctg tttagacagg tcatcgtaaa tgatcagcgc
     3661 atcttcaccg cggtcacgga agtattcgcc cattgcgcaa ccggcatacg gtgccaggta
     3721 ttgcagtgca gcggattcag acgcggttgc taccacaacg atggtgttag ccagtgcgcc
     3781 gtgctcttcc agtttacgta ccacgttaga aatggtggac gctttctggc cgatagcgac
     3841 atagatacat ttgataccgg aatcgcgctg gttgatgatg gcatcgatag ccagtgcggt
     3901 tttacctgtc tgacggtcac cgatgatcaa ttcacgctga ccacgaccga ttgggatcat
     3961 ggagtcaacg gctttataac cggtctgtac cggctgatct acggactgac gttcgataac
     4021 gcccggagcg attgcttcta cagcagagaa gccgtcgtga tccagcggac ctttaccgtc
     4081 gattggtgca cccagagtgt taaccacacg gcccagcagg ccacggccaa ccggaacttc
     4141 caggatacgg ccagtacact taactttcat gccttcggca aggtcagcgt acggacccat
     4201 aacaaccgca cctacagagt cgcgctcgag gttcagtgcg atagcgtaac ggttacccgg
     4261 cagggagatc atttcaccct gcatacaatc ggccaggccg tgaatgcgga taacaccgtc
     4321 acttacagaa acaatagtac cttcgttgtg agcttcactc acaacattga actgagcaat
     4381 gcgctgcttg atcagttcgc tgatttcggt ggaattcagt tgcatgctcc agtcccctta
     4441 agactgcaag acgtctgcaa ggcgctcaag acgaccgcgt acgctgccat caatgaccat
     4501 atcacccgct cggatgataa cgcctgccat tacagactta tcgattttgc aattcagctt
     4561 aactttgcgt gacagacgtt tttccatcgc agcagaaatt ttcgcgagct gttgttcact
     4621 cagtgcggca gcggaaatga cgtctacctc agcggtagcc tcactcacgg cacgaaggtg
     4681 aataaactgc tccagaacat ccgggagcgc gttaagacga ccattttcag ccattacccg
     4741 aatcaggttc tgaccgtttt cgtccagttg ctcaccacaa actgcgataa acgactcggc
     4801 gagcgtttct ggcgcaagcg cgccagagag aagctctgcc atttgttcgt ttttggttac
     4861 ctcggcggca aacgccagca tgtcctgcca gcgttctaca ctttggtgtt cgacggcaaa
     4921 gtcaaaagct gctttggcgt aggggcgagc taccgtaata aattcagaca tcagcccctc
     4981 cctccttaca gttcagcgac aagtttatcc acgatgtcgc tgttagcagc ttcatccacg
     5041 gaacgttcga tgatcttctc ggcgccagca acagccagga tagcaacttg cttacgcagc
     5101 tcttcacggg cacgtttacg ctcggcttca atttctgcct gcgcctgggc cacgatttta
     5161 gtacgttcct gttctgcctc agctttcgct tcgtccagaa tctgcgagcg gcgtttgttc
     5221 gcctgctcga tgattacctg ggcttccgct ttcgcttttt tcagctggtc ggtcgcgctg
     5281 gcctttgcaa ggtcaaggtc cttatgtgct cgttctgcgg aagcaaggcc gtcagcaatt
     5341 tctttttgac gtttttcgat ggctgccatt aatggcggcc atacgtactt catgcagaac
     5401 agaacgaaca ggacaaacgc gatggcctgg ccgaggattg ttgcgttaag attcacagca
     5461 caatgcctct atttagttaa cgttctgata ttgctcttta aataaaagca acgcttacta
     5521 cgcgacagcg aacatcacgt acagacccag acctacagcg atcatcggga tagcatccac
     5581 cagacccata acgataaaga actgagtacg cagcagagga atcagatcag gttgacgcgc
     5641 tgcgccttcc aggaatttac ccccgaggat gccgataccg atcgcagcac cgattgccgc
     5701 cagacccatc atcacagcgg cagccatgta cagcagatcc atattcaggt tttccatgac
     5761 agtctccagt ttgtttcagt taaaacgtag tagtgttggt aaattaatgt tcttcagacg
     5821 ccatcgacag atagacgatc gtcagaacca tgaagatgaa ggcttgcagc gtaatgatca
     5881 ggatgtggaa aatggcccac ggcacattca ggatccactg tgaccaccac ggcaacagac
     5941 cagcaatcag aatgaaaatc agctcaccgg catacatgtt accgaacagt cgcaaaccga
     6001 gtgaaactgg tttggacagc aggcttaccc cttcaaggat taagttgaca ggaatgaacg
     6061 cccagtgatt gaacggctgc agcgtcaact ctttcgtgaa gccgccgatg cctttcattt
     6121 tgatgctgta gaacagaatc aggataaata cgcccaatgc catagacagc gttacgttca
     6181 cgtccgcaga cggaaccaca cgcagtgcag gcagacccag tacatgttca gcaatgtacg
     6241 gcagcaggtc gataggcagt aaatccatca ggttcatcag gaatacccag acgaagatcg
     6301 tcagggccag cggagcaatc agcttgcttt tgccatggta catgtctttc acgctaccat
     6361 taacaaagcc gatcaccagc tcaatcgcgg tctgaaactt acctggcaca ccgctggtcg
     6421 cctttttggc tacgctacgg aataaaacca ggaacaacag acccagcacc accgagaaga
     6481 acatggagtc aatattgatt gtccagaagg tggctggggg gttttgtgga tccaccagcg
     6541 agaatgtacg caggtccagc tgaaggttat tcaggtggtg tcctatgtaa tcctgcggcg
     6601 tcatattttc tgaagccatg atgcctttta ccctttgttg ttaattacag ccggtgccag
     6661 tatctgaacc accagcacca aaacccacgt aacgatcagc ggcaagaata ccgcctttaa
     6721 aaccgccaac gccaccacca gtaacaccaa catcgccaga actttgaaag cttcgccaaa
     6781 tgcgaatgtc caggccaccc ggcctttcgc tggtgtatgc gcctggtgac gccaggcaaa
     6841 tatcataaac aaaacgttag gcagaaagac tgccaggccc ccgcttattg cagagacgcc
     6901 ccagaagggg tctttgaggc tgaacagcaa tccacttgct atcaccacca gtaactgaac
     6961 gagcagaagc ttccgagcca cgtttcgact cacgagcgac acagacatca cgtttttcac
     7021 tcctgctccc ttcgaggtat gccgcgtgtc gtataaaact ttctttaagg cttagagtca
     7081 agcatcaaaa agcggtcaaa ttatacggtg cgcccccgtg atttcaaaca ataagtagcc
     7141 aaaaggtgaa taaatgttta aatatttttc caatgcatac aattgcgact tttctgctaa
     7201 ccatgttcga tcatgaaaaa ctgtaaataa cgcgtaaaca ctggtgataa agcgtgcttc
     7261 agatcacata ttgcgcatgt tcgcgcacag catatttatt tacttggcaa atgatgcctt
     7321 tgcaagttta tgatatttca gtctaaaaac agatactgtt ttaataaatg acatttacac
     7381 aacaaaaacc acccattgac atttttaata atattttaac agctaatgat ggttcttagc
     7441 gccgattttt agcagactga tattttcact aatgacttat tttctgctta ccaaaaaaag
     7501 ccacgttatc ttgttgatgc aaaagagtga acgtggcgtt aaatgtaacc agttatatca
     7561 gtagaaaacc tggttgttgt taacagtcta accggtcaat tttttatgat ttttttgata
     7621 aaaattaaat tttatttgct ttaatcacca ccagatgacg tacgccatcc agggctggaa
     7681 cctgaagttt aaccactgat tcgacctgat attcttcggg caacaaagcg atttcatctt
     7741 ccggcatttg ccctttcaga gcgtagaaac ggccttgctc accaggaaga tggtggcacc
     7801 agctcaccat atcgttcaga gaggcaaaag cgcggctaat tacgccatca aatggcggct
     7861 ctgaaggaaa ctcttctacc ctgctctgta ctggcccaat attctccagt ttaagctcat
     7921 gttgcacctg acgaaggaaa cgcacgcgtt taccaaggct atccaacaga gtgaaatggg
     7981 cttcaggacg cacgatagag agtggaatgc caggcagtcc tggtccggtg ccgacatcga
     8041 taaaccgttc accttgcaga tacggtgcca ccacaatgct atcgagaata tggcgtacca
     8101 gcatctcatt aggatcgcgg accgaagtca ggttgtacgc tttgttccat ttatgcagca
     8161 tattcacgta ggcaataagc tggtttttct ggtgatcggt aagcgaaata cctgcgtctt
     8221 tcagcagtaa ggaaagtttg ttgagcacgg tgattacctg ttcttgatgc gttgcctggt
     8281 aagcgggggc ttaccaggca tttttaatgt gttatgcgct acgacgcagc ataccctgtt
     8341 ttttcagcca caccagcaga atggagatgg ccgcaggcgt gacaccagaa atacgtgaag
     8401 cctggccgat agaggccggt ttgtgatcgt taagtttggc gatcacttcg ttagaaagac
     8461 cggatacctg gcggtaatcc agtgtcgcgg gtagcagggt gttctcgtta cgcagctgct
     8521 tttcgatctc atcttgctgg cgcgcgatat aaccttcgta tttaacctga atctcaacct
     8581 gttccgccgc ctgttcgtct gtcaacgcag gggcaaacgg cgtcagcgtg gttaattttt
     8641 cataagtcat ttccggacga cgcagcagat cttcaccact ggcttcacgg gaaagcggcg
     8701 cagtcaggtg agcattcact tcggctgcag cttccgccga cggggttacc caggtcgatt
     8761 tcagacgctg acgctcacgc tcgatattct caagtttctc gttaaagcgc gcccaacgtt
     8821 cgtcatccac caagcccagt tcacgaccga tttcagtcaa acgcagatcc gcattatctt
     8881 cgcgcagcat cagacgatat tctgcgcgcg aggtaaacat acgatacggt tctttggttc
     8941 ctaaagtgca caggtcatca accagtacgc cgagatacgc ctgagaacgc gccggagccc
     9001 aaccttcttt gtcagcagac agacgggcag cgttaagacc ggccagcaaa ccttgcgcag
     9061 cggcttcttc gtaaccggta gtgccgttaa tctgaccagc aaagaacagc ccctggataa
     9121 acttgctctc cagcgtcggt ttcaggtcgc gtggatcgaa gaagtcatac tcaatggcat
     9181 aacccggacg cacgatcttc gcgttttcca tcccctgcat ggagcggacg atttgcatct
     9241 gcacatcgaa cggcaggctg gtggagatac cgttcggata aatttcgtta gaggtcagcc
     9301 cttccggttc aaggaagatc tgatgctgat ttctgtcggc gaagcgcatg actttgtctt
     9361 cgatcgacgg gcagtagcgt gggccgacac cttcgatcac ccctgcgtac attgggctac
     9421 gatcgaggtt actgcagatc acatcatggg ttttctcgtt ggtatgggtg atataacacg
     9481 gcacctgctg tggatgctgg gacgcattgc ccataaaaga gaataccggc attgggttat
     9541 cgccatgctg ttgcgcaagc actctaaagt cgatggttcg agcatcaata cgcggtggtg
     9601 tcccggtttt cagacgacca acgcgtagcg gaagttcacg caaacggcga gaaagcggaa
     9661 tggacggcgg atcaccagca cggccaccgc tgtagttatc cagaccgata tgaattttac
     9721 cgtcgaggaa cgtcccaacg gtgagcacga cggctttggc acggaacttc agtcccattt
     9781 gggtaacagc accgaccaca cgatcgtttt cgacaataag atcttcaacc gcctgctgga
     9841 agatcatcag gtccggttgg ttctccagcg ctgtacgtac cgcctgacgg tagagcacac
     9901 gatccgcctg agctcgggta gcgcgaaccg ctggcccctt gcttgcgttt agtatcctaa
     9961 actggatacc cgcctgatcg atcgctttcg ccatcagacc gccgagtgca tccacttctt
    10021 ttaccagatg tcccttccca ataccgccga tcgccgggtt gcagctcatc tgccccagag
    10081 tgtcgatatt gtgtgtcaaa agcagagtct gttgacccat acgcgccgca gccatcgcgg
    10141 cctcggtgcc tgcatgaccc ccgccaatga tgatgacgtc aaaaggatcc ggataaaaca
    10201 tggtgattgc ctcgcataac gcggtatgaa aatggattga agcccgggcc gtggattcta
    10261 ctcaactttg tcggcttgag aaagacctgg gatcctaggt attaaaaaga agatctattt
    10321 atttagagat ctgttctatt gtgatctctt attaggatcg cactgccctg tggataacaa
    10381 ggatccgact tttaagatca acaacctgga aaggatcatt aactgtgaat gatcggtgat
    10441 cctggaccgt ataagctggg atcagaatga ggggttatac acaactcaaa aactgaacaa
    10501 cggttgttct ttggataact accggttgat ccaagcttcc tgacagagtt atccacagta
    10561 gatcgcacga tctgtatact tatttgagta aattaatcca cgatcccagc cattcttctg
    10621 ccggatcttc cggaatgtcg tgatcaagaa tgttgatctt cagtgtttcg cctgtctgtt
    10681 ttgcaccgga atttttgagt tctgcctcga gtttatcgat agccccacaa aaggtgtcat
    10741 attcacgact gccaataccg attgcgccaa agcggaccgc agaaagatcg ggcttctgtt
    10801 cctgcaatgc ttcatagaaa ggagaaaggt tgtccggaat atctccggca ccgtgggtgg
    10861 agctgataac cagccagatc cccgaggcag ataaatcttc caacagcgga ccgtgcagcg
    10921 tttcggtggt aaaacccgcc tcttccagct tttcagccag gtgttctgct acatattcgg
    10981 caccgccgag ggtgctgccg ctgataagag tgatatctgc cataaaccgc cacctttatt
    11041 aagagtggcg tattgtacgc tgtgaacgcg ttgggatcta cctgtggaaa agtatgggat
    11101 taaaaaagcc gatcagggct tgatggtacg catgatcggg ttttgcagga cgatcaatgt
    11161 ctcagtggac tgaatttcat caattgtttg gatcttgttg ataagtacat gctggagagc
    11221 gtcgatcgaa cggcacataa cttttataaa gatgctgtag tggccggttg tgtaataggc
    11281 ttcagtgact tcatcaaggc tttccagctt tgccagcgcg gaagggtagt ctttggcgct
    11341 ctttaatata atgccgataa agcagcctac gtcataaccg agctgcttcg ggctgacatc
    11401 aatacgcgcc ccggtaatga tccccgcctg cttcattttc tctactcgaa cgtgaatcgt
    11461 ccccggactg acgccaaatt gtttcgccag ttcggcgtaa gcggtgcgcg cattgcccat
    11521 taatgcttcc aggatgccac ggtccagatt gtcgatcaga taattttcca taggattttc
    11581 ttatgcagat tgatgattca ttctatttta gccttctttt ttaatgaatc aaaagtgtgt
    11641 taggcttttt attgaatgat tattgcatgt gtgtcggttt ttgttgctta atcataagca
    11701 acaggacgca ggagtataaa aatgaaaacc gcttacattg ccaaacaacg ccaaattagc
    11761 ttcgtgaaat ctcacttttc ttgccaactg gaagaacgtc tggggctgat cgaagtccag
    11821 gcgccgattc ttagccgtgt gggggatggc acgcaggata acttgtcggg ctgtgaaaaa
    11881 gcggtgcagg taaaagtgaa agctctgcct gatgcccagt tcgaagtggt tcattcactg
    11941 gcgaagtgga aacgtcagac cttagggcaa cacgacttca gcgcgggcga agggctgtac
    12001 acgcacatga aagcccttcg ccccgatgaa gaccgtcttt ctccgttgca ctcggtctat
    12061 gttgaccagt gggactggga acgcgtaatg ggcgacggtg agcgtcaatt ctcgactctg
    12121 aaaagcacgg tagaggcgat ctgggcggga attaaagcaa ccgaagctgc ggttagcgaa
    12181 gagtttggcc tggcaccgtt cctgccggat cagatccact tcgtacacag ccaggagtta
    12241 ctgtctcgtt atccggatct cgatgccaaa gggcgtgagc gggcgatagc gaaagatctt
    12301 ggcgcggtat tccttgtcgg gattggcggc aagctgagcg atggtcatcg ccacgacgtg
    12361 cgcgcaccgg attatgatga ctggagcacc ccgtcagagc tgggtcatgc gggtctgaac
    12421 ggcgatattc tggtgtggaa ccctgtactg gaagatgcgt ttgagctttc ttccatgggg
    12481 atccgcgtgg atgccgacac gttgaagcat cagttggcgc tgaccggtga tgaagatcgt
    12541 ctgcatctgg aatggcatca ggcgctgctg cgcggtgaaa tgccgcagac catcggcggc
    12601 ggtatcggcc agtctcgttt gaccatgctg ctgctgcaac tgccgcatat cggccaggtt
    12661 cagtgtggtg tatggccagc tgctgttcgc gagagcgtcc cttctctgct gtaataattt
    12721 atcgccgcca gcgtctgagc aggcggcttc gcatcccggt atcaaagcgc cagatatgat
    12781 cgaaaatgcg catgatgccg ggtttgccgt gtgccgacat cgccacggca tgaaagcgat
    12841 gctgatgtac ccgctgcagc tctttcactt tactcgtcac gtcgtcaggc aaccgctgag
    12901 cgataaaatc agaaatcacc accgcatcgg catcaaacca ttccctgctt tgcaagcgtt
    12961 ccataatggc gcgaaaacaa ctggcaagat cggtgccgcc acgaaactgc tggcttaaaa
    13021 aacggattgc tt
//
LOCUS       DAJVTL010000119        12612 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.121, whole genome shotgun sequence.
ACCESSION   DAJVTL010000119 DAJVTL010000000
VERSION     DAJVTL010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12612
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.121"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..778)
                     /locus_tag="OQQ26_003344"
     CDS             complement(<1..778)
                     /locus_tag="OQQ26_003344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003846582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HCS1858695.1"
                     /translation="MYKKKTLSLKDYNSLTLNIGELTDSENRLNDYIKVHFNELPYHG
                     IVDLSQNATVSKATIGRFLNKIGFTGYSAFKKALDISLLENKMASPYEQKIKQRCKTE
                     ITTESSVGEFTQKSISLLNIFHDNINVENINRLINFILDNKRHIYVVGPSSSHAMAIH
                     FCTLLKYFRGGITLLPTDISQLPKCMINIQEDDVLIVFSYYRFNRVVLNIAKWFKKKN
                     ATVVLVTNADTNPYGKFCEMQFVLPSNVQSIFQSRLLGFFF"
     gene            1104..2471
                     /gene="dcuC"
                     /locus_tag="OQQ26_003345"
     CDS             1104..2471
                     /gene="dcuC"
                     /locus_tag="OQQ26_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001656378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HCS1858696.1"
                     /translation="MTAFIIAILITVIAAWLIVKNYQPQTVLLLAGLALLTITVLFYP
                     ENNILYGKAKSTGSTWLDIFSFAKESLTTQIAGIGLIIMAAGGFASYMDHIKASNAMV
                     NMCIRPLQVIKEPYLILALGYICAQLLHVAISSAAGLAMLLLVTFFPVLVRLGVSKAS
                     AAAMIGLCAFMDLGPAVGTANLAAKHSGMESAIYFAHYQMPVAVVVMLAVAVTIFFTA
                     KYYDKKDGFIASEQFITETVAEERKVPALYAILPVLPVVLVLVFSPLVIDKIKIDVVT
                     AMILGAVIAFIFELITTRDFKNCCKGFQVFFKGMGSMFTSIVSLLVCAYIYAQGLQKI
                     GAVDYLLQSVQNAGLGFTSMTLVMTALVGITAVMTGSGVAAFFSFSGLAPSIAAKFGE
                     SAVSMILPMQLMAGMGRSMSPVAGIIIAVSKAGECSPFMIVRRTLFPALAGIIAMLIA
                     NYVLF"
     gene            2474..4171
                     /locus_tag="OQQ26_003346"
                     /pseudo
     CDS             2474..4171
                     /locus_tag="OQQ26_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002440965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
     gene            4250..4603
                     /locus_tag="OQQ26_003347"
     CDS             4250..4603
                     /locus_tag="OQQ26_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HCS1858697.1"
                     /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFAYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTMRHLIDDKRP
                     VPELPEKYRPKKPRE"
     gene            complement(4640..6708)
                     /gene="flhA"
                     /locus_tag="OQQ26_003348"
                     /pseudo
     CDS             complement(4640..6708)
                     /gene="flhA"
                     /locus_tag="OQQ26_003348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311614.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
     gene            complement(6782..7792)
                     /gene="hypE"
                     /locus_tag="OQQ26_003349"
     CDS             complement(6782..7792)
                     /gene="hypE"
                     /locus_tag="OQQ26_003349"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation carbamoyl dehydratase
                     HypE"
                     /protein_id="HCS1858698.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
                     QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGTIPRYLSCGFILEE
                     GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWG
                     AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
                     LRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLV
                     IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            complement(7789..8910)
                     /gene="hypD"
                     /locus_tag="OQQ26_003350"
     CDS             complement(7789..8910)
                     /gene="hypD"
                     /locus_tag="OQQ26_003350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HCS1858699.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
                     AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
                     QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQENEA"
     gene            complement(8910..9182)
                     /gene="hypC"
                     /locus_tag="OQQ26_003351"
     CDS             complement(8910..9182)
                     /gene="hypC"
                     /locus_tag="OQQ26_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HCS1858700.1"
                     /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
                     GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK"
     gene            complement(9173..10045)
                     /gene="hypB"
                     /locus_tag="OQQ26_003352"
     CDS             complement(9173..10045)
                     /gene="hypB"
                     /locus_tag="OQQ26_003352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HCS1858701.1"
                     /translation="MCTTCGCGEGNLYIEGDKHNPHSAFRSAPFAPAARPQMKITGIK
                     APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     KQLVLNLVSSPGSGKTTLLTETLVRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
                     MDQWLNWLETQRCA"
     gene            complement(10049..10399)
                     /gene="hypA"
                     /locus_tag="OQQ26_003353"
     CDS             complement(10049..10399)
                     /gene="hypA"
                     /locus_tag="OQQ26_003353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HCS1858702.1"
                     /translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
                     AFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
                     DDGLQIRRIEIDQE"
     gene            10610..11071
                     /gene="hycA"
                     /locus_tag="OQQ26_003354"
     CDS             10610..11071
                     /gene="hycA"
                     /locus_tag="OQQ26_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase regulator HycA"
                     /protein_id="HCS1858703.1"
                     /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
                     AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGM
                     IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA"
     gene            11196..11718
                     /locus_tag="OQQ26_003355"
                     /pseudo
     CDS             11196..11718
                     /locus_tag="OQQ26_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417204.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
     gene            11715..>12612
                     /locus_tag="OQQ26_003356"
     CDS             11715..>12612
                     /locus_tag="OQQ26_003356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311606.1"
                     /note="catalyzes the oxidation of formate to carbon
                     dioxide and molecular hydrogen; formate hydrogenlyase
                     comprises of a formate dehydrogenase, unidentified
                     electron carriers and a hydrogenase (subunit 3); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HCS1858704.1"
                     /translation="MSAISLINSGVEWFIAAAVLAFLFSFQKTLSGWIAGIGGAVGSR
                     YTAAAGFTVLTGAVGVSGALSLVSYDVQITPLNAIWLITLGLCGLFVSLYNIDWHRHA
                     QVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEVMALCAVFLTSNSKEGKLWFALGRL
                     GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV
                     PQAHANASAPDAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGL
                     YALMEHNIQRLLAYHTLENIGII"
BASE COUNT         3051 a         3025 c         3202 g         3334 t
ORIGIN      
        1 tgaaaaagaa tcccaaaagg cgactttgaa agattgattg aacattgctt ggtaatacaa
       61 attgcatctc acaaaatttc ccatatgggt tggtatcagc attggtgacg agaactacag
      121 tcgcattttt ctttttgaac catttagcaa tattcagtac tacccggtta aagcgataat
      181 atgagaagac gattaataca tcatcttctt gaatgtttat catgcattta ggaagctggc
      241 tgatgtctgt cggaagtaac gtgattccac ctcgaaaata ctttagcaaa gtacaaaaat
      301 ggatagccat agcatgagac gatgaaggac caactacata gatatgtcgc ttattatcta
      361 atataaaatt aatcagtcta tttatattct caacattaat attatcatgg aatatattga
      421 gtaatgatat ggatttttgc gtaaactcac ctacactact ttcagtagtg atttctgttt
      481 tacatcgttg ttttattttt tgttcataag gggaagccat tttattttcc aggagtgaga
      541 tatccagagc ttttttgaac gcggaatatc cagtaaaacc aatcttatta agaaagcggc
      601 caattgtagc cttacttacc gttgcatttt gtgataaatc aactatccca tgatagggta
      661 attcattgaa atgtacttta atatagtcgt taagtcgatt ttcagaatct gttagctctc
      721 ctatattcaa agtcaatgaa ttatagtctt tcagacttaa tgttttcttc ttgtacatag
      781 ataccccctg taaagtaaaa tacttcatta gattgttata aaatactctt ttatctgcgt
      841 caatctttct ttcattaaat gggaagacgc ttccatatct tttatcaaca aacacaatca
      901 tattaagagg atgagatcct actcacaaaa aagagcggga aaaggtattt cccatatttt
      961 catctgttat atgtcgttac acttgaatgg tatcgtaaaa tgttaggggc gttccctaaa
     1021 tgtaatgatt agctttgttg atttttgatt gcaaggcgaa attttaatgt aagtctgatt
     1081 tgcatggtat agggattgtt attatgactg cttttattat agcaatattg ataacagtta
     1141 ttgcagcctg gttaatcgtc aaaaattatc agccgcaaac tgttttgtta ctcgcaggat
     1201 tagcattact caccattact gttctcttct atccagagaa caatatttta tatggcaaag
     1261 ccaaatccac cgggtcaact tggttggata tcttcagttt cgctaaggaa tcactgacta
     1321 cacaaattgc aggtattggc ttgattatta tggctgctgg tgggttcgcc agttatatgg
     1381 accatattaa ggcatcgaac gcaatggtaa acatgtgtat tcgcccccta caggtaatca
     1441 aggaacctta tctaatcctt gcgttaggct atatttgtgc acagttatta catgttgcaa
     1501 tatccagcgc tgcagggttg gcaatgttgc tattagtgac tttcttccct gttctggtac
     1561 gtcttggggt gagtaaggcc tctgctgccg caatgattgg gctttgcgca tttatggatc
     1621 ttggccctgc agtaggaacg gcaaatctgg cggcgaaaca ttctggtatg gaaagtgcaa
     1681 tttattttgc ccactatcaa atgccagttg ctgtagtggt tatgttggct gtggcagtaa
     1741 cgattttctt cacagcaaaa tactacgaca agaaagatgg ttttattgcc agtgagcaat
     1801 ttattactga aacggtagct gaagagcgaa aagttcctgc tttgtatgca atattacctg
     1861 ttttaccagt ggtacttgta ttggtattta gtccattagt tattgataaa attaaaattg
     1921 atgtcgttac tgcgatgatc ctcggagccg taattgcttt tatctttgaa ctgataacca
     1981 cgcgtgattt caagaattgt tgtaaaggat ttcaggtttt ctttaagggc atgggaagta
     2041 tgtttaccag catagtgtcg ttattagtct gtgcttatat ctatgcgcaa gggttgcaaa
     2101 aaattggcgc ggtggattat ttactgcagt cagtacaaaa tgcagggctc ggctttacca
     2161 gtatgactct ggtgatgacg gcgttggtag ggattactgc tgttatgacc gggtctggtg
     2221 tggcggcatt tttttccttt tccggtctgg ctccctcaat tgcggcaaaa ttcggcgaaa
     2281 gtgccgttag catgatatta ccaatgcagt tgatggctgg aatggggcgt tctatgtctc
     2341 cggtggcagg cattatcatt gctgtaagta aagcaggtga gtgttcgcca tttatgattg
     2401 tcagaaggac tttgtttccc gcacttgcag gtattattgc catgctaatt gcgaattatg
     2461 ttttatttta accatggata acaaaaaaat ggttgatgtt ttatatattc cattaacggg
     2521 gagtttattg ctcgaatctc cgttgctgaa taagggtagc agctttacaa agcaagaacg
     2581 ccatgatttt aatctcaatg gattgctacc tgattcagtt gaaaatattg aagagcaagc
     2641 tgagagggca tatcaacaat ataatgaagt aaataatgaa agtgcaaaac atatatactt
     2701 acgtaatatt caggatacta acgaaacatt attttattat ttattgaaaa aatatttatc
     2761 agaaatgcta cctataatct atacgccagt ggtcggtact gcgtgtgaga aatattcatg
     2821 gatgtaccga cgatcccgtg gagtatttat ttcctggtcg gatcgcgaac gcattgatga
     2881 tattttgcat gacattgccg cgcaagatat caaagtaatc gtggtgactg atggagaaag
     2941 aatactgggg ctgggtgatc ttggcgttgg gggaatggga attccaatag gtaaattgtc
     3001 tctttacaca gtttgcggtg gtattaatcc ggcgcagact ttgccaataa tgctggatgt
     3061 aggtacaaat aatccgcaat tgctccaaga cccgagatat ctcggctggc ggcatccacg
     3121 tgttacaggt gaagattatt acgcttttat cggtatgttt gtcgcggctg taaaacgtcg
     3181 ctggcctaca gttttgctgc aatttgaaga tttcgcccag catacggctg ttcccttgct
     3241 aaaacgttat cgcgacgaac tctgctgctt taatgatgat attcagggta ccgcttctgt
     3301 ggcactggca acgcttcttg cggcttgtcg cgggatccat cgcgacttta atagccaacc
     3361 gatggtcatt gtaggggcag gagctgctgg atgtggtatt gcacagcata tcgtcacttg
     3421 tcgaatggct gacggtttaa gtgcagagga ggcgcgaaga accatctata tggtagatcg
     3481 agatggttta gtgatgtctg atagcccttc gttagcagat tttcaacgtt cccttgcgca
     3541 tgcgccagaa tcactcaaag agtgggacta ttacgggaaa acgccaaatc tgctggatgt
     3601 ggtatgtaat gcgaagcccg cgattatgtt aggtgtttcg gggcaaaggg gtttattcac
     3661 agaaaagctg attcgcgaaa tgcatcatca ttgtgaacga ccaataatta tgccgctctc
     3721 taatccaaca tcccgcatgg aagctatgcc agaggattta ctacgctgga cagacggtaa
     3781 cgccattgtt gcaacgggta gcccttgcga agccgtctct attaacgatt gtattattac
     3841 gatatcgcag tgtaataaca tctacatttt cccggcggtt ggccttggtg tgacgataag
     3901 tggtgcgtca agaggagtca cagaagcaat gttaatggca gccagctatg ctcgtgcaaa
     3961 tgtttctcct tttgttaata caggagaggg cgaattactt ccagcgatgg aaaacttgtg
     4021 tgatatcacg cgtcatattg catttaaagt tgcttaagcg gctcagtttt cgggcgttgc
     4081 tgatggcatg gatgatgcaa cgctcctcca acgtattgaa gataattatt ggctacctca
     4141 atatcgacca taccgtcggc gagcaattta agcgtcgtta tgtaacatga aacatagctg
     4201 cctgcatgat taagatgtat tatttttgca acttatttat ggaggcagca tgtccggcaa
     4261 gcgtatctct cgtgaaaaac tgacgattaa aaaaatgatc gatctttatc aagcgaaatg
     4321 cccgcaggcg tcagcggagc cggagcatta cgaggcgttg tttgcttacg cgcaaaagcg
     4381 gctggataaa tgtgtgttcg gcgaagagaa accagcctgt aagcagtgtc cggtgcactg
     4441 ttaccagcct gcaaagcgtg aagagatgaa acagattatg cgttgggccg ggccgagaat
     4501 gctgtggcgt catccgatct taaccatgcg tcatctcatc gatgacaagc gtccggtgcc
     4561 agaactgccg gaaaaatatc gtccgaaaaa acctcgtgaa tagtatgccg gacaggcaga
     4621 tctgtccggc aatttgcagt taaatcaatg ccgatttatc aattccaagc cgcttcatcc
     4681 gtgacagcaa ggtcgtgcgt ttcagcccca gacgttgcgc agcgccttta ggcccggcaa
     4741 ccacgccgtt ggtttctttc agcacgcgaa caatcaactg atattcatct tcgccctcct
     4801 gggcgacaac cgttgcggca ggcggcgttt caggttccgg taaaacaata tctggcaatg
     4861 acagctgcag cacgttgccg cgtgttagca ataccgcgcg ctcaatgaca ttttccagtt
     4921 cgcgtacgtt acccggccac tccatattgc tcaaggtgcg cagtgtctcg gcaggaatgc
     4981 tgtcgatatt gcgccccaga cgacgggcaa ttttgaaggt aaaggctttc gccagcagcg
     5041 gaatatcttc cggacgctcg cgtagtggcg gcaggttaat cgggaatacg ttcaggcggt
     5101 aatagagatc gctacggaac tcacggtcgg cgaccatttt tttcagatcg cggttagtcg
     5161 cggcaattaa acgtacatcc gtctgaatga ttttgttgct gccgagacgt tcaaactcct
     5221 gttcctgcaa tacacgcagc aacttcggct gtaactccag tggcatatcg cccacttcgt
     5281 tgaggaacag agagctttta tccgccagtt caaaacgacc aatgcgctgg gcgctggcac
     5341 cggtaaaagc cccacgctca tgaccaaaca gatcgctttc cagcaatccg gcaggcatcg
     5401 ccgcgcagtt cattttgacc atgcggcgat tattacgccc actgagatta tggatcgcac
     5461 gggcaatcag ctctttaccc gtgccagttt caccgaggat cagtacggta ctgtcacttt
     5521 gcgccaccat ttcaacttgt ttaagcacgc tgtacatggc ttcgctgcgg ccaataatct
     5581 cgccaaattc actatcaaca ttgttgagct gctcggtcag ggcgaggttt tcatcaacca
     5641 gccgttcttt cagacgatgg atttcctgat aggcgagggc gttatcgaca gcgattgcca
     5701 cacgttcggc aatctggcgc agcaaattca gattggtagt ggtaaacact ttctcttcgc
     5761 attgcgccag tttcagcacg cccagcatgg tgtcgccaga catcagcggt aacaggcaca
     5821 aggtttgaat ctggttgccc caggtgtcga acaacatgcg ttcatagggg gctaaatcgt
     5881 cccgctcgtg gagattgatc agcagcatct ctttactttt gaacacgcgt tcggtgaggg
     5941 ttccggcttc atcgacttcg ctctgttcgt gggcgggatg ttgtttatca agatagtgag
     6001 tggagtagat gttgagtttg tttttacggt ggctgcgtaa gacgatactg atatcgtcaa
     6061 tgtcgaaata gtaatggatt tctttggcga cttcgctgac cagttcgtcc atatccaggc
     6121 gggaaagcac cgcgttggtg atggcgacca ggatgcggaa gttatcgcgt tcccggcata
     6181 acaactcata gtcgacattg ttaacgacgc ggctctggat ttgttcggtg acgacagaaa
     6241 cgatctgcgt aaatgtttgc agacgattga actctttttc gctccagggg cgatcgtcat
     6301 aacgaataaa ttcatagcca ccaaaaatat gcccttccgc cgccagtggc atcaggcaat
     6361 agtgaccaaa tttggggtat agcccacctg cggccaggtt tcacaaaatt cttcgtaact
     6421 gcaatgcagc gtatcagggc gcgacaaaat gctgcgtacc ggaccgtgtg ccagaacagt
     6481 ttcgtcttca tatttaatgg gggtgtcttt ttcacgcgac gcgtaataag acgcacgttg
     6541 agtctgcgct tgccacaaca caatagccgc gttgtcggcg agcgcagaac gctttaccag
     6601 ttgcgaaaga gcctcacaca gcgaggccag atcgggctgc tgcaatagtg tccgagtgat
     6661 gtcgaacaac ccttgctgtc cgagatcact catcggtgta tatgacattt tgttcttcca
     6721 ggaaagcacc gcaaagcggt gcaaaaggtc attgactaac tataggagat ttagaatttt
     6781 attagcatat acgcggaagc ggttcggcgt gtggtaaatc gagggttcgt ttcacgccat
     6841 acagaccggc aagacgaaca cctttacgtt ccaccacttc accaatcagc gccgcgtctt
     6901 tccccagtgg atgggaatgt aacgctgcca gcacttgctc tgccgcgttg cgttcaacgg
     6961 cgatcaccag tttgccttcg ttggcaaagt tcagggcgtc cagtcccagc aattcgcaaa
     7021 cgccgcgcac ggcaggttta accggcagcg ctgattcaga aatttcaata ccgcaaccgc
     7081 aggctgccgc gaactcatga accaccgcgt ttacaccacc acgggtggca tcacgcagcg
     7141 ctttcacgcc gggaatgtcg cgcagcgtct gaatcagcgg cgtcagtacc gcgcagtcgc
     7201 tgaccagttc accatccagc cccagttgtt cacgcaggtt aaggatagtc gccccgtggt
     7261 cgccgagtgt accgctaacc agcaatacat cgcctgcggt tagtgtctgt gcgccccagt
     7321 gaatattcgc cggaattgcg cccatgccag cggtgttgat aaacagttta tctgccgcgc
     7381 cgcgctgcac cactttagta tcgccagtaa cgatggcaat gcctgccgtg cgggcggttt
     7441 ctgccatgct ggtcactacg gctttcagtg tctccatcgg caatccttct tcgaggataa
     7501 agccacagga gagatagcgc ggaatagtgc cactgaccgc aacgtcattc gcggtgccgc
     7561 aaatcgccag cttgccgata ttaccgccag gaaagaacag cgggtcaatg acgtaactgt
     7621 cggtggagaa cgccagacgg tcgccttccg ctaccagctg cgccagatca agacgggcct
     7681 gatcttcctg ttctgccagc cacgggttgg caaaggcttc cataaacagg ctgttgatta
     7741 attgctgcat cgcctggccg ccgctgccgt gggcgagttg gatattattc acgcttcatt
     7801 ctcctgctga cgatactgat accacgcggc gcacgctcct tcggaggaga ccatcagtgc
     7861 accaaatgcg gtttgaggat tacaggtgtt accaaacagc gggcattgat gcggcttaca
     7921 tttgcccgtt aatacctcac cacaacgcgc gcgcgggtca tcgcagacct gctgcggtgc
     7981 cgggcggaaa tgtgcttcgg catcgaatcg ttgataatcc ggcgtcaggt gcacgccaga
     8041 agattcaatc acgcctaagc cgcgccattc gctgtcgccg ttgacacaga acacatcagc
     8101 aattgcctgt tgcgccagca ggttaccggc atccggtacc acccgacgat actgattctc
     8161 taccttgctg tgggccgcta ttttctgctc caccagcatg accacgcctt gcagtagatc
     8221 aaggggttcg aaaccagcga ccaccagcgg acgatgaaaa tcgctggcga taaaattata
     8281 ggcatcagtg ccgataacca tactaacgtg gcccggcgcg aggaacgcgt cgataccgtt
     8341 atccggctgt tccagcaaac tgcgcagcgt cgggataagc gtaatgtgct ggcagaagaa
     8401 gtaaaaattc tgcacatcac gcgctttcgc ctgttgcaga gtgatggcgg tggtcggcat
     8461 ggtggtttca aaacctaagc cgaagaacac cactttgcgg gttggattct cctgcgccag
     8521 tttcaacgca tccatcggcg agtaaacgat gcgcacatcg gcaccgcgtg cttttgcctg
     8581 caacagcgat ccctgtttcc ccggcacgcg catggcgtcg ccaaaggtac agaagatgac
     8641 ttccggatgg ctggcaatct ccacgcaggt gtcgattctg cccatcggca gtacgcacac
     8701 cgggcaaccc ggaccgtgga taaactcaac gttttcaggc agtaactggt cgaggccgaa
     8761 tttaaaaatg gcgtgggtat gaccaccgca cacttccata atccgcagag ggcgttcggc
     8821 ggtgtaagag agatgtgaag cacgttcgcg cagatgctca attaactgca tcacctgttc
     8881 cggcgcgcga tattcatcaa caaaacgcat tatttttcct cgccatacaa cagcgcgccg
     8941 acatccggct caacgtcaaa catgttttgt aaggcgtcga gagtgtcgcg cgcttcggct
     9001 tcattaatta cgctcatggc aaagccaacg tgaaccagta cccactggcc cacgcgcggc
     9061 tgaccgtttt catcgcagct gccgactaac gttaaatcga catcgcgctg aatgccgcag
     9121 acgtcgactt ttgcctggtt gccgtcaatg gtgcggatct ggccgggaac gcctatgcac
     9181 atcgctgtgt ctccagccag ttcagccact ggtccatccc ttcgccgctg gtggcggaaa
     9241 taaggatgat ttcaatttct ggattgactt cgcgggcgca ggcgatgcac ttctcaacgt
     9301 caaagttgag atacggcaaa aggtcaactt tgttgagcag catcagcgag gcggcggcaa
     9361 acatatgcgg atatttcagc ggtttgtctt caccttcggt aacggaaagc accgctactt
     9421 tgtgtttttc accgagatcg aagctggccg ggcatacgag gttgccaacg ttttcgataa
     9481 acagaatacc gttatcgtcc agtggaagac gcggtgcggc gtcggcaatc atctgtgcgt
     9541 caagatggca gcctttaccg gtgttcacct gaatcgctgg tgtaccggta gcgcgaatgc
     9601 gtgcggcatc gttcacggtt tgctggtcgc cttcaataac tgcgcacgga acgctgtctt
     9661 tcaggcgcac tagggtttcc gtcagcaggg tggttttacc ggaaccaggg ctggaaacca
     9721 ggttgagcac cagttgcttg cgggcagcaa agcgcgcgcg gttgcgttca gccagacggt
     9781 tatttttgtc cagcacgtca atttcgactt ccagcatccg acgctggctc atgcccggcg
     9841 cgtgagtgcc cgcttcgcca tgaccgtaat gcaggtcgcc ttcttcagtc tggctggggg
     9901 taaattcagg cgctttaatg ccggtgattt tcatctgcgg gcgtgccgcc ggggcaaatg
     9961 gcgcgctacg aaacgcggaa tgagggttat gtttatcacc ctcgatatac aggttgcctt
    10021 caccgcaacc gcatgttgta cacatcgctc actcctggtc tatttctatc cgccgaatct
    10081 gtaaaccgtc gtctgccaca atctgtagca tgtcaccatg acactgtgga cagcggcgga
    10141 cgcgctgggt cagtagcgtc acatactgtt ggcatgtttc acaccagcat tcggcctctt
    10201 gttcttcgag gtgcagttta caaccttccg ccacgctgcc gcggcaaacc agatcaaaac
    10261 aaaaggcaag agagctggtt tcgacacaag aaaatgcgcc aattttgagc cagaccccag
    10321 ttacgcgttt tgcgccgtgt tttgcggcct gctgttcgat caattccagt gcccgttggc
    10381 agagggttat ttcgtgcata tcgcctccca ttaactattg tcagctacaa gcaataattg
    10441 tgccagtgtt gattatccct gcagtgaata atgtcgatga tgtcgaaatg acacgtcgac
    10501 acggcgacga aattcaccaa aatcttaaaa atcgctttaa taacaataaa ttaaagttgg
    10561 tacggaaaat gcttaaagct ggcatctctg ttaaacgggt aacctgacaa tgactatttg
    10621 ggaaataagc gagaaagccg attacatcgc acagcggcat cgtcgcctac aggaccagtg
    10681 gcacatctac tgcaattcgc tggttcaggg gatcacgtta tcgaaagcgc gcctgcatca
    10741 cgccatgagc tgcgcgccgg acaaagaact ctgtttcgtc ctttttgaac attttcgtat
    10801 ttacgtcacc ctggcggatg gctttaacag ccacaccatc gagtattacg tcgaaacaaa
    10861 agatggcgaa gacaaacagc ggattgcgca ggcgcaactg agcattgacg gcatgattga
    10921 tggcaaggtc aacatccgcg atcgcgaaca ggttctggaa cactatctcg aaaaaatcgc
    10981 tggcgtttac gacagcttat acaccgccat tgaaaacaat gtgccggtga atttaagcca
    11041 actggtaaag ggacaaagcc cggcagcatg agctgaggct ttgtccgttt tgcaggcgtt
    11101 acgcctgttt ggggatgggc gtgtcgatga gtgtcgaaaa tgacatttca tcggcatgtt
    11161 ttcgtcaaaa atgacaatca cctgaggaat gcctggtgaa tcgttttgta attgctgact
    11221 ccacgctctg tatcggctgc cacacctgtg aggccgcctg ttcagagacg catcgccagc
    11281 acggcctgca atcaatgccg cgcctgagag tgatgctcaa tgaaaaagaa tctgcgccgc
    11341 agctctgtca ccactgtgaa gatgcaccct gcgcggtggt ctgcccggtt aacgccatca
    11401 cccgcgttga tggggtcgtg cagttgaatg aaagtctgtg cgtaagctgc aaactgtgcg
    11461 gcatcgcctg ctccggcgcg tgtcagcaca ttgcttgact gggggctagg tattcgcgcg
    11521 atcgccgtca aatgtgacct ttgtagcttt gatgaacaag gtccggcctg cgtgcggatg
    11581 tgcccgacta aagccctgca tctggtggat aacaccgata tcgcccgcgt cagcaaacgt
    11641 aagcgtgagc tgacctttaa cacggacttt ggcgatctca ccttgtttca gcaggctcaa
    11701 agtggagagg ctaaatgagc gcaatttccc tgatcaatag cggcgtggag tggtttattg
    11761 ccgccgctgt tctggcattt ctcttttctt ttcaaaagac gctaagtggc tggatagccg
    11821 gaattggcgg cgcggttggt agccggtata cggcagccgc gggctttact gtgctgactg
    11881 gcgcggttgg cgtgagcggt gcgctgtcgc tggtaagcta cgatgtgcaa atcaccccgc
    11941 ttaacgcgat ttggctgatt accctcggcc tttgcggtct gtttgtcagc ctctataaca
    12001 ttgactggca tcgccacgcg caggtgaagt gcaacggctt gcagatcaat atgttgatgg
    12061 ctgccgccgt ctgcgccgtc attgccagca acctcggcat gttcgtggta atggccgaag
    12121 tcatggcctt gtgtgcggtg ttcctcacca gcaacagcaa agagggcaaa ctgtggtttg
    12181 cgctggggcg tcttggcact ctgctgctgg cgattgcttg ctggctgctg tggcagcgtt
    12241 acggcacgct ggatctgcgc ctgctggata tgcgtatgca acagctgccg ctcggttccg
    12301 atatctggct gctcggtgtg attggctttg gcctgctggc cgggattatt ccgctgcatg
    12361 gctgggtgcc gcaggcacat gctaacgcct ctgcgccaga tgccgcgttg ttttctacgg
    12421 tagtcatgaa aattggcctg ctgggcattt taaccctgtc actgctgggc ggtaatgcac
    12481 cgctgtggtg ggggatcgcg ctgctggtgc tcggcatgat caccgcgttt gtcggtggtc
    12541 tgtatgcgct gatggagcac aacatccagc gcctgctggc ttaccacacc ctggaaaata
    12601 tcggcatcat cc
//
LOCUS       DAJVTL010000120        12592 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.122, whole genome shotgun sequence.
ACCESSION   DAJVTL010000120 DAJVTL010000000
VERSION     DAJVTL010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12592
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.122"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(59..625)
                     /gene="mepS"
                     /locus_tag="OQQ26_003357"
     CDS             complement(59..625)
                     /gene="mepS"
                     /locus_tag="OQQ26_003357"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HCS1858705.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
                     SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
                     REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
                     SSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            complement(1037..1750)
                     /gene="lpxT"
                     /locus_tag="OQQ26_003358"
     CDS             complement(1037..1750)
                     /gene="lpxT"
                     /locus_tag="OQQ26_003358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kdo(2)-lipid A phosphotransferase"
                     /protein_id="HCS1858706.1"
                     /translation="MIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQ
                     KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA
                     VVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
                     MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
                     LITFFDKSLPGKNKHFQNK"
     gene            complement(1789..2775)
                     /gene="yeiR"
                     /locus_tag="OQQ26_003359"
     CDS             complement(1789..2775)
                     /gene="yeiR"
                     /locus_tag="OQQ26_003359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding GTPase YeiR"
                     /protein_id="HCS1858707.1"
                     /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
                     SEQALQRWWQQNGGDRQLIHSAHGKVDGYLLDLPRRNLAELPASAAHSHQHVVKKGLA
                     ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARFAPVERVKGVLRIPE
                     GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
     gene            complement(2893..4359)
                     /locus_tag="OQQ26_003360"
     CDS             complement(2893..4359)
                     /locus_tag="OQQ26_003360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HCS1858708.1"
                     /translation="MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT
                     DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN
                     AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS
                     APGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHV
                     SFPGTMVDRIVPAATDESLAEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVA
                     GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLDE
                     QAPTLQIKDVDLTQYAYKLIARFANPALKHKTWQIAMDGSQKLPQRMLAGIRIHLGRE
                     TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRDLVAGSSSEQRVTALLSLRE
                     VFGDDLPDNPHFVQAIEQAWQQIAQFGAHQALLNTLKI"
     gene            complement(4582..5154)
                     /gene="yeiP"
                     /locus_tag="OQQ26_003361"
     CDS             complement(4582..5154)
                     /gene="yeiP"
                     /locus_tag="OQQ26_003361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HCS1858709.1"
                     /translation="MPRANEIKKGIVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
     gene            5309..5563
                     /locus_tag="OQQ26_003362"
     CDS             5309..5563
                     /locus_tag="OQQ26_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HCS1858710.1"
                     /translation="MECRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKI
                     FTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAP"
     gene            complement(5560..6536)
                     /locus_tag="OQQ26_003363"
                     /pseudo
     CDS             complement(5560..6536)
                     /locus_tag="OQQ26_003363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416675.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            6903..8033
                     /gene="fruB"
                     /locus_tag="OQQ26_003364"
     CDS             6903..8033
                     /gene="fruB"
                     /locus_tag="OQQ26_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HCS1858711.1"
                     /translation="MFQLSVQDIHPGEKAGDKEEAIRLVAAALVQAGNVAEGYVNGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVIWGDGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
                     ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS
                     RAANAFDVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
                     SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
     gene            8033..8971
                     /gene="fruK"
                     /locus_tag="OQQ26_003365"
     CDS             8033..8971
                     /gene="fruK"
                     /locus_tag="OQQ26_003365"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HCS1858712.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFEVTPTDWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
                     HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            8988..10679
                     /gene="fruA"
                     /locus_tag="OQQ26_003366"
     CDS             8988..10679
                     /gene="fruA"
                     /locus_tag="OQQ26_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HCS1858713.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDVEMA
                     IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVDASG
                     PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
                     LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTE
                     GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
                     AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
                     TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
                     LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
                     ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
                     AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA"
     gene            11101..12042
                     /locus_tag="OQQ26_003367"
                     /pseudo
     CDS             11101..12042
                     /locus_tag="OQQ26_003367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416671.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine kinase"
     gene            12030..>12592
                     /gene="psuG"
                     /locus_tag="OQQ26_003368"
     CDS             12030..>12592
                     /gene="psuG"
                     /locus_tag="OQQ26_003368"
                     /EC_number="4.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HCS1858714.1"
                     /translation="MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQN
                     AQIAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFV
                     VAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTV
                     VCAGAKSILDLGLTTEYLETFGVPLIG"
BASE COUNT         3203 a         3031 c         3304 g         3054 t
ORIGIN      
        1 aagcagtgct ttcagttaac tcgtcaggat agccaaggga ttgcatccaa acggtttatt
       61 agctgcggct gagaacccgg cgtgcttcgt tgtaacgctt cttccagtac ggttcattca
      121 tgctggaaat aataacacca ctgctggtgg aagcatggac aaactgattg ttgccgatat
      181 aaataccgac atggcgtccc gttgaaccgg cacggaacag aactaaatca cccgtacgca
      241 aattactgcg ggaaacagat ttacccattt cctgctgttc gtaagtcgaa cgcggaagtt
      301 ctaagccaaa ttgctcacgg aatgtacgct gtacgaaacc agaacaatcg ataccttttt
      361 tagtgctgcc gcccagacga tagcgcacgc ctttccagtc agcatactga tccataattc
      421 gcgattttac gtcgacatta cgaaccaggt tttcaaattc atcctgagaa gcttgcagtg
      481 atgatgtttc actacccact gcacgtgtct caggatgcat attctttgcg gtgttatttg
      541 cactacatgc agaaagcaga accgctactg caatcgcggg aatcccgcgc aagatatatc
      601 tcaaaatcgg ttgagatttg accatgttgt ttgttttccc ttgaagtcct taacgacaaa
      661 tatcgttata aaaaaatgcc aagcgacacg agactaatta cctgggcatg ttgaaacaat
      721 tccttaaggc caaatctgtg gactaacgca caaaattata tgctgtgagg ataatctacc
      781 gccgaggcaa aacgagttcg agattacccg attgatgcgg tcttggcgag cggttttaca
      841 tgatttttta taagaaaaag tgatacagaa agttaataag cgggattggt caattaaagt
      901 acgattgagt gaaacgcatg caatccattc atttacttag agaatgattt ttgcgcgcga
      961 tggatgaaag cacggtgcgc atcatcagga ttatcctcac tataaaaata accctgatga
     1021 tgttaattac tgtgagttat ttgttttgga aatgtttgtt ttttcccggt agtgatttgt
     1081 caaaaaaggt gattaatcga tcacttaatg gcgtcagcaa cacccagggc aaaccgatca
     1141 atatcacggt catcgaaccg acaatgatgt cagtaaacca gtgtgcgcca atcattactc
     1201 tgggaaatgc aaaaaccaca aaaataataa gggcgataag gcctgcaact ttgccgaaat
     1261 aacgccacat gaatgccgaa aaaataagca gcatcatgcc gtgatcgccg ggaaagctat
     1321 ctcgtgaggc atctttcgtg ggaacagaga gcagttcgct gacgcggtta atatcggtaa
     1381 aagtcaatgt tgggctggcc cgttttacag gaattaatgc ctgacccagc tggtttaata
     1441 ccactgcagt taatagcatg accagaccaa taatcacgat acgtcgtctg cctggggcgt
     1501 tttctttcag ccagaaactc agcatcaaca ttcccatcgc cagcagagaa caaccgtcga
     1561 aagcgcgatt gttggtcaat gcaaccagcc ataaaaaggc cttactttcg accagtttct
     1621 gattaaagaa ataaaaaata tccgcatcaa tcggcaacca taatccatga ttaacgggaa
     1681 tataccagga aagaaacagc gcgaggccga caatattcaa caacactatt tgcggcaaat
     1741 ttttaatcat attttctcta attatcttac tgaaaaacgc aggcaacctt acgcggtagt
     1801 cgctaaacga agcttcaaca gcgcgctctg caaggcattc cagtcagctt cgctgctgga
     1861 aatcagctca atacggctgt ccggtggcgc aacgttttgc gtttcaatgt gcaggtcatc
     1921 gccctgacgg ttgattcgca ccagcccttc gggaatacgc agcacgcctt tgacgcgttc
     1981 caccggtgca aatcgcgccc attccagaat gccaatggtg tcgaataccg tatcagcgtc
     2041 gaatatccag ccgcaggcct gatatccttg tccactgttc agactgcgac gccagcgttg
     2101 atgctctggc agacttaacg ctgctaaccc ctttttcacg acatgctgat gagaatgcgc
     2161 ggcgctggcg ggcaactcgg ctaaattgcg acgcggcaaa tccagaagat aaccgtcaac
     2221 tttcccatgc gcgctgtgaa ttaattgccg atcgccacca ttttgctgcc accaacgctg
     2281 tagcgcttgc tcgctttcag gtgtcgcacg gtcggattta ttggcgacaa tgatgtctgc
     2341 ggcagccagc tggtcacgga agttttcatt gctggcgctt ttttcgtcca gcagcaggcg
     2401 tggatcgaga atgcacaagg tggcgcgcag atctatccac ggttcataga ctggtgcggt
     2461 taacagatcg aggatctgtt tcggatggcc cagcccagtc ggctctatca acaagcggtc
     2521 tggttttccc tgacgcagta aggtattcaa ccctacctgc atgggtaaac cattaacgca
     2581 gcacatgcag ccgccgggga tctctttcag caatgcgccg ctatcggcga gcaaagcacc
     2641 atcaattccg acttccccaa attcattaac cagtaccgcc catttttcgt tgggatcttt
     2701 atgggctaac agatgaagaa tcgacgtggt tttcccgctg ccgagaaaac cggtgatgag
     2761 gttggtcctg gtcacaacgg ctccgcaata ctctggtaag ttaactgagc gttaatcctg
     2821 gctaaaaacg gcagaaaaga gaaggggaga gcggacgaag gcgagcttca tccgctttaa
     2881 ccgcagaaat cgttaaattt tgagggtgtt taatagcgcc tgatgcgcgc cgaattgtgc
     2941 gatttgttgc caggcttgtt cgatggcctg cacaaaatgc gggttatctg gcagatcatc
     3001 accgaaaact tcacgcaggg aaagcagggc ggtgacgcgt tgctcactgc tgctgcccgc
     3061 aacaagatcg cgaattttat cgctaagcgg atcgcgaaca tcaatggcat ttccggcatc
     3121 atcaacgccg ctgacgtaac gcatccagcc tgcaacgcct aatgccagca acgaccagtc
     3181 cgtttcgcgc cccagatgta tgcgaatacc tgccagcatg cgttgcggta atttctggct
     3241 gccatccatc gcgatttgcc aggtcttatg tttcagcgcc ggattagcaa aacgtgcaat
     3301 taacttatac gcatattgtg ttaaatcgac atctttaatt tgcagtgtcg gcgcttgctc
     3361 atccagcatt aatgttctgg cggcatggcg aaatgcgcga tcctgcatgc aatcactgat
     3421 gtgggcgaat cctgagaggt aacccagata agcgagaaaa gagtggctgc cattaagcat
     3481 ccgcagtttc atctcttccc atggcaggac atcattcacc atttgtacac ctgcgacttc
     3541 ccaggcagga cgcccagcga cgaagttatc ttccaccacc cactggataa acggttcgca
     3601 gctaatcgcg cagggatcat tcacccccag atgctggctg atttctgcca gtgattcgtc
     3661 ggttgcagcc ggaacaatgc ggtcgaccat ggttcccgga aaactgacgt gttcttttat
     3721 ccacccggcg agttctggcg aacgtttttc tgccattccc agcaccgcgt ttttcaccac
     3781 atggccattg tcgggaatat tgtcgcagga gagcacggta aacggtgtaa ggccgcgctc
     3841 acggcggcgt ttcagtgctt cgacgagaat acccggtgcg gagtgaggtt cttcaggggt
     3901 ttgtagatcg tgaataatcc gcggattact ggtgtcgagt gcaccggtgg ccgggtcaat
     3961 acaatagcct ttttcggtaa tcgtcaggga aacaattgcc acctgtggct cgcaaaattt
     4021 ctcaataatt gccgctaagg aatccagttt tgcattaagg cattcgtgaa cggcaccgac
     4081 aattatcacc tgattgccgt ccgcaccttt ctccagcacg gtatataaat ggttctgtgc
     4141 gcggagctgg ctcatcagtt gatcaccgct gaacaagctg atttcacaga tcccccagtc
     4201 gccgccctgg gcattcagca cacgatcggt cagtaacgcc tgatgagcgc ggtgaaaggc
     4261 gccaaagcca aaatgaacga tacgtgattg caactgctgg cgatcgtagc gtggagcgtg
     4321 tacatgatgc gggagcgtaa cggaggcaat tgtcttcata ggagtcacgt cttagtaacg
     4381 ataaattaac aatgacagtg taaagttata tgacagcaat tgaaattggt ctggattgtt
     4441 aatgcgatga agtgtgaggg cgatcaatca acgagtgaaa attgagggcg taaggtgttc
     4501 aggaagcgca aaatagaaga ttggtataat aaattaaaaa agggacagcc tgagctatcc
     4561 cttttctgca tgcggctgaa gttagtcagc acgacccata taacggcgtt cttcgatatg
     4621 gatacgaatt ttttcgcccg ggcttaagta ttctggtacc tgaatcacca gaccagtgct
     4681 caatgtcgcc ggtttgttac gggcgctggc agatgcccct ttgatgcctg gggcggtttc
     4741 aacgatttcc agatcaacgg tctgcggcag ctcaagcgcc agcagttgac cgtcccaggt
     4801 cagcacctgc atgtccggca tgccgccctc tggcataaac agcaactctt cttcaatctg
     4861 atctttggtg aaggtatacg gggtatagtc ttctttatcc ataaagacat attcgttgcc
     4921 atcgacatag gagaagtcaa cgtaacggcg ggtcagcgtc acggtgtcaa cgatatcatc
     4981 acctttgaaa cgctcttcta ctttcagccc ggtacggaca tcagaaaaac gcattttgta
     5041 cagcgtagcg gcaccgcggg cagtgggcga ctgaatatca atatccttaa ccagcagcag
     5101 tttgccgttg taattcagta caataccttt tttaatttcg ttcgctcttg gcatcgaaaa
     5161 attcctgtag tcgaaaatgt caaaaatatc gcgacaaagt actcgcgacg ggcctttcgg
     5221 gcaagtggta ttcgcacttt tgctggtgca aaaaaggtgg tactgtgcgc gctcatcaat
     5281 ccggtggtta accttaagag aacaacgtat ggaatgccgt ccgggttgcg gggcgtgttg
     5341 cactgcccct tcaatttcca gccctattcc cggtatgcca gatggcaagc ccgccaatac
     5401 gccctgcatt cagcttgatg aacagcaacg ctgtaaaatt ttcacctcgc cactgcgacc
     5461 gaaagtctgt gcaggcttac aagccagcgc tgaaatgtgc ggtaactcgc gtcagcaggc
     5521 catgacctgg cttatcgatc tggaaatgct gaccgcgcct taaacatctt taatccgcag
     5581 taagcaaaac agagtggcga taatcatcac catcgcaaac cagaacacag cgtgataatt
     5641 ccagatctcg gcgacgatgc ccgccactga tcctgcgatg atccagccca cgcgcgaagt
     5701 gttggtatag agcgtggtgg ctgaacccgc ctgaccgggc atcagatcct gaaaatagag
     5761 catcccgatg ccgcccagaa tgccaataaa aatagcattt agcagctgca agcccaacag
     5821 aatgacaggt gaatgcgcca tcagcattcc tgcgtaaaaa cagacgccac ccacggcagc
     5881 agcgtatcgc gacggttacg gcgcggcgct tcgatcgtgc cggtcgccag cggaagctct
     5941 ttttgcatcg acggtaaaaa cagccacacc atcacaccgc aaacaataaa cgctaccgct
     6001 gcgctcagat acattaccgt aaagctgaaa cccatcgcta aggcataagc cagcggtggg
     6061 ccaatgaccc atgccagtga aacctgagcg cgtaaaaaag agctgaacat caccgcctca
     6121 cgtccggttt tgtcggcatg ttcacgggca agggcaaaca tttgcgggtt agcggtcgag
     6181 ccaaagctgc taagaaagac gccaacgaat agcaaaacaa agtagttgcg attccaggca
     6241 aaaagggtgc aggccagcac gcctaacagg cagcaaaaga caatcagcga tttgcgatcg
     6301 ccgcgcttat cagagcgccc ggcgagaaac tgacttacca gaatcccaat gacagcgctg
     6361 ccggtaaaga agaatcccac catcgccgga cgggcatgta cttcatcggt aagaaaaata
     6421 ctgagtgtcg gggtttgcag agcgcccgca ataccggtga gaaaggcaac gattaaaaac
     6481 gccgtcgagg tcaggtcaaa cgatttcgcg ctggagactg cgggggagtt atgcatgctg
     6541 gtcgatcact ggaagaggaa gacgcggagt ttacgctgct tgtcagaaaa taaacagaca
     6601 gcgaaatcaa aagcgccacg aataatcaaa atgccatttc actgttgctg attggctgct
     6661 gacgctgctg aaatgaaatt gctgataacg gattttccca tcagcaatta ggaaaaatga
     6721 caaaaaattg tgcagcacat caaacttttg ctcataactt tacggctttc cttgcgtgct
     6781 gaaacagaag tattatgctt tcttgaaacg tttcagcgcg atcttgtctt taacctaagc
     6841 caggttggcg ctttttttct catagaggct gaatcgtttc aattcagcaa gagaggagaa
     6901 ctatgttcca gttatccgta caggacatcc atccgggcga aaaggccgga gacaaagaag
     6961 aggcgattcg cctggtcgct gcggcgctgg tgcaggccgg taatgtagca gaaggctacg
     7021 tcaatggcat gctggcgcgc gaacagcaaa cctcaacgtt cctcggcaat ggtattgcta
     7081 ttccacacgg cactaccgac acccgcgatc aggtgctgaa aaccggcgtt caggtatttc
     7141 agttcccgga aggcgtcatc tggggtgacg gtcaggtagc gtacgtggca atcggtattg
     7201 ctgccagctc ggatgaacat ctgggcctgc tacgccaact gacccacgta ctgagcgatg
     7261 attccgttgc tgaacaactg aagtcagcaa caacagcaga agaacttcgc gcattgctga
     7321 tgggcgaaaa gcagagtgag cagctgaagc tcgacaacga aatgctgacg ctggatatcg
     7381 tcgccagcga tctgctgact cttcaggcgc tgaacgctgc gcgtctgaaa gaggcggggg
     7441 cagttgacgc cactttcgtc accaaagcca tcaatgaaca accgctgaat ctcggacagg
     7501 gtatctggtt gagcgatagc gccgaaggca atctgcgtag cgcgattgcg gtaagccgtg
     7561 cggcaaatgc ttttgatgtg gacggcgaaa cggcagccat gctggtgagt gtggcgatga
     7621 atgacgatca gcccattgcg gttcttaagc gtctcgctga tttgttgctc gacaataaag
     7681 ctgaccgctt gctgaaagcg gatgcggcaa cgttgctggc gctgctgacc agcgatgatg
     7741 cgccgaccga cgacgtgtta agcgcggagt ttgtggtgcg caatgaacac ggcctgcatg
     7801 ctcgtccagg taccatgctg gtcaatacca ttaaacaatt taacagtgat attaccgtga
     7861 caaaccttga tggcaccggc aaaccggcaa acggacgtag tctgatgaaa gttgtggcac
     7921 ttggcgttaa gaaaggtcat cgcctacgct ttaccgccca gggtgcagat gctgaacagg
     7981 cgctgaaagc aatcggcgac gctatcgctg ctggtcttgg ggagggcgca taatgagcag
     8041 acgtgttgct actatcaccc ttaatccggc ttatgacctt gttggtttct gcccggaaat
     8101 tgaacgcggc gaagtgaacc tggtgaaaac caccggtctg catgcggcgg gtaaaggcat
     8161 caacgtggcc aaagtattaa aagacctggg aattgatgtc accgttggcg gcttcctcgg
     8221 taaagacaat caggatggtt ttcagcaact gttcagcgag ctgggcattg ccaaccgttt
     8281 ccaggttgta caggggcgca ctcgaattaa cgttaagctg acggaaaaag acggcgaagt
     8341 gaccgacttc aacttctcgg gttttgaagt cacccccacc gactgggaac gctttgtgac
     8401 tgattctctg agctggctcg gtcagttcga tatggtctgt gtcagcggaa gcttaccgtc
     8461 aggcgtcagc ccggaagcgt tcaccgactg gatgactcgc ctgcgtagtc agtgtccttg
     8521 cattatcttt gatagtagcc gtgaagcgtt agtagcaggt ttgaaagcgg caccgtggct
     8581 ggtgaaacct aaccgccgcg agctggaaat ctgggcaggc cgtaaactgc ctgaaatgaa
     8641 agatgtgatt gaagctgcgc atgcgctgcg tgaacaaggt attgcgcatg tcgttatttc
     8701 actgggtgcc gaaggcgcgc tttgggttaa tgcctccggc gaatggatcg ccaaaccacc
     8761 gtcagtcgat gtcgtaagca ccgttggcgc aggggattct atggttggtg gcctgattta
     8821 tggcttgcta atgcgtgaat ccagtgaaca cacactgcgt ctggcgacag ctgttgcagc
     8881 cctggcggta agtcaaagca atgtgggtat taccgatcgt ccgcagttgg ccgcaatgat
     8941 ggcgcgcgtc gacttacaac cttttaactg acagcaggtg aggcataatg aaaacgctgc
     9001 tgattattga cgctaatctc ggtcaggcac gcgcctatat ggcgaagacc ctgctgggcg
     9061 cggcggcgcg aaaagcaaaa ctggaaatca tcgacaatcc gaacgacgtt gaaatggcga
     9121 ttgttctcgg tgattccatc ccgaatgaca gcgcgctgaa cggtaaaaat gtctggctgg
     9181 gcgatatttc ccgggcagtt gcgcaccctg agctgttcct gagtgaagcc aaaggccatg
     9241 cgaaacctta cactgcgccg gtcgctgcga cagcaccggt tgacgccagc ggcccgaaac
     9301 gcgtagttgc ggtgactgct tgcccgactg gcgtagcaca cacctttatg gcggctgaag
     9361 ccattgaaac cgaagcgaaa aaacgtggct ggtgggtgaa agttgaaacc cgtggttctg
     9421 ttggcgcggg taatgcaatc actcccgaag aagtagccgc agcggatctg gtgattgtgg
     9481 cggcagatat cgaagtggat ctggcgaaat ttgctggtaa accgatgtat cgtacctcta
     9541 ccggtctggc gctgaagaaa accgcgcagg aactggataa agcggttgct gaagcaacgc
     9601 cgtatgaacc ggcgggcaaa gctcaaacgg cgaccactga aggtaagaaa gagagtgcag
     9661 gcgcttatcg tcacttgcta acgggcgtct cttacatgct gccgatggtc gttgcaggtg
     9721 gtctgtgtat cgcgctttct tttgcttttg gtatcgaagc gtttaaagag ccgggtacgt
     9781 tggctgcggc gctgatgcag attggtggtg gttcagcctt tgcgctgatg gtgccggtac
     9841 tggcaggtta tattgccttt tccattgccg atcgtccggg cctcacgccg ggtctgattg
     9901 gcggtatgct ggcggtcagc accggttctg gcttcattgg tggtattatt gcgggcttcc
     9961 tggctggtta cattgcgaag ttaatcagta cgcaattgaa actgccacag agtatggagg
    10021 cgctgaaacc gatcctgatc attccgctaa tttccagtct ggtggtcggt ctggcgatga
    10081 tctacctgat cggtaaaccg gttgctggca ttctcgaagg gctgactcac tggctgcaga
    10141 ccatggggac tgcgaatgcg gttctgctgg gggcgatcct cggtggcatg atgtgtactg
    10201 acatgggcgg tccggtaaac aaagcagcgt acgcattcgg tgtgggtctg ctgagtactc
    10261 aaacctatgg cccgatggcg gcgattatgg cggcaggtat ggtgccaccg ctggcaatgg
    10321 gtctggcaac aatggtggcg cgtcgcaaat tcgacaaagc gcagcaggaa ggtggcaaag
    10381 ccgctctggt attgggactg tgcttcattt cggaaggtgc aattccgttt gctgctcgtg
    10441 atccgatgcg tgtgctgccg tgctgtatcg tgggtggggc gctgactggc gcaatctcaa
    10501 tggcgattgg tgcgaaactg atggcaccgc acggtggcct gtttgttctg ctgatccctg
    10561 gcgctattac gccggtactg ggttacctgg tagccattat tgccggtacg ctggtggcgg
    10621 gtttggccta tgccttcctg aaacgtccgg aagtggacgc agtagcgaaa gcagcgtaat
    10681 aaaaggtgtg ttacagggca gaaatttcct gtcctgtaac atttgatgag cgcaaagaga
    10741 atgaccggtt tgtgaatgta attttatgaa tttaaatggt tttatctttc agtagaaact
    10801 tgaaacgttc atcaaacact aaggttattt cctcaagggc agattatttt ctgccttttt
    10861 tattgttccc gttctgtgca tcccgtcaca aattcctcgc ttttgtaatt caggcattta
    10921 atcgcatttt gtgagcctgc tcaaatctgc ccattttgcc tctctggcgg taatttactt
    10981 tacgtaaaac atgcatacta tgagcacatg tttaaatatg aacacatgtt taaaccgtct
    11041 tgcagtatct atattcttgt ggattgacag ggttggtaat tttttaccag aggacgtgct
    11101 atgcgcgaaa aggattatgt cgtaattata ggttcggcga atattgatgt cgccggatat
    11161 tcacatgaat cattaaatta tgcggattca aatccaggta aaataaaatt tacgcctggt
    11221 ggagtagggc gcaatattgc acaaaacctg gcgttgctgg gtaacaaagc ctggctactg
    11281 agcgccgtag gcagtgattt ttatggtcaa tcgctgctaa cgcaaaccaa tcaatctggc
    11341 gtttatgtcg ataaatgcct gattgtgccg ggagaaaata cgtctagtta tttatcatta
    11401 ctcgataata ccggtgaaat gctggttgct ataaatgaca tgaatattag caacgctatt
    11461 acagctgaat atctcgcaca gcaccgtgaa tttatttaga gggcaaaggt cattgtcgcg
    11521 gactgtaata tcagtgaaga ggcacttgca tggattctgg ataatgccgc caacgtacct
    11581 gtatttgtcg atccggtttc agcgtggaaa tgtgtcaaag tgcgcgaccg tctaaatcag
    11641 atccacactc tgaagccaaa ccgccttgaa gcggaaaccc tgagtgggat tgcgctgtca
    11701 gggcgtgacg atgtggcaaa agttgctgcc tggttccatc aacatggcct gaaccgactg
    11761 gtattgagca tgggcggcga tggcgtttat tacagtgata tcagcggtga aagtggctgg
    11821 tctgccccga tcaaaaccaa tgttattaat gttaccggag cgggcgatgc catgatggcg
    11881 ggacttgctt cgtgttgggt agacggaatg ccgtttgccg aatctgttcg tttcgcacag
    11941 ggatgttcgt caatggcgct ctcctgtgaa tacaccaata accccgattt atcgattgcc
    12001 aacgttatat cgttagtgga gaacgcagaa tgtctgaatt aaaaatttcc cctgaattat
    12061 tacaaatttc cccggaagtg caggacgctt taaaaaacaa aaaaccggtt gtggcgctgg
    12121 aatcgaccat tatttctcac gggatgccgt tcccacaaaa tgcccagatc gcaattgaag
    12181 tagaagaaac tattcgtaaa cagggcgcag tacctgctac tatcgccatt attggcggcg
    12241 tgatgaaagt gggtttaagc aaagaagaaa ttgaattact gggtcgtgaa gggcataacg
    12301 tgaccaaagt tagtcgtcgc gatttacctt ttgttgttgc tgccggaaaa aatggcgcaa
    12361 ccactgtggc ttcaacgatg attattgcgg cgcttgccgg aattaaagta tttgccaccg
    12421 ggggaattgg tggtgttcat cgcggggcgg aacatacctt cgatatttct gccgatttgc
    12481 aagaactggc aaatactaat gtcaccgttg tttgtgccgg ggcgaaatct attctcgatt
    12541 taggattaac cactgagtat ttagaaacct tcggtgtgcc gttaattggc ta
//
LOCUS       DAJVTL010000121        12503 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.123, whole genome shotgun sequence.
ACCESSION   DAJVTL010000121 DAJVTL010000000
VERSION     DAJVTL010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12503
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.123"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..719
                     /locus_tag="OQQ26_003369"
     CDS             <1..719
                     /locus_tag="OQQ26_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001689732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1858715.1"
                     /translation="TQRKIVDGLSDGLIDGLKMLAVAVTAQKAANVAGGLLNLANAVT
                     SFGDAVNKAKAGKAGSSGGALNKVGRVVLYAELVNFALDNLNPEAAKNPNLHQSGIGT
                     ETNFNPEYKGDAAKPNQINEGWAKIGSSIADWFNGAANKIAGFQEPMNNFVNNTQSTP
                     PAITGDIVNSNAQLAMAVSELGRKVDALTAEAKKPLSVNITGEATVKPDETSFMTFSS
                     NIYDQYAEATLLSSSFPEDD"
     gene            877..1647
                     /locus_tag="OQQ26_003370"
     CDS             877..1647
                     /locus_tag="OQQ26_003370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000640586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858716.1"
                     /translation="MIYSNQLRYTGKDGVYFHLRDNVDAFLTLSATENMEFDSPMQVT
                     TQNMQSGQTVTDNVQRAPRTITISGVVVVGYEGSLLLTRQGQLVENFIDTLENWRDQK
                     QIISVICRDGIKIDDSIITSFKASKDVGISNGLRIQLTFQEINFKAIVGQTDVSAATG
                     RTSTTNDGGATSKKNTGNTTTSLGSPMLTCKELFSYSASELSDEALKARVTCSKSVSV
                     KNGESTFTASANEQASKVLKSGNALRKFSVNPNKKGTY"
     gene            complement(1799..2584)
                     /gene="lafU"
                     /locus_tag="OQQ26_003371"
     CDS             complement(1799..2584)
                     /gene="lafU"
                     /locus_tag="OQQ26_003371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lateral flagellar export/assembly
                     protein LafU"
                     /protein_id="HCS1858717.1"
                     /translation="MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSH
                     PPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEME
                     IVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMA
                     YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRI
                     EIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR"
     gene            2556..4268
                     /locus_tag="OQQ26_003372"
                     /pseudo
     CDS             2556..4268
                     /locus_tag="OQQ26_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140833.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
     gene            complement(4322..5095)
                     /locus_tag="OQQ26_003373"
     CDS             complement(4322..5095)
                     /locus_tag="OQQ26_003373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308281.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HCS1858718.1"
                     /translation="MHDQPLLNMSLPSIPSFVLSGLLLLCLPFSSFASATTSHISFSY
                     AARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQVKQHPEWFPAPLK
                     ASNRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVF
                     YAYNKILEAKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDG
                     QFIESPRTGETIRVSRLAEPFWQDHFLGARRILTEETIL"
     gene            5281..5541
                     /gene="dinJ"
                     /locus_tag="OQQ26_003374"
     CDS             5281..5541
                     /gene="dinJ"
                     /locus_tag="OQQ26_003374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin DinJ"
                     /protein_id="HCS1858719.1"
                     /translation="MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVARE
                     KALPFDLREPNQLTIQSIKNSEAGVDVHKAKDADDLFDKLGI"
     gene            5544..5822
                     /gene="yafQ"
                     /locus_tag="OQQ26_003375"
     CDS             5544..5822
                     /gene="yafQ"
                     /locus_tag="OQQ26_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YafQ"
                     /protein_id="HCS1858720.1"
                     /translation="MIQRDIEYSGQFSKDVKLAQKRHKDMNKLKYLMTLLINHTLPLP
                     AVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG"
     gene            5978..6718
                     /locus_tag="OQQ26_003376"
     CDS             5978..6718
                     /locus_tag="OQQ26_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HCS1858721.1"
                     /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
                     LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
                     ALVFGQSSVQVSIYPFRMTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN
                     GRYVVSKPLSHEVVQPQLASNYTLPEAK"
     gene            complement(6689..7456)
                     /locus_tag="OQQ26_003377"
     CDS             complement(6689..7456)
                     /locus_tag="OQQ26_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HCS1858722.1"
                     /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
                     SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMLGEWRLFCLGERVV"
     gene            complement(7662..8240)
                     /gene="lpcA"
                     /locus_tag="OQQ26_003378"
     CDS             complement(7662..8240)
                     /gene="lpcA"
                     /locus_tag="OQQ26_003378"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HCS1858723.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
                     RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            8480..10924
                     /gene="fadE"
                     /locus_tag="OQQ26_003379"
     CDS             8480..10924
                     /gene="fadE"
                     /locus_tag="OQQ26_003379"
                     /EC_number="1.3.8.7"
                     /EC_number="1.3.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase FadE"
                     /protein_id="HCS1858724.1"
                     /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS
                     AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     GHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGT
                     DEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWN
                     KRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVP
                     FQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALA
                     TGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAI
                     VKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMI
                     FGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSST
                     PTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLTSAV
                     LKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRH
                     YLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQ
                     RICKELGKNLPFTRLDELAHNALTKGLIDKDEAAILVKAEESRLRSINVDDFDPEELA
                     TKPVKLPEKVRKVEAA"
     gene            complement(10967..11413)
                     /gene="ivy"
                     /locus_tag="OQQ26_003380"
     CDS             complement(10967..11413)
                     /gene="ivy"
                     /locus_tag="OQQ26_003380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ivy family C-type lysozyme inhibitor"
                     /protein_id="HCS1858725.1"
                     /translation="MFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQG
                     HKLPAWVMKGGTYTPAQAVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFS
                     TIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
     gene            11594..12364
                     /gene="yafV"
                     /locus_tag="OQQ26_003381"
     CDS             11594..12364
                     /gene="yafV"
                     /locus_tag="OQQ26_003381"
                     /EC_number="3.5.1.111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutaramate amidase"
                     /protein_id="HCS1858726.1"
                     /translation="MPGLKITLLQQPLVWIDGPANLRHFDRQLEGITGRDVIVLPEMF
                     TSGFAMEAAASSLAQDDVVNWMIAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
                     HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAI
                     YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
                     TADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR"
BASE COUNT         3080 a         3105 c         3242 g         3076 t
ORIGIN      
        1 acactcagag gaaaattgtt gatggtttat ctgatggatt aattgatggt ttgaagatgc
       61 ttgctgtagc tgttaccgct caaaaggctg caaatgtagc aggaggcttg ttaaaccttg
      121 caaatgctgt tacttcattc ggtgacgctg ttaataaagc taaagctggc aaggctggtt
      181 cttctggtgg tgcgctaaat aaagtcggta gagttgtcct ttatgctgag ttggtaaact
      241 ttgctcttga taatttaaac cctgaagcag ctaagaatcc gaacttacat caatcaggta
      301 ttggcacaga aacaaacttc aaccctgaat acaaaggtga tgcagctaaa ccaaaccaaa
      361 ttaatgaggg gtgggctaag attggtagtt ctatcgctga ctggtttaat ggtgcagcta
      421 ataaaattgc tggtttccaa gaaccgatga ataacttcgt aaataacaca caatcaactc
      481 caccagctat cacaggtgat attgtgaata gcaatgctca attagctatg gctgtatcag
      541 agttaggaag aaaggtagac gctttaacag cagaagccaa gaagccttta tcagttaata
      601 tcactggtga agcaactgtt aaaccggatg aaaccagctt tatgaccttt agcagtaata
      661 tctacgacca atatgcagaa gctacgctat taagttcatc attcccagaa gatgattaat
      721 aatagtcgaa tgctacgtga ataaagcaaa gttaataccc acaccaaaaa ttatttttca
      781 cgtagctcac gcttaacaga gaaaacactt atatatcaaa ggcttggtta aaaatgatta
      841 aaatacacca agtctttgaa atcaaaggag aatttaatga tttactctaa tcagcttcgt
      901 tacactggta aagatggcgt ttacttccac ttaagagata atgtagatgc cttcttaact
      961 ttatcagcaa ctgaaaacat ggaatttgac agccctatgc aggtaactac acagaatatg
     1021 caatcagggc aaaccgttac agataatgtg caaagagcac ccagaacaat cactattagt
     1081 ggtgtcgttg tagttggcta tgaaggaagc ttattattaa ctcgtcaggg tcaattagta
     1141 gaaaacttca tagacactct tgaaaactgg cgtgaccaga aacaaattat ttcggtcatc
     1201 tgtcgagatg gtattaaaat tgatgattcc attattacaa gctttaaagc ctctaaagat
     1261 gttggaattt caaacggact aagaatccag ctaacttttc aggaaattaa ctttaaagct
     1321 attgtagggc aaactgatgt ttcagcagcc actggacgga cttctaccac gaatgatggc
     1381 ggtgctactt ctaagaagaa tacaggtaac actacaacga gtcttggaag ccctatgctg
     1441 acctgtaaag agctttttag ctattcggca agtgagttat cagatgaagc gctaaaagcc
     1501 cgtgtaacgt gctctaagag cgttagcgtt aaaaatggtg agagcacctt cacagcctca
     1561 gctaatgagc aagcttcaaa ggtgcttaag tcgggtaatg ctttacggaa gttttctgtg
     1621 aatcctaaca agaagggtac ttattgattt tgcttttgtg tgtataatct ctttgtatgt
     1681 ataaatatac agggtgtata agaaagtgaa gattatgatt ttacgcattg ctcacctctc
     1741 aacactggta aagtatacag tgatttcagg gtttgagaaa tgcgtaaaga ttcagcattt
     1801 agcgcgttcg ctgcgaaagc acctgctgct tatccagctt ttgcaccagc ggctgcacca
     1861 ctttatcccc atgctgacca aagtattgat acagcgtatc ggacgcactt ttggtcagca
     1921 ccataatctc aatgcgccgg ttgcccgcgc tttgcggatt tttggcatcc agcagcatct
     1981 ggtcagccat tgcgcttacc tgcatcactt tatcttccgg cattccggcc tcttccagca
     2041 cccgacgagc tgaaagcgcg cgatcgcccg aaaggttcca gttgttgtag atattgtttt
     2101 tgtaggccat cgcatcggta tgcccggtaa taataatttt gttatcgagc gagtcgaaca
     2161 ctggcgcgag ctccaccagc agcgttttaa agaacggcat aatctgcgcg ctgccgcgtt
     2221 cgaacatatt gcgattctgg tcgtctttaa tcagcacgcg taatccctgc gggacaatct
     2281 ccatctccag attcgcttcc atatgcgcat cacgggcaat ggtgttgata ctggttgcca
     2341 actcgccaag ctcggtggcg gatttcttct tcagcagcgc cgttttctca ttcacatcac
     2401 gcgctttttt ctccgtctct tccggcaccg ccacggtggc aggttttggc ggatgagacg
     2461 ggctgatttt atttaacggc gacagcccac caccgttaaa aatcgactgc ccgtgcagcg
     2521 cggcgataat gctttcacgc tcggatttac tgacgctgtt gacaatcaac tttattgtcg
     2581 tcaccaaagg ggccgagcgt atttccgagg tttctgcccg ctttaccctg gacgcgatgc
     2641 ccggcaaaca gatggcgatt gacgccgatc ttaacgccgg gttgatcaac taggcgcagg
     2701 cgcaaacccg gcgtaaagat gttgccagcg aggccgattt ctacggtgcg atggacgggg
     2761 catcgaagtt tgtgcgcggg gacgccatcg ccgggatgat gattctggcg atcaacctga
     2821 taggcggcgt ctgtatcggc atctttaaat acaacctgag cgccgacgct gccttccagc
     2881 aatatgtgct gatgaccatc ggtgacgggc tggtagcgca gatcccttct ctgctgctct
     2941 ccacagcggc ggcgattatc gtcacccgcg tcagcgacaa cggcgatatc gcccatgacg
     3001 tgcgcaacca gttgctggca agcccgacgg tactctacac cgccaccggg atcatgttcg
     3061 tgctggcggt ggtgccgggg atgccgctcc tgccgttttt gctgttcagc gccctgctgg
     3121 gctttaccgg ctggcggatg agcaagcaac cgcaggcggc ggaggcggaa gagaaaagtc
     3181 tcgaaacact gacccgaacc atcaccgaaa ccagcgagca acaggtcagt tgggaaacca
     3241 ttccgctgat cgagcccatc agtttaagcc ttggctacaa gctggtggcg ctggtggata
     3301 aagcccaggg caacccgctc acccagcgaa ttcgcggcgt gcggcaggtg atttccgacg
     3361 gcaacggcgt gctgctgccg gagatccgca ttcgggaaaa cttccgcctc aagcccagcc
     3421 agtacgctat tttcatcaac ggcattaagg ctgatgaagc ggatattccg gcggataaac
     3481 tgatggcgct gccctccagc gaaacctacg gcgagattga cggcgtgctg gggaacgacc
     3541 cggcgtacgg gataccggtc acctggatcc agcctgcgca gaaagcgaag gctctgaata
     3601 tggggtatca ggtgatcgac agcgccagtg tgattgccac ccatgtgaac aagattgtgc
     3661 gcagctatat tcctgatttg tttaactatg atgacatcac gcagttgcat aaccgtttgt
     3721 cgtcgatggc accgcgcctg gcggaggatt taagcgcggc gctcaattac agccaattgc
     3781 tgaaagtgta ccgggcgctg ctgaccgaag gcgtttccct gcgcgatatc gtcaccatcg
     3841 ccaccgtgct ggtcgccagt agcacggtga ctaaagatca tattctgctg gcggccgatg
     3901 tgcgcctggc gctgcggcgc agcattactc atccgttcgt tcgcaagcag gagctgacgg
     3961 tgtatacgct gaataatgag ctggaaaatc tgctgaccaa cgtagtgaat caggcgcaac
     4021 aggccggcaa agtgatgctc gacagcgtgc cggttgaccc gaatatgctc aaccagttcc
     4081 agagcacgat gccacaggtg aaagagcaga tgaaagcggc ggggaaagat ccggtgctgc
     4141 tggtgccgcc gcagctacgc cctttgctgg cgcgttatgc aaggttgttt gcgccggggc
     4201 tgcatgtgct gtcgtataac gaagtgccgg atgagctgga gttgaagatt atgggggcgt
     4261 tgatgtaaga atccggcatc ggtgcacaat tgccggatgc ggcgtaaacg ccttatccgt
     4321 cctacaaaat cgtctcttcc gtcaaaatcc tgcgcgcgcc taaaaaatgg tcctgccaga
     4381 aaggttcagc taaccgactt acccgaatgg tttccccagt gcgcggcgac tcgataaact
     4441 gaccgtctcc cagatacacg cccatatggt cggctatctc gcggctgtgg atatggaaaa
     4501 acagcaaatc tccccggcgc aggtcgttgt tcgccacaat cgttgcccga tggtagtgat
     4561 acatctcatt ggccgtgcgc gggagcttcg cctcaaggat cttgttgtag gcataaaaaa
     4621 ccaacccgct acagtcgaag ccttgatcgg gccgcgtgcc gccccagaca taaggcttgc
     4681 caagctgctg ctccaggcgg tgaatcgcca cttcggtgat gttatgcagg tgatcgctgc
     4741 ttaaaaagtg gttgttttcc gccagcgcct gccagcgtct gttactcgcc ttgagcggcg
     4801 caggaaacca ttctggatgc tgttttacct gctcccggtt gtgctggcgt agcgcccttc
     4861 tgctttcggc attgccttcc acaatatagc tggcctgctt tttcagatga gtttggtact
     4921 gttttaataa acgcgcacgg ttttgcatcc gctggcgggc ggcgtagctg aaagagatat
     4981 gtgatgtggt ggcgctggca aatgaagaaa acggcaagca aagcaacagt aatcccgaca
     5041 acacaaaaga gggaatcgac ggcaaggaca tattcaataa tggctggtca tgcattgatg
     5101 ttacagtgta tcccggcccg tacctgaaca aacttaataa aacattatta taaaattaat
     5161 aaatatattt cagttaatta tgtaaaaaca tccgtttatt aaattactca tagattgccg
     5221 ctgttgctca tttgagctac aattcaagct gaataaatat acagtacagg agatacccca
     5281 atggctgcta acgcgtttgt tcgcgcccga atcgatgaag atctgaagaa tcaggcggcg
     5341 gacgtactgg ccgggatggg gctgaccatc tctgacctgg ttcgcataac cctcacaaag
     5401 gtcgcgcgtg aaaaggcatt gccgtttgat ttacgcgagc ctaatcaatt aaccattcaa
     5461 tcaatcaaaa acagcgaagc tggcgttgat gttcataagg ccaaagacgc cgatgattta
     5521 tttgataaat taggaattta aatatgattc aaagggatat tgaatactcg ggacaatttt
     5581 caaaggatgt aaaacttgca caaaagcgtc ataaagatat gaataaattg aaatatctta
     5641 tgacgcttct tatcaatcat actttaccgc ttccagctgt ttataaagac cacccgctgc
     5701 aaggttcatg gaaaggttat cgcgatgctc atgtcgaacc ggactggatc ctgatttaca
     5761 aacttaccga taaactttta cgatttgaga gaactggaac tcacgcggcg ctctttgggt
     5821 aaagcccgct tccgatgaaa tttgtaaacc ctgcgccgac aggcttgcgt aaaactcttt
     5881 tggtgataat gtgagccttc caaatccaga ctattccgat ttgggatcca ttttgccgtc
     5941 ctggcgtgtg taaccgcttt atcaaggaat aagcagtatg cgtaaaatcg cattaattct
     6001 tgcgatgttg ttgatcccgt gcgtttcatt tgccggtttg ctgggcagca gtagctcgac
     6061 cacgccagtg agcaaagagt ataagcagca gttgatggga tcccctgtct acatccagat
     6121 cttcaaggaa gaacgtacgc tcgatcttta cgtcaaaatg ggcgagcaat atcaactgct
     6181 cgacagctat aaaatctgta aatattccgg cggcttaggg ccaaaacagc gtcagggcga
     6241 tttcaaaagc ccggaagggt tttatagcgt ccagcgtaat cagttaaaac cagacagccg
     6301 ttactacaaa gcgattaata ttggtttccc caatgcctat gaccgtgcgc atggttatga
     6361 agggaaatac ctgatgatcc acggcgattg tgtttccatc ggctgctacg cgatgaccaa
     6421 tcagggtatt gatgagatct tccagttcgt tactggtgcg ctggtgtttg gtcagtcaag
     6481 tgtgcaggtg agtatttacc cgttccgcat gaccgacgcc aacatgcagc gccataaata
     6541 ttccaacttt aaggacttct gggagcagtt gaagccaggc tacgactact ttgagcaaac
     6601 ccgtaagcca ccgaccgttt ctgtggtcaa tggtcgttac gtggtcagca agccgttaag
     6661 ccacgaagtt gtgcagccac aactggcatc aaactacacg ctccccgagg caaaataagc
     6721 gccattcgcc tagcataatc ttttgccagg tttcattgcc cgtcagcggc tgtgtcgcaa
     6781 tcaccgtgac cacatcattc ggtgtagtct gcgagctgaa gtcaatttcc acatcctgat
     6841 ccagcaacgt tgccacgcca aacggcgcgc ggcgggtgat ccagtgtaaa ttagtcgagc
     6901 aatacgccat cacatagcgc ccgtccgaaa gcagcatgtt gaaaacgccc ttctgccgca
     6961 gttcgtccgc cagtgaagcg atatatttaa acactgctgc catgttgccc ggcgtgcgcg
     7021 ggtaacgctg cgttaattta tgcagcagcc agcagaaggc tttttcgctg tcggtttcgc
     7081 ctaccgggcg gaagttgccg gtttccagtg atttgtagcc cgtcagttgt ccgttatggg
     7141 cataagtcca gttacgcccc cataactcgc gggtaaatgg gtgagtattt tccagcgcca
     7201 cctcgccccg attagcctgg cgaatatgag ccaccaccga acaggatttt atcgggtagt
     7261 cctggacaag tttggcgatg ggggaattaa agctgggttg tggatcttta aatgtgcgac
     7321 agcctttacc ttcgtaaaag gtaatgcccc agccatcttt atgtggcccg gttccaccac
     7381 cacgctgtac aagtccggtg aaactaaagc agatatcggt agggacgttg gcgctcatcc
     7441 cgagcaattc gcacatgggt aacctccaca acagcgggag cgcatggccc ccggcgaaga
     7501 ttgatttaag aattttcagg tcggatgcgg cgtaaacgca ttattcggcc tacggttcgg
     7561 gtacagattt gtaggcatga taagacgcgt cagcgtcgca tcaggcatca gcgcacaagt
     7621 gccggatgcg gcgtaaacgc cttattcggc ctacgccaga cttacttaac catctctttt
     7681 tcaatcaact ggatcaggat atggatcact ttaatgtgga tctcctgaat gcggtcggca
     7741 taaccaaagt gcggaacgcg aatttcgata tccgccgtgc cagccatttt gccgccgtct
     7801 ttaccggtca gggtgatcac tttcatcccc ttctcacgcg ccgccgcgat cgctttgatc
     7861 acgttcgcag agttaccgga agtggagatc cccagcagta catcgccttc gcgacctacc
     7921 gcttcaacgt aacgggagaa aatatcattg aaaccgaaat cattaccgac gcatgaaata
     7981 tgactaacgt cagaaatagc aatcgccggg tagcccggac ggttttcacg gtagcgaccg
     8041 gtcaactctt cagcaaagtg catagcgtcg caatgggaac cgccgttgcc gcaggaaagc
     8101 actttgccac cggctttaaa gctgtctgct aacaggaccg ccgcgcgctg aatggcgtga
     8161 atattggcgt catcttttaa aaagttagcc agcgtttccg ccgcctcgtt cagttcgtta
     8221 cgaataagat cctggtacat gaggatatcc ttcagcataa atgtaataga caaaatgcag
     8281 tgtaccggat accgccaaaa gcgagaagta cgggcaggtg ctatgacctg gactttttga
     8341 cctgaagtgc ggataaaaac agcaacaatg tgagctttgt tgtaattata ttgtaaacac
     8401 attgctaaat atttttacat ccactacaac cataccatca caagtggtca gacctcctac
     8461 aagtaagggg cttttcgtta tgatgatttt gagtattctc gctacggttg tcctgctcgg
     8521 cgcgttgttc tatcaccgcg tgagcttatt tatcagcagt ctgattttac tcgcctggac
     8581 agccgccctc ggcgttgctg gtctgtggtc ggcatgggta ctggtgcctc tggccattat
     8641 cctcgtgcca tttaactttg cgcctatgcg taagtcgatg atttccgcgc cggtatttcg
     8701 cggtttccgt aaagtgatgc cgccgatgtc gcgcactgag aaagaagcga ttgatgcggg
     8761 caccacctgg tgggagggcg acttgttcca gggcaagccg gactggaaaa agctgcataa
     8821 ctatccgcag ccgcgcctga cggctgaaga gcaagcgttt ctcgacggcc cggtagaaga
     8881 agcctgccgg atggcgaatg atttccagat tactcatgag ctggctgatt tgccgccgga
     8941 gttgtgggcg taccttaaag ggcatcgttt cttcgcgatg atcatcaaaa aagagtacgg
     9001 cggactggag ttctcggctt atgcccagtc tcgcgtgctg caaaaactct ccggcgtgag
     9061 cgggatcctg gcgattaccg tcggcgtgcc gaactcatta ggcccgggcg agctactgca
     9121 acattacggc actgacgagc agaaagatca ctatctgccg cgtctggcgc gtggtcagga
     9181 gatcccctgc tttgcactga ccagcccgga agcgggttcc gatgcgggcg cgattccgga
     9241 caccgggatt gtctgcatgg gcgaatggca gggccagcag gtgctgggga tgcgtctgac
     9301 ctggaacaaa cgctacatta cgctggcacc gattgcgacc gtgcttgggc tggcgtttaa
     9361 actctccgac ccggaaaaat tactcggcgg tgcagaagat ttaggcatta cctgtgcgct
     9421 gatcccaacc accacgccgg gcgtggaaat tggtcgtcgc cacttcccgc tgaacgtacc
     9481 gttccagaac ggaccgacgc gcggtaaaga tgtcttcgtg ccgatcgatt acatcatcgg
     9541 cgggccgaaa atggccgggc aaggctggcg gatgctggtg gagtgcctct cggtaggccg
     9601 cggcatcacc ctgccttcca actcaaccgg cggcgtgaaa tcggtagcgc tggcaaccgg
     9661 cgcgtatgct cacattcgcc gtcagttcaa aatctctatc ggtaagatgg aagggattga
     9721 agagccgctg gcgcgtattg ccggtaatgc ctacgtgatg gatgctgcgg catcgctgat
     9781 tacctacggc attatgctcg gcgaaaaacc tgccgtgctg tcggctatcg ttaagtatca
     9841 ctgtacccac cgcgggcagc agtcgattat tgatgcgatg gatatcactg gtggcaaagg
     9901 cattatgctc gggcaaagca acttcctggc gcgtgcttac cagggcgcac cgattgccat
     9961 caccgttgaa ggggccaaca ttctgacccg cagcatgatg atcttcggcc agggggcgat
    10021 tcgttgccat ccgtacgtgc tggaagagat ggaagcagcg aagaacaatg acgttaacgc
    10081 gttcgataaa ctgttgttca aacatatcgg tcacgtcggt agcaacaaag ttcgcagctt
    10141 ctggctgggc ctgacgcgcg gtttaaccag cagcacgcca accggcgatg ccactaaacg
    10201 ctactatcaa cacctgaacc gcctgagtgc taacctcgcc ctgctttctg atgtctcgat
    10261 ggcggtgctg ggcggtagcc tgaaacgtcg cgagcgcatc tcggcccgtc tgggggatat
    10321 tttaagccag ctctacctca cctctgccgt gctgaagcgt tatgacgacg aaggccgtaa
    10381 tgaagccgac ctgccgctgg tgcactgggg cgtacaagat gcgctgtatc aggctgaaca
    10441 ggcgatggat gatttactgc aaaacttccc gaaccgcgtg gttgccgggc tgctgaatgt
    10501 ggtgatcttc ccgaccggac gtcattatct ggcaccttct gacaagctgg atcataaggt
    10561 ggcgaagatt ttacaagtgc cgaacgctac ccgttcacgt attgggcgcg gtcagtacct
    10621 gacgccgagc gagcataacc cggttggttt actggaagag gcgctggtgg atgtgattgc
    10681 cgccgacccg attcatcagc ggatctgtaa agagctgggt aaaaatctgc catttacccg
    10741 tctggatgaa ctggcgcaca acgcgctgac gaaggggctg attgataaag atgaagccgc
    10801 tattctggtg aaagctgaag aaagccgtct gcgcagtatt aacgttgatg actttgatcc
    10861 ggaagagctg gcgacgaagc cggtaaagtt gccggagaaa gtgcggaaag ttgaagccgc
    10921 gtaattgaat aacggagccg aaaggctccg tttctttatc cgctaattat ttaaaattaa
    10981 agccatccgg atggttttcc aggctgccgg tcaacgccgc gaacagcacc gttttaccat
    11041 caatcgaaag cgcatcgttc acattcagcc aggtgagttt ctcttgcgac gttttctcat
    11101 caatagtcga gaacagcccc gtcatctgat tagatttctc ggaccacatc acagcgatac
    11161 gttgcgagcc acagtcatgc ggtttgcacg cgctcatcac ctgatacgtc tcatctccca
    11221 acgttacggc ttgtgcggga gtataagtac cgcctttcat cacccaagca ggcagcttat
    11281 gcccttgtac catctgatta aatgcagctt tggtggtttc gccctttgca aggctgctaa
    11341 tggttaaatc atcctgcgcc attgcactgg tggcgatgac cagagcggcg actgtcgtta
    11401 ttgccttaaa catcattcct cccgagctta tcctgcccat gttattaacc tcctaaagcc
    11461 tggcgataac acgataattt gcaaatcaga tatttccaat atcagcattt gttatcaatt
    11521 tattctgcgc taaggcaact gcctgataag gtgttaaagt tataaaaccc ttcgcataaa
    11581 ggagttgtac accgtgcctg gtttgaagat tacgcttttg cagcaaccac tggtgtggat
    11641 tgatggccct gccaacctgc gtcattttga tcgtcaactg gaaggtatta ccgggcgcga
    11701 tgtgatcgtt ctaccggaga tgtttaccag cggctttgcc atggaagcgg ctgcttcgtc
    11761 gctagcacaa gatgacgtag tgaactggat gatagccaaa gcgcagcagt gcaatgcgct
    11821 gattgcaggc agtgttgcat tacaaacgga gtctggttcg gttaaccgct ttttgctggt
    11881 tgagccgggc ggcacggtac atttttatga taagcgtcat ctgttccgca tggcagatga
    11941 gcatctacat tataaagcgg gcaatgcgcg agtgattgtg gaatggcgcg gctggcgtat
    12001 tttgccgctg gtgtgctacg acctgcgctt tccagtgtgg tcgcgcaatc tcaatgatta
    12061 tgacctcgcc atctacgtcg ccaactggcc tgccccacgc tctctgcact ggcaggcatt
    12121 gctaacggcc cgcgcgattg agaatcaggc gtatgtggcg ggatgcaatc gcgtcggcag
    12181 cgatggcaac ggctgccatt atcgcggtga cagccgggtg attaatccac aaggcgagat
    12241 tatcgctact gctgacgcgc atcaggcaac gcgcattgat gcggagctgt cgatgatggc
    12301 attgcgggaa tatagagaaa agtttccggc atggcaggat gctgatgagt ttaggttgcg
    12361 gtgagtgggg gctgtattta gggcggggaa tcagggcaag attacgaaag cccgctcccc
    12421 gcaaggactg acgccagata gtttctgtcc atggctgctt ttcgcatctt acgtcttaac
    12481 cctgccttga atattttatc ctt
//
LOCUS       DAJVTL010000122        12497 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.124, whole genome shotgun sequence.
ACCESSION   DAJVTL010000122 DAJVTL010000000
VERSION     DAJVTL010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12497
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.124"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(34..576)
                     /locus_tag="OQQ26_003382"
     CDS             complement(34..576)
                     /locus_tag="OQQ26_003382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1858727.1"
                     /translation="MKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACT
                     LVAATKDSVVTLPNVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADG
                     VQPTAFANQATTDAATNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVDYIA
                     TGKATSGNVNAVTNFHINYY"
     gene            932..1507
                     /gene="ssuE"
                     /locus_tag="OQQ26_003383"
     CDS             932..1507
                     /gene="ssuE"
                     /locus_tag="OQQ26_003383"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HCS1858728.1"
                     /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAP
                     EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
                     LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHKPQFTPNLQTR
                     LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
     gene            1500..2459
                     /gene="ssuA"
                     /locus_tag="OQQ26_003384"
     CDS             1500..2459
                     /gene="ssuA"
                     /locus_tag="OQQ26_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein SsuA"
                     /protein_id="HCS1858729.1"
                     /translation="MRNIIKLALAGMLSVSTLAAAAESSPEALRVGYQKSNISSVLAK
                     NNQMLEKRYPQTKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG
                     VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
                     TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY
                     AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP
                     VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
     gene            2456..3346
                     /locus_tag="OQQ26_003385"
     CDS             2456..3346
                     /locus_tag="OQQ26_003385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HCS1858730.1"
                     /translation="MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGY
                     TGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGR
                     ALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLLGESVDFNGKHIHVRGA
                     KLLFPPIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAY
                     GRKIRFGIRLHVIVRETNDEAWQAAERLISHLEEAYRVGELLFPHLDVAIPEIPQPQP
                     LNPQGEAVANDFIPRKVAQS"
     gene            3358..4149
                     /gene="ssuC"
                     /locus_tag="OQQ26_003386"
     CDS             3358..4149
                     /gene="ssuC"
                     /locus_tag="OQQ26_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter permease
                     SsuC"
                     /protein_id="HCS1858731.1"
                     /translation="MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEG
                     VVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQ
                     MLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARS
                     YGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREF
                     LQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV"
     gene            4146..4913
                     /gene="ssuB"
                     /locus_tag="OQQ26_003387"
     CDS             4146..4913
                     /gene="ssuB"
                     /locus_tag="OQQ26_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonates ABC transporter ATP-binding
                     protein"
                     /protein_id="HCS1858732.1"
                     /translation="MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVG
                     RSGGGKSTLLRLLAGLETPTAGDVLAGTTPLTEIQDDTRMMFQDARLLPWKSVIDNVG
                     LGLKGQWRDAARRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL
                     GALDALTRLEMQDLIVSLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD
                     IPRPRRLGSVRLAELEAEVLQRVMRRGHSEQLIRRHG"
     gene            complement(5120..7732)
                     /gene="pepN"
                     /locus_tag="OQQ26_003388"
     CDS             complement(5120..7732)
                     /gene="pepN"
                     /locus_tag="OQQ26_003388"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HCS1858733.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
                     HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPEHFTLKIVNEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKTKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNS
                     VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE
                     MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN
                     ACLRFLAFGETHLADVLVSKQYHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH
                     QDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH
                     AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            7998..9200
                     /gene="pncB"
                     /locus_tag="OQQ26_003389"
     CDS             7998..9200
                     /gene="pncB"
                     /locus_tag="OQQ26_003389"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706850.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HCS1858734.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
                     DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
                     DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
                     TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
                     AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
                     YQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
                     SFGIGTRLTCNIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPHIKKAS"
     gene            9369..10769
                     /gene="asnS"
                     /locus_tag="OQQ26_003390"
     CDS             9369..10769
                     /gene="asnS"
                     /locus_tag="OQQ26_003390"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HCS1858735.1"
                     /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNANF"
     gene            11370..12458
                     /gene="ompF"
                     /locus_tag="OQQ26_003391"
     CDS             11370..12458
                     /gene="ompF"
                     /locus_tag="OQQ26_003391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HCS1858736.1"
                     /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY
                     FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
                     TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
                     YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
                     TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
                     QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
                     YIINQIDSDNKLGVGSDDTVAVGIVYQF"
BASE COUNT         2985 a         3103 c         3216 g         3193 t
ORIGIN      
        1 ggtactaatt aataaaacaa ttaatgagtt ctattaataa tagttaatat ggaaatttgt
       61 taccgcattc acattaccag aagtcgcttt ccccgtagcg atataatcaa ctttaaaggt
      121 cactgtttgc tcagcagaat ccgctaactg aatattcgac gtttcggtac cgggagttac
      181 cgatgtagaa ccatctggca gatacatttg tagagcaaca ttcgtcgctg catcggtggt
      241 agcctggttg gcaaatgctg taggttgcac gccgtcagcc gtaccactaa aggtaaacgt
      301 cgcattttta gttacagtaa catcacagcc ttctaaggca attggtacat cagttttaac
      361 gccagagact gctccattag tttgcaactt ggtggcgctg acatttggca atgtgactac
      421 tgaatctttc gtcgcagcta ccagggtaca agctggagca ataactttac cattaaatgt
      481 tactttgcca tccgtgatag cattatcatc agctgccata acactggacg ttgcacatac
      541 cacagttata aacgccgtca atacactttt tttcatcgtc atcatcctga tctcttcgta
      601 aatatgataa tgcctttaaa tgacattggg cttaataata acaacaattg tccgccattt
      661 aaatcaagca tactaaatcc aataagtgac aaatctttaa tttatagatt tcatgaatat
      721 ttaaatatta actgaacgag taattcattg attcaacatc taatgactat ccaataaata
      781 aatattcgtg atatataaag ccctttcttt agtttatttt cagaaaaaga tacacaaaat
      841 ttatatttgg cattttcttg tctctccgac agactgaccg aattgttatc aatgttaaca
      901 aaaaaagaac aattggttat aaggagagag tatgcgtgtc atcaccctgg cgggtagtcc
      961 tcgctttcct tctcgctcca gctccttgct ggaatatgcg cgggaaaaac taaatggcct
     1021 ggatgtagag gtttatcact ggaatctgca aaacttcgcc ccggaagatc tactttatgc
     1081 tcgtttcgat agtccggcac tcaagacctt caccgaacag ttgcaacagg ctgatggact
     1141 gatagtcgct acacctgtgt ataaagccgc ctattccggc gcgctgaaaa ccctgctcga
     1201 tctgctgcca gaacgtgcgt tacaaggcaa agtagtgcta ccgctggcga cgggcggcac
     1261 ggtggctcat ctgctggcgg tcgattacgc acttaagcca gttttaagtg cgctaaaagc
     1321 ccaggagatc ctgcacggcg tgtttgccga tgactctcag gtgattgatt accatcacaa
     1381 accacagttc acgccaaatc tgcaaacccg tcttgatacc gcactagaaa ctttctggca
     1441 ggcgctgcac cgccgtgatg ttcaggttcc tgaccttctg tctctgcgag gtaatgccca
     1501 tgcgtaacat cattaaactg gcgctggcgg gaatgcttag cgtctccaca ctcgcggctg
     1561 ccgcagagtc ttcgccagag gcgttacggg ttggctatca gaaaagcaac atcagttcgg
     1621 tgctggcgaa aaataaccaa atgctggaaa aacgctatcc gcaaacaaaa atctcctggg
     1681 tggagtttcc cgctggcccg cagatgctgg aggcgttaaa cgttggcagt attgatctcg
     1741 gcagtaccgg ggatattccg ccaatctttg cccaggctgc cggggctgat ttggtatacg
     1801 tgggcgtcga gccgccgaag ccaaaagccg aggtgattct ggtagcagaa aacagcccga
     1861 tcaaaaccgt agccgatctt aaaggccaca aagttgcctt tcagaaaggc tccagttcac
     1921 acaacctttt actgcgtgca ctgcgtcagg ccggacttaa gtttaccgat atccagccca
     1981 cttacctgac acccgctgat gcccgcgccg cgttccagca aggtaacgtc gacgcctggg
     2041 ctatctggga tccctactac tccgctgcgt tattacaggg cggcgtgcgg gtgctgaaag
     2101 acggcaccga tctcaatcaa actggatcgt tttatctggc agctcgtccc tatgcagaaa
     2161 aaaacggcgc ttttattcag ggcgtactgg caacctttag tgaggccgat gcgttaaccc
     2221 gcagccagcg cgagcaaagc atcgctttac tggcaaaaac gatgggctta ccggcaccgg
     2281 tgattgcctc ttacttagat catcgccctc ctaccaccat caaaccggtt aacgccgagg
     2341 ttgccgcctt acagcagcaa acggcagatc tgttttatga aaaccgtctg gtgccgaaaa
     2401 aagtcgatat tcgccagcgc atctggcagc ccactcaact ggaaggaaaa caattatgag
     2461 tctgaatatg ttctggtttt taccgaccca cggtgacggg cactatctgg gaacggaaga
     2521 aggttcacgc ccggttgatc acggttatct gcaacaaatt gcgcaagcgg cggatcgtct
     2581 gggctatacc ggtgtgctga tcccaacggg gcgatcgtgt gaagatgcgt ggctggttgc
     2641 agcgtcgatg atcccggtga cgcagcggct gaagtttctt gtcgccctgc gtcccagcgt
     2701 aacctcacct accgttgccg ctcgccaggc cgccacgctt gaccgtctct caaatggtcg
     2761 tgcgttgttt aatctggtca caggcagcga tccacaagag ttggcaggcg acggcgtgtt
     2821 ccttgatcat agcgagcgct acgaagcctc ggcggaattt acccaggtct ggcggcgctt
     2881 attgctgggg gaaagcgtcg atttcaacgg taaacatatt catgtgcggg gagccaaact
     2941 gctcttcccg ccgattcaac agccgtatcc tccgctttac tttggcggat cgtcagacgt
     3001 cgcccaagag ctggcggcag aacaagttga tctctacctc acctggggtg aaccgccgga
     3061 attggttaaa gagaaaatcg aacaagtgcg ggcgaaagct gccgcgtatg ggcgcaaaat
     3121 tcgtttcggt attcgtctgc atgtgattgt tcgcgaaacc aacgatgaag cgtggcaggc
     3181 cgccgagcgg ttaatctcgc atctggaaga agcgtatcgg gttggcgagt tgctgttccc
     3241 gcatctggat gtcgccattc cggaaatacc ccagccgcag ccgctgaatc cgcaaggcga
     3301 agcggtggca aatgatttta tcccccgtaa agtcgcgcaa agctaaggaa cacgatgatg
     3361 gcaacgccag tgaagaagtg gttattgcgc gttgccccct ggtttttacc ggtgggcatc
     3421 gtggcggtgt ggcaactggc ctcctcggtt ggctggctgt cgacgcgtat tttgccttca
     3481 ccggaaggag tggtgacggc gttctggacg ctctccgcca gcggcgaatt gtggcagcat
     3541 ctggcgatca gttcctggcg ggcgctgatt ggcttttcaa ttggcggatc gctgggcttg
     3601 attctgggac tgattagcgg gctgtcacgc tggggagaac ggctgctgga tacctcaatt
     3661 cagatgttgc gcaacgtacc gcatctggcg ctgatcccgc tggtgatttt gtggtttggc
     3721 attgatgaat ccgcaaaaat ctttctggtg gcgctcggca cgctattccc catttatatc
     3781 aacacctggc atggcatccg taatatcgat cgcggtctgg tggaaatggc gcgtagctat
     3841 ggattatccg gcataccgct gtttatccat gtgatcctgc ctggtgccct gccctcaatt
     3901 atggtcggcg tgcgttttgc gttgggcctg atgtggctga cgctgattgt tgccgaaacc
     3961 atttctgcca attcaggcat tggttatctg gcgatgaatg cgcgggagtt tttgcaaacg
     4021 gacgtggtgg tagtcgctat tattctttac gccctgctcg gcaaacttgc tgacgtcagc
     4081 gcgcagctgt tagagcgcct ctggttgcgc tggaacccgg cttatcattt gaaggaggcc
     4141 acggtatgaa tactgctcgt ctgaaccagg gcacaccatt gttgctcaat gcagtaagca
     4201 aacattacgc ggaaaatatc gtcctgaacc aactggattt acatattccg gcaggtcagt
     4261 ttgtggcggt ggtgggccgc agcggtggtg gcaaaagtac cctgctgcgc ctgctggcag
     4321 gtctggaaac gccaaccgca ggcgatgtgt tagcgggtac cacaccgctg acagagattc
     4381 aggatgatac gcgaatgatg tttcaggatg cgcgtctgct gccgtggaaa tcggtgattg
     4441 ataacgttgg gttaggcctt aaaggtcagt ggcgcgatgc cgcgcgtcgg gcgttggctg
     4501 cggtaggact ggagaatcgc gccggggaat ggcctgccgc actttctggc gggcagaaac
     4561 agcgtgtggc gctggcaaga gcgttgattc atcgaccggg tttattgttg cttgatgaac
     4621 cgctcggggc actggacgcc ttaacgcgac tcgagatgca ggatttgatt gtgtcacttt
     4681 ggcagcagca cggctttacc gtactgttgg tgacgcatga tgtgagcgaa gcggtagcaa
     4741 tggctgaccg ggtgttgtta attgaagagg gaaaaattgg tctggatttg acagtggata
     4801 tcccccgtcc gcgtcgatta gggtcggtgc gattagcgga gctggaagcg gaagtattgc
     4861 aacgggtaat gcggcgtggg cattctgaac aactgattcg gcgtcatggt taatatgccg
     4921 gatgtggcgc acaaaaccag cattttcaac ggacttgtag gcctgataag acacgtcaag
     4981 catcgcatca ggcagttggg cacggctgcc ggatgcggcg tgaacgcctt atccagccta
     5041 caaaaccagc aatttcaacg gagttgtagg cctgataaga cgcgtcaagc gtcgcatcag
     5101 gcattttggc tcaaaagtat caagccagtg ctttggtgat cttctcgtac agatcgccag
     5161 agagattttc cagccctttc aactgttcca gcgccgcgcg cattttctcc tgacgtttgg
     5221 catcataacg tttcaggcga atcagcggtt caatcagacg tgaagctacc tgcgggttac
     5281 ggctgttgag gtcggtaagc atttccacca ggaactggta accgctgcca tcttcggcat
     5341 ggaacgctgc cgggttgctg cccgcaaacg caccaatcaa cgaacgaata cggttcgggt
     5401 tgctcatggt aaatgagcga tgctgcaaca gaccacgcac cgtctccagc acattcgccg
     5461 ccgggctggt ggcttgcagg ataaaccatt tatccatcac cagaccgtcc tgatgccact
     5521 tatcgtcgta ctcctgcatc agcgcgtcac ggcaaggcag ctgtgcagca accgccgcag
     5581 aaagcgctgc cagcgcatcg gtcatattgt ttgcttcatg gtattgcttg ctcaccagca
     5641 cgtcagccag atgcgtttca ccaaaagcaa ggaagcgcag gcaggcatta cgcagagtgc
     5701 gttttgcaat atcttcatgc tcaacacggt actcgctctg gtaattcgcg ttgtaaatag
     5761 ccagcagctc atccgccagt tcagtcgcca gagtacgagt gagtgcttcg cgtacttcgg
     5821 caatagcaat cgggtcgatg atatcgaaca gttcagccat ttcattgaca gaaggcagcg
     5881 tcaggatttc tgccgccagc gccggatcaa tcttctcatc gagcagcacc gcgcggaaag
     5941 cgtcagccac atgtaccggc agagacagcg gctgcccttg ctgatgacgg gcgacgttca
     6001 gcttgatgta ggttgccagc aaactttgcg ccgcatccca acgggagaaa tcattacgcg
     6061 catgacgcat caggaaggtc agttgctgat cgctccactt atattccagt ttcactggcg
     6121 cagagaattc gcacagcagc gcaggcaccg gctggaagta gacattatca aaaacaaagg
     6181 tctgttccgc ctgggtgacg ttcagcacgg aattcaccgg atgaccgcct ttctgcaacg
     6241 ggatcacttt gccttcgttg tcatacaatt cgatggcaaa tggaatatgc agcggctgtt
     6301 tttctgcctg atccggcgtg gctggcgtgc gctggctgat ggtcagggtg tactgctcgg
     6361 tttccggatt gtagtcgtct ttgacggtca caatcggcgt gccggactgg ctgtaccaac
     6421 ggcggaaatg ggagagatcg acattcgacg catcttccat cgcctgcaca aagtcgtcgc
     6481 aggttgccgc gctgccatca tggcgctcga aatagagttg catccctttc tggaagtttt
     6541 cttcgcccag cagggtgtgg atcatacgga tcacttccgc gcccttctcg taaacggtca
     6601 gggtgtagaa gttgttcatc tcaatgacca tgtccgggcg gatcgggtgc gccatcgggc
     6661 tggcgtcttc cgcaaactgc aatccgcgca tggtgcgcac attattgatg cggttaactg
     6721 cacgggaacc aaggtcagag ctgaattcct gatcgcggaa gacggttaaa ccttctttca
     6781 ggctgagctg gaaccagtcg cggcaggtga ctcggttacc ggtccagtta tggaaatatt
     6841 catggccgat aacgcgttca atatcgaggt aatctttgtc agtggcggtg tcggtgcggg
     6901 ccagcacata tttggagtta aagatattca gacccttatt ctccattgcg cccatattga
     6961 agaaatccac cgcgacgatc atatagatgt cgaggtcata ctccaggccg aagcgttctt
     7021 catcccattt cattgagttt ttcagcgagg tcatcgccca cggcgcgcga tcaaggttgc
     7081 cgcgatcgac gtacagctcc agcgccactt cgcgaccaga acgcgtggta aaggtgtcgc
     7141 gcagtacatc aaagtcgcct gccaccagcg caaacaggta gcacggtttc gggaacgggt
     7201 cctgccactg tacccaatgg cgtccgtttt ccagttcacc ttgcgcaacg cggttaccgt
     7261 tggaaagcag gaagggatat ttggttttat cggcaataat tttggtggta aaacgcgcca
     7321 gcacgtccgg gcggtcgaga taatacgtaa tatggcggaa accttcggct tcacactggg
     7381 tgcaaagcgc atcgcctgac tgataaagcc cttccagcgc ggtattcgcc gccgggctta
     7441 tttcattaac gatcttaagc gtaaaatgct ccggcaaatt actgatgacc agtgcgccct
     7501 cttcttcttt ccaggcggtc cacggctcat cattaatatg aacagaaacc agtttgaggt
     7561 cttcgccgtt gagacgaagt ggagcatctg atgcaccatg acggacagcc tggctgaccg
     7621 cggtaacgac cgtcttttgc gcgtcgaggt caaaggtcaa gtcaatatca gtaatctggt
     7681 aatccggcgc acgataatcg tgacggtatt tggcttgtgg ctgttgagtc ataaataacc
     7741 tttagcatct tttatagagt ctggtgttca gtctattcct gttgcgtaaa tcgcgctatg
     7801 cagaatcttc atcttttcag gtacaaacgc ctttattgct acatttttat aacatacacc
     7861 gcgtaatgcc atcgaccaga aaggtggcat atggtgtgat cggggttcaa taaattgcaa
     7921 aacaaggtat actccagcag ttcctgaaga tgtttattgt actaaacgct cctgtacgag
     7981 gacgctactg cgcacctatg acacaattcg cttctcctgt tctgcactcg ttgctggata
     8041 cagatgctta taagttgcat atgcagcaag ccgtgtttca tcactattac gatgtgcatg
     8101 tcgcggcgga gtttcgttgc cgaggtgacg atctgctggg tatttatgcc gatgctattc
     8161 gtgaacagat tcaggcgatg cagcacctgc gcctgcagga tgatgaatat cagtggctct
     8221 ctgccctgcc tttctttaag gccgactatc ttaactggtt acgcgagttc cgctttaacc
     8281 cggaacaagt caccgtgtcc aacgataatg gcaagctgga tattcgctta agcggtccgt
     8341 ggcgtgaagt catcctctgg gaagttcctt tgctggcggt tatcagtgaa atggtacatc
     8401 gctatcgctc accgcaggcc gacgttgcgc aagccctcga cacgctggaa agcaaattag
     8461 tcgacttctc ggcgttaacc gccggtcttg atatgtcgcg cttccatctg atggattttg
     8521 gcacccgtcg ccgtttttct cgcgaagtac aagaaaccat cgttaagcgt ctgcaacagg
     8581 aatcctggtt cgtgggcacc agcaactacg atctggcgcg tcggctttcc ctcacgccga
     8641 tgggaacaca ggcacacgaa tggttccagg cacatcagca aatcagcccg gatctagcca
     8701 acagccagcg agctgcactt gctgcctggc tggaagagta tcccgaccaa cttggcattg
     8761 cattaaccga ctgcatcact atggatgctt tcctgcgtga tttcggtgtc gagttcgcta
     8821 gtcggtatca gggcctgcgt catgactctg gcgacccggt tgaatggggt gaaaaagcca
     8881 ttgcacatta tgaaaagctg ggaattgatc cacagagtaa aacgctggtt ttctctgaca
     8941 atctggattt acgcaaagcg gttgagctat accgccactt ctcttcccgc gtgcaattaa
     9001 gttttggtat tgggactcgc ctgacctgca atatccccca ggtaaaaccc ctgaatattg
     9061 tgattaagtt ggtagagtgt aacggtaaac cggtggcgaa actttctgac agccctggca
     9121 aaactatctg ccacgataaa gcgtttgttc gggcgctgcg caaagcgttc gaccttccgc
     9181 atattaaaaa agccagttaa tatcatcagg gagctaatcg gctccctttt tttaccttta
     9241 attccgaaat ctttcgctgc atttgcgaat tctgcttgtc tgattgcaga tgccaggtaa
     9301 cataggtatc cccccattta cgggtggaca agtgtttatt ttttccgact attaacagag
     9361 agaatattat gagcgttgtg cctgtagccg acgtactcca gggccgcgta gccgttgaca
     9421 gcgaagtcac cgtacgcgga tgggtacgta cccgccgaga ttcaaaagct ggcatctcct
     9481 tcctcgccgt ttatgacggt tcctgctttg atcctgtaca ggctgtcatc aataattctc
     9541 tgcccaatta caatgaagac gtcctgcgtc tgaccaccgg ttgctcggtc attgtgacgg
     9601 gtaaggtcgt ggcgtcgccg ggccaggggc aacaatttga aattcaggcc agcaaggttg
     9661 aagttgctgg ttgggttgaa gatccagaca cttacccgat ggcggcaaaa cgccacagca
     9721 ttgagtatct gcgtgaagtc gctcacctgc gtccgcgcac aaacctgatt ggtgccgtcg
     9781 cgcgcgttcg ccatacgctg gcgcaggcgc tgcatcgctt ctttaacgag cagggattct
     9841 tctgggtttc aacgccactg attactgcgt ctgataccga aggggctggc gaaatgttcc
     9901 gcgtttctac gctggatctg gaaaacctgc cgcgtaacga tcagggcaaa gtggatttcg
     9961 acaaagactt ctttggtaaa gagtctttcc tgaccgtatc tggccagttg aacggcgaaa
    10021 cctacgcttg cgcattatcc aaaatttata ccttcggccc gactttccgt gctgaaaact
    10081 ccaacaccag ccgtcacctg gcggaattct ggatgctgga gccggaagtg gcgtttgcta
    10141 acctgaacga tatcgcgggt ctggctgaag ccatgctgaa atatgtcttc aaagcggttc
    10201 tcgaagaacg cgcagacgac atgaaattct tcgctgaacg cgtagataaa gatgccgttt
    10261 cacgtctgga acgcttcatt gaggccgatt tcgcgcaggt ggattacacc gacgcagtga
    10321 ccattctcga aaactgcggc aggaagtttg aaaacccggt ttactggggc gtcgatctct
    10381 cttctgagca tgagcgttat ctggcggaag aacactttaa agcaccggta gtggttaaaa
    10441 actatccgaa agatattaaa gcgttctata tgcgcctcaa cgaagacggt aaaaccgttg
    10501 cggctatgga cgttctggct ccgggcatcg gtgagatcat tggtggctcc cagcgtgaag
    10561 aacgtctgga cgttctggac gagcgtatgc tggaaatggg cctgaataaa gaagattact
    10621 ggtggtatcg cgatctgcgt cgctacggta ctgttccgca ttcaggtttc ggtcttggtt
    10681 ttgaacgcct gattgcttac gtaactggcg tgcaaaacgt gcgtgatgtg attccgttcc
    10741 cacgtactcc gcgcaacgcc aacttctgat tttcttcctc aaagagccag cgcctgctgg
    10801 ctctttttta tcctttctgt caagttatct gtttgttaag tcaagcaatc tatttgcaac
    10861 cccgccataa cgatcatcct gttacggaat attacattgc aacatttacg cacaaaaaat
    10921 aacccgcatt cttattgcgg attagttttt tcttagctga tagcacaatt tttatactat
    10981 tttttggcat tctggatgtc tgaaagagga ttttgtgcca ggtcgataaa gtttccatca
    11041 gaaacaaaat ttccgtttag ttaatttaaa tataagtaaa tcatataaat agataaaaat
    11101 tgctgtaaat atcatcacgt ttctatggaa atatgacggt gttcacaaag ttccttagtt
    11161 tttatttttg gttacatatt ttttcttttt gaaactaagt ctttatcttt gtagcacttt
    11221 cacagtagcg aaacgttagt ttgaatggaa agatgcctgc agacacataa agacaccaaa
    11281 ctctcatcaa tagttccgta aatttttatt gacagaactt attgacggca gtggcaggtg
    11341 tcataaaaaa accatgaggg taataaataa tgatgaagcg caatattctg gcagtgatcg
    11401 tccctgctct gttagtagca ggtactgcaa acgctgcaga aatctataac aaagatggca
    11461 acaaagtaga tctgtacggt aaagctgttg gtctgcatta tttttccaag ggtaacggtg
    11521 aaaacagtta cggtggcaat ggcgacatga cctatgcccg tcttggtttt aaaggggaaa
    11581 ctcaaatcaa ttccgatctg accggttatg gtcagtggga atataacttc cagggtaaca
    11641 actctgaagg cgctgacgct caaactggta acaaaacgcg tctggcattc gcgggtctta
    11701 aatacgctga cgttggttct ttcgattacg gccgtaacta cggtgtggtt tatgatgcac
    11761 tgggttacac cgatatgctg ccagaatttg gtggtgatac tgcatacagc gatgacttct
    11821 tcgttggtcg tgttggcggc gttgctacct atcgtaactc caacttcttt ggtctggttg
    11881 atggcctgaa cttcgctgtt cagtacctgg gtaaaaacga gcgtgacact gcacgccgtt
    11941 ctaacggcga cggtgttggc ggttctatca gctacgaata cgaaggcttt ggtatcgttg
    12001 gtgcttatgg tgcagctgac cgtaccaacc tgcaagaagc tcaacctctt ggcaacggta
    12061 aaaaagctga acagtgggct actggtctga agtacgacgc gaacaacatc tacctggcag
    12121 cgaactacgg tgaaacccgt aacgctacgc cgatcactaa taaatttaca aacaccagcg
    12181 gcttcgccaa caaaacgcaa gacgttctgt tagttgcgca ataccagttc gatttcggtc
    12241 tgcgtccgtc catcgcttac accaaatcta aagcgaaaga cgtagaaggt atcggtgatg
    12301 ttgatctggt gaactacttt gaagtgggcg caacctacta cttcaacaaa aacatgtcca
    12361 cctatgttga ctacatcatc aaccagatcg attctgacaa caaactgggc gtaggttcag
    12421 acgacaccgt tgctgtgggt atcgtttacc agttctaata gcacacctct ttgttaaatg
    12481 ccgaaaaaac aggactt
//
LOCUS       DAJVTL010000123        12339 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.125, whole genome shotgun sequence.
ACCESSION   DAJVTL010000123 DAJVTL010000000
VERSION     DAJVTL010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12339
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.125"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            93..1223
                     /gene="cdaR"
                     /locus_tag="OQQ26_003392"
     CDS             93..1223
                     /gene="cdaR"
                     /locus_tag="OQQ26_003392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CdaR"
                     /protein_id="HCS1858737.1"
                     /translation="MAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALL
                     VLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMT
                     AEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIV
                     EVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDH
                     RKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYF
                     YQDLMLPVLLDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKA
                     LFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER"
     gene            complement(1312..1698)
                     /locus_tag="OQQ26_003393"
     CDS             complement(1312..1698)
                     /locus_tag="OQQ26_003393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HCS1858738.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
                     SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
                     DLRHLESVVTNKISEIEADLEKLTRK"
     gene            complement(1860..2672)
                     /gene="yaeI"
                     /locus_tag="OQQ26_003394"
     CDS             complement(1860..2672)
                     /gene="yaeI"
                     /locus_tag="OQQ26_003394"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414706.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase YaeI"
                     /protein_id="HCS1858739.1"
                     /translation="MISRRRFLQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKD
                     NAAPFKILFLADLHFSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFS
                     DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRHFE
                     LVGTGDLWAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRLP
                     LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV"
     gene            complement(2727..3551)
                     /gene="dapD"
                     /locus_tag="OQQ26_003395"
     CDS             complement(2727..3551)
                     /gene="dapD"
                     /locus_tag="OQQ26_003395"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HCS1858740.1"
                     /translation="MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
                     TGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAAIVKKVDAKTRGKVGINELLRTID"
     gene            complement(3582..6254)
                     /gene="glnD"
                     /locus_tag="OQQ26_003396"
     CDS             complement(3582..6254)
                     /gene="glnD"
                     /locus_tag="OQQ26_003396"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HCS1858741.1"
                     /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ
                     RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
                     NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
                     YSTTLRQLRHARRHLQQPLCNIPQARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
                     IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
                     HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
                     TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
     gene            complement(6316..7110)
                     /gene="map"
                     /locus_tag="OQQ26_003397"
     CDS             complement(6316..7110)
                     /gene="map"
                     /locus_tag="OQQ26_003397"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HCS1858742.1"
                     /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
                     CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
                     DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
     gene            7478..8203
                     /gene="rpsB"
                     /locus_tag="OQQ26_003398"
     CDS             7478..8203
                     /gene="rpsB"
                     /locus_tag="OQQ26_003398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HCS1858743.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            8461..9312
                     /gene="tsf"
                     /locus_tag="OQQ26_003399"
     CDS             8461..9312
                     /gene="tsf"
                     /locus_tag="OQQ26_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HCS1858744.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKTVGQMLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            9459..10184
                     /gene="pyrH"
                     /locus_tag="OQQ26_003400"
     CDS             9459..10184
                     /gene="pyrH"
                     /locus_tag="OQQ26_003400"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HCS1858745.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            10476..11033
                     /gene="frr"
                     /locus_tag="OQQ26_003401"
     CDS             10476..11033
                     /gene="frr"
                     /locus_tag="OQQ26_003401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HCS1858746.1"
                     /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
                     QKLTDAAIKKIEAALADKEAELMQF"
     gene            11125..12321
                     /gene="ispC"
                     /locus_tag="OQQ26_003402"
     CDS             11125..12321
                     /gene="ispC"
                     /locus_tag="OQQ26_003402"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HCS1858747.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
                     QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEEVDQVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
                     PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE
                     VMRLAS"
BASE COUNT         3041 a         3008 c         3314 g         2976 t
ORIGIN      
        1 ctttgggcat ttgcacaatg ccgtacgtta cgtacttcct tatgctaagc cgtgcataac
       61 ggaggactta tggctggcat cttgatacca aaatggcgca ggatatcgtg gcacgtacca
      121 tgcgcatcat cgataccaat atcaacgtaa tggatgcccg cgggcgaatt atcggcagcg
      181 gcgatcgtga gcgtattggt gaattgcacg aaggtgcatt gctggtactt tcacagggac
      241 gagtcgtcga tatcgatgac gcggtagcac gtcatctgca cggtgtgcgg caggggatta
      301 atctaccgtt acggctggaa ggtgaaattg tcggcgtaat tggcctgaca ggtgaaccag
      361 agaatctgcg taaatatggc gaactggtct gcatgacggc tgaaatgatg ctggaacagt
      421 cgcggttgat gcacctgttg gcgcaggata gccgtttgcg ggaagaactg gtgatgaacc
      481 tgattcaggc tgaggagaat actcccgcac ttactgaatg ggcgcaacgg ctggggatcg
      541 atctcaatca accgcgagtg gtggctattg ttgaggtcga cagcggtcag cttggtgtgg
      601 acagcgcaat ggcggagtta caacaactgc aaaacgcgct gactacgccc gagcgtaata
      661 atctggtggc gattgtctcg ctgaccgaaa tggtggtgtt gaaaccggcg ttgaactctt
      721 ttgggcgctg ggatgcagaa gatcatcgta agcgagttga acaactgatt acccgcatga
      781 aagagtacgg ccagctgcgt tttcgcgttt cgctgggcaa ctattttacc ggtcctggca
      841 gtattgcccg atcctatcgt acggcgaaaa cgacgatggt ggtgggtaaa cagcggatgc
      901 cagaaagtcg ctgctatttt tatcaggatc tgatgttacc tgtgttactc gacagtttgc
      961 gtggcgactg gcaggccaac gaactggcgc gaccgctggc gcggctgaaa gcgatggaca
     1021 ataacggctt gctgcggcga acgctggcgg cgtggtttcg tcacaatgtg caaccgctgg
     1081 caacgtcaaa ggcgttgttt attcatcgta ataccctgga gtatcggctt aatcgtatat
     1141 cggaactgac cgggcttgat ttgggcaatt ttgatgacag gttgctgctg tatgtggcgt
     1201 tacaactgga tgaagagcgg taggttatgc gttaaggttg aggcggcgct ggcttattcc
     1261 cctcagcccg aagggtagag gggaatgccc gagttaaccg tcagttcgag attatttacg
     1321 cgttagtttt tccagatcgg cttcaatctc gctgatctta ttggttacga ctgactccag
     1381 gtgacgtaag tcgtcgagga tcttacgctt aagatcaact tcgctgcggt cacgctggca
     1441 gatttgatca agctcatcaa tgatataccg tagattcggg ctgatttcct ggacttcttt
     1501 ataaccctga cccacaccat cagcgacgac cgttttacgc tgacgcggat atttaaactt
     1561 cacgctcttg gcgaaaaact cgcctttgtc tttctggaaa tagattttca gaatatcgtt
     1621 gttggcttcc tgccggaggc tgtaacgatc aatttcttca ggattggtaa tacccagact
     1681 tttcagattg tcgtacatag cgttacctca aaatgagtca gtaaattgtg cttattttag
     1741 catttggcct ggcccgcccg gctcgactgt gaccgcagaa agcctttttc ttccagactt
     1801 ctatcatggc gtaaaaatca aaaaattacc tgctttattg tggcgataaa attcacgttc
     1861 tacaccagtt ccagcatcgt tacttccggg cggcagttca gacgcaaacc atacaaactg
     1921 cccacgccac gggttgtgta gatgtgtcgt tcgccaaagg catttaatcc ggcgacgtaa
     1981 cgtttatctt cgacaggggc aaaaggttca ccaaccaacg gtaggcgcag ttgcccgcca
     2041 tgagtatggc cgcacagcat cagatcccag ggttcatcac gcatgacttc tttgctgtcg
     2101 ggattatgtg ccagcatcag tcttggcaga tttgcttcgc tggcgggagg tggtttgcat
     2161 tgtccggccc ataagtcacc ggtgcctacc agttcgaagt gtctgttcgg cgtggcgatc
     2221 accgtagcct ggttaaacaa caccgtgatg cccgctgatt tcaacgtctc gccaattaag
     2281 tgattttttt ctgtaccaac agggcgatcg tggttgccga agcaggcaaa cgtcggcgca
     2341 cattcggcaa ggggggagag gacgtcacta aacgccgaaa aattcagcgg catatcaaat
     2401 aatacgtaat cgccgcccag taatatcaaa tcgggctttt gttctatgcc aagagcaatc
     2461 gcgtcagaaa tcaggcttaa aggaacaaaa cgagagaaat ggagatcggc cagaaaaaga
     2521 attttgaatg gtgctgcgtt gtctttaaaa aaggcgaggc ggtgacggat taattcaaac
     2581 cagcctggct cccagtaatg catataaccg aaacctgagc tcgtggctat cgtcgcggca
     2641 gtagcctgca aaaatcggcg gcgtgaaatc atcgctcatc cctgcaaaaa aaatcgggca
     2701 gcgtcgtgct gcccgtgtgc atacttttag tcgatggtac gcagcagttc gttaatgccg
     2761 actttgccgc gagttttcgc gtcaactttc ttaacgatag ccgcacagta gaggctgtat
     2821 ttgccatctt tcgacggcag attacctgaa acaaccacag accccgccgg aacgcgaccg
     2881 tagtggattt cgccggtttc acggtcgtaa atacgggtgc tctgaccaat gtatacgccc
     2941 atggaaatga cggaaccttc ttcgacaatc accccttcaa ccacttcaga gcgcgcgccg
     3001 atgaagcaat tatcttcaat gatggttggg ttagcctgca gcggttccag cacaccgccg
     3061 atgcccacgc caccggaaag gtggacgttt ttaccaatct gcgcacaaga accgacggtc
     3121 gcccaggtat caaccatggt gccttcatca acatatgcgc cgatgttgac gtaagacggc
     3181 atcagcacgg tgttacgggc aataaacgca ccctgacgta ccgccgcagg tggtacaacg
     3241 cggaagcctt ctttctggaa acgtgcttcg tcgtagtcgg cgaatttcat cggcactttg
     3301 tcgaagtagc ggctttctgc cccttcgatc acctgattat cattaatacg gaaagagagc
     3361 agcaccgctt ttttcaacca ctgatgcgtc acccactgac cgtcaatttt ttccgctaca
     3421 cgcagtgcgc cggaatccag cagggcgatc acctgattta ccgcttcgcg ggtaacggtg
     3481 tctgcattgg ctggcgtgat ctcggcacgg cgttcaaaag cggtttcaat aatgttctgt
     3541 aactgctgca ttgttaaact cttttcatat cagtaaacac atcacccttt atcgtttgga
     3601 ttgagggcct ctgtcaaccg ctgatgcact tcctgctgca actcgttatt aagcgcacgc
     3661 cggtcagcgg tggcaattat gaataaatct tctactcgct cgccaatggt tgtaattcgg
     3721 gcgccatgaa gcgaaattcc cagatcggca aaaattttcc cgactcgcgc cagcagccca
     3781 ggttggtcga gggcgatcag ttcgaggaac gatttgcggt cggtatgggt cggcaaaaac
     3841 gtcacttcgg tttcaacagt aaaatggcgc aatttggcgg gttggcgacg cggctgcggt
     3901 ggctgccagc tactttgtgt cagtacttgc tccagaccaa accgaataac ctcatgacga
     3961 tctgcggaca gcgggctgcc atcgggttcc agcacgataa aggtatccat cgccataccg
     4021 tcgcgagtgg tgaaaatttg tgcgtcgtga acgcttaagt tgcgtctatc taactcggca
     4081 caaacagcag caaacaagta agggcggtcc gggctccaga taaaaatctc ggtgcctcca
     4141 cgcgtagcct gcgggctaag caataccagc ggtttgctta aatcatgctg taataaatgg
     4201 cgcgcatgcc aggccagttg atttgggcta tggcggacaa aatagttagc acgacagcgt
     4261 gaccaaattt ggtgcagcgc ctcttcgtcg atgttatcca tgcgcagtag tgccagtgcc
     4321 tggagttggt gatggcgaac ccgttcgcgc atatccggcg tgttttgcat tccgcgtcgt
     4381 agctgctttt cggtggcaaa atagagttcg cgcaacagac tttgcttcca gctattccac
     4441 agcgtttcgt tggtggcgca aatgtcagcc accgtcaggc ataccagata acgaagtcgg
     4501 ttttctgttt gcacttcttc ggcaaactgc ttgatgactt ccgggtcctg aatatcgcgg
     4561 cgttgggcgg tcaccgacat caacaggtgc tggcgaacca gccacgccac cagttgcgtt
     4621 tcgcgcgagt taagcccgtg gagttcggca aaatgcacta catcctgagc accgagaatg
     4681 gagtggtcgc cgccgcgtcc tttggcgata tcgtgaaaca gcgcggcgat gaaaatcagc
     4741 tcagttgacg gcaggcgcgg ccagacgtcc acacacaacg gatggcgctg gcgcgtttct
     4801 tcactggcaa aactctccag tttcagcatc acgcggatag tatgttcatc caccgtgtag
     4861 gcgtggaaca gatcaaactg catctgcccg acgatatgcg accattgcgg catatacgcg
     4921 ccgagtacgc tatggcgatg cattggcaat agcccgcgcc gcaccgctcc ggggtgacgt
     4981 agaatgctca aaaacagttt tcgtgcttgc ggaatattac acagcggttg ttgcagatgg
     5041 cgacgggcat ggcgtaactg gcgcagcgtg gtggagtaaa tgccggtgat cgcactgttg
     5101 cgcaccatgg tgtagaacat acgtaagatg gcttccggct ggcgcataaa tagtgtttca
     5161 tcacgcaggt cgattagcgt accgcgtagc tgaaactcat cgtcgattgg acgtggtttt
     5221 tcgtcggcgg gaagggcgag gatggcttca tcaaacagtt gcagcagcat ctggttgagt
     5281 tcactgacgc ggcgtgtaac gcggaagtaa tccttcatca tccgctcgac cggttcgtta
     5341 ccttcaccac tgtaattcag acgctgggcg acgctaagct ggcgatcgaa taacaggcga
     5401 ttatcgtaac ggctgacgac aagatgcagg gcaaagcgaa tacgccacaa tatatgcaga
     5461 cattcgttta attccgctcg ctccgctgag gttaagaagc caaaccctac catttcatcc
     5521 agcgatgttg cgccaaaatg acggcgggcc acccattgca gagtgtggat atcgcgcaag
     5581 ccgccagggc tacttttgat gtctggttca aggttgtagc tggtgccgtg gtaacgctga
     5641 tggcgctggt tctgttcttc aactttcgcc gcgtagaact tgtcggaagg ccagaatcct
     5701 tcgctgaaaa tatgtttttg cagttcgagg aacagcgcaa catcgccaat taataagcgg
     5761 gattcgatta aattggtggc gacggttaaa tccgataacc cttccagcat gcactcttca
     5821 agcgtgcgca cgctatgacc gacttccagc ttcacatccc agagcagcgt taacagctcg
     5881 cccacttttt gcgcctgatc atccgggagc tttttacggc ttaaaatcag taaatcgatg
     5941 tcggaaagtg gatgcagctc gccacgacca taaccaccga cggcaaccaa tgccaggtcg
     6001 gcaatctggc tgaatcccgc ttcaatccat aatcgttgca ggagctggtc tatgaactcg
     6061 gtacgtgcct caatcaactg ttctgcggag atcccattgt caaaggcatc acccagccaa
     6121 cgctggaaag tatcgatatg ggcttttatc ccaccgacgg ttaattcatc acggggccag
     6181 acgcatggat tttgcggttg accgggcagg gtggggagtg cggtatttgc gtactgttct
     6241 ggaagggtat tcattgtgcg ccacccataa gattaaatta tcgcattaaa aaagccggca
     6301 ttcgccggct tcatcttatt cgtcgtgcga gattatcgcc gggatggtgt catccttgcg
     6361 tagcgtcaga atttcgcagc cgttatcagt caccacaata gtatgctcat attgtgcaga
     6421 caagctgcga tctttggttt ttaccgtcca gccatctttc atggtgcgga tctctttttt
     6481 acccgcgttg accattggct cgatggtgaa cgtcatccca ggtttcagta cgacgttggt
     6541 ttcacgggag tcatagtgca gcacctgcgg ttcttcatgg aagccgcgac caataccgtg
     6601 tccgcaatat tcacgaacga cggagaagcc ttctgcttcg acaaatttct gaatcgccgc
     6661 accgatttcg cgcagattaa tgcctggttt taccatgcgt agcgccaggt acaggctttc
     6721 ttgcgtgatg cggcacagac gttcgcccat gatggtcggc ttaccgacga taaacatttt
     6781 cgatgtatcg ccgtggaaac catctttgat tacggtgaca tcaatgttaa cgatatcgcc
     6841 atctttcagc agcttagcat cgtccgggat accgtggcac accacttcat taatagaaat
     6901 gcaaacggat ttcggataac cgtgatagcc gaggcaagca gaaaccgcgt gttgttcatt
     6961 aacaatgtaa tcattacaga tgcgatctag ctcgccggtg ctgacgcccg gtttaacata
     7021 tggttcgatc atctccagca cttcggcagc cagtcggcca gcgacgcgca ttttttcgat
     7081 atcttctggg gtcttgattg agatagccat taattctgtc catcagcgtc ggtgataccg
     7141 acaatatata tgtaagtgcc gtcaatagta tcacacccgg gcaaattgag aatcattctg
     7201 aatttcgcca aacgtgccac tgaaggtttt ctataataga aaattcgacg tctgatgctg
     7261 tacacagcgc caacaattat tggtgtccac gacgtatttg tggtataaag cgcgccggac
     7321 ttccgatcca tttcgtatac acagactgga cggaagcgac aatctcactt tgtgtaacaa
     7381 cacacacgta tcggcacata ttccggggtg ccctttgggg tcggtaatat gggatacgtg
     7441 gaggcataac cccaactttt atatagaggt tttaatcatg gcaactgttt ccatgcgcga
     7501 catgctcaag gctggtgttc acttcggtca ccagacccgt tactggaacc cgaaaatgaa
     7561 gccgttcatc ttcggtgcgc gtaacaaagt tcacatcatc aaccttgaga aaactgtacc
     7621 gatgttcaac gaagctctgg ctgaactgaa caagattgct tctcgcaaag gtaaaatcct
     7681 tttcgttggt actaaacgcg ctgcaagcga agcggtgaaa gacgctgctc tgagctgcga
     7741 ccagttcttc gtgaaccatc gctggctggg cggtatgctg actaactgga aaaccgttcg
     7801 tcagtccatc aaacgtctga aagacctgga aactcagtct caggacggta ctttcgacaa
     7861 gctgaccaag aaagaagcgc tgatgcgcac tcgtgagctg gagaaactgg aaaacagcct
     7921 gggcggtatc aaagacatgg gcggtctgcc ggacgctctg tttgtaatcg atgctgacca
     7981 cgaacacatt gctatcaaag aagcaaacaa cctgggtatt ccggtatttg ctatcgttga
     8041 taccaactct gatccggacg gtgttgactt cgttatcccg ggtaacgacg acgcaatccg
     8101 tgctgtgacc ctgtacctgg gcgctgttgc tgcaaccgta cgtgaaggcc gttctcagga
     8161 tctggcttcc caggcggaag aaagcttcgt agaagctgag taataaggct tgataactcc
     8221 cccaaaatag ttcgagttgc agaaaggcgg caagctcgag aattcccggg agcttacatc
     8281 agtaagtgac cgggatgagc gagcgaagat aacgcatctg cggcgcgaaa tatgaagggg
     8341 gagagccctt atagaccagg tagtacacgt ttggttaggg ggcctgcata tggccccctt
     8401 tttcactttt atatctgtgc ggtttaatgc cgggcagatc acatctccga ggattttaga
     8461 atggctgaaa ttaccgcatc cctggtaaaa gagctgcgtg agcgtactgg cgcaggcatg
     8521 atggattgca aaaaagcact gactgaagct aacggcgaca tcgagctggc aatcgaaaac
     8581 atgcgtaagt ccggtgctat taaagcagcg aaaaaagcag gcaacgttgc tgctgacggc
     8641 gtgatcaaaa ccaaaatcga cggcaactac ggcatcattc tggaagttaa ctgccagact
     8701 gacttcgttg caaaagacgc tggtttccag gcgttcgcag acaaagttct ggacgcagct
     8761 gttgctggca aaatcactga cgttgaagtt ctgaaagcac agttcgaaga agaacgtgtt
     8821 gcgctggtag cgaaaattgg tgaaaacatc aacattcgcc gcgttgctgc gctggaaggc
     8881 gacgttctgg gttcttatca gcacggtgcg cgtatcggcg ttctggttgc tgctaaaggc
     8941 gctgacgaag agctggttaa acacatcgct atgcacgttg ctgcaagcaa gccagaattc
     9001 atcaaaccag aagacgtatc cgctgaagtg gtagagaaag aataccaggt acagttggat
     9061 atcgcgatgc agtctggtaa gccgaaagaa atcgcagaga aaatggttga aggccgcatg
     9121 aagaaattca ccggcgaagt ttctctgacc ggtcagccgt tcgttatgga accaagcaaa
     9181 actgttggtc agatgctgaa agagcataac gctgaagtga ctggcttcat ccgcttcgaa
     9241 gtgggtgaag gcatcgagaa agttgagact gactttgcgg cagaagttgc tgcgatgtcc
     9301 aagcagtctt aattatcaaa aaggagccgc ctgagggcgg cttctttttg tgcccatctt
     9361 gtaaattcag ctaacccttg tggggctgcg ctgaaaagcg acgtacaatg tcgctagtat
     9421 taattcattt caatcgttga cagtctcagg aaagaaacat ggctaccaat gcaaaacccg
     9481 tctataaacg cattctgctt aagttgagtg gcgaagctct gcagggcact gaaggcttcg
     9541 gtattgatgc aagcatactg gatcgtatgg ctcaggaaat caaagaactg gttgaactgg
     9601 gtattcaggt tggtgtggtg attggtgggg gtaacctgtt ccgtggcgct ggtctggcga
     9661 aagcgggtat gaaccgcgtt gtgggcgacc acatggggat gctggcgacc gtaatgaacg
     9721 gcctggcaat gcgtgatgca ctgcaccgcg cctatgtgaa cgctcgtctg atgtccgcta
     9781 ttccattgaa tggcgtgtgc gacagctaca gctgggcaga agctatcagc ctgttgcgca
     9841 acaaccgtgt ggtgatcctc tccgccggta caggtaaccc gttctttacc accgactcag
     9901 cagcttgcct gcgtggtatc gaaattgaag ccgatgtggt gctgaaagca accaaagttg
     9961 acggcgtgtt taccgctgat ccggcgaaag atccaaccgc aaccatgtac gagcaactga
    10021 cttacagcga agtgctggaa aaagagctga aagtcatgga cctggcggcc ttcacgctgg
    10081 ctcgtgacca taaattaccg attcgtgttt tcaatatgaa caaaccgggt gcgctgcgcc
    10141 gtgtggtaat gggtgaaaaa gaagggactt taatcacgga ataattcccg tgatggataa
    10201 ataagggtaa gattccgcgt aagtatcgcg ggggcgtaag tctggttata aggcgttatt
    10261 gttgcaggca gtttggtcac ggccagcgcg cagcaaccgg agcgtacaaa agtacgtgag
    10321 gatggcgagc actgctcggg gccaaaatgg caaataaaat agcctaataa tccagacgat
    10381 tacccgtaat atgtttaatc agggctatac ttagcacact tccactgtgt gtgactgtct
    10441 ggtctgactg agacaagttt tcaaggattc gtaacgtgat tagcgatatc agaaaagatg
    10501 ctgaagtacg catggacaaa tgcgtagaag cgttcaaaac ccaaatcagc aaaatacgca
    10561 cgggtcgtgc ttctcccagc ctgctggatg gcattgtcgt ggaatattac ggcacgccga
    10621 cgccgctgcg tcagctggca agcgtaacgg tagaagattc ccgtactctg aaaatcaatg
    10681 tgtttgatcg ttcaatgtct ccggccgttg aaaaagcgat tatggcgtcc gatcttggcc
    10741 tgaacccgaa ctctgcgggt agcgacatcc gtgttccgct gccgccgctg acggaagaac
    10801 gtcgtaaaga tctgaccaaa atcgttcgtg gtgaagcaga acaagcgcgt gttgcagtac
    10861 gtaatgtgcg tcgtgacgcg aacgacaaag tgaaagcact gttgaaagat aaagagatca
    10921 gcgaagacga cgatcgccgt tctcaggacg atgtacagaa actgactgat gctgcaatca
    10981 agaaaattga agcggcgctg gcagacaaag aagcagaact gatgcagttc tgatttcttg
    11041 aacgacaaaa acgccgctca gtagatcctt gcggatcggc tggcggcgtt ttgcttttta
    11101 ttctgtctca actctggatg tttcatgaag caactcacca ttctgggctc gaccggctcg
    11161 attggttgca gcacgctgga cgtggtgcgc cataatcccg aacacttccg cgtagttgcg
    11221 ctggtggcag gcaaaaatgt cactcgcatg gtagaacagt gcctggaatt ctctccccgc
    11281 tatgccgtaa tggacgatga agcgagtgcg aaacttctta aaacgatgct acagcaacag
    11341 gggagccgca ccgaagtctt aagtgggcaa caagccgctt gcgatatggc agcgcttgag
    11401 gaggttgatc aggtgatggc agccattgtt ggtgctgctg ggctgttacc tacgcttgct
    11461 gcgatccgcg cgggtaaaac cattttgctg gccaataaag aatcactggt tacctgcgga
    11521 cgtctgttta tggacgccgt aaagcagagc aaagcgcaat tgttaccggt tgatagcgaa
    11581 cataacgcta tttttcagag tttaccgcaa cctatccagc ataatctggg atacgctgac
    11641 cttgagcaaa atggcgtggt gtccatttta cttaccgggt ctggtggccc tttccgtgag
    11701 acgccattgc gcgatttggc aacaatgacg cccgatcaag cttgccgtca tccgaactgg
    11761 tcgatgggac gtaaaatttc tgtcgattcg gctaccatga tgaacaaagg tctggaatac
    11821 attgaagcgc gttggctgtt taacgccagc gccagccaga tggaagtgct gattcacccg
    11881 cagtcagtga ttcactcaat ggtgcgctat caggacggca gtgttctggc gcagctgggg
    11941 gaaccggata tgcgtacgcc aattgcccac accatggcat ggccgaatcg cgtgaactct
    12001 ggcgtgaagc cgctcgattt ttgcaaacta agtgcgttga catttgccgc accggattat
    12061 gatcgttatc catgcctgaa actggcgatg gaggcgttcg aacaaggtca ggcagcgacg
    12121 acagcattga atgccgcaaa cgaaatcacc gttgctgctt ttcttgcgca acaaatccgc
    12181 tttacggata tcgctgcgtt gaatttatcc gtactggaaa aaatggatat gcgcgaacca
    12241 caatgtgtgg acgatgtgtt atctgttgat gcgaacgcgc gtgaagtcgc cagaaaagag
    12301 gtgatgcgtc tcgcaagctg aggataatcc ggctacaga
//
LOCUS       DAJVTL010000124        12044 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.126, whole genome shotgun sequence.
ACCESSION   DAJVTL010000124 DAJVTL010000000
VERSION     DAJVTL010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12044
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.126"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(65..1762)
                     /gene="ypdA"
                     /locus_tag="OQQ26_003403"
     CDS             complement(65..1762)
                     /gene="ypdA"
                     /locus_tag="OQQ26_003403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     YpdA"
                     /protein_id="HCS1858748.1"
                     /translation="MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKE
                     LLAVTAIFSLFALFSTWSGVPVESSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRY
                     LIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWA
                     PTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLP
                     LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQ
                     AMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV
                     GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR
                     QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC
                     CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVHIAVRDTGHGIDPKVIERV
                     EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPNQRPPVASQATLLL"
     gene            2139..3377
                     /gene="alaC"
                     /locus_tag="OQQ26_003404"
     CDS             2139..3377
                     /gene="alaC"
                     /locus_tag="OQQ26_003404"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HCS1858749.1"
                     /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
                     VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSVLARIKSYHDYG
                     TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKI
                     PEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA
                     MFRADGLLPASSKHIHENAE"
     gene            complement(3441..3512)
                     /gene="ypdK"
                     /locus_tag="OQQ26_003405"
     CDS             complement(3441..3512)
                     /gene="ypdK"
                     /locus_tag="OQQ26_003405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HCS1858750.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
     gene            complement(3868..4788)
                     /gene="lpxP"
                     /locus_tag="OQQ26_003406"
     CDS             complement(3868..4788)
                     /gene="lpxP"
                     /locus_tag="OQQ26_003406"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311285.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HCS1858751.1"
                     /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI
                     GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS
                     RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLYITPEMEGYPADENQAAAYMNKII
                     EKEIMRAPEQYLWIHRRFKTRPVGESSLYI"
     gene            5141..5383
                     /locus_tag="OQQ26_003407"
     CDS             5141..5383
                     /locus_tag="OQQ26_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HCS1858752.1"
                     /translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
                     FTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR"
     gene            complement(5460..5735)
                     /gene="ypdI"
                     /locus_tag="OQQ26_003408"
     CDS             complement(5460..5735)
                     /gene="ypdI"
                     /locus_tag="OQQ26_003408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis lipoprotein YpdI"
                     /protein_id="HCS1858753.1"
                     /translation="MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAM
                     TTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYPTKANYLIHPVR"
     gene            6031..6663
                     /locus_tag="OQQ26_003409"
     CDS             6031..6663
                     /locus_tag="OQQ26_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HCS1858754.1"
                     /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA
                     AERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKT
                     NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
                     NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
     gene            7176..8426
                     /gene="frc"
                     /locus_tag="OQQ26_003410"
     CDS             7176..8426
                     /gene="frc"
                     /locus_tag="OQQ26_003410"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HCS1858755.1"
                     /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
                     TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
                     DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
                     LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
                     DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
                     WENTCKAIGKPDWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
                     CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
                     TAAVLQELGYSDDEIAAMKQNHAI"
     gene            8480..10174
                     /gene="oxc"
                     /locus_tag="OQQ26_003411"
     CDS             8480..10174
                     /gene="oxc"
                     /locus_tag="OQQ26_003411"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HCS1858756.1"
                     /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
                     GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI
                     SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRASVSGRPG
                     GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
                     GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAATARSFALANADVVML
                     VGARLNWLLAHGKKGWAADAQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELK
                     QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLV
                     NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
                     GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
                     FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
     gene            10244..11188
                     /gene="yfdV"
                     /locus_tag="OQQ26_003412"
     CDS             10244..11188
                     /gene="yfdV"
                     /locus_tag="OQQ26_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter YfdV"
                     /protein_id="HCS1858757.1"
                     /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
                     LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
                     IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
                     NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
                     LAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
                     IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
     gene            11262..>12044
                     /gene="yfdE"
                     /locus_tag="OQQ26_003413"
     CDS             11262..>12044
                     /gene="yfdE"
                     /locus_tag="OQQ26_003413"
                     /EC_number="2.8.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA:oxalate CoA-transferase"
                     /protein_id="HCS1858758.1"
                     /translation="MTNNESKGPFEGLLIIDMTHVLNGPFGTQLLCNMGARVIKVEPP
                     RHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFR
                     PGTMEKLGFSWERLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
                     DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
                     YIATGKSPQRLGNRHPYMAPFDVFDTQDKSITICCGNDKLFSA"
BASE COUNT         3190 a         2684 c         2920 g         3250 t
ORIGIN      
        1 ctcagttcct gttgtgccag gaattcgtct tcaacaatga tgactttcac aatatcactc
       61 cggctcaaag caataacgta gcctgtgagg cgactggggg gcgttggtta ggaatgtaaa
      121 acgcaatttc cgtccccggc tccaggcggc ggatatgcag cccctcgcca tacaataact
      181 tcacgcgatg atggacattc agcaggccaa ttttattgcc cggcatttca ttcgcttcga
      241 cccgctcaat cacctttgga tcgatgccgt gcccggtatc tcgcaccgca atgtgtaccc
      301 gattaccgca ctctgcaacg ctgatggtga caacgccttt acctttgcaa ggctgaatac
      361 cgtggacaat ggcgttctcc accaacggct ggatcagcag gctgggaatg cagcaattca
      421 cctcttcatc aatatcatag ataaccgtca gcttgtcgcc aaagcgggcc tgctcaatgg
      481 caatatagtc tttaatttga tacagctctt ttttgatatc gatttgctca tcgtctttta
      541 attcaatgtt atagcgcaga taacgcgaca gattaaagat tagctggcga gcggtatccg
      601 gatttagtcg gattgacgat gaaatagcgt tcagagcatt aaacagaaaa tggggattaa
      661 ttttgctttg cagggcgcga agctctgcct tatttgccat ttcacgtagc tgctcggcgc
      721 gtgaaacctc cagttgcgtg gagatgattt gcgacagacc gaccgccatt tcctgtaatg
      781 acgaggtgat ctgatgcgcg tggcagtagt aaattttcag cgttccggtc acgacccctt
      841 tctcccacaa tgggatcacc agcatggaat gaatctctgg tgtgcggtgg gcttcatcat
      901 tgtttttaat gatgattttt ccgtaattca tcgcctgacg ggtagtcggg ctaatgaagt
      961 catcgccatt ctgatagtta tgttcaccca cgccaacata ggccagcaca tgatcggtat
     1021 tagtaatcgc caccgcatcg gcgtgaatgt catcgcggat aatttcgcag accttgcgta
     1081 atgactcgct attgacatgg cgaaacagcg gtagcgtttt gttggcgata tccagcgcca
     1141 gcttggcctg ccgcgcggcg ctggcctctt tttcgccctc aacgctttgc accagaagca
     1201 caataaagcc gatacagacg ctaccgagga tcattggaat gccgatttta gagacgatat
     1261 cgatccccaa cgcggtagtt ggtgcccaga caattaccag aatcatggtc aacgtctcac
     1321 acaacatgcc gccgagaata ccgacgcgcc agcgctgtgc tttggggatt ttcaggttta
     1381 tccagcctga tatacaaccc gccagaatgc tggtgataaa gcaggggatc gccgtcacgc
     1441 cgccgatatc aattaaatac cggtgaatac ccgcaatcac gccggtaatg atgcctaccc
     1501 acgggccaaa cagaatcccg ccggacatca ccgcgataat acgtacgttc accagcgagc
     1561 tttctacggg aacgccggac caggtgctga acagggcgaa cagcgagaaa atggcggtaa
     1621 cggcgagcaa ttcttttggg gagtgcgccg acttgtgcaa cagttcgcga aacaggcgga
     1681 tacggatgag aaagaacagg cagataagca ttaacgctgc ccgatcgaag accgccagca
     1741 gcatgttgaa tatttcgtgc acgggtgact ctgaataagg attaaacctc tatgataggt
     1801 aacctgaagg ctgatgacca gcaggccttt tttgaggaaa aaccacaatt ttaaaagggg
     1861 attgaaagat aaatggtgta ttagcaatgc atctcttgat aatgcacatc tggctggtaa
     1921 atttattgaa attataatgt taataaaatg agtggtaatt ttcttgttag cgtagataaa
     1981 tttcctgttt ttgaagtgga gttccttatt taacgtcatt aataaaaatg ttctaaaacg
     2041 ctggacagac agaaattaat caggctattt tcaaaacagc caccatcgtg gcagcgtcgc
     2101 tcggacggtc cgggcgctaa cgttaatctg aggaaattat ggctgacact cgccctgaac
     2161 gtcgctttac gcgtattgat cgtctcccgc cctacgtttt taacattacc gctgaactga
     2221 aaatggctgc gcgtcggcgc ggcgaagata ttatcgattt cagcatgggt aacccggacg
     2281 gtgcgactcc gccgcatatc gtcgaaaaat tatgtactgt agcccagcgc ccggacacgc
     2341 atggttactc cacttcacgc ggcattccgc ggctacgtcg cgccatttcc cgctggtatc
     2401 aggatcgcta cgacgttgaa atcgacccgg aatcagaagc catcgtcact attggttcga
     2461 aagagggcct ggcgcatctg atgctggcga cgctggatca tggtgacacg gtgctggtgc
     2521 cgaatccaag ctacccgatt catatttacg gcgcggtgat tgccggggcg caggtacgct
     2581 cagtgccgct ggtggaaggt gtcgatttct tcaacgaact ggaacgtgcc attcgtgaaa
     2641 gttatccgaa accgaagatg atgatcctcg gcttcccgtc gaacccaacc gcgcaatgcg
     2701 tggaactgga gttcttcgaa aaagtagtgg cgctggcgaa acgctacgat gtgctggtgg
     2761 tccatgacct ggcctatgca gatatcgtct acgatggctg gaaagcgccg tcaatcatgc
     2821 aggtgccggg tgcacgcgat gtggcggtcg agttctttac gctgtcgaaa agctacaaca
     2881 tggcgggctg gcgtatcggc tttatggttg gcaacaaaac gctggtcagc gtcctggcac
     2941 gtattaaaag ctatcacgat tacggcacct ttacgccgtt gcaggtggcg gcgattgcgg
     3001 cactcgaggg cgatcaacag tgcgtgcgcg acattgccga acagtacaaa cgccgccgtg
     3061 atgtattggt taaagggctg catgaagcgg gctggatggt cgaaatgccg aaggcttcga
     3121 tgtatgtctg ggcgaaaatc ccggaaccgt atgctgccat gggctcgctg gaatttgcca
     3181 agaaattgct taacgaagcg aaggtctgtg tctctccagg gattggcttt ggcgactacg
     3241 gcgacacgca tgtgcgcttt gcgctgattg aaaaccgcga ccgtattcgt caggccatca
     3301 gagggattaa agcgatgttc cgtgccgacg gtttactacc cgccagcagc aaacatattc
     3361 acgaaaacgc ggaataacgc cttcgccaga aatgcaaaca ggagcctgat ggctcctgtt
     3421 tttcattgca cagtttgctt ttagatcatc agggcaaaag taccggccca cacgatgacc
     3481 ataaaagaaa tgcccataaa gaaatatttc actttacatc tctccgcgta attactgtta
     3541 cgcctgaatg acttcatcac acctgataca gtgagttgac accgggcaaa acgaccttaa
     3601 aagttctgta ttttaccgtg ggcatcaccc cagaattctg agctaaactg ctccagacgg
     3661 cgctaatgta cgcctaaaac tgaaacgaga caagaggcat tttcttattt acttttagta
     3721 acttacaggt gtctcatatc ggcgacagtt taatttctga cggtaataat tagagattca
     3781 gcgaaggaaa aaaccttaag aaaaaagcca taaaaaccat gaggttatta tggctgattt
     3841 gaggagggaa agagtaatgg cagtttgtta aatgtataac gacgattctc ccaccgggcg
     3901 cgttttaaag cgacggtgga tccagaggta ctgctccggt gcgcgcatga tctctttctc
     3961 gataatcttg ttcatatagg cagcggcttg attttcatct gccgggtagc cttccatctc
     4021 tggggtgatg tacaaacgat atccgctgta atccgctttt cttaccatcg ttacggtcaa
     4081 catggctgcg ccagagagac gggagagaac ataggtgcca ttggttgtgg cgacattttc
     4141 caccgcaaag aacggcgcga aggagctgcc tttacgacca taatcctgat cgggagcaaa
     4201 ccataccgct tcacctttct tcagtgcacc gacaatgccg cgcagattat ttctgccgat
     4261 catcgctttg ttagagcgca tgcgaccacg ggtctgcacc cattccatca gctgattatt
     4321 atgtggacga taggtggcca tcattggctg acaaagtccc atcacgcggc cgcccagttc
     4381 cagcgacata aaatggacgc cgacaaccat tacgccgcga ttttgcattt gtgcgcgttt
     4441 aaggttatcc agtccttcaa catcaaacca tttacgtacg cgactgtcgg gccagaacca
     4501 cgccatgccg gtttctacca gcgccatgcc gagtgaacga aagttttcgg caatcatctt
     4561 ctcgcgctct tcagcagaat gctgcgggaa acaaagttcc aggtttttac gggcgataga
     4621 ttcacgccgt ttcaggaatg gtcgcgccat tgcgccaata cgcgtgccga gaaagcatag
     4681 aacaggataa ggaagctgta cccaaagcca gagtacacca agtccaaacc atgtgagcca
     4741 gtagcgagga tgtagaaact cgcgggaaaa tttgcattgt ggaaacatag ttaccttctg
     4801 tagatacgaa ttgttgtatc gcagaagatt tcatgtcgac agcggtacac tcaattggtt
     4861 gggccatcat gtacgacaat ggttcctgta aagagtgtaa agactagtca ggacataacc
     4921 acgaggagca tgaatgcggt ggctctactt tatcactggc tgactgcttt cagctactga
     4981 ttattaatcg tgcaaagtaa aaaattttcc gcacgcaata gcgttgcatt taacgtgctg
     5041 ttttcattga tgcttagcaa aaattgccag aggttaagga ttgtcttact attaaagtga
     5101 ctgaagttac aggtttttta gcgcggcagg aggttgagct atgatttatt tatggatgtt
     5161 tctcgccctg tgtattgtct gcgtaagcgg ctacattggt caggtactga acgtggtatc
     5221 ggcggtctct tctttcttcg gcatggtgat cctcgctgca ctcatttact acttcaccat
     5281 gtggttaact ggcggtaatg aactagtgac ggggatattt atgtttcttg ccccggcttg
     5341 tggcttgatg attcgcttta tggtggggta tggcaggcga tagtgggtca ggatggctca
     5401 tttgggcagg tgttcacatc agcatcaggc atgattgttc acctgccatg tgacagacgc
     5461 tatcgcacag gatgaataag ataattcgcc tttgtcggat aagtaggcgt gatttcttct
     5521 gtgaggttta atggtggcgc atcttctctc atcttaaaca aaatcgcctg tgatggctga
     5581 agttttgtag agtgtgtggt cgtcatcgct gatgttttct cagtctcttt atagctcctc
     5641 tcacttccac caccagaaat agaaaatgca aaaacattgc atgccataat agacaccaat
     5701 aaaaataagc tgaaaagtat taagtttact ttcatagaaa gttatcctga aaatggttca
     5761 ctgagaacct acgatgttat ggctgtattt acatttaatt aatcagtatt tacatcgata
     5821 taataagtga catatctttg tggtatataa gaatagttct ctgcgacagg aagcagattc
     5881 ctacaattgt aagactaaaa tacttcttgc gataataact acaactgtaa gataaccctt
     5941 tcaaaatgac cgttgctctc tgatttctca tttcatgctc acccaatatg atggcggagt
     6001 tttctaaaac tgttaaagaa tgaggtaagt atgaaacgtt taattatggc tacgatggtc
     6061 acagcaattc tggcatcttc aactgtatgg gctgctgata atgcaccggt agcggcacaa
     6121 cagcaaactc agcaagttca gcaaacccag aaaacggcag cagcagagcg tatctctgaa
     6181 caaggtttat atgcgatgcg tgacgtgcag gtagcgcgcc tggctctgtt tcatggcgat
     6241 ccggaaaagg caaaagaact gaccaatgaa gcttcagctt tgttgtcaga tgacagtacc
     6301 gaatgggcaa agttcgctaa gccaggtaaa aagaccaatc tcaatgatga ccaatatatt
     6361 gtcattaatg catctgtcgg aatttctgag agttatgtag caacacccga aaaagaagcc
     6421 gcgataaaaa ttgccaatga aaaaatggcg aaaggggata aaaagggcgc aatggaagag
     6481 cttcgcctgg ccggtgttgg tgtaatggaa aaccaatatc tgatgccgct taaacagact
     6541 cgtaatgcac ttgctgatgc gcagaaactg cttgataaaa agcaatacta cgaggcaaac
     6601 ctggcgctta aaggtgcgga agatggaatc atcgtcgata gcgaagcact gtttgtgaac
     6661 taatgctgac aggcagtata ttgaggtaaa ggatttaact ccctccagcc gacaattttt
     6721 tatgaccaca atacgacagg ttgtggtcat aaaattattt ggcgctcgcg gttctataaa
     6781 cacgcatttt attttcctca aagtaaaccg caataatccc gtgtcatcac aaatcattta
     6841 ttatgttatg ctttatggta cgctttaaaa agcgtaatca tactcttact tgtaaatcac
     6901 cggcgcttct tacagttgta agaataacat cacaaatgtc gcgactctct ctgattacca
     6961 cgaatcaata tttatcatat tcttcttttc gtcctcacta cttaccatgc agaaaggaat
     7021 tggaagtggc gatgaaataa ttttcaatac ttgatacagg aatttaaaaa tatcgagtgc
     7081 cgctacgacg atattttgcg gattatttat agagggcgtt atgccttaaa taaacgcaaa
     7141 attaacacat atttaattaa ctaataggta ttgctatgtc aactcccctt caaggaatta
     7201 aagttctcga tttcaccggt gtgcaatctg gcccatcttg tactcagatg ctggcctggt
     7261 ttggcgctga cgttattaaa attgaacgtc ccggcgttgg tgacgtaacg cgtcaccagc
     7321 tgcgagatat tcctgatatc gatgcgcttt acttcaccat gcttaacagt aacaaacgtt
     7381 ctattgaatt aaataccaaa acagcggaag gcaaagaggt aatggaaaag ctgatccgcg
     7441 aagctgatat cttagtcgag aactttcatc caggggccat tgatcacatg ggcttcacct
     7501 gggagcatat tcaagaaatt aatccacgtc tgatttttgg ttcgatcaaa gggtttgatg
     7561 agtgttcgcc ttatgtgaat gtaaaagctt atgaaaacgt tgctcaggca gcgggtggcg
     7621 cggcatccac tacgggtttt tgggacggtc cgccgctggt aagcgctgca gcgttgggag
     7681 acagcaacac cggaatgcat ttgctgatcg gtttacttgc tgctttgctg catcgcgaaa
     7741 aaacggggcg tgggcaacga gtcaccatgt caatgcagga tgccgtattg aacctttgcc
     7801 gcgtgaaatt acgtgaccag cagcgtctcg ataaattggg ttatctggaa gaatacccgc
     7861 agtatccgaa tggtacattt ggtgatgcag ttccccgtgg tggtaatgcg ggtggtggcg
     7921 gtcagcctgg ctggatcctg aaatgtaagg gctgggaaac agatcctaac gcctatattt
     7981 atttcactat tcaggagcaa aactgggaaa acacctgtaa agccatcggc aaaccagatt
     8041 ggattaccga tccggcatac agtacagccc atgcccgaca gccacatatt ttcgatattt
     8101 ttgctgaaat cgaaaaatac actgtcacta ttgataaaca tgaagcggtg gcctatttga
     8161 ctcaatttga tattccttgt gcaccggttt taagtatgaa agaaatttca cttgatccct
     8221 ctttgcgcca aagtggcagt gttgtcgaag tggaacaacc gttgcgtgga aaatatctga
     8281 ccgttggttg tccaatgaaa ttctctgcct ttacgccgga tattaaagct gcgccgctat
     8341 taggtgaaca taccgctgct gtattgcagg agctgggtta tagcgacgat gaaattgctg
     8401 caatgaagca aaaccacgcc atctgatatt aacgggggct tctggctccc aatttataaa
     8461 aatttcgagg ttattaatca tgtcagatca acttcaaatg acagatggta tgcatatcat
     8521 cgttgaagca ttaaaacaga ataatattga cactatttat ggtgttgtag gtattcctgt
     8581 gacggatatg gcacgccatg cccaggcgga aggcattcgt tatattggtt ttcgtcatga
     8641 gcagtcggca ggctatgccg ctgcggcaag cggttttctt acccaaaaac cggggatctg
     8701 cctgacagtt tctgcgccag gattcctcaa tggtttgacc gcattggcca acgcaacggt
     8761 aaatggtttt ccgatgatca tgattagcgg ctccagcgac cgcgcgatcg tcgacctaca
     8821 gcaaggtgat tatgaagagc tggaccaaat gaatgcggca aaaccgtatg ccaaagcagc
     8881 atttcgcgtt aatcagccgc aggatcttgg cattgcattg gcacgcgcta tccgggcctc
     8941 agtatcgggt cgccctggcg gagtttatct tgatttgcca gcaaatgtcc tggccgcgac
     9001 gatggaaaaa gacgaagcgt taaccacgat tgttaaagtt gaaaatccgt cgccagcatt
     9061 attgccatgc ccgaagtcag tcactagcgc aatttcgctt ttagcaaaag ctgaacggcc
     9121 attaattatc cttggcaaag gcgcggcgta ttcacaagct gatgaacagc ttcgtgaatt
     9181 tattgaaagt gctcagattc cattcctgcc aatgtctatg gcgaaaggga tccttgaaga
     9241 tacgcatcca ctttctgcgg caactgcgcg ttcgtttgcc ttggcaaatg ctgacgttgt
     9301 catgcttgtt ggtgcacgac tgaattggtt attggcacac ggtaaaaaag gatgggcggc
     9361 agatgcacag tttattcaac tggatattga accgcaggaa attgacagca accgccccat
     9421 tgctgtgcca gtcgttggtg atattgcatc cagtatgcaa ggtatgctgg cagaactgaa
     9481 acaaaacaca tttacgactc cactggtatg gcgcgatatt ttaaatatcc acaagcagca
     9541 aaatgcacaa aaaatgcatg aaaaattaag tacagatact caaccattaa attactttaa
     9601 tgcattaagt gctgtgcgcg acgtattgcg cgagaaccag gatatttatt tagttaatga
     9661 aggtgcaaat accctggata atgcacgaaa tattattgat atgtataaac cacgtcgtcg
     9721 tctggattgt ggtacctggg gtgtcatggg catcggtatg ggctatgcca tcggtgctag
     9781 cgtgacttct ggttctccgg ttgtcgccat tgaaggtgat agtgcttttg gtttcagtgg
     9841 gatggaaatt gaaacgattt gtcgatataa cctgccggtg acgatcgtta tttttaataa
     9901 tggcggcatc tacagaggag acggtgttga tctcagtggc gctggtgcac catcaccaac
     9961 ggatctgttg caccatgcaa ggtatgacaa attaatggat gcatttcgtg gcgttggcta
    10021 taacgtcacc acgacagatg aacttcgtca tgctttaacc accggtattc agtcgcgcaa
    10081 accgaccatt attaatgtgg tcatcgaccc tgcagcagga actgaaagtg gccatattac
    10141 caaacttaac ccaaaacaag tcgctggtaa ttaaatactg acatcgtctc ctcttgccaa
    10201 ctcattatgc gatggtgagg ggacccttat cggaaatact attatgctaa cattttttat
    10261 tggcgattta ttgcctatta tcgtaatcat gctgttgggt tattttagcg gcagacgaga
    10321 aactttttca gaagatcaag cccgcgcatt taataaactg gtattaaact acgctcttcc
    10381 tgcggcttta tttgtttcta ttacccgggc aaacagggaa atgatttttg cggacactcg
    10441 tctgaccctt gtatcacttg tggttattgt cggatgtttc tttttctcct ggtttggttg
    10501 ctacaaattt tttaaacgta cccatgcaga agcagctgta tgtgcattaa ttgcgggttc
    10561 acctaccatt ggattcctgg ggtttgcagt tctcgatcct atttatggtg attccgtatc
    10621 aacaggttta gtggtagcaa ttatttctat tattgttaac gcaattacta ttcctattgg
    10681 tctgtatttg ctgaatcctt cctcaggagc ggatggtaag aagaatagta atctgagcgc
    10741 attaatttct gcggcaaagg agccagtagt atgggcacct gttctggcaa cgatcctggt
    10801 gctggttggg gtaaaaattc cggcagcatg ggacccaacc tttaatctga ttgcgaaggc
    10861 taactcaggg gtagcggtat tcgctgcggg gttgactctg gctgcacata aattcgagtt
    10921 cagtgccgaa attgcttata acaccttcct gaagttgatt ctgatgccac tggcgctgct
    10981 tctcgttggt atggcatgtc atttgaacag cgaacatttg cagatgatgg tactggcagg
    11041 cgcattaccg ccggcattct ccggaatcat tattgccagc cggtttaatg tctacacccg
    11101 cactggtaca gcgtcattgg ctgtgagcgt actggggttt gtcgtcacgg ctcccttgtg
    11161 gatttatgtc agtcgactgg tttcataatt aatcatgtta ttgattttac ataaatgccg
    11221 aagtgtcttt tcaccttcgg cttttttcaa ggcataagca aatgacaaat aatgaaagca
    11281 aagggccgtt tgaaggctta ttaattatcg atatgactca tgtccttaat gggcctttcg
    11341 gaactcaact tctttgtaat atgggcgcaa gggtaattaa agttgagccg ccgcgtcatg
    11401 gtgatgatac ccgcacattt ggtccctatg tggatggaca gtcactctat tacagtttta
    11461 ttaatcatgg caaagagagt gtggttcttg atttaaagaa tgatcacgat aaaagtatat
    11521 ttataaatat gctcaaacaa gctgatgtat tagctgagaa ttttcgccca ggtacaatgg
    11581 aaaaactggg gttttcatgg gaaaggttac aagaaatcaa cccgcgcctc atatatgctt
    11641 catcgtcagg tttcggacat accggtccgc taaaagatgc tcctgcctac gataccatca
    11701 ttcaggcaat gagtgggata atgatggaaa cagggtaccc tgatgctccg ccagtgcgtg
    11761 ttggtacctc tcttgcggat ctatgcggcg gtgtctattt attcagcgga atagtgagtg
    11821 cactttatgg ccgcgaaaag agccagagag gggcgcatgt cgatatagcg atgtttgatg
    11881 ccacgctgag ttttctggag catggtttga tggcatatat tgcgacaggg aagtcaccac
    11941 aacgcctggg aaatcgccat ccctacatgg caccttttga tgttttcgat actcaggata
    12001 agtcgattac gatttgttgt ggtaatgaca agcttttttc tgcg
//
LOCUS       DAJVTL010000125        11944 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.127, whole genome shotgun sequence.
ACCESSION   DAJVTL010000125 DAJVTL010000000
VERSION     DAJVTL010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11944
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.127"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..208)
                     /locus_tag="OQQ26_003414"
     CDS             complement(<1..208)
                     /locus_tag="OQQ26_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001145249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858759.1"
                     /translation="MPVRLNTIPDAEPYPAPPARIKWLSALLLMLSVGVAITSLFSSD
                     ELAKNGPHFWGLACGVPAFIWSLVR"
     gene            complement(463..1377)
                     /locus_tag="OQQ26_003415"
     CDS             complement(463..1377)
                     /locus_tag="OQQ26_003415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001298128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858760.1"
                     /translation="MFLTNTSRFLFLFLMHKNKLYAYDNFSFNADVHYGYGKLLWHDK
                     KPVIYPLASLSDYTYYNESDPFETIYYVEQYYKISLNESKRIQEQKDIYAHLQLKHNK
                     SLITANVTLHNKSNSSYYVHRMNLPANIHELPYSPLCSGSFLIVTNNIRLDYIRKITC
                     RFDLWIKKSDWIEISPGEKLSYTVNLNDYYAFLPAMHQYDIGTVEFTLVNSNWFLEQH
                     IYDLFFAIVDERHYKQCKNTSGIVRKYIYKSWQLCETYRGRWSPLQELMNRFHYEGGS
                     ENIFQIRTNQENININGDKIKSLYSSMQ"
     gene            complement(1462..1977)
                     /locus_tag="OQQ26_003416"
     CDS             complement(1462..1977)
                     /locus_tag="OQQ26_003416"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858761.1"
                     /translation="MPSEKIITIKFKLNGEVTKETKSARAVIQEAVDRMKMICDKLSA
                     DKGECREVTFRDRYLDSNDNYYDKDVTKWKCGNFVNSTDNDAYTANVTPDHIIGVSPD
                     KYVDVVTIRIGQRFVCKPMTGKDSKVSSLCHELTHLVRYGPKGMYGGMQSEDMTLFEN
                     AYNIERYFEID"
     gene            complement(1959..2174)
                     /locus_tag="OQQ26_003417"
     CDS             complement(1959..2174)
                     /locus_tag="OQQ26_003417"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858762.1"
                     /translation="MSNDRGSSSGENQKTEQCIQEFQVTNQFKKMMKESLEEQKKVID
                     KRVETLTHWNDEAERNSGGYLACHLKK"
     gene            complement(2167..4676)
                     /gene="vgrG"
                     /locus_tag="OQQ26_003418"
                     /pseudo
     CDS             complement(2167..4676)
                     /gene="vgrG"
                     /locus_tag="OQQ26_003418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001553372.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
     gene            complement(4688..7333)
                     /gene="tssH"
                     /locus_tag="OQQ26_003419"
     CDS             complement(4688..7333)
                     /gene="tssH"
                     /locus_tag="OQQ26_003419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000147335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ATPase TssH"
                     /protein_id="HCS1858763.1"
                     /translation="MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLK
                     LLEQGEGDITVIARLYEWDIDTLWQSLLAHLDTLPRSVRERPQLSEPLTALIRQAWLI
                     ASLEGDDPQIRSQHLLMALTEKPMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPA
                     RQPQVTETLTSAQPEAATTDAPAKTLTGKQDDALLAVLNRFTEDVTEKARSGRIDPVF
                     GRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRITEGNVPDSLKTVHIRT
                     LDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEAHTIIGAGNQAGGADAAN
                     LLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKA
                     RYAQHHGVHMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGARVRMSLDTLPEPLT
                     QLHARLAALDIEREAIEQDSVFYPEASPERLAELTDLRDELQAEAGHLEAQYQQEKAL
                     AQQIMTLRQEGTDSTELQQQLRTHQGFAPLLALDVDARAVATVVADWTGIPLSSLLRD
                     EQSDLLSMEQSLENRVVGQRPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKT
                     ETALTLADTLFGGEKSLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGVLTEAVRKRP
                     YSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTANLGSDHIMQL
                     LEEKPDATDADLHELLYPLLRDHFQPALMARFQTVIYRPLGQEAMRAIVEMKLAQVVR
                     RLRQHYGLETEINDSLYDALTAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAAHH
                     KPAQLRLGWDEEDGIVLELDRAERQ"
     gene            complement(7524..8015)
                     /locus_tag="OQQ26_003420"
     CDS             complement(7524..8015)
                     /locus_tag="OQQ26_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hcp family type VI secretion system effector"
                     /protein_id="HCS1858764.1"
                     /translation="MAIPAYLWLKDDGGADIKGSVDVQGREGSIEVVALDHDVYIPTD
                     NNTGKLTGTRTHKPFTFTKEIDASSPYLYKAVTTGQTLKTAEFKFYRINDAGQEVEYF
                     NTRLDNVKLVRVTPLMHDIKEPSKEKHNHLERIEFRYEKITWTYKDGNIIHSDSWNER
                     PSA"
     gene            complement(8070..9722)
                     /locus_tag="OQQ26_003421"
     CDS             complement(8070..9722)
                     /locus_tag="OQQ26_003421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001246525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HCS1858765.1"
                     /translation="MRNTLKQAVVLWGMVLLLVLWSVFISPSGVLIWAGVAAIVLTVA
                     ALLIYRRRQAWREMTGDAGLSSLPPETYRQPVVLVCGDMSAHLFTDSPIRQVSEGLYL
                     HVSDEEQLVAQAERLLTLRPAWASQLAVAYTVMPGMYRDAAVLTGQLRRFAHSMATVR
                     RRAGVNVPWLLWSGLSGSPLPEKAHSPWLICTGGEIQVATSAETASPAQWLTQTSTQE
                     RSQPLCYLLKAESLMQWLNLNVLAALNGPEAKCPPLAMAVGLPPSLPAVDNNLWQSWI
                     TARTGLTTDIADTGIDATLPFPDALLRRLPRQSGFTPLRRACVTMLGITTVAGIAALC
                     LSATANRQLLRHIGDDLHQFYAVPAEEFITKARRLSVLKDDAVMLDGYYREGEPLRLG
                     LGLYPGEHIRQPVLRAIHDWRPPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGST
                     KVLVDALVNIRAKPGWLILVAGYTDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATC
                     FAVQGLGESQPAATNDTPQGRAVNRRVEISLVPRSDACQDVK"
     gene            complement(9735..10400)
                     /gene="tssL"
                     /locus_tag="OQQ26_003422"
     CDS             complement(9735..10400)
                     /gene="tssL"
                     /locus_tag="OQQ26_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssL, short
                     form"
                     /protein_id="HCS1858766.1"
                     /translation="MKKETDINIDALLRDTFLTVVELRQGTTVRHGMELYRHCQQQVE
                     GVRERLKDAGFSQESVEHITYAQCALLDETVLSRGGMDDGQAIWMKNPLQSHFFNTLQ
                     AGELLYERMKQVLHEPAPAQAVLTCFHRVLLLGFRGRYQDPVAPARDQLISTLNGLVA
                     PFGVLPETAVLNVPLSTRQHPLLHSPFFWLVTLTLLLAGVWWGLHHWLNVLVDELLPQ
                     SLR"
     gene            complement(10397..11723)
                     /gene="tssK"
                     /locus_tag="OQQ26_003423"
                     /pseudo
     CDS             complement(10397..11723)
                     /gene="tssK"
                     /locus_tag="OQQ26_003423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020238917.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
     gene            complement(11741..>11944)
                     /locus_tag="OQQ26_003424"
     CDS             complement(11741..>11944)
                     /locus_tag="OQQ26_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HCS1858767.1"
                     /translation="RTLVTEMTDPGDELQASHPLRDGKVIVEDIEDNPGFFRVRLFAV
                     PHFQIEGMDINLSLVSQMPKAKA"
BASE COUNT         2579 a         3339 c         3070 g         2956 t
ORIGIN      
        1 gtctaaccag cgaccagata aaggcaggca caccacaggc cagtccccag aaatgcgggc
       61 cgttttttgc cagttcatcg ctggagaata atgaggttat tgccacacca acagacagca
      121 tcagtaataa ggctgacagc catttaatgc gggctggcgg tgcgggatag ggttcagcat
      181 caggaatagt gttaagtcga acgggcattg taataatcca ttattctgaa atataaatgt
      241 aatgaatatc aggatgttta aactatgtaa gtaattcact accaacttag gtgcgcacta
      301 attaaaatac atcttgcttt ttatacggaa atatcatttg aagcttaatt taaaacatgc
      361 gaattcttaa attctttcag tgttgttatt aatgtttttg agaggaatgt gttttatatt
      421 ccttgcatgc atgtttaata aatataccca caaaaattaa gctcactgca tcgatgaata
      481 aagagattta attttatctc cattaatgtt tatattttct tgatttgttc ttatttgaaa
      541 tatattttca ctccctcctt cataatgaaa tcgattcatg agttcctgta aagggctcca
      601 cctcccacga taagtctcac ataactgcca cgacttatag atatacttcc taacaatgcc
      661 agaagtgttt ttacactgct tatagtgtct ttcatccaca atagcaaaaa aaagatcata
      721 aatatgctgt tctaagaacc aattactatt taccaatgtg aactctacag ttcctatatc
      781 atattgatgc atcgcaggga gaaaagcata atagtcattc aaatttactg tgtatgagag
      841 tttttctccg ggtgatattt ctatccagtc agattttttt atccacaaat caaatcggca
      901 tgtaattttt cttatataat ctaaccgtat gttatttgtt acgattaaaa aagaaccact
      961 gcacaaagga gagtaaggta attcatggat gtttgctggt aaattcatcc gatgaacata
     1021 atacgaacta ttacttttat tatgtaacgt tacatttgct gtaattaatg atttattatg
     1081 ttttaattga aggtgtgcgt aaatgtcctt ttgttcttga attcgcttac tctcatttaa
     1141 gctaatttta tagtattgct ccacataata aatcgtttca aatgggtcgg attcgttata
     1201 ataagtataa tcagataagg atgccaatgg gtatatgact ggttttttat catgccataa
     1261 tagcttacca taaccataat gtacatccgc attgaatgag aaattatcat atgcatataa
     1321 tttattcttg tgcataagaa ataaaaataa aaaacgcgat gtatttgtta agaacataga
     1381 tacactcact tatgtcaagc ttaacgataa atttataatt acatataata aacgataaga
     1441 ttagcaaatg gatatgagta attaatctat ttcaaaataa cgttcaatat tatatgcatt
     1501 ttcaaagagt gtcatatcct ctgattgcat accgccatac atacctttgg ggccatatct
     1561 gactaaatgt gttaattcat ggcaaagtga tgaaacttta gaatcctttc ctgtcattgg
     1621 tttacataca aaccgctggc ctattcttat tgtcactaca tctacatatt tgtctggaga
     1681 aacacctata atatgatcag gggtgacgtt agcagtataa gcatcattgt ccgtagaatt
     1741 tacaaaattg ccacacttcc acttagtaac atctttatca tagtaattat cattactatc
     1801 aagatatcta tccctaaaag taacttctct gcactcccct ttatcagcag ataatttatc
     1861 acatatcatt ttcattctgt ccacggcttc ttgaataact gctcgcgcac tttttgtttc
     1921 ttttgttact tctccgttca gtttaaattt tatggttatt attttttcag atggcacgcc
     1981 aaatatcctc ctgaattcct ctctgcttca tcattccagt gcgttaacgt ttctaccctt
     2041 ttatcaatta cctttttttg ttcctctaga gattccttca tcattttctt gaattgattc
     2101 gtaacttgaa attcctgtat gcattgttca gttttctgat tttcaccact tgaactacct
     2161 ctatcattac tcatgcacgc ctcccaatat catgtctata ttttgattca ataatctgac
     2221 atcaattgtt tgtttggaat cagtattaaa attttctgta tacccattct catcagtaat
     2281 accttctttt tgagtgccat cagaaaaaca tgcaatatat tttgtgttgg cataaggtag
     2341 accatcatca tcagtaaaaa ggaacttagc attaaattcc ccgctctcaa tcactggaaa
     2401 cgccatcagt tccggcgtca gcttcgcctt cggcttacgc ccgtaatatc cggccttaac
     2461 gttatattct cccggcgttc ccgcttctat cccgcaggca tccagccgga tgtagctgcc
     2521 accgccgtta agggtgattt tcttcttcgc ggtgatcttg atctcatctt ccgtactggt
     2581 gatcactatc gatttctgtg ccaacagttc catcagatcg ttctgtgcct gtaccgagat
     2641 cgcccccttg ttggcaaaca gcttgatgcc cgctttacgc acaaacacgc ttagcgcctg
     2701 tcccacgccg ataaacatat ttttcaccac gccgacatcg gcgttgttgc ctgcgttggc
     2761 tatcacattc tttgccgccg ccagttgcag gtgctctccg ctggcgatcg ccataccctt
     2821 gggtgcgctt agcaggatcg ccgcctgcgt cagatctttt acactctgct gcaacagcgc
     2881 tatctgtgat gatagatctg ccggatcggc attcgccgtc tgcgcatcag tggacagcga
     2941 cttcatctgt gactgtgcgc catccagtat tgccattgcc ggagccattt cgcgcacctg
     3001 accctgcgcc ttgtcctgcg catcggcgct gataaatatc cctttcttag cccgtactgc
     3061 accccacaga tcggttcgca gttcaaagcc ttcaccgcgc tgctgtttcc cggcatccac
     3121 cagatgaccg aggtttagct ggctcttgcc gccgtactcg gtactgacct tgatatgctc
     3181 tttgccgcgc tcatcgtcga ggcggatttt gttgttcgcc ggggttctga ggacgttacg
     3241 cttatagttc tgaatggtca catggtcagt gtgtgccgag tcgtgtttta cgcctgcaat
     3301 ataaggtcgg tccgggttgc cttcctcaaa ggcgatactc acttccgttc ctgccagcag
     3361 cggcaggtgc aggccgtagg tgtctcccgc atacgggcgc gactggcgta cccacaggct
     3421 ttcgtagccc ggcttccacg tatcacggtc aaagtcgaga ttgacccggt agcgcccgtc
     3481 cttatcgata tgggcgtaga tgtcgttctt caccgtactg gtgacccgcg ccgggagcgt
     3541 gccggccatt accgggcggg ggataagcgc cgggcggtag ccgtagcgtt ctgagtacgg
     3601 gatgaccgta aacgtcagct catagctgcg gtcacgcgcc gcgcaggccg tcacgccggt
     3661 aatcagtacg cccttgcgaa ataccgcagg cgcgtcgtcg ctctggacct ttatctccag
     3721 ccccggcgtc agcagtgaac tggtgctctg gccctgcaga atgacctgtt cattcaggta
     3781 gcgttcgtgg cggatacggg cataaaacgc gccgctttcc gctgcctctt gatcgccttt
     3841 ttgcaggaag ttgtcggcgt agtggtaggc ttcgccgtag gtggtgttat cgcccccggt
     3901 ggcgtcatgc tgctcagtca tcatctccgc tgtggcggtg cggtagttgt agtcccgcgt
     3961 ggtgacgctt ttttccacca cgctgtatgc ggtgttcagc ccccatacgg cttccgtttc
     4021 accatcaaac agccctgaag gatgacgaag cggcagcgtc agtccgcgct catagccgct
     4081 ctggtcgtcg taaaattcaa taacctcgat tttcagccgc gcgtcagtgg cgaagcgaaa
     4141 ccagataccc acttccgaca gcaggcgtga aataaacgtc aggtcgtcct cgccatactg
     4201 catcacctgt tcgcgggccg ggtattcgct tttgaggtta aacacgaagt cctgaccgcg
     4261 catctggtgc cgctcgcgca ggattttttc gacgatttgt ggcaccgtca gattctggta
     4321 gatggcattc tggcggctgc gggccagcag cgccatacgg ggttcaagac gtacttcgta
     4381 acggcttcat cctgtgacga tgacaggtgt ttaaagccgg tgatgacccc gtacagggtg
     4441 cgcagggggg cctgcaccgg cattccctgt accggcggtg ccgtcaggct gaatgcgccg
     4501 tcctgcatca gcaccaactc cggcgtgatg gctttatcgg tactggtaaa ctgaatgtcg
     4561 tagcggaacg gggtactcag ttgttcgcgg ccttcgaagg tcagcacatc caccggactt
     4621 tgcaggccgc ggattttgag tttgtggtgt gaatggtcga aattctgaat acccataaaa
     4681 gcctccgtta ttgcctctct gccctgtcta attccagtac aatcccgtct tcctcatccc
     4741 agccaagccg tagttgggct ggcttatggt gcgcggcctg ctgtgccagc aactgctggc
     4801 ttaagaccgg caggatttgc tggttcagca ggctgtcgat attacgcgca ccggtgtccg
     4861 gcagcaggca ggcggcggtc agcgcgtcgt acaggctgtc gttgatttcc gtttccagcc
     4921 catagtgctg acgaagacga cgaaccacct gcgccagttt catttccaca atggcgcgca
     4981 tcgcttcctg tcccagcggg cggtaaatca ccgtctgaaa acgcgccatc agtgcaggct
     5041 ggaagtggtc gcgcagcaga gggtacagca gttcatgcag gtctgcgtcc gtggcgtccg
     5101 gtttttcctc cagcagctgc atgatgtggt cgctgcccag attagccgtc atcagaatca
     5161 cggtgttgcg gaagtcaatt tcccgccctt cgccgtcgcg cataaagccc cggtcaaata
     5221 cctgatagaa caggttcatt acatcgcggt gcgccttttc cacttcgtcg agcagcacca
     5281 cgctgtaagg gcgtttgcga acggcttcgg tgagtacgcc gccctgaccg taaccaacgt
     5341 agcccggagg cgaacctttc aattgggaaa cagtatgcgg ttcctgatat tccgaaagat
     5401 taatggtgat aagagatttt tcaccaccga acagagtgtc ggccagtgtg agcgcagttt
     5461 cggttttacc ggtgccgctg gggccggtca acaggaatac cccctgtggg ccattctccg
     5521 gcgtgagacc tgttttagcc gcccgcagcc gctgtgcgat ggcgcagagc gccgggcgtt
     5581 gcccgacaac gcggttttca aggctttgtt ccatgctgag caggtcgctc tgttcgtccc
     5641 tgagcaggga agagagcggg atgccggtcc agtccgccac caccgtggcg acggcgcggg
     5701 cgtccacatc cagcgccagc agcggtgcaa agccctgatg tgttcgcagt tgctgttgca
     5761 gttcagtgct gtctgtccct tcctgacgca acgtcataat ctgctgcgcc agtgcctttt
     5821 cctgctgata ctgcgcttcc agatgcccgg cttctgcctg tagctcatca cgcaaatcgg
     5881 tcagttccgc cagccgctcc gggctggctt cgggataaaa cacgctgtcc tgctcaatcg
     5941 cttcccgctc aatatccagc gccgccagtc gcgcatggag ctgcgtcaac ggttccggga
     6001 gagtgtcaag gctcatgcgg actcttgctc cggcggtatc cagcaaatca accgctttgt
     6061 ccggcagctg gcgtccggtc agatagcggc gcgacaggcg cacggcggtc tgaatggcgc
     6121 tgtccagcat atgcacgccg tggtgctgtg catagcgggc tttcagcccc ctgagcatca
     6181 ggcaggcggt gtcatcatcc ggctcgtcca ctttcaccat ctggaagcgg cgctccagcg
     6241 cggcgtcgcg ctcaaaatac tgtttgtatt cgctccacgt ggttgccgcg atggtgcgca
     6301 gttcgcccct tgccagcgcc ggtttcagca ggttcgccgc atccgcgccg cccgcctgat
     6361 tacccgcgcc gataatggta tgggcttcat caataaacag cagtaccggc tccggtgatt
     6421 tctgcactgc atcgatgaca tttttcagcc gctgttcaaa ttcaccttta acgcccgcgc
     6481 cagcctgtaa cagaccgagg tccagcgtgc ggatatgcac cgttttcagg ctgtccggca
     6541 cgttgccttc ggtgatacgc agcgccagcc cttccaccag cgcggttttg cccacccccg
     6601 gttctcccac cagaatcggg ttgtttttgc ggcgacggga gaggatatcg accatctggc
     6661 gaatttccgt gtcgcgcccg aataccgggt cgattcgccc gctgcgggct ttttccgtca
     6721 cgtcttcggt aaagcggtta agcaccgcca gcagggcgtc atcctgtttc cccgtcagcg
     6781 tttttgccgg tgcgtccgtc gttgccgcct ctggttgcgc ggatgtcagc gtttcggtga
     6841 cctgtggctg acgtgccgga cattcatctg actgcgcatc cagcagggga cgcagccgct
     6901 caagctgcac acggctcagg ctcagcaata cccacaggtc attacaggcg ggcagcatcg
     6961 gtttttctgt cagtgccatc agcagatgct gactgcggat ttgcgggtcg tcgccttcca
     7021 gcgaagcaat cagccacgcc tgtctgataa gcgccgtcag gggttcagaa agctgcggac
     7081 gttcgcggac cgagcggggt aaggtgtcca gatgtgccag cagagactgc cagagcgtgt
     7141 cgatatccca ttcatagagg cgggcaatca ccgtgatatc gccttctccc tgctccagca
     7201 gtttcagcag ccagtgttca atggttatct ccgcatgagc gcgggtctga cacagtgagg
     7261 cggcagcgtc cagcgcccgt gcacagtacg ggttaaggcg acgcagcagc gcggcggggt
     7321 gatttccggt catagaaggt ttccttatcg tgttctgtat tcctgcgatc tgcgttcagg
     7381 tacgctaccg cccatagccg ttacctcact caggcccatc aggtatcacc agattgtggg
     7441 tatgctttgc tcagtaccgg tgcctgcggc actgggcaaa ccacacaaca gaaaggcaga
     7501 cagtttcctg tctgccacgg ttatcaggcg gaaggacgtt cattccacga gtcggaatga
     7561 atgatgttgc cgtctttgta agtccaggtg attttttcgt agcggaactc aatgcgttcc
     7621 aggtggttat gcttctcttt ggaaggctcc ttgatgtcgt gcatcagcgg agtgactctg
     7681 accagcttga cgttatcaag ccgggtgttg aagtactcca cttcctgacc ggcatcgttg
     7741 atgcggtaaa acttaaattc tgccgttttc agggtctggc cggtggtgac ggccttgtag
     7801 agatacgggc tggacgcatc gatttctttg gtaaacgtaa agggcttgtg agtacgggta
     7861 ccggtcagtt tgccggtgtt gttgtcggtc gggatgtaca catcgtgatc cagcgccacc
     7921 acttcgatgc tgccttcgcg cccctgaacg tccacggagc ctttgatatc cgcgccgccg
     7981 tcatctttca gccagagata agcaggaata gccatgagaa ttactctcct tgttagtgtg
     8041 attgatgcac cgccttctgg cggtatgttt tatttcacgt cctgacaggc gtcagaacgc
     8101 ggaacaagac tgatttcgac gcgccggttg actgcccggc cctgtggcgt atcgttggtc
     8161 gccgcaggct ggctctcgcc cagtccctgt acggcaaaac aggtggccgg gatgtcgctg
     8221 gtctgcagca tccagttacg caccgcttcg gcacgtcgca gcgataactg ctgattgctt
     8281 ttttcgtcgc cggtggcgtc ggtatatccg gccacgagga taagccagcc cggttttgcc
     8341 cggatgttca ccagtgcgtc taccagcact tttgtcgagc cgtctttcag gcgggcctgt
     8401 ccgacgtcaa acagcgacat actgtcaaga cgcacggtct gcgcctgaag cgaggctgtc
     8461 acttccattt tttgctcagg cggacgccag tcatgaatgg cgcgtaatac cggctggcgg
     8521 atgtgttcgc cggggtataa ccccagaccg agacgcagcg gttctccttc ccggtaatat
     8581 ccatcaagca tgaccgcatc gtctttcagc accgacagac gacgggcttt ggtgataaat
     8641 tcctccgccg gaacggcata aaactggtgc agatcgtcac cgatatgccg taataactgg
     8701 cgattcgccg tggctgacag acacagcgcg gcgatacccg ccacggtggt gatgcccagc
     8761 atggtcacgc aggctcgtcg cagcggggta aagcccgact gacgcggcaa ccgccgtaac
     8821 agggcatccg gaaacggcag cgtggcgtct atgccggtgt ccgcgatatc cgtcgtcagg
     8881 ccggttctgg cggtgatcca cgactgccac aggttgttgt ccactgcagg caacgagggg
     8941 ggcagcccca cggccatcgc cagtggcggg catttcgcct ccgggccgtt tagtgccgcc
     9001 agcacattaa gattcagcca ctgcatcagg ctttcggctt tcagcaggta acagagtggc
     9061 tggctgcgct cctgtgtgct ggtctgcgtg agccactgcg cgggggaggc agtctcagct
     9121 gacgtcgcta cctgaatttc accgccggta cagataagcc acggtgaatg tgccttctcc
     9181 ggcaacggcg agccggacag cccgctccag agaagccagg ggacgtttac gcccgcccgg
     9241 cgacgcaccg tcgccatact gtgggcgaac cgtcgcagtt gtccggtcag aaccgccgca
     9301 tcccggtaca tgccgggcat gacggtatac gccacggcaa gctgcgatgc ccacgccgga
     9361 cgaagggtca gtaatcgctc agcctgcgcc acaagctgtt cttcatcaga aacatgcaga
     9421 tacagccctt ctgaaacctg ccggatcggg ctgtcagtaa acagatgcgc cgacatatcg
     9481 ccacagacca gcactaccgg ttgtcggtag gtttccggcg gcagcgatga caacccggca
     9541 tcgccggtca tctccctcca cgcctgcctg cgccggtaaa tcagcaacgc ggcaaccgtc
     9601 agaacgatag ccgccacccc ggcccatatc agtacgccag acggactgat aaacaccgac
     9661 cacagcacca gcagtaacac cattccccac agcacgacgg cctgtttcag cgtgttcctc
     9721 actcacgact ccctttaccg caggctttgc ggcagcagtt catccaccag cacgttcagc
     9781 cagtggtgca gcccccacca gacacctgcc agtagcagcg tcaacgttac cagccagaaa
     9841 aacggcgaat gcagcaaagg gtgctgacgg gtggataacg gcacgttcag taccgccgtt
     9901 tccggcagta cgccaaatgg cgcgaccagc ccgttgagcg tcgaaataag ctggtcgcgc
     9961 gccggggcca ccggatcctg ataacgcccg cgaaatccca gcagcaggac acggtgaaag
    10021 caggtcagca cagcctgtgc aggcgcgggc tcatgcaaca cctgcttcat ccgctcgtac
    10081 agcagctcgc ctgcctgcag ggtgttgaag aaatgtgact gcaatggatt cttcatccag
    10141 atggcctgac cgtcgtccat gccgccacga ctcaggactg tttcgtccag cagggcgcac
    10201 tgtgcgtaag taatgtgctc cacgctctcc tggctaaacc cggcatcttt caggcgttcg
    10261 cggaccccct ccacctgctg ctggcagtgg cgatacagct ccataccgtg acgcacggtg
    10321 gttccctgac gcagttccac caccgtcaga aacgtgtcgc gcagcagcgc gtcgatattg
    10381 atatccgtct cttttttcat gtgcgcagca ccgcaaacag ttcaggtttc aggtcgccca
    10441 ttgttcccgg cgcataaatc atgcagcacc cggactccag catcgattta gccgcgtcac
    10501 tgtgcatatc cagcgcaaaa tactggttct ccagtcgcag tggcagcgcc gccggaactg
    10561 aggtaagtgg caccagtgga acaccattca gcgccacgtt gataagcagc gtgacgtcat
    10621 caggcgcacc gattttgcag accagcggta gctggtgcag tacctgatgc gcaggcagag
    10681 aggaacgaac agacaggtaa aaatcggcct cttcccgcag acgtggatcg tgcaggtctg
    10741 ctttccagcg gttgcccggc agggattcca gatccagcgc gatcacccgt gacggcaggc
    10801 tggcttccag cagttcgcta agcagggaga acagtggcgg aaagacggtg gacggagatt
    10861 cgtggacata gggcggaacg gcgctgacgt tatgttcaag ggaaaacgtc agcagcgcac
    10921 cggcaagcct cgccagctcc cgccagacca gttcggggtg aaccgccggg tagcgcagga
    10981 aatcactcag taccggctcg gcggagttca gcgcgttaag caaccagaac agggagacat
    11041 cggcgacggc gaagtccgcc atacgctggt tgctttcccg acgcatcgcc atcaggcgct
    11101 gacatttggc ccgtagctgc aacagcagcg tgtccagagg ctgtaccagt ccgtcatggg
    11161 cgttaaacgc cagtaacggt ggaatgtaat cgccgtcctg cgtgaacatc ccgcaccaga
    11221 cgcgccagtg ggcaggtgat gtaatcctga ttgttatcat gagcaaagcg cagggacagc
    11281 gcatgacgct caacggccat atcttcactg tcactgccgt agatatcctg caccttttgc
    11341 cattcctgac gatagcgtag tggcctctca gtctgctcac cctgaccgag attaccgccg
    11401 ttaccatgtg caagcgggag cgccagcagg acaatcgcgc tgtcgctcgt cagcgcgcgc
    11461 agatcgcagg cgagcggcag aacatcgctc acatctgaat cgatcagtgt gccatcagca
    11521 aaacgcaggc gtactgcctg cgttttcagc tttccggacg tcagggcatc gcggtcaaag
    11581 agcacattcg cgatccccca cggatgacga atacaaagtt gcgcaatgct gtcattgctg
    11641 aacgcttccc agcgggcctg ctgctgaaac tgctgagagg acaggaatgt cccctcagcc
    11701 catagtggtc gatgaatttt catatcacac cacttcccgg tcaggctttc gctttcggca
    11761 tctgggaaac cagtgacagg ttgatatcca tcccttcaat ctggaaatgc ggcacggcaa
    11821 agagtctgac gcggaagaag cccggattgt cctcgatatc ttccacgata accttgccgt
    11881 cgcgcagcgg gtgagaagcc tgcagttcat cacccggatc ggtcatctcc gtcaccagcg
    11941 tgcg
//
LOCUS       DAJVTL010000126        11695 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.128, whole genome shotgun sequence.
ACCESSION   DAJVTL010000126 DAJVTL010000000
VERSION     DAJVTL010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11695
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.128"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1091
                     /gene="ade"
                     /locus_tag="OQQ26_003425"
     CDS             <1..1091
                     /gene="ade"
                     /locus_tag="OQQ26_003425"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HCS1858768.1"
                     /translation="IAAGIENCHESYQLEEGRRKLQLGMSLMIRKGSAARNLNALAPL
                     INEFNSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFG
                     LNHLGLLAPGKQADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGN
                     TIARQPVSASDFALQFTPGKRYRVIDVIHNELITHSRSSVYSENGFDRDDVCFIAVLE
                     RYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVNQVIQDGGGL
                     CVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSL
                     PVIPALKLTSQGLFDGEKFAFSTLEVTE"
     gene            complement(1138..2529)
                     /gene="uhpT"
                     /locus_tag="OQQ26_003426"
     CDS             complement(1138..2529)
                     /gene="uhpT"
                     /locus_tag="OQQ26_003426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HCS1858769.1"
                     /translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
                     SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
                     GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
                     ALIIATLGVYQHASNQYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
                     TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
                     IRREKKIQQLTVA"
     gene            complement(2667..3986)
                     /gene="uhpC"
                     /locus_tag="OQQ26_003427"
     CDS             complement(2667..3986)
                     /gene="uhpC"
                     /locus_tag="OQQ26_003427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418123.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter family glucose-6-phosphate
                     receptor UhpC"
                     /protein_id="HCS1858770.1"
                     /translation="MLPFLKAPADAPLMTDKHEIDARYRYWRRHILLTIWLGYALFYF
                     TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
                     EWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
                     MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
                     SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
                     ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA"
     gene            complement(3996..5498)
                     /gene="uhpB"
                     /locus_tag="OQQ26_003428"
     CDS             complement(3996..5498)
                     /gene="uhpB"
                     /locus_tag="OQQ26_003428"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine-protein
                     kinase/phosphatase UhpB"
                     /protein_id="HCS1858771.1"
                     /translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
                     YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
                     YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
                     IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
                     RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
                     ADNACVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG
                     IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
                     DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
     gene            complement(5498..6088)
                     /gene="uhpA"
                     /locus_tag="OQQ26_003429"
     CDS             complement(5498..6088)
                     /gene="uhpA"
                     /locus_tag="OQQ26_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HCS1858772.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQGPLTKRERQVAEKLAQGMAVKEIAA
                     ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
     gene            complement(6163..6453)
                     /gene="ilvN"
                     /locus_tag="OQQ26_003430"
     CDS             complement(6163..6453)
                     /gene="ilvN"
                     /locus_tag="OQQ26_003430"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HCS1858773.1"
                     /translation="MQNTTHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
                     QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
     gene            complement(6457..8145)
                     /gene="ilvB"
                     /locus_tag="OQQ26_003431"
     CDS             complement(6457..8145)
                     /gene="ilvB"
                     /locus_tag="OQQ26_003431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HCS1858774.1"
                     /translation="MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYD
                     ALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDS
                     IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQS
                     GRPGSVWIDIPKDVQTAVFEIEAQPAVAEKAAAPAFSEESIRDAATMINAAKRPVLYL
                     GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEA
                     DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
                     IPQVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVG
                     QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMN
                     IQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFG
                     LETCDLNNEADPQAALQEIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
     gene            complement(8251..8349)
                     /gene="ivbL"
                     /locus_tag="OQQ26_003432"
     CDS             complement(8251..8349)
                     /gene="ivbL"
                     /locus_tag="OQQ26_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HCS1858775.1"
                     /translation="MTTSMFNAKLLPTAPSAAVVVVRVVVVVGNAP"
     gene            8913..9002
                     /gene="tisB"
                     /locus_tag="OQQ26_003433"
     CDS             8913..9002
                     /gene="tisB"
                     /locus_tag="OQQ26_003433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HCS1858776.1"
                     /translation="MSLVDIAILILKLIVAALQLLDAVLKYLK"
     gene            9421..10605
                     /gene="emrD"
                     /locus_tag="OQQ26_003434"
     CDS             9421..10605
                     /gene="emrD"
                     /locus_tag="OQQ26_003434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HCS1858777.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
                     VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
                     SAMQGMGTGVGGVMARTLLRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
                     WRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
                     GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
                     SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGT
                     AGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQ
                     PV"
     gene            complement(10613..11110)
                     /locus_tag="OQQ26_003435"
     CDS             complement(10613..11110)
                     /locus_tag="OQQ26_003435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HCS1858778.1"
                     /translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLI
                     PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGSENP
                     QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
                     MTMLR"
     gene            complement(11107..11469)
                     /locus_tag="OQQ26_003436"
     CDS             complement(11107..11469)
                     /locus_tag="OQQ26_003436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HCS1858779.1"
                     /translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
                     QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
                     LFAVTHIHQLIVFIERVA"
     gene            complement(11459..>11695)
                     /locus_tag="OQQ26_003437"
     CDS             complement(11459..>11695)
                     /locus_tag="OQQ26_003437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858780.1"
                     /translation="GLDQLAPDFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAM
                     RLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG"
BASE COUNT         2778 a         3285 c         3084 g         2548 t
ORIGIN      
        1 atattgctgc gggtattgaa aactgtcacg aaagttatca gctggaagaa ggacgccgga
       61 aattacaact cggcatgtcg ttgatgatcc gcaaagggtc cgctgcccgc aatctcaacg
      121 cactggcacc gttgatcaac gaatttaaca gcccgcaatg catgctctgt accgatgacc
      181 gtaacccgtg ggaaatcgcc catgaagggc atatcgatgc cttaattcgc cgcctgatcg
      241 aacaacacaa tgtgccgctg catgtggcat atcgcgtcgc cagctggtca acggcgcgcc
      301 actttggtct gaatcacctc ggcttactgg cacccggcaa gcaggccgat atcgtcctgt
      361 tgagcgatgc gcgtaaggtc acggtgcagc aggtactggt gaaaggcgag ccgattgatg
      421 cgcaaacctt acaggcggaa gagtcggcga gactggcgca gtctgccccg ccatatggca
      481 ataccattgc ccgccagccc gtttccgcca gcgactttgc cctgcaattc acgcccggaa
      541 aacgctatcg ggtcattgac gtcatccata acgaattgat tacgcactcc cgctccagcg
      601 tctacagcga aaatggtttt gatcgcgatg atgtgtgctt tattgccgta cttgagcgtt
      661 acgggcaacg gctggctccg gcttgtggtt tgcttggcgg ctttggcctg aatgaaggcg
      721 cgctggctgc gacagtcagc catgacagcc ataatattgt ggtgatcggt cgcagtgcgg
      781 aagagatggc gctggcggtc aatcaggtga ttcaggatgg cggcgggctg tgcgtggtac
      841 gtaacggcca ggtccaaagt catctgccgt tacccattgc cgggctaatg agcaccgaca
      901 cggcgcagtc gctggcggag caaattgacg ccttgaaagc cgccgcccgt gaatgtggtc
      961 cgttaccaga tgaaccgttt attcagatgg cgtttctttc tctgccagtg atccccgcgc
     1021 tgaaactaac cagtcagggg ctgtttgatg gcgagaagtt tgccttctcc acgctggaag
     1081 tcacggaata ataaaaaaaa gcccggcgtc atgccgggca aaagtcacca gttacgttta
     1141 tgccactgtc aactgctgaa tttttttctc gcggcggatt ttgcgttctt ccatcaccgc
     1201 cactatcgcc atcaggcaga tacagccaat tgcggcgata tccagcgcgg cgaaggtgcc
     1261 tgcccagccg gtaaggccga atactggcgt cccatcggca atcattccca gacctaactt
     1321 ggcaaagctg tcgccaatca ggtaagcgaa ggtgccttta ataccatcgg cagcgccaat
     1381 cgctttttta ggtacaaagc caacagcagc cacaccaatc aacaattgcg ggccaaagac
     1441 caggaaaccc aacgcaaaaa gagaagccag atagatatat tgattgctgg catgttgata
     1501 cacaccgagc gtggcgataa tcagcgccag cgcgatgcaa gccaccaggc cacggcgacc
     1561 gttagccagg tcagagagcc agccccacag cagcgtaccg accagcgcac cagcttcaaa
     1621 cagcgtaaag ccctgaatcg ccaccgcttt agagagtttc agttcctgga acgcgtacac
     1681 ggttgaccac tggtcgatac caatacgcac cacatagagg aaaatgttgg cgaagcacag
     1741 cagccagatc actttgtttt tcagcacata ctcaacaaag atctgccact tggtcatatc
     1801 ggtagattca gtctctttgt cctcttcgct gatctcctcg ccgaacagct cttcagcttt
     1861 gccgaggcca taagattccg gggagtcgct gccgtaacgc aggccgataa aaccgacaat
     1921 cagcgcgata atcgacggga agataaacat gccgatgaca tgaccatcga acaggtaatt
     1981 tgccccgaac agcgccacac ctgctgcgcc tgcaccgcca aggttgtgag aaatgttcca
     2041 gaaaccgagg aatgtcccgc gtttacgacg cggcgtccat ttggtgatgg tggagtaact
     2101 gcacgaaccg ccggtactct ggaaaaagcc gctcaaggca tagaaggcaa tcatcaggaa
     2161 caggctaacc gagccgctgc ccatactggc actgaagccc agcatacaaa tggcagacag
     2221 gataagcata aacggcagga attgtttggt gtttttgccg tcggcgtagt aggaaaccag
     2281 cgttttaccc acgccataag tgatggagaa acccaggccg atcatcccca gttgcgtcat
     2341 gctcaacccg taggtcgaaa tcatatcgtt ctgcgcgatg ttaaagttct tgcgaatcag
     2401 gtacatcgtc aggtagccga taaagaccac caggtaggat tgcatgaacg gtttgaacca
     2461 cattttgcgc cgcacttcga gcggaaggtc cagggtcggc ttgcgaacct ggtttaggaa
     2521 agccagcatg ggttactcct gaaatgaata cctgcgtgag gcatgcattg taaaaatcag
     2581 cagcaaatca ggcctgagat agcgtccagg aaaaacctgg aaaatttctt agttttgccg
     2641 gatatgaagt gaaaaggtga gatgcatcac gcttcacgcg gtgtctgggc gttcaaaaag
     2701 ggcagtaaca gcagtgcgga aatcccggca gcgatagaga taaccacaaa aaatccgctc
     2761 cagtgccagg tatcgagtac tttcgccagt ggccaaccag caagcgacgc ccccagataa
     2821 gcaaacaagc cgacaaaccc cgtcgccgcc cctgccgcct ctttgtggga acactctgcc
     2881 gccgccatgc cgattaacat ctgtgggcca aagacaaaaa aaccaatggt gaagaagcag
     2941 gttgcctgca tcacgtagct ggcaaatggc atcagccaca gggagccgac tgaaagcaaa
     3001 attccggcgg cgaaaatcaa attcatcggc cctcggttgc cgttaaacaa tttgtccgag
     3061 ccccaacccg ctaccagcgc accgataaat ccacccagtt caaacatcgt cactgccgta
     3121 ttcgccgtga ccagatcgac gcccagcgtc tcggacatat acaaattgcc ccagtcgttg
     3181 atcgccgccc ggaccacata gaccagcaca tagcaaaacg aaagcagcca gatatacgga
     3241 ttcagcaaca catatttggt gaggatctct ttacgcgtca gccctgcccc ttcttgttgt
     3301 tgagctatct ccagcgcgtc gtgtcgccat tcaccgaccg ccggtaaacc taacgcctgc
     3361 gggcgatcgc gcagccgcca gcagagaaaa attcccacga cgatcgccat acaaccagca
     3421 atcatcatcc cggcacgcca gccgtaatgt agtgcagccg ctgccatcac aatgggaata
     3481 agtgcgccgc cgacgttatg cgccgtgttc cataatgccc accaaccacc gcgctcggta
     3541 cgtgaatacc aggccgttaa cagacgcgca cacaccggtg aaccccagcc ctggaaaaag
     3601 gcgttcagca cccagagcac ggcaaacgcc catagcgacg tcgagaagcc aaacagaatg
     3661 ttgatgatgc ccgtggcaat aagccctatc cccataaaat aacgggcatt tgagcgatcg
     3721 ctgacaatgc cggagacaaa cttcgacacg ccgtaagtaa tgtaaaacag ggttgctaac
     3781 aggccgatat cgctacggct gagcacgccg ttagcaagga tttctggtac cgcggcgtta
     3841 aaacttttcc gcgtgaagta aaacagcgcg taacccagcc agatggtcag cagaatatgc
     3901 cgacgccagt agcgataacg ggcatcaatt tcatgtttat cagtcattaa tggcgcatcg
     3961 gcaggcgctt tcagaaacgg caacatcatc gaaccttaga cataacgttg aggtagagaa
     4021 acgctgacac gcgtgccgtg cagacaggaa atgtgtaatg tgccgcccag cgccgttacg
     4081 cgctcgcgca ttccggtgag gccaaaacct tgttgcccgg aacccggcgg caaaccgctg
     4141 ccatcgtctt caattaccag catcaaccgt tcatcctgct gccagccttg cagggtgacc
     4201 gcgctggcat cggcatgttt cacaatgtta ttcagccctt cctggcagac gcgaaatagc
     4261 gtcacacgct ggttttcgct taacgctgat tcatcgattc gccattcgag atggctgaca
     4321 ataccgcgcc cttccagctc catttcccgc atcagtgagc ggatggcctg ctccagggtg
     4381 agatcatcca actggcgcgg acgtaaccga cccaacaaac ggcgcaccgc gtcgtaaacg
     4441 cccagcgata gttgttcgat gagctgtccg ctctgcttca cgcaggcgtt atctgccgcc
     4501 agccgctgaa caatgcccgc ttgagtacga atagcagtga tggtctggcc gatatcatca
     4561 tgcagctcac gcgccacatc acggcgcacg ctctcttcgg tttccagcaa ccgttcagcg
     4621 agatgctgat tgcgcgccag ttccttttgc agcgactggt taagttcacg caaccgctgg
     4681 atgcctgcgc ccagtaacaa ccctgtcaga ctttgcacca gcagcgagag caataaatcc
     4741 accggatgat cgcgccaggt ttgactggcg atcagcgcga tggcgttcat caatgtcgca
     4801 atcagcgccc cttgccagcc atagtgccag gccagcgcga taatcggcag cgccagacag
     4861 aatggcgtaa agcgcgacag ttcgtccggc aatcccaact ggagccagag actgataaca
     4921 aacagcagca agtaccagac cagatgtcgc ccgcgccagt tgattggctg agaaaccagt
     4981 gacgggccga gcggcagcca ggtgttattg gcgagatagt gccagaacac cagacatatc
     5041 ggggccagcg tcaggccgcc agttaaagtc agcaacagcg cattccacga ctctttgccg
     5101 tgccaaagcc agggcagcga ctgcaacaac gccgccgccg ttaacgccgc accctgtaac
     5161 agcaaggtgc gccagtcacg ctgatggcga tagcgcgaga tcagcgctac gggcagtaac
     5221 gtcagtaaac taccgatcat caataacgga aaatgggtta aaccgaccgc ctgcgttagc
     5281 cagtaaatca gcagccactc cgcgcccagc agcaccggcc agtatccgcg cgggcattgc
     5341 agcattagcc ccagacgcag accaaacgga aataacagca ccgccatatc agggcgctca
     5401 accagatgca ggctgatact ccacaggcaa aaccatgcgg cagagaagat aaaaaagcag
     5461 gcaataacgg taattaagcg ggagaacaac gtcttcatca ccagccatca aacatgcggc
     5521 gcgccagctc tacgtcgtta ctgacgccca gtttttccat cagattggcg cgatggacgt
     5581 gtaccgtttt cggtgacaag cccagttcgg cagcaatctc tttcaccgcc attccttgcg
     5641 ccagtttttc cgccacctgg cgttcgcgtt tggttagcgg gccctggcga ccggatgcca
     5701 gtttaatggc aatatccggc gtcagataac agccgcccgt ggcaaccgta tgcaccgccg
     5761 caatcagttc gtcagggcta cagcgtttgg agagaaagcc gcgcgccccc gcgttaagcg
     5821 cctgctcaac cagcgccgga ctgtcgtgaa cggagagcat aatcgtcgcc atacctttcg
     5881 gcagctggct tagcagctcc agaccggaga tatcgggcat ggagatatcg caaatacaca
     5941 cctgcacacc gcgccccggc agccccgcca gcgcctcgcg ccccgaacca aactcggcaa
     6001 ctacctgcaa atcaggttcc agccccagca gctgcgcaaa gccggagcgg acgatgaggt
     6061 gatcgtctat aagggcaacg gtgatcatgg tcttgtcctg gcgggtaaaa aaaaacgcgc
     6121 ttaccttaac gataagcgcg atgttgttca agccttgagc ggttactgaa aaaacaccgc
     6181 gatcttgtta aacatcgtcg gatcggactg attacgctgc actttcacga catcttccag
     6241 cttatcgatt tggcttatca tctgctccag acgctggtcg tcattgacca gtagccagat
     6301 atggcttttg tcgctgtcct gaatcggcag acaaagaatg ccttcaacgt taaaagcgcg
     6361 gcgggcaaaa aggccacaaa cgtgggtcat tacgcccgga tggttgcgaa cggtgagctc
     6421 cagaattacg ttgtcatgag ttgtgttttg catggcttat tcccccacca tttcagtatt
     6481 cgccgcacct ggcggcacca tcgggtaaac tttttcttcg gcatcaatgc gcacatggat
     6541 cagcgccggg ccagggcgat tgatgatttc ctgcaatgca gcctgcggat cggcttcgtt
     6601 attcaaatca caggtttcga ggccgaatcc ggcggcaatc tgcataaagt tgattttgcc
     6661 cggataggtg gcggcaaaaa cgccttgctc gtagaacaga ctctgttgct gatgcaccag
     6721 ccccagcgct tcgttgttca tcagaatgat tttgacatcc agctgatttt cactggcggt
     6781 cgccatctcc tgaatattca tcatcaggct gccgtcgccg gagaaacaca acactttgcg
     6841 atccgggttc gccagcgccg cgccaatcgc cgcaggcagg ccaaaaccca tcgtgcccag
     6901 cccaccggag gtcagccact ggcgtgggcg attgagcgga taagcttgcg cggtccacat
     6961 ctgatgctga cccacatcgg tggtgataat cgcattgtca tcgacacagg cggcaacggc
     7021 gttgatcagg ccgtaatggc ttaatggatc gcacgctttc gggattggac acgggaattc
     7081 gcgctgcaaa tccgctacca actggtgcca ctctgcacgc ggttgcgctt ccacctgcgg
     7141 gatcaattgc gccagcacgt catcaacatc cgcctgaatc gccacatgcg gctgcttgat
     7201 tttacccagc tctgcgcgat cgatatcgac atgaataatt ttggcattcg gacagaactg
     7261 ctcggttttg ccaatcgccc ggtcatcaaa acgcgcaccg agcacaatca acaaatccgc
     7321 ctcctgcaaa atatagttgg tactgcgcac gccgtgcatc cccagcatac ccagcgacaa
     7381 cggatgcgct tttggcagca tgcccagcgc cattaaagtc atggtggtag gcagttgcgc
     7441 tttctccgcc agttcacgca cccgcgcagg cgcattgatc acaccaccac ccagataaag
     7501 caccgggcgt ttggcagcgt taatcattgt agctgcgtca cgaatgcttt cttcgctaaa
     7561 ggcgggtgca gcggcttttt ctgccaccgc gggctgagct tcaatctcaa aaaccgccgt
     7621 ttgtacatcc ttaggaatgt ctatccacac cgagccaggg cggcctgatt gcgcaatgcg
     7681 gaaggcatcg ctcatgacct gtgggagctc ttcgatatgt ctgaccagat agttgtgttt
     7741 ggttatgggg atagagatgc cgtaggtgtc cacttcctgg aaggcgtcgg tgccgatcat
     7801 cgaggcggga acctgaccag tgatgcaaat cagcgggatg gagtccagcc gcgcatcagc
     7861 aatggcggtc accaggttag tcgcacccgg cccgctacag gccatacaga ccgccggttt
     7921 accgtcggtg cgcgccattc cctgagcgat aaaccccgcg ccctgttcat ggcgagccag
     7981 aatatggcgg atttgcgtgc tttggcttaa ggcgtcgtaa acaggcagga tagaaccgcc
     8041 cggaatgccc gtcacaatct taatgccctg ctgttccagg aaatgaacga taaattctgc
     8101 gccggtaaag cgcttacgcg tcgatgttgt gcccgaactt gccatgctcc agtccttttc
     8161 ttctgggccg actttccggg aggtgcttaa acgaaaaacc ccgcccggtt tgcgccggcg
     8221 gggttttgga atcgtgtgtt gttccagtcc ctacggcgca ttgccgacga cgaccaccac
     8281 acgcacgacg accactgcgg cggatggcgc agttggtagt agttttgcgt tgaacatgga
     8341 agtagtcatt ggggaccttg ttggttttgt gtttaacaat atttatacaa gcacagcttt
     8401 acaggggaga caatggaaaa tttttcagca agggaaaatt gaggggttgt tcacgttttg
     8461 tactgaattg cagataacaa aaaaccccgc cggagcgagg tttcgtcagc cgcctgcggc
     8521 tggtaaccgc aaagcacact gtattatgtc aacactgaaa gtatacgtgt tccgcgcaga
     8581 acgcgcaatt tcggcacgaa ttttgacgta tttagtgcat agttgagtat cgatcacagt
     8641 ttgcgttttg tttaaatatt actgtttatt tacacagtaa acttctataa tatcactgta
     8701 cgcaatgtgt tatgcggggg ccgcatcgtt acccggcgca ctaagtcctg gctgaaacgg
     8761 gtggtgccgt cagcgcctta acccgcgtga gcacactgtg ttatgtcaac aagcacaacg
     8821 tttctccttg agataccgcg tgcacaacag ctggcaacag gcagcggaaa ggtacgtcag
     8881 ctggcagtgc tcctgaacca caggagacgc gtatgagcct ggtggatatc gccattctta
     8941 tcctcaaact cattgttgca gcactgcaac tgcttgatgc tgttctgaaa tacctgaagt
     9001 aattcagatt caagtcgcac caaaggggag cgggtaaccg ctcccctttt atatttagcg
     9061 tgcgggttgg agttgggggc ttcttctacc agcagaatgt ttgcacctgc gctgcctgtg
     9121 cccctcaccc tagccctctc cccaaagggg cgagggggaa accaccgttc ccttgcagaa
     9181 aatgagctaa acattgcacg ggacggtccc ctcgcccctt tggggagagg gttacagttc
     9241 gcacgtaatc cctcccggca acatttattg ccgcttttgt ttacatattc tgccgctaaa
     9301 caattcccca ttcctggcgt atatctggct aacattcatc aatgtgatag attcctctcc
     9361 cgcatttatg ggaatgcgta gtgacttatt ctaattattt ttataaaagc atccgtgata
     9421 atgaaaaggc aaagaaacgt caatttgtta ttgatgttgg tattactcgt ggccgtcggt
     9481 cagatggcgc aaaccattta tattccagct attgccgata tggcgcgcga tctcaacgtc
     9541 cgtgaagggg cggtgcagag cgtaatgggc gcttatctgc tgacttacgg tgtctcacag
     9601 ctgttttatg gcccgatttc cgaccgtgtg ggtcgccgac cggtgatcct cgtcggaatg
     9661 tctattttta tgctggcaac gctggtcgcg gtcacgacct ccagtttgac ggtattgatt
     9721 gccgccagcg cgatgcaggg gatgggcacc ggcgttggcg gcgtaatggc gcgtactttg
     9781 ctgcgagatt tatatgaacg gacacagttg cgccatgcta acagcctgtt aaacatgggg
     9841 attctcgtca gtccgttgct cgcaccgcta atcggcggtc tgctggatac gatgtggaac
     9901 tggcgcgcct gttatctctt tttgttggtt ctttgtgctg gtgtgacctt cagtatggcc
     9961 cgctggatgc cggaaacgcg tccggtcgat gcaccgcgca cgcgcctgct taccagttat
    10021 aaaacgcttt ttggtaacag cggttttaac tgttatttgc tgatgctgat tggcggtctg
    10081 gccgggattg ccgcctttga agcctgctcc ggcgtgctga tgggcgcggt gttagggctg
    10141 agcagtatga cggtcagtat tttgtttatt ctgccgattc cggcagcgtt ttttggcgca
    10201 tggtttgccg gacgtcccaa taaacgcttc tccacgttaa tgtggcagtc ggttatctgc
    10261 tgcctgctgg ctggcttgct gatgtggatc cccgactggt ttggcgtgat gaatgtctgg
    10321 acgctgctcg ttcccgccgc gctgttcttt ttcggtgccg ggatgctgtt tccgctggcg
    10381 accagcggcg cgatggagcc gttccccttc ctggcgggca cggctggcgc gctggtcggc
    10441 ggtctgcaaa acattggttc cggcgtgctg gcgtcgctct ctgcgatgtt gccgcaaacc
    10501 ggtcagggta gcctggggtt attgatgacc ttaatgggat tgttgatcgt gctgtgctgg
    10561 ctgccgctgg cgacgcggat gtcgcatcag gggcagcccg tttaagcgca cgtcaccgca
    10621 gcatcgtcat cagctccatg ggagaacgat gctgctttat cagatcacgc atcacccgca
    10681 tatgcggtgc ggagtaagaa taaaacgcct gatagcccgc acaaagcacg ctgtctggcg
    10741 tctcctgccg agcgtgcggg cacaggcgat gccagtcgca cgcctggcag tcacggcgcg
    10801 gttgcgggtt ttcgctgcca caccattttt gtaaggtggc gtcaaaaagc tcaatcgaga
    10861 tacgactgat atctgcccgc acccaacact cgaacagggc aattaaaaat ttcccccaca
    10921 gctctgctgt caccgaagcg gccgtcagat cgccccggtc atcaaattca agatagggaa
    10981 tgagctgtac ggagcgaatg ccccgctgtt tgaaattgtg ataaaaatcg gcaggttgca
    11041 gagcatcctt atactctaca accagtttat gcctgtcctc ttcagcatca atgacctgac
    11101 ttcctgtcat gcgactctct caataaatac gataagttga tgtatatgcg ttacagcaaa
    11161 cagtattgcg agagataaca ccgcgaggga gatcaaaaat ttgtcacgga ctacgtgaaa
    11221 ttgggaaaaa tcgctattcg tgacatccat taaattgcga ttacgggtgt agtgccagag
    11281 gatcagcgcc acgatggcga ggatgccaat cgaaatccag aataacatgc ccgcctggtg
    11341 ccagttgtgt ttgatagcca acgccatcaa cgcgccgtaa cccagcatgg tacgaaacca
    11401 cgccagtgat gtgcgctccg gctgcagccc tgggtcggca atgcgtctgg ctttgcggct
    11461 atccggcata caacaccagt cccataacga tcaccgccac aaccatcaat attaagctga
    11521 tgattaataa gctgttggtg tagggcagat cctctttcag acgcatcgct ttttcattgc
    11581 gtaaccagcg caggtaacca tacatcgcta acccgccgga aaacagacac aacaacaacg
    11641 ccagcagttc gcgaatgacg ggcgtggcga aatctggcgc aagttggtca agccc
//
LOCUS       DAJVTL010000127        11657 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.129, whole genome shotgun sequence.
ACCESSION   DAJVTL010000127 DAJVTL010000000
VERSION     DAJVTL010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11657
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.129"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(121..327)
                     /locus_tag="OQQ26_003438"
     CDS             complement(121..327)
                     /locus_tag="OQQ26_003438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HCS1858781.1"
                     /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMEQAEKATGDFY"
     gene            640..729
                     /gene="kdpF"
                     /locus_tag="OQQ26_003439"
     CDS             640..729
                     /gene="kdpF"
                     /locus_tag="OQQ26_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HCS1858782.1"
                     /translation="MSAGVIAGVLLVFLLLGYLVYALLNAEAF"
     gene            729..2402
                     /gene="kdpA"
                     /locus_tag="OQQ26_003440"
     CDS             729..2402
                     /gene="kdpA"
                     /locus_tag="OQQ26_003440"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706533.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HCS1858783.1"
                     /translation="MAAQGFLLIATFILVLMVLARPLGSGLARLINDIPLPGTAGVER
                     ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
                     LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSM
                     STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVAGD
                     RRQGRMLLWAMSVIFVICTGVVMWAEVQGNPHLLALDADSSINMEGKESRFGVLVSSL
                     FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVSEMKLTALAILVTPTLVLMGAALAMTTDAGRSAMLNPDP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
     gene            2425..4473
                     /gene="kdpB"
                     /locus_tag="OQQ26_003441"
     CDS             2425..4473
                     /gene="kdpB"
                     /locus_tag="OQQ26_003441"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HCS1858784.1"
                     /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL
                     LTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARKLREPKYGAVADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG
                     ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE
                     IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV
                     AGMSRMLGTNVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA
                     DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM
                     IRKGSVDAIRRHVEANGGHFPADVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK
                     GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
                     EGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK
                     QMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFN
                     ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV
                     "
     gene            4482..5054
                     /gene="kdpC"
                     /locus_tag="OQQ26_003442"
     CDS             4482..5054
                     /gene="kdpC"
                     /locus_tag="OQQ26_003442"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HCS1858785.1"
                     /translation="MSGLRPALSTFIFLLLITGGVYPLLTNVLGQWWFPWQANGSLIR
                     EGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSSPELDKLIAARV
                     AALRAANPDASASVPVELVTASASELDNNITPQAAVWQIPRVAKARNLSVEQLTQLIA
                     KYSQQPLVKYIGQPVVNIVELNLALDKLDE"
     gene            5047..7731
                     /gene="kdpD"
                     /locus_tag="OQQ26_003443"
     CDS             5047..7731
                     /gene="kdpD"
                     /locus_tag="OQQ26_003443"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     KdpD"
                     /protein_id="HCS1858786.1"
                     /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE
                     AQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPPKRLAYRGRHISEFDLDAALARR
                     PALILMDELAHSNALGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI
                     QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL
                     RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR
                     LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
                     HNLGKIILGRPASRLWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFK
                     DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
                     ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
                     EQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVLLPDDNGKLQPLTHSQG
                     MTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI
                     PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL
                     FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT
                     LEEVVGSALQMLEPGLLSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE
                     IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV
                     DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM"
     gene            7728..8405
                     /gene="kdpE"
                     /locus_tag="OQQ26_003444"
     CDS             7728..8405
                     /gene="kdpE"
                     /locus_tag="OQQ26_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000186087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator KdpE"
                     /protein_id="HCS1858787.1"
                     /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIEFIRDLRQWSPVPVIVLSARSEESDKIAALDAGADDYLSKP
                     FGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLL
                     AMLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG
                     IGYRFMF"
     gene            complement(8621..8878)
                     /locus_tag="OQQ26_003445"
     CDS             complement(8621..8878)
                     /locus_tag="OQQ26_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858788.1"
                     /translation="MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVG
                     RLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS"
     gene            9001..11199
                     /gene="speF"
                     /locus_tag="OQQ26_003446"
     CDS             9001..11199
                     /gene="speF"
                     /locus_tag="OQQ26_003446"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase SpeF"
                     /protein_id="HCS1858789.1"
                     /translation="MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVT
                     CGKLDEIDATGYGIPVFIATENQERVPAEYLPRISGVFENCESRREFYGRQLETAASH
                     YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLC
                     NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGVLVL
                     FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQR
                     AKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCS
                     PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH
                     ASTSPFYPLFAALDINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPEQV
                     DGKPWQSYETAQIAVDLHFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNG
                     EYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL
                     ESDAPLAEVLPSIHKQHEERYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKEHFPRV
                     SMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS
                     ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL"
     gene            11196..>11657
                     /locus_tag="OQQ26_003447"
     CDS             11196..>11657
                     /locus_tag="OQQ26_003447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1858790.1"
                     /translation="MSQAKSNKMGVVQLTILTMVNIMGSGIIMLPTKLAEVGTISIIS
                     WLVTAVGSMALAWAFAKYGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA
                     IAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITV"
BASE COUNT         2583 a         2947 c         3215 g         2912 t
ORIGIN      
        1 tttttcctga atatatttca gctgggtaat accatatcta aatatttacc tgaacatctt
       61 cctaataaaa aaccgccagc atctccacta gcggttttca atgtattcaa aactcggcaa
      121 tcagtaaaaa tcaccggttg ccttttcggc ctgttccatc caaaccggtt tatcgctggt
      181 tttcgaccag acgcggtgca ggtagctgta aaagcgggcg cggtctttcc agaaaagcat
      241 gaaaggcaga gccagaacgc ccgctgcaac cgcatatgta cggcgtaaaa agataagcca
      301 tgcaggatat tctctgtaga gttccatact tttctccccc ttttgtatct acccggtgaa
      361 tggcaccgga aaaatgaatt tgtttatctg atgaaaatag taccgctttt tgtgtaattt
      421 tactactcat ccgaccactt atttttgctt attgatggtt tatttacatt caccctgtaa
      481 ttaagttaca caaaagttaa attaatacta aacattagtt aaatcatggc ttttgccatt
      541 tttatacttt ttttacaccc cgtccgcaga tttttgcgaa atctttgcag ccagaattct
      601 acccttccgg tatcactttt aggccactgg aggtgcactg tgagtgcagg cgtgatagcc
      661 ggcgtgttgc tggtgttttt attactgggt tatttggttt atgccctgct caatgcggag
      721 gcgttctgat ggctgcgcaa gggttcttac tgatcgccac gtttatactg gtgttaatgg
      781 tgctggcgcg tcctttaggc agcgggctgg cgcggctgat taatgacatt cctcttccag
      841 gtacagcggg cgttgaacgt atactctttc gtttacctgg cgtctctgac catgagatga
      901 actggaagca atatctttgt gccattctcg gcctgaacat gctggggctg gcggtgctgt
      961 tttttatgtt gctcggtcag cactatctgc cgcttaatcc acagcagttg ccggggctgt
     1021 cgtgggatct ggcgctgaat accgccgtca gctttgtcac gaataccaac tggcaatctt
     1081 atagcggtga aaccacgttg agctatttca gccagatggc gggcttaacg gtgcaaaact
     1141 ttctttctgc cgccagcggg attgcggtga tttttgccct cattcgtgca tttacccgcc
     1201 agagcatgag cacactcggg aatgcctggg tcgatctgct acgcatcacg ttatgggtgc
     1261 tcgtccctgt ggcgttgttg atcgcactgt tttttattca acaaggtgcg ttgcaaaact
     1321 ttctgcccta tcaggcggtg aataccgttg aaggagcgca acagctgtta cccatggggc
     1381 ctgtagcttc tcaggaagcg atcaaaatgc tcggcactaa cggcggtggt ttctttaatg
     1441 ccaactcgtc gcatccgttt gaaaacccaa ccgcactgac caacttcgtg cagatgctgg
     1501 cgatcttctt gatcccaaca gcgctgtgct ttgcctttgg tgaagtggcg ggcgatcgcc
     1561 gccaggggcg catgttgctg tgggcgatgt cagtaatttt tgtcatctgc acaggcgtgg
     1621 tgatgtgggc agaagttcag ggtaatcctc atctgctggc actggacgcg gacagcagca
     1681 tcaatatgga aggtaaagag agccgtttcg gcgtgctggt cagtagcctg tttgcggtcg
     1741 tgactacagc ggcttcctgt ggcgcggtga ttgcgatgca tgattcgttt accgctctcg
     1801 gcggcatggt gccaatgtgg ctgatgcaaa ttggtgaagt ggtgttcggc ggtgtcggct
     1861 ctggtcttta cggcatgatg ctgtttgtcc tgctggcggt gtttattgcc gggctgatga
     1921 ttggtcgtac accggaatat ctgggtaaaa aaatcgacgt aagcgagatg aaactgaccg
     1981 cgctggcgat tctggttacc ccaacactgg tgctgatggg cgcggcgttg gcgatgacga
     2041 ccgacgccgg acgtagcgcc atgctcaacc ctgacccgca tggttttagc gaagtgctgt
     2101 acgccgtgtc gtccgccgct aacaacaacg gcagcgcctt tgccggatta agcgccaact
     2161 ctccgttctg gaactgttta ctagcgttct gcatgtttgt cggtcgcttc ggggtgatta
     2221 tcccggtgat ggcaattgcc ggttcgctgg tgagtaaaaa gagccaaccc gccagctccg
     2281 gcacgctgcc aacgcacggc ccgctgtttg ttggcctgtt aatcggcacc gtgttgctgg
     2341 ttggcgcact gacctttatc cctgccctgg cgcttggtcc ggtggcggaa tatctctcct
     2401 gatgatattg agtgagcact gaatatgagt cgtaaacaac tggcgctatt cgaaccaaca
     2461 cttgtcgttc aggcgctgaa agaagcggtg aaaaaattaa acccgcaggc gcaatggcgc
     2521 aatccggtga tgtttatcgt ctggatcggc agtctgctga ccacctgtat tagcatcgcg
     2581 atggcaagcg gtgcgatgcc tggcaatgcg ctgtttagcg cggccattag cggctggctg
     2641 tggatcaccg tactgttcgc taatttcgcc gaggcgctgg cagaaggccg cagtaaagcg
     2701 caggccaaca gtctgaaagg ggtgaaaaaa accgcttttg ctcgaaagct gcgcgaaccg
     2761 aaatatggcg ctgtggcaga caaagttcct gccgatcaac tgcgtaaagg tgacatcgtg
     2821 ctggtagaag ctggcgatat tatcccctgc gatggtgaag tcattgaagg cggcgcatcg
     2881 gtcgatgaaa gcgccatcac cggggaatcg gcaccggtga tccgtgaatc cggcggcgat
     2941 tttgcctccg tcaccggcgg cacgcgtatt ctttctgact ggctggtgat tgagtgtagc
     3001 gttaaccccg gcgagacatt tctggatcgg atgatcgcga tggtggaagg cgcacagcga
     3061 cgcaaaacgc cgaacgagat tgccctgacc attctgctga ttgccctgac tatcgtcttt
     3121 ttactggcaa ccgccacgct gtggccgttt tccgcgtggg gcggcaacgc ggtcagcgta
     3181 acggtactgg tggcgctact ggtctgtctg atcccaacca ctattggcgg cttgctgtcg
     3241 gcgatcggcg tcgccgggat gagccggatg ctgggcacga atgtgattgc caccagcgga
     3301 cgtgcagttg aagcggcggg tgacgttgac gtcctgctgc tggataaaac cggcaccatc
     3361 acactcggta accgtcaggc gtcggagttt atccctgcgc agggcgtgga tgaaaaaacg
     3421 ctggccgacg ccgcacaact ggcttcgctg gctgatgaaa cgccggaagg ccgcagtatt
     3481 gtgatcctcg ccaagcaacg ttttaacctg cgcgagcgcg atgtgcagtc gctccatgcc
     3541 acctttgtac cgtttactgc gcaaagccgc atgagcggga tcaacatcga caaccgcatg
     3601 atccgtaaag gttctgtcga tgccattcgc cgccatgttg aggctaacgg tggtcacttc
     3661 cctgccgatg ttgatcaaaa agtcgatcag gttgcgcgtc agggagccac gccgctggtg
     3721 gtggtggaag gttctcgtgt gctgggcgtt attgcgctga aagatatcgt caaaggcggt
     3781 attaaagagc gcttcgccca gctgcgcaaa atgggcatta aaacggtgat gattaccggc
     3841 gataaccgtc tgactgccgc cgcgattgct gcggaagcgg gtgtcgatga ttttctcgcc
     3901 gaagcgacac cggaggccaa gctggcattg attcgtcagt atcaggcgga aggccgtttg
     3961 gtggcgatga ccggcgacgg caccaacgat gctccggcac tggcgcaggc agatgtcgcg
     4021 gtagcgatga actccggtac tcaggcggcg aaagaagcag gcaatatggt cgatctcgac
     4081 tctaacccga ccaagttgat cgaggtggtg catattggca aacagatgct gatgacccgt
     4141 ggctcgctga ccaccttcag cattgccaac gatgtggcga aatacttcgc cattattccg
     4201 gcggcgttcg cggcaacgta tccgcagtta aatgcgctga acatcatgcg ccttcattcg
     4261 cccgactccg ccattctcag tgcggtcatt ttcaacgcct tgattatcgt ctttttgatt
     4321 cctctggcgt taaaaggcgt gagttataaa ccgcttaccg cttctgccat gttgcgccgt
     4381 aacttatgga tttacggtct gggtgggctg ctggtgccgt ttattggtat caaagtgatt
     4441 gatttactgc tgaccgtttg cggtctggtg tgaggtttac catgagtgga ttacgtccgg
     4501 cattatcgac atttatcttt ctgttattga ttactggcgg cgtttacccg ctgctgacca
     4561 acgtgctggg gcaatggtgg tttccctggc aggccaacgg ttcgttgatt cgtgaaggtg
     4621 atacggtgcg tggctcggca ttaatcgggc agaattttac cggcaacggc tattttcatg
     4681 gtcgcccgtc agcaacggct gaaatgccct ataatccaca ggcttctggc gggagcaatc
     4741 tggcggtcag tagccctgag ctggataaac taatagccgc acgcgttgct gcattacggg
     4801 ccgctaaccc ggatgccagc gcgagcgttc cggttgaact ggtgacggca tcggcaagcg
     4861 agctggacaa taatatcacc ccgcaagcgg cggtctggca aatcccacgc gtggcgaaag
     4921 cgcgtaatct cagcgttgaa cagctcacgc aactgatcgc aaaatacagc caacaaccgc
     4981 tggtgaaata tatcggccag ccggtcgtca acattgtcga actcaatctg gcgctggata
     5041 agcttgatga ataacgaacc cttacgtccc gaccccgatc gtctgctgga acaaactgcc
     5101 gcgccgcatc gggggaagct gaaagttttc ttcggtgcct gtgcaggcgt cgggaagacc
     5161 tgggcgatgc tggcagaagc ccagcgactg cgggcgcaag ggctggatat tgtggttggc
     5221 gtggtagaaa cccacgggcg gaaagatacc gccgccatgc tggaaggact ggctgttctg
     5281 ccgcccaaac gcctggcgta ccgtgggcgg catatcagcg agtttgacct cgatgccgcc
     5341 ctcgcccgcc gtccggcgct gatcttaatg gacgaactgg cgcacagtaa tgcgctaggt
     5401 tctcgtcacc ctaaacgctg gcaggacatc gaagagctgc tggaagcagg cattgatgtt
     5461 tttactaccg tcaacgttca acatctggaa agcctgaatg atgtggtcag cggcgtcacc
     5521 ggaattcagg tacgggaaac cgtgcccgat ccttttttcg atgccgccga cgacgtggtt
     5581 ctggtggact tgcccccgga cgatctgcgc cagcggctga aagaaggcaa agtctatatt
     5641 gccgggcagg cggagcgcgc cattgaacat tttttccgca aaggcaatct gatcgccctg
     5701 cgcgaactgg cactgcgccg tactgccgat cgcgttgatg agcaaatgcg cgcctggcgg
     5761 gggcatcctg gcgaagagaa agtctggcac acgcgcgacg cgatcctttt atgcatcggg
     5821 cataacaccg gtagtgagaa actggtccgc gcggcggcgc ggctggcgtc acggctgggt
     5881 agcgtctggc acgcggtgta tgttgaaacc cctgccctgc atcgcttacc ggagaaaaaa
     5941 cgtcgggcaa ttctcagcgc cttacgtctg gcgcaggagc tgggcgcgga gacggcaaca
     6001 ctttctgatc cagcggaaga gaaagcggta gtgcgttatg cccgtgaaca taatctcggc
     6061 aagattattc tcggtcgccc agcctcgcgc ctctggtggc gtcgggaaac gtttgctgac
     6121 cgactggcgc gcatcgcccc cgatctcgat caggtgctgg tcgcgcttga tgaaccaccc
     6181 gcccgcacga ttaacaacgc gccggatagc cgctctttta aagacaagtg gcgggtacag
     6241 attcagggat gcgtggttgc cgccgcgtta tgcgccgtta tcaccttaat tgccatgcag
     6301 tggctgatgg cgtttgatgc cgccaacctg gtgatgctgt atctgcttgg cgtggtggta
     6361 gtggcgctat tttatggacg ctggccttcg gtggttgcta ccgtcattaa tgtggtgagt
     6421 ttcgatctct tttttatcgc cccacgcggc acgctcgccg tctctgatgt gcaatatctg
     6481 ctgaccttcg cggtgatgtt aaccgtcggg ctggtgatcg ggaaccttac tgctggcgtg
     6541 cgttatcagg cgcgggtagc ccgttaccgc gagcaacgca cacggcactt atatgaaatg
     6601 tcgaaagctc tggcggtggg ccgcagtccg caggacatcg ccgccaccag cgaacaattt
     6661 attgcctcca cgtttcatgc ccgcagtcag gtgttgttgc ccgatgacaa cggtaaattg
     6721 cagccgttaa cacattcgca aggaatgacg ccatgggacg atgccatcgc gcagtggagt
     6781 tttgataaag gcctgcctgc gggtgcgggc accgacacgt tacccggcgt gccgtaccag
     6841 attttaccgt taaaaagcgg tgagaaaacc tacggactgg tggtggtgga gccggggaat
     6901 ctgcgccagt tgatgatccc ggaacagcag cgcctgctgg agacgtttac gctgttagtc
     6961 gccaatgccc ttgagcggct gacactgacc gccagcgaag aacaggcgcg gatggcaagc
     7021 gaacgtgaac agatccgcaa cgccctgctg gcggcgcttt cgcatgattt acgcacgccg
     7081 cttacggtgc tgtttggtca ggcagaaatc ttaacgctcg atctggcaag cgaaggatca
     7141 ccccacgccc gccaggccag cgagattcgt cagcatgtgc tgaacactac ccgactggtg
     7201 aataatctgc tcgatatggc gcgaattcag tccggcggct ttaatttgaa gaaagagtgg
     7261 ttaacgctgg aagaagtggt cggcagcgcg ctgcaaatgc tggaaccggg tttattgtcg
     7321 cccatcaatc tttctctgcc agaaccgctg accttaatcc acgttgacgg gccactcttt
     7381 gaacgggtgc tgattaatct gctggagaac gcggtgaaat atgcaggtgc gcaggccgaa
     7441 attggtatcg atgcccacgt tgagggcgaa aatctacaac tggatgtctg ggataacggc
     7501 cccggtcttc cgccaggcca ggagcagacg atattcgata agtttgctcg tgggaataaa
     7561 gagtcggcag tgccgggtgt agggcttggg ttggcaattt gtcgggcgat agtggatgta
     7621 cacggcggca ccattaccgc gttcaaccga ccggaaggtg gtgcctgttt tcgtgttaca
     7681 cttccccagc aaaccgctcc tgaacttgaa gaatttcatg aggatatgtg acaaacgttc
     7741 tgattgttga agatgaacag gctattcgtc gctttctgcg cacggcgctg gagggcgacg
     7801 gtatgcgcgt ctttgaggcc gaaacgctgc aacgcggctt gctggaagcg gcaacccgta
     7861 agccagattt gattattctc gatctcggcc tgcccgatgg tgatgggatt gagtttatcc
     7921 gcgacctgcg ccagtggagc ccggtgccgg tgattgtgct ttccgcacgc agcgaagaga
     7981 gcgacaaaat cgccgcgctg gatgccggag cggatgatta tctgagtaag ccgtttggca
     8041 ttggcgaatt gcaggcccgt ctgcgcgtcg ctttacgccg ccactccgcc accgccgcgc
     8101 ccgatccgct ggtgaaattt tccgatgtta ccgtcgattt agccgcccgc gtgatccatc
     8161 ggggcgagga agaggtgcat ctcacaccaa ttgagtttcg cctgctggcg atgctgctca
     8221 acaatgccgg aaaagtgctc acccagcgcc agctccttaa ccaggtgtgg ggaccaaacg
     8281 cggtcgaaca cagtcattat ttgcgtattt atatggggca tctgcgacaa aaactggaac
     8341 aggatcccgc tcgcccccgc catttcatta ctgaaaccgg tattgggtat cggtttatgt
     8401 tttgaatatt aattttaata catcatgcct tttattaatt aaagccgtaa taataaatac
     8461 ggctttttat cttaaactac acacaaaaat aacaattcaa tattttatat tactgagtaa
     8521 aaagctcatc attaaataaa ttaagattga tcatttttta ttgatcacct tcacagttca
     8581 accgtatttc ctggatagaa tatcttcacc ttcattcaca tcaggaaagg taaattaaat
     8641 ggaaaataac agccgcacta tgccccatat aaggcggaca actcatatta tgaagtttgc
     8701 tcatcgcaat agcttcgact ttcacttctt caatgcccgt tagtctaccg actaagggca
     8761 cttcagcgta caggtcttcc tgactctctg tattacaggc atatgcctgt attccgcagt
     8821 gctcattctc tgttaaccct tgtattatca gccaccggac tggtaagggt ttctgcattc
     8881 tgaaaaaagc aatctacctg atttatttat cagcggggta actttgcttt tttccggcac
     8941 gatcgatttc tcattcgaga aattgaggac ctgctattac ctaaaataaa gagatgaaaa
     9001 atgtcaaaat taaaaattgc ggttagtgat tcttgcccgg actgttttac cacgcagcga
     9061 gaatgtatct acattaatga aagtcgtaat atcgatgtgg cggcaatagt tttatcgctc
     9121 aacgatgtta catgcggaaa actcgatgaa atcgatgcca cgggttatgg catcccggta
     9181 tttattgcta ctgaaaatca agaacgtgta cccgcagagt atttgccccg tatttcgggt
     9241 gtctttgaga attgcgaatc gcgacgagaa ttttatggtc gtcagttaga aaccgctgcc
     9301 agccattatg aaactcaact gcgcccacct ttcttccgcg cactggtcga ttatgtcaat
     9361 caaggtaaca gcgcgtttga ttgccctggt catcagggcg gtgaattttt ccgtcgccat
     9421 ccggcgggga atcagtttgt ggaatacttt ggtgaggcgc tgttccgtgc tgacttgtgc
     9481 aacgccgacg tagcgatggg cgatctgctg attcacgaag gcgcgccatg cattgcacag
     9541 caacatgcgg ctaaagtctt taatgccgat aaaacctatt tcgttttaaa cggtacttca
     9601 tcttctaata aagtggtctt aaacgcattg ctgacgccgg gtgttctggt gctgtttgat
     9661 cgcaataacc acaaatctaa ccaccacgga gcgttgctac aggctggtgc aacaccggtt
     9721 tatctggaaa cggcacgtaa cccgtatggc tttatcggtg gcattgatgc gcactgtttt
     9781 gaagaaagtt acctgcgtga gctgatcgcg gaagtcgcac cgcagcgggc aaaagaggct
     9841 cgtcctttcc gcctcgccgt tattcagcta ggcacttacg acggtacgat ttataacgcc
     9901 cgtcaggtgg tggataaaat tggtcatctg tgtgactaca tcctctttga ctccgcatgg
     9961 gtcggctatg agcagtttat cccgatgatg gcggactgtt cgccgctgtt gctggatctt
    10021 aatgagaacg atccgggtat tctggttacg caatccgtac ataaacagca ggctggtttt
    10081 tctcaaactt cacaaatcca taaaaaagac agccacatca aagggcaaca gcgttatgta
    10141 ccgcacaaac gcatgaacaa cgcctttatg atgcatgcct ccaccagccc gttctatccg
    10201 ctgtttgccg cactggatat caacgccaaa atgcatgaag gtgtcagcgg tcgtaatatg
    10261 tggatggatt gtgtagtaaa tggcattaat gcccgcaaac tgatcctcga taactgtcag
    10321 catattcgtc cgttcgtacc tgaacaggtg gatggtaaac cctggcagtc gtatgaaaca
    10381 gcgcaaattg cggttgatct gcacttcttc cagtttgtac caggggaaca ctggcattcc
    10441 tttgaaggct atgcagagaa tcaatacttt gttgatccgt gcaaactgtt gctgacaacc
    10501 ccaggtattg atgcacgtaa cggcgaatat gaagcgttcg gtgtacccgc gacgattctt
    10561 gctaatttcc tgcgcgaaaa tggcgtagtg ccggaaaaat gcgatcttaa ctccatcctc
    10621 ttcctgctga ctccagcaga agatatggcc aaacttcagc aacttgttgc cctgctggta
    10681 cgcttcgaaa aactgctgga atctgatgcg ccgctggcgg aagtgctacc ttccatccac
    10741 aaacagcatg aagagcgcta cgccggttat acccttcgtc agttgtgcca ggaaatgcat
    10801 gatttgtatg cccgccacaa cgtgaaacaa ctgcaaaaag agatgttccg taaggaacac
    10861 ttcccacgcg tcagcatgaa tccgcaagaa gctaactacg cctatttacg cggtgaagtg
    10921 gagctggttc gtctgccgga tgcagaaggc cgtatcgctg cagaaggtgc gcttccttat
    10981 cctccgggtg tgctgtgtgt tgttccgggt gaaatctggg gtggtgctgt tctgcgttac
    11041 ttcagcgctc tggaagaagg gatcaacctg ctgccaggtt ttgcaccgga gctgcagggt
    11101 gtctatatcg aagaacatga tggtcgtaag caagtttggt gctatgtcat caagcctcgt
    11161 gatgcgcaaa gcaccctgtt gaaaggggaa aaattatgag tcaggctaaa tcgaataaga
    11221 tgggcgtcgt tcagttaacc atactgacga tggtcaacat aatgggctcc ggtatcatca
    11281 tgctgccgac aaagcttgcc gaagtcggga caatctcaat tatttcctgg ctggtgacag
    11341 ccgtaggctc aatggcactg gcatgggcat tcgcaaaata cggtatgttc agccgtaaat
    11401 caggtggtat gggcggttat gccgagtatg ctttcggtaa atccggtaac tttatggcga
    11461 actataccta cggcgtctca ctgctgattg ctaacgtcgc gattgctatt tcggcggttg
    11521 gttacggcac cgaactgctc ggcgcgagtt tgtcgccagt gcagattggt cttgcgacca
    11581 tcggggtgct gtggatttgt accgtggcta actttggtgg tgcgcgcatt accgggcaaa
    11641 tcagtagcat taccgtg
//
LOCUS       DAJVTL010000128        11520 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.130, whole genome shotgun sequence.
ACCESSION   DAJVTL010000128 DAJVTL010000000
VERSION     DAJVTL010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11520
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.130"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..862
                     /locus_tag="OQQ26_003448"
                     /pseudo
     CDS             1..862
                     /locus_tag="OQQ26_003448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415113.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
     gene            939..1187
                     /locus_tag="OQQ26_003449"
     CDS             939..1187
                     /locus_tag="OQQ26_003449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 domain-containing protein"
                     /protein_id="HCS1858791.1"
                     /translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTTFHL
                     MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRCFSLAD"
     gene            1252..1620
                     /locus_tag="OQQ26_003450"
     CDS             1252..1620
                     /locus_tag="OQQ26_003450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HCS1858792.1"
                     /translation="MDKQSLHETAKRLALELPFIELCWPFGPEFDVFKIGGKIFMLSS
                     ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND
                     SWNLVVDGLAKRDQKRVRPG"
     gene            1714..2367
                     /gene="nfsB"
                     /locus_tag="OQQ26_003451"
     CDS             1714..2367
                     /gene="nfsB"
                     /locus_tag="OQQ26_003451"
                     /EC_number="1.5.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
                     /protein_id="HCS1858793.1"
                     /translation="MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQ
                     PWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAMDDAWLKLVVDQE
                     DADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD
                     AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV"
     gene            2475..3722
                     /gene="ybdG"
                     /locus_tag="OQQ26_003452"
     CDS             2475..3722
                     /gene="ybdG"
                     /locus_tag="OQQ26_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel YbdG"
                     /protein_id="HCS1858794.1"
                     /translation="MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
                     LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
                     AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
                     LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEY
                     LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
                     FGLRLHQSPTGNDIRSLAGAFKQ"
     gene            complement(3790..5166)
                     /gene="pheP"
                     /locus_tag="OQQ26_003453"
     CDS             complement(3790..5166)
                     /gene="pheP"
                     /locus_tag="OQQ26_003453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HCS1858795.1"
                     /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
                     IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
                     SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
                     EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI
                     MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSN
                     SSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
                     VSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
                     RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
                     AFKTLRRK"
     gene            complement(5268..8411)
                     /gene="cusA"
                     /locus_tag="OQQ26_003454"
     CDS             complement(5268..8411)
                     /gene="cusA"
                     /locus_tag="OQQ26_003454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter permease
                     subunit CusA"
                     /protein_id="HCS1858796.1"
                     /translation="MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSD
                     VQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTD
                     PYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQ
                     DWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAG
                     GSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIA
                     ELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRA
                     IDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIIMHFQGLNANIMS
                     LGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPAL
                     FISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGK
                     IPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQIN
                     EGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMV
                     ETTIQLKPQDQWRLGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIG
                     IKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTV
                     ADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITL
                     ADVADVKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIAEKVQLKPGTSV
                     AFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWL
                     LWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAEPSLNNPQTFSEQKLDEA
                     LYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFI
                     IPAAYKLMWLHRHRVRK"
     gene            complement(8423..9646)
                     /gene="cusB"
                     /locus_tag="OQQ26_003455"
     CDS             complement(8423..9646)
                     /gene="cusB"
                     /locus_tag="OQQ26_003455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     adaptor subunit CusB"
                     /protein_id="HCS1858797.1"
                     /translation="MKKIALIIGSMIAGGIISAAGFTWFDQAEPHAEKTPTAERKILF
                     WYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRG
                     PLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVE
                     AQSEYLLLRETGGTATQTEGILERLRLAGMPEADIHRLIATQKIQTRFTLKAPIDGVI
                     TAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTL
                     TIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASEPMLLIPSQALID
                     TGNEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS
                     GALERMRSESATHAH"
     gene            complement(9662..9994)
                     /gene="cusF"
                     /locus_tag="OQQ26_003456"
     CDS             complement(9662..9994)
                     /gene="cusF"
                     /locus_tag="OQQ26_003456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     metallochaperone CusF"
                     /protein_id="HCS1858798.1"
                     /translation="MKKALQVAMFSLFTVIGFNTQANEHHHETMSEVQPQVISATGVV
                     KGIDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSL
                     LQDIKVSQ"
     gene            complement(10018..11400)
                     /gene="cusC"
                     /locus_tag="OQQ26_003457"
     CDS             complement(10018..11400)
                     /gene="cusC"
                     /locus_tag="OQQ26_003457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter outer
                     membrane channel CusC"
                     /protein_id="HCS1858799.1"
                     /translation="MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLNQNGLVN
                     AADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVREAQAQYRLADADRYPQL
                     SGEGSGSWSGNLKGNTATTRELSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRA
                     VHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQAR
                     GVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQI
                     LLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNF
                     IPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQIS
                     AQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISL
                     YTALGGGWQQ"
BASE COUNT         2744 a         3176 c         2829 g         2771 t
ORIGIN      
        1 cgggcaattt tcagcgatgc agaaagtcgt attgcaggca gccgcagacc atcatctaga
       61 aatttgcgac ggtggcacgc acccgtttca gaaatggcag catcaggagg tatgcgacaa
      121 cgaacgctat caacgaacgc tggaaaactt tggctatctc atccagcagg cgaccgtttt
      181 tggtcagcat gtccatgttg gctgtgccag tggcgatggc gccatttatt tgctgcacgg
      241 cttgtcacgg tttgtgccgc actttatcgc cctttccgcc gcgtcgccat atatgcaggg
      301 aacggatacg cgttttgcct cctcacgacc gaatattttt tccacctttc ctgataatgg
      361 cccgatgccg tgggtcagta actggcaaca atttgaagcc ctgtttcgct gcctgagtta
      421 caccacgatg atcgacagca ttaaagatct gcactgggat attcgcccta gcccccattt
      481 tggtacggtg gaagttcggg tgatggatac cccgttaacc cttagccacg cggtaaatat
      541 ggcaggatta attcaggcca ccgcccactg gttactgacg gaacgcccgt ttaaacatca
      601 ggagaaagat tacctgctgt ataaattcaa ccgtttccag gcctgccgct atgggctgga
      661 aggcgtcatt accgatccgc acaccggcga tcgtcgaccg ctaacggaag acaccttgcg
      721 attgctggaa aaaatcgccc cttcagcaca taaaattggc gcatcgagcg caattgaagc
      781 actgcatcgc caggtcgtca gcggtctgaa tgaagcgcag ctgatgcgcg atttcgtcgc
      841 cgatggcggc tcgctgattg ggccggtgaa taagccggga attgccttac agaagaatat
      901 ccctgacaat ggtgttttaa cttacattta acaatgttat gaaacaccct ttagaaacct
      961 tgaccaccgc agcaggcatt ttgctgatgg ctttcctctc ttgcctgctg ctgcccgccc
     1021 ccgcactggg gcttacgctg gcacaaaaac tggtgaccac gttccatctg atggatctta
     1081 gccagcttta cactttattg ttttgtctgt ggtttttagt gctgggtgct attgagtatt
     1141 ttgttctgcg ctttatctgg cgacgctgct tctcgctggc ggattaaacg tcgattatcg
     1201 ccgaacttcg cggcatactt tgcttattct ccttcgccta aaggaacgtt tatggataag
     1261 caatcactgc acgaaacggc gaaacgcctg gcccttgagt taccctttat cgagctttgc
     1321 tggccttttg gcccggagtt cgatgttttt aaaattggcg gcaaaatttt tatgctgtcg
     1381 tcggagctgc gcggcgtccc ctttatcaat ctgaagtccg atccacaaaa atccctgtta
     1441 aatcagcaaa tatacccaag cattaagcca gggtatcaca tgaataaaaa gcactggatt
     1501 tcggtgtatc ccggcgagga aatctccgaa gcgttacttc gcgatctgat caacgattcg
     1561 tggaatctgg tggttgatgg tctggctaaa cgcgatcaaa aaagagtgcg tccaggctaa
     1621 agcggaaatc tatagcgcat ttttctcgct taccatttct cgttgaacct tgtaatctgc
     1681 tggcacgcaa aattactttc acatggagtc tttatggata tcatttctgt cgccttaaag
     1741 cgtcattcca ctaaggcatt tgatgccagc aaaaaactta ccccggaaca ggccgagcag
     1801 atcaaaactc tactgcaata cagcccatcc agcaccaact cccagccgtg gcattttatt
     1861 gttgccagca cggaagaagg taaagcgcgt gttgccaaat ccgctgccgg taattacgtg
     1921 ttcaacgagc gtaaaatgct tgatgcctca cacgttgtgg tgttctgtgc aaaaaccgcg
     1981 atggacgatg cctggctgaa gctggttgtt gaccaggaag atgccgatgg ccgctttgcc
     2041 acgccggaag cgaaagccgc gaacgataaa ggtcgcaagt tcttcgccga tatgcaccgt
     2101 aaagatctgc atgatgatgc agagtggatg gcaaaacagg tttatctcaa cgtcggcaac
     2161 ttcctgctcg gcgtggcggc gctgggtctg gacgcggtac ccatcgaagg ttttgacgcc
     2221 gccatcctcg atgcagaatt tggtctgaaa gagaaaggct acaccagtct ggtggttgtt
     2281 ccggtaggtc atcacagcgt tgaagatttt aacgctacgc tgccgaaatc tcgtctgccg
     2341 caaaacatca ccttaaccga agtgtaattc tctcttgccg ggcatctgcc cggctatttc
     2401 ccctcagatt ctcctgattt gcataaccct gtttcagccg tcatcatagg ctgctgttgt
     2461 ataaaggaga cgttatgcag gatttaatat cccaggttga agatttagcg ggtattgaga
     2521 tcgatcacac cacctcgatg gtgatgattt tcggtattat ttttctgacc gccgtcgtgg
     2581 tgcatattat tttgcattgg gtggtactgc ggaccttcga aaaacgtgcc atcgccagtt
     2641 cacggctttg gttgcaaatc attacccaga ataaactctt ccaccgttta gcttttaccc
     2701 tgcaggggat tatcgtcaat attcaggcgg tattctggct gcaaaaaggc accgaagcgg
     2761 cagatattct gactacctgc gcgcagttgt ggatcatgat gtatgcgctg ctttcagtct
     2821 tctcgttgct ggatgttatt ttgaatctgg cgcagaaatt cccggcggca tctcagttac
     2881 cgctgaaagg gatatttcag gggattaaac tgatcggcgc gattctggtc ggcattttga
     2941 tgatctcgct gctgattggt cagtcgccag cgattctgat cagcggtctt ggtgcaatgg
     3001 ctgccgtgct gatgttggta tttaaagatc cgattcttgg tctggtggca ggtattcagc
     3061 tttccgcgaa cgatatgctg aaactgggcg actggctgga gatgccgaaa tacggcgcgg
     3121 atggcgcggt gatcgatatt gggttaacca ccgtcaaagt gcgtaactgg gacaatacca
     3181 ttaccactat tcccacttgg tctctggttt ctgactcctt taaaaactgg agcgggatgt
     3241 cagcatctgg cgggcgacgt attaagcgca gcatcagtat tgatgtcacc agtattcgtt
     3301 ttcttgatga agacgaaatg caacgtctga ataaagcgca tttgttaaag ccttatttaa
     3361 ccagccgcca tcaggaaatt aatgagtgga atcgccagca aggttctacg gagtcagtat
     3421 taaacctgcg ccgaatgacc aatattggaa cctttcgtgc ctatctgaac gaatatctgc
     3481 gtaaccatcc gcggattcgt aaagatatga ctttaatggt acgccaactg gctccaggtg
     3541 ataacggttt accgctcgag atctatgcgt ttaccaacac cgtggtgtgg ctggaatatg
     3601 aaagcattca ggctgatata ttcgatcaca tatttgcgat tgtcgaagag tttggtctgc
     3661 gacttcatca gtcgccaacc ggcaatgata ttcgctctct ggcgggtgca tttaagcagt
     3721 aattaaaaaa accgctctca tcgaatggat gagagcggac atcgttttgt cggatgtagc
     3781 gtgaatgcct tatttccgac gcagcgtttt aaatgccaca aacaggaata caatccacac
     3841 cggcagcagg atcgctgaca agcgcatatc atccatcgtg cacatcagca gcaaaatcat
     3901 gccgaggaag gcaatgcaga gatagtttcc gaacggatag agcagcgcct taaactgtgt
     3961 ttcacgcccc tgacgtcgca tcgctgcacg aaaacgcaga tgcgccagac agatcataat
     4021 ccagttcaac agcagcgttg ctaccaccag cgccatcagc agaccaaacg ctttttgcgg
     4081 cagcagatag ttgattaaca ccaccagcga agtgatcgct ccggaaagca tcagcgagtt
     4141 aatcggcaca ccgcgacggc tgacgcgagt caaaaacttc ggcgcattac cctgcacaga
     4201 aaggccaaac agcatgcggc tgttagagta aaccccgctg ttatacactg acagcgatgc
     4261 taccagaatg acgaagttca gcgcagaagc taccacgttg ctgtcgagat tatggaaaat
     4321 catcacaaac gggctactgt tggatttcac ttccacccac ggatagagcg ccagtaaaac
     4381 caccagtgaa ccgatgtaaa acagcaggat gcgatacacc acctgattta ccgcttttgg
     4441 aatgcttttt tccggatcgc gcgcttcagc ggcagtaatc ccaatcagct ccagaccgcc
     4501 gaaggagaac ataattaccg ccagcgacaa aatcagccca ttccagccgg tggcgaagaa
     4561 accaccgtag cgccagaggt tgtcgatact ggctttctcg ccgccgtgac cagaaaacag
     4621 cagccacagg ccaaagccga tcataccgat gatcgccagc actttaatca gcgcaaacca
     4681 gaactcggtt tcgccatata agcgcacgtt caccaggtta acggcgttga tgataataaa
     4741 gaaggcggca gcccaaatcc acgttggaac atccgggaac cagtactgca tatagatgcc
     4801 cgcagcggtc agctctgcca ttcccaccag cacgaacatt acccagtagt tccagccaga
     4861 gaggaagccc gcaaacggtc cccagtattt ataggcaaag tgggcaaatg aaccggatac
     4921 cggctcttcg accaccatct cgccgagctg gcgcataatc aggaaagcga tgatcccggc
     4981 gacgccgtag cccagcaata cagccggacc cgccatctga atcgccgggc caatgccaag
     5041 aaacagacca gtaccaattg cgccacccag cgcaatcagt tgaatatgac ggttatgtaa
     5101 tccgcgatga agcgtcggct cttgattcga cgcagtatct tccgatacgg ttgacgcgtt
     5161 tttcacgcct ttcccctgtg tgtctttttt gttgaggggc accttttaac atttagtgcc
     5221 catcgtcgca agacacaatc cacacggtta aacggggtat cctgctttta tttccgtacc
     5281 cgatgtcggt gcagccacat cagcttatac gccgccggga taataaacag cgacagcaaa
     5341 ggtgcggtga tcatgccgcc aatcatcggt gcggcaatcc ggctcatcac ctctgaacca
     5401 gcccccgttc cccacagaat cggcagcaga ccggcgataa tcaccgccac cgtcatcgct
     5461 ttcgggcgca cgcgcagtac cgcgccgtga tacaacgcct catccagctt ctgctcactg
     5521 aatgtttgcg gattattcaa cgacggctcg gcctctatgg cgtgacgtaa atacatcagc
     5581 atcaccacgc caaattcggc ggcgaccccg gcaagggcaa taaaaccggt gcccgtcgcc
     5641 acggaaagat gaaagcccat ccaccacagc aaccagatgc cgcccaccag cgcaaacggt
     5701 acgctgctga taatcagcaa cgcttcgccc acccgacgga acgccagata caacagcacg
     5761 aagataatca tcaacgtcat cggcaccatg agtttaagct tatggttggc gcgctccagt
     5821 agctcgaact gcccggagaa tgccacgctg gtgcccggtt ttaactgcac tttttcagct
     5881 atcgcttttt gcaaatcgtg aaccaccgac accatgtcac gatcgcgggc atcgatataa
     5941 atccagctcg tcgggcgcgc attctcggtt ttcagcattg acggtccggt agagacttta
     6001 acgtcggcca cgtctgccag ggtgatttgc tgcttcatcg gcgtcagaat cggcagctgg
     6061 cgcagtgcct gcggactatc gcgccagctt tgcggataac gcagattaat tggataacgg
     6121 gcaattcctt ccaccgtttc gccaaccatc gccccgccca cagcagaagt cacaaacaac
     6181 tgcacatccg ccaccgtcat accgtaacgc gcggcttttt cacggttaat ctcaacgttg
     6241 atatagcgcc caccttccag ccgctcggca agcgcagaag ctacgcctgg caccgttcgc
     6301 gccacttctt caatttgctc agccatcgcg tcgatatccg ccagcacagt gccggaaact
     6361 ttaatgccga tggggctttt aatgccggtt gagagcatat cgatacggtt acgaattggc
     6421 ggcacccaca gattcgccag ccccggcaga cgcacggtgt tatccagttc ctcaatgatt
     6481 ttgtccattg tcatgcctag ccgccactga tcctgtggct taagctggat ggtcgtttct
     6541 accatctcca gcggagcaga atcggtggcg gtttccgctt tcccggtttt gccaaatacc
     6601 cgcgccactt caggtacgct cataattagc ttgtcggttt tttgcagcat actcgccgcc
     6661 tctgctgcgg aaatccccgg cagcgtcgat ggcatataca acaagtcgcc ttcattgatc
     6721 tgcggtaaaa attccccgcc aactttattg agcggccaga gaaccgtcag caccgaaagc
     6781 gccgccacca gcagcgtggt tttcggccag tgcagtactt tcagcaacag cggatgataa
     6841 acacgaatca aaaagcgatt gagcgggtta ctgctttccg gcggaatttt gccacggatc
     6901 cagtagccca tcaggatcgg gatcaccacg atcgccagca gcgccgcacc cgccatcgca
     6961 tacgttttgg tgaacgccaa cgggccaaac agacgccctt cctgcccttc cagggtgaag
     7021 atcgggataa acgacaacgt gataatcagc agactgataa atagcgccgg ccccacttca
     7081 acagacgcat cggtgatcac ctgccagcgc gttttattat ccagcgtggc gtcaggatgc
     7141 tggtgctgcc actcttccag ccgtttatgc gcattctcga tcatgacgat agcagcatcg
     7201 accatcgccc cgacggcaat cgcaatgcca cccaacgaca taatattggc attcagtccc
     7261 tggaagtgca tgataataaa agcaatacac aaccccagcg gcaacgaaat aatcgccacc
     7321 agcgccgagc gcacatgcca gagaaacagc gcacagacta ccgccaccac aataaactct
     7381 tccagcaact tgccgctgag gttgtcgatg gcgcggtcaa tgagctggct gcgatcgtat
     7441 gttgtaacta tctccacgcc ttccggcaga ctacttttca gcgtttccag tttgtccttc
     7501 acggcggcga tcacttctcg ggcgtttttg ccggagcgca ggatcaccac cccgcccgcc
     7561 acttcgcctt cgccattcag ttcggcaatg ccccggcgca tctccgggcc aatctggacc
     7621 ttcgcaacat cacgcagata aacgggcacg ccattttcac tggcttttaa aacgatgtga
     7681 ttaaagtcgt cgagcgtttg cagatagccg ctggcgcgca ccatatattc cgcttccgcc
     7741 agttcgatcg acgaaccgcc cgcttcctgg tttgaagcat ccagcgcgct ttttacttcg
     7801 gctagactga tgccatattg cgccaggcgc tggggatcga taaccacctg atactctttc
     7861 accacgccgc ccaccgacgc cacttccgca acgtcaggga tggtttttag ctcatatttg
     7921 agaaaccagt cctgcaatga gcgtaaatcg gccagatcgt gcttaccgct gcgatccacc
     7981 agtgcatatt catagatcca gccaacaccc gtggcatctg gccccagctc ggcgctgact
     8041 cccgcaggca gcttaccctg tacctggttg aggtactcca gcacccgcga acgcgcccag
     8101 tacggatcgg taccatcttc gaaaatgaca tacacataag agtcgccaaa ctgcgagaaa
     8161 ccacgcacag tcttcgcgcc aggcaccgac aacatggtgg tggttagcgg ataagtcacc
     8221 tgattttcaa cgatttgcgg tgcctgaccg ggatagctgg ttttaataat cacctgcaca
     8281 tcggagagat ccggcagcgc atccactggc gtgttaatga tggtccaggt gccccagatg
     8341 ctcagaaaca acgcgcccat cagcaccaga aaacggttcg ccaccgagcg acgaataatc
     8401 cattcaatca ttggttattc cctcaatgcg catgggtagc actttcagag cgcatccgct
     8461 ccagtgcgcc agaaatattg gcttcggaat caatcaggaa caggccgctg gaaaccacct
     8521 tttcaccttc cgccagacca gagcgtaatg cggtgacacc ttgcgatgcc tggaaaacgg
     8581 caacgcgttt cggtacaaag cgtccgtcgg catcaacggt aatcacccgc tgttcgttgc
     8641 cggtatcaat cagcgcctgt gacggaatga gcagcatcgg ttcgctggcg gtattgagtt
     8701 gcaaccaggc gttcatgccc ggttttagcg cctcgtcggc gttgtcgact tccagacgca
     8761 gttgtagcgt gcgggtcgcg gcatccacgc caggtagcag ggtccatttg cggatagtga
     8821 gtgttttatc aggtcgcgcc ggaacggtga gcgtaaactg cgaggcatct ttcaccagcc
     8881 aggcgataga ctccgggatc gcagcagtga cccacaccgg gtccataccc tgaattttcg
     8941 ctaccacatt atctttggcg atattcattc ccgcgcgcag atcaaacgcg gtgatcacgc
     9001 catcaatggg cgctttgagc gtaaagcgag tctggatttt ttgcgtggcg atcaggcggt
     9061 gaatatccgc ctccggcatt cccgccagtc gcagccgctc aagaatgcct tcagtctggg
     9121 tcgccgtacc gccggtttcg cgcagcagta aatactcact ctgcgcttcc acccagtcgg
     9181 gaatggtcag gtcgagaagc ggtgtgccct tttgtacttt atcgcccacg gtaagcggat
     9241 acaccttgtc gataaacccg gcagcgcgag cctgcacaat ggcatactga tactcgttgt
     9301 aactgacatt cgccgggaaa ctctgggcaa aagtcagcgg cccgcgcgtg acggtagccg
     9361 ttttcacccc cagattctgc gtctgagtcg ggtcaatgcg cacaccagac gcagaactct
     9421 cttcatcggc atatttcggc accagatcca tatccataaa cggcgattta cctggtttat
     9481 cgaaccgcgt attgggatac atcgggtcgt accagaataa gattttacgt tctgcggtcg
     9541 gcgttttttc tgcgtgcggt tccgcctggt caaaccaggt aaaacctgcc gcagaaataa
     9601 taccgcccgc gatcatgctg ccgataataa gcgcgatttt tttcatctca ttaaacctgg
     9661 gttactggct gactttaata tcctgtaata aagaaaggtt gccctgctgg acaaaattaa
     9721 acgccacttt gtcgccggtt ttaatttcac tcattttcgt ctgcggggtg atggtaaagc
     9781 gcatggtcat ctcgggccag ttcacggctg caatcggatc gtgatggatg gtgatttttt
     9841 tgctttccag atcaatacct tttactacgc cagtggcgct aataacctgt ggttgtactt
     9901 cgctcatggt ttcatgatga tgttcgttag cctgggtatt aaagccaata acggtaaaca
     9961 gactgaacat tgcgacttgc agtgcttttt tcatttattc tctcctggag ttaaaaatta
    10021 ttgctgccaa ccgccaccaa gtgcggtata taaagaaatt tcgttaacct gacgggcata
    10081 attcaggtca agtaaggttt gtcgggttgc aaataaagaa cgctcggcat ccagcacttc
    10141 cagataactt accgcgccgt gctgatataa tgcccgcgcc cgttgcaaag taatttgcag
    10201 cgacgccaga taacgctgct gggcgctgat ttgatcgttc aggctttgac gtaatgccag
    10261 cgcatctgcc acttctttaa aggcgttctg gattttctgt tcataattca ctaccgactg
    10321 ctgctggcga atttcggcga tatccagatt ggcctggttg cgtccggcat taaaaatggg
    10381 gatctcaatt ttaggaataa aattccacat cccgctgctg gcgttaaata atgacgacag
    10441 atcgctgctg gcggttgata ttccgctggt caggcttata gatggaaaaa atgccgcgcg
    10501 tgcggcccca atattggcat tagccgccat taacgcgtgt tcagcttcca taatatccgg
    10561 gcgctgcaat aagatttgcg acgacaagcc cgccggtaat ttaacgcttt gcaggctgtc
    10621 gctgtttact gtctgcgctt gcggcagctt gccgtagctt cccaataaca gttgcaatgc
    10681 attattcgcc tgcgccagtt ccccctgacg tttagcgatg tcactgcggg tactttctat
    10741 caccccgcga gcctgttcca gcgccagaac attgctgcta ccggtcaaca gttgtttttc
    10801 gacaaacgca tatgactgct gatagttacg cagcgtttct tcggctattt gcaattgcgc
    10861 atacgccagt tgctgattga aataactttg cgcgacatta gaaaccagca gaatatgcac
    10921 cgcgcgctga gcttcctccg tggctaaata attttgtcgc tcggcttcgc tcatattctt
    10981 taagcgaccg aaaaaatcga ggtcaaagct ggcgttaagg ccggtcgaga gctcccgtgt
    11041 cgtggcggta ttccctttaa gattgccgct ccagctgccg ctgccctcgc cactgagctg
    11101 tgggtagcgg tcagcatcgg ccagacgata ttgcgcctgc gcttcccgta ctttcagcgt
    11161 cgccatgcgc aaatcccggt tattcaccag cgcctcgcta atcagcgtct tcacctgatt
    11221 atcaacaaaa aaggtgcgcc agcccgcgtt ctggtagtta tctgctgcgt taaccaggcc
    11281 gttctggttg agtgagaact gctgcggcac gggcattgcc gggcgctgat aatccggtgc
    11341 cagtgaacaa ccggttagcg caagggccac acaaaatggc agaagtttac aaggagacat
    11401 aggctcataa tttctggtga ttttatgtcg ccaactttac ccgccagcct ctgattttcc
    11461 ggtgacagga aaatgacaaa attgtcattt tgccaataag cgattgccat ctgatcccgc
//
LOCUS       DAJVTL010000129        11509 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.131, whole genome shotgun sequence.
ACCESSION   DAJVTL010000129 DAJVTL010000000
VERSION     DAJVTL010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11509
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.131"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(55..1338)
                     /gene="aroA"
                     /locus_tag="OQQ26_003458"
     CDS             complement(55..1338)
                     /gene="aroA"
                     /locus_tag="OQQ26_003458"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HCS1858800.1"
                     /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
                     LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
                     AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
                     NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
                     HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
                     ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
     gene            complement(1409..2497)
                     /gene="serC"
                     /locus_tag="OQQ26_003459"
     CDS             complement(1409..2497)
                     /gene="serC"
                     /locus_tag="OQQ26_003459"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HCS1858801.1"
                     /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
                     EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
                     AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
                     ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
                     NIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
                     YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPLEGVKALTDFMVEFERRHG"
     gene            complement(2696..3388)
                     /locus_tag="OQQ26_003460"
     CDS             complement(2696..3388)
                     /locus_tag="OQQ26_003460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HCS1858802.1"
                     /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
                     VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMNAGEKQLCPRCANP
                     EWTKASRAKRVT"
     gene            3518..5278
                     /locus_tag="OQQ26_003461"
     CDS             3518..5278
                     /locus_tag="OQQ26_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706823.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HCS1858803.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFPLSENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLLLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
                     TLLLLAQEEDRQPLQYLNAFVRMYGADVVEAASAAMSGEAAFYGLQPVDSDLHAFAAH
                     QSLLKAYEKLQRAKAAFWAK"
     gene            5684..6541
                     /gene="focA"
                     /locus_tag="OQQ26_003462"
     CDS             5684..6541
                     /gene="focA"
                     /locus_tag="OQQ26_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HCS1858804.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANSQWGLNVLQTADHKVHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRENDHH"
     gene            6596..8878
                     /gene="pflB"
                     /locus_tag="OQQ26_003463"
     CDS             6596..8878
                     /gene="pflB"
                     /locus_tag="OQQ26_003463"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HCS1858805.1"
                     /translation="MSELNEKLATAWDGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKALEKVVGLQT
                     EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKYAQFTSLQADLENGVNLEQTI
                     RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDLLSYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQSM"
     gene            9070..9810
                     /gene="pflA"
                     /locus_tag="OQQ26_003464"
     CDS             9070..9810
                     /gene="pflA"
                     /locus_tag="OQQ26_003464"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HCS1858806.1"
                     /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
                     THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
                     CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
                     NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
                     LDGVKPPKKETMERVKGILEQYGHKVMF"
     gene            complement(9892..10482)
                     /locus_tag="OQQ26_003465"
     CDS             complement(9892..10482)
                     /locus_tag="OQQ26_003465"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H oxidoreductase"
                     /protein_id="HCS1858807.1"
                     /translation="MQSERIYLVWTHPRHDSLTAHIADAIHQRAMERKIQVTELDLYR
                     RNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDMLVVVFPLWWYSFPAMLKGYI
                     DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMSSYLGIED
                     ADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL"
     gene            10582..11490
                     /locus_tag="OQQ26_003466"
     CDS             10582..11490
                     /locus_tag="OQQ26_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1858808.1"
                     /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR
                     LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAAQV
                     AARIFLMPLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIG
                     PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI
                     ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQY
                     MSCGLRAFLDYVKTGQICQSQRHRPQ"
BASE COUNT         2968 a         2871 c         2690 g         2980 t
ORIGIN      
        1 atgtgccgac gttttgataa agaaagattt ggctatttat tgcccgttgt tcattcaggc
       61 tgcctggcta atccgcgcca gctgctcgaa ataatccgga aatgttttgg ccgtgcattt
      121 gggatcaaga atcgtcactg gtgtatctga caacgccacc agcgagaaac acatcgccat
      181 ccggtgatca ttgtatgtcg cgatctcggc aaagttcagt ttttccggtg gagtgatacg
      241 aatgtaatcg tgtccctctt caacttccgc accgacttta cgcagttctg ttgccatcgc
      301 aaacaggcga tcggtctctt taacacgcca gttatagata ttgcgcagcg tggtggtgcc
      361 ttttgcaaat aacgccgccg tggcaatggt catcgccgca tcgggaatat ggttcatatc
      421 catatcaata gcgttcagtt caccacgcgt gcaggaaata taatcatcgc cccagcaaat
      481 ggtcgcgccc attttttcca gcacatcagc aaagcgaata tcaccctgca tactgttacg
      541 tccaataccg gtcactttta cagtgccgcc tttgattgct gctgctgcca gaaagtaaga
      601 agccgaagat gcatcgcctt cgaccaaata agtacccgga gactgataag actgcccgcc
      661 ttttacgaca aattgttgat agtgctgatt ttcaatttca acaccaaacg tcttcatcag
      721 attgagtgtg atgtcgatat aaggtttaga aaccagatcg cctttaatac gaatcaccgt
      781 atcttccggc gcaagaggcg cagtcattaa cagtgcggtg aggaattggc tggaaacgga
      841 gccatcaacg tcaacgttgc cgccagtaaa gccgccctgt aaacgcaacg gcggataatt
      901 ttcttgttcc agataagtga tcttcgcccc gcccaggcgc agcgcatcca ccagatgacc
      961 aatcgggcgc tctttcatac gcggttcacc ggtcagcaca atatcattgc tacccagaca
     1021 aagagctgcc gccagcgggc gcattgccgt tccggcgttt ccgagaaaca actccagggc
     1081 accttctgcg tgtaatggac cgccgttacc gataatttcg caacgcgtac gatcggctga
     1141 aagcgtatag cttaccccta acgctgttaa tgcattcagc atatggcgca cgtcatcgct
     1201 atccagcaga ttggttaata ctgttttgcc gtgtgctaat gccgccagca ataaagcgcg
     1261 gttagaaacg ctcttggaac cgggcagatt aatagtgcca tcgacacgag cgatgggttg
     1321 taacgtcagg gattccatga actcaactct ctacaacaga aataaaaacc ccacaggctg
     1381 gctgtgggga ttaagcaaaa tttcggcatt agccgtgacg gcgttcgaac tcaaccatga
     1441 agtctgtcag cgctttaacg ccttccagcg gcatggcgtt ataaatggac gcacgcattc
     1501 cgccgaccac acggtgacct ttcagcgcat gaaggccagc agcaaaagac tcttcaagga
     1561 acaatttgtc aagcgcactg tccgccaact ggaacggcac gttcatccgc gaacggttag
     1621 ctttcgccac gtcattgcgg tagaaatcgc tgttatcaat caccccatat agcagttctg
     1681 ctttttgctg attgatttta tccatttcag ctacaccgcc gttcgctttc agccatttaa
     1741 agaccagacc agatagatac caggcaaatg tcggcggcgt gttaaacatg gagccgttat
     1801 cgttgaggat ggaataatcc agaatcgacg gacacgcgat attcgctttg cccagcaaat
     1861 cttcacgaac gatgacgatt gtcaggccag ccgggccgat atttttctgc gcgccagcgt
     1921 aaattacacc ataacggctg acgtcaatcg gacgggaaag aatggttgaa gagaagtcgg
     1981 cggcgaccac cacatctttg ccgaagtctg gcgtctcgtc gatggcgata ccgtcgatgg
     2041 tttcattcgg gcagtaatgc atataagccg cattatcaga gagttgccat tcacgcattg
     2101 gcttaaccgc gcgcagacca tcaacagtca ctttggcgtc aaagacatta ggcgtgcagt
     2161 attttttcgc ttctttaatg gcacttgccg cccagtaacc ggcatcaaca taatctgcgg
     2221 tggttttatc accgagaata ttcagcggta ccgcagcaaa ctgaccgcga ccaccgccat
     2281 ggcagaataa taccttgtag ttggagggga cattaagaag atcgcgaaaa tccttctcgg
     2341 cttcctctgc aacctgaatg aactctttgc cacggtgact cacttccatc accgacgtac
     2401 caagaccgtt ccagtcgcgc agttcctgtt gagcctgttt aagcacctct gccggtagca
     2461 ttgccggacc agaactaaaa ttgaagattt gagccatttc ccctcaccac gttgcgttgc
     2521 tattaacccg cggtcaatcg attgcgacca caggtaatac attattcctg tggctatcgg
     2581 ttttatcatt cagtgacaca catcgcaatg agtaaaaccg ttgagggcaa aaatgtggct
     2641 tgcaccacac aaaagaatct ctcggattat tagcaaaaag ccgatgtttt tactgtcagg
     2701 tcacccgttt tgcccgactt gccttcgtcc attctggatt tgcacagcgc ggacataatt
     2761 gtttttcccc cgcgttcata tgaatgattt cactacaacg aatgcaggca tagtccgccg
     2821 actccggcac cactttgtaa cgctgcgtac aatcactggg taaaataagt aaacccggtt
     2881 tcaccttgtc atcttcaaag aaatagacac tgatttgccc gttggtttcg agaattgcca
     2941 gacgtacctg ccccagctgc tccacgccac gcaatcgtag ctccataaag aactcaaatt
     3001 ccgtcatgtt ggagttattg agtttcgacc aggccagctc gccatcttca ataataacaa
     3061 ccggcttacc ttccagtaga tcttccagtt tttcactgtg cgccatcaac cacattacca
     3121 ggcggtataa caacgccaga gtgataaaga cgataagtac cggcaccatc ggcacatcat
     3181 cataaaacgc cacatctccc gccgctgaac ccagcgtgag aatgattaac acttcaaaca
     3241 gcgacatctg tcgcacaccg cgtcttccgg tcattttgag gaacaaaaaa accagtacaa
     3301 aggtataaag actacgtagt gcaacttcgc caaggaaatc aaaaggcact ttatcaaatg
     3361 ccatacggtg gagatcgaac gccttcattt ttatgctctt aacgtggttt atccgctaaa
     3421 agcatagtca acagttcatc ggcatggcgg cggtgatagc gcctttgaga taaaacccgt
     3481 attattgcgc gctttccgta cgactaaagt gattttcatg acgcaaacat ttatccccgg
     3541 caaagatgcc gctctggaag attccatcgc tcgcttccag caaaaacttt cagacctcgg
     3601 ctttcagatt gaagaggcct cctggctgaa tcccgtgcct aacgtctggt ctgtacatat
     3661 tcgcgacaaa gagtgcgcac tgtgttttac caacggtaaa ggcgcaacca agaaagcggc
     3721 gctggcttct gcactcggtg aatatttcga gcgtctctca accaactact tttttgctga
     3781 tttctggctg ggcgaaacca tcgccaacgg tccatttgtg cattatccca acgaaaaatg
     3841 gttcccactg agcgaaaatg acgatgtgcc agaagggctg ctcgatgacc gtctgcgcgc
     3901 attttacgat ccggagaatg aattgaccgg cagtatgctg attgacctac aatccggtaa
     3961 cgaagatcgt ggtatttgcg gtctgccgtt tacgcgccag tccgacaatc agaccgttta
     4021 tattccgatg aatatcattg gtaacctgta cgtttctaac ggtatgtccg ctggcaatac
     4081 ccgcaacgaa gcacgcgttc aggggttgtc cgaagttttc gaacgctacg tgaaaaaccg
     4141 cattattgct gaaagcatca gcttgccgga aatcccggca gacgtgctgg cgcgttaccc
     4201 agcggtggtt gaagcgatcg aaacactgga agcagaaggt ttcccgatct tcgcatatga
     4261 tggttccctt ggcggccagt atccggtgat ttgcgtggta ctgtttaatc ctgctaacgg
     4321 cacctgcttt gcctctttcg gtgcgcatcc tgattttggc gtagcactgg aacgtaccgt
     4381 gaccgagctg ctgcaaggtc gtggcctgaa agatttggat gtgtttactc cgccaacctt
     4441 cgatgatgaa gaagtcgctg aacataccaa cctcgaaacg cactttatcg attccagcgg
     4501 tttaatctcc tgggacctgt tcaagcagga tgccgattat ccgtttgtgg actggaattt
     4561 ctccggcacc acggaagaag agtttgctac gctgatggct atcttcaaca aagaagataa
     4621 agaagtttat attgccgatt acgagcatct gggcgtttat gcttgccgta ttatcgtgcc
     4681 tggcatgtcc gatatttatc cggctgaaga tctgttgctc gcgaataaca gtatgggcag
     4741 ccatttacgt gaaacgattc tttcgctacc aggcagcgag tgggaaaaag aagattacct
     4801 aaacctcatc gagcaactgg atgaagaagg ttttgatgac tttacccgcg tgcgtgagct
     4861 gttgggtctg gcgaccgggt cggataacgg ttggtacacc ctgcgtatcg gtgaattaaa
     4921 agccatgctg gcgctggctg gtggcgatct ggaacaggct ctggtctgga ccgaatggac
     4981 gatggagttt aactcatcag tatttagtcc ggaacgcgcc aactattatc gctgcctgca
     5041 aacgttgtta ttactggcac aggaagaaga tcgccagccg ctgcaatatc tgaatgcgtt
     5101 tgttcgcatg tacggcgcag atgtcgtgga agccgccagt gcggcaatga gcggcgaagc
     5161 ggcgttttat ggcttgcaac cagtagatag cgatctgcac gcgtttgctg cacatcagtc
     5221 gctgttgaag gcctacgaaa agctgcagcg cgccaaagca gcattctggg caaaataaaa
     5281 tcaaatagcc tacgcaatgt aggcttaatg attagtctga gttatattac aggacgtttt
     5341 tttaatgccc cgctttacat atatttgcat taataaaata attgtaatta taaggttaaa
     5401 tatcggtaat ttgtatttaa taaatacgat cgatattgtt actttattcg cctgatgctc
     5461 ccttttaatt aactgtttta gcggaggatg cggaaaaaat tcaactcatt tgttaatttt
     5521 taaaattcat ttttatttgg ataatcaaat atttactccg tatttacata aaaaccatgc
     5581 gagttacggg cctataagcc aggcgagata tgatctatat caatttctca tctataatgc
     5641 tttgttagta tctcgtcgcc gacttaataa agagagagtt agtgtgaaag ctgacaaccc
     5701 ttttgatctt ttacttcctg ctgcaatggc caaagtggcc gaagaggcgg gtgtctataa
     5761 agcaacgaaa catccgctta agactttcta tctggcgatt accgccggtg ttttcatctc
     5821 aatcgcattc gtcttctata tcacagcaac cactggcaca ggcacaatgc ccttcggcat
     5881 ggcaaaactg gttggcggca tttgcttctc tctggggcta attctttgtg ttgtctgcgg
     5941 agccgatctc tttacttcca cagtgttgat tgttgttgct aaggcgagtg ggcgcatcac
     6001 ctggggtcag ttggctaaaa actggctaaa tgtctatttt ggcaacctgg tcggcgcact
     6061 gctatttgta cttttaatgt ggctttccgg cgagtatatg accgcaaata gtcaatgggg
     6121 actaaacgtc ctacaaaccg ccgaccacaa agtgcaccat acttttattg aggccgtctg
     6181 tcttggtatc ctggcaaacc tgatggtatg tctggcagta tggatgagtt attctggccg
     6241 cagcctgatg gacaaagcgt tcattatggt gctgccggtc gcgatgtttg ttgccagcgg
     6301 ttttgagcac agtatcgcaa acatgtttat gatcccgatg ggtattgtaa tccgcgactt
     6361 cgcatctccg gaattctgga ccgctgtcgg ttctgcaccg gaaaattttt ctcacctgac
     6421 cgtgatgaac ttcatcactg ataacctgat tccggttacg atcggtaata ttatcggcgg
     6481 tggtttgttg gttgggttga catactgggt catttacctg cgtgaaaacg atcaccatta
     6541 atggttgtcg aagtacgcag taaataaaaa atccacttaa gaaggtaggt gttacatgtc
     6601 cgagcttaat gaaaagttag ccacagcctg ggacggtttt accaaaggtg actggcagaa
     6661 tgaagtaaac gtccgtgact tcattcagaa aaactacact ccgtacgagg gtgacgagtc
     6721 cttcctggct ggcgctactg aagcgaccac caccctgtgg gacaaagtaa tggaaggcgt
     6781 taaactggaa aaccgcactc acgcgccagt tgactttgac accgctgttg cttccaccat
     6841 cacctctcac gacgctggct acatcaataa agcgttggaa aaagttgttg gtctgcagac
     6901 tgaagctccg ctgaaacgtg ctcttatccc gttcggtggt atcaaaatga tcgaaggttc
     6961 ctgcaaagcg tacaaccgcg aactggaccc gatgatcaaa aaaatcttca ctgaataccg
     7021 taaaactcac aaccagggcg tgttcgacgt ttacactccg gacatcctgc gttgccgtaa
     7081 atccggtgtt ctgaccggtc tgccagatgc ttatggccgt ggccgtatca tcggtgacta
     7141 ccgtcgcgtt gcgctgtacg gtatcgacta cctgatgaaa gacaaatacg ctcagttcac
     7201 ctctctgcag gctgatctgg aaaacggcgt aaacctggaa cagactatcc gtctgcgcga
     7261 agaaatcgct gaacagcacc gcgctctggg tcagatgaaa gaaatggctg cgaaatacgg
     7321 ctacgacatc tctggtccgg ctaccaacgc tcaggaagct atccagtgga cttacttcgg
     7381 ctacctggct gctgttaagt ctcagaacgg tgctgcaatg tccttcggtc gtacctccac
     7441 cttcctggat gtgtacatcg aacgtgacct gaaagctggc aagatcaccg aacaagaagc
     7501 gcaggaaatg gttgaccacc tggtcatgaa actgcgtatg gttcgcttcc tgcgtactcc
     7561 ggaatacgat gaactgttct ctggcgaccc aatctgggca accgaatcta tcggtggtat
     7621 gggcctcgat ggtcgtaccc tggttaccaa aaacagcttc cgtttcctga acaccctgta
     7681 cactatgggt ccgtctccgg aaccgaacat gaccattctg tggtctgaaa aactgccgct
     7741 gaacttcaag aaattcgccg ctaaagtgtc catcgacacc tcttctctgc agtatgagaa
     7801 cgatgacctg atgcgtccgg acttcaacaa cgatgactac gctatcgctt gctgcgtaag
     7861 cccgatgatc gttggtaaac aaatgcagtt cttcggtgcg cgtgcaaacc tggcgaaaac
     7921 catgctgtac gcaatcaacg gcggcgttga cgaaaaactg aaaatgcagg ttggtccgaa
     7981 gtctgaaccg atcaaaggcg atctcctgag ctacgatgaa gtgatggagc gcatggatca
     8041 cttcatggac tggctggcta aacagtacat cactgcactg aacatcatcc actacatgca
     8101 cgacaagtac agctacgaag cctctctgat ggcgctgcac gaccgtgacg ttatccgcac
     8161 catggcgtgt ggtatcgctg gtctgtccgt tgctgctgac tccctgtctg caatcaaata
     8221 tgcgaaagtt aaaccgattc gtgacgaaga cggtctggct atcgacttcg aaatcgaagg
     8281 cgaatacccg cagtttggta acaatgatcc gcgtgtagat gacctggctg ttgacctggt
     8341 agaacgtttc atgaagaaaa ttcagaaact gcacacctac cgtgacgcta tcccgactca
     8401 gtctgttctg accatcactt ctaacgttgt gtatggtaag aaaactggta acaccccaga
     8461 cggtcgtcgt gctggcgcgc cgttcggacc gggtgctaac ccgatgcacg gtcgtgacca
     8521 gaaaggtgct gtagcgtctc tgacttccgt tgctaaactg ccgtttgctt acgctaaaga
     8581 tggtatctcc tacaccttct ctatcgttcc gaacgcactg ggtaaagacg acgaagttcg
     8641 taagaccaac ctggctggtc tgatggatgg ttacttccac cacgaagcat ccatcgaagg
     8701 tggtcagcac ctgaacgtta acgtgatgaa ccgtgaaatg ctgctcgacg cgatggaaaa
     8761 cccggaaaaa tatccgcagc tgaccatccg tgtatctggc tacgcagtac gtttcaactc
     8821 gctgactaaa gaacagcagc aggacgttat tactcgtacc ttcactcaat ctatgtaatt
     8881 agatttgact gaaatcgtac agtaaaaagc gtacaataaa ggctccacga aagtggggcc
     8941 ttttttagca cgagagcctt ttttgtcagc tatctatact ttaaggtgac tgccaaaaca
     9001 gactcgacgt agccttcgag ctgcgcacca acacggcctc agatgggcca catctggaga
     9061 aacaccgcaa tgtcagttat tggtcgcatt cactcctttg aatcctgtgg aaccgtagac
     9121 ggcccaggta ttcgctttat cacctttttc cagggctgcc tgatgcgctg cctgtattgt
     9181 cataaccgcg acacctggga cacgcatggc ggtaaagaag ttaccgttga agatttgatg
     9241 aaggaagtgg tgacctatcg ccactttatg aacgcttccg gcggcggcgt taccgcatcc
     9301 ggcggtgaag caatcctgca agctgagttt gttcgtgact ggttccgcgc ctgtaaaaaa
     9361 gaaggcattc atacctgtct ggataccaac ggttttgttc gtcgttacga tccggtgatt
     9421 gatgaactgc tggaagtaac cgacctggta atgctcgatc tcaaacagat gaacgacgag
     9481 atccaccaaa atctggttgg agtttccaac caccgcacgc tggagttcgc caaatatctg
     9541 gcgaacaaaa atgtgaaggt gtggatccgc tacgttgttg tcccaggctg gtctgacgat
     9601 gacgattcag cgcatcgcct cggtgaattt acccgtgata tgggcaacgt tgagaaaatc
     9661 gaactcctcc cctaccacga gctgggcaaa cacaaatggg tggcaatggg tgaagagtac
     9721 aaactcgacg gtgttaaacc acctaagaaa gagaccatgg aacgcgtgaa aggcattctt
     9781 gagcagtacg gtcataaggt aatgttctaa tttccccgta aagcggcaac tttattgagt
     9841 tgccgctttt ttattccgcg cttcattctg ctacagcgtt tttaacacat tttatagtgc
     9901 atctaccata tcccgtacct gagataataa cgactgataa tagctcgcat gaagttcttc
     9961 cccatcgaat accactgtat tacacaagaa agtgacatcg gcatcttcaa taccaagata
    10021 actgctcata tttttcaaat aatcgcttat atttttttcc cagcccatct ggacaaatga
    10081 ttctttgtct cctccaacca gcgccaccca acgaacttta ttgaatggta atttgtgccc
    10141 atctccataa gccagcccat tattccatac tctgtcaata tatcctttta gcattgccgg
    10201 gaagctgtac caccagagag gaaaaaccac cactaacatg tcatgttcaa gcagctctga
    10261 ataaagctga tgaacctctg gagaataacg tttatccata ttcttccagt ctggttcatc
    10321 ttccggcgtc atcactgggt tgaaattacg ccgatataaa tcgagttccg tcacctgtat
    10381 tttccgctcc attgcccgct gatggatcgc atcagcaata tgtgcggtca atgaatcatg
    10441 acgaggatgg gtccatacca aataaatacg ttcagactgc ataattttac ctccacgtta
    10501 agttctggag cgcactttac gcaggcggca taatcctgta aacgtgatga ttcaggatga
    10561 gttaatgaag gattttcact aatgcggatg aatatgtctg actttgccac tttctttgcc
    10621 gtggcccgta atcaaagctt tcgtgcagcg ggcgatgagt taggcttatc ctcgtccgcc
    10681 attagccata gtattaaaac actggaacaa cgtcttaaaa ttcgcttatt caatcggaca
    10741 acccgaagcg tatcgttaac ggaagcgggt tctaatctct atgaacgatt gcgcccagct
    10801 ttcgacgaaa ttcagatcat gttagatgag atgaatgatt ttcgtctgac accgacagga
    10861 acgctcaaaa tcaatgccgc ccaggtagct gcacgtatat ttttaatgcc tttactggtt
    10921 ggtttcacac gtgaatatcc tgatattaaa gtcgagctca caactgacga ttctcttgtc
    10981 gatatcgtcc aacagggctt tgacgctggc gttcgactta gtggcatcgt cgaaaaagat
    11041 atgatcagcg tggcgatcgg cccaccagtg aaattatgtg tagcagcaac gccagagtac
    11101 tttgcaagat atggcaaacc ccgccatcct catgatctgc ttaatcatca atgtgttgtt
    11161 tttcgttatc ccagcggcaa acctttccac tggcaatttg caaaggagct ggaaattgct
    11221 gtcgcaggaa atatcattct ggatgatgtt gatgctgaac tggaggccgt tttgatgggt
    11281 gctggtatcg ggtatctgct ctatgaacag atcaaggaat accttgatac tggtcgttta
    11341 gaatgtgtac tggaagactg gagcacagag cgtccaggct tccagatcta ttatccaaac
    11401 cgccagtata tgtcctgcgg cttgcgcgca tttctcgatt atgtaaaaac gggtcagatc
    11461 tgccagagtc aacgtcaccg accacaataa ttatttgcta ttcgcttta
//
LOCUS       DAJVTL010000130        11415 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.132, whole genome shotgun sequence.
ACCESSION   DAJVTL010000130 DAJVTL010000000
VERSION     DAJVTL010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11415
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.132"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            333..2147
                     /locus_tag="OQQ26_003467"
     CDS             333..2147
                     /locus_tag="OQQ26_003467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858809.1"
                     /translation="MVANINLIQQESYSVVNLEKQLMRNKSPKQTLLNDFSHRLKMEG
                     EEQLFHCVNELKYGLSSNNEYDLFKNRETSLWKRKVPESAALAMTGTVYKLFGSRLLN
                     VRNQLDKNLLEMAMQMVYGKDMVTKSGDILIDIQLNKDGSLQSKHYTFDVGEVINSYN
                     IDLFVNASSINQTYLHDKNPGDVISLYGTLDNIPLVVKECTGKNHQINVKAKLPQERS
                     EKVEDMCERMRGGISMFNHTTKTAGNIEHNLQLSFLVDSRPSITNKYSAKDVAPDILA
                     LPVNVYHADFKIKINDEVEKASSIVLCAVQKNLHAARKVLSGITGNVPKNNKPKTIIF
                     DLRFLSAIKQKVFLGSEKPLFVKHTAMMREACKELPQSVEYVPLACEAHSHRSVALAK
                     TVAAPIMATGVGSALMYATSSGPYYAQSLSGSPDIEMIKNRMAELFNQSDISVRNKYS
                     PAFDKWNELVDKLNHERNTVPFACLTTILATAINETPEGDTNVAVVMGCKSAKDRTIS
                     IVLGNSMLQTLLEKRLADGREIENLFDQQGYFSCDSLTAEELMMLKDLFDIRVLHVSN
                     KFNVGLQGNINTDVLQDSFFKNADFIHESNSYTVGMGV"
     gene            2823..3041
                     /locus_tag="OQQ26_003468"
     CDS             2823..3041
                     /locus_tag="OQQ26_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HCS1858810.1"
                     /translation="MAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQ
                     QFPVRKAKGGRQKGEVVGVDDQCKEHKE"
     gene            3260..3502
                     /locus_tag="OQQ26_003469"
     CDS             3260..3502
                     /locus_tag="OQQ26_003469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709694.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858811.1"
                     /translation="MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
                     QYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW"
     gene            complement(3832..4761)
                     /gene="fdhE"
                     /locus_tag="OQQ26_003470"
     CDS             complement(3832..4761)
                     /gene="fdhE"
                     /locus_tag="OQQ26_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HCS1858812.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLREL
                     AENNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKH
                     WQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFI
                     WAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAV
                     ADDLASLVLDARMEQEGYARSSINPFLFPGEGE"
     gene            complement(4758..5393)
                     /gene="fdoI"
                     /locus_tag="OQQ26_003471"
     CDS             complement(4758..5393)
                     /gene="fdoI"
                     /locus_tag="OQQ26_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HCS1858813.1"
                     /translation="MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLM
                     QIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE"
     gene            complement(5390..6292)
                     /gene="fdoH"
                     /locus_tag="OQQ26_003472"
     CDS             complement(5390..6292)
                     /gene="fdoH"
                     /locus_tag="OQQ26_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase O subunit beta"
                     /protein_id="HCS1858814.1"
                     /translation="MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CSDPGCLKACPAEGAIIQYANGIVDFQSELCIGCGYCIAGCPFDIPRLNPEDNRVYKC
                     TLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHY
                     VGVGPNRADEEENNLHEEKDEERK"
     gene            complement(6305..9355)
                     /gene="fdnG"
                     /locus_tag="OQQ26_003473"
     CDS             complement(6305..9355)
                     /gene="fdnG"
                     /locus_tag="OQQ26_003473"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(8768..8770),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HCS1858815.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALSFAPSVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFI
                     HSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLS
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIR
                     SGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYD
                     KSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE
                     YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKSYDVLQYFEMMKEGKVNGYICQGFNPVASFPNK
                     NKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNY
                     AIPHEPSSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIF
                     AGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     LQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            9549..10382
                     /gene="fdhD"
                     /locus_tag="OQQ26_003474"
     CDS             9549..10382
                     /gene="fdhD"
                     /locus_tag="OQQ26_003474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HCS1858816.1"
                     /translation="MKKTQQKEIENVINITGVRQIELWRRDDLQHPRLDEVAEEVPVA
                     LVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSS
                     RRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDF
                     QPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRAQAGESWQQGAVLVSS
                     RASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLS
                     N"
     gene            10535..>11415
                     /locus_tag="OQQ26_003475"
     CDS             10535..>11415
                     /locus_tag="OQQ26_003475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3829 domain-containing protein"
                     /protein_id="HCS1858817.1"
                     /translation="MKRNLLSSAIIVAIMSLGLTGCDDKKAETETPPSANSQPATPAP
                     EAKPTEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYADW
                     LKDFKQGPTGKESTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAV
                     ALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEAVAESYHAAIQEINDKR
                     QLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQA
                     KEADKGGMNFSFINSAG"
BASE COUNT         2950 a         2677 c         2867 g         2921 t
ORIGIN      
        1 agaactctat aaatttttat tcttcgttgg ctccatacgt gtcttgctac atcactgttc
       61 aggagcattt aaatattatt tgtagaactg agtggcaatt atcgcagata atgcttaatt
      121 catcatctta gttcatgttt gagcgatttt tgatagtcaa aaccccctct ggtgccatac
      181 ttttctcata aatattttta aaatctatag ctaacaaata ttatgcaaag ataatggatt
      241 agcatcattg tcagtatcat tcatttactt ctctggatgt tataaataat tatgtagcat
      301 gtttgttctt aaaccgtggg aaggaggctg taatggttgc caatattaat ctcattcaac
      361 aagaaagtta ttctgttgtt aatttagaaa aacaactaat gagaaataaa tcaccgaagc
      421 aaacgctatt aaatgatttt tcacatcgcc ttaaaatgga aggtgaggaa caactgttcc
      481 attgtgttaa cgaactgaaa tatggtttgt cgagtaataa tgaatatgac ctgtttaaaa
      541 atagagaaac ctcactgtgg aaacgcaaag taccagaaag cgcagccctg gcaatgacgg
      601 gaacagtata taaattattt ggtagtcgct tactcaacgt ccgcaatcag ttagataaaa
      661 atctcctcga aatggctatg caaatggttt atggcaaaga tatggtgaca aagtccgggg
      721 atatattgat tgatatacaa ttaaataagg atggcagtct ccagagtaag cactatacat
      781 ttgatgtagg tgaagttata aacagttata atattgacct ctttgtgaat gcttcaagta
      841 ttaatcaaac ttacttacat gataaaaatc ctggtgacgt tattagcctg tatggcactt
      901 tagataacat tccccttgta gttaaggaat gcacgggtaa aaatcatcaa attaacgtta
      961 aagccaaatt gccacaagaa cgaagtgaaa aagttgagga tatgtgtgaa agaatgagag
     1021 gtggcatctc tatgtttaat cacaccacaa aaacagctgg taatatagag cataatttgc
     1081 agctaagttt tctcgtggat tcacggccgt cgatcaccaa taaatactca gccaaagatg
     1141 tagcgccaga catacttgca ttgcccgtca acgtatatca tgcggatttt aaaattaaaa
     1201 tcaatgacga agtagagaag gcttcatcaa ttgtgttatg tgctgtgcaa aaaaatctcc
     1261 atgcagcaag gaaggttctt agcgggataa caggaaatgt accaaaaaat aataaaccaa
     1321 aaacaatcat ttttgattta cgttttctta gtgcaattaa gcagaaagtt tttttgggca
     1381 gtgaaaaacc gttgtttgta aagcataccg caatgatgag ggaggcatgt aaggaattac
     1441 cgcagtcagt ggaatatgtt cctttagcct gtgaagcgca tagccatcgc agcgtcgccc
     1501 ttgccaaaac cgtggctgcg cccatcatgg cgacaggtgt gggctcggct ttaatgtatg
     1561 caacatcatc aggaccgtat tatgcgcaaa gtctttctgg ttcgccggat atcgagatga
     1621 taaaaaatcg catggctgaa ttgtttaacc agtcggatat ttctgtgcgc aacaaatata
     1681 gcccggcttt tgataaatgg aatgaactgg tagataaatt aaatcacgaa agaaatacag
     1741 ttccgtttgc gtgtttgacc accattttag cgacggcgat aaatgaaact cctgaggggg
     1801 atacgaatgt tgccgttgtg atggggtgta aatctgcgaa agatcgcacg atatccattg
     1861 tccttggcaa ctcgatgttg caaacactcc ttgaaaaacg cctcgccgat ggtagagaaa
     1921 tagaaaatct ttttgatcaa cagggatatt ttagttgcga ttcattaaca gccgaagaat
     1981 taatgatgtt aaaagacctt tttgatattc gagttcttca tgtctctaac aaattcaatg
     2041 ttgggttgca aggtaatatc aacacggatg ttttacaaga ttcgtttttt aaaaatgccg
     2101 atttcattca tgaatctaac tcgtataccg tagggatggg agtctgaaga gtaaaactca
     2161 ttaggattat cagaattcgg ccaatgcatt gcaaaaatga aatacaaaga gagatgtgtg
     2221 caggcgctta gccgcgaggg gcatggcgaa gccatacaga aagcaccagc attcagaact
     2281 cctgtgaaag cggcatagtg ccgctgctca ggagttttgc tatgacccgt aatcgtgcgg
     2341 aacgttgcca ccctatgatg cgattaaaaa aactcatcgt cgcgctgatg attgacgtca
     2401 atgctatcgg atgatgccgg gggtgttccg gaaggaattc cttgtttccc gaactgttac
     2461 caacaaaatt ataacgatga gcaagtaaag accggttggt ggcagtactg accggtctgt
     2521 gatggaagat taatttcacc ttaaatcctg gtgctgttag gatgctgacg tttttcggct
     2581 acaccattca gattatgcaa ataaatatct ctgaatataa tatattcaga gcacccataa
     2641 ttcatcctgg gcgataacta aaccattttt gagtaataaa tgaaacaact gcaacactct
     2701 tattatttct ggaaaacgcc tcgcaaaaac aaaacaacat gcaaaaatcc gcttttttta
     2761 aatgattttc cggcgtaatt ttcgcacata cattaatgag taatataggt aaggtggtgg
     2821 taatggcgat gaatacggtt tttcttcatt tatcagaaga ggcaattaaa cggctgaaca
     2881 agcttcgggg ctggcgtaag gtttcacgat ctgcaatttt acgcgaagcg gttgagcaat
     2941 atctggagcg gcagcaattt ccggtgcgta aagcaaaggg aggcaggcaa aagggggagg
     3001 tagttggtgt tgatgatcag tgtaaggagc ataaggaatg aaaaaaaatt ttcattcttg
     3061 aatataaaaa aacagatgcc cttattctgg tattaataca aggctgtttt acttgaactt
     3121 ataataactg caactgttac atcgtatctg gaaaacgcct cgcaaaaata aaaagtgatg
     3181 cgtaaatgcg ctttctttaa agattcggca agggtacttt tctctccata gattcaaaaa
     3241 tgatattggc gagatattta tgaactctct ggcaggtata gatatgggca gaattttact
     3301 cgatttatcg aatgaggtga ttaagcaact tgatgatctc gaggtgcagc gtaatcttcc
     3361 tcgtgcggac ctattaaggg aagcggtaga tcaatacctg ataaatcaat cgcaaacagc
     3421 aagaaccagt gttcctggca tctggcaagg gtgtgaggaa gatggtgtcg aatatcagcg
     3481 taagctgcgc gaggaatggt aatgggaaaa aatgatgtca atcagattgc tgacaacgtg
     3541 cgcgttgttc atgccggatg cggcgtgaac gccttatccg gcctacaaag tcgtataaat
     3601 tcaatgtatt gcagtttatt ggtaggcctg ataagcgcag cgcatcaggc aatcttacgc
     3661 ttgtcatcag tctcatgccc ataaccttat tgatgtggtg gtgggtaaat tgaggccaaa
     3721 ccggcactgg cggcatagct tgaggtggta acgcggaata cgagagatgg tgtcgtcaca
     3781 ccctatgagc tgtaatccgg gcgacctgcg ccacccggaa aacgtcagag attactctcc
     3841 ttcacccgga aacaggaacg ggttaatgga actacgggcg tagccttctt gctccattcg
     3901 cgcgtccagt accagagagg cgaggtcatc tgccacggct tcaactttcg gttctttttc
     3961 ctgataaaga atcttcaggt aagtgccgca gtcatcgcag ctttcggctt taatcgcggc
     4021 ctgttcgtca tccagcgacc agtaatgcag tttgccgctc tgctcgcagt tgctgcattt
     4081 tacgcgcact acgtgccatt cggtttcaca caggttgcag tgcaggtaac gcagaccctg
     4141 agtggtgcca atttgcacca tgctggacac cggcatagag ccacataccg ggcaatattg
     4201 acgttgctcg ccgtattcag cgcgggcttt gccggggatc agattggcca tctgcgccca
     4261 gtagagcgac agtgcagccc agataaacgg cgctttatcg ctgctgacgg atgagaaatc
     4321 agaggcaaac agcgcgctgg ccatatcttc cagctcctga gtcgatgcct tctccagatt
     4381 ctcaatcact gccagcgccg ggccgctcat ttcaggttta agctcagcaa tcagcgccat
     4441 cagcagcttt tgccagtgct tatcacgcgg cagaacgtga atatccagcg ggggcttgcc
     4501 ttgtgcgctg gcttctttaa tgcgtgcagt cagatccatc tccagcggat ggtcgtacag
     4561 caccacttcc tgggcgtggg cgataagcgc agcaaagcgc aggtaatcac ccagcggatt
     4621 attttctgcc agctcgcgca gacgctcggc gcggcggttg tataaattct tgagccgagg
     4681 gaacaataac ggcggaatca tatccgccgt acgtttctcg ctcgaaccca gctcatcttg
     4741 cgggattatg cgaatactca ttcagctttc ttttccgttg tcttgcggac ctcacggtac
     4801 cagcgcgggt gatgtttctt cgcccaagcg ctggtaaccc atccttccac catggcggta
     4861 atcgtgcctt tcacccaaag ggcggcgtag atatgcacca tgataaccac aattaacgcc
     4921 actgcggcaa atgaatgcag cattaacgcg aatcggatca ccgggattga gaaagcaggc
     4981 gcaaaataag gacgccagat aatcacgccg ctcaccagca gcagaaccag gaaaataatc
     5041 gccgcccaga aaacgcattt ctgaccgaag ttataacgcc cggtgtcacc tacttcctcg
     5101 ttgacgacga tcttacgaat attcttcgcc caaaagatat catcccgatt gattaggttg
     5161 tgatgccagt aacggaaaaa catgatgatg aacgaggcaa acataaccac gccgacaaac
     5221 gggtgcagaa ttcgcgccag ctgcggtgtg cccatgattt gcatcaacca gttgaaggac
     5281 gggaacaaaa agcccagccc gctcaccgcc gccaggatga agcagaaggc ggtgatccag
     5341 tggttgatac gttccggcgc ggtgtagcgc acgatggtgt cacgtcgttt catttgcgct
     5401 cctcgtcttt ctcttcgtgc agattattct cttcctcatc cgcacggttc ggaccgacac
     5461 ccacgtagtg gaagatactg gccgcaaagg tagccgcaaa gccaacagcc gcgagcggtt
     5521 tccagatgcc tttccagaat ttcacggttt cgctgatttc cgggttctcc ggcaagccat
     5581 gatacagatt tggcttgtca gcatggtgca gcacgtacat gacgtgtgta ccaccgacgc
     5641 ctgccggatc gtacagaccc gcattgtcgt aaccgcgggt tttcagctca gcaacgcgct
     5701 cgctcgccag cgttttcatc gactctttcg taccgaagtg aatcgcgccc gttgggcagg
     5761 tcttcacgca ggctggttct tgcccaacca ccacgcggtc aacgcacagc gtacatttgt
     5821 agacgcggtt gtcttccggg ttgaggcgcg gaatgtcgaa cggacagccc gcaatgcaat
     5881 aaccgcagcc aatgcacagc tcggactgga agtcgacgat accgttggca tactgaataa
     5941 ttgcaccttc cgccgggcac gctttcaggc agcctggatc ggaacagtgc atacagccgt
     6001 ctttgcggat cagccattcc agtttgtcgt tctgctccac ttccgagaag cgcatcaccg
     6061 tccacgattt ggcgcttaaa tcattggggt tgtcgtacac cccaatgtta ttgccgacgg
     6121 tatcgcgaat gtcgttccac tctgaacacg ccacctgaca ggctttacag ccgatacagg
     6181 tggtaacgtc gatgagtttc gccacttctt cctggaagtc ccgcgcctga ggcgcggggg
     6241 tcagaccgtt agtcgcggaa cgacgaatga tatcttgaga ttgataagcc atatgtcgtc
     6301 tccgttacac cttttccaca ttcacaagga aggacttaaa ctccggcgtc tgcgtgttcg
     6361 catcaccaac gaatggcgtt aaagtattgg caataaagcc ttttttagct acgccttcat
     6421 agccccagtg aatcggaata ccgatggtat cgatatcttt gccgttcgct ttcagcgtgc
     6481 gaatacgttt ggtcaccacc gctttggctt tgatatagcc acggttggag gagactttca
     6541 cggtatcgcc ctgggcaatg ccaagtttat tcgccagcga ctccccgatt tccacaaact
     6601 gctctggctg caaaatcgcg ttcaacagcg cgtgtttggt ccagtagtgg aagtgctcgg
     6661 tcagacgata ggtggttccg acatacggga acttatcggc tttacccaat gcttcggcgt
     6721 cgtctttaaa gatacgtgca gccgggttcg agataacgtt tggatgcagc gggttagttc
     6781 ccagcggcgt ttcaaacggc tcgtagtgtt ccgggaacgg accttccgcc atcttatcga
     6841 gggcaaacag acgccccatg ccttcctgct gcatgataaa cggcccgacg ccgctacccg
     6901 gaggcgctgc gctgtagtcc ggaatatccc agccggtcca cttagtgccg tcccatttca
     6961 gcaactgacg cttcggatcc cacgggttac cctgcggatc tgcggaggcg cggttataca
     7021 gaatgcggcg gttaagcggc catgcccatg cccagcccag cgtgttaccg aggccagacg
     7081 gatcggcgtt atcacgacgc gccatctggt tgccttccgg cgtccagcta ccggcgaaaa
     7141 tccagcaacc acaggaagtt gtaccgtcat cgcgcagttg ggcgaacgag ctaagttgtt
     7201 ggcctttctt gacgataacc gcaccggttg ccggatcggt aatatcggcc agcgccttac
     7261 cgttactctc catcgccact tcttctgaag atggctcatg cggaatggcg tagttccagg
     7321 tcatgttcag cacctggtcc gggttcgcgc caccctgttc ggcatacatc ttgcgcaagc
     7381 gcaggaagat accggagagg atctcaccgt cagtcagcgc aatccccggg gcgtccgcac
     7441 ctttccagtg ccactgcaac cagcgacctg agttaacgat tgaaccgttc tcttctgcga
     7501 agcaggtcga tggcagacgg aacacttcgg tctggatctt cgacgagtca acttcgttca
     7561 gctcaccgtg gttctgccag aagttagagg tttcagtgtt cagcgggtcg atggtgacga
     7621 ggaacttcag tttcgacaga caaccgatca ctttgttttt gttcgggaat gaggcaacag
     7681 ggttaaagcc ctggcagata tagccattga ccttgccctc tttcatcatc tcgaagtatt
     7741 gcaggacgtc gtagctttta tcccacttcg gcaaccagtc aaagccccag ctattttccg
     7801 ccgttgcttt atcaccaaag aaggccttca tcatagagac gaagaatttc gggtagttgc
     7861 cccagtagtt tacttggcct tccagcagcg gttttggcgt gttggcggta aggtaggttt
     7921 gcagatcggt ctgcttctcg cttggcagcg tcatgtaacc tggcaggctc tgcgacagca
     7981 gccccaggtc cgtcagcccc tgaatattgg agtgaccgcg cagggcgtta acgccgccgc
     8041 ctgccatccc catattgccg agcagcagct ggatcatcgc catcgtacga atgttttgcg
     8101 caccaacgga gtgttgcgtc cagccgaggg catacaggaa cgaggcagtt ttatcgtgag
     8161 cactggtttc tgcgatgtat tcgcagactt tcaggaacgc gtcttttggc gtaccacaga
     8221 tgttttcaac cacatctggc gtgtagcggg aaacgtgctg tttcagcaag ttccacacgc
     8281 agcgcggatg ttgcagcgtg gtatcgcgtt tggcgaagcc gttttcgtcc agttcgtaag
     8341 tccaggagga tttatcgtac ttgcgttttt ccgcgtcata gccggtgaac aggccatctt
     8401 caaagccgta atcctcacgc acgatcaggc tggcgttggt ataggcttcg gtgtattcgc
     8461 ggttgaattt ttcattgttc agcaggtaca gcaatacgcc tgacaggaaa gcaatgtcag
     8521 taccggaacg aataggggca tagtagtcag ccaccgccgc cgtacgcgta aagcgaggat
     8581 cgatcacaat cagcttcgcg ccattgtgaa ttttggcttc catcgcccag cggaacccga
     8641 ccgggtgagc ttcagcggcg ttaccgccca tcaccacgac gaggttggcg ttcttgatgt
     8701 cgacccagtg gttggtcatc gcaccgcgac caaatgttgg agcaagactt gctaccgttg
     8761 gtccgtgtca gacacgcgct tggttgtcga ccgcgagcat acccagcgcg cgggagaatt
     8821 tttgcgttaa atagccggtt tcgttactcg acgcggaagc acacagcatc ccggtggaga
     8881 gccagcggtt aacagtcacg ccttcggcgt tttgcgcaat gtagttagca tcgcggtctt
     8941 ctttcatcag tttggcgatg cgatcaaacg cctcttccca actgatttgc tgccatttat
     9001 cagaacctgg cgcacggtat tccggaaact tcagacggct ttcggagtgg atgaaatcca
     9061 ccaggcctgc gcctttcgga caaagtgctc cgcggttgac cgggtgatcc ggatcgcctt
     9121 cgatatggaa gatagatgct ttggcgtttt ttgctccgtc accgaggctg tacatcaaca
     9181 gcccacagcc tacggaacaa taggtgcagg tattacgggt ttcgcgggtg cgcagcagtt
     9241 tatactgccg ggtttccgcg agtgctacgc tgggtgcaaa actcagtgcc gctgccgtgg
     9301 tgcctgccat accgccagcg cagatcttaa agaactgcct tctgctgacc tgcatggatt
     9361 gctccttgtt tcgacattgt cacgtcccat ttacattcgc ttgctgcgtg tgcagggagt
     9421 gggagttatt tttctttgcg gaaggggccg caaaggtcca gaattggctc aatttccctc
     9481 catccaggaa gggtttgtaa cagaatacca taatgttggt gtgtgtgttc ttatctggtt
     9541 aagagaaagt gaaaaaaaca cagcaaaaag aaatcgaaaa tgtgataaat atcacaggtg
     9601 ttcgtcaaat tgagttatgg cggcgtgatg atttacaaca cccacggtta gatgaggtcg
     9661 cggaagaagt tcccgttgcg ctggtctaca acggcatttc gcatgtggtg atgatggcgt
     9721 cgcccaaaga ccttgagtac tttgcgctcg gtttttcgct ttccgagggg ataatagaaa
     9781 gtccgcgcga tatcttcggc atggatgtcg ttccttcctg taatggtctt gaagtacaaa
     9841 ttgagctttc cagccgccgc tttatggggt tgaaggagcg ccgccgggcg ctggcgggac
     9901 gtacgggctg tggcgtatgc ggcgtggagc aacttaatga catcggaaaa ccggtgcagc
     9961 cgctaccgtt cacccagacg tttgatctca acaaactgga tgatgcatta cgtcatctca
    10021 acgattttca gccagtgggg caactgactg gttgtactca cgccgctgcc tggatgttgc
    10081 catctggcga actggtcggc gggcatgaag acgtgggtcg ccatgtggcg ctggataaac
    10141 tgctgggccg ccgggcgcaa gcaggggaaa gctggcagca aggtgcggtg ctggtttcca
    10201 gccgtgccag ttatgaaatg gtgcaaaagt cggcgatgtg cggcgtagag attttgtttg
    10261 cggtgtctgc cgcgaccacg cttgctgtag aagtggccga gcgttgtaat ttgacgctgg
    10321 tgggcttttg taaaccgggt cgggcaacgg tttataccca tccgcagcgt ttgagcaatt
    10381 aattaaaata agtcctgcga tatatattaa tttgcaggac ttattcattg cgtgaatttt
    10441 attattttat ttataaacaa aacgcgtgta gtggcgtttt cttttttcat ttattatgtt
    10501 cactctctta tctatatatt tataaggcaa ttaaatgaaa aggaatttat tatcttccgc
    10561 tattatagtc gccatcatgt ccctcggtct cacgggttgt gatgataaaa aagccgaaac
    10621 agaaacgccc ccgtctgcca atagtcaacc tgccacacca gctcctgaag cgaaacctac
    10681 tgaagctccc gtagcaaaag cagaagctaa acctgaaacg cctgcgcaac cggtggtcga
    10741 tgaacaagcg gttttcgacg aaaaaatgga tgtttatatc aagtgctaca acaagttaca
    10801 gatcccggta cagcgcagtc tggcgcgtta tgctgactgg ctgaaagatt ttaaacaggg
    10861 gcctaccggt aaagagagta ctgtttatgg catctacggc attagtgaat ccaacctcgc
    10921 tgagtgtgaa aaaggcgtaa aaagtgctgt ggcgttaacg cctgcgctgc aacctattga
    10981 tggcgtggcg gtgagttata ttgatgctgc cgtggcgttg ggtaatacca ttaacgaaat
    11041 ggataaatat tacacccagg aaaattataa agacgatgcg tttgcgaaag ggaaaacgct
    11101 gcaccagaca ttcttaaaaa atctggaagc ctttgaagct gtagcagaat cttatcatgc
    11161 ggcgattcag gagattaatg ataagcgtca gcttgcggaa ctgaaaaata ttgaagaaag
    11221 agaaggaaaa acattccact actactctct ggcagtcatg atttcagcga aacaaattaa
    11281 caacctgata tcgcaagata agtttgatgc agaagcggca atgaagaaag tgtctgaact
    11341 ggaaacgctg gtggcgcagg ccaaagaagc ggataaaggc ggcatgaatt tctcgtttat
    11401 taattcggca ggcca
//
LOCUS       DAJVTL010000131        11254 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.133, whole genome shotgun sequence.
ACCESSION   DAJVTL010000131 DAJVTL010000000
VERSION     DAJVTL010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11254
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.133"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..606)
                     /locus_tag="OQQ26_003476"
     CDS             complement(<1..606)
                     /locus_tag="OQQ26_003476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HCS1858818.1"
                     /translation="MLRMTPLASAIVALLLGIEVYAAEETFDTHFMIGGMKDQQVANI
                     RLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGK
                     QCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYL
                     SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTNN"
     gene            complement(622..1296)
                     /locus_tag="OQQ26_003477"
     CDS             complement(622..1296)
                     /locus_tag="OQQ26_003477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HCS1858819.1"
                     /translation="MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQG
                     NRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKES
                     IFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG
                     LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSINVKSNNANNWYLTIIDDHGN
                     YISDKI"
     gene            complement(1377..1919)
                     /locus_tag="OQQ26_003478"
     CDS             complement(1377..1919)
                     /locus_tag="OQQ26_003478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1858820.1"
                     /translation="MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFE
                     AGGDSVSINMPTVPTTVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDK
                     ITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLT
                     DNSVQSGDVLSSLVMRVAQD"
     gene            complement(2212..2493)
                     /locus_tag="OQQ26_003479"
     CDS             complement(2212..2493)
                     /locus_tag="OQQ26_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehE family protein"
                     /protein_id="HCS1858821.1"
                     /translation="MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMV
                     NGQPQQHCGQLTYNVDTRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD"
     gene            complement(2755..3864)
                     /gene="apbC"
                     /locus_tag="OQQ26_003480"
     CDS             complement(2755..3864)
                     /gene="apbC"
                     /locus_tag="OQQ26_003480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HCS1858822.1"
                     /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
                     RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
                     ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
     gene            3996..6029
                     /gene="metG"
                     /locus_tag="OQQ26_003481"
     CDS             3996..6029
                     /gene="metG"
                     /locus_tag="OQQ26_003481"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708001.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HCS1858823.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
                     NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
                     SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLASELADPELYKTFTDAAEVIGEAWESREFGKAVREIMALAD
                     LANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
                     TELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAPVTGPLADDP
                     IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
     gene            6170..9955
                     /locus_tag="OQQ26_003482"
                     /pseudo
     CDS             6170..9955
                     /locus_tag="OQQ26_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="WGR and DUF4132 domain-containing protein"
     gene            10026..>11254
                     /locus_tag="OQQ26_003483"
     CDS             10026..>11254
                     /locus_tag="OQQ26_003483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858824.1"
                     /translation="MSVITESIIQTLGDELLQKAEKKKNIVWRYENFSLEWQSAITQA
                     INLIGEHKPSVPARTMAALACIAQNDSQQLLDEIVQQEGLEYATEVVIARQFIARCYE
                     SDPLVVTLQYQDEDYGYGYRSETYNEFDLRLRKHLSLAEESCWQRCADKLIAALPGIT
                     KVRRPFIALILPEKPEIANELVGLECPRTHFHSKEWLKVVANDPTAVRKLEHYWSQDI
                     FSDREASYMSHENHFGYAACASLLREQGLAAVPRLAMYAHKEDCGSLLVQINHPQVIR
                     TLLLVADKNKPSLQRVAKYSKNFPHATLTALAELLALKEPPARPGYPIIEDKKLPAQQ
                     KARDEYWRTLLQTLMASQPQLAAEVMPWLSTQARAVLKSYLSAPPKPVIDGTDNSNLP
                     EILVSPPWRSKKKMTAPR"
BASE COUNT         3057 a         2785 c         2594 g         2818 t
ORIGIN      
        1 gttatttgtt ttactgaaac tggcatcaga atgcagttgc caccccagta aatttaaccc
       61 gctgttaaaa cgtacatatg tactcttact attacccgac gctttatagt cactgtaata
      121 ctgactcaga taataagagg tataaaacgc attaataccc cgctcccagt tttccggtgg
      181 aacatagcca ctttccagtt cttccaccca agcctgcggg acactgaaat cgagacgaaa
      241 aaccccgata tcccagctat agctcccacc ctgaacaagt tgctcaaatg ttaaacattg
      301 cttaccactg gcgaagttat cgctattaat gcctaaccgc ttgataactt ctcttgataa
      361 acatgtttct tgcgggttgt ctttaacaat gatctcatat ttcccgcgcc attgcttatt
      421 gacataaata tcgatgtcat actgccccgg caagggttga ttatcatcaa gacgaatatt
      481 tgcaacctgc tggtctttca ttccacctat cataaaatgg gtatcaaagg tttcttcagc
      541 tgcataaact tcaatgccga gcaataacgc tacgattgct gatgcaagtg gggtcattct
      601 caacataggc agctcctgca attaaatttt gtcactaata tagttgccgt ggtcatcgat
      661 aatagtcaga taccagttat ttgcattatt acttttgaca ttaatactct gactttctaa
      721 gggggcaatc ataatagttt cataattgac tttgacatta ttagctttga catctgaaat
      781 cgtcacccaa ttagctgagt cattttttat caccaatcca ttgccactgc gatttaccag
      841 taacttttta aaggtcgctt tatttaccgg agcaataccc gccggccggt aaaacaattt
      901 gattctgttt tgcatcgcaa acttcagtgc attcttacct tcttgttctg ggctatttgg
      961 tggaatatcc agaacattca gataaaaaat gctttcttta ttagtgggca gtttattcgg
     1021 cataattttg atttttactt gctgcccgga atttgctcct atttttgcca ctggtggcgt
     1081 taacatgaaa ggaacctgaa ttttttctgg tggtaacgac gtatcgccat catcaatcca
     1141 cgcctgcagc agcgaagaac ggtttccctg gttcatcaac tgcaccataa cttctttatt
     1201 ttctgccggg taaataatgc gcgtcccgta gataacaatt ccggcatgtg caggaaggac
     1261 catagaaaaa atgagtaaag ataataatcc tttcatctta atgcctctta aattaaaaag
     1321 ccgccatggg gatagcggcc atgtttatta cctggagaaa cttgcaattt tatttattaa
     1381 tcctgcgcca cacgcataac cagagaagat aacacatcac ctgattgcac tgagttatct
     1441 gtcagtttca ggtattttgc tttgaacgga atggcatatt gaccttccgc tgttttataa
     1501 ctctcaatgt taaaaggtgc agaaacatcc aggacatcgc tgttatcacc taaatagaga
     1561 tagtaaccca cggtatcgtt gctactggct atcgccttat cgttaccagt tattttatcg
     1621 ttggtaatca acgagagttt tacaccagca acttctttcg ggcagctaat ttttaacatg
     1681 ctactggtta caccgactgc atcatcatag gtagaatatt tagctttacc ttcaaagaca
     1741 gtggttggta cagttggcat attaatactt actgaatcac cacccgcttc gaatttacac
     1801 ggagattctg caatattccc tttaatagtt aatgttccgg tatcaacgtc tgcagcaaat
     1861 actccagcgc tcataaaaaa agaagaaaag acagcggcag caataattga acgtttcata
     1921 atatattcct taataaaatt tatttttggt tgttaagagt ctgtatctct tggaaacaaa
     1981 tttctcacat caaaaaagtt gccgcaatgc aaacatattg ttttattgat ttaaaacaaa
     2041 ttaaccattg caatataaat acaacaaata cttaagagta ttaaatattt atcgcatcta
     2101 ttaattaatg tagatttatg taaatggtat tgttgatatc aataaaaaag ccgaaatcat
     2161 ttatataaat gatttcggct ttctaaatgc aattaaaatc aggttgccaa attaatcgta
     2221 gcgatttaac acgattcgac gtttgctatc gctacctgca acaaccactt ctgtcgttac
     2281 acctttgacg ggcgaagaaa acagatgacg ggtgtcaaca ttatacgtta actgaccaca
     2341 atgctgttga ggttgaccat taaccatagc catactgcat gttgggggac tgatcctgcc
     2401 attaatcgct aatgtggcag tctctgaaga gaatgcggga gaagccaatc cataggcaag
     2461 aaaaataatt cctgacagcc aatacttatt cattgaacgt tatccctgta gtaaaggtta
     2521 tgcctggata gaatgagtgc ataacaaact atagctgtac atccactaca cagcacgaag
     2581 gatgataatg aagcattacc tgtacgatca atcgactttg tagagtttcg gacgaaggtc
     2641 cgcagaatat tcgcagtatt aaataagtgt tcattaatgc ggcaaaaaca aatacaccgc
     2701 atcaatataa catctctgcg gtgtatgaag aataaccaga atggttaata ggcgttagac
     2761 cgcgcggaag gaaatctcgc ctggaatgac ttcaccctgc cagtagagct gagctgcaac
     2821 gcggtcagcc agctggcggt agatagcggt aaattcgctc tccggacggc tgataaccgt
     2881 tggcgtgcct ttatcgagat cctcacgtaa ggagatgtgt aacggcatct gccccagcag
     2941 ctgtgtgtgg tatttttcag ccagtttctc tgcaccaccg gtaccgaaaa tcggttcatg
     3001 atgaccacag ttactgcaaa tatgcacact catgttctcg acgataccga gtaccggaac
     3061 ctcgactttc tcgaacatca caatgccttt tttcgcatcg atcaacgcga tgtcctgcgg
     3121 ggtggtgacc acgactgcac cagttactgg aatgttttgc gccagcgtca gctgaatgtc
     3181 accggttcct ggcggcatgt cgagtaccag atagtccaga tccggccaca aggtttcctg
     3241 caacatctgc attaacgcct tgctcgccat cggaccacgc cacaccatcg cattgtcgtc
     3301 agtgaccaga taaccaattg aattggttgc caggccatga gacataatcg gtgccatatg
     3361 ggtaccgtcc ggcgaagttg gacgctgatt ttctgcgccc aacatggtgg ggattgatgg
     3421 gccgtagata tcggcgtcca gaataccgac tttcgcccct tccgccgcca gtgccagcgc
     3481 caggtttacc gccgtggagg atttacccac gccaccttta ccggaactga ccgcaatgat
     3541 gttcttcacg ccgttaatac ccggctgatt cttcacgcgt tttaaggtgg cgatattgtg
     3601 cgacagtttc cagtcgattg ctttcgcccc ggtgatgcgc agcagttcgg cgctgcattg
     3661 ctcttttaac tcttcgaacg cgctatgcca gacgaatggc ataaccagtt ccacatgcaa
     3721 cgtgtcgtcc atccaggcga catgatgcaa cgctttcagc gtagtgaggt tatgcttcag
     3781 ggttgggtgc tgaaaattgg ccagtgtccc ggcgaccatt gcgcgcaagg cttctggtga
     3841 tttggcctgg gattgttcgt tcatcccgac tccttttttg tatagataaa ccatcagctg
     3901 atagtttacc tgaagaatat agagaagtac ttacttaaca ttttcccatt tggtactatc
     3961 taaccccttt tcactattaa gaagtaatgc ctactatgac tcaagtcgcg aagaaaattc
     4021 tggtgacgtg cgcactgccg tacgctaacg gctcaatcca cctcggccat atgctggagc
     4081 acatccaggc tgatgtctgg gtccgttacc agcgaatgcg cggccacgag gtcaacttca
     4141 tctgcgccga cgatgctcac ggtacaccga tcatgctgaa agctcagcag ctcggtatca
     4201 ccccggagca gatgattggc gaaatgagtc aggagcatca gactgatttc gcaggcttta
     4261 acatcagcta tgacaactat cactcgacgc acagcgaaga gaaccgccag ttgtcagaac
     4321 ttatctactc tcgcctgaaa gaaaacggtt ttattaaaaa ccgcaccatc tctcagctgt
     4381 acgatccgga aaaaggcatg ttcctgccgg accgttttgt gaaaggcacc tgcccgaaat
     4441 gtaaatcccc ggatcaatac ggcgataact gcgaagtctg cggcgcgacc tacagcccga
     4501 cggaactgat agagccgaaa tcggtggttt ctggtgctac accagtgatg cgtgattctg
     4561 aacacttctt ctttgatctg ccctctttca gcgaaatgct gcaggcatgg acccgcagcg
     4621 gtgcgttgca ggagcaggtg gcaaacaaaa tgcaggagtg gtttgaatcc ggcctgcaac
     4681 agtgggatat ctcccgcgac gcgccatact ttggttttga aattccgaac gcgccgggca
     4741 aatatttcta cgtctggctg gacgcaccga ttggctacat gggttctttc aagaatctgt
     4801 gcgacaagcg cggcgacagc gtaagcttcg atgaatactg gaagaaagac tccaccgccg
     4861 agctgtacca cttcatcggt aaagatatcg tttacttcca cagcctgttc tggcctgcca
     4921 tgctggaagg cagcaacttc cgcaagccga ccaacctgtt tgttcatggc tatgtgacgg
     4981 tgaacggcgc gaagatgtcc aagtctcgcg gcacctttat taaagccagc acctggctga
     5041 atcattttga cgctgacagc ctgcgttact actacactgc gaaactctct tcgcgcattg
     5101 atgatatcga tctcaacctg gaagatttcg ttcagcgtgt gaatgccgat atcgtgaaca
     5161 aagtggttaa cctggcctcc cgtaatgcgg gctttatcaa caagcgtttt gacggtgtgc
     5221 tggcaagcga gctggctgac cctgagctgt acaaaacctt taccgatgcc gctgaagtga
     5281 ttggtgaagc gtgggaaagc cgtgaatttg gtaaagcagt gcgcgaaatc atggcactgg
     5341 ctgacctggc taaccgctat gtcgacgagc aggctccgtg ggtagtcgca aaacaggaag
     5401 gtcgcgatgc tgacctgcag gcgatttgct caatgggcat caacctgttc cgcgtgctga
     5461 tgacttacct gaagccggta ctgccgaaac tgaccgagcg tgcagaagcc ttcctcaata
     5521 cggaactgac ctgggatggt atccagcaac cgctgctggg ccacaaagtg aatccgttca
     5581 aggcgctgta taaccgcatc gatatgaaac aggttgaagc tctggtggaa gcctctaaag
     5641 aagaagtgaa agccactgcc gcgccagtta ctggcccact ggcagatgat ccgattcagg
     5701 aaaccatcac ctttgacgac ttcgccaaag ttgacctgcg cgtggcgctg atcgaaaacg
     5761 cagagtttgt tgaaggttct gacaaactgc tgcgcctgac gctggatctc ggcggtgaaa
     5821 aacgcaatgt cttttccggt attcgttctg cttacccgga tccgcaggca ctgattggtc
     5881 gtcacaccat tatggtggct aacctggcac cacgtaaaat gcgcttcggt atctctgaag
     5941 gcatggtgat ggctgccggt cctggcggga aagatatttt cctgctaagc ccggatgcag
     6001 gtgctaaacc gggtcatcag gtgaaataat ccctcttcaa ggcgctgcat cgacagcgcc
     6061 ttttctttat aaattcctaa agttgttttc ttgcgatttt gtctctctct aacccgcata
     6121 aatactggta gcatctgcat tcaactggat aaaattacag ggatgcagaa tgagacactt
     6181 tatctatcag gacgaaaaat cacataaatt ctggacggtg gagcaacagg gaaacgagtt
     6241 gcatatcagt tggggaaaag ttggcaccaa agggcaaagt cagataaaaa gtttttcaga
     6301 tgctgcggca gcggcaaaag cggaactgaa gctgattgcg gagaaggtga agaaggggta
     6361 tgtggcgcaa gcgaaagata attctttgca accttcccaa acggtaacgg actctctcaa
     6421 ggtagcggac ttatccacca ttattcagga acaaccctct ttcgtagcag aaacccgtgc
     6481 ggctgacaaa aatacagatg ctgttttacc gtggctggcg aaagatattg ctgtcgtttt
     6541 tccgcccgaa gttgtacaca ccacgttaag tcatcgccgc tttcccggag ttcctgttca
     6601 gcaagcagac aaattgaccc aattacgtcg cttagcctgt agcgtgtcgc aacgggataa
     6661 taaaacagcc acatttgact tcagcacctg ttctttagaa tggcaaaaca ccgtcgccca
     6721 ggcgatcagt gagatcgacg gcctgaaaac aacacagcta ccatcaccag taatggctgt
     6781 actcacggca cttgaaatga aatgcacaag atataaagtg cgtgaggatg ttatggatca
     6841 gatcgtccag gaaggcggtc tggaatatgc tactgatgta ataatacacc ttcaacagat
     6901 tgatattaaa tgggattatg cgaataatgt cattattatt ctgccgtctg gcattgcacc
     6961 tgactacttg gagcaatatt ccagatttga attacgccta cgtaaacatt tatcactggc
     7021 ggaagagtct ctctggcaaa aatgtgcaca aaaacttatt gccgcaattc cacatattcc
     7081 agaatggcgg caaccattaa ttgctttgtt attacccgaa aaaccagaaa ttgcacatga
     7141 aattgcccag cgtctactgg ggcaaaaaaa attaccctcg cttgagtggt taaaaatagt
     7201 ggcgactgat gagcacattc ttgcctcatt agaaaaatat cacgagccat atgccatttt
     7261 tgatgattac tattgtggtg cgatatggtc agccaccgta ttacaggagc aaggtgttgc
     7321 agccctgccc cgatttgctc cctatgccgc aagtgactac tgcgccgatg tgttgcgtca
     7381 tatcaatcat ccgttcgcat taacactgct tatacgtgta gccgggcata ctaaacgctg
     7441 tcacgatcga atgacgaaag cctgcgctgc gttcccacac gcagcactgg cggaacttct
     7501 agtgcaaaaa gaagagaata gttggcgcat tatgctaatg acgatgttta tctcgcaacc
     7561 agcactggca gaacaggtca ttccctggct ttcgacaccc gcagttgcag tgctgaaatc
     7621 atgccagcaa caactgacac agccctcaaa ccatgccagc gccgatctac tgccagccat
     7681 agtagtctcc ccaccatgga tttcgaaaaa gaaaaaatcg ccgattccgg tgctggattt
     7741 agcgccatta ggcatcgagc caatctgtta tctgacagaa gaaatcagta atcaactttt
     7801 ggcgaaatat atctggtatt caaaacacat cacggttagc catgaagaaa gtactaccaa
     7861 cctgttggca aggatgggtt ttcaacgacg gatcgctggt acatatatta aagctcccga
     7921 agcggtagtt gaggcatggc taaatgaaga ttattcaacc ttactaagtg aatttaaggt
     7981 gtttcattca cctaccgggc attattggca gttggggatt ttgacaacat tgccgctgga
     8041 gaaagcagta aaagcatgga atgcccttac tctatctcca cataccgata ccgaatacgc
     8101 catgttacat tttggactca aaggtttacc aggtttagtt aactcaatta cacgctatcc
     8161 gcaggaagcc ttgcccatca cgaattactt cgcagcgagt gagctggctc ctgccgtcgc
     8221 ccgcgccttc aacaaactca aaaccctacg acaagacgcc cgtagctggc tgctgaaata
     8281 cccggaacac gccattaccg gcctgctgcc tgccgcgctc ggcaaagccg gtgaagcaca
     8341 ggataacgcc cgcgctgcct tgcgtatgct taccgaaaac ggtcatcagc cattactgca
     8401 agaaatcgcc cggcgttata accagccgga agtaaccaac gcggtaaacg ctctgcttgc
     8461 gctcgatccc ttagataatc acccgacaaa aatccccact cttccggcct tttatcagcc
     8521 atcgctctgg acgcgcccgg tattaaaagc aaacgcccaa tcactgcccg atagcgccct
     8581 actctacctc ggtgaaatgc tccgcttccc tcaggaagag gcactgtatc cgggattatt
     8641 gcaggtgaaa gatgcctgta cccccgactc actggcggga tttgcctggg atctgtttac
     8701 cgcctggctg actacgggtg caccatcgaa agaaagctgg gcgttcactg cgttaggtgt
     8761 tctcggtaac gacgacaccg cccgcaaact gacgccatta atacgcgcct ggcctggcga
     8821 atctcagcat aaacgcgcca ccgttgggtt ggatattctc gctgctatcg gtagtgatat
     8881 cgctctgatg cagcttaaca gcattgccca gaaactaaaa ttcaaagcat tacaggagcg
     8941 ggcgaaagag aaaattgccg acattgccga aagccgcgaa ctcacggtgg cagagcttga
     9001 agatcggtta gcaccggatc tcggtctgga tgataacggt tcgttgctgc tggatttcgg
     9061 ctcacgccag ttcaccgtca gctttgatga aaccttaaaa ccgtttgtgc gtgatgtttc
     9121 tggcagccgt ctgaaagacc tgcccaaacc aaacaaaagc gatgatgaat cacaggcgaa
     9181 cgatgctgtt aaccgctaca aactgctgaa aaaagatgcg cgtaccgtcg ccgcccagca
     9241 ggtagcaagg ctggaatccg ccatgtgcct gcgtcgccgc tggtcaccgg aaaactttca
     9301 gctcttccta gttgagcatc cgctagttcg ccacttaacc cgccgtctga tttggggcgt
     9361 ttatagcgcc gaaaaccagc tgcaggcttg ctttcgcgta gcggaagata acagctacag
     9421 caccgctgac gatgatcttt tcaccctgcc ggaaggcgat atctctgttg gtattcctca
     9481 cgttctggaa atatcaccga cggatgccgc cgcatttggt cagctttttg ccgactacga
     9541 actgttaccg ccgttccgtc agcttgaccg taacagttac gccctgacag aagccgagcg
     9601 caacgccagc gaactgaccc gctgggcagg cagaaaatgc ccgagcggtc gggtaatggg
     9661 gctggcgaat aaaggctgga taaagggcga accacaggat ggaggctgga tcggctggat
     9721 gatcaaacct ctgggccgct ggtcgttaat catgtaaatc gatgaaggtt ttgcggtagg
     9781 catgtcgcca gccgaactga gtgctgagca aatcttaagc aagctgtggc tatggaaagg
     9841 caaagcggaa aactatggct gggggagtaa ttcaacacag gaagcgcagt tctccgtact
     9901 cgatgccatc accgccagcg agctaattaa cgatattgaa gccctgtttg aataaggaaa
     9961 gagcatgaac aaggaattac cgtggctggc tgataacgcc caactggaac tgaaatataa
    10021 aaaaggtgtc tgttatcact gaaagcatca ttcagacact gggtgatgaa ttgctacaaa
    10081 aagctgagaa gaaaaaaaac attgtctggc gttatgaaaa tttttcactg gagtggcagt
    10141 ccgccatcac gcaggccatc aacttgatcg gcgaacacaa accctcagtc ccggcccgga
    10201 caatggcggc gctagcctgt atcgcgcaaa atgacagcca acagttgctc gacgaaatcg
    10261 tccaacaaga ggggctggaa tatgcgactg aggtggtgat tgcacgccag tttattgcgc
    10321 ggtgttatga gagtgatcct ctggtagtga cattgcagta tcaggacgag gattatggct
    10381 atggttatcg ctcagaaacc tataacgaat tcgatctccg actgcgtaag catctctctc
    10441 tggcagagga aagctgctgg cagcgttgcg ccgacaaact cattgccgca ctgccaggaa
    10501 taaccaaagt tcgccgccct tttattgcgc tgatcctccc ggaaaaacca gaaatcgcca
    10561 atgagttggt aggccttgaa tgcccgcgaa ctcattttca ttctaaggag tggttaaaag
    10621 ttgttgctaa tgaccccact gcggtgagaa aacttgaaca ctactggagc caggatatat
    10681 ttagcgatcg agaagccagc tacatgtcgc atgaaaacca cttcggctac gcggcctgcg
    10741 cctccctttt gcgcgaacaa ggactggcag ccgttccgcg cctggcaatg tatgctcata
    10801 aagaagattg cggcagtctg ctggtacaaa ttaaccatcc gcaagtcatc cgcaccttgc
    10861 tgttagttgc tgataaaaac aaacccagcc tgcaacgtgt ggctaaatac agtaaaaact
    10921 tcccccatgc gacactcacc gcactggcag aactgctggc gttaaaagaa ccaccagccc
    10981 gcccaggtta tccaatcatc gaagacaaaa agctgcctgc acagcaaaaa gctcgagatg
    11041 aatactggcg tacactgtta caaacgctga tggcatcgca gccacaactg gcagcagaag
    11101 tgatgccgtg gttaagtact caagcccggg cagtgctgaa gagttattta tcggcaccgc
    11161 ccaaaccggt tattgatggc accgataaca gcaatctgcc agaaatcctc gtttcaccac
    11221 cgtggcgtag taagaaaaaa atgacagctc cacg
//
LOCUS       DAJVTL010000132        11248 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.134, whole genome shotgun sequence.
ACCESSION   DAJVTL010000132 DAJVTL010000000
VERSION     DAJVTL010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11248
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.134"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(36..1223)
                     /gene="ompC"
                     /locus_tag="OQQ26_003484"
     CDS             complement(36..1223)
                     /gene="ompC"
                     /locus_tag="OQQ26_003484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001080666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HCS1858825.1"
                     /translation="MKRKVLAMLVPALLVAGAANAAEVYNKDGNKLDFYGKVAGLHYF
                     SDNSGADGDMSYARIGFKGETQIADQFTGYGQWEYNLQANGTEGDGDNSATRLAFAGL
                     GFGQNGTFDYGRNYGVVYDIEAWTDMLPEFGGDTYAGADNFMNGRTNGVATYRNNGFF
                     GQVDGLNFALQYQGNNEGSGDGFLFGQEGSGSGDGRKLSKENGDGYGMSTSYNFDFGL
                     SFGAAYSNSDRTDEQTKPDFHNTRAGDRNDITAGSETAEAWTVGAKYDANNVYLAAMY
                     AETRNMTGYGDANAIANKTQNFEVVAQYQFDFGLRPSIAYLQSKGKDLGGWAHDGNGD
                     PRYTNKDLVKYVEVGATYYFNKNMSTYVDYKINLLDNDDDFYEANGIATDDIVAVGLV
                     YQF"
     gene            1790..2155
                     /locus_tag="OQQ26_003485"
     CDS             1790..2155
                     /locus_tag="OQQ26_003485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HCS1858826.1"
                     /translation="MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALW
                     AFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL
                     LGSIAWYTRPRPARSRRYE"
     gene            2195..2890
                     /locus_tag="OQQ26_003486"
     CDS             2195..2890
                     /locus_tag="OQQ26_003486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HCS1858827.1"
                     /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD
                     DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH
                     AIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ
                     HRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEG
                     VDHKVIDAFSSAG"
     gene            2957..4375
                     /gene="dcm"
                     /locus_tag="OQQ26_003487"
     CDS             2957..4375
                     /gene="dcm"
                     /locus_tag="OQQ26_003487"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-cytosine methyltransferase"
                     /protein_id="HCS1858828.1"
                     /translation="MQENISVTDSYSTGNAAKAMLEKLLQIYDVKTLVAQLNGVGENH
                     WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG
                     FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEGAAEH
                     IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
                     AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
                     ERIVLVGFRRDFNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
                     YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMATGEKDFDDP
                     LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
                     EPKIKQAVALRQQEAQHGRRSR"
     gene            4356..4826
                     /gene="vsr"
                     /locus_tag="OQQ26_003488"
     CDS             4356..4826
                     /gene="vsr"
                     /locus_tag="OQQ26_003488"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VSPR family DNA mismatch endonuclease"
                     /protein_id="HCS1858829.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
                     SLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
                     RLQELGWRVLIVWECALRGREKLTDEALSERLEEWICGEGASAQIDTQGIHLLA"
     gene            complement(4815..5735)
                     /gene="yedA"
                     /locus_tag="OQQ26_003489"
     CDS             complement(4815..5735)
                     /gene="yedA"
                     /locus_tag="OQQ26_003489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HCS1858830.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LAAGILLLAFLLLRGHKLPPLRPLLNAAVIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
                     SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
                     VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
     gene            5908..6825
                     /locus_tag="OQQ26_003490"
     CDS             5908..6825
                     /locus_tag="OQQ26_003490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HCS1858831.1"
                     /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
                     AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
                     EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVA
                     ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
                     KGLLIIAPWLMKALSIVGTMAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT
                     VLNLILGFIIGGIVVLGVKAVAKIRGQAH"
     gene            6904..7086
                     /locus_tag="OQQ26_003491"
     CDS             6904..7086
                     /locus_tag="OQQ26_003491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2158 domain-containing protein"
                     /protein_id="HCS1858832.1"
                     /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
                     ETELVPGEGSRSAEEV"
     gene            7257..8951
                     /gene="yedQ"
                     /locus_tag="OQQ26_003492"
     CDS             7257..8951
                     /gene="yedQ"
                     /locus_tag="OQQ26_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
                     /protein_id="HCS1858833.1"
                     /translation="MQHETKMENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWRE
                     VVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAV
                     TEFEQHRDEHAWKIELNRRRTLSVNGVSDALVSEGNLLSRENESLDNEITAALEVGYL
                     LRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRH
                     RAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLD
                     GEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERL
                     DHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQS
                     SLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQ
                     AGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKE
                     MLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVCASDNA"
     gene            complement(8948..9762)
                     /locus_tag="OQQ26_003493"
                     /pseudo
     CDS             complement(8948..9762)
                     /locus_tag="OQQ26_003493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310720.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
     gene            complement(10060..10287)
                     /gene="yodD"
                     /locus_tag="OQQ26_003494"
     CDS             complement(10060..10287)
                     /gene="yodD"
                     /locus_tag="OQQ26_003494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid resistance protein YodD"
                     /protein_id="HCS1858834.1"
                     /translation="MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHV
                     SVDGREYHTWRELADAFELDIHDFSVSEVNR"
     gene            10450..10638
                     /gene="dsrB"
                     /locus_tag="OQQ26_003495"
     CDS             10450..10638
                     /gene="dsrB"
                     /locus_tag="OQQ26_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HCS1858835.1"
                     /translation="MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGI
                     WFFNEAGHQDGIFVEKAE"
     gene            complement(10682..>11248)
                     /gene="rcsA"
                     /locus_tag="OQQ26_003496"
     CDS             complement(10682..>11248)
                     /gene="rcsA"
                     /locus_tag="OQQ26_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HCS1858836.1"
                     /translation="LLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS
                     NSQRIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL
                     KKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK
                     IKTHNKQVIYHVVRLTDNVTNGIFVNMR"
BASE COUNT         2859 a         2669 c         2908 g         2812 t
ORIGIN      
        1 tgttttacag taacacgccg cggcgcgttg actgattaga actggtagac taagcccaca
       61 gcaacgatat catcggtagc gatgccgttt gcttcgtaga agtcatcgtc gttgtccagc
      121 aggttgattt tgtaatcaac gtaggtggac atgtttttgt tgaagtagta ggtcgcaccg
      181 acttcaacgt atttaaccag atctttgttg gtgtaacgcg gatcgccatt accatcatga
      241 gcccaaccgc ctaaatcctt acctttagat tgcaggtaag cgatggacgg gcgcaggccg
      301 aagtcgaact gatactgagc aacaacttca aagttttggg ttttgttagc gatggcatta
      361 gcatcaccgt aaccagtcat gttacgggtt tcagcataca tagctgctaa gtaaacgtta
      421 ttagcgtcgt atttagcacc aacggtccat gcttctgctg tttcactgcc agcagttata
      481 tcatttctat caccggcacg ggtattatgg aaatcaggct ttgtttgctc atcagtacgg
      541 tcagaattgg agtaagcagc accgaaactt aacccgaagt caaagttata ggaggttgac
      601 ataccataac cgtcaccatt ctctttagaa agtttacgac catcgccgct accggagcct
      661 tcctgaccaa agaggaaacc gtccccggaa ccttcattat taccctgata ttgcagagca
      721 aagttcagac catcaacctg accgaagaag ccattgttac ggtaggttgc aacaccgttg
      781 gtacgaccgt tcatgaagtt gtcggcaccc gcgtaggtat cgccaccaaa ttctggcagc
      841 atatcggtcc atgcttcgat gtcatataca acaccgtagt tacgaccata atcgaaagta
      901 ccattctgac caaaacctaa acctgcgaat gccagacggg tagcagagtt atctccatcg
      961 ccttctgtgc catttgcttg caggttgtat tcccactgac cgtaaccagt gaactggtca
     1021 gcgatttgtg tttcgccttt gaaaccgata cgggcatatg acatatcgcc atcagcgccc
     1081 gagttgtcag agaagtagtg cagacctgct acttttccgt agaaatccag tttattacca
     1141 tctttattat agacttcagc cgcatttgct gcgccagcaa ctaataacgc cgggaccagc
     1201 attgccagaa cttttctttt cattatgtat tcccttgtga ttataatctt catgaatata
     1261 tcaataagtg ccgttatcca aaaaaaagca catttggata ctattctatg aagttcattt
     1321 tattttaaag attacatgca acaaatgtat ttaaaagaat ttaaaatgtt tctaatctat
     1381 ttaatataat tcagaattat gaattctaaa tataaatatt catgaaaatt ataaatgcat
     1441 atcaatatgt tatgggttga gcggaaacat agggggtatc aatgattgtt gcgccaaacg
     1501 gctggtgtga tcaggcgcac attaatgaag gcataaaaaa aagccggcat catgccggcc
     1561 ccaaaaatat aaacaagacg ataaaaggct aataacggaa gcatcatgac acagaataat
     1621 aaaaaggtat aattgtaatc agtgctaata tattgattaa atgaattaat aaagccgata
     1681 tcaaagataa ataaaatcgc tcaaaacgat ttttcctgta ttcactgccg ttgcgcaaaa
     1741 attatctatt tgttcaaaaa atgagtgagt cttgactggc tcatccaatg tggaaaaatg
     1801 tgacttttat cacataatag tactaagtct gaattttccg ggttatctca aaatggaata
     1861 cggttcgaca aagatggaag agagactctc tcgcagccct ggcggcaaac tggctttgtg
     1921 ggctttctat acatggtgtg gctatttcgt ctgggcaatg gcgcgttaca tctgggtgat
     1981 gagccggatc cccgatgccc ccgtgtcggg atttgaaagc gatttaggct ctaccgcggg
     2041 aaagtggtta ggggcactgg tcggattttt atttatggct ctggtcgggg cattgttagg
     2101 cagcattgcc tggtacaccc gacctcgtcc cgcacgtagc agacgctatg aataaaaact
     2161 gctaaggtgg cgactctttg gcaacggagc gcgtatggac ttacaacact ggcaggcaca
     2221 gttcgaaaac tggttgaaaa accatcatca gcaccaggac gcggcccatg acgtgtgtca
     2281 ttttcgccgc gtctgggcta cggcacagaa gctggcggca gatgacgatg tcgatatgct
     2341 ggtgatttta accgcctgtt attttcacga tattgtgagc ctggcgaaaa atcatccgca
     2401 aaggcagcgt tcttcaatcc tggcggcaga agagacgcgt cgcctgctcc gtgaagagtt
     2461 cgagcaattt ccggcggaga aaatcgaggc cgtttgtcat gccattgccg ctcacagttt
     2521 cagcgcgcaa atcgccccct taacaacgga agctaaaatc gtccaggatg cggatcggct
     2581 ggaagccctg ggggcgattg gcctggcgcg cgtgtttgcc gtttcagggg cattgggcgt
     2641 ggcgctgttt gatggtgaag atccgttcgc acagcatcgc ccgcttgatg ataaacgcta
     2701 cgcgctggat catttccaga ctaagttgct gaagctaccg caaaccatgc aaaccgcaag
     2761 aggcaagcag ctggcgcagc acaacgcgca ttttttagtc gagtttatgg cgaagctcag
     2821 tgccgaactg gcgggggaga atgaaggtgt cgatcacaag gtgatagatg cgttttcatc
     2881 cgctggctga gcgcgtggcc ctaaatggct gtaattatgt taacctgtcg gccatctcag
     2941 atggccggtg aaatctatgc aggaaaatat atcagtaacc gattcataca gcaccgggaa
     3001 tgccgcaaag gcaatgctgg agaaactgct gcaaatttat gatgttaaaa cgctggtggc
     3061 gcagcttaat ggtgtaggtg agaatcactg gagcgcggca attttaaaac gtgcgctggc
     3121 gaatgactcg gcatggcacc gtttaagtga gaaagagttc gcccatctgc aaacgttgtt
     3181 acccaaacca ccggcacatc atccgcatta tgcgtttcgc tttatcgatc tatttgccgg
     3241 aattggcggc atccgtcgcg gttttgaatc gattggcgga cagtgcgtgt ttaccagcga
     3301 atggaacaaa catgcggtac gtacttataa agccaaccat tattgcgacc cggcgacgca
     3361 tcattttaat gaagatatcc gcgacatcac cctcagccat aaagaaggcg tgagtgatga
     3421 gggggcggcg gaacatattc gtcaacacat tcctgaacac gatgttttac tggctggttt
     3481 cccttgtcag ccattttcgc tggctggcgt atcgaaaaag aactcgctcg ggcgggcgca
     3541 cggttttgcc tgcgataccc agggcacgct gttttttgat gtggtgcgca ttatcgacgc
     3601 gcgtcgtccg gcgatgtttg tgctcgaaaa cgtcaaaaac ctgaaaagtc acgaccaggg
     3661 taaaacgttt cgcatcatca tgcagacgct ggacgaactg ggctatgacg tggctgatgc
     3721 agaagataac gggccggacg atccgaaaat catcgatggt aaacattttc tgccgcagca
     3781 ccgtgaacgc atcgtgctgg tgggttttcg tcgcgatttt aatctgaaag ccgattttac
     3841 tctgcgtgat atcagcgaat gtttccctgc acagcgagtg acgctggcgc agctgttgga
     3901 cccgatggtc gaggcgaaat atatcctgac gccggtgctg tggaagtacc tctatcgata
     3961 tgcgaaaaaa catcaggcgc gcggtaacgg cttcggttat ggaatggttt atccgaacaa
     4021 tccgcaaagc gtcacgcgta cgctgtctgc gcgttattac aaagatggcg cggaaatttt
     4081 aatcgatcgc ggctgggata tggccacggg tgagaaagac tttgacgatc cgctgaatca
     4141 gcaacatcgt ccacgtcggt taacgcctcg ggaatgcgcg cgcttaatgg gttttgaagc
     4201 gccgggagaa gcgaaattcc gcattccggt ttcggacact caggcctatc gccagttcgg
     4261 taactcggtg gtcgtgccgg tctttgccgc ggtggcaaaa ctgcttgagc caaaaatcaa
     4321 acaggcggtg gcgttgcgtc agcaagaggc acaacatggc cgacgttcac gataaggcca
     4381 ctcgcagcaa aaatatgcgc gcgattgcca cgcgtgatac ggcgattgag aagcgcctcg
     4441 ccagtctgtt aaccgggcag ggcctggcgt ttcgcgttca ggacgccagt ctgcccggac
     4501 gcccggattt tgtcgttgat gaatatcgtt gcgtgatatt tacccacggc tgcttctggc
     4561 atcatcatca ctgctatctg tttaaagtgc ctgcgactcg aaccgagttc tggctggaga
     4621 agataggtaa aaatgttgag cgcgatcgcc gcgatatcag tcgcttgcag gaactcggct
     4681 ggcgcgtatt gattgtctgg gagtgcgcgt tacgtgggcg cgagaagctg acggatgaag
     4741 cgcttagcga gcgtctggaa gagtggatct gcggcgaagg tgccagcgcg cagatcgaca
     4801 cgcaggggat tcatttactc gcttgatgcg tcctgaataa ctggcgcaac tacgggtttt
     4861 gccgggaaga gatattttcc caacgtgacc agtaccaccg cgaagacaat tacgccgagc
     4921 gccagccatt caatcttcga cagcgtttct ccgcccagtc ccgtacccag caagaccgcg
     4981 accaccgggt taacgtaggc gtagctggtg gcgagagccg gactgacgtt gcggattaaa
     5041 tacatataag cgttaatggc gataatcgaa ccaaacagcg ccagatagcc gactgcaagg
     5101 aagcctgaaa gggaagggag tgccgtcagt ttttcacctg caatcatcga cgcgatcatt
     5161 aacaccacgc ctgccgccag catctcaatc gcacccgcca tcatccctac aggtaaggta
     5221 atgcgcgagc cataaaccga gccaaacgcc cagctaatcg agccgattaa aatcagaatc
     5281 gcgccccacg gattgccgct taaatttcca ccgctattga gcatgatgat tccggcaagc
     5341 ccaatggcga tacccaccca ttccagtttg cgcgttttaa tgccaaacag gcggctgaag
     5401 cacagggtaa agaggggcac ggttgcaacc acaacggcgg cgatgccgga aggaacattt
     5461 tgatgctcgg caaccgtcac catgccatta ccgacagcca gcaataacag gccaatcacc
     5521 gcggcattga gcagcggacg tagcgggggg agtttgtgtc cgcgcagtag caaaaatgcc
     5581 agcaataaaa taccggctgc caggaatcga acgcccgcca tcattaacgg aggccagctt
     5641 tccacgccaa tccgaatgac aaaataggtt gagccccaaa tgatatacaa cgcaaacagc
     5701 gcgccaaaaa gcggtaacaa ctggcggaaa cgcataatcc ctcacggtgg aaataaaaag
     5761 gtggttcata gtaaacgtga aaatcattct gctggcgaga gatataattg cacttgattg
     5821 ttaaaaaaat gttgacctgt gaagcaagta tcagagctgc cgtttttgct tcatacttac
     5881 acccttcaac aataaaaatg agagggaatg cttttggccg ggagtagttt actgacgttg
     5941 ctcgatgata tcgccacact actggacgat atctccgtga tgggcaaact ggcggcgaag
     6001 aaaaccgccg gtgtattagg ggatgactta tcgctcaatg cgcaacaagt ttcaggcgtg
     6061 cgggccaacc gggaacttcc cgtggtctgg ggcgtggcga aaggatcgct gattaataaa
     6121 gtgattctgg tgccgctggc gctgatcatc agtgcgttta tcccgtgggc gattacgcct
     6181 ctgttgatga ttggtggcgc gtttctctgc tttgaaggag tagagaaagt gctgcatatg
     6241 ctggaggcgc gtaaacataa agaagatccg gcgcagagcc agcagcgtct ggagaagctg
     6301 gcggcgcagg atccgctgaa gtttgaaaag gacaaaataa aaggggcgat tcgtaccgat
     6361 tttatattgt ctgccgaaat cgtcgccatc acgctgggga ttgtggccga agcgccgttg
     6421 cttaatcagg tgctggtgct ttcaggcatc gcgctggtag tgaccgtggg cgtctacggt
     6481 ctggtagggg ttatcgttaa gattgatgac ctggggtatt ggctggcgga aaaatccagc
     6541 gcgctgatgc aggcattagg taaagggtta ttgatcattg cgccctggct gatgaaagcg
     6601 ttatcgattg tcggcacgat ggcgatgttc ctcgtcggcg gtgggattgt ggtacatgga
     6661 attgcgccgc tgcatcacgc cattgaacat ttcgccgggc agcaaagtgc agtggtggcg
     6721 atgatattac cgactgtttt aaatctgatt cttggattta tcatcggcgg catcgtggtg
     6781 ctgggagtga aagccgtagc gaaaatacgc ggtcaggcac attaatactc gcacaggcta
     6841 ttatgcaaaa ttcgccatct tcaactaagg tgaacaagtt tcactcgaaa aaaggaggcg
     6901 agtatgagct ttatggttag tgaggaagtt acggttaaag agggcggccc gcggatgatt
     6961 gtcaccggat actccagcgg tatggttgag tgtcgttggt atgacggtta cggggtcaag
     7021 cgggaagctt ttcatgaaac cgagcttgtt ccgggggagg ggagtcgttc tgcggaagaa
     7081 gtttgaaagg gtatcattaa caccaggccg gatcacatcc ggcctggtgt gccaatgcct
     7141 gcaatgaatg atagtcgcgt cttatcatgc caccattata aaattatcgc tgttttgcgg
     7201 tacgctatcg ccaggttatg ccagaatcat aaaaaagcag gttgggagtc gtcagggtgc
     7261 agcacgagac aaaaatggaa aaccagagct ggttgaaaaa actcgcacgc cgcttggggc
     7321 ctggtcatat cgttaatctc tgctttatcg tggtattgct tttttccacc ttgctgacct
     7381 ggcgtgaagt ggtagtgctg gaagatgcct atatctccag ccagcgtaat catctggaaa
     7441 acgtagccaa cgcgctcgat aagcatttgc agtataacgt cgacaaactg atctttttgc
     7501 gtaatggcat gcgcgaagct ctcgtagcgc cactggattt cacctctctg cgtgatgctg
     7561 taaccgagtt cgaacagcat cgcgacgagc acgcctggaa aatcgaactc aaccgacgac
     7621 gcaccctgtc agtcaatggc gtatcggatg cattagtcag cgaggggaat ctcctgtctc
     7681 gcgaaaatga aagcctcgac aatgaaatta ccgctgcact ggaagttggt tacttgctgc
     7741 gactggcaca caactcctcg tcgatggttg aacaggcgat gtatgtctcg cgtgccggat
     7801 tttacgtttc gacgcagccg accttgttta cgcgcaatgt cccgacgcgt tattacggct
     7861 atgtcaccca accctggttt atcggccatt cgcaacgaga aaatcgtcac cgcgcggtac
     7921 gctggttcac ttcgcaaccg gaacacgcca gcaatactga accgcaggtt accgtcagtg
     7981 ttccggtaga cagtaataac tactggtatg gcgtgctggg gatgagtatt cccgtgcgta
     8041 ccatgcagca atttttaaga aacgccatcg ataaaaacct cgatggtgag tatcagctct
     8101 atgacagtaa gctgagattt ttgacctctt ccaatcctga ccatccaaca gggaatattt
     8161 ttgatcctcg tgaactggcc ttgctggcac aggcgatgga acatgacacg cggggcggca
     8221 ttcgtatgga cagtcgctat gttagctggg aacgtctgga ccatttcgac ggtgtgctgg
     8281 tgcgcgtcca tacgctaagc gaaggcgtgc gcggcgattt cggcagtatc agcattgcat
     8341 taaccctgct gtgggcgctc tttaccacca tgttactcat ctcctggtat gtgattcgcc
     8401 ggatggttag caacatgtat gttctgcaaa gctcgttgca gtggcaggcg tggcacgaca
     8461 ccttaacccg tttatataat cgtggcgcac tgtttgaaaa agcccgtccg ctcgcgaaat
     8521 tgtgtcagac gcaccaacat cctttttctg tcattcaggt cgaccttgac cattttaaag
     8581 cgattaatga ccgctttggt catcaggcgg gcgaccgtgt tctttctcat gctgccggat
     8641 taattagcag ttccttgcgt gcgcaggacg ttgccgggcg ggtcggtggt gaggagtttt
     8701 gtgtgattct gccaggcgcg agtctgacgg aggctgcgga agtcgcagaa cgtattcgcc
     8761 tgaagttgaa tgaaaaagag atgttgatcg ccaagagtac gacgatacgc atcagtgcct
     8821 cgctgggggt aagcagcagc gaggaaaccg gtgattatga ttttgaacaa ctccagtcac
     8881 tggctgaccg tcggctttat ctcgctaaac aggccgggcg taatcgggta tgcgcgagcg
     8941 ataacgctta acgtgcggag aaaaaatggt ccagcccttc acgccagcct tccggtcctt
     9001 cacgctgcgt tcgccagacg cgggccggat cctcatcatg cagatgcacc ccttcacggt
     9061 ttagcccttt cacaatcacc gcgtaatcca ttacctccag caagggcgca tcgtttggcc
     9121 catcgcccag gccaagtgtg gttgggcgtt tgcctgataa ttgttgatag gtcgcgataa
     9181 tccagttggc agcctgatct tttccggcag aggcatccag gacgtgccag aagcgcgcac
     9241 cctgcataaa ctgtaagccc agttcgttca gacgaacggt aaattgtgcc atacgctcgt
     9301 cactgtcgcg ccagattagc gttaccgacg cctcatgtag ctgcgtcagc gccgcctggc
     9361 tacggcttaa tcccgtccat tcggcgatgg ttgcatcgtc gacatcatca aagttgtgaa
     9421 tttaaaatgt tctttctcgc gtagcgtatt taaaacctgg ctgatttcgc catggctaat
     9481 acctgagatg atgcgtggaa aaccgtctat atcctgccat tgttcagcaa gctggatcac
     9541 tgcgccattt tcggcaatca gcggtaaccc ttgtagcccc aacgtttttt gcaagtacag
     9601 catttccgct gaagttttac tgctacagag aatgacggga acattcgctt cgcgtaaacg
     9661 gctgagccag ggggcagccg gttgccagtc ataactatga ctggccagca gggtgccatc
     9721 aagatcgcta aaaaccagta gtggttgttg aattgaaaac atggtcgcgc agttctcccc
     9781 ttacctggat gattctcaaa acagcacaaa taatcaaaga tgattttttc gggagcgatc
     9841 ccgttgacgc cagagccacc aaggggtgac gcacgtcaca tttctattca taagtagcgt
     9901 taatcattca tatcgcgaat attttcttgt cagcgaaaaa aattgcggat aaggtgatga
     9961 acacatcaga tttcctggtg taacgaattt tttaagtgct tcttgcttaa gcaagtttca
    10021 tcccgacccc ctcagggtcg ggattttttt attgtgcatt caacgattca cttcagagac
    10081 gctgaagtca tgaatatcca gttcgaaggc atccgccaat tcacgccatg tatgatattc
    10141 acgtccatcg acgctaacgt gttcagaatc gttctggctg cgatgaactt cgctttcgct
    10201 aatttcattg atcgccgcca gcagggcatc gacatcgacg ctgacctcac gttttgcggt
    10261 atcgctgtac tcttttgcgg ttttcatcat ctttcctcgc aaccgttact ctgttgttgc
    10321 cgccagtcgt taagtccgcc tggcatctct taagtataga ccgtcgagaa aatcagcact
    10381 cgcgcgcgcc tggcgctgcc agaaaaacga aattgttcta cactggcaca aagccacagg
    10441 aggaaaacga tgaaggtgaa tgatcgggta acagtcaaaa cggatggcgg tccgcgtcgt
    10501 cctggcgtgg tactggcagt tgaggagttt agtgaaggca caatgtacct ggtttcgctg
    10561 gaagactacc cgctcggcat ctggttcttt aatgaagcag ggcatcagga cggtatcttt
    10621 gtggagaaag cagagtaatc ttattcagcc tgactggtgg gaaaccacca gtcagaatgt
    10681 gttagcgcat gttgacaaaa ataccattag tcacattatc cgtcagtcgg acgacatggt
    10741 agataacctg tttattatgc gttttgatct tacgtttaat attaccttta tgcgatgaaa
    10801 cggtcttggc tttgatattc atttggtcag agatttgaat ggttccctga cctgccatcc
    10861 acattcgcaa catactcgat tcggttcggc tcaatgataa cgtcggcata tttaaaaaag
    10921 aggttatcgt tgtctctttt ttcagaatat cgccaaggat atcgtcgaga gattccggtt
    10981 taatcgattt agaacttatc aataaatttt ttctgaccaa tagatattca tcaaaatgaa
    11041 cattggcaat tgccataaaa acgataaata acgtattggg atgttgatta atgatgtgct
    11101 tgatgcgctg actgttagaa gcatcatgga tgaaacagtc ctcattaata aacaccactg
    11161 aagggcgctg tgaatcacaa gctatggcaa ggtcatcaac ggtttcaatg tcgttgattt
    11221 ctcttttttt aacccctcta ctcaacag
//
LOCUS       DAJVTL010000133        11106 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.135, whole genome shotgun sequence.
ACCESSION   DAJVTL010000133 DAJVTL010000000
VERSION     DAJVTL010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11106
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.135"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            43..390
                     /locus_tag="OQQ26_003497"
     CDS             43..390
                     /locus_tag="OQQ26_003497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005069111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HCS1858837.1"
                     /translation="MILDSRPVHAACPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFI
                     GSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEI
                     GAVPAIPQQSSLF"
     gene            443..838
                     /locus_tag="OQQ26_003498"
     CDS             443..838
                     /locus_tag="OQQ26_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310606.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HCS1858838.1"
                     /translation="MVSALYAVLSALLLMKFSFDVVRLRLQYRVAYGDGGFSELQSAI
                     RIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRS
                     GMSATWCALLLMVLANLWYMPWELVFSLR"
     gene            879..1622
                     /gene="cmoA"
                     /locus_tag="OQQ26_003499"
     CDS             879..1622
                     /gene="cmoA"
                     /locus_tag="OQQ26_003499"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HCS1858839.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
                     DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     HKAGFEHSELWFQCFNFGSLVALKAEDAA"
     gene            1619..2590
                     /gene="cmoB"
                     /locus_tag="OQQ26_003500"
     CDS             1619..2590
                     /gene="cmoB"
                     /locus_tag="OQQ26_003500"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HCS1858840.1"
                     /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
                     AVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVS
                     VTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIARKP"
     gene            complement(2755..5184)
                     /gene="torZ"
                     /locus_tag="OQQ26_003501"
                     /pseudo
     CDS             complement(2755..5184)
                     /gene="torZ"
                     /locus_tag="OQQ26_003501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416386.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine N-oxide reductase TorZ"
     gene            complement(5209..6309)
                     /locus_tag="OQQ26_003502"
     CDS             complement(5209..6309)
                     /locus_tag="OQQ26_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HCS1858841.1"
                     /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
                     MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS
                     DDKFETHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGET
                     CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSRIGELATVNPGTD
                     LTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALATLSEEGIKALTVNGEWQADE
                     YGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIA
                     KGMGARTSMSENELDILTLYFQYNAKDITEKQ"
     gene            complement(6697..7443)
                     /gene="cutC"
                     /locus_tag="OQQ26_003503"
     CDS             complement(6697..7443)
                     /gene="cutC"
                     /locus_tag="OQQ26_003503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HCS1858842.1"
                     /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
                     SVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD
                     MPRMEKIMAAAGPLAVTFHRAFDMCANRLNTLNNLAELGIARVLTSGQKSDALQGLSK
                     IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
                     DAHADEYSRYVVDGAAVAEMKGIIERHQAK"
     gene            complement(7457..8023)
                     /locus_tag="OQQ26_003504"
     CDS             complement(7457..8023)
                     /locus_tag="OQQ26_003504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310612.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCS1858843.1"
                     /translation="MANWQSIDELQDIASDLPRFTHALDELSRRLGLNITPLTADHIS
                     LRCHQNVTAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG
                     EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNP
                     TLAVTDGKTTIKFHPWSIEEIVASEQSA"
     gene            8239..9972
                     /gene="argS"
                     /locus_tag="OQQ26_003505"
     CDS             8239..9972
                     /gene="argS"
                     /locus_tag="OQQ26_003505"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HCS1858844.1"
                     /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
                     DRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
                     SGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAAPVIIREDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            10149..10637
                     /locus_tag="OQQ26_003506"
     CDS             10149..10637
                     /locus_tag="OQQ26_003506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HCS1858845.1"
                     /translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDT
                     DINVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGAKKPDTEQLNLLKKSQRAWL
                     DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLT
                     RG"
     gene            complement(10759..>11106)
                     /gene="flhe"
                     /locus_tag="OQQ26_003507"
     CDS             complement(10759..>11106)
                     /gene="flhe"
                     /locus_tag="OQQ26_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HCS1858846.1"
                     /translation="AAGEGMWQASSVGITLNHRGESMSSAPLSTRQPASGLMTLVAWR
                     YQLIGPTPAGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPLRFIWEVPGGGRLIPP
                     LKVQRNEVIVNYR"
BASE COUNT         2714 a         2837 c         2667 g         2888 t
ORIGIN      
        1 agtttaggaa ccatctgaaa taagaggtgc atttagacct tgatgatttt agacagccgc
       61 ccggttcatg cagcatgtcc acacagtgaa gctattcgcg acgctcaacg aaaaaaacct
      121 aaagttccgg tacatgctgt actgacggcg acaaatccgc tgatccgttt tatcggtagt
      181 gatgatatga cgcaaaaccg ggaattattt caggtctggt tacaaaaatt agcgcagtgg
      241 catcagacca ctacgcctta tcttttttta catacgccag atattgccca ggccccggaa
      301 ctggtacata ccctgtggga agacttacgt aaaacgcttc cagagatcgg agcagttccg
      361 gctattccac agcaatcttc tcttttctga atttgccacc tatcatagac aggtgccatc
      421 ggccatttta aagggagttt gtatggtaag cgcgctgtat gccgtgttaa gtgcgttgtt
      481 attaatgaag ttctcttttg atgtcgttcg cttgcgtttg cagtaccgcg ttgcctatgg
      541 cgacggcggt tttagcgaac tgcaaagcgc tattcgcatt catggtaacg cggtggaata
      601 tattcccatt gcgattgtgc tgatgctgtt tatggaaatg aatggcgcag aaacctggat
      661 ggtgcatatt tgcggcatcg ttttgcttgc tggtcgtctg atgcattatt acggttttca
      721 tcaccgtctg ttccgctggc gacgttccgg catgagcgcc acctggtgtg cgctgttgct
      781 gatggtgctg gcgaatctat ggtatatgcc ctgggagttg gttttctccc tgcgttagcg
      841 cacaatacgc cactttcttt ttcccggatt tttacgttat gtctcaccgc gacacgctat
      901 tttctgcccc tatcgccaga ctgggcgact ggacctttga tgaacgggta gctgaagtct
      961 tcccggatat gatccagcgt tccgttcccg gctattccaa tattatttcc atgattggta
     1021 tgttagccga gcgcttcgtt caacctggta cgcaggttta cgatctgggt tgttctctgg
     1081 gcgcggcgac gctctcggtg cgtcgcaaca ttcatcatga taattgcaaa attattgcca
     1141 tcgacaactc cccggcgatg attgaacgct gccgtcgtca tattgacgcc tataaagccc
     1201 ctacgccagt agacgtcatt gaaggcgata ttcgcgatat cgccattgaa aacgcatcaa
     1261 tggtggtgct gaattttacc ctgcaattcc tggaaccttc cgagcgccag gcgttactgg
     1321 ataaaattta tcaagggctg aacccgggcg gcgcgctggt gctttcggaa aaattcagtt
     1381 tcgaagatgc caaagttggt gaactgttgt tcaacatgca ccacgacttt aaacgtgcca
     1441 acggttacag cgaactggag atcagccaga agcgcagcat gctggaaaac gtgatgctga
     1501 ccgattccgt ggaaacccat aaagcacgcc tgcataaagc tggttttgaa catagtgagc
     1561 tgtggttcca gtgctttaac tttggttcac tggtggcatt aaaagcagag gacgctgcat
     1621 gatcgacttt ggtaactttt attctctgat tgccaaaaat catctttcac actggctcga
     1681 aacgctgccc gcgcagattg cgaactggca gcgcgagcag cagcacgggc tgtttaagca
     1741 gtggtccaac gcggtggaat ttctgcctga aattaaaccg tatcgtctgg atttattgca
     1801 tagcgtaacc gccgaaagcg aagagccact gagcgccggg caaattaaac gcattgaaac
     1861 gctgatgcgc aacctgatgc cgtggcgcaa agggccgttc tcactgtatg gcgtcaacat
     1921 cgataccgaa tggcgttccg actggaaatg ggatcgtgtt ctgccccatc tttctgattt
     1981 aaccggacgc accattctgg atgtcggctg cggcagcggt tatcacatgt ggcgcatgat
     2041 tggcgcaggc gcgcacctcg cggtggggat cgaccctacg caactgtttc tgtgccagtt
     2101 tgaagcggtg cgtaaactac tgggtaacga tcagcgcgca catttgttac cgttaggtat
     2161 tgaacagctt ccggcactga aagcctttga taccgtcttt tcgatgggcg tgctttatca
     2221 tcgtcgttca ccgctggagc atctctggca gttgaaagat caactggtca atgaaggtga
     2281 actggtgctt gaaacgctgg ttattgatgg tgatgagaac acggtgctgg taccaggcga
     2341 tcgttacgcg caaatgcgta atgtctattt catcccttcc gcgctggcgc tgaaaaactg
     2401 gctgaaaaag tgtggttttg tagatatccg cattgcggat gtgagcgtta ccactacaga
     2461 agagcaacga cgcactgaat ggatggttac tgaatcgctg gccgatttcc tcgacccaca
     2521 tgatccgggt aaaacggttg aaggttatcc tgcgcctaaa cgcgcggtgc tgattgcgcg
     2581 taagccgtaa aggtctggta ttactgccgg atgcggcgtg aacgccttat ccggcctaca
     2641 aaaccttgct aattcaatac attgcaggga ctatgtaggc ctgataagca tagcgcatca
     2701 ggcagttttg cgtttgcata acctcagcgc ccgtttccgg gcgctattca cttcttacgc
     2761 ctgaacagct ggctgatcaa acgccgttaa cttcggcgca ttgcccgtat atttttcgat
     2821 atacaccagc gcagagttac cggcacaggc attcgccagc tgcgagctgg ggatatccgc
     2881 cgttaacacg ttcgcactgc cgtttttaca taagccattt tccagatctg gccatgcacc
     2941 ttcatgcacg cataccacgc cttttttgat cccgtcagtc accacagcgc ctgtcaggat
     3001 ctgaccacgt ttgttccaga cacgcaccag atcgccattc gcaataccaa agcgagcagc
     3061 atcttcggtg tgaatagtga ttggttcacg atcggcaatc gcatattttt tacgcagttc
     3121 cgcatagtta agctgactat gtaaacggtg tgccggatgt gcggtcagaa gctgcaactg
     3181 cttctcgtcg gcggtaccct tccactcatc aggcgcaagc caggttgggt gtgccgggca
     3241 atccttatag ccaaattttt ccagcgtttt ggagtaaatc tcaattttgc cgcttggcgt
     3301 acccagcgca tttttcaccg gatcggcgcg gaaatcagca taacgaacgt actgttcgtt
     3361 cttctcgctg cggcgcattt cgatcagttt attttgctgc cagaaggcat taaacatcgg
     3421 catagtcacg cgttgcgcac gggcaccttt ctgagcggca tcatagaaaa atttcagcca
     3481 cgccatttca tctttatctt cggtatagat ctcttttccg ccaggtttca gtaattccgc
     3541 aagatcggca aacacatcaa aatcgtttcg cgcttcaaat tgcggagcga cagcctgctt
     3601 catcggcaca atatgctggt tgctgtaatc accggtcatc gtcaagtcat tgcgctcaaa
     3661 cgatgtggtg atcggtaata cgatatctgc atgtttagca gctgcggtcc agtagcattc
     3721 agaaacgacg atcatctccg gtttctgcca ggctttgatc agacgattag tatcctagtg
     3781 atgggtaaag ttaccgccac ccgcccacca gatcattttg atattcggat acgtttgttc
     3841 tttaccgtta tgctgatatt tgccgccagg attttccagc gcatcgacga tacgggcaac
     3901 aggaatcgcc gtcattccgc catcatcagc ggcctcgctg gcctgtccgg caatcgccgc
     3961 agacatttcc ggcagcacgc cgccaacacg cgtcggattg ccaccgttgg agtaatgata
     4021 agagaaacca aaaccgccgc ccggtgtacc gatctgccct aacatcgccg ccagcgtcac
     4081 cagcatccag tgtttctgtt caccatattg ctggcgctga attccccagc cagccatcag
     4141 cattgtgcga ttcgccgcca tcagttcagc gagtttgact atctgcgctt ccggtacgcc
     4201 aataatttcc gccgcccagg ccgcgctctt cggagtatta tcgctcttac ctgtcagata
     4261 ctcttcaaac tgcggatacc cggtggtgta tttttcaagg aacactttat cgtgtttgcc
     4321 ttgtgtcatc agggtatgcg caatccctaa catcagtgcc acgtcggtgc ccatattcgg
     4381 cgcgatccag gtggcattat cgccaaagaa ctcgatggtt tcggagcgga taggatcaat
     4441 ggcaatcact ggtttgccag attttttcag ctgatggaag tattccagcc cttgctcatc
     4501 ggtactgctc caggcaattt ttaaggtatt cagcgggttc atcccccaca gcaccacaac
     4561 ctggctgttt tccagaatca gcggccagga ggtctgctgt tcatacacct ctacagaacc
     4621 gaccacatgc ggcatgatca cctgtgctgc cccggttgaa taatcgccgc tatgcccgga
     4681 ataaccgcct gccaggttca tataacgttg cagtaacgtt tgcgctttat gcaacacgcc
     4741 agaagagcgc cagccgtaag atccggcaaa aatagccgat ggtccgttag ctttgcgaat
     4801 gcgatcgtgt tgctcatgaa tcagttttaa tgcttgttcc cagctcacct gtacataggt
     4861 atcttcgcca cgacctttcg tcggttgcag tggattatcg agatagcttt ttctcaccat
     4921 cggatgctga atacgcgccg tggtgtgtac ctgatccgcc gccgtagact gtaaggaatt
     4981 cggtatggtt ttcgccagcg cgcctgttga agaaacaatc ttgccgtcct tcacttctac
     5041 gttcatcgct ccccaacgtc ccgcggtgag gattttaccg cccttctctt ctgcccatgc
     5101 ggggagcggt gctgccgatg tcaccaccag cgctccagcg gcaataccgc tgtgtttaat
     5161 aaattcacgt cttgttaatg tcataacttc ctccctgatc aacgaggatc actgtttctc
     5221 ggtaatatct ttggcgttgt actggaagta caacgtcaaa atgtccagtt cgttttcgct
     5281 catgctggtt cgtgccccca ttcctttggc aatggacggc cacgcattga cggtgtaatg
     5341 gtcggcggca ataggggcat ggcaaccagc gcaataggta tcgtcaagtt tttcagcgta
     5401 ttgccatagc ggtttacggt ccgctaatgc gggatcggtt agcgcaccct gtaaagacgc
     5461 ctgacgccat tgattgccgt attcgtcagc ctgccattcc ccgtttaccg tgagcgcctt
     5521 gataccttct tcacttaatg tggctagcgc cagccgttga cctgccgcca ggtagagcgt
     5581 gttttcactg ccctgcattt gataaccctg caacagaacg atcggctgtt tgccactggc
     5641 atcaacgacg gtgagatcgg taccaggatt cacggtagcc agctcgccta tgcgagaagt
     5701 tttgaaagga taaatatgtg cgccattagt cactgaagta gcggcctgac tttccagctc
     5761 atgcgccgcg ttgtcatcca tttttatttc tggcggaaaa tgggcaatgc ctttatgaca
     5821 atcgatacag gtttcgccgc ccttttgtgc tttgttatgc attttctgcg cagattcact
     5881 ttgcgaggca atatccatgg catcaaaaga atggcaacta cggcacgttg cagagtcagt
     5941 tgcttttaat tctttccata ctgtttcggc catttcctgg cgatgagttt cgaacttatc
     6001 gtcactgtct attttgccgc taacaaattc atgataaata tctttagatg cttttaattt
     6061 agcaaataaa taatccatcc ctgactttgg aatatggcaa tcggcacatt ccgcacgtat
     6121 ccctttctgg ttcgaaaagt ggacagttcc ctgatattcc tcaaaaggtt tactcatcga
     6181 gtggcaggaa aggcaaaatg ctgtatccga cgttttatgt aaggcttttt gcgccagcaa
     6241 taacccgccg ccaccaacca caaccgctat cagcaaaaac aataacccaa tgcgtttttt
     6301 ccctcgcata gattcctcta attaaattcc agaacaccga aatcattgta taaataaata
     6361 cacaacgaat tgactacttg cttaattcgg ctcaacactg cctgaaataa tcgataaaga
     6421 atatgattta ttacaatgta atcattaatt actaaggaat aatccagttg ttatttagaa
     6481 tatatatttg tcagttttag caatttaaat cacataatta atgtgaatat ataaaatatt
     6541 tttagcacaa cgctatgtgc attgtcaccc gctcaacaga tcgcggtaat cgttcatttt
     6601 ttatactatt cagcgataaa aaaaggcccc tgttgaaatt gcaggggcct ggtacgagca
     6661 agcatcatat tgggcgacat gatgcaacgg taaaaatcat ttggcctgat ggcgttcaat
     6721 gattcctttc atttcagcaa ccgccgcccc gtctacaaca taacgcgaat actcgtccgc
     6781 gtgtgcatct gatgacatgg acaatccttg attacgataa cgcatcggtg aggcttgcca
     6841 cgctcccgcg gagctatgga cttccagcac tccggcatcg aggaagtggt gcaggttttc
     6901 tgcacggact cctgctccgg ccataatgat tggagcatca cgatgggcaa taagttccat
     6961 aatttttgat aaaccttgca gtgcgtctga tttttgccct gatgtcagta cccgggcaat
     7021 gcccaattcc gcaagattat tgagtgtatt taaacggtta gcgcacatat cgaaggcgcg
     7081 atgaaaagtc actgccagcg gaccggcagc agccattatt ttttccattc gtggcatatc
     7141 gacattcccg tcaacatcga gaacgcccgt caccagtcca ggaaaaccta attcgcggac
     7201 cgtgcgcaca tcctcaagaa tggcggcaaa ctcaccgtcg ctgtagcaaa aatcaccacc
     7261 gcgtgggcga attatcggat gcacagggat cgtcacccgc tggcgcacgg atttcagtac
     7321 acccaacgac ggcgttaagc ccccctcttt tggggctgcg cataattcaa ctctgtctgc
     7381 gccgttttgc tgcgccgtta gtgcacattc catgctgtaa cagcaaattt ccagtaatgc
     7441 catttttact ccttaattac gccgactgct cgctggcaac gatctcttca atggaccacg
     7501 gatgaaactt aatagttgtt ttgccatcgg tgaccgccag cgtcggattc ggtaatcgct
     7561 catgctcacc ttttggcgaa ctggttttaa ctgagatccc cggtaggctg agtccttcat
     7621 cagaaagcaa tgccagcgca cgggcattca gcgtttctgg atcacccggc aaaacgattt
     7681 caatatgttc ccaaccttcg tgtgggtaac gtttttcccc gggccacggt agctccacaa
     7741 tggaaaactg ccagtgcgca acctgtaccg gttcatgcaa tttaaacaga caaatcggtc
     7801 tgccattgat catattttct gacaaaagct cgccacactg ttcaaacccg cgacgccagc
     7861 gctcagcggt gacgttttga tggcaacgca aagaaatgtg atcggcagtc agcggagtga
     7921 tattcaaccc cagacggcgg gaaagttcat ctaatgcgtg ggtaaatcgc ggtaaatccg
     7981 atgcaatatc ctgcagctcg tcgatagatt gccagttcgc cataatcact cttcgtcttt
     8041 cagtaaaagc gttaatttac cctgttgccc tgtgccaacc aaccgctgat ttcacgccgc
     8101 ttctgatgca atagtgaaaa cggcaatacg ccacgcgcac gttgctgacg aaaacagcca
     8161 tttgcagtat actcccgccc taatttcttt aactggtgcg ggcaattttt gctcgcttca
     8221 tcaatgtaag gtattccggt gaatattcag gctcttctct cagaaaaagt ccgtcaggcc
     8281 atgattgcgg caggcgcgcc tgcggattgc gaaccgcagg ttcgtcagtc agcaaaagtt
     8341 cagttcggcg actatcaggc taacggcatg atggcagttg ctaaaaaact gggtatggca
     8401 ccgcgacaat tagcagagca ggtgctgact catctggatc ttaacggtat cgccagcaaa
     8461 gttgagatcg ccggtccagg cttcatcaac attttccttg atccggcatt cctggctgaa
     8521 catgttcagc aggcgctggc gtccgatcgt ctcggtgttg ctacgccaga aaaacagacc
     8581 attgtggttg actactctgc gccaaacgtg gcgaaagaga tgcacgtcgg tcacctgcgc
     8641 tctaccatta ttggtgatgc agcagtgcgt actctggagt tcctcggtca caaagtgatt
     8701 cgcgcaaacc acgtcggcga ctggggcact cagttcggta tgctgattgc atggctggaa
     8761 aagcagcagc aggaaaacgc cggtgaaatg gagctggctg accttgaagg tttctaccgc
     8821 gatgcgaaaa agcattacga cgaagatgaa gagtttgccg agcgtgcacg taactacgtg
     8881 gtaaaactgc aaagcggtga cgaatatttc cgcgagatgt ggcgcaaact ggtcgacatc
     8941 accatgacgc agaaccagat cacttacgat cgtctcaacg tgacgctgac ccgtgatgac
     9001 gtgatgggcg aaagcctcta caacccaatg ctgccaggaa ttgtggcgga tctcaaagcc
     9061 aaaggtctgg cagtagaaag cgaaggggcg accgtcgtat tccttgatga gtttaaaaac
     9121 aaggaaggcg aaccgatggg cgtgatcatt cagaagaaag atggcggcta tctctacacc
     9181 accactgata tcgcctgtgc gaaatatcgt tatgaaacac tgcatgccga tcgcgtgctg
     9241 tattacatcg actcccgtca gcatcaacac ctgatgcagg catgggcgat cgtccgtaaa
     9301 gcaggctatg taccggaatc cgtaccgctg gaacaccaca tgttcggcat gatgctgggt
     9361 aaagacggca aaccgttcaa aacccgcgcg ggtggtacag tgaaactggc cgatctgctg
     9421 gatgaagccc tggaacgtgc acgccgtctg gtggcagaaa agaacccgga tatgccagcc
     9481 gacgagctgg aaaaactggc taacgcggtt ggtattggtg cggtgaaata tgcggatctc
     9541 tccaaaaacc gcaccacgga ctacatcttc gactgggaca acatgctggc gtttgagggt
     9601 aataccgcgc catacatgca gtatgcatac acgcgtgtat tgtccgtgtt ccgtaaagca
     9661 gaaattgacg aagagcaact ggctgcagct ccggttatca tccgtgaaga tcgtgaagcg
     9721 caactggcag ctcgcctgct gcagtttgaa gaaaccctca ccgtggttgc ccgtgaaggc
     9781 acgccgcatg taatgtgtgc ttacctgtac gatctggccg gtctgttctc tggcttctac
     9841 gagcactgcc cgatcctcag cgcagaaaac gaagaagtgc gtaacagccg tctaaaactg
     9901 gcacaactga cggcgaagac gctgaagctg ggtctggata cgctgggtat tgagactgta
     9961 gagcgtatgt aatcgatttt tcgtgagagt gaagcctgat cagggttagc cgatcaggct
    10021 tttttattgc catctaaatg tattctgaaa acggacatgc catcgttttc tcactgttga
    10081 gtaagaggcc agaagcgtaa tatccagccc ctgggaaacg ataacggttc aatttaagga
    10141 ataccgcagt gtttaaattt cttgtattaa cattaggcat tatctcttgc caggcttacg
    10201 cagaagatac ggttatagta aatgatcatg acatttcagc catcaaagat tgttggcaaa
    10261 aaaattcaga tgatgatact gacattaacg tgatcaaatc atgtctgcga caagaataca
    10321 atctcgtcga tgcgcaatta aataaagctt atggtgaagc ttatcgttat atagaacaag
    10381 tgccacgcac aggtgcaaaa aaacctgata ctgaacaact taacttgctt aaaaaatcac
    10441 agcgagcctg gctggatttt agggacaaag aatgtgaatt aatcctttca aatgaggatg
    10501 ttcaggattt aagtgaccct tattctgaat cagaatggct atcatgtatg atcatacaga
    10561 ccaatacgcg aactcgccag ttgcagctat accgtaactc tgaagatttt tatccaagcc
    10621 ctttgacaag aggataattc acatcttttt ggcatgtttt gttgcaagct attcctgata
    10681 aataattgca acaaaacatc gagccttttt cgctgagtta ttaaacatgc tcgcgagcgc
    10741 gtaattttta tttgtccttc agcgataatt cacaatcact tcattccgtt gtacctttag
    10801 cggtggaatt aaccgcccac cgccaggcac ttcccagata aagcgcaacg gttctgctgc
    10861 cgctataccg gaaaaggcca cggtggttcc gctctgcccc tctaattcga cacaacgaga
    10921 ttgcgaacat aagcgaaccc gcagtcctgc aggtgtcggg ccgataagct gataacgcca
    10981 cgccaccagc gtcatcaatc ctgaagcagg ttgtcgcgta gaaagaggcg ctgacgacat
    11041 cgactcaccg cgatgattta gcgtaattcc gacactactt gcctgccaca tcccctcccc
    11101 ggcggc
//
LOCUS       DAJVTL010000134        11038 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.136, whole genome shotgun sequence.
ACCESSION   DAJVTL010000134 DAJVTL010000000
VERSION     DAJVTL010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11038
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.136"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(261..1013)
                     /locus_tag="OQQ26_003508"
     CDS             complement(261..1013)
                     /locus_tag="OQQ26_003508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein"
                     /protein_id="HCS1858847.1"
                     /translation="MNLEALPKYYSPKSPKLSDDAPATGSGGLTITDVMAAQGMVQSK
                     APLGFALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEETRLQIIPYLVNFAFAD
                     YSRSAASKARCEHCAGTGFHNVLREVVKHSRSGESVIKEEWVKELCQHCHGKGEVSTA
                     CRGCKGKGIVLDEKRTRLHGTPVYKICGRCNGNRFSRLPTTLARHHVQKLVPDLTDYQ
                     WYKGYADVIDKLVTKCWQEEAYAEIQLRNVTR"
     gene            complement(1027..2016)
                     /locus_tag="OQQ26_003509"
     CDS             complement(1027..2016)
                     /locus_tag="OQQ26_003509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001764249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HCS1858848.1"
                     /translation="MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSS
                     FASGAVPAASQPLADDPAVRAVFRNEAVIRRAGGVECLESWLLREKGCQWPHSDWHSE
                     NMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVV
                     TMPELCWWLIRNDLADALPESAARKALRLPKPVVPSVTRESDLVPSVPATSIIQDKAK
                     KVLALKVDPESPESFMLRPKRRRWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGG
                     MGTKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFIDRALAIGVLA"
     gene            complement(2024..2833)
                     /locus_tag="OQQ26_003510"
     CDS             complement(2024..2833)
                     /locus_tag="OQQ26_003510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001061418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HCS1858849.1"
                     /translation="MNNLMVIDGIEVRRDAYGRYSLNDLHRAAGGEQKNRPKYWLSNK
                     QTCELIEQLFTEGGIPPLEQNQPVSVINSGNNQGTYVCKELVYAYAMWISPSFHLKVI
                     RTFDMVTSAPEKLSGQAADKMQAGVILLDFMRRELNLSNSSVLGACQKLQEAVGLPNL
                     APRYAIDAPADAPDGSSRPTLSLSALLKQYGIRLTANQAYHQMAKLGIVEQRERYSRT
                     SINNIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESRFPELLKLLDTVH"
     gene            complement(2853..3242)
                     /locus_tag="OQQ26_003511"
     CDS             complement(2853..3242)
                     /locus_tag="OQQ26_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000767134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HCS1858850.1"
                     /translation="MKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACAAI
                     VEQLRRLPKPTSAPASVEIVLFPPDNRIRDLDNYNKALFDALTHAGVWEDDRQVKRML
                     VEWGPVIPKGKVEITISKYEKPAGAAA"
     gene            complement(3239..3565)
                     /locus_tag="OQQ26_003512"
     CDS             complement(3239..3565)
                     /locus_tag="OQQ26_003512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003878599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HCS1858851.1"
                     /translation="MTTLTQCQQQVLDMLISYQKERGFPPTNQEVATMLGYRSVNAAV
                     EHLRALEKKGVITIKRGVARGITLHTAVKDDDSEAVGIIRSLLAGEENARLRATHWLH
                     ERGLKV"
     gene            complement(3562..4215)
                     /locus_tag="OQQ26_003513"
     CDS             complement(3562..4215)
                     /locus_tag="OQQ26_003513"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001378271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage N-6-adenine-methyltransferase"
                     /protein_id="HCS1858852.1"
                     /translation="MSNKYCQELVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPF
                     VLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITG
                     MRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGFELPAWFIPKDE
                     KQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRLQAEKLVREMAA"
     gene            complement(4215..4709)
                     /locus_tag="OQQ26_003514"
     CDS             complement(4215..4709)
                     /locus_tag="OQQ26_003514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
                     /protein_id="HCS1858853.1"
                     /translation="MIMSLLNEVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLR
                     QSGRVAHRCEGDTRRHFPRQIKISPEAERQPVRETRPVRNFYVGTNDPREILCLTRQA
                     EELESRGLYRRAATVWMAAFRESHSQPERNNFLARREQCLRKSSKRAVSGDEWYLSGN
                     YVGA"
     gene            complement(4706..5458)
                     /locus_tag="OQQ26_003515"
     CDS             complement(4706..5458)
                     /locus_tag="OQQ26_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000061490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1858854.1"
                     /translation="MSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIA
                     DQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSAGDSP
                     RTSHSFEPVKEPVNEPIAVGASADESVRVRSNRPEYSPEFEQAWLAYPKRTGGNSKSA
                     AFKVWKARLNEGVNPETMLEGVKRYAGWVSAMGNSGTQFVKQAVTFFGPDRHFEESWE
                     VPAVSAARREDPYFKASYDNVDYSQIPAGFRG"
     gene            complement(5455..5691)
                     /locus_tag="OQQ26_003516"
     CDS             complement(5455..5691)
                     /locus_tag="OQQ26_003516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000933940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858855.1"
                     /translation="MLNPLLLNIYRLFQRKKISTPTVGQWYTTPAGHVLRVSLVDREC
                     QKVICEPLGRNYRVSMPLIAFRSGKNMKHLGGAA"
     gene            complement(5684..6520)
                     /locus_tag="OQQ26_003517"
     CDS             complement(5684..6520)
                     /locus_tag="OQQ26_003517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001376881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HCS1858856.1"
                     /translation="MNSLTANNRLSQQLVVSVAEHLLLRHECRLPNLLAVSNHRELYL
                     TVGGELCRNLTAGFVTEEDFMFMLFVGSQKHSALSIFAKTTRMSALVLCGNSSVILLS
                     VKDHQHIDSAIPGRYTVQAPYKAGAGIGVLELIKAIYDAPASFLSSAFAHIKVMVGWA
                     GASKDAPVSLITGYANPVQFTTSEIGVSGGGSISPIKEAAIMATVPALTRLNDEDLHK
                     LSYVTTALRALRKVTLSDPQAHQVLVETLLNLQAERIRLADKANFHIHRLLNISGGHR
                     HA"
     gene            complement(6517..7068)
                     /locus_tag="OQQ26_003518"
     CDS             complement(6517..7068)
                     /locus_tag="OQQ26_003518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858857.1"
                     /translation="MGKHHWKVEKQPEWYVKAVRKTIAALPGGYAEAAEWLDVTENAL
                     FNRLRADGDQIFPLGWAMILQRAAGTHYIADAVAQSAGGVFVSLPEIEEVENADINQR
                     LLEVIEQIGSYSKQIRSAIEDGVVEPHEQTAINDELYLSISKLQEHAALVYKIFCAPE
                     KSDARECAAPGVVAFCVCGETNA"
     gene            complement(7112..7312)
                     /locus_tag="OQQ26_003519"
     CDS             complement(7112..7312)
                     /locus_tag="OQQ26_003519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1858858.1"
                     /translation="MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKK
                     LEQCTSGAITKSDLRPDIYPKD"
     gene            7403..8077
                     /locus_tag="OQQ26_003520"
     CDS             7403..8077
                     /locus_tag="OQQ26_003520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HCS1858859.1"
                     /translation="MKTVHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGA
                     TKNIGDSMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGA
                     WKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHG
                     DDVIALMHDSGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSIIGTVIFSGKPR
                     RYTIKA"
     gene            8728..9108
                     /locus_tag="OQQ26_003521"
     CDS             8728..9108
                     /locus_tag="OQQ26_003521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001323604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858860.1"
                     /translation="MIRSRKMASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMN
                     TKTKGKVSLNLEIEPFDENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTI
                     LQEDQGQLLTLAGEPDGKLRAAGH"
     gene            9174..9998
                     /locus_tag="OQQ26_003522"
     CDS             9174..9998
                     /locus_tag="OQQ26_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2303 family protein"
                     /protein_id="HCS1858861.1"
                     /translation="MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHD
                     LEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEP
                     GHADNTATLKLKKTAPFSALLSINGERNSQKSLAEWIEDWADYLVGFDANGDAIQATK
                     AAAAVRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKER
                     PFKLRLSIITGDRPVLVLRIIQLEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA"
     gene            10126..10662
                     /gene="yfdR"
                     /locus_tag="OQQ26_003523"
     CDS             10126..10662
                     /gene="yfdR"
                     /locus_tag="OQQ26_003523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416862.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
                     /protein_id="HCS1858862.1"
                     /translation="MSFIKTFSGKHFYYDRINKDDIDINDIAVSLSNICRFAGHLSHF
                     YSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKQMEEKIDAVIR
                     EKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHA
                     YGMFMERFNELSELRKCA"
     gene            10653..11015
                     /locus_tag="OQQ26_003524"
     CDS             10653..11015
                     /locus_tag="OQQ26_003524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858863.1"
                     /translation="MRMNVFEMEGFLRGRCVPRDLKVNETDAEYLVRKFDALEAKCAA
                     QENKVIPVSTELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLE
                     NVNITHWAVMPKAPEAGA"
BASE COUNT         2806 a         2890 c         2561 g         2781 t
ORIGIN      
        1 actaatttat taaataatca tcgagtttct ggaatacaga cgttaaccat ctctccaaaa
       61 tctaaaagat aataagaaaa aatgtttaac gcaccaatcc atttcatagt ttcatgagac
      121 atctggcaca aaaaaacccg ctcagtggcg ggttcttaaa tcttatcaac ggtagacata
      181 caaagcccat cgttgggaaa atcttatcca tattttttga aaaatgcaag catcatgtcg
      241 tcatcttcgg cgaaaaccat ttatcttgtc acatttctca attgtatctc tgcatatgct
      301 tcttcctgcc agcactttgt aaccagttta tcaatgacat ctgcatatcc tttgtaccac
      361 tgataatccg tcaggtctgg taccagcttc tggacatgat gccgcgccag tgtggttggt
      421 aaacggctaa accggtttcc attgcaacgc ccacaaatct tataaacagg cgtgccatga
      481 agccgggtcc ttttttcatc caggacaata cctttaccct tacaccctct gcacgctgtg
      541 ctgacttctc ccttaccatg acaatgctga catagttcct tcacccactc ttccttgata
      601 acagattccc cgcttctgga gtgtttcacc acttcgcgca atacattatg aaatccagta
      661 ccagcacaat gctcacagcg agccttactt gccgcagacc tggaataatc agcaaaggca
      721 aaattcacaa ggtaagggat gatctgtaac cgggtttctt cactcaattt gttcaatgtc
      781 gggttatcca gtgccatcgc gtaattgagc agaccttcaa tcgcaaattg aggatcctga
      841 acaccaactt ttgccaggaa taaggcaaac ccaagcggtg ctttcgactg caccatcccc
      901 tgcgcagcca tcacatccgt aatcgttaaa ccacctgagc ctgtcgccgg tgcgtcatcg
      961 ctcaattttg gagattttgg ggagtaatat tttggtaagg cttcaaggtt catgctcgtt
     1021 ctccacttac gccaatacgc caattgccag cgcacgatcg ataaaacgaa atatcagctc
     1081 cagctgagag ccatacttct cttcaaatgc cacggtatcc gcatgcagct cgtcgtgatg
     1141 ctttctgcac aaaggcaaca caaagaggtc atgcgctttt gttcccattc caccctgacc
     1201 gtgacctatc aggtggtggg gatcatcagc gggctttcca caacatgcac acggctgtgt
     1261 cttaacccag cgcgtgtact tttcattaac ccagcggcga cgttttgggc gtaacataaa
     1321 agactccggc gactccggat ccactttcag cgccagcacc tttttcgctt tatcctggat
     1381 gatgctggtg gcaggaaccg aaggcacaag gtcactttcc cgggtgacag acggcacaac
     1441 aggctttggt aatctcagtg ccttacgggc tgcactttcc ggtaaggcat ccgccaggtc
     1501 attacgaatc agccaccagc acagttccgg cattgtcaca acgtgactgt catcaaaacc
     1561 gagatcccga cgcacaacag acaacaccca gcgggcacag ttatccgttg ccattgattc
     1621 cagccgttcc gtgaactgat cgcgcagctg gttatcacag tgccagcaca gacggattgc
     1681 gcccggcgcg tgtcgcattg tggtcatgtt ctcgctgtgc cagtcggaat gaggccactg
     1741 gcagcctttt tcacgaagta accagctttc aagacattcc acgccaccag cacgacggat
     1801 cactgcctca ttgcggaaca cagcccgaac ggcaggatca tccgccagcg gttgtgatgc
     1861 cgccggaacg gcaccactgg cgaaagatga ataacgttcc ggctcaggct ccagcaggac
     1921 acgcccctgc ataaacaggg gcatcagctc tgaacctggc ctgaacaata cgatccccat
     1981 acgcggggca atttcagggg tcagtagtgc tctcacggtc acctcaatga acggtatcga
     2041 gcagctttaa cagctcaggg aatcgggatt cgaagaaatg cggctgcgtc tcgcgcggat
     2101 ttgcgggact ggtgatgttc ttgccgaaca tgcagccttt cgctgtcagc gaccagaatt
     2161 ttttgatgtt gttaatcgag gtacggctgt atcgttcgcg ttgttcaacg atccccagct
     2221 tcgccatctg gtgatatgcc tgattagccg taaggcggat accatactgt ttcagcagtg
     2281 cactcagcga cagcgtaggg cgacttgagc catcaggcgc gtcagcagga gcatcaatgg
     2341 catagcgcgg tgccagattc ggtaagccaa cagcctcctg gagtttctga caggcaccaa
     2401 gcactgaaga gttagacagg tttaactccc tgcgcataaa gtccagcaga atcactccag
     2461 cctgcatctt gtcagcagcc tgcccggata atttttccgg tgcgctggtt accatatcga
     2521 aagtacggat caccttcaga tggaatgacg ggctgatcca cattgcatag gcatacacca
     2581 gttctttgca gacatacgtc ccctggttat ttccgctatt aatgacgcta actggttgat
     2641 tttgttccag aggcggaatt ccaccctcgg tgaaaagttg ttcaatcaat tcacaggttt
     2701 gcttattgga gagccagtat ttcgggcggt ttttttgttc tcccccggct gccctgtgca
     2761 gatcgttcag gctgtaacgc ccataagcat cacgacgaac ttcaatacca tcaataacca
     2821 tcagattatt catacttcgt ttctcctctt aatcaggcgg ctgcacccgc cggtttctca
     2881 tacttactga tagtgatctc gaccttccct ttcgggataa ccggtcccca ctccaccagc
     2941 attcttttca cctgtctgtc gtcttcccac acacccgcgt gggtcagggc gtcaaacagc
     3001 gccttgttat agttgtccag atcgcggatc cggttatccg gaggaaacaa cacgatctcc
     3061 actgaagcag gtgccgacgt tggttttggc agacgacgta actgctcaac tattgctgcg
     3121 cacgccgcgc tctgaaattt tcgccccgcc gcgcttatca ggctcttacc agcaaatgcc
     3181 cctttgttgg ggtgtcgcca gtaggtgttc acgctgggcg ggaaaggcag gatcagcttc
     3241 atactttcag gcctctctca tgtaaccagt gagttgcacg cagccttgcg ttttcctcac
     3301 cggcaagcag tgagcggata atcccgaccg cctcgctgtc gtcgtccttc accgcggtat
     3361 gaagcgtgat cccccgggcc acaccacgct ttatcgtgat gacgcctttt ttctccagtg
     3421 cgcgaagatg ctccaccgct gcattcaccg aacggtatcc cagcatggtt gccacctcct
     3481 gattggttgg cgggaagcca cgctctttct gataagaaat cagcatatcc agcacctgct
     3541 gctggcattg agttaacgtc gtcatgccgc catctccctg accagctttt ccgcctgcag
     3601 gcgaacctgc gccagaaacg cctcaccaca tgcctcaagt tcatcgcgcc cgatatagct
     3661 gattgccggt cccttccagg tcttgtcgaa aacagcaata gcaccagcga agaaagcgcc
     3721 tgtcggcacc tgcttctcat ccttcgggat aaaccaggca ggcagttcaa aaccaatacg
     3781 cccgcgaata aaagcaatat gatctgcatc ttccggccac cacacttcgc tggtggcagc
     3841 tttgatcagg aaaacatagc gcccgccctt atcacgcatg gcactggcat gcttcatgat
     3901 gtaacgcatg ccggtgatgt attgcccctc atgctgactg gcgcggctgt atgggggatt
     3961 tccaaaggca gcacctttaa gctccgcaag gcgttctgac cagtcatgcg ccagcgcgtt
     4021 gtcttccgcc gtgtaatacg cagcgcattt ggcgttatca ccgtcagtga acagatccag
     4081 aacaaacgga ccaaacaggg tgttaattcc ccagaaaatg ttgtccggcg tgcgccactg
     4141 atcgcccact tccttcagtt catgggctgg tttgttccgc agttccacca gctcctggca
     4201 atatttatta ctcattaagc ccccacgtaa ttccctgaca gataccactc atcacccgat
     4261 acagcgcgct tgctgctttt ccgtaaacac tgctcacgac gcgccagaaa attgtttcgt
     4321 tctggctggg agtggctttc acggaatgcc gccatccaca ccgttgcagc acgacggtat
     4381 aagcccctgg actccagttc ttcagcctgg cgggtcaggc ataaaatctc ccgcgggtcg
     4441 ttagtgccga catagaaatt gcgcacaggt ctggtttcac gaactggttg ccgttccgcc
     4501 tccggcgata tctttatctg gcgcggaaaa tgtctgcgtg tatccccttc acaacggtga
     4561 gccacacgcc cactctgacg taacttgctt gctgactgca gaacgcgctg ccgtgagtaa
     4621 cctgcaaaag catccgcaat gtctccggaa gtacaccccg gatgggcttc aatgaatttc
     4681 tgaacttcat tcaaaagact catgatcacc ccctgaatcc tgccgggatc tggctgtagt
     4741 ccacgttgtc gtaactggct ttgaagtacg ggtcctcacg tctggctgca gataccgcag
     4801 gaacttccca ggattcttcg aaatgacgat ccggaccaaa gaacgtgaca gcctgtttca
     4861 caaattgtgt gccgctgtta cccatcgcag atacccagcc cgcatagcgt ttcacacctt
     4921 ccagcatggt ttcggggttt accccctcat tcaaacgggc tttccagact ttgaaggctg
     4981 cagattttga attgccacca gtacgtttgg gatatgccag ccatgcctgc tcaaactccg
     5041 gagagtattc cggtcggttt gaacgaactc gcacagactc atcagcagat gcaccaacag
     5101 ctattggttc attgactggt tctttgactg gttcaaaaga gtgactggtt ctgggtgaat
     5161 ctcctgcact accccctagt gaatctcctg caccatccag atgaaggaga tagatattac
     5221 ttgagttacc tttttcacct ttccgggtga ctttttttac cagcccggac tcacaaaggg
     5281 ccgcaatatg attcatcaca gaacgtttgc taatctcgca ctggtcagca atatgctggt
     5341 agctgggcca gcactcaccc tgatcgctgg cattatcagc cagcttgatc agaaccagtt
     5401 ttcgcaatgg attacccact cgaattttca tcgctttaac catcagctcc atactcatgc
     5461 tgcacctccg agatgcttca tgttttttcc ggagcgaaag gctataagcg gcatactgac
     5521 gcggtaatta cggcccagcg gttcacaaat caccttctga cattcacggt caaccaggct
     5581 gacacgtaga acatgccctg ctggcgtggt gtaccactgc ccaactgtgg gtgttgatat
     5641 ttttttacgc tgaaataaac ggtaaatgtt gaggagcaac ggattaagca tgacgatgcc
     5701 ctccgctgat attcaggaga cggtgaatat gaaaattagc cttatccgcc agacgaatac
     5761 gttcagcttg caagttaaga agggtttcta ccagaacctg atgtgcctgc ggatccgaaa
     5821 gagttacctt gcgcagagca cgtagtgcag ttgttacata actgagttta tgtaagtctt
     5881 catcattcag acgagtgagg gctgggacag tagccatgat ggcagcctcc ttgatcggtg
     5941 aaatacttcc accaccggaa acgccaattt cgctggtggt gaactgaacg gggttggcgt
     6001 aaccggtgat caaggaaacc ggcgcatctt tcgatgcccc cgcccagccc accataactt
     6061 tgatgtgagc aaatgcggac gataaaaaag acgctggcgc gtcatatatc gccttgatca
     6121 attccaggac gccaatcccg gcacccgctt tataaggtgc ctgaacagtg taacgtcccg
     6181 gaatggcaga atcaatgtgc tggtggtcct tcacactcaa caaaatcacg cttgaatttc
     6241 cacaaaggac taaagcactc atgcgggtag tctttgcgaa gatagataac gcgctgtgtt
     6301 tctggctccc aacgaataac atgaacataa agtcctcttc cgtcacgaaa ccagcggtta
     6361 agttcctgca caactcgccc cccacagtca ggtaaagttc tctgtggtta cttacagcca
     6421 ggagatttgg taatctgcat tcatgccgta acaacaggtg ttcagcgacg ctgaccacca
     6481 gctgttgcga caaacggtta tttgccgtta aactgttcat gcgttagttt ctccacagac
     6541 acaaaacgcc acgacgcccg gagctgcaca ctcgcgggcg tcactctttt ctggagcgca
     6601 aaagattttg tagaccagtg ctgcatgctc ctggagcttc gaaattgaca gatacaactc
     6661 atcattaatt gctgtctgct cgtgtggctc cactacccca tcttcgattg ccgaacgaat
     6721 ctgctttgag taactcccga tctgttcgat gacttccagc aggcgctggt ttatatcggc
     6781 gttctctact tcctcaattt caggaagcga tacaaacacc ccaccagcag actgtgcgac
     6841 agcatccgca atgtagtgag tgccagccgc gcgctgtaaa atcattgccc atcccagcgg
     6901 gaaaatctga tcgccatctg cacgaaggcg gttgaataaa gcgttctctg ttacatctag
     6961 ccactcagca gcttcagcgt acccccccgg caacgccgcg atagtttttc tgacagcttt
     7021 cacgtaccac tcaggctgtt tttctacttt ccagtgatgc ttacccacgg ttagcctcat
     7081 cgttctgtgg ttaaaaattg aaggtgttct gttaatcttt cggatagata tccggtctta
     7141 agtcagattt cgtaattgca cctgacgtgc attgctcaag ttttttagcc agcacaaaac
     7201 tggctttttt ataaccattg aaaaccagcc gtaaatagcc tggtgttgag ccaacttttc
     7261 cggccaactc gccctgctgt tctttggtta aagagtccca atacgctttc atacaatatg
     7321 tacctccgat atacatatta catgattgag atgaaccttc aagatacttg taccctatcg
     7381 gtacaaaggt tttaatttcg ttatgaaaac agtccatgac atccggcggt ctaacgccag
     7441 aaaactgaga gatggtgttg gcgggaattc ttcctttgcc accatgattg atcgcgagcc
     7501 aacccagacc agcaggttta tgggagatgg tgctactaaa aatatcggtg acagcatggc
     7561 acggcacatc gaaaaatgtt tcgacctgcc tgtcggatgg cttgatcaag aacaccagac
     7621 aacaaacatc acaaaaaaac ctgatgtttc aattactaac aaacaaataa cgttagtccc
     7681 tgtcatatca tgggtacagg ccggagcatg gaaagaagtt ggctattctg aggttgattt
     7741 gagcacagca gaaacttatc cctgccctgt accctgtggc gaaatgactt atatcttgcg
     7801 ggtgattggt gattcaatga ttgatgagta ccgcccggga gacatgattt ttgtagatcc
     7861 tgaagtccct gcctgccacg gtgacgacgt tattgcattg atgcacgatt caggcgaaac
     7921 caccttcaag cggttgatag aagatggaac acagcgttat ctcaaagcat taaacccaaa
     7981 ctggcctgag ccttacatta agattaacgg taattgctct ataattggta cagtgatttt
     8041 ctcgggaaaa ccaagaagat acacaataaa ggcctaatca atatttatga acctgcttcg
     8101 gcaggttttt ttatgcttga caatgtaccc atgagataca taatgtatct aaaagaaaca
     8161 taacacaggc aagattaaaa caaaatttgg ttgtaacacg gcgtatggca catgcgtcgt
     8221 tagcggtctg gtgacgttaa aggggacaat ccactccttg ctcgagcaaa caaaccaggt
     8281 agccggaatg tgcaagtcaa tgatgatgct gataagacgc ctaaccagcg tggcgattcg
     8341 gtttgacgcc tgggaagaga ccagggtgca acgatgaggg catttatgga accgcgacaa
     8401 agtgtggtgc cgtaactggc taagtgctct cagcgttgtg gtaatccgcg aaatggcgcg
     8461 gcggtaagta tggcggggtt actctttccc cgttgaggac accggattgt caggttgacc
     8521 atacgcctga gtgacaaccc caccacaaca gccactgctt tggcggtacc agtttgtaca
     8581 cttgcttccg gctggtaccg ctctttttac aaaacagaga agagcatcac cggacgacgg
     8641 gctcataacc caatccatcc gggcggctgc caccgcaggt gttcttctct gttttgtgga
     8701 gaaaccaacc gaccttgcag ggtcgatatg attaggagca gaaaaatggc tagcgaacgc
     8761 agtactgatg tgcaggcatt tattggggag ctggacggcg gcgtatttga aaccaaaatc
     8821 ggcgcagttc tcagtgaagt cgcttccggt gtgatgaaca cgaaaaccaa aggtaaggtc
     8881 tcactcaacc tggaaatcga accatttgat gagaaccgtg tgaaaatcaa acacaaactc
     8941 tcatatgttc gcccgactaa ccgcgggaaa atttccgaag aagacaccac cgaaacgccg
     9001 atgtatgtca atcgcggtgg tcgcctgact attctgcagg aagatcaggg acaattactg
     9061 actcttgccg gtgaacctga cggaaaactc cgcgcagcag gtcattaata tcgttcttaa
     9121 ttaaccgatt atttatctca tcactgaata tctttatata gtgaggactt attatgtctc
     9181 agaacttaga cgcaaccgca attaatcaaa tccatgccct tatttctgct cagggtgtta
     9241 atgaaattat cagtaagatt ggtgccgatg ctgtggcatt gcctgagaat ttccgcattc
     9301 atgatctgga aaaatttaat ttaaatcgct tccgtttccg tggtgcgctt tccactgcca
     9361 gcatcgatga ctttacccgt tattctaaag atcttgcaga tgaaggcacc cgctgcttta
     9421 tcgatgccga taatatgcga gccgtcagtg tgcttaacct gggtactatt gatgaaccag
     9481 gtcacgcaga taacaccgcc acactcaaac tgaaaaagac agcaccgttc tctgctctgt
     9541 tgtctattaa cggcgagcgt aactcccaga agtcactagc agaatggatt gaagactggg
     9601 cagactatct tgtgggcttt gatgctaatg gtgacgctat tcaggcaaca aaagcggctg
     9661 cggctgtccg taaaatcacg attgaagcaa accagaccgc tgattttgaa gataatgact
     9721 tcagcggcaa acgctccctg atggagtctg tcgaagcgaa gaccaaagac attatgccag
     9781 tggcatttga atttaaatgc gttccgtttg aaggtctgaa agaacgtccg tttaaattac
     9841 gcctcagtat tatcactggc gatcgtcctg tactggttct gcgcattatt cagctggagg
     9901 cggtgcagga agaaatggct aacgaatttc gtgatctgct tgttgagaaa ttcaaggaca
     9961 gcaaagtaga aacctttatt ggtactttca ccgcctgatt tcattactgc aaatgcccct
    10021 gcgggggcat ttatggaaac gtaatttact caataatcgc cggatggtga gggattcttt
    10081 ttaccagaat tcagcgcggt gcagcgcata tacgtggaga acaaaatgtc atttattaaa
    10141 actttttccg ggaagcattt ttattatgac aggataaata aagacgacat cgatattaac
    10201 gatatcgcgg tttccctttc aaatatctgt cgctttgccg gtcatctttc gcacttctac
    10261 agcgtcgccc aacatgcggt tctttgcagc cagctggtgc cgcaggaatt tgcttttgaa
    10321 gcgttaatgc atgatgcaac agaagcgtat tgccaggaca ttcccgcacc actgaaacgc
    10381 cttcttcctg actataaaca aatggaagaa aaaatagacg ccgtaatccg tgagaaatac
    10441 gggttacccc cagttatgag tacgcccgtg aaatatgccg atctcatcat gctggcaacc
    10501 gaacgccgcg atctcgggct tgatgatggc tctttctggc ctgtactgga aggtatcccg
    10561 gcaacagaga tgttcaacgt gattccactg gcaccgggcc atgcctacgg gatgtttatg
    10621 gaacgcttta acgagttatc ggagttacgc aaatgcgcat gaatgttttc gaaatggaag
    10681 ggtttcttcg tgggagatgt gtaccgcgag atctgaaagt aaatgaaaca gatgctgaat
    10741 acctggtgcg taaattcgat gcgcttgaag ctaaatgtgc agcacaggaa aacaaagtaa
    10801 taccagtgtc aactgaactg ccaccagcaa atgaaagtgt tttgttattc gatgctaacg
    10861 gagaaggctg gctaattggc tggcgttctc tctggtacac ctggggacaa aaagaaaccg
    10921 gagaatggca gtggacattt caggtcgggg accttgaaaa cgtcaatatc actcactggg
    10981 cagtaatgcc aaaagcaccg gaggctggag cataatgacc actttcaccg ataaggaa
//
LOCUS       DAJVTL010000135        10915 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.137, whole genome shotgun sequence.
ACCESSION   DAJVTL010000135 DAJVTL010000000
VERSION     DAJVTL010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10915)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10915)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10915
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.137"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..454)
                     /locus_tag="OQQ26_003525"
     CDS             complement(<1..454)
                     /locus_tag="OQQ26_003525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HCS1858864.1"
                     /translation="MNITPFPTLSTATIDAINVIGQWLAQDDFSGEVPYQADCVILAG
                     NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTVRTTGRAEATIL
                     ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQ"
     gene            complement(726..4628)
                     /gene="hrpA"
                     /locus_tag="OQQ26_003526"
     CDS             complement(726..4628)
                     /gene="hrpA"
                     /locus_tag="OQQ26_003526"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HCS1858865.1"
                     /translation="MTEQQKLTFTALQQRLDSLMLRDRQRFLRRLHGVKKVKNPDAQQ
                     AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDIREAIRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF
                     SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLL
                     RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRSGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR
                     IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF
                     YDQRISHEVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT
                     FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELN
                     DTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG"
     gene            4829..5434
                     /gene="azoR"
                     /locus_tag="OQQ26_003527"
     CDS             4829..5434
                     /gene="azoR"
                     /locus_tag="OQQ26_003527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HCS1858866.1"
                     /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA
                     ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
                     TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
                     LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
     gene            complement(5485..6801)
                     /locus_tag="OQQ26_003528"
     CDS             complement(5485..6801)
                     /locus_tag="OQQ26_003528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310040.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HCS1858867.1"
                     /translation="MITERRNVLLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDI
                     PSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSSTFEQRRLVHRLILATVMACCG
                     FFLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAVR
                     WRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIK
                     IALPYVVGACSCIVLMELMIMLQLWWSVWLCWPVLSLFIIGRGYGGLGAITTGKDSQG
                     KLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTF
                     EFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSA
                     LVVAAWLLCYGHCKTVNEAISYIRARRPQIVLTDEHKAMLKLWENR"
     gene            complement(6791..8269)
                     /locus_tag="OQQ26_003529"
                     /pseudo
     CDS             complement(6791..8269)
                     /locus_tag="OQQ26_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707668.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase family
                     protein"
     gene            complement(8261..8455)
                     /locus_tag="OQQ26_003530"
                     /pseudo
     CDS             complement(8261..8455)
                     /locus_tag="OQQ26_003530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310037.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
     gene            complement(8626..10884)
                     /locus_tag="OQQ26_003531"
     CDS             complement(8626..10884)
                     /locus_tag="OQQ26_003531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing bactofilin"
                     /protein_id="HCS1858868.1"
                     /translation="MLSLPVQAELRCVANTVDIEPFFSAATAEDKQQVEQAINSSVNL
                     VPFGLSASDWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNISTFSISNPWVILGNVTA
                     TNIITDSPLLITGSINASGLVFIDSYYDNPSTIKGSINARGIFINDIIAPVVVSSTNS
                     EFMVRASDKNDTENVKKALMIINPDVYHWGLINDEDALKEIFKRSNIRIAGNVCNQMK
                     KEALFRPKPSPELVQELQMLDEGNVAAFEGRDIATFDLAIMRTLPRLKGISANLRKQL
                     INSNDEQTIESMARYMPDNEILELTDQQLGYQPVVLGLLDREPLSVEIMTRMSRLPDG
                     VGPLNLALRENLPLDIVMTLAKRDWDMIIQELYKDAWLLPESIIDGYIRSDDSSIRQV
                     GAGGQLTYNQGMQLANDSSNNVVTSLAFKLAEMKPHGQLLRMTPQESDKVAVYLYQKF
                     ENDDDLIRVLFLALPDNLQFNFVKRMEKKSPAYFCCRDMQIIHSDAALQRLLTRFNDP
                     EGWSNLAKNQYLSTSMKQKIWQRALSHRKNNPKADSAAYETSADMILSELISYGEVDD
                     QMLLNATSLIRSEDWDFLESALISWDNLPAVVLKELQQNTPRNDIWAKFFLRQENSSR
                     AQVDEALRVYYALDPGALAQLDVLAKQPDRIWWSTLAKSNLTFFKFGALNNRHTPPAV
                     LAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELINPELDLVRQLALNGKTRAI
                     REQAMRKLDELY"
BASE COUNT         2778 a         2875 c         2518 g         2744 t
ORIGIN      
        1 cctgtacaac gatagccgta tgaactcgtt ctacggcctg attcaatagc gcgatgctaa
       61 agcgtgcgtt ttcaccgcag tttgttgact ggtcttcaat ccagattttt tcatgcggaa
      121 tatgccagaa ctgatgagcg atatccgcca ggatggtcgc ttctgctctg ccagtggtgc
      181 ggacagtgtt gtagtgcgga tgctgtgcga tggcgctata caaaaaagtg gtcgagtgac
      241 cgataccacc actaatcagt aaaggaattt gctgatcgcg agcaatctta catgccgcat
      301 cgatagtcgg cataaccgca tttcctgcaa gtatgacgca atcagcctga tacggcacct
      361 caccggagaa atcatcctgc gccagccact gtccgataac atttatggca tctatagttg
      421 ccgtcgaaag cgtcggaaac ggggtaatgt tcatggttcc tccttatcgt tcccttaaga
      481 atactgcgtg agataatagt gagaagcgga gcactctgaa aggaggaagt cgtatttcct
      541 taaccgccac tccgcaagcc tgacatatct tttaaggaaa tgctgtagat aaacattatt
      601 catcttgcag ctgagaattg tatttttctg aattcctgaa tttttgtcct taccgtttta
      661 gaattaataa aaaacccggc gctaaatgct taccgggttt tagatttatt aggcaaatag
      721 cagggttaac cgctaatctg ctccatcgcc tgcaaaatac gcttatctga aatcggataa
      781 ggcgtaccaa gttgttgagc gaagtaacta acgcgcagct cttctatcat ccaacggatc
      841 tctttcacgt cttcatcctc acgacgtgca ggcggcagtt tgttgatcca ttgctgccac
      901 gcctgctgga cgttttcgac tttcagcatc tgtgcacgat cgcgatgtgg atcaaccgcc
      961 agtttttcca gtcgtttttc aatcgcctgc aaatatcgca gcgtgtcgcc cagccgtttg
     1021 aagccgttac cagtgacaaa accgcgatat actaacccgc ccatctgcgc tttaatgtca
     1081 gaaagcccca gtgccatggt catatccacc cgccctttca gacgtttgtt gatattgaac
     1141 accgcagtga ggatttgctc gacctgcttc gcaatatcca ccaccgtgtc attcagttcg
     1201 gcgcgcactt tttcatgcag cgcagcaaag ccttcttccg tccagaccgg gccaccattg
     1261 gcgtcgatca gttgatccac accgcaggag atacagtcgt cgatcagctc cagcactttg
     1321 ccatacgggt taaagtacag ccccagcttg gctttgtttg gtaacttctc atgtaaatac
     1381 ttgatcggcg agggaatatt cagcagcagt agacggcgaa gaccgttcca cattgcctgt
     1441 ttttgctcca gcgggttatc aaacagtttg atcgccacac tgtcgcgctc atccaccagc
     1501 gccggccacg ccttcacttt gtagttgcca cgcttctgtt cgtagctttc cggcagctga
     1561 ccaaaactcc agatatgtaa gccgctctgc tcgataccgt catccgccac cgcagacagc
     1621 gtttcctgca ctttgccttt cagcgcatct ttcagatctt gtagcgagcg cccttctttt
     1681 agcttcttgt ttttgtcatc caccacgcgg aaggtgattt tcaggtgatc gggcacctga
     1741 tcccagtgcc agtcttcgcg gtcaacagta acgccggtca tccgccgtaa ctcgcgctca
     1801 aggctgtcaa gcaacggtaa ctccagcggt gtgacgcggc ctaaaaacgc ttcggcgtag
     1861 tttggcgcgg gtacaaaatt acggcgtacc ggtttcggca acgatttaat cagagcaatc
     1921 accagttcgc ggcgcagacc ggggatctgc cattcaaacc cgctttcctc aacttggtta
     1981 agtaacggca gcggaatatg tacggtcaca ccgtcagcat ccgcgccggg ctcaaactga
     2041 tagctcaaac gcagcttgag attgccctga tgccagaaat tcgggtaatc cagcttgctg
     2101 attttttccg ccccttcttt gatcaacatg ctcttttcaa agttgagcaa atcaggcgtt
     2161 tcgcggctga cttttttcca ccagctgtcg aagtgacgag cggagattac ctcgtggctg
     2221 atgcgctggt cgtagaactc aaacagcgtt tcgtcatcaa ccagaatatc gcggcgacgt
     2281 gatttgtgtt ccagctcttc tacttccgcc cgcagtttca ggttttcacg gaagaatgca
     2341 tgacgcgtct gccagtcacc ttccaccagc gcgtggcgaa taaagagttc acgacataac
     2401 gccggatcga tctggctgta gttgaccttg cgcgcggcaa caatcggcaa accataaaca
     2461 gtgacttttt ccgttgccat caccgcgccc tgcgcccgtt cccagtgcgg ttcgctgtag
     2521 gtacgtttaa tcaaatgctg agcgacaggc tccacccatt ccgggtcgat acgcgcagca
     2581 atgcgccccc acaggcggct ggtttctacc agttccgcca ccattaccca tttcggcggt
     2641 tttttgaata aaccagaacc ggggaagatg gagaaacgcg cgttacgtgc gccggtatat
     2701 tcttgtttat cggcatcttt catgccgata tgggaaagca accccgtcag taaggcgatg
     2761 tgaatttcgc gatattccgc cggttcgctg ttcaccggaa tgccgagttc tttcaccacc
     2821 tggcgcaact gggtgtagat atcctgccat tcgcgcacgc gcagatagtt gagataatcg
     2881 gtacgacaca ggcgacggaa ggcgttggaa gaaagcgcct tttgctgctc gccaagataa
     2941 ttccacagat tcacaaacgc gaggaagtca gactctttgt cgtggaagcg acgatgtttt
     3001 tcgtccgatg cctgctgttt gtccatcgga cgttcgcgcg gatcctgaat ggagagcgcg
     3061 gacgtgataa tcatcgcctc acgcacgcag ccatgttttt gcgcttccag caccatacgc
     3121 gccagacgtg ggtcgacagg caactgcgag agttggcgac cgagcggtgt cagtttatag
     3181 gcgctggcct gttcatccgt ggtgatcgct cccagttctt cgagcagacg cacgccatcc
     3241 tggatattgc gtttatccgg tgcttcgaca aacgggaacg cagcgatatc gcccagcccc
     3301 agcgcggtca tctgcaaaat aaccgaggcc aggttggtac gcagaatctc cggatcggta
     3361 aactccgggc gcgagaggaa atcgtcttcg gaatagagac gaatacagat cccttcggac
     3421 acacgaccac tgcggccttt acgctgattg gcagacgcct gggaaatcgg ctcaatcggc
     3481 aaacgctgca ctttggtgcg atagctgtag cggctgatac gcgctgtacc ggggtcgata
     3541 acgtatttaa tccccggtac ggtcagcgac gtttccgcga cgttggtcgc cagcacaatg
     3601 cgccgtccgc tgtgcgactg gaatacccta ttttgttcgc tgttcgaaag ccgcgcataa
     3661 agcggcaaga tttcggtatg gcgtaagttc agcttgttca gcgcatcggc ggtatcgcga
     3721 atttcccgct caccactcat aaagatcaga atgtcgccag ggctttcctg actcagttcg
     3781 tctacggcgt caaaaatcgc ctgcaactga tcgcgctcgg tgtcgtcggc ttcttcaaca
     3841 atcggtcgat agcgcacttc caccggatag gtccgaccgg agacttcgat aatcggcgca
     3901 ttattaaagt ggcgcgaaaa gcgttccggg tcgatagtcg cggaagtgat aatgattttt
     3961 aggtcaggac gccgcagcag caactctttc aaatagccga gcagaaaatc gatattcagg
     4021 ctgcgttcat gtgcttcgtc aataatgatg gtgtcgtact gcatcagcag gcggtcttgc
     4081 tggatttccg ccagcaggat accgtcggtc atcagcttga ccatcgtatt gtcgctgacg
     4141 tgatcgctga aacggacctt ataaccgatg caaccgcccg gctccgtttt cagctcttcc
     4201 gcaatacggt tcgctaccgt tcttgccgcc aggcgacgcg gctgggtatg gccgatcagc
     4261 cctttaatcc cgcgccccag ctccatacag attttcggta actgagtcgt tttaccagaa
     4321 cccgtttccc cggcgacgat caccacctgg tgatcacgaa tcgcttcgcg aatgtcctgt
     4381 tttttctgac taaccggtaa attgtccgga taagtgattt ccggtcgtgc cgcttcacgc
     4441 agcaggactt tccctgccgc ctggtcaatc tctttcgcca tctcctggaa aatggcctgt
     4501 tgtgcatcag gatttttaac cttcttcacg ccgtgcagac ggcgtaaaaa acgctgtctg
     4561 tcgcgcagca tcagcgaatc cagccgctgc tgcaaggcag taaaggtcaa tttttgttgt
     4621 tctgtcataa cgttagtggg cagtagtctg cctgattaat tttcttttaa atgatagata
     4681 tagagtacca catcgcggct ttctatgcgt tgttcaataa attcgaacat aggcttcgat
     4741 ttattgcgct atctctgtgg caggattgtg aataaagtgt cagcaagcaa cggggcatcg
     4801 cccattcaaa catctataag gaaacaccat gagcaaggta ttagttctta aatccagcat
     4861 tctggcaggg tactctcagt ctaatcagtt gtccgattat tttgttgaac aatggcgcga
     4921 aaagcactcc gctgatgaaa tcaccgttcg cgacctggct gcaaatccga ttccggtgct
     4981 ggatggcgaa ctggttggcg cactgcgtcc gagcgatgcg ccgctgactc cgcgtcagca
     5041 ggaagctctg gcgctttctg atgagctgat tgcggaactg aaagcccacg acgttatcgt
     5101 tattgcggca ccgatgtata acttcaacat atcgactcag ttgaaaaact attttgacct
     5161 ggttgcacgc gcaggcgtta ctttccgcta taccgagaat ggtccggaag gtctggtaac
     5221 gggtaaaaaa gccatcgtta ttaccagccg cggcgggatc cacaaagatg gaccaacgga
     5281 cctggtgacg ccgtatctgt ccacgttcct gggctttatc ggcattaccg atgtgaaatt
     5341 cgtcttcgcc gaagggatcg catacggtcc ggaaatggca gcgaaagcgc agtctgacgc
     5401 gaaagcagcc atcgatagca ttgttgctgc ataaccggac acgatcttga tgtggactgt
     5461 agttcagtcc acatcccaat ccacttatct gttttcccat aatttcagca tcgctttgtg
     5521 ctcgtctgtc agcacaatct gcgggcgtct ggctcgaata tagctaatcg cttcattaac
     5581 ggttttacag tgtccgtaac ataacaacca tgccgccact accagcgcac tgcgcgataa
     5641 tcccaacgcg caatggacca gaacgctgcc ttgctcttcg cgtaatgttt ccagcatcgc
     5701 cacggcctgt cggagctccc cctcttccgg aaccaccaga tccagcatcg gtacacaaaa
     5761 atagagtcga tcttttgtcg ctcgtccgcg aggaaattca aaggtgacgt ccagaaccgc
     5821 attctgtgcc ggaatatgtc gtggaaacgc ccctaaataa acaccagcag taattttgct
     5881 caccggctcc aggcgacgac aaaaccaacg catagacagc cacatcccga tgcgccaggg
     5941 caatgtcagc cagtaaacgg cgggcgggag tttcccctga ctatctttcc ctgttgttat
     6001 cgcgccaagc ccaccgtacc cacggccaat gatgaatagc gataatactg gccaacataa
     6061 ccagactgac caccataact gaagcattat cattagctcc atcaacacaa tgcacgagca
     6121 cgcgcctacg acatatggca gtgctatttt gattcgacgt tgatcaggtt tctgataatt
     6181 ccaacgacgg tcgacgggca ccatccagtc aattaacata cctaccgcca gccccgtgat
     6241 gacatcaata aaatgatgct gccaggtcgt cagcgtcgaa atggcgatga gtaaaaacca
     6301 tccgccgcag actttacgcc acctcacagc cagatgctga cgaaagtgac gccaaagtag
     6361 ccagcagaga ataatatgca gcgaaggaga ctggttataa ggcagatcaa acagttcaag
     6421 ttgcgaaaat agccatcctg tcaccccact cacttcagga cggataaaac taaacttcag
     6481 cgggtataga aaaaaaccgc agcaggccat taccgttgcc agaataagcc ggtggacaag
     6541 tcggcgttgt tcgaatgtcg agctacaaac gaacagcgaa aatccatata aaagatccag
     6601 actccagtaa ggaacaatag tccagggaag aaaagggatc gccgtttccc aaccgaatac
     6661 ctgactgggg atatcatggc tgttaaggtc ctgaaccgcg gtgaactgat taagagatcc
     6721 ataggtgaag aagaaaaacg gggccagcaa caataaccag ccagcgcctt gtagcaatac
     6781 gttccgacgt tcagttatca cgacgcaccg ccatcgaaac cgtaaaaata ccccactcat
     6841 caatccgttg tgtgcattta tcaaatccgg catcacgcac gagtgaatcc atctcccctt
     6901 gcgaacgcac gcgcattacc cacggtttac catctttatg actggttaac accccggcaa
     6961 tcagctccag ttgtgggtgc cacggctgcc cggtgtagat gagaatgcca cccggttcga
     7021 tggcattggc aagacctgcg agtgagtttt ttacctgctc attttcggga aaaagctcat
     7081 acagcccaga cacaatcgcc aaggtaggcc gcggagttaa cgcgctgagt tcctccgggt
     7141 taaacgcatc gccctgttca aaacgcaccc gcccagacat tccccgttgg gcaatcatct
     7201 cttgcccctg tgcaacattt aactcactgt aatcacgtaa caaaatatcg cttacggcag
     7261 gctcgtttgc cagcgcatcc agtacatagc gcccatgccc tgcggcaatg tcaaccacac
     7321 ggacggctaa acctttggcg tggagatcgg caacggcttg tttaatcagc atttgtaaat
     7381 gggttttgcg ctggcgaata ccgcgccagc caacactgtt caggtagatt ttgtcgatta
     7441 agcgcccgaa tgcgttacta ccttgcggtt gattttgata gacataatcc agcgaactgc
     7501 ctgaatcaaa gccggtgctc attccgagat gcaggcccgc agagtgcgcc ccgaacaatt
     7561 tcatcgcctt tcgcataaag cgatacgcca aatcaaccgg cgataatggc acgggtccac
     7621 cagaaaggag ccgccatcga tccgctgatg gtcctgtgcg gtcttcatgc tgataatcaa
     7681 atttttgcga cttgttagca tataagcggc tgataaagct ttgcattttt tcaaatgcct
     7741 gcactctgtt ctcttcaccc aacgtatcgt gataaaagcc aggcagcaga tgcaactctt
     7801 tcaaagggct acgtaatctc tgataaaaat caatctgcgg ttgacgatgt accacatagt
     7861 catcgcccga tatcagaagt tgcgtgggga gcgtaatcgc cgccgcatcg ctaacaatac
     7921 gttcagacgt tttatagaga tcgagcaaga tattgacggc aatcgcccgt gtggtcagcg
     7981 gatctttatt gaaactcgcc acccgttggc gatcgtgggt caaatagtgc cctttcacat
     8041 aggaattaat aaaaaacaga ccacgcagat gatgccataa cgccagcgca ggacgtgcca
     8101 gcggcacata caatttaacc ttaaaggccg gagaagccag caccagcccg cgaattgcag
     8161 gcgcataatc atgaacccaa gttgcagcca gcactgcgcc gacgctttgc gcgatcacta
     8221 ccacctcatc cagcccgacc tggctgtcgc tggcagcaaa acggataaaa agcacgatgg
     8281 gcaatagcaa aaagaggatg ggttgtgcca ccaacatcaa cagcaatccg gtaagaagag
     8341 aaagcgccag tgcagcaaga gtgatgtgat tcgctgtaac atggtactta taaagccaaa
     8401 acattgtcgg ccttaacagc gactgaaaga gcggttttat ctggtagagc gtcattatca
     8461 atccttgata attcggtttg cgctatggtg catcaattcc cctgacggag atatcgcaac
     8521 acgacgcttc attaaaaatt cagaatatat caaggtattg gggactcact gtcaggaatg
     8581 attatcccca ataaatcaag tggttaaaaa ttattacgca gttattcaat acaactcatc
     8641 aagttttctc atcgcttgtt cccgtattgc gcgcgtctta ccgttaagcg ccagctggcg
     8701 aactaaatcc agttcagggt taataagctc taacgccagc aaaggatcac gtttcagcct
     8761 cgcctttaat acatcaactg gaaaacgggg attattcatc gccacaatcc accactcggg
     8821 atcaatttct gccgcgagta ctgcaggcgg tgtgtggcgg ttgttaagtg cgccgaactt
     8881 gaaaaatgtg agattgcttt tcgccagtgt actccaccat atacgatccg gttgttttgc
     8941 cagtacatcc agttgcgcta acgcaccggg gtccagagca taataaacac gtaatgcttc
     9001 atcaacctgc gcacgggagc tattttcctg cctcagaaaa aacttcgccc aaatatcatt
     9061 gcgtggcgtg ttttgctgta attccttgag aacaacagcg ggtaaattat cccaactaat
     9121 taatgcactc tctaaaaagt cccagtcttc tgaacgtatc agagaggtgg catttaatag
     9181 catctggtca tcaacttcac cgtagctgat aagctcagac aaaatcatat cagcgctggt
     9241 ttcatatgca gctgaatctg ctttcggatt atttttccga tgcgataaag cacgttgcca
     9301 aattttttgt ttcatcgacg tgctcagata ctgatttttc gccagattac tccacccctc
     9361 aggatcgttg aaacgtgtca ataaccgttg taaagcagcg tcagagtgaa ttatctgcat
     9421 atcccgacag caaaagtagg caggggattt tttctccatc cttttaacaa aattaaactg
     9481 taagttatct ggcaatgcta aaaataacac acgtattaga tcatcgtcat tctcgaattt
     9541 ttggtataaa tagactgcaa ctttgtcact ctcttgtggc gtcatccgca ataattgacc
     9601 atggggtttc atctctgcca gcttgaacgc taagcttgtg acaacattgt ttgatgaatc
     9661 gttcgccaac tgcattccct gattgtaggt gagttgtcct ccagcaccga cctgacgaat
     9721 agaggaatca tcactgcgga tatagccatc aataatggat tcaggcaata accacgcatc
     9781 tttataaagc tcctgaatga tcatatccca atctcttttc gccagagtca tgacgatatc
     9841 cagagggaga ttttcacgta gcgcaagatt caacggaccg acaccatcag gtagacgact
     9901 cattcgcgtc attatttcga cagagagcgg ttcacggtcg agcaacccca gaacaacagg
     9961 ctggtaaccc aattgctgat cggtcaactc cagaatctca ttgtcaggca tatatctcgc
    10021 catactttca atcgtttgtt catcattgct attaataagt tgtttgcgta ggttagctga
    10081 aattccttta agccttggga gagttcgcat tatggcaaga tcaaatgtcg caatatctcg
    10141 tccttcaaat gcagcaacgt tgccttcatc cagcatttgc aattcctgca ctaactcagg
    10201 agaaggctta gggcgaaaca gcgcttcttt tttcatctga ttacagacat tccctgctat
    10261 gcgaatattg cttcgcttaa aaatttcttt cagagcatct tcatcattta ttagacccca
    10321 atgatataca tcaggattta ttatcatcag cgcttttttg acattttcag tgtcattttt
    10381 gtcactcgca cggaccatga attcactatt tgtcgaagac acaacaacag gtgcaattat
    10441 gtcattgata aatatcccac gcgcattaat actcccctta atcgtagacg gattatcgta
    10501 atatgagtcg ataaatacca gtccacttgc atttattgaa ccggtaatta acagtggtga
    10561 atctgtaatt atatttgttg ccgtcacgtt accgagaata acccatggat tagaaataga
    10621 gaaagtggaa atatttcctt tgactgtcaa attgccaaga acaatcaatt tttgattact
    10681 ctctatatta ccttctacca ctaaatcgcc acgatgcact ttccagtccg atgcagataa
    10741 accgaagggg acaagattca cgctactgtt gatagcttgt tcaacttgtt gtttatcttc
    10801 agcggtagcc gcagaaaaaa atggttcaat atcaactgta tttgcaacac atcgaagttc
    10861 cgcctgtact ggaagactca gcataaacag gggaagtaaa cctatccagc cgcaa
//
LOCUS       DAJVTL010000136        10881 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.138, whole genome shotgun sequence.
ACCESSION   DAJVTL010000136 DAJVTL010000000
VERSION     DAJVTL010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10881
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.138"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..283)
                     /locus_tag="OQQ26_003532"
     CDS             complement(<1..283)
                     /locus_tag="OQQ26_003532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1858869.1"
                     /translation="MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTD
                     NTALPKAVEMQYLPGQGLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSL"
     gene            complement(313..1029)
                     /locus_tag="OQQ26_003533"
     CDS             complement(313..1029)
                     /locus_tag="OQQ26_003533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HCS1858870.1"
                     /translation="MVAKINLLSRLTPLLFVFAPFLAQSNMTVYPMAVSINSQGEGNV
                     RVISKSNEVQYIKATVFRIDNPSTPQENEVEIKSGDANHLVVMPPKFALPAGSSKTVR
                     FVAMEPEQKEKNYRVKFEAVPSIDDVATGKKDLSMQLTVNLIWGIVVSVPPQQPIAKL
                     EVNAAKKLVNAGNQRLKLLTIAYCKNNSKENCKIQTVNKNIFPGQERNLESISGYDKI
                     VVKYNNWITKDNGEFELAVH"
     gene            1325..2101
                     /gene="exuR"
                     /locus_tag="OQQ26_003534"
     CDS             1325..2101
                     /gene="exuR"
                     /locus_tag="OQQ26_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ExuR"
                     /protein_id="HCS1858871.1"
                     /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
                     SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
                     LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
                     AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
                     ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK"
     gene            2446..3108
                     /locus_tag="OQQ26_003535"
     CDS             2446..3108
                     /locus_tag="OQQ26_003535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1858872.1"
                     /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
                     AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
                     GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
                     RG"
     gene            3112..3495
                     /gene="mzrA"
                     /locus_tag="OQQ26_003536"
     CDS             3112..3495
                     /gene="mzrA"
                     /locus_tag="OQQ26_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HCS1858873.1"
                     /translation="MQIPRMSLRQLAWSGVVLLLVGTLLLAWSAVRQQESTLAIRAVH
                     QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI
                     IAQQDNNSQAMQWLTRLRDNSHRFG"
     gene            3642..4010
                     /locus_tag="OQQ26_003537"
     CDS             3642..4010
                     /locus_tag="OQQ26_003537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HCS1858874.1"
                     /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ
                     NRIDGLNKALSEVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAK
                     RERKLAEAQEELKKLEARDY"
     gene            4048..4353
                     /locus_tag="OQQ26_003538"
     CDS             4048..4353
                     /locus_tag="OQQ26_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HCS1858875.1"
                     /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
                     QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
     gene            4356..4760
                     /locus_tag="OQQ26_003539"
     CDS             4356..4760
                     /locus_tag="OQQ26_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCS1858876.1"
                     /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
                     ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
                     TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
     gene            4750..5049
                     /locus_tag="OQQ26_003540"
     CDS             4750..5049
                     /locus_tag="OQQ26_003540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqjK-like family protein"
                     /protein_id="HCS1858877.1"
                     /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWN
                     MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
     gene            5235..5627
                     /locus_tag="OQQ26_003541"
     CDS             5235..5627
                     /locus_tag="OQQ26_003541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008503138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HCS1858878.1"
                     /translation="MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVP
                     GFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKN
                     LTISGGFLLLAITGPGAYSIDRLLNKKW"
     gene            5697..6683
                     /gene="yqjG"
                     /locus_tag="OQQ26_003542"
     CDS             5697..6683
                     /gene="yqjG"
                     /locus_tag="OQQ26_003542"
                     /EC_number="1.8.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionyl-hydroquinone reductase YqjG"
                     /protein_id="HCS1858879.1"
                     /translation="MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTANGAPGPTG
                     TGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSF
                     PGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAF
                     DALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLA
                     RLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRD
                     IYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG"
     gene            6976..7344
                     /locus_tag="OQQ26_003543"
     CDS             6976..7344
                     /locus_tag="OQQ26_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708910.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HCS1858880.1"
                     /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
                     GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
                     CQAGTPGENRFGPDPKLEQE"
     gene            complement(7551..8447)
                     /gene="yhaJ"
                     /locus_tag="OQQ26_003544"
                     /pseudo
     CDS             complement(7551..8447)
                     /gene="yhaJ"
                     /locus_tag="OQQ26_003544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708911.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator YhaJ"
     gene            8552..9253
                     /locus_tag="OQQ26_003545"
     CDS             8552..9253
                     /locus_tag="OQQ26_003545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HCS1858881.1"
                     /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
                     QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQARAGEALLLSTQPGVSYS
                     EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGAMGSLQLRQQVW
                     LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
                     VADSPLRALLIDLPV"
     gene            9276..9440
                     /locus_tag="OQQ26_003546"
     CDS             9276..9440
                     /locus_tag="OQQ26_003546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858882.1"
                     /translation="MSKKLAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
                     TRLAEDEATA"
     gene            complement(9574..>10881)
                     /locus_tag="OQQ26_003547"
     CDS             complement(9574..>10881)
                     /locus_tag="OQQ26_003547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HCS1858883.1"
                     /translation="FDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELE
                     GPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQA
                     IADAKALLAAGKVSVKIQEPCDEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGV
                     VFTQQACVAEGEQESSLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGL
                     SGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQG
                     ITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAG
                     MAWLVDGRYETISMAISSMIGDVSGMICDGASNNCAMKVSTSASAAWKAVLMALDDTA
                     VTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
BASE COUNT         2722 a         2770 c         2654 g         2735 t
ORIGIN      
        1 ccaggctttg aaccagttgc gccggggaaa ctaactgcat ttttacatct ttggtaacgt
       61 cgttagacca gattttggtc attaactggt aagattgcag accctgaccc ggcagatatt
      121 gcatttctac tgctttcggc agcgcagtgt tatcggtctg tgtcatatcc agagcggcat
      181 caacgttagc cgttacagtg atatcctttt gtactgctaa tgcggagcct gcaacagaaa
      241 acatcgctgc gaccagaaga gattttgcaa ataccttttt cattactatt ccttcgtttg
      301 ttacaatgat aattaatgga ccgccagttc aaactcgcca ttatctttgg tgatccagtt
      361 attatatttg acaacgattt tgtcgtagcc agatatgctt tcgagatttc tttcctgacc
      421 agggaagatg tttttattta cggtctgtat cttacagttt tctttgctat tatttttaca
      481 ataagcgatc gttaaaagct ttaagcgttg attccctgca ttaactaatt ttttggcagc
      541 atttacttct aacttagcaa taggttgctg aggtggaaca ctaacaacaa tcccccaaat
      601 taagttaact gttaactgca tagagagatc ttttttaccc gtggcaacgt catcaatact
      661 gggaaccgct tcaaatttaa cgcgataatt tttctctttt tgctctggtt ccatcgcaac
      721 aaaacgtaca gttttgctac taccggctgg taaagcgaat ttaggtggca taacaaccag
      781 atgatttgca tcaccggatt taatctcaac ttcattttcc tgaggcgtcg atggattatc
      841 gatacggaat actgtcgcct tgatgtactg aacttcatta cttttagata ttacgcgaac
      901 gttgccttca ccctgactat taatggaaac agccatagga taaacagtca tatttgactg
      961 tgccaaaaaa ggagcgaaca cgaataaaag cggcgtaagc cgtgataaga gattaatttt
     1021 cgccaccata taaatttgat cttacaatat tgtttccaaa aagttggtgt attagagatg
     1081 tagatttatt gtaagtcaat ataaaaaagc atttttagtt aatattaaat ttaaaggctg
     1141 gaaattaact tactgaaatt tagtaacttt cacaatgacg atacttattt tttaggaatt
     1201 tataaatatt cacaatatta atttaataca ttaattcaat catcaaattt atatatgacc
     1261 aatggcatac ccatgaataa agtggtatga taacttcgtc cgcattccac tccgggagac
     1321 gcatatggaa atcactgaac cacgccgttt gtatcaacaa cttgctgctg acctgaaaga
     1381 gcgcattgaa cagggcgtct atctggtggg tgataaactg cctgccgaac gctttattgc
     1441 cgatgaaaag aacgtcagcc gaacggtagt tcgtgaagcc atcatcatgc tggaagttga
     1501 aggctatgtg gaggtgcgta aaggttcagg tattcatgtg gtttccaacc agccgcgcca
     1561 tcagcaggcg gctgacaata atatggaatt cgccaattac ggtccgtttg agttgcttca
     1621 ggctcgccag ctcatcgaaa gtaatattgc cgagttcgcg gcaactcagg taacgaaaca
     1681 agacatcatg aaactgatgg ccattcagga acaggcgcgc ggcgaacaat gcttccgtga
     1741 ttccgagtgg gatttacagt tccacattca ggtagccctg gcgacgcaga actccgccct
     1801 ggcggccatc gttgaaaaaa tgtggaccca gcgtagccat aacccgtact ggaaaaaact
     1861 acacgaacac attgattccc gtaccgttga taactggtgt gatgaccacg atcaaattct
     1921 caaggcgtta attcgcaaag atcctcatgc tgctaagctg gcaatgtggc agcatctgga
     1981 aaacaccaaa atcatgttat ttaacgaaac cagcgacgat ttcgagttca atgccgaccg
     2041 ctatctattc gccgaaaacc cggtagtgca tctcgatacg gccaccagtg gcagtaaatg
     2101 aaactcctgt ccgactggcg ctgcgacgcg cctgttcgct tcgtcggtaa gcgaaaagta
     2161 taaagtgtca gcctgtgtaa atcctctcgc cacccttccc tgcattcagc aaaatcagac
     2221 tccacggaca tgtaattttg ataacgaaca acgttgacct ttgttacaat tagattcaat
     2281 ttgaatttat gtttttgaat gctttcttat ctcacgattt aacagggaat agttcaggct
     2341 gtgttgatgt atcaaacccg cagaacatac caaaacagca ataacattgc ggtagtgcat
     2401 cttttaaaac cagcgtggcg ttaaccgatt caccaggaat aatgaatgga acttttgacc
     2461 caattgctgc aagccctgtg ggcgcaggat tttgaaaccc tggccaatcc atcgatgatt
     2521 ggcatgttgt attttgtctt gtttgtaatt ttgttccttg aaaacggctt gcttccagcg
     2581 gcctttttac cgggcgacag tttactggta ttggtcggcg tgttgattgc gaaaggcgcg
     2641 atgggttacc cgcaaacgat tctgctgctg accgttgccg ccagcctcgg ctgctgggtc
     2701 agctatattc aggggcgatg gctgggcaat acccgcaccg tacaaaactg gctatctcat
     2761 ttacccgcgc attatcatca acgcgcacac catctttttc ataaacacgg tttatcggcg
     2821 ctgttaattg gtcgctttat tgcgtttgtc agaacactgc tgccgacgat tgccgggtta
     2881 tcagggctga ataacgcgcg ctttcagttt ttcaactgga tgagcggtct gctgtgggta
     2941 ttgatcctga caactctggg ttacatgctc ggcaaaacgc cggtattttt aaagtacgag
     3001 gaccagctga tgtcatgcct gatgctgctc ccggtggtgc tgctggtgtt tggcctggca
     3061 ggttctctgg tcgtgttatg gaaaaagaaa tatggaaatc gggggtaagg gatgcaaata
     3121 cctcgcatgt cgcttcgcca gctagcctgg tccggcgttg ttttacttct ggtcggcacg
     3181 ctgttgctgg cctggtccgc ggttcgccag caggaatcta cgctggcgat tcgtgccgtt
     3241 catcaaggca caacgatgcc agacggtttt tcgatctggc atcaccttga cgctcatgga
     3301 attcctttca aaagtatcac ccccaaaaac gacactctgt taattacatt tgactccagc
     3361 gaccagagcg ccgccgcaaa agcggtcctc gacagaacat tgccccatgg ctacatcatt
     3421 gcgcagcagg acaataatag tcaggcaatg cagtggctaa cccggttgcg ggataactct
     3481 catcgcttcg gataacttcc tgttatccga aacatatcac tcactttggt gatttcaccg
     3541 taactgtcta tgattaatga ggcggtggtt aacactaccg cttcgttgtc tggacaatcg
     3601 ttcctttgta ataggtccga atcacaatgg aaggttcaag aatgaaatac cgcatcgctt
     3661 tagctgtttc tctctttgct cttagtgccg gtagttatgc cactaccctg tgtcaggaaa
     3721 aggagcaaaa tatccttaag gagatcagct atgccgaaaa acaccaaaac cagaatcgta
     3781 ttgacggtct gaataaagcc ctgagtgaag tccgggccaa ctgttcagat agccagctgc
     3841 gtgccgatca tcacaagaaa atcgcaaagc agaaagatga ggtggcggaa cgccagcaag
     3901 atttagccga ggcgaagcaa aaaggcgatg ccgataagat tgccaaacgc gaacggaaac
     3961 tggcagaagc gcaggaagag ctgaaaaagc tggaagcgcg cgactactaa ctcacaatag
     4021 tcactactta ctcacctgga gaaaactatg tcgaaagaac acactacgga acatctgcgt
     4081 gctgagttga aatccctttc cgatacgctg gaagaggtgc ttagctcatc tggcgagaag
     4141 tcgaaagaag agttgagtaa gattcgtagc aaagcggagc aggcactgaa acagagccgt
     4201 tatcgcctgg gtgaaaccgg tgatgccatc gccaaacaaa cccgtgtcgc ggcggcgcgt
     4261 gctgatgagt atgtgcgtga aaatccgtgg accggcgtgg gcattggcgc tgcaatcggt
     4321 gtagtgctcg gcgttctgct gtcgcgtcgt taattatggc ggacactcat cacgcgcaag
     4381 ggcccggtaa aagcgttctg ggcatcgggc agcgaattgt ttccatcatg gttgaaatgg
     4441 tggaaacacg tctgcggctg gcggtggtgg agctggaaga ggaaaaagct aatctctttc
     4501 aacttttact gatgctgggc ctgacgatgc ttttcgctgc atttggtctt atgagcctga
     4561 tggtgctaat tatctgggcg gttgatccgc aatatcgcct gaatgcgatg attgccacca
     4621 ccgtggtgtt gctgctactg gcactgatcg gcggtatctg gacgttacgt aaatcgcgta
     4681 aatccacctt gctgcgccat acacgccatg agctggcaaa cgatcggcag ctgctcgagg
     4741 aggagtcccg tgagcagtaa agtcgaacgt gaacgacgta aggcgcaact gcttagccag
     4801 atccagcaac aacggctgga tctttccgcc agtcgtcgtg aatggctgga ggcaacaggc
     4861 gcttacgatc gtcgctggaa tatgctgcta agtctgcgct cctgggcgct ggttggcagt
     4921 agcgtgatgg cgatctggac gattcgccat cctaatatgc tggtccgctg ggccagacgc
     4981 ggttttggcg tatggagcgc ctggcgtctg gttaaaacga ccctcaagca gcaacagctt
     5041 cgcggttaac ttccctctgg ccggagcaat tccggcctta tccctcaaat tttttgaaga
     5101 tttttgacag ttttccttgc taacaatcat cattcaccac gtttatgatt ctctccatcg
     5161 acagcaacga cgctaatacc gcgcccttgc acaaaaaaac aatcagcagc ctgagtggcg
     5221 cagtggagag tatgatgaaa aaattagaag atgttggtgt actggtagcg cgcattttaa
     5281 tgccgattct gtttattacc gcaggctggg gaaaaattac tggttacgcg ggtacccaac
     5341 aatatatgga agcgatgggc gttccgggtt ttatgctgcc gctggtgatt ctgcttgagt
     5401 ttggtggtgg tctggcaatc ctgttcggtt tcctgactcg caccacagcc ctgtttactg
     5461 cgggctttac gctgctgacg gcatttttat ttcacagcaa ctttgctgaa ggcgtcaact
     5521 cgctgatgtt catgaaaaac ctgacaattt ctggcggatt cctgctgctg gcaattaccg
     5581 gtccgggcgc gtatagcatc gaccgcctgc tgaataaaaa gtggtaagca cgcgctatac
     5641 ttaacgataa aaaacgagga ggaagctcct cgtttttgct attggaggag agaaaaatgg
     5701 gtcaactgat tgacggcgtc tggcatgaca cctggtacga taccaaatct accggcggta
     5761 aatttcaacg ttcagcttcc gcatttcgta actggctcac tgccaatggc gcacctggcc
     5821 ccactggcac aggcggtttt atcgcagaga aagatcgtta tcatctctat gtttcactcg
     5881 cctgcccgtg ggcgcaccgc acgctgatca tgcgcaaact caaaggactg gaaccgttta
     5941 tttccgtttc cgtagtgaac ccgctgatgc tggaaaacgg ctggaccttt gatgacagtt
     6001 ttccgggagc aaccggagat acgctctatc aacatgaatt tctgtatcag ctttatctcc
     6061 acgccgatcc acactacagc ggacgagtta ctgttcccgt gctgtgggac aaaaagaacc
     6121 acaccatcgt cagcaacgaa tcagcagaaa tcatccgcat gttcaatacc gcgtttgatg
     6181 cgctgggcgc gaaagcgggt gattactacc caccagccct gcaaacgaaa attgacgaac
     6241 ttaacggctg gatttatgac accgttaaca acggcgtgta taaagctggt tttgccacca
     6301 gccagcaagc ctacgacgag gcggtggcga aagtgtttga atcgctggcg cgactggagc
     6361 agattttagg ccagcatcgt tacctgaccg gcaaccagct aaccgaagcc gatattcgcc
     6421 tgtggactac gctggtgcgt tttgatccag tgtatgtgac ccacttcaag tgtgataagc
     6481 accgcatcag cgattacctg aatctgtatg gcttcctgcg cgatatctac cagatgccgg
     6541 ggatcgccga aactgtcaat ttcgatcaca tccgtaatca ttacttccgc agccataaga
     6601 ccatcaaccc tacggggatt atttcaattg gtccgtggca ggatctcgat gaaccgcatg
     6661 gacgagatgt tcgcttcggt taaaaaaaga caccttacga ggtgcctctg ataattagct
     6721 aagtgcatgt tgttcatgtc ggatgcggcg tgaacgcctt atcaaaccta caaagcgtct
     6781 atattcaata tgttacaatg accgcgtagg ccagataagc gtagcgcatc tggcgatttt
     6841 gcgcttgcca tcagtcttag cgcgccttca cggcacttta ttaattcctt gaacgaatat
     6901 ttactgccat ttcattcacg tctattctta atttgctgct ttaaaaacaa gtgattgagc
     6961 aaaattgagg caaaaatgga ctggtatctg aaagtactaa aaaattatgt cggtttccgg
     7021 ggtcgtgcgc ggcgcaaaga gtactggatg tttattctgg tcaacatcat ctttacgttc
     7081 gtgctggggc tgctggataa aatgttaggc tggcaacgcg ctggtggcga aggcatcctg
     7141 acgacaatct acggtattct ggtgttttta ccgtggtggg cggttcagtt ccgccgcctg
     7201 cacgacaccg accgctcggc gtggtgggca ctgctattct taatcccgtt tatcggctgg
     7261 cttattatca tcgtctttaa ctgccaggcg ggtacgccag gcgaaaaccg ctttggacca
     7321 gatccaaaac tggaacaaga ataatgatta agcaccttgt aaaaggtgct tcaaattgtt
     7381 gacaaagtgc gctttgttta tgccggatgc ggcgtaaacg ccttatccag cctacaaatt
     7441 gccaaaattc aatatattgc agtgactgcg taggcctgat aagcgtagcg catcaggcag
     7501 ttttgcgttt gtcagcagtc agaagcacct tgtgaaaggt gcttaataga ttattttcca
     7561 gcgaacaact ttggaatttc ccgcagacac caggatttcg cctcccccat actgtcgcga
     7621 cgccaggcca taataatatc gatctcgctg gtcgattccg ggctgacgac acgcaaccgc
     7681 ccttccgcaa tatctttttc gaccatcgga tacggcatcg tcgccacgcc aagccccgcc
     7741 agtaatgcct gacgtttatc ttcaatcgtg ctcaccgtta agcgcggctg tttgtccagc
     7801 agctgtacgg tcaacaccgg gcgctcacga gcggtatccg ctaccgcaat tccacgatat
     7861 ttcacgcgcg tcacttcaga taacggttcc ggctcctgat gaatcgggtg atcaggcgcg
     7921 gcaacgtaga cgttcattaa ggtatagagc ttgcgcgagt tgatctccga cgaggaacga
     7981 aaatgcatat ccggcgcgat aacgatatcc gcccgcccct gctccagtcg ttcccacgcc
     8041 cccgccagca cttcggtgat gattgccagt tgggtattgg cttttgccgc cagtttgtcg
     8101 attaacggga aaaaggcagg tgtcggtacc agcgcctcgg tcacaatggt gagatgcgtt
     8161 tcccaaccgc gcgcgagggc ttccgcatcg gtagtcagtt tatctgcggc ttccagcaaa
     8221 acgcgccctc gctccagcaa catcctcccg acattggtga atttggtgcg atggcccgag
     8281 cggtcaaaca gcaccacatc cagctcttct tccagttttt gcatggtgta gctaagtgcg
     8341 gaaggcacgc gtcccagcta atccgctgcc gccgcaaaac tgccccggcg atcgatcgca
     8401 tccataaccc gtagtgcttc cagcgttaat gccctttctt tggccatttc gttctcattc
     8461 aggaaatttg aacataccgg gcagaatatc tggctaacaa tgtagcgtcc agccccttac
     8521 cataaaagga agtaaagaga ggtcaagaat tatgattact acccgaactg ccaggcagtg
     8581 tggacaagca gactacggat ggttgcaggc ccggtatact ttttcctttg gacactactt
     8641 cgaccctaaa ttgttaggct atgcctccct gcgtgtgctt aaccaggaag tgctggcccc
     8701 aggtgccgcc tttcagccgc gaacctatcc caaagtcgat attttaaatg tgattctgga
     8761 tggagaagca gagtatcgcg acagcgaagg caatcatgtt caggccagag ccggagaggc
     8821 gttgctgctc tctacccagc cgggtgtcag ctatagtgaa cacaatctca gcaaagacaa
     8881 accgttaacg cgaatgcagc tttggctgga cgcctgcccg cagcgagaga atccgctgat
     8941 tcaaaaactg gcgcttaata tgggcaagca gcaattaatc gcctcgccag agggtgcgat
     9001 gggaagcctg caactgcgcc agcaagtgtg gctgcaccat atcgtgctcg acaaaggcga
     9061 aagtgcgaat ttccagttgc atggaccacg cgcgtatttg caatcgattc acgggaaatt
     9121 tcatgcgctt acgcatcatg aagagaaagc ggcgctgacc tgcggtgatg gggcgtttat
     9181 tcgtgacgag gctaacatta cgctggttgc cgattcccca ctgcgcgctt tgctgataga
     9241 tttgcctgtc tagttgtttt tacagggaga tgatgatgag taaaaaattg gccaaaaagc
     9301 gccagccggt gaagcccgtg gtggcgaaag aacctgctcg caccgccaaa aattttggct
     9361 atgaagagat gttgagcgag ctggaagcca tcgtcgcgga tgctgaaacg cgtttagccg
     9421 aggatgaagc taccgcgtaa agacaggttg ccggatgcgg tgaaaacgcc ttatccggcc
     9481 tacaaaatcc aacaacatta acgaattaaa caacccgtag gccggataag atgcgccagc
     9541 atcgcatccg gcacgatacc caaaacctgg cgtttatctg gccttgctcg ccataatctc
     9601 gataatctgc cgatccgttt gctgcatcga atggcttgct aatgcacaca ggttggcaat
     9661 cgactgctca acatcatgcg ccacgatccc ttcattgccg gtcacggcgg tatcatccag
     9721 cgccattaac accgctttcc acgcagccga agcactggtc gacaccttca tcgcgcagtt
     9781 gttcgacgca ccatcgcaaa tcatgccgct gacatcgccg atcatactgc tgatcgccat
     9841 cgagatggtt tcataacgcc catccaccag ccatgccatc ccggcggcgg cccccattgc
     9901 tgcggtcgtt gcggcacaca gcgcagacaa acgcggtaac tggttatgga tgtaaatcgc
     9961 gctcaaatgc gaaagcatca gcgcacgcgc tagccgttca tcatccgctc cgaagtgttc
    10021 tgctaccacc accacaggca ttgttgcggt gatcccctgg ttacccgagc cggagttact
    10081 catagccgga agcgtagcgc cgcccatacg cgcatcggat gccgcgctgg tacgaatcac
    10141 aatggatgaa gagagatctt tcgccagcaa accgcgctcg cactgttttt ccagcgtcgc
    10201 gccaatatgc agcccccact taccgctcaa accttcctgc gataacgcac aatttagctt
    10261 cgcggaatcg agaataaagc ggatcgccgc aaacgggact tcattgacga acttcaggat
    10321 ctcagccagc gtcgttctgg aaagcaccgt cagcgacgac tcttgctcgc cctctgccac
    10381 acacgcctgc tgagtaaaca ccacaccatt gtgcgtctca atatgcacaa tgttggtatg
    10441 cccgccgacg atggtgacac acgcccactt ctcaccgttc cagactttgg cgcgtgagaa
    10501 gaggatttca tcgcaaggtt cctggatctt aactgagact ttccccgccg ccagcagcgc
    10561 tttggcatcg gcaattgcct gcgcagttgc gtctttcagc acttccagcc cggcgttggc
    10621 atttccacct aacgccccca gcgccgccgc aatcggcagc cccaccattc ccgtgccggg
    10681 aacggtgacg cccagaccgt tcttcatcag atttggcgaa acccaggctt ctacacgttc
    10741 aaccggacct tccagttctg ccgcagcaac cgccgccgcc agcgccagtg aaatcggttc
    10801 agtacatccc agcgccggtt ttacttcctc ctgaacggcg aggatgtaac gctgccataa
    10861 cggatttaaa gtcgaatcaa a
//
LOCUS       DAJVTL010000137        10778 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.139, whole genome shotgun sequence.
ACCESSION   DAJVTL010000137 DAJVTL010000000
VERSION     DAJVTL010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10778
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.139"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..815
                     /locus_tag="OQQ26_003548"
     CDS             <1..815
                     /locus_tag="OQQ26_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000908053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858884.1"
                     /translation="QHPYLNDVPLIDELRHQNTHHVILLTLDVAKKILSPITSFDYIH
                     FITTHPSGIKDTLAWLVNASKLMTEFDDNGKIIFNLNALKYTKASYFEILGEKYIKIT
                     TSSPWLLEKLGKYIFSSRAPQVLELAIGWRGALSESIKGVKFCIWFSVAWRTIEFIMS
                     SERDLVNFLGDFSMDVAKAVIAGGVATAIGSLTSFACVSFGFPVILVGGAILLTGIVC
                     TVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFLYVLNTPPVI"
     gene            825..1304
                     /locus_tag="OQQ26_003549"
     CDS             825..1304
                     /locus_tag="OQQ26_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858885.1"
                     /translation="MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCST
                     EIFYDWRMLILCFGFMSFSFLNIHVILLAIIKSFLIKKTKVVNFATDITIQLTLIFLL
                     IAIVIAPLIAPFVTGYVNANYHPCGNNTGISPGAIYIKNGIKCNNEYISRKEDSAVK"
     gene            complement(1441..2226)
                     /locus_tag="OQQ26_003550"
     CDS             complement(1441..2226)
                     /locus_tag="OQQ26_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858886.1"
                     /translation="MNLRRVCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTP
                     QQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMR
                     KYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIV
                     FQDTLQTGKYDSGLKSIVWSDYKNQKMTDTMSLRYLVRFTLVDVATGEWATWSPVNYE
                     YKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ"
     gene            complement(2556..2632)
                     /locus_tag="OQQ26_003551"
     tRNA            complement(2556..2632)
                     /locus_tag="OQQ26_003551"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2596..2598),aa:Asp,seq:gtc)
     gene            complement(2765..3496)
                     /gene="dnaQ"
                     /locus_tag="OQQ26_003552"
     CDS             complement(2765..3496)
                     /gene="dnaQ"
                     /locus_tag="OQQ26_003552"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HCS1858887.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
                     DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
                     DEELAAHEARLDLVEKKGGSCLWRA"
     gene            3561..4028
                     /gene="rnhA"
                     /locus_tag="OQQ26_003553"
     CDS             3561..4028
                     /gene="rnhA"
                     /locus_tag="OQQ26_003553"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HCS1858888.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN
                     NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD
                     LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV"
     gene            complement(4025..4747)
                     /locus_tag="OQQ26_003554"
     CDS             complement(4025..4747)
                     /locus_tag="OQQ26_003554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308236.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCS1858889.1"
                     /translation="MKPARVPQTVVAPDRWGDLPWGELYRKALERQLNPWFTKMYGFH
                     LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLREADRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQL
                     DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ
                     SKNKPRIRQAVGATRQCRKPQA"
     gene            4781..5536
                     /gene="gloB"
                     /locus_tag="OQQ26_003555"
     CDS             4781..5536
                     /gene="gloB"
                     /locus_tag="OQQ26_003555"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HCS1858890.1"
                     /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW
                     QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
                     SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTL
                     VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR
                     TEDIDLINVINEETLLQQPEERFAWLRSKKDRF"
     gene            5608..6966
                     /gene="mltD"
                     /locus_tag="OQQ26_003556"
     CDS             5608..6966
                     /gene="mltD"
                     /locus_tag="OQQ26_003556"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HCS1858891.1"
                     /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
                     RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
                     YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
                     DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
                     WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
                     MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVAD
                     NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR
                     LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP
                     DS"
     gene            complement(7014..7784)
                     /locus_tag="OQQ26_003557"
     CDS             complement(7014..7784)
                     /locus_tag="OQQ26_003557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HCS1858892.1"
                     /translation="MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQRLAVRLADYP
                     DASVLDMGCGAGHASFVAAQNVSAVVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAE
                     SLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWL
                     QTVEALRDTSHVRNYASGEWLRLINEANVIVDNLITDKLPLEFSSWVARMRTPEALVD
                     AIRIYQQSASTEVRTYFALQNDGSFTSDIIMVEAHKAA"
     gene            complement(7862..8662)
                     /locus_tag="OQQ26_003558"
     CDS             complement(7862..8662)
                     /locus_tag="OQQ26_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HCS1858893.1"
                     /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI
                     RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRKRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
     gene            8903..9817
                     /locus_tag="OQQ26_003559"
     CDS             8903..9817
                     /locus_tag="OQQ26_003559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1858894.1"
                     /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP
                     VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIHAGTLTDSSLRARPLF
                     NSYRKIIASPDYISRYGKPETIDDLKQHVCLGFTEPASLNTWPIACSDGQLHEVKYGL
                     SSNSGETLKQLCLSGNGIACLSDYMIDREIARGELVELMADKVLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEHVKTAPGGAVREA"
     gene            complement(9814..10617)
                     /gene="dkgB"
                     /locus_tag="OQQ26_003560"
     CDS             complement(9814..10617)
                     /gene="dkgB"
                     /locus_tag="OQQ26_003560"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HCS1858895.1"
                     /translation="MAIPAFGLGTFRLKDDVVISSVKTALELGYRAIDTAQIYDNEAA
                     VGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPN
                     DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQ
                     NRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSV
                     IPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD"
BASE COUNT         2973 a         2462 c         2444 g         2899 t
ORIGIN      
        1 ctcagcaccc ttatcttaac gacgtcccac tcattgatga gttaaggcat cagaacactc
       61 atcatgttat tctcttgaca cttgatgttg caaaaaaaat actcagccca ataacatcat
      121 ttgattacat tcattttatc actacacatc cttcaggtat aaaagataca ctcgcctggt
      181 tagttaacgc gagtaaatta atgactgagt ttgatgacaa tgggaaaatt atatttaacc
      241 ttaatgcctt aaagtataca aaagcaagtt actttgaaat acttggagag aaatatataa
      301 aaatcacaac atccagcccc tggcttttag aaaagctcgg taaatatatt ttctcttcac
      361 gagcgcctca agttctggaa ctcgctattg gctggcgagg agctttatct gaatcaataa
      421 aaggagttaa gttctgtatc tggttttcag tagcctggag aaccatagaa tttattatga
      481 gttcagagcg agatctggtt aattttcttg gcgatttttc aatggatgtg gccaaagcag
      541 ttatagccgg tggtgttgca accgctattg gaagcctgac ttcttttgcc tgtgttagct
      601 ttggctttcc agtaattctt gtcggaggag caattttact gacagggata gtgtgtacag
      661 ttgttttaaa tgaaatcgat gctcaatgcc atttatcaga aaaattaaaa tatgcaatta
      721 gagatggact aaaacggcaa caggaacttg ataaatggaa aagggaaaac atgactccat
      781 ttctgtatgt tcttaacact ccacccgtga tatgaggatt aaccatgcgt ttacatgtta
      841 aattaaaaga gtttctttcg atgtttttta tggccatatt atttttccct gcattcaatg
      901 cttctttgtt ttttaccgga gttaagcctc tatattcaat aataaaatgc tccacggaaa
      961 tattttatga ttggagaatg ttgattctgt gcttcggttt catgtcgttt tcctttttaa
     1021 atattcatgt aattttactt gcgataataa aatcattctt aatcaaaaaa acgaaggtag
     1081 tcaatttcgc cacagacata acaatacagc taactcttat atttttacta atagctatcg
     1141 taatagcacc tttaatagct ccttttgtca caggatatgt caatgctaat tatcacccct
     1201 gtggtaataa tacgggaatt tccccaggag caatctatat taaaaatggc ataaaatgta
     1261 ataatgaata tatttctcgc aaggaagatt cagcagttaa ataattaaat attctaaaac
     1321 aaacagtttt taactccgga ttccatgtcc tttcttgcac tgtctttgtc aagaaaaatt
     1381 tcttatgcaa agaattttgt attatttccg ccagaaattc ctggcggcag atataattta
     1441 ttattgatag cggttaacca aatcttttac catcgcttta taggtctttt gcttaagttg
     1501 catgatttgc tgctctgtca tatcagtcgt actggcttca ttcttgtcgg gcaatggtgg
     1561 aagcacttta tattcataat tcaccggcga ccaggtagcc cactcacctg ttgccacatc
     1621 caccagcgtg aatcgtacca gatagcgcag tgacatcgtg tcagtcattt tttgattttt
     1681 ataatctgac caaactattg atttcaatcc agagtcatat tttcctgtct gcaacgtatc
     1741 ctggaaaaca ataatcgctt tctgatgccc ttttgcagcc acaaaacgca gtgcctgcat
     1801 ccagttcata ttctcagcac tggcaacatc ctcgttctca tttttatctt tgtttttgtt
     1861 acaagtcaga ggcttttgcc tgtccgggat accagagaat gtggaaacag tataatattt
     1921 tcgcatctcc tcctgcataa tggtttccgg tgcgcggttg ccggattgaa caagtattac
     1981 aggagaatta aggggaacgc ggaactcatc tccatcaagc gcagcttgaa tatcctcttc
     2041 ggatacggcc agagtggttt cattaccgaa taaatctttg tctgtcagtt gctggggagt
     2101 gtttttatta atattacttt gtgtgacttg agcttttttc ttcttttcat caatagaaga
     2161 ttcagaggca catcctgcaa gcagcgagaa taatacacat atacaacaaa cccttcttaa
     2221 attcataatc ggacactccc tcgcctgtca taatcatggt aatgtttagc taacgatttt
     2281 taattatata ctccacttga atcagaacaa acaaaaataa cagtatatat aaattcatta
     2341 aatcaataga aaaatgaaaa tcataacatt caaatatatt taaattgaat gattcgatag
     2401 tatgattaaa tattaatgat atggtctacc atatgtgatt aacacattta cagcataaca
     2461 aaaccataga ccgaagaaat agcgggattt aaatgcaaaa aaaccgcaaa attaaaaata
     2521 ttgcggttct ctgaactcat tttcatgagt gaatttggcg gaacggacgg gactcgaacc
     2581 cgcgaccccc tgcgtgacag gcaggtattc taaccgactg aactaccgct ccgcgttgtg
     2641 ttccgttggg aacgaggcga atattacgga ttgcctcacc cttcgtcaac ggtttttctc
     2701 atcttttgaa tcgtttgctg caaaaatcgc ccaagccgct atttttagcg ccttttacag
     2761 gtatttatgc ccgccagagg cagcttccgc ccttcttctc caccagatca agacgggctt
     2821 catgagctgc aagctcttca tctgtcgcaa aaacaacgcg taacttactt gcctgacgta
     2881 caatgcgctg aattgttgct tcaccttgtt gctgctgtgt ctctccttcc atcgcaaaag
     2941 ccatcgacgt ttgaccaccg gtcatcgcca gataaacttc cgcaaggatc tgtgcatcga
     3001 gtaatgcccc gtgtagcgtt cgtttactgt tatctatttc gtagcgggca cataacgcat
     3061 cgaggctgtt gcgcttacca ggaaacattt tcctcgccac agcaaggcta tcggtgacct
     3121 tacagaaggt attggtcttc ggaatatcgc gcttaagcaa cgaaaactcg tagtccataa
     3181 agccgatatc gaacgctgcg ttatggatca ccaactccgc gccgcggata tagtccatga
     3241 actcatcggc tacttcggca aacgtgggct tatcgagcaa aaattcatcg gcaataccat
     3301 gtacgccaaa ggcttccgga tccaccagcc gatcgggttt gagataaaca tggaagttat
     3361 tgcccgtcag gcgacggttc accacttcaa cggcaccaat ctcaatgatc ttgtggcctt
     3421 catagtgcgc accaatctgg ttcataccgg tggtttcggt atcgagaacg atctggcgtg
     3481 taattgcagt gctcatagcg gtcatttatg tcagacttat cgttttacag ttcgattcaa
     3541 ttacaggaag tctaccagag atgcttaaac aggtagaaat tttcaccgat ggttcgtgtc
     3601 tgggcaatcc aggacctggg ggttacggcg ctattttacg ctatcgcgga cgcgagaaaa
     3661 cctttagcgc aggctacacc cgcaccacca acaaccgtat ggagttgatg gccgctattg
     3721 tcgcgctgga ggcgttaaaa gaacattgcg aagtcatttt gagtaccgac agccagtatg
     3781 tccgccaggg tatcacccag tggatccata actggaaaaa acgtggctgg aaaaccgcag
     3841 acaaaaaacc agtaaaaaat gtcgatctct ggcaacgtct tgatgctgcg ctggggcaac
     3901 atcaaatcaa atgggaatgg gttaaaggcc atgccggaca cccggaaaac gaacgctgtg
     3961 atgaactggc tcgtgctgcg gcaatgaatc ccacactgga agatacgggc taccaagtcg
     4021 aagtttaagc ttgtggttta cgacattgcc gggtggctcc aaccgcctgg cgaattcgtg
     4081 gcttgttttt actctgtttc atcgggttta gcgttaaagg aatagtccgt ttccgggcaa
     4141 caataagttg taagcaacca agcgcaggaa tatgcgcatt caatagtttt ccaccatgtt
     4201 tgttccacgg gagaacgtgg aaacggctgg cgtgtagcac ttcaaaattc aacaaagaga
     4261 gccagtccag ctgccgcatc agagtaaaca tccggctgtt atagggcgag gttttgcgca
     4321 ataccggcac aagtttgcgt aatcccatta aactgatggg attgaagcca ctaatgacca
     4381 gccagccatc atcaatcaat acccgatcgg cttcacgcaa taaacgatgt ggatcggtgc
     4441 accacggcaa tgtatgtgcc agtagacaaa catcaacgga tttatcggca aaaggaagat
     4501 gaagtgggtc cgcctgtacc tggacgggca ttccttgcgc agaaacattc acttgatgag
     4561 aaaccgcgca cgcttcgcaa ttgatttctg cgcttaaatt gccaatctta agcagatgaa
     4621 aaccatacat tttagtgaac cacgggttga gctggcgctc cagcgccttg cgataaagct
     4681 ctccccaggg caaatcgccc cagcgatcag gagccacgac agtttgaggg actcttgccg
     4741 gtttcatcac aaccttccgt ttcacactaa gaggtaatct atgaatctta acagtattcc
     4801 cgcctttgat gacaattaca tctgggtttt gaatgatgaa gcaggtcgct gcctgattgt
     4861 cgatcccgga gacgcagagc cagtattaaa cgccattgcc gccaataact ggcaaccgga
     4921 ggccatattt ctcacccacc atcatcacga tcacgttggc ggcgtaaaag aactggtgga
     4981 aaagtttccg caaattgtgg tgtatggtcc acaagagaca caagataagg gaacaacaca
     5041 ggtagtcaaa gatggcgaaa ctgccttcgt tttggggcat gaatttagtg taattgccac
     5101 accgggtcac actttaggac atatctgtta cttcagtaaa ccttatctat tttgcggcga
     5161 cacgctgttt tctggtgggt gtggtaggtt gtttgaaggg acagcatcac aaatgtatca
     5221 atcacttaat aagttaagtg cgttacctga cgatacattg gtatgttgtg ctcatgaata
     5281 tacgttatca aatatgaagt ttgctttgag tattcttccg cacgatttgt ccataaatga
     5341 ttattatcgt aaagttaagg agttacgggc aaaaaatcaa ataacactac ccgtaattct
     5401 gaaaaatgag cggcaaatta atgttttttt aagaacagaa gatattgatt taattaatgt
     5461 aattaatgaa gaaacattat tgcaacaacc tgaagaacgt tttgcatggt taaggtcaaa
     5521 gaaagatagg ttctgataaa actttcttgt catcggctcc gttcgccgtt atgatcggtc
     5581 gtcttttaag caactattga cacacacatg aaggcaaaag cgatattact cgcctctgtc
     5641 ctgctcgtgg gttgccagag taccggcaac gttcaacagc acgcacagag cctttctgca
     5701 gctggtcaag gggaagcagc aaagtttaca agtcaggcac gatggatgga cgatgggacg
     5761 tctatcgcgc cagatggtga cttgtgggct ttcattggcg acgagctaaa gatgggaatt
     5821 ccggaaaatg accggattcg cgaacagaaa cagaaatatt tacgcaataa gagctatctc
     5881 cacgatgtaa ctttacgggc agagccgtat atgtactgga tagccgggca agttaaaaaa
     5941 cgtaacatgc ctatggaact ggtactacta cccatagtgg agagcgcttt tgatcctcac
     6001 gcaacgtctg gcgccaatgc cgcaggcatc tggcagatca ttccgagcac ggggcgcaat
     6061 tatggtttga aacagacccg caattatgac gcgcgtcgcg atgttgttgc ttcaacaact
     6121 gccgcgctga acatgatgca gcgtctgaac aagatgtttg acggcgactg gcttctgacc
     6181 gtagcggctt ataacagcgg cgaaggtcgg gtcatgaagg caattaaaac gaacaaagcg
     6241 cgtgggaaat ccacggactt ctggtcgtta ccgttgccgc aggaaacgaa gcagtacgtg
     6301 cctaaaatgc tggcattgag tgatattctc aaaaacagca agcgttatgg cgtacgtctg
     6361 ccaacgaccg atgaaagccg tgctctggca cgtgtgcacc tgagcagccc ggttgaaatg
     6421 gcgaaggttg cagatatggc ggggatttcc gtcagcaagc tgaagacatt caacgctggc
     6481 gtgaaaggct ccacgctggg cgcaagtggt ccgcagtacg tgatggtgcc aaagaagcat
     6541 gcagatcaac tgcgtgaatc tctggcttca ggcgaaattg ctgctgtaca gtcgacgctg
     6601 gttgccgaca atacgccgct taacagccgt gtttacaccg tacgctctgg cgacacgctt
     6661 tcaagtatcg cttcacgtct cggcgtaagc accaaagatt tgcagcagtg gaacaaactg
     6721 cgcggatcta agctgaagcc aggccaaagt ttgacgattg gtgcaggcag tagcgcacag
     6781 cggttggcaa acaacagcga tagcattacg tatcgtgtgc gcaaaggcga ttcgctttca
     6841 agcattgcta aacgccacgg cgtgaacatc aaagatgtga tgcgctggaa cagcgacact
     6901 gcgaatctgc aaccaggcga caagctgacg ttgtttgtga aaaacaacaa catgccagat
     6961 tcctgacaaa ccagataata aaaaggcacc gattcccccg gtgccttttt tatttatgcc
     7021 gctttatgtg cttctaccat gatgatatca ctggtgaaag agccgtcatt ctgcaaggca
     7081 aaatacgttc tcacctctgt cgatgcgctc tgttggtaaa tgcgaatagc gtctactaac
     7141 gcttctggcg tacgcattct cgcgacccat gaagaaaatt ccagcggtaa cttatctgta
     7201 attaaattat caactatcac attggcttca ttgattaacc tcaaccactc accgctggcg
     7261 tagtttcgta cgtgagaggt atcgcgtaat gcttctaccg tctgtaacca gatgtcgcgc
     7321 actgggtgac ccggagacat tacgtccatc acaatcagcc taccaccagg tttcaatatc
     7381 cggttcactt cacgcagtgc tgcaccaaca tcatgccagt gatgggcaga ataacggctg
     7441 ataacaatat caaatgcgtt atcggcaaat ggcagacttt cggcatatcc ctggcgggtg
     7501 gtgatatttt tcagttgccg ggcttcggca gcttgtgcca cgacatccag catttgggca
     7561 gataagtcat acgccaccac cgcactcacg ttttgcgcag caacaaagct ggcatgccct
     7621 gctccgcagc ccatatcaag tacacttgca tcaggataat cagccagacg caccgccagg
     7681 cgctgtaaat ctcgtccgga tgcatgtacg gtactggtca gatattcgct ggcttgagag
     7741 ctaaactgct tttctacgtg gtcatggtgg gattgtgttg tcattgcgct gtccttttat
     7801 tgtttgagta taaaagggca gcgccaaacg ttggtctgcc ctgtggcaga cctgacatac
     7861 cttatttatc aggcttgccg ggactgaatt caacgagtag cggattgtga tcggaagcgc
     7921 gcgtaaccag tacagaagct tcgctgacgt tcagaccacg gtagaaaaca aaatcgagcg
     7981 ggcgaccaaa cgcccgacgg cgctgatcgt cggtaaaacg cacctggcgc agcgacattt
     8041 cccgcgcaaa gcgatataac gcgttcatcc ttttacggct ccaggcattg aaatctcccg
     8101 ccataatgac cgggccactg tgatgagcta tctgatcgcc aataggaagt aactgcttac
     8161 tataaacatc cacgcccaga ctgaagttga cggcgtgtat attaaccacc atcaacaggc
     8221 gggtgtcagg taatggatag accgtcacca gtgccgactt cgccagacgc aaaatgggtt
     8281 ctcgttcacg taacgggcag caatacactg gatgtgccgc cgaaagggtc attacgccag
     8341 aaggatgttg tggcagcacg aaagcgggta cctgatcggc ggcaagatag ttagcggtcg
     8401 caaactgtac caactctggc gttgtttgcg cttcctgcaa taacaccaga tgtgcgtctt
     8461 tgccgtaatt ctttaatacc gacaaccatt cagcgcgttg ctgtttgtat atgttccaca
     8521 ccaggatccg aatacgctct tcggtactta acggttctcc gggtggtaat gcctggccga
     8581 tgctcgcaaa agaccccggc ggtaagatcc tctccgcagg ttgtccggca acatagcgca
     8641 tggcataggt gttttttcgc acttttgact ttgaaacctc tattacgtca acccttccgc
     8701 actcgggagg gttctactgt tatagggatt ttagctcact ctttcaacga gcaattgtat
     8761 attgttatgt aagcaagtgc ttacaccggt cagaattttg ctcattattg agaacattaa
     8821 atcgcatgac atatcacgca tcctgatggt ttaatgacaa ataaattcaa aatatctctt
     8881 ctattttgca acaggagcaa aaatgaaagc cacgtcggaa gaactcgcca tttttgtttc
     8941 ggtcgtcgaa agcggcagct ttagccgggc agcggaacaa ttagggcaag caaactcagc
     9001 ggtaagccgg gcggtgaaaa agctggaaat gaaacttggc gttagcctgc ttaatcggac
     9061 cacgcggcaa cttagcctga cggaagaagg cgagcgttat tttcgtcgcg tacagtcaat
     9121 tttgcaggag atggcagcgg cagaatcaga aattatggag acgcgtaata caccgcgtgg
     9181 actgttacgg atcgatgccg caactccagt ggtgctgcac tttctgatgc cgttaattaa
     9241 gcctttccgt gaacgctatc cggaagtcac tttatcgcta gtctcctccg aaacgattat
     9301 taatttgatc gaaagaaaag tggatgtcgc gatacacgcc ggtacgttaa cggattccag
     9361 cttacgtgcc aggccgttat ttaacagtta tcgaaaaatt atcgcctccc ccgattatat
     9421 ttcccgctac gggaagccag aaacgatcga cgatttaaag caacatgttt gcctaggatt
     9481 cactgaaccc gcttccctca atacctggcc gatagcctgt agtgatggac aattacatga
     9541 ggtgaagtac ggtttgtcat ccaatagtgg ggaaacactg aaacagcttt gcctgagtgg
     9601 caacgggatt gcgtgtttgt ccgactacat gatcgacaga gaaatcgctc gcggagaatt
     9661 ggtggagtta atggcagata aagtgttgcc agtggaaatg ccattcagtg ccgtctatta
     9721 cagcgaccgt gcggtaagta cgcgcatccg ggcttttatc gatttcctta gcgagcatgt
     9781 aaaaacagct cccggaggag ctgtcagaga ggcttaatcc cattcaggag ccagaccttc
     9841 cgggctaacc aggcggtcgt tgcaatccag tgcggcgatc gcttttttat cttcggcatc
     9901 aagctgtaaa ttttgtgcct taagattact ttccagattt ttacgtttag tagaagaagg
     9961 aattactgag taaccttccc ccatagccca cgccagaatc acttgtgccg gagtcgcatt
    10021 gtgtttagct gcgatacgag caataacctc atctttcagg gccttaccat acgccagcgt
    10081 catataagaa gtaatatgga tgccgtgctg tttagcccag gcaaccactt tacggttttg
    10141 cagataagga gaaagttcaa tctggttagt agcgatgttt tcagcgccaa cagcagcaat
    10201 cgccttttcc atcaatggga tcgtgaagtt ggaaataccg atctcacgcg tcagcccttg
    10261 ttttttggct tccagcagcg cctgcataaa ctcttcaaca gagacttcat cgtttggtga
    10321 cggccagtgg attagcgtca gatcaacata atcggtacgc aatttttgca ggctctcttt
    10381 cagacttggg atcaatttgt ctttgctgag attttcaatc cagattttag tggtgatgta
    10441 gagttcatga cgtggcacgc cactttctgc aatcgcctga cctactgcgg cttcgttatc
    10501 atagatttgt gcggtatcaa ttgcgcgata accaagttca agcgccgttt tcacagatga
    10561 aataacaacg tcgtctttca gacggaaagt acctaaacca aatgcaggga tagccataat
    10621 atgcctcttc taatgctatt ttcgttaact gaggtgatta tgggcttcag actgttgagg
    10681 aaaaagagcg taaaatgcag aggatttttg cgattctggc aataatagat atacagacga
    10741 aaaaaaacct cgagcgttaa ctcgaggctt cttaataa
//
LOCUS       DAJVTL010000138        10744 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.140, whole genome shotgun sequence.
ACCESSION   DAJVTL010000138 DAJVTL010000000
VERSION     DAJVTL010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10744
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.140"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            209..1120
                     /locus_tag="OQQ26_003561"
     CDS             209..1120
                     /locus_tag="OQQ26_003561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858896.1"
                     /translation="MLPRIRHNNFIGAVELFVKSSHTKTHSNNFFNNIQHAFKKKDWV
                     SNYDSLLTLREFFRCATQIDKNSYQVLSSKNETVNAMDNFLISFSLKDNGADYTMTLR
                     GSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYACDILQKKQSDIPKRIKGYIRQ
                     AFGDVSFGYALLEDVVSKLKRGKFEFQIPGGGIKECNGWYIYEKIIDDNFAIVIESLG
                     FALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAVDS
                     NITKEKICEKYKSTIEAFKKEQLALPV"
     gene            complement(1210..1764)
                     /locus_tag="OQQ26_003562"
     CDS             complement(1210..1764)
                     /locus_tag="OQQ26_003562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HCS1858897.1"
                     /translation="MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDK
                     DQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
                     WAKDGALTQEEVQQVMDLLQKLLK"
     gene            2089..2295
                     /locus_tag="OQQ26_003563"
     CDS             2089..2295
                     /locus_tag="OQQ26_003563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HCS1858898.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDNGKILIPKV
                     KDKLHLSVMSEVNRQVMRLQTEMA"
     gene            complement(2357..3700)
                     /locus_tag="OQQ26_003564"
     CDS             complement(2357..3700)
                     /locus_tag="OQQ26_003564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HCS1858899.1"
                     /translation="MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINA
                     QRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSF
                     ILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANM
                     IFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTP
                     RENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA"
     gene            complement(4023..4661)
                     /gene="msrA"
                     /locus_tag="OQQ26_003565"
     CDS             complement(4023..4661)
                     /gene="msrA"
                     /locus_tag="OQQ26_003565"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HCS1858900.1"
                     /translation="MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGME
                     IAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD
                     PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAA
                     MLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA"
     gene            4867..6600
                     /gene="tamA"
                     /locus_tag="OQQ26_003566"
     CDS             4867..6600
                     /gene="tamA"
                     /locus_tag="OQQ26_003566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HCS1858901.1"
                     /translation="MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLS
                     TIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGV
                     PVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFD
                     SEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGYEY
                     ESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYST
                     DVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQILDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMI
                     SRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGT
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHG
                     LQFYIGLGPEL"
     gene            6597..10376
                     /gene="tamB"
                     /locus_tag="OQQ26_003567"
     CDS             6597..10376
                     /gene="tamB"
                     /locus_tag="OQQ26_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HCS1858902.1"
                     /translation="MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVP
                     GLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQ
                     VNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSG
                     LNWQEKTLTLKPTSLKGLLIALPKVAEVAQEEVVEPKIENPQPEEKPLGETLKDLFSR
                     PVLPEMTEVHLPLNLNIEEFKGEQLRVTGDTDITVSTMLLKVSSIDGNTKLDALDIDS
                     SQGIVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGP
                     VDMDLRAQTRLAEAGLPLNVEVNSKQIYWPFTGEKQYQADDLKLKLTGKMTDYTLSMR
                     TAVKGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTL
                     NGINTAKEIPEWPSKLNGLIKTRGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGN
                     SYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKV
                     RGTVEAPQLLADITTRGLRWQELSVAQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNI
                     NLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTFSNTRFQTPVGPW
                     SLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDLAMLK
                     PFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTL
                     NLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGGNVNIRNFNLAMINPIF
                     TRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMR
                     STLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFE
                     ATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNL
                     IVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGE
                     LLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSY
                     LLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQV
                     VVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            10379..10720
                     /locus_tag="OQQ26_003568"
     CDS             10379..10720
                     /locus_tag="OQQ26_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HCS1858903.1"
                     /translation="MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGA
                     VPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLKL
                     IESGDWLDRDK"
BASE COUNT         2803 a         2532 c         2861 g         2548 t
ORIGIN      
        1 cagatggcag aaacagtgta tttcctgatt ctgccatcct gatttatccc aacctaaaaa
       61 gttataaata aaaagagatt gtatttaaag tgcaaaaatt caattgctaa taagttacat
      121 tttaataatg agcgtttttt gatagtttac ttctataatg agatatttaa tggcgacata
      181 aaataaccaa ataaaataag gtagccatat gttacctagg atcagacaca ataattttat
      241 tggtgcggtg gagttatttg taaagtcatc gcatacaaaa acacattcaa acaatttttt
      301 taataatatt cagcatgcat ttaagaaaaa agattgggtt tcgaattatg atagcctgtt
      361 aactttgagg gagttctttc gttgcgcgac tcagattgat aaaaatagtt atcaagtgct
      421 ttcatcaaaa aatgaaactg ttaatgccat ggataatttt cttatcagtt tcagccttaa
      481 agataacggt gctgactata caatgacatt gcgaggcagt gggtttgaat acgaagaaat
      541 tcccataaca ataaatgagt ataactcatt catggatttc aaaaaccgcg agtttccgtt
      601 agaacaaaac agaagattgt atgcctgtga tattttgcag aaaaaacagt ctgacatacc
      661 aaaaaggatt aaaggttata ttcgccaggc gtttggtgac gtatctttcg gttatgcctt
      721 attggaggat gtagtaagca aattaaaacg gggtaaattt gaattccaaa taccaggcgg
      781 tggaattaaa gaatgcaatg gatggtatat ttacgaaaaa ataattgatg ataattttgc
      841 catagtcata gaatctttgg gctttgcgct taaaatctat ggaggggatg aacgttttcg
      901 taatggttcc tctgttgttt tggaggatga agattactct cttatttata attttctggt
      961 taatgcaggt tgccaacaag tcgaattagc cgaacaagtg gatgcgatag taagtgcgaa
     1021 tctggccgta gatagtaata ttaccaaaga aaagatttgc gagaaatata aatcgaccat
     1081 tgaggcgttt aaaaaagagc aactagcgtt accagtatga gttcggcgta agaactaaga
     1141 gacttaattc ccctatccca tagataacga taggggaaaa ttatttttgc agaatttatg
     1201 ttattgccat tatttgagca acttttgcag caggtccatc acttgctgca cctcttcctg
     1261 tgtgagcgcc ccgtctttgg cccattgcac gcgaccatcc ttatccagca ccactacagc
     1321 ggaactttct tcatccagct gccaggcacc gcgcgcgacg ccattgctat cgacaataaa
     1381 ctgcgaccag ggataaagct ttttattact ctccagactg ctgcgcacaa acatgccgga
     1441 acccggaatc gcgtcgtcgg tgttaacaat ggtggtggtc tggtaacgat cgtgcggtaa
     1501 cttcgctgat ttaatcgctt caatcagcgt cgcgtttttc tcttttgcag aggtgcgacc
     1561 agcaatatgt tgcagtactc tcacttttcc cactaactgc gcgctgttcc aggttttgta
     1621 gctaaactga tctttatcaa gcaccaactc gccccgatcg gtaatgccaa tcggcggcac
     1681 tcgctgaccg gtttcgaact gatgtgcgga agccatcatc ggcaacagca ggcaggtgag
     1741 tgccagaatc ttgcgtaggg tcatggtgtt tccttcttat gatatgcagg tgatccgacc
     1801 acttgggtct gagttttaat catatgtgct atttatcgaa tttcccgcaa gtgtgatgcc
     1861 agtttgcggt caagcgcaca aatcatatga aaaatgaatg cttatactga agaccgcgct
     1921 tcggtaaaaa gataattctg aataattgta acctttaggt aaaaaaagtt atacgcggtg
     1981 gaaacattgc ccggatagtc tatagtcact aagcattaaa atttgcgcct cataatagtt
     2041 gggccgattg tggcaccgca caggcgtaat actcagcagg agataacaat gaaaattttc
     2101 caacggtaca acccacttca ggtggcgaag tacgtaaaga tcctgttccg tggacggtta
     2161 tacatcaagg acgttggcgc ttttgaattt gataatggta agattcttat cccaaaagtg
     2221 aaggataagc tgcatttgtc agtgatgtcc gaagttaacc gtcaggttat gcgtctgcaa
     2281 acagagatgg cttaaccaaa gtgctatgca gtaataagac ggctcctgat tcaggagccg
     2341 ttgatgtttc tgggggttac gcgacgcttt cttctttatc tttagcgtca ggcagttttg
     2401 gcgaaagggc ggtggccttg ctgtcgatcc gggtcaccag caactggtcg atgcggtagt
     2461 tatcgatatc caccacttca aatttgtagc cagcgaattt caccgaatcg gtgcgttttg
     2521 ggatcttacg cagcataaac atcataaagc cgccgatggt ttcgtagttg cccgactgcg
     2581 ggaactcgtc aatatccagc acgcgcatga cgtcgtcaat cggggtgccg ccgtcaatca
     2641 gccatgagtt ctcatcacgg gcgacaatct gctcttccag cccctgaccg accagatcgc
     2701 ccatcagcgt ggtcatcacg tcgttgaggg taatgatccc cactaccagc gcgtactcgt
     2761 tcatgatcac cgcgaagtct tctcctgcgg ttttaaaact ttccaacgcc tctgaaaggg
     2821 ttaacgtatc cggcacaatc agcgtgttgc gaatttgtac gccgctgttc agtgccaggc
     2881 tttggttagc cagcacgcgg ttcagcaggt ctttagaatc gacatagccg atgatgtggt
     2941 caatatcttc attacagacg aggaacttag agtgcggatg ttccgccacc ttattcttca
     3001 gactttgctc atcttcgtgg agatcaaacc aaatcacgtt ttcacgcggc gtcattgacg
     3061 acggaacggt acgggattcc agctcaaaga cgttttcaat cagctcgtgt tcctgtttac
     3121 gtaacacgcc cgccagcgca ccggcttcca ctaccgcgta gatgtcatca gaagtgatgt
     3181 catctttacg taccattggc agtttgaaaa tacggaagat catgttcgcc aggccgttga
     3241 agaaccacac cagcggggtg caaacgtaca ggcagaagcg catcgggttg atgatacgca
     3301 aagccaccgc ttctggcgca atcataccga tgcgtttcgg ggttaaatcc gcaaacagga
     3361 taaacatgcc agtcactaac gagaaagaga gaataaagct cagttgctca gagagctctg
     3421 ccgacatata gcgggagaac aggctgtgaa aagctggaga aaatgccgca tcaccgacga
     3481 taccgccgag aatcgccact gcgttcagac cgatttggac cacggtaaag aacatgccgg
     3541 gattttcctg catattcaga acgcgttggg catttatatt gccttcatca gccagcagtt
     3601 taagtttgat tttgcgtgag gcggcaagcg agatctcgga catcgagaag aacgcactta
     3661 cagcgatcaa gcagagtatg actaaaatac tgtttaacat atcttatccg acctttcagg
     3721 ccagatcctc ggaaggggaa gttgattaat ttgtgtgaaa tacacattga aagccgattc
     3781 gaagaaagtg aaccggcatt ttcagtggct agtatagcgt aatgtactgt aaagtcgcca
     3841 gagggttaaa attcagactg ctgataaatg caatactgcc tgatgcgcta tgccgatcgg
     3901 gcctacgcag tccttgcaat atattgaatt tggacgattt tgtaggcctg gtaaggcgtt
     3961 tacgccgcat ccggcataaa taaagcgcac tttatcaaca atctacattt gtacccgtaa
     4021 cgctatgctt ccggtggcag acagacgcca attccgccaa ttccacagta accatacggg
     4081 tttttatgca gatattgctg gtggtcatct tcggcataat aaaacggtgt ggcgttagcg
     4141 atttccgtgg tgatgtgacg atcgtcatcg gcggcaagca tcgccgcctg aaaacgttcc
     4201 agactggcgc gagctgcggc atcctgttct ggggtcagcg gataaatcgc tgaacgatac
     4261 tgcgtgccgt ggtcattgcc ctgacgcatt ccctgggcgg gatcgtgatt ctcccaaaat
     4321 acctgtagca actgctcata gctgatgacg gaaggatcgt aaacaatgcg taccgcttcg
     4381 gcatgacccg tatcaccgga gcacacttcc cgataagtcg gatttggcgt atagcctccg
     4441 gtatagcctg cggcggtgct gtaaacgccg ggtaactgcc agaacagacg ctccacaccc
     4501 cagaaacaac ccatcgcaaa aatggcaatc tccattccgt caggtacatt ggtcattgag
     4561 tgaccgttga ccgcatgcag cgtggctacg ggcatcgggg tgttacgtcc aggcagggca
     4621 tcggcggggg aaaccagatg ctttttatca aataaactca tggtgtcgct ctcccgaaaa
     4681 tcggtcattg gggttaaggt tgtaacaaga ggcgtatttg cacacaataa ccaccgtgaa
     4741 taggtctaaa gtaaaacata agaaatattt ggggtttagt ctgcttttta atccatatta
     4801 ctggattttt gttaagccgt ttaacggcgt tccaggggca ggaaaaaagg atattcagga
     4861 gaaaatgtgc gctatatccg acagttatgc tgtgtaagct tactctgctt aagcggatct
     4921 gccgtcgccg cgaacgtccg tctacaggtc gaggggttat cgggacagct ggaaaagaac
     4981 gttcgtgcgc agctttctac gattgaaagt gatgaagtga cgccagaccg tcgctttcgc
     5041 gcacgcgtcg atgatgccat ccgcgaaggt ctgaaagcgc tgggttatta ccagccgacc
     5101 attgaatttg atctccgtcc accgccaaag aaagggcggc aggtattgat cgccaaagtc
     5161 acgccaggcg tgccggtgtt aattggcggc accgatgtgg tattgcgcgg cggcgcgcgg
     5221 accgataaag actatttgaa attgctcgat actcgcccgg ctattggcac ggtactgaac
     5281 cagggcgatt atgaaaattt caaaaagtcc ttaaccagca ttgcgttgcg taaaggttat
     5341 ttcgatagcg aatttaccaa agcgcagttg ggcattgcgc tcggcctgca taaagccttc
     5401 tgggatattg attataacag tggcgaacgt taccgctttg ggcatgtgac ctttgaagga
     5461 tcacaaatcc gcgatgaata cctgcaaaat ctggtgccgt ttaaagaggg ctatgagtac
     5521 gaatcgaaag atctggcaga actgaaccgc cgactttctg ctaccggctg gtttaactcg
     5581 gtggtggtgg ctccacaatt tgataaagcg cgcgaaacga aagtattacc attgacgggc
     5641 gtggtttcgc cgcgaacaga aaacaccatc gaaaccgggg tcggttactc tacggacgtg
     5701 ggaccgcgcg tgaaagcgac gtggaaaaaa ccgtggatga actcatacgg tcacagtctg
     5761 accaccagta ccagtatttc cgcgccggaa cagatcctcg acttcagcta taaaatgccg
     5821 ctgctgaaga atccactgga acaatattat ttggtgcagg gcggttttaa gcgcactgac
     5881 ctgaacgata ccgaatctga ctccactacg ctggtggctt ctcgctactg ggatctctcc
     5941 agcggctggc agcgtgccat taacctgcgc tggagtctcg accactttac ccagggtgaa
     6001 attaccaaca ccacgatgct gttttatcct ggggtgatga ttagccgcac gcgttctcgt
     6061 ggtggcctga tgccaacctg gggcgactcg caacgctact ctatcgacta ctccaacacg
     6121 gcctggggct cagatgtcga tttctccgtt ttccaggcac aaaacgtctg gatccgaaca
     6181 ctgtacgatc gccatcgttt tgtgacacgc ggcacgctgg gctggattga aaccggtgat
     6241 ttcgacaaag taccgccgga tctgcgtttc ttcgccgggg gcgaccgcag tattcgtggc
     6301 tacaaataca aatctatcgc tccgaaatac gccaacggtg acctgaaagg agcctcgaag
     6361 ttgataaccg gatcgctgga ataccagtac aacgtgaccg gaaaatggtg gggcgcggtg
     6421 tttgtcgata gtggcgaagc ggtaagcgat attcgccgca gcgactttaa aaccggtacc
     6481 ggggtcggcg tgcgctggga atcgccggtc gggccaatca aactcgattt tgccgtgcca
     6541 gtcgcggata aagacgaaca cgggttacag ttttacatcg gtctggggcc agaattatga
     6601 gtttatggaa aaaaatcagc ctcggcgtgg ttatcgttat cttactgttg ctgggatcgg
     6661 tggcgtttct ggtgggcacc accagcggcc tgcatcttgt atttaaagcg gcggatcgct
     6721 gggtgccagg actggatatt ggcaaggtca ccggcggctg gcgcgatctc accttgtctg
     6781 acgttcgtta tgagcagcca ggcgtggcgg taaaagcggg taatctgcat ctggcggtcg
     6841 gtcttgagtg cctgtggaac agtagcgttt gtattaatga cttggcgctg aaagacattc
     6901 aggtcaacat cgacagtaaa aaaatgcctc cttctgaaca ggttgaagaa gaggaagata
     6961 gcggtccgct ggatctctcc acgccgtatc ccatcaccct gacacgagtg gcgctggata
     7021 acgtcaacat caagattgat gacaccacgg tgtcggtgat ggacttcacc tccggcctga
     7081 actggcagga gaaaaccctg accctgaaac cgacgtcgct gaaaggactg ctgattgctc
     7141 tgccgaaagt ggcggaagtg gcgcaggaag aagtggtcga accgaaaatt gaaaatccac
     7201 agccggagga aaagccgctc ggcgaaacgc tgaaagatct cttttctcgc ccggtattgc
     7261 cggaaatgac cgaagtgcat ttgccgctta acctgaacat tgaagagttt aagggcgagc
     7321 agctgcgcgt gacgggcgac acggacatca ccgtgagcac catgctgctg aaagtgagca
     7381 gcattgacgg caatactaaa ctggacgccc tggatatcga ttccagtcaa gggatcgtca
     7441 acgccagcgg cacggcgcag ctgtcagaca actggccggt ggacatcact ctcaacagca
     7501 cactgaacgt ggagccgttg aaaggtgaaa aagtgaagct gaaagtgggc ggcgcgctgc
     7561 gcgaacagct ggagattggt gttaatcttt ccggtccggt ggatatggat ttacgcgccc
     7621 agacgcgact ggcggaagcc ggattgccgc tcaacgtgga agtgaacagc aaacagattt
     7681 actggccgtt cactggtgag aagcagtatc aggcggatga tctgaaactg aaacttaccg
     7741 gcaaaatgac cgattacacg ctctctatgc gtacggcagt gaagggacag gagatcccgc
     7801 cagccaccat tacccttgat gccaaaggta atgaacagca ggtcaatctc gacaaactca
     7861 ccgtcgcggc actggaaggg aaaactgaac tcaaggcgtt gctcgactgg cagcaggcca
     7921 ttagttggcg cggtgagcta acgcttaacg gcattaacac cgccaaagag atcccagagt
     7981 ggccgtcgaa actcaatggc ttgattaaaa cccgcggtag cctgtacggc ggcacctggc
     8041 agatggaggt gccagaactg aagctgaccg gtaacgtcaa acagaacaaa gtgaatgttg
     8101 atggcacgct gaaaggcaac agttatatgc agtggatgat cccagggctg catctggaac
     8161 tggggccaaa cagtgccgaa gtgaaaggcg agctgggggt aaaagatctt aatcttgatg
     8221 ccaccatcaa cgcgccgggg ctggataacg cgctgccagg gcttggcggt acagcgaaag
     8281 ggctggtgaa agtacgcggc acggtggaag cgccacaact actggcggat atcaccacgc
     8341 gcggcctgcg ctggcaggaa ctttccgtgg cgcaggttcg cgtggaaggc gatatcaaat
     8401 ccaccgatca gatcgccggg aaactcgacg tacgcgttga gcaaatttcg cagccggatg
     8461 tcaatatcaa cctcgtcacc ctgaatgcca aaggcagcga aaagcagcac gagctacagt
     8521 tgcggattca gggcgaaccg gtttccgggc agcttaatct ggcaggaagt tttgatcgca
     8581 aagaagaacg ctggaaggga acttttagca atacccgctt ccagacgccg gtcggcccgt
     8641 ggtcgctgac ccgcgatatt gcgctggatt accgcaataa ggagcaaaaa atcagcatcg
     8701 ggccacactg ctggcttaac ccgaatgcgg aactgtgcgt gccgcaaact atcgatgcgg
     8761 gggccgaagg gcgtgcggtg gtgaatctca accgcttcga cctcgccatg ctgaaaccgt
     8821 ttatgccaga aaccactcag gccagcggta tcttcacggg taaagcggat gttgcctggg
     8881 acaccacgaa agaggggctg ccgcagggca gtatcaccct ttcggggcgt aacgtgcagg
     8941 taacgcaaac cgtcaacgat gcggcgctgc cggtggcgtt tcagacactg aatctgacgg
     9001 cggaattgcg taacaaccgt gccgaattgg gctggaccat ccgcctgacc aataacggcc
     9061 agtttgatgg acaggtgcag gtgaccgatc cgcaaggccg ccgtaatctt ggtggcaacg
     9121 tcaatatccg taacttcaac cttgcgatga taaaccccat ctttacccgt ggggaaaaag
     9181 cagcggggat ggtgagtgcc aacttgcgtc tgggtggtga tgtgcaaagc ccgcagttgt
     9241 ttggtcagct tcaggttacg ggtgtggata tcgacggcaa ctttatgccg tttgatatgc
     9301 agccgagcca gcttgcggtc aactttaacg gtatgcgctc gacgcttgcc ggtacagtac
     9361 ggacccagca gggtgaaatc tacctgaacg gtgatgccga ctggagccaa attgaaaact
     9421 ggcgggcacg agtaacggcg aaaggtagta aagtgcggat caccgtgccg ccgatggtac
     9481 gaatggatgt atcgccagat gttgtattcg aggctacacc aaacctgttt accctcgatg
     9541 gtcgcgtgga tgttccgtgg gcgcgcatcg tggtgcacga tctgccggaa agcgcagtag
     9601 gcgtctccag cgatgtggtg atgcttaacg ataacctgca accggaagag ccgaaaacgg
     9661 cgtcgattcc gattaacagt aacctgattg tccacgttgg caacaatgtg cgcattgacg
     9721 cctttggcct gaaagcgcgg ctgacgggcg atcttaacgt cgtacaggac aaacaagggc
     9781 tgggtctgaa cgggcagatc aacatccctg aagggcgctt ccatgcctat ggtcaggatc
     9841 tgattgtgcg taagggggag ttactgttct ctggtccgcc ggatcaaccg tatcttaata
     9901 ttgaagctat tcgtaacccg gatgctacag aagacgacgt aatcgccgga gttcgcgtca
     9961 ctggtctggc ggacgaaccg aaagcggaga tcttctctga cccggcgatg tcgcaacaag
    10021 ctgcattgtc ttatttgcta cgtggacaag ggctggagag cgatcagagc gacagcgcgg
    10081 caatgacctc gatgctgatt ggtctggggg ttgcgcaaag tggccagatt gtgggtaaaa
    10141 tcggcgagac gtttggcgta agcaatttag cgctcgacac ccagggagta ggcgactcct
    10201 cccaggtagt ggtcagcggc tatgtattgc caggtctgca agtgaaatac ggcgtgggta
    10261 tatttgactc tatagcaaca ctcacgttac gttatcgcct gatgcctaag ctatatctgg
    10321 aagccgtgtc tggtgtagac caggcactgg atttgctcta tcagttcgag ttttagcaat
    10381 gcgaatattt gtctacggca gtttacgcca caaacaaggc aacagtcact ggatgaccaa
    10441 tgcccagtta ctgggcgatt tcagtatcga taactaccag ttgtatagcc tgggccacta
    10501 tccaggcgca gttccgggga acggaacggt acacggtgaa gtttatcgta ttgacaacgc
    10561 cacgctggcc gaacttgatg ccttgcgcac caggggcggt gaatacgcgc gccagttgat
    10621 tcagacgccg tacgggagtg catggatgta cgtttatcaa cgacccgtcg atggattaaa
    10681 gctaattgaa agcggcgact ggttagacag ggataagtaa ccatatgcat acgccacctt
    10741 cggg
//
LOCUS       DAJVTL010000139        10439 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.141, whole genome shotgun sequence.
ACCESSION   DAJVTL010000139 DAJVTL010000000
VERSION     DAJVTL010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10439)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10439)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10439
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.141"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..304
                     /locus_tag="OQQ26_003569"
     CDS             <1..304
                     /locus_tag="OQQ26_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310137.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1858904.1"
                     /translation="IPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKN
                     GSIVAENGQVYLTGLPQSGKLQVSWGNDKNSNCIVDYKLPEVSPGTLLNQQTAICR"
     gene            318..848
                     /locus_tag="OQQ26_003570"
     CDS             318..848
                     /locus_tag="OQQ26_003570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1858905.1"
                     /translation="MKYNNVIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDS
                     LNFTVDLQKNSARQFPTTGSTSPTVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLK
                     LDEGSNTASGLGIEILDGNMRPVKLNDFHAGMQWIPLVPEQNNILPYSARLKSTQKSV
                     NPGLVRASATFTLEFQ"
     gene            861..1340
                     /locus_tag="OQQ26_003571"
     CDS             861..1340
                     /locus_tag="OQQ26_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HCS1858906.1"
                     /translation="MKRLHKRFLLATFCALFTATLQAADVTITVNGRVVAKPCTIQTK
                     EANVNLGDLYTRNLQQPGSASGWHNITLSLTDCPAETSAVTAIVTGSTDNTGYYKNEG
                     TAENIQIELRDDQDATLKNGDSKTVIVDEITRNAQFPLKARAITVNGNASQGTIEVR"
     gene            1364..2272
                     /locus_tag="OQQ26_003572"
                     /pseudo
     CDS             1364..2272
                     /locus_tag="OQQ26_003572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001736301.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
     gene            2300..2611
                     /locus_tag="OQQ26_003573"
     CDS             2300..2611
                     /locus_tag="OQQ26_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HCS1858907.1"
                     /translation="MFEDEELVMELLVNAGQARSDAMEAIRCAGQKDWQGATQLMASS
                     ESACLQAHKIQTALISQDEGCGKIRVNLILVHAQDHLMNAILCQDLAREIISLRKELH
                     A"
     gene            2667..4340
                     /locus_tag="OQQ26_003574"
     CDS             2667..4340
                     /locus_tag="OQQ26_003574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HCS1858908.1"
                     /translation="MNIKTLNVSLLSFSIITALIPLNAMATKLTIEQRLELLENELSK
                     NKQELKATQNELGVYKSRLSTLQNSITENKYKSASLAEISATSPVADNIKNENGEQNS
                     SAAAHTINGSQQVAVIESKGDKTTIESVTLKDISKYIKDDIGFSYQGYFRSGWGTGNH
                     GSPQTYAAGSLGRFGNEMSGWFDLTLNQRVYNQDGKTANAVVTYDGNVGEQYNDAWFG
                     DSANENIMQFSDIYLTTRGFLPFAPEADFWVGKHKLPQYEIQMLDWKTLTTDVAAGVG
                     IENWALRVGLFDMSLSRDDVDVYSRDFTRTSQMNTNSVDVRYRNIPLWDDATLSLMAK
                     YSAPNKTDQQQDNENDDSYFEMKYSWMLTSVLRQNLQRDTFNEFTLQVANNSYASSFA
                     SFSDASNTMAHGRYYYGDHTNGIAWRLISQGEMYLTDNIIMANALVYSHGEDVYSYES
                     GAHSDFDSIRTVIRPAWVWNTWNQTGLELGWFKQQNKTQQGVTLNESAYKTTLWHALK
                     VGESILGSRPEIRFYGTYINILDNELSNFKFNENSKDEFIAGIQAEVWW"
     gene            4365..5804
                     /locus_tag="OQQ26_003575"
     CDS             4365..5804
                     /locus_tag="OQQ26_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000012594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HCS1858909.1"
                     /translation="MSGFKKGFLWGGAVAAHQLEGGWNEGGKGISIADVMTAGAHGVP
                     REVTEGVIDGLNYPNHEAIDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEP
                     NEEGLQFYDDLFDECLKQGMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTV
                     FTRYKEKVKYWMTFNEINNQVNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYEL
                     VASALAVQTGKSINPEFNIGCMIAMCPIYPLTCAPNDMMMATKAMHRRYWFTDVHARG
                     YYPQHMLNYFARKGFNLDITPEDNAILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVE
                     PRDLVSNPYIDTSEWGWQIDPAGLRYSLNWFWDHFQLPLFIVENGFGAVDQRQADGTV
                     NDHYRIDYFASHIREMKKAVVEDGVDLIGYTPWGCIDLVSAGTGEMKKRYGMIYVDKD
                     NEGKGTLERIRKASFYWYRDLIANNGENI"
     gene            complement(5861..6079)
                     /gene="marB"
                     /locus_tag="OQQ26_003576"
     CDS             complement(5861..6079)
                     /gene="marB"
                     /locus_tag="OQQ26_003576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HCS1858910.1"
                     /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPLSQEQ
                     PPFDLNHMGTGSDKSDALGVPYYNQHAM"
     gene            complement(6111..6494)
                     /gene="marA"
                     /locus_tag="OQQ26_003577"
     CDS             complement(6111..6494)
                     /gene="marA"
                     /locus_tag="OQQ26_003577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707445.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HCS1858911.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRNRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRMTNMQGESRFLHPLNHYNS"
     gene            complement(6515..6949)
                     /gene="marR"
                     /locus_tag="OQQ26_003578"
     CDS             complement(6515..6949)
                     /gene="marR"
                     /locus_tag="OQQ26_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HCS1858912.1"
                     /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK
                     VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT
                     GGAAICEQCHQLVGQDLHQELTKNLTADEVATLKYLLKKVLP"
     gene            7161..7826
                     /gene="marC"
                     /locus_tag="OQQ26_003579"
     CDS             7161..7826
                     /gene="marC"
                     /locus_tag="OQQ26_003579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter MarC"
                     /protein_id="HCS1858913.1"
                     /translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
                     EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
                     PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
                     TYH"
     gene            complement(7851..9041)
                     /gene="ydeA"
                     /locus_tag="OQQ26_003580"
     CDS             complement(7851..9041)
                     /gene="ydeA"
                     /locus_tag="OQQ26_003580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose MFS transporter"
                     /protein_id="HCS1858914.1"
                     /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH
                     MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT
                     VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV
                     GQYFGWRMTFFAIGIGALVTLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT
                     VVVVTAHYTAYSYIEPFVQNITGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL
                     VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE
                     EQTQ"
     gene            complement(9191..10302)
                     /gene="yneK"
                     /locus_tag="OQQ26_003581"
                     /pseudo
     CDS             complement(9191..10302)
                     /gene="yneK"
                     /locus_tag="OQQ26_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707449.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
BASE COUNT         2900 a         2232 c         2478 g         2829 t
ORIGIN      
        1 catcccaact cacggtgcta ttgccagagc aacatttaat gcacaaatcg gcgggaaagt
       61 attaatgacg ttgaagtacg gtaataaaag cgttccattc ggtgcaattg tcacacacgg
      121 agagaataaa aatggcagca ttgtcgcgga aaacggtcag gtttatctga ctggacttcc
      181 acagtcaggg aaattacagg tttcatgggg caatgataaa aactcaaact gtattgtcga
      241 ttacaagctt cctgaagtct ctcctggaac cttgctgaac cagcagacag caatctgtcg
      301 ctaaggaaca atagattatg aaatacaata acgttatttt cctcggttta tgtctggggt
      361 taaccaccta ttctgcttta tccgcagata gcgttattaa aattagcggg cgcgtcctcg
      421 attatggctg cacagtctca tcggattcgc ttaattttac cgtagatctc caaaaaaaca
      481 gtgccagaca atttccaacg accggtagca caagtccaac cgtccctttt cagattacat
      541 taagtgaatg cagcaaaggg acaacggggg ttcgggttgc atttaacggt attgaggatg
      601 cagaaaataa tactctgttg aaactggatg aaggaagcaa tacggcctcc ggtttgggta
      661 tagaaatact ggacggaaat atgcgtccgg tgaaactgaa tgactttcat gccgggatgc
      721 agtggatccc actggtacca gaacagaaca atattttgcc ttactccgct cgtctgaagt
      781 caactcagaa gtccgtcaat ccgggactgg tgagggcttc ggcaaccttt acccttgaat
      841 ttcaataatc agagtcagat atgaaaagac ttcacaagag gttcctgtta gctacgtttt
      901 gcgcgttatt cacagcaact ctccaggccg ccgatgtcac tatcactgtt aatggtcggg
      961 tagtcgctaa accctgcact attcaaacca aagaagctaa cgttaatctc ggggatcttt
     1021 atacgcgcaa tctgcaacaa cctggttctg catctggctg gcacaatatt actttgtcat
     1081 taaccgattg tccggctgaa acaagtgcag tgacggcaat cgtgacaggt tcaactgaca
     1141 atacgggtta ttacaaaaat gaaggtactg ccgaaaatat tcagatagag ctgagggatg
     1201 accaggatgc gacgttaaaa aatggcgata gcaaaacggt tattgttgat gagatcactc
     1261 gtaatgcaca gtttccactt aaggcaagag ctatcacggt gaatggaaac gcaagccagg
     1321 gaacgatcga ggtgaggtag cctgagttta acggatactc ctattcctga cgaccaaata
     1381 tctcggtgcg caagggttgt ttgttgctgt tatcgttgca ttgatcacca gtgaaatatt
     1441 ttgtcgctta gctcgaaacc caaaaatcac cataacgatg ccggcagctg taccgcctgc
     1501 ggtagcgcgt tcatttaaag ttttattgcc aatatttttt gtcatggtgt tcttttccgc
     1561 acttaattat tgcctgacac tgatatcccc ggaaggatta aacgatctca tttacacatt
     1621 aatccagacg ccgctcaaac atatgggaac gaatatcttt gcggtaatta tcctgggggc
     1681 tgtgggtaat ttcctctggg tgctggggat ccacggacct aataccacgt cggcaattcg
     1741 agaaactgtt ttttctgagg ctaatctgga gaatctctcc tgggccgctc aacacggcac
     1801 tacctggggc gcgccatatc cgattacctg gacttctatt aatgatgcat tcgccaactg
     1861 cggcggttca ggtatgacgt tggggttatt gttggctatt tttatcgctt ctaagcgtgc
     1921 ggaataccgt gatctggcaa aaatgtcatt tatccccggt attttcaata tcaatgaacc
     1981 gataatgttt ggccttccta ttgtacttaa ccccatcatg atggtgccgt ttattatggt
     2041 tcccattgtt aactgtgcca ttggttactt ctttgtttcg atggaaatta ttccaccggt
     2101 tgcttatgcc gtgccctgga ctacgcccgg acctttaatt gctttcctcg gaaccggggg
     2161 aaactggctg gctttactgg ttggtttttt atgtttaggt gtggcgacaa tgatctattt
     2221 accttttgtt attgccgcca acaaagtcaa taacatgaca actaacggat aattccattt
     2281 acccaggaag gagattgtga tgtttgaaga tgaagaactt gttatggagt tactggtcaa
     2341 cgcggggcag gcacgttctg acgcgatgga agccatacgt tgtgccgggc aaaaagactg
     2401 gcagggcgca actcagttaa tggccagttc tgaatctgcc tgtcttcagg cacataagat
     2461 tcagaccgca ttaattagtc aggatgaagg ctgtggcaaa ataagagtta atttaattct
     2521 ggttcatgca caggatcatt tgatgaatgc aatattatgc caggatttag ccagggaaat
     2581 tatttcatta agaaaagagc tccatgcctg attttttcct ccagtgcgat agctggagga
     2641 aattattata ctcttaagga taagtcatga atataaagac gcttaacgtc agccttttgt
     2701 ctttttctat tattacagca ttgattccat tgaacgcgat ggcaacaaaa ttaaccatag
     2761 agcagcgcct tgaattgctt gaaaatgaat tgtcgaaaaa taaacaagag ctgaaagcaa
     2821 cacagaatga actgggagta tataaatccc gactttcgac cttacaaaat agcatcacgg
     2881 aaaacaaata taaatcagcc tcgcttgctg aaatatcagc gacatctccc gtcgctgata
     2941 acatcaaaaa tgaaaacggt gaacagaact cgtctgccgc agcgcatact ataaatggat
     3001 cgcagcaagt tgccgttatt gaaagtaaag gcgacaaaac cactatcgaa agcgtgaccc
     3061 tgaaagatat cagtaaatat ataaaggatg atattgggtt cagctatcag gggtactttc
     3121 gctcaggctg gggtaccggt aatcacggct caccacaaac ttatgcagcg ggttctctgg
     3181 gacgttttgg taacgagatg agcggttggt ttgacctgac cttaaatcag cgtgtctata
     3241 atcaggacgg taaaacggca aatgcggtcg ttacctatga tggcaacgtg ggtgagcagt
     3301 ataacgatgc ttggtttggt gacagtgcca atgaaaatat catgcagttc agcgatattt
     3361 acctgacaac gcgaggtttt ttacccttcg caccagaggc agacttctgg gtcggcaaac
     3421 ataaactccc gcaatatgag atccagatgc tggactggaa aaccttaacc acggatgtcg
     3481 ccgcgggtgt ggggattgaa aactgggcac ttcgtgtagg gctgtttgat atgtccttaa
     3541 gccgtgatga tgtcgatgtt tactctcgtg attttacgcg taccagccag atgaatacca
     3601 attctgtgga tgttcgttat cgcaatatcc cgttatggga tgatgcgaca ttatcattaa
     3661 tggctaaata ttccgcacct aataaaacgg atcaacaaca agataatgaa aatgacgaca
     3721 gttattttga aatgaaatat agctggatgc tgacttctgt tttacggcaa aacctgcaac
     3781 gcgatacgtt taatgaattt acgttacagg ttgccaataa ttcctatgcc agcagttttg
     3841 ccagtttctc agatgccagt aatacgatgg cgcacggtcg ctattactat ggtgaccata
     3901 ccaatgggat cgcctggcgt ttaatctctc agggcgagat gtatcttact gacaatatta
     3961 ttatggctaa cgcgcttgtc tattctcacg gcgaagatgt ttatagttat gaaagtggcg
     4021 ctcatagtga ttttgacagt attcgcactg taataagacc ggcctgggtc tggaatacat
     4081 ggaatcagac ggggcttgaa ttaggctggt ttaagcaaca gaacaaaact cagcagggtg
     4141 taacactaaa tgaatcggct tataaaacga cactctggca tgcattgaaa gtaggtgaaa
     4201 gcattttagg ttcacgacca gaaattcgtt tctatggaac gtatatcaat attctggata
     4261 acgaattatc gaattttaag tttaatgaga acagcaaaga cgagtttata gccggcatcc
     4321 aggcggaagt ctggtggtaa tctattttag ttaaggagtt gtgtatgtca ggatttaaaa
     4381 aaggtttttt atggggcggc gcggtagccg cgcatcagtt ggaaggtggc tggaatgaag
     4441 gaggaaaagg catcagtatc gctgatgtga tgactgctgg cgctcatggg gtgccgcgtg
     4501 aagtgacaga aggcgttatc gacgggctta attatcccaa tcatgaagca attgattttt
     4561 atcatcgcta taaaacagat attcagttat ttgccgagat gggattcaaa tgctttcgaa
     4621 cttccattgc ctggacacga atctttccgc aaggtgacga acaggagcca aatgaagagg
     4681 gtttacaatt ttatgatgat ctgttcgatg aatgcctgaa gcaaggaatg gaacctgtgg
     4741 tgacgctttc gcattttgag atgccttatc atctggtgac aaaatatggt ggctggcgaa
     4801 accgtaaact gatcgacttt tttatccgct tcgcatcaac ggtcttcacg cgctataaag
     4861 aaaaagtaaa gtactggatg acgtttaacg aaatcaataa tcaggtgaat ttcagcgaaa
     4921 gcctgtgtcc atttactaat tccggtatct tgtattcgcc agaggaagat atcaatgagc
     4981 gcgaacaaat aatgtaccag gcggtacatt acgagttagt tgccagtgcc ctggcggtac
     5041 agactggaaa atcgatcaat cctgaattta acattggctg tatgatcgcc atgtgtccca
     5101 tctatcctct gacgtgtgca cccaacgata tgatgatggc cacgaaagca atgcatcgtc
     5161 gttactggtt tactgatgtt catgctcgtg gatattatcc gcaacatatg ctgaattact
     5221 ttgccaggaa aggatttaac ctcgatatca caccagaaga taacgcgatt cttgccagtg
     5281 gttgtgtcga ctttatcggt tttagctact acatgtcttt tacgacacaa ttttcgcccg
     5341 ataacccgca actggattat gttgaaccac gagatttggt cagcaaccct tatatcgata
     5401 catccgaatg gggatggcaa attgatccgg cagggctacg ttattcactc aactggttct
     5461 gggatcattt ccagttgccg ctgtttattg tcgaaaatgg atttggtgcg gttgaccaga
     5521 gacaagctga cggcacggtg aacgatcact atcgcattga ttactttgct tcccatattc
     5581 gggaaatgaa aaaagccgta gtcgaagatg gtgttgactt aattggctac accccgtggg
     5641 gctgcattga cctggtttct gccggaacag gggaaatgaa aaagcgctac ggaatgattt
     5701 atgtcgataa agacaacgaa gggaagggaa cgctggaacg gatacgtaaa gcgtcgtttt
     5761 actggtatcg ggatctcatc gccaacaatg gcgaaaatat ttgagacttc aggaagatat
     5821 tacggagatg tcaggctctg taatcagagc ctgacaataa ctacatagcg tgttgattat
     5881 aatagggcac gccgagcgca tccgacttat cactgccagt acccatgtga tttaaatcaa
     5941 acggtggttg ttcctgcgat aggggaacaa ccacgacatt ggcacaagaa gtaacaactg
     6001 gctgcgtggt ttgttccgca acgccctgcg cggaaaagag aataagcgca gctgctattg
     6061 cggatgaaag tggtttcatg attgcctcag tgacgttgtc acgttatcaa ctagctgttg
     6121 taatgattta atggatgcaa aaagcgcgat tcgccctgca tattggtcat ccggtattta
     6181 tgcggcggaa catcaaagta atttttgaag gttcgggtca gagtttgttg tgactcgaag
     6241 ccatatcgtt ctgccagata gagtatcggc tcgttacttt ccttcagctt ttgcgcgatt
     6301 tccgtcatct tacggttgcg gatgtattgg cctaatgaat gaccggtttc ttttttaaac
     6361 atccgttgca ggtgccattt ggagtaaccc gaacgctctg acactttctc cagtgacagt
     6421 ggcgattcca ggttgtcctc gatccagtcc aaaatgctat gaatggtaat agcgtcagta
     6481 ttgcgtctgg acatcgtcat acctcttttt ttgtttacgg caggactttc ttaagcaaat
     6541 acttaagtgt tgccacttcg tccgccgtca ggttttttgt taattcttgg tgcaggtcct
     6601 ggccaactaa ttgatggcat tgttcacata ttgccgcgcc gccggtggta agttttacca
     6661 gtacgccgcg cttgtcattc gggttcggca acctttccac ccagccttta cagaccaggc
     6721 gatccagcat acgggtcagt gctcccaggt cgaccgacaa tacctttttc agttcaaccg
     6781 gagtaataca cgccgcgcag cggatagagc agagcacctt aaactgtgcc gcggtaatat
     6841 ccagcggaga cagatactcg ttaagcaggc gatctttctt ctgattaacc atatggatta
     6901 agcgacccaa tggaataatt tcattgaaca gatcgctggt acttttcaca ttagttgccc
     6961 tggcaagtaa ttagttacag gggataatat tgcccaggca agtataagtc aaatgaatga
     7021 attgaccgat gccacgtttt gctaaatcgg ttcaagtttt gttcaatgcg atgcaaggct
     7081 agctaaagag tgacacttta tccttgttta ccccttatac ttttcgctga taacccagat
     7141 acacaggata acaaccacca atgttagatt tgtttaaagc aattggcctg gggctggtgg
     7201 tgttgctgcc gttagctaac ccattaacaa ctgtcgcgct atttcttggc ctggcaggca
     7261 acatgaacag tgccgaacgt aatcgtcagt cgttgatggc ctcggtgtac gtatttgcca
     7321 tcatgatggt ggcgtattac gccgggcaac tggtgatgga tacatttggc atttcgattc
     7381 ccggtctgcg aattgcaggc ggcttaatcg tcgcgtttat cggttttcgg atgctttttc
     7441 cgcaacagaa agcgattgat tcaccggagg cgaaaagcaa gtcggaagag ctggaagatg
     7501 aacccagtgc caatattgcc tttgtaccac tggcaatgcc aagtaccgcc ggtccgggaa
     7561 ccatagcgat gattattagc tcggcgtcca cagtgcgtca gagttcaacc ttcgctgatt
     7621 gggtactgat ggttgcgccg ccgctgatct ttttcctggt ggcggttatt ttgtggggga
     7681 gcctacgcag ctccggcgca attatgcggc tggtgggcaa gggtggcatt gaagcgatct
     7741 cccgtctgat gggattcctg ctggtatgta tgggtgtgca gtttattatt aacggcatcc
     7801 tggaaatcat taaaacgtat cattaaaaaa ggcccgaatg ggcctttcaa ctattgcgtc
     7861 tgttcttcga gtgtcactgg ccagcggcga aatataatga ttgaccatat taacgcggca
     7921 aaagcaggca ccgcgcccac ataaccaatc atcgacattg accagtgcag actcacctga
     7981 ttacctacca acgcacccgc cccgattcca atattaaata tcccggagaa tagcgccatc
     8041 gcgacgtcgg tggcatctgg tgccagcgcc agcactttaa cctgcatacc aagcccgatg
     8101 atcatcatcg cgatccccca gaaaatactc agcaccccga ggtgtatttc actgttcgcc
     8161 gcaggtagca gcagtgccag gcacaccagc aacagcgcaa ttgccgtact taccaacgca
     8221 gacgcatact gattacccag tttaccgaaa atcacactgc caataatgcc cgcaccaccg
     8281 agtaataaca gtaatgccgt agcaaagttg gcgctgaatc ccgtaatgtt ttgcacaaaa
     8341 ggctcaatat agctgtatgc cgtgtaatgg gcggtgacaa ccaccacagt taacaaataa
     8401 atgctcatca atgccgggcg gcggaacaat agcgggaggc ttttcaatga accggaatgc
     8461 tcactaggca gtaagggaag taacttaatc aggcacaaaa gggtaacaag cgccccgata
     8521 ccaatcgcga agaaggtcat tcgccagccg aaatactgcc ccacaatgcg cccgagaggt
     8581 aaacctaata ccattgccag tgctgtaccg gtggcaatta aactcaatgc ctgtgctcgc
     8641 ttcccggccg gagccatacg gatcgccaga gacgccgtaa tcgaccagaa aatcgcatgt
     8701 gcaaaagcca caccaatgcg actgatcacc agaacggtaa agctccacga taaaaatgac
     8761 agtacgtggc tggcaataaa caccacaaac aggcagatca gtaatttgcg ccgttcaacc
     8821 tggctggtca ttaacataaa aggcaatgac attagcgcca ctacccatgc ataaatggtc
     8881 aacataatgc cgacctgagc ggtttgcatg tgaaaacttt gcgcaatgtc agagagcagg
     8941 ccaacaggga caaattcggt ggtgttgaag atgaaggcgg cgactgccag cgtaacgacc
     9001 cgtagccacg ccactttgcg ggaaacagtg tttgttgtca taacagatta tcgggtgagt
     9061 tgcgaaaaag tgatgaaatg atcttaaaac ggttaatgat gtgaatacaa tgcatttgtg
     9121 atctggatcg cgttttccgt ttctctgacg ctgattctgt tccgcgtcag agagtcggta
     9181 acatcacggt ttaatgacgt tcagggaggt ctggcgtttt ggaggttgcg ggtataggtg
     9241 gtctgacagg ggagcgaggc ctgtttttca ccaggtcttc gtgagtaact tttggcggcg
     9301 tttcattttt tacaaaaagt ttgagaggcc tgcgcgccat atgtttgata attttatcat
     9361 cacttaatga tgctggcatc aacacgtcat tcaaatcact ttcattggga ttcataaatt
     9421 ggtgatagtg caataacata ttggcgaaaa ataaaaacaa gtcctgaaaa tgaggagatt
     9481 cttgttctgc taaaagggat aaaaagcaga tgcagacttc gggtagtaca tgtttgttag
     9541 aacctaatga atccatcagg ctttgcaata aatcctcttt taattcgctg tccgttatgt
     9601 cgagaatggc ggtgatcaag ttaggatctt tattgacgaa ccatctgtga acctcagagt
     9661 tattccataa tcgggggagt atgacaaaat taccgcgaga gataaaattc aggacaagca
     9721 aatcaaactg gcgtaagtaa tctgcagcgg tatggtgatc cggaggcagg ggttcaatat
     9781 gtggtgtatg cgctcttttg atggggacgc caaggttgat cattggaaat tgttcaataa
     9841 aatcattcat aaacagaaag agcacacgct cgacgccggt ctgaaatacg cgccccatag
     9901 tgacaggctt tgggttggga gcgcaaaaaa tattaatttc tccatcatgg cgaaaattat
     9961 ctaaataggg cttaaattta ttgctacctg aaattcaata ttttctttgt gtcttccatt
    10021 cttgacggga taagtgagtt taaactgaac cttttcattg tatagtgtgt cgtcaccccg
    10081 aaaagaagtc ctctgaatat atgataagtt atcaaggttg ttaaatatct tttttgtggc
    10141 tgagttggtg tttaaagacg tgcgccactc ttcatcacat attatggtac tgagtgcatc
    10201 aataaaatcc tttaaaactt cttttacttg aggtgcaata ttacgagcgg gaaaatcatc
    10261 aggaagagat atgtaattgc tgatgcttac tggcgtaacc atatttgccc catatagtca
    10321 taagtcatcg gaacatcact atatagggca tttgagctgc aagaactatc aaaaatagct
    10381 cattggtaac cctgttttgc cgagtcaggc acatccagta gttgaataaa tgcctcaag
//
LOCUS       DAJVTL010000140        10430 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.142, whole genome shotgun sequence.
ACCESSION   DAJVTL010000140 DAJVTL010000000
VERSION     DAJVTL010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10430
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.142"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            230..1729
                     /gene="ansP"
                     /locus_tag="OQQ26_003582"
     CDS             230..1729
                     /gene="ansP"
                     /locus_tag="OQQ26_003582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HCS1858915.1"
                     /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIEMVGTTAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA
                     MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS"
     gene            complement(1842..2903)
                     /locus_tag="OQQ26_003583"
     CDS             complement(1842..2903)
                     /locus_tag="OQQ26_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HCS1858916.1"
                     /translation="MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAY
                     EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT
                     LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
                     GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKI
                     LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA
                     VLFNSARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ
                     KSTKQQEATQPDDVIRIAL"
     gene            3145..5247
                     /locus_tag="OQQ26_003584"
     CDS             3145..5247
                     /locus_tag="OQQ26_003584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HCS1858917.1"
                     /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP
                     AAVSVVDGEEMRLATPRINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR
                     GIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ
                     QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQK
                     NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTI
                     KQTQAGLRYERSLSAQDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ
                     GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGVPEYGQKGELRRDERN
                     LMWNVDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA
                     GSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR
                     IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA
                     SWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA
                     DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE
                     PSPGRNYCVSMNIAWRFE"
     gene            complement(5283..5948)
                     /gene="mcbR"
                     /locus_tag="OQQ26_003585"
     CDS             complement(5283..5948)
                     /gene="mcbR"
                     /locus_tag="OQQ26_003585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415967.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid/biofilm transcriptional regulator
                     McbR"
                     /protein_id="HCS1858918.1"
                     /translation="MPGTGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQL
                     GMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQLDEINRICYELELMAVALAVE
                     NLTPQDLAELQELLEKLQQAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWV
                     RMGPGLHYLYEAINPAELREHIENNHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQ
                     YNR"
     gene            complement(6146..7183)
                     /gene="curA"
                     /locus_tag="OQQ26_003586"
     CDS             complement(6146..7183)
                     /gene="curA"
                     /locus_tag="OQQ26_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415966.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent curcumin/dihydrocurcumin
                     reductase"
                     /protein_id="HCS1858919.1"
                     /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVVTPGEGQVLLR
                     TVYLSLDPYMRGRMSDEPSYSPPVDIGGVMIGGTVSRVVESNHPDYQPGDWVLGYSGW
                     QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPSFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHADDFAEQLAKACPKG
                     IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNSTELPPGPDRLPLLMATVLKKR
                     IRLQGFIIAQNYGHRIHEFQKEMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNF
                     GKVVIRVAGDD"
     gene            7364..7882
                     /gene="mddA"
                     /locus_tag="OQQ26_003587"
     CDS             7364..7882
                     /gene="mddA"
                     /locus_tag="OQQ26_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HCS1858920.1"
                     /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
                     ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
                     RLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQL
                     QLDERTEPDAIG"
     gene            7879..8328
                     /locus_tag="OQQ26_003588"
     CDS             7879..8328
                     /locus_tag="OQQ26_003588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HCS1858921.1"
                     /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV
                     GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYRNVGAATTIAV
                     LVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF"
     gene            complement(8329..8562)
                     /locus_tag="OQQ26_003589"
     CDS             complement(8329..8562)
                     /locus_tag="OQQ26_003589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcY family protein"
                     /protein_id="HCS1858922.1"
                     /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
                     QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
     gene            complement(8648..8821)
                     /gene="ortT"
                     /locus_tag="OQQ26_003590"
     CDS             complement(8648..8821)
                     /gene="ortT"
                     /locus_tag="OQQ26_003590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orphan toxin OrtT"
                     /protein_id="HCS1858923.1"
                     /translation="MSLYQHRLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW
                     PMSFPVALLFSLF"
     gene            9016..9111
                     /gene="yncL"
                     /locus_tag="OQQ26_003591"
     CDS             9016..9111
                     /gene="yncL"
                     /locus_tag="OQQ26_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HCS1858924.1"
                     /translation="MNVSSRTVVLINVFAAVGLFTLISMRFGWFI"
     gene            complement(9513..10322)
                     /locus_tag="OQQ26_003592"
     CDS             complement(9513..10322)
                     /locus_tag="OQQ26_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CatB-related O-acetyltransferase"
                     /protein_id="HCS1858925.1"
                     /translation="MKVQLYKFTEDKNKTLTFRWTKKHFEFCMDNKIFLNHKGKKSYK
                     ERNLFLFSKGDKITIEDNVIAEEYSTMPVKNFSSVGAFSFPTCHFSGNIRIGRFCSIA
                     SNVKIMGGNHPLNRFTTHMMTYNGEFDKFAMSEFERSWTLKPFITKPENPIIGNDVWI
                     GNDVVLKGGIAIGDGAVIAANSVVTKDVPPYAIVAGVPAKIIRFRFDSNVIDELLRIK
                     WWNYNYSDLPDNNKCDDISYFVEEMNRLISNGNIQERDYKKFNLSEVFRGL"
BASE COUNT         2571 a         2497 c         2454 g         2908 t
ORIGIN      
        1 tgcacacagg ttaaccagca aaagtatttg tcattttttc gtcagttgta tgaatcccct
       61 tcaggattgt aaggggatgt tttgcatcgt ttatcgataa cgggtaggat gctgcgccga
      121 tagttttata cccataaaga ataatggtga taactatcat cgccaggatg aataaacatt
      181 gttcatggca acttatatga ctttttcatt aaagcaatca gggagagcaa tgagtaaaca
      241 cgacaccgac acttcagatc aacacgccgc gaaacgccgc tggcttaatg cccacgaaga
      301 ggggtatcac aaagcgatgg gcaatcgcca ggtacagatg atcgccattg gcggcgcgat
      361 tggcaccggc ttgtttttag gtgcaggagc ccgactgcaa atggcgggtc ccgcactggc
      421 actggtttat ttaatttgtg gcttgttttc gttttttatt ctgcgtgcat tgggtgagct
      481 ggtgctacac cgcccttcca gtggcagttt tgtctcttat gcccgtgagt ttttgggtga
      541 gaaagccgct tatgttgctg gctggatgta cttcatcaac tgggcgatga cggggattgt
      601 tgatattacc gccgtcgctc tgtatatgca ttactggggt gcgtttggcg gcgtgccgca
      661 gtgggtcttt gcgctcgctg cacttaccat cgttggcacc atgaatatga tcggtgtgaa
      721 atggtttgcg gagatggagt tctggtttgc gcttattaaa gtactcgcca ttgtgacctt
      781 tttggtcgtg ggtacagtgt tcctcggtag tggtcagccg ctggatggca acaccactgg
      841 ctttcattta atcaccgata atggcggctt cttcccccac ggtttgctgc ctgcgctggt
      901 gttgattcag ggcgtagtgt ttgcttttgc ctccattgaa atggtgggta caactgccgg
      961 agaatgtaaa gatccgcaga ccatggtgcc taaagccatt aacagtgtga tttggcgtat
     1021 tggcctgttt tacgtcggct ccgtggtgtt gctggttatg ttattgccgt ggagcgcgta
     1081 tcaggcgggg caaagtccgt tcgtgacgtt tttctctaaa ctgggtgtgc catatatcgg
     1141 cagcattatg aacattgtgg tgctgaccgc tgccctctcc agcctgaact caggtctgta
     1201 ctgcaccgga cgtattctgc gctcaatggc gatgggcggt tccgcaccga gttttatggc
     1261 gaaaatgagt cgtcagcatg tgccgtatgc cgggattcta gcgacactgg ttgtgtatgt
     1321 cgtcggcgta ttcctcaact atctggtgcc gtcgcgcgta tttgagattg tgttgaactt
     1381 cgcgtcgctg ggaatcatcg cttcatgggc gtttatcatc gtgtgccaga tgcgcctgcg
     1441 taaagcgatt aaagaaggca aagcagcgga tgtcagtttt aaactgcctg gcgcgccctt
     1501 cacttcctgg ctgacattac tgtttttact gagtgtcctt gtgctgatgg cgttcgatta
     1561 cccgaacggg acttatacta tcgcggcgct gccgattatc ggtattctgc tggttatagg
     1621 ctggtttggt gtgcgcaaac gcgttgctga aattcacagc actgcgccag tcgtcgagga
     1681 agatgaagaa aaacaggaaa ttgtgtttaa gcctgaaacg gcgagttaat tgcaaaattg
     1741 cccggctacg tgccgggcaa attcagatta ctgacgaaag tgccggatac gccgtgataa
     1801 aaggcaggca agtctcaccg ttttcaccct cgccatatct attacagcgc aatacgaatc
     1861 acatcgtctg gctgggtagc ttcctgctgt ttagtggatt tttgtttcac actgacatac
     1921 agcgttttgc catcggcaga cagcgccagg ctgtttggat gagtcggcgt atcgaacgtt
     1981 ttcaccactt tatagctttt cgcgtcaatc acactgactt tacctgcctg acgatgcgtt
     2041 acgtaggctt cattacgcgc tgagttaaac agcacagcca gtgattccgg tgccgcaacc
     2101 ttcgccagaa tattgccatt acgggtatcg accactaaca cttctgcggc tttagaatcg
     2161 gtgataaatg cacgctgcct ggcggtatca aggctaatgt tgataaagaa gtgctctttg
     2221 ccgtcatcca gcagcttttt acggctgagg attttattgt cggcggtgtc gatggtaatc
     2281 aattcgccgt cagcgttagt ggtgtaaaga cgtttgcctt tgctatcaag cgccagaccg
     2341 gtactcattt taccggtgtt ctggatggcg gttttcagtt tgatattctc gccatcaacg
     2401 acccaaatca cgctctcttt accaatacca ctgatgtaaa cggtgttcgt ggcatcatca
     2461 gctaccagct cacgcggttg cagcgggcgc acctcttccg tgcgcttacg atcatccagc
     2521 accagacggc ctttcacttc gcccgttttg gcatctatcg ccgtgaccgc gctgtttacg
     2581 gtgttaccaa accacaacgt ctgagtcgtg ttattgatgg tggcaccaaa cggcttgaga
     2641 tcgttatgga tcgcctgcgt cacttccaga gtgaccggat caagacgata aaccacgcca
     2701 cctttatcca gtttgcggct ttgcgaagtg gcaagccaca gtgcgttttc ttgctggcta
     2761 taagccattt cgtaggcacc tttacctacc gctttacgca gcatttcttc tgcggcctgc
     2821 gtactgaatg atgaagcaac aagcaatgaa cctaacagta atgaaccacg caggcgcgat
     2881 gaaaacagat gacgtaaatg catgacgact ccctttgatg aaccgatatt tttgctgctt
     2941 cacaatgctt cgctaagcgt aatcatcgtt acgctcttgt tataaatggg aatggtaatc
     3001 attattttct caaatgtgga gcatttcttg ccgttacgac tacaattttc tcaattactt
     3061 aacgtattgt gccgtttcat tttccataaa tttacaattt cattaccatg gcggcgtttt
     3121 cccattctta acctggcttt tttcatgaag attttttccg tccgacagac cgttttgccc
     3181 gcactgcttg tcctttcccc cgttgttttt gccgctgatg aacagaccat gattgtcagt
     3241 gccgcgccgc aggtggtttc cgagctggat acgccagcag cagtaagcgt ggtggatggc
     3301 gaggagatgc gcctggcaac accgcgcatt aacttgtccg aatcactgac cagcgtgcct
     3361 ggtttgcagg tacaaaaccg gcagaactat gcgcaagatt tacagctatc gattcgcgga
     3421 tttggctccc gttccactta cggaattcgc ggtattcgcc tgtatgtgga cggtattccc
     3481 gccaccatgc ccgacgggca agggcaaaca tccaacatcg atttaagcag tgtgcaaaat
     3541 gtggaagtgc tgcgtggccc cttctctgcc ctgtatggca acgcgtctgg cggtgtaatg
     3601 aatgtcacca cccagaccgg acaacagcca ccaaccattg aagccagtag ttactacggc
     3661 agttttggca gctggcgcta tgggctgaaa gcaacgggcg caacgggaga cggtacacag
     3721 cccggcgatg tcgattacac cgtctcaacc acgcgtttta cgacccacgg ctatcgtgac
     3781 catagtggcg cacagaaaaa tttagccaat gccaaactgg gcgtacgcat tgatgaagcc
     3841 agcaaattaa gcctgatttt caatagtgtg gatatcaaag cagatgaccc aggtgggcta
     3901 accaaagcag aatggaaggc gaatccacaa caagcgcctc gtgcagaaca gtacgacacg
     3961 cgaaaaacca tcaagcaaac tcaggctggg ttgcgctatg agcgtagcct gagcgcgcaa
     4021 gatgatatga gtgtgatgat gtatgccgga gagcgagaaa cgacccagta ccagtcaatc
     4081 ccgatggccc cccaacttaa cccgtcgcat gcgggcggcg tgattaccct gcaacgccat
     4141 taccagggga tagacagccg ctggacacac cgtggtgaac tgggcgttcc ggtcacgttc
     4201 actaccggcc tgaactacga aaacatgagt gaaaaccgca agggctacaa taactttcgc
     4261 ctgaatagcg gcgtgccgga atacgggcaa aaaggtgagt tgcgtcgcga cgaacgcaat
     4321 ctgatgtgga acgtcgatcc ctatttacag acgcagtggc agctgagcga aaaactgtcg
     4381 ctggatgctg gcgtgcgcta cagctccgtg tggtttgatt ccaacgatca ttacgttact
     4441 ccgggtaacg gcgatgacag cggtgatgcc agttatcaca aatggctacc tgccggatcg
     4501 ctaaaatatg caatgaccga tgcctggaat atctatctgg cagccgggcg tggttttgaa
     4561 acgccgacga ttaatgagct gtcttatcgt gctgatgggc aaagcggtat gaactttggt
     4621 ttaaaaccat ccaccaacga tacaattgag atcggcagta aaacgcgtat tggtgatggg
     4681 ctgcttagtc tcgcattgtt tcagaccgac actgatgatg aaattgttgt cgatagcagt
     4741 agcggtgggc gtacgactta caaaaatgcc ggaaagaccc gtcgtcaagg cgctgaactg
     4801 gcatgggatc aacgtttcgc aggagatttt cgcgtaaacg cgtcctggac ctggcttgat
     4861 gcgacctatc gcagcaatgt ttgcaatgaa caggattgta acggtaatcg gatgccaggg
     4921 atcgcccgta atatgggctt tgcgtcgata ggttatgtac cggaagatgg ttggtatgca
     4981 ggcacggaag cgcgttatat gggcgatatt atggcagatg atgaaaatac ggcaaaagcg
     5041 ccgtcttata ctctcgtcgg cttattcacc gggtataaat acaattacca caatttaact
     5101 gtggatttat ttggtcgtgt cgataattta ttcgataaag aatacgttgg ttctgtcatt
     5161 gtcaatgagt caaacgggcg atattacgaa ccttcgcccg gacgaaatta ttgtgtcagc
     5221 atgaatattg cgtggagatt tgagtaatta ccttgatgcc cggtatttgc cgggcattta
     5281 ctttaacgat tgtattgctg gtataaaata gcaatatttt gttgcataat ttcagcaaga
     5341 caatgtctgc atccctcttt gtcttttgct tttaacgcag cgagtaacag atgattgttt
     5401 tctatatgct cccgtaattc cgctggatta atcgcttcat agagataatg taaaccaggc
     5461 cccatcctga cccacagttg ctcaatcatc tcacacagga tgggcatatt tgagcgatga
     5521 taaatcgcta agcgaaatag cctgtttaca ttaatgattt gttccatgtc gcccttttct
     5581 tgcgcctgct gtaatttctc gagcaattcc tggagttccg ccaggtcttg cggggtgagg
     5641 ttttcaacag ccagagcaac tgccattaat tccagttcgt agcagatccg attgatttcg
     5701 tctaattgac gtttccccac ttccggaact gtaaatgctt gcgctggtgc gacagaaagc
     5761 gcattcaccg aaaccagacg taataatgct tcacgcacgg gtgtaatact catacctaat
     5821 tgctccgcca gatttttagt aatcaggcgt gcgccaggtt ttagtgcgcc aatactaagt
     5881 tgatgtttca ggtcgttctc aacctgcaga gtcaaactga catgtttcat ttttcccgtt
     5941 ccaggcattt taattccttc gcgtgttttc tgtccaaccc tgcctgcatg gcagaaggag
     6001 ttcacctggt gtattaaagt gaataatcat aaaccaccca cctttgttgt tattagcagc
     6061 agaacaatga cgtggttagt taattaaagc tgaaaataag ctttttgcct ggatttttat
     6121 ggcggcttac gccgccgttg aaactttaat catcacccgc cacgcggatc accactttgc
     6181 cgaagttttt acccttcagc aggccgataa acgtctgtgg cgcattctct aaaccgtcag
     6241 taatttcttc gcggtagtgg attttatcct ctttcaccca ttgccccatc tccttctgaa
     6301 actcatggat gcggtgacca taattctgag caataataaa cccttgcaag cgaatacgtt
     6361 ttttcagcac cgtagccatc aacaaaggta aacgatccgg accgggtggt agctctgtag
     6421 agttatagct gctcactaag ccgcagacgg gaatgcgcgc agatgtatta agtaacggta
     6481 gcaccgcatc aaatacctta ccgcccacgt tttcataata gatatcaata ccttttgggc
     6541 acgctttcgc cagttgttcg gcaaaatcat ccgcgtggtg atcaaggcaa acatcgaagc
     6601 ctaacacctc ggtagcatgg cggcattttt ccgctccacc ggcaaccccc accaccctgc
     6661 aacctttaag tttgccgatt tgccccaccg ttgctcccac aggacctgtc gccgcagcta
     6721 ctaccaacgt ttcgccctct ttaggttgac cgatatccag cagccccata taagcggtaa
     6781 agcttggcat ccccagcaca cccagcgacc acgatggatt ttgcggatga tcgccaagtt
     6841 tcaccagatc atcaccactg gatatgtcat agtcctgcca tccactgtag cccagcaccc
     6901 agtcgccagg ctgataatca ggatgattcg actccacgac acggctcacc gtaccgccga
     6961 tcatcacgcc gccaatatca accggcggtg aataagatgg ctcatcgctc atacgtccac
     7021 gcatatacgg gtccagtgac aaataaactg tgcgcagtaa cacctgtcct tcacccggtg
     7081 tgacgacatc atcttcttca agacggaaat tctccggaac cggcgcgcca tgcggacgcg
     7141 aggccagaac ccaacgtcga ttacgctgct tttgttgccc cataatgccc tcctgtgctt
     7201 ttggcatgaa tccatcaata gtagcaggct cacgggattg gttttgtttg cagccgtcac
     7261 atcccctctg caacacgcaa taatttcatc gaggaatccg ttgcttcggg ctgttttcga
     7321 tagtattgat aacatcatca tcattatttt attgaggcca gacatgtcca tccgttttgc
     7381 ccgcaaagcc gactgtgctg ccattgcgga aatttataac cacgccgtgt tgtatacggc
     7441 ggctatctgg aatgaccaaa cggtggatgc agataaccgc attgcctggt ttgaagcgcg
     7501 gaccatagca ggttatccgg tgctggtaag tgaagaagat ggcgtagtga cgggatatgc
     7561 ctcatttggc gactggcgta gtttcgatgg ttttcgccat accgtggaac attcggttta
     7621 tgtccatccc gatcatcagg gcaaaggtct ggggcgtaaa ttgttaagcc gattgattga
     7681 tgaagcgcgg gattgcggga agcatgtcat ggtcgccggg atcgaatcgc aaaatcaggc
     7741 ctcgctgcat ctgcaccagt cgctgggatt tgtcgtcacc gcacaaatgc cgcaggtagg
     7801 cactaaattt ggtcgttggc tggatctgac atttatgcag ttgcaactcg acgagcgcac
     7861 tgaaccggac gcgattggat gaatcagtcg ctcacccttg cttttttgat tgccgccgga
     7921 attggtctgg tagtccagaa cacgctgatg gtgcgcatca cccagacctc ctctaccatt
     7981 ctcatcgcca tgttgctgaa ctcactggtg gggattgtgc tctttgtttc tattttatgg
     8041 tttaaacaag gcatggcggg gtttggcgaa ctggtgtcca gcgtgcgctg gtggacactt
     8101 atacccggct tgctgggatc gttttttgtc ttcgccagta tcagcggata tcggaatgtg
     8161 ggagcggcga caactattgc agtactggtc gccagccagc taattggcgg tctgatgctg
     8221 gatatcttcc gcagtcatgg cgtaccacta cgggcgttgt tcggcccaat ttgtggcgca
     8281 attttacttg tggttggcgc ctggttggta gccagacgct cattttaatc agaggatggt
     8341 gccgcctttg gttaactgtt cgtggcgcgc ttccatatct tctttatgct tgcgaccgtg
     8401 atgagcaata gcggtgcgca aacgctgctg ctgggtgtag cgatcttccc gacttaactc
     8461 cgcgtcatcg ctcagggcga ttaataattc gttcatatgg gcaatgacgc tctcttcaat
     8521 cgcggcatcc acgcgcgcga tgacttcatc cagatgcgac atactttctc cttaaccact
     8581 tgtgaaattt atcgattcat ccaaatgata taagtctgcg tggtgccgtc aagccagtga
     8641 gtaagattta aaacagtgaa aacaacagcg ccaccgggaa actcatcggc catgttgccc
     8701 ccaccagaaa ggcgcttaag aaacggatgc gtttcttatc gtgagaaaga aaccaggtga
     8761 taagaaatgc gattgctgcc ataaccgcat aaaaaacaag cctatgttga tagagagaca
     8821 tgtacgggcg tccagccaga tgaataaaac gcgcgcaaat atgcgtcatt ttttgacgtg
     8881 catcaagttt tttcaccagt ttgagaaaaa atcatcaaac agcaacttgc ccttatccat
     8941 cttcagaatg agtattattg cggattttct taacccgtac tatacacata ggggcaatga
     9001 taaaaggtgg caaaaatgaa tgtttccagt agaactgtag tactgataaa tgtctttgct
     9061 gctgttggtt tgtttactct tatctctatg agatttggct ggtttatttg atgtagtgat
     9121 tttgcacgca gcacgtactg tcagagaaat caactctctg acagtacgca agatcttctc
     9181 atactctcca ggtttacaac attatcctta atatttactt ctttttgctg gcatctacat
     9241 tgaaatgagt agaaaacatc cccctactgt cgtctataca aacagcttac tgattcaaac
     9301 ggaatcttgt tttcacattt ttctatcatg aatactttat acgcgcggga gtctataaat
     9361 gctttatact ttcaaggaat aacgtaaata taaaaagatg gcgtaaagta tatgcatggc
     9421 aggatgtttg caacctcctt gatgacgctg ccccattgaa attgcaaacc ccgctctggt
     9481 tatcttgccc atttatcatg caaaacagat aattataggc ctctgaatac ctcagaaaga
     9541 ttgaattttt tatagtccct ctcttgaata tttccatttg atatcaatcg attcatctct
     9601 tcaacaaaat aacttatatc atcacacttg ttattatccg gaaggtctga gtagttataa
     9661 ttccaccatt ttattctcaa cagttcatca ataacatttg aatcaaacct aaatctgatt
     9721 atttttgcag gaactcctgc aactatggca tatgggggca catctttggt aacaacggaa
     9781 ttggcagcaa taacagcacc atcacctatt gcgatgccac ctttcaatac aacatcattt
     9841 cctatccaga catcatttcc tataatcgga ttttcaggtt tggtaatgaa tggtttcaat
     9901 gtccagctac gttcaaattc actcatagca aacttatcaa attcaccgtt ataagtcatc
     9961 atgtgagtag taaaacgatt caaaggatga tttccaccca ttatttttac atttgatgca
    10021 atactacaaa atcgacctat acgtatattc cctgaaaaat ggcaggtcgg aaatgaaaaa
    10081 gcgccgacac tggagaaatt tttcacaggc attgttgaat attcttcagc aataacatta
    10141 tcttcaattg ttatcttgtc accttttgag aaaagaaata aattcctttc tttatacgac
    10201 ttcttcccct tatgatttaa aaagatttta ttatccatac aaaactcaaa gtgttttttc
    10261 gtccatctga aggtaagggt tttattttta tcttccgtga atttgtacaa ttgaactttc
    10321 attgttaata cttctactta taaattatta gtttaataac gatactctaa agccttatgc
    10381 taatcaactg tgacaggatg aaaaatcgcc atcaaacatt tagcctaatt
//
LOCUS       DAJVTL010000141        10399 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.143, whole genome shotgun sequence.
ACCESSION   DAJVTL010000141 DAJVTL010000000
VERSION     DAJVTL010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10399
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.143"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1931)
                     /gene="flhA"
                     /locus_tag="OQQ26_003593"
     CDS             complement(<1..1931)
                     /gene="flhA"
                     /locus_tag="OQQ26_003593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HCS1858926.1"
                     /translation="MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFIL
                     DLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHT
                     GAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGM
                     PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
                     NVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
                     VGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKA
                     PAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
                     KFAQEMGFLPPVVHIRNNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
                     GEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQE
                     AQQLLDRVAQEMPKLTEDLVPGIVTLTTLHKVLQNLLDEKVPIRDMSTILETLAEHAP
                     IQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGL
                     ADRLLAQTQEALSRQEMLGA"
     gene            complement(1924..3072)
                     /gene="flhB"
                     /locus_tag="OQQ26_003594"
     CDS             complement(1924..3072)
                     /gene="flhB"
                     /locus_tag="OQQ26_003594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
                     /protein_id="HCS1858927.1"
                     /translation="MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVCV
                     IWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVPV
                     ALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTV
                     FFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKK
                     LRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVAL
                     QYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQ
                     LYAAVAEVLAWVWQLKRWRLAGGQRPVQPTHLPVPEALDFINEKPTHE"
     gene            complement(3274..3918)
                     /gene="cheZ"
                     /locus_tag="OQQ26_003595"
     CDS             complement(3274..3918)
                     /gene="cheZ"
                     /locus_tag="OQQ26_003595"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HCS1858928.1"
                     /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
                     DLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF"
     gene            complement(3929..4318)
                     /gene="cheY"
                     /locus_tag="OQQ26_003596"
     CDS             complement(3929..4318)
                     /gene="cheY"
                     /locus_tag="OQQ26_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002210873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HCS1858929.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFEKLGM"
     gene            complement(4333..5382)
                     /gene="cheB"
                     /locus_tag="OQQ26_003597"
     CDS             complement(4333..5382)
                     /gene="cheB"
                     /locus_tag="OQQ26_003597"
                     /EC_number="3.1.1.61"
                     /EC_number="3.5.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate methylesterase/protein
                     glutamine deamidase"
                     /protein_id="HCS1858930.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSALTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
                     RVLPGHAYIAPGDRHMELARSGANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAV
                     GVILTGMGNDGAAGMLAMRQAGAWTLAQNEASCVVFGMPREAINMGGVCEVVDLSQVS
                     QQMLAKISAGQAIRI"
     gene            complement(5385..6245)
                     /gene="cheR"
                     /locus_tag="OQQ26_003598"
     CDS             complement(5385..6245)
                     /gene="cheR"
                     /locus_tag="OQQ26_003598"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HCS1858931.1"
                     /translation="MTSSLPCGQMSLLLQMTERLALSDAHFRRISQLIYQRAGIVLAD
                     HKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHH
                     FPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVL
                     EKARSGIYRHEELKNLTPQQLQRNFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQY
                     TVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLR
                     GQTVYALSKD"
     gene            complement(6264..7865)
                     /gene="tap"
                     /locus_tag="OQQ26_003599"
                     /pseudo
     CDS             complement(6264..7865)
                     /gene="tap"
                     /locus_tag="OQQ26_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310622.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein IV"
     gene            complement(7911..9572)
                     /gene="tar"
                     /locus_tag="OQQ26_003600"
                     /pseudo
     CDS             complement(7911..9572)
                     /gene="tar"
                     /locus_tag="OQQ26_003600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127686.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein II"
     gene            complement(9717..10220)
                     /gene="cheW"
                     /locus_tag="OQQ26_003601"
     CDS             complement(9717..10220)
                     /gene="cheW"
                     /locus_tag="OQQ26_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HCS1858932.1"
                     /translation="MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQ
                     VTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVV
                     DGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLD
                     SAASEVA"
     gene            complement(10241..>10399)
                     /locus_tag="OQQ26_003602"
     CDS             complement(10241..>10399)
                     /locus_tag="OQQ26_003602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HCS1858933.1"
                     /translation="HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE
                     QRMANTAA"
BASE COUNT         2420 a         3010 c         2514 g         2455 t
ORIGIN      
        1 gcacccaaca tctcctgacg ggatagcgct tcctgagttt gcgccagtaa acgatccgcc
       61 agccctggct ccagtccgcc cccgccctgc aacgcctgta gcaacaaacg ttccagcggt
      121 gtatcgaggc caataacatg aacttcatct ttgccaggaa accactgctg ggtaatcgcc
      181 cgtcccaacg ccacgcgcac gacggcggtt aattcatgtg gatcgctttg gatgggcgca
      241 tgttccgcca gcgtttcgag aatagtgctc atatcgcgaa tcggtacttt ttcatcgagc
      301 agattttgca gcactttatg cagtgtggtg agcgtgacga tgccaggaac gagatcttcc
      361 gtcagctttg gcatctcctg ggcgacgcga tccaacagct gttgcgcctc ctgacgacca
      421 aacagctctg cggcatgctg gctaatgagg tggttaagat gcgttgctac caccgtgctg
      481 gcctcaacca ctgtgtaccc ctgaatctgc gcctgttctt ttagcgcact ttcaatccag
      541 atagcattca ggccaaatgc cggatcgacg gtcgcctcac caggtaacgt cccggcagcg
      601 gtaccagggt taattgccag ccagcgcccc ggataagcat caccactgcc aatctctacg
      661 cctttcatca aaatacgata acgtgccggt tgcagatcca tattgttgcg aatgtgcacc
      721 accggcggca agaagcccat ttcctgagca aatttcttac gaatactacg aatacggccc
      781 agcaactcgc catcttgttg gaaatcaacc atcgggatca gtcgataacc cacttccatt
      841 cccagagaat cttccagttg tacatcgttc cacgtcgctt cgacaacggt attattctct
      901 gccattttta ccggtttggg ttcggcaggc gctttttgtt cgcgtccacg tatccaccag
      961 gccagcccga gcaatccggc agtgaacagc aaaaatacca ggttcggcat tccaggcacc
     1021 agaccgagta aaccgagcac ggcggcgctt aacaacataa cgcttgggtt actgaaaagc
     1081 tgattcacca tctgctcgcc aacatcctga tcggtgctga cacgcgtaac gatgaccccc
     1141 gcggcggtag aaatcaccag cgccggaatt tgtgccacca gaccatcgcc aatggtcaat
     1201 agcgtataac tttccgccgc gtgtcccatg ctcatgccat gttgcagcac gccgaccagc
     1261 aacccgccga caacgttaat gaccatgatg aggatcccgg cgatggcatc gccgcgaaca
     1321 aacttacttg ccccgtccat tgagccgtaa aaatcggctt cctgagtgac ttcggagcgg
     1381 cgttttttcg cctcatcttc accaatcaat ccggcgttaa ggtcggcgtc aatcgccatc
     1441 tgcttacccg gcataccatc gagaacaaag cgcgcaccca cttctgcgat acgcccggca
     1501 cctttggtaa tgaccataaa gttgatgatc acgagaatga caaacaccac gataccgata
     1561 gcgaaattgc caccaacgag gaagtgaccg aacgcttcga ccaccttccc tgccgccgct
     1621 gcgccggtat gcccttccat caaaatgata cgggttgaag ccacgttaag tgccagacgc
     1681 aacaacgtag taaacaatag aatggtcgga aacgcagcaa actcaagcgt gcgctgggta
     1741 aacatcgcca ccagcaacac catgatcgac aaggcaatat tgaaggtaaa caacaggtcg
     1801 agtatgaatg cgggcagtgg cagcaccatc atcgacaaga tcaacaggat caaaatcggt
     1861 ccggcaagga tctgccattg tgtcgatttc aggtttgcgg gcaggcgcag catcgcggcc
     1921 agattactca tgggtcggtt tctcgttaat aaaatccaag gcttccggca ccggaagatg
     1981 agtaggttgt acagggcgct gtccaccagc cagacgccag cgtttcagtt gccagaccca
     2041 ggccagcact tccgccaccg cggcgtacag ttgacccggt atttgttgac caatctccgc
     2101 atgtcgatac agcgctcgcg ccagcggcgg cgcttcaagc gtcgggacgt tattttcagc
     2161 gccaatttca cgaatgcgca gcgcgaccag ccctgcacct ttagcgacca ctttcggtgc
     2221 gctcattttg ttttcgtcat actgcaacgc taccgaatag tgggtcgggt tattgacaat
     2281 gacatccgct ttcggcacat cggccatcat ccgacgccgt gcggcagctc gctgcatctg
     2341 acggatccgc cctttaacat gagggtcacc ttcgctttgt ttgaactcat cacgaatatc
     2401 ctgcctcgac atacgcagct ttttcaggtg gctgaagatt tggaaaaaga cgtcaaatcc
     2461 caccattgga atgacaccaa gcaccaccag cagtgcgcat agccctacca aatccatcgc
     2521 attacccatg gcggtaatcg gagactcggc cattaagcgc atcatctgcg gccagtgatg
     2581 ccagagaaaa aaaaccgtca cgctgccaac caggatggtt ttcaaaattg ctttaagcaa
     2641 ctccgcgcca gtctgtgccg agaacatccg ttttatgccc ggtagcgggt tgagtttgga
     2701 aaacttcggc tgcaaggatt ttccgctaaa taccagcccc cccagcataa ccggagaaat
     2761 gagcgccacc ggcaccacgc cgctaatcag cggtagcagc gccagcatgg cttctctgat
     2821 cagcagaata atctgcccga ggatcagatt cgggtcattg ataatactgt gatcaaaatg
     2881 cagcccagcg gagagcatgc ccgacaatcg acgggccagc gacacaccgc caaaccagat
     2941 aacacacacg cccactaaca aaatcagcaa cgaggtcagt tcacgggaac gcgggatttg
     3001 cccctcttcc cgcgcttttt ctagtcggtg aggtgtgggg gcttctgttt tgtcgtcgct
     3061 ctcgtcagac acgtcgccaa tcctggaaag agtattaagc gtgaatgatg ccagagcgca
     3121 aagcgttcaa tggtttgagt aaggggcaaa acaggcggga tttagggctt ttgctgccac
     3181 acatcaagca tagtgtgcgt ttgtcggatg cggcgtcatc gtcttatcag accgcctgat
     3241 atgacgtggt cacgccacat caggcaatac aaatcaaaat ccaagactat ccaacaaatc
     3301 gtccacctga tcctgactgg ctaccacacc ggctttgctg gtatcgacct gaggtccatt
     3361 aagcaaactc tggttttcac gttttggacg cgactcctgt tccgggatgt tttccaacag
     3421 caccatcagc aactggcgtt cgatctcctg aatgacatcc atcatccgct taatgacctg
     3481 cccggtgaga tcctgaaaat cctgcgccat catgatttcc agcagttgcg cgttagtaaa
     3541 gctggtatgc gcgggtacat ctgccagaaa ttgtcgtgta tctgttacca gttcacgggc
     3601 gtcggcaagg tcaatcggat cggcaaacca gtcatcccaa cgttgggtta acgcttttgc
     3661 tgatttctcc atttgatcct gatgcggttg tgacgcctca acactgttca gcgcccgctc
     3721 cgcagcctgg gcggtcatct gcacaacata gtacaaacga tcgcgcgcat cggggatggc
     3781 ttccgccgct tcggcaatgg cctgatccag ccccagttcc cgcaaactgt cgcgcagcat
     3841 acgcgtcagg ctgccgatgc gcgcaatgat atcgccagct gaatgctcgt cagcaggttt
     3901 gattgatggt tgcatcatag tcgcatcctc acatgcccag tttctcaaag attttgttga
     3961 gtttttcctc cagcgtcgcg gcggtaaatg gcttcaccac atagccactg gcccccgctt
     4021 gcgccgcagc aatgatgttc tctttcttcg cttctgcagt caccattaac actggcaatg
     4081 ccgacatcgc gccatccgca cgaatcgttt tcagcaactc caggccatcc atattgggca
     4141 tgttccagtc ggagataaca aatccataac cgcctgcctg caacttattg agagcgtcga
     4201 cgccatcttc cgcttcctca acattattga atcccagctc tttcagcagg ttacgcacta
     4261 tgcgtcgcat ggtggaaaag tcatccacaa ccaaaaattt aagttcttta tccgccattt
     4321 cacactcctg atttaaatac gtatcgcctg tccggcacta atttttgcca gcatttgctg
     4381 gcttacctgg ctaagatcga ccacttcgca aacaccaccc atattgatgg cctcgcgcgg
     4441 catgccgaac accacgcaac ttgcttcgtt ttgcgcaagg gtccatgccc ccgcctgacg
     4501 catcgccaac attcccgccg cgccgtcgtt gcccataccg gtcaggatca ccccaaccgc
     4561 attacgcccc gcctgtttgg cgacagaatg gaacaacaca tctaccgaag gccgatgacg
     4621 gttaaccgcc gggccgtcgt gaattttgat ttgataattt gcgccactac gcgccagttc
     4681 catatgccga tcgcccggcg caatataggc atgtcccggc aagacacgtt ctccgtcttc
     4741 ggcttcttta accccgatct ggcaaagctt attaagtctg tcggcaaaag aacgggtgaa
     4801 accgggcggc atatgctggg taattaacag tgccgggctg gaaagcggca acggttgcag
     4861 tacgtgacga attgcctcag ttccacccgt tgaagcacca atcgcaatca gtttttcaga
     4921 actcaacaac ggccctgcct tcagcgttgt cagtgccgac aatggcttat gtgctgcaag
     4981 gctcgccttt gctgctgtac gcaccttttc agcaatcatt tcgctatacg ccagcattcc
     5041 ttcgcgaata cccagttgcg gtttggtgac aaaatctatc gcccccagct ccagcgcgcg
     5101 cagcgtgact tctgaccctt tgccggtcag ggaagaaacc atcacaacgg gcattggacg
     5161 caaacgcatt aatttttcga ggaaatccag tccgtccatc cgcggcattt caacatccag
     5221 cgtcaataca tcgggattga atttcttaat caaatcacgc gcaaccagcg gatcaggggc
     5281 ggtcgccacc atttccatgt cgctatggct gttgatgatt tctgtcatga tctggcgcat
     5341 cagtgccgaa tcatcgacag ataacaccct gattttgctc atcgttaatc cttacttagc
     5401 gcatacaccg tctgaccacg cagcgtgaag cggcgctcaa ggtggctaaa gttttcagag
     5461 tgacccgcaa acagcaatcc gtcgggttta aggagcggaa caaagcggcg caaaatctcc
     5521 tgctgggtag tttgatcgaa gtagatcatg acgttacgac agaagatcgc atcaaacggc
     5581 cccggcacgg tgtactgttt cgccagtaga ttcagcgggg caaaatcaac atagttcgcc
     5641 agctcctgac gcacgcgtac cagcccttca tgcggtcccg tccctcgcat gaaattccgt
     5701 tgcagttgct gcggcgtcag gtttttcaac tcttcatggc gataaatacc gcttctggct
     5761 ttttccagca cttcggtgtc gatatcactg gcaaacactt tccagcgtcc gggcgcggtg
     5821 cccaatgtgt cagccagcgt catcgcaatg ctgtacggct cttcgccggt cgaagccgcc
     5881 gcgctccata cgcgatactc gccagaacgg cgacgtgcgt gatccgcgag cagagggaaa
     5941 tgatgtgcct cacggaaaaa tgccgtcaga ttcgtggtca gcgaattgat aaacgcctgc
     6001 cactcaccgc tgtgctgatt agattccagc aagttcagat aatgaccgaa atccgtcagt
     6061 cccagcgaac gcaaacgacg aaccagtcgg ttgtaaacca tgtcgcgttt atggtcagcc
     6121 agaacgatcc cggctcgttg atagatcaat tgacttatcc gccgaaaatg cgcgtcggaa
     6181 agcgccaggc gctcggtcat ctgtaacaat aaagacattt gcccacaggg cagagatgaa
     6241 gtcatagcgc cttctcaatc acttcaggat accactggcg caatttgtaa ctgcgccgac
     6301 tcatgtcgtg ctacttcatg ttcttcaagg gtaaataccg ccacacgcga cgaaagatgg
     6361 tcggcctgat tcgccagttg ttccgttgcc accgccgctt cttctaccag cgaggcgttc
     6421 tgctgagtca cctgatccat ctggctgaca gcctgtgcaa cctgctcaat cccccgccgt
     6481 tgttcttccg acgccgaagc aatttctccc ataatatcgt tcacgcgggt caccgaactg
     6541 acaatatcgg tcatggtcgc ggcggcgtta ttcaccagtt tcgaaccctg ctggacacga
     6601 ttgactgact cttcgatcag ccctttgatc tcttttgctg cctgcgcgct acggctggca
     6661 agattgcgca cttcacctgc cactaccgca aaaccacgcc cctgctctcc ggcgcgagcc
     6721 gcttccactg ccgcattcag ggccagaata ttggtctgga aagcaattcc gtcgataacg
     6781 ctgataatgt cgccaatttt ttgcgagctg gtggcgatct cctgcatggt gtgagtcatg
     6841 gtactgacct gaacaccgcc cgcctgcgcc gttgtcgcgg cattttttgc cagttccgac
     6901 gcctgtcgtg cgttatcggc gttttgccct accgtggcgg ttaattgctc catactggcg
     6961 gccgtttgtg ccagcgatgc cgcctgctgt tcggtacgac ttgagagatc gttattgcct
     7021 gcgacaatct ccgcgatccc aatgtgcatc tcatggcttc ccttacgcac atcactcacc
     7081 gtcccacgca aagcctgctg catggtcttc aggctggcaa aaatggcggt gatctcatta
     7141 cgaccatata ccgcaatcgg acgcgccaga ttacccgcag caatgctgtc aaaatggcta
     7201 ccgataatgg ccagtggttg aacaatcatc ttgcgcgtcc accacagcgc actgctgatg
     7261 tagatcgccg caacaataat catgctgata aacaccagcg ccgaaatctg atagttacgc
     7321 tggctttgcg cactggcggc ttccagcaca tggttgatct ccatctgcca ggcctcaaag
     7381 ttaacgtcaa acgcattctg tgatccctgc accggcgcag tgaggaaatc cgaaagttga
     7441 ttactttcaa gccaggtcgc ctaatgttcg agatcgttgt gccagcgggc aaaacttttc
     7501 tccgtctctt tttgcaatgc cctgacgtgc tcgttgcccg cagtcatcgc cataaaactt
     7561 ttaaacagcg tggtggattg cttcagactg gcgcgcgccg tcgtcatcaa cgttttaatg
     7621 tcatccgccg gatagctaag cgctgtcaga gtgcctgctt tgttcagcgc ggtactggcc
     7681 tgtaacatta ccgcccgagt ttgcgctaat gccgcacgtt gctgattgct ctgctcgacc
     7741 tgattcagtc gttgcaaatc gtcgcgaaat gcccaaaaag acatgccgtt actgccaatc
     7801 tgcaagatcc cgcagagaat caaaattaaa aacagcgtgg tcgaaattcg aatacgatta
     7861 aacatcaacg ctccccatca ggcggcaatg accgcgttag taaatactcg tcaaaatgtt
     7921 tcccagtttg gatcttgttc agcaattcgc agtcgtggct gtgccggtgg ttgctcactg
     7981 gcaggacggg atggtgtttg cggtttattg gtgagtgggc tggctgccag acggaacgcg
     8041 gaaaccgctt gcgttaaacg actcgcctgt tcttccagcg cagcggcggc ggcagctgat
     8101 tcctgcacca gcgatgcgtt ctgttacgtg acgcgatcca tttccgaaac cgccaatgcg
     8161 acttgatcga tgccacggct ctgttcatcc gatgccgatg caatctcgcc cataatgtca
     8221 gtcacgcgag tgacagcatt gacgatattg ttcattgttt ccccggcgct ttcgaccagc
     8281 accgaaccgg tatcaacgcg tgagacggaa tcttcaatga gggctttgat ctcttttgcc
     8341 gcctgggcgc tacgactggc aagattacgc acttcgcccg ccaccacggc aaaaccacgg
     8401 ccctgttcac ccgcacgcgc ggcttcaaca gcggcattca gcgcgaggat attagtctgg
     8461 aaggcaatac catcgataac gctgataatg tcggcaattt tcttcgaact atcggcgatc
     8521 tcatgcatcg ttttcactac gccatccacc actttgccgc cgtgctgggc ggtgtcggag
     8581 gcactttgcg ccagttgcga ggcctggcgg gcgttatcgg cgttttgctt cactgtcgcg
     8641 gtgagctgct ccatgctggc ggcagtttct tccagcgcgg atgcctgctg ttcagtacgg
     8701 gaggaaagat cggtgttgcc cgccgcaatt tcacgggtac cggcatagat ggcatctgaa
     8761 ccttcgcgga catgagtgac ggtgtcagtc aaagagcgtt gcatatgtga aacgctctgc
     8821 gccaggtcgc ccatttcact gcgcccgtca atggtcaggg tattcgccag gttaccaccg
     8881 gcgatttcac gaatgtgagc aataattttt gccagcggag taagcaacat acggcgaatg
     8941 ccgtaccacg ccaccagcag aatcaatacc accaccagcg cgataaccgc cagttgccac
     9001 tgggcaaatc ggtaatcatc tgcgttgtca gtgacgatat cgcgatacag tttttcactg
     9061 ctgagggcgt actgagcaaa cgcttcgccc attgcatttt gcattcccta ggttggctga
     9121 gcgaaataag ctccagtatt gccataatca agataatcaa tcagttcagt taacgctgtg
     9181 taatagtttt tatatttttc atcaatatta cgactggtag cgaccatttc aggtaacggt
     9241 gccatgcttt tgaatttttt ataatgcgtc gctgcctggg ccaatgtttt cctggcgcta
     9301 tcgagcaatt caactttggc gttactttgt tgattggagg aatccatcat catccgcacc
     9361 gctgaacgac tcaggttaat gcgcgtttgc agcattaaat cccaggttga cgtcagctcg
     9421 ccctgctgtt cccgtaattg attggaaacc acaaagctct tctggctatg gtgaagggaa
     9481 gaaaaaaaca aactgccgga aataagctgt aacagtgcga atacccccag caccattacc
     9541 aacagcgtga ctacgcggat acggttaatc ataaggcacc ttcctgaaaa caagttgatc
     9601 tcgttatcgg caagaagggg ggaaacttta ttgctgatgc cacccgccgc gaaattgaaa
     9661 taaaaaaccc gatgcgcaga tcatcgggtt catttcaatt gaggaaatcg ggagaattac
     9721 gccacttctg acgccgcgct atctaacagc gccatctctt cgctgttcag cagtttttcg
     9781 atgttcacca gaatcaacat acggtcgccc agtgcgccca gtccagtgag atattctgtt
     9841 gaaagcgtca cggcaaattc tggtgccgga cgaatttgct ccgccgtcaa tgaaagcaca
     9901 tctgaaacgc cgtcaaccac gatgccgacc acccgctgtc cgagattcag gacgataact
     9961 accgtgttgt cgttatagtc cacatccacc tggctgaact taattcgtaa gtcaacaatc
    10021 ggcacaataa cgccgcgcag attcgtgacg cctttgataa acgctggcgt atttgcaatc
    10081 cgtgttacct gatcgtagcc acggatctcc tgcactttca ggatatcaat accgtactct
    10141 tcatcaccaa gggtaaatac cagaaattcc tggcctgacg gctcgctggc cagctttgtt
    10201 acattcgtca taccggtcat attgttacct ttttactcat tcaggcggcg gtgttcgcca
    10261 tacgttgttc gcggtttatc gcctgcaagg cggagacatc aacaatcagt gccacgctgc
    10321 cgtcgccaag aatggtcgca gcagaaatgc cggggacttt gcgatagtta ctttcaaggt
    10381 ttttaaccac aacctggtg
//
LOCUS       DAJVTL010000142        10233 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.144, whole genome shotgun sequence.
ACCESSION   DAJVTL010000142 DAJVTL010000000
VERSION     DAJVTL010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10233
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.144"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(81..1136)
                     /locus_tag="OQQ26_003603"
                     /pseudo
     CDS             complement(81..1136)
                     /locus_tag="OQQ26_003603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001348561.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
     gene            complement(1667..3239)
                     /gene="lsrK"
                     /locus_tag="OQQ26_003604"
                     /pseudo
     CDS             complement(1667..3239)
                     /gene="lsrK"
                     /locus_tag="OQQ26_003604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416028.3"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer-2 kinase"
     gene            complement(3318..4271)
                     /gene="lsrR"
                     /locus_tag="OQQ26_003605"
     CDS             complement(3318..4271)
                     /gene="lsrR"
                     /locus_tag="OQQ26_003605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LsrR"
                     /protein_id="HCS1858934.1"
                     /translation="MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTR
                     LKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRL
                     GIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGI
                     GQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDD
                     ATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTDIKIHNELIGLPLSALKTI
                     PVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS"
     gene            4520..6055
                     /gene="lsrA"
                     /locus_tag="OQQ26_003606"
     CDS             4520..6055
                     /gene="lsrA"
                     /locus_tag="OQQ26_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter ATP-binding
                     protein LsrA"
                     /protein_id="HCS1858935.1"
                     /translation="MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLG
                     GNGAGKSTLMKIIAGIIPADSGTLEIGGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLS
                     IKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSQDVADRQMVEILRGLMRDSR
                     ILILDEPTASLTPAETERLFRRLQELLATGVGIVFISHKLPEIRKIADRISVMRDGTI
                     ALSGKTSELSTDDIIQAITPAVREKSLSASQKLWLELPGNRPQHAAGTSVLTLENLTG
                     EGFRNVSLTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNGKEINKLSTGE
                     RLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLERYRRALNI
                     KFNQPEQAARTLSGGNQQKILIAKCLEASPQVLIVDEPTRGVDVSARNDIYQLLRSIA
                     AQNVAVLLISSDLEEIELMADRVYVMHQGEITHSALTGRDINVETIMRVAFGDSQRQE
                     ASC"
     gene            6049..7077
                     /gene="lsrC"
                     /locus_tag="OQQ26_003607"
     CDS             6049..7077
                     /gene="lsrC"
                     /locus_tag="OQQ26_003607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter permease LsrC"
                     /protein_id="HCS1858936.1"
                     /translation="MLKFIQNNREITALLAVVLLFVLPGFLDRQYLSVQTLTMVYSSA
                     QILILLAMGATLVMLTRNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLA
                     GFFNGVLVAWLKIPAIVATLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVS
                     AIGWLTIILVAFMAWLLAKTAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMA
                     ALAGIVFASQIGFIPNQTGTGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQID
                     SVLVLLRIPAWWNDFIAGLVLLAVLVFDGRLRCALERNLRRQKYARFMTPPPSVKTAS
                     SGKKREAA"
     gene            7077..8076
                     /gene="lsrD"
                     /locus_tag="OQQ26_003608"
                     /pseudo
     CDS             7077..8076
                     /gene="lsrD"
                     /locus_tag="OQQ26_003608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416032.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter permease LsrD"
     gene            8088..9110
                     /gene="lsrB"
                     /locus_tag="OQQ26_003609"
     CDS             8088..9110
                     /gene="lsrB"
                     /locus_tag="OQQ26_003609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autoinducer 2 ABC transporter substrate-binding
                     protein LsrB"
                     /protein_id="HCS1858937.1"
                     /translation="MTLHRFKKIALLSVLGIAAISMNVQAAERIAFIPKLVCVGFFTS
                     GGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPAL
                     KRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYS
                     SPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAII
                     APDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISV
                     YVADALLKKGSMKTGDKLDIQGVGQVEVSPNSVQGYDYKADGNGIVLLPERVIFNKEN
                     IGKYDF"
     gene            9137..10012
                     /gene="lsrF"
                     /locus_tag="OQQ26_003610"
     CDS             9137..10012
                     /gene="lsrF"
                     /locus_tag="OQQ26_003610"
                     /EC_number="2.3.1.245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxy-5-phosphonooxypentane-2,4-dione
                     thiolase"
                     /protein_id="HCS1858938.1"
                     /translation="MADLDDIKDGKDFRTDQPQQNIPFTLKGCGALDWGMQSRLSRIF
                     NPKTGKTVMLAFDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNK
                     PVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLV
                     DAGMKVGMPTMAVTGAGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGC
                     PVPIVIAGGKKLPERESLEMCWQAIDQGASGVDMGRNIFQSDHPVVMMKAVQAVVHHN
                     ETADRAYELYLSEKQ"
     gene            10036..>10233
                     /locus_tag="OQQ26_003611"
     CDS             10036..>10233
                     /locus_tag="OQQ26_003611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HCS1858939.1"
                     /translation="MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDP
                     EVNSRFYIYEAYKDEDAVAFHK"
BASE COUNT         2523 a         2518 c         2550 g         2642 t
ORIGIN      
        1 taaccactcc ggtgcatact taaaggtgtg cgcgccgttg gctaacttcg ttaactcgcc
       61 tacccgctgg ttgttcatcc aatatagcgg aaagcttcgc ctgttccgag gaaattccaa
      121 tgccctttat cggtcacgtt gacgacaccg tgggaaccgt cctgaacgcc caccaatgaa
      181 tattctttgt tattaattag tccattattg gaaatattga ctgcgccatt accgaaatat
      241 ccattataga gtctgcgtac cgtgatgaca gagtcttgat cctgcacatt cagggttccg
      301 acaccggtgg cattgccacc gataatcgta ttttcagccg taatcagccc accctcgcga
      361 atagtcgcct ccccagttcc ttgattacca atttgaaatt caattgagga atcattattt
      421 tttattagcc actcgccacc cttttcaacg acaaccttac cattactgtt cgcttgatat
      481 cctaaaatgg cgactattga actcgtgacg tagcccttat ccgtaatatt taatgagccc
      541 gtaccgtaac tccttatttc gaataattcg gtcgtcagaa ccgagtcctc tccctcaaca
      601 ttgaccgtcc cgacgcctcc tgtcgaagaa cctaatctta aatagcctcc atcgacgtga
      661 cccttctgtt taatattcag cgtccccgtt ccggattgac ccacatttaa aggccttgca
      721 ttatttccgc tatcatacaa tcgccaggtg ccacccaaaa cattaacggt gccctctgag
      781 tcctcattag cgccaatgac gctggtagta atagtggtta aggaggcatt accgccagcc
      841 aaaatattaa gcactccagt gccataccag ccaaccaggt aggcatcata agcaacatca
      901 gcaacatcag tatcaatatt ggtaatctga tcattatcaa cttccagact tgcaccagac
      961 gctgaaccgc ttagtgccag caaaacaccc agcgtcaatc tactgaattt cgttgtcagt
     1021 ccagaggatt tacgcaaatt aaccgtcgat gttttacctg ccctgcgagt taattccgag
     1081 caggcctgaa atacctgtag agtgcaattc catatcacgc gatagattct attcatataa
     1141 acgctccata tacaaacaat acagccatga aagagatgag tcgtcagaca ttaaaaatga
     1201 aacttattaa attgtcagag gtctgtattg agtgttagtt ggaggtggga aggtgtcaat
     1261 ttggctaatt tgctaatgct ttcgaattga tagattaaaa attgcatagt tcttatttta
     1321 tttaaaaatg aaccatgagc tattgttgct taataagaaa aatgtttctt tcaataagaa
     1381 aattaccatc atcatattta acaaagaata gcactaattg ctaaaaatcg aagtttatta
     1441 aagtcctttt tcatccatta atgtctttag gaatattcgt tataaaataa gggttatgct
     1501 taatgcttta aggaaaatag caattttccc ttgaatatag tactggtgat ggaacgatga
     1561 atctgcaagc tggcatttaa caagccagct ctaaaagaag ggaaataaga ataactatac
     1621 tcaaaaacta acagccacgg tcatcatgat gtggctgtca atgaaactat aacccaggcg
     1681 ctttccataa cgacgtcgtc agtccatgat caaccagccc cagctgatcc tgataaactg
     1741 cctgccactt atcgcgtgaa tcctgataaa gttcatgctt ttccgggtct ggtgtgtgcg
     1801 tccgttccta gcgaaccagg cgttctccgg tttctgctat tgatgaaaaa attccggcac
     1861 cgacgccagc tgcaatggca catcctaatg cggtggcttc tttgactacc ggaatattga
     1921 cgggtaatcc cgagacatca gcgagaattt gactccataa tttccctttt gaacctccgc
     1981 cagcagaaac cagcgaggtg ggatgaatat tcgagaaatc agcaagttgc tgcaagttac
     2041 acgctgatac aatcgccgca ttttcttcca gcgcacgaaa caatgtcgct ttgttacatt
     2101 tatccgggtc aatggacaag ttaatagagg aaggtgcggc gtgataccag gttttaaagc
     2161 gcattctgtc ggagaatatc ggcattacgc cccacgaccc aggcggcacc cgactggcca
     2221 tctcttccag cagcgtatag gtgtcgatgc ctaaacgttc ggcaatcagt ttttcttcgg
     2281 cacagaaagc atcgcggaac cagcgcatgg tgagtccggt aaaaaagctt atagattcag
     2341 cttgtaccat gccaggaata acatgaggat taacgcgcac gttcatttct gggtctgtca
     2401 ccggcgcggc taaatttaca acttgctgcc agaatgtgcc gccaagaacc gcggtttgtg
     2461 ccggacgcac aacgcctaac cctaggcaac caagctgcac gtcgcctcct ccaacgacca
     2521 ccggagtgcc cgccttcaga ccgcagagtt ccgccgcttg tgaacttacc acgcccagca
     2581 atgtgccggt ttctttgaca ggagaaagaa tatcggcacg caggccagcc atatccagca
     2641 atgcaggttt ccagtcacgg gtggttagat caagaagtcc cgtggtgcca gcgttagagg
     2701 gatccaccgc cagttcgccg ctgagcatat aggccagcca gtcgctgatc atggtgatgg
     2761 ttgatgcctg acggtaaata tcggaacgat ggtgcgccag ccaaagtaat ctggggatgg
     2821 cacttaaagc cagtgtttgt ccggtcgcgc gataaacttc gttttcaaag gtatagttgt
     2881 gcagttcttt aagttcgcta acttcacgcg ccgctctggc atccacattg gcgcaggccc
     2941 agatcggtgt caatgccttc acgcatcgaa catgccgaaa cggcagcgat atactccggg
     3001 gctatgccgg cgttgtgcaa cgcctagcgc atacactcac acgccagttg ccagtttttg
     3061 ttgagatcaa attccataga accaggaacg tccggtactg ccagatgccg ccactccgcc
     3121 tgtcccactg ctatttgatt gccttccagg tcgaatatca cagcccgaat acttccggtg
     3181 cctgcatcca gcgccatcag gtagtacttt gattctgaag gggtaaagag tcgagccatt
     3241 agattatcct cggcttatgc gttctgtctg ttcctctata cgttctccat cattcccagt
     3301 aataaggtca tgcaaattta actacgtaaa atcgccgctg ctgtgtcctg atcggtaacc
     3361 agtgcgttga tataaccgcc tttcattgca gcggcaattg cttcggcttt attttctccc
     3421 cctgccacac caacccggac gggtatggtc ttcagcgcgc ttaaaggtaa gccaatcagt
     3481 tcgttatgta ttttaatatc cgtgacaacg tcaccttttg catcaaaaaa gtagcctaaa
     3541 atatcgccaa ccgccccttt tcgaccaatc attaactgtt cgccctggct gatgtaaccg
     3601 gagcgaatga ttgtcgcgtc gtcttgttga ctcacggccc caatgccgac aatcgccaca
     3661 tccgctgctt gcgcggctag cagaacatct ttgacgcaat tttcattttt tagcgtacgg
     3721 gcaatatcag cggaggatgc ccgtaacgga gccggaataa tattcacact gcacgccgcg
     3781 ttaagctgcc cgatacccgt catataagaa ccgacgccac cggagagcgt gaccaggcga
     3841 atttgctgtg acgaaataaa accacttaag cgttgcagcg tattcatggt tgcctcgcca
     3901 aaaccaatcg ccagcatctg ttgtggttga agtaaactca tcaacatatg cgccgcgcct
     3961 atccctagtc gcccgccgac atcagcatcc gcaagcccag ggatcacccg gacatgttgc
     4021 agcgaaaact gacgacgtaa ttgagtttca tattccagac agccttcaaa gcgagaatta
     4081 atctgtacgc gaataatgcc ggattgatgc cctttctcca gcaatcgcga cactttcaaa
     4141 cgtgtcaagc cgagacgatc gctgatctca ctctgggtca gcccgtcgtg gtagtaaaac
     4201 cacgcgatcc gcgcgacctg ttcttcttca cacattccct gttctgaaat tgccgaatcg
     4261 ttgattgtca taattcattc ttcactttga acatatttaa atctttaatg caattgttca
     4321 gttcttgcgc atttatatct gtgatggcaa ccacagtttg actctacgag tatgaacaaa
     4381 cgcaaccgtg aaaatcaaaa tagcataaat tgtgatctat tcgtcggaaa tatgtgcaat
     4441 gtccacctaa ggttatgaac aaattaaaag cagaaaaaca tttgttcaaa actcacctgc
     4501 aaaactgaac gggggaaata tgcaaacgag tgatactcgc gcgttaccgc tactttgcgc
     4561 ccgctcggtt tataaacagt attcaggggt taatgtcctg aaaggcatcg attttacgtt
     4621 gcaccagggg gaggtccacg ccctgctcgg cggcaatggt gccggtaaat cgacgttaat
     4681 gaagattatt gccggtatta tccctgctga tagcggtacg ctggagattg ggggcaacaa
     4741 ctacgtcaga ttaacgccag ttcatgctca tcagctgggt atttatctcg ttccccagga
     4801 accgctgctt ttcccaagcc tgtcgataaa agaaaacatc ctgtttgggc tggcaaaaaa
     4861 acagctctcc atgcagaaaa tgaagaactt gctggcggcg ctgggctgcc agtttgatct
     4921 gcatagtctg gcaggatcgc aggatgtcgc cgatcgccaa atggtggaaa tcctccgcgg
     4981 gctgatgcgc gactcgcgga ttctgatcct cgatgaacct accgcctcgc ttacccctgc
     5041 ggaaaccgaa cgcttgtttc gtcgcttgca agagctgctt gctactggcg tgggtattgt
     5101 ttttatctcg cataagctgc cggaaattcg caagattgcc gatcgaatta gcgtgatgcg
     5161 cgacggaacc atcgccttaa gcggcaaaac cagcgaactg tctaccgacg acattattca
     5221 ggccattacg ccagcggtac gggaaaaatc gctctctgcc agccaaaaat tatggctgga
     5281 gttacctggc aaccgcccac aacatgccgc cggaacgtcg gtgctgacac tggaaaatct
     5341 gactggcgaa ggtttcagga atgtcagcct gacgctcaat gccggagaaa ttctgggcct
     5401 ggctgggctg gtgggagccg gacgcacaga actggccgag acgctctatg gtctgcgtac
     5461 tttgcgtggc ggacgcatta tgctgaatgg taaagagatc aataaattat ccactggaga
     5521 acgtttactg cgcggtctgg tttatctgcc ggaagatcgc cagtcatccg gactgaatct
     5581 cgatgcttcg ctggcgtgga acgtctgcgc ccttactcat aaccttcgtg gattctgggc
     5641 gaaaaccgcg aaagataatg ccaccctgga acgttatcgt cgggcgctga atattaaatt
     5701 taaccaaccg gaacaagctg cacggacatt atccggtggc aaccagcaaa aaatcctcat
     5761 tgccaaatgc ctggaagctt cgccgcaagt attgattgtc gatgagccga cgcgcggcgt
     5821 ggatgtctcg gcccgtaatg atatctacca gctgttgcgc agcatcgccg cacaaaatgt
     5881 ggctgtgctg cttatctcct ccgacctgga agagatcgaa ctgatggcag atcgtgtgta
     5941 tgtgatgcat cagggcgaaa ttacccactc tgcactgacc gggcgcgata ttaatgtcga
     6001 gactattatg cgcgttgcct tcggcgatag tcagcgtcag gaggcgtcat gctgaagttt
     6061 attcagaaca accgtgaaat cacggcactg ctggcggtgg tgctgctgtt tgtattaccc
     6121 ggttttctcg accgccagta tttaagtgtg caaacgctga ccatggttta tagcagcgcg
     6181 caaatcctga tcctgctggc aatgggcgcg acattggtaa tgcttacgcg caatattgat
     6241 gtttcagtgg gttcgattac cggaatgtgc gcagtgctgt tggggatgtt actgaacgca
     6301 ggatattcac tacctgttgc ctgtgtcgcg actttactgc ttggtttgct cgcgggattt
     6361 ttcaacggtg tcctggtcgc gtggctaaag atccctgcca ttgttgccac ccttggcacg
     6421 ttagggttgt acagaggcat catgttgctg tggactggcg gtaaatggat tgaagggtta
     6481 cccgccgaac tgaaacagct ctccgcaccg ctgctgtttg gcgtttccgc gattggttgg
     6541 ttgacgataa ttctggtggc atttatggcc tggctgctgg caaagacggc gtttggacgc
     6601 agtttttatg ccacgggcga taatttacag ggcgctcgtc aactgggcgt tcgtacggaa
     6661 gccattcgca ttgtggcatt ttcgttgaac ggttgcatgg cggcactggc gggaattgtg
     6721 tttgcttcgc agattggttt tatccccaac cagaccggta ccgggctgga gatgaaagca
     6781 attgcagcct gcgtgctggg cggcattagt ttgctcggcg gttccggtgc gatcatcggt
     6841 gcggtactcg gcgcatggtt cctgacgcag atcgatagcg tactggtgct gttgcgcatt
     6901 ccggcatggt ggaacgattt tatcgcgggc ctcgtgctgc tggcggtgct ggtgtttgat
     6961 ggacgcctgc gttgtgcgct ggaacgtaat ctacggcggc aaaaatatgc ccgctttatg
     7021 acgccaccgc catccgttaa aaccgcttcg tcaggtaaaa aacgggaggc cgcataatgc
     7081 gtattcgcta cggttgggaa ctggctattg ccgcactgct cgttattgag attgtcgcat
     7141 ttggtgcaat taacccgcgg atgttagatc tcaatatgtt gctgttcagc accagtgact
     7201 ttatctgcat tggcattgtc gccctaccgc tgacgatggt gattgtcagt ggcgggatcg
     7261 atatttcgtt tggttcgacc atcggcctct gcgccattgc attgggcgta ctgtttcaaa
     7321 gtggtgtgcc gatgccgatg ccgctggcga tactcctgac cttactgctc ggcgcattgt
     7381 gcgggctgat caacgccgga ttaattatct ataccaaagt taacccgctg gtgattacgc
     7441 ttggcacgct gtatctgttt gccggaagcg ctctgctgct ttccggtata gccggagcga
     7501 cggggtacga aggtattggt ggattcccga tggcgtttac agatttcgct aacctggatg
     7561 tgctgggact ccccgttccg ctgattatct tcctgatatg tctcctcgtt ttctggctct
     7621 ggctgcataa aacccatgcc ggacgtaatg tgtttttgat tgggcaaagc ccgcgcgtgg
     7681 cgctttatag cgcgattcca gttaaccgca ccttatgttg cgctctatgc catgacgggg
     7741 ctggcgtctg cggtcgccgc tgtgctgctg gtatcgtatt ttggttcagc acgttccgat
     7801 ctcggtgcgt cgtttctgat gcccgccatc accgccgtgg tgcttggcgg tgccaatatt
     7861 tatggtggtt ccggttccat tatcggcacc gccattgcgg ttttattagt gggatatttg
     7921 caacaaggtt tgcaaatggc aggagtgcca aatcaggtgt ccagcgccct ttccggtgcg
     7981 ctacttatcg tcgttgtcgt aggtcgttcc gttagcctgc atcgccagca aattaaagag
     8041 tggctggcgc gtcgggccaa taacccattg ccataaagga tatcttcatg acacttcatc
     8101 gctttaagaa aatcgcctta cttagcgttc ttggcattgc cgcaatctct atgaatgtgc
     8161 aggccgcaga gcgtattgca tttattccca aactggtttg cgtgggattt tttaccagcg
     8221 gtggcaacgg cgcacaacaa gcgggtaaag agctgggcgt tgatgtgacc tacgacgggc
     8281 cgacagaacc cagtgtttct ggtcaggtac agttgattaa taacttcgtc aatcaaggtt
     8341 ataacgccat tatcgtttct gcggtttcgc ctgatggctt gtgtccggca ctgaaacgcg
     8401 ccatgcaacg tggtgtgaga gtgctgacct gggactctga tactaaaccg gagtgccgct
     8461 cttactacat taatcaggga acgcccgccc agttgggagg tatgttggtg gatatggcgg
     8521 cgcgtcaggt gaataaagac aaagccaaag tcgcgttttt ctactcaagc cccaccgtta
     8581 cggaccaaaa ccagtgggtg aaagaagcga aagcgaaaat cgccaaagag catccaggct
     8641 gggaaattgt cactacgcag tttggctata acgatgccac taaatcatta caaaccgcag
     8701 aaggaatatt aaaagcgtat agcgatctcg acgctattat cgcccccgat gccaacgccc
     8761 tgcccgctgc cgcacaagcc gcagaaaacc tgaaaaatga caaagtagcg attgtcggat
     8821 tcagtacgcc aaatgtgatg cgcccgtatg tagagcgcgg cacggtgaaa gaatttggac
     8881 tgtgggatgt ggttcagcaa ggcaaaattt cagtgtatgt cgcggatgca ttattgaaaa
     8941 aaggatcaat gaaaacgggc gacaagctgg atatccaggg cgtaggtcag gttgaagtct
     9001 cgccaaacag cgttcagggc tatgactaca aagcggatgg taatggcatc gtactgttac
     9061 cggagcgcgt gatattcaac aaagagaata tcggcaaata cgatttctga tgtgcattac
     9121 ttaaccggag taagttatgg cagatttaga cgatattaaa gatggtaaag attttcgtac
     9181 cgatcaaccg caacaaaata tcccttttac cctgaaaggt tgcggtgcgc tggattgggg
     9241 aatgcagtca cgcttatcgc ggatatttaa tccgaaaacg ggtaaaaccg tgatgctggc
     9301 ctttgatcat ggttattttc aggggccgac taccggactt gaacgcattg atataaatat
     9361 cgccccgctg tttgaacatg ccgatgtatt aatgtgtacg cgcggcattt tgcgcagcgt
     9421 agttccccca gcgaccaata agccggtggt actgcgggcg tcaggtgcga actctattct
     9481 ggcggaatta agtaatgaag ccgtggcgtt atcgatggat gatgccgtgc gcctgaacag
     9541 ttgcgcggtg gcggcgcagg tttatatcgg cagcgaatat gaacatcagt cgatcaaaaa
     9601 tattattcag ctggttgatg ccggaatgaa agtgggaatg ccgaccatgg ccgtgactgg
     9661 cgcgggcaaa gatatggtgc gcgatcagcg ttatttctcg ctcgcgactc gaatcgccgc
     9721 tgaaatgggg gcgcaaatta tcaaaaccta ttatgtcgaa aaaggttttg aacggattgt
     9781 tgccggatgt ccggtaccca ttgttattgc tggcggtaaa aaattaccgg agcgcgagtc
     9841 gctggaaatg tgctggcagg ctatcgatca gggcgcttct ggtgtggata tggggcgtaa
     9901 tattttccag tctgaccatc cggtggtgat gatgaaagcc gtacaggcgg tggtacacca
     9961 taacgaaacg gctgatcggg catatgaact ctatctgagt gaaaaacagt aactgcggat
    10021 ttaaggagaa gaattatgca cgtcacactg gttgaaatta acgttcatga agacaaggtt
    10081 gacgagttta tcgaagtttt tcgccagaac cacctgggct ctgtacagga agaaggcaat
    10141 ttgcgcttcg atgtcttaca ggacccggaa gtgaattcgc gcttttatat ctacgaagcc
    10201 tataaagatg aagacgcagt ggcgttccat aaa
//
LOCUS       DAJVTL010000143        10169 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.145, whole genome shotgun sequence.
ACCESSION   DAJVTL010000143 DAJVTL010000000
VERSION     DAJVTL010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10169
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.145"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            229..1044
                     /gene="gspC"
                     /locus_tag="OQQ26_003612"
     CDS             229..1044
                     /gene="gspC"
                     /locus_tag="OQQ26_003612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
                     /protein_id="HCS1858940.1"
                     /translation="MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVK
                     NGQIINQPTNAFQSEFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSND
                     ETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDI
                     IKQPDSESQNVLADYIIATPIRDGEQIYGLRLTPRKGLNAFTTSLLQPGDIALRINNL
                     SLTHPDEVSQELSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGQRHERTQ"
     gene            1028..2980
                     /gene="gspD"
                     /locus_tag="OQQ26_003613"
                     /pseudo
     CDS             1028..2980
                     /gene="gspD"
                     /locus_tag="OQQ26_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417784.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
     gene            2990..3514
                     /locus_tag="OQQ26_003614"
     CDS             2990..3514
                     /locus_tag="OQQ26_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001219904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspE"
                     /protein_id="HCS1858941.1"
                     /translation="MRIHSPYPASWALAQRIGYLYSEGEIIYLADTPFERLLDIQRQV
                     GQCQTMTSLSQADFEARLEAVFHQNTGESQQIAQDIDQSVDLLSLSEEMPANEDLLNE
                     DSAAPVIRLINAILSEAIKETASDIHIETYEKTMSIRFRIDGVLRTILQPNRPRCSST
                     GHSHNSCSWKMAIQ"
     gene            3445..4218
                     /gene="gspK"
                     /locus_tag="OQQ26_003615"
                     /pseudo
     CDS             3445..4218
                     /gene="gspK"
                     /locus_tag="OQQ26_003615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417791.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspK"
     gene            4233..5396
                     /gene="gspL"
                     /locus_tag="OQQ26_003616"
     CDS             4233..5396
                     /gene="gspL"
                     /locus_tag="OQQ26_003616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417792.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HCS1858942.1"
                     /translation="MPESLMVIRSSSTLRKHWEWMTFSADSVSSVHTLTDDLPLESLA
                     DQPGAGNVHLLIPPEGLLYRSLTLPNAKYKLTAQTLQWLAEETLPDNTQDWHWTVVDK
                     QNESVEVIGIQSEKLSRYLERLHTAGLNVTRVLPDGCYLPWEVDSWTLVNQQTSWLIR
                     SAAHAFNELDEHWLQHLAAQFPPENMLCYGVVPHGVAAANPLIQHPEIPSLSLYSADI
                     AFQRYDMLHGVFRKQKTVSKSGKWLARLAVSCLVLAILSFVGSRSIALWHTLKIEDQL
                     QQQQQETWQRYFPQIKRTHNFRFYFKQQLAQQYPEAVPLLYHLQTLLLEHPELQLMEA
                     NYSQKQKSLTLKMSAKSEANIDRFCELTQSWLPMEKTEKDPVSGVWTVRNSGK"
     gene            5393..5854
                     /gene="gspM"
                     /locus_tag="OQQ26_003617"
     CDS             5393..5854
                     /gene="gspM"
                     /locus_tag="OQQ26_003617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417793.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HCS1858943.1"
                     /translation="MIKSWWAEKSTSEKQIVAALAVLSLGVFCWLGVIKPIDTYIAEH
                     QSHAQKIKKDIKWMQDQASTHGLLGHPALTQPIKNILLEEAKRENLAITLENGPDNTL
                     TIHPVTAPLENVSRWLTTAQVTYGIVIEDLQFTLAGNEEITLRHLSFREQQ"
     gene            5854..6531
                     /gene="gspO"
                     /locus_tag="OQQ26_003618"
     CDS             5854..6531
                     /gene="gspO"
                     /locus_tag="OQQ26_003618"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase GspO"
                     /protein_id="HCS1858944.1"
                     /translation="MTMLLPLFILVGFIAGYFVNAIAYHLSPLEDKTALTFRQVLVHF
                     RQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPD
                     KLTLPQLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCIYWGVWLVCHKEGLGYGDFK
                     LLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLG
                     YLVWISY"
     gene            complement(6560..7036)
                     /gene="bfr"
                     /locus_tag="OQQ26_003619"
     CDS             complement(6560..7036)
                     /gene="bfr"
                     /locus_tag="OQQ26_003619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HCS1858945.1"
                     /translation="MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVE
                     YHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLR
                     EAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG"
     gene            complement(7108..7302)
                     /gene="bfd"
                     /locus_tag="OQQ26_003620"
     CDS             complement(7108..7302)
                     /gene="bfd"
                     /locus_tag="OQQ26_003620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HCS1858946.1"
                     /translation="MYVCLCNGISDKKIRQAVRQFSPHSFQQLKKFIPVGNQCGKCVR
                     AAREVMEDELMQLPEFKESA"
     gene            complement(7471..9860)
                     /locus_tag="OQQ26_003621"
                     /pseudo
     CDS             complement(7471..9860)
                     /locus_tag="OQQ26_003621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417797.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase"
BASE COUNT         2712 a         2538 c         2276 g         2643 t
ORIGIN      
        1 gacgtttctc acacaaccag gaaagaataa cttctcttct cgtagacata gaacttcctg
       61 ttttaattat tgattatcct taatcataaa aataatgtat gtatttatta attaaataca
      121 tattactaat ataaataaat tttgcttgat tcatgcaagc ggcattaata ctatttatac
      181 taacgtcaat atacaaccca cccaatctat tttattagaa catacatcgt gcccacacta
      241 cgtttcccct tccatctggc gaatcataat aaagatgctg ccatcaatat attgattata
      301 tttataagca tagggtcgat tatttttaat gtgaattatt tccatacaac tatagttaaa
      361 aatggacaga tcattaatca accaacaaac gcatttcagt ctgagttcag ccttgccgct
      421 ttatggcgta acgaaaatca tgctggggta aaagatgcaa atcccgtggc agttaatcag
      481 gaaacaccta agctctctat agcgcttaat ggcattgtac tcacatcgaa tgatgagact
      541 tcttttgtct taattaatga ggggagcgaa caaaagcgat actccctcaa cgaagccctt
      601 gagtcagcgc cgggaacgtt tattagaaaa ataaataaaa ccagcgttgt gtttgaaact
      661 cacgggcatt acgaaaaagt aactctccat ccagggctac ctgacatcat caagcagcct
      721 gattcagaaa gtcaaaatgt actcgctgat tatattatcg ccacgcctat acgtgatgga
      781 gaacagatat acgggcttcg attgacccct cgtaagggcc tcaatgcatt taccaccagc
      841 ttgctacaac caggggatat cgccctcagg atcaataatc tttcgctgac ccaccctgat
      901 gaggtttcac aggaattaag tttactgcta actcaacaaa gtgctcagtt tacaattcgt
      961 cgcaacggcg taccccgctt gataaatgtt tccgtcgggg aacttacagg aatgaatgga
     1021 cagcgtcatg aaaggactca ataaaatcac ctgctgcttg ctggcagcac tactcatgcc
     1081 ttgtgcaggg cacgctgaga acgaacaata cggcgcgaac ttcaataacg ccgatatccg
     1141 ccagttcgtg gaaatagtgg gtcagcatct tggcaaaacg atcctgatcg acccttcggt
     1201 acagggaacc atttccgtac gcagtaatga tacgtttagc caacaggagt actaccagtt
     1261 ctttttaagt attcttgatc tttacggtta ttccgtgatc acgctggaca atggttttct
     1321 gaaagtggtt cgctcagcta atgtaaaaac atcgccaggg atgattgctg acagttctcg
     1381 tccaggcgta ggtgatgagt tggtcacccg aatcgtaccg cttgagaacg ttcctgctcg
     1441 tgacctggcc cccctgctcc gccagatgat ggatgcgggt agcgtcggta atgttgtgca
     1501 ttatgaaccc tccaacgttc ttattctgac cggtcgtgcc tccaccatta ataaactgat
     1561 tgaagtcata aagcgcgttg atgtcatcgg cacagagaag cagcaaatta ttcatctgga
     1621 atatgcgtca gcggaagatc tcgccgagat tcttaatcaa ttaatcagcg aaagccacgg
     1681 taaaagccag atgccagccc tcctctccgc gaagattgtg gcggataagc gaaccaactc
     1741 tcttatcatc agtggaccgg aaaaagcacg ccagcgcatc acttcattac tgaaaagcct
     1801 tgatgtagaa gagagcgagg aaggaaatac ccgggtctat tacctgaaat atgctaaagc
     1861 cacgaatctg gtggaagtgc taactggtgt ttccgaaaag ctgaaagatg aaaaagggaa
     1921 tacgcgtaag ccttcttcta cttctgcgat ggataatgtg gccattaccg ccgatgaact
     1981 gaccaactcg ttggtcatta ccgctgacca gtccgtctag gagaaactcg ccacagtaat
     2041 tgcgcgtctg gatattcgcc gtgcacaggt gctggttgag gcaatcatcg ttgaagttca
     2101 ggatggaaat ggacttaacc tcggcgtgca atggtcgaat aaaaacgttg gcgcacagca
     2161 atttaccaat accggattac cgatttttaa cgctgcgcaa ggtgtggctg attataaaaa
     2221 gaatggtggg atcaccagcg cgaatcctgc ctgggatatg tttagcgcct acaatggcat
     2281 ggccgcaggc ttcttcaatg gcgactgggg cgtattgttg actgcgctgg ccagtaacaa
     2341 taaaaatgac atcctcgcca ccccgagcat cgtaacgctg gataataaac tcgcgtcctt
     2401 caacgttggc caggatgtgc cggtgctatc cggctctcag accacttctg gggataacgt
     2461 ctttaatacc gtcgaacgca aaacggtggg cacaaaactc aaagtcactc cgcaggtcaa
     2521 tgaaggcgac gcggtactgc tcgaaataga gcaggaagtc tccagcgttg actcttcctc
     2581 taactcgacg ctcggcccga cgtttaatac ccgtactatt caaaacgccg tgctggtcaa
     2641 aaccggtgaa acggtggtcc tgggcggatt gctggatgat ttttctaaag agcaagtgtc
     2701 aaaggttcct ctgcttggcg atattccttt agtggggcaa ctcttccgct atacctccac
     2761 cgagcgcgct aaacgcaacc tgatggtatt tatccgtccg acgattatcc gtgacgatga
     2821 tgtttatcgc tcactgtcaa aagagaaata cacccgttac cgtcaggagc aacaacagcg
     2881 gatcgacggg aaatcaaaag cgctggttgg ctcggaagat ttgccggtgc tggatgaaaa
     2941 cacgttcaac agtcacgccc ctgcgccatc gtcacggtga ggcattcata tgagaattca
     3001 ctcaccgtac cccgccagtt gggcgctggc acaacgaatt ggttatctct attcagaggg
     3061 cgagattatt tatctcgccg atacgccatt cgagcggtta ctcgatattc aacgtcaggt
     3121 tggtcagtgc cagaccatga ccagtttgtc acaggctgat ttcgaagccc ggctggaagc
     3181 ggtgttccat cagaataccg gtgagtcgca acagattgcg caggatatcg atcaatccgt
     3241 cgatcttctc tcgctttcgg aagagatgcc cgcaaatgaa gatctcctga atgaagattc
     3301 agcggcaccg gttatccgct tgatcaatgc tattttgagt gaggccatca aagaaaccgc
     3361 ctccgatatc cacattgaaa cctatgaaaa aacaatgtcg atccgttttc gcatcgacgg
     3421 cgttttgcgg acaattttac agccaaacag accacgttgc agcagtactg ggcacagcca
     3481 caacagttgc agttggaaga tggcaataca gtgaagtggc agttacgcga tgcccagcac
     3541 tgttttaatc tcaatgcgtt agcaaaaatc tctgacgacc cgctggcttc ccctgatttc
     3601 cccgcccagg tattcagtgc gctgctgatt aacgccggta tcgatcgcgg aaacaccgat
     3661 gagatcgtgc aatcaatcgc tgactatatt gatgtcgatg actcaccacg ctttcacggc
     3721 gcagaagata gcttttacca aagccagacg ccgccccggc atagtgccaa tcagatgctt
     3781 tttctgactg gcgaattacg tcagataaaa ggcataaccg aaaacatcta tcagcggctt
     3841 atcccgtatg tctgcgttct cccgaccacg gaacttagca tcaatcttaa tatgctaacg
     3901 gagaacgata ttccgctctt cagagcgtta ttcctcaata acatcacgga tgctgacgct
     3961 cgggtcttat tgcaaaaaag gccgagggaa ggctggctaa ccacggatgc atttctttac
     4021 tgggcgcagc aggatttctc cggtgtgaag ccactggttg ctcaggtgaa aaggcatctc
     4081 tttccctata gccgctattt tacgctgagt acggaaagta tcagcgacga acaatcccag
     4141 ggatggcaaa gccatatttt tttcaaccgt aaacagcaga gcgcccaaat ctatcggcgt
     4201 acgctgcaac tctactaatc ataaggatcg tgatgcctga atcgttgatg gtcatacgtt
     4261 cttcctcgac gctgcgtaag cattgggaat ggatgacgtt ctccgcagat agcgtatctt
     4321 cggtacatac gctcacggac gatcttccgc tggagtcgct ggccgatcag cccggtgccg
     4381 gaaatgttca tcttttgatc ccaccagagg gccttttata tcgttccctc acgctgccca
     4441 acgccaaata caaactcacc gcacaaacat tgcaatggct ggcagaggag acgttacccg
     4501 acaacaccca agactggcac tggacggttg tcgataaaca aaacgaaagt gtcgaggtga
     4561 taggcattca gtcggagaaa ctcagtcgct atcttgagcg tttacatact gccggactca
     4621 acgtgacgcg ggttttgcca gatggctgct atcttccctg ggaagtagat agctggactc
     4681 tggttaacca gcaaacaagc tggctcattc gcagtgccgc acatgccttc aacgaactgg
     4741 atgaacactg gttacagcat cttgctgccc agtttccgcc tgagaatatg ctttgttatg
     4801 gtgtagtacc tcacggcgtt gcagcggcca atccacttat ccagcatcct gaaataccat
     4861 cactgagttt gtattctgcc gatattgcat tccagcgcta tgacatgctg catggtgttt
     4921 ttcgtaaaca gaaaactgta agcaaatcgg gaaaatggct cgcccgcctg gcagtaagct
     4981 gtctcgttct cgccattctt tcttttgttg gcagccggag catcgcgctc tggcatacgc
     5041 ttaagattga agatcaactt cagcaacaac agcaagaaac ctggcaacgt tatttcccgc
     5101 agatcaaacg cacccacaac tttcgttttt actttaagca gcaactcgct cagcaatatc
     5161 ctgaagctgt accgttgctc tatcatttac aaacacttct gctggaacac cctgaactgc
     5221 agttaatgga ggcgaactat agccagaagc aaaagtcgct gaccttaaaa atgagtgcta
     5281 agagtgaagc caatatcgat cgtttctgtg agttaacaca gtcctggctt ccgatggaaa
     5341 aaacagaaaa agatccggtc agtggtgtat ggacagtaag gaactcaggg aaatgattaa
     5401 atcatggtgg gcagaaaaat ccacatcgga aaaacagatc gttgcggcac tggcggttct
     5461 ctcgctcggc gttttttgtt ggcttggggt gataaaaccg atagatacct acattgcaga
     5521 gcatcagtcc cacgcgcaaa aaattaagaa ggacatcaaa tggatgcagg atcaagcgag
     5581 cacccatggt ttactcggtc atcctgcgct tacgcagccc atcaaaaata tccttctcga
     5641 ggaagcaaaa cgtgagaatt tggctatcac gctggaaaac ggcccggaca atactctgac
     5701 aattcatcct gtcacagctc ccctcgaaaa cgtctcccgc tggctcacta cggcacaggt
     5761 aacatacggt attgttattg aagaccttca gtttactctt gccggaaacg aagagatcac
     5821 cctcaggcat ttgtccttca gggagcaaca ataatgacaa tgctactgcc gctcttcatt
     5881 ctggttggtt ttattgcagg ttattttgtt aatgccatcg cctatcacct ctcgccgttg
     5941 gaggataaaa cggcgttaac gtttcgccag gtattggttc atttcaggca aaaaaaatat
     6001 gcctggcatg atacagtgcc cctgatactt tgtgttgctg ctgctatcgc ctgcgccctg
     6061 gcacctttca cgcccatcgt gactggcgca ctctttctct atttctgttt cgtactcacg
     6121 ctcagtgtta ttgattttcg cactcagctc ctgcccgaca aactcacctt accgcagctc
     6181 tggcttggct tggtatttaa tgcgcagtat ggattaattg atttacatga tgcggtttac
     6241 ggcgcggtag cgggctatgg ggtgctgtgg tgtatttact ggggcgtctg gttagtttgt
     6301 cacaaagagg gattgggcta cggtgatttc aagctactgg ccgctgcagg cgcatggtgt
     6361 ggctggcaaa cgttgccaat gatactgctg attgcctcgc tgggtggcat tggttacgcc
     6421 atcgtttcac aacttctgca acgccggact ataaccacta tcgcattcgg cccgtggctt
     6481 gcgctcggca gcatgataaa cctggggtat ctggtctgga tctcttatta accgggaggg
     6541 ttctccctcc cgacacggct caaccttctt cgcggatctg tgcttgcaga taattttgca
     6601 ggcccatctt ctgaatcaga tcaagttccg tttccagcca gtcgatatgg ccttcttcat
     6661 cgcgcaaaat ttctatcatc atatcgcggc tgacgtaatc atgaacgcta tcggcataac
     6721 caattgcctc acgcaaattc ttcgcgccat ccagctcaag tgccagatca gaacgcagca
     6781 tttcctcaac atcttcacca atgttcagtt tgcccaggtc ctgtaagttt ggaagacctt
     6841 ccagaaaaag aatgcgctca atataacgat cggcgtgttt catctcatca atggattcat
     6901 gatactccac atcattgaga cgtttgagac cccagttttt aaacatccgg gcatggagaa
     6961 agtactgatt gattgcgaca agctcatttc ccaacagttt gttgagataa tttataactt
     7021 tagtatcacc tttcattttt tgactccttc gcttccactc tttgaagcgt agaacggctt
     7081 acgagtaagt caaaaaacac actccgttta tgcggactcc ttaaactccg gcaactgcat
     7141 taattcatcc tccatcactt cacgcgcggc ccggacacat ttaccgcact gattgccgac
     7201 cggaataaat ttttttaatt gctggaacga gtgaggggaa aactggcgca cagcctgacg
     7261 aattttttta tcgctgatac cattacaaag acaaacgtac atagagactc ccgtatactt
     7321 tcttcaaaaa taaatgaaaa tagttcttat ttcaattaca gaaagactct tttttaagca
     7381 aagaatagaa atatgaataa aaataatggg ctaccaaaag tagcccattg acaaaaaatg
     7441 cggcgatacc ggaaggtatc gccaacacat ttattgctta gtaaacggcg cgaagatttc
     7501 gctaaatgcg tacttcggtg cctgctcttt agtcagaccg tggaattccg gagacaggtt
     7561 agtgccgccc ggcaggtcgc gcgcgattga ccagatacca accataccga gattacgctt
     7621 ctgcgcatcc tgcatgacca gacgagcatc agagagatag aacacctcgc cctgaacgtc
     7681 gttcacgcca accatcggcg tggtacccat catagcgtca atttctgcat cgctcttgtt
     7741 gggatggagg cctttcaatt gtgaatgcag gttggcaatc gcagacgttg cacacttacc
     7801 gtgaatgttc tggccttcgg tatttgcaga cgacaaatcg cgttaccgta gtccattgtc
     7861 atcacgttca cacccgccag ctcaacacct ttcgctttgg catcgctcag gacattcatc
     7921 ccttccggcg tcagaccagt cggcagaatt ggcaaggtgt accagatagc aatatctttg
     7981 ccttctgact tccatttatc ctgcactttc ttcacagcaa ggttacgacg ttcaatagat
     8041 gcctgatccg caacccaggt gccttcgata tcgaagtcca ggactctgag gttcaggtta
     8101 tcaacgatgt cataataatg ctgcatcaga tcgtctacgt tcttacagga agcagccagc
     8161 ggagcgttgt tagcaccacc gatagacagc atcacatcgc cgccagcctc acgcagagct
     8221 ttgattttgc tgtactgagc gtaattctgc ataccataag cggtacccca tgtcggcaga
     8281 caggtgttcg catctttact caccacaaac gccagcgtga agtggttgac gttatgattc
     8341 ttagccagcg cagccaaatc cgggatcgta ttcagcgtaa agtcaacata cggtgcataa
     8401 acgtgtttcg gccacgcttt cttcggcgta cctacacgtt ctttggttcc ggtccagtca
     8461 acaaaaacac gccacgggtt gctgtcagaa ggagaaactt tctgcacttt actctgagaa
     8521 atgtagttca caccgttaaa gcgaatcagc gtatcgctgg cataaagcgt ttctggatta
     8581 aactgcggcg cattattcag ctcttcgttg ctatagctct gagccttacc taacggcttc
     8641 cacgggcggc tattgctacc ggtggcgttt tggttcgcaa ccagagcagg gttgtcactt
     8701 tgcgtccaga acagcgcttc ataagcctgc ccatcaacaa caacgcgatc acctttcacg
     8761 tacacagtgg atgcggacca tgctttcgcc ggttcgtatt tcttccacgg gttatcgccg
     8821 cccgggacaa agccccatgc gtcttgatcg acagaagttt tataatgtgc atcgttataa
     8881 tctacgatgc tgtccgcgct gtacgctttg ctggcctgga aaccatccgc aacaatgacg
     8941 ccgccgttat caatttcaca ggtagtcggg ttaccgtact gactcaattc cgcagcggta
     9001 gctgtacgca cgagacgcca tgggttattg gagttttcag tgctggtacc ccgtgggcaa
     9061 tctttagacc caacccacca ggcgttcttg taaacattac cattgaaaat aacatggtaa
     9121 atttcgctac cttcctggcc gctccacgct tgcaatgagt aatcgttacc gctatccgct
     9181 ggtgttgatg gctcgttgtt atccggggtt ggggtcaccg gtgtttccgg agttggatca
     9241 accggagtca cagcaccgcc attattatcc ggcttaacgg aacaggagcc agggttacca
     9301 tactggctga tttctgttgc cgttgccgcg cgaacataac gccatgggtt gctggcatca
     9361 ttgcctttcg catcacccgg acagttagaa gaggctaccc accaggcatt tttatatacc
     9421 gcaccattaa agacgacata ccaggtctga ccgccctgct gtttattcca ggcaactaca
     9481 gaagtattag acggaacagt accctgtgct ggtgtagccg aaccgccatt agccggcgta
     9541 ttggatgcag gcgtatttga atttgaagaa gatgagctgc cgctcttttc gcaggaaagt
     9601 gtattgccaa actgactaat ttcagcagct gttgcggtac gctttaaacg ccacgggtta
     9661 gttgcatcat ttgctttcac ttttcccggg caatttgtag aagaaaccca ccaggcattt
     9721 tcataaattt tgccatcgaa aataacctga tatttattac caccttgttg gttattccat
     9781 gcttccattg ccaatgctgg cagagcggaa cacaccagcc ccataccaat catagattta
     9841 gtaaatatat ttaatttcat tataatccct tgtgacgtaa aaactgcaaa acaaaagtcc
     9901 tacgcaggaa ttatttacgt tttacgagaa cccttcaata tgaattaaag tgcggcatta
     9961 aaaataagaa aaaagcctga caaatgaaga attttaaaaa cagaaacatt catatttaaa
    10021 atattaaatt gaattgatat tttaaatatg aataatttat tcgttctgac agtacgaatt
    10081 agatatacag ccaacaaatg caaaaagggc gccgaagcgc cctttttaat tcgaaactaa
    10141 ttaacgtgta attagcccag aactttagc
//
LOCUS       DAJVTL010000144         9992 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.146, whole genome shotgun sequence.
ACCESSION   DAJVTL010000144 DAJVTL010000000
VERSION     DAJVTL010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9992
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.146"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..878)
                     /locus_tag="OQQ26_003622"
     CDS             complement(<1..878)
                     /locus_tag="OQQ26_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001481799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HCS1858947.1"
                     /translation="MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNL
                     TWVRGSLEDTHSLSELVAGASAVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESCF
                     CQRFLFISSLAARHPELSWYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKP
                     LFDWMLRGLLPRLGAPDTQLSFLHVTDFAQAVGQWLSAETVQTQTYELCDGVAGGYDW
                     QRVRQLAADARCGSVRMVGIPLPVLTCLADISTALSRLAGKEPMLTRSKIRELTHADW
                     SASNNRISEDINWFPG"
     gene            complement(875..2563)
                     /locus_tag="OQQ26_003623"
                     /pseudo
     CDS             complement(875..2563)
                     /locus_tag="OQQ26_003623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708792.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
     gene            2958..4100
                     /locus_tag="OQQ26_003624"
     CDS             2958..4100
                     /locus_tag="OQQ26_003624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001327865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HCS1858948.1"
                     /translation="MECDLLMIKIEKVINKNDIKAFIAFPSSLYPDDPNWIPPLFIER
                     SEHLSAKNPGTDHIIWQAWVAKKAGQIVGRITAQIDTLHRERYGEDTGHFGMIDAIDD
                     PQVFAALFGAAEAWLKSQGASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYA
                     AHIEQLGYHKCIDLLAWWMQRTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEEMQIL
                     REIFNSGWQHNWGFVPFTEHEFATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNIN
                     EAIADLNGSLFPFGWAKLLWRLKVSGVRTARVPLMGVRDEYQFSRIGPVIALLLIEAL
                     RDPFARRKIDALEMSWILETNTGMNNMLERIGAEPYKRYRLYEKQI"
     gene            complement(4225..5000)
                     /gene="glcC"
                     /locus_tag="OQQ26_003625"
                     /pseudo
     CDS             complement(4225..5000)
                     /gene="glcC"
                     /locus_tag="OQQ26_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708791.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GlcC"
     gene            5245..6546
                     /gene="glcD"
                     /locus_tag="OQQ26_003626"
                     /pseudo
     CDS             5245..6546
                     /gene="glcD"
                     /locus_tag="OQQ26_003626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417453.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcD"
     gene            6568..7266
                     /gene="glcF"
                     /locus_tag="OQQ26_003627"
                     /pseudo
     CDS             6568..7266
                     /gene="glcF"
                     /locus_tag="OQQ26_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026190.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcF"
     gene            7271..7675
                     /locus_tag="OQQ26_003628"
     CDS             7271..7675
                     /locus_tag="OQQ26_003628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein GlcG"
                     /protein_id="HCS1858949.1"
                     /translation="MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLAL
                     SRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVV
                     VDGQIIGAVGVSGLTGAQDAQVAKAAAAVLAK"
     gene            7697..9869
                     /gene="glcB"
                     /locus_tag="OQQ26_003629"
                     /pseudo
     CDS             7697..9869
                     /gene="glcB"
                     /locus_tag="OQQ26_003629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417450.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase G"
BASE COUNT         2473 a         2501 c         2757 g         2261 t
ORIGIN      
        1 atcccgggaa accaattaat atcttcagaa atacggttat tacttgccga ccagtcggcg
       61 tgggttaatt cacgaatttt cgagcgggtc agcataggtt ctttacctgc caggcgactc
      121 aacgcggtac tgatatccgc aaggcaggtg agtaccggca gaggaatgcc aaccatccgc
      181 acagaaccac aacgggcgtc ggcggcaagc tgtcgtacgc gttgccagtc atagccgcca
      241 gcgacgccat cgcataattc ataggtttgc gtctgtacag tttcggcgct taaccactga
      301 cccactgctt gcgcaaaatc ggtgacgtgc aggaaagaga gttgtgtatc tggcgcacca
      361 agtcgtggca gcaggccgcg cagcatccaa tcaaacagcg gttttaactc tttatcgccg
      421 ggaccataca cggctgtcgg gcgaaaaacg cccagcgtaa tttcgtcagc cattgccgtc
      481 agccgttgtt cggcgacgtg tttggaattt gcgtaccagg agagctcggg atggcgcgcc
      541 gccagcgaag agataaacag aaaacgttgg caaaagcagc tctcttttgc tgcttgcatc
      601 aggcgcagac tgccgtcaac gttacagcgg gtgaaaatct cttctttgtg cccgcgcact
      661 tgtccggcgc aatgaaccac cgcgctggct ccggcaacca gttcgctaag cgaatgtgta
      721 tcttccagcg aaccgcgcac ccaagtaaga ttatcattga cgtgagcgcg ggcagtacgc
      781 gtcaatgcgc gaacgtgaaa gccgcgggcg agcaggttat cgataatata tttaccgata
      841 aaaccggtag cgcccgtcac cgcgacagtt tgattcatgc cagggattcc tgcacatgaa
      901 ggcttgcagc ataagccttc tgataacgtt ttttcgcttc cgcacgggca ggcttgccgg
      961 aggacgttcg gggaatgctg tggggcggca acaggtcgat agccgcggtc acgccaaatt
     1021 cgctttggat ccgtgctgcc agcgcgtgga taagctgccc gcgacgttct tcatcgctga
     1081 tccgacactg gatctgcaaa atgatttttt cctgggcggt aacaaaagca atcgcatcgc
     1141 cagaatgaat ttccggttcc tgttccgcta tatattcaat atcctgcggc cagatattac
     1201 ggccacgaat aataatcaga tctttaatgc gtccggtgac atacagataa ccgtccagca
     1261 gataaccgag atcgccagtg tctaaccagc ccgtcgcggc aatctcgtct tgcgaagcct
     1321 ggtcgccaaa gtaaccgctc atcagactgg gaccggagat gcaaatatgg cctaccacac
     1381 gttccgcgac cggcatacct gcttcattgc ggatttcaat accatgttcc ggcaacgctt
     1441 tgccgcagtt gacgaaagtc gatacggcgc gtgtctctgc acccggcgcg acggctttac
     1501 cctgatattc gaggatgtcg cgatccactt cgttaaccac aaccccggag gcttcatcag
     1561 agaagctgac agccagcgca ttttctgcca gtccgtagca cggcatgaaa gttttattgt
     1621 caaagttaac ctgacggaaa cattcagcga attgatggag ttgttctgcg gagatgggtt
     1681 ctgcaccaat accagcgacg cgccagcagg aaagatccag ttcagcgaga tctttttcat
     1741 tcacgcggcg ctggcacaat tcatagccaa acggcggcgc aacggaaacg gtgccgcgat
     1801 ttttactgat caatttaagc cattgcagag gacgcatggc aaaatcctga gtgcgcaaat
     1861 aatctactga aagttgcgtg gcgacgggga tcaggagaaa gccgaccagt cccatatcat
     1921 ggtagaaagg cagccaggag acgcagcggt cgccagggcg taatttaatg ccgtcgtggc
     1981 ttatagcacg tagattagcc atcacttcgc gatgggtgat aatgacgcca cggggaaaac
     2041 gggtgctgcc ggaggtgtac tggaggtagg cgatatcgtt cggaactgga cgctggagcg
     2101 caacatcggc ttccggtaat gccttaaact aggcgtggct taaaacatgt aattcggggt
     2161 tgtcatgcgt cgcggcattg accagtggca accactcatc accagtgata atggctgcgg
     2221 gctggcaact tgccagtaaa ccctgcaatt tggcgctcca ggaatctcgc tgaccaacgc
     2281 ccattggaat cgccaacggg acggcgacta agccggcata ctggcaggca aaaaaagcct
     2341 ctacgaaccc gctacttgtt tcggcaatca gtgccacgcg atcgcctttt ttcaggttca
     2401 gcgataacaa ccgcttcgca ccagcttcgg cacgtgcttt taacgactga tattccagtt
     2461 gatcttcaag ttggcaacgt ctgtcataaa aattcattcc ggcgctactc agagcggcgt
     2521 agtccaaagc atcaaccagc gttggaaaat cggcatagcg cataggtagg gaatgcgtaa
     2581 agattttatt agacatatac accacgaaaa aattggatat caaaaataaa atgacaataa
     2641 tgcggtggat tatataggca taaaagataa atgagatagt attttcatca gtgtgaaaat
     2701 gaacattgat ttaaataata ggtttggttt tgttgtgaat gatatttaat ttatgaatat
     2761 attaagaaga agccttgtcc ggtcgcctta aatcgacaaa aggcattgtg gcgcttctgc
     2821 gtagtcgctg accctatcgt aatcattaat aaatactatt tattcgtcgt ttgtattcat
     2881 tgtgttgatt attaagatgc cgttcgttgc tgttgcaacc tgtttttcac cgttaattat
     2941 ttgttaccca cagaactatg gaatgcgatc tgctgatgat caaaattgaa aaagtaatta
     3001 ataaaaatga cattaaggca tttatcgctt ttccgtcatc actttatccc gacgatccaa
     3061 actggatacc ccctttattc attgaacgca gtgagcattt gtctgcgaag aatccgggga
     3121 cggaccatat catctggcag gcgtgggtgg caaaaaaagc ggggcagata gttgggcgta
     3181 ttaccgcgca aatcgatacc ttacaccgcg agcgttacgg cgaagatacc ggtcatttcg
     3241 gcatgattga cgccattgat gatccgcagg tttttgccgc gttgtttggc gcagcggaag
     3301 cgtggttgaa gtcacaaggt gcaagtaaga tcagcgggcc tttcagcctg aatatcaatc
     3361 aggaaagcgg attactgatt gaaggttttg acacaccacc ctgtgcgatg atgccacacg
     3421 gcaaaccgtg gtatgccgcg catattgaac aactgggtta tcacaaatgc attgatttac
     3481 tggcgtggtg gatgcagcga accgatctca ctttctctcc ggcgctaaaa aaactgatgg
     3541 atcaggtgcg caaaaaggtg accattcgct gcatcaatcg tcagcggttt gccgaagaga
     3601 tgcagatcct gcgtgagatt ttcaactctg gctggcagca caactgggga tttgtgccgt
     3661 ttaccgaaca tgaattcgcg accatgggcg accaacttaa atatctggtg ccggacgata
     3721 tgatctacat cgctgagatt gattctgcac cctgcgcgtt tattgtcggc ttgcctaaca
     3781 tcaacgaggc gattgccgat ctgaacggat cgctctttcc cttcggctgg gcaaaattgc
     3841 tgtggcgttt gaaagtcagc ggtgtgcgaa ctgcgcgagt accgctgatg ggcgtgcgcg
     3901 acgagtatca gttcagccgc atcggcccgg tgattgcgct gttattgatt gaagccttac
     3961 gcgatccgtt tgcccgcagg aagatcgatg cgctggagat gtcatggatc ctcgaaacca
     4021 atacaggtat gaataacatg ctggaacgca ttggggcgga gccgtacaag cgttaccgat
     4081 tgtatgaaaa gcaaatttaa taccagatcc tgtttagcgc aggggcggtc attcgggaga
     4141 gggtatagat gaacagattt aacaccagat cctgttaagt gcaggggcgg tcccctcgcc
     4201 ttggggatag ggggaaaact ctgctcacat tcccaccttg ttcatctcca gcggcaccgc
     4261 cgagcgaatc aaatggtggc cttccagctc aatatcgtgg agattctttt tcacggtccg
     4321 tacatgatcg cgcgctgcgc gctgagcgac gtgcggcagc cgctgcaaca ccgcgttgta
     4381 gatccgcgca tgctggcgat ctgctttttt tgctgtggtc gatggtagag attatttacg
     4441 ctggcaaaca ctgaattaaa catcagatcg gtcaatgatt gcagcgtaaa caccagcacc
     4501 tgattgtgag aagcctgaca aatggcgaga tggaaagcgt gatccaactg cgcatgttcg
     4561 atcagcgaaa tctctttgtt gttctcactg gcggcgagca ttttttcata acagcgggtt
     4621 atcacaacaa aatcagcctg cgttcccagc gttcccagcg ttgccgccag ccttgccgat
     4681 tcgccctcca gtaatgcgcg aacgtcgagc agatcgtaca gcgttcgcgg ctgcgtactg
     4741 aacagatgga tcagcgggct ggtgtcctgc acccgattaa gccgtgcgac acgagaatcg
     4801 cgaccctgcg ccgtttcaat aatcccgcgc ccgcgcagca cggtcagccc ttcacgcagt
     4861 gcggagcgtg agaagccgag cttttcacac agtcgacgtt ccgagggaag cggctgaccg
     4921 accttcagta cgccgtcgat aattaaccgt tcgatactct ctgcaaccac ttcgcaaata
     4981 gggcgacgtt catctttcat tcccggacct cgtgcacagg taggaccaat ttttctgttc
     5041 ttaactcgca aaacacgcac atcacgtaag tgattatgtt acatcaattt aacattaagt
     5101 taacctagac aaggtcacag agctggaaaa aaaatggtct gaccggtagc taaagagata
     5161 gacgaaaagc ccgcttaata actgttcaca gaagcagcgc gcaaaaatca gctgccacac
     5221 aacacaacaa agcgaagcct actcatgagc atcttgtacg aagagcgtct tgatggcgct
     5281 ttacccgatg tcgaccgcac atcggtactg atggcactgc gtgagcatgt ccctggactt
     5341 gagatcctgc ataccgatga ggagatcatt ccttacgagt gtgacgggtt gagcgcgtat
     5401 cgcacgcgtc cattactggt tgttctgcct aagcaaatgg aacaggtgac agcgattctg
     5461 gctgtctgcc atcgtctgcg tgtaccggtg gtgacccgtg gtgcaggcac cgggctttct
     5521 ggtggcgcgc tgccgctgga aaaaggtgtg ttgttggtga tggcgcgctt taaagagatc
     5581 ctcgacatta accccgttgg tcgccgcgcg cgcgtgcagc cgggcgtacg taacctggcg
     5641 atctcccagg ccgttgcgcc gcataatctc tattacgcgc cggatccttc ctcacaaatc
     5701 gcctgttcaa ttggcggcaa tgtggcggaa aatgccggtg gcgtccactg cctgaaatat
     5761 ggtctgaccg tacataacct gctgaaaatt gaagtgcaaa cgctggacgg cgaggcgctg
     5821 acgctgggat cggacgcgct ggattcacct ggttttgacc tgctggcgct gttcaccgga
     5881 tcggaaggta tgctcggcgt gaccaccgaa gtgacggtaa aactgctgcc gaagccgccc
     5941 gtggcgcggg ttctgttagc cagctttgac tcggtagaaa aagccggact tgcggttggt
     6001 gacatcatcg ccaatggcat tatccccggc gggctggaga tgatggataa cctgtcgatc
     6061 cgcgcggcgg aagattttat tcatgccggt tatcccgtcg acgccgaagc gattttgtta
     6121 tgcgaactgg acggcgtgga gtctgacgta caggaagact gcgagcgggt taacgacatc
     6181 ttgttgaaag cgggcgcgac tgacgtccgt ctggcacagg acgaagcaga gcgcgtacgt
     6241 ttctgggccg gtcgcaaaaa tgcgttcccg gcggtaggac gtatctcccc ggattactac
     6301 tgcatggatg gcaccatccc gcgtcgcgcc ctgcctggcg tactggaagg cattgcccgt
     6361 ttatcgcagc aatatgattt acgtgttgcc aacgtctttc atgccggaga tggcaacatg
     6421 cacccgttaa tccttttcga tgccaacgaa cccggtgaat ttgcccgcgc ggaagagctg
     6481 ggcgggaaga tcctcgaact ctgcgttgaa gttggcggca gcatcagtgg ggaacatggc
     6541 atcgggtgag aaaaaatcaa tcaaatgtgc gcccagccta cgctttcgcc caacaccaac
     6601 gcggcaactg cgcgagtgct ggatcgtctg gggatcagcg tcatgtcagc taacgaagca
     6661 ggctgttgtg gcgcggtgga ctatcatctt aatgcgcagg agaaagggct ggcacgggcg
     6721 cgcaataata ttgatgcttg gtggcccgcg attgaagcag gtgccgaggc aattttgcaa
     6781 accgccagcg gttgcggcgc gtttgtcaaa gagtacgggc agatgctgaa aaacgatgcg
     6841 ttatatgccg ataaagcgcg tcaggtcagt gaactggcgg tcgatttagt cgagcttctg
     6901 cgcgaggaac cgctggaaaa actggcaatt cgcggcgata aaaaactggc cttccactgc
     6961 ccgtgtaccc tacaacatgc gcaaaagctg aacggcgaag tggaaaaagt gttgcttcgt
     7021 cttggattta ccttaacgga cgttcccgac agccatctgt gctgcggttc agcgggaaca
     7081 tatgcgttaa cgcatcccga tctggcacgc cagctgcggg ataacaaaat gaatgcgctg
     7141 gaaagcggca aaccggaaat gatcgtcacc gccaacattg gttgccagac gcatctggcg
     7201 agcgccggtc gtacctctgt gcgtcactgg attgaaattg tagaacaaac ccttgaaaag
     7261 gaataacaaa atgaaaacta aagtcattct tagccagcaa atggcgagtg caattattgc
     7321 cgcaggtcag gaagaggcgc agaaaaataa ctggtctgtt tccattgctg ttgccgatga
     7381 cggcggtcat ctgctggcgt taagtcgcat ggacgattgc gcgccgattg cggcttacat
     7441 ctcccaggag aaagcgcgta ccgccgcgct ggggcgtcgt gaaactaagg gctatgaaga
     7501 gatggtgaac aacggacgta ccgcgttcgt gactgcaccg ttattaacgt cgctggaagg
     7561 cggcgtaccg gttgttgttg atgggcaaat tattggtgcc gtgggcgttt ctggtttaac
     7621 cggagcacag gatgcgcagg tcgcgaaagc ggcagcagcg gtgttggcga aataagcgaa
     7681 aacgaggaga taaacaatga gtcaaaccat aacctagggc cgtttacgca ttgacgccaa
     7741 ttttaaacgt tttgtggatg aagaagtttt accgggaaca gggctggacg ctgcggcgtt
     7801 ctggcgcaat tttgatgaga tcgttcatga tctggcacca gaaaatcgtc agttgctggc
     7861 agaacgcgat cgcattcagg cagcgcttga tgagtggcat cgcagcaatc cggggccggt
     7921 aaaagataaa gcggcctata aatctttcct gcgtgaactg ggctacctgg tgccgcaacc
     7981 ggagcgcgtg acggtggaaa ccacgggcat tgacagcgaa atcaccagcc aggcggggcc
     8041 acagctggtg gttccggcaa tgaacgcccg ctacgcgctg aacgcggcga acgctcgctg
     8101 gggctcactg tacgatgcgt tatacggcag cgacatcatc ccgcaggaag gggcgatggt
     8161 cagcggctac gatccgcaac gcggtgagca ggttatcgcc tgggttcggc gtttcctcga
     8221 tgaatctcta ccgctgaaaa acggcagcta tcaggatgtg gtggcgttta aggtggtcga
     8281 taaacaatta cgcatccagt tgaaaaatgg taaagaaacc acgttacgta ccccggcgca
     8341 gtttgtcggt taccgtggcg atgccgctgc gccgacctgc attttgctga aaaataacgg
     8401 cctgcatatt gaactgcaaa ttgatgccaa cgggcggatt ggcaaagacg atccggcgca
     8461 catcaacgat gttatcgtcg aagcggccat cagtaccatt ctcgactgcg aagattcggt
     8521 cgcggcggtt gatgcggaag ataaaatcct gctgtaccag caatctgctg ggcctgatgc
     8581 aggggactct gcaagagaaa atggagaaaa acggtcgaca aatcgtgcgt aaactgaatg
     8641 acgatcgtca ttacaccgcc gccgatggct ctgaaatttc tctgcacgga cgctcgctgc
     8701 tgtttatccg caacgtgggt catttgatga ccattcctgt gatttgggac agcgaaggca
     8761 atgaaatccc ggaaggcatt cttgatggcg tcatgactgg cgcgattgcc ctctatgatt
     8821 taaaagtgca gaaaaactcg cgcactggca gcgtctatat tgtgaaaccg aaaatgcacg
     8881 gtccgcagga agtggcgttc gccaacaaac tgtttacccg cattgagaca atgctcggta
     8941 tggcaccgaa taccctgaaa atgggcatta tggatgaaga acgtcggacc tcgctgaact
     9001 tgcgtagctg tatcgctcag gcgcgcaacc gcgtggcgtt catcaatacc ggtttcctcg
     9061 accgtaccgg cgatgaaatg cattcggtga tggaagctgg cccgatgctg cgtaaaaatc
     9121 agatgaaatc gacgccgtgg atcaaagcct acgagcgtaa taacgtgctt tccggcctgt
     9181 tctgtgggct gcgcggtaaa gcgcaaatcg gtaaaggcat gtgggcaatg ccggacctga
     9241 tggcagacat gtacagccag aagggcgacc aactgcgtgc cggggcaaac acagcctggg
     9301 ttccgtcgcc aactgccgct acgctccatg cgatgcacta ccaccaaacc aacgtacaga
     9361 gcgtgcaagc caacattgcc cagaccgagt tcaatgctga atttgaaccg ctgctggacg
     9421 atctgctgac tattccggtt gctgaaaacg ctaactggtc ggtggaagag atccaacaag
     9481 agctggataa caacgtgcag gggattctgg ggtacgtggt gcgctgggtg gagcagggga
     9541 ttggttgttc aaaagtgccg gatattcaca atgtggcgct gatggaagac cgcgcaacgc
     9601 tgcgtatctc cagccagcat atcgccaact ggttacgtca cggtattctg accaaagaac
     9661 aggtgcaggc gtcgctggaa aatatggcga aagtggttga tcagcaaaac gctgacgatc
     9721 cggcttatcg tccgatggcg gggaatttcg ctaactcgtg tgcttttaaa gctgccagcg
     9781 atttgatctt cctcggcgtg aaacagccaa acggttatac cgaaccgtta ttacacgcct
     9841 ggcgtttacg cgaaaaagaa agtcattaat agcgtcaaaa aagccccggc aagttttatt
     9901 gtcggggcta tgatagtaac tgcggtagta catttatccc ggaaataacc ggagcgatta
     9961 tcagggttta acaatattaa atccccgtag cg
//
LOCUS       DAJVTL010000145         9806 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.147, whole genome shotgun sequence.
ACCESSION   DAJVTL010000145 DAJVTL010000000
VERSION     DAJVTL010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9806
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.147"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(183..1376)
                     /locus_tag="OQQ26_003630"
     CDS             complement(183..1376)
                     /locus_tag="OQQ26_003630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1858950.1"
                     /translation="MSPGIEDTPQKPLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTN
                     LSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPVVLWALGGYGISFTLLGLGSVLM
                     ATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRIAALATISSGLSC
                     GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGIPPQPTPECKSVSLKRDC
                     LPYLLCAILLAAAVSMMQLGLSPALTRQFATDTTAISQQVAWLLGLSAVAALIAQFGV
                     LRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFGAALATPAYQLLLND
                     KLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWH
                     YRTIK"
     gene            1512..3236
                     /gene="iucA"
                     /locus_tag="OQQ26_003631"
     CDS             1512..3236
                     /gene="iucA"
                     /locus_tag="OQQ26_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucA"
                     /protein_id="HCS1858951.1"
                     /translation="MTLPSEKTATDVAAQCFLNALIRETTDWKLTEYPPDELLIPLDE
                     QKSLHFRVAYFSPTQHHRFAFPARLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLC
                     ETFHQRVLESHVHTQQAIDARHDWAALREKALNFGEAEQALLTGHAFHPAPKSHEPFN
                     RREAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDN
                     QWLFPLHPWQGEYLLQQGWCQALVAKGLIKDLGEAGTSWLPTTSSRSLYCATSRDMIK
                     FSLSVRLTNSIRTLSVKEVKRGMRLARLAQTDGWQMLQVRFPTFRVMQEDGWAGLLDL
                     NGNIMQESLFALRENLLVDQPKSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITV
                     QQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSA
                     FMPHATDWLDSIGEAQAENIFTHEQLLRYFPYYLLVNSTFAVTAALGAAGLDSESNLM
                     ARVRASLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFA
                     NPLQAQEV"
     gene            3237..4184
                     /gene="iucB"
                     /locus_tag="OQQ26_003632"
     CDS             3237..4184
                     /gene="iucB"
                     /locus_tag="OQQ26_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(6)-hydroxylysine O-acetyltransferase"
                     /protein_id="HCS1858952.1"
                     /translation="MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGW
                     LCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSP
                     ANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW
                     MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
                     RHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQR
                     LFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL"
     gene            4184..5926
                     /gene="iucC"
                     /locus_tag="OQQ26_003633"
     CDS             4184..5926
                     /gene="iucC"
                     /locus_tag="OQQ26_003633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucC"
                     /protein_id="HCS1858953.1"
                     /translation="MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGA
                     QWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
                     LLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
                     TNTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPL
                     PVHPWQWQQKIATDFIADFAEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPL
                     TIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYA
                     ALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLD
                     AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLV
                     KEAFPEMDSLPQEVRDVTSRLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQ
                     LLAAVLSDYMNKHPQMAERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEN
                     LQNPLWLVTQEYES"
     gene            5923..7260
                     /gene="iucD"
                     /locus_tag="OQQ26_003634"
     CDS             5923..7260
                     /gene="iucD"
                     /locus_tag="OQQ26_003634"
                     /EC_number="1.14.13.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent L-lysine N(6)-monooxygenase"
                     /protein_id="HCS1858954.1"
                     /translation="MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHP
                     GMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDY
                     LRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFAHNICLGTGKQPYLPPCVK
                     HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRN
                     NFNALDEAAFADEYFTPEYISGFSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELY
                     HRFEVLRKPRNIRLLPSRSVTTLESSGPGWRLLMEHHLDQGRESLESDVVIFATGYRS
                     ALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSL
                     MAWRSARILNRVLGRDLFDLSMPPALIQWRSDSRKKPQPEAASLTHYTANIQE"
     gene            7266..9461
                     /gene="iutA"
                     /locus_tag="OQQ26_003635"
     CDS             7266..9461
                     /gene="iutA"
                     /locus_tag="OQQ26_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric aerobactin receptor IutA"
                     /protein_id="HCS1858955.1"
                     /translation="MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAE
                     MAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLID
                     GVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME
                     FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQ
                     TGLQHSNRLDIMGTGTLNIDESRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPY
                     VSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLRYYPFPTVNANKQAT
                     AFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLN
                     NHKIYTTGRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQK
                     IAAGKAISADAIPGGSVDYDNFLFNAGLLMHITERQQAWFNFSQGVALPDPGKYYGRG
                     IYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYSLSNKSVE
                     RNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKE
                     SSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSF
                     SVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
BASE COUNT         2353 a         2531 c         2607 g         2315 t
ORIGIN      
        1 gtaaacggga tcataggttg ttgcacgaaa gaatcatgga gattacaccg cagcaactgg
       61 ttgaattcac tatacctgat gggcgggggc agcaagccag aacactgcct aacatgcttt
      121 catcagacgc aggtcctctc tcatatcctc tgatttactc cagtaaggtg atgatcatat
      181 ctttatttga tagtacggta atgccagata aatacagaca caatggtaaa taatatagtt
      241 gcaaataatg ctgccataat cagcgcgatt gcgacacctg ttttcgatac cagcggcacc
      301 agcaaagcgc acagtccata gccaagtgtg tgactggtag cgagccagcc cgcgcctgcg
      361 ccatcagcca gcttatcatt cagtagaagt tgataagcgg gtgttgccag agctgctcca
      421 aatgacagca ctgcacagcc cgggtaaaac aaccatagct gttcggagag catgatagcc
      481 agaccaccac tcatcaacac tccggcactc aggagcaggg ccaccggagt caggcgctgc
      541 ggacggagta ccccgaactg cgcgataagc gcagctactg cggacagacc caacagccaa
      601 gccacctgtt ggctaatggc ggtggtatcc gtggcgaact ggcgagtaag ggcaggcgaa
      661 agtccaagct gcatcatgct caccgccgca gccagtaata ttgcgcaaag cagataaggc
      721 agacaatccc gcttcagact gacgctcttg cactccggtg tgggctgtgg tggtatgccg
      781 ggcaaccgca gcagcatcag cagcgccagc actggggctg ccatcagcag ccccagtggc
      841 gccagaggat gaatggccag cattgctgcc gcgcacagcg gcccgaatag cctgccgcaa
      901 ctcaggccgg agctgatggt tgccagagcg gctatgcgat tcccttctcc agctctctgc
      961 aatgcccaga cctgacaggc tggcaccatt gccgacacgg tcagcccgta ggcgatccgg
     1021 gcgatgatta atattcccag tcccaccgct gttgttatgg cgctggtagc catcagcacg
     1081 cttcccagcc ctagcagggt aaagcttatg ccatatcctc ccagagccca caacaccaca
     1141 ggtttactgc cagtacggga aatttgcttt ccccaccacg gggacgatgg cagaaacagc
     1201 attgagccaa gcatcagcag ggcagcccat acagacagac tcagatttgt ctgtatgacc
     1261 agaacaggga gcacaaccag cagaccgttc tgtccgatac cgagaagccc ggcactgaac
     1321 gcaagtggcc agcaggacag tggtttttgg ggcgtatctt cgatccctgg tgacattata
     1381 atgtttcaac tccatgtatt aattgtgttt atttgtaaaa ttaatttatc tgacaataac
     1441 atttattgtt gataatgaga atcattattg acataattgt tattatttta ctgtgtggga
     1501 gctgtttgac tatgaccctg ccctctgaaa aaacagccac agatgtggct gcgcagtgct
     1561 tcctgaatgc actgattcgt gaaaccacag actggaaact gacagaatac ccgccagacg
     1621 aattgctcat cccgctggat gagcagaaat cgctccattt cagagtggct tatttctccc
     1681 caacccagca tcaccgcttt gcatttcctg cacgtctggt cacggcatca ggcagttatc
     1741 ctgtcgactt taccactctc tcccggctta ttattgataa gctacgccat caactgtttc
     1801 tgcccgttcc cctctgcgaa actttccacc agcgcgtgct ggaaagccat gtccatacgc
     1861 aacaggcaat tgatgcccgt catgactggg ccgctctgcg tgaaaaagcg ttgaattttg
     1921 gcgaggctga gcaggcgctg ctgacaggac acgctttcca ccctgcgcct aagtctcatg
     1981 aaccgtttaa ccggcgggag gctgaacgct acctgcctga tatggcaccc cacttcccac
     2041 tgcggtggtt ttcggtggat aaaacgcaaa tcgccggtga aagtttgcat ctcaaccttc
     2101 aacagcggct gacgcgattt gccgcagaga atgcgcctca gttactcaac gaattaagtg
     2161 acaaccaatg gctgttcccg ttgcacccgt ggcaggggga atatcttttg cagcaggggt
     2221 ggtgccaggc acttgttgct aaagggctga ttaaagactt aggtgaggcc ggcacgtcgt
     2281 ggctgccgac cacctcttcc cgttccctct actgtgccac cagccgcgat atgatcaagt
     2341 tctccctgag cgtacggctg accaactcca tccgtactct gtccgtgaaa gaagtgaagc
     2401 gtgggatgcg cctggcacgc ctggctcaaa ccgacggctg gcagatgcta caggtccgct
     2461 tcccgacttt ccgggtaatg caggaggatg gttgggccgg gctgctcgat cttaacggca
     2521 acatcatgca ggaaagtctg tttgccctgc gtgaaaatct gctggtggat cagccgaaaa
     2581 gccagactaa cgtactggtc tccctgactc aggccgcacc tgatggcggt gattcgctgc
     2641 tggtttcggc ggtaaaacgc ctgagcgatc gcctcggtat cactgtgcaa caggccgccc
     2701 atgcatgggt cgatgcatac tgtcagcaag tgctaaagcc gctgtttacg gctgaagcgg
     2761 attacggcct ggtgctgctg gcgcatcagc aaaatattct tgtccagatg cttggggatc
     2821 tgccggtcgg atttatttac cgtgactgtc agggcagcgc ttttatgcct cacgcgacag
     2881 actggctcga ttctattggc gaggcgcagg cggaaaatat tttcacccat gagcagttgc
     2941 tgcgctattt cccttattac ctgctggtta actccacttt tgctgtgacc gctgcgctgg
     3001 gggctgccgg gctggacagc gaatcgaatc tgatggctcg tgtacgagca tcgctggctg
     3061 aagtgcgtga tcaggtgact cataaaacct gtctcaacta cgtgctggaa agtccgtact
     3121 ggaacgtaaa aggtaacttt ttctgttatc tgaacgatca taacgagaac accattgttg
     3181 acccttcggt gatctatttc gatttcgcta acccgctgca ggctcaggag gtctgaatgt
     3241 ctgaggcaaa cattattcac agcagatatg gactgcgctg tgaaaaactc gacaagcccc
     3301 tgaatcttgg ctggggactg gacaatagcg cggtgttgca ctgtcccggg gagctgccga
     3361 cagggtggct gtgcgatgcg ctggatcaga tatttatcgc cgcaccacaa ctgtcagcag
     3421 tggctctccc ctgggccgaa tggcgtgagg agccacaggc gctgacgctt tttgggcagg
     3481 taaaaagcga cattatccat cgtaccgcct tctggcagtt accgttatgg ttgagttcac
     3541 cggcaaaccg ggcctccggt gaaatggttt ttgatgcaga gcgtgagatt tatttcccgc
     3601 agcgcccacc ccgtccacag ggtgaggttt accgccgtta cgatccacgt attcgcagga
     3661 tgctgagttt ccgcattgcc gatcccgttt ctgatgcaga acgtttcacc cgctggatga
     3721 atgatccgcg cgttgagtat ttctgggagc aaagtggctc actggaggta cagaccgcct
     3781 atctggagcg ccagctcacc ggtaaacatg cattcccgct gattgggtgc ttcgacgatc
     3841 ggccattcag ctatttcgaa atctactggg cggcggaaga ccgcattggt cgtcactatt
     3901 cgtggcagcc ctttgaccgt ggcctgcatc tgctggttgg tgaacagcaa tggcgcgggg
     3961 cccactatgt gcaaagctgg ctgcgcgggc tgacacatta cctgctgctg gatgagcccc
     4021 gtacgcagcg cacagtactg gagccacgca ccgataacca gcgcctgttc cgccatcttg
     4081 agcctgcggg ataccggaca attaaagagt tcgacttccc acataagcgc tcgcgcatgg
     4141 tgatggcgga tcgtcatcac ttcttcacgg aggtcggtct gtaatgaatc acaaggactg
     4201 ggattttgtt aaccgtcggc tggtggcaaa aatgttgtct gagatggagt atgagcaggt
     4261 tttccacgcg gaatctcagg gcgatgacca ctactgcatt aacctgccgg gagcacaatg
     4321 gcgcttcatc gctgaacgtg gtatctgggg ctggctgtgg attgatgctc aaacgttgcg
     4381 ctgcacggac gaaccagtac tggcgcagac gctgctgatg cagctaaagc cggtgctgtc
     4441 aatgagtgat gccactgttg cagagcatat gcaggatttg tatgccacgc tactgggcga
     4501 cctgcaactg ctgaaggccc gtcgcggact gagtgccagt gacctgatta atcttgatgc
     4561 cgatcgtctg caatgcctgc tgagcggtca tcctaaattc gtttttaata aaggtcgccg
     4621 tggctggggc aaagaggcgc tggaacgata tgcgccagag tataccaaca ccttcagact
     4681 gcactggctg gcggtaaaac gtgaacatat gatctggcgc tgcgataacg atctggatat
     4741 tcagcagttg ttgactgccg caatggatcc gcaggagttt acacgcttca gtcaggtctg
     4801 gcaggaaaac gggctggatc acaactggct gccgctgccg gtacatccgt ggcagtggca
     4861 gcaaaaaatc gccacagact tcatcgctga ttttgccgaa ggcaggatgg tgtctctcgg
     4921 cgagtttggc gaccagtggc tcgcccagca gtcgctgcgt accctgacca acgccagccg
     4981 ccggggaggg ctggatatca agctgccgct gaccatctac aacacctcat gctaccgggg
     5041 gatccctggc agatatatcg ctgccggacc actggcttca cgctggctgc aacaggtttt
     5101 tgcgaccgac gccaccctgg tgcaaagcgg cgcagtgatc cttggtgaac cggctgcagg
     5161 ctatgtgtcc catgaaggct atgccgcgct tgcccgggct ccctatcgct accaggaaat
     5221 gcttggtgtt atctggcggg agaatccgtg ccgctggctg aaaccggatg aaagtcctgt
     5281 tctgatggca acactgatgg agtgcgacga aaacaatcag ccgctggcag gcgcatatat
     5341 cgaccgctcc ggactggacg ctgaaacctg gcttacgcaa ttgttccggg tggttgtggt
     5401 tccgctgtat cacctgcttt gccgctacgg tgtcgcgctt attgcacacg gacaaaatat
     5461 aacgctcgcc atgaaagagg gggtaccaca gcgtgttctg ctgaaagact tccagggcga
     5521 tatgcggctg gtgaaagaag cgtttcccga aatggactct ttgcctcagg aggtgcgtga
     5581 tgtcacatcc cgtctgagtg cggactactt aatccatgat ttgcagacgg gtcacttcgt
     5641 gacagtactg cgttttattt cgccactgat ggttcgtctt ggcgtacctg aaaggcgatt
     5701 ttatcaactg ctggcagcag tgttgagtga ttacatgaac aaacatccac aaatggcaga
     5761 gcgttttgcg cttttctcac tcttcaggcc acaaatcatt cgcgtggtgc tgaacccggt
     5821 aaaactgact tggccggacc tggatggcgg cagtcgcatg ctgccgaatt accttgagaa
     5881 tctgcaaaat ccgctgtggc tggtaactca ggaatatgaa tcatgaaaaa aagtgtcgat
     5941 tttattggtg tcgggacagg gccatttaat ctcagcattg ctgcattgtc acatcagatc
     6001 gaagaactga actgtctctt ctttgacgaa catcctcatt tttcctggca tccgggtatg
     6061 ctggtaccgg attgtcatat gcagaccgtc tttctgaaag atctggtcag tgcagttgca
     6121 cctacaaatc cctacagctt tgttaactat ctggtgaagc acaaaaagtt ctatcgcttc
     6181 cttacaagca ggctacgtac agtatcccgt gaagagtttt ctgactatct ccgctgggct
     6241 gctgaagata tgaataacct gtatttcagt cataccgttg aaaatattga tttcgacaaa
     6301 aaaagtcgat tgtttctggt tcagaccagt cggggagaat attttgccca caatatctgc
     6361 cttggtacag gaaaacaacc ttatttacca ccctgtgtga agcatgtgac acaatcctgt
     6421 ttccatgcca gtgaaatgaa tcttcgtcgg ccggacctga gtggaaaacg gataaccgtg
     6481 gttggtggag gacagagtgg tgcagacctg ttccttaatg cattacgcgg ggaatgggga
     6541 gaagcggcgg aaataaactg ggtctcacgg cgtaataatt ttaacgcact ggatgaggct
     6601 gcttttgctg atgagtattt tacacctgaa tatatttcag gcttctccgg actgaaggaa
     6661 gatattcgcc atcagttact ggatgagcag aaaatgacat cggatggcat cactgccgat
     6721 tctttactga ccatttatcg tgagttgtac caccgttttg aagttctgag aaaaccaaga
     6781 aatatccgtc tgctacccag tcgctcggta acaactctgg aaagtagtgg tccgggctgg
     6841 aggttattga tggaacatca tctggatcag ggcagagaga gcctggaaag tgatgtggtg
     6901 attttcgcca caggttaccg ttctgcattg ccacaaatac ttccctcact gatgcccttg
     6961 atcaccatgc acgataagaa cacctttaaa gtgcgtgatg acttcactct ggaatggagt
     7021 ggcccgaaag aaaataacat ctttgcggtc aacgccagca tgcaaactca tggcatcgcc
     7081 gaaccccagc tcagcctgat ggcctggcga tctgcacgta ttcttaatcg cgtactgggg
     7141 cgtgatttat tcgatctcag tatgccgccc gcactgattc agtggcgcag cgacagccgg
     7201 aaaaaaccgc agccggaggc tgcttcttta actcactata cagcaaatat tcaggaataa
     7261 cgatgatgcg caaaaagtat atgccccggg ctcttggtcc gctgcttctt gtcgtgctgt
     7321 caccagctgt cgcccagcaa aacgatgata atgagatcat agtgtctgcc agccgcagca
     7381 atcgaactgt agcggagatg gcgcaaacca cctgggttat cgaaaatgcc gaactggagc
     7441 agcagattca gggcggtaaa gagctgaaag acgcactggc tcagttaatc cccggccttg
     7501 atgtcagcag ccagagtcga accaactacg gtatgaacat gcgtggccgc ccgctggttg
     7561 tcctgattga cggtgtgcgc ctcaactctt cacgttccga cagccgacaa ctggactctg
     7621 tcgatccttt taatatcgac catattgaag tgatctccgg cgcgacggcc ctgtacggtg
     7681 gcgggagtac cggagggttg atcaacatcg tgaccaaaaa aggtcagccg gaaaccatga
     7741 tggagtttga ggctggcaca aaaagtggct ttaacagcag taaagatcac gatgagcgca
     7801 ttgccggtgc tgtctccggc ggaaatgacc atatctccgg acgtctttcc gtggcatatc
     7861 agaaatttgg cggctggttt gacggtaacg gcgatgccac cctgcttgat aacacccaga
     7921 ccggcctgca gcactccaat cggctggaca tcatgggaac cggtacgctg aacatcgatg
     7981 aatcccggca gcttcaactg ataacgcagt actataaaag tcagggagac gacaattacg
     8041 ggcttaatct cgggaaaggc ttttccgcca tcagcgggag cagcacacca tacgtcagta
     8101 aggggctgaa ttctgaccgc attcccggca ctgagcggca tttgatcagc ctgcagtact
     8161 ctgacagtga tttcctggga caggaactgg tcggtcaggt ttactaccgc gatgagtcgt
     8221 tgcggtacta cccgttcccg acggtaaatg cgaataaaca ggcgacggct ttctcctcgt
     8281 cacagcagga taccgaccag tacggcatga aactgactct gaacagccaa ctgatggacg
     8341 gctggcaaat cacctggggg ctggatgctg agcatgagcg ctttacctcc aatcagatgt
     8401 tcttcgatct ggctcaggca agtgcttccg gagggctgaa caaccataag atttacacca
     8461 ccgggcgcta tccgtcatat gacatcacca atctggcggc cttcctgcaa tccagctatg
     8521 acattaatga tatttttacc gttagcggtg gcgtacgcta tcagtatact gagaacaggg
     8581 tagatgattt catcgactac acgcagcaac agaagattgc tgccgggaag gcgatatctg
     8641 ccgacgccat tcctggtggt tcggtagatt acgataactt tctgttcaat gctggtctgc
     8701 tgatgcacat caccgaacgt cagcaggcat ggttcaattt ttcccagggg gtggcattgc
     8761 cggatccggg gaaatattat ggtcgcggca tctatggtgc agcagtgaac ggccatcttt
     8821 ccctgacaaa gagcgtgaac gtcagcgaca gtaagctgga aggcgtgaaa gtcgattctt
     8881 atgaactggg ctggcgcttt accggtgaca acctgcggac tcaaatcgcg gcatattact
     8941 cgctttccaa taagagcgtg gaaaggaata aagatctgac catcagtgtg aaggacgaca
     9001 ggcgccgtat ttacggcgtg gaaggtgcgg tggactacct gatcccggat actgactgga
     9061 gtaccggtgt gaacttcaat gtgctgaaaa ccgagtcgaa agtgaacggt caatggcaaa
     9121 aatatgacgt gaaggaatca agtccatcga aagcgacagc ttacattaac tgggcgccgg
     9181 aaccgtggag tctgcgtgta cagagcacca cttctttcga cgtaagcgat gcagagggta
     9241 acgatattaa tggttacact accgtcgatt ttatcagtag ttggcagctt ccggtgggaa
     9301 cactcagctt cagcgttgag aacctcttcg accgtgacta taccactgtc tggggacagc
     9361 gtgcacctct gtactacagc ccgggttacg gccctgcttc actgtacgac tacaaaggcc
     9421 ggggccgaac ctttggtctg aactactcag tgctgttctg acggggatgc ttttgcaaca
     9481 agggtatgct gtaaacaaca tggtccttgg tggccatgtt gtttacagcc agtattgttt
     9541 acagctagta taatatacag ccttaacaag atattccgtc tccggaatgg actgttcacc
     9601 actgaataac attatttctg ttttatggat ctttgactga aatttatcgc atatcctcat
     9661 ttcattgtcc gtctgaaaac taaccttact gaggtagcct gagtttaacg gacactcctt
     9721 cctgaaatag aatggcatca gaaggatgct aataatgagc agaaaaaccc aacgttactc
     9781 taaagagttc aaagccgaag ctgtca
//
LOCUS       DAJVTL010000146         9620 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.148, whole genome shotgun sequence.
ACCESSION   DAJVTL010000146 DAJVTL010000000
VERSION     DAJVTL010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9620
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.148"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(30..545)
                     /gene="ompX"
                     /locus_tag="OQQ26_003636"
     CDS             complement(30..545)
                     /gene="ompX"
                     /locus_tag="OQQ26_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HCS1858956.1"
                     /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
                     GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
                     YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
     gene            complement(598..663)
                     /locus_tag="OQQ26_003637"
     CDS             complement(598..663)
                     /locus_tag="OQQ26_003637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858957.1"
                     /translation="METFCYMKWPVRHHKSRRVSH"
     gene            898..1784
                     /gene="rhtA"
                     /locus_tag="OQQ26_003638"
                     /pseudo
     CDS             898..1784
                     /gene="rhtA"
                     /locus_tag="OQQ26_003638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308918.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
     gene            2083..2586
                     /gene="dps"
                     /locus_tag="OQQ26_003639"
                     /gene_synonym="pexB"
     CDS             2083..2586
                     /gene="dps"
                     /locus_tag="OQQ26_003639"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HCS1858958.1"
                     /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
                     FIESNIE"
     gene            2990..3736
                     /gene="glnH"
                     /locus_tag="OQQ26_003640"
     CDS             2990..3736
                     /gene="glnH"
                     /locus_tag="OQQ26_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HCS1858959.1"
                     /translation="MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
                     FSDGYYKSDLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL
                     RDKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            3875..4534
                     /gene="glnP"
                     /locus_tag="OQQ26_003641"
     CDS             3875..4534
                     /gene="glnP"
                     /locus_tag="OQQ26_003641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HCS1858960.1"
                     /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
                     AFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            4531..5253
                     /gene="glnQ"
                     /locus_tag="OQQ26_003642"
     CDS             4531..5253
                     /gene="glnQ"
                     /locus_tag="OQQ26_003642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000569103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HCS1858961.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     NPQVLIKNPPSQRLQEFLQHVS"
     gene            5370..7595
                     /gene="ybiO"
                     /locus_tag="OQQ26_003643"
     CDS             5370..7595
                     /gene="ybiO"
                     /locus_tag="OQQ26_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel protein"
                     /protein_id="HCS1858962.1"
                     /translation="MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ
                     KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV
                     SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALSHFSMLAVLVFGFYWLIRLCAL
                     PLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT
                     IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIG
                     YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA
                     FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG
                     MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD
                     FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT
                     LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV
                     FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI
                     GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTL
                     RVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPT
                     L"
     gene            complement(7592..8518)
                     /gene="rlmF"
                     /locus_tag="OQQ26_003644"
     CDS             complement(7592..8518)
                     /gene="rlmF"
                     /locus_tag="OQQ26_003644"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HCS1858963.1"
                     /translation="MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV
                     DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP
                     ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLR
                     RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG
                     QQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV
                     KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR"
     gene            8794..9054
                     /locus_tag="OQQ26_003645"
     CDS             8794..9054
                     /locus_tag="OQQ26_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415327.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HCS1858964.1"
                     /translation="MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATG
                     ASNLSDLEDKLAEKAREQGAKGYFINSAGGNDQMFGTATIYK"
     gene            9319..>9620
                     /locus_tag="OQQ26_003646"
     CDS             9319..>9620
                     /locus_tag="OQQ26_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HCS1858965.1"
                     /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL
                     VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGV"
BASE COUNT         2306 a         2426 c         2407 g         2481 t
ORIGIN      
        1 agaggcggat ttttatatca ccaaagtgat tagaagcggt aaccaacacc ggcaatccag
       61 gtgcctacgt caacgctacg aatacggctc tgctcgtaag agaagtccag agcaacgttt
      121 tccatcgggt tgaactgcag accagcaccg taggagaaac cgtagtcgct ggtgtcgtgt
      181 ttgtaggtcg ggtattcagt ggtctggaat ttaccataac ccacacccac tacaccgtag
      241 atgcttgccc agtcgttaat gcggtaagcc ggaccagcag tgatgccgta gtactggttt
      301 ttgttgtagt caccagagct tgcagtacgg cttttctcgg tgtaagtgaa agaaccgatc
      361 acacccagcg ggctgttgtc ttcttcatag cggtatttca ggttgaaacc gcccattttg
      421 ttcatttggc cctgagcgtc gctctgtgcg taaccgccag ttacggtaga agtcgcagct
      481 acggaagtac ctgcggtgaa agccagaact gcggccagtg ctgaaagaca tgcaattttt
      541 ttcataacca cctcaaatgt gattcaaata agtcctaagt tttaaatata tcaaaaatta
      601 atgggaaact cttcgcgatt tgtgatgtct aacgggccat ttcatgtaac agaacgtttc
      661 catacaccgc tatccatcta aatttaaatc actttttcag agaactgcgt aagtattacg
      721 catgttttcc ctgtcattca tccagattat tcctaatcac cagactaatg attccatcaa
      781 tcctggcgca ttttagtcaa aacgggggaa aattttttca acaaatgctc aaccagcatt
      841 gggtatatcc agtacactcc acgctttact taagtctaga tatttgtggg agaaaggatg
      901 cctggttcat tacgtaaaat gccggtctgg ttaccaatag tcatattgct cgttgccatg
      961 gcgtctattc agggtggagc ctcgttagct aagtcacttt ttccctggtg ggcgcaccgg
     1021 gtgtcactgc gctgcgtctg gcattaggaa cgctgatcct catcgcgttc tttaagccat
     1081 ggcgactgcg ctttgccaaa gagcaacgat taccgctgtt gttttacggc gtttcgctgg
     1141 gtgggatgaa ttatcttttt tatctttcta ttcagacagt accgctgggt attgcggtgg
     1201 cgctggagtt caccggacca ctggcggtgg cgctgttctc ttctcgtcgc ccggtagatt
     1261 tcgtctgggt tgtgctggcg gttcttggtc tgtggttcct gctacctctg gggcaagacg
     1321 tttcccatgt cgatttaacc ggctgtgcgc tggcactggg ggccggggct tgttgggcta
     1381 tttacatttt aagtgggcaa cgcgcaggag cggaacatgg ccctgcgacg gtggcaattg
     1441 gttcgttgat tgcagcgtta attttcgtgc caattggagc gcttcaggct ggtgaagcac
     1501 tctggcactg gtcggttatt ccattgggtc tggcggtcgc tattctctcg accgctctgc
     1561 cttattcgct ggaaatgatt gccctcaccc gtttgccaac acggacattt ggtacgctga
     1621 tgagcatgga accggcgctg gctgccgttt ccgggatgat tttcctcgga gaaacactga
     1681 cacccataca gttgctggcg ctcggcgcaa ttatcgccgc ttcaatgggt tctacgctga
     1741 cagtacgcaa agagagcaaa ataaaagaat tagacattaa ttaaatttac atttctgcat
     1801 ggttatgcat aaccatgcag aatttctcgc tacttttctt ctacaccgtc tttatatatc
     1861 gaattatgca aaagcatatt tattccgaaa attcctagcg agcaaataaa taagaattgt
     1921 tcttatcaat atatctaact cattgaatct ttattagttt tgtttttcac gcttgttacc
     1981 actattagtg tgataggaac agccagaata gcggaacaca tagccggtgc tatacttagt
     2041 ctcgttaatt actgggacat aacatcaaga ggatatgaaa ttatgagtac cgctaaatta
     2101 gttaaatcaa aagcgaccaa tctgctttat acccgcaacg atgtctctga cagcgagaaa
     2161 aaagcaacag tagagttgct gaatcgccag gttatccagt ttattgatct ttccttgatt
     2221 accaaacaag cgcactggaa catgcgcggc gctaacttca ttgccgtaca tgaaatgctg
     2281 gatggcttcc gcactgcact gatcgatcat ctggatacca tggcagaacg tgcagtgcag
     2341 ctaggcggtg tagctctggg gaccactcaa gttatcaaca gcaaaacccc gctgaaaagt
     2401 tacccgctgg acatccacaa cgttcaggat cacctgaaag aactggctga ccgttacgca
     2461 atcgtcgcta atgacgtacg caaagcgatt ggcgaagcga aagatgacga caccgcagat
     2521 atcctgaccg ccgcgtctcg cgacctggat aaattcctgt ggtttatcga gtctaacatc
     2581 gaataaatcc atcgctgatg gtgcagaact ttagtacccg ataaaagcgg cttcctgaca
     2641 ggaggccgtt ttgttttgca gcccacctca acgcacttat ttagtgcatc catctgctat
     2701 ctccaactga ttaagtaaat tttttgtatc cacatcatca cacaatcgtt acataaagat
     2761 tgttttttca tcaggtttta cgctaaataa tcactgtgtt gagtgcacaa ttttagcgca
     2821 ccagattggt gccccagaat ggtgcatctt cagggtattg ccctataaat cgtgcatcac
     2881 gtttttgccg catctcgaaa aatcaatgag ttgcaaaact ggcacgattt tttcatatat
     2941 gtgaatgtca cgcaggggat cgtcccgtgg atagaaaaaa ggaaatgcta tgaagtctgt
     3001 attaaaagtt tcactggctg cactgaccct ggcttttgcg gtttcttctc atgccgcgga
     3061 taaaaaatta gttgtcgcga cggataccgc cttcgttccg tttgaattta aacagggcga
     3121 taaatatgtg ggctttgacg ttgatctgtg ggctgccatc gctaaagagc tgaagctgga
     3181 ttacgaactg aagccgatgg atttcagtgg gatcattccg gcactgcaaa ccaaaaacgt
     3241 cgatttggcg ctggcgggca ttaccatcac cgacgagcgt aaaaaagcga tcgatttctc
     3301 tgacggctac tacaaaagcg acctgttagt gatggtgaaa gctaacaata acgatgtgaa
     3361 aagcgtgaaa gatctcgacg ggaaagtggt tgctgtgaag agcggtactg gctccgttga
     3421 ttacgcgaaa gcaaacatca aaactaaaga tctgcgtcag ttcccgaaca tcgataacgc
     3481 ctatatggaa ctgggcacca accgcgcaga cgccgttctg cacgatacgc caaacattct
     3541 gtacttcatc aaaaccgccg gtaacggtca gttcaaagcg gtaggtgact ctctggaagc
     3601 gcagcaatac ggtattgcgt tcccgaaagg tagcgacgag ctgcgtgaca aagtcaacgg
     3661 cgcgttgaaa accctgcgcg agaacggaac ttacaacgaa atctacaaaa aatggttcgg
     3721 tactgaaccg aaataataac gctacacctg taaagcgcac tggcagttcc ctctcccctc
     3781 tggggagagg attagggtga ggggcgcaaa cccgctccgg ggccattaat taccctgaat
     3841 ttgattattt acaccacggt aacaggaaca acatatgcag tttgactgga gtgccatctg
     3901 gcctgccatt ccgcttctga ttgaaggtgc caaaatgacc ctgtggattt cggtcctcgg
     3961 tctggctggc ggtctggtaa tcggattgct ggcaggtttt gcacgcgcct tcggtggttg
     4021 gatagccaac cacgtcgcgc tggtctttat tgaagtgatc cgcggcacac ctatcgtcgt
     4081 ccaggtgatg tttatttatt tcgccctgcc gatggcgttt aacgacttac gcatcgaccc
     4141 atttactgcg gcggtggtca ccatcatgat caactccggc gcgtacattg cggaaatcac
     4201 gcgtggtgcg gtgctgtcta tccacaaagg ttttcgtgaa gcaggactgg cgctcggtct
     4261 ttcacgttgg gaaaccattc gctacgtcat tttaccgctg gcactgcgtc gtatgctgcc
     4321 gccgctgggt aaccagtgga tcatcagcat taaagacacc tcgctgttta ttgttatcgg
     4381 cgtggcggaa ctgacccgtc aggggcaaga aattattgcc ggtaacttcc gcgcccttga
     4441 gatctggagc gccgtggcgg tgttctatct gattattacc ctggtgctga gctttattct
     4501 gcgtcgtctg gaaagaagga tgaaaatcct gtgattgaat ttaaaaacgt ctccaagcac
     4561 tttggcccaa cccaggtgct gcacaatatc gatttgaaca ttgcccaggg cgaagtcgtg
     4621 gtgattatcg ggccgtccgg ttccggtaaa tcgaccctgc tgcgctgcat caacaaactg
     4681 gaagaaatca cctccggcga tctgattgtc gatggcctga aggttaacga tccgaaagtt
     4741 gacgagcgcc tgattcgcca ggaagcaggt atggtgttcc agcagtttta cctcttcccg
     4801 catctgacgg cgctggaaaa cgtcatgttt ggtccgctac gcgtgcgtgg cgcgaacaaa
     4861 gaagaggcgg aaaaactggc gcgtgagctg ctggcgaaag tcggtctggc agaacgtgca
     4921 catcactacc cttccgaact ttctggtggt caacagcagc gtgtggcgat tgcccgcgcg
     4981 ctggcggtga agccgaaaat gatgctgttt gatgaaccga cttccgctct tgacccggaa
     5041 ctgcgccatg aagtgctgaa ggttatgcag gatctggctg aagaagggat gacgatggtg
     5101 atcgtgaccc acgaaatcgg ttttgccgag aaagtagctt cgcggctgat ctttatcgac
     5161 aaaggccgga ttgcggaaga tggcaatccg caggtgttga tcaagaaccc gccgagccag
     5221 cgcttgcagg aatttttgca gcacgtctct taacttctct gcctcccttt cacccgaaag
     5281 ggaggcacac cagattcctc tcatttaaaa tcgcccctcc cccagcatct atacttatct
     5341 ttttgctctg ttttctcact ggaggagtca tgcggtggat cctgttcatc ctcttctgcc
     5401 tgctgggcgc acctgcccac gcggtatcca tacccggcgt tacaaccaca acgacaacgg
     5461 actcaacgac tgaaccggcc ccggaaccgg atatcgaaca aaaaaaagcg gcctatggcg
     5521 cactggcgga tgtgctggat aacgacacct cgcgtaaaga attgatcgac cagttgcgta
     5581 ctgtcgccgc gacgccccct gcggaaccgg tcccgaagat cgtgccgccg acgctggttg
     5641 aagagcaaac cgtgctgcaa aaggtcaccg aagtcagccg ccattatggt gaagcccttt
     5701 ccgcccgctt cgggcaactt tatcgcaata tcaccggctc cccgcataag ccatttaatc
     5761 cacaaacctt cagcaatgcg ctgagccatt tttcaatgtt agcggtatta gtgtttggtt
     5821 tttactggct gattcgtctg tgcgcactgc cgctgtatcg caaaatgggc cagtgggcgc
     5881 ggcaaaaaaa tcgcgaacgc agcaactggc tgcagcttcc ggcgatgatt atcggggcgt
     5941 ttattatcga cctgctgtta ctggcactga cattatttgt cggccaggta ttaagcgaca
     6001 acctgaatgc gggcagtcgc accatcgctt tccaacaaag tttatttctc aacgcctttg
     6061 ccctgattga atttttcaaa gctgtactac gcctgatttt ttgcccaaac gtggcggagc
     6121 tgcgcccgtt cacgattcag gacgagagcg cccgttactg gagtcgtcgc ctgagctggt
     6181 taagcagttt gataggttat ggcctgattg tggccgtgcc gattatctct aatcaggtga
     6241 atgtacagat aggtgcgctg gcgaacgtca tcattatgct gtgcatgacc gtctgggcgt
     6301 tgtacctgat cttccgaaat aaaaaagaga ttacccagca tttgctcaac tttgcggagc
     6361 attcgctggc ttttttcagc ctgtttatcc gcgcctttgc gctggtgtgg cactggctgg
     6421 caagcgccta ttttatcgtg ctgtttttct tttcgttgtt cgatccgggc aacagtctga
     6481 aatttatgat gggtgcaacg gtgcgcagcc tggcgattat tggtatcgca gcgtttgttt
     6541 ccggtatgtt ttcccgctgg ctggcgaaaa ccatcaccct ctcgccacat actcagcgta
     6601 actatccgga gctacaaaaa cggctgaatg gctggctttc ggcggcgctg aaaacggcgc
     6661 gtattctgac cgtctgcgtg gcagtaatgt tgctgttgag cgcatgggga ttgttcgatt
     6721 tctggaactg gctgcaaaac ggcgcggggc agaaaaccgt agatatcctg atccgcatcg
     6781 cactcattct tttcttctcg gcggttggct ggacggtgct cgccagtttg atcgaaaacc
     6841 ggctggcttc ggatattcat ggccgcccgc tacccagcgc ccgtacgcgt accctgctga
     6901 cgctgttccg taacgcgctg gcggtgatta taagtaccat caccatcatg attgtgttgt
     6961 cggaaatcgg cgtcaatatc gcgccattgc tggcaggtgc cggggcatta ggtctggcta
     7021 tctcgtttgg ttcgcaaacg ctggtgaaag atattatcac cggggtattt attcagtttg
     7081 aaaacggcat gaacactgga gatttggtga ctatcgggcc gttgaccggc acagtggaac
     7141 ggatgtcgat tcgctccgtg ggcgtgcgtc aggataccgg ggcgtatcac atcattccgt
     7201 ggtcttcgat aaccaccttt gctaacttcg tccgcggtat tggttcggta gtggcaaact
     7261 acgatgttga tcgccatgaa gatgctgata aagccaatca ggcactgaaa gatgcggtag
     7321 cggaattgat ggaaaacgaa gaaattcgcg ggctgattat tggtgaaccg aactttgccg
     7381 ggattgtcgg cttaagcaat accgcgttta cactgcgtgt ttcgttcacc acgctgccac
     7441 tcaaacagtg gacggtacgc tttgccctcg acagccaggt gaaaaaacat ttcgacctgg
     7501 cgggcgttcg cgcgccagtg cagacttatc aggtgctgcc tgctccgggc gcgaccccgg
     7561 ctgaaccgct gccgccgggg gagccaacgc tttaacgttg gcgattaaca aaacggcggc
     7621 gctgctcgtc gttcataaag gtccaggcaa taaagcgact ctgcttttgc ccctgggcca
     7681 tctctttttt aaccaccttc accgcgccca cgtccgtcag agcacgatac aacggcggta
     7741 agttttcacc acgagatacc agcgaggtaa accacatcac ctgcttcgcg aagcctttgc
     7801 tctcttcaat catctttttg ataaaggcga cttcaccgcc ttcacaccac aactcctgtt
     7861 gctggccgcc aaagttcagt gcatcgtctt tgttcagccc caggttacgg cgtttacgct
     7921 cactacctgc ccgcgccgca gcggcggaat cgtggaatgg cgggttacac aaggtcgcgt
     7981 cgtattgctc gtttttatgg atgatgccgt taaaaatcgc cccactctct ttttgccgac
     8041 gcagacgaat ggcgcgatta agccccggat tagcactgat gatcgcctgc gcgctgctta
     8101 acgcctggct gctggtttca ctaccggtaa aacgccagcc atattcatgt acgccaatca
     8161 gcggataaat acagttcgca ccaacgccga tatccagaat gctggcattc gctggaattg
     8221 ttccgcttgc ttctgccagt aaatcggcaa ggtggtgaat ataatccgcc cggcccggta
     8281 ctggcgggca gagaaaaccg tcggggatat cccagttcgc tacggcgtaa aaatgggcca
     8341 gcaacgcttt attgagcgcc ttcaccgcca gcggattggc aaagtctacg ctttgctccc
     8401 ctgcgggtgt aagcgtgagg aattgcctga gttcaggatt gacctgacaa agcgtggcga
     8461 gatcgtagcg gctgtgatga cggttgcgcg gatgcaaccc cggtttctgg gcggacatag
     8521 cattctcctt taagcagcgg cgtaagatac ccgcataacg cgacagggta aatatctggc
     8581 tgcgtttatc attccccaaa accttaacat ggctatggtt tatggcaatt catcataaaa
     8641 atcagcatta tgcatgtcat tgatttgtct tattttgtaa aaatgtatcg ttcaaaaaat
     8701 aagcacatct ctgtcaattt tttgcgtcat ttgcatcgcg caggcgacct acacttatca
     8761 ggcactaccc gttgtattta tgaggatgtc attatgaaaa agtgcctcac actactgatt
     8821 gccaccgtcc tgagcggaat ctctctcacg gcttatgccg cgcaaccgat gagtaacctg
     8881 gacagcggtc agctacggcc cgccggtacc gtttcggcaa ctggcgcatc aaacctaagc
     8941 gatctggagg ataaactggc agaaaaagcg cgcgaacaag gcgcgaaagg ttatttcatt
     9001 aattccgcag gcggaaatga ccagatgttc ggtactgcaa ccatctacaa ataaccccac
     9061 caacgtaact gcattcgcct ctggatgcag ttttcgcctg ttttgtaatc aaaaaacatc
     9121 aaatatgtac gcaatgtaaa taaatgtatt tctttttcgc gcaatgggtg atagaaaatc
     9181 gcactaagtg ataatgctta tcaaaattat tatcacttgc acgaacgcta tcacgagatt
     9241 aacagtggca tcgcatccgc agagaggctt tctcgtggca gtgaaaattt caacatataa
     9301 gaaaaagtca cctgcaaaat ggaaaacaat cgcaatttcc ctgccagaca atttcattcg
     9361 ctcacgttct ttgccggtct ttgtattggc atcacgcctg tggctcaggc actcgccgcc
     9421 gaagggcaaa ctaacgcgga tgacacgctg gttgtcgaag catcaacgcc ttcgctttat
     9481 gcgccacaac aatctgccga tccgaaattc tcgcgtccgg tagcggatac tacccgcacg
     9541 atgacggtga tttctgaaca agtgattaaa gatcagggcg caaccaacct taccgacgcg
     9601 ctcaaaaacg tccccggcgt
//
LOCUS       DAJVTL010000147         9471 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.149, whole genome shotgun sequence.
ACCESSION   DAJVTL010000147 DAJVTL010000000
VERSION     DAJVTL010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9471
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.149"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            261..305
                     /locus_tag="OQQ26_003647"
     CDS             261..305
                     /locus_tag="OQQ26_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002515600.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858966.1"
                     /translation="MAEPNLIVREAEKG"
     gene            305..742
                     /locus_tag="OQQ26_003648"
     CDS             305..742
                     /locus_tag="OQQ26_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016807456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HCS1858967.1"
                     /translation="MGYITQEDLLRADGNLVWNMAINRETNGLDEDKIRQAISDAEAE
                     IDSFLSRRYQLPLGVTEIPRPLQRVAVSLAFYWLSERDNQITELIQKRYDDAIKTLRE
                     MANGTRDLGLPTYATPAETDNGKIIVVGANARLFTRNNLKGVL"
     gene            742..1284
                     /locus_tag="OQQ26_003649"
     CDS             742..1284
                     /locus_tag="OQQ26_003649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004114586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCS1858968.1"
                     /translation="MGISVQVSGDQRLEDIRRAVEKLAEGSLQSELLESIGAVVESQT
                     RRRIIDEKTSPGGERWPDWSDGYKKTRHGNQSLLRGEGHLLESIQYIVENRVVRIGSP
                     LDYARIMNDGFSGSVPVSAHKRLISQCFGRALKYPVWQTVGAHHRMMNIPQREFLGLS
                     SASQQELQQVISHFWKEVLP"
     gene            1281..1892
                     /locus_tag="OQQ26_003650"
     CDS             1281..1892
                     /locus_tag="OQQ26_003650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858969.1"
                     /translation="MTEQRPELRTPGSTVAAAEHIVAWLQTALQGDTPDRADVVERHI
                     GQFNSPDEVKRYLSGRTGCIRVAALRVRDINPRGGLSGLVTWVAYIMATDSWGYSRDV
                     RCEVLAGKVIKRLLSSDATAGMGAERMAADVRADNIYSVSLDGLGVTMWAVTWEQEFR
                     LDEEIDLAALPDFLRLGATLRSGEHTEINDVIHVRGDDGTETD"
     gene            1873..2058
                     /locus_tag="OQQ26_003651"
     CDS             1873..2058
                     /locus_tag="OQQ26_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HCS1858970.1"
                     /translation="MEQKLIKPARENVRVRKPDGAHLSPEGERLNVCAYWLRREAEGD
                     VEITTLPKNNNKTRGKK"
     gene            2058..3533
                     /locus_tag="OQQ26_003652"
     CDS             2058..3533
                     /locus_tag="OQQ26_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000052046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HCS1858971.1"
                     /translation="MSLGSIPDDIRVPLVWIDIDNSQALEGASAQSRKILVMGHAVSS
                     GSADALSLTRITSDSQADQLYGKGSMLAEMLKMLRRANTYTETWAMPVAAPEGAAAKA
                     TLTVLGTATEAGTVALLINGVSVQVSVSAGDTKENIAKAIADAVTKKPATQVAAAVKD
                     DATDTVELTVNWHGVTGNGADVRLNYHTGEAFPAGVKVTATAFTGGTGTPEMADAVAA
                     IGPEWFTDIIAPFTDTKSLNTLRDELLNRWGPLKMMEAQLWTAFCGTHGETGTFGETR
                     NDWLISCIGTNLSPHPAWMWAASYGATAAYHLAIDPARPLQTLVLTGILPPARNVRWD
                     MPERNLLLHDGIATHMVDAGDNVCIEREITMYRVNQYGDADVSYLDVQSPATLGRIRY
                     IIKNRFSNRYPRHKLADDDVLDSLDAGQPVMTPKLCTAELLDICQTELLPAGLVENFS
                     DYRDTLQVTRDSSDKNRLNFICHPNLVNQLRVLAGLIQFKL"
     gene            3543..3899
                     /locus_tag="OQQ26_003653"
     CDS             3543..3899
                     /locus_tag="OQQ26_003653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001062747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tube protein"
                     /protein_id="HCS1858972.1"
                     /translation="MAKILGMATIRVNGREIKTEGKSTLNPGGFSRTQHMGGGKVWGI
                     SSKMASPSIKVTIAAAADMDVIEISNWEDVTVMFYGDNGLNYMMTGSATDNPAELDED
                     SGTISANFIGEKCVKV"
     gene            3901..4296
                     /locus_tag="OQQ26_003654"
     CDS             3901..4296
                     /locus_tag="OQQ26_003654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HCS1858973.1"
                     /translation="MAAMEFELKHGLLTGKGTADETLHKTVKLRELTASDVIDAQLAA
                     ERVVMGGNGKAVAYCSEVLMGLEMMRRQVASIGNIPGPLDMKQLRMLHPADLELISTK
                     AAVLDDMLEEVATRGRTDAAGVGTDEPAG"
     gene            4383..6227
                     /locus_tag="OQQ26_003655"
     CDS             4383..6227
                     /locus_tag="OQQ26_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000190545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1858974.1"
                     /translation="MATGNRLSTEIMINLAGNLTAKARQYGANMSQFARNNQKAMRLV
                     KATTEAAGRSLDALGNRYTAMIAGFGGGMTLKGLTDFDAQIRRAGTNAKLTDEQVSRL
                     RKNIRETARMSDIRLSAQVLLEGQDALYGLTGKPEFVEKNIRNQGLATQAFGTAPQDA
                     AALMAQMSEKQIEAPQEVEGMFDRFYHQFSIGSVGVDQLARVSAKLFSIYTGGGKEAI
                     AQLGALEQMLAKTTGSADEAVTALNSIWSEVTRKDNIKFLKRNGVDVLDPVTGKPRLP
                     YDVIRDVVRRAKFNEQNLQDVFGDTSMRGLRALLSEDALQLTEKMIYAPVESGAMRKA
                     AEKNARSFQSAMQSLKNEYEVFAEKNLAKPVQDLADAINSVDQNWLQVGKYMAIALGG
                     IIAVRKTYKLGKTIHDIMNPKGKGKGIPGGITDVFGSGVMPVYVVNMGSGGMNGNVGG
                     LPDAPDSSRNPRNPRNPRGPGNRGGNAGKGAGIIAGALEFYDFLTTQYALPGEIDSLT
                     KSVAGDASASPWEREFAQQSQDNQKALESVWRKVTDWFNSLGDKNIADPRPWAGMQPT
                     QNYPFLPQQLQGEIRVVVEGDARVKSVRVDQPGVRLSAQAGVTSVEQG"
     gene            6227..7501
                     /locus_tag="OQQ26_003656"
     CDS             6227..7501
                     /locus_tag="OQQ26_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization N-terminal domain-containing
                     protein"
                     /protein_id="HCS1858975.1"
                     /translation="MTTSNGKWDGLRDASFRGVPFFLVDTEGTGGRRAIPRAYPRRET
                     AWTDDNGAVPGQQQINAKLPGKNFRDDLNALLDALNTPGPGELVHPWFGIQTVQVGKV
                     THRLCTEEDGIAYVTFEVFEAGERLFPSAADNTQQEVLTGIDAVKAAIDDGDWFGALD
                     GLGDMADSFLADMENLVANLPTLPAALNQWMDRLKHFKAMAGTLIATPGRLVSELSAR
                     VEDIAGLVTEPPEALAVYTTLRNQWAGERARQIATGALPEDITVKPGSVADGNPGFAI
                     GLSPDYQPVSDSLQKNIDDFRQVVVLGALLGQASAVASMTFDTRDAALSAGDTLAAEL
                     HEQAVAAVENNQRTLWRTLRDLRQAVITDARERAARLPETRQVTLTTTTSAALLAWRE
                     HGDTRRRDEIVQRNRLRHPSFILPTQPVEITD"
     gene            7501..8570
                     /locus_tag="OQQ26_003657"
                     /pseudo
     CDS             7501..8570
                     /locus_tag="OQQ26_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000446555.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            8561..9097
                     /locus_tag="OQQ26_003658"
     CDS             8561..9097
                     /locus_tag="OQQ26_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000523893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein"
                     /protein_id="HCS1858976.1"
                     /translation="MGLNAIARRLRLMVDRAVVRLVSDGLARQNLQIQTLADATDDDV
                     ERFQNYGFTSVPPEGSEAIVMAVGGRRDGLVAIAVEDKRCRPKGLSPGDVRVYHRDGK
                     SHITLKENGVIEITGEQLDFSGKTVNLTADELLNIIGKQMKFVGPCEFTEDVRIKGKS
                     FSEHIHKDGDNENTSPPV"
     gene            9094..>9471
                     /locus_tag="OQQ26_003659"
     CDS             9094..>9471
                     /locus_tag="OQQ26_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000206927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HCS1858977.1"
                     /translation="MTTEIRWNNMLSRGDITVTHNGLSRDEGLVTQVLICLFTDARAD
                     DDDVIPDGSGDPRGWPGDTYSDFSWGSRLWLLEREKLTEDVRLRVEDYARLSMQPLLR
                     AGYARNATVTASIIIPDRIAFLVV"
BASE COUNT         2163 a         2562 c         2934 g         1812 t
ORIGIN      
        1 aaaaagcaga aaccaaaggc gcgaaagccg caaagaacag cgctgcacag gaaaacccgg
       61 caccgctggc agacgttatt gtggctgacg gtcaggcgaa tgaaccacgt ccggctgaag
      121 acccggttgc tgtacagggt gacgcccctg tccggctgaa cgtcagggcc gtgtctgaaa
      181 acgggttctg gcgctgtggc cgtttctggt cacatatcgg tgaggatgtg gcggtgagcg
      241 ctgcggttgc cacccgcctg atggcagaac cgaatctgat tgtccgggaa gcggagaaag
      301 gctgatggga tacatcacgc aggaagacct gttacgcgcg gacggcaatc ttgtctggaa
      361 catggcgatt aaccgggaaa ccaacgggct ggatgaagac aaaatccgtc aggccatcag
      421 tgatgcggaa gcggaaattg attcgtttct gtcccgccgc taccagctgc cgctgggggt
      481 gacggaaatc ccgcgcccgc tgcaacgcgt ggcggtatcg ctggcgtttt actggttatc
      541 agagcgtgac aatcaaatca cggagctgat ccagaaacgc tacgacgacg ccattaaaac
      601 cctgcgtgaa atggcgaacg gcacccgtga cctgggcctg ccgacgtatg ccaccccggc
      661 agaaaccgac aacgggaaaa ttattgtggt gggtgccaat gcccggctgt tcacccgtaa
      721 caacctgaaa ggggtgctgt gatggggatt tctgtacagg tcagcggtga ccagcgtctg
      781 gaggatatcc gccgcgccgt tgaaaagctg gcagagggtt cattgcagtc agagctgctg
      841 gaaagtatcg gtgcggtggt ggaatcacag acccgccgcc gcatcatcga tgagaaaacc
      901 agtccgggtg gcgaacgctg gccggactgg tctgacgggt acaaaaagac ccgccacggc
      961 aaccagagtc tgctgcgcgg tgaaggccat ctgctggaga gtatccagta catcgtggaa
     1021 aaccgcgtgg tgcgtatcgg ttcaccgctg gattatgccc gcatcatgaa tgacggcttt
     1081 tccggcagcg tgccggtcag cgcccacaaa cggcttatct cgcagtgttt cgggcgggcg
     1141 ctgaaatatc cggtctggca gaccgtcggc gcacatcacc gcatgatgaa cattccgcaa
     1201 cgtgaatttc tggggctgtc ttctgccagc cagcaggagc tgcaacaggt tatcagtcat
     1261 ttctggaagg aggttctgcc atgacagaac aacgccctga actgcgcaca ccggggagca
     1321 ccgttgcggc cgcagagcac attgtggcct ggctgcagac ggcccttcag ggggacaccc
     1381 ctgaccgggc tgacgtggtg gagcgtcaca tcggccagtt caacagcccg gatgaagtga
     1441 aacgctatct gtccggtcgc actggctgta tccgtgtcgc ggccctgcgt gtccgggata
     1501 tcaacccgcg cggcgggctg tccggtctgg tcacctgggt ggcttacatc atggcgacgg
     1561 attcgtgggg gtattcccgc gacgtgcgct gtgaagtgct ggccggaaag gtgatcaaac
     1621 gcctgctgtc gtcggatgcc acagcgggca tgggggctga acgcatggct gctgatgtgc
     1681 gggcagacaa catttactcc gtcagcctcg acgggctggg tgtcaccatg tgggcggtga
     1741 cgtgggagca ggaattccgg ctggatgaag agattgatct cgccgcgctc ccggatttcc
     1801 tgcgcctcgg ggcgacactg cgcagcggcg aacacactga aattaacgac gtgatccatg
     1861 tacggggtga cgatggaaca gaaactgatt aagccagcgc gggaaaacgt ccgtgtccgt
     1921 aaaccggatg gcgcacattt atccccggaa ggggaacgtc tcaacgtctg cgcttactgg
     1981 ctgcgccgtg aagccgaggg agatgtggaa ataaccacac ttccgaaaaa taacaacaaa
     2041 accagaggga aaaaataatg tcgctgggtt ccattcctga tgatatccgc gtcccgcttg
     2101 tctggatcga tatcgacaat tcacaggcgc tggagggtgc atccgcgcaa agccgaaaaa
     2161 ttctggtcat gggccatgcg gtatcgtccg gcagcgcaga cgccctgtca ctgacccgta
     2221 tcaccagtga cagccaggca gaccagcttt atggcaaagg gtcgatgctg gctgaaatgc
     2281 tcaaaatgct gcgtcgtgcc aacacgtaca cggaaacctg ggcgatgccg gttgccgctc
     2341 ctgaaggcgc tgccgcaaaa gccacgctga ccgtgctggg tacagcgacc gaagccggaa
     2401 cggtggcact gctgattaac ggtgtgtccg ttcaggtgag cgtgagcgcc ggggatacga
     2461 aggaaaacat tgcaaaagcc attgctgatg cggtgacgaa aaagcctgcc acgcaggtgg
     2521 ccgctgcggt gaaggatgat gccacggata ccgtggagct gaccgtgaac tggcacggcg
     2581 tcaccggcaa cggtgccgac gttcgcctga actaccacac cggtgaagcc ttcccggcag
     2641 gtgtgaaggt gaccgcaacc gcgtttaccg gcggcaccgg gacaccggaa atggcagacg
     2701 ccgttgcggc catcggcccg gagtggttta ccgatatcat cgccccgttc accgacacga
     2761 aaagcctgaa caccctgcgt gatgaactgc tgaaccgctg ggggccgctc aaaatgatgg
     2821 aagcgcagct gtggacggcg ttttgtggca cgcacgggga aaccggcacg tttggtgaaa
     2881 cccgcaatga ctggctgatt agctgcatcg gcaccaacct gtcgccgcat ccggcgtgga
     2941 tgtgggccgc gtcatacggc gcaacggcag cgtatcacct tgccattgac ccggcgcgtc
     3001 cgcttcagac gctggtcctg accggcattc tgccgcctgc gcgtaatgtt cgctgggata
     3061 tgccggaacg taacctgctg ctgcatgacg gcattgccac gcacatggtg gacgccgggg
     3121 ataacgtctg catcgagcgt gaaatcacca tgtaccgggt taaccagtac ggtgatgcgg
     3181 atgtgtcgta tcttgatgtg cagtcacccg ccacgctggg ccgtatccgt tacatcatta
     3241 aaaaccgttt ctcgaaccgt tatccgcgcc acaagctggc ggatgatgac gtgctggact
     3301 cgctggatgc ggggcagccg gtgatgacgc cgaagctgtg cactgcagag ctgctggata
     3361 tctgccagac cgaacttctc ccggcgggcc ttgtggaaaa cttcagcgat tacagggaca
     3421 cgcttcaggt gacacgcgac agcagcgata aaaaccgcct gaactttatc tgccacccga
     3481 atctggtgaa ccagttgcgt gtgctggcag gcctgattca gttcaagctt taagggggcc
     3541 acatggcaaa aattcttggc atggcgacca ttcgcgtgaa tggccgcgaa attaaaaccg
     3601 aggggaaatc cacgctgaat ccgggcggct tcagccgcac ccagcatatg ggcggcggca
     3661 aggtctgggg tatctccagc aagatggcct cgccgtccat caaggtaacc attgcggcgg
     3721 cagcggatat ggacgtgatt gaaatcagca actgggaaga tgtcacggtg atgttctacg
     3781 gcgacaacgg cctgaactac atgatgacgg gttccgccac ggataacccg gcagagctgg
     3841 acgaggattc cggcaccatc agtgccaact ttatcggtga aaaatgcgtg aaggtgtgac
     3901 atggccgcaa tggaatttga actgaaacac gggcttctga ccggcaaagg cacggcagat
     3961 gaaaccctgc ataaaaccgt gaaactgcgc gaactgaccg ccagtgatgt gattgatgcg
     4021 caactggccg cagaacgcgt cgtcatgggc gggaacggaa aggcggtggc ctactgttct
     4081 gaggtgctga tgggactgga gatgatgcgc cgtcaggttg cgtcaatcgg taatatcccc
     4141 ggcccgctgg acatgaaaca gttgcgaatg ctccacccgg cagaccttga gcttatcagc
     4201 acgaaagcgg ctgtgctgga tgacatgctt gaggaggtgg caacgcgggg gcgaactgat
     4261 gccgctggcg tcggcactga tgaacctgct ggttaacctg tcttcgcgat tcagcattca
     4321 gtacctggaa cagctgcccc tgcagcagtt gttccgcctg ataaagcaac tggagaaaca
     4381 gcatggcaac aggtaaccgt ctcagcacgg aaatcatgat caaccttgcc gggaacctga
     4441 ccgccaaagc ccggcagtac ggtgcaaaca tgtcgcagtt cgcccggaac aaccagaagg
     4501 ccatgcgcct ggtcaaagcc acaacggagg ctgccgggcg cagtctggat gcgcttggca
     4561 accgctacac ggcgatgatt gccgggttcg gtggtggtat gacccttaaa ggcctgacag
     4621 attttgatgc gcaaatccgc cgtgcgggta caaatgcaaa actgaccgat gagcaggtat
     4681 cccgtttaag aaaaaacatc cgggaaaccg ccagaatgtc agacattcgc ctcagtgccc
     4741 aggtcttact ggaaggccag gatgcactgt atggcctgac cggtaagccg gaatttgttg
     4801 aaaaaaacat ccgcaatcag gggctggcca cgcaggcatt cgggactgcg ccacaggatg
     4861 ccgcggcact gatggcacag atgtccgaaa aacagattga agcgcctcag gaggttgaag
     4921 gcatgttcga ccgcttctac caccagtttt ccattggttc ggttggtgtg gatcaactgg
     4981 cgcgtgtatc agcaaaactg ttttcgattt ataccggtgg tggcaaagag gcgatagccc
     5041 agttgggggc acttgaacag atgctggcaa aaacaaccgg ctctgcggat gaagcggtga
     5101 ccgcgctgaa cagtatctgg agtgaagtca cccgaaaaga caatatcaag tttctgaaaa
     5161 gaaacggggt tgatgtgctt gatcctgtca caggaaaacc ccgtctgcct tatgacgtaa
     5221 tcagagacgt tgtcaggcgg gcaaaattta atgagcagaa cttgcaggat gttttcgggg
     5281 atacttccat gcgtggatta agggcactgc tcagtgaaga cgcccttcag ctaacagaaa
     5341 aaatgattta cgccccggtt gaatccggtg ccatgagaaa agctgcggag aaaaacgccc
     5401 ggagttttca gtctgcgatg cagtccctga agaatgaata tgaggttttt gctgaaaaaa
     5461 atctggcaaa acccgttcag gacctggcgg atgccatcaa cagcgtggac cagaactggt
     5521 tgcaggtcgg taaatatatg gcaattgcgc tgggtggcat tatcgccgta cgtaagacgt
     5581 acaagctcgg taaaaccatc cacgacatca tgaatcccaa agggaaaggc aaagggatac
     5641 ccggcggtat tacggatgtt ttcggctccg gcgtgatgcc ggtgtatgtg gtcaatatgg
     5701 gcagtggcgg gatgaacggc aatgtcggtg gtctgccgga tgcgccggat tcatcacgca
     5761 atccccgtaa cccacgcaat ccacgaggtc cgggtaaccg cggaggtaat gcgggcaaag
     5821 gcgctggcat catcgccggt gccctggaat tttacgattt tctgaccacg caatacgccc
     5881 tgccgggtga gattgacagt cttacaaaat ccgtggccgg tgatgccagc gccagcccgt
     5941 gggagcgcga gttcgcgcaa caaagccagg ataaccagaa agcgctcgag tccgtctggc
     6001 gtaaggtaac ggactggttt aattcgctgg gtgacaagaa cattgccgac ccgcgaccgt
     6061 gggcaggtat gcaacccaca cagaattatc ctttccttcc gcaacaattg cagggggaaa
     6121 tccgtgtggt ggtggaaggt gatgcccgcg tgaaaagcgt cagagtggat caacccggcg
     6181 tcagactcag tgcgcaggct ggcgtcacca gcgtggagca gggttaatga caacgagcaa
     6241 cggtaaatgg gacgggctgc gcgacgcctc gtttcgtggc gtccccttct ttctggtgga
     6301 tacggagggc accggtggtc gtcgtgccat tccccgtgct tatccccggc gtgaaaccgc
     6361 ctggacggat gataacgggg ccgttccggg gcaacagcag attaacgcaa agctgccagg
     6421 taaaaacttc cgggatgatt taaacgccct tttagatgcg ctcaataccc ccggccccgg
     6481 cgagcttgtc cacccgtggt tcgggataca gaccgtacag gttggcaagg tcacccatcg
     6541 cctctgcacg gaggaagacg gcattgcgta tgtcaccttt gaagtgtttg aggcaggcga
     6601 gcgcctgttc ccgtctgcgg cggataacac gcagcaggaa gtgctgacag gcattgatgc
     6661 ggtgaaagcc gccattgacg atggcgactg gttcggcgca ctcgacgggc tgggtgacat
     6721 ggccgacagt tttctggccg atatggaaaa ccttgtggct aacctgccca cgttaccggc
     6781 agcactgaat cagtggatgg acaggctgaa gcattttaag gcgatggccg gaaccctcat
     6841 tgccacaccg gggcgtctgg tcagtgagct gtcagcacgg gtggaagata ttgcgggcct
     6901 tgtgacggaa ccacccgaag cactggcggt ttacacgaca ttacgcaacc agtgggccgg
     6961 agaacgtgcc aggcagattg ccaccggcgc actgccggaa gatatcaccg tgaagcccgg
     7021 cagcgtggca gacggcaacc ccggctttgc catcgggctg tcaccggatt atcagccggt
     7081 atctgacagc ctgcaaaaga acattgacga cttccgccaa gtggttgtgc tgggagccct
     7141 gctgggacag gccagtgccg tggcctcgat gacgttcgat acccgtgatg cggcgttatc
     7201 tgccggtgac acgctggcgg ctgaactgca tgagcaggcg gtggcggcgg tggaaaacaa
     7261 ccagcggaca ttgtggcgaa cgctgcgcga tttacggcag gccgtgatta cggatgcccg
     7321 cgagcgtgcc gcccgtctgc cggaaacccg gcaggtgacg ctgaccacaa ccacctctgc
     7381 cgcattgctg gcatggcgcg agcatggtga cacacgccga cgggatgaaa tcgtgcagcg
     7441 taaccgcctg cgtcatccgt cattcatcct accgacgcaa cctgtggaga tcaccgactg
     7501 atggaatccg tgattcttac cgttgacggc aaactgtggg aaggctggac ggaaatgtcc
     7561 gtcagccgtt ccctgaaggc gattgccggt gagtttgaac tcagtgtgac aacccgctgg
     7621 tcagcggcgg caccgcgcgt gattcgtgag gggcaaccct gcacggtcag gctgggcgca
     7681 gataccgtgc tgacggggta tatcgatgat tttattcccg gctatgaggc tgaaaacgtg
     7741 gagattcgcg tcatggggcg cgataaaacc ggcgacctgg tggactgctc tgtggtgcat
     7801 tcgtccggga aatggaaagg cgtgcggctt gaacaggtgg cggctgatgt ctgccgcccg
     7861 ttcgggataa ccgtcatcac ggaaaccccg accggggagg catttgcgtc tgtcgttctg
     7921 gaacagggtg aaacgggctt tgaactgctc gaccggctgg caaaacagcg cggcgttctg
     7981 ctgacgtctg acggcgcggg taacctgatt atcacccgcg cctcttccgt tcgcgcgggc
     8041 gtgtcactgg tgctgggaaa aatatcctcg ccgcccgtgg gcgcttcagc tggcgggagc
     8101 gtaacagcca gtacatcatc aagggcacca ccagtgcccg tggcaaactg tgggacagcc
     8161 agcctgcccc gatggtgggc ggtcgccagt acatcaccga agccccggaa attaaccgtt
     8221 accgcccgcg cattctggtc aatgaagaca gcctgaccgt gggcggggcc agcattcgcg
     8281 gggaatggta caaagcccgg atgctgggag agtcccgcac gacggaaatc acggtggcag
     8341 gctggcgcga acagggcgac agcggcccgc tgtggcagac caaccgcctt gtcgatatcg
     8401 acgacagcat tcagaacctg aaaaccacct ggctgatatc cggggtgaca tggacggatg
     8461 gcgcacaggg gaggatgacg gttctggcgc tggttccgcc tgaatcactg gacatgccgg
     8521 aaatgaaagc gaagacgaaa aaaacaaagg cggtggccac atgggattaa acgcaattgc
     8581 ccgccgcctg cgactgatgg ttgaccgcgc tgttgtccgc ctggtgtctg acggtctggc
     8641 acggcagaac ctgcaaattc agacgctggc agatgccacc gatgacgacg tggaacgctt
     8701 ccagaactac gggtttacgt ccgttccgcc ggaaggttct gaagccattg tgatggccgt
     8761 tggcggacgg cgtgacgggc tggttgccat cgcggtggaa gacaagcgat gtcgcccgaa
     8821 aggactgtcc cccggcgatg tcagggtgta tcaccgggac ggcaaatcac acatcaccct
     8881 gaaggaaaac ggcgtcattg aaatcacagg agaacaatta gacttttcag ggaaaacggt
     8941 aaatctcact gccgacgaac tgctgaatat tatcggtaaa caaatgaaat tcgtcggtcc
     9001 ctgtgaattc actgaagatg tcagaatcaa gggtaaatca ttcagcgaac acattcataa
     9061 ggacggcgac aatgagaata catcaccgcc cgtatgacga cagaaatccg ctggaataac
     9121 atgctctcac ggggtgacat caccgtcacc cataacggcc tctcacggga tgaggggctg
     9181 gtcactcagg ttcttatctg ccttttcacc gatgcccgcg ctgatgacga tgatgtcatt
     9241 cctgacggct ccggcgaccc gcgcggctgg ccgggcgaca cgtacagcga tttttcgtgg
     9301 ggttcccgcc tgtggctgct tgagcgtgaa aagctgacgg aagatgtccg cctgcgcgtg
     9361 gaagattacg cgcggctgtc catgcagccg cttctgcgtg ccggttacgc ccgtaacgcc
     9421 accgtcacgg ccagcatcat cattcctgac cgtattgcct ttctggtggt g
//
LOCUS       DAJVTL010000148         9463 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.150, whole genome shotgun sequence.
ACCESSION   DAJVTL010000148 DAJVTL010000000
VERSION     DAJVTL010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9463
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.150"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..257)
                     /gene="wcaB"
                     /locus_tag="OQQ26_003660"
     CDS             complement(<1..257)
                     /gene="wcaB"
                     /locus_tag="OQQ26_003660"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
                     /protein_id="HCS1858978.1"
                     /translation="MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPL
                     LVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVA"
     gene            complement(260..1099)
                     /gene="wcaA"
                     /locus_tag="OQQ26_003661"
     CDS             complement(260..1099)
                     /gene="wcaA"
                     /locus_tag="OQQ26_003661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
                     /protein_id="HCS1858979.1"
                     /translation="MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYNNWEMIIVDDCS
                     TSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITRIDDDDEWTPNR
                     LSVFLAHKQQLVTHAFLYANDNVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQV
                     FTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSP
                     KKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGI
                     RGR"
     gene            complement(1192..3093)
                     /gene="wzc"
                     /locus_tag="OQQ26_003662"
                     /pseudo
     CDS             complement(1192..3093)
                     /gene="wzc"
                     /locus_tag="OQQ26_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416564.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
     gene            complement(3082..3321)
                     /locus_tag="OQQ26_003663"
                     /pseudo
     CDS             complement(3082..3321)
                     /locus_tag="OQQ26_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707956.1"
                     /note="required for the translocation of capsular
                     polysaccharide through the outer membrane; incomplete;
                     partial in the middle of a contig; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein Wza"
     gene            3630..3779
                     /locus_tag="OQQ26_003664"
     CDS             3630..3779
                     /locus_tag="OQQ26_003664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858980.1"
                     /translation="MVIEYWLSNNAGGSVTANGIAGKVTIRQLAIFKNYIKCHSIWFL
                     GVSLG"
     gene            3980..5563
                     /locus_tag="OQQ26_003665"
     CDS             3980..5563
                     /locus_tag="OQQ26_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HCS1858981.1"
                     /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
                     RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGYFLLFKAT
                     MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
                     VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD
                     HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHT
                     RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
                     HMPLEDLVQFVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
                     VQKVQIIPLHKDGEMEYEV"
     gene            complement(6015..7868)
                     /gene="asmA"
                     /locus_tag="OQQ26_003666"
     CDS             complement(6015..7868)
                     /gene="asmA"
                     /locus_tag="OQQ26_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HCS1858982.1"
                     /translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSG
                     YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK
                     QVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
                     HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGMVDASDYPHDLSA
                     AIEQINWQLQGADLPKQGIQGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL
                     TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
                     GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKFNGGQVSLPGTLD
                     ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
                     TAHVEMADTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
                     LNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
                     GNWQQLNYSLQVDQLLRKHLQDEAKRRLSDWAERNKDSRNGKDVKKLLEKM"
     gene            complement(7890..8471)
                     /gene="dcd"
                     /locus_tag="OQQ26_003667"
     CDS             complement(7890..8471)
                     /gene="dcd"
                     /locus_tag="OQQ26_003667"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004942378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HCS1858983.1"
                     /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
                     EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
     gene            complement(8563..9204)
                     /gene="udk"
                     /locus_tag="OQQ26_003668"
     CDS             complement(8563..9204)
                     /gene="udk"
                     /locus_tag="OQQ26_003668"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HCS1858984.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTR
                     MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
BASE COUNT         2201 a         2468 c         2375 g         2419 t
ORIGIN      
        1 gctaccacgt ttttattgat cactacggcg taaccgtgat ggatagtaaa gcggcggcca
       61 atggtcgcgg cagcctggat ttcataaccg aaaaagcatt cggtgataat gcgatacagc
      121 accagcagcg gggccgccca cagattgttg aggacgttct ttttgcgcca caccgaacaa
      181 aaatgagcga cgcgataggc aagaaccatg cagcacgggc gtaaactcca actgttggca
      241 cgcagatctt ccagcatctt tagcgccccc gaataccatc agccagacgt ttgccgttac
      301 gcaccgacag cagcgtcagc aaagtgcgcc aggtcatacg tttattgcgg atctggtaga
      361 gagtaaacag ctgatatttt ttgctggcgc ggtcaaattt atctttatgc ttgcggtaaa
      421 agtggaagta cccggagaat tttttcggtg acgaggtgat ctgcatttca ccgtgattga
      481 tatgcaggat ctgcgtcgcc tcttccactt tccacggttc gccgtactcc accaccatcc
      541 gcaggaagat gtcgtaatcc tgtgccgctt tcagttcggt atcgaacaag cactctttga
      601 aacgccacgc ccaggtaaaa acctgattgc caatgatatt acgtttgtag aacaggcgac
      661 gtgaatacgg cgatttggga tacagcggca aacttgccgg ttgggaatag acttccccct
      721 gacaaacgtt gtcgttagcg tacaaaaagg cgtgtgtgac cagttgctgt ttatgggcga
      781 ggaagacgct cagacggttg ggtgtccatt catcatcatc atcgatcctg gtgatgtatt
      841 ccccttgcgc cagcataatc gcctggttac gtaccgcgca cgccccgctg ttaatgtcgt
      901 tgtgaatgta ggtgatacgc ggatcgttga gggcggtgac gtactgttgc aattgttccc
      961 aggaggtgga gcaatcatcc acgatgatca tctcccagtt gttgtagtcc tggcgcagga
     1021 ccgattttat cgcccgaatc gccagttgtt ggcggttcca ggtcggcata tagattgaga
     1081 tcagcggatt gtctttcata ggttgttctc ccggcttatg agctggtttg cttgccggat
     1141 gcggcgtgag cgccttatcc ggcctacggg gcggtgcgaa tgcaggcgtc gttatttcgc
     1201 atccgactta tattcgtatt cgtaatagcc ataatcctga tacgcgctgg cgcggcggaa
     1261 gatggagttc agaatcaccc ctttcaccgg aataccgttt tgctcaaagc ggctcagact
     1321 ggtttccact tctttcaatg tgttgaccgc ataacgcgcc accattaacg tggttccagc
     1381 gtgacgacca acaattgcgg catcggtcac tgccagaatc ggcggcgtat caatcaacac
     1441 cagttcatag tttttactcg cccagctcac cagttcggca aagcgttcgc tcattaacag
     1501 ttcagaagga tttggcggta cctgaccgcg tggaatcagg tcaaatttgg caatagaggt
     1561 cggtttagca gcggtagtaa tatcgccctg accaatcaga atttccgaca ggccattaac
     1621 gttattagtg cccaacagct catgggtgta gcctttgcgc atatcgcagt cgatcaacaa
     1681 cacccgttta ttagtctggc taatgaccgc caccaggtta gcgcagacaa aggttttacc
     1741 gattgacggg ctaaccccgg tcatcatcaa cacattgttc tgcgcctgca tcatcgcgaa
     1801 gtgcagactg gtacgcagac tgcggatggc ttcaatcgac agatcggttg gattccccac
     1861 cgccagtagc tggctctgtt tatagcgttt aacccctttg atggttttga cgctatcgcg
     1921 cgctttctgc cattccgaca acgggatgct ggcatagacg ctgattccgt gttcttccag
     1981 cacttgcggg ctttcgatgc cacgattaaa caacgagcgc agcagtacac ccacgataga
     2041 aagcatcagg ccaagaataa tcgccccaag gataatcagc cctttcttcg gttttagcac
     2101 accaggctga gtgattgccg ggtcaacaat gcgcacatcg ccgacggtgc tggcctcggt
     2161 gattttcagc tcctgctctt tattcagcag ttgcatatag acctgctgcc cagactcgac
     2221 atcgcgggtc agacggacaa tctcctgctg ggttttcggc atcgccgtta cgcgaccgtt
     2281 aagtttggct ttttcgtctt ccagcgcctg acgtttctcc agcagcgtgc ggtacgccgg
     2341 gtgaactttg gtgtacagct tggagatttc cgcctcttta aaggtcagtt cgttcaactg
     2401 cgcgtcgatg ttcaccatcg aatcgagcac cgctttcgct tccagcggca gatcaacaga
     2461 atctttatcc tgacggaagg cattcagttt gttttcggca acatcgaggc ggctacgtac
     2521 ttccggtaac tgttgcgcga ggaaagcgag gcttttcgac gcttccgccg atttgtgctc
     2581 aatattttgt tcctgatagt tacgagcgat gctgttaaga atgtcgcgga tctgttcgcg
     2641 atcttcaccg gtataagtca ggctcagtac gcctgcgtct ttgccgttct ccgttaccgt
     2701 caggctgttt tgcagttggt tgatcatccc caacgtggag tatttggtga cggtaaactc
     2761 actgcccggg cgggcgtgaa tggcttcaac catcagcgtg acgccttctt ttttcagcat
     2821 ctggcccgct tgcccacggg cgctaaagcc gccatcactg ctcagggtgt agtttttgtc
     2881 atccagcaca ttaagcgtaa acacctgatc cgccatctct ttcgggcggt taaaggtagt
     2941 cactttcacc gtctcgttct gacgccccat caggcgatcc cagcccgccc cgaaaatcgg
     3001 gaacgtgttt ttgctcaccg caatatcgag gtcgagatcg tccaccgttt taccaagcac
     3061 cagacgcgaa cgaatcaact ggatctcgct ttccagcgtc atattggggc gcgctacatt
     3121 cgggcgtggg cgtaattggt caatcaggcg cggggtcagc ggataaacat tcaccatttt
     3181 gtcgagatcg aaatcagcgt cctgctgttt gatgacgtct ttgcccatcg tcgacatatt
     3241 actgcccgga agtactgtgc aaccgcttat caaggttact gacaccaata atggcatcaa
     3301 tttcattttg gatttcatca ttgtttattt atcactttgg cagagtaatt atcctgtgca
     3361 ctattaatag caatgtcgcc atgcacattt accttgcagt taattgaata aaaatttaac
     3421 tggcatcagt cctaaaaaaa ttgatttcat ccgcaggcta ttgacagaat aattcagact
     3481 ggtctttcag gcatccagac acgctaccgc ccctggcttt ttagctacca atacactgat
     3541 ttagcttaat ttttcaaacc ctctctgcat gcaatcgttg atgagaaagg gttattgcgg
     3601 aaattaactt ccgaatataa ggtgacatta tggtaattga atattggctc tccaataatg
     3661 caggaggaag tgttacagct aacggaatag caggcaaggt aacaattcgg caattggcta
     3721 tttttaagaa ttatattaag tgtcattcaa tatggttttt aggagtttct ttaggttgac
     3781 aatatttaat atagtgtctc cacatgcgat atttcttaaa taatgtttta ttattaccac
     3841 ttttaattca gggataatgt gaggttatta ccctcaaata atatgagata aatagtgctg
     3901 caacattgca tttttgcccc gatttatcca tgatcgaatt gtgacatttg tcatacaacg
     3961 aataggtttt gtacttacta tggaatggat tgccgatccg tctatctggg ccgggttaat
     4021 cacgctgatt gtgatcgaac tggtcctcgg cattgataac ctggtcttta ttgccatcct
     4081 cgccgaaaaa ctaccgccga agcagcgcga ccgcgcacgg gttaccgggc tgctgctggc
     4141 gatgttaatg cgcctgttac tgctggcgtc aatctcctgg ctggtcaccc tgacgcaacc
     4201 gctattcagc tttcgctcgt ttacctttag cgcccgcgac ttaatcatgc tgtttggtgg
     4261 ttacttcctg ctgttcaaag ccacgatgga gctgaacgaa cggctggagg ggaaagacag
     4321 caataacccc acacaacgca aaggtgcgaa gttctggggg gtggtgacac aaattgtggt
     4381 actggacgcc atcttctcac tcgactcagt gattaccgcc gtcgggatgg tcgaccattt
     4441 actggtcatg atggccgccg tggttatcgc tatcagcctg atgttgatgg ccagcaagcc
     4501 gttaacgcaa tttgttaaca gtcacccgac catcgttatt ctctgcttaa gcttcctgtt
     4561 gatgattggc tttagcctgg tggcagaagg tttcggcttc gtcattccga aaggctacct
     4621 gtacgctgcc attggtttct cggtgatgat cgaggcgctc aatcagttgg ctatctttaa
     4681 ccggcgacgt tttctttccg ctaaccagac gctacgccag cggactaccg aagcggtaat
     4741 gcgcctgctt agcgggcaaa aagaagatgc ggaactggac gccgaaaccg cgtccatgct
     4801 ggtggatcat ggtaaccagc agatctttaa tccgcaggaa cggcggatga ttgagcgggt
     4861 acttaatctt aaccagcgta ctgtcagcag cattatgacg tcgcgccacg atattgagca
     4921 tatcgatctc aacgcgccgg aagaagaaat ccgccagttg ctggagcgaa atcagcatac
     4981 gcggctggtg gttaccgacg gtgatgacgc agaagatttg ctcggtgttg ttcacgttat
     5041 cgacctgcta caacagtcac tgcgcggcga accgctcaac ctgcgggtgt tgattcgcca
     5101 gccgctggtg ttcccggaaa ccttgccgtt gttacctgcc ctagagcagt tccgtaatgc
     5161 ccgcacgcac tttgcttttg tagtggatga gtttggttca gtggaaggga ttgtgacatt
     5221 aagtgacgtc actgaaacca ttgccggtaa cttaccgaac gaagtggaag agatcgacgc
     5281 ccgccatgat attcagaaaa atgcggacgg ttcctggacg gcgaatggtc atatgccgct
     5341 ggaggatctg gtgcaatttg tgccgctacc gctggatgaa aaacgtgaat atcacaccat
     5401 tgccgggctg ttgatggaat atttacagcg tattccaaaa cctggcgaag aagttcaggt
     5461 gggggattat ttgcttaaaa cgttgcaggt ggaaagccat cgcgtgcaga aggtgcagat
     5521 tataccgctg cataaggatg gcgagatgga gtacgaggtg tgatggtatc ggccatttta
     5581 cccaatgctg cgtaacgcct tataacttca gcaatgaagc gttgtctgtg gtacatggac
     5641 atcacagcgg gggtgtgggt ccggctgtaa atcgccgaat cgtttcctgt aggccggggc
     5701 agcccacatg gatgtgggct aagggcgcgt tttacaggga tgttacctcg cgcccgtacc
     5761 cgatagccga aaggaataag atgagggaac cgcgccagcg gcgatttacc gccgggagcc
     5821 cgggttgcca gggtggtggc gattgagcca ccctggcacg ttcaccggct tgagccttcc
     5881 atagtagcga ggaacatcaa gtgaacggaa cagccttcga tcttacatat tcagaatata
     5941 atggtgccgc cgcgaacgcc tgatgcgacg ctttacgcgt cttatcaggc ctacaggaca
     6001 gctcaccagg taacctacat cttctccagc aacttcttca catctttgcc attgcgggaa
     6061 tctttattcc gctcggccca gtcactcagg cgacgtttcg cttcgtcctg tagatgtttg
     6121 cgcagtaact gatccacttg caggctgtaa ttgagttgct gccagttgcc ataaacccgc
     6181 agcggtactg gcgtttcttt gaggaaatca atcagtttgc tttccccgtt ccagccaccc
     6241 acgacccgaa tatcaaactg ggtgtcgcag gtttgatctg ccagattcaa catgccttcc
     6301 cctgtcagcg ccagcacagg cgattgacct tgcatgtcgt ttaacgtcac gacgccatcc
     6361 ttcaacgtca aatcggtggt aaagcggtca agccgcgtca cgttatcgaa gttttcagcg
     6421 gccttcacat caccaccatt acgttctacc gcttgctgaa tcatctgctg gaagttcatc
     6481 ccttccatgc gcgtatcggc catttcgaca tgcgccgtcc cctgccagtt gtggcggaat
     6541 gcgtcggcat ctatgtcagc accggagaaa tcaccagcca gtgacatctt tccggtcaac
     6601 gaaatcggat agttaaacgc cttcagaatg gtaccaatct caacgttttc cagccgtggc
     6661 tggaagttta tccgcggatt tattgatgtc gcgtccagcg tgcccggcag tgaaacctgt
     6721 ccaccgttaa acttgccctg cagttgagta atttccagca aacccgactt gttggtcatt
     6781 tgcgtggcaa catctgtaaa attcattccg cgccagcgca cgttactggc ctgcaacaaa
     6841 atatcagccg taaagccttg cagtccctga taggccggtt catcaatacg cgaagaaata
     6901 accgggcgcg gcaacgttga ttggctctgc ccctgctgcg cggcaccgtt ttcaccattc
     6961 gcggtttcat taagcgggat gaggttgtca agattcagtt gcgggaattg cagtctcagc
     7021 tgccattcag gtttctctgt cagcgtgacc tgtgcttgcc cgctcagcgt gctgtcattg
     7081 gcggtcaagc tgatttggtt aaatgaaagg cgtttatgtg actcctgcca ctgggcctgg
     7141 aaactcccct gcccctgaat accttgtttt ggtaaatcgg caccctgcaa ctgccagtta
     7201 atttgttcaa tagccgccga taaatcatgc ggataatcag aagcatctac cataccgtta
     7261 agggatatcg tgagatcgcg ctgatcgcga ttaacccgcc cggagaactc aaatgaacca
     7321 cgatgttggg gatcttgttc catttgcagg cggatattgc ggattgtcac ctgctcgtca
     7381 tcttcatgct ggaacaccag aacgctgtcc gccaccttaa gactggatat atcaaacgac
     7441 catccgcgat cgtctgacag atctggcaag gtattgtcgc gcggtgcaac cggagcgtct
     7501 tcactgcgca ccgcttccgt ctgcggcgtc agttggatca ctgccccttt tagcatcacc
     7561 tgcttaacgc tcagttgatg actcagtagt ggtaaaagcg ccacgtccag acgcatgttg
     7621 tcggcgcgaa ccagtggctg gctcgcgccc tgggcggtga gagacattcg cccggagagg
     7681 atactaagct gcggccagac gtgccaacgc agtggcccgt cgagctgcaa ttgataaccg
     7741 ctacgtgcag caacttgctt gaccatatag tcgcggaaat cattcggatt caccagcaac
     7801 actaacgcag ataacccggc caccagcacg accaggagta tcatcagcgt cgtcagaaat
     7861 cgtctcatgg tatcctcaat gggcctgaat tagtctttat cgattcggct ggctaccgcg
     7921 ccctgctggt tgcgatattt cgcatcttca cggcggttgt aaggtcgcgc cgccgggccg
     7981 gaaagcggct caaagctcag cgcaccaatt aacatgccag ggcgcaaagc gagcggcagt
     8041 ttaccagagt tataaaactc cagcacaatg cagccagacc agcctggatc gatacggtgt
     8101 gcggtaacgt gtaccatcag ccccagacgc gccaaagagg aacgcccgtc cagccagccc
     8161 accagatcgg ctggcagcgt caccgactcc agcgtcaccg ccagcgccag ctctcctggg
     8221 tgaagataga acgcctcgcc ctcgtcgaga acgatctcat cgctcatcac gcggtcaagc
     8281 gcggcgctca cttcatcttt gggaccgctc agatcgataa acgctgccgt gtgaccacgg
     8341 aaggtacgaa atttattgcc caggcgtaca tccaccgtcg cgccgttaat acgctccact
     8401 ggcggacgtg ggttgatcga caaacggcct tcatcaagcc aggcttcaat atctcggtca
     8461 cacagacgca tggcattttc tcctttcgcg catcactccc ttaacgccaa ttacgtcaag
     8521 ggcataccag gttatcactg aacggtacac aatttatcaa gcttattcaa agaactgact
     8581 tattttcgct ttcaatatat cgatcgcgat gcggtttttc ccgccgcgcg gcacgataat
     8641 gtccgcatat tgtttagaag gctcaatgaa ttgcaggaac atcgggcgca cggttttttg
     8701 atattgcgcc atcacggaat ccattgaacg cccacgctcg ttaacgtcac gcttgatgcg
     8761 gcgcatcagg cagatatcca gcggggtatc aacgaaaatg gagaagttaa gttcgtcacg
     8821 caaacgcgca tccgtcagca acaaaatgcc ttcgagaatg atgaccttct tcggctcaac
     8881 cgtcaccgtt tctttcatac gcgtatgttc aacatagctg taaaccggca ggtcaattgc
     8941 cgagccgcgt ttcaacgctt gtaaatgctc aagcaacagg ctgtgatcca tcgcgctagg
     9001 atggtcgtag ttggtcttaa cgcgttcttc catcgacaga tggctttgat ctttgtaata
     9061 gcagtcttcg ggaattacgc cgatgtgttc atcaccgact tgctcacgta attcacgata
     9121 aagggtactg gcaataagac tcttgccgga agccgatgcg ccagcgatac cgataatgac
     9181 gcactgatga gactgatcag tcatatattt agcgacctga ttaacctgga tgttaggaag
     9241 ggggcgacga agcgccaaac gcggcaatta tagggatttc atccgccaga taccagtcga
     9301 atagcgttgc cgcgcgctca gagttaattg ttgacgaaga attcccggtg gcaaattacg
     9361 ttgatcagtt ttatacaagg taaaaaatgt tatacgcagt tgcgcaaatt atccgccttt
     9421 acgtcacttt atgagcaatt cgcatataaa atgtaaaact ttt
//
LOCUS       DAJVTL010000149         9426 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.151, whole genome shotgun sequence.
ACCESSION   DAJVTL010000149 DAJVTL010000000
VERSION     DAJVTL010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9426
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.151"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(15..2558)
                     /gene="mdoH"
                     /locus_tag="OQQ26_003669"
     CDS             complement(15..2558)
                     /gene="mdoH"
                     /locus_tag="OQQ26_003669"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HCS1858985.1"
                     /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED
                     DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
                     HFDVYILSDSYNPDICVVEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
                     WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
                     RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
     gene            complement(2551..4086)
                     /gene="mdoG"
                     /locus_tag="OQQ26_003670"
     CDS             complement(2551..4086)
                     /gene="mdoG"
                     /locus_tag="OQQ26_003670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HCS1858986.1"
                     /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYETPK
                     SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
                     VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
                     KFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS
                     AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
                     KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
                     IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            4480..5637
                     /gene="mdoC"
                     /locus_tag="OQQ26_003671"
     CDS             4480..5637
                     /gene="mdoC"
                     /locus_tag="OQQ26_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706958.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HCS1858987.1"
                     /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
                     SLWLTLFNDFIHSFRMQVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
                     TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
                     RNNLENSDKMNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
                     FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
                     VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
     gene            complement(5645..7126)
                     /gene="clsC"
                     /locus_tag="OQQ26_003672"
     CDS             complement(5645..7126)
                     /gene="clsC"
                     /locus_tag="OQQ26_003672"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsC"
                     /protein_id="HCS1858988.1"
                     /translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
                     EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDN
                     NTPGLDDILRLLDSHPRIEVRIFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
                     TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
                     PEGEMADRIELPASWHNDAMTHRYLRKMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
                     GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
                     SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
                     FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
                     WGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL"
     gene            complement(7068..7601)
                     /gene="ymdB"
                     /locus_tag="OQQ26_003673"
     CDS             complement(7068..7601)
                     /gene="ymdB"
                     /locus_tag="OQQ26_003673"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HCS1858989.1"
                     /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
                     ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL
                     NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
                     EENAHLYERLLTQQGDE"
     gene            complement(7696..8008)
                     /locus_tag="OQQ26_003674"
                     /pseudo
     CDS             complement(7696..8008)
                     /locus_tag="OQQ26_003674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706955.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
     gene            complement(8129..8461)
                     /gene="csgC"
                     /locus_tag="OQQ26_003675"
     CDS             complement(8129..8461)
                     /gene="csgC"
                     /locus_tag="OQQ26_003675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706954.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HCS1858990.1"
                     /translation="MNALLLLAALSSQITFNTTQQGDVYTIIPEVTLTQSCLCRVQIL
                     SLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPEDRVKIVVTVSDGQALHLSQQ
                     WPPSSEKS"
     gene            complement(8520..8924)
                     /gene="csgA"
                     /locus_tag="OQQ26_003676"
     CDS             complement(8520..8924)
                     /gene="csgA"
                     /locus_tag="OQQ26_003676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curlin major subunit CsgA"
                     /protein_id="HCS1858991.1"
                     /translation="MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNSALALQT
                     DARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSATLDQWNGKNSEMTVKQFG
                     GGNGAAVDQTASNSSVNVTQVGFGNNATAHQY"
     gene            complement(8965..9420)
                     /gene="csgB"
                     /locus_tag="OQQ26_003677"
     CDS             complement(8965..9420)
                     /gene="csgB"
                     /locus_tag="OQQ26_003677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curlin minor subunit CsgB"
                     /protein_id="HCS1858992.1"
                     /translation="MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFN
                     QAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDA
                     SISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR"
BASE COUNT         2356 a         2447 c         2215 g         2408 t
ORIGIN      
        1 aggcaactac gtttttattg cgaagccgca tccggtttac gcaatgccag tggattgagc
       61 tttatccctt cgtaataact cacccatgaa gaatatctct ccggggaatt ccagacgcgg
      121 aaatgcagac gggccatcgt caccggatcg cttagcagca ccaggcgacg atcgcgattc
      181 agcttctctg gcgtctcgtt aagcgcctgt tcaacgtggc ggtcacgggc gatttccagc
      241 accttactgg cgcggtgacg cgcggtcgcc attgcggttg ccagagcgtt aaatgacggg
      301 ttaaacaccg cgtgcataaa accatcatca agggagcgtt gacgattcat ctcaaggaag
      361 cgatcggtat caaccagcac ctgcggcggt gaatactctt ccgggatcag gaacagtttc
      421 cagcgtttgg ttcgcagacc aacggtggca cggctggaaa tcaccgaaac aaacggtgac
      481 aggatcaacg agaagacaat cggtgccagc cagaacagga aacgcagatc cagccatgcc
      541 atcccaacag cccacactaa ccctaacagc agctgtgagc cgtggcgttt gaacgcttca
      601 ccccaggaag tggagtcatc atcacgctgc ggtgaattcc acacaacttc ccagccaagg
      661 aacgcgctga cgacgaagac cgtatggaac agcatgcgta ccggagccag cagcacggaa
      721 aacagcactt ccagcagcaa cgataatgta acgcgccaga agccgccgta ttctttcgtt
      781 cctttgcacc agataagcaa aatgctcaat aacttcggca ggaacaacag caccatggtc
      841 gaagcaaaaa gtgcaatcgc cagctcagga cgccactgcg gccacaccgg gaacaactgc
      901 cgtggttgca ggaagtattg cggttcggtt aacgcatgca ctacctgcaa tgcagtagag
      961 agcgcgagga acataaacca cagcggagcg gagagataag acatcacgcc cgtcaggaac
     1021 accgcacggt gaaccgggtg catacccttc accaggaaca gacggaagtt catcaggtta
     1081 ccgtggcacc agcggcggtc acgttttagc tcatcaagca agttaggcgg caattcttca
     1141 taagaacccg ggagatcgta agcaatccag accccccaac ctgcacggcg catcaacgcc
     1201 gcttctacga agtcatgtga caggattgaa ccggcaaagg aaccttcgcc cggcagcgga
     1261 gccagtgcgc agtgctcgat aaacggtttc acacggataa tcgcgttatg tccccagtag
     1321 tgcgactcgc caagttgcca gaagtgcaaa ccggctgtaa acagtggccc atacacgcgg
     1381 gtcgcgaact gctgacagcg cgcatacagc gtatccatac cggacgcttt cggcgacgac
     1441 tgaatgatcc cggcgttcgg gttggcttcc atcaggcgca ccagcccgca caaacaatca
     1501 ccggtcatta ccgagtcagc atccagcacc accatgtagc tgtactggct gccccagcga
     1561 cggcagaagt catcgatatt accgctttta cgcttcacgc ggcgacggcg gcggcgatag
     1621 aaaatctgac cttcgccacc gacttcagcg ataagctcca tccaggcttt ttgctctacg
     1681 acgcagatat ccgggttata actgtcactc agaatgtaga catcaaagtg tttggcattc
     1741 ccggtggctt ttactgattc ccacgttgca cgcaggccag caaaaacacg gttcacgtct
     1801 tcgttacaga taggcatgat caacgccgtg cgatgctccg ggtttaatgg ttcatcgcca
     1861 actgttgacg ctgatatact gtatttatcg cgaccaataa gcagttgcag gaagcccatc
     1921 aacgccgtcc agaatccggc ggacacccaa cagaacagta ccgcaaagag gatcaggata
     1981 ccggtttgca gcatataagg cagaagctgc ataaaggaaa cccacaaatc ctgaccaacc
     2041 atatccatag gattaatcag cgcccaaccc tgataaggaa gaatggtctt catataccag
     2101 gtcgcgacga cagtttgcgc gagcgtcagg atcaacagaa tataacggcg gatggtaccg
     2161 acggtacgcc acttttgctc gctctcctgc tcttctttgg tcaaacgagc cagatagcgc
     2221 ggcgtgacat cgcgtccacg caggcgatcc cagaaacggc ctaccgggtt ggtacgccac
     2281 gggtcgggaa acatcgagga gcgttttgct tctggcatcg ccttaagctg atcgcgccct
     2341 tcgtcgtctt taattaactg tccatcagca agtgaatctg gccaggcttg ttccagacgc
     2401 gcctttaccg agccttgcgg ggagtcatcc tcccgcgccc aggtgcggtg ttcggcatcc
     2461 agcgcctgat gaacggcgcg gatatcagtc ttcggcaatg ccgctttctc gcttgcggcg
     2521 atgggcattg cgtcaatgta ctcagttgtc ttattcattg gcaggtaact ggtagctcca
     2581 ggtttcactc aacgtctgat cggcattcac cagcgcagca cgcatttcag tggttttctt
     2641 ggcatctttc actttcacac gcatcaccag acgccagcct ttggtaaccg ggttatagcg
     2701 caccgtgctt tcaactatct caccattatc accaatgctg gtttgcgctg tgaccggggt
     2761 atcctctggc agttttttca tctctgcgcc ggtaaaatcg accacaaagg cgatagtacc
     2821 gtcaggctgg cggatcaggt tcgactgctt cacatccccc gttgaacgac gcgtttgttg
     2881 cacccatgcg ttatctggcg catgcagttt gtcttcatca cggctgaagg tgatggtgta
     2941 tttaaagttc atctctttac ccggctccgg cagttgatcc ggcgtccagt aagcgacgat
     3001 gttatcgtta gtttcatcgt tggttggaat ttccaccagc tcaacgctgc ctttgcccca
     3061 ctcccctttc ggagtcaccc atgcgcttgg acggagatcg taacgatcat cgagatcttc
     3121 aaagcgggag aaatcacgac cgcgctgcaa cagaccaaag ccttgcgggt tttccatgga
     3181 gaagctgctg accgctaaat gtttcgggtt attcaacgga cgccagatcc attcgccatt
     3241 accggcatgg atagagagac cgttagagtc gtgcaactcc ggacgatagt tatttgcagg
     3301 cgacggttgg ttcggcccaa acaggaacat actggttaac ggtgcaaccc ccagtttgcc
     3361 gactttatcg cgcagataga ttttcgactg cacatccaca accgtgtcac gccctggcat
     3421 aaccacgaat ttgtaagcgc ctgtcgcgcg cggcgagtca agcaatgcat aaatggttaa
     3481 acgtttatca gtcggttttg gacgctcgat ccagaactct ttgaagcgtg gaaattcttc
     3541 acccgatggc aaggcggtat caattgccag gccgcgggca gaaaggccat aaacctgacc
     3601 tgcaccaatc acgcggaaat agctggcccc gagcatgctg acgatttcat cgtttttatc
     3661 tttgctgttg atcgggtaaa gcactttgaa accggcaaaa ccaaggtctt ttaccgtgtc
     3721 tttgtcatgc tgaacatcgc cgaaagtgaa ataatccggg ctgtatttga ttcgtttgac
     3781 tgcagtggca gtcacttcat ttattttgac cggagtatcg aagtacatac cctgatggta
     3841 gaactcgagt ttgaatgggg tcttcagatt gttccagtac gctttgtcat gattaaactg
     3901 gatctgctga tagtccgcgt atttcatatc gcggaaaacg gagggcaagt tgcttttggg
     3961 cgtctcatag cctttcccgg ctaaggattg agcttgcttt gcgacatcat caatactgaa
     4021 agcccagctt gaagatgtat acagggttaa cattactgca gcactcaacc aacgcatttt
     4081 catcatttgt agtttatgtt tcataattag taagcacttc cccctttgtg tgcttatatc
     4141 gatccgatct attttaatgg ataaccagcc attccgacaa ctgaatcccg ttatcgttca
     4201 gcacgctggc tcatggatta agcacctgat tgcaaccgtt ttcactttcc gtgcttctcc
     4261 taaagacaga agcatcgact tcgtgtaggg tttgccagca aatttattta tcaaccgtct
     4321 tacagacgct tccattctgg ttagtggtag cgatgatgct atgcataaaa accttgaagc
     4381 ctgcgcctgg cgcggtcagg tcggtgtcgc tatggcaaca agcctaaagg cataacccga
     4441 cagggataag acgaaaaatc cgagattagt taaccatata tgaatccagt acccgcgcaa
     4501 cgtgaatatt tcctcgactc catccgcgcc tggctgatgt tgttagggat cccttttcat
     4561 atttctttaa tctattcgag ccatacatgg catgtgaata gcgccgaacc gtcattgtgg
     4621 ctgacccttt ttaatgactt catccactcg ttccgcatgc aggtattttt cgttatatcc
     4681 ggatactttt cctacatgct ttttttacgc tatcccttga aaaaatggtg gaaagtacgt
     4741 gtcgaacgtg taggtatccc gatgttaaca gccatccccc tactgacatt accgcaattt
     4801 attatgctgc aatatgtcaa agggaaagcg gaaagttggc ctgggctgtc attgtatgac
     4861 aaatataata cgttggcctg ggaattaata tcacacctgt ggtttttact ggtgttagta
     4921 gtcatgacga cgctgtgtgt atggatattt aagcgcatca gaaataattt agaaaattct
     4981 gataaaatga ataaaaaatt ctcgatggta aaactatcgg tgattttttt atgcctcggc
     5041 atcggctatg cggtaataag aagaacgatt tttattgtgt atccgcccat tctgagtaat
     5101 ggcatgttca attttattgt catgcaaacg ctattttatt taccgttctt tatcctcggc
     5161 gcactggctt tcattttccc tcatcttaaa gccttgttta ccacgccgtc tcgtggctgt
     5221 accctcgctg cagcattggc gtttgtcgct tatttactca accagcgcta tggcagtggc
     5281 gatgcctgga tgtacgaaac cgagtcggtg atcaccatgg tcctcggcct gtggatggtg
     5341 aatgtggtct tctcctttgg ccaccgtttg cttaacttcc agtcagcgcg ggtgacttat
     5401 tttgttaacg catcgctgtt tatctatctg gttcaccacc cgttaacgct gtttttcggc
     5461 gcatacatta caccgcacat cacctccaac tggcttggtt ttctctgtgg cctgatattc
     5521 gtagtaggga ttgcgataat tctgtatgaa attcatttac gcatcccgtt actgaagttt
     5581 ttgttctctg gtaaaccggt tgttaagcgt gagaacgata aagcaccagc ccgttaagcc
     5641 acatttacaa taaccattcc acgggcaata tcgacgccag tctgaccata acccgcttcc
     5701 agaaactggt ggcgggttct tttttgagaa taatctcttt ctttgcatga cgatcaaccc
     5761 agttgatccg tccccacctg tccagacgga gctgccaggc cgcatcatac tggctctgaa
     5821 taaagcgttt atcaattaac tgtgccagcg tttcgctctc tatcacgaag cccatttcag
     5881 tattgagcaa tgttgaacgc ggatcgaaat tgaaagagcc gataaacacc gttttaccat
     5941 cgatgctaaa ggttttagca tgcaggctgg ctccggaatt accggttatg ccgcgatcgt
     6001 gtaacgtact actttgttca cgcgtcggct tgagttcata taattccacg ccatagcgga
     6061 gcaatttttt gcgccagcgc gcgtatccgg catggacgac agcaacatcg ttagcggcaa
     6121 gagaattggt taggatcgca atctttaccc cttttctcac catccgtaag agttgcgcca
     6181 cacctgcgcg tgtcggtaca aaataggaag agataatatc gatgcgttca ctgggtgagc
     6241 ccatgatatc gaacaggcgc tgcggtaaca gtgaatgccg ttttgccttg ccctcccctt
     6301 tcgccggatc atcacttaat aaacgtgttt tcgcccagat aagcggcaac gttccatcaa
     6361 ccagatgatt tataaacgga ctggattcca ttttgcgtaa gtaacgatgc gtcatggcat
     6421 cgttatgcca ggaggcgggt aactcgatgc gatccgccat ttcaccttcc gggacatcca
     6481 gcacctgctg taagggtgaa accgatttgc aataccagta gcgggcgaaa tcatcggcaa
     6541 cgtcctctac tacgggtcct attgccatga catctaaatc cgaaaaaagt ggctcctccc
     6601 ctgccccaaa ataggcatca ccaatatttc gcccccctac cagcgtcacc acgccatcga
     6661 cagtgaaact tttattgtgc atccggcgat tgagacggga aaagtcggtg atataaccaa
     6721 gcggacgcag caagcgaaac gagaaaggat taaaaatccg gacttcaatg cggggatggc
     6781 tgtcaagcaa gcgtaaaatg tcgtcaagtc cgggcgtatt gttgtcgtcc agcaacaaac
     6841 ggacgcgaac gccacgcttt gctgcggcta acagggcgga aaacagtaac cgacccgaca
     6901 tatcgtcctg ccagatgtaa tactgaacat ccagcgtatg ctctgccatt tcggccagac
     6961 gataccgggc ggcaaacgca tccagacttt tctccagagg gaaaagacca cactgaccgg
     7021 gatgttgcga acacagtggc agcaccgcgc tcgccagccg gggcaaatca ttcatctcct
     7081 tgttgggtaa ggagtctttc gtagaggtgg gcgttttctt catcataaca gacaaagtat
     7141 acctgttcgg gtaaagcgtg acgggtaata aattctgaaa cggtttttac tgcgatttca
     7201 gccgctgccg cacgagggta accataaacc ccagtactga ttgcaggaaa agccactgac
     7261 gtatagctgt ttgccgccac cagtcgtagg ctattgagat aggcatcctg caaaagctgg
     7321 tcttcgtttt gttcaccacc acgccagact ggcccgacgg tgtgcactac ggctttagcg
     7381 ggaagatcgc ctgcaagcgt aataacggca tgccccgtag ggcaatcgcc ctgctgttgc
     7441 ctgactttta aacaggcatc cagtagggcc ggacccgctg cgcgatgaat ggccccatcg
     7501 acgccgccac ctcccattaa tgaaggatta gccgcattca caatcacatc aacggccagt
     7561 ttggtaatat caccctgcac aacatgaata cgcgttttca taacgcctcc ttacaccttc
     7621 ttgtttctta agtgtacagc aggctttttg gttaaatcgc atttttctgc tcagcaacgt
     7681 gagttgttca gaaacttagt tatattcgat gttcattaca gccagctttt tctgtttatc
     7741 aagatactgc acttttactg aggctatttg cgcgtttttg acattgccgc tcattaacgc
     7801 tttgctggag taggttttgc ccggacatag aaccattctg tgggcagttc atttctacgg
     7861 gtgatgactg ggtgctgacg tcacatgccg gttccacaat ttggccataa aaatggatca
     7921 cgcccccttg cgcggtgctt cctgcaatgg caataaaagg aaaaaacaaa ctgccgagca
     7981 taagagagtc taaaaaaggt ctgaacattt attctatttc ctcaatgatt agtcatcctt
     8041 gagggttgtg ttatccatac tttcaggttg gctgattcgc agcagaccat tctctccaga
     8101 ttcatcttat gctcgatatt tcaacaaatt aagacttttc tgaagagggc ggccattgtt
     8161 gtgataaatg aagtgcctgt ccatcagaaa cagtaacaac tattttcacc cgatcttccg
     8221 gggaaatatt taaactcagc ttcgtcaaag caatgggttg attagcaggc aatgagaggg
     8281 tcttttcttg cttcgtctga ctttgccctg aactgccttc gcgcagggac aatatttgta
     8341 ctctgcacag acaagattga gtaagagtga cttcaggaat aatggtatac acatcccctt
     8401 gctgggtcgt attaaaggtt atctgactgg aaagtgccgc aaggagtaat aacgcattca
     8461 tattcttctc ccgaaaaaaa acagggcttg cgccctgttt ctgtaataca aatgatgtat
     8521 tagtactgat gagcggtcgc gttgttacca aagccaacct gagtcacgtt gacggaggag
     8581 ttagatgcag tctggtcaac tgcagcaccg ttaccaccac cgaactgttt aaccgtcatt
     8641 tcagaatttt tgccgttcca ctgatcaaga gtagcgctgt taccgaagcc acgttgggtc
     8701 agatcgattg agctgtcatc cgagccctga ccaacatctg caccattacc gccgccatgc
     8761 tgggtaatag tcaagtcaga gttacgggca tcagtttgca gagcaagtgc agagttaccg
     8821 ccaccaccgt ggttaccgcc gccgccgtac tgaggaacaa cacctgccag agcgctaccg
     8881 gagaatacga ttgctgcaat tgctgctact tttaaaagtt tcatgtaaaa cccccatcgg
     8941 attgatttaa aagtcgaatg gaaattaacg ttgtgtcacg cgaatagcca tttgcgactg
     9001 tctctgcact acaattgccg ttttttgagt accatactgt gtaatatttg ctttattacc
     9061 agaacctttc tggataatca tcgcagtatt accataagca ccttgcgaaa tactggcatc
     9121 gttggcactg cccgcctgat caatatatgc aaggttataa tctcctgtct ggtcaatctt
     9181 tgcccggttg ctactacctt cttgcgcaac aaccgccaaa agttttgagc ctccctgccg
     9241 taactgagca ctattattag tcccagcttg accaattatg gctgcctgat taaatgaaga
     9301 cttactcaat tcatttaccg cgaagttata ttctgaatta gctaaatcat aacctgctgc
     9361 ggctgcaatc ccaggcgcac ccagtattgt taacatcata aataacaatt tgtttttcat
     9421 gttgtc
//
LOCUS       DAJVTL010000150         9203 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.152, whole genome shotgun sequence.
ACCESSION   DAJVTL010000150 DAJVTL010000000
VERSION     DAJVTL010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9203
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.152"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1297)
                     /locus_tag="OQQ26_003678"
     CDS             complement(<1..1297)
                     /locus_tag="OQQ26_003678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010723187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
                     /protein_id="HCS1858993.1"
                     /translation="MNRISRYYFHRSVLSLLISAMIYAPPGMTAFTSNVIGVVNDETV
                     DGSQRVDERGTTNNAHIINHGNQEVYGGISNGSIIDTGGHQEVSGHGSYQGQANNTVI
                     NGGSQTISEGGIFTGTIINDKGTMSVLTNAKADATRIDNGGAMDVAGNATNTIINGGT
                     QNIYNHGIATGTNINSGTQNIKSGGKADTTNIASGSKQVVEKGGTATGSNIRAGGTLI
                     VDTGGIAHGVYLDTGSALVVNTGAGTDIDGYQRSSHFTITGGRAGHVVLENTGELTVV
                     AQTSAVDTIVDAGGKMIVHEEAVAYTTRLNNGGTLDVREKGSATGIQQSSQGALVATT
                     RATRVTGTRADGVSFSIEQGAANNILLANGGVLTVESDTTSAKTQVNAGGREIVKTKA
                     TATGTTLTGGEQIVEGVANETTINDGGIQTVSANGEAIKT"
     gene            complement(1362..1481)
                     /locus_tag="OQQ26_003679"
     CDS             complement(1362..1481)
                     /locus_tag="OQQ26_003679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HCS1858994.1"
                     /translation="MPLSYAGYHHFIMMSLVSGEHNTPALSLQDESPGLVPAG"
     gene            complement(1442..1627)
                     /locus_tag="OQQ26_003680"
     CDS             complement(1442..1627)
                     /locus_tag="OQQ26_003680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858995.1"
                     /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYLKRVIFYPTTLQR
                     TACKKCLFLMRDIIISS"
     gene            1728..1901
                     /locus_tag="OQQ26_003681"
     CDS             1728..1901
                     /locus_tag="OQQ26_003681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858996.1"
                     /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIED
                     EIIVCATYLIPDI"
     gene            1903..2247
                     /locus_tag="OQQ26_003682"
     CDS             1903..2247
                     /locus_tag="OQQ26_003682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415690.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HCS1858997.1"
                     /translation="MKKKILAFGLILALFCSTPAMADMNRTTKGALLGAGVGLLTGNG
                     VNGVLKGATVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGILTGNGLEGAIKGAMI
                     GGTGGAILGKMK"
     gene            2251..2586
                     /locus_tag="OQQ26_003683"
     CDS             2251..2586
                     /locus_tag="OQQ26_003683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmgD family protein"
                     /protein_id="HCS1858998.1"
                     /translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
                     AKTDSAQVAEIVAVMGNASVASRDLEIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
                     DTMRAIGKK"
     gene            complement(2642..4994)
                     /locus_tag="OQQ26_003684"
                     /pseudo
     CDS             complement(2642..4994)
                     /locus_tag="OQQ26_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707067.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(5721..5939)
                     /locus_tag="OQQ26_003685"
     CDS             complement(5721..5939)
                     /locus_tag="OQQ26_003685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1858999.1"
                     /translation="MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTI
                     NLLNALVWLAINLVNRLRERLVSHRDQQ"
     gene            complement(6071..7594)
                     /locus_tag="OQQ26_003686"
     CDS             complement(6071..7594)
                     /locus_tag="OQQ26_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707066.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1859000.1"
                     /translation="MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANN
                     INHILEEASQATQTAVNIAGKECDLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLP
                     GNRVLLSRIPVVPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
                     PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLI
                     DKGFGILIFILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGT
                     LRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEG
                     FHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNIL
                     HENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLAR
                     KLSISIVAEGVETKEQLDYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE"
     gene            complement(7927..8175)
                     /locus_tag="OQQ26_003687"
     CDS             complement(7927..8175)
                     /locus_tag="OQQ26_003687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859001.1"
                     /translation="MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLK
                     DETSVILSDLYLQILQYIEIHKTTLTDIIINDRESMLS"
     gene            complement(8288..8554)
                     /gene="ariR"
                     /locus_tag="OQQ26_003688"
     CDS             complement(8288..8554)
                     /gene="ariR"
                     /locus_tag="OQQ26_003688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm/acid-resistance regulator AriR"
                     /protein_id="HCS1859002.1"
                     /translation="MLEDTTIHNAITDKALASYFRSSGNLLEEESVVLGQAVTNLMLS
                     GDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM"
     gene            complement(8583..8855)
                     /locus_tag="OQQ26_003689"
     CDS             complement(8583..8855)
                     /locus_tag="OQQ26_003689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YmgA"
                     /protein_id="HCS1859003.1"
                     /translation="MKTSDNERIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAE
                     EDAFRRDLIDSIIDDFSNSDSGGPNRRTATVDNKSMFNGKKINRIH"
     gene            complement(8898..9134)
                     /locus_tag="OQQ26_003690"
     CDS             complement(8898..9134)
                     /locus_tag="OQQ26_003690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YcgZ"
                     /protein_id="HCS1859004.1"
                     /translation="MHQNSVTLDSAGAITRYFAKANLPTQQETLGEIVTEILKDGRNL
                     SRKSLCAKLLCRLEQATGEEEQKHYNALIGLLFE"
BASE COUNT         2544 a         2142 c         1889 g         2628 t
ORIGIN      
        1 ttgtttttat tgcctctccg ttagctgaaa ctgtttgtat tccgccgtcg ttaattgttg
       61 tctcattcgc cacaccctcg acgatttgtt cgccgccggt gagcgtcgtg cctgtcgcag
      121 tggcttttgt tttgacgatc tcccgtccgc ccgcattgac ctgtgttttg gcggaagtgg
      181 tgtctgactc cacggttaac acgccgccat ttgccagcag gatattgttc gccgcaccct
      241 gctcgatgct gaacgagacg ccatcagcgc gtgtccctgt gacccgcgtc gccctggtgg
      301 ttgcaaccaa cgcgccctga ctactctgct gtatccccgt tgcgctgcct ttctcccgca
      361 catcgagtgt gccgccattg ttaagtctgg tggtatatgc tacggcctcc tcgtggacaa
      421 tcatcttacc gccagcatca acgatggtat ctaccgccga ggtttgagct acgaccgtca
      481 gttcgccggt attttccagc acaacatgcc cagccctgcc tccggtaata gtgaagtgag
      541 atgacctctg gtatccgtca atatcagtcc ccgcgcccgt gttgacaact aaagcgctcc
      601 ccgtgtccag gtaaacccca tgtgcgatac cgccggtatc gacaatcagc gtgcctccgg
      661 cgcgaatatt gctgccagtt gccgtacctc ctttctcaac aacctgcttg ctcccggaag
      721 cgatatttgt tgtgtcagct ttcccgccgc tcttgatatt ttgcgtgcca ctgttgatat
      781 tggttcccgt agcaatacca tgattataaa tattctgtgt accgccatta attatggtat
      841 tagtcgcgtt cccggcaaca tccatggccc cgccgttatc tattcgggtc gcatcagctt
      901 tagcattcgt taaaactgac attgttcctt tatcgttaat tatcgtccct gtaaaaattc
      961 ctccctcact aattgtctgg ctgccaccgt taatgactgt attattagcc tgcccctgat
     1021 aagagccatg accagatacc tcttgatgtc caccagtatc aataatactt ccattagaaa
     1081 tcccgccata tacctcctga ttgccgtgat tgatgatatg agcgttattt gttgtacctc
     1141 gttcatctac tctttggctg ccgtctacag tctcatcatt tacaacgcca ataacattag
     1201 aagtgaaggc cgtcatccca ggcggggcgt atatcatggc agatatcaat aaggaaagta
     1261 ctgagcggtg aaaataatag cgactgattc tgttcataaa tttcatcctc tgaaaaatga
     1321 atactgagta gcgtctaagt gacctaagct ctgctgcaac atcagcccgc aggcaccaga
     1381 ccaggggatt catcctgaag agacagcgca ggtgtattgt gttcaccgct caccaaagac
     1441 atcatgatga aatgatgata tcccgcataa gaaagaggca ttttttacac gcagtgcgct
     1501 gaagtgtagt tggataaaaa atcactcttt tcagataata ctgtcgtacg cttatctttc
     1561 gacaatgagg ccgtcggcaa aataaaatga ctaatgtaat cgttgctgat gaatatcttc
     1621 tgctcacata aaaatcacac aataatattg ataaatcaga ttatcttacc tttacaacat
     1681 tgcgttaaca gtcaatgaca cttcttgaat aaaaatattg tcaatcaatg agttattcct
     1741 catttaagat tattctcatt cacgtaaaaa acataattcc tatcatcaca gccacgctca
     1801 ttttgaatta tctgaataat agcgagcgtt ctttagttaa gcagatctta attgaagacg
     1861 aaattattgt gtgtgcaact tacttaatac cggacatcta agttgaagaa aaaaatactt
     1921 gccttcgggc ttatcttagc attgttctgc tccacgccag cgatggcgga tatgaaccgc
     1981 accacgaaag gtgcattgct aggcgcaggc gttggtttac ttactggcaa tggtgttaat
     2041 ggcgtactga aaggtgcaac tgttggcgct ggtgttggtg cagtaacaga aaaaggccgc
     2101 gacggtaaaa atgcgcgtaa aggtgcaaaa gtgggtgccg ccgttggtgc tgtcactggc
     2161 attctgaccg gcaatggcct cgaaggggcg attaaaggtg ccatgattgg cggtacgggt
     2221 ggtgcaattc tgggtaaaat gaaataagga atgatgatga aaaaatttgc tttactggcg
     2281 ggcctgtttg ttttcgcacc aatgacctgg gcgcaggact acaatattaa aaacggtttg
     2341 ccgtcagaaa cctatattac ttgcgcagaa gccaacgaaa tggcaaaaac tgacagcgca
     2401 caggttgcag aaattgttgc ggtaatgggt aatgccagcg ttgccagccg tgatttagaa
     2461 attgagcaat ctccggaact gagcgccaaa gtggtagaaa aactgaatca ggtttgcgct
     2521 aaagacccgc aaatgctgtt gatcacggca attgatgaca ccatgcgtgc tatcggcaaa
     2581 aaataatatt taatatgtta ccgcgtcgat gaattcgacg cggtatttta gctaacgggg
     2641 atcagaactt atatttcagg cccaccatca ctgcggtgtc attgtagcca ttatcaccca
     2701 gctgcacgcc cacattaccc cagacgctgg ccgccggatt cagattgcca tttacgccaa
     2761 gtttaatttc ccccagatta cgcgccccgt cttgttcgac tttcacaccg ttcattgaga
     2821 cagcaaaatc tttactgtta tggatccagt tcatttcaac aaaaggttca aagtcgtcac
     2881 cgtgcggacc gctgtttttc tcctgagtac gaataaaggt gcggaaacca agtcgggtct
     2941 ggatgttgtt atttgcgtca ttctcaatac gtgagccatt ggcttcggta tgcgcattat
     3001 gatcgacgcc catccagata gcctgtgcct gtgcctgtgc ctgtgcctgt gcctgtgcct
     3061 gtgcctggag tatccacgtg tatttcgccg cttccagacc aaaggatcta ttcagggcaa
     3121 agccgtaacc cgcttccagc gagacggtta cgcctttcgc actataggat tcataggcta
     3181 attcatcccc ctttcaccga gtttttaaac cagctatatt gcgcccaggc gtcaatgtat
     3241 gcgccttttt tactgatgtc atcggcaaac caggtggcat acagccctgc gctatagcct
     3301 ctgacactcc ctttcgaacg ataatccgac acgctggaat gagttgagtt gtagtcgcgg
     3361 gcataaccag ccatcactcc caaacgccaa ctgtcactgt cggtaaaacc accggttaac
     3421 agatcggccc ctaactgcga gacgtagcga tgcgaggtcg ttctcaactg tccgttgctg
     3481 tcacgccagg cattatgccc gccaatttga cgtagccaaa gtcggcttga acgctcctgt
     3541 tcagttacag gatcgatata gcgcgtttca cctgcacgtt cgttcagacg cataacaaaa
     3601 agagtgttag cggctgccag gttggcgacg taacttccag cttcggggcg caggacgggg
     3661 gtaggcgcaa cagtagatgc tgaacttcct ccagagtttg tttcaccgcc gctcgttgcc
     3721 tggaagttag taagatacca gtttttattg gtcgcttcgg tattacctcg ggttaatgaa
     3781 tattcgtagg caccggcgaa aatcctcgaa tccttaacaa attccccatt tgattccccc
     3841 tcaacgctga taatctctat cccatttaac gtgtaagctc cgctgcctcc tgcattggta
     3901 actttaactc gggttgttcc agaggtattt ccattaataa cgactttatc cgtagctgaa
     3961 ttatcatcac ccaattcagt tctgagatgc aatacgccat tattaccaac gtaattttca
     4021 gttattgtta atcttgttgg ttcgaaatcc tttccatctg cccgggaaat atataccgta
     4081 ctattgtcaa ccctgaggtt gctcaccgtt gagtcagctt taatatccca ggtactatta
     4141 tctgaaagcg acagataggt atgagtgtta tcatctgttg aaagattggc ggaacccgtt
     4201 atttttgaat gagttgcatc gacggtcata tgacctttaa tattattgat aaaaacatct
     4261 gcagccgatg atacctcact atcagtaatg gtcacgttac tcgtctcatt tttattgtag
     4321 aggatttcat ttgctgaccg tagtgagcta ccagataaaa tatctaccgt tgcttcctga
     4381 ccatttatgg aagactccag cacaactcca gccccctgat gcgcgactgc agatgtattt
     4441 ttcagcgtca ccgtgccgcc attataaatt ttagcaatcg cggcgtcagg acccgttgta
     4501 taaatttctc cctggttaaa tgaaactgtc ccctggcgag cagcgatggc atgagcattg
     4561 tccccatgcg tggtgatatc aacatcggtt aatgtaacgc tggcattggt ataatcaagc
     4621 ttgccatcag ccttgacgac agtgccgtta gcgtaagcgg cataactttc tgttccgtgg
     4681 gttgttatct ccccttttgc catatccagt tttgctttgg cgctattttc attacttcct
     4741 gtatcggcag tactttcttc atcaagagaa gatacacacg cacgcgcgct tccgggagat
     4801 gcacacgcaa gaacgccgac tgcgtgatta cccgcagtaa cgataaaagt attacctccg
     4861 tcagaaaaag agggggtagc cgaaccgtca gggttgactc ttattatggt atcagtattc
     4921 aggtttccat caacttgact taacaaacca acagaataat ctcccgttgt gacaatcgta
     4981 ttattacccc gcaaagtgac agcaccgcca tattcactta cgactgcgct agctgtatat
     5041 gctttgctta gaggactatt gtcagaagga tataaaccgc ccgttgttac aatgacacca
     5101 ttgttaatgg ttaaattgct accctctcct gcaacagata caccgtaact tccattaccc
     5161 gttgttataa ctaacgcatt atcaatatcg tttacttctc catcttttat tgccacagca
     5221 tgtttatgtt cctcgtgctg aataaactga tcagcatatg cattacccac cgccagagca
     5281 ataagtccta aactaaatcc ggggagtttt ttcagtttca tagattaacc atccattcat
     5341 tggattaaca aacattcctg gtcaaataac ctatgagctc agattaccaa aacggagggt
     5401 aaagacaaaa acaaaagcac aagaaattta aatagataaa cagcgacaat atataaatga
     5461 taaataagtc ggcattatca tttttcacct tattttcatg acattgctca ctttgaagtg
     5521 acgattttgt ttaacaaata actcttcgac atcacaatca ttgatagttg caatagaaat
     5581 tatttcaatg atatataaaa acaactgtga taacaccagg gttgacaact atttgcgcaa
     5641 taattccttt ccttcaatga tccaggcatt cactgccagc aacccattca gccgcatact
     5701 gacagtgaga aactgaaaga ttattgctga tccctgtggc tgacgagtct ttcccttaat
     5761 cgattaacca gattgatcgc cagccaaaca agggcattaa gcaaatttat cgtcacaagc
     5821 acttctccca gcccggtact gggctttgca ataagaatga ccaggagggt gatcagcata
     5881 aatgcaatgg aaaagatgat atagagagtg aaataatcca gattattact attgttcatg
     5941 ctactaatgg caatcctgtc aaaactttca aacaattata gcaaacaaaa taatgaacaa
     6001 tagtaacaag aggcaacgag ctaattagct gtctataatt acaccgcacc atggccttat
     6061 tgatcaattt tcactcaacc acaaccttca ccttcggttt agaaaggata attttgacca
     6121 ggtcgatgta tgtaacaggt ttatagaaat aataaccctg ctgaaatgtg atattatttt
     6181 ggttcagata gtcaagttgt tctttcgttt cgacaccttc agcgacgata ctgatcgaaa
     6241 gtttacgcgc cagatccaat acacaatcca gaattcgggt tgattctggg tctgcgttga
     6301 cgcggccaac gaaactgtga tcaattttga tataatcaat atgcaggtca tgcagataag
     6361 aaagccctga gtagccagta ccgaaatcat ccagcgcgat gacaaaacca ttttcatgca
     6421 gaatgttcaa ccgctgaacc agactttcat caacatttaa tggctcacgc tcggtaactt
     6481 ccagaacgag gtttaaatcg cggcgggtaa aactgtcacg gaaatttaaa cactcgtcga
     6541 caaacgtcgg cgaaataata tgcgaagcgc taaaattaat tccaatatga aaaccttccg
     6601 gcagtttact cgcgatagcg ttcatctgtc tggcaacctg attcatcagg ctttgtgtaa
     6661 gcggaacgat taatccggat ttttcagcaa gtggaataaa tgccgcgggt gaaatatatc
     6721 caccgtgagg ttgtttccag cgggctaaca cctcaactcc ccgcaatgtc ccttcccgac
     6781 catttaccac aggttggtaa aaagggacga tctccccatt atttattgcc cgtcgcagga
     6841 tctcttcagg cgttgcgctt ttattgaaat atctatcaag taggaaggca gcggcgcagg
     6901 cgattaacag aataaatatt aaaatcccaa agcctttatc gataagtctg tagaagctaa
     6961 agagtggcgg cgggttaaag ataatagtga aatgatattt tgtggagtga accttctcgg
     7021 tatagggata atgtccatta agcgtcatca catcacccgt tggtccaata atgtcatccg
     7081 ccacgcgtaa tacatacctt acccctttca agggtacatt aagcgccccg cgaatatgtt
     7141 gatcacttat cgtaaccaaa atgcgcgtat ctgcaaattg gctctgatag agcaggatag
     7201 gtaatctatt aacggtgtcg attgccggag ccaacagtaa attactgtcc gggacaacag
     7261 gaatacgaga cagcaggacc cgattcccag gcagggatgt acaccagact attccctgtt
     7321 tgagaatgat gattgtgcgc aggtgaggtt tcagagctgc ttcagtgcca agctgatatt
     7381 gctcctcgag gtcgcattcc ttcccggcaa tgttaaccgc tgtttgagtc gcctgtgacg
     7441 cttcttcaag tatatgattg atattgttgg cggcatatct cgctcccgcc aggtactctg
     7501 cttttgcgga ataccagagc tggatgttta aaatagcgac accggttata aacaagcata
     7561 tcgcaacgag gatgggtatg agtgtattgc gcatttgctt gtcccggcca aagggtttaa
     7621 tacatgaaaa tgccattcat tcgctcgcgc tggcatctac agagatgcat ggtagagagc
     7681 ataggaaata tccacgccga agataaaatt ttctccatct tgatctaacc cattaattat
     7741 tgagcataat gtaggcagga ttaaataaat taggtggggt atcaggcatc aagaatggag
     7801 aacgagaact ctccattctt gacaactgat attacggaca tattaagaaa gcataacgtc
     7861 tgaaatgctc actttgcatc agcatggtga tacagctgat gtttatacta aaaccttact
     7921 caagttctaa gagagcatgg attccctgtc attaataatg atatccgtta gtgtagtctt
     7981 atgtatttca atgtactgta agatttgcag atagagatca gaaagaatca cactggtttc
     8041 atcttttaaa cgcaagcgta aagcctgatc aataatatga ctatcaacat acccatgcgt
     8101 catgaacacc tccctctcga gatttttaaa caaagcacat tgaaaaataa atctctctgg
     8161 gattgaattg ttcatgtcag cctcgtagaa atattaaccc aataaaatta tgctgtgtat
     8221 agtctaaagc gacagacaaa aataagatga atgagttttc tataaactta tacttaataa
     8281 ttagaagtta catatcatca gctgtgtatc gcaacacgat ttccagtgtt tttctaatca
     8341 catcagcttt gagaatatca cttgttgttt ccagggagtg tatcagactt aagataatat
     8401 ttttattatt aacattatcg cctgaaagca ttaaattggt gacagcctgc cctaacacaa
     8461 ctgactcttc ttctaacaaa ttacccgaac tgcgaaagta acttgctaac gctttatcag
     8521 ttattgcatt atgaattgta gtatcttcaa gcatggtaac ctctcatctt acttatgaaa
     8581 ttttaatgta ttctgtttat tttcttacca ttgaacatac ttttattgtc aactgtcgct
     8641 gttcttcggt ttggccctcc tgaatcacta ttgctaaaat catcaattat gctgtcaatt
     8701 aaatcgcgtc ggaaagcatc ttcctcagcc gatttcatta cgagtaattg cttaataaga
     8761 gtctgcaatg aaaaatttat cttcatgcgc agtatctgga gcaccgcctg gccagtaatt
     8821 tcatatttta tacgttcatt atcagatgtc ttcataacga cttcatagct aacctgttaa
     8881 ataatcaggc tgttgcatta ttcaaaaagc aacccaatta gtgcattata atgtttctgt
     8941 tcctcttccc cagtcgcttg ttccagtcgg caaagaagtt tggcacaaag cgactttcga
     9001 ctcagattac gtccatcttt caaaatctca gtcacaattt ccccgagagt ttcctgctga
     9061 gtaggcaagt tagcttttgc aaagtaacga gtgattgctc ccgcagaatc taaagtcact
     9121 gaattttgat gcatgctacg cctctgttaa aaatgttaat caatgttaag tgaagtaaca
     9181 atagcaaact tgtacgaaat atg
//
LOCUS       DAJVTL010000151         9001 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.153, whole genome shotgun sequence.
ACCESSION   DAJVTL010000151 DAJVTL010000000
VERSION     DAJVTL010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9001
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.153"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            94..855
                     /gene="pphC"
                     /locus_tag="OQQ26_003691"
     CDS             94..855
                     /gene="pphC"
                     /locus_tag="OQQ26_003691"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000119108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase PphC"
                     /protein_id="HCS1859005.1"
                     /translation="MSWRLVYASVVGTSHISADLPCQDACQMQVAWLNDQQPLLSVFV
                     ADGAGSVSQGGEGAMLAVNEAMAYMSQKVQHGEFGLNDVLATDIVLTVRQRLFAEAEA
                     KELAVRDFACTFLGLISSPNGTLIMQIGDGGVVVDFGHGLQLPLTPMVGEYANMTHFI
                     TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASATQE
                     QLDLLPELLKQFLSSPAVNERTDDDKTLALALWAV"
     gene            complement(920..1381)
                     /locus_tag="OQQ26_003692"
     CDS             complement(920..1381)
                     /locus_tag="OQQ26_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegJ family protein"
                     /protein_id="HCS1859006.1"
                     /translation="MKKILLMLSLLFFTTAGFSEVSDTLVTGGYDKQAMSDAIKHARK
                     ETDKFIEVMNKKDADTFAVKAPITDHGRTEHFWLTDVTYSNGMFIGVISNDPGIVTNV
                     EYGQEWKIKKEDISDWMYTRGDKIYGGYTIDPLLVTYPKEEADELRAKLVR"
     gene            1579..3525
                     /gene="yegI"
                     /locus_tag="OQQ26_003693"
     CDS             1579..3525
                     /gene="yegI"
                     /locus_tag="OQQ26_003693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YegI"
                     /protein_id="HCS1859007.1"
                     /translation="MKTNIKVFTSTGEMTTLGLELGKGGEGAVYDIEEFVDSVAKIYH
                     TPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMI
                     YSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLI
                     DSDSFQINANGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFG
                     GRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMF
                     QQAFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLTDCPWCTLDNQGV
                     IYFIDLGEEVITTGGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTRRPLPLGLLRRE
                     YIILIEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEIQQRREAFN
                     RAKMDYDHLVNQIQQLGGLGGFIAKRAMLEKMKDEILGLPEEEKRALAALHDTARERQ
                     KQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVID
                     WKASCERRFVFRPNEAVTPADRQAVMAKMTAKRHRLESTLTVGATELQRFRLHAPART
                     MPLMEPLRQAAEKLAQAQADLSRC"
     gene            complement(3538..4890)
                     /gene="yegD"
                     /locus_tag="OQQ26_003694"
     CDS             complement(3538..4890)
                     /gene="yegD"
                     /locus_tag="OQQ26_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCS1859008.1"
                     /translation="MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTRE
                     AVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF
                     QGLGGDEANAQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG
                     GTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLS
                     YRLVRSAEECKIALSSVAETRASLPFISDELATLISQQGLESALSQPLARILEQVQLA
                     LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            5024..5881
                     /gene="alkA"
                     /locus_tag="OQQ26_003695"
     CDS             5024..5881
                     /gene="alkA"
                     /locus_tag="OQQ26_003695"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HCS1859009.1"
                     /translation="MYTLNWQPPYDWSWMLGFLAARAVSGVEKVADSYYARSLAVGEY
                     RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGAGR
                     LGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQR
                     LAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRW
                     TANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG
                     WQPDGTDKL"
     gene            complement(5919..>9001)
                     /locus_tag="OQQ26_003696"
     CDS             complement(5919..>9001)
                     /locus_tag="OQQ26_003696"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1859010.1"
                     /translation="SILLFSTSSLNMTWSTINIVEAVVGAVLLRKLLPWYNPLQNLAD
                     WLRLAFGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHY
                     LLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIF
                     LTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHI
                     SESETRFRNAMEYSAIGMALVGTEGQWLQSNKALCQFLGYSQEELRGLTFQQLTWPED
                     LNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIED
                     INELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPN
                     WQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRIAVKDGIRHIRALANRVLNKEGE
                     VERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKM
                     SGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVH
                     YSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRIL
                     LQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLG
                     GDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAA
                     EVMSQADIACYASKNGGRGRVTIYEPQQAAAHSERAAMSLDEQWRMIKENQLMMMAHG
                     VASPRIPEARNLWLISLKLWSCEGEIIDEQKFRRSFSDPALSHALDRRVFHEFFQQAA
                     KAVASKGISIALPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESV
                     QKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCSNVQGNLMDEMLITIIQG
                     HAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGDVIADAQPLDLLVNSSYFAIN"
BASE COUNT         2138 a         2315 c         2333 g         2215 t
ORIGIN      
        1 gtttagctgg ttatccagtt cactgcgttc ggtttcccgc tccacgccgg gaacggaagt
       61 tgtgctggaa gcgccaaaag gctggacgtc agtgtgagct ggcgtctggt ttatgcatcc
      121 gttgttggaa cgtcgcacat tagcgctgat ttaccttgtc aggatgcctg ccagatgcag
      181 gttgcctggc taaatgacca gcagccatta ttgtcggtat ttgtcgctga tggcgcaggc
      241 agtgtctcgc agggtggcga aggcgcgatg ctcgccgtca atgaagcgat ggcttatatg
      301 tcgcaaaaag tgcagcacgg tgaatttgga ctcaatgatg tcctcgctac ggatattgtg
      361 ctgaccgttc gtcagcgact ttttgccgag gcggaagcca aagaattagc ggttcgcgat
      421 tttgcctgca catttctggg actgatttca tcgcctaacg gcaccttgat tatgcagatt
      481 ggcgatggcg gcgtggtggt ggattttggt cacggtctgc aattgccgct tacgccgatg
      541 gtgggtgaat atgccaatat gacgcacttc attaccgacg aagatgccgt ttccagactg
      601 gaaactttca ccagcactgg gcgtgcgcat aaagttgcag catttacgga tggtattcag
      661 cggctggcgt taaatatgct ggataattct cctcatgtgc ctttctttac cccgtttttc
      721 aatggactgg cgtcagcaac gcaggaacaa ctcgatttat tacctgaatt gttaaagcag
      781 tttttgtcca gcccggcggt aaacgagcgt accgatgatg ataaaacgct ggcactggcg
      841 ctgtgggcag tgtgagtttc tcatggcggt tgaagacaac aattcaaccg ccagtttaag
      901 caatcaatat aacggctgat tagcgaacta attttgctct tagctcgtcg gcttcttctt
      961 ttggataggt gaccaataaa ggatcaatgg tataaccgcc gtaaatttta tccccgcgcg
     1021 tatacatcca gtctgaaata tcttctttct tgattttcca ctcctggcca tattctacgt
     1081 ttgtaacaat accaggatca ttgctgatta cgccaataaa catgccgtta gaataagtga
     1141 catccgtaag ccagaaatgc tcggttcttc cgtgatcggt tatcggggct ttgactgcga
     1201 aagtatcggc atctttttta ttcataacct cgatgaattt atcggtttct ttccgcgcat
     1261 gtttaatcgc gtcagacatc gcttgtttat cataacctcc cgtcactaac gtatccgaaa
     1321 cttcactaaa gcccgcggta gtaaaaaata gcaggctcaa catgagtaat atctttttca
     1381 ttttttctcc agaatctctg tgtagtaaaa gttagcaaaa cctgtggaag tgaatcatta
     1441 tcaggttgga attgaattgt atcctgatga aattacattg tcatttttat tcttgagtgg
     1501 gctcttccca tatagaaata attataatgg gcagtgttat tattcattga aatataatat
     1561 tgctgccctt gaaacattat gaagacaaat ataaaagtat ttacatcaac aggtgaaatg
     1621 accactctcg gtcttgaact gggcaaaggt ggtgaaggcg cggtttatga tatcgaggag
     1681 tttgtcgata gcgtcgccaa gatttatcac acgccgccac ccgccttaaa acaggacaaa
     1741 cttgccttta tggctgcgac agctgacgcg caattgttga attatgtcgc ctggccgcag
     1801 gcaacgcttc acggtggacg aggcggaaaa gttatcggtt ttatgatgcc aaaagtttct
     1861 ggtaaagaac cgattcatat gatctatagc ccggcacatc gtcgccagag ttaccctcat
     1921 tgtgcgtggg attttctact ctatgttgcg cgcaatattg cttcatcttt tgctacggtt
     1981 cacgagcacg ggcacgtcgt gggtgacgta aaccagaaca gttttatggt aggtcgcgac
     2041 agcaaagtgg tactgattga tagcgactcc tttcagatta acgctaatgg cacgttgcat
     2101 ttatgcgaag ttggcgtgtc gcattttacg ccgccagagc tacaaaccct gtcgtcattt
     2161 gtcggctttg aacgcacaga aaatcacgat aattttggcc ttgcgttgct gatttttcac
     2221 gtcttgtttg gtgggcggca tccttattcc ggtgtgccgc ttatctctga tgcgggtaat
     2281 gcgctggaga cggatattac ccatttccgt tatgcctatg cgtcagataa tcagcgacgt
     2341 ggtttaaaac cgccgccacg atcgattccg ctatcgatgt taccgagtga tgttgaagcc
     2401 atgtttcagc aggcattcac ggaaagtggc gtggcaaccg ggcgtccgac ggctaaagcg
     2461 tgggtagcgg cacttgattc tctgcgccaa cagttaaaga aatgtcccgt ttcggcaatg
     2521 catgtttatc ccgctcattt gaccgactgc ccgtggtgta cgctggataa tcaaggcgtt
     2581 atctatttta ttgatctcgg cgaagaggtc attaccaccg gcggggattt tgtgctggca
     2641 aaagtctggg cgatggtgat ggcgtcagta gcaccgccag cattgcaatt gccattaccc
     2701 gatcatttcc aaccgactcg caggccgctt cctttaggcc tgttacggcg cgaatacatc
     2761 attctgattg agatcgcact gtcagcgtta tcgctgttgc tttgcggcct tcaggcagaa
     2821 ccgcgttata ttattttggt tcctgtgctg gcggctatct ggattattgg cagtctgaca
     2881 agcaaagctt ataaagcaga aatccagcaa cgccgtgagg catttaatcg cgcgaaaatg
     2941 gactatgacc atttagtcaa ccagatccaa cagttgggcg ggctgggagg ttttatcgcc
     3001 aaacgggcga tgctcgaaaa aatgaaagac gaaattctcg ggttaccgga agaagagaaa
     3061 cgcgctctgg cagcacttca cgacaccgca agggaacggc agaagcagaa gtttctggag
     3121 ggatttttta ttgatgttgc ctctattccc ggcgttggcc ctgcgcgtaa agcggcgtta
     3181 cggtcctttg gtattgaaac agcggcagat gttacccgtc gtggtgttaa gcaagtgaaa
     3241 gggtttggcg accatctgac ccaggcagtt atcgactgga aagcaagttg cgaacgccgt
     3301 tttgtgttca ggccgaacga agcggtaacg ccagcagaca gacaagcggt aatggcgaaa
     3361 atgaccgcca aacgacatcg gctggaatcg acgttgactg tcggcgcgac agagttgcag
     3421 cgatttcgcc ttcatgctcc agcacggacc atgccgttga tggaaccttt acgtcaggcg
     3481 gcagaaaaac tggctcaggc gcaggcagat ttaagccgct gctgagccat ttttcaatta
     3541 acgaaacacc acttccgccc agcgtgccag cccggcggtg acggagccaa agtcatcgcc
     3601 gcctgcaatc ggaattcccg gcaactgttc tgccagcgct tttttaatca gcggcgaacg
     3661 ggcgctaccg ccggtcaggt agataacgtc cggtttttcc tgggcgttat ccagcgccag
     3721 ttgcacctgt tccagaatcc gcgccagtgg ctggctgagg gcgctttcca gcccttgctg
     3781 gctaatcagc gtagccagtt catcgctgat aaacggcagt gaggcgcggg tttccgctac
     3841 gcttgaaaga gcaattttgc actcttctgc actacgcacc aggcgatagc ttaaacgctg
     3901 acgccagact ttctgtaaca gggccacttt ttccggttcg cgggcatcgc gtaccagatc
     3961 gttaagcaga cgaccgttgg cactactgta gaaatcactc tgtgcaggta cgtcgttgat
     4021 ggcaaccgca ttccaccacg gcagaatcgg cagggcgatg cctttttcgg tttcgccacc
     4081 catgcccagt aacggcatca ggtttttaaa cgccagtgcg atgtccagat cgttaccgcc
     4141 aatacggcaa ccactgtgac ccagcaggct ggcttcacga tcgagacgcg aacgccactg
     4201 cggccccatc agcagcaatg aacagtcagt cgtaccaccg ccgatatcca ccaccagcac
     4261 ccgtttttct tcctgcaagg tggcttcgta atccagccca gccgcgaccg gctcgtactg
     4321 gaataccacg tccctgaatc cggcacgctt cgccgcgcgt tccagaatcc cttgcgcctg
     4381 ggcgtttgct tcatcgccgc ccagcccctg gaagttgatc gggcgaccaa tcaccgcctg
     4441 agtaatcgct tctggcagct gcgcctgcgc ctgctggcga atgtgcaaca tcattgcgca
     4501 gaccagatcc tcaaacagcg ctacctgctg cggttttaat ccgctggcac cgaggaacga
     4561 ttttggtgat ttcacaaacc acacttcttc tggatcatca atgtactgtg ccagtgagga
     4621 aagaccgaac tgcacgcttt tcgccgtaac atcgatatct tcttcgcggt tataacgaat
     4681 cgcccgacgc aacagcgcct gcgtttcatc gtcgtctgcc ggaacatcat gatggcggta
     4741 cagccattcg cttaccgctt cacgcgttgg cgcgcaaagc attgaaggca gcagcgtgct
     4801 gtcgttttcc atttttagca agtgcggttt accgtcacgc atgaccgcca ctgaacagtt
     4861 tgctgtaccg taatcaaaac caataaacac gaaataatcc ccatgccggt gaagaagggg
     4921 cgtgacttta gcgaaatgtt gccgtcgcga caaccggaat atgaaagcaa agcgcagcgt
     4981 ctgaataacg tttatgctga aagcggatga ataaggagat gcgatgtata ctctgaactg
     5041 gcagccgccg tatgactggt cgtggatgtt gggatttctc gccgcccgtg cggtgagcgg
     5101 tgtggaaaag gtcgcggaca gttattatgc ccgtagtctg gcggtgggcg aatatcgcgg
     5161 cgtggtgact gctattccgg atatagcccg ccatactctg cacataaatt taagtgcagg
     5221 tttagaaccc gttgccgctg agtgtctggc gaaaatgagc cgcctgcttg atctgcaatg
     5281 taacccgcag attgttaacg gtgcgttggg caagttaggc gcggggcggc tcggattgcg
     5341 tttacccggc tgtgttgatg cttttgagca gggcgtgcgg gcgattttag gccaactggt
     5401 gagtgtggcg atggcggcaa aattgactgc caaagtggta cagctttatg gcgaacggct
     5461 ggatgatttt ccggagtata tctgcttccc cacgcctcag cggctggcag cagccgaccc
     5521 gcaggcatta aaagcgttag gtatgccgtt gaaacgggca gaggcgctga ttcatctggc
     5581 aaatgcggcg ctggagggca ccttaccaat gacaataccg ggcgatgtgg agcaggcgat
     5641 gaaaacgctg caaacttttc cgggtatcgg gcgctggacg gcgaattatt tcgccttgcg
     5701 tggctggcag gcgaaagatg ttttcctgcc ggatgattat ctgattaaac agcgatttcc
     5761 gggaatgaca ccggcacaaa tccgccgtta tgccgagcgc tggaagccct ggcgttctta
     5821 tgcgctgttg catatctggt atacggaagg ctggcaacca gacggaacgg acaaattgta
     5881 ggcctgatac gtcgtatcag gcgatgggga agcacgcctc agttaatcgc gaaataactg
     5941 ctattcacca gcaaatccag cggctgggca tcggcaatca catcaccata aatcagatcg
     6001 acaccgatgc cagaaagcgt atccatcact aagggtaaaa cgactggccc ggcgatggtt
     6061 ttcatcccga gtcgctgagc gtgcccctga ataatcgtta tcagcatctc atccatcaaa
     6121 ttaccctgca cgttggagca taactcacca tcaagtagca ggtaatctgc catattcgct
     6181 ttcagcgagt tgaagatttg cagatcgcgg cccacctgac tgagcactat ccgacatccc
     6241 gccagccgca gtttttgcac gctttctgcg tgatctaaaa tcgcttcagc cggaataatc
     6301 agatgtaata accgtggtgg tagagggcta ttttccagct gctcaagcag atcattcacc
     6361 agcgtggcgc tactcaaacc ggcaacggaa agggggaggg cgatgcttat gcctttactg
     6421 gcaaccgctt ttgcggcctg ctggaaaaat tcgtggaata cccgtcggtc aagagcatgg
     6481 ctaagtgccg gatcgctgaa gctacgacga aatttttgtt catcaataat ctcgccttcg
     6541 caactccaga gcttaagtga aatcagccac aaattacgcg cttccgggat ccgtggcgaa
     6601 gcgacaccgt gggccatcat catcaactga ttctctttaa tcatccgcca ctgttcatca
     6661 agcgacatcg ccgcccgttc gctatgtgcg gcagcttgct gcggttcgta aatcgtcacc
     6721 cggccacgtc caccattttt ggaggcataa caggcgatat cagcctgcga catcacttct
     6781 gccgcctgat gattgttgtc atcaatcaag gtaatcccgg cactggcacc tacccgatgt
     6841 acacgtcctt cccagataaa gtgatagtca ttcacagcac tgataatacg tgtagcgata
     6901 aaacgcgcac tttcgacatt acagtctggc agcagcagac caaattcatc accgccgagc
     6961 cgcgccagca cgtcgctgga gcgcagcata ctcagcatca acgacgccag ttcgcgcagc
     7021 aaagcgtcgc cagcggcgtg cccggcgctg tcattcaccg ctttaaagcg atcaagatcg
     7081 ataaacacca gggcatgtcg ctgatgtgta ctgtttaccg tttgcagcag gatacgcagt
     7141 tgcttctcaa aactggcgcg attggcgaga tgcgttagtg catcatggga ggcgctgtag
     7201 ctcagctggc gcagcatttt gcgtgattcg gtgacgtcct gaatcaccag aaccgagcct
     7261 atattgctgc cgtccagagt acttaacggc gtaatactgt aatgcacgtc gtagctgccg
     7321 ccgctccggc agtgcaacac cacatcttgt tcaatcgcgg aacgtgaggt gtcagcactg
     7381 taaatgttct ccattaatgg tccgttgtcg ccaaaagtaa tatgcaacac cgtcaggagc
     7441 ggaacaccta acgcttcttc ctgcgtccag ccgctcatct tctccgccac cggattcata
     7501 aaggtaattt tcatcgccat atcaatacag accacggctt cgccaatgga gtccagcgta
     7561 atgtgcaggc gctctttttc ctgaaacaat gcctcgttaa gctgtttaac ctccgtcata
     7621 tccatattaa tgccgagcag gcgttcgact tcgccttctt tattcagtac ccggttggcg
     7681 agggcgcgga tatggcggat gccatctttt acggcaatgc gaaattccag cttaaagggc
     7741 gagcgtgatt gcaacgaatc acgaatcact ttttcggcat gctggcgatc ttccggcagc
     7801 acgcactcgt accacacctg ccagttcggt ttgatatgtg gaggaatttc atacagctcg
     7861 aacatccgct tatcccagct aaaaatattc ggcttcaact cccactccca gatgccaatc
     7921 ccgcccgctt cgttagccag agtgatgcgc tccatcagtt gctgattgac ctgttcggtg
     7981 cgttttagct cgttaatgtc ttcaatctga gcgataaaat agagcggcgt gccatccgtg
     8041 tggcgcacca gtgagacggc aagcaacgcc cagacaacat cgccattacg gttgtagtag
     8101 cgtttttcca ttgaataggt gtttatttca ccgcttatca gcttttcaac ctgttggaga
     8161 tctttattga gatcctccgg ccaggtcagt tgctggaagg tgagtccgcg cagctcttcc
     8221 tgactgtaac cgagaaactg gcagagtgct ttgttggatt gcagccattg tccctcggtg
     8281 cccactaatg ccatgccgat ggcggaatat tccatggcgt tccgaaaacg ggtttcgctt
     8341 tcggaaatgt gtttgcgttc cgcacgaaag gcatacatca ccatcgtcat gatgttggcg
     8401 ggcagcagga tcagcaaaaa cggtagccac ggcatatggc tcatcaggta tgtacgcggc
     8461 gtagcaagca gggagggatc cgcggccatc atcagcgaca ccatcatcac cgtggtaagg
     8521 aagatcaaaa aggcttccat tcgtggcagg cgcacggcgc tccacatcaa cagcacaata
     8581 atgaaagtaa aaggccacgg cagatacagc atcgaaagcc agcttaacgt cagtgtgatg
     8641 gctaacgtga gcagcgactc aaaaagcaac cgtgggttgc gatggcgcag cagatagtgt
     8701 ggtttaaata acaatcccag cggcaccagt gccagagcgc cgatggattc tgacagtacc
     8761 catatcaaaa atgccctgag aggatcgtct ccgggcgtca gcaggacaac cagaacaccc
     8821 cctaacagag gcggaacaat ggcgctgccg aatgccagac gtagccagtc agccagattt
     8881 tgcaaggggt tataccacgg cagcaattta cgtagcagca ctgccccgac cacggcttca
     8941 acaatattga tggtcgacca ggtcatgttc agcgagctgg tggaaaaaag caggatggat
     9001 g
//
LOCUS       DAJVTL010000152         8993 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.154, whole genome shotgun sequence.
ACCESSION   DAJVTL010000152 DAJVTL010000000
VERSION     DAJVTL010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8993
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.154"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            68..687
                     /locus_tag="OQQ26_003697"
                     /pseudo
     CDS             68..687
                     /locus_tag="OQQ26_003697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001413617.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(869..1624)
                     /gene="mlaA"
                     /locus_tag="OQQ26_003698"
     CDS             complement(869..1624)
                     /gene="mlaA"
                     /locus_tag="OQQ26_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HCS1859011.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
                     NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFIR
                     FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
                     DGGDMADGLYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
     gene            1918..2850
                     /locus_tag="OQQ26_003699"
     CDS             1918..2850
                     /locus_tag="OQQ26_003699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HCS1859012.1"
                     /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI
                     RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGF
                     IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILRTGIAAWAFEY
                     MPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL
                     MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS
                     HAQIRNDMSNKRKAEARQKAERAENIKKNNKNPA"
     gene            2926..3000
                     /locus_tag="OQQ26_003700"
     tRNA            2926..3000
                     /locus_tag="OQQ26_003700"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2959..2961,aa:Arg,seq:cct)
     gene            3162..4319
                     /gene="intS"
                     /locus_tag="OQQ26_003701"
     CDS             3162..4319
                     /gene="intS"
                     /locus_tag="OQQ26_003701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage integrase IntS"
                     /protein_id="HCS1859013.1"
                     /translation="MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIG
                     GKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYE
                     HKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKA
                     RRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGS
                     IVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVE
                     LLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIM
                     NEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWIDEKVE"
     gene            4453..4815
                     /locus_tag="OQQ26_003702"
     CDS             4453..4815
                     /locus_tag="OQQ26_003702"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bactoprenol glucosyl transferase"
                     /protein_id="HCS1859014.1"
                     /translation="MLKLFAKYTSIGVLNTLIHWVVFGVCIYAAHTNQAMANFAGFIV
                     AVSFSFFANAKFTFKASTTTMRYLLYVGFMGTLSVVVGWAADRCSLPPIVTLVTFSAI
                     SLVCGFVYSKFIVFRDAK"
     gene            4815..5735
                     /locus_tag="OQQ26_003703"
     CDS             4815..5735
                     /locus_tag="OQQ26_003703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000703667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCS1859015.1"
                     /translation="MKISLVVPVFNKEEAIPIFYKTVREFEELKPYEVEIVFINDGSK
                     DATESIINTLAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVI
                     PHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPQIEENVGDFRLMS
                     REVVENIKLLPERNLFMRGVLSWVGGRTDVVEYARAERVAGKTKFNGWKLWNLALEGI
                     TSFSTFPLRVWTYIGLGVSIFAFIYAAWMVVDKLIWGNPVPGYPSIMTAILFLGGVQL
                     IGIGVLGEYIGRIYVEVKNRPKYILKKGPK"
     gene            5732..7372
                     /locus_tag="OQQ26_003704"
     CDS             5732..7372
                     /locus_tag="OQQ26_003704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000984469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859016.1"
                     /translation="MMRFINITTILSLLIMYVLTSVISLHTPMHSDDYTYAITGIGIE
                     SHFKHYFTWSGRIVADYVSGLLLSINHTYRSLINAAALPILSLLIAKISSYLFEQKRY
                     QTALIGIFVYLTYWLSNTNLGQTTFWVVGSANYIWTNIFICLFFMLICRKVYAEDKKT
                     NTIIICIVGVFAGCSNENTGFVAVLFPLYLALCNYINNKRITKELIFYTISSGIGYLL
                     LVGSPGNKERAKYFTYWYDTPFIERLKEHLYHRVPDMISQLWISLLIITILLVIYAFN
                     KRPENKCISIVHAVFFMVCALISVIIMVASPTYPPRAGNGTLVFLLIAISLLLNAITQ
                     TKNGKILSVSLLIVLTLYFVPSYMDMKKTYAMASMQDEVRQKIIQENLKKGAKEFAIP
                     DFYFGKMLTPSQKFDTFHSDVGYGKFYGVHKNYKAKSNFDYSIVNFAKYYNIQKQLIP
                     AKVYLIGLYMDPTTGSIILKTDRSITAYNYIHGPKISIDVYYKNKTSPIKYEYWPEST
                     ILSYYSWTSFSVTPGEIERVVISPRDEKKELTHISLLL"
     gene            7443..8516
                     /locus_tag="OQQ26_003705"
     CDS             7443..8516
                     /locus_tag="OQQ26_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000824918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HCS1859017.1"
                     /translation="MKRLELTDYARFFAAMMVVLFHYTFNGIANGKISSIPMDNDIAN
                     ITKYGYLGVELFFMISGYVIFYSAKMRTASQFAFSRVLRLFPSYWFAVIFTSVFIYFL
                     GNEKITTDIKTTLINLTMLQSFLGAKDVDGVYWTLIFELKFYFVIFVFLLLGLQSKLD
                     LLIKTWALMIFTINISNLGNYPLLSGYFSYFIAGALLSIARDTKSIITYTLLLMMFYC
                     SITFSINHANIVNLKENIDYNTTVTGVLISLFFLFFLFQNTKYAQNLSLPLSTILGAI
                     VYPLYLLHAHIGYMLLDKFANGSNRTLLTVIIIFFAITIAYLTHVIIEKKCSPTWKYL
                     FGLFVAKPIEGIEKRLYKKTEES"
     gene            complement(8551..>8993)
                     /locus_tag="OQQ26_003706"
     CDS             complement(8551..>8993)
                     /locus_tag="OQQ26_003706"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859018.1"
                     /translation="CVDINICSTTTITGIPRAYKSFRLNVVKGSINTTANGYIEVYGD
                     LNIYSGTISGSSESLIRHVFGRLNVEITGNAIVNTPSIVKTTTSHPISISQTGGDTTK
                     ILKYVDGPGVSPVTIVVKTVNRNKAIDSVPVSQHQVIIGARISD"
BASE COUNT         2688 a         1809 c         1905 g         2591 t
ORIGIN      
        1 cccattcccc ggaggcaaac atggactggc aaaagtgtag cggtattaag cgcagctatt
       61 tagttttatc ttcgataaga tatcacacaa actcagacat acggtaacgg aacttgatga
      121 gagcgggaaa agcgaaccaa cggacttatt tacctggtac ggtaaagata aaaaaggcga
      181 ctctctcgct attgtaatta aaaataaaaa cggaaatgat tacttatctc tcggttacta
      241 cgatcaggac gactaccaca ttcaaagagg aattcgtatt aatggctcac ccaatattgt
      301 agtgaaaaag ccaggaatgc ttcagcgtgg tttgaaagca gtaaagctat catggcagaa
      361 tcatttgcaa caggttccga tcatcaggtt gtaaacgagc tcaacgggga aagactgaga
      421 gaacctaacg aagtttttaa acgtttaggt cgagcaataa gatataattt tcaagtggac
      481 gatgcaaaat ttagacgcga taatgtaaaa gaaataatct ctactttatt cgctaacaaa
      541 gttgacgttg accatcctga aaacaaatac aaagacttta aggatctcga agataaagtt
      601 gaaaaaagac ttcaaaatcg ccaggcgaaa tatcaaaatg aaattaatca actatctgcg
      661 ctaggtgtta attttgatga tatttaaaat tatttttcca gttttttgat ttttcaacgt
      721 ctgaatatcg gaaatagtca gtgacgaaca tcagtatttt tacatcatta catccgggtc
      781 attgtcggtt tatctccttt tacttgtggt aattgaggga taacaacaaa aaaggtgagt
      841 tttgcgactc acctttttta tttgtttctt attcagaatc aatatctttt aaatcatcct
      901 gaatcgcttg tgcgttcgga ttttcctgcg gtttgagttc gccgccatta gcgatgaaat
      961 catgacgctg gaagtacgct tcgcgcacca taatataagg gtcggacgac tgacgcagca
     1021 gaccgtcgga atccagcagc tgtgcgcggg tttcaatccc ttcaagcgtc catttaccca
     1081 cagacatcgg ccaggtcagc caggaaagaa ccgggtaaag accatccgcc atatcaccac
     1141 cgtcatcacg cagcgtgaag ctaccgtaga acggtaactg aacgtaaggc ccataaccca
     1201 cgccataatg accaagcgta ctaccgaagc ggtgaggttc agtccgttgc agtttcgggt
     1261 tcgccatccc tgcaacatca ataaagccgc ccatccccaa aatggtgttc aggaaaaagc
     1321 ggataaagtg gaccatcccc tgataagggt cgccctgcaa gaagtagtta accatcaccg
     1381 caggttcttc aaggttgcca gtaaagttgc tcaaaccatt acgcgccggt tgcggaacat
     1441 aatcacgcca ggcgacagcg accggtcgaa caatatacgg gtctaatacg ttgaagttga
     1501 agttgtacat ggtgcggttg aacccttcta acgggtcaga acgcccttgc tgatctgtac
     1561 cggaactcgc acaccccacc agaagcgtag ttcccagagc aagcgccgac aggcgaagct
     1621 tcataaatgt ctccctgttt ttttatggct tatgcagttt gccatccatg acggaacgat
     1681 accgtatccg cctgtttagg tgtgggcgat tgtaacagca cgtcaactga tgtccagacg
     1741 ccctgatttg ctgatttgat catagcctgg taatcgccgc cctgtaggct acttgattct
     1801 atagaaacag aaaaaggcaa acgcagcctt ttctacattt tcagagtaac tcccgccagt
     1861 tgcgagcaaa aaagccgcta cgctttagct atacgtgcta attcaagaga agagaccatg
     1921 gacaacgaca aaattgatca acacagcgac gaaattgaag ttgagagcga agaaaaagag
     1981 cgcggcaaaa aaatagaaat agatgaagac cgactcccct cccgggcgat ggcaattcat
     2041 gagcatatcc gccaggatgg tgaaaaagag ctggaacgcg acgcaatggc gctactgtgg
     2101 tcagccattg cggcgggtct gtcgatgggc gcttcgttac tggcaaaagg gatatttcat
     2161 gtcgaactgg aaggtgtgcc gggcagcttc ttgctggaga atctcggtta tacctttggt
     2221 tttattatcg tcataatggc ccgccagcaa ttatttaccg aaaacaccgt gactgcggta
     2281 ctacccgtca tgcaaaaacc gacaatgagc aacgttggct tacttatgcg gttatgggga
     2341 gtcgtgctgc tgggtaatat tctcaggact ggtattgctg cgtgggcatt tgaatatatg
     2401 cctatcttca atgaagaaac tcgcgatgca tttgtcaaaa tcggcatgga tgtgatgaag
     2461 aacaccccca gcgagatgtt tgccaacgcg atcatttccg gctggctgat cgccactatg
     2521 gtatggatgt ttcctgcagc gggtgcggca aagattgtgg tgattatatt gatgacctgg
     2581 cttattgccc taggtgacac cacccacatc gttgtcggtt ctgttgaaat cctctatctg
     2641 gtgtttaacg gcacgctgca ctggagcgat ttcatctggc ccttcgcact acctacttta
     2701 gcggggaaca tctgcggcgg cacctttatc ttcgcgttaa tgagtcatgc acagattcgt
     2761 aacgacatga gcaacaagcg caaagccgaa gcacgccaga aagcagaacg tgcggaaaac
     2821 attaagaaaa ataataaaaa cccggcataa atggcgaggg tttaagcaat cgagcggcag
     2881 tgtacttacc tcgcagtcca ttagcgggta tactcatgcc gcattgtcct cttagttaaa
     2941 tggatataac gagcccctcc taagggctaa ttgcaggttc gattcctgca ggggacacca
     3001 tttatcagtt cgctccaatc cgtaccagtc cgcaaaatcc cctgaatatc aagccttccg
     3061 tagattcaca gttcgtaatg gttcgcgtca gatcgttgac agccgcactc catgacgggt
     3121 aaaaagtgga taaaataatt ttacccaccg gatttttacc catgctcact gttaagcaga
     3181 ttgaagcagc aaagccgaaa gaaaaaccat accgccttct cgatggtaat ggcctgtacc
     3241 tttatgtccc tgtgtcaggg aaaaaggtat ggcagcttcg ctacaagatt ggcggtaagg
     3301 agaaaatcct gaccgtcgga aaatatccgc ttatgacttt gcaggaggca agggataaag
     3361 catggactgc gaggaaagac atctcggttg gcatcgatcc ggtaaaagcg aaaaaggctt
     3421 cgtctaacaa caattccttt agtgcaattt acaaggaatg gtacgaacac aagaagcaag
     3481 tctggtcagt agggtatgcg actgaacttg caaaaatgtt tgatgacgac attttaccca
     3541 tcatcggcgg tcttgaaatt caggatattg agccgatgca actgctggaa gtaatccgca
     3601 gatttgaaga tcgcggtgca atggagcgag ccaacaaggc ccgcagaaga tgcggcgagg
     3661 ttttccgtta cgctattgtc actggtaggg ctaaatataa cccggcacct gaccttgcag
     3721 acgccatgaa aggataccgc aagaagaact tcccgtttct tccagcagac cagatccctg
     3781 cattcaacaa agcactggca acattttcag gaagcatcgt atcgctcatt gcgaccaaag
     3841 ttttacgcta cacagcccta agaacgaaag agcttcgttc tatgctatgg aagaacgtcg
     3901 attttgaaaa caggattatc accatcgacg ccagtgtgat gaagggacgc aagattcatg
     3961 ttgtcccgat gtcggaccag gtggttgaac ttctcactac gctaagctca atcaccaaac
     4021 cagtatcaga gtttgttttt gccgggcgca acgataagaa gaagccaatc tgcgagaacg
     4081 cggtattgct tgtgatcaaa caaatcggct atgagggtct ggaaagcggt cacggattca
     4141 ggcatgaatt cagcacgatt atgaacgagc acgaatggcc cgctgatgct attgaagtgc
     4201 aactggcaca tgccaacggc ggttctgtgc gtggaattta caaccatgcg cagtatctcg
     4261 ataagcgcag agaaatgatg cagtggtggg cggattggat tgatgaaaag gtagagtgat
     4321 cgaccttaac cactatcgaa tgtcacaaag ccttgtgtat ctcagttttg tctcatcaac
     4381 cacagcaagt catcgatcga ttgaggcttg gatgatagac ttcatgcctt tcagaactca
     4441 ttgattaaat aaatgttaaa gctatttgca aagtacacct ctattggtgt actgaacacc
     4501 cttatacact gggtggtttt tggtgtttgt atctatgccg cgcatacaaa ccaagctatg
     4561 gcgaacttcg caggtttcat agtagctgta agctttagct tcttcgcgaa tgcaaaattc
     4621 acattcaaag catcgactac aacgatgcgt tacttgttat acgtgggatt catgggaacc
     4681 ttgagtgttg tcgtcgggtg ggctgctgat agatgttcac ttcctccaat tgtcactctt
     4741 gtcaccttct ccgccatcag cctggtgtgc ggtttcgtct attcaaagtt cattgtcttt
     4801 agggatgcga aataatgaag atatctctgg tcgttcctgt cttcaataaa gaagaagcga
     4861 taccaatttt ttataaaacg gtacgtgaat tcgaagagtt gaagccatat gaagtggaaa
     4921 ttgttttcat aaatgatgga agcaaagacg ctacggagtc aataattaac actttggctg
     4981 tttctgatcc gctagttgtt ccgctgtcat ttacacgcaa ctttggtaaa gaaccagcat
     5041 tgtttgcagg gttagaccat gccaccggag atgctgtaat tccaattgat gttgacctgc
     5101 aagatccgat tgaggttatt cctcatctta ttgaaaagtg gcaggcaggt gctgatatgg
     5161 tactggctaa gcgctctgac cgttctacag atggaagact gaagcgcaag actgctgagt
     5221 ggttctataa acttcacaac aaaataagca atccgcagat tgaagagaac gttggcgact
     5281 tccgacttat gtctcgtgaa gtggtagaga atattaagct gttgccagaa cgtaatcttt
     5341 tcatgagggg cgtgctaagt tgggttggcg ggagaactga tgtggtcgag tacgctcgcg
     5401 cagagcgcgt ggcaggcaaa actaaattca atggctggaa gctttggaat ctggcattag
     5461 aaggcatcac aagtttctca actttccctc tacgggtatg gacatacata ggtcttggcg
     5521 tgtctatatt tgcatttatt tatgcggcgt ggatggttgt agataaattg atctggggaa
     5581 atcctgtgcc tggataccca tcaattatga cagcaatcct tttccttgga ggtgttcagc
     5641 taattggaat aggcgtactc ggtgaatata ttggtagaat ttatgttgag gttaagaata
     5701 gaccaaaata catcctaaag aagggaccta aatgatgcga tttattaaca taacaactat
     5761 actttcttta ttaataatgt acgtattgac atctgtaata tcattgcata cccctatgca
     5821 ttcagatgac tacacgtatg caattactgg cattggaatc gagtcacatt ttaagcacta
     5881 ttttacatgg agtggacgca tagtagcaga ttatgtgagt ggtctgttac tgagtattaa
     5941 tcacacctac cgctcactga ttaacgccgc ggcacttcca atattgtctt tgttgatcgc
     6001 taaaatttcc tcttatttat tcgagcaaaa gagataccaa acagccttga ttggtatttt
     6061 tgtttactta acatactggc tatcaaatac caatcttggg caaacaacat tttgggttgt
     6121 tggctcggcc aattatatct ggactaatat tttcatctgc cttttcttta tgcttatatg
     6181 caggaaggtt tacgctgagg acaaaaaaac aaatacaata attatctgta ttgtaggtgt
     6241 ttttgcagga tgttctaatg aaaatacggg atttgtagcg gtactttttc ctctatacct
     6301 tgcattatgt aattatataa ataataaacg tataacaaag gaacttattt tttataccat
     6361 atcttctggc ataggttatt tattgctagt aggctctcct gggaacaaag aaagagcaaa
     6421 atatttcact tactggtacg acacgccatt cattgaaagg ctgaaggagc atctttatca
     6481 tagagttccc gatatgattt ctcaattatg gatatcgtta ttaattatta ccattctact
     6541 ggttatttac gcttttaata aaagacccga gaataaatgt attagcattg tgcatgctgt
     6601 attttttatg gtttgcgccc tcatcagtgt aattattatg gtagcgtcgc caacctatcc
     6661 gccacgtgct ggcaatggaa cattagtatt cttgctgatt gctatatcat tattactgaa
     6721 tgccattacc caaacaaaaa atggaaagat actgtcagta agtttactga tagtcctcac
     6781 tttgtatttt gtaccttcat atatggatat gaaaaagaca tacgcaatgg catcgatgca
     6841 ggatgaggta aggcagaaaa taattcagga aaacttaaaa aaaggtgcta aagaatttgc
     6901 cattcctgac ttttactttg ggaaaatgct caccccaagc cagaaatttg atacattcca
     6961 ttcagatgta ggctatggta agttttatgg tgtacataaa aattataagg ctaaatcaaa
     7021 ctttgattac tccatagtta attttgctaa atactataat attcaaaaac aactcatacc
     7081 tgctaaagtt tatcttatcg ggctctatat ggatcccaca acaggttcca taatattgaa
     7141 aactgatcgt tctattactg cttacaatta tattcacgga cctaaaatat ctattgatgt
     7201 atattataaa aataaaacat caccaattaa gtatgagtac tggcctgagt caaccatatt
     7261 atcatactat agctggacaa gtttttccgt tactccaggg gagatagaaa gagttgttat
     7321 aagcccaaga gatgaaaaaa aagaattaac ccacatttca ttattattgt aactttattt
     7381 agtataatgg gtgcgttcta tcgcgccctt gtttaaatca aacaccggag taactaatag
     7441 ctatgaaaag attagaactc actgactatg caagattttt tgcagcaatg atggtggtat
     7501 tgtttcatta cactttcaat gggatagcaa atggtaaaat tagctccata ccaatggaca
     7561 atgacatagc aaatattact aaatatggtt atttgggggt tgagttgttc ttcatgataa
     7621 gtggctatgt aatattttac tcagcaaaaa tgagaactgc atcccaattt gcattttcca
     7681 gagtattacg tttattccca tcttattggt ttgcggtaat attcacatca gtgtttattt
     7741 attttttagg gaatgaaaag ataacaacag acataaagac aacattaatt aacctaacaa
     7801 tgctgcaatc atttttaggg gctaaggatg ttgatggtgt gtattggacg ctaatatttg
     7861 agcttaagtt ttattttgtc atattcgtat ttcttcttct cggacttcaa agtaaacttg
     7921 atctattaat aaaaacatgg gcgttaatga tatttactat taacattagt aaccttggaa
     7981 actacccttt acttagtggt tatttctcat acttcattgc tggtgcgctt ctgtccatag
     8041 ctagggatac aaaaagtatt ataacataca ccttgttgtt aatgatgttt tattgtagca
     8101 ttactttttc tattaatcat gcgaacattg tcaacttaaa agaaaacatc gattataaca
     8161 caaccgttac tggggtactt attagtctat tctttttgtt tttcttattt caaaacacta
     8221 aatatgcaca aaatctaagc ctccctttat caacgatttt aggagccatt gtttacccat
     8281 tgtatctttt gcatgcgcat atagggtaca tgttactcga taagttcgct aatgggtcaa
     8341 atagaacatt attaactgtg attataattt tctttgctat cactatcgcc tatttaactc
     8401 atgttattat agagaaaaaa tgcagcccaa cttggaaata tttatttggc ttatttgtag
     8461 caaaaccgat agaaggaata gaaaaaagat tatacaaaaa aactgaagaa tcatagtaaa
     8521 agaccacctc cttaggaggt ggtcttttaa ttaatcagat atccttgctc cgattataac
     8581 ctgatgttgt gaaaccggta cgctatcaat cgccttattt ctgttaactg tcttgactac
     8641 gatagtaaca ggagatacac cagggccatc aacatacttc agaattttag ttgtatcccc
     8701 cccagtttga gagatactaa tggggtgaga cgtcgtagtt ttaacaatag atggtgtatt
     8761 aactatggca tttcctgtaa tttcaacgtt taaccgacca aacacatgtc ttattaatga
     8821 ttctgaagag cctgatattg tgccgctata tatatttaag tcaccataaa cttctatata
     8881 cccgtttgca gtagtattta tggatccttt taccacatta agtctaaaac ttttataagc
     8941 tctaggtata cccgtaattg tggtggtaga acatatatta atatcaacac atg
//
LOCUS       DAJVTL010000153         8980 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.155, whole genome shotgun sequence.
ACCESSION   DAJVTL010000153 DAJVTL010000000
VERSION     DAJVTL010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8980)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8980)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8980
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.155"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(365..1279)
                     /locus_tag="OQQ26_003707"
                     /pseudo
     CDS             complement(365..1279)
                     /locus_tag="OQQ26_003707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001623412.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            complement(1290..1820)
                     /locus_tag="OQQ26_003708"
     CDS             complement(1290..1820)
                     /locus_tag="OQQ26_003708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001285325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HCS1859019.1"
                     /translation="MSDSRLLPTGSSPLEVAAAKACAEIEKTPVSIRELWNPDTCPAN
                     LLPWLAWAFSVDRWDEKWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLINVTE
                     WWETSDPPGTFRLDIGVLESGITEAMYQEMERLIADAKPASRHLIGLNITRDIPGYLF
                     AGGVAYDGDVITVYPG"
     gene            complement(1813..2721)
                     /locus_tag="OQQ26_003709"
     CDS             complement(1813..2721)
                     /locus_tag="OQQ26_003709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001121472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HCS1859020.1"
                     /translation="MPIIDLNQLPAPDVVEELDFETILAERKATLISLYPEDQQEAVA
                     RPLTLESEPLVKLLEENAYRELIWRQRVNEAARAVMLACAAGNDLDVIGANYNTTRLT
                     ITPADDSTIPPTPAVMESDTDYRLRIQQAFEGLSVAGSVGAYQYHGRSADGRVADISV
                     TSPSPACVTISVLSRENNGVASEDLLAVVRNALNGEDVRPVADRVTVQSAAIVEYQIN
                     ATLYLYPGPESEPIRAAAVKKLEAYITAQHRLGRDIRLSAIYAALHVEGVQRVELTAP
                     LADIVLNSTQASFCTEYRVVTGGSDE"
     gene            complement(2726..3073)
                     /locus_tag="OQQ26_003710"
     CDS             complement(2726..3073)
                     /locus_tag="OQQ26_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HCS1859021.1"
                     /translation="MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYG
                     SLLASMIDQPQTPALELQIKVACYMAVLKWEPRVTLSSVTTARSFDGRMTVTLTGQHN
                     DTGQPLSLTIPVS"
     gene            complement(3070..3699)
                     /locus_tag="OQQ26_003711"
     CDS             complement(3070..3699)
                     /locus_tag="OQQ26_003711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004999972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HCS1859022.1"
                     /translation="MNAQYNEILRFIRNMIRTGIIVETDLNAGRCRVQTGGMCTDWLQ
                     WLTHRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIYSCDNPAPSASADALHIRF
                     PDGAVIEYEPETSALTVSGIKTASVTASDSVTATVPVVMVKASTRITLDTPEVVCTNR
                     LITGTLEVQKGGTMRGNIKHTGGELSSNGKVLHTHKHPGDSGGTTGSPL"
     gene            3690..4858
                     /locus_tag="OQQ26_003712"
                     /pseudo
     CDS             3690..4858
                     /locus_tag="OQQ26_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032126.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4961..5413)
                     /locus_tag="OQQ26_003713"
     CDS             complement(4961..5413)
                     /locus_tag="OQQ26_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HCS1859023.1"
                     /translation="MNEFKRFEDRLAGLTESLSPSGRRRLSAELAKRLRQSQQRRVMA
                     QKAPDGTPYAPRQQQSARKKTGRVKRKMFAKLITSRFLHIRASPEQASMEFYGGKSPK
                     IASVHQFGLSEENRKDGKKIDYPARPLLGFTGEDVQMIEEIILAHLNR"
     gene            complement(5406..5873)
                     /locus_tag="OQQ26_003714"
     CDS             complement(5406..5873)
                     /locus_tag="OQQ26_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001406878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859024.1"
                     /translation="MLKPDSLRRALTDAVTVLKTNPDMLRIFVDNGSIASTLATSLSF
                     EKRYTLNVIVTDFTGDFDLLIVPVLAWLRENQPDIMTTDEGQKKGFTFYADINNDSSF
                     DISISLMLTERTLVSEVDGALHVKNIPEPPPPEPVTRPVELYINGELVSKWDE"
     gene            complement(5836..5994)
                     /locus_tag="OQQ26_003715"
     CDS             complement(5836..5994)
                     /locus_tag="OQQ26_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage lysis protein"
                     /protein_id="HCS1859025.1"
                     /translation="MPGSDPQTNGDLSADIRQLENALARCASQVKMIKHCQDENDAQT
                     RQPAQGVD"
     gene            complement(5981..6406)
                     /locus_tag="OQQ26_003716"
     CDS             complement(5981..6406)
                     /locus_tag="OQQ26_003716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HCS1859026.1"
                     /translation="MSRLMIVLIVLLSLAVAGLFLVKHKNASLRASLDRANSVASGQQ
                     TTITMLKNQLHVALTRAEKNELAQVALRQELENAAKREAQREKTITRLLNENEDFRRW
                     YGADLPDAVRRLHQRPACTDASDCRQRLPESESLPDAGQ"
     gene            complement(6394..6819)
                     /locus_tag="OQQ26_003717"
     CDS             complement(6394..6819)
                     /locus_tag="OQQ26_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000736581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysA"
                     /protein_id="HCS1859027.1"
                     /translation="MKKLSLSLMLNVSLALMLALSLIYPQSVAVNFVAAWAILATVIC
                     VVAGGIGVYATEYVLELYGRELPPESLAVKIVTSLFLQPVPWRRRAAALVVMVATFIS
                     LVAAGWIFTALIYLVASLFFRLIRTACRQRLEGREPCQG"
     gene            complement(6834..7331)
                     /locus_tag="OQQ26_003718"
     CDS             complement(6834..7331)
                     /locus_tag="OQQ26_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 104 protein"
                     /protein_id="HCS1859028.1"
                     /translation="MPVINTHQNIAAFLDMLAVSEGTANHPLTKKRGYDVIVTGLDGK
                     PEIFTDYSDHPFAHGRPAKVFNRRGEKSTASGRYQQLYLFWPHYRKQLALPDFSPLSQ
                     DRLAIQLIRERGALDDIRAGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTA
                     GGVPA"
     gene            complement(7331..7612)
                     /locus_tag="OQQ26_003719"
     CDS             complement(7331..7612)
                     /locus_tag="OQQ26_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000123123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HCS1859029.1"
                     /translation="MTAEEKSVLSLFMIGVLIVVGKVLAGGEPITPRLFIGRMLLGGF
                     VSMVAGVVLVQFPDLSLPAVCGIGSMLGIAGYQVIEIAIQRRFKGRGKP"
     gene            complement(7619..7909)
                     /locus_tag="OQQ26_003720"
                     /pseudo
     CDS             complement(7619..7909)
                     /locus_tag="OQQ26_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009309690.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
     gene            complement(7913..>8980)
                     /locus_tag="OQQ26_003721"
     CDS             complement(7913..>8980)
                     /locus_tag="OQQ26_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001248534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HCS1859030.1"
                     /translation="QETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQ
                     ESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTTDTAGGTERQPKDFSKLASNKYECD
                     QINFDFYIRYKTLDLWARYQDFQLRVRNAIIKRQSLDFIMAGFNGVKRAETSDRSSNP
                     MLQDVAVGWLQKYRNEAPARVMSKVTDEEGRTTSEVIRVGKGGDYASLDALVMDATNN
                     LIEPWYQEDPDLVVIVGRQLLADKYFPIVNKEQDNSEMLAADVIISQKRIGNLPAVRV
                     PYFPADAMLITKLENLSIYYMDDSHRRVIVENPKLDRVENYESMNIDYVVEDYAAGCL
                     VEKIKVGDFSTPAKATAEPGA"
BASE COUNT         2104 a         2474 c         2266 g         2136 t
ORIGIN      
        1 caacataaaa aacactacat acatcatcat ctttcaggct tgtaacaatg gaatggattg
       61 aacgctcatt agtctgatac gtccagtaat aacctgccgc atatgaacca cgatcagtcc
      121 agcctcctgg cataaccatg ccattaaact cgcagttatt cattacataa tcgccgttat
      181 aacaaccagt ggaaataaca acgcgggatg ccatttctcc tgaaaggctg gcagcacggc
      241 gaaagataac ggggtaccac ttcccggcaa cgacatttgc aggggctgca aacgaatact
      301 ttcgcattcc ctttttctta tccacttcac ctttgctgta aacattaatg ttactcagga
      361 agcgttcttt atcagggata tccgcaccgt tctgatcttt ctgaagacgt ttttcagcat
      421 tgtcataggc agacttcacc gcctttggcg ttgcagcctg cgtttcagaa tcactgttgg
      481 tggcgctact gagctgaaca aggccttttc gcgctgttgt ggcatcctgt gcagtgtatt
      541 tcccgttagc aaggtcatat gctttcggcg ttgcggcgag cgtttcagac gtgctgttag
      601 tcgcactact gagctgaaca aggccttttc gcgcggtggt ggcatcctgc gcggtatatt
      661 tcccgttagc aaggtcatag gcggtcttta ccgctctcgg cgttgcagcc agtgtttcag
      721 acatgctgtt ggtcgcactg cttaactgag taaaaccttt tgcggtcagc gaggcgtccg
      781 ggtgacgtcg tgactgttcg tgctctgcaa ttttgtcatc aacgtaatcc tgcgtcgcca
      841 tcaccgttgt ggtgtcaatg gtcagctcca ctgaggccac actgctgacg atgatgacca
      901 tacggcaggt ctgcgaacgc cctgagcctt cggcaagagc tggcttataa ctttcggcca
      961 tgttcgccac ggcaattaac gttcccgcat catcgtacag gccaagctca cgcatccaga
     1021 aaccgcccac ctccggcgga ataaccagct ctgcgataat ataattactg tttcgtttgt
     1081 cttggctgat tttgttcagc gcatgtcgcc agacttcatg gataagcccg gtctgtccgg
     1141 catccgggac aggcaattta ccaccgccat ccccgacggc catcgtggta atgttgacct
     1201 tccgccctcc cggtgcggtt gccgctgcca gctttgctgc accggcagtg gtgataacgg
     1261 ttctgaattt tgtgctcatt attcctcact tatccggggt aaaccgtaat tacatcgccg
     1321 tcataagcca caccaccggc gaacaggtag ccgggaatgt cccgggtaat gttcaggcca
     1381 ataaggtggc ggcttgcagg tttggcatca gcaatcagcc gttccatttc ctgatacatt
     1441 gcctctgtga tgccactttc cagtacacca atatcaagcc ggaaggtgcc cggcgggtca
     1501 ctggtttccc accactccgt cacgttgatg agatagccta gcggctccac cacacgccgg
     1561 attgcaccta tagtgccttt atgacagtgg atgaaatagg catcgcgaat aacggcgcgt
     1621 ttggtcgctt ccggccactt ttcatcccac ctgtcgaccg aaaacgccca cgccagccac
     1681 ggcagcagat ttgccgggca ggtgtccggg ttccacagct cacgaatact gaccggtgtt
     1741 ttttcaattt ccgcacaggc ttttgcggcg gcgacttcaa gcggtgatga gccggtcggc
     1801 agcagtcgcg aatcactcat ccgagcctcc ggtcacgacg cggtattcag tacagaaaga
     1861 cgcctgcgta ctgttgagca cgatgtcagc cagcggtgca gtcagttcga cacgctgcac
     1921 gccttccaca tgcaaagcgg cataaatggc agacagacgg atgtcgcgcc ccagccggtg
     1981 ctgtgccgtg atgtacgctt ccagtttttt cacggcagca gcgcggatgg gttcgctttc
     2041 gggacctggg taaaggtaaa gtgtggcgtt tatctgatat tcaacaatgg cggcagactg
     2101 cacggtcacg cggtcggcca ccggcctgac gtcctcgcca ttaagggcgt tacgcaccac
     2161 ggccagcagg tcttcggatg cgacgccgtt attttcacgt gacagcacgg agatagtgac
     2221 gcaggccgga gacggactgg tgacagagat atccgcgaca cgcccgtcag cactgcgacc
     2281 atgatactga taggctccca ccgacccggc gacgcttaag ccttcaaacg cctgctgaat
     2341 acgcagacga taatccgtgt cagactccat cactgccggt gtcggcggga tagtcgaatc
     2401 atctgccggg gtgatagtca gacgcgtggt gttgtaattg gcaccaatca catcaaggtc
     2461 attaccggcg gcacaggcca gcatcaccgc ccgtgcggcc tcattcacac gctgacgcca
     2521 gataagctca cgataagcat tttcctccag cagtttgacg agaggctcag attccagcgt
     2581 caggggacgg gcgaccgcct cctgctggtc ttccgggtaa agggaaatca gtgtcgcctt
     2641 gcgttcggcg agaatggttt caaagtccag ctcctcgacc acatccggtg cgggtagctg
     2701 gttcaggtcg ataatcggca tggtttcaac tcacagggat ggttaacgaa agtggctggc
     2761 cggtgtcgtt gtgctggccg gttaacgtga ccgtcattcg cccatcaaag ctgcgcgccg
     2821 tggtgacgga tgacagggtg acgcggggtt cccatttcag caccgccatg taacaggcga
     2881 ccttaatctg caactcaagc gccggggtct gcggctggtc aatcattgac gccagcaacg
     2941 agccgtaatc acgacgcatc acccgtgagc cgaccggtgt gcgcaggata tcgccgatac
     3001 tctggctgat atgctcaagg tcagtgaccg tcaggccatc actgcgattc attccaagat
     3061 aacgcgctgt catagaggac tcccggttgt gccgccgctg tcgccggggt gtttatgggt
     3121 atgcagtacc ttaccgtttg atgagagttc accgccggta tgtttaatgt tgccgcgcat
     3181 cgtcccgccc ttctgcactt ccagcgtgcc ggtaatcagt ctgttggtgc agaccacctc
     3241 cggggtgtcc agggtgatgc gggttgacgc tttcaccatg accaccggca ccgtggcagt
     3301 aacagaatca gaagccgtca cgctggccgt tttaattccg cttaccgtga gtgcactggt
     3361 ttcgggttca tactcaatca ccgccccgtc agggaaacgg atatgcaggg catccgccga
     3421 cgcagacggc gcggggttat cgcaggaata aatccccggc agaacgaacg ccgtgtcgag
     3481 ttcaccgccc acggccagaa tcagcacctg ttcccccacg gaaggtgccc accatgtgcg
     3541 cgaacgtccg gcgcgatggg tcagccactg aagccagtcg gtgcacatgc cgccggtctg
     3601 cacacggcag cgaccggcat taaggtcggt ttcgacaata atgccagtgc gaatcatatt
     3661 gcgtataaag cgaagaattt cattgtattg tgcattcatt cgataataat gattctgtac
     3721 aatctcgaag taaatcacac cacgatttct ggtgcacaga acaacaaggg acaacaaaat
     3781 ccattatgag tacttacttt ttctcgtcag aaacaatgaa agaattgttc aaagattatc
     3841 tggtcttttt gaacacgctg actcccggca caaactttga atcaaacaga aacaaaataa
     3901 ttgctcaagc aataaacttc atttccgaaa accctgaaga ttgggacaaa aaatcccagc
     3961 acaacattgc tatgattggc gacaccttta aaagtttctt aagaaaaaag ggagaagata
     4021 acaacagcat caaccttata ttcacttgct tttttagctt tatcattgaa ccaagcattc
     4081 tctctccgga aatagagtct cacttttcac cactaagaac catcaaggat tttgctctgt
     4141 ataactataa tgaattcgat gagcggagca gagcacagat agacttttct cttagagaac
     4201 tgccattagc aatggttaaa gaagttttaa gctccagcaa tgttgacaca tataaaaaat
     4261 acattgatag tttaaacgaa gggcgtcaat ttttcgaaaa gtgcgactcc ttcttaaagg
     4321 agcaacatgc caaaatagag tcaatcaaat agtcattaaa agggtatgag gtcgcattta
     4381 attttgttgg attgtttgaa ggctttaatt cacttggcaa aaaaaagaaa gtgcaatcat
     4441 gctatcaaga ataattctta tcatcttggc tataatcatt ccctcccagc tgatatacta
     4501 tggaatgcat aaattaccag ctctcgaaac gacaaatgct gccacatatt ttatgtcagc
     4561 actacctttt gcatcagtta cattgatttt catgtattac tttagagttg tactgctaaa
     4621 tcatatatcg ttacgaactc agattatgca aatagaactc agaaagagcc tttgtcagtt
     4681 cattcagagt tatagcgact attcctcaga gataaggaaa aacaatccgg aagcgctttc
     4741 aaaattcgaa gacgtagtat tttcaaacat catgctatcc gatgataaga taccatctac
     4801 atttgatggc attgagcaaa tagcatcgtt aatcaattca ttaaaaaatg gaaagtaatg
     4861 ataaaaggcc aataactggc cttttattta ttaacatgaa aattcaaaat aaattatgct
     4921 aatcaattga tttctatctt atattctcag atgattaaag ctaacgattc aggtgagcca
     4981 ggataatctc ttcaatcatc tgcacatcct caccggtaaa gccgagcaga ggacgcgccg
     5041 gataatcaat tttcttaccg tctttccggt tttcttccga cagaccgaac tgatgcacac
     5101 tggcgatttt cggtgacttc ccgccgtaaa actccattga tgcctgttcc gggctggcgc
     5161 ggatatgcaa aaaacgactg gtgataagtt tcgcaaacat ttttcgctta acgcgaccgg
     5221 tcttttttct ggcgctctgc tgctgacgtg gcgcgtaggg tgtgccgtcc ggggctttct
     5281 gtgccatcac ccgacgctgc tgactctgac gcagacgttt cgccagttcg gcgctcagtc
     5341 gccgacgccc tgacggtgac agcgattcag tcagtccggc cagccggtct tcaaaacgct
     5401 taaactcatt catcccactt gctcaccagt tcgccattga tataaagctc caccgggcgg
     5461 gtaaccggct ccggcggcgg aggttcaggg atattcttca catgcagcgc gccgtccacc
     5521 tcactgacca gcgtgcgctc ggtcagcatc aggctgatgc ttatatcaaa gctgctgtca
     5581 ttgttgatgt ctgcataaaa cgtgaagccc tttttctggc cttcgtcggt ggtcatgatg
     5641 tcgggctgat tttcccgcag ccacgccagc accggcacga tgagcaggtc aaaatcaccg
     5701 gtaaagtcgg tcacaatcac attgagcgtg taacgctttt cgaacgacag cgacgtcgcc
     5761 agtgtggagg caatactccc gttatccacg aatatccgca gcatatcggg gttagttttc
     5821 agcaccgtga cggcatcagt caacgccctg cgcaggctgt cgggtttgag catcgttttc
     5881 gtcctgacag tgtttaatca tttttacctg gctggcacag cgtgccagcg cgttctcaag
     5941 ctgcctgata tcagcactta aatcgccgtt cgtctgcggg tcactgcccg gcatcgggca
     6001 aagactcact ttcgggcagg cgttggcgac aatcactggc gtcggtgcag gccggacgct
     6061 ggtgcaaccg gcgcacagca tcaggcaggt cagcaccgta ccagcggcga aaatcttcgt
     6121 tttcattgag taacctcgtg atggttttct cgcgctgtgc ttcacgcttc gcggcgtttt
     6181 ccagttcctg acgcagtgcc acctgcgcca gctcgttttt ttctgccctg gtgagcgcaa
     6241 catgaagctg atttttcagc atggtgatgg tcgtctgctg cccgctggcg acgctgttcg
     6301 ccctgtccag cgaagcgcgc aggctggcat ttttgtgttt caccagaaac agacccgcca
     6361 ccgccagcga taacaacaca atcagtacaa tcatcagcct tgacatggtt cccgcccctc
     6421 aagacgctga cggcaggccg tgcgtatcag ccggaaaaac agcgacgcta cgagataaat
     6481 cagcgcggta aaaatccacc cggcagcgac cagcgagata aatgtcgcca ccatcacaac
     6541 cagagccgcc gcccgtctgc gccacggcac cggctgcaaa aacagcgacg tgacaatctt
     6601 cacggccagc gattccggcg gcagctcccg cccgtagagt tccagtacat actcagtggc
     6661 atacacgcca ataccaccgg caaccacaca gataaccgtc gccagaatcg cccaggcggc
     6721 gacaaaattg acggccacgc tctgcgggta aatcagggac agtgccagca tcagcgccag
     6781 cgacacgttc agcatcagtg aaagggataa tttcttcatg gtgtttactc cgtttaagca
     6841 ggtacgccgc cagcggtacg ccagacggtg accagttttt ccagtgaatg ctcacgctga
     6901 ccgtaaccgg cacccggcag ggacgcccag atattgcgac agcgtgaaat ggcgcgctca
     6961 atgcgtcccg cccggatgtc atccagtgca ccgcgttcac ggatcaactg aatggcaagt
     7021 ctgtcctgtg acaacggact gaaatccggc agggcaagct gtttgcggta gtgcggccag
     7081 aacaggtaaa gctgctgata gcgaccggag gccgtggatt tttcaccgcg acggttaaac
     7141 accttcgccg gtcggccatg cgcgaacggg tggtcactgt agtcggtgaa aatttccggc
     7201 tttccgtcca gtccggtgac tatcacgtca tagccccgtt ttttcgtcag cggatgattc
     7261 gccgtccctt cggacacggc cagcatgtcg agaaaggcgg cgatattctg atgcgtgtta
     7321 ataaccggca ttacggtttc cccctgccct taaagcggcg ctgaatggca atctcaatca
     7381 cctgataacc ggcgataccc agcatggagc caatgccgca caccgcaggc agtgacaggt
     7441 caggaaactg caccagaaca acaccggcaa ccatcgagac aaaaccaccg agcaacatgc
     7501 gcccgataaa cagacgcggg gtgatgggtt caccaccggc aagcaccttg ccgacaacaa
     7561 tcagcacccc aatcatgaaa agcgacagaa cgcttttttc ttctgctgtc atgcgttact
     7621 cccacagatt gacagtttca gccacgggcg cggtctgaac gtcgggcagt tcgacggcgg
     7681 tgccgtgcgg cagcacgcca ttcacccacg gcaaccagaa cggcagcagt tcgcgttttt
     7741 tcgcggcctt cagctctttt gaataaattg ctttcagtgt gcgctggtct acggcgagct
     7801 taaccagcat ctgctcatag acagttgcat gtcgcagcgg ggctgcttcc cgctgcgcgg
     7861 tcatcgctgc cgagacccgc atcatgtggc gctgtgcggg actcgtcatc ggttacgctc
     7921 ccggctctgc ggtcgcttta gccggtgtgg agaaatcacc gaccttaatt ttctccacca
     7981 gacaaccggc tgcatagtct tccaccacgt aatcaatgtt cattgactcg tagttctcca
     8041 cgcggtcgag tttcgggttt tccacaatca cgcggcgatg gctgtcatcc atgtagtaga
     8101 tggacaggtt ttccagcttc gtgatgagca tcgcatccgc cgggaagtac gggacgcgta
     8161 ccgccggcag gttaccgatg cgtttctggc tgatgatgac atcagcggcc agcatttcgc
     8221 tgttgtcctg ctctttgttg acgatgggga aatacttgtc cgccagtagc tgacgtccca
     8281 caatcaccac aaggtcaggg tcttcctgat accacggttc aatcaggttg ttggtcgcat
     8341 ccatcaccag tgcatcaagg ctggcataat cgccgccctt acccacgcgg ataacctcag
     8401 aggtggtgcg cccttcctcg tcagtgacct tgctcatcac gcgcgccggg gcttcattgc
     8461 ggtatttctg caaccagccg accgccacat cctgcaacat cggattgctg ctgcggtcag
     8521 aagtttcggc acgcttcacg ccgttaaaac cggccatgat gaaatcaagg gactggcgtt
     8581 tgataatggc gttacggaca cggagctgga aatcctgata acgcgcccac aggtcaagcg
     8641 ttttgtagcg gatataaaaa tcgaagttaa tctggtcgca ttcgtacttg ttagacgcca
     8701 gcttcgagaa gtccttcggc tgacgctcag tgccaccggc ggtgtcggtg gtgctggcga
     8761 tggagccggt gacaccgatg ccaatttttt cccctttcat ttcgctgacc ggcacaatgt
     8821 tgatgcgggt cagaaagtca gaggactcct gcatggtgtt catcagggtc tgggtgaccg
     8881 acggttcaac ggtgaatttt ttcgacacat caccggcgtc gatgccgttc agttcggcaa
     8941 cacgggacag gtaggcatta aatttaaagc gggtttcctg
//
LOCUS       DAJVTL010000154         8790 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.156, whole genome shotgun sequence.
ACCESSION   DAJVTL010000154 DAJVTL010000000
VERSION     DAJVTL010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8790
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.156"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..129
                     /locus_tag="OQQ26_003722"
     CDS             <1..129
                     /locus_tag="OQQ26_003722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HCS1859031.1"
                     /translation="NTFEGYYDWSRNKWWAVTDDGEDPASKVTHWMPLPEPPQEAK"
     gene            126..386
                     /locus_tag="OQQ26_003723"
     CDS             126..386
                     /locus_tag="OQQ26_003723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eaa protein"
                     /protein_id="HCS1859032.1"
                     /translation="MMDVKEKVLQVMRSRSALQEKALGGEYPFRMATWNLRLAMEKEF
                     PDEKWRSADLRKILMELAKDGAVSKDTYASRIGQAVWRLEVR"
     gene            386..667
                     /locus_tag="OQQ26_003724"
                     /pseudo
     CDS             386..667
                     /locus_tag="OQQ26_003724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504539.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
     gene            1052..1219
                     /locus_tag="OQQ26_003725"
     CDS             1052..1219
                     /locus_tag="OQQ26_003725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859033.1"
                     /translation="MHFRVTGEWNGEPFNRVIEAENINDYYDHWMIWAQIAHADVTNI
                     RIEELKEHQSA"
     gene            1277..1477
                     /gene="torI"
                     /locus_tag="OQQ26_003726"
     CDS             1277..1477
                     /gene="torI"
                     /locus_tag="OQQ26_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator inhibitor TorI"
                     /protein_id="HCS1859034.1"
                     /translation="MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKLIHG
                     RARWLYRDHCEFKNKLLSRANG"
     gene            complement(1659..2594)
                     /gene="dsdC"
                     /locus_tag="OQQ26_003727"
     CDS             complement(1659..2594)
                     /gene="dsdC"
                     /locus_tag="OQQ26_003727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator DsdC"
                     /protein_id="HCS1859035.1"
                     /translation="MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPS
                     AVSHRINQMEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELS
                     GTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAP
                     SAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHS
                     WAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMT
                     VKCHQHYYITTLPGRQWPKIEAFITRLREQVKTTS"
     gene            2812..4149
                     /gene="dsdX"
                     /locus_tag="OQQ26_003728"
     CDS             2812..4149
                     /gene="dsdX"
                     /locus_tag="OQQ26_003728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine transporter DsdX"
                     /protein_id="HCS1859036.1"
                     /translation="MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMM
                     GMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSAD
                     VIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPP
                     HPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLK
                     VRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYTLLEFIGNPITAMFIAV
                     FVAYYVLGIRQHMSMGTMLTHTESGFGSIANILLIIGAGGAFNAILKSSSLADTLAVI
                     LSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGS
                     GAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII"
     gene            4167..5495
                     /gene="dsdA"
                     /locus_tag="OQQ26_003729"
     CDS             4167..5495
                     /gene="dsdA"
                     /locus_tag="OQQ26_003729"
                     /EC_number="4.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
                     /protein_id="HCS1859037.1"
                     /translation="MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVDL
                     TEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQ
                     LLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQ
                     YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGV
                     AVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYL
                     PCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNL
                     TAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEESIRLEPSALAGMA
                     GPQRVCASVSYQQMHGFSAEQLRNATHLVWATGGGMVPEEEMNQYLAKGR"
     gene            complement(5603..7141)
                     /gene="emrY"
                     /locus_tag="OQQ26_003730"
     CDS             complement(5603..7141)
                     /gene="emrY"
                     /locus_tag="OQQ26_003730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrY"
                     /protein_id="HCS1859038.1"
                     /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
                     SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
                     STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
                     LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG
                     GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
                     GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
                     IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
                     GLPDNKFANAASMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS
                     SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIVFILLTVLVWFAKPPFTA
                     KGVG"
     gene            complement(7141..8304)
                     /gene="emrK"
                     /locus_tag="OQQ26_003731"
     CDS             complement(7141..8304)
                     /gene="emrK"
                     /locus_tag="OQQ26_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrK"
                     /protein_id="HCS1859039.1"
                     /translation="MEQINSNKKQSNRKKYFSLLVIVLFIAFSGAYAYWSMELEDMIS
                     TDDAYVTGNADPISAQVSGSVTVVNHTDTNYVRQGDILVSLDKTDATIALNKAKNNLA
                     NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL
                     ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIRSPVTGY
                     IAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV
                     VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM
                     TATIDTKNEDIAEMPELASNVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
     gene            8720..>8790
                     /locus_tag="OQQ26_003732"
     CDS             8720..>8790
                     /locus_tag="OQQ26_003732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="response regulator in two-component regulatory
                     system with EvgS; phosphorylated EvgA activates ompC,
                     emrKY, gadABC, hdeAB and others genes; involved in acid
                     resistance, osmotic adaption, and drug resistance; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HCS1859040.1"
                     /translation="MNAIIIDDHPLAIAAIRNLLIKN"
BASE COUNT         2463 a         1949 c         1981 g         2397 t
ORIGIN      
        1 aataccttcg aagggtatta cgattggtcg agaaacaaat ggtgggcagt tactgacgat
       61 ggggaagatc ctgcatcaaa agtaacccac tggatgccgc taccggaacc gccgcaggag
      121 gcaaaatgat ggatgtaaaa gagaaggttt tgcaggtgat gcgttcccgt tctgccctgc
      181 aagagaaagc tctcggcggg gaatatccat tcaggatggc aacctggaat ctgcggttgg
      241 caatggagaa ggaatttcct gatgaaaaat ggcgttcggc agatttgcgc aaaattctta
      301 tggagctggc taaagacgga gcagtatcca aagataccta tgccagccgg attggtcagg
      361 cggtatggag actggaggtg cggtaatggc taacctgcaa cttgccgtca aaggtgaata
      421 cttcgatgcc atgattcgca gagagaaaac ggaagagtat cgcctgtgta atgactatta
      481 gaataagcgc ctcgttaacc gtaagtatga ccgcctgatt atcacaaagg gatatccgaa
      541 gcgcgacgat tccagccgca gaattgacgt cccgtatgga ggatatgaag tgaaaacaat
      601 cacacatccc cacttcggtg ataaaccgat aaaggtatac gcgataaagg tgaatatcaa
      661 ttgctaaatt agtagcatag cataaagatg cttgcattaa tgaagtgtgt ataataacgc
      721 ctcatcaata gtaaactact gaaatagcaa aaaaacgcat attaaagagg attcgaaaat
      781 tgaaaatgtt catgcaaata gacagacgca tagatattaa tggcaattca tacttagtta
      841 gatgcgaaga gaggcctaac ggtgagtggc gtgtatatga tattgaccgt aaggtcaata
      901 tcagcaccat gaacaaagac actgcctttg atgaatggaa agctgaagct aaaaaacaac
      961 ataattcgta gaattacaaa aaccctaacc aattgatgga tttcttttat ctgaactcgc
     1021 tacggcgagt tttgttttat ggagatgata aatgcacttc cgagtcacag gtgaatggaa
     1081 tggagaacca ttcaacagag ttatcgaagc ggagaacatc aacgactact atgaccactg
     1141 gatgatatgg gcgcagatag cgcatgcaga cgtaaccaat attcgaattg aagaactgaa
     1201 agaacaccaa tccgcctgat ggcggttttt tattgcctga ttttcatgtt cgattcccta
     1261 ttcggagata gcactcatgc aacacgaact acagcctgat tcactggttg atttgaaatt
     1321 catcatggcc gatactggct tcggtaaaac cttcatctac gaccggatta agtccggcga
     1381 cctgccaaaa gccaaactta tccacgggcg agcaagatgg ttatatcgtg accattgtga
     1441 attcaaaaat aagctcttaa gccgcgccaa tgggtaaaat agcgggtaaa atatttttca
     1501 catccaaaaa ataccattcc aatcaatccc ctgcatcctc aattagatgt ctgcagggac
     1561 accatccttg tgtttatccc taaaaccaca aaaaaccgta aattaaattc gaactagcag
     1621 gccgaataag gcacaccagg aactcgtagt tttattcatt atgaagtggt ttttacctgt
     1681 tctcttaacc tggtaataaa cgcttcaatt tttggccact gcctgcccgg taatgtggtg
     1741 atgtaataat gctgatggca tttcaccgtc atatcgccaa acggcgcgac gagctcacca
     1801 ctggcaagcc ttttttgtac caggcgtttt cttcccatcg ccaccccaat atgattcatc
     1861 gcggcaataa cagctaaatc agaacgatca aagccaattc cagaagatgt cggcaaatta
     1921 accgcataat gttgcgccca actatgccat tcatccgtac cggagtcgtt gctccatgcc
     1981 tgtctgtcat ggagcaacgt acagtgacac aggttaatta ccgtgttggt taaagcatgt
     2041 ctttgagcgt attccgggct acatactggc aggatttctt catccatcag aaagtgatga
     2101 gtcagttgcg ctgacggcgc atcatcaaag tagatcgcca aatcgattcc ggcacgttgc
     2161 agattgacgt tgtcattacc agtgagcacg gtgagcgaaa tagacggata ccggcgtgta
     2221 aagtcaccta atgcgggcac caaccagcat tgggcgatag agggccggga atacagagtt
     2281 aacgttcccg ataactcctg atttttgata tcaagaattt cctggttcag ggtatccagc
     2341 gacgatttta gcgcccaata aacacgtttc ccctcgtgcg ttaattccac tttgcgatgg
     2401 gaacgaacaa acaactgaat gcccaattct tcttccatct gattgatacg gtgacttacc
     2461 gcactggggc tcagcgacaa ttcctctgcc gccagggcga aggactgatg cctggcagcc
     2521 acttcaaaag tatgcatttt tgataattgc cagccgttaa gcagccgatt tcttatttca
     2581 cgaaggggtt ccataatcac ctcatttttc gcttaagtgt aaaaaaatag cggcaaaatt
     2641 tcagctgtaa ggtgagctaa agtgaaccat atcgcaattc accttcattt ttagatgtaa
     2701 atcactccat tgatgcaatt tatctcatgt gaaaggcaaa ttttatcgtt tgtcaacctg
     2761 agttgttttt ttgtccaata tcatcaggtt aatcacaggg gaaggtgaga tatgcactct
     2821 caaatctggg ttgtgagcac gctgcttatc agcatcgtgt taattgtact gaccatcgtg
     2881 aagttcaaat tccacccgtt tctggcgctg ttactggcca gcttcttcgt gggaacgatg
     2941 atgggcatgg ggccactgga tatggtaaat gctattgaaa gtggaattgg cggaacgctg
     3001 ggtttccttg ctgcggttat cggcctgggc acgatactgg gaaaaatgat ggaagtatcc
     3061 ggggccgcag aaagaattgg tctgacactt caacgctgcc gctggctttc ggctgatgtc
     3121 attatggtgc tggttggcct gatttgtggc atcacgctgt ttgttgaagt gggcgtcgtg
     3181 ctattgattc ctctggcttt ttcaattgcc aaaaaaacca atacctcatt attaaagctg
     3241 gccattccgc tgtgtaccgc attgatggca gtgcactgcg tggttcctcc acatccggct
     3301 gctttatatg ttgccaataa gctgggcgca gatatcggtt cggtgatcgt ctacggtttg
     3361 ctggttgggc tgatggcatc actgatcggt ggcccacttt tccttaaatt tctgggtcaa
     3421 cgactgccct ttaaacctgt acccacagag tttgccgatc tcaaagttcg cgatgaaaaa
     3481 acactaccgt cattaggcgc aacgttattc accatactgc tacccattgc gctgatgttg
     3541 gtgaaaacga ttgccgaatt gaatatggcg cgtgagagtg gtttgtatac cttgcttgag
     3601 tttattggca accctatcac tgccatgttt atcgccgtgt ttgtcgccta ttatgtgttg
     3661 ggtatacgcc agcatatgag catgggtacg atgctcacac atacggaaag tggcttcggt
     3721 tctattgcta atattttgct gattatcggg gcaggaggcg cattcaacgc cattttaaaa
     3781 agcagcagtc tcgctgatac gctggcagtt attctctcca atatgcatat gcacccgatt
     3841 cttctggcct ggttagtggc tcttattctg catgctgcag tgggctccgc taccgtggca
     3901 atgatggggg caacggcaat tgttgcaccc atgctgccgc tgtatcccga catcagcccg
     3961 gaaattattg cgattgctat cggttcaggt gcaattggct gcacgatcgt tacggactcg
     4021 cttttctggc tggtgaagca atattgcggc gctacgctca atgaaacatt taaatactat
     4081 acgacagcga catttatcgc ttcagtcgtc gctctggcgg gcacattcct gctgtcattt
     4141 atcatctaag cgcaaagaga cgtactatgg aaaacgctaa aatgaactcg ctcatcgccc
     4201 agtatccgtt ggtaaaggat ctggttgctc ttaaagaaac cacctggttt aatcctggca
     4261 cgacctcatt ggctgaaggt ttaccttatg ttgacctgac cgaacaggat gttcaggacg
     4321 cccatgcgcg cttatcccgt tttgcaccct atctggcaaa agcatttcct gaaactgctg
     4381 ccactggggg gattattgaa tcagaactgg ttgccattcc ggctatgcaa aaacggctgg
     4441 aaaaggaata tcaacaaccg atcagcgggc aactgttact gaaaaaagat agccatttgc
     4501 ccatttccgg ctccataaaa gcacgcggcg ggatttatga agtcctggca cacgcagaaa
     4561 aactggctct ggaagcaggg ttgctgacgc ttgatgatga ctacagcaaa ctgctttctc
     4621 cggagtttaa acagttcttt agccaataca gcattgctgt gggctcaacc ggaaatctgg
     4681 ggttatcaat cggcattatg agcgcccgca ttggctttaa ggtgacagtg catatgtctg
     4741 ctgatgcccg ggcatggaaa aaagcgaaac tgcgcagcca tggcgttacg gtcgtggaat
     4801 atgagcaaga ttatggtgtt gcagtcgagg aaggacgtaa agcagcgcag tctgacccga
     4861 actgtttctt tattgatgac gagaattccc gcacgttgtt ccttgggtat tccgtcgctg
     4921 gccagcgtct taaagcgcaa tttgcccagc aaggccgtat cgtcgatgct gataaccctc
     4981 tgtttgtcta tctgccgtgt ggtgttggcg gtggtcctgg tggcgtcgca ttcgggctta
     5041 aactggcgtt tggcgatcat gttcactgct tttttgccga accaacgcac tccccttgta
     5101 tgttgttagg cgtccataca ggattacacg atcagatttc tgttcaggat attggtatcg
     5161 acaaccttac cgcagcggat ggccttgcag ttggtcgtgc atcaggcttt gtcgggcggg
     5221 caatggagcg tctgctggat ggcttctata cccttagcga tcaaaccatg tatgacatgc
     5281 ttggctggct ggcgcaggaa gaaagtattc gtcttgaacc ttcggcactg gcgggtatgg
     5341 ccggacctca gcgcgtatgt gcatcagtaa gttaccaaca gatgcacggt ttcagcgcag
     5401 aacaattgcg taatgccact catctggtgt gggcgacggg aggtggaatg gtgccggaag
     5461 aagagatgaa tcaatatctg gcaaaaggcc gttaataacg tttcaacgca gcatcgccat
     5521 cctttccctg ggtgagcgat gctgccgatg gcgcagactt aagatccccg gtcttacccg
     5581 ctataacccc ctccttttac catcacccaa cgcctttcgc tgtaaacggc ggtttcgcaa
     5641 accaaaccaa aactgtaagt aagataaaaa caatagccgc catacggaaa atctcatttg
     5701 cagaaattga aagtgactgc tgagttattt cattattaat ttcattaaga acccctgaaa
     5761 gcgaaccata gtatttatcc ataatttgtg acgatgaatt aaacacgggg ttaaattgat
     5821 cgatggttgc tgtcaactga ctatggtgta atgattctcg gcgtccccac agcgtcattg
     5881 tcaacgacgt accaactgat cctgacaagg tacgaaaaaa attactcata ctcgcggcat
     5941 tggcaaattt attatctggc aaacctgaaa acgaaatcgt tgttaagggt aaaaagaaac
     6001 aggcaacggc gaatccctga aaaaactgcg gcaaaatgat gcctgtaaaa tcaatcgttg
     6061 gcataaatgt cacagaacgc cagtaatagc aaaccgcata catcaaaaaa ctaaatgtca
     6121 ctaacaaccg catgtctatt ttgttgccat aacgtcctat caaaggtgaa attaatagtg
     6181 gcatgatgcc gatgggcgca taagcaagtc cggcccatat cgcattatac cccatcgttt
     6241 cctggagtaa ctgcggcata aggacgatcg ctccagagta aaataaatac gcgcatgtga
     6301 tactcacaat accaatggtg aagttacggg acttaaacaa actgagatca agaatcgggt
     6361 tctctgaggt cgactcccaa atgactaaag agatcagaga aataactgat actactgtta
     6421 atattattat tgtactcgag ttgaaccaat ccagatcgcg ccctttatca agcataattt
     6481 gcaagccacc aacaccgagc actaacaggg tcagtcctgg tagattcatt ttgaccggtg
     6541 aagtctcagt ttctcttcct ttaagtaagg ttaagcataa tgtcaggacg ataatcccca
     6601 tagggacatt gattaaaaat atccaacccc agctaaagtt atcacaaata tagccgccca
     6661 atatcggccc acatatcggt gcgataatca cggtcattga ccataatgcc agagcaaatg
     6721 ttcttttttc tggtggataa ttccttaata ataaactctg tgacagtgga attaacggcc
     6781 ccgccattaa cccctgaacg actctaaaaa atatcagcac atcaagattg gtcgataaac
     6841 tacacattaa tgaagacagc gaaaaaaaag tgactgaaag taaaaataac cttaattcgc
     6901 ctattctttg tgccagcctg ccggtaacag ggatcgcaat agcatttgct acgccaaacg
     6961 aggtgataac ccaggtgcct tcgtctgttg atgctcccag aaagccagat attgtcggta
     7021 ttgcgacgtt agaaatagtg gaatccaaca tttgcataaa cgtcgctaat gataatgcaa
     7081 tagtgacgca ccataacgtc ccaccggtta atggtgccgg agttgattta gtgattgcca
     7141 ttaaagttgt ccattatgcg aaataatgtt gctaatttct ttttctatcg gactggtatc
     7201 gataactaaa gccttactgg tataagccgg catggacgtc acgtttgaag ccagctcagg
     7261 catctcagca atgtcttcgt tcttcgtatc aatagttgca gtcatcgata aaccaatgcg
     7321 caaggggtgt tccatgagtt cttttggatc aagagaaact tcaaccggta cacgctgaac
     7381 gattttgatc cagttccctg tcgcattttg tgcaggtaat aaggagaacg cattgccggt
     7441 tcccatattg atccctgtca cccgaccatg aaacacaaca ttttcaccat aaagatcgct
     7501 gataatattg actgattgac caatccgtac atccgtgagt tgtgtttctt taaagttggc
     7561 attaacccac atttgacgtg ccggtacgac agccattaac gattgtccgg gactcactgt
     7621 ttcgccgacc tgaacacttc gctgggcaat atagccagta accggactcc ttatatccgt
     7681 acgtttaagc gccaaccagg cttctttggt tgcatccgcc gcttcaacga cttgtggctg
     7741 acggtttaat ggtgtgttca ttactaaagc tttattcgct ttataagcct ggatagcggc
     7801 attcagtgcc gctttgctac ttattaacgt atctttggta tgctccagcg tttcttttga
     7861 aataaccccc tgcttcgcta aaggcacacg acggttataa tcttctaaag attgttgata
     7921 ctgaatacgt gctgaagcga cttcggcact gtattgttta tcctgtaagt acagtttatt
     7981 cgtttgccga acaatatttg ccagattatt tttagcttta ttgagtgcga tagtggcatc
     8041 agttttatcc agtgaaacta aaatgtcacc ctgtcgaacg tagttcgtat ctgtatgatt
     8101 aactacagtg acactacctg agacttgtgc agaaattgga tctgcattcc ccgtgacata
     8161 ggcgtcatct gtactaatca tgtcttctaa ttccattgac caataggcat aggcacctga
     8221 aaacgcaata aataaaacta ttaccaataa agaaaagtat ttttttctgt tagactgttt
     8281 tttatttgaa ttaatctgtt ccactattat ctctcatttc gcatagatga aatttatgaa
     8341 ttgaatgaaa aaagcattca ttattcatat caaacacagt gcatgtgttg cacattatcc
     8401 caggaacgtt ggaggcctaa tttaaatgag gtgcaaaaaa aacaacagag gactaaaccg
     8461 tggcttttgc aatacaattc ttacgcctgt aggattagtg agaagactta tagtgctaac
     8521 ttgaaactat aaatcatcgg tataatccct gattttattg ttgacatttc atttatgccg
     8581 actatttata tggtatactt gtcgaattat cttaaaggaa gctcagattt tcttattttt
     8641 attgagaaaa tgagatgacg ccttatgtct gtattactac agggagaagg gagatgcttc
     8701 attgcaaagg gaataatcta tgaacgcaat aattattgat gaccatcctc ttgctatcgc
     8761 agcaattcgt aatttattga tcaaaaacga
//
LOCUS       DAJVTL010000155         8778 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.157, whole genome shotgun sequence.
ACCESSION   DAJVTL010000155 DAJVTL010000000
VERSION     DAJVTL010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8778
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.157"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(191..4603)
                     /locus_tag="OQQ26_003733"
                     /pseudo
     CDS             complement(191..4603)
                     /locus_tag="OQQ26_003733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308632.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR/RHS domain-containing protein"
     gene            complement(4623..5084)
                     /locus_tag="OQQ26_003734"
     CDS             complement(4623..5084)
                     /locus_tag="OQQ26_003734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DcrB-related protein"
                     /protein_id="HCS1859041.1"
                     /translation="MQFTFNEGHIQLPSQWQDQSMQVLVSTDNSGINLVITREAVPQG
                     TLTPELYQETLALYQGKLDGYTEHACREITLAEAPAWLLDYSWNGPEDEGNQGRISQI
                     AVFQRRGDTLLTFTFSTSLSLKNSQKTMLLEVIKSFTPLPPENDIQKDQPR"
     gene            complement(5112..6128)
                     /gene="tssI"
                     /locus_tag="OQQ26_003735"
                     /pseudo
     CDS             complement(5112..6128)
                     /gene="tssI"
                     /locus_tag="OQQ26_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308634.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein VgrG"
     gene            complement(6634..8091)
                     /gene="cusS"
                     /locus_tag="OQQ26_003736"
     CDS             complement(6634..8091)
                     /gene="cusS"
                     /locus_tag="OQQ26_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000253844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) sensor histidine kinase CusS"
                     /protein_id="HCS1859042.1"
                     /translation="MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFA
                     EQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSQGKTVYHSP
                     GAPDIREFTRDAIPDKDARGGEVYLLSGPTMMMPGHGHGHMEHSNWRMISLPVGPLVD
                     GKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSR
                     QIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTP
                     ITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKK
                     MLNLADEVGKVFDFFEALAEDRGVELRFVGDECQVAGDPLMLRRALSNLLSNALRYTP
                     PGEAIVVRCQTVDHQVQVTVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLA
                     IVKSIVVAHKGTVAVTSDARGTRFVIMLPERESDY"
     gene            complement(8081..8764)
                     /gene="cusR"
                     /locus_tag="OQQ26_003737"
     CDS             complement(8081..8764)
                     /gene="cusR"
                     /locus_tag="OQQ26_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper response regulator transcription factor
                     CusR"
                     /protein_id="HCS1859043.1"
                     /translation="MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGD
                     YDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKP
                     FAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLE
                     FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVG
                     YMLEVPDGQ"
BASE COUNT         1767 a         2584 c         2292 g         2135 t
ORIGIN      
        1 ctgccctagc atttggtggc aaatatttat ctgctttcct tattacttta attcctagct
       61 tctccatttc tttagcaata ttgtttattt gactacgtga taaacgaacc ccatccagga
      121 aacccgtatg cccactaaca cgacgaccat cgccaatata gtccatcaaa ctgctgattt
      181 tagaacttgc agccaatccc agcggatcaa cccacccaca aggatttggc acataccggt
      241 aagtctgctc ccctccctgc aaccccagcg gatcactcac caggtacatt ccggtttccg
      301 gctcgtaata ccggaaccgg ttatagcaca gccccgattc cacatcctgc cactgtcccg
      361 catacagcag gccggggtcg gcttccgggt ccagttcccc gcgcgggtcc gggtcgtctg
      421 tgtctgcggg caggctgagt gccagccccc acaggctggt ctgtcccggc cgccagacgg
      481 ttttaccttc actgttaaag ggcatcagcg ggcggcccgt caggtcgctc accgcatgat
      541 tcgtccgcgt cacccactgc gggaccacgg acggatgcgg ctgccgtacc cggctgcact
      601 gctggcttat cagctcaaag ccgttaaaca ccaggtgcct tacgctgtac agtttatcat
      661 cgtggtattc ccggatttcc gcaatactgt cgccgtccca caggtacgtg aagcggattt
      721 tcttccggtc gcagcgtttc tctgttcgtc tgccgctggc gtcgtggcgg tattcccact
      781 gctcaccctg tgcgctgcaa tacccggtca gctggtcccg gctgtcccac cggaaccgct
      841 ctgtttccgg gcggtagccg tcacggtgtt ttgtccggct gaccatccgg cctgcggcgt
      901 catagtcata ctgcgtgttt ccggcctgtt tcagccggtg gcctccggca tactggtcag
      961 tctcttcact tatccggtgc ctgcccgcag actgcgcctt caggtagccg cagctgtcat
     1021 agctatagga ctcatcgcct tcgccatagc ccagcccggt gcctgaggct gtcaccgccg
     1081 tgacctggcc gttccggtcc agccggtact cccggcgtgt ttcccgtccg taatcttccc
     1141 ggctggtgac gcctgacacg ttacccgcgc tgtcgtaacg gtactcccgc accagtgagg
     1201 ggagcagtcc gccccatgtg gcttcctccg ggaaaagtcc ggcgcgctgg ctggtaagct
     1261 gaccggctgc attccagccc tgctcacagg caaaaccccg gttactgtgc cggagcactt
     1321 cacgtcctgc ctcatcacgg ctgaacgtca gcgtctcatc ccccggcagg ataacctccg
     1381 tcagttctcc ggcggcgttg tagcggtacg tggttttcag cagggattca ccggggtgtc
     1441 tgtcgcgttc atcttccggc ggcaggatac agcggatgac ggtgtgttcg tcggggtagt
     1501 ggtattcaat ggcccgtcgg ccctgagtgg tgacattcac ccgcccgcgt tcgtcatagc
     1561 cggtgcgctg tgatatgccg tccgggctga agatgcccat cagcctgccg gatttgtcat
     1621 acgcatactg cgttttgcct tccggcgtga tgatttctgc caggcggcct gcggcgtccc
     1681 ggctgtagag gatagtttcc tctaggccgt tgaccctggc ggtacacagg ccatcggcgt
     1741 catagcggta acgccagacc acgccgcccc agtcacgctc ttccgtcacc tggccacagt
     1801 tgtccagaat ataaaggtat gattcaccct gcgggttgat gacttctgtc agttgcagcg
     1861 tgtctttatc gtagcggtac tgccagcggt ggccttcacc gtccgttcgc gccaccggca
     1921 aatcgaacgg gccgtattcc atcgtccaga caacgccgtt accgtccgtc caggccagca
     1981 ggttgccgtg gcggtcatag cggaatcctt ccgcgccggt gccagtgcgc tcaaggccgc
     2041 tcagtttatg gtgctgctgc cactgcaacc gcactgactg accgccgggg ccgcgcatct
     2101 tcactggcag gtcgtgaccg ctgtattcgg tgtggtgttc acggcccatc acgtcggtga
     2161 gtgtttccgg ccggttgtgg tggtcgtact ctatgcccag acgccgttca tcctggcgga
     2221 atatccccga cagcagcccc tgagcggtgt atgccagccg ggtctcttcg ccctgtggcg
     2281 acaccagact taccggcagg ccgcgttcat cacactgctg tgtccacgtc tgcccggctg
     2341 ggtcggtgat gttgctgagc aggccgcgct catcatagcg gtacagccac tccgcgccgt
     2401 ctgccgccgt gtaacggctt aactgaccgt gtgcggcgtt gtattcaaat ttctccaccc
     2461 gcccggcagg ggagtgacgg gccagcaggt gatggaattc atcccattca tacgtggtgg
     2521 tactgccgtc cggcgcgtct tcccgcagaa tattgccgtc aggatcatag taataacggt
     2581 gagtgccctt gccgtccgtc agggtggtgc agccgtcacc atagtccagc gtggcgttgt
     2641 aatagccctc cgccctggtg acggtcacgc accggccctg ttcatcgtag gtgaaacggc
     2701 tccacgtctg gtcgttatcg gaccagcgga tgatccggtc cgcagcgtcg tactcataaa
     2761 acaggtggta gtccagccgc gcatccgctt cggtcagccg cccccgcgca tcctgttcgt
     2821 aggtcgccag cgtctgtatg ccgttatccg tgcggtgaat ggctttcagg tagccgctgg
     2881 cgtggtacgt cagtttaagc cggatcccgt cggtgtgact gacacctgtg atccggtact
     2941 ggctgtcgcg ctcaaacgtg atgcggttgc tggcggtgtc gctcatcccg cccagcatgt
     3001 acatccggtc attggggctg tgtgccaggc ggtcatcgct ggtatcgtca gtcaccgggt
     3061 ggcgcagacg cattcccgga aaggcgtcat aaaagaagcg gctgctcagt gcatccctgt
     3121 cgaacagctc cagataatca tcgcggcggc gcagaatgta ctgggcgtga tacgggttaa
     3181 ccgccgtatc actgtcaccg tcgaaggcaa atctcagcgt ggctccctgg ctgatgatat
     3241 ccacccggtt tccctgttca cgcacccagg cgtattcgct ccaggagtct ctccagccca
     3301 cgccggtcag gccatgcagc ggcagtacag aactgtggaa acgggtgaag gagaggggga
     3361 gggtctggcc cagggtgaag tcggtacgtt cgtcgcagta tgcgccggtt accggatcga
     3421 caggatctgt tacccatctg atgactttat tggcaatact ttttaacgac ttacctgttt
     3481 tccccagcaa cgcgccgagc tttgcgccca gcagcttccc gcttttcccc agcaggtttc
     3541 ccagtttgcc gagtctcgcc agattcttca gttttcccag cagtcccgct ggcggcagaa
     3601 gatagctggc tattgttatt ccccccagga tcattctctg ccacggcggg aactccggct
     3661 ggatatccag atatgtgacc tgctcaccgc caataaagac gtccggcgaa cctcccacga
     3721 tcgccgcact gcactccagt ttgtcgccct tgcgcgcggc aggctgattg ttgataaaga
     3781 cgttgctgct gccctgggct atcctcggtg gtttgttctc cttgtcacag agcgccgtgt
     3841 cctcaccggc ttccgggaaa tccacatctt ttttgatttc gccacgcccg cccaccatgg
     3901 tggcaaactc cattaatacc ggaccggcgg gaaacagaag cgatgcgccg gcgctgacgc
     3961 gatccataaa accggcattg ctgtccgtca gggtgataac agcgttcccc caggccttcg
     4021 ccagtggtac tgctttttcc gctgccgatt caagcaggtc agtggcaata tcaccccatg
     4081 agggttcccc ctgtgggact tcaggtattg ctccaggtgg gggaggaggg ggaagggtga
     4141 ccgctgcacg tgcggccagc tcgccgttaa tttttacgtt ttcagaaccg gtattgatgg
     4201 cgccgtccgt gtcacaaaag ctgtttatcc atgattcaag ctggttctgt ttctcctcca
     4261 cataatcact cgccttatag ctggcataca tcagcgcagg caccagaacc agcgcataag
     4321 ggccggtggc acaggcggcc ataatcaggc aaccttctgc gatggtcact atcgccccca
     4381 gtacggcccc tgccagcgcc cccaaaaaac tcttgtgctg aatttcatcg cccagcctgg
     4441 cggcgggggg gccagacttt tttgatgcca acatctgtgc aatggctttg tcgttggctg
     4501 cccgtttcat ctggctggcg accatcgcct gctgtgacag cattcgcatt gccagcgtac
     4561 cgcctgcggt cgctccctgt ggcccgcctg gtccttcact catgtgttat ccctcgttta
     4621 tgtcagcgcg gctggtcctt ttggatgtca ttctccggtg gcaacggggt gaagctcttt
     4681 atcacctcca gcagcatcgt cttttgactg ttcttcaggg ataaggaggt gctgaaagtg
     4741 aaggtcagca gcgtatctcc acgccgctgg aatacggcta tctggctaat ccgcccctga
     4801 ttcccctcat cttccggacc gttccaggaa taatccagca gccaggccgg ggcctctgcc
     4861 agagtgattt cccggcaggc atgttcggtg tacccatcaa gtttgccctg gtacagcgcc
     4921 agcgtttcct ggtacagctc tggtgtcagg gttccctgtg gaacggcttc gcgggtaatg
     4981 accaggttga tgccactgtt atctgtggac accaggacct gcattgactg atcctgccat
     5041 tgagacggca gttgaatgtg gccttcatta aaagtgaact gcataaaata ctccctgata
     5101 atctgagtga atcagttgat gaaaacagaa ccgcccacga tggtgatgcc atccttcgac
     5161 agcctgatta ccgtcgattc cccgacctgt agctgaatgc catccggcgt cagcgcaatt
     5221 ttgctttcct ccacggccag caaaatttcc ttaatcgccg tataagcctg tataccgtcg
     5281 ccttcgccac cattgtttac agcgtcaaca tgcaccgaac cggcaatcgt gcctctgtcc
     5341 tgaaagacat cctcagataa agaccctttc agtactccgg tgatcttgtg gcctttttcc
     5401 accgtaagaa ggcggttacc ttcctggatc gtgaccgtct ggtcattttt tacggtttcg
     5461 cggtgatcgt gttttacggt ggtggtacgg tcgttgagca cttcggtatc catgttcttc
     5521 tgcgcgtgga tgtagacttg ttctctccct gtcgcatcat caaacttcag ctcattaaat
     5581 ccgctgccca tgtacgtttt ggagcggatg gtcatctgcg tctttgttcc cggcaggctg
     5641 ccgggggtgc ggttttcctg gtggtaggtg cgccccataa tgatcggctg gtccggatcg
     5701 ccgttgagga agtctacaat cacctcctga cccacacgcg gtatcgccag gtggccaaaa
     5761 ccggtgcctg cccacgcctg tgccacacgg atccagcacg aactgtcttg gtctgccggg
     5821 ttataacggt cccagttgaa cttcacccgc acgcgaccat gttcgtcgca gaagatttcc
     5881 tcgcctgccg gtcctgtcac gacagcgctc tgcgggccgt cgaccagcgg tttcagcaac
     5941 ggctgtggtc gccatgttct gtctgccggg atcaccgcaa aatggttctc cagcgccgtc
     6001 cccgctccct gccgtcctgg caccgcctgt ggctgttcgc cgtgcagttc acttgccacc
     6061 acctgccatt cccggttcag gttcgcctgc ggatgccccg tcagcacaat tcgtcgtccc
     6121 ggccatatca caacgagtaa caaaaacgca aagttaaacc aatattcata atatattttt
     6181 attcacagca ataaataatc caattaacat tattaaaatg aatgattgca taagaaatat
     6241 atgctgccgc tccaccctga taacatgatc tgcacattgc acatcttaac gttgttaaat
     6301 actggctcaa tagtggatat tttaaattag gaatttatca aattcacttg ataaatagat
     6361 tgagtgaata atataacaat taatgatgat taatcgcgat taaattattc attgctttat
     6421 atgatagatg gcttgtttat aacgatgaaa atttagaaag ggcattgtga tctacaattg
     6481 gaagaaacac agatttaact aagtttcata tacaaacatc tcgtgaaact ttgaaaaata
     6541 aaagccttcg atatttcata tgtttaataa gtttttctct aatttgttga tcaacaatac
     6601 caggaggtga tgcaccacgc cctgaatttg aacttaataa tcactctctc tctccggcag
     6661 cataatcaca aaccttgtcc cccgcgcatc tgacgttact gcaaccgtgc ctttatgcgc
     6721 gacaacaatc gatttcacta tcgccagtcc aatgccgcta ccttcgcctt ttcgctggcg
     6781 ggaagggtca acgcggtaga aacggtcaaa caatcgcggt aagtgctcgg gcgcaatggg
     6841 cgtaccgggg ttttcgacgg taacttgcac ctggtgatcg accgtctggc agcgcactac
     6901 aattgcctct ccgggcggcg tataacgcag ggcattagaa agcaggttgc ttaacgcccg
     6961 acgcagcatc agcggatcgc ccgcaacctg acattcgtcg ccaacaaatc gcaactccac
     7021 gccgcgatct tccgctaacg cctcgaaaaa atcgaacact ttgccgactt catccgccag
     7081 gttgagcatt ttcttttcgg ggattagctg gttgttatcg gcctgagcga gaaacagcat
     7141 atcgctgacc attttcgcca ttcgcgtcag ctcttcgaga ttagagtaga gcacatcttc
     7201 cagctccttc tggctgcgag actggctgag ggcgatttcc gtttgcgtga tgagattggt
     7261 aatcggcgtg cgaatttcgt gagcgatatc cgctgagaaa ttggactggc gggtaaagac
     7321 atcctcaata cgctcgatca tatggttgaa cgacagtacc agctgttcca gctcaatggg
     7381 cacggtctgc gggtcgaggc gaacgtcgag atctttcgag gtgatattct ggatttgacg
     7441 gctgacgctg cggatcggcg cgtgaccttt atgtaccgcc aacagcacga taaagacgat
     7501 caggatgctg attaccgatg cggtcataat aagtttattc atcaaatcat ttatgtaatg
     7561 aagatgaaaa tcgatagaaa gcgcgatgta gagcgtataa atcggtttgc cgtcaaccag
     7621 tgggccaact ggcaaactga tcatccgcca gttgctgtgt tccatatgcc cgtgaccgtg
     7681 gcctggcatc atcatcgtcg ggccggaaag gagatacacc tcaccgcccc gcgcgtcttt
     7741 atcgggtatg gcgtcacgcg taaactcgcg gatatccggc gcaccggggg agtgatacac
     7801 cgttttaccc tgactatctg ccagggaaat caacacattg gaataaccac tgacgatatc
     7861 ttccagcgtc attaagcgtc gggcttgcgt ttcgtcaggg tgatttagta cccgttcaag
     7921 ggtggcgcta atctctttta aatcattaat atcctgctcg gcaaaatgca cttttactga
     7981 gtggatcatg atccatgcaa aggcgaaaaa cgccgcgatg gtggccaggc tgataaaaaa
     8041 ggtcaggcgg gttgccagcg aaaacgggcg ctgaaatggc ttactgacca tccggcacct
     8101 caagcatgta acccacgccg cgcacggttt gaatcagctt cggctcaaag tcgttgtcga
     8161 ttttgccgcg tagccgcttc accgccacat caatggcgtt agtgtcgctg tcgaaattca
     8221 tgtcccatac ctgcgaggcg ataagcgagc ggggcagcac ttcgccctga tggcgaagga
     8281 aaaactccag cagagtaaat tctttactgg tcagagtgat gcgcgtgccg ctgcgggtga
     8341 ctttgcggct gacgagatcg accatcaggt cggcaacctg aaactgactt tcgataatta
     8401 ccgccgcccc gcgccgcagg agagtgcgca cccgcgccag cagttcagca aaagcgaatg
     8461 gtttcaccag gtagtcatct gcccccaatt ccagcccctt gacgcgatgt tcaatggtgc
     8521 caagcgcggt aagcaacaga atcggcatcc ctttattggc ggaacgcaac atgcgcacga
     8581 tatcccagcc gttcacgtcc ggcagcataa tatcgaggat tatcagatca taatcaccgg
     8641 tcatcgccag atggtagcca ttcaacccgt tgtcggccaa atcgaccaca aaaccggctt
     8701 cggttaaccc tttggtcaag tattctccgg ttttcttttc atcttcgaca atcaacagtt
     8761 tcatatttcc tccgcatg
//
LOCUS       DAJVTL010000156         8600 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.158, whole genome shotgun sequence.
ACCESSION   DAJVTL010000156 DAJVTL010000000
VERSION     DAJVTL010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8600
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.158"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            193..690
                     /gene="ubiC"
                     /locus_tag="OQQ26_003738"
     CDS             193..690
                     /gene="ubiC"
                     /locus_tag="OQQ26_003738"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709881.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HCS1859044.1"
                     /translation="MSHPALTQLRALRYFKEIPALEPQLLDWLLLEDSMTKRFEQQGK
                     TVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPASTLSG
                     PELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            703..1575
                     /gene="ubiA"
                     /locus_tag="OQQ26_003739"
     CDS             703..1575
                     /gene="ubiA"
                     /locus_tag="OQQ26_003739"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HCS1859045.1"
                     /translation="MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVV
                     LVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIL
                     QIGVLALMAIIGELHGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(1730..4153)
                     /gene="plsB"
                     /locus_tag="OQQ26_003740"
     CDS             complement(1730..4153)
                     /gene="plsB"
                     /locus_tag="OQQ26_003740"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HCS1859046.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESI
                     KLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG
                     RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDST
                     VPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMA
                     AIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQ
                     DDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLT
                     IESATQGEG"
     gene            4324..4692
                     /gene="dgkA"
                     /locus_tag="OQQ26_003741"
     CDS             4324..4692
                     /gene="dgkA"
                     /locus_tag="OQQ26_003741"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HCS1859047.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVV
                     IACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LIAIIVAVITWCILLWSHFG"
     gene            4802..5410
                     /gene="lexA"
                     /locus_tag="OQQ26_003742"
     CDS             4802..5410
                     /gene="lexA"
                     /locus_tag="OQQ26_003742"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HCS1859048.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVAP
                     SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
                     QGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL"
     gene            5483..6808
                     /gene="dinF"
                     /locus_tag="OQQ26_003743"
     CDS             5483..6808
                     /gene="dinF"
                     /locus_tag="OQQ26_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HCS1859049.1"
                     /translation="MAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSPVY
                     LGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGAL
                     IALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARA
                     PVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGI
                     SGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTL
                     LTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGE
                     HIIALLTSLTQIQELADRYLIWQVILPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAA
                     GFALTLLTLPWLGNHGLWLALTVFLALRGLSLAAIWRRHWRNGTWFAAT"
     gene            6924..7133
                     /locus_tag="OQQ26_003744"
     CDS             6924..7133
                     /locus_tag="OQQ26_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HCS1859050.1"
                     /translation="MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNEYRW"
     gene            complement(7175..7690)
                     /gene="zur"
                     /locus_tag="OQQ26_003745"
     CDS             complement(7175..7690)
                     /gene="zur"
                     /locus_tag="OQQ26_003745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HCS1859051.1"
                     /translation="MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISA
                     YDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFI
                     CDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQH
                     DHSVQVKKKPR"
     gene            8001..>8600
                     /locus_tag="OQQ26_003746"
     CDS             8001..>8600
                     /locus_tag="OQQ26_003746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HCS1859052.1"
                     /translation="MLKIIPGATGYFNKTLNSNQFDNEDAIKGKVNSIYGKSIDYSAM
                     RHRDIIIAKIDLFIQRITHNLWTAREKNVTLIKKINDLKMCVNEYIGDCTDEELNDRE
                     FIASVVDRAIFHFAINSICNPEDNKDAILIERCTFDVETKNGLPSTVQLFYEESKDNE
                     PLANIHLQAIGSGFLTFVNACQEYDDNSLKLFASLLISLS"
BASE COUNT         2011 a         2035 c         2320 g         2234 t
ORIGIN      
        1 ctgggcggtg atgcacctat ggttgctctc gccagcgcgg gcatcggcaa agcgtaaagt
       61 tcaacagcga tttaccactt catgcgattg ttgcgttttt gttgcgcatt agatcactta
      121 atttgcttta catctcccgt aaacactttt ctgcgataca atgcctttac gttatgtaac
      181 ggagagttcg gcatgtcaca ccctgcgtta acgcaactgc gtgcgctgcg ctattttaaa
      241 gagatccctg ccctggaacc gcaactgctc gactggctgt tgctggaaga ttccatgaca
      301 aaacgttttg aacagcaggg aaaaacggta agcgtgacga tgatccgcga ggggtttgtc
      361 gagcagaatg aaatccccga agaactgccg ctgctgccga aagagtctcg ttactggtta
      421 cgtgaaattt tgttatgtgc cgatggtgaa ccgtggcttg ccggtcgtac cgtcgttcct
      481 gcgtcaacgt taagcgggcc ggaactggcg ttacaaaaat tgggtaaaac gccgttagga
      541 cgctatctgt tcacatcatc gacactaacc cgggatttta tcgagatagg ccgtgatgcc
      601 ggactgtggg ggcgacgttc ccgcctgcga ttaagcggta aaccgctgtt gctaacagaa
      661 ctgtttttac cggcgtcacc gttgtactaa gaggaaaaaa atatggagtg gagtctgacg
      721 cagaataagc tgctggcgtt tcatcgctta atgcgtacgg ataagccaat tggcgcgtta
      781 ctgctgctct ggccaacatt atgggcgttg tgggtggcga caccgggcgt tccccagctc
      841 tggatcctgg cggtgtttgt cgcgggtgtc tggctgatgc gcgctgctgg ttgtgtggtg
      901 aatgattatg ctgaccgcaa gtttgatggt catgttaagc gcacggcgaa ccgaccactt
      961 cccagcggcg cggtaacaga gaaagaggcg cgcgcgctgt ttgtagtgct ggtactgatt
     1021 tcgtttttac tagtactgac gctgaatacg atgaccattc tgttgtcgat tgccgctctg
     1081 gcgttggcgt gggtgtaccc gtttatgaag cggtataccc atctcccgca agtggtgctg
     1141 ggcgcggcgt ttggctggtc gattccaatg gcttttgccg ctgtgagtga gtcggtgcca
     1201 ttgagttgct ggttaatgtt cctcgccaat attctctggg cggtggctta cgacacgcag
     1261 tatgcgatgg ttgaccgtga cgatgatgtg aagattggta ttaaatccac cgcaatcctg
     1321 ttcggccaat acgataaatt gattattggt attttgcaga ttggcgtact ggcgctgatg
     1381 gcgattatcg gtgagttaca tggcttaggc tggggatatt actggtcaat tctggtggct
     1441 ggcgcgctgt ttgtttatca acaaaaactg attgccaacc gcgagcgtga agcctgcttt
     1501 aaagcattta tgaataataa ctatgttggt ctggtactgt ttttaggact ggcaatgagt
     1561 tactggcatt tctgatgatg taaaaaagcc ggatgatcat ccggctttct tctgggttgc
     1621 ctgatgcgct gcgcttctca ggcctacaca acagatcgca atttattgaa tttgcagatt
     1681 atggaaggcc ggataagacg ttttcgccgc atccggcaat tctctctgat tacccttcgc
     1741 cctgcgtcgc actctcaatc gtcaaacgca cgtcggatgt aatcaactcc gccagcaact
     1801 gataaacctt catcgtttct gccggttctg cgtcgccgct atcgctgata tacccttcat
     1861 cacgcagtgt cagcaccaga gaactgaaca ccgccttgtc gaagaactcc ggcgcgttga
     1921 tgccatgcag cacggagaga cgttgcgcga cggtgcggct ctctttctcc agcgtaccgc
     1981 ggttgatcga cgggttggca ctcaacaacc agaaggtgat ggcataacgt tgcagcgttt
     2041 cgcgcgcgcc tgcggccagc agctgtaggg tgcgagaatg cgccgggttg atatgcaact
     2101 catcatcttg cagggtaatc agcccctgac gttgcatctc atttgccagc gcatcaataa
     2161 cgtccggcaa ctcgtcgcga tcccagcgca ggaacagctc cgctttcagc attgggtaaa
     2221 gcacattgac gtgctccatc aatacgtcgc gggagatgtg gcgatgctgg gtgacaattg
     2281 ccgccatcag cgaaggcagc accaacatat gcgcaatgtt gttgcgatag taggtcatca
     2341 gcaccgcttg ctcgcgcggc agaatgatga tgtcgccgat agtgtctttc tcgacttcaa
     2401 acttgttcat ttgcagcgcg tgatcgataa gctcgctggc gctggctgaa ggaacggtag
     2461 agtccgtgga gtagggcacg ttgcgcatca gatccaggta gcagttgagt tgctcggtta
     2521 actgctcgcg ggtgagtgag cgctgacgtg atgccagtag cgcagtacag cacaggttca
     2581 tggcgtttgc cgcgcctgcg ttgttaatgc gtaccatcag gtcggcagca atattattga
     2641 ccgtcggcgt taaccaggcc ggacgcaccg cttcgatggg atcgatagat tcacgccagt
     2701 ctggtacgtg ctggttaagg taggtcatca acggcattgg ttcaccgaag ttgacgtaac
     2761 cctgaccgag attacgcagc ttgcttaaac cgcgcagcat ctgcggcagg ctctctttct
     2821 ctttcgtcgc gccgcgcagt tctttggcgt aagtacccac ttccatgacg tgctcataac
     2881 caatgtagat cggaatcagc gtaatcggac gcgtgccgcc acgcagcatc gcctgaatgg
     2941 tcatcgacag cgtaccagtt ttcggatcca gcaaacgccc cgtacgggaa cgaccgcctt
     3001 ccacgaagta ctcgacggaa taaccacggc tgaacagttc gccgagatac tcccggaaaa
     3061 cggtggaata gagcttattg cctttaaacg tacggcgaat aaagaatgcc cccagacggc
     3121 ggaaaatcgg tccggcaggc cagaaattca ggttgatccc ggcggcgata tgcggcggca
     3181 ccagcccctg gtgatacagc acgtaagaaa gcagcaggta gtccatgtga ctgcggtggc
     3241 aaggcacata taccagctca tgaccgtcgt gggccagctg gcgaacgcgc tcagcgttat
     3301 ggacgttgat gccctggtaa aggcggttcc aggtgaagcc cagaatacgg tcagtcaggc
     3361 gaatcatctc gtaagagaaa ttcgccgcaa tctcttccat cagcgcaatc gcgttctgct
     3421 gtgctttttc atgggagatt tttttgctgc gcgcttcatc ttctaccgct ttggcaatgg
     3481 cgcgggaggc gagcagctta ttaaacagat cctgacgagc aggcagacgt gggcccacag
     3541 cagccagacg ttgacgggca aagtgcatac gcgccacgcg cgccaatttc tgagcgatag
     3601 ttttatctgt gccgtgttca tcggccatgc ggcgcagaga aactgacggc gagaaacgca
     3661 caaaactgtc gcgaccgagc cacagtacgg cgaaaaattt ctgtacgccg ttaagcatac
     3721 gcagcggcgg gtttacttca cctttttcac gccccggcgc gcgaccaaac atcaccgata
     3781 ctggcaccat ctgcacatcc agatttgggt tgctacggtg caaatcgaga tagtcgtgga
     3841 acagcttaat agactcttct ttcggcgtgt aataggtgaa tacacgcggc ccgccgtgaa
     3901 tgaacacata gcgcggcagt agcgtgccgt cgatttccag cggctctaac gggtcaggca
     3961 agtcatgagc cagacactgg gcgcgtaacg tcagcaaatc tgctttcgag ttgtacggta
     4021 aaacgtacat aattggacga gaggtatcca gccccagttc cggggcagga tctgccggaa
     4081 tagacttgct ttttaccagg atgcttaatg gtaaattcag taatttgtag taaattcgtg
     4141 gccagccgga cataaacgat gtaaagcctc tggttaataa tgcaaatgcg cggcaaggat
     4201 agcagaaagt catgggaaat tctgtggtat ccgctcatgt ttcgcgcggc gttacgcaaa
     4261 cccgaatcat cggatttaac ggtacactga tattgacgct cataatgtaa aaaggttctt
     4321 tcaatggcca ataataccac tggattcacc cgaattatca aagctgctgg ctattcctgg
     4381 aaaggtttac gcgctgcatg gatcaacgaa gcggcattcc gtcaggaagg cgtagcggta
     4441 ttgttggcgg tggtcatcgc ctgctggctg gatgtggacg caattacccg cgtgctgctt
     4501 atcagctccg tgatgctggt gatgattgtg gaaattctca atagcgccat cgaagcagtg
     4561 gttgaccgaa ttggctctga ataccatgag ctttccggac gcgctaaaga tatgggatcc
     4621 gccgcggtgc tgattgcgat tatcgtcgcc gtgataacct ggtgcatcct gttatggtcg
     4681 cattttggat aacccttcca gatttcgata aatctctggt ttattgtgca gtttatggtt
     4741 ccaaaatcgc cttttgctgt atatactcac agcataactg tatatacacc cagggggcgg
     4801 aatgaaagcg ttaacggcca ggcaacaaga ggtgtttgat ctcatccgtg atcacatcag
     4861 ccagacaggt atgccgccga cgcgtgcgga aatcgcgcag cgtttggggt tccgttcccc
     4921 aaacgcggct gaagaacatc tgaaggcgct ggcacgcaaa ggcgttattg aaattgtttc
     4981 cggcgcatca cgcgggattc gtctgttgca ggaagaggaa gaagggttgc cgctggtagg
     5041 tcgtgtggct gccggtgaac cgcttctggc gcagcagcat attgaaggtc attatcaggt
     5101 cgctccttcc ttgttcaagc cgaatgctga tttcctgctg cgcgtcagcg ggatgtcgat
     5161 gaaagatatc ggcattatgg atggtgactt gctggcagtg cataaaactc aggatgtacg
     5221 taacggtcag gtcgttgtcg cacgtattga tgacgaagtt accgttaagc gcctgaaaaa
     5281 acagggcaat aaagtcgaac tgttgccaga aaatagcgag tttaaaccaa ttgtcgttga
     5341 ccttcgtcag cagagcttca ccattgaagg gctggcggtt ggggttattc gcaacggcga
     5401 ttggctgtaa catatctctg agaccgcgat gccgccaggc gtcgcggttt gtttttcatc
     5461 tctcttcatc aggcttgtct gcatggcatt cctcacttca tctgataaag cactctggca
     5521 tctcgcctta cccatgattt tctccaatat caccgttccg ttgctgggac tggtcgatac
     5581 ggcggtaatt ggtcatcttg atagcccggt ttatttgggc ggcgtggcgg ttggtgcaac
     5641 ggcgaccagc tttctcttta tgctgttgct gtttttacgc atgagcacca ccgggctgac
     5701 tgcgcaggct tatggtgcca aaaatcctca ggcattagcc cgtgcgctgg tgcaaccgtt
     5761 gctgttggcg ttgggggctg gggcgttaat tgcgctgctg cgtacaccga ttatcgatct
     5821 ggctctgcat attgttggcg gtagtgaagc agtcctggaa caggcgcggc gctttcttga
     5881 aatccgctgg ttaagcgcac cggcgtcgct ggcgaatctg gtattactcg gttggttact
     5941 cggcgtgcaa tatgcccgtg cgccagtaat tttgttagtg gtcggcaata tcctcaacat
     6001 tgtgctggat gtctggctag tgatggggct gcatatgaac gtgcagggcg cggctctggc
     6061 gacggttatt gcggaatatg caacattgct gattggtctg ctaatggtgc gtaaaatcct
     6121 caaactacgc ggaatttccg gcgaaatgct gaaaactgcc tggcgaggaa acttccgtcg
     6181 cttgctggcg cttaaccgcg atatcatgct gcgttcgctg ttgttgcaac tctgtttcgg
     6241 cgcgatcacc gtacttggcg cgcgactggg gagtgacatt atcgctgtta acgcggttct
     6301 gatgacgcta ctcaccttta ccgcctatgc gctggatggt tttgcctacg cggttgaagc
     6361 acattccggt caggcatacg gtgcgcgcga cggtagccag ttgctggatg tctggcgggc
     6421 agcgtgccgc cagtcgggga tcgtagcgct actgttttcg gtggtttatt tgctggcagg
     6481 ggaacacatc attgcgttac tgacgtcgtt aacccagatt caggagctgg ccgaccgcta
     6541 tcttatctgg caggtgattt tgccgttggt tggcgtctgg tgttatctgc tggacggcat
     6601 gtttataggc gcaacgcgtg ccgccgaaat gcgtaacagt atggcggtgg ccgccgcagg
     6661 ttttgcgctg acgctcctta cgctgccgtg gctggggaat catggtttgt ggctggcatt
     6721 aaccgtcttt ctggcgttgc gcgggctttc tctggcggct atctggcggc gtcactggcg
     6781 caacggtacc tggtttgctg caacgtgacg gttaaaaatt ctgaataaat tatcctaagc
     6841 caaattgctg actacactta atctcacgtt cagaagaaaa gtgaacgtac tctcattcac
     6901 aacctaacga tgaggtcttg attatgaata aagatgaagc cggcggtaac tggaaacagt
     6961 ttaaaggtaa agtgaaagag caatggggca aactgaccga tgatgatatg acgatcattg
     7021 aaggtaaacg tgatcaactg gtcggtaaaa tccaggaacg ttatggttat cagaaagatc
     7081 aggcagaaaa agaggtcgtg gattgggaaa cccgcaatga atatcgctgg taattaatcc
     7141 ctcctgcccg acgtgtacaa ggatgtacgc cctcttaacg cggtttcttt ttcacctgca
     7201 cagagtgatc atgctggcac tgttcaggat gacgacacgc ttccacttcc acgcatgccg
     7261 cacagagccc atgtgcttcg atcacattat gccgcagggc aaaccccatt tttgccgcca
     7321 gcgtatgcat gatgtcttcc acgccttcag cacattcttc tttcaccgcg ccgcagcgat
     7381 cgcaaataaa catggctgac gtatgcgtgg gctggtcgaa cagatgacag agcacataac
     7441 tgttggtgga ttccacctta tgcacaaaac cttgctcaag cagaaaatcc agcgcgcgat
     7501 aaaccgttgg cggcttggct tgcggttcag cttcgcgcag taaatcaagc agatcataag
     7561 cgctgatagc gccatcctgc agactcatca ggcgcaacac ttccaggcgc tgtggggtca
     7621 ggcgcacatt acgctgcgcg cagatttttt cagcctgcgc taataactcc tgcgttgtgg
     7681 tcttttccat cgggcacctc aaagtggggg ttaagaatgt ccttacttta ccatgttcca
     7741 ggaaaaacac cgagaaccct tattgttgcc gtaatgttga ttttctgttt tgtaggtaag
     7801 gtgttgtgtt gcctggccgt accattatca acacgataat aattcatttt taaatgaatt
     7861 gctttaagtt aactcactat ttatttaact gggtttaaac gcatacctgt agttcagaaa
     7921 ttatgagcga tttttgatag tgaccagatg gcaaaagaat tataaggagg acacggtacg
     7981 acaaaaaagg tagatgaatc atgttgaaga taatacccgg tgcaactgga tactttaata
     8041 aaacactcaa ttcaaatcaa ttcgataatg aagatgcaat caaaggtaaa gtaaatagta
     8101 tatatggtaa atctattgat tattcagcga tgcgtcatcg ggatataatt attgcaaaaa
     8161 tagatttgtt tattcaaaga atcactcata atttatggac tgcacgtgaa aaaaatgtga
     8221 cgttaattaa gaaaataaat gatctcaaaa tgtgtgtcaa tgagtatatt ggagattgta
     8281 ctgatgagga gttaaacgat cgtgaattta ttgcatcagt tgttgacagg gctatttttc
     8341 atttcgcaat taatagtata tgtaatcccg aggataataa agatgcgata ctcatagaac
     8401 gatgtacttt tgatgtagaa accaagaatg gtcttccctc cacggttcag ctattttatg
     8461 aggaatctaa agataatgaa cctttagcga atatacattt gcaagcaata ggttctggtt
     8521 tcttaacgtt tgttaatgca tgtcaggaat atgatgacaa cagcttaaag ttattcgctt
     8581 cgctgttaat ttcactttca
//
LOCUS       DAJVTL010000157         8565 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.159, whole genome shotgun sequence.
ACCESSION   DAJVTL010000157 DAJVTL010000000
VERSION     DAJVTL010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8565
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.159"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            49..933
                     /locus_tag="OQQ26_003747"
     CDS             49..933
                     /locus_tag="OQQ26_003747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HCS1859053.1"
                     /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
                     AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
                     WTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETT
                     SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
                     VINDEALNRIIAVGHQHHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVETAYASETQK
                     VTKEKPAHLAQSIRVAKR"
     gene            complement(984..1838)
                     /gene="yeaE"
                     /locus_tag="OQQ26_003748"
     CDS             complement(984..1838)
                     /gene="yeaE"
                     /locus_tag="OQQ26_003748"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal reductase YeaE"
                     /protein_id="HCS1859054.1"
                     /translation="MQQKMIQFSGDVSLPAIGQGTWYMGGDASQRKTEVAALRAGIEL
                     GLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRL
                     NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQ
                     CATNQVLYHLGSRGIEYDLLPWCQQQHMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA
                     HNISAAQVLLAWVISHHGVMAIPKAATIAHVQQNAAALEVELSSAELAMLDKAYPAPK
                     GKTALDMV"
     gene            complement(1928..2674)
                     /gene="mipA"
                     /locus_tag="OQQ26_003749"
     CDS             complement(1928..2674)
                     /gene="mipA"
                     /locus_tag="OQQ26_003749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="scaffolding protein MipA"
                     /protein_id="HCS1859055.1"
                     /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
                     DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
                     DDRKSTMMAGLSYVHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
                     GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
                     YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
     gene            3110..5044
                     /gene="yeaG"
                     /locus_tag="OQQ26_003750"
     CDS             3110..5044
                     /gene="yeaG"
                     /locus_tag="OQQ26_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
                     /protein_id="HCS1859056.1"
                     /translation="MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLM
                     AIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK
                     KQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQI
                     LEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDEN
                     NQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLL
                     TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR
                     ISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPEKSSIYSKMRVYDGES
                     LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL
                     EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT
                     YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN
                     NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG
                     YTRKQVRLLCEWYLRVRKSS"
     gene            5157..6440
                     /locus_tag="OQQ26_003751"
     CDS             5157..6440
                     /locus_tag="OQQ26_003751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HCS1859057.1"
                     /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVT
                     DVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ
                     GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTGYKTHRAGYTANGV
                     PANISVVRSLQNSLARRTAMTAGKRRELHALEENVAIISNSEPAQLLEEERLRKEIAE
                     LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL
                     YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP
                     AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL
                     QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKD"
     gene            6587..8062
                     /locus_tag="OQQ26_003752"
     CDS             6587..8062
                     /locus_tag="OQQ26_003752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HCS1859058.1"
                     /translation="MIQSTRISMGLFFKYFLSLTKIDLGQNYISLPSIKSSTHIALLF
                     MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNA
                     VIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVS
                     IFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYN
                     ADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLA
                     SLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLT
                     NIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQ
                     QSIRPDDILARLEGEVFGLLFTELNSAQAKIIAEHMRKNVELLTGFSNRYDVPEQMTI
                     SIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI"
     gene            8243..>8565
                     /locus_tag="OQQ26_003753"
     CDS             8243..>8565
                     /locus_tag="OQQ26_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1859059.1"
                     /translation="MKLHHRMLRHFIAASVIVLTYSFLIFELVASDRAMSAYLRYIVQ
                     KADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHK
                     YPGLRG"
BASE COUNT         2249 a         2064 c         1984 g         2268 t
ORIGIN      
        1 cggtcgctct tttttttacc tgataaaatg aagttaaagg actgcgtcat gattaagaaa
       61 atttttgccc ttccggtcat cgaacaaatc tcccctgtcc tctcccgtcg taaactggat
      121 gaactggacc tcattgtggt cgatcatccc caggtaaaag cctcttttgc attacagggc
      181 gcacaccttc tctcgtggaa acctgcgggc gaagaagaag ttctgtggtt gagcaacaac
      241 acaccgttca aaaatggcgt cgctattcgc ggtggcgtac cggtttgctg gccgtggttt
      301 ggtccggctg cacaacaagg cctgcctgcg cacggttttg cccgcaacct gccgtggacg
      361 ctgaaatcac atcatgaaga tgctgatggc gtagcgctga cttttgaatt gacgcaaagc
      421 gaagagacga aaaaattctg gccgcacgac tttacgctgt tagcgcattt ccgcgtgggt
      481 aaaacctgtg aaatcgatct tgaatctcat ggcgaatttg aaaccacctc tgccctgcat
      541 acctacttta acgtgggtga tatcgctaag gtaagcgtca gtgggctggg cgatcgcttc
      601 attgataaag taaatgacgc gaaagaagat gtactgaccg acggtattca gaccttccct
      661 gaccgtaccg atcgcgtgta tctgaatccg caagattgca gcgtgattaa tgatgaagcg
      721 ctgaatcgta ttatcgccgt aggccaccag catcatctga acgttgtagg ctggaatccg
      781 ggaccggcgc tttcagttag catgggcgac atgccggacg atggctacaa gacctttgtt
      841 tgtgtagaaa cggcttacgc ttcagaaacg caaaaagtca ccaaagagaa acctgcacat
      901 ctggcgcaat ccattcgcgt tgccaaacgt taatttgcgt taatgttgtg tgccgggtgc
      961 gatgcatccg gcacgtatca acatcacacc atatccagcg cagtttttcc ttttggtgcc
     1021 ggatatgcct tatccagcat tgctaattcc gctgacgaaa gttcgacctc aagcgcagct
     1081 gcattttgtt ggacatgggc aatcgtggcc gcttttggaa tcgccatcac accatgatga
     1141 ctgatcaccc acgccaacaa tacttgtgcc gcgctgatat tgtgagcatg tgcaatttcg
     1201 ttgactaccg cgttttttaa cagtccattg cgcaaccgcc cggcctgggc taatggactg
     1261 taagccatca ctggcatatg ttgttgctgg caccagggaa gtagatcgta ctcaatccct
     1321 cgtgaaccga gatggtaaag cacctgatta gtggcacact gatttccccc cggcagctgc
     1381 cagagttcct gcatatcggc ataatcaagg ttagaaacgc cccagcgacg gatttttccc
     1441 tgggcgatca atttttccat cgcagcaaca gtctcttcaa aagcgaaact gccagaccag
     1501 tgtaataagt agagatcgag ataatcagta ttgagacggc gtaaactggc ttcgcatgca
     1561 tttatcgctt tttgcccgcc agcattccac ggatagactt tagagacgag aaagaccttc
     1621 tctcgcagac cggttaatgc ttccccaacc accttttcgg caccaccatc ggcatacatt
     1681 tcggcggtat caatgagggt taaaccgagt tcaatgcccg cgcgtagtgc agcaacttct
     1741 gttttgcgct gactggcatc tccgcccata taccatgttc cctgccctat ggctggcagt
     1801 gagacatcgc cactaaattg aatcattttt tgttgcattg tttcctccca ggtattgcac
     1861 caccgtaatg caaaacaggg cgtgacgccc tgtttttatg cacaaaatgc cctggaaaga
     1921 tgcattatca gaatttgtag gtgatcccgg tagaaatcag gccagtccag gatttatcca
     1981 ccattgggct gtcagtaact tcatcagaca gacgggtgta gcgcgcggta ccgtaaacac
     2041 tccagtcgcc gaggaagttg tagctggcgc tcagctcgag gtaagggctc cagctgtcat
     2101 tcgggttata gccacgcaga ccgctgcgag cggactcttt gcgcgatacg ccataatagt
     2161 attcgttctg gttttcgctg ttccactgca caccgatacc cggggtcacg gtcaggccgc
     2221 cgttggtgta acgatacaac caggccatat cccagacaat gccgttgctg ttatccaggg
     2281 tatcgccagc cagggtggta cgcaggtaac cgtactgggt aaagtgaaca taagacagac
     2341 cagccatcat ggtgctctta cggtcatcca ggtgacgcat ttggtgatcg ccactgtctt
     2401 tcgctttgaa gtaaagcggc gaccagtaag cggtaattga aagcttatcc gttgcgtcat
     2461 tccacaggta gtaaccacca cctaagccac ggaaccagaa gttatcgcct tcatagttga
     2521 ttaccggtac tgggtaaaca tcggtatcgt aatctttata tgggtgttca acgacaccta
     2581 cgcctgcgcc cagggaaaat ttaccttcag cgtgcgctac gcctgcagac gttgcgataa
     2641 gcactccaag tgccagaagt ttgagtttgg tcacaattaa tcattcctta aacaaatgtt
     2701 tagcgggcga caaagtttac ccgtcaatac atcgaaaccc aaccttttta cgttttcatt
     2761 ttttaaagta actgtttaat tttcctgacg cggatgacac cgcgcttaca gccaaatgaa
     2821 tttagcgtta ctggctaccc tggtctttac attaattatg caaaatttat ggatgagttg
     2881 ttgatatgcc attgaaatta agaaagccgt gcaggcaagt tttccatttg ccatctacgc
     2941 ttaattttga aggtgtatca ccgggcacgt tgttctcatc gtcgataaaa tggcatgaga
     3001 gttgctatgt tttagcaaga gacgtcgttc agtttacctc ttccgggagc ctctactatt
     3061 catatgaacg gctcttaacc tgtgctaaaa aacgaaagga cggcatacca tgaatatatt
     3121 cgatcactat cgccagcgat atgaagctgc caaggacgaa gagttcacac tgcaggagtt
     3181 tcttaccact tgtcggcaag atcgcagtgc ttatgccaac gcggctgagc ggctattgat
     3241 ggctatcggt gagcctgtca tggtcgatac agcccaggaa cccagacttt ctcgactctt
     3301 ttctaaccgg gtcattgcac gttatccggc gtttgaagag ttttacggca tggaagacgc
     3361 gattgaacag attgtctctt atctgaaaca cgcggctcag gggctggaag agaagaaaca
     3421 aatcctgtat ctgctggggc ctgtgggtgg gggtaaatca tcgcttgctg agcgactgaa
     3481 atcattaatg cagctcgtac cgatttatgt attgagcgcc aacggtgagc gtagcccggt
     3541 caacgatcat ccgttctgtc ttttcaatcc acaggaagat gcgcagattc tggaaaaaga
     3601 gtatggcatt cctcgccgtt atctcggcac catcatgtcg ccgtgggcgg caaaacgcct
     3661 gcatgaattt ggtggcgata tcactaagtt ccgggtagtg aaggtctggc cgtcaattct
     3721 gcaacaaatt gctatcgcca aaacggaacc cggcgatgag aacaaccagg acatctccgc
     3781 gctggttggg aaagtcgata ttcgtaaact cgaacactac gcgcagaatg acccggacgc
     3841 ctacggctat tccggtgcgc tgtgccgcgc caatcagggg atcatggaat tcgttgagat
     3901 gtttaaagca ccgattaaag tgctgcatcc cttgttaacc gccactcagg aaggtaacta
     3961 caacgggacg gaaggtatct ccgccctgcc gttcaacggg attattctcg cccactcgaa
     4021 cgagtccgaa tgggtcactt tccgtaataa caaaaacaac gaagccttcc tcgatcgtgt
     4081 ttacatcgtg aaggtgccgt attgcttgcg catttccgaa gagatcaaaa tctacgagaa
     4141 attgcttaat cacagtgaat tgactcacgc cccatgcgcc cctggcacgc tcgaaacact
     4201 gtcacgtttt tccattcttt cgcgcctgaa agagccagaa aaatccagca tttattcaaa
     4261 gatgcgggtt tatgatggcg aaagtctgaa agacaccgat cccaaagcca agtcgtatca
     4321 ggaatatcgt gactacgccg gtgtcgatga agggatgaac ggtctgtcga cgcgttttgc
     4381 gtttaagatc ctctcccgcg tgttcaactt cgatcatgta gaagtggcag caaacccggt
     4441 ccatctgttc tacgtcctag aacagcagat cgagcgcgag cagttcccac aagagcaggc
     4501 agaacgctat ctggagttcc tgaaaggtta tctgatcccg aaatatgccg agtttatcgg
     4561 caaagagatc cagacggcct accttgaatc ctattccgaa tatgggcaaa acattttcga
     4621 ccgttatgtt acctacgcgg atttctggat tcaggatcag gagtatcgcg atccggatac
     4681 cgggcagctg tttgaccgcg agtctcttaa cgccgagctg gagaaaatcg agaaaccggc
     4741 ggggatcagt aatccaaaag atttccgcaa cgagattgtt aacttcgtac tgcgcgccag
     4801 agcgaataac agcggacgca atccgaactg gaccagctat gaaaaactgc gcacggtcat
     4861 cgagaagaaa atgttctcca ataccgagga gctgttgccg gttatctcgt ttaacgccaa
     4921 aacgtcaacc gacgagcaga agaaacacga cgactttgtc gaccgtatga tggaaaaagg
     4981 ctacacccgt aaacaggtgc gtttactgtg cgaatggtat ttgcgcgtac gtaaatcgtc
     5041 ttaacaaccc tggcccggta cacatgttac cgggcctaca acgacagcga accgtgggcc
     5101 tgagaagcgg caacacaggc gtagcataca gttggcaaat gtagtacggg gggcatatga
     5161 cctggtttat tgaccggcgt ctgaacggca aaaacaaaag catggtgaat cgccagcgtt
     5221 ttttacgccg ttataaagcg caaattaaac agtcgatctc cgaggccatt aataagcgtt
     5281 cggtgactga cgtcgacagc ggcgaatccg tatccattcc cacggaagat attagcgaac
     5341 cgatgtttca tcaggggcgt ggcggcctgc gccaccgcgt acatccgggc aatgaccatt
     5401 tcgtccagaa cgaccgaatt gaacgtcccc agggtggcgg cggaggttcc ggcagtggtc
     5461 agggccaggc cagccaggat ggtgaaggtc aggatgaatt tgtctttcag atttcgaaag
     5521 atgagtatct tgatctgctc tttgaagatt tggccttacc gaatctgaaa caaaaccaac
     5581 aacgccagct gaccggatat aaaacgcatc gggcgggtta tactgctaac ggcgttccgg
     5641 ccaatatcag cgttgtgcgt tccttgcaga actcactggc gcgacgcaca gccatgacgg
     5701 caggcaagcg gcgggaactt catgcactgg aagagaatgt ggccatcatc agcaacagtg
     5761 aacctgcgca gctgctggaa gaggaacgtc tgcgcaaaga aattgcagaa ttacgtgcca
     5821 aaattgaacg cgtccctttt attgacacct tcgatttacg ttacaagaac tacgagaagc
     5881 ggcccgatcc ctccagccag gcagtgatgt tttgcctgat ggacgtttcc ggttcaatgg
     5941 atcaatccac taaagatatg gctaagcgtt tttatattct gctgtatctg ttcctcagca
     6001 gaacgtataa gaacgtggaa gtcgtataca tccgccatca tacccaggcg aaagaagtcg
     6061 atgaacatga gtttttctac tcgcaggaaa caggcggcac cattgtttcc agcgccctga
     6121 aactgatgga tgaggtagtg aaagagcgtt ataacccggc acagtggaat atttacgctg
     6181 cacaagcatc ggacggcgat aactgggccg atgactctcc gctttgccat gaaatcctgg
     6241 cgaaaaaatt attacctgtt gttcgttatt acagctatat cgaaattacc cgtcgtgcac
     6301 atcagacatt gtggcgagaa tatgagcatc tgcaatctac tttcgacaac tttgcgatgc
     6361 agcacatccg cgaccaggat gatatttatc cggtgttccg tgaactgttt cataaacaaa
     6421 atgcaacagc taaagactaa aactatcagc taggtcatta tcgcctggct gatttttagc
     6481 ttactgtaaa ttatctcatt tattacatac attagcttac aatcgcttta aatatgacag
     6541 cataaccttt acataattta gttccagaaa acaatcattc ggaaaaatga ttcagtcaac
     6601 acgtatttcc atggggttat tctttaaata ttttttatcg ttaacgaaaa ttgatcttgg
     6661 tcaaaactat atatctctgc catcaataaa atccagcact cacattgctc tcctttttat
     6721 ggtttctatg ggtacacaaa aattaaaagc tcaaagcttt tttattttca gtttattgct
     6781 gacgttaatt ttattttgca ttactacctt atataacgaa aacacaaatg taaaactcat
     6841 cccacagatg aattacctga tggttgttgt ggctttgttt ttccttaacg ccgtcatttt
     6901 tcttttcatg ttaatgaaat atttcactaa caaacaaatt ttaccaacac tcattttaag
     6961 ccttgcattt ttaagtggcc ttatctattt agttgaaacc attgtaatta tccataaacc
     7021 aattaacggc agtacactga tccagacaaa gtcgaatgat gtttctattt tctatatttt
     7081 ccgccaactc agttttattt gtttaacctc gctggcgctc ttttgttatg gaaaagacaa
     7141 catccttgac aacaataaga aaaaaacggg aatcctgttg ctggcgctga ttcctttttt
     7201 agtttttccc cttctggcac acaatctgag cagttataac gctgactatt ctttgtatgt
     7261 cgtcgattac tgtccggaca accatactgc gacctgggga atcaactata caaaaatatt
     7321 ggtttgtctg tgggcatttt tactgttctt tattatcatg cgtacacgat tagccagcga
     7381 actatggccg ttaatagcat tattatgtct ggcatcgcta tgctgcaact tacttctact
     7441 gactctggat gagtataatt ataccatctg gtatatcagt cgcgggattg aagtctccag
     7501 taaactgttt gttgtgtctt ttctgattta taacattttt caggagctgc aactctccag
     7561 caaactggca gttcatgatg tgctgaccaa tatttataat cggcgctact ttttcaacag
     7621 cgtagagtca ttattgtcgc gacctgttgt taaggacttc tgtgtcatgc tggttgatat
     7681 taatcagttc aaacgcatca atgcccaatg gggacatcgt gtgggtgata aagtgctggt
     7741 ttcaattgtc gatattatcc agcaaagcat ccgccccgat gatattttag cgcgactgga
     7801 gggtgaggtg tttggcttgc tatttaccga actcaatagt gcccaggcaa aaatcattgc
     7861 ggaacatatg cgtaaaaatg tcgaactcct gaccggcttt agtaacagat atgatgttcc
     7921 tgaacaaatg accatcagta ttggcacggt tttttcaacg ggtgacacgc gtaatatctc
     7981 gcttgtcatg acggaagcag ataaagcctt acgcgaagcg aaaagcgagg ggggcaacaa
     8041 agtgattatt catcatattt aagtgcaaaa atattcagag ccatgctttt tgcgtggctt
     8101 ttgcatacaa tttattacta ttacccctaa atttcccctc cccagcggcg cagagatgag
     8161 tataattagc gcccctgtgc caggccgcaa tcgaacttta tctggttttc tcgtttcact
     8221 aaccgaagga gtgccattta tcatgaaatt gcaccataga atgctccggc attttatcgc
     8281 cgcaagtgtc attgtgctga catattcctt ccttattttt gaacttgtcg ccagcgacag
     8341 agcaatgagt gcctatctgc gctatatcgt gcagaaagca gactcctcct ttctttatga
     8401 taagtatcag aatcagagta ttgccgcgca tgtgatgcgc gctctcgctg ctgagcagtc
     8461 ggaagtgtcg ccagaacagc ggcgcgccat ctgcgaggct tttgagtctg ccaataatac
     8521 ccatggctta aacctgactg cccataaata cccgggctta cgcgg
//
LOCUS       DAJVTL010000158         8563 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.160, whole genome shotgun sequence.
ACCESSION   DAJVTL010000158 DAJVTL010000000
VERSION     DAJVTL010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8563
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.160"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..962
                     /locus_tag="OQQ26_003754"
     CDS             <1..962
                     /locus_tag="OQQ26_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020883197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HCS1859060.1"
                     /translation="LFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATE
                     PLAGLTMDKIVAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKG
                     EILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEER
                     RSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIG
                     SLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIIS
                     SEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
     gene            978..1988
                     /gene="mglC"
                     /locus_tag="OQQ26_003755"
     CDS             978..1988
                     /gene="mglC"
                     /locus_tag="OQQ26_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HCS1859061.1"
                     /translation="MSALNKKSFLTCLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVEGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
                     MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVGLNLLMIYALSGVFYAFGGMLKAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYAR
                     KK"
     gene            complement(2059..3294)
                     /gene="preA"
                     /locus_tag="OQQ26_003756"
     CDS             complement(2059..3294)
                     /gene="preA"
                     /locus_tag="OQQ26_003756"
                     /EC_number="1.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HCS1859062.1"
                     /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV
                     VFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDK
                     VLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYC
                     RAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMP
                     IVNGKSSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGA
                     ATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANHNIVPAEDLDRSYI
                     VYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGC
                     IELGEVKFKKGEKEHPVTL"
     gene            complement(3288..4526)
                     /gene="preT"
                     /locus_tag="OQQ26_003757"
     CDS             complement(3288..4526)
                     /gene="preT"
                     /locus_tag="OQQ26_003757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreT"
                     /protein_id="HCS1859063.1"
                     /translation="MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
                     GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQ
                     RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPG
                     GWLRNGIPQFRLSQSVLDAEIARIEKMGVTIKCNNEVGKTLTLEQLKAENRAVLVTVG
                     LSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLG
                     CQAVTCVAREELDEFPASEKEFANARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELT
                     MAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAV
                     KTGKEAAEAIHHYLEGACSC"
     gene            complement(4845..5084)
                     /locus_tag="OQQ26_003758"
     CDS             complement(4845..5084)
                     /locus_tag="OQQ26_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HCS1859064.1"
                     /translation="MDIQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
                     VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR"
     gene            complement(5087..5806)
                     /gene="sanA"
                     /locus_tag="OQQ26_003759"
     CDS             complement(5087..5806)
                     /gene="sanA"
                     /locus_tag="OQQ26_003759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HCS1859065.1"
                     /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKINYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
                     AQGYPAVTPEQLLELQKKQGK"
     gene            complement(5956..6840)
                     /gene="cdd"
                     /locus_tag="OQQ26_003760"
     CDS             complement(5956..6840)
                     /gene="cdd"
                     /locus_tag="OQQ26_003760"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HCS1859066.1"
                     /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
                     TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
                     AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
                     LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
                     DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLLQWDTT
                     SATLKALGCHSIDRVLLA"
     gene            complement(6970..7665)
                     /locus_tag="OQQ26_003761"
     CDS             complement(6970..7665)
                     /locus_tag="OQQ26_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HCS1859067.1"
                     /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
                     LMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
                     MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
                     APFLFPIILAVMG"
     gene            complement(7662..8060)
                     /locus_tag="OQQ26_003762"
     CDS             complement(7662..8060)
                     /locus_tag="OQQ26_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HCS1859068.1"
                     /translation="MSKTLNIIWQYLRTFVLIYACLYAGIFIASLLPVTIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
                     STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
     gene            8299..>8563
                     /locus_tag="OQQ26_003763"
     CDS             8299..>8563
                     /locus_tag="OQQ26_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HCS1859069.1"
                     /translation="MRVLLAPMEGVLDSLVRELLTEVNDYDLCIIEFVRVVDQLLPVK
                     VFHRICPELQNASRTPSGTLVRVQLLGQFPQWLVENAARAVELG"
BASE COUNT         2170 a         2179 c         2099 g         2115 t
ORIGIN      
        1 atctgttcac tattattcgt aaattaaaag agcgcggctg tggtattgtt tatatctcgc
       61 ataaaatgga agaaatcttc cagttatgtg atgaagttac cgtattgcgc gacggtcagt
      121 ggatcgccac cgaaccgctg gcaggactga cgatggacaa gatcgtcgcc atgatggttg
      181 ggcgttctct taaccagcgt ttccctgaca aagaaaacaa gccgggcgaa gtcatcctcg
      241 aggtgcgtaa cctgacgtca ctgcgccagc cgtcgatccg tgatgtctcg tttgatctgc
      301 ataaagggga gatcctcggt attgccgggc tggtgggggc gaaacgtacc gatattgttg
      361 agacgttatt tggtattcgc gagaaatcgg ctggcaccat tacgttgcac ggcaaacaga
      421 tcaataacca taatgccaac gaagccataa accacggatt tgcactggta actgaggagc
      481 gccgctcaac gggaatttat gcctatctgg atattggttt taactcgtta atttccaata
      541 ttcgcaacta caaaaataaa gttggtttac tggataactc gcggatgaaa agcgataccc
      601 agtgggtgat tgattcgatg cgggttaaaa cgccggggca tcggacgcaa attggttcgc
      661 tctccggtgg taatcagcaa aaggtgatta ttggtcgctg gctactaacg caaccagaaa
      721 tattaatgct cgatgaaccg acgcgcggta ttgatgtcgg ggcgaagttt gagatctatc
      781 agttaattgc cgaactggcg aagaaaggca aagggattat tattatctcc tctgaaatgc
      841 ctgagttgtt agggataaca gaccgtattc tggtcatgag caatggtctc gtttctggaa
      901 ttgtcgatac aaaaacaaca acgcaaaacg aaattctgcg tcttgcgtct ttgcaccttt
      961 aagattaggg gcttcccatg agtgcgttaa ataagaaaag ttttcttact tgcctgaaag
     1021 agggcggtat ttacgtcgtt cttttagttt tgctggcgat tattattttc caggacccaa
     1081 catttttaag tctgttgaac ttaagtaata ttctcaccca gtcatcggtg cgtattatta
     1141 tcgcgcttgg tgtggaaggg ttaattgtca cccaggggac cgatctttct gctggtcgtc
     1201 aggtagggct ggcggcagtg gtggcagcga cattattgca gtccatggat aacgctaaca
     1261 aagtgttccc ggaaatggcg acgatgccaa ttgcgctggt tattctgatt gtctgtgcca
     1321 ttggtgcggt gatcggtttg atcaacggtc tgattatcgc ttatctcaac gtgacgccgt
     1381 tcattaccac gctcggcacg atgatcatcg tctatggcat caactcgctc tattacgact
     1441 ttgtcggggc gtcgccgatt tctggtttcg acagtggctt ctctaccttt gctcagggct
     1501 ttgtcgcgct ggggagtttc cgtctctctt acatcacctt ctacgcgctg attgcggtgg
     1561 cgttcgtctg ggtgttgtgg aacaaaaccc gcttcggtaa gaacattttt gccattggcg
     1621 gtaacccgga agcggcaaaa gtatctggtg tcaacgtcgg cctgaacctg ctgatgatct
     1681 acgcgttgtc tggcgtgttc tatgcctttg gcgggatgtt aaaagccgga cgtatcggct
     1741 ctgccaccaa caacctcggc tttatgtatg agctggatgc tatcgcggcg tgcgtggtag
     1801 gcggtgtatc gttcagcggc ggtgtgggga cggtgattgg cgtggtgacc ggggtaatta
     1861 tttttaccgt catcaactat ggcctgacgt atatcggcgt aaacccatac tggcagtaca
     1921 tcatcaaagg ggcgattatt atcttcgccg tagcgctgga ttcactgaaa tacgcgcgta
     1981 agaagtgatg taattgtgga tattgccgga tgcgctgcat ccggcaatcg gtgccaaatg
     2041 ccggatgcgt ctctggtttt acaacgttac cgggtgttct ttctcgcctt tcttaaactt
     2101 cacttccccg agctcaatac aacccaccgg gcagacgtga ccacaaagca gacaacccac
     2161 acatttctcg gtattacaat gcggtgtgcg ggttttctcg ctccattcca tcgcctggtg
     2221 accgccgtcg taacaggaaa tataacagcg tccacagcca acacatttat caagattgat
     2281 acggggatag acaatataac tgcggtctaa atcttccgcc gggacaatat tgtgattcgc
     2341 cagacctacc atctcctgca acgaatcaaa tccctgatcg gcgagataat gcgacaaccc
     2401 gctcgccata tcttccacta tccgatagcc gtactgcata atgccggtgg tgacctgtaa
     2461 cgttgctgcg ccgagcaata aaaactccgc cgcatcttcc caggtttcaa tgccgccgat
     2521 accgctgatc gggaaatcgc gcagttctgg atgggtgcgc atttgctgaa taaagcgcag
     2581 ggcgatcggt tttaccgctt taccggaata tccggaaata ctcgatttac cgttcacgat
     2641 cggcataccg attttctgat taagatcgat attggtgatg gatttaacgg tgttaattgc
     2701 cgcaatgcca tctgcgccgc cgcgcttcgc cgccagcgcc acttcgcaca tatcaccgat
     2761 attcggtgtc atcttcgcca gcatcggcag cgtggaaccc cgtttaactg cccgacaata
     2821 tttttctacc agctccgggc tttgcccgac atcgctaccc atcgcatgag acgtcatttg
     2881 cggacaggag aagttacact cgatcatatc cgcgccagct tcttgcacta ggcgcgccag
     2941 ctcctcccat tgctgctcat tttcccccat gatcgaagcg atcaatactt tgtccgggta
     3001 atcttccttc agccgacgca gggcggccag attctcttcc aacggatgct cggcaatctg
     3061 ctccatattt ttgaagccga taaaaccggt atcttctttc accagatgat caaaacgtgg
     3121 cgagacttcg ttggcgataa aaaagccgat cgttttaaac accacgccgc cccaacctgt
     3181 gtcgtaggct ttggcacaca tctcatagca gttgcctacc ggtgaagaag aaaggcagaa
     3241 cgggttggga aacttcacgc cgcaaaaggt aatcgaaaga tctttcgtta acatgagcaa
     3301 gctccctcta aatagtgatg aatcgcctcg gcggcttctt tcccggtttt cacggcatag
     3361 accacggttt tgtcaccctc aacaatatcg ccagcagcaa agacttgcgg atcgcgggtc
     3421 tgataatttt gtgttttgat ggtgttacgc tgcggctcta actccgcaaa ggcatccagt
     3481 ctggcatgct gaccgacggc gagaataatt ttatctgccg ccatcgtcag ttcgcccgat
     3541 aaccgtacat gcttaaacgt gactttattg ccttccacgg ctactggcgt gaatccatcg
     3601 atgatcgaaa cgcccagctc ccgggcgttg gcaaactctt tttcgcttgc cggaaactca
     3661 tctaactctt cacgcgctac gcaagtcacc gcctgacagc cgagaacttt cagcgtgctg
     3721 gctacgtcca tcgcgacatc accgccgccg ataattaatg cgctttgtgg aatgctgata
     3781 tcgccttgcg cctgtcgtgc acgttgcaag aaatcgacag caatttcaac gtcgctatgc
     3841 tcaaacagcg gtagcccgga accgcttgat aaccccacgg tgaccagtac cgcgcggttt
     3901 tccgctttca gttgctccag ggtgagtgtt ttaccgactt cgttgttgca cttaatggtc
     3961 acgcccattt tttcaatacg ggcgatttct gcatccagca ctgattgcga taaccgaaat
     4021 tgcggaatac cgttacgcaa ccagccaccg gggtgcgctt ctttctcata gatcgtgacg
     4081 tcataaccct ggtttgtcag tgtcacactg gcctgcaatc cggcaggacc tgcgccaata
     4141 atcgcgactt tgccgagcgt tttagtaccg ggctgataaa tttccatccc ggtttgttgt
     4201 tcaaaatcag taacaaaacg ctgtaagcgg ccgatatcaa tgggagcatc aacaccggca
     4261 cgggtacaac cgctttggca taatttctcc gtcgggcaca ctctggcaca aacggcaccg
     4321 agggcattat tttcgcgaat tgtctcggca gcgcctttaa aattacgaaa gtagattgag
     4381 cgaataaatt tccccggatc ggtctgtgcc gggcaagcct gactacaggg agcgtcatga
     4441 cataataaac agcgagaggc ttctttaatc gccagtaaag gcgtaaaagc cggagtgagt
     4501 tcatccagat aattttgttg cggcatgtga tcttccttaa tgctatgagt aattaaggcg
     4561 aacgctaaat atactcgtca tacttcaagt tgcatgtgct gcgtctgcgt tcgctcaccc
     4621 cagtcactta cttatgtaaa ctcctgggga ctcactcact tgtcgccttc ctgcaactcg
     4681 aattatttag agtataaata ttgcgtgctg atattaaggc tatgcgcgtg gggaaattta
     4741 aactgtgaaa ggattcacaa atagctgcgg ttcagaatgt tatatccgca gcttattgcg
     4801 tgaagtaata attattctca ataattaaca gaaaagagaa aatattaacg atagaaaata
     4861 agataaacaa tcatgccgat agataaaatt ccgaagccga tatatgccac catataagcg
     4921 aaaaagagtc cgggattttt tgctcgccag acatacaccg gttccggtgc atttttaacc
     4981 cgtttatcaa tcgcgcctgc gcgccagcct ttccatgctt cgcgaaaaca aaatatcggg
     5041 ataaggaaaa aaacagcaac gacaaaaaac tgctgaatat ccatcactac tttccttgtt
     5101 tcttttgtaa ttcaagtaac tgttcgggtg tgacggcggg atacccctgc gcatcttccg
     5161 gaacctggtg catagccgga atagggacca gcggccctaa aaaacgcggt tcacgtttaa
     5221 aaatataaag gtcagccagc gcaccgaaac gggcggcaaa ttcacgaata cgtactgaca
     5281 gcatatcttt cggtgacggt acggcataac actgagcctg aatccccata tgcagcgcaa
     5341 taaataatgc ccgctcacag tggaaacgtt gggtgataat aatgaaatca ttagtatcga
     5401 aaactttgcg tgtacgcacg atggaatcca gcgtacgaaa gcctgcgtaa tcgagaacaa
     5461 tatctgatgg gtcgacacca gcagcgatta aatctttgcg catggtcatc ggctcattat
     5521 aactttgcaa tgcgttatcg ccgctcagta atagataatt tatcttaccg ctgttatagg
     5581 cattaatcgc tccttgaatg cggtagcgat aatactgatt aattacgcca gtacgataat
     5641 attttgcggt gccgagcacc acgccgacct ggcggtaggg gagatcctgc aattcgtcgt
     5701 agatataagg cgcggttttc cagctcatcc agcgatcgag gccgagcaca gtcaacagca
     5761 gcaagccgat caggactaac aggctgagga acacgcgctt taacatgcag gagactcgat
     5821 ctaaggaaaa tttccatcag gctactttac ccgctggttt tgcgcaagaa acggcaaact
     5881 gtttgccggg attttcgaca ccaggagagg gctggcaagc cggacaaggc gttcacgccg
     5941 catccggcac caggcttaag cgagaagcac gcggtcgata ctgtgacagc cgagcgcttt
     6001 cagcgttgcg gaggtggtat cccactgaag caacggcgca tcggcttttt ctgccagaac
     6061 cgcgcgctgg atatccgggt aatcataacc cttgagattc aacagaatta acgctccctg
     6121 caacggcggc agagtcgggt tgaatgcggc gttttcagcg tagctgccgc tgaaaattcg
     6181 accgtcttta cattccagcg caacaccgct tggcgactta ctgtaaggca tgtgcgaacg
     6241 gtttgccgcc gcaatcgccg cctgagaaag cgcatcacca gtcagcgcat agccgtgatc
     6301 ctgctcgtcc atcagcagcg ttttaatctc cagatctttc ggcccaaagg catccggcag
     6361 atagtcacgc agcgcgtgtg cctcgcggcc cggcaaatga atacgcagat ccagaccgct
     6421 gttcagttca ttcataaact gacggcagtg accacaaggc gtgtagttaa cggtgatggc
     6481 tgcaagcgct ttttcaccac tcaaccaggc gtggctgatc gcgctttgtt cggcatgaac
     6541 ggtttgctgc attgtcgcac caataaattc catattggca ccaaaatacc aggttccgct
     6601 cacaccgcgc gcaattgcgc caacattaaa attcgacaat ggcgtacgcg cacaggccgc
     6661 cgccagcgga agtagtgcga atgccagcgc gtcttcgtcc agccccgttg cgctcttcag
     6721 cgatgagact tgctccccgg tcaacaaagc ggggaagtac ttgtctgcca gaataggttc
     6781 cagtgcagat tgcaagttat ccgcaagttg ggcaaaagcg gtttgaaaac gtggatgcat
     6841 ggcgttgcct cataatcatg taatgggata acagtttacg aacccgttat ggctttatat
     6901 gtgatctgaa tctcattaat tatgcaacac gtgaaactta catcaaaaat gcgcgacgca
     6961 tcgcaaattt tagcccatta ctgccagaat aatcgggaaa aggaacggtg cgatcagaga
     7021 agtaattatc ccgcataaca ccagcgctag cgaactaaat gcaccttcct gataatccag
     7081 ctcggcgcag cgcgccgtac cgagggcgtg cgaggcagtc cccattgcca gaccgcgcgc
     7141 agctttggta cgaatacgca tcgcattaag caatgtatgg ccaaataccg cgccgaggat
     7201 gccgacgaaa atcacgcaaa ctgcgctgat tgccggaata ccgccaatac tgccgccaac
     7261 cgccattgca ataggcgtgg tgactgattt cggcaggatt gacgcggcga tttccggtga
     7321 agcgcccatc aacaatgcca cggaagtccc cgtcaccatc gcaaccacgc tgccgataaa
     7381 acagatggtg atgattgatt tccagcgcgc gcggatctgg tgtagctgct catataaagg
     7441 ataggccagc gcgacgaccg ccggttgcag cagatcgttt agcacttcgc tacctttaaa
     7501 gtagctatcg taagagatgc cggtcagcat taaaaaagga atgatcacca ccattgctac
     7561 cagcaacggg ttaagcaggg gaaacttata ccgtgccgcc agtttgcggg cggcaaaaaa
     7621 gacaatcaac gtcagcggta atgaccacca gatattcgcc atcattcttc tgatcctttc
     7681 tgacctacga ctttacgttc accgtgtacc agttgtgaac tccagctcac caccagaaaa
     7741 accaccagcg tactgactgc acaggaaacc actaccgggc caaactgtgc gcggagcaaa
     7801 tcaaaatatt gcatgacgcc tacgccaatc ggcacaaaca atagcgccat atagcgaatc
     7861 agtacgtagc accccggatt gacccatttt gccggaagaa tttgcaaggc cagcagaaca
     7921 aacaggatca gcatcccgat gatgctgccc ggaatggtta ccggtagcag ggaagcaatg
     7981 aaaatgcctg catacaggca ggcataaatc aggacgaaag tgcgtaaata ttgccagata
     8041 atgttcagtg tcttactcat aatcaacacc ccagatgaga tggattcatc atacaattaa
     8101 ttcgtaaaac gtgctaccga tcacattaag aaatcagcgc ttattttttc gctccccggt
     8161 attacgcaat gagcagcgaa ctcaggcata catcaagcat agagagggat tgcagtttgc
     8221 agcaatccct ctttgcagac ctttaatccg ctgaccatag gcgctaacat agcgcctcat
     8281 ttttttgcgg gtgatgatat gcgtgtgtta ctggcaccga tggagggagt gcttgactct
     8341 ctggtgcgtg aattgctgac cgaagttaac gactacgatc tgtgcatcat cgagtttgtc
     8401 cgcgtggtgg atcaactgct gccggtaaaa gtctttcatc gcatttgccc tgagctacaa
     8461 aacgccagcc ggacaccatc cggtacgctg gtgcgcgttc agttgttagg tcagttccca
     8521 caatggctgg tagagaacgc cgcccgtgcg gtggaattag gtt
//
LOCUS       DAJVTL010000159         8533 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.161, whole genome shotgun sequence.
ACCESSION   DAJVTL010000159 DAJVTL010000000
VERSION     DAJVTL010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8533
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.161"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            117..1154
                     /gene="iap"
                     /locus_tag="OQQ26_003764"
     CDS             117..1154
                     /gene="iap"
                     /locus_tag="OQQ26_003764"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase isozyme conversion
                     aminopeptidase"
                     /protein_id="HCS1859070.1"
                     /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
                     PGRMAGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIA
                     AHEGKAPQQIIIMTHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
                     TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
                     KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
                     EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
                     LPLVKELAKAS"
     repeat_region   1237..1570
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=1298..1326
                     /rpt_unit_seq="cggtttatccccgctggcgcggggaacac"
     gene            complement(1667..1960)
                     /gene="cas2"
                     /locus_tag="OQQ26_003765"
     CDS             complement(1667..1960)
                     /gene="cas2"
                     /locus_tag="OQQ26_003765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HCS1859071.1"
                     /translation="MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
                     QQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
     gene            complement(1960..2880)
                     /gene="cas1e"
                     /locus_tag="OQQ26_003766"
     CDS             complement(1960..2880)
                     /gene="cas1e"
                     /locus_tag="OQQ26_003766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
                     /protein_id="HCS1859072.1"
                     /translation="MTFVPLSPIPLKDRTSMIFRQYGQIDVLDGAFVLIDKTGIRTHI
                     PVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQ
                     AKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
                     NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYD
                     IADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTSKLIPLIEQVLAAGE
                     IEPPQPASDMLPPAIPEPETLGDSGHRGRG"
     gene            complement(2877..3527)
                     /gene="cas6e"
                     /locus_tag="OQQ26_003767"
     CDS             complement(2877..3527)
                     /gene="cas6e"
                     /locus_tag="OQQ26_003767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HCS1859073.1"
                     /translation="MYLSRITLHTGQLLPAQLLHLVDRGEYVMHQWLWDLFPGGKERQ
                     FLYRREELQGAFRFFVLSQERPAESETFTIECRSFVPELRTRQQLCFNLRANPTVCKA
                     GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
                     LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
     gene            complement(3509..4186)
                     /gene="cas5e"
                     /locus_tag="OQQ26_003768"
     CDS             complement(3509..4186)
                     /gene="cas5e"
                     /locus_tag="OQQ26_003768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005118404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HCS1859074.1"
                     /translation="MRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCA
                     SRNPRWARDYHTVQMPKEVRKARYFSRREELSNPELLSAIISRRDYYTDAWWMVAVAT
                     TADAPYILEQLQEGLRHPVFPFYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQNH
                     FRKLKVSLPKLHDECWWEGVHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKE
                     EPCTSQE"
     gene            complement(4266..5321)
                     /gene="cas7e"
                     /locus_tag="OQQ26_003769"
     CDS             complement(4266..5321)
                     /gene="cas7e"
                     /locus_tag="OQQ26_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas7/Cse4/CasC"
                     /protein_id="HCS1859075.1"
                     /translation="MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGAMRLRVSSQSL
                     KRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAK
                     NDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRIAVD
                     IAMFGHMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGE
                     TGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAY
                     ASWAMAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTEYVSFD
                     VMNKQGSMKDVLDFICA"
     gene            complement(5333..5872)
                     /gene="casB"
                     /locus_tag="OQQ26_003770"
     CDS             complement(5333..5872)
                     /gene="casB"
                     /locus_tag="OQQ26_003770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse2/CasB"
                     /protein_id="HCS1859076.1"
                     /translation="MSIVKEEHKATLRKWHEELQAKRGNRASLRRSTTVNDVCLSEGF
                     RSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKVIDERQPFAAQLAAVMSEGRFTRL
                     SAVKTPDDLLRQLRRAVKLLNGSVNLISLADDIFRWCQESDDLLNHHRRQQRPTEFIR
                     IRWALEYYQAGDADNEQNQ"
     gene            complement(5869..7431)
                     /gene="casA"
                     /locus_tag="OQQ26_003771"
     CDS             complement(5869..7431)
                     /gene="casA"
                     /locus_tag="OQQ26_003771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse1/CasA"
                     /protein_id="HCS1859077.1"
                     /translation="MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADL
                     QGAAWQFLLGLLQTSFAPKDYRRWDDIWEDGLESEKLREALRSLEHAFQFGPDSPSFM
                     QDFEVLTGDKVPVASLLPEIPCAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNA
                     PSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWLNVMPQDEADLPLPKKFDD
                     LIFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDA
                     LLSLMTTRNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKS
                     ENNTELPAMVVKLFNPSSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIP
                     KLRLAAQTASRILSLLRSALKEAWFSDPKGTRGDFSFVDIDFWNKTQHRFLRLVRQIE
                     DGQDADELLGKWQKEMWLFARQDFDERVFTSPYEPVDLKRVMTARKKYFTTSAEKQNA
                     KAAREKKQEAVE"
     gene            complement(7529..8533)
                     /locus_tag="OQQ26_003772"
                     /pseudo
     CDS             complement(7529..8533)
                     /locus_tag="OQQ26_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142534.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase/endonuclease Cas3"
BASE COUNT         2083 a         2306 c         2063 g         2081 t
ORIGIN      
        1 aaaagtgctt aaggcaccgg atttcgggcg tttaggaaga tttgaaattg ttttagcgca
       61 gcggcagttt catactatgg cggtaaaaaa atttgcatgg tatttaagga ctcactatgt
      121 tttccgcatt gcgccaccgt accgctgccc tggcgctcgg cgtatgcttt attctccccg
      181 tacacgcctc gtcacctaaa cctggcgatt ttgctaatac ccaggcacga catattgcta
      241 ctttctttcc gggacgcatg gccggaactc cagcagaaat gttatctgcc gattatattc
      301 gccaacagtt tcagcaaatg ggttatcgca gtgatattcg gacatttaat agtcggtata
      361 tttataccgc ccgcgataat cgcaagaact ggcataacgt gacaggaagt acggtgattg
      421 ccgctcatga aggcaaagcg ccgcagcaga tcatcattat gacgcatctg gatacttacg
      481 ccccgctgag cgatgctgac gccgatgcca atctcggcgg gcttacgtta caaggaatgg
      541 atgataacgc cgcaggttta ggtgtcatgc tggaattggc agaacgcctg aaaaatacgc
      601 ctaccgagta tggtattcga tttgtggcga ccagcggcga agaggaaggg aaattaggcg
      661 ctgagaattt actcaagcgg atgagtgaca ccgaaaagaa aaatacgctg ctggtgatta
      721 atctcgataa cttaattgtt ggcgataaat tgtatttcaa cagcggtgta aaaacccctg
      781 aagcagtaag gaaattaacg cgcgacaggg cgctggcaat tgcgcgcagt cacggaatag
      841 ccgcaacgac caatccgggt ttgaataaaa attatccgaa aggcactggg tgttgtaatg
      901 acgcagaaat attcgacaaa gcgggcattg ctgtactttc ggtggaagcg actaactgga
      961 atcttgggaa taaggatggt tatcagcaac gcgcaaaaac agccgcattc cctgcgggaa
     1021 atagctggca tgacgtaaga ctggataatc aacagcatat tgataaggca cttcctggaa
     1081 gaatagaacg tcgctgccgt gatgttatgc ggataatgct accgttggtg aaggagttgg
     1141 cgaaggcatc ttaatgggtt tgaaaatggg agctgggagt tctaccgcag aggcggggga
     1201 actccaagtg atatccatca tcgcatccag tgcgcccggt ttatccccgc tgatgcgggg
     1261 aacactatga cgatgcgacg aaaataattg ttgctgacgg tttatccccg ctggcgcggg
     1321 gaacacacgt atcgttccac cgcctcatgt cgttggaccg gtttatcccc gctgacgcgg
     1381 ggaacacata acgacaagcc agtatttttc cgttaataac ggtttatccc cgctggcgtg
     1441 gggaacacga cgacacgtaa cgttcgattc acgccggatg cggtttatcc ccgctggcgc
     1501 ggggaacacg gtggggatta atgctggagc tgtaccggca acggtttatc cccgctggcg
     1561 cggggaacac actaagcata catatctgtt tttaaacaaa tttattccac atcaacaatc
     1621 taccaactaa attcaaacat ttccttattt ttaaagaata cataacctat tgattatcaa
     1681 caggaagaaa agaaaccaaa cgtaacccat ccaaatccac cggaatacgt ctgttttctc
     1741 cccaggtctg aaattcaaaa cccgactcgg tattggtcgc ccaggccatc accacattcc
     1801 cgcaacctgc cagttgggta atttgctgcc agatcatctc ccgaatacgt ttggatgtat
     1861 caccgacata aacgccagca cgcacttcaa gtagccagat tgcgagccgt ccacgtaagc
     1921 gcggcgggac attttctgta acaaccacga ccatactcat cagccgcgcc ctcgatgacc
     1981 gctatcgccc aacgtttcag gttcggggat ggctggcggt aacatatccg acgcaggttg
     2041 tggcggttca atttcacctg cggcaaggac ttgctcaatt aacggtatta atttgctcgt
     2101 taacttagtg ctacggaaaa tatcgcgaca ggccaacctg acttctttat ctggttctgc
     2161 gggttgcctc gccgctattt caaatgcctt tggtacaacc gaatcaaatt taatgatatc
     2221 ggctatgtca taaacaaatg aaagcggttt gccactatgg ataaatccaa tagcgggcgc
     2281 atatcccgca gctaatactg ccgcttcaga aataccgtac aggcatgatg tggcagcact
     2341 gatgcagcga ttgacaacat cgcctttttc ccagtcttta ggatcgtatt tgcgaccatt
     2401 ccatttcaca ccatattgtt tcgccagtaa tgcataggtc tggcgaacgc gggatccctc
     2461 aattccccgt agctgctcca ctgaacggcg agctgggggt ggctcacgaa aacgtaattc
     2521 atacattttg cgcaccacct tcagacgtag atcttccgtt aaagccagct ttgcctggta
     2581 gagtaactta tcagcacgcg ccccaccggg ttgtccggaa gagtagacgc gaacacccgc
     2641 ttcaccgacc cagaccagta gcgtccccac cgtggcggcc agatgcaccg ccgcgtggga
     2701 aactctcgtt cccggttcga gcataatgca ggcgaccgat cccaccggaa tgtgcgtgcg
     2761 gatcccggtt ttgtcgatca gcacgaaagc gccgtccagt acgtcgattt gaccgtactg
     2821 gcggaagatc atagaggtgc gatcttttaa cgggatcgga ctcagtggta caaacgtcac
     2881 gcctctgctc cgggtttgat cagcatcaga ccacagccga acgcgcggct tttgccatac
     2941 ccctggctca gacgttgcag aaataaccca ggatcggtga ccgtaagcat ccccgtataa
     3001 tccacgctac tgaactggat cagttgccgg gagttttccc gccgcagttg ctgttgtcgg
     3061 taggcatcga ccgaggtatc cagtagtgta aaaccacttc tttccccctg cgctgccagc
     3121 cagtccagcg ccgcctgttg ttgatgcaac cagacatcac ttccttccgc ctgtcccctc
     3181 acctgccgtt tcgcctccat cagcagatcg tggcgcttgc ccgctttaca gactgttgga
     3241 ttcgcccgca ggttaaaaca aagttgttgt ctggtacgca gctcgggcac aaatgaccgg
     3301 cattcgatgg tgaacgtttc actttccgcc gggcgttcct gcgacagtac aaaaaagcga
     3361 aacgcgccct ggagttcttc ccgacgataa agaaattgcc tttctttgcc gccagggaaa
     3421 agatcccaca gccactgatg catcacatat tccccgcgat ccaccagatg cagcaactgc
     3481 gcaggcaaaa gctggccggt gtgtaaggtt attcttgaga ggtacatggt tcctccttgc
     3541 tgagccacgg cccctggttg acagttcgtt ccccaaacag ccattgctga cgatttaaag
     3601 gaacatcccg gcggcgtaat attttgctcg cgaccaggcc gtcgtgcacc ccttcccacc
     3661 aacattcatc atgaagtttc gggagtgaga ctttcagttt gcggaaatga ttctgatact
     3721 gttggtatgc gttacgtaaa acatcagacg cgttgccttc gagcagtaac ggcgcaagtg
     3781 gtaatgccag cggatgactt tttcgcccca gataaaacgg aaaaaccgga tggcgtaaac
     3841 cttcctgcaa ctgttcgagg atgtaaggcg catcggctgt tgttgccacc gccaccatcc
     3901 accaggcgtc ggtgtagtag tcgcgccggg agataatcgc gctcaaaagc tcaggattgc
     3961 tcaactcttc gcgacggctg aaataacgtg ctttacgcac ctcttttggc atctggaccg
     4021 tgtgataatc ccgtgcccag cgcgggttac ggctggcgca aaccaccagt gaatagtggc
     4081 gattaaacgc gtttaatcgt tcggtatcat cgcgtcggat ccctaccccg gcagccagca
     4141 gccccagcaa tgctgagcgc gaaggcagtt catgggtatg acgcacttcg ccgggagcat
     4201 cgacacccta ggatgccatt ggcccatgaa gctgaaaaat cagatattgg ctcataagcc
     4261 gccccttacg cgcagataaa gtccagcacg tccttcatgc ttccctgttt gttcatcacg
     4321 tcaaaactta cgtattcggt cttctgttcg tagaccgtat tcatattttc gcgaagcgtt
     4381 gtaatacgct gcaccgccac atctaactga cgggtgccat taatgggttc atagaaagcc
     4441 gccgccagag agcgcggttg ttcggtacct ttttctgcca tcgcccagga ggcgtaggca
     4501 cggctggcaa agctgttctg tttgccggtt ggggagactt taagcgcggc ttccgtaaag
     4561 gcgcgtatgg tctgattagc taacgcttcg tcaccgccaa ggttttcgac cagcagatct
     4621 ttatcgatgc agatataggt gtagaacagc gcagaaccga atccggtttc accaagatgc
     4681 ccggcaccgg catcttcaga ggcctgccgc aaatcatcaa cggcggtgaa aaaatcatct
     4741 tcgacaatcg tttcactgac accaaacgca tgcgcgacct ggcaagcagc ttcaacatta
     4801 aactcgggtt tattcgccag catatgacca aacatagcga tatctaccgc tatacggtct
     4861 ttacgtaaca acgcgagatc ttcctctttt ggcgcgcgct tttcttctgc cagttgatgg
     4921 gccagcgctt ttacggcgtc aaattctgcc gggctgatat gaactaattg ttcagtttcg
     4981 gcgttagtga gcggatcttt tggttttttg tcgtttttag ctttcccaag ataatccgca
     5041 atttttgccg cccattcgat ggcttttttc tcttcgattc ctttctcaat caggatagtt
     5101 gctgcctcac gcgcgatacg cccactgcga ataccaatat ggcccgccag tgcctgttca
     5161 aatagtgcag aagtgcgcca tgcacgcttc agactttgcg aggaaacgcg cagacgcatt
     5221 gccccaccca gcaccacagt tttcggcgca ccggtatcat cacggttaag gttggctgca
     5281 gggtaagcgg ttaacaaatg aagctgaata aatgtcgtca tgagatagtc ctttattgat
     5341 tttgttcgtt atcggcgtcg ccagcctggt aatattccag cgcccagcgg atacggataa
     5401 attctgttgg ccgctgctgg cggcggtgat gattgagcag atcgtcgctc tcctggcacc
     5461 agcggaaaat atcgtctgct aaagagataa gattgacgga accatttaat aatttgaccg
     5521 cgcgacgtaa ctgacgcagt aaatcatccg gggtttttac tgccgacagg cgagtaaaac
     5581 gcccctcaga cattaccgcc gccagttgcg cggcaaaagg ctgccgttca tcaataactt
     5641 ttacattggc gctaactgcg gcgaccagcg ccagtgcggt aaaacgccac tcttgtgctt
     5701 caattttcca caaagtgtgg gtctgcatca gcagagaacg aaacccttct gacaagcaaa
     5761 catcattaac cgttgtgcta cgccgaagac tggcacgatt gccgcgttta gcctgcaact
     5821 cttcgtgcca tttacgcagc gtggctttgt gctcctcttt tacaatgctc attcaacagc
     5881 ctcctgcttt ttctccctgg cggctttagc attttgcttc tccgccgatg ttgtaaaata
     5941 tttcttgcgc gcggtcatga cgcgttttaa atcaacgggc tcataaggac tggtgaatac
     6001 acgctcgtca aaatcctgac gcgcgaataa ccacatttcc ttttgccatt tgccgagtaa
     6061 ttcatccgca tcctgaccgt cttcaatttg gcgcactaac ctcaggaagc gatgctgagt
     6121 tttgttccag aagtcgatat ccacaaaact gaaatcaccc cgtgtacctt ttggatcgga
     6181 gaaccatgct tctttcagtg cactccgtaa cagactcaga atccgtgaag ctgtttgcgc
     6241 agccagccgc agcttcggta tctggccttc ttttttattg agcagcagcg ggaaatggtg
     6301 ttcgtaccag cagcgcgctt tcatgttgtc gaaatcatag ccaaatcccc acaggcccac
     6361 ttttgcctgc ttgagactac tgggattaaa gagtttcacc accatcgcgg gaagctctgt
     6421 attgttttct gacttacccg tttcgataag gcctaaccag tcgcgccaga ttaaaccacc
     6481 cggttgtggt ttaacggagt aaaactcgcc gccctcttta agtggtacac ggtaaggcgt
     6541 taagggatgc tgccacatgg cataattcgc accgtaattt ctggtcgtca tcaggctcag
     6601 aagcgcgtcg ctctgctcac cacaaatatc gcagttgccg actgtggtgg tattaaaatc
     6661 aatacgaata cgccgcggca ttccccagta cgcctggagt ttattaacct gatcatcggt
     6721 taccaccgca ccggccagtt cgctggttcg cgtcgggcca agccagggga aaatcagatc
     6781 gtcaaatttt ttgggtagcg gtaagtcggc ttcatcctgc ggcatcacat tgagccacag
     6841 tttgcgccat aagggtgttt gttgattgcc ctgatattcc tgtaattcaa tcagagtggt
     6901 catcggccca ccgccgcgta aaccggtgcg gtagcctttg ccacctgacg gcgcatttaa
     6961 ctgtagggag aacagagcta acgcagaaca atgtgggcac aggtattccg ttacaccacg
     7021 cttaataaag tggtctttat taaacttcgt tgtttgagcg cagggaatct caggcagtaa
     7081 cgaagcgacc ggaactttat ctcccgtgag cacctcgaaa tcctgcataa atgaaggtga
     7141 gtccgggcca aactggaaag cgtgctctaa cgaccgcaat gcttcccgta gcttttcaga
     7201 ttccagtccg tcttcccaga tatcatccca acgacgataa tcttttggcg cgaagctggt
     7261 ttgtagtagc cccagcaaaa actgccacgc agctccctgg agatctgccc gcggcgcagc
     7321 gatatcgaca acattttcat ccgccagatc gactggcgcc agtttgcctg ttgttccgtc
     7381 tttaaaacga acgggcaacc acggggttgt cagaagtgaa aacgagttca tacgcatcct
     7441 ctcgtaaaaa agaccatccc aggtcggttg tccatcattc catccttttc ggtgtatcaa
     7501 ctattcagag agccctgtcg caggcatctc aaccaacctt gccagtcaat ccttccatag
     7561 ccgaatacac gcaactttcg tcatcggtga ctaaaatcac gtttgccatc tccggatctt
     7621 gccgctgttc aatgcaccac tgcctgaacg catccccttc cagtaaagaa aactcatccc
     7681 gatgtttttt ccaccagctt cgacgcactc tgacaacgct catttcccat gcgtgagcac
     7741 cggtagcata aggcttcacc acaccgtcaa tacaggtagc cagccacagg gaaacagact
     7801 cttcagccag acgtgtcgac agtttttccg gaaggtaatc gttgatactg gcggcatagc
     7861 cgggcctgaa gttcagcaca aactttttag ccattgtgcg atcgcagtaa tatttgccca
     7921 cttgctcctg ctcgctgcgg gcaaatcctt ccggcattac cacgtcctca ccgtaaactg
     7981 attcaataag aagccgggct gcgtgtggca tctgaatagc gccttgctca cgcagcacac
     8041 gctgcgtcag ccagattcgt ccatgatcgg ggtagacaaa tgcactgttc cgcatggctc
     8101 tgccaaacca ttcatcaccc ggagagtcgt cccagacggg tgccagaatc agcaattcag
     8161 gaggggaacg ctcgtctttt ccgtcacgct ttaactgacc attaatatcg cgaatatgcc
     8221 gctgtaatcg ccccactcac tgaatcagca aatcaacagg ggctaggtcg gagatcattt
     8281 cgtccaggtc acaatcaacg ctctgctcta agacctgagt acaaatgagg acttttccgg
     8341 cacgctgtga accgtcttct ttaccaaagc gtgccagcgt ctccatttca attcgctggc
     8401 gatcgctaaa agcaaagcgg ctatgaaaaa gtgaaaggct ggaagcagga atgacgccgc
     8461 gggaaagcag ctgacgataa acctgaatag cgtcatcaac agaattccga atccaggcga
     8521 tgcatttccc ctg
//
LOCUS       DAJVTL010000160         8528 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.162, whole genome shotgun sequence.
ACCESSION   DAJVTL010000160 DAJVTL010000000
VERSION     DAJVTL010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8528
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.162"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..844
                     /locus_tag="OQQ26_003773"
     CDS             <1..844
                     /locus_tag="OQQ26_003773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCS1859078.1"
                     /translation="LNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFA
                     YQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHG
                     ELAALAWEDVDFEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLT
                     GHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNEKQKPYYSVSSLGARWNAAVKRAGI
                     RRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLN
                     ARLS"
     gene            896..1831
                     /gene="ttcA"
                     /locus_tag="OQQ26_003774"
     CDS             896..1831
                     /gene="ttcA"
                     /locus_tag="OQQ26_003774"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HCS1859079.1"
                     /translation="MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHILPEYLEKLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGD
                     LAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK"
     gene            complement(1960..3333)
                     /gene="dbpA"
                     /locus_tag="OQQ26_003775"
     CDS             complement(1960..3333)
                     /gene="dbpA"
                     /locus_tag="OQQ26_003775"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HCS1859080.1"
                     /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR
                     VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
                     ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
                     MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQ
                     QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE
                     QRDRDQTLVRFANGSTRVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR
                     AGNSGLAISFCAPEEAQRANIISDMLQITLNWQTPPVNSSIVPLEAEMATLCIDGGKK
                     AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQDGKIKGKT
                     CRVRLLK"
     gene            complement(3811..4794)
                     /gene="zntB"
                     /locus_tag="OQQ26_003776"
     CDS             complement(3811..4794)
                     /gene="zntB"
                     /locus_tag="OQQ26_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HCS1859081.1"
                     /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
                     LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD
                     QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
                     FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
                     FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
     gene            5049..6281
                     /gene="dgcM"
                     /locus_tag="OQQ26_003777"
     CDS             5049..6281
                     /gene="dgcM"
                     /locus_tag="OQQ26_003777"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcM"
                     /protein_id="HCS1859082.1"
                     /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQ
                     LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVI
                     IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA
                     LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFIHKLADGSTRHVQ
                     TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM
                     QHLAIAQDYSLLLIDTDRLKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE
                     EFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRV
                     DDALYRAKNDGRNRVLAA"
     gene            complement(6302..6865)
                     /gene="smrA"
                     /locus_tag="OQQ26_003778"
     CDS             complement(6302..6865)
                     /gene="smrA"
                     /locus_tag="OQQ26_003778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HCS1859083.1"
                     /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL
                     DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMV
                     FSFIQQALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG
                     SGACYVALRKTAQAKQENWERHAKRSR"
     gene            complement(7268..8107)
                     /locus_tag="OQQ26_003779"
     CDS             complement(7268..8107)
                     /locus_tag="OQQ26_003779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005032737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1859084.1"
                     /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE
                     EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG
                     ASISRSLMPAVISRFHQQHPQVKKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH
                     EFTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQ
                     TPQVGVVCETFSACISLVAKSDFLSILPEEMGCDPLHGQGLVMLPVSEILPKAAYLFD
                     SAA"
     gene            8283..>8528
                     /locus_tag="OQQ26_003780"
     CDS             8283..>8528
                     /locus_tag="OQQ26_003780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309949.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M20"
                     /protein_id="HCS1859085.1"
                     /translation="MESLNQFVNSLASKLSHWRRDFHHYAESGWVEFRTATLVAEELQ
                     QLGYSLALGREVVNESSRMGLPDELTLQREFERARQQG"
BASE COUNT         2291 a         2122 c         2033 g         2082 t
ORIGIN      
        1 cttaaactac cggaatgaac tgctgcatgg agaaacgctt tacctagata atccaagatc
       61 caacaaaaaa ggaagaaccg tgcgcacagt tgataactat atcgccctgc tctgttcgtt
      121 gttacgtttt gcgtatcagt cgggatttat atcaaccaaa ccatttgaag gagtaaaaaa
      181 attacagcga aacagaataa agcctgaccc gttatctaaa acagaattca atgcattaat
      241 ggaaagtgaa aaaggacaga gccaaaactt gtggaaattt gccgtttact ccgggcttcg
      301 tcacggggaa ctggcagctc tggcgtggga ggatgtggat ttcgagaagg gaattgtgaa
      361 tgtcagaaga aacctgacga tacttgatat gttcggtccc ccaaaaacaa atgccgggat
      421 ccggacggta acattactgc agccggctct tgaagcactg aaggagcaat acaaactgac
      481 cgggcatcat cgcaaaagcg aaatcacttt ttatcatcgg gagtacggca gaactgaaaa
      541 gcaaaaactg cattttgttt tcatgcccag ggtgtgtaac gaaaaacaga aaccttatta
      601 ctcggtaagc agtttgggtg caagatggaa tgcagcagta aaacgtgctg gtattcgccg
      661 ccgtaatccg taccatacgc gacatacttt tgcctgctgg ctgttgacgg caggagcgaa
      721 cccggcattt atagccagcc agatggggca tgaaactgcg caaatggtgt atgaaattta
      781 cggtatgtgg attgatgaca tgaacgacga acagatagcc atgttgaatg cgcggttatc
      841 gtagttgcaa agtttgcccc caatttgccc catttagtac cagagaactg aaataatgca
      901 agaaaatcaa caaattacaa agaaagaaca atacaacctg aacaaattac aaaaacgtct
      961 gcgtcgtaac gtgggcgaag ccattgctga cttcaatatg attgaagaag gcgatcgcat
     1021 catggtttgc ctctccgggg gtaaagacag ctataccatg ctggagattc tgcgcaattt
     1081 gcagcaaagc gcgccaatca atttttcgct ggtggctgtt aacctcgatc aaaagcaacc
     1141 gggcttcccg gaacacattc tgcccgagta tcttgaaaag ctgggcgttg agtacaagat
     1201 tgttgaagag aacacttacg gtatcgtgaa agagaagatt ccagagggca aaaccacttg
     1261 ctcactgtgt tctcggctac gtcgcggtat cctttatcgc accgcaacgg aactgggggc
     1321 gacgaagatc gcgttgggtc accatcgtga cgatatcctg caaacgttgt tcttaaatat
     1381 gttctacggc ggcaagatga aaggtatgcc tccgaaactg atgagcgatg atggcaaaca
     1441 tatcgttatt cgtccgctgg cctactgccg cgagaaagat attcagcgat ttgccgatgc
     1501 aaaagcgttc ccgattattc cgtgcaacct gtgcggttca cagcctaacc tgcaacgtca
     1561 ggtaattgct gacatgttgc gtgactggga taaacgttat ccagggcgta tcgagacgat
     1621 gttcagcgcg atgcagaatg tggtgccgtc gcatctgtgc gataccaacc tgttcgattt
     1681 caaaggcatc acccacggtt ctgaagtggt taacgggggt gatctggcgt ttgatcgcga
     1741 agagatccca ctacaaccgg cgggctggca gcctgaagaa gatgaaaatc agttggatga
     1801 gttacggctg aatgtggttg aagtgaaata accaggatag cgcccgatgc gcaagcgtat
     1861 cgggctactc ttatggaggc cggataagac gcggtcagcg acgcatccgg caatgccgaa
     1921 gaagaagttt actcttgcac ccggcaattc aacatttcat tattttaata accgcacccg
     1981 gcacgttttt cctttaatct tcccgtcctg taactgtttc catgctttat gagcaacagc
     2041 ctgacggacc gcgacataga catgcgccgg atgcacggcg attttgccaa tatctgcgcc
     2101 atcaagcccg atatctcctg tcagtgcacc taatacatca cccgggcgca ttttggcttt
     2161 tttcccgcca tcaatacaca acgttgccat ttctgcttcc agcggcacaa tggaactatt
     2221 aactggcggt gtttgccagt taagtgttat ctgcaacatg tcagaaatga tattggcccg
     2281 ctgtgcttct tccggggcac agaaactgat cgccagaccg ctatttcctg cacgagctgt
     2341 acgaccgatg cgatgtacat gaacttcagg gtcccacgcc agctcaaagt tcaccaccag
     2401 ctcaagcgat tttatatcca gaccacgcgc agcaacatca gtcgcgacca gtacacgggt
     2461 gctaccgtta gcaaaacgta ccagggtctg atcgcgatcg cgttgctcca aatcgccgtg
     2521 taatgacaat gcactttgcc ctacttcatt cagcgcgtcg cagacagcct ggcaatcttt
     2581 tttggtattg caaaacacca cgcaagagga tggctgatgc aagcttaata accgttgcaa
     2641 cagaggaatt ttgcctttac tggatgtctc ataaaattgt tgttcaatgg gtggcaaagc
     2701 atctgttgag tcaatttcaa tcgccaaagg atcgcgttgc actcgtccgc tgattgcggc
     2761 gatggcttcc ggccaggttg ccgaaaacag aagcgtctgt cgagatgcag gcgcaaaacg
     2821 gatgacatca tcaatggcat cgctaaatcc catatccagc atgcggtcgg cctcatccat
     2881 caccaaagta ttcagcgcat ccagtgatac cgtgcctttt tgcaagtgat ccagcaaacg
     2941 acccggcgtt gccacgataa tatgcggcgc atgttgcaac gaatcacgct gcataccgaa
     3001 cggttgacca ccgcacaacg tcaaaatttt ggtatttggc agaaaacgcg ccagccgacg
     3061 caattcacct gccacctgat ccgccagttc acgcgtagga cacagcacta aagcctgggt
     3121 ttgaaatagc gacgcatcaa tttgctgtaa caagccgagg ccaaaagccg ccgttttgcc
     3181 gctgccggtt ttcgcctgca cgcgaacatc ttttccggca aggatcgccg gaagcgcggc
     3241 ggcctgcacc ggcgtcatgg ttaaataacc caactcatta aggttcgtga gttgggcggg
     3301 aggcaaaaca ttcagggtag aaaaagcggt cacaatctat tctcgtggtc atcgacgcaa
     3361 agttagcagg cgcgtatcct cgcagatcta cgctcacgat gcgacaattt aatcggttct
     3421 tcatcgggtg gtgggtcagg catgggttgc gggcgaggga tcggatcggg cactggaaca
     3481 ggatcgccag gaatcggttc agggacagga atttgcaaat aaataagtgt cgtcatattt
     3541 ccctccggtc attgggtgga ctcttaaagg gtagactctg ataaataaca ggcaaaaaaa
     3601 agccgactca tcaaagtcgg cgtcgtacga atcaattgtg ctatgcagta attcaaaaaa
     3661 ggaagtaaga caatatggag cgcaacgccc atcgcttgac gttgcattca cctgcaagaa
     3721 agatattgcc ctgaatgggt agagagttta ttgacttcgc tcaaactttg cggcgttttt
     3781 gtatacagat agccggaaaa atcgcttttg ttacaaccat ttactacgat gcaaccataa
     3841 agcaacacca ccaataagaa caactaacag aatacaaaag attgaaaatc cgaattgcca
     3901 cccgccgcca gggatcccac caaggttgac gccaaataac ccggtcagaa aggtactggg
     3961 taaaaagacc attgccatca acgacattgt ataggtacga cgagctaaat tttcctgcat
     4021 cacctgagcg atttcatccg ccatcacgcc agtccgtgct atacaggcgt cgatttcgtc
     4081 aaggccgcgc ccaaggcgat cggcaatatc ctgcatccga cggcgttggt catcgctcat
     4141 ccacggcaaa cgttcactgg caagacgagc atagacatca cgttgcggtg ccatatagcg
     4201 acgcatcaca attaattgtt tgcgcagcag agccaggaat ccacgtggcg gaatttgctg
     4261 atcaaggaga ttatcttcaa ggtcgataat tttatcgtgc agctgctcga taaattcgct
     4321 tgaatgatcg gtcaacgcat cgcacacatc caccagccac cctccgcaat cggtcggacc
     4381 cgtgccctct tccagatcgc tcaccacatc gtccagcgcc aacactttgc gttgtcgggt
     4441 cgaaacaatt aaccgcccgt ccatatatac acgcatggcg accagttgat cggggcgttc
     4501 atcggtgctg ccgtttatac agcgcaatgt aatcagcgtg ccttcaccga gacggctgac
     4561 tcggggccgt gtgctctcgc ccgccagcgc atcacgtacg ttattgggaa gcagcggtgt
     4621 tgtcgccagc cattgggcgc tatcatggtg tacataatta aggtggagcc agcagggatg
     4681 cgcttcatca atcacatctg tattttccag cggtttaacg ccgcctctac catccagcat
     4741 ccaggcaaat actgcatccg ggacattaac gtccgatccc ttaatcgctt ccacagtgcc
     4801 tccatcatca acgcattatt ttgtagtcta gccttctggc cctgttacgc aacatctcat
     4861 caccccatta ccctgaaatg attaataaaa ttctgtctaa attgaataca aaaagcaaaa
     4921 tgcttttccg tatacaaacc gtgtgaagtg ttaaatagcg tctatcatta tcagaattat
     4981 ctgatcatat gacgtgactt tattgcgatc ggatagcaac aaaaattgat aaaaataatg
     5041 ggatctcaat gattacgcac aacttcaata ccctggactt actcaccagt cctgtctgga
     5101 tcgtttcgcc ctttgaggaa cagttaattt atgccaatag cgcggcgcga ctgttgatgc
     5161 aagacctcac gtttagtcag ctacgaaccg gtccctattc cgtctcctca caaaaagaac
     5221 tgccgaaata cctctccgat ctgcaaaacc aacacgatat tatcgaaatc ctcactgttc
     5281 agcgtaaaga agaggaaaca gcattaagct gtcggcttgt tttgcgagag ctgacagaaa
     5341 cagaaccggt gattattttc gaaggtatcg aagcgccggc aacgctgggt ttaaaagcca
     5401 gtcgctcggc aaattatcag cgcaaaaaac aaggttttta tgcgcgcttt tttctgacta
     5461 actctgcacc aatgttgttg attgacccgt cacgagatgg acaaatcgtc gatgctaacc
     5521 tcgccgcgct caatttctat ggttataacc atgaaacgat gtgccagaaa catacatggg
     5581 aaataaatat gctcgggcgt cgcgtcatgc ctatcatgca tgaaatctcg catttacccg
     5641 gtggtcataa acctctgaat tttattcata agctggcgga tggttcgact cgtcatgtgc
     5701 agacctacgc cgggccgatt gaaatttatg gcgacaagct catgttatgt attgtgcatg
     5761 atattactga gcaaaaacgg ctggaggagc agctggaaca tgctgcccac catgacgcga
     5821 tgaccggatt actgaatcgg cgacagtttt atcacattac cgagccaggc caaatgcagc
     5881 atctcgccat cgcccaggat tacagcttgt tgctcatcga caccgatcgt cttaaacaca
     5941 ttaacgatct ctatgggcat tctaaaggtg atgaggtgtt atgcgccctc gcccgcaccc
     6001 tcgaaagttg cgctcgcaaa ggcgatttgg tgtttcgttg gggaggcgaa gagtttgtct
     6061 tattgctacc aagaacccca ctggataccg cgctttcgct ggctgaaact atccgcgtaa
     6121 gcgtggcaaa agtgagtatt tcgggcttac cacgctttac cgtcagcatt ggtgtggcgc
     6181 atcacgaagg aaatgaaagc atcgatgaac tgtttaaacg cgttgatgat gctttgtatc
     6241 gggcgaaaaa tgatggacgc aaccgcgtgc tggcggcata agccgcggat gcgtctcgag
     6301 atcaacgact gcgcttagcg tggcgctccc agttttcttg cttcgcctgc gccgttttac
     6361 gtagtgcgac gtaacacgcc ccgctgccgc catgatgcgg tagcgcggtg caatatgcct
     6421 gaacatcatc aaattcggtc agccagcgcg ccacatagct gcggacaata ttggcatgcg
     6481 atttatcatc ccgcccttta ccatgaataa tcagcacgtt acgcaaacca tccgccaggg
     6541 cttgttgaat aaaactgaac accattttgc ggcactcttc caccggctgg cgcaaaagat
     6601 tcaggctcgc ctgttgcgga tatttaccac tgcgcagctt atccagcacc ccatgttgca
     6661 acccttcccg ccgaaactcc agcggctgac ttagcgggat gatgtcgaga aatccggtgg
     6721 tgaggaaatt atcaagttgc agcgtgtcga tacgctgcgg cgcacgttgg ttacgcgttg
     6781 gatgccagtg gacatcggta gcacgtttca gcggctggac atcttccatg gcgtcaagga
     6841 acagcgattt gtcgtcaagg ttcatgttac atcctcccgc aattaagagc gcgatatgat
     6901 aaccagaccg ggtcggtcca acaacgtatt acccaaattt ccagtaataa gttccaaata
     6961 ttgccgatat tttaagcaaa atacttatgc atgattattc attcacgata ttaataatgt
     7021 aacttatatt ttcgtgaaat ctgtcactga agaaaattgg caactaaagg ttaaaaccgt
     7081 tataacacag tcaccggcgc agaggagaca atgccggatt taagacgcgg atgcactgct
     7141 gtgtgtactg tagagtctgg cggatgtcga cagactctat ttttttatgc agttttaact
     7201 ttgcagatag ccgcattctc gccggaattg cgtgattaat gacgcggtca gtggtgtctg
     7261 gcgactatca cgccgctgaa tcaaataaat aggccgcttt cggtaaaatt tcgctaaccg
     7321 gcaacatcac cagcccctgt ccgtgcaagg gatcgcagcc catttcttca ggcagtatgc
     7381 tgagaaaatc gctttttgcc accagactga tacaggctga gaacgtctcg cagactacac
     7441 cgacctgtgg cgtttgcgcc tgatcgtcaa gcaattcact caactgtttg tagtaactgc
     7501 cgtgtggcgt cggcattgtc caactgtaat ccagtaactg tttgatcgaa cgggcaccaa
     7561 tggcggggtg tcccgggcgg caaaagatcg cgaattgctt ttccagtaat ttctcaaaag
     7621 taaattcgtg gtcgtacggt ccctgataat aggtattgat ggtgaaatcc aattctccct
     7681 gacgcaattc attaatcatc gacaccagtt gcccttccat aatgcgtact ttttttacct
     7741 gcggatgctg ctgatgaaaa cgagatatga cagctggcat cagactgcgg gaaatactgg
     7801 cccccatgcc gatattaatc tgccctgcca gttgcccttg tcgttggcga atatcctctt
     7861 gggctgcgcg cagctcttca agaataagac tggcgtgctg ataaaaactt tcaccggcat
     7921 cagttaacgt cacgccttta ctacggcgaa aaaagagttg cgccgctaat ccttcttcca
     7981 gctcctgaat agatttactc agtgccggtt gcgacatatt caacattcgg ctcgctccgc
     8041 gaatgctgcc ctgacgagcc acttcaacaa aagcccgaat ttgatgaatt tttacctgaa
     8101 aagccatgac gccaccgata accgttattt atcagaccaa agaaactggc atctacttta
     8161 atgcagatga ttgtgtcagg gtaatttatg aacggttaaa actgtgaaaa atcagttagt
     8221 gataagtaaa aactatcgct acgtgaaccg ggtcacactt tttactgatg acgggaaagg
     8281 ttatggagtc tttgaatcaa tttgttaatt cgcttgcctc aaaattatcg cactggcgac
     8341 gtgattttca tcactatgca gagtctggct gggtggaatt ccgcactgcc acccttgttg
     8401 cggaagaatt gcagcagctc ggctattcac tggcgctggg ccgcgaagta gttaatgaaa
     8461 gtagccggat gggactacct gatgaactca ctctacaacg cgaattcgag cgcgctcgtc
     8521 aacagggt
//
LOCUS       DAJVTL010000161         8499 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.163, whole genome shotgun sequence.
ACCESSION   DAJVTL010000161 DAJVTL010000000
VERSION     DAJVTL010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8499
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.163"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..236
                     /locus_tag="OQQ26_003781"
     CDS             <1..236
                     /locus_tag="OQQ26_003781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859086.1"
                     /translation="INKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGK
                     AFMLRGGTLNINIPGRSALLLGKTGQPPNYLYL"
     gene            572..1549
                     /gene="csiD"
                     /locus_tag="OQQ26_003782"
     CDS             572..1549
                     /gene="csiD"
                     /locus_tag="OQQ26_003782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HCS1859087.1"
                     /translation="MNALTAVQNNAVDSGQDYSGFTFIPSAQSPPLLELTFTEQTTKQ
                     FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGV
                     DDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
                     SKNVSKDVFHPVFDVDQQGRPMMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
                     VPVGKFLLINNLFWLHGRDRFTPQPDLRRELMRQRGYFAYASNHYQTHQ"
     gene            1569..2837
                     /gene="lhgO"
                     /locus_tag="OQQ26_003783"
                     /pseudo
     CDS             1569..2837
                     /gene="lhgO"
                     /locus_tag="OQQ26_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311548.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
     gene            2860..4308
                     /gene="gabD"
                     /locus_tag="OQQ26_003784"
     CDS             2860..4308
                     /gene="gabD"
                     /locus_tag="OQQ26_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HCS1859088.1"
                     /translation="MKLNDSKLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSIPK
                     MGADETRAAIDAANRALSAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPL
                     AEAKGEISYAASFIEWFAEEGKRIYGDTIPDHQADKRLIVIKQPIGVTAAITPWNFPA
                     AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGN
                     ELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG
                     ALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDE
                     KAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVGVPADAKVSKEETFGPLA
                     PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA
                     PFGGIKASGLGREGSKYGIEDYLEIKYMCIGL"
     gene            4322..5602
                     /gene="gabT"
                     /locus_tag="OQQ26_003785"
     CDS             4322..5602
                     /gene="gabT"
                     /locus_tag="OQQ26_003785"
                     /EC_number="2.6.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HCS1859089.1"
                     /translation="MSNNKELIQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYL
                     DFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFA
                     KKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLTLTGKVNPYSAGMG
                     LMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAAS
                     PAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPL
                     AGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDG
                     LLAIAEKHPEIGDVRGQGAMIAIELFEDGDHSKPDAKLTAEIVARARDKGLILLSCGP
                     YYNVLRILVPLTIEDAQIRQGLEIISQCFAEAKQ"
     gene            5913..7313
                     /gene="gabP"
                     /locus_tag="OQQ26_003786"
                     /pseudo
     CDS             5913..7313
                     /gene="gabP"
                     /locus_tag="OQQ26_003786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417149.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
     gene            7334..7996
                     /gene="csiR"
                     /locus_tag="OQQ26_003787"
     CDS             7334..7996
                     /gene="csiR"
                     /locus_tag="OQQ26_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HCS1859090.1"
                     /translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
                     EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEA
                     DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
                     YRFIWLRQTVLSVEMLEDKHDQHQTLTAAVLVRDTARASELMRQHLLTPIPIIQQAMA
                     GN"
     gene            complement(7997..8446)
                     /gene="kbp"
                     /locus_tag="OQQ26_003788"
     CDS             complement(7997..8446)
                     /gene="kbp"
                     /locus_tag="OQQ26_003788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium binding protein Kbp"
                     /protein_id="HCS1859091.1"
                     /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLNKTGIPDAD
                     KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
                     SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
BASE COUNT         1945 a         2210 c         2346 g         1998 t
ORIGIN      
        1 taataaataa aggaaacgaa gaagttgaag gtacctggcc taacaaattg caaccaggaa
       61 tatataaaaa catggggagt aatagcgtta acattattat taataacacc cgaaaaatta
      121 tcccccctgg taaagcattt atgcttagag gcggaactct aaatatcaat attcctgggc
      181 gtagcgctct tcttttaggg aaaactggac aaccgccgaa ctatctctat ttataattta
      241 atgttatatc tgccccgata aaacggggca gataatatgt ttagtttact aacggtcatt
      301 ttgcagtgaa gccatttact gttttttatc gaccagataa tctgttctct gatggtaacg
      361 ccccctaacc tgttgcttta gttattcatt tcctgtctca cttcgcctta ataccctacg
      421 ttaaatgtta ctaatttgtt gtttttgatc acaataagaa aacaatatgt cgcttttgtg
      481 cgcatttttc agaaatgtag atatttttag attatggcta cgaaatgagc atcgccatgt
      541 caccctacat ctcataagag gatcgcttct gatgaatgca ctgaccgccg tacaaaataa
      601 cgctgtcgat tcaggccagg actatagcgg attcactttc atcccgtcgg cgcaatcccc
      661 gcctctgctg gaacttacct tcaccgaaca gacgaccaaa cagtttctcg aacaggttgc
      721 cgaatggccc gtacaggcgc tggagtacaa atcgtttctg cgttttcggg taggcaaaat
      781 tcttgatgat ctgtgtgcga atcagctgca accgttgctg ttgaagaccc tgctaaaccg
      841 cgctgaaggt gcgttgttga tcaatgcggt gggggtcgat gatgtgaagc aagcggatga
      901 gatggtgaag ctggcaacgg cggtggcgca tctgattggt cgctccaatt tcgacgcgat
      961 gagcggtcag tattacgcgc gttttgtagt gaaaaatgtc gataactcag acagctatct
     1021 gcgtcagccg caccgcgtga tggagctgca caacgacggc acctacgtgg aagagatcac
     1081 cgactatgtg ctgatgatga aaatcgacga gcaaaacatg cagggcggaa attcgctgct
     1141 gctgcatctc gacgactggg aacatctcga ccactatttc cgccacccgc tggcgcgtcg
     1201 cccgatgcgc tttgccgcgc cgccaagcaa aaacgtcagc aaagatgttt tccatccggt
     1261 gttcgacgtt gatcagcagg gtcgcccgat gatgcgctat atcgaccagt tcgtccagcc
     1321 gaaagacttc gaagaaggcg tgtggttgag cgagctttcg gacgccattg aaaccagtaa
     1381 aggcattctt tctgtacccg ttcccgttgg caaattcctg ttgattaaca acctgttctg
     1441 gctgcacggt cgcgaccgct ttactccgca gccggatctg cgccgtgaac tgatgcgtca
     1501 gcgtggctat ttcgcttacg cctctaacca ctaccagacg catcagtaag cgcaaaggaa
     1561 ttgagcggat gtatgatttt gtgattattg gcggcggcat catcggcatg tcgaccgcca
     1621 tgcaactgat tgatgtctat ccggacgcac gcattgcgtt gctggaaaaa gagtccggcc
     1681 cggcctgtca ccaaacgggc cacaacagtg gcgtgatcca tgccggggtt tattacacgc
     1741 ccggtagcct gaaggcacag ttttgccagg cgggaaaccg cgccactaaa gccttttgcg
     1801 atcaaaacgg cattcgctat gacaactgcg gcaagatgct ggtcgccacc tctgaactcg
     1861 aaatggaacg gatgcgcgcg ttgtgggaac gcacggcggc aaacggtatc gagcgcgagt
     1921 ggttaaacgc cgtggaactg cgcgagcgcg aaccgaatat caccgggctt ggcggcattt
     1981 ttgtgccgtc cagcggcatt gtcagctacc acgaagtcac agcggcgatg gcaaaaattt
     2041 tccaggctag aggcggtgag attatctata acgccgaagt cagcggcctc agtgagcata
     2101 aaaacggcgt ggtgatacgt acccgtcagg gcggtgaata tgaagcatcg acgctgatta
     2161 gctgttccgg gctgatggct gaccggctgg tgaaaatgct cggcctcgaa ccgggcttta
     2221 ttatctgccc gttccgtggc gagtatttcc gccttgcgcc ggagcataac cagattgtta
     2281 accacctgat ttaccccatt cccgaccccg cgatgccatt tttgggcgtg catctcaccc
     2341 gcatgatcga cggcagcgtg accgtcgggc caaacgcggt gctggctttc aaacgcgaag
     2401 gctatcgcaa gcgcgacttc tcatttagcg acacgctgga gattttgggc tcgtcgggga
     2461 ttcgccgggt gctgcaaaac catctacgct caggactggg cgagatgaaa aactcgctgt
     2521 gcaaaagcgg ctatctgcgg ctggtgcaaa agtattgtcc ccggctttcg ttaagcgatc
     2581 tccagcccta gcccgccggt gtgcgggtgc aggcggtatc gccggacggc aagctgattg
     2641 acgattttct gtttgtcacc accccgcgca cgatccacac ctgcaacgcg ccctccccgg
     2701 cagcgacatc agcaattcct attggtgcgc atattgtcag caaggtacaa acgctgttgg
     2761 caagccagag taaccccgga cgcacgctgc gagcggcacg tagtgtggat gccttacacg
     2821 ccgcatttaa tcaataacct ttgaaaacag gacgtaacaa tgaaacttaa cgacagtaaa
     2881 ttattccgcc agcaagcgtt gattaacggg gaatggctgg acgccaacaa tggtgaagtc
     2941 atcgacgtca ccaatccggc gaacggcgac aagctgggta gcatacccaa aatgggcgct
     3001 gatgaaaccc gcgcggctat cgacgccgcc aaccgcgccc tgtccgcctg gcgtgcgctc
     3061 accgccaaag aacgcgccac cattctgcgc aactggttca atttgatgat ggagcatcag
     3121 gacgatttag cgcgcctgat gaccctcgaa cagggcaaac cgctggctga agcgaaaggc
     3181 gaaatcagct acgccgcctc ttttattgag tggtttgccg aagaaggcaa acgcatttat
     3241 ggcgacacca ttcccgatca tcaggccgat aagcgcctga ttgttatcaa acagccgatt
     3301 ggcgtcaccg ccgccatcac gccgtggaac tttccggcgg cgatgattac ccgtaaagcc
     3361 ggtccggcgc tggcggcagg ctgcaccatg gtgctgaagc ccgccagtca gacaccgttc
     3421 tctgcgctgg cgctggcgga actggcgatt cgcgcgggca ttccggctgg cgtatttaac
     3481 gtggtcaccg gttcggcggg cgcggtcggt aacgaactga ccagcaaccc actggtacgc
     3541 aaactgtcgt ttaccggctc gaccgaaatt ggccgccagt taatggaaca gtgcgcgaaa
     3601 gacatcaaaa aagtgtcgct ggagctgggc ggcaacgcgc cgtttatcgt ctttgatgat
     3661 gccgatctcg acaaagccgt ggaaggcgca ctggcctcga aattccgcaa cgccgggcaa
     3721 acctgcgtct gcgccaaccg tttatacgtg caggacggcg tatatgaccg ctttgccgaa
     3781 aaattgcagc aggcggtgag caaactgcac atcggcgacg ggctggataa cggcgtcacc
     3841 atcgggccgc tgatcgatga aaaagcggta gcaaaagtgg aagagcatat tgccgatgcg
     3901 ctggagaaag gcgcgcgcgt ggtttgcggc ggtaaagcac acgaacgcgg cggcaacttc
     3961 ttccagccga ccattctggt gggcgttccg gccgacgcca aagtgtcgaa agaagagacg
     4021 tttggccccc tcgccccgct gttccgcttt aaagatgaag ctgatgtgat tgcgcaagcc
     4081 aatgacaccg aatttggcct tgccgcctat ttctacgccc gtgatttaag ccgcgtcttc
     4141 cgcgtgggcg aagcgctgga gtacggcatc gtcggcatca acaccggcat tatttccaat
     4201 gaagtggccc cgttcggcgg cattaaagcc tcggggctgg gtcgtgaagg ttcgaagtat
     4261 ggcatcgaag attacttaga aatcaaatat atgtgcatcg gtctttaact ggagaacgcg
     4321 aatgagcaac aataaagagt taatacagcg ccgcagtcag gcgattcccc gtggcgttgg
     4381 gcaaattcac ccgattttcg ctgaccgcgc ggaaaactgc cgggtgtggg acgttgaagg
     4441 ccgtgagtat cttgatttcg cgggcgggat tgcggtgctc aataccgggc acctgcatcc
     4501 gaaagtggtt gcggcagtgg aagcgcagtt gaaaaaactg tcgcacacct gcttccaggt
     4561 gctggcttac gagccgtatc tggagctgtg cgagattatg aatcagaagg tgccgggcga
     4621 tttcgccaag aaaacgctgc tggttacgac cggttccgaa gcggtggaaa acgcggtaaa
     4681 aatcgcccgc gccgccacca aacgtagcgg caccatcgct tttagcggcg cgtatcacgg
     4741 gcgcacgcat tacacgctga cgctgaccgg caaggtgaat ccgtactctg cgggcatggg
     4801 gctgatgccg ggtcatgttt atcgcgcgct ttatccttgc ccgctgcacg gcataagcga
     4861 ggatgacgct atcgccagca tccaccggat cttcaaaaat gatgccgcgc cggaagatat
     4921 cgccgccatc gtgattgagc cggttcaggg cgaaggcggt ttctacgccg cgtcgccagc
     4981 ctttatgcag cgtttacgcg ctctgtgtga cgagcacggg atcatgctga ttgccgatga
     5041 agtgcagagc ggcgcagggc gtaccggcac gctgtttgcg atggagcaga tgggcgtggc
     5101 gccggatctt accacctttg cgaaatcgat cgcaggcggt ttcccgctgg cgggcgtcac
     5161 cgggcgcgcg gaagtgatgg acgctgttgc accgggcggt ctgggcggca cctatgccgg
     5221 taacccgatt gcctgcgtgg ctgcgctgga agtgttgaag gtgttcgagc aggaaaatct
     5281 gctgcaaaaa gccaacgatc tggggcagaa gctaaaagac ggattgctgg cgatagccga
     5341 aaaacacccg gagatcggcg acgtacgcgg gcagggagcg atgattgcca tcgagctgtt
     5401 tgaagatggc gatcacagca aaccggacgc aaaactcacc gccgagatcg tggcacgcgc
     5461 ccgcgataag ggcctgattc ttctctcctg cggcccgtat tacaacgtgc tgcgcatcct
     5521 tgtaccgctc accattgaag acgctcagat ccgtcagggt ctggagatca tcagccagtg
     5581 ttttgctgag gcgaagcagt agctatgtcc gtttgtaaga gttaaccgtt gctaagggaa
     5641 tgataacgat gcagtaaaaa ataataacga tgaggcgaac gacaaagtta aaaacgactg
     5701 cggacagtcc cctcgcccct ctggggagag ggttagggtg aggggtaaaa cacgcggcta
     5761 aaccctcccc tggccctctc cctaagggag agggagaaaa ccctcccgct ttcgttttta
     5821 agattttgtt gaccgtctca attaaacgcg tgacccgacg cgggaaatgt cggggcgctc
     5881 tcccaagtga cacactttcg agaggattca ggatggggca atcatcgcaa ccacatgagt
     5941 taggcggcgg gctgaagtca cgccacgtca ccatgttgtc tattgccggt gttatcggcg
     6001 caagtctgtt tgtcggttcc agcgttgcca tcgccgaagc gggcccggcg gtattactgg
     6061 cctatctgtt cgccggatta ctggtggtta tgattatgcg gatgctggcg gaaatggcag
     6121 ttgccacgcc cgataccggt tcgttttcca cctatgccga taaagccatt ggccgctggg
     6181 cgggctatac catcggctgg ctgtactggt ggttttgggt actggttatc ccgctggaag
     6241 ccaacatcgc cgctatgatc ctgcactcgt gggttccagg cattcccatc tggttatttt
     6301 ccctcgtcat taccctcgcc ttaactggca gtaatttatt aagcgttaaa aactacggcg
     6361 aatttgagtt ctggctggcg ctgtgcaaag tcatcgctat cctggccttt attttccttg
     6421 gtgcagtcgc aattagcggt ttttaccctt atgccgaagt gagcgggatc tcaagattgt
     6481 gggatagcgg cggctttatg cccaacggtt tcggtgcggt attaagcgcg atgttgatca
     6541 ccatgttctc gtttatgggc gcagaaattg tcaccattgc cgccgcggaa tccgacacgc
     6601 cggaaaaaca tattgtccgc gccactaact cggttatctg gcgtatttct atcttctatt
     6661 tgtgctctat ttttgtcgtc gtggcattaa ttccgtggaa tatgcccgga ctaaaagccg
     6721 tcggttctta tcgctcggta ctggaattgc tcaatattcc ccatgcgaaa ttaatcatgg
     6781 actgtgtgat attactttcc gtaaccagct gcctgaactc ggcgctgtat accgcttcca
     6841 ggatgctcta ctccttaagc cgtcgcggag atgcgcctgc ggtaatgggt aaaatcaacc
     6901 gcagtaaaac cccgtacgtg gcggtgttac tctccaccgg cgcggcattc ttaacggtgg
     6961 tggtgaacta ttacgcgcct gcgaaggtat ttaaatttct gatcgacagc tccggcgcta
     7021 tcgccctgct ggtttattta gtcatcgccg tttcacagtt gcggatgcgc aaaattctgc
     7081 gagcagaagg aagcgaaatt cgcttgcgca tgtggcttta tccgtggctc acctagctgg
     7141 tcatcggctt tattaccttt gtgttggtag tgatgctatt ccgtccggcg caacagttag
     7201 aagtgatctc caccggctta ttagcgatag ggattatctg taccgtgccg attatggcgc
     7261 gctggaaaaa gctggtattg tggcaaaaaa cacccgttca taatacgcgc tgataatgat
     7321 caggagtcac accatgacca ttacgtctct ggatggctat cgctggctga agaacgatat
     7381 tattcgcggt aattttcaac cggatgaaaa attacggatg agtttgctga catcgcgtta
     7441 tgcacttggc gttgggccgt tacgggaagc tctttcgcaa ctggtggcgg aacggctggt
     7501 cacggtggtg aatcaaaaag ggtatcgggt ggcgtctatg tcagagcagg agctgctcga
     7561 tattttcgac gcccgcgcca atatggaagc gatgttagtg agtctggcga ttgcccgcgg
     7621 tggggatgag tgggaggcag acgttctcgc aaaagcgcat ctgctcagta aacttgaggc
     7681 ctgtgacgcc agtgagaaaa tgcttgatga gtgggatctg cgtcatcagg cgtttcatac
     7741 agcaattgtg gcgggctgtg gttctcacta tttgctgcaa atgcgtgaac ggttgtttga
     7801 tctggcggcg cgctatcgat ttatctggct gcgacaaaca gtgctttcgg tggaaatgct
     7861 ggaggataaa cacgatcagc accagaccct gactgcggcg gtactggtgc gagataccgc
     7921 gcgcgccagt gagttaatgc gccagcattt actgacgcca attcccatta tccagcaggc
     7981 gatggctggc aattaactac tcttcaggaa tacgcaacac ttgccccggg taaattttat
     8041 ccgggctttt taacatcggt ttattcgctt cgaagatttt attgtacaga ttggcgttac
     8101 cgtagacctg tttggaaatg gcactcagag tgtcgccaga cttaacggta taaaactggc
     8161 tggcagtggc tggtgtcgcc gttttcacct gatcatcgac actggcaata ccggaaatat
     8221 tccccaccgc aacaaggatt ttctccttcg cctcctgact caggccatca ccagtgaccg
     8281 tcgctttgcc gtcggcaatt tgaatattca ctttatcggc atcaggtata ccggttttgt
     8341 tcagatgctc ctgcaccttc ttcgcctgat cgtctttatc gtgctgacct gtaaccgcgt
     8401 cccagagttt ttctccggca tctttcacaa aattgaacag acccatagct acctcattcg
     8461 ttaacggaaa cactcagaaa gtggcggcgc gttaacgcc
//
LOCUS       DAJVTL010000162         8494 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.164, whole genome shotgun sequence.
ACCESSION   DAJVTL010000162 DAJVTL010000000
VERSION     DAJVTL010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8494
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.164"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            377..1201
                     /gene="gadX"
                     /locus_tag="OQQ26_003789"
     CDS             377..1201
                     /gene="gadX"
                     /locus_tag="OQQ26_003789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadX"
                     /protein_id="HCS1859092.1"
                     /translation="MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV
                     DKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQ
                     NKNLRYAEMLRKRALIFALLSVFLDDDHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT
                     LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY
                     HSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQGNFYGTNRSAEGIRL"
     gene            1568..2296
                     /gene="gadW"
                     /locus_tag="OQQ26_003790"
     CDS             1568..2296
                     /gene="gadW"
                     /locus_tag="OQQ26_003790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadW"
                     /protein_id="HCS1859093.1"
                     /translation="MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFC
                     SPDMRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
                     VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
                     RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
                     INTFRQYYGVTPHQFAQHSPGTFS"
     gene            complement(2659..5772)
                     /locus_tag="OQQ26_003791"
     CDS             complement(2659..5772)
                     /locus_tag="OQQ26_003791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HCS1859094.1"
                     /translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
                     VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
                     AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
                     NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
                     LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
                     TVARYNGKPAAGIAIKLATGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
                     ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKETTHKSMGQIQRALVGIAVVLS
                     AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
                     ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
                     QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
                     AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
                     LDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
                     LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
                     LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
                     WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
                     DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEEKTPIEAIIEAARMRLRP
                     ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
                     FARFKKA"
     gene            complement(5797..6954)
                     /gene="mdtE"
                     /locus_tag="OQQ26_003792"
     CDS             complement(5797..6954)
                     /gene="mdtE"
                     /locus_tag="OQQ26_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtE"
                     /protein_id="HCS1859095.1"
                     /translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPG
                     SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
                     SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
                     EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
                     FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
                     PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
                     ASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
     gene            7014..7292
                     /locus_tag="OQQ26_003793"
     CDS             7014..7292
                     /locus_tag="OQQ26_003793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859096.1"
                     /translation="MRDLQTSGIVGLSASKVGYRHSDRHCEVNDKKNVAVLPTVPASI
                     RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
     gene            complement(7293..7820)
                     /gene="gadE"
                     /locus_tag="OQQ26_003794"
     CDS             complement(7293..7820)
                     /gene="gadE"
                     /locus_tag="OQQ26_003794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadE"
                     /protein_id="HCS1859097.1"
                     /translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
                     IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
                     YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKL
                     RRMSDIVTLGITSYF"
BASE COUNT         2241 a         1948 c         1967 g         2338 t
ORIGIN      
        1 acctgataac ataacgttgt aaaaaccgaa tgcccagcct ttaaaaaaaa cagctgggca
       61 ttcggttgct tattaatcgc aataatatat tggctgtcta ttcatcgtgt tgataagata
      121 tatgttatat gaatgtttat taaatgtagc gattaccttt aatgtcacga aaagggatta
      181 tttgcttgct attaatttca ctgcgttctt aaacacgttt ttgtattata aatccagtca
      241 tcctgcccgt agaacatcac acattatcat cctgttctcc cgcttcgttt aaatttattt
      301 atcaatcaat ttgacttaag agggcggcgt gctacattaa ttaacagtaa tatgtttatg
      361 taatattaag tcaactatgc aatcattaca tgggaattgt ctaattgcgt acgcaagaca
      421 taaatatatt ctcaccatgg ttaatggtga atatcgctat tttaatggcg gtgacctggt
      481 ttttgcggat gcaagccaaa ttcgagtaga taagtgtgtt gaaaattttg tattagtatc
      541 aagggatacg ctttcattat ttctcccgat gctcaaggag gaggcattaa atcttcatgc
      601 acataaaaaa atttcttcat tactcgttca tcactgtagc agagatattc ctgtttttca
      661 ggaagttgcg caactatcgc agaataagaa tcttcgctat gcagaaatgc tacgtaaaag
      721 agcattaatc tttgcgttgt tatctgtttt tcttgacgat gatcacttta taccgctgct
      781 tctgaacgtt ttacaaccga acatgcgaac acgagtttgt acggttatca ataataatat
      841 cgctcatgag tggacactag cccgaatcgc cagcgagctg ttgatgagtc caagtctgtt
      901 aaagaaaaaa ttgcgcgaag aagagacatc atattcacag ttgcttactg agtgtagaat
      961 gcaacgtgct ttgcaactta ttgttataca tggattttca attaagcgag tcgcagtgtc
     1021 ctgtggatat cacagcgtgt cgtatttcat ttacgtcttt cgaaattatt atgggatgac
     1081 gcccacagag tatcaggagc gatcggcgca gggattgccg aaccgtgact cggcggcaag
     1141 tattgttgcg caagggaatt tttacggcac taaccgttct gcggaaggaa taagattata
     1201 gagttttact cagacataaa aaaacccggc ataggggacc gggaagagga tagtctgccg
     1261 tctccagact aataaaccgt tataacactc cctgttggca cgggaaactt tgtgctctca
     1321 gtaagttaaa tataactttt actggaaata agatcagcca tttttttata aacataagct
     1381 atacgctgtg cgaaaatata ttcgtgctgc atttacttat tatcaattaa ctgttatgca
     1441 aaactacttt gtgaataaat tttggtccta ccaaatctgg cagtttttgc gctaagaaac
     1501 agtctggcat catttcatta gtatactgaa attgaaataa tcgcagtatg aaatataagg
     1561 gataatcatg actcatgtct gctcggtgat cctcattcgt cgttcattcg atatttatca
     1621 tgaacagcaa aaaatatcgc tgcataacga gagtatcctg ctgctggaga aaaatttggc
     1681 agacgatttt gcgttttgtt caccggatat gcgacgactg gatatcgatg agctgacagt
     1741 ttgccattac ttacaaaata ttcgtcagct accacgcaat ttagggttac atagcaaaga
     1801 ccgtctgtta attaaccagt caccccccat gccgctggtg acggcgattt ttgatagctt
     1861 caatgaatcc ggggtaaatt caccgatact gagcaatatg ctctaccttt cctgtttatc
     1921 gatgttttct cataagaaag aactgatccc cttacttttc aatagcatca gcactgtttc
     1981 aggaaaagtt gaacgcctta ttagctttga tatcgccaaa cgttggtatc tgcgcgatat
     2041 cgcggaaaga atgtatacca gcgagagtct catcaaaaaa aagttgcagg atgaaaatac
     2101 ctgtttcagt aaaatattac tcgcttccag gatgtcgatg gccagacgat tactcgagtt
     2161 acgtcaaatt cctctgcata ctattgcgga aaaatgtggc tatagcagta cgtcgtactt
     2221 tataaacaca tttcgacaat attatggtgt aacgccacat cagtttgcgc aacattcgcc
     2281 aggtaccttt tcctgacata ttttgcattt gaatattggt caggatctca cacctgcttc
     2341 atgtgaaact cttccctgat gatttctgcc gggctaccgg ctagttctct ttcgcagttt
     2401 gccaggcggt ataggtattt tcaggaggaa aagactcggc atgtttggga ttattaagct
     2461 gacaattcat acgattacgg gaatgtgggt cagtattgtg ctgttcaaat tgatgacgaa
     2521 tggctggagt ggtttctact ttcagtgctg tgtactaagc ctggtattcc tgacggttag
     2581 ctggttgttg agtggtgaat ggttagcagg aaagagtaag gctgaacctt cacgttcaac
     2641 cttactctca tttacacgtt acgctttttt aaagcgggca aagagatgtt ccactacaac
     2701 gaaaaaaacc ggaacgaagt aaattgccag cactgttgcg gcaaacatcc cgcccatcac
     2761 gccggtacct accgcgtttt gcgcgccaga accggcacca tgactgataa ccagcggcag
     2821 cacgccgaga ataaaggcca gagaggtcat caggattggg cgtaaacgca tccgcgccgc
     2881 ttcgatgatt gcctctatcg gcgttttctc ttctttctgc atcatctcaa cggcaaattc
     2941 gacaatcagg atggcgttct tggcggaaag cccgatggtg gtcagcaaac caacctggaa
     3001 gtagacgtca ttacttaagc cgcgcagatc ggtggccagt aatgcgccaa cgacgcctaa
     3061 cggaacaacc aacatcaccg agaacggaat tgaccagctc tcatagagtg cggcgagggc
     3121 gaggaacacc acgaccagtg aaatggcata cagtgcagga gcctggtttg aggataacgc
     3181 ttcctgatac gacagtccgg tccatgagta gccgacgcct gccggaagtt tagcgaccag
     3241 gtctgccata aatttcatag cgtcaccggt acttttcccg gccgccgctt cacctaaaat
     3301 ctccattgac gggatgccgt tgtagcgttc caatcgcggt gaaccatagg tccattcggt
     3361 agacgagtag gcagaaagcg gtgccatcgt gccagaggcg ttgcgtacat accattggtt
     3421 gatgttatcc ggcaacatac ggaacggcgt gcctgcctgg acatacactt ttttcacccg
     3481 cccctggttg aggaagtcgt tcacgtagct gctgccgaag gcggtggaaa ttgtctggtt
     3541 gatatcagac agcgccacac ccattgcctc agctttcgcg gcgttgacgt tcactttgaa
     3601 catcggcgta tcttctaggc cgttcgggcg taccccggtg acctggtcag gcgattgcgc
     3661 tgccagtgat aacagctcgt ttcgtgcctg ggttagtttt tcgtgcccca ggttaccgtt
     3721 gtccagcagt tccatatcaa aacctgacgc ggtacccagt tcagccaccg cgggtaagtt
     3781 gaacgggaag acgacggctt tattgatact gcttaacgca atcattgccc gctgaatgat
     3841 cgcggtaacc gagttttcct caccgacacg ttcagaccac ggcttgagac tgataaacgc
     3901 caggccgttg ttttgcccct ggccgctgaa gccaaagccg ccaacggtaa acaccgactg
     3961 aacattatct ttctcttttg taagataata atccgtcacc tgttgcagca ctttcgtggt
     4021 gttaaccatg gtggcaccgg aaggtaactg cgcggtggtc ataaataccc cctgatcctc
     4081 ttctggtaag aaagaggtcg gtgtacgcag gaacagcacc gccatcccgg cgcaaatcag
     4141 caggtagacc accatgtagc gaccggtaca acgcaacagc gagcgggtgc tatcggtata
     4201 gtgctgagtt gatttttcaa acagcgtgtt gaagcgtgcg aacagggcgt taggtttgtg
     4261 accgccttcc ggcgcggctt tcagaatggt ggcgcacagg gcaggggtca ggctcattgc
     4321 cacaaatact gaaagcagca tggaggagat cagcgtgatg gagaactggc ggtagatctc
     4381 cccggttgca ccgctcataa aggccatcgg cataaacact gcggaaagaa caacggcaat
     4441 accgaccagc gcacgttgga tctgccccat cgatttatgc gtcgtttcct tcggtggtag
     4501 cttatcttcc gcaatgacac gctcgacgtt ctccaccacc acgatggcgt catccaccag
     4561 taaccctatc gccagcacca tcccgaacat agttaacgtg ttgatggtga aaccgaccgc
     4621 cgacaagatc gcaaacgtcc cgagaataac caccggtacg gcaatcgtcg ggatgattgt
     4681 ggcacggaaa ttctgcaaaa acagatacat gaccaggaag acgaggatga tagcctcaac
     4741 cagtgtttta aaaacttcct gaatagaaat ttcgataaac ggcgtggtgt cgtaaggata
     4801 aaccgtcttc agacttgcgg ggaaataggc tgataagcgg ttcagctcct ctttgactgc
     4861 ccgcgaggta tccagggcgt ttgctccggt agccagtttg atggcgatcc cggcagcagg
     4921 tttgccgtta tagcgcgcca cggtggaata atcttccgct ccaagttcga cgcgggcgac
     4981 atcacgcagc agcacttgcg aaccatcttg ctgaactttc aacaggattt tgccaaattc
     5041 ttccggcgtt tgcagacgcg tctgcacaat gatcgaggcg tttagttgct ggtctgccgc
     5101 ctgtggcatg ccacccagtt gaccaccgga aatctggttg ttttgcacct taatctggga
     5161 aataacatcg gaaggtacca gattgtattt attgagtttt tgcgggtcca gccagatacg
     5221 catggcgtac tcggaaccaa agagctgtac gctaccaacg cccgcggtac ggcttagcgg
     5281 gtctttgata ttagacgcta catagtccgc gatatcgtac tggttgaggc tgccgttatc
     5341 agaaataaac gccgctacca tcagaatatt actgctcgac ttatcaacgc taatcccctg
     5401 ctgctgcacc gcttcaggta atgaaggcat agcgagttgc agtttatttt gcacctgaac
     5461 ctgtgcgata tcaggagatg tcccagtctc gaaggtcaga gtgatagagg cattacccgc
     5521 cgcatcactg gttgaagaca tgtacatcag gccatcaagc ccattcatat tttgctcaat
     5581 cacctgagtg accgagtctt ctaccgtttg cgcatcggca cctggatagg tagcgctgac
     5641 ggtaatggtc ggtggcgcaa tctgcggata ctgcgcaacc ggtaagttca tgatcgccag
     5701 accacctgca agcatcataa taatggcaag tacccaggca aaaaccgggc gatcaataaa
     5761 atagttagcc atgaaagtcc ccttaagcct gcaacgttat tgtttcgatt cggtgctggc
     5821 gttttcctgg ctggaggaaa ttgctcgtgc tttgataccc ggacgaatgc gttgcaaacc
     5881 ggaaacgatc acccgatcgc cagcctgcaa gccagaggtg acaacccact ggtcgccgat
     5941 ggctttgctg gcttcaattt cgcgtagctg cacaacatcg tctttatcca gaatgagcgc
     6001 cgttgcttta ccctgggcgt tgtgggtgac gccttcctgc ggcaccagta atacattctg
     6061 gcggctacct tcatccacta atgccgtgac gtacatgcca ggcagcaagt caccatttgg
     6121 gttggggaaa atcgcccgta acgtcacgga gcccgtggtt tcatccaccg tcgggtcgga
     6181 gaatttcagc gtgccggtct ggctgtagcg tttaccattt tccagattga gctgtactgg
     6241 cgtactgccc tgaacctgtt tgatttgccc actggcgacc tcttctttca tgcgcaagaa
     6301 atcctgcacc gactgcgtga gatcgacata aatcgggtcc agacgttgta cggtaaccag
     6361 cgaatctgcc tgattagcgg taacgagtgc gccgacggtc accgacgatt tcccgctgac
     6421 gcccgtaatc ggcgaggtga cattcgcgta ttgcagattg atcgtcgcct gttcaacagc
     6481 cgctttggcg acggtgacat tggcttctgc ttcattcagc tgggtgcgcg cggtgtcgta
     6541 atcctgacgg ctaacgtagt tggtcttcag caacgatgcc tggcggttaa aggtgatgcg
     6601 ggcattgctg gcggtagaga gcgctttcgc cagtgagcct ttggcggagt ttagctcggc
     6661 ctgtaaaggt gcaggatcaa tctgatacag cgaatcgccc tggttcactt tatcgccttc
     6721 gataaagttg cgtttaatga taataccgcc cacctgggga cgtatctcgg caacttcata
     6781 aggaacggtt ctaccgggca attcgctcaa cacattgacc gaaccggggg agagtgtgac
     6841 gacaccgacc tcaggcgtca tggcggcggc gttttccgcc gatttgtcat cgcaggcggt
     6901 gagcatcgcg ccgcagaata acaacggtat taacagtttt cttcttctgt tcattttagt
     6961 ccctgaaaat tcttgagaaa taacggttct ttaaattgcg cgcgaggaga gatatgaggg
     7021 atttacagac cagcggcata gtggggttgt cagccagtaa ggtgggatac aggcacagtg
     7081 atcgacattg tgaggtcaac gacaaaaaaa atgttgccgt tctgccaaca gttcctgcca
     7141 gcattcgggc aacgaagggt tctactggtg gatacacata ccaggggaat aaagtcgttt
     7201 tagcctctcc tttagtaatc accgggggta atgaaatcag catctgcatc cctcgtcatg
     7261 ccagccatca atttcagttg cttatgtcct gactaaaaat aagatgtgat acctagggtg
     7321 acgatgtcgc tcatacgtct tagtttcagc ttgtacataa tgttgaattt ctgaatcttt
     7381 aatgtttgtt gcgaaatatt gagcgtcgac gtgatattgc tttcattttt atttttcaga
     7441 atcagttgca taattttgaa ctgattatgt gaaaaacata attgtgaatt cttatggggc
     7501 aagtgtttac cataagtaat ctcaagaaga tttttgatac tttctttgcg gctaacaaaa
     7561 taaataggcg ctttagcttt tagtttactg atgtgataag gtgccaaaac aataattctc
     7621 tcggcatcta atttctccag aaatttaatc gcttcttcat caaggatatg attgtgatag
     7681 gtatcaatga taaccttgaa gggtttattg cctacttttt tgatctctga cagggaattg
     7741 atttttatca tttcgtgatt atctttcaac tgccaaaagc cctgtaaaag aaaagaatct
     7801 ttcgtcatga gaaaaatcat aacttgctcc ttagccgtta tcgtttcgaa catgtcatcc
     7861 ttttcattat ttacatcctt gtccgaatcg ttgttcaata tagtaaacgc ctataagaac
     7921 tttgcccttc gtgaactaat acgtctatta acactaatca atacttcaga tttatccatc
     7981 acgcactcca tatattgatc ctaagtaaga ttcctggttg ttatcagctt gtaaatagta
     8041 aacaaaaagt taacgtttgc ggattactgc ccaagaataa gttatcaata accagtttgt
     8101 gatctctgaa gaatattact aaagttaaaa tgtaatccga tttaaatatc gagtctcctt
     8161 gtttcgactt aagctggcaa ttggattgcc agctttcttt taacgcattg aaattacctg
     8221 agtaaataac gcattcatgt cttcaggttt ttatatagcg tctggagaca cggatattta
     8281 tgcaatgtaa tcaacgccag ttgcaaaaaa atgaacccgg attacttatt taaccgccca
     8341 tagcatcaac gcttacggaa ctctttgttc actttcccac agcactttta aaacattaaa
     8401 cctgactacg gaaaatatca gccatgataa tgtttgaaat ggctaatttg ccatggagtg
     8461 aaaaaaatta gatgaaattc agtaggttga aata
//
LOCUS       DAJVTL010000163         8486 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.165, whole genome shotgun sequence.
ACCESSION   DAJVTL010000163 DAJVTL010000000
VERSION     DAJVTL010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8486
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.165"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..888
                     /gene="celF"
                     /locus_tag="OQQ26_003795"
                     /gene_synonym="chbF"
     CDS             <1..888
                     /gene="celF"
                     /locus_tag="OQQ26_003795"
                     /gene_synonym="chbF"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HCS1859098.1"
                     /translation="TEAVYRHTGFKRFIGVCNIPIGMKMFIRDVLMLKDSDDLSIDLF
                     GLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASGVKNIFDLPFSEGLIRSLNLLPCS
                     YLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGA
                     YYSDAACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCKLGRDGATPHPRIT
                     HFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSSLVHSDRDAELLAREMILA
                     HEKWLPNFADCIAELKKAH"
     gene            901..1659
                     /gene="chbG"
                     /locus_tag="OQQ26_003796"
     CDS             901..1659
                     /gene="chbG"
                     /locus_tag="OQQ26_003796"
                     /EC_number="3.5.1.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitin disaccharide deacetylase"
                     /protein_id="HCS1859099.1"
                     /translation="MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAID
                     HAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQ
                     ELASQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVASFAAEEGIALRIDRQPLSNAG
                     DLPANLRSSHGFSSAFYGEEISEALFLQVLDDSSHRGERSLEVMCHPAFVDNLIRQSA
                     YCFPRLTELEVLTSASLKYAIAERGYRLGSYLDV"
     gene            complement(1706..3967)
                     /gene="katE"
                     /locus_tag="OQQ26_003797"
                     /pseudo
     CDS             complement(1706..3967)
                     /gene="katE"
                     /locus_tag="OQQ26_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025308.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catalase HPII"
     gene            4150..4413
                     /gene="cedA"
                     /locus_tag="OQQ26_003798"
     CDS             4150..4413
                     /gene="cedA"
                     /locus_tag="OQQ26_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division activator CedA"
                     /protein_id="HCS1859100.1"
                     /translation="MRLVKPVMKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVW
                     MLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE"
     gene            4690..5504
                     /locus_tag="OQQ26_003799"
                     /pseudo
     CDS             4690..5504
                     /locus_tag="OQQ26_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019843061.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5508..6899)
                     /gene="tcyP"
                     /locus_tag="OQQ26_003800"
     CDS             complement(5508..6899)
                     /gene="tcyP"
                     /locus_tag="OQQ26_003800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine/sulfocysteine:cation symporter"
                     /protein_id="HCS1859101.1"
                     /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGLVFG
                     LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
                     LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGKRVLAA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA
                     VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG
                     ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA
                     ILDSEDDAELAHH"
     gene            complement(7032..7622)
                     /locus_tag="OQQ26_003801"
     CDS             complement(7032..7622)
                     /locus_tag="OQQ26_003801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707386.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1859102.1"
                     /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
                     PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA
                     LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
                     WMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY"
     gene            complement(7785..8453)
                     /gene="hxpB"
                     /locus_tag="OQQ26_003802"
     CDS             complement(7785..8453)
                     /gene="hxpB"
                     /locus_tag="OQQ26_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HCS1859103.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVNISRRN
                     ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
                     LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
                     DLLG"
BASE COUNT         2206 a         1966 c         2137 g         2177 t
ORIGIN      
        1 actgaagccg tttatcgtca taccggattt aaacgcttta tcggcgtgtg taatattcca
       61 attggtatga agatgtttat tcgcgatgtt ctgatgctga aagacagcga tgatttatct
      121 atcgatctgt tcggcctcaa ccatatggtg ttcattaagg atgtgctggt aaatggcaag
      181 tcgcgctttg ccgaattgct tgatggtgtg gcatccgggc agttaaaagc atctggcgtt
      241 aaaaatattt tcgatctgcc atttagcgaa ggcttaattc gttctctgaa tctgttgccg
      301 tgttcttatt tgctttatta cttcaagcaa aaagagatgc tggctattga aatgggcgaa
      361 tactacaaag gcggcgcacg agcgcaggta gtacagaaag tcgagaaaca actttttgag
      421 ctgtataaaa acccggagtt gaaagttaag ccgaaagaac tggaacagcg cggtggggct
      481 tattactctg atgcagcgtg cgaagtgatc aacgctatct acaacgacaa gcaagcagaa
      541 cattacgtta atatcccgca tcatgggcat attgataata ttccggcaga ctgggcggta
      601 gaaatgacct gtaagctggg gcgcgatggc gcgacgccac atccgcgcat tacgcatttc
      661 gatgataaag taatggggct gattcacacc attaaaggct tcgagattgc tgccagtaac
      721 gccgcactta gcggagaatt taacgatgtg ttactggcgc taaaccttag ttcgttggtg
      781 cattccgatc gcgatgctga gctgctggca cgcgagatga ttctggcgca cgagaaatgg
      841 ctgccaaact ttgccgactg catcgcagag cttaaaaaag cacattaacc gaggctgatt
      901 atggaacgct tactgattgt taatgccgat gattttggct taagcaaagg tcagaactac
      961 ggcattatcg aggcctgtcg caatgggatt gtcacatcga cgacggcgct ggtgaatggg
     1021 caggctattg accatgcggt gcagttgagt cgtgatgaac cgagtctggc catagggatg
     1081 cactttgtcc ttactatggg caagccactg acagctatgc cggggttaac ccgcgatggt
     1141 gtgctgggaa aatggatctg gcagttggca gaagaagatg ctttaccgct ggaagaaatt
     1201 actcaggagc ttgccagtca gtatttgcgt ttcattgagc tatttggacg caaacctacg
     1261 catcttgata gccatcatca tgtgcatatg ttcccgcaga ttttcccgat tgttgccagc
     1321 tttgcggctg aagaggggat tgcgttgcgc atcgaccgtc agccgctatc taacgctggt
     1381 gatttaccgg ctaatctgcg cagttcacac ggattcagta gcgcgtttta tggtgaagag
     1441 attagcgagg cactgttcct gcaagtgctt gatgattcca gccatcgcgg ggaacgctcg
     1501 ctggaagtca tgtgccatcc ggcatttgtc gataatttga ttcgccagag tgcttactgt
     1561 ttcccacggt taacggagct ggaagtgctg acatcagcgt cgttgaaata tgcaattgct
     1621 gagcgtggtt atcggttggg tagttatctt gatgtgtaag taaggtggta aggtcactcc
     1681 ccaggggacg tgaccttatc catatttacg ccggaatttt gtcaatctta ggaatgcgtg
     1741 accacacgcg gtgtgctgcc atcagcgtta acagttcatc cataaaacta ccgtcggcgc
     1801 tgtcagcttc cacaatccct tcttcaccct ggtcagcgac cttgattgtt gctttaaact
     1861 tgcgcgcgtc tcccgccagc gcaatcggtt taaggtgttt gtaggcttcc atcaggtagt
     1921 agttggcatc gccgttgtca gcgatatccg cgatattgcc gcaagggaca atgaccgcat
     1981 cgaccgtcag cgaaggcgca ccggcaaagg tagcggctat aggcaacacc gtaccgtcat
     2041 ccgcagtcac ttcacccatt cgggagtaga gcagtttggc atgaacgcct ttggccttca
     2101 gggccttgag aatggccaga aggtctgccg atctcacttc atcattaagt aaaatcgcta
     2161 ccacgcgacc tttcacatca ccgtcaggaa tggcgtacaa acttaaggat ggatcctttt
     2221 tcagaccgtt gacgtccgga ggcggggtga tattcagctg gtcgtccgtc agctcgatac
     2281 cgagattttt cgccaccgct tgggccagag tgagatcaat atgcgccagc tggtcaacaa
     2341 cgcgctcacg aatatacgga cgaacgactt tgcttaactc aaaactgaaa ccatcgacaa
     2401 tatggcgctg ctcgaatggc gtctgactta gccagaacag acgcggatgg gaataatatt
     2461 cgccaaacga tgggctgcgc tcgcgaactt tattgccttc cacgcgctcc tagtatgatt
     2521 caaaaccgcc gcgtttcggc cccggtggtg tttcgcgcgg ccagttatcg ttgatcgagt
     2581 tcggttcata attcgccggg ttagtgtcga tccccatacg atgcatgccg tcacgctgga
     2641 aattatggta agggcaggtc gggcggttaa tcggaatctc atggaaattc ggcccaccaa
     2701 gacgactgat ttgtgtattg gtataggaga acaaacgtcc ctgcaacagg ggatcgttgg
     2761 tgaagtccag accaggaaca atatgacctg gatggaatgc tgcttgttcg ttttcggcaa
     2821 agaagttatc cggattgcga ttgagcacca ttttgccgac acgctgaacg ggcaccagtt
     2881 cttccgggat cagtttggtt ggatcgagaa gatcgaagtc gaacttgaat tcatcttctt
     2941 caggaatcaa ctggaagccc agttcgtatt ccggaaaatc gcctgcttca atggcttccc
     3001 acaactcgcg gcggtggaag tccgggtcac gtccggttag tttttgtgct tcatcccaaa
     3061 cgagtgaggc tttacctgcc agtggtttcc agtggaaacg tacgaacgtt gccttccctt
     3121 cggcattaat caggcggaag gtgtgaatac cgaagccttc catggtgcgg taactgcgcg
     3181 ggatgccgtg atccgacatc gcccacatca cgttgtgcag agtttcaggt tgcagagaaa
     3241 cataatccca gaaagtatcg tgggcgcttt gcccttgtgg aattgcccag tgcggttctg
     3301 gttttaccgc atgaacaaaa tcggggaatt tatgcgcatc ttggataaag aagattggcg
     3361 tgttattgcc aacgaggtca aaaataccct cttcggtata gaacttggtg gcaaagccac
     3421 ggatatcacg cacggtatcg gcagagccag cgccaccctg aacggtagag aaacgtacaa
     3481 atactggggt gattttgttc ggatctgaga ggaaatccgc tttggtgata tcgcttaagc
     3541 ttttatatgg ctggaaataa ccgtgagcgg ctgatccgcg tgcatgaaca atacgttccg
     3601 ggatgcgctc atggtcaaag tgggtgattt tctcgcgcag aataaaatct tccagcagcg
     3661 ttgggccacg gttaccggca cgcagtgagt tttgatcgtc ggcgatgcgc acgccctgat
     3721 tagtggtcag cgcataattt tcactgcctt tgcgtacgtt ttccagagaa ttaagttttt
     3781 cgttacgcgt atcaggggct ttcaggctcc ctggggcggt aggttgtgca ccaggcggtg
     3841 ttggttcagc cgctggacga tgagatccgt cctcaggtgc cagtgagtcc atccccggtt
     3901 tcgcttcgca ggaatcgtgt agtggtgact ggtgctgatg tgggttcttt tcgttatgtt
     3961 gcgacattga actcgtctcc ttaatttatt actgaaaggg ccgctgtttt ggtcaaaaaa
     4021 ctctctaact atagaccacc agcctgatcc cgcttcggag actattctgg aaacggtgtt
     4081 atgaaataca cgcaaagtgg gacgtacagg ggctaaatcg gctaaactgc agtttttctg
     4141 atttttaata tgcgtttagt gaagccagta atgaagaaac cgctccgcca gcaaaaccgc
     4201 cagattatta gctatgtccc acgcacggaa cccgcgccgc cagaacatgc gattaagatg
     4261 gattcgtttc gtgatgtctg gatgctgcgt ggcaaatatg ttgcgtttgt actgatggga
     4321 gagtcatttc tgcgctcacc ggcgtttact gtgcctgaat ccgcccagcg ttgggcaaat
     4381 cagatccgcc aggaagggga agtgactgag taaagattac gtacctcccg gttttgccgg
     4441 gagttacatg gcctgaaatt ctgtatttca ttgctacatt cattcaaacc acctgtaaca
     4501 aaaagctgcc tttgacgatc tattgctata aataagtgat cttttttctt taattgttta
     4561 tttattttaa aatggttaag ttttgctaat catgatgagc tatttttgat agttcatcct
     4621 gtggcgtcgc gcttaaactt atattgtaaa tgacttagat ttaaatgaga taatgatttt
     4681 gttaacaata tgaggtggga gatgttttct acaaacttaa tacagagtaa tcatggtgat
     4741 ttaaatatta aaagtctggc ttttgactct tttaaagaaa ggcttgagtc taccatggcg
     4801 gcactcactt tctttatatc aacgggtcaa tgtgactgcg atgaaatagc aggatcaaat
     4861 tttaattata tgattgccta tatgtctaac attaactatg atgcctcaaa gccaggagcg
     4921 ccagcactta gttttgatac atatctgcag ggcaatgtta aatataaagt aataattaat
     4981 aatctttatg gtagtgaaat tcggataaga ggtataaata aagattttat tggaatggat
     5041 gtcacttctg tgtttcgccc agaaaaaatg acgaatttga tcaatataaa aacaggttgg
     5101 ttattcatta tttaaggact atatactatg aacaaaatta tatacatcct gtcgggagca
     5161 tttttgctgc gattcaaaaa aatgagagtc tcctaaagtt tccttcgata atatcaatgc
     5221 ttaatatcaa tcttcttttt aatccactaa atcttccggg aatgggaagt ggtatacttg
     5281 aagatattat gagtattcca gatagttcac ttagaaaacg tctcgggtat gaggttttaa
     5341 gcttctcgct acaggcacat tcattgagcc aggaatgtat tgataagttg gacatttttt
     5401 tcgctgacga tctgtttaaa tatgagtcag tatgcatcgc cgcgatggaa catttaaaaa
     5461 gtaaggcaac ggcccctata caaaacggac cgttgccagc ataagaatta atggtgtgcc
     5521 agttcggcgt cgtcttcgct atccagaatg gctttatcgg tttgcttcag ccactggctg
     5581 gtcagcgtgc cagctgtcat cgagccacta acgtttagcg ccgtacggcc catgtcgata
     5641 agcggttcaa cggagattaa cagcgccacc agggttactg gcaggcccat cgcaggcagc
     5701 acaatcagtg cggcgaaagt tgcaccacca ccgacaccgg caacgcctgc ggagctaacg
     5761 gtaacaatac cgaccagcgt cgcaatccac atcgggtcca gcgggttaat gccaaccgta
     5821 ggcgcaacca tcaccgccag cattgccgga tacaaaccag cgcagccgtt ctgaccaatg
     5881 gtcgcaccga aagaggcggc gaaactggcg atggattcag gaacgcccag acgacgcgtt
     5941 tgtgcttcca cattcagtgg gatagatgca gcactggaac ggctggtaaa ggcaaacgtc
     6001 agcacaggcc ataccttacg gaagtacttc agcggactca cgccattaat gcccagcaga
     6061 atgccatgca ctgcaaacat aatcagcaga ccgaggtagg acgcgacaac gaaacttccc
     6121 agtttgatga tgtcttgcag gttagaacct gcaaccactt tggtcattag tgccagaacg
     6181 ccgtaagggg tcaactgcat gaccaagcga actagtttca tgacccagct ttgcagggta
     6241 tcgatagcgg ctaagacgcg tttacctttc ggcgcatcat ccttcagcag tttcagcgca
     6301 gctacaccga ggaatgcggc aaaaattacc acgctgataa ttgacgtcgg attggctccg
     6361 gtcagatcgg caaacgggtt tttcgggata aaggacaaga ccagctgcgg aacgctcagg
     6421 tcagagactt taccaacata gttactttca atggcgttca gacgtgcagt ttctgcacca
     6481 ccctgaacca gaccttcagc cgtcaaacca aacaggttgg tgaccagcac accgaccagc
     6541 gccgcaatca gcgtggtaaa caaaagcgta ccgatggtca gaaaactgat tttgcctaac
     6601 tgagatgcgt tatgcagacg ggcaaccgcg ctcagaatag aggcgaagac taacggcata
     6661 acgatcattt gcagcagttg aacatagccg ttaccaacga tgttaaacca ctgtacagaa
     6721 tctttaagta cctggctgtc agaaccataa atggtatgca gggcaaggcc aaaaaccaga
     6781 cccatcacca gacccaccag cacttttttc gccagactcc actgtttatg gcgggtctga
     6841 gccagcgcaa acagcagtac aacgaacacc acgatgttcg caattaatgg aaagttcatc
     6901 cccgttctcc tgaacttatt atttctatca ctgcgtagca gtcatagtgt tggcgcaaga
     6961 ttaacagaac tgtgagttgg ctcttatatt caaatggaat tgcttattac agaaaggcga
     7021 tttttgcctt tttagtattc aacctgatgc ttaataagcc gatgaaactg gatctgcaag
     7081 gtattgatca tttgcgatga ccaacgaaca gcgctgtttt cgggtaatga atggggcatc
     7141 cataccgacc agacaaataa tgccatgcag ataaaacgtt ccagttggtt gcccttttgg
     7201 ggtaccagga taggcaagcg gaaccgccag cggcatggcc agagcagggg aacaccggcg
     7261 ggtgtcagca tatcggcaag tatgtggctc aaataaccca gcaccattcc ttgtagcgca
     7321 tcagccggaa tgaaccagcc ttccggaacc ttaaggtaaa aggttgccag cagcgcaaat
     7381 accgccagca gactgtgggt aaaaccacga tgcccaaaag cgcgggcgat cggttttgat
     7441 atccatttta atcgctgccc aagaaacgac tttgggtgat cgatgtccgg taacaaacac
     7501 gtcaggattg cggaagggac aatatgccac cagtcaccct gtgccagcac gggcgtcagc
     7561 tcggcatttt tggcaaatac cgcacaagca atagaaaaga gaaggtgacc ttccgccgtc
     7621 atgataaaac tcactaaact gtcgatacgt acagtatagg atttttatac agtgcacgga
     7681 agtggtgacg gtgtaactct ttctcttaaa ttgacgatta atccgtcagt tgaatgcaaa
     7741 ttcagataaa gaaccagggg cagcgtgatc actgcccctg gtcattaacc gagaaggtct
     7801 tttgcggtga gttctgtcag cgatgagagt ttgacgtttg ctaatacaaa acgtggatca
     7861 ttttgcgctt ctggcgcagg aacgacgatg gaacgcatgc gggctgcttt agaagcgatc
     7921 atgccattta ccgagtcttc cagcgccacg caggtcagtg ggtcaacgcc cagttttgct
     7981 gcgcagtcga gatatacttg cggatgcggc ttgctgtaag gcagtttttc agccgaggcg
     8041 agggcatcga aactgtcgcg taagtcaaac atggtcaaca ctttttccag catatgtagt
     8101 ggtgacgcgg aggccagtcc caccaataaa ccttgttctt tgcataacgc aacagcttcg
     8161 cgcacgcctg gtaataatgg acgtgtctct tcaaccagtg aaatggcacg ggcaataacc
     8221 cgttctacta cttcctgacg gcttggccca ttccacggtt gccgggcgta ccaaagatcg
     8281 accaccatat cgatgcgtaa acctaaggtg tccggcagct cgttacgacg ggagatattc
     8341 acccccaggc ttgccatcac atccagttcg gctcgatccc ataaaggttc tgagtcgata
     8401 agtaatccat ccatatcaaa aattgcagca agaatctgac gcggggttga cattacaacc
     8461 tctcctttag agcattatgt gtaagg
//
LOCUS       DAJVTL010000164         8459 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.166, whole genome shotgun sequence.
ACCESSION   DAJVTL010000164 DAJVTL010000000
VERSION     DAJVTL010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8459
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.166"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..251)
                     /locus_tag="OQQ26_003803"
     CDS             complement(<1..251)
                     /locus_tag="OQQ26_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859104.1"
                     /translation="MHSWKKKLVVSQLALACTLAITSQANAANYDTWGYHDNTTTDLV
                     WPYDTDNDGIADAGGMDPMGSDGNYVTYNGFVYYNNANG"
     gene            774..1748
                     /gene="hemB"
                     /locus_tag="OQQ26_003804"
     CDS             774..1748
                     /gene="hemB"
                     /locus_tag="OQQ26_003804"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HCS1859105.1"
                     /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY
                     KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD
                     FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY
                     AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR"
     gene            complement(1805..2698)
                     /gene="tauD"
                     /locus_tag="OQQ26_003805"
     CDS             complement(1805..2698)
                     /gene="tauD"
                     /locus_tag="OQQ26_003805"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HCS1859106.1"
                     /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
                     VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
                     TFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFP
                     EYKYRKSEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES
                     EALLSFLFAHITKPEFQVRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRRRFLGINR
                     FIGRGNTRVDGPLAPLGRGLG"
     gene            complement(2695..3522)
                     /gene="tauC"
                     /locus_tag="OQQ26_003806"
     CDS             complement(2695..3522)
                     /gene="tauC"
                     /locus_tag="OQQ26_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter permease TauC"
                     /protein_id="HCS1859107.1"
                     /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
                     QLISPMFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
                     IAMGLSPTVRGILDPVIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
                     ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
                     LIAATRGLGFMVQSAGEFLAADVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ"
     gene            complement(3519..4286)
                     /gene="tauB"
                     /locus_tag="OQQ26_003807"
     CDS             complement(3519..4286)
                     /gene="tauB"
                     /locus_tag="OQQ26_003807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter ATP-binding subunit"
                     /protein_id="HCS1859108.1"
                     /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
                     NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWCNVQDNVAFGLQLAGIEK
                     MQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD
                     AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGLGRVLERLPLNFA
                     RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS"
     gene            complement(4299..5261)
                     /gene="tauA"
                     /locus_tag="OQQ26_003808"
     CDS             complement(4299..5261)
                     /gene="tauA"
                     /locus_tag="OQQ26_003808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1859109.1"
                     /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNT
                     FAKESGASVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKL
                     GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPA
                     IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHP
                     EVVKAFAKSAIDAQQPYIANPDAWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ
                     QQTAELTGPVNKAIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ"
     gene            5870..6574
                     /locus_tag="OQQ26_003809"
     CDS             5870..6574
                     /locus_tag="OQQ26_003809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016241930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HCS1859110.1"
                     /translation="MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGAHPDDIELGC
                     GASLARLAQKGIYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQTIHLNFADTRA
                     HLQLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQIL
                     GYETPSTWLSFMPQVFESVKEEYFTVKLAALKKHKSQERRDYMRHDRLRAVAQFRGQQ
                     VNSDLGEGFVIHKMIL"
     gene            6584..7780
                     /locus_tag="OQQ26_003810"
     CDS             6584..7780
                     /locus_tag="OQQ26_003810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HCS1859111.1"
                     /translation="MKTWIFICMSIAMLLWFLSTLRRKPSQNKGCIDAIIPAYNEGPC
                     LAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALM
                     NGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHI
                     RATVKLLMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTL
                     VANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIF
                     PMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLL
                     VPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRCSALVEASTAYSQPSVTGT
                     EKLSEA"
     gene            7758..8339
                     /locus_tag="OQQ26_003811"
     CDS             7758..8339
                     /locus_tag="OQQ26_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012602184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HCS1859112.1"
                     /translation="MKNYLKLNVKEKNIQIADQVIIDETAGEVVIGANTRICHGAVIQ
                     GPVVIGANCLIGNYAFIRPGTIISNGVKIGFATEIKNAVIEAEATIGPQCFIADSVVA
                     NQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYIGQRSRLGVQVIILPGRI
                     ISPNTQLGPRVIVERNLPTGTYSLRQELIRTGD"
BASE COUNT         2121 a         2184 c         2016 g         2138 t
ORIGIN      
        1 tcgccattgg cattgttata gtaaacaaaa ccattgtaag ttacgtagtt accatctgac
       61 cccatcgggt ccatgccgcc agcatcggca attccatcat tgtcggtgtc atacggccaa
      121 actaaatcgg tcgtggtgtt gtcatgatac ccccaggtat catagtttgc tgcattagcc
      181 tgagaggtga tagccagagt gcaagccaat gctaattgtg atactacaag tttctttttc
      241 caggagtgca tttgtcatcc ctcctcaggg acgtaataag ttgatccatc aattatcaat
      301 gcatagaaaa catattatgt ttcgcgctaa tgattatgct gcattacaga cgaatggttc
      361 aattattctt tcccctaagt ccgaatgtgg acatatataa tttatggaga aaacacgcat
      421 caaattgata aaaggacgat atttcaacat gttgcagata atgttatttt tgatgcatac
      481 gcgttataaa tatcaaaaac acaaaccaga taaatatctt atcaatatac aacaaagttt
      541 gaattattca atttatagca gcacaaccaa acgcccaaaa ataataacca agagctataa
      601 ataaagatta aaaatatttt cagtgaatat gaaattattg ctatttctat tacaaagatg
      661 tcctggtctc tctttcattc tcttcttgtc aacatcacga caactttcgt aaaacactcc
      721 tgccccgctt caggtatact gtgcacctta attccacaaa catcaggcag accatgacag
      781 acttaatcca acgccctcgt cgcctgcgca aatctcctgc gctgcgcgct atgtttgaag
      841 agacaacact tagccttaac gacctggtgt tgccgatctt tgttgaagaa gaaattgacg
      901 actacaaagc cgttgaagcc atgccaggcg tgatgcgcat tcctgagaaa catctggcac
      961 gcgaaattga acgcatcgcc aacgccggta ttcgttccgt gatgactttc ggcatctctc
     1021 accataccga tgaaaccggc agcgacgcct ggcgggaaga tggactggtg gcgcgtatgt
     1081 cgcgcatctg caagcagacc gtgccagaaa tgatcgtcat gtcagacact tgtttctgtg
     1141 aatacacttc tcacggtcac tgcggtgtgc tgtgcgagca tggcgtcgac aacgacgcga
     1201 ctctggaaaa tttaggcaag caagccgtag ttgcagctgc tgcaggtgca gacttcatcg
     1261 ccccttccgc cgcgatggac ggccaggtac aggcgattcg tcaggcgctg gacgctgcag
     1321 gctttaaaga tacggcgatt atgtcgtatt cgaccaagtt cgcctcttcc ttttatggcc
     1381 cgttccgtga agctgccgga agcgcattaa aaggcgaccg caaaagctat cagatgaacc
     1441 caatgaaccg tcgcgaggcg attcgtgagt cactgctgga tgaagcccag ggcgcagact
     1501 gcctgatggt taaacctgct ggagcgtacc tcgacatcgt gcgtgagctg cgtgaacgta
     1561 ctgaattgcc gattggcgcg tatcaggtga gcggtgagta cgcgatgatt aagttcgccg
     1621 cgctggcggg tgctatagat gaagagaaag tcgtgctcga aagcttaggt tcgattaagc
     1681 gtgcgggtgc ggatctgatt ttcagctact ttgcgctgga tttggctgag aagaagattc
     1741 tgcgttaatt tttttcctct cagaaagggg gagttaacct gttgaaagta cggtgaacgc
     1801 cccctcaccc taaccctctc cccaaggggg cgaggggacc gtccactctc gtattacccc
     1861 gcccgataaa acggtttatc cccaagaatc gtcgccgatg cataatccgc cgctgtggca
     1921 ggtaatcggc attggcatag tgctgggtca cgcggttatc ccaaatcgca atatcatttg
     1981 gttgccagcg cacctgaaac tccggtttgg tgatatgggc aaacaaaaaa cttaacaagg
     2041 cttcgctctc tttctcgctc acatcaacaa ttcgcgtagt aaagccttca ttcacaaaca
     2101 gcgcctgttt accgctcacc ggatgcgttc gcaccaccgg atgtagcaac ggaggatttt
     2161 tcgcgaccgc ctcgcgccag cgttgatgtt cctcctcgct tttgcggtat ttgtattccg
     2221 ggaacgattt acggaaatca tgctccgcac gcagcccgct cagcagctgg cggaagggaa
     2281 cagagagcgc ctcataggcc gcaataccgc tggtccagag cgtatcaccg ccggtcgaag
     2341 gtaactcttt agctgccaga atcgcccctg cgggtggcgt ttcaataaat gtcacatcgg
     2401 tatgccagtt gtcgttatct ggcggattat cgttatgggt atccagcacg atgatctcgt
     2461 caaccccttc ggcatgaggg taaacagggt gaatatgcag ttcgccaaaa cgctgggcca
     2521 gcgcgcgttg ctgctgcggc gtaatggctt gatcgcgcag aaacaccacc tgatggcgca
     2581 gcaccgcatg gtaaagctgt tcaaactgat tatcgcttaa cgggcgcgtc aggtcggcac
     2641 ccgaaatttg tgcgccgata tacggcccca gcggggtaat gctcagacgt tcactcattg
     2701 tacttctcca tgccagggcg tcagacggcg ctgtaacgcg cgcaaaccca gttctaaaag
     2761 aaaggcgata atcgcaatca ccgcgatccc cgccagcacc acgtcagccg cgagaaattc
     2821 acccgctgac tgaaccataa atcctaaacc gcgcgtcgcg gcaatcagct ccgccgctac
     2881 cagcgtagac cagcccacac ccagaccaat gcgtaatccg gtgaggattt ccggcagcgc
     2941 gccgggcaaa atgacaaacc acagcacctg cgcacggctg gcacccagcg actgggcggc
     3001 acgaatgcga acctgctgcg cgcttttcac ccccgccagc gccgacatcg ccaccggtgc
     3061 aaaaatcgct aaatagatca gtaagatctt cgaggtttca ccaataccaa accaaatcac
     3121 catcagcggc aaataagcca gcggcggcac cggacgataa agttcgatta ccggatccag
     3181 aatgccgcgc accgtcgggc ttagccccat ggcgatcccg accggaatac cgatcaccac
     3241 cgccgcgagt agcgccagca caatgcgcgt caggctggct gccagatgct gccacagcgt
     3301 ggcgtccata aatccctgcg gtccggcaat ggtgagcagt tttgccagta cttgttgcgg
     3361 cggcggcaaa aacatcgggc taatcagttg cagcgccgcc accgtccacc atacagtgag
     3421 taaaaccgct aacgtgccaa tgcttaaggt cacctgacgc gagagcggcc agcgccattt
     3481 cagccgccgc gaatgcagtt tttcattaat gagcacactc atgagaacgc ctcccgttgc
     3541 tcaaatacgc ggcttaaaac atattcgcgc atggcgatga attgtggatc ggacttgatg
     3601 ctgcggctcg actctcccgc aacaaagcgg cgagcaaagt tgagcggcag ccgctccagc
     3661 acacggccaa ggccggatga aagcagaacc agttcagtcg ccataaacac cgcttcttct
     3721 atatcgtggg taatcaacag cacctgcttg cccgtctcct gccagagttt cagcagcaga
     3781 gtttgcatct ggtcgcgggt gaaggcgtcc agcgcaccaa acggttcgtc gagtaataac
     3841 agctggggat tcgccgccag cgcgcgggca atccccaccc gctgacgttg accaccggaa
     3901 agctgccaga tatagcgttt ttctgcgcct tccagcccca cttttttcag catctggtgc
     3961 gcgatttcca gtcgctgcat tttctctata cctgccaatt gcaggccgaa cgccacgttg
     4021 tcctgtacat tgcaccacgg tagtagccct tcattctgaa aaactacgcc acgctctgct
     4081 cccggtccct caatacgctt acccgccagt tgaatgctgc catgctgata aggcacaaaa
     4141 ccggcaatca gattcagcag ggtggtttta ccgcagccgg acggccccag caccaccagt
     4201 agctcgccgc tttccagcgt caggttgata tcttccagtg ccggtttgcc gccataatcg
     4261 gcatagagat gagagatttg cagcatctgc gcctcctttt attgcacgaa gcgcgaggta
     4321 acgtactggc tgtaatcatt cgctacagcc gggaccttgc cctgctcttt caaaaactgc
     4381 gcggtgtcga tgattgcttt gttcaccggt ccggtcagtt ctgccgtttg ttgctgcggc
     4441 gtcagatagg tatttccctt caccagcccc ggaacgtcac cttcaggcac gccgcttaaa
     4501 cgcgccagtt tgctgatgtt ttccggctgt ttcagccacg cgtcagggtt agcaatgtac
     4561 ggttgctgtg catcgatggc gcttttggcg aacgctttca cgacctcagg atgtttctcg
     4621 gcaaaatctt tgcgcaccac ccagacgtcc agcgttggcg caccccactg cccgacctgt
     4681 tcagaatcgg tcagcacctt gccgtctttt tccagggcgt taaccgccgg tgcccagaca
     4741 taagcaccat caatatcacc ccgctgccat gcggcgataa tcgcgggcgg ctgcaggttc
     4801 acaatctcca cttgccctgg tttaatcccc cagtgtttca gcgccgccag caggctgtag
     4861 tgggtggtgg agataaacgg tacggcaatg cgtttgccaa tcaaatcttc gggtttgctg
     4921 atagttttct ttaccaccag cgcttcggag ttacccagtt ttgacgccag caagaagact
     4981 tcaatcggca cctgttggct ggctgcaacc gctaatgggc tggaaccgag gttgccgatt
     5041 tgcacgtcgc cagaagccag cgcccgcacg atgctggctc cgctgtcaaa cttacgccag
     5101 tccacgctcg ccccgctctc tttagcaaag gtgttgtcgg cctgagccac tttcgccggt
     5161 tcggctgagg tttgatacgc cacggtgacg ttcaccgcct gtgcctgaaa agcgatgaat
     5221 gccagtgcgg caagaagtgt gttacgcgat gaaattgcca tgattgtctg ctcccctgtc
     5281 ttgttatggg agcagtattc aggaataaaa acattcatta aaagaattag tcgttatcgc
     5341 acagatgatt ttattcttag caaaaaaacg gcaaaggaaa gattaaatat gcaattactc
     5401 cgttctaaca attgggaaaa ttactacact tcattttagt gatgcataaa caaccacatt
     5461 acgagattta ttacttcatt atttctatca atgtcaatac atataataaa actattatat
     5521 tcgcattgta tatatcactg tatcattctc aatcactcgc atattacatt cacataatgt
     5581 atataaacaa tacttgttca cagaacatat tttttaaatg caattaattg acaaactaaa
     5641 tcacatctaa atacaatgta taaaacaaaa taactataca taccaaacat acaaacactt
     5701 aacatatgaa ttgcataaaa acattaccca gtcgaacctc cgggtctgaa agcccttgct
     5761 tttcagttat tagcaacatt tataaattaa catctggctg cgccagagat tacgtctctg
     5821 agtgcatcgt tgtgcttgta gtataataaa taaaatggag tgtcattaag tggataaggt
     5881 tttagattca gccctccttt cttcggcaaa taaaagaaag ggtatccttg ctattggcgc
     5941 acatcctgac gatatagaat taggctgtgg cgcacatcct gacgatatag aattaggctg
     6001 tggcgcatcg cttgctcgtc ttgcgcaaaa aggaatttat atcgcagccg tggtgatgac
     6061 taccggcaac tctggcacag atggaataat cgatcgccat gaagaatcgc gcaacgccct
     6121 aaagatatta gggtgccacc aaactattca tcttaatttt gctgacaccc gcgctcattt
     6181 acagctcaat gatatgattt ccgccctgga agacatcatt aaaaatcaaa ttccttctga
     6241 tgttgaaatc atgcgggtat ataccatgca tgatgccgac cgccatcagg atcatctcgc
     6301 tgtttatcaa gcttcaatgg ttgcctgccg cactattcca caaattctcg gctacgaaac
     6361 cccaagtacc tggctttcat ttatgcctca ggtttttgaa tccgttaaag aagaatattt
     6421 cacagtcaaa cttgctgcat taaaaaaaca taaaagccag gaacgacgtg attatatgcg
     6481 tcatgatcgc ctgcgtgcag ttgcacaatt tcgcgggcaa caggtcaata gcgatctggg
     6541 tgaaggcttt gtaattcata aaatgattct ttgagcaaat tgcatgaaaa cctggatatt
     6601 tatctgtatg tccatagcaa tgttgctatg gtttttaagt acgctaagac gtaaacccag
     6661 tcaaaacaaa ggctgtattg acgccattat acctgcgtat aacgaaggcc cgtgtctggc
     6721 gcagtcactg gataatctac tgcgtaaccc ttatttttgc cgggtaattt gcgttaacga
     6781 cggctccacg gacaataccg aagcggtcat ggcggaagtc aaacgcaaat ggggcgaccg
     6841 ctttgttgcc gtcacgcaaa aaaataccgg taaaggtggt gcgctgatga atggcctcaa
     6901 ttacgccacc tgcgaccagg tttttttaag tgatgccgac acctatgttc cgcccgatca
     6961 agacggaatg ggctatatgc tggcagaaat tgagcgcggt gctgatgccg taggcggcat
     7021 tccctctact gcgttgaaag gcgcggggct gttaccgcac atccgcgcga ccgtaaagtt
     7081 gctgatgatt gttatgaagc gcacgctaca gcagctcctg ggcggcgcac cgtttattat
     7141 cagcggtgcc tgcgggatgt tccgtactga tgtattgcgt aagttcggtt tctcggatcg
     7201 tactaaagtc gaagaccttg atctcacctg gacattagtg gcaaacggct accgtattcg
     7261 gcaggcgaat cgctgcatcg tatacccaca ggaatgcaac agcccgcgtg aggagtggcg
     7321 tcgctggcgg cgttggattg tgggatacgc ggtctgtatg cgcctgcata aaagactttt
     7381 atttagccgc ttcggtatct tcagtatatt tcctatgctg ttggttgtgc tttatggcgt
     7441 tgggatttat ctcactacct ggtttaatga attcatcacc accgggccgc atggtgtggt
     7501 gttggcaatg tttccgctta tctgggtcgg cgtagtttgt gttattggtg cttttagcgc
     7561 ctggtttcat cgttgctggt tgttggtgcc tttagcgccg ctttccgttg tgtatgtatt
     7621 attagcttat gccatctgga ttatttatgg acttattgcc ttttttactg gacgcgaacc
     7681 tcagcgcgac aaacccaccc gctgttccgc actggtggaa gcgtcaaccg cttattccca
     7741 accttctgtc acaggaactg aaaaactatc tgaagcttaa tgttaaagag aaaaatattc
     7801 agattgcaga ccaggtaatt attgatgaaa ctgcaggtga agttgttatc ggcgcgaata
     7861 cccgtatttg tcatggtgcc gttattcagg gtccggtagt gattggcgca aactgcctga
     7921 taggtaatta tgcgtttatt cgtcctggca caataatcag caatggtgta aaaattggtt
     7981 ttgccaccga aattaaaaat gcggttattg aagcggaagc aacgattggt ccgcaatgtt
     8041 ttattgccga ctcggtagtt gcaaaccagg catatttggg cgcacaagta cgtaccagta
     8101 atcatcgtct ggatgaacag cctgtgtctg ttcgaactcc agagggaatt atcgctaccg
     8161 gatgcgataa attaggttgt tatatcgggc agcgttcacg ccttggcgta caagttatta
     8221 ttttgcctgg gcgaattatt tccccgaaca cgcaacttgg cccgcgcgtg attgtagaac
     8281 gtaatttacc taccggaact tattcactcc gacaagaact tatccgtaca ggagattaaa
     8341 atgataaaac ggacgttatt agcggcggcc atttttagcg cattgcccgc ttatgccggg
     8401 ttaacttcca ttaccgcggg ctacgatttc accgattatt ctggtgatca tggcaaccg
//
LOCUS       DAJVTL010000165         8399 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.167, whole genome shotgun sequence.
ACCESSION   DAJVTL010000165 DAJVTL010000000
VERSION     DAJVTL010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8399
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.167"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(21..587)
                     /gene="satP"
                     /locus_tag="OQQ26_003812"
     CDS             complement(21..587)
                     /gene="satP"
                     /locus_tag="OQQ26_003812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HCS1859113.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
                     YGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
                     LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
                     GASAIYLAMGEVLNEQFGRTVLPIGESH"
     gene            complement(736..1449)
                     /gene="msyB"
                     /locus_tag="OQQ26_003813"
     CDS             complement(736..1449)
                     /gene="msyB"
                     /locus_tag="OQQ26_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HCS1859114.1"
                     /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM
                     RNELFKSMEGHPEQHRRNWQLIARELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
                     KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKL
                     LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT
                     IPAVLQIACLRRMVSATQV"
     gene            complement(1475..1879)
                     /locus_tag="OQQ26_003814"
     CDS             complement(1475..1879)
                     /locus_tag="OQQ26_003814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HCS1859115.1"
                     /translation="MKSVFTISASLAISLMLCCTAQANDHKILGVIAMPRNETNDLAL
                     KLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININS
                     DNDNKRCVSKITFSGHTVNSSDMATLKIIGDD"
     gene            2256..4172
                     /gene="dnaK"
                     /locus_tag="OQQ26_003815"
     CDS             2256..4172
                     /gene="dnaK"
                     /locus_tag="OQQ26_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HCS1859116.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
                     VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            4261..5391
                     /gene="dnaJ"
                     /locus_tag="OQQ26_003816"
     CDS             4261..5391
                     /gene="dnaJ"
                     /locus_tag="OQQ26_003816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HCS1859117.1"
                     /translation="MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFGDIFGDVFGDIF
                     GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
                     CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
                     GVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
                     GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN
                     EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
     gene            complement(5495..5647)
                     /gene="mokC"
                     /locus_tag="OQQ26_003817"
     CDS             complement(5495..5647)
                     /gene="mokC"
                     /locus_tag="OQQ26_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin MokC"
                     /protein_id="HCS1859118.1"
                     /translation="MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVF
                     TAYESE"
     gene            6233..7399
                     /gene="nhaA"
                     /locus_tag="OQQ26_003818"
     CDS             6233..7399
                     /gene="nhaA"
                     /locus_tag="OQQ26_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HCS1859119.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAILAMIMANNGATSGWYHDFLET
                     PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
     gene            7465..8364
                     /gene="nhaR"
                     /locus_tag="OQQ26_003819"
     CDS             7465..8364
                     /gene="nhaR"
                     /locus_tag="OQQ26_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705976.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HCS1859120.1"
                     /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
                     RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
                     LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
                     FSVRIGECGVSFWCTNPPPEKPFPACLEDRRLLIPGRRSMLGRKLLNWFNSQGLNVEI
                     LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
                     IQHPAVQRICNTDYSALFSPAAR"
BASE COUNT         2109 a         2001 c         2192 g         2097 t
ORIGIN      
        1 gcggggggat ctcaaaacaa ttagtgggat tcaccaatcg gcagaacggt tcgaccaaac
       61 tgctcgttca gaacttcacc catcgccaga tagattgcgc tggcaccgca gatcagacca
      121 atccagccgg caaagtggat gattgcggcg ttaccggcaa tgttaccgat cgccagcagg
      181 gcaaacagca cggtcaggct aaagaaaacg aattgcagaa cgcgtgcgcc tttcagcgtg
      241 ccgaagaaca taaatagcgt aaatacgccc cacagaccca ggtagacacc aaggaactgt
      301 gcatttggcg catcggtcag acccagtttc ggcatcagca gaatcgcaac cagcgtcagc
      361 cagaaagaac cgtaagaggt gaatgcggtt aaaccgaaag tgttgccttt tttgtactcc
      421 agcagaccgg caaaaatttg cgcgatgccg ccgtagaaaa tgcccatggc aagaataata
      481 ccgtccagag cgaaataacc cacgttgtgc aggttaagca gaatggtggt catgccgaag
      541 cccatcaggc ccagcggtgc cggattagcc aacttagtgt tgcccataat tcctcaaaaa
      601 tcatcatcga atgaatggtg aaataatttc cctgaataac tgtagtgttt tcagggcgcg
      661 gcataataat cagccagtgg ggcagtgtct acgatctttt gaggggaaaa tgaaaatttt
      721 ccccggtttc cggtatcaga cctgagtggc gctaaccatc cggcgcaggc aggcgatttg
      781 cagtacggct ggaatcgtca cgcgataggc gctgccgctg accgctttaa ccccatttag
      841 tgccgcgcct acagggcctc ccagccccgc accgcgcagc aaaccatgcc caagtacgct
      901 cattgctgcg tgggtgcgta aaatgcgggt cagttggctg gaaagcaaat gcgacacgcc
      961 ttttgccaat aatttgtctt tcatcagcag cggcagcagc tcttccagct cattcaccct
     1021 cgcatcgacc gcgtgcagaa actcctgctt atgttcctcg tccattttct tccaggtatt
     1081 acgcagaaat tgttccagta actgttgctc aatttcaaac gtagacatct ctttgtcggc
     1141 tttcagcttc aatcgctttg aaacatcgag caaaatggcc cgatacaatt taccgtgtcc
     1201 gcgcagtttg ttggcgatac tatcgccacc aaaatgttgt aattctctgg caatcagctg
     1261 ccaattgcgg cgatgttgct cgggatgtcc ttccatcgat ttaaacagtt cgttgcgcat
     1321 cagtacgctg gagaggcgag ttttgccttt ttcattatgg gtgagcagcc gggcgaaatt
     1381 tgccaactgt tcctcactgc aatgctggag aaaatccaga tctgaatcat tcaggtaatt
     1441 aacattcatt ttttgtggct tctatattct ggcgttagtc gtcgccgata attttcagcg
     1501 tggccatatc cgatgagttc accgtatgac cggaaaaggt gatttttgag acgcagcgtt
     1561 tattgtcgtt atcgctgtta atgttgatcc agtcagtggt ttgcccttct tttatttctg
     1621 aaggaatatt caggctctga ctggcgctac gggcggcttt gaaataaacc gatgcaccgc
     1681 ttaactgtaa atcgccatgg tcggcagaga gttgtatgcg tttaacaatt cggcaaacag
     1741 gaagtttcag cgccagatcg ttggtttcgt tacgtggcat cgcaatgacg ccgaggattt
     1801 tatggtcgtt tgcctgcgcc gtgcagcaca gcatcagact aatcgccagg ctggcggaaa
     1861 tcgtaaaaac ggatttcata aggattctct tagtggggag aggtaggggg atggataccc
     1921 actagtttac tgctgataaa gagaagattc aggtgcgtaa tgttttcttt ttattacaat
     1981 tttttgatga atgtcttggc tgcgattcat tctttatatg aataaaattg ctgtcagttt
     2041 cacgtcttgt cctgctatat cgcgaaattt ctgcgcaaaa gcacaaaaaa tttttgcatc
     2101 tcccccttga tgacgtgggt tacgacccca tttagtagtc aaccgcagtg agtgagtctg
     2161 caaaaaaatg aaattgggca gttgaaacca gacgtttcgc ccctattaca gactcacaac
     2221 cacatgatga ccgaatatat agtggagacg tttagatggg taaaataatt ggtatcgacc
     2281 tgggtactac caactcttgt gtagcgatta tggatggcac cactcctcgc gtgctggaga
     2341 acgccgaagg cgatcgcacc acgccttcta tcattgccta tacccaggat ggtgaaactc
     2401 tggttggtca gccggctaaa cgtcaggcag tgacgaaccc gcaaaacacc ctgtttgcga
     2461 ttaaacgcct gattggccgc cgcttccagg acgaagaagt acagcgtgat gtttccatca
     2521 tgccgttcaa aattattgct gctgataacg gcgacgcttg ggtcgaagtt aaaggccaga
     2581 aaatggcacc gccgcagatc tctgctgaag tgctgaaaaa aatgaagaaa accgctgaag
     2641 attacctggg tgaaccggta actgaagctg ttatcaccgt accggcatac tttaacgatg
     2701 ctcagcgtca ggcaacgaaa gacgcaggcc gtatcgctgg tctggaagta aaacgtatca
     2761 ttaacgaacc aaccgcagct gcgctggctt acggtctgga caaaggtact ggcaaccgta
     2821 ctatcgcggt ttatgacttg ggtggtggta ctttcgatat ttctattatc gaaatcgacg
     2881 aagttgacgg cgaaaaaacc ttcgaagttc tggcaaccaa cggtgatacc cacctgggtg
     2941 gtgaagactt cgacagccgt ctgatcaact acctggttga agaattcaag aaagatcagg
     3001 gcattgacct gcgcaacgat ccgctggcaa tgcagcgcct gaaagaagcg gcagaaaaag
     3061 cgaaaatcga gctgtcttcc gctcagcaga ccgacgttaa cctgccgtac atcactgcag
     3121 acgcgaccgg tccgaaacac atgaacatca aagtgactcg tgcgaaactg gaaagcctgg
     3181 ttgaagatct ggtaaaccgt tctattgagc cgctgaaagt tgcactgcag gacgctggcc
     3241 tgtccgtatc tgatatcgac gacgttatcc tcgtgggtgg tcagactcgt atgccaatgg
     3301 ttcagaagaa agttgctgag ttctttggta aagagccgcg taaagacgtt aacccggacg
     3361 aagctgtagc aatcggtgct gctgttcagg gtggtgttct gactggtgac gtaaaagacg
     3421 tactgctgct ggacgttacc ccgctgtctc tgggtatcga aaccatgggc ggtgtgatga
     3481 cgacgctgat cgcgaaaaat accactatcc cgaccaagca cagccaggtg ttctctaccg
     3541 ctgaagacaa ccagtctgcg gtaaccatcc atgtgctgca gggtgaacgt aaacgtgcag
     3601 ctgataacaa atctctgggt cagttcaacc tggatggtat caacccggca ccgcgcggca
     3661 tgccgcagat cgaagttacc ttcgatatcg atgctgacgg tatcttgcac gtttccgcga
     3721 aagataaaaa cagcggtaaa gagcagaaga tcaccatcaa ggcttcttct ggtctgaacg
     3781 aagatgaaat ccagaaaatg gtacgcgacg cagaagctaa cgccgaagct gaccgtaagt
     3841 ttgaagagct ggtacagact cgcaaccagg gcgaccatct gctgcacagc acccgtaagc
     3901 aggttgaaga agcaggcgac aaactgccgg ctgacgacaa aactgctatc gagtctgcgc
     3961 tgactgcact ggaaactgct ctgaaaggtg aagacaaagc cgctatcgaa gcgaaaatgc
     4021 aggaactggc acaggtttcc cagaaactga tggaaatcgc ccagcagcaa catgcccagc
     4081 agcagactgc cggtgctgat gcttctgcaa acaacgcgaa agatgacgat gttgtcgacg
     4141 ctgaatttga agaagtcaaa gacaaaaaat aatcgcccta taaacgggta attatactga
     4201 cacgggcgaa ggggaatttc ctctccgccc gtgcattcat ctaggggcaa tttaaaaaag
     4261 atggctaagc aagattatta cgagatttta ggcgtttcca aaacagcgga agagcgtgaa
     4321 atcaaaaagg cctacaaacg cctggccatg aaataccacc cggaccgtaa ccagggtgac
     4381 aaagaggccg aggcgaaatt taaagagatc aaggaagctt atgaagttct gaccgactcg
     4441 caaaaacgtg cggcatacga tcagtatggt catgctgcgt ttgagcaagg tggcatgggc
     4501 ggcggcggtt ttggcggcgg cgcagacttc ggcgatattt ttggtgacgt tttcggcgat
     4561 atttttggcg gcggacgtgg tcgtcaacgt gcggcgcgcg gtgctgattt acgctataac
     4621 atggagctca ccctcgaaga agctgtacgt ggcgtgacca aagagatccg cattccgact
     4681 ctggaagagt gtgacgtttg ccacggtagc ggtgcaaaac caggtacaca gccgcagacc
     4741 tgtccgacct gtcatggttc tggtcaggtg cagatgcgcc agggattctt cgctgtacag
     4801 cagacctgtc cacactgtca gggccgcggt acgctgatca aagatccgtg caacaaatgt
     4861 catggtcatg gtcgtgttga gcgcagcaaa acgctgtccg ttaaaatccc ggcaggggtg
     4921 gacactggag accgcatccg tcttgcgggc gaaggtgaag cgggcgagca tggcgcaccg
     4981 gcaggcgatc tgtacgttca ggttcaggtt aaacagcacc cgattttcga gcgtgaaggc
     5041 aacaacctct attgcgaagt cccgatcaac ttcgctatgg cggcgctggg tggcgaaatc
     5101 gaagtaccga cccttgatgg tcgcgtcaaa ctgaaagtgc ctggcgaaac ccagaccggt
     5161 aagcttttcc gtatgcgcgg taaaggcgtc aagtctgtcc gcggtggcgc acagggtgat
     5221 ttgctgtgcc gcgttgtcgt cgaaacaccg gtaggcctga acgagaagca gaaacagttg
     5281 ctgcaagagc tgcaagaaag cttcggtggc ccaaccggtg agcacaacag cccgcgctca
     5341 aagagcttct ttgatggtgt gaagaagttt tttgacgacc tgacccgcta acctccccaa
     5401 aagcctgccc gtgggcaggc ttgggtaaaa ttagggtgcg ttgaagatat gcgagcacct
     5461 gaaaagtggc ggggatcact ccccgccgtt gctcttactc ggattcgtaa gccgtgaaaa
     5521 cagcaacctc cgtctggcca gttcggatgt gaacctcaca gaggtctttt ctcgttacca
     5581 gcgccgccac tacggcggtg atacagatga cgatcagggc gacaatcatc gccttatgct
     5641 gcttcattgc tctcttctcc ttgaccttac ggtcagtaag aggcactcta catgtgttca
     5701 gcatataggg ggcctcgggt tgatggtaaa atatcactcg gggcttttct ctatctgccg
     5761 ttcagctaat gcctgagaca gacagcctca agcacccgcc gctattatat cgctctcttt
     5821 aacccatttt gttttatcga ttctaatcct gaagacgcct tgcatttttg tggcgtaatt
     5881 ttttaatgat ttaattattt aactttaatt tatctcttca tcgcaattat tgacgacaag
     5941 ctggattatt tttgaaatat tggcctaaca agcatcgccg actgacaaca aattaattat
     6001 tacttttcct aattaatccc tcaggaatcc tcaccttaag ctatgattat ctgggcttag
     6061 ggtcactcgt gagcgcttac agccgtcaaa aacgcatctc accgctgatg gcgcaaattc
     6121 ttcaatagct cgtaaaaaac gaattattcc tacactataa tctgatttta acgatgattc
     6181 gtgcggggta aaatagtaaa aacgatctat tcacctgaaa gagaaataaa aagtgaaaca
     6241 tctgcatcga ttctttagca gtgatgcctc gggaggcatt attcttatca ttgccgctat
     6301 cctggcgatg attatggcca acaacggcgc aaccagtgga tggtatcacg actttctgga
     6361 gacgccggtt cagctccggg ttggttcact cgaaatcaac aaaaacatgc tgttatggat
     6421 aaatgacgcg ctgatggcgg tatttttcct gttagtcggt ctggaagtta aacgtgaact
     6481 gatgcaagga tcgctagcca gcttacgcca ggccgcattt ccagttatcg ccgctattgg
     6541 tgggatgatt gtgccggcat tactctatct ggcttttaac tatgccgatc cgattacccg
     6601 cgaagggtgg gcgatcccgg cggctactga cattgctttt gcacttggtg tactggcgtt
     6661 gttgggaagt cgtgttccgt tagcgctgaa gatctttttg atggctctgg ctattatcga
     6721 cgatcttggg gccatcatta tcatcgcatt gttctacact aatgacttat cgatggcctc
     6781 tcttggcgtc gcggctgtag caattgcggt actcgcggta ttgaatctgt gtggtgtacg
     6841 ccgcacgggc gtctatattc ttgttggcgt ggtgttgtgg actgcggtgt tgaaatcggg
     6901 ggttcacgca actctggcgg gggtaattgt cggcttcttt attcctttga aagagaagca
     6961 tgggcgttct ccagcgaagc gactggagca tgtgttgcac ccgtgggtgg cgtatctgat
     7021 tttgccgctg tttgcatttg ctaatgctgg cgtttcactg caaggcgtca cgctggatgg
     7081 cttgacctcc attctgccat tggggatcat cgctggcttg ctgattggca aaccgctggg
     7141 gattagtctg ttctgctggt tggcgctgcg tttgaaactg gcgcatctgc ctgagggaac
     7201 gacttatcag caaattatgg cggtggggat cctgtgcggt atcggtttta ctatgtctat
     7261 ctttattgcc agcctggcct ttggtagcgt agatccagaa ctgattaact gggcgaaact
     7321 cggtatcctg gtcggttcta tctcttcggc ggtaattgga tacagctggt tacgcgttcg
     7381 tttgcgtcca tcagtgtgac aggacggttt accggggagc cataaacggc tcccttttca
     7441 ttgttatcag ggagagaaat gagcatgtct catatcaatt acaaccactt gtattacttc
     7501 tggcatgttt ataaagaagg ttccgtggtt ggtgcagcgg aggcgcttta tttgacacca
     7561 caaaccatta ccggacagat ccgggctctg gaagagcgcc tgcaaggcaa attatttaag
     7621 cgcaagggac gtggtctcga acccagcgag ctgggagagc tggtctatcg ctatgccgat
     7681 aaaatgttca ccttaagcca ggaaatgctg gatatcgtga actatcgcaa agaatccaat
     7741 ttattgtttg acgttggcgt ggctgatgca ctttccaaac gcctggtcag tagcgtgctg
     7801 aatgctgcag tagtagaagg cgaaccgatt catcttcgct gcttcgaatc cacccacgaa
     7861 atgctgctgg agcaattaag ccagcataaa ctggatatga tcatttccga ctgtccgata
     7921 gattctacgc agcaggaagg cctgttctcc gtgagaattg gcgaatgtgg cgtgagcttc
     7981 tggtgtacaa atccaccacc ggaaaaaccg ttcccggctt gtctggaaga ccggcggctt
     8041 ttgattcctg ggcgacgttc aatgttaggg cgtaaattgc ttaactggtt taactcccag
     8101 ggattaaacg tagaaatcct tggcgagttt gatgatgccg cgttgatgaa agcttttggt
     8161 gcaatgcaca atgcaatctt cgttgcccca acgctttatg catatgactt ttatgccgat
     8221 aaaactgtcg tagaaattgg tcgcgtcgag aatgtgatgg aagagtacca tgctattttt
     8281 gctgagcgga tgattcagca cccggcggta cagcgaatct gcaatacgga ttattctgcg
     8341 ctttttagtc cagcggcgcg ttaatcggca gctcccccaa agttaaagtg ggggagata
//
LOCUS       DAJVTL010000166         8195 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.168, whole genome shotgun sequence.
ACCESSION   DAJVTL010000166 DAJVTL010000000
VERSION     DAJVTL010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8195
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.168"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            108..809
                     /gene="ydiV"
                     /locus_tag="OQQ26_003820"
     CDS             108..809
                     /gene="ydiV"
                     /locus_tag="OQQ26_003820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor"
                     /protein_id="HCS1859121.1"
                     /translation="MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIP
                     TSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAG
                     ELLKYPFIELLINENYPHFNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
                     RVMLDKSQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCL
                     WPAVPINQITTLVQR"
     gene            872..2308
                     /locus_tag="OQQ26_003821"
     CDS             872..2308
                     /locus_tag="OQQ26_003821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HCS1859122.1"
                     /translation="MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIP
                     SSLFKNAAGVWGGETLLPGMSPLAQVYSGHQFGVWAGQPGDGRGILLGEQLLADGTTM
                     DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
                     TVEPGAMLMRVAPSHLRFGHFEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLW
                     FNDVVARTASLIAQWQTVGFAHRVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
                     HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
                     FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW
                     FARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEAL
                     RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
     gene            complement(2312..2503)
                     /gene="hemP"
                     /locus_tag="OQQ26_003822"
     CDS             complement(2312..2503)
                     /gene="hemP"
                     /locus_tag="OQQ26_003822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HCS1859123.1"
                     /translation="MRYTDNRKLTPETDANHKTASPQPIRRITSQTLLGPDGKLIIDH
                     DGQEYLLRKTQAGKLLLTK"
     gene            complement(2635..3681)
                     /gene="aroH"
                     /locus_tag="OQQ26_003823"
     CDS             complement(2635..3681)
                     /gene="aroH"
                     /locus_tag="OQQ26_003823"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HCS1859124.1"
                     /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK
                     ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTE
                     RLVEKLASAVDTRF"
     gene            complement(3838..4671)
                     /gene="ppsR"
                     /locus_tag="OQQ26_003824"
     CDS             complement(3838..4671)
                     /gene="ppsR"
                     /locus_tag="OQQ26_003824"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HCS1859125.1"
                     /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
                     NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
                     Y"
     gene            5003..7381
                     /gene="ppsA"
                     /locus_tag="OQQ26_003825"
     CDS             5003..7381
                     /gene="ppsA"
                     /locus_tag="OQQ26_003825"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HCS1859126.1"
                     /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
                     VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQP
                     ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
                     KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
                     VFITSAWGLGEMVVQGAVNPDEFYVYKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG
                     KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ
                     ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL
                     VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV
                     TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVG
                     LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL
                     GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL
                     ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
                     SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
                     AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
     gene            complement(7438..>8195)
                     /locus_tag="OQQ26_003826"
     CDS             complement(7438..>8195)
                     /locus_tag="OQQ26_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310435.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HCS1859127.1"
                     /translation="QPADLSALRFFLCGGTTIPKKVARECQQLGIKLLSVYGSTESSP
                     HAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDE
                     PELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHP
                     KIHDACVVAMPDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVI
                     EKLPRTASGKIQKFLLRKDIMLRLTQDVCEEIE"
BASE COUNT         1995 a         1978 c         2141 g         2081 t
ORIGIN      
        1 gttaacatgg aacaaatgaa agttactcct tctgtaattg ttatgtctta tggcctcatc
       61 ccttttagcc ggatactgaa aaacatcctt cgagagggac ggttaccatg aagatttttt
      121 tggagaatct ttatcattct gattgctatt tcctgccgat aagagataac cagcaagtcc
      181 ttgtcggcgt tgagttaatt acccatttct ccagtgaaga tggcacggtg cgtatcccga
      241 cgagtcgggt tatagcgcaa cttaccgagg agcaacattg gcaattattt tcagagcagt
      301 tggaattact aaaatcatgc caacattttt ttattcaaca taaactcttt gcctggctta
      361 atttaacgcc acaagtggct acattattat tagagaggga taattacgca ggcgaactat
      421 taaaatatcc gtttattgaa ctgttgatta atgagaatta cccgcatttc aatgaaggaa
      481 aagataatcg cggtctttta tccttatcgc aagtgtatcc ccttgtgtta ggtaatttgg
      541 gagcaggcaa tagcacaatg aaagcggttt ttgatggtct tttcacccgc gtcatgctgg
      601 ataaaagtca aatcacgcac cgctccttcg aaccgtttat tcgtgcgatc caggcgcaaa
      661 tttccccttg ttgcaattgc atcatcgcgg gaggcattga tacggcagaa atattggcac
      721 agattacccc cttcgatttc catgctctcc agggatgcct gtggcctgcc gttcctataa
      781 atcagataac gacgttggtt cagcgataac cctcctgttt gctggtgttt aagacgagag
      841 taaccgtcta cactatcaaa caggaggatc tatgaccctg tcttttatta cccgctggcg
      901 cgatgaattg ccagaaacct atacagcact ttcccctacg cctttaaata atgcccggct
      961 gatttggcat aataccgaac tcgctaacac gctgagtatt ccatcgtcgc tgtttaaaaa
     1021 tgccgcaggt gtctggggcg gcgaaaccct actgcctggt atgtcaccac tggcacaggt
     1081 ttacagtggt catcagttcg gcgtctgggc gggccaaccg ggtgatgggc gcggcatttt
     1141 acttggcgaa caactgcttg ctgatggcac tacaatggac tggcatctga aaggtgctgg
     1201 cctgacgcct tattcgcgaa tgggtgatgg acgggcggtt ttacgttcga cgatacgaga
     1261 aagtctcgcc agtgaggcga tgcattatct gggcattccg acgacccgcg cgttaagtat
     1321 cgtcaccagc gattcgccag tgtatcggga aacggtggag ccaggcgcga tgctgatgcg
     1381 tgtggcacca agtcatctgc gctttggtca tttcgaacat ttttactatc gccgcgagcc
     1441 ggaaaaggtt cgtcagttgg ctgactttgc cattcgtcat tactggtcac atcttgaaga
     1501 cgatgaggac aaataccgtc tctggtttaa cgatgttgtc gcacgtaccg cgtcgttaat
     1561 tgcccaatgg cagacggtcg gctttgcaca tagggtgatg aataccgaca acatgtcgct
     1621 gctgggactg acgcttgatt acgggccgtt tggttttctt gatgattacg aacccggttt
     1681 tatttgtaat cactcggatc atcaagggcg ttatagcttt gataatcaac ctgctgtcgc
     1741 gttgtggaat ttacagcgtc tggcgcagac attgtcacca tttgttgccg tagatgccct
     1801 gaatgaggcc ctggacagct atcagcaggt tttgttgacg cattatggac aacggatgcg
     1861 gcagaaactg ggcttcatga cggagcaaaa agaggataac gcgctactga atgaattatt
     1921 cagtctgatg gcgcgagagc gcagcgatta tacccgcaca ttccgcatgc tgagtctgac
     1981 cgagcagcac agcgcggcgt caccgctacg tgatgagttt attgatcgtg cggcatttga
     2041 tgactggttt gcccgttatc gggggcgttt gcaacaagac gaggttagcg atagtgagcg
     2101 tcagcaactg atgcaaagcg ttaacccagc tctggtattg cgcaactggt tggcgcaacg
     2161 ggcgattgaa gcggcagaaa agggtgatat gacggaattg caccgcctgc atgaggcgtt
     2221 gcgaaatcct ttcagcgaca gagatgatga ctatgtcagt cgtccacctg actggggtaa
     2281 acggctggaa gtcagctgct cgagttaaag gctacttagt taacagcagc ttgccagcct
     2341 gagttttacg gagcagatat tcttgcccgt catgatcgat aatcagtttg ccatccggac
     2401 ctaacagtgt ctggctggta attcgccgga tgggctgcgg ggaagcggtc ttgtgattgg
     2461 catccgtttc aggcgtgagt tttctgttat ccgtataacg cataaaaatt aataataatt
     2521 gatataacaa tgattcttat tatcaatatt gtggcaggcc agagcaagca gtaatgtgtt
     2581 gagaagacaa caagttgcgc agaaatgccc atcccatcag gaatgggcac gcattcagaa
     2641 gcgggtatct accgcagagg cgagtttttc gaccaggcgt tcggtatctt cccagcccag
     2701 acacgggtcg gtaatggatt gaccgtaagt gagcggctga ccgccgacga ttttttgcgt
     2761 tccttcgcgc aggaaacttt ccgccataat tccagcaatc gccgtagagc cattgcggat
     2821 ttgctgacaa atatcctcac aaacttctaa ctggcgacgg tgctgcttct ggcagttacc
     2881 gtggctgaaa tccaccacca gatgttcagg taaatcaaac tcgtgcagcg tatcgcaggc
     2941 tgcggcgata tcatcggcat gataattcgg ttttttgccg ccacgcataa taatgtggcc
     3001 atacgggttg ccgctggtct gatagatggt catctgacca tttttgtctg gcgagaggaa
     3061 catatggctg gcgcgggctg cgcggatagc atccacggca atccgcgtgt tgccatcggt
     3121 accattttta aaacctaccg gacaggagag tgctgaagcc atttcgcggt ggatctgact
     3181 ttcggtagta cgagcgccaa tcgcgcccca actgattaaa tcagcaataa actgaccggt
     3241 caccatatcg aggaactcag tcgcggtagg gacacccagc tcatttacct gtaaaagtaa
     3301 tttgcgcgcc agctccagac cgtgatttac ccgatagctg ccgtttaaat ccggatcgga
     3361 gattagccct ttccagccga caacagttcg tggtttttca aaataggtgc gcattacgat
     3421 ttccagccgt gactggtact ggttgcgcag cgactgcaga cgggtggcgt actccattgc
     3481 agcggtgaga tcgtggatcg agcaggggcc aataatgacc aacagtcgct tatcttcacc
     3541 attcagtatt ttttcaattc tgcggcggga gtcggtgaca tgggtggcga cgccaggcgt
     3601 tacgggatac cgtagcgcga gttcggcggg cgttaccagg ctctcaatac gcgcagtacg
     3661 gagttcgtca gttctgttca ttgcaagtct cagaaatttg ttgcttctac ggcaggactg
     3721 ccgggaagtg atgcgcatca cgataaacca atcgctgctg atttcaagtg cgaggtgtgt
     3781 cacacctcgc cgggtggtta gcatgataac aaaaaaacaa gccaatgcac tagttctcta
     3841 gtacattcgg cgactaaggc ccatgatatc gaggatcttg gtggcaatct cttctaccga
     3901 ataattggta ctgttaatcc acgggatctg atttttacgg tacaaggctt ccacttccgc
     3961 gacttccatc ctgcactgac gaagcgaggc atagcgactg ttctcccgac gttcctcgcg
     4021 aatcgccgcc agacgttccg ggtcgatagt caggccgaac aatttatgct gaagcggttt
     4081 gagcgacgcg ggtagcacca gattatccat atcgtcggca ataaaggggt agtttgccgc
     4141 gcggatacca aattgcattg ccagatacag actggtgggg gttttaccac agcgagaaac
     4201 accgagcagg atcacctgag cctgatccag attgcgcaac gaaatgccgt catcgtgggc
     4261 gagggtgtaa tcaatcgccg caatgcgcgc atcatattta ttgagattat tagggttaag
     4321 gccatgggta cgatgagcaa tcggcgttgg atccagtttc atctcttgtt gtagcggggc
     4381 aaccagcgcc tgaacgatat cctggcaaaa gccttcactt tgcaagatga tggcgcgaat
     4441 ctccggcaac acgatggagt agaagaccag cgggcgcacg cctgtctggt gataaattgc
     4501 gtcaatctga tccttcactg cccgtgcacg gctctcattt tcgacaaacg gcagcgtgat
     4561 gctgctgata gtgacgggaa attgtgacat tactgcgtgt cctaatacct ccgcagttat
     4621 tgccgtacca tcagaaatat aaaaaacgtg gcgatcaaca gcattatcca ttttgttctt
     4681 cccgtgatgc agacataatt ctatgaaagc ataaattaaa aacgcacaga agcgtagaac
     4741 gttatgtctg gtttataaaa tgaaccttca attttatttt ttatgaaaac agcatttcat
     4801 ttttacggtt tcgtttatac cgatggttta tgtggaaatt gtcgaagaga gcagatttgc
     4861 gcaacgctgg gatcagtctt aaaaagtaaa aaatatattt gcttgaacga ttcaccgttt
     4921 ttttcatccg gttaaatatg caaagataaa tgcgcagaaa tgtgtttctc aaaccgttca
     4981 tttatcacaa aaggattgtt cgatgtccaa caatggctcg tcaccgctgg tgctttggta
     5041 taaccaactc ggcatgaatg atgtagacag ggttgggggc aaaaatgcct ccctgggtga
     5101 aatgattact aacctttccg gaatgggtgt ttccgttccg aatggtttcg ccacaaccgc
     5161 cgacgcgttt aaccagtttc tggaccaaag cggcgtaaac cagcgcattt atgaactgct
     5221 ggataaaacg gatattgacg atgttaccca gcttgcgaaa gcgggcgcgc aaatccgcca
     5281 gtggattatc gacactccct tccagcctga gctggaaaac gccatccgcg aagcctatgc
     5341 acagctttcc gccgatgacg aaaacgcctc ttttgcggtg cgctcctccg ctactgcaga
     5401 agatatgccg gacgcttcct ttgctggtca gcaggaaacc ttcctcaacg ttcagggttt
     5461 tgatgccgtt ctcgtggcag tgaaacatgt atttgcttct ctgtttaacg atcgcgccat
     5521 ctcttatcgt gtgcaccagg gttacgatca ccgtggcgtg gcgctctctg ccggtgttca
     5581 gcggatggtg cgctccgacc tcgcatcttc tggcgtgatg ttctccattg ataccgaatc
     5641 cggctttgac caggtggtgt ttatcacttc cgcatggggc cttggggaaa tggtcgtgca
     5701 gggtgcggtt aacccggatg agttttacgt gtataaaccg acactggcgg cgaatcgccc
     5761 ggctatcgtg cgccgcacca tggggtcgaa aaaaatccgc atggtttacg cgccgaccca
     5821 ggagcacggc aagcaggtta aaatcgaaga cgtaccgcag gaacagcgtg acatcttttc
     5881 gctgaccaac gaagaagtgc aggaactggc aaaacaggcc gtacaaattg agaaacacta
     5941 cggtcgccca atggatattg agtgggcgaa agatggccac accggcaaat tgttcattgt
     6001 gcaggcgcgt ccggaaaccg tgcgctcacg cggtcaggtc atggagcgtt atacgctgca
     6061 ttcacagggt aagattatcg ccgaaggccg tgctatcggt catcgcatcg gcgcgggtcc
     6121 ggtgaaagtc atccatgaca tcagcgaaat gaaccgcatc gaacctggcg acgtgctggt
     6181 tactgacatg accgacccgg actgggaacc gatcatgaag aaagcatctg ccatcgtcac
     6241 caaccgtggc ggtcgtacct gtcacgcggc gatcatcgct cgtgaattgg gcattccggc
     6301 ggtagtgggc tgtggtgatg caacagaacg gatgaaagac ggtgagaacg tcactgtttc
     6361 ttgtgccgaa ggtgataccg gttacgtcta tgcggagttg ctggaattta gcgtgaaaag
     6421 ctccagcgta gaaaccatgc cggatctgcc gttgaaagtg atgatgaacg tcggtaaccc
     6481 ggaccgtgct ttcgacttcg cctgcctgcc gaacgaaggc gtgggccttg cgcgtctgga
     6541 atttatcatc aaccgtatga ttggcgtcca cccacgcgca ctgcttgagt ttgacgatca
     6601 ggaaccgcag ttgcaaaacg aaatccgcga gatgatgaaa ggttttgatt ctccgcgtga
     6661 attttacgtt ggtcgtctga ctgaagggat cgcgacgctg ggtgccgcgt tttatccgaa
     6721 gcgcgtcatt gtccgtctct ctgattttaa atcgaacgaa tatgccaacc tggtcggtgg
     6781 tgagcgttac gagccagatg aagagaaccc gatgctcggc ttccgtggcg cgggccgcta
     6841 tgtttccgac agcttccgcg actgcttcgc gctggagtgt gaagcagtga aacgtgtgcg
     6901 caacgacatg gggctgacca acgttgagat catgatcccg ttcgtgcgta ccgtagatca
     6961 ggcgaaagcg gtggttgaag aactggcgcg tcaggggctg aaacgtggcg agaacgggct
     7021 gaaaatcatc atgatgtgtg aaatcccgtc caacgccttg ctggccgagc agttcctcga
     7081 atatttcgac ggcttctcaa ttggctcaaa cgatatgacg cagctggcgc tcggtctgga
     7141 tcgtgactcc ggcgtggtgt ctgaattgtt cgatgagcgc aacgatgcgg tgaaagcact
     7201 gctgtcgatg gctatccgtg ccgcgaagaa acagggcaaa tatgtcggga tttgcggtca
     7261 gggtccgtcc gaccacgaag actttgccgc atggttgatg gaagagggga tcgatagcct
     7321 gtctctgaac ccggacaccg tggtgcaaac ttggttaagc ctggctgaac tgaagaaata
     7381 aaataaatac ccggcggcgt tttatcgccg ggtttatgtg atccccgaag atgaaactta
     7441 ttcaatctct tcacagacat cctgagttaa tcgcagcata atatctttcc ttaacaaaaa
     7501 cttttgtatt ttacctgagg cagtgcgcgg tagtttttcg attaccacga tatgttcagg
     7561 atatttatat tttgcgaccc gtttacggct aaaaaaagcc accacctctt ccagcgataa
     7621 tgaatgatgc ggcgctttca gcacgacata agcgcatgat cgttcaccta aacgttcatc
     7681 gggcattgca accacacagg catcgtgaat tttaggatgc tgcaataaaa tatcttccac
     7741 ttcacggctg ctaatatttt cgccgccacg gacaataata tcttttttgc gtccggttat
     7801 ttttatatag ccagcctcat ccatgcggca gagatcgccg ctgtaatacc agccttcttc
     7861 gtccagcgca cgggcggtta attcaggttc atcaaaatac cccataaaca cattggggcc
     7921 acgcgaggct tcttcacctt cacaacctgg cggtaaggtc ttgcgtgcgt catcgaccac
     7981 tttaatctct acacctgcgg cagcgtaacc atcggtgtgc ataaagcgcg acaaaggatc
     8041 atcgagattc accaccgcat gcggcgaact ttctgtggaa ccataaacac ttaataattt
     8101 aatgccgagc tgctggcatt cacgcgccac ttttttgggg attgtggttc cgccgcaaag
     8161 aaagaaacgc agcgctgaaa ggtccgcggg ttgtt
//
LOCUS       DAJVTL010000167         8011 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.169, whole genome shotgun sequence.
ACCESSION   DAJVTL010000167 DAJVTL010000000
VERSION     DAJVTL010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8011
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.169"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..165
                     /locus_tag="OQQ26_003827"
                     /pseudo
     CDS             1..165
                     /locus_tag="OQQ26_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165333.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            195..446
                     /locus_tag="OQQ26_003828"
     CDS             195..446
                     /locus_tag="OQQ26_003828"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859128.1"
                     /translation="MYICTLCCFAEEVKGDYSHYRTFLFDIGNQYKVKLTQSGKKELS
                     LTLEFNDTIIESQKVTGNKAKHILEDIEKFYRNKPDTYY"
     gene            complement(668..1861)
                     /gene="tyrB"
                     /locus_tag="OQQ26_003829"
     CDS             complement(668..1861)
                     /gene="tyrB"
                     /locus_tag="OQQ26_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HCS1859129.1"
                     /translation="MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIP
                     QLKAVAEAEARLNAQPHGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF
                     NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGF
                     GAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQL
                     KATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM
                     PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
                     FAAVM"
     gene            complement(2114..3193)
                     /gene="alr"
                     /locus_tag="OQQ26_003830"
     CDS             complement(2114..3193)
                     /gene="alr"
                     /locus_tag="OQQ26_003830"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HCS1859130.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNE
                     EQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEKAETFYHRLTQCKNVRQPVNIVSHF
                     ARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVS
                     PLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDNAGDSVILWGEGLPVERI
                     AEITKVSAYELITRLTSRVAMKYVD"
     gene            complement(3246..4661)
                     /gene="dnaB"
                     /locus_tag="OQQ26_003831"
     CDS             complement(3246..4661)
                     /gene="dnaB"
                     /locus_tag="OQQ26_003831"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HCS1859131.1"
                     /translation="MAGNKTFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
                     AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKT
                     AGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASL
                     SRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREH
                     GGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            4744..5727
                     /locus_tag="OQQ26_003832"
     CDS             4744..5727
                     /locus_tag="OQQ26_003832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HCS1859132.1"
                     /translation="MATRIEFHKHGGPEVLQAVEYTPADPAENEIQVENKAIGINFID
                     TYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIN
                     ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW
                     AKALGAKLIGTVGTAQKAQSALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVG
                     RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL
                     TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP"
     gene            complement(5893..6135)
                     /gene="pspG"
                     /locus_tag="OQQ26_003833"
     CDS             complement(5893..6135)
                     /gene="pspG"
                     /locus_tag="OQQ26_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HCS1859133.1"
                     /translation="MLELLFVIGFFVMLMVTGVSLLGIIAALVVVTAIMFLGGMLALM
                     IKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY"
     gene            complement(6269..7306)
                     /gene="dusA"
                     /locus_tag="OQQ26_003834"
     CDS             complement(6269..7306)
                     /gene="dusA"
                     /locus_tag="OQQ26_003834"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HCS1859134.1"
                     /translation="MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYF
                     LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLVEA
                     RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
                     QDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
                     PHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPV
                     AVVRAMYPYIEHELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVL
                     EHALKLVADMR"
     gene            complement(7667..>8011)
                     /locus_tag="OQQ26_003835"
     CDS             complement(7667..>8011)
                     /locus_tag="OQQ26_003835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001560258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HCS1859135.1"
                     /translation="YADLAGRVNINEYNNNYLTAQFEELSQRDMKKYLGEMKRLADGG
                     EMNFDDYLEKMSLLVNEGTLDPDILSKMRDAAPQLISFAKSFDLTSKEEIKILTDTSK
                     LIYDLFGVKSEK"
BASE COUNT         2113 a         2039 c         1880 g         1979 t
ORIGIN      
        1 cactaaataa taaagatatc tcttatgcca aagatttttc ttatgccaaa gatttctttt
       61 tatacataga aacacagtta aaaattgcaa aagatttttg tagacctgga gaagaagtat
      121 caagttctat tgcaagtaaa gtttttcacg catttattaa tttagttaac aaaatcaggg
      181 gtaagaaaga ctttatgtat atttgcacgc tttgctgttt tgccgaggag gttaaaggtg
      241 attattctca ttacaggacc tttttatttg atattggtaa tcaatataag gttaaactta
      301 cacaaagcgg aaaaaaagag ctctctttaa ctttagaatt taacgatact ataattgaat
      361 ctcagaaagt cacaggcaat aaggcaaagc atattcttga ggatatagaa aaattctatc
      421 gtaacaaacc cgatacttat tattaaattt aataatggtt agatgtgcag aaattattac
      481 tccacccaaa aaaacaggat aaggaattcc agataattag gataagctta acaataaaag
      541 aactaataac gtttattatc tctcacgtag aacgatggca tcaaaaaaat catctataaa
      601 gaaagagtga aagcgacgac agtttaattt cactgcaggc tgggtagctc cagcctgctt
      661 tcctgcatta catcaccgca gcaaacgcct ttgccacacg ttgtacattt gccgtattta
      721 acccggcgac acacatgcga ccgctggcga tgagatagac accaaattct tcacgtagtc
      781 ggtcaacctg agcggcactt aaaccggtat aactgaacat gccgcgctga ttaagcagat
      841 aatcgaaatt gcgttctggc atctctgtgc ttaatacctt caccagttcc tgacgcattg
      901 ccagaatgcg agtacgcatc tcttctactt ccgccagcca gctggctttc aatgcctcgt
      961 cattcagcac tgcagccacc acctgcgcac caaaattcgg cgggctggag tagttgcggc
     1021 gaactgttgc tttcaattgc cccagtacgc ggccagcggc ttcggcatct tcacacataa
     1081 cagaaagtcc gccgacgcgc tcgccgtaaa gggagaaaat tttcgagaac gaattgctca
     1141 ccagagcggg taatccagcg ctggcaatgg cgcgaatagc gtaggcatcc tcttccatac
     1201 cggcaccaaa tccttgatag gcaatatcga ggaatggaat aagctcgcgg gctttgagaa
     1261 tttcaatcac cgcatcccac tgatcattag tgagatcggc acccgttggg ttgtggcaac
     1321 atggatgcag caacacaata ctgcgggcag gtaatgtttt cagcgtcgcc aacaggtcat
     1381 taaagcgcac gccgttagtc gcttcgtcat accaagggta agtactcact tcgaatccag
     1441 ccccggcgaa tattgctacg tggttttccc aggtaggatc gctgacccag acgcctgatt
     1501 ccgggaagta gcgtttcagg aaatccgcgc ccactttcaa tgcccctgag ccgccaaggg
     1561 tttgaatggt tgctacgcgc tgttgttgca gtaccggatg gtccgcacca aacagcagcg
     1621 gcgcaatggc atggcgatag ctgttaagcc cttccatcgg taaataaagc gaagcgccat
     1681 ggggctgcgc attcaggcgc gcttccgcct ccgccacggc tttcagttgt ggaataattc
     1741 cgtcttcgtt gtagtacaga ccgatactta aattcacttt gtcgctgcga gggtcttctt
     1801 taaaacgctc cataagcgta agaatcgggt cgccagcgta ggcgtcaact ttttgaaaca
     1861 cgcgatggtt ctccaggttt acgggcaggt ggttaaaaca caataaaccg gaagaaggcg
     1921 aagatcgagt ggatgttcag gagcgaacgg caattagcaa cagagtgaga ctcatgacaa
     1981 acgtacatcc gccagaggca cgacctttat aagagcatga aagaacatca acttattgaa
     2041 ttgataggat tttattggcc ggataaggca ttcacgccgc atccggcaca gataatcgaa
     2101 tattacagaa cgattaatcc acgtatttca tcgcgaccct tgaagtcagg cgcgtgataa
     2161 gttcgtaagc gctcactttc gtaatttcag cgatacgttc tacgggcaaa ccttcgcccc
     2221 ataaaatgac cgagtccccg gcgttgtcct gcgcctgtgg acctaagtct acgcagatca
     2281 tatccatcgc cacgcgcccg acaatcggta cttcgcgacc gttcaccagc actggcgtac
     2341 cggacggcgc ggcgcgcgga taaccatcgc catagcccat cgcgactacg ccaagacggg
     2401 tatcacgttc gcttacccag gttccaccat aaccaacagg ttctccggct ttatgctcac
     2461 gcacggcaat caggctggag gttagtgaca tcactggctg acagccaaaa tcggcaccgg
     2521 tggagcgatc ttccagcgga gatacaccgt aaagaattat gcccgggcgc acccagtcaa
     2581 aatgcgactg tggccagagt agaatgccac ccgacgcggc aatggaacgt tgacctggtt
     2641 tgccttcaca aaaggtatta aagatagcga gttgtttctc ggttgcgcca cattttggtt
     2701 catccgcgcg cgcaaaatgg ctgacgatat ttaccggctg acgaacgttt ttgcactggg
     2761 tcaggcgatg ataaaacgtc tcagcctttt ccggccttac gcccagacgg tgcataccgg
     2821 tatcgagttt catccagacg gtaaccggct cgtccaggct ggcctcttcc agcgcagcaa
     2881 gctgttcttc gttatgcacg gcagtatgaa aatgttgcgc agaaatcgtc ggtagatctc
     2941 tggcatcaaa aaagccttcg agtaaaagta caggtttggt gattcccccc gcacgcagtc
     3001 gcagagcttc ttcgagacgg gctacgccaa aggcgtcagc atcggggagc gttcgcgcgg
     3061 tctcaagaag accgtgacca taagcgttcg ctttcaccac cgcaaccatt ttactggcag
     3121 gtgccagttc acgaagacgt tgcaggttgt gtcgcagagc gcggcggtta atcacaacag
     3181 ttgccgcttg catttgtgtt ccttgataag tgtttgcttt aattacctaa ttcataaaat
     3241 aattattatt cgtcgtcgta ctgcggcccc gcatagttgt cgaagcgcga ccattgaccg
     3301 ttaaaggtca ggcgtaccgt cccgattggg ccgttacgtt gtttaccgat aataatttcc
     3361 gcgatgcctt ttaaatcact gttttcgtga tacacctcat cacgatagat aaacatgatc
     3421 aagtccgcat cctgctcgat agagccagat tcacgcaggt cggagttgac cgggcgtttg
     3481 tcggcacgtt gttccagaga acggttcaac tgggacagcg ccaccaccgg cacgttcagt
     3541 tctttcgcca gtgctttcag cgagcgagag atttctgcaa tttccagcgt acggttatcg
     3601 gaaagcgccg gtacgcgcat cagttgcagg tagtcgatca tgataagccc gatgccgccg
     3661 tgttcacggg caatacggcg tgcgcgggaa cgcacttccg ttggcgtcag gccggaggag
     3721 tcatcgatat agatattgcg tttttcgagc aaaatcccca tggtgccgga aatacgtgcc
     3781 cagtcttcat catcgagctg cccggtacgg attttagtct ggtcaacgcg cgacagcgac
     3841 gccagagaac gcatcatgat ctgttctgat ggcatctcca gcgagaagat aagtaccggt
     3901 ttatcctgca acatcgccgc gttttcgacg aggttcatcg caaatgttgt tttacccatc
     3961 gacggacgcg cggcgacgat gatcaaatcc gacggctgca agccagcggt ttttttgttg
     4021 agatcgtcat aaccggtgtt taccccggta acgccatcgt gtggctgctg aaacaactgc
     4081 tcaatacgcg ccacggttgc gtcgagcaca tcggcgatgt tcttcggccc ttcgtctttg
     4141 tttgcacgac tttcggcaat cttaaagacg cgggattcag caaggtccag cagatcttcg
     4201 ctggtacgcc cctgcggatc aaaaccggct tcagcaatct cattcgcaac cgagatcatc
     4261 tcacggacaa cggcacgttc acgcacgatg tccgcataag cactgatgtt cgccgcactt
     4321 ggcgtatttt ttgacagctc tgccagataa gcaaaaccac cgacgctatc gagttgcccc
     4381 tggcgttcca acgattccgc aagggtaatc agatcgatag gactaccgct ttcctgcaaa
     4441 cgcgccattt cagtaaagat atgacggtgt gggcgggtgt aaaaatcgtc tgctaccaca
     4501 cgctcggcta catcatccca gcgttcgtta tccagcatta aaccgcccaa caccgactgc
     4561 tccgcttcga tcgagtgcgg aggcactttc agcccggcaa cttgtggatc gcgttcgcgg
     4621 ggttcagcct gctgtttgtt gaaggtttta tttcctgcca tagtgaatgg agttaccgag
     4681 ataaagaatg ggtcgaaact ttaccatatg aagcagaccc tgacgatacg ttctggagga
     4741 cacatagcaa cacgaattga atttcacaag cacggtggcc cggaagtact tcaagccgta
     4801 gagtacactc ctgccgatcc ggcggagaat gaaatccagg tcgaaaataa agccatcggc
     4861 atcaatttta tcgacacgta tatccgcagc ggcctttacc cgccgccatc gctacccagc
     4921 ggattaggta ccgaagcggc aggcatcgtg agtaaagtcg gcagtggtgt aaagcatatt
     4981 aaggctggcg atcgtgtagt ctatgcgcag tcggcgttag gcgcttacag ctctgtgcat
     5041 aacattaatg cggataaagc ggcgattctg cctgcggcaa tttcttttga gcaagctgcg
     5101 gcatccttcc tgaaaggctt aacggtttat tatctgctgc gtaaaaccta tgaaattaaa
     5161 cccgatgaac agttcctgtt ccacgcagcg gctggcggcg ttggcttaat tgcctgccag
     5221 tgggcaaaag ccctgggcgc gaaactcatc ggcaccgtag gaaccgcgca aaaagcgcag
     5281 agcgcgctaa aagccggcgc gtggcaggtt attaactatc gtgaagagaa tctggtcgag
     5341 cgattgaaag agatcaccgg cggtaagaaa gtgcgcgtag tgtacgattc cgtgggcaga
     5401 gacacctggg aacggtcgct ggattgcctg caacgccgcg gcttaatggt cagttttggc
     5461 aactcatcag gtgcggttac cggtgtgaac ttaggcattc tcaatcaaaa aggctcgttg
     5521 tatgtgacac gcccttccct gcaaggctat atcaccacgc gggaggaatt aaccgaggcc
     5581 agtaatgaac tgttctcttt gattgccagc ggtgtgatta aggtcgatgt cgccgagcag
     5641 cagaaatatc cgctgaagga tgcgcagcgt gcgcatgaga ttctggaaag ccgggcgacg
     5701 caaggttcca gcctgctgat tccataaaag aaatagggct tccacctggg aagccctttc
     5761 tttttatagt tcggctgtat gtagggtaca gcacgatgaa tctgttagag gcgcaatagt
     5821 gacagatttg attatcaatt cctattttgt tctaaggata aaaccttagg ttgtgatcat
     5881 ccgcacaatc ccttagtaac gccagcggtc ataacgctga tatttaggca cttttggtgc
     5941 tttaatcgcc ttaataaccc acaccaccgc aatcgccagt agtaaccacg gcagcaactt
     6001 aatcatcaat gccagcatac cgccgaggaa cataatggcc gtcaccacaa ccagcgcggc
     6061 gataatgccc agcaacgaaa cgccggtgac catcagcatg acaaaaaagc caatcacaaa
     6121 aagtagttcc agcatgatgc tctcccaaat atgaaatctc ttgctggcat tacaagaatc
     6181 atgccaaaaa taatctattg atttaacagc aaaacgcccc gcgacggtgc gcagggcgtg
     6241 gtgaatttga ctactttttg gtgaaaagtt aacgcatatc cgccaccagt ttgagcgcgt
     6301 gttccagcac attaatgtct gcacccgctt tatgggcatt ttcacttaaa taacgccgcc
     6361 actgccgcgc gccaggaata ccctggaaca agcccagcat atgtcgggta atatggccga
     6421 gatacgtccc ctggctgagt tcatgctcaa tgtacggata catggcacgc actactgcca
     6481 ccggatcggc atcggtatcc gaggaaccaa agatctctcg gtctactgcc gccagaatac
     6541 ccggattctg atacgcctcg cgcccgacca tcacgccatc catatgttgc aaatgcgctt
     6601 tagcctcttc cagcgacttg ataccaccgt taatcgacat cgtcagatgc ggaaagtcac
     6661 gcttcagttg atacacacgc ggataatcga gcggcgggat ttcacggttt tctttcgggc
     6721 ttaaccccga aagccaggct ttacgtgcgt ggatgatgaa catctcacac tcgcctttac
     6781 cggaaacggt attgatgaaa tcgcagagaa attcatagct gtcctggtcg tcgataccaa
     6841 tacgcgtttt caccgtcacc ggaatcgaca ccacatcgcg catcgctttc acgcagtcgg
     6901 caaccagctg cgcattaccc atcagacacg caccaaacat gccgttctgc acccggtcag
     6961 acgggcagcc gacattcagg ttgatctcat catatccacg cgcttctacc agctttgcac
     7021 actgcgccag cgccgccgga tcgctaccgc cgagttgcaa cgctaccgga tgttcttctt
     7081 cactgtacgc cagataatca cctttaccgt gaataatcgc tcctgtggtc accatttcgg
     7141 tatacagcaa cgtattgcgg gaaagcagac gcaagaaata gcggcaatgt ctgtccgtcc
     7201 agtcgagcat aggtgcaacg ctaaaccgac cactccagtg aacgtcagtt ttttcaggca
     7261 ttgcgctggt ttggttgatt ttttgcattt cagaattacc gtgcattttc aaatgtagag
     7321 attattttat cgatatatca ttgagttatg ttattcagca tcactgttca ggaggctcaa
     7381 tagcggggta ctataccata acaacaggaa gcgcctgtct cattgcaaaa gaaaattgag
     7441 atcctctcaa ggcatgaagc tctcacgaag tgaagatata atcttattag atgttagcgt
     7501 tgtgaaaagc aatgataaac aattcagttt cgacgataaa taaaaaatca catataaacc
     7561 atgctgatat acctcgcggc gaatagtatt gatagataaa aaagaaccca atcattgttg
     7621 agttcttttg tataatgcct tccataccat cgaagaactt cacatattat ttctccgatt
     7681 taaccccgaa taaatcataa attaatttag aagtgtctgt aagtatttta atctcttcct
     7741 ttgaggttag gtcaaacgac ttagcgaagc taattaattg cggtgcagca tctcgcattt
     7801 tgcttaaaat atcaggatcg agcgttcctt cattcaccag aagtgacatc ttctccagat
     7861 agtcatcaaa attcatttct cccccatctg ccagacgctt catctctccc agatacttct
     7921 tcatatcacg ttgagataat tcttcaaact gagctgtcag gtagttatta ttatattcat
     7981 taatattcac tcttcctgct aaatctgcgt a
//
LOCUS       DAJVTL010000168         7986 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.170, whole genome shotgun sequence.
ACCESSION   DAJVTL010000168 DAJVTL010000000
VERSION     DAJVTL010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7986
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.170"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1678
                     /locus_tag="OQQ26_003836"
     CDS             <1..1678
                     /locus_tag="OQQ26_003836"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HCS1859136.1"
                     /translation="RECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQITLQ
                     PAATSNGLLLLERAETDAPAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEI
                     GTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQ
                     DWTNLDANMGSEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSG
                     DELKKTLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGF
                     DDLTMSLAFLPDIKTESTTASGLPVFYKNKTDTHAKVIEGFTPRDYLTHWLSQWVRDY
                     GIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVM
                     QSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRL
                     FREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTDSDPLQGTRSDMNWQDVSGKSAAS
                     VAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ"
     gene            1856..3109
                     /gene="avtA"
                     /locus_tag="OQQ26_003837"
     CDS             1856..3109
                     /gene="avtA"
                     /locus_tag="OQQ26_003837"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HCS1859137.1"
                     /translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
                     EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLPAGMLREKLGWDIEPQNIAL
                     TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
                     ISLAPGGIGPAMMCEMIKRNDLLSLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHK
                     PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYV
                     PEPEKIEAGVKILAEEIERAWAESH"
     gene            complement(3260..3733)
                     /locus_tag="OQQ26_003838"
     CDS             complement(3260..3733)
                     /locus_tag="OQQ26_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HCS1859138.1"
                     /translation="MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRI
                     RVIKDHSWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFG
                     AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
     gene            complement(3835..4683)
                     /gene="yiaJ"
                     /locus_tag="OQQ26_003839"
     CDS             complement(3835..4683)
                     /gene="yiaJ"
                     /locus_tag="OQQ26_003839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HCS1859139.1"
                     /translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
                     LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
                     IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
                     KIYMAFGHPDYVKSYWESHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENEL
                     GVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
                     DLDAIT"
     gene            4884..5882
                     /gene="yiaK"
                     /locus_tag="OQQ26_003840"
     CDS             4884..5882
                     /gene="yiaK"
                     /locus_tag="OQQ26_003840"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HCS1859140.1"
                     /translation="MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
                     LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGVSQIFIAIEVDKLIDGPT
                     RDAKLQRIMDYVTTAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL"
     gene            5894..6361
                     /locus_tag="OQQ26_003841"
     CDS             5894..6361
                     /locus_tag="OQQ26_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HCS1859141.1"
                     /translation="MIFGHIAQPNPCRLPAAIEKALDFLRATDFNALEPGVAEIDGKN
                     IYAQIIDLTTREAVENRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLAQRDI
                     IFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCIMQTASEIRKIVVKVALTALN"
     gene            6479..6952
                     /gene="yiaM"
                     /locus_tag="OQQ26_003842"
     CDS             6479..6952
                     /gene="yiaM"
                     /locus_tag="OQQ26_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HCS1859142.1"
                     /translation="MKKILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYL
                     FVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLK
                     TIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA"
     gene            6955..>7986
                     /locus_tag="OQQ26_003843"
     CDS             6955..>7986
                     /locus_tag="OQQ26_003843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HCS1859143.1"
                     /translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPHQQKATMQEIWHSFVSGIW
                     ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTS
                     VVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTP
                     TVLILTPVLM"
BASE COUNT         1924 a         2047 c         2032 g         1983 t
ORIGIN      
        1 ccgtgaatgc ccgaaatggg atggattacc gctcacagtg gatgtcagcg ccactttccc
       61 ggaaggagcc gccgtacggg attattacag ccagcaaatt gcgatagtga agaacggtca
      121 aataacgtta caacccgctg ccaccagcaa cggtttactc ctgctggaac gggcagaaac
      181 tgacgcccct gcccctttcg actggcataa cgccacggtt tactttgtgc tgacagatcg
      241 tttcgaaaac ggcgatccca gtaatgacca gagttacgga cgtcataaag acggtatggc
      301 agaaataggc acttttcacg gcggcgattt acgcggcctg accaacaaac tggattacct
      361 ccagcagctg ggcgtcaatg ctttatggat aagcgcccca tttgagcaaa ttcacggctg
      421 ggtcggcggc ggtacaaaag gtgatttccc gcattatgcc taccacggtt attacacaca
      481 ggactggacg aatcttgatg ccaatatggg cagcgaagcc gatctacgga cgctggttga
      541 tagcgcgcat cagcgcggta ttcgtattct ctttgatgtc gtgatgaacc acactggcta
      601 tgccacgctg gcggatatgc aggagtatca gtttggcgcg ttatatcttt ctggtgacga
      661 gctgaaaaaa acgctgggtg aacgctggag tgactggaaa cctgccgccg ggcaaacctg
      721 gcatagcttt aacgattaca ttaatttcag cgacaaaaca ggctgggata aatggtgggg
      781 aaaaaactgg atcagaacgg atatcggcga ttacgacaat cctggatttg acgatctcac
      841 tatgtcgctg gcctttttgc cggatatcaa aaccgaatca actaccgctt ctggtctgcc
      901 ggtgttctat aaaaacaaaa cggatactca cgctaaagtc atcgaaggct ttacacctcg
      961 cgattactta acccactggt taagtcagtg ggtccgcgac tatgggattg atggttttcg
     1021 ggtcgatacc gccaaacatg ttgagttgcc cgcctggcag caactgaaaa ccgaagccag
     1081 cgccgcgctt cgcgaatgga aaaaagctaa ccccgacaaa gcattagatg acaaaccttt
     1141 ctggatgacc ggtgaagcct ggggccacgg cgtgatgcaa agtgactact atcgccacgg
     1201 cttcgatgcg atgatcaatt tcgattatca ggagcaggcg gcgaaagcag tcgactgtct
     1261 ggcgcagatg gatacgacct ggcagcaaat ggcggagaaa ttgcagggtt tcaacgtgtt
     1321 gagctacctc tcgtcgcatg atacccgcct gttccgtgaa gggggcgaca aagcagcaga
     1381 gttattacta ttagcgccag gcgcggtaca aatcttttat ggtgatgaat cctcgcgtcc
     1441 gttcggtcct acagattctg atccgctgca aggtacacgt tcggatatga actggcagga
     1501 tgttagcggt aaatctgccg ccagcgtcgc gcactggcag aaaatcagcc agttccgcgc
     1561 ccgccatccc gcaattggcg cgggcaaaca aacaacactt ttgctgaagc agggctacgg
     1621 ctttgttcgt gagcatggcg acgataaagt gctggtcgtc tgggcagggc aacagtaact
     1681 tctccggctt cccgttcgtc agtacctcgg gaagccgcca accaggataa aatgtcagcc
     1741 ctaatcagcg ttgcaggata aagcaccgct cactcttcaa cagaccgatt tgcaccccag
     1801 caaatgtagc gttattgtta ccttccttgc tacagagttc gacagatatc ccgctatgac
     1861 attctccctt tttggtgaca aatttacccg ccactccggc attacgctgc tgatggaaga
     1921 tctgaacgac ggtttacgca cgcctggcgc gattatgctc ggcggcggta atccggcgca
     1981 gatcccggaa atgcaggact acttccagac gctactgacc gacatgctgg aaagtggcaa
     2041 agcgactgat gcactgtgta actatgacgg tccacagggg aaaacggagc tactcacact
     2101 gcctgccgga atgctgcgcg agaagttggg ttgggatatc gaaccacaga atattgcact
     2161 aacaaacggc agccagagcg cgtttttcta cttatttaac ctgtttgccg gacgccgtgc
     2221 cgatggtcgg gtcaaaaaag tgctgttccc gctggcaccg gaatacattg gctacgctga
     2281 cgccggactg gaagaagatc tgtttgtctc tgcgcgtccg aatattgaac tgctgccgga
     2341 aggccagttt aaataccacg tcgattttga gcatctgcat attggcgaag aaaccgggat
     2401 gatttgcgtc tcccggccga cgaatccaac aggcaatgtg attactgacg aagagttgct
     2461 gaagcttgac gcgctggcga atcaacacgg cattccgctg gtgattgata acgcttatgg
     2521 cgtcccgttc ccgggtatca tcttcagtga agcacgcccg ctatggaatc cgaatatcgt
     2581 gctgtgcatg agtctttcca agctggggct gcctggctcc cgctgcggca ttatcatcgc
     2641 caatgaaaaa atcatcactg ccatcaccaa tatgaacggc attatcagcc tggcacctgg
     2701 cggtattggt ccggcgatga tgtgtgaaat gattaagcgt aacgatctgc tgagcctgtc
     2761 tgaaacagtc atcaaaccgt tttactacca gcgtgttcag gaaactatcg ccatcattcg
     2821 ccgctattta ccggaaaatc gctgcctgat tcataaaccg gaaggagcca ttttcctctg
     2881 gctatggttt aaggatttgc ccattacgac cgagcagctc tatcagcgcc tgaaagcacg
     2941 cggcgtgctg atggtgccag ggcacaactt cttcccggga ctggataaac cgtggccgca
     3001 tacgcatcaa tgtatgcgca tgaactacgt accagagccg gagaaaattg aggcgggggt
     3061 gaagattctg gcggaagaga tagaaagagc ctgggctgaa agtcactaaa aattgcctga
     3121 tgcgctacgc ttatcaggcc tacatgattt ctgcaatata ttgaatttgg aagaatttgt
     3181 aggccggata aggcgtttac gccgcatctg gcataaacaa agcgcactat tccggcgttg
     3241 agaaacgccg gaaaacgttt caaacaggct gctgccgtag ccgatgccgc tgcactttct
     3301 cgacatccat gcactgcaac gcctttgtcg ggcaggcttc aacacaggcc ggccccgtct
     3361 cccgatgcca gcacagatcg cacttaatcg ccctcgcctt tttgcgcgaa gaaacgacct
     3421 ccatcgcacc aaacgggcaa gccagcatac agcttttaca gccaatgcaa cgtgtttgtt
     3481 caacgaaaat atgcccatgt tcgcggctta tcgcgtcaac agggcagaca ttcgcgcacg
     3541 gtgcatcttc acactgatga caggctactg ccgtggtcca actgtggtct ttaatgacac
     3601 gaatacggga aataaactcg tctggtgaca acgcagcgca atcctgattc tcctgatgcg
     3661 acactgcgca agccacttca caggtacggc aaccgataca tttcgtcgca tccgcaataa
     3721 taaaccggtt catgatcact cctttgcact aaaacagcag agtgccagag agcgcgtccc
     3781 tactgctttg atccaacgaa ggaaatgtta aagttttggc acttgtccaa agcgttatgt
     3841 gatcgcgtcc aggtcatccc tgacagtaaa tcccagttca ttagaaatag cctgcgcggt
     3901 ttcacgcagt ggtttcagga gatttttctc ccccacctgt ttcagacgtg atgtcgaaag
     3961 cgaaatcgac acggcgtacg gcacccgccc atgaatatca aacaccggaa cagcaataca
     4021 ggagacgccg agttcgtttt cttctctgtc catcgccgct ccgctttcac gaatgtgcgc
     4081 cagttcgtcg aacatcgcgg gcagctcggt aatggtattg cgggttaacg gctggatctc
     4141 atgctgatgg ctttcccagt atgacttcac gtagtccggg tgaccaaacg ccatgtagat
     4201 cttgcccatt gcggaacagt agagcggcat atgctggcca atataggcac gggttcgcag
     4261 catcccggtt gtgggctcca gcttataaat caaaatagcg tgatcgtctt cgcggctgga
     4321 gaagttaatg gtttcaccag tggcgatgtt cagtgcctca agatgcggag cggcgatatg
     4381 aatgatattc agcgaagaca gcgccttctg cccgacggca ataaatttgg tagtcaggcg
     4441 gtaactccct gcggcgggcg cggtggtcac atagccgcag gactgtaatc cctgcaataa
     4501 gcgatggacg gtactcttat ttaaaccagc cagctccgaa agatgcgcca acggacaacc
     4561 gtttggatag ttgctcaaaa tctcaatcag catcaacccg cgaaacagac tctggcttcc
     4621 ggctggacgc tctttttcct gcgccatctc gttctctttt tttcccatca cttctttccc
     4681 cattttgtcg cgtcctgatg gtagcgcaaa gtgtgccgta gttcacgatc tcgacagata
     4741 atttataacc acttgatttt taagtttttt gaaattcatc aaccagattg ctttgttaaa
     4801 aagtgatcga tatatttgaa atgaagtttc gcatattgaa attttaagcc aaaaaagcga
     4861 tcaaaaaaac aaggaagcct gggatgaaag tgacatttga gcagttaaaa gcagccttta
     4921 atcgggtctt aatttcacgc ggcgttgaca gcgaaacggc tgacgcctgt gcagagatgt
     4981 tcgcccgcac caccgaatcc ggcgtttatt ctcacggcgt taatcgtttc cctcgtttca
     5041 ttcaacaact ggaaaacggc gatatcattc ctgatgccca acccaaacgt ataaccagcc
     5101 tcggcgcaat tgaacagtgg gatgcccagc gttcgatcgg caacctgacg gcgaaaaaga
     5161 tgatggatcg cgccattgaa ctggctgccg atcacggtat tggtctggtg gcacttcgta
     5221 atgccaacca ctggatgcgc ggcggcagct acggctggca ggcggcggaa aaaggctata
     5281 ttggcatttg ctggaccaac tccatcgccg taatgccgcc gtggggcgca aaagagtgtc
     5341 gcatcggcac taacccgctg atcgtcgcca ttccttccac gccgatcacc atggtcgata
     5401 tgtcgatgtc gatgttctct tacggcatgt tagaagttaa ccgcctggcg ggccgtcagc
     5461 tcccggtcga tggtggcttt gatgatgagg gcaatttgac caaagaacct ggcgttatcg
     5521 agaagaatcg ccgcattttg ccgatgggct actggaaagg ttctggcatg tcgattgtgc
     5581 tggatatgat cgctactctc ctttccgacg gcgcatcggt tgccgaagtc acccaggaca
     5641 acagcgacga atacggcgtt tcgcaaatct ttatcgccat cgaagtggat aaattgatcg
     5701 acggccccac ccgcgatgcc aagctgcaac gcatcatgga ttacgttact accgctgaac
     5761 gcgctgacga aaaccaggcc atccgcttac ccggccatga atttactacc ctgctggccg
     5821 aaaaccgccg taacggtatt accgttgatg acagcgtgtg ggccaaaatc caggcgttat
     5881 aaggagataa gtcatgattt ttggacatat cgcgcagccc aatccgtgcc gtttgcccgc
     5941 cgccattgaa aaggcgctcg attttctgcg cgctaccgat ttcaacgccc tggagccggg
     6001 cgttgccgaa atcgacggca aaaatattta tgcgcaaatt atcgatttaa ccacacgcga
     6061 agcggtggaa aaccgtccgg aagtgcatcg tcgatatatc gatattcagt ttctggcgtg
     6121 gggtgaagag aaaatcggca ttgctattga tacgggaaat aataaagtca gcgaatcact
     6181 attagcgcag cgcgatatta ttttttatca cgacagtgaa catgaatcat ttatagaaat
     6241 gataccgggc agctacgcaa ttttctttcc gcaggatgtt caccgaccag gttgtattat
     6301 gcaaacagcc tctgagatac gaaaaattgt ggttaaagtc gcattaacgg cgctgaatta
     6361 atcgaataat cgtctacgcc agaacgcctg ggtaatgtta ttgctctaac tatattaata
     6421 attcaggttg ctgcacatgc aacttgaatt atgacagaca tagcctcaag gaatagctat
     6481 gaaaaaaata ctcgaagcaa tactggcgat taatctcgcc gtactttcct gtattgtatt
     6541 tataaacatt attttaagat atggttttca gacaagcatt ttatctgttg atgaattgtc
     6601 acgttattta tttgtctggt taacgtttat tggcgcgatt gtagctttta tggataacgc
     6661 ccacgttcag gtcacctttc tggtggagaa actctccccc gcatggcagc gacgagtcgc
     6721 tctggttacc cattccttaa tcttatttat ttgtggcgca ctggcctggg gcgcaacgct
     6781 aaaaacaatt caggactgga gcgattattc accgatcctc ggtttgccca tcggcctgat
     6841 gtatgccgct tgtctgccca ccagcctcgt tatcgcattc tttgaactgc gtcatttata
     6901 tcaactcatc acgcgtagca attctctaac gtcgccaccg caaggagctt aatcatggct
     6961 gtgctgattt ttctgggctg tctgttgggt ggtattgcta tcggtttgcc tattgcctgg
     7021 gcactgttgt tgtgcggggc ggcgttaatg ttctggctgg acatgtttga tgtccagatc
     7081 atggcacaaa ccctggtgaa cggagccgac agcttttccc tgctggcgat tccgttcttt
     7141 gtgctggcgg gtgaaatcat gaatgcgggc ggcttgtcaa aacgcattgt tgacctgccg
     7201 atgaaactgg tggggcataa accaggcggg ctgggctacg tcggcgtgct ggcggctatg
     7261 attatggcga gcctttctgg ttctgccgtt gcggataccg ccgccgttgc cgctctactt
     7321 gtgccgatga tgcgcagcgc caactaccct gtcaaccggg cggcggggct gattgcctct
     7381 ggcggcatta tcgcgccaat tattcctcct tccattccgt ttattatctt cggcgtttcc
     7441 agcggattat ccatcagtaa gctgtttatg gcgggtattg cccctggcat gatgatgggc
     7501 gcaacgctga tgcttacctg gtggtggcag gccagtcgtc ttaacttacc ccaccagcaa
     7561 aaagcgacga tgcaggaaat ctggcactct tttgtctccg gtatctgggc gctgtttctt
     7621 ccggtcatca ttattggcgg gtttcgctcc ggtctgttta cccctaccga agccggggcc
     7681 gttgctgctt tctatgcgct gtttgtcgcc acagttattt accgtgaaat gaccttcgcc
     7741 acactttggc atgtactcat tggcgcggcg aaaaccacct cagtggttat gtttctggtg
     7801 gcctcggcac aagtttccgc ctggctgatt accattgctg aactgccgat gatggtttct
     7861 gatttactgc aaccgttggt cgattcaccg cgtctgctgt ttatcgtcat tatggtggca
     7921 atcctgattg tcggcatggt catggattta acgccgacgg tattaattct taccccggta
     7981 ttaatg
//
LOCUS       DAJVTL010000169         7857 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.171, whole genome shotgun sequence.
ACCESSION   DAJVTL010000169 DAJVTL010000000
VERSION     DAJVTL010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7857
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.171"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..86)
                     /locus_tag="OQQ26_003844"
                     /pseudo
     CDS             complement(1..86)
                     /locus_tag="OQQ26_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            84..408
                     /locus_tag="OQQ26_003845"
                     /pseudo
     CDS             84..408
                     /locus_tag="OQQ26_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612087.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(438..3350)
                     /locus_tag="OQQ26_003846"
     CDS             complement(438..3350)
                     /locus_tag="OQQ26_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859144.1"
                     /translation="MFSKAFLRKISMFFARRKPAAMKICLYHTLNPDTIPGYKKFAQA
                     IATDNFVQADVRKIDTNLYRARLSIRDRLLFSLYRYHGETICLVLEYIRNHAYNTSRF
                     LRRNVVIDEGRLQQQPVPDPVDIATEALTYINPSHGRFHRLDKMLSFDDDQQALYEHP
                     LPLVIVGSAGSGKTALVLEKMKQAAGDILYLSLSSFLVEKARTLYDASGEGSEVQNID
                     FLSLTEFLETLRIPEGREVTFSAFSDWLPRNRAIAALGAAHTLYEEFRGVIGAVASGN
                     GPLSREAYLSLGIRQSLYGMEDRPTVYVLFERYIAWLKQSHQYDSNLLSHQYLSLATP
                     RYDVIFVDEVQDMTPVQLQLVLKTLRHPGQFLLCGDANQIVHPSFFSWSSLKSLFFRQ
                     QQGNDTTVNILQANYRNGHHVTALANRLLRLKQVRFSAIDRESHHFVRSCGQAEGTIR
                     LLDDREETKQELNAKTSLSNRVAVIVMHPEQKAQARCWFSTPLVFSVQEVKGLEYETV
                     ILYNIVSAARQAFDDICEGLTPADLEGEARYSRPRDRQDRSAEIYKFFTNALYVALTR
                     ATHNVYLVEQQVEHPLWSLLALTHQEEPLNLQEEISSRDEWQKTAHLLEKQGKQEQAD
                     TIRSRILQTSEMPWQIITAEDARQWKQHILAGTADKTIQLQALEYSLIYSLFPLYNAL
                     YREDFKPTRQPRTKTLQLLELKYFRPYSMNNPVAVLRDIERYGVDHRSPFNLTPLMSA
                     ARAGNIALVQLLLERGADPLLTGNDGLAAYHQVLSAAVSTPRYAQQKSAQLYTLLKPE
                     SLSLQVEGRLIKLDNRQMAMFLVILMQALFHTHLGSALFFSEAFSAARLAECVVHLPE
                     ALLPERRKRRSYISSQLSQHEVNSKNPYGKKLFLRLNHGQYILNPELKIRQGDVWRAV
                     YELQSPEDLGHDLQTYLQDMSPELVDMLGGKKGFYERSEKYVGYWVGGIRRAAQKA"
     gene            3353..3469
                     /locus_tag="OQQ26_003847"
     CDS             3353..3469
                     /locus_tag="OQQ26_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004996477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HCS1859145.1"
                     /translation="MPGIPPEIRWNNQKNALQLWNKEGGVVRREGDPLEMAQ"
     gene            3833..4675
                     /locus_tag="OQQ26_003848"
     CDS             3833..4675
                     /locus_tag="OQQ26_003848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HCS1859146.1"
                     /translation="MLNEGGILFKANHVPVLMYHHVSHCPGLVTLSPVTFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLKEFNLKAHIFLIT
                     GFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSKHLCWPEGYYNKDYIQVAEELG
                     FYYLYTTERRMNAPAKGTTRIGRISTKERESCAWLKRRLFYYTTPFFSSLLAFHKGPR
                     LPDD"
     gene            4678..5766
                     /gene="capU"
                     /locus_tag="OQQ26_003849"
     CDS             4678..5766
                     /gene="capU"
                     /locus_tag="OQQ26_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HCS1859147.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKLGIDITFALFRNSLHIPTAWRLLGIVHGFQPNAIVCHSGHDSNIVGLVRLFTW
                     KHPFRIIRQKTYLTRKTKVFSINHFCDEVIVPGTSMKTHLEQEGCRTRVTVVPPGFDF
                     QKLYVDSRNSLPPNVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGM
                     VLAEASAFSVPVLASQIGGIPDVIQNNQTGTLLPAGNKHAWMCALNDFFNDPGRFYQM
                     ARQAKLDIEERFDINKTALKILTLAKHK"
     gene            5771..6721
                     /gene="virK"
                     /locus_tag="OQQ26_003850"
     CDS             5771..6721
                     /gene="virK"
                     /locus_tag="OQQ26_003850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HCS1859148.1"
                     /translation="MFSVSNLSFIGFLKRIVFSSDSLPGKWEHRKFRFMYILRCAINP
                     VASIRYYYELRSLQCIEDILAIQPTLPARIHRPYLHKGGRAWSRGQYILEHYRFVQNL
                     PEKYSEFLFPQKSVSLVQFIGKDGEDFDIQCSPSGFDREGELMLSLFFNKIVIARLTF
                     SVILTQNGHTAFIGGLQGAPKNTGPDVIRCATRACYGLFPKRIIFEAFCALMKACNVS
                     ECLAVSEHSHVFRQLRYWYQKRKTFVAVYSDFWESVAGKTCGDWYKLPTQVVRKPLSN
                     IASKKRSEYRKRYALLDYIHETAIRSLDAYPVNSEHQDLN"
     gene            6786..7730
                     /gene="lpxM"
                     /locus_tag="OQQ26_003851"
                     /gene_synonym="msbB"
     CDS             6786..7730
                     /gene="lpxM"
                     /locus_tag="OQQ26_003851"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HCS1859149.1"
                     /translation="MKKYKSEFIPEFKKNYLSPVYWFTWFVLGMIAGISMFPPSFRDP
                     VLAKIGRWVGRLSRKARRRATINLSLCFPEKSDTEREIIVDNMFATALQSIVMMAELA
                     IRGPEKFQKRVFWKGLEILEEIRHNNRNVIFLVPHGWSVDIPAMLLAAQGEKMAAMFH
                     QQRNPVIDYVWNSVRRKFGGRLHSREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFA
                     DFFATYKATLPIIGRLMNISQAMIIPLFPVYDEKKHFLTIEVRPPMDACIASADNKMI
                     ARQMNKTVEILVGSHPEQYIWVLKLLKTRKSNEADPYP"
BASE COUNT         2115 a         1755 c         1859 g         2128 t
ORIGIN      
        1 tcctgctccg acatacctgc aggcaaaggc catgaaagcc ctgatttccg gaagcgagcg
       61 aacagtccac aaactgttga acgtggtgtc agcggcggac agggataagc cctcgtcagc
      121 agttccgtca gcactgcgac agcgttcttt acccggtcaa aacagcgttg cggtgcacca
      181 cgcctgacgg atgaactgcg tgctcagggt taccacttta acgtaaaaac cgtggcggca
      241 agcctgcgcc gtcaggggct gagggcaaag gcctcccgga agttcagccc ggtcagttac
      301 cgcgcacatg gcctgcccgt gtcagaaaat ctgctggagc aggattttta cgccagtggt
      361 ccgaaccaga agtgggcggg agacatcacg tacttacgta cagatgaagt tcggttacat
      421 cctgtcagca cggaacctca cgctttttga gcggcacgac ggatcccccc cacccagtat
      481 ccgacatact tttcactgcg ttcgtaaaaa cccttcttcc ctcccagcat atccactaat
      541 tccggtgaca tatcctgcag ataagtctgc aaatcatgcc ccagatcttc cggtgactgc
      601 aactcataaa ccgcgcgcca cacatcaccc tgccttattt taagctccgg gttaagaata
      661 tactgtccgt ggttcagcct cagaaaaagc ttttttccat aaggattttt gctgttaact
      721 tcatgttgag agagctggct gctgatataa ctccttcgtt tgcggcgttc cggcagcaac
      781 gcttcaggaa gatgaaccac acactctgcc agtcgtgccg cactgaaggc ttccgaaaaa
      841 aacagagcac ttcccagatg cgtgtggaac agcgcctgca tcaggatcac cagaaacatt
      901 gccatctgcc ggttgtccag tttgatgagg cgtccttcca cctgcagtga cagactttca
      961 ggtttcagca gggtatacaa ctgcgcactt ttctgttgcg cataacgggg cgtactgacc
     1021 gccgctgaca gaacttgatg ataagccgcc aacccgtcat taccggtcag caagggatct
     1081 gcaccacgct ccagcagtaa ctgaaccagt gcaatattac ctgcccgggc tgctgacatc
     1141 agcggagtaa gattaaacgg cgaacggtga tcaacaccat aacgttcaat atcccgcaac
     1201 acggcaaccg ggttattcat tgagtatggc cggaaatact tcagctccag taactgcaga
     1261 gtcttcgttc tgggctgcct tgtgggctta aaatcttccc ggtacagtgc attatacagc
     1321 gggaacaggg aataaatcag actgtactcc agcgcctgca gttgtatggt tttatcggct
     1381 gtacctgcga ggatatgctg tttccactgt cgtgcatcct ctgcggtgat aatctgccat
     1441 ggcatctcag atgtctgcag gatccggcta cggatggtgt ctgcctgctc ctgcttcccc
     1501 tgtttttcaa gcagatgtgc ggttttctgc cactcatcac ggctggaaat ctcttcctgc
     1561 agattcagag gctcttcctg atgcgtgagc gcaagcagac tccacagagg atgctccacc
     1621 tgctgttcaa caagatacac attgtgtgta gcacgggtga gcgcaacata cagcgcgttg
     1681 gtaaaaaatt tatagatttc cgctgaacga tcctgcctgt cccgcggacg ggaataacgg
     1741 gcctcgccct caagatcagc cggtgtaaga ccctcgcaaa tatcatcaaa tgcctgccgg
     1801 gcagcgctta ctatattgta aaggatcacc gtttcgtatt ccagcccctt aacctcctga
     1861 accgaaaaga ccagcggcgt actgaaccag catcgcgcct gtgctttctg ttccggatgc
     1921 atcacaatga ccgctacacg attcgaaagt gaggttttgg cattcagttc ctgctttgtc
     1981 tcttccctgt cgtccagcaa ccggatggtc ccttctgcct gaccgcagct tctgacaaaa
     2041 tggtgacttt cccgatcaat agcactaaag cggacctgtt tgagtctcag caaccggtta
     2101 gccagtgcag tgacgtggtg cccgttacgg taattcgcct gcaggatatt aacggttgtg
     2161 tcgtttccct gttgctgccg gaaaaagaga cttttgagcg aactccatga gaaaaagctc
     2221 ggatgaacta tctgattggc atcaccacag agtaaaaact gaccgggatg acgtagcgtt
     2281 ttcagtacca gttgcagttg aacaggcgtc atatcctgaa cttcatcaac aaaaatgaca
     2341 tcataacggg gagttgccaa cgaaagatac tgatgactga gcagattact gtcatactga
     2401 tgcgactgtt tcagccatgc gatataacgt tcaaacagga catagaccgt cgggcggtcc
     2461 tccatgccat agagcgactg ccgtatcccc agtgacagat acgcctcccg ggacagcggc
     2521 ccattcccgg aggcaaccgc accgatcacg cccctgaact cctcatacag ggtatgggca
     2581 gcccccagtg cggcgatagc cctgttgcgg ggcagccagt cgctgaacgc actgaaagtc
     2641 acctccctgc cttccggaat gcgcagagtt tccagaaatt ccgtcagcga aagaaagtca
     2701 atattctgta cctcactccc ttcccctgaa gcgtcataga gagtacgcgc tttttccacc
     2761 agaaatgagg aaaggctgag atacagtata tcaccagcag cctgcttcat tttttccagt
     2821 accagcgccg tcttaccact tcccgccgag ccaacaatca ccagcggtag cgggtgttcg
     2881 tacagtgcct gctgatcatc atcaaaggac agcattttat ctaggcggtg gaaacgccca
     2941 tgagacggat tgatatacgt cagcgcttca gtcgcgatat caacaggatc cggcactggt
     3001 tgttgttgta agcgcccttc atcaatcacc acgtttctgc gaagaaaacg tgaagtgtta
     3061 taggcatgat tgcgaatata ttccagaaca aggcagatag tttcaccgtg gtagcgatac
     3121 agcgaaaaca gtaatcggtc ccggatactg agccgggcgc ggtaaagatt ggtgtcaatt
     3181 ttacgaacat cagcctgaac aaagttatcg gtggcaatag cctgtgcaaa ttttttataa
     3241 cccgggatcg tgtcaggatt cagagtatga taaagacaga ttttcatggc tgccggtttc
     3301 cgtcgtgcaa aaaacatgct gattttacga aggaatgcct tactgaacaa ccttgcccgg
     3361 aatacccccc gaaatcagat ggaacaatca gaaaaatgct ctgcagttat ggaataaaga
     3421 aggtggggtg gtacgccggg agggcgatcc gctggaaatg gcgcagtagc tgcaggcctg
     3481 tcatgatgcc ggaatagaag ttcgtgtaca ggttaatgaa agcgtcaccc cgtaaataaa
     3541 ctctgcgctg aaattccttt ttttcattgg agcacctgtg ttgttctgag gtgaacatat
     3601 cacctctgtt caggtagcca aattcagtgt gccacctcaa ggttcttagt gagtcgtttt
     3661 taaaagatat gataatatat cattgtttat gaattgttga tgtttaattt agtaaattat
     3721 atcaaatatg ccatgggttt gctatgttat tcatccagta tctggaaata aaatgcacca
     3781 gctttattgg gttttccttt tgtctctgct tactaggtgc cagaaatttt aaatgttaaa
     3841 cgaagggggc attttgttca aagccaatca tgttccggta ttaatgtatc atcatgtcag
     3901 tcattgcccc ggactggtta cactttctcc cgtgacattc cggaagcaaa tgaaatggtt
     3961 ggctgaaaac aactggaaaa cactgtcatc agatgaactg gagttttttt atcggggcgg
     4021 aaaactcccc cggaaaagcg ttatgttgac atttgatgat ggataccttg acaactggtt
     4081 tcaggtatat cctttattaa aagagtttaa tctcaaagca catatttttt taattaccgg
     4141 ttttattggg aatggtccgg ttcgtcactc tcctggaaag gaatattctc atcgcgattg
     4201 cgaacatcaa atagcgacag ggaatgctga taatgttatg cttcgctggt ctgaagtaaa
     4261 cgaaatgttg caatctggtc tggtcgaatt tcatgttcat acgcatactc atacacgctg
     4321 ggataaaaag ttcagttcac gagaagaaca gtgtaaacat cttcggcagg atttgttgag
     4381 cgggagagaa tatttgaaag aaatgacagg aaaatgcagt aaacatttgt gttggccgga
     4441 aggttattat aacaaggatt atattcaggt cgctgaagaa cttggattct attatttata
     4501 tacaacagaa agaagaatga atgctcctgc taaaggaact acacggatag gaagaataag
     4561 caccaaagaa cgggaaagtt gcgcatggct gaaaagacga cttttttatt atacaacacc
     4621 gtttttttca tcgttgctgg cctttcataa ggggccaaga ttaccggatg attaataatg
     4681 aatatactat ttacggaatc atcaccgaat ataggtggtc aggaattaca ggctgttgct
     4741 caaatgaagg ccctgaagaa aatggggcat tcagttctgc ttgtctgcag ggaaaacagc
     4801 aaaattgctt ttgaagccag taaattggga attgatatca cattcgcgtt atttcgaaac
     4861 agtcttcaca tccctactgc atggagatta ctcggaatag ttcatggttt tcagcccaat
     4921 gcaatcgttt gtcacagtgg gcatgatagc aatattgttg gtttagtacg gttattcact
     4981 tggaaacatc cattcagaat tatcaggcaa aagacatatt tgacacgaaa aacaaaagtt
     5041 ttttcaataa atcatttttg cgatgaggtg attgttcccg gaacaagtat gaagacacat
     5101 ctggagcagg aaggatgtcg aacccgggtt actgttgtgc ctccaggctt tgatttccag
     5161 aaattatacg ttgattcccg aaacagtttg cctccaaatg ttctttcttg gctggcgtcc
     5221 cgaaggggat gccctgttat tgctcaggta ggaatgttgc gcccggaaaa agggcacgaa
     5281 tttatgttga atttactgtt ccatttaaaa atgaatggac gacagttctg ttggttgatt
     5341 gtggggtctg gttcgcctga actgcgggag catttacagt atcagattga cagtatgggc
     5401 atgcatgatg atgtttttat tgctgacaat gtttttcctg ccgcccccgt atatcgggtt
     5461 gccagtctgg tggttctgcc ttcagaaaac gaatcgtttg gtatggtact ggcagaagca
     5521 tcggcatttt ctgtgcctgt actggccagt cagattggtg gaatccctga tgttattcag
     5581 aacaaccaga ccgggacatt gttaccagca ggtaataagc acgcatggat gtgcgccctg
     5641 aatgattttt ttaatgaccc tgggcgtttt tatcagatgg ctcgccaggc aaaactggat
     5701 atagaagagc ggtttgatat taataaaact gcgttaaaaa tactcacatt agcgaagcac
     5761 aagtaacaat atgttttctg taagtaactt atcatttatc ggtttcctta aaaggattgt
     5821 tttttcctca gattcactcc cggggaagtg ggaacacaga aaattccggt tcatgtacat
     5881 tttgcgatgt gctataaatc cggttgccag tattcgatat tattacgaac tgcgttcctt
     5941 gcagtgcatt gaggatattc tggcaataca acccacgttg ccagcaagaa ttcatcgacc
     6001 ttatttgcat aaaggggggc gagcctggtc ccgggggcaa tatattcttg agcattatcg
     6061 ctttgtgcaa aatttgccag aaaaatattc tgaatttttg tttccacaaa aatcggtatc
     6121 attagtccaa ttcatcggga aagatggaga ggattttgat atccagtgtt ctcccagtgg
     6181 ttttgaccgg gaaggagagt tgatgttgtc attgtttttc aataaaatag tgattgcccg
     6241 gttaacattt tcagtcattc tgactcaaaa tggacacacc gcttttattg gcggattaca
     6301 gggagccccc aaaaataccg gacctgatgt tattcggtgc gcaacccggg cctgttatgg
     6361 gcttttccca aaacggatta tttttgaagc attttgtgcg ttgatgaaag cttgtaatgt
     6421 ctctgagtgt ctggcagtca gtgagcacag tcatgttttc cggcaattga gatactggta
     6481 tcagaaacgc aaaacctttg ttgctgtcta cagtgatttc tgggagtctg tagcagggaa
     6541 aacctgtggt gactggtaca aattaccaac acaggtggtt cgaaagccgc taagcaatat
     6601 agctagtaaa aaacgctctg agtatcgaaa acgatacgct ttgttggatt atatccatga
     6661 aactgctatc cgctctttgg atgcatatcc tgtaaactca gaacatcagg acttaaatta
     6721 aggtttgatg tattctctga ataaaatatt aatgatgatt ttggtagggg cattcgcact
     6781 aaataatgaa aaaatacaaa tccgagttta ttcctgaatt taagaaaaat tatctttccc
     6841 ctgtttactg gtttacatgg ttcgttttgg gaatgattgc aggtatttca atgtttcccc
     6901 cttcattcag agatcctgtc ttggccaaaa tagggcgttg ggtgggcaga ttgagcagaa
     6961 aagctcgtcg cagggcgacg attaatttat cgctttgttt cccggaaaag agtgatacag
     7021 aacgggaaat aattgtcgac aatatgtttg ccacagcatt gcaatccata gtgatgatgg
     7081 cagaactggc aattcgtggt ccggaaaagt tccagaaacg agtgttctgg aaaggcctcg
     7141 aaattcttga ggaaatccgg cacaataaca gaaatgtgat ttttctggtt ccccatggct
     7201 ggagcgtgga tattcctgca atgttgctgg cagctcaggg ggaaaaaatg gccgccatgt
     7261 ttcatcagca acgaaatcca gtgattgatt atgtctggaa ttctgtacgg cgtaaattcg
     7321 gggggcgctt acattcccgg gaggatggga taaaaccatt tattcagtca gtacgccagg
     7381 gatactgggg gtattacctt ccagatcagg atcatggtcc tgaatacagt gaatttgctg
     7441 atttttttgc gacctataaa gcgacattac caattattgg acgtctgatg aacatcagtc
     7501 aggctatgat tataccgctt ttcccggttt atgatgaaaa aaaacatttc ctgactattg
     7561 aagttcggcc accaatggat gcatgcattg ccagcgcgga caataaaatg attgcccgac
     7621 aaatgaacaa aacagtggaa attttggtgg ggtcacatcc ggaacagtat atctgggttt
     7681 taaaattgtt aaaaacgcgc aaatcaaacg aagcggaccc gtacccttga aattataaag
     7741 tacaggtatt tccactagtt gtttcttaca ggttaccaat cgaaacacat cccccttccg
     7801 tgtgttgccc gtttggcacg gaggactgtg tagatgcagt tcgttaaatt taattta
//
LOCUS       DAJVTL010000170         7845 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.172, whole genome shotgun sequence.
ACCESSION   DAJVTL010000170 DAJVTL010000000
VERSION     DAJVTL010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7845
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.172"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..278)
                     /locus_tag="OQQ26_003852"
     CDS             complement(<1..278)
                     /locus_tag="OQQ26_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1859150.1"
                     /translation="MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELG
                     VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSL"
     gene            379..633
                     /locus_tag="OQQ26_003853"
     CDS             379..633
                     /locus_tag="OQQ26_003853"
                     /inference="COORDINATES: protein motif:HMM:NF012398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCS1859151.1"
                     /translation="MTITPATHAISINPATGEQLSVQPWAGADDIENALQLAAAGFRD
                     WRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGKPIN"
     gene            697..1763
                     /locus_tag="OQQ26_003854"
                     /pseudo
     CDS             697..1763
                     /locus_tag="OQQ26_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001382071.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
     gene            1827..2753
                     /gene="glsB"
                     /locus_tag="OQQ26_003855"
     CDS             1827..2753
                     /gene="glsB"
                     /locus_tag="OQQ26_003855"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HCS1859152.1"
                     /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
                     ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFYYCALKMSCVELARTFVFLANQGKA
                     IHIDESVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
     gene            2753..3112
                     /locus_tag="OQQ26_003856"
     CDS             2753..3112
                     /locus_tag="OQQ26_003856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HCS1859153.1"
                     /translation="MQPLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD
                     FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEQQQR
                     YIVAVIYHWLVIQMNQP"
     gene            3153..4292
                     /locus_tag="OQQ26_003857"
                     /pseudo
     CDS             3153..4292
                     /locus_tag="OQQ26_003857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310156.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
     gene            4519..5970
                     /gene="uxaB"
                     /locus_tag="OQQ26_003858"
     CDS             4519..5970
                     /gene="uxaB"
                     /locus_tag="OQQ26_003858"
                     /EC_number="1.1.1.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagaturonate reductase"
                     /protein_id="HCS1859154.1"
                     /translation="MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDL
                     NSGVVVVRPIETSFPPSLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEY
                     DEFLKLAHNPEMRFVFSNTTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGA
                     LDKGWIIIPCELIDYNGDALRELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTG
                     YPRDEVAKLEEELGYHDGFLDTAEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKP
                     YKERKVAILNGAHTALVPVAFQAGLDTVGEAMNDAEICAFVEKAIYEEIIPELDLPRD
                     ELESFASAVTGRFRNPYIKHQLLSIALNGMTKFRTRILPQLLAGQKAKGTLPARLTFA
                     LAALIAFYRGERNGETYPVQDDAHWLERYQQLWSQHRDRVIGTQELVAIVLAEKDHWE
                     QDLTQVPGLVEQVANDLDAILEKGMREAVRPLC"
     gene            6177..7091
                     /locus_tag="OQQ26_003859"
     CDS             6177..7091
                     /locus_tag="OQQ26_003859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416037.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bestrophin family protein"
                     /protein_id="HCS1859155.1"
                     /translation="MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPW
                     YTHLGIKFTLAPFSILGVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKT
                     TLPDSASVREFARLQIAFAHCLRMTLRKQPQAEVLAHYLKTEDLQPVLASNSPANRIL
                     LIMGEWLAVQHRNGQLSDILFISLNDRLNDISVVLAGCERIAYTPIPFAYTLILHRTV
                     YLFCIMLPFALVVDLHYMTPFISVLISYTFISLDCLAEELEDPFGTENNELPLDAICN
                     AIEIDLLQMNDEAEIPAKILPDRHYQLT"
     gene            complement(7095..>7845)
                     /gene="tam"
                     /locus_tag="OQQ26_003860"
     CDS             complement(7095..>7845)
                     /gene="tam"
                     /locus_tag="OQQ26_003860"
                     /EC_number="2.1.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="trans-aconitate 2-methyltransferase"
                     /protein_id="HCS1859156.1"
                     /translation="WNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTA
                     LLHQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPEQALDLIFANASLQW
                     LPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVH
                     AYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLTRY
                     HQMLEEQYPLQENGQILLAFPRLFIVARRTE"
BASE COUNT         1844 a         1864 c         2107 g         2030 t
ORIGIN      
        1 agagaaaata aaccttgcgg ctcatcgcca gcgacaacgc tccgcgcttc atccactaac
       61 gcgagaattt gttggctata gcgtaaaaag ttatgcccgg caggagagag acgtaaacgc
      121 tgattctcgc gaataaacag atctaccccc agttctgttt ccaactggcg tagacgggta
      181 gtgagattcg acggtacgcg atgcactttt gctgcagcct gggttatgct gccagcttcg
      241 gcaaccgcgt tgaacatctc cagttgggtc agatccataa cattctcgat tcgtgaataa
      301 gtggcttaat attattcatt ttaaagcaag agtaaatctg cgtatcttca taccatgact
      361 cataaaggag ataccccgat gaccattact ccggcaactc atgcaatttc gataaatcct
      421 gccacgggtg aacaactttc tgtgcagccg tgggctggcg ctgacgatat cgaaaacgca
      481 cttcagctgg cggcagcagg ctttcgcgac tggcgcgaga caaatataga ttatcgtgct
      541 gaaaaactgc gtgatatcgg taaggctctg cgcgcccgta gcgaagaaat ggcgcaaatg
      601 atcacccgtg aaatgggcaa accaatcaac taggcgcgcg ctgaagtggc gaaatcggcg
      661 aatttgtgtg actggtatgc agaacatggt ccggcaatgc tgaaggcgga acctacgctg
      721 gtggaaaatc agcaggcggt tattgagtat cgaccgttgg ggacgattct ggcgattatg
      781 ccgtggaatt ttccgttatg gcaggtgatg cgtggcgctg ttcccatcat tcttgcaggt
      841 aacggttact taaacatgcg ccgaatgtga tgggctgtgc acagctcatt gcccaggtgt
      901 ttaaagatgc gggtatccca caaggcgtat atggctggct gaatgctgac aacgacggtg
      961 tcagtcagat gattaaagac tcgcgcattg ctgctgtcac ggtgaccgga agtgttcgtg
     1021 ctggagcggc tattggcgca caggctggag cggcactgaa aaaatgcgta ctggaactgg
     1081 gcggttcgga tccgtttatt gtgcttaacg atgccgatct ggaactggcg gtgaaagcgg
     1141 cggtagccgg acgttatcag aataccggac aggtatgtgc agcggcaaaa cgctttatta
     1201 tcgaagaggg aattgcttct gcatttaccg aacgttttgt ggcagctgcg gcagccttga
     1261 aaatgggcga tccccgtgat gaagagaacg ctctcggacc aatggctcgt tttgatttac
     1321 gtgatgagct gcatcatcag gtggagaaaa ccctggcgca gggtgcgcgt ttgttactgg
     1381 gcggggaaaa gatggctggg gcaggtaact actatccgcc aacggttctg gcgaatgtta
     1441 ccccagaaat gaccgcgttt cgggaagaaa tgtttggccc cgttgcggca atcaccgttg
     1501 cgaaagatgc agaacatgcg ctggaactgg ctaatgatag tgagttcggc ctttcagcga
     1561 ccatttttac caccgacgaa acacaggcca gacagatggc ggcacgtctg gaatgcggtg
     1621 gggcgtttat taatggttat tgtgccagcg acgcgcgagt ggcctttggt ggcgtgaaaa
     1681 agagtggctt tggtcgtgag ctttcccatt tcggcttaca cgaattctgt aatatccaga
     1741 cggtgtggaa agaccggatc tgacgcgaca tattcagctc tgatatactc gcaggtcttt
     1801 tcagacctgc ggtccaggag tagaaagtgg cagtcgccat ggataatgca attttagaaa
     1861 acatcttgcg gcaagtgcgg ccgctcattg gtcaaggtaa agtcgcggat tatattccgg
     1921 cgctggctac agtagacggt tcccgattgg gcattgctat ctgtaccgtt gacggacagc
     1981 tttttcaggc cggagacgca caagaacgtt tttccattca gtctatttcc aaagtgctga
     2041 gtctcgttgt cgccatgcgt cattactccg aagaggaaat ctggcaacgc gtcggcaaag
     2101 atccgtctgg atcaccgttc aattctttag tgcaactgga aatggagcag ggtattccgc
     2161 gtaatccgtt tattaatgcc ggtgcgctgg tggtctgcga tatgttgcaa gggcgattaa
     2221 gcgcaccacg gcaacgtatg ctggaagtcg tgcgcggctt aagcggtgtg tctgatattt
     2281 cctacgatac ggtggtagcg cgttccgaat ttgaacattc cgcgcgaaat gcggctatcg
     2341 cttggctgat gaagtcgttt ggcaatttcc atcatgacgt gacaaccgtt ctgcaaaact
     2401 acttttatta ctgcgctctg aaaatgagct gtgtagagct ggcccggacg tttgtctttc
     2461 tggctaatca ggggaaagct attcatattg atgaatctgt ggtgacgcca atgcaggcgc
     2521 ggcaaattaa cgcgctgatg gcgaccagtg gtatgtacca gaacgcgggg gagtttgcct
     2581 ggcgggtggg actaccggcg aaatctggcg ttggtggcgg tattgtggcg attgttccgc
     2641 atgaaatggc catcgcagtc tggagtccgg aactggatga tgcaggtaac tcgcttgcgg
     2701 gtatcgccgt ccttgaacaa ttgacgaaac agttagggcg ttcggtttat taatgcagcc
     2761 tctcgatcca ctcttcgcgc gtttatcccg ttcaaaattt cgatctcgct ttcgtttggg
     2821 catgaaagag cgtcagtatt gtctggagaa aggtgcgcca gtcatcgaac aacatgcggc
     2881 ggattttgtc gctaaacgtc ttgctcctgc attaccggct aacgacggta agcaaacccc
     2941 catgcgcggg catccggtgt ttatcgctca gcacgccact gcaacctgtt gtcgcggttg
     3001 tctggctaag tggcataaca ttccgcaggg tgtttcgtta agcgagcaac aacaacgtta
     3061 tatcgtggcg gtaatctatc actggctggt tatacagatg aatcagccat gataattgcg
     3121 gaaaacgata aaatagcatt cccagggtac ctatcaattt ctccaatatg atgtttattg
     3181 ttaccgtcgc cttactggtc gtgcgggata agcgtctggg gaaaaataag tatgagccag
     3241 taagtgcctt acggctattt aattactgtc tgattgccgc attattatgc gctattgtcg
     3301 gggcgattgg ttcggtcagt attgatagtc tggatttctg gcctttgctt gcggactggt
     3361 tcagtgagca attctcaacg ggcgtgttga tcgtgccttg tatgctgacg ttggctattc
     3421 ctggagtgct gccgcgcttt aaagcagaac agatgatgcc cgccatcgcg cttattgtgt
     3481 cggttattgc ctcggtagtc attggcggag cggggagtct ggcgttcccg ctgcctgcat
     3541 taatctggtg tgcagtgcgc tatacgccgc aggtaacatg tctgttgacc tttgtcaccg
     3601 gtgcggtgga aatcgtactg gtggcaaatt cggtgattga tatctcggtc ggttcgccgt
     3661 tctccattcc ggaaatgttc tccgcacgtc tcggtattgc cacgatggcg atatgcccaa
     3721 ttatggtttc ttttagcgtg gcagcgatca attcgctaat gaagcaagtt gcgctgcgag
     3781 ccgactttga ttttctgact caggtttact cacggtccgg tctttatgag gcgctgaaaa
     3841 gtccatcgct gaaacagaca caacatctga cggtcatgct gcttgatatc gactatttca
     3901 aaagcattaa cgataactat ggacatgaat gtggcgataa agtgttaagc gtgtttgccc
     3961 ggcatattca gaagattgtc ggtgataagg ggctggtggc gcgcatgggc ggcgaagaat
     4021 ttgctgttgc agtgccgtcg gtgaatcctg tcgatggtct gctaatggcg gaaaaaatcc
     4081 gtaaaggcgt tgaactgcaa ccattcacct ggcaacaaaa aacgctttat ctcacggtaa
     4141 gtattggcgt cggtagtggt cgcgcatcgt accgaacgct gaccgatgat tttaataaat
     4201 tgatggtcga agccgatacg tgtctgtatc gctcgaagaa agatgggcgc aaccgtacca
     4261 gcactatgcg ttacggtgag gaagttgtct gacatcttta ttcattccac gcgatttgaa
     4321 tgcaatgtgt tctaccactt tatgatccag gaaaaggcgt atttcctcga ttaaaccatg
     4381 atccgcgcca cacttttctc ataaaactgc ttattaatca ttaggagttg atcaaaacag
     4441 gggttcggcg tattaaagtt tgccaacctg tcgcaccaat tcaaacaggt tgtatgacta
     4501 accagaaggg gacccattgt gaaaacacta aatcgtcgcg attttcccgg tgcacagtat
     4561 ccagaacgta tcattcagtt tggtgaaggt aacttcctgc gcgcctttgt tgactggcaa
     4621 atcgatctcc tgaatgagca caccgatctg aattctggcg tggtcgttgt tcgtccgatt
     4681 gaaacttcat tcccgccgtc actgagcacg caggatggtc tgtacaccac cattatccgt
     4741 ggcctgaatg agaaggggga agcggtcagc gacgcgcgtc tgattcgctc ggttaatcgt
     4801 gaaatcagcg tctacagtga atacgatgaa ttcctgaaac tggcgcacaa tccggaaatg
     4861 cgctttgttt tctctaacac caccgaagcg ggtatcagct accatgcggg cgataaattc
     4921 gatgacgcgc cagcggtaag ctatccggca aaactgaccc gtctgctgtt cgaacgcttt
     4981 agccatttca acggtgcgct ggataaaggt tggatcatca tcccgtgtga gttgatcgac
     5041 tacaatggcg acgcgttgcg tgaactggtg ctgcgctatg cgcaagagtg ggcactgcca
     5101 gaagcattta ttcaatggct ggatcaggct aacagcttct gttctacgct ggtggaccgt
     5161 atcgttaccg gttatccgcg cgatgaagtg gctaaactgg aagaagagct gggttatcac
     5221 gatggtttcc tcgacaccgc tgaacacttt tacctgtttg tgattcaggg accgaaatcc
     5281 ttagcgactg aactgcgtct ggacaaatat ccgctcaacg tgctgattgt tgacgatatt
     5341 aaaccgtaca aagaacgcaa agtggcaatc ctcaacggtg cgcacaccgc gctggtgccg
     5401 gtggcgttcc aggcagggct ggataccgta ggtgaagcga tgaacgatgc tgaaatttgc
     5461 gcattcgttg aaaaagctat ctacgaagaa attattccgg aactggattt gcctcgtgat
     5521 gaattggaat ctttcgccag tgcagtcacc gggcgtttcc gtaacccgta cattaagcat
     5581 cagctgctgt ctatcgcgct caacggtatg accaagttcc gcacccgcat cctgccgcag
     5641 ctgctggcag ggcagaaggc aaaaggcaca cttccggcgc gccttacttt cgcattagcg
     5701 gcattgattg ccttctatcg cggtgagcgt aacggagaaa catatccggt acaggacgat
     5761 gcacactggc tggaacgtta tcagcagctc tggagccagc atcgtgaccg tgttatcggc
     5821 acccaggaac tggtagcgat tgttttggca gaaaaagacc actgggagca ggacctgacg
     5881 caagtgcctg gtctggtcga gcaggttgct aatgacctgg atgcgattct tgaaaaaggg
     5941 atgcgcgaag ctgtacgtcc gttgtgctaa taacaccgtt acttctgaac ccggtttcga
     6001 ccgggtttct tatttcacta tattagttac aacatcctat gtgcctttat cattaacagg
     6061 tgccacatgc agcgcctgtt aatgttgtaa gcttgtaggt aatttgtaag tagcgtcttg
     6121 aggatgtgat cgtaatcacg tttaataggg cgactttttc acgcctgaag ataaccatga
     6181 ttgttcgtcc acaacaacac tggctgcgcc gtatttttgt ctggcacggc tcagtattat
     6241 ccaagatatc atcgcgctta ctactcaatt ttctcttttc tatcgctgtt attttcatgc
     6301 tgccctggta cacgcatctg ggcatcaaat tcaccctcgc accgttcagc attctcggtg
     6361 tcgccatcgc catttttctt ggttttcgta ataatgccgg gtacgcccgt tacgttgaag
     6421 cgcgaaaact ttgggggcag ttgatgattg cctcacggtc gttactgcgc gaggtaaaaa
     6481 cgacattgcc ggattcggca agtgtaaggg agtttgcccg gctgcaaatc gccttcgccc
     6541 actgtttacg catgacatta cgcaaacagc cacaggcgga agtgctggct cattatctca
     6601 agactgaaga tcttcagcct gtactggctt cgaactctcc agctaaccgt atcttgttaa
     6661 taatggggga gtggttggcg gttcagcacc gcaatgggca gctttcagat atcctgttta
     6721 ttagcctcaa cgatcggctt aatgatattt cagtggttct ggcaggctgt gagcgcattg
     6781 cctacacgcc aattcccttt gcctacaccc tgattttgca tcgtaccgtt tatctgtttt
     6841 gtatcatgct gccgttcgcg ctggtcgtgg acctgcatta catgacgcct tttatctctg
     6901 tgctgatttc ctacactttt atttcgctgg attgtctggc ggaagaactg gaagatccgt
     6961 tcggtactga aaacaatgag ttaccgctgg atgccatctg caacgctatt gaaattgacc
     7021 tgttacagat gaacgatgaa gcagaaattc cagcaaaaat tcttcccgat cgtcattacc
     7081 agctaacgtg ataattactc cgtacggcgg gcaacaataa acagacgcgg aaatgccagc
     7141 agtatctgtc cgttctcttg cagtggatac tgctcttcca gcatctgatg gtagcgcgta
     7201 agaaaaagct gctgttcgct ctcggtcaga tcctgtaacc acggacgtaa tccagtggcg
     7261 gtcacccaat cgataatcgc ctggtgcgac ggcatctggt gatagtaagt ggttcgccag
     7321 atatcgacct cacatccggc ttcgctcaaa atatcgtagt aagcatgaac gccagccaac
     7381 ggctcacgcc cgcgatccgg gtagttttgt tcccaggcaa cttcgcgcat gagcacatgg
     7441 gtcggctcca gccagttatc tggcatctgt actgccagca cgccctgcgg attaagtaaa
     7501 gaaaccaagt gaggaaacaa ttcgtagtgg tcgggcagcc attgcagtga ggcattagca
     7561 aaaatcagat cgagtgcctg ttccggttgc cagttgcgga tgtctgcttc cacgaactgg
     7621 cagtctggca aagcactgcg cgcttcagca atcatcgccg gagacgagtc gatgcctgtt
     7681 atcctggccg caggccaacg ttgatgcagc agggcggtgc tgttacctgg gccacagcca
     7741 agatcggcaa catattcgac attctccagc ggcactctgg caagcagctc caccgccgga
     7801 cgcgatcgtt cagcggaaaa gtgcagatat aaagaggggt tccag
//
LOCUS       DAJVTL010000171         7810 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.173, whole genome shotgun sequence.
ACCESSION   DAJVTL010000171 DAJVTL010000000
VERSION     DAJVTL010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7810
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.173"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..585
                     /locus_tag="OQQ26_003861"
     CDS             <1..585
                     /locus_tag="OQQ26_003861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS911 family transposase"
                     /protein_id="HCS1859157.1"
                     /translation="RYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAY
                     LAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQF
                     RQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVG
                     YYSALRPHEYNGGLPPNESENRYWKNSNSVASFC"
     gene            complement(657..1313)
                     /gene="ospZ"
                     /locus_tag="OQQ26_003862"
     CDS             complement(657..1313)
                     /gene="ospZ"
                     /locus_tag="OQQ26_003862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     methyltransferase OspZ"
                     /protein_id="HCS1859158.1"
                     /translation="MISPIKNIKNVFPINTANTEYIVRNIYPRVEHGYFNESPNIYDK
                     KYISGITRSMAQLKIEEFINEKSRRLNYMKTMYSPCPEDFQPISRDEASTPEGSWLTV
                     ISGKRPMGQFSVDSLYHPDLHALCELPEISCKIFPKENSDFLYIIVVFRNDSPQGELR
                     ANRFIELYDIKREIMQVLRDESPELKSIKSEIIIAREMEELFSYASEEIDSYIKQMNE
                     "
     gene            1369..1521
                     /locus_tag="OQQ26_003863"
                     /pseudo
     CDS             1369..1521
                     /locus_tag="OQQ26_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            2857..3804
                     /gene="icsP"
                     /locus_tag="OQQ26_003864"
     CDS             2857..3804
                     /gene="icsP"
                     /locus_tag="OQQ26_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease IcsP"
                     /protein_id="HCS1859159.1"
                     /translation="MKLKFLVLALCVPAIFTTHATTNYPLFIPDNISTDISLGSLSGK
                     TKERVYHPKEGGRKISQLDWKYSNATIVRGGIDWKLIPKVSFGVSGWTTLGNQKASMV
                     DKDWNNSNTPQVWTDQSWHPNTHLRDANEFELNLKGWLLNNLDYRLGLIAGYQESRYS
                     FNAMGGSYIYSENGGNRNKKGAHPSGERTIDYKQLFKIPYIGLTANYRHENFEFGAEL
                     KYSGWVRSSDTDKHYQTETIFKDEIKNQNYCSVAANIGYYVTPSAKFYIEGSRNYISN
                     KKGDTSLYEQSTNISGTIKNSASIEYIGFLTSAGIKYIF"
     gene            complement(4366..4738)
                     /locus_tag="OQQ26_003865"
                     /pseudo
     CDS             complement(4366..4738)
                     /locus_tag="OQQ26_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611434.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            4982..5101
                     /locus_tag="OQQ26_003866"
                     /pseudo
     CDS             4982..5101
                     /locus_tag="OQQ26_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309413.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
     gene            5351..6217
                     /gene="ospB"
                     /locus_tag="OQQ26_003867"
     CDS             5351..6217
                     /gene="ospB"
                     /locus_tag="OQQ26_003867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspB"
                     /protein_id="HCS1859160.1"
                     /translation="MNLDGVRPYCRIVNKKNESISDIAFAHIIKRVKNSSCTHPKAAL
                     VFLGEKGFCDSNDVLSIMGQQIPRVFKNKMLYDYVFKNEKSKNDFLKMAESWLPQSEP
                     IVINNDDDALNAAAYFSVKKAKIKTVNDTDFKEYNKVYILGHGSPGSHQLGLGSELID
                     VQTIISRMKDCGILNVKDIRFTSCGSADKVAPKNFNNAPAESLSCILNSLPFFKEKES
                     LLEQIKKHLENDESLSDGLKISGYHGYGVHYGQELFPYSHYRSTSIPADPEHTVKRSS
                     QKKTFIINKELD"
     gene            6546..7286
                     /gene="phoN2"
                     /locus_tag="OQQ26_003868"
     CDS             6546..7286
                     /gene="phoN2"
                     /locus_tag="OQQ26_003868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAP2 family phosphatase PhoN2"
                     /protein_id="HCS1859161.1"
                     /translation="MKTKNFLLFCIATNMIFIPSANALKAEGFLTQQTSPDSLSILPP
                     PPAEDSVVFQADKAHYEFGRSLRDANRVRLASEDAYYENFGLAFSDAYGMDISRENTP
                     ILYQLLTQVLQDSHDYAVRNAKEYYKRVRPFVIYKDATCTPDKDEKMAITGSYPSGHA
                     SFGWAVALILAEINPQRKAEILRRGYEFGESRVICGAHWQSDVEAGRLMGASVVAVLH
                     NTPEFTKSLSEAKKEFEELNTPTNELTP"
     gene            complement(7639..>7810)
                     /locus_tag="OQQ26_003869"
     CDS             complement(7639..>7810)
                     /locus_tag="OQQ26_003869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
                     /protein_id="HCS1859162.1"
                     /translation="KVLEYFINNGLVDVNKKFQKANSGDTMLDNAMKSKDSKMIDFLL
                     KNGAVSGKRFER"
BASE COUNT         2409 a         1502 c         1557 g         2342 t
ORIGIN      
        1 cggtataaac gtggtggtca tgaacatgtt gctatcccta actaccttga aaggcagttc
       61 gccgtgaccg agccaaatca ggtgtggtgc ggtgatgtga cctatatctg gacgggtaag
      121 cgctgggcgt acctcgccgt tgttctcgac ctgttcgcaa gaaaaccagt gggctgggcc
      181 atgtcgttct cgccggacag caggctcacc atgaaagcgc tggaaatggc atgggaaacc
      241 cgtggtaagc ccggcggggt gatgttccac agcgatcagg gcagtcatta tacgagcagg
      301 cagttccggc agttattgtg gcgataccag atcagacaga gtatgagccg gcgcggaaac
      361 tgctgggata acagcccaat ggaacgcttc ttcaggagtc tgaagaacga atggatgccg
      421 gtggtgggtt acgtaagctt cagcgaggca gctcacgcca taacggacta tatcgttgga
      481 tattacagcg cactaagacc gcacgaatat aacggtgggt tacccccaaa cgaatcggaa
      541 aatcgatact ggaaaaactc taactcggtg gccagttttt gttgaccact tcatacaatt
      601 aatatacatt aagtaacagg cattcgagcc ttgatttgag aaagcctgtc attcattcat
      661 tcattcattt gttttatgta gctatctatt tcctctgatg cataactaaa aagttcttcc
      721 atttcacgag caataataat ctcagattta atagacttta actctggcga ctcatctctt
      781 aacacttgca taatctctct ttttatatca tatagttcta taaaccgatt tgcccgtagt
      841 tctccttggg gagaatcatt tctgaataca acaattatat acaaaaaatc actattttct
      901 ttagggaaga tcttacaact aatctctggg agctcacata atgcatgtaa gtcaggatgg
      961 tacaaactat ccacagaaaa ttgccccata ggacgttttc cagatataac tgtcaaccag
     1021 cttccttccg gtgtactggc ttcgtctctg gaaataggct gaaaatcttc cggacatgga
     1081 gaatacattg tcttcatata attaagtcgt ctggatttct cattaataaa ctcctctatt
     1141 tttaattgtg ccatacttct ggttatacca gagatatact tcttgtcata tatgtttggt
     1201 gattcattaa agtaaccatg ttcaactcta ggataaatat ttctcactat atattcagta
     1261 tttgcagtat ttattggaaa tacgttctta atattcttga tgggactaat cattttaatc
     1321 tctatactca aatataaaca ttaccatgaa caatataatt gttcctaagt ggaatgtctc
     1381 cacggagaac actttatcta tcgggaaata gtgcgggcaa cagtgtttaa ttatatcgag
     1441 tgcgattaca atcgctggcg acggcaccgt tggtgtggcg gcctcagtcc ggaacaattt
     1501 gaaaaccaga acctcgctta ggcctgtgtc catattacgt gggtaggatc aataaagacg
     1561 ttttatatgt gtctgcttgc agccagaaaa tttataccct gcaggtatca taaacatgct
     1621 tgataactta attggggctc cctcttcctt ttatggtgta attgtttgat tgaatacttc
     1681 cggggatttc agtatgaaat gaagtatatt taatatactt tacaaaaagt ttgtattagt
     1741 ggaataagga caatagctta tccaaactgc caagcctctt tattataagt aagatctggc
     1801 actggaatat tctcaaaagg actaacatca tcaccacgac cttcaaccaa ccattttatt
     1861 gcatttaaat cccagaatag ttcagtagtg gtcaatttgg gaaacgcaca atattgtacg
     1921 gttacgttat cgcaatagag tgaactcccg ccctatacgg cgttttcaag gattagtcct
     1981 taatcggaca accacattaa agcataataa ataattaagc tttaataata tactatagat
     2041 acagttctat tataaaaaat actattttag gtgatgcatt aaattagtag aatatttatt
     2101 cttttataaa agcaccaatg aattgtccaa gtaaacatga ggtaaaatgt gtagaggata
     2161 actgagtttg gtcactttaa ctgtattagt cgcagtctga ctctcgactt taaaaggatg
     2221 ggaattacct gtactgatag tgagaaagct ttccattgaa ataagtcaaa taaaagttga
     2281 tggcttcagt gctaaagtga ggtgcccgct agccgtattc actcgaatcg gaattcaatg
     2341 tattgcttct gccatttcca taatatttca cgggaaaaac aaaatctgaa aaactatact
     2401 taagtgttgt attgagtcag ttgagataca aatacatatt tatcagcaca cgttacgtca
     2461 aatacaggag gttgtcatgt tggtactgaa aggcacgttg gctattgcag ccgtgatgac
     2521 aatttattgt cttatcgttg ttcttatgga acgcttttct gattgatttc atattggcga
     2581 gagaacaaga aggtgagtag aattgtcgcg gaatcctgaa actatcagcc tcaggtatga
     2641 acaccaaaag gtaggtagag aaatctatgg cccccgttac tttattcgca caatgaggta
     2701 tttttttatt tttacaaaag ttcaataaat attataataa aagatatgtt cttggtaaca
     2761 taaacaaata tttaattaaa ataatgcttg gcattgacgt ttatcttata aagtaagaag
     2821 atcatggaca tttcaaccaa aaaagtagag ttctcgatga aattaaaatt ccttgtactt
     2881 gcactttgtg tacctgcgat ctttactaca catgctacca ctaactatcc acttttcata
     2941 ccggacaaca tcagtacgga tattagtcta ggatctctga gtggcaaaac aaaagaacgc
     3001 gtttatcatc ccaaggaagg ggggagaaaa attagtcaac tggactggaa atacagtaat
     3061 gcgactattg ttagaggtgg catcgattgg aagctaattc caaaagtgtc tttcggagtt
     3121 tccggttgga ctactttagg taaccagaaa gcaagcatgg ttgataaaga ctggaacaat
     3181 tccaataccc ctcaggtatg gaccgaccag agctggcatc ccaatacgca tctccgtgat
     3241 gctaacgaat tcgagctgaa tcttaaaggt tggttattaa ataatttgga ttatcgactt
     3301 ggactaatag caggttacca agagagtcgt tacagtttta atgcaatggg agggagttat
     3361 atttatagtg aaaacggggg gaacaggaat aaaaaagggg cacatcctag tggtgaaaga
     3421 acaatagatt acaaacagct cttcaaaata ccttatattg gattaactgc taattaccgc
     3481 catgagaatt ttgagtttgg agcagaactg aaatatagtg gttgggttcg ttcatctgat
     3541 acagataaac actatcagac tgagacaatt tttaaagatg aaataaaaaa ccaaaattac
     3601 tgctctgttg ctgcgaatat tggatactat gtcaccccca gtgcaaaatt ttatatagaa
     3661 ggctccagaa attacatttc taataaaaaa ggtgatacat ctctttatga gcaaagtacc
     3721 aatatatctg gcaccattaa aaatagtgca agtattgaat atattggttt tctcacttcc
     3781 gcaggtataa agtatatttt ttgaattggt tcaccgagtt gattacgttt tcatggctaa
     3841 aaattgccgc ccattgtgag tcatattcgc cctgactttc cagaaccata cgaactgccc
     3901 gttgacggac ttcgggggaa aaacgtgtat ttttagtcat tctgtttacc tctttctcag
     3961 ggcgtttagt ctccaggatt tccggggcgg ttcaaaaaac tcttcgttga ttactgtgga
     4021 cttactgttg gcattaccga ccctgagacc ggagaaataa gaaccgctta gatcatcgtg
     4081 gctgttctcg gggtatcaag ttacacatgg gcagaggcta cccaaggtct actattatcg
     4141 cctgaaagcg ctgatggaac agtgctatca gggacatgct gatgaaaata cctaaataat
     4201 cagccagcac tctatctttc caaatccaca gcatagcaaa gagagcaaaa gagcctgtaa
     4261 attcagaaat taaggaaacg cctcttggtg cacataatct atcttatgtt aaatgaaatc
     4321 taatttcttg attatatgct ggatcgttcg tgggtggctt tgcccctata tttccagaca
     4381 cctgttatca ttggcccgct gccgcagata ttcccgtggc gagcgataat ccagcgcact
     4441 atgcggatgc cattcgttat aatgctcgaa tgcctctgca aggttctttg ctgccgttaa
     4501 cccgtcaggt ttgggcatga tactgatgta gtcacacttt attgttttca cgaagctctt
     4561 tgctattctg ttactctccg gactccgcac cgccgtgttc ttcggttcaa caaagtccca
     4621 acatccgggt gaactggcgt gtttcattag cccggtagca tgaaccatta tccgtcagtc
     4681 acttcactgg agacgccgga agctcgttgc cgaagtggtg ttccaccgct cccagcatgt
     4741 cgccaacggg agagcatcta cggtctgatt gaactgttta ttcaaattgt ccaccgtctg
     4801 tcagtacgct ctgaacgtcg gctggttaaa acactgctcg ctgattttca gagggttcac
     4861 ggtaaaacag cacttttatt ccggattgcg gaagcggctc tgaataatcc ggatgggctg
     4921 gttaaagagg ttgtgtacca tctgcatatt gttgaaccag atcgcagcgg taagagaagt
     4981 tcatcatact tggcgcagtt acgcgatgtt tctgctagag gtgatgccgt aaagaacggc
     5041 agaacattac cggaacaaga tagcggtcta cctgcactgg tatcagaccc ggggcttccc
     5101 cggatgatct ccacggtact ttaggtactg tgtctatatt atgtaggtag gatcaattaa
     5161 ctttgtagtt gaaattcttt cattgaaata atgaataaaa aagacaaacc gcattaaaca
     5221 atgccagaat ataattgcat ttttgttccg tttttttaaa tcatagtata caaagaagct
     5281 tgcatactat atgaaaatat aacacccttt actatgatgt ttatagaaca atatatggag
     5341 tcatgtaggt atgaatttag atggtgttag accatactgt agaatagtca ataaaaagaa
     5401 tgaaagcata tcagatattg catttgcaca tataataaaa agggtaaaaa attcatcatg
     5461 tactcaccca aaagcagcat tggttttttt aggagagaaa ggtttttgtg atagcaatga
     5521 tgttctatct attatgggac aacaaatacc aagagtattt aagaacaaga tgttatatga
     5581 ttatgttttt aaaaatgaaa aaagtaaaaa tgattttcta aaaatggctg aatcatggct
     5641 accacagagt gaaccaatag taataaataa tgatgatgac gcattgaatg ctgctgctta
     5701 tttttctgta aaaaaagcga aaataaaaac agtaaacgat actgatttta aagagtataa
     5761 taaggtttat attcttgggc acggtagtcc tggttctcat caattaggcc ttggttcgga
     5821 acttattgat gtacaaacaa tcatttcaag aatgaaagac tgtggtattc taaatgtgaa
     5881 agatatccgt tttacttcat gcggctccgc tgataaagtg gctcctaaaa attttaacaa
     5941 tgcccctgct gaaagtcttt cttgtatcct taactctctg ccttttttta aggaaaaaga
     6001 atctttgcta gagcagataa aaaaacacct tgaaaacgat gagtcattga gtgatggtct
     6061 aaaaatatcc ggctatcatg gatatggagt tcactatggt caagagcttt ttccctactc
     6121 acattatcgt tcaacttcaa ttcctgctga tccggagcat acagtaaaaa gaagctctca
     6181 gaaaaagact tttattatta ataaagaact ggattagtat aaaattttta acctatagtt
     6241 aattgtttgc atttaagatg aagttatttt atctttagta gaaaagtgct tccctatgag
     6301 ggaaaatcac aaatcatcat aatacagaga caaaacgata cgaacaaata gataaaaaac
     6361 atcattcttt taccacatta tttttcgtga atatgaaaaa taatgttatt actttaatat
     6421 aagactattt tttgtttttc catcactctg ttcaaatttt tccgcatgac ttgtgttttt
     6481 tgtaacacag ctcgtttttt acagctgacc aaaatcatca attaattatg ctaaggaaat
     6541 aaattatgaa aaccaaaaac tttcttcttt tttgtattgc tacaaatatg atttttatcc
     6601 cctcagcaaa tgctctgaag gcagaaggtt ttctcactca acaaacttca ccagacagtt
     6661 tgtcaatact tccgccgcct ccggcagagg attcagtagt atttcaggct gacaaagctc
     6721 attatgaatt cggccgctcg ctccgggatg ctaatcgtgt acgtctcgct agcgaagatg
     6781 catactacga gaattttggt cttgcatttt cagatgctta tggcatggat atttcaaggg
     6841 aaaatacccc aatcttatat cagttgttaa cacaagtact acaggatagc catgattacg
     6901 ccgtgcgtaa cgccaaagaa tattataaaa gagttcgtcc attcgttatt tataaagacg
     6961 caacctgtac acctgataaa gatgagaaaa tggctatcac tggctcttat ccctctggtc
     7021 atgcatcctt tggttgggca gtagcactga tacttgcgga gattaatcct caacgtaaag
     7081 cggaaatact tcgacgtgga tatgagtttg gagaaagtcg ggtcatctgc ggtgcgcatt
     7141 ggcaaagcga tgtagaggct gggcgtttaa tgggagcatc ggttgttgca gtacttcata
     7201 atacacctga atttaccaaa agccttagcg aagccaaaaa agagtttgaa gaattaaata
     7261 ctcctaccaa tgaactgacc ccataaagct ggacagcctg tatcaggcta tggagggccc
     7321 atagacaaat ctaccctata tgagcatagg aggagtctat gggcacacca cgttttaccc
     7381 ctgaatttaa gggattactg gaaaggctgg gacatatccc tccggcagaa gcagaaaaag
     7441 cttattatgc tgccatcgga aacgatgatc tggcaacctg agttcacaga taaaacattc
     7501 tctaggaaac tcggggcggt tccgttcacc acatgcaatg tggtgttgca ggggaacggt
     7561 ctgcaccatc ccctatgtcg atcaatataa cagaaatgac aacttcagat tcagggcaca
     7621 acctaaatat attttaggtc acctctcaaa tcgtttgcct gataccgctc cattttttaa
     7681 taaaaaatca atcatttttg aatctttgct tttcattgca ttgtcaagca tagtgtcccc
     7741 actatttgct ttttgaaatt ttttgtttac atcaaccaat ccattattga taaaatattc
     7801 tagcacttta
//
LOCUS       DAJVTL010000172         7743 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.174, whole genome shotgun sequence.
ACCESSION   DAJVTL010000172 DAJVTL010000000
VERSION     DAJVTL010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7743
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.174"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..376
                     /locus_tag="OQQ26_003870"
     CDS             <1..376
                     /locus_tag="OQQ26_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859163.1"
                     /translation="RRPNFPYEFKIALVEQSLQPGACVVQIARENGINDNLLFNWRHQ
                     YRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLR
                     LKGKLTPALLQILIREIKGSSH"
     gene            376..723
                     /gene="tnpB"
                     /locus_tag="OQQ26_003871"
     CDS             376..723
                     /gene="tnpB"
                     /locus_tag="OQQ26_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1859164.1"
                     /translation="MISFPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLF
                     IFRGRRGDQIKVLWADSDGLCLFTRRLERGRFVWPVTRDGKVHLTPAQLSMLLEGIDW
                     KHPKRTERAGIRI"
     gene            743..1972
                     /locus_tag="OQQ26_003872"
                     /pseudo
     CDS             743..1972
                     /locus_tag="OQQ26_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            1976..2135
                     /locus_tag="OQQ26_003873"
                     /pseudo
     CDS             1976..2135
                     /locus_tag="OQQ26_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            2724..3022
                     /locus_tag="OQQ26_003874"
                     /pseudo
     CDS             2724..3022
                     /locus_tag="OQQ26_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343747.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            3104..3241
                     /locus_tag="OQQ26_003875"
                     /pseudo
     CDS             3104..3241
                     /locus_tag="OQQ26_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787828.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            3611..4288
                     /gene="ospD1"
                     /locus_tag="OQQ26_003876"
     CDS             3611..4288
                     /gene="ospD1"
                     /locus_tag="OQQ26_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector/anti-activator
                     OspD1"
                     /protein_id="HCS1859165.1"
                     /translation="MSINNYGLHPANNKNMHLIIGSNTANENKGMKSNIINVTNTAIS
                     HAINEEKSGGGYSGISFRKLAKIQSISIPTKNNKEYNRHNLFSLIWHGNADAACKYGE
                     SLLAAEIPKEEKLEVLAARNNAGESALFIALQEGHSAAIQAYGDFIKTFDLSPKETIK
                     LLDVRDNEGLPGLFLAAGKGNIEAMMAYINICHHSGIKLTEIADRLNNNEQDMFNIIS
                     DKIQELF"
     gene            4612..4722
                     /locus_tag="OQQ26_003877"
                     /pseudo
     CDS             4612..4722
                     /locus_tag="OQQ26_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            4800..5114
                     /locus_tag="OQQ26_003878"
     CDS             4800..5114
                     /locus_tag="OQQ26_003878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859166.1"
                     /translation="MLQRQRGKVGFAQLPVDFVAIEPDSVQGVGKRANLTNRCFIIRI
                     NDSFKKRQGFIEFISNSGSGHTVTVYTKRRFQRGVFMNSLNTNVVKPVMYRLRSSADA
                     RP"
     gene            5396..5962
                     /gene="ipgB2"
                     /locus_tag="OQQ26_003879"
     CDS             5396..5962
                     /gene="ipgB2"
                     /locus_tag="OQQ26_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion effector IpgB2"
                     /protein_id="HCS1859167.1"
                     /translation="MLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKIN
                     TSILSSVSEQIGENITDWKNDEKKVYVSRVVNQCIDKFCAEHSRKIGDNLRKQIFKQV
                     EKDYRISLDINAAQSSINHLVSGSSYFKKKMDELCEGMNRSVKNDTTSNVANLISDQF
                     FEKNVQYIDLKKLRGNMSDYITNLESPF"
     gene            complement(6224..6346)
                     /locus_tag="OQQ26_003880"
                     /pseudo
     CDS             complement(6224..6346)
                     /locus_tag="OQQ26_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            6489..7043
                     /locus_tag="OQQ26_003881"
                     /pseudo
     CDS             6489..7043
                     /locus_tag="OQQ26_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS3H family transposase"
     gene            7383..7743
                     /locus_tag="OQQ26_003882"
                     /pseudo
     CDS             7383..7743
                     /locus_tag="OQQ26_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT         2259 a         1690 c         1805 g         1989 t
ORIGIN      
        1 ccggcggcct aattttcctt atgaatttaa aatcgcctta gtggagcagt cactgcagcc
       61 cggagcctgt gtggtgcaga tcgcccgtga aaacggaatc aacgataacc tgctcttcaa
      121 ctggcgccat caataccgga aaggtggcct gctgccttcc ggaaaaaata tgcctgcact
      181 gcttcccgtg acgttaacgc cggagccgga taataaaatc ccggctccgg cacaggaacc
      241 agagcagata aatacaccgt ccgacagtct gtgctgtgag ctggttctgc cggccggaac
      301 tctcaggctt aaaggtaaac tgacgccggc gttattacag atacttatcc gcgaaataaa
      361 agggagcagc cactgatgat atctttccct gcaggttcgc gtatctggct ggttgcaggt
      421 atcaccgata tgcgaaatgg ctttaacggc ctggcctcaa aagttcagaa cgtcctgaag
      481 gatgacccgt tctccgggca tctgttcatc ttccgcggac gccggggtga ccagataaaa
      541 gtgttgtggg ctgacagtga cggactgtgc ctctttacca gacgcctgga gcggggccgc
      601 ttcgtctggc cggtcacccg tgacggcaag gtgcacctta ctccggccca gttatccatg
      661 cttcttgagg gcatcgactg gaaacacccg aaacgaacgg aacgcgctgg catccgcata
      721 taacccgttg taaagtgagg atatggacac ctcacttgct catgagaatg cccgcctgcg
      781 ggcactgttg cagacgcaac aggacaccat ccgccagatg gcgaaataca accgcctgct
      841 ctcacagcgg gtggcggctt atgcttccga aatcaaccgg ctgaaggcgc tggttgcgaa
      901 actgcagcgc atgcagttcg gtaaaagctc agaaaaactt cgcgcaaaaa ccgaacggca
      961 gatactggaa gcacaggagc gaatcagcgc acttcaggaa gaaatggcgg aaacgctggg
     1021 tgagcaatat gacccggtac tgccatctcc cctgcgccag tcttcagccc gtaaaccgtt
     1081 acctgcctca cttccccgtg aaacccgggt catccgtccg gaagaggaat gctgcccggc
     1141 ctgtggtggc gaactcagtt ctctgggatg tgatgtgtca gagcagctgg agcttatcag
     1201 cagcgccttt aaggttatcg aaacacaacg tccgaaactg gcctgttgcc ggtgtgacca
     1261 tatcgtgcag gcaccggtgc cttcaaaacc cattgcacgc agttatgccg gagcggggct
     1321 tctggcccat gttgtcgctg gaaaatatgc agactatctg ccgttatacc gccagtcaga
     1381 aatataccgt cgtcagggcg tggagctgag ccgtgccaca ctggggcgct ggacaggtgc
     1441 tgttgctgaa ctgctggaac cgctgtatga catcctgcgc cagtatgtgc tgatgcccgg
     1501 taaagtccat gccgatgata tccccgttcc ggtccaggag ccgggcagcg gtaaaacaag
     1561 gactgcccgg ctgtgggtct acgttcgtga tgaccgtaac gccggttcgg aaatgcctcc
     1621 ggcggtctgg ttcgcgtact caccggaccg gaaaggtatc catccacaga atcatctggc
     1681 cggttacagc ggagtgcttc aggccgatgc ttacggtggt taccgggcgt tgtacgaatc
     1741 cggcagaata acggaagccg catgtatggc tcatgtccgg agaaaaatcc acgatgtgca
     1801 tgcaagagtg ccaaccgaca tcaccacgga ggccctgcag cgtatcggtg aactgtatgc
     1861 catcgaggca gaagtccggg gatgttcagc agaacagcgt ctggcggcaa gaaaagccag
     1921 agccgcgcca ctgatgcagt cactgtatga ctggatacag caacagatga aaattcattc
     1981 gctgaaaatg gaatgtctcc acggagaaca ctattatcca tcgggaaata gtgcgggcaa
     2041 cagtgtttag ttatatcgag tgcgattaca atcgctggcg acggcaccgt tggtgtggtg
     2101 gtctcagtcc ggaacaattt gaaaaccaga gcctcactta cgactgtgtc catattatgt
     2161 gggtaggatc aataaagacg ttttatatgt gtctgcttgc agccagaaaa tttataccct
     2221 gcaggtatca taaacatgct tgacaactta attagggccc cctcttcctt ttatagtgta
     2281 attgtttgat tgaatacttc cggggatttc agtatgaaat gaagtatatt taatatactt
     2341 tacaaaaagt ttgtattagt ggaataagaa caatagttta tccaaactgc caagcccctt
     2401 tattataagt aagatctggc actggaatat tctcaaaagg actaacatca tcaccacgac
     2461 cttcaaccaa ccataaaaaa caatactatt ttaggtgatg tattaaatta gtagaatatt
     2521 tattcttcta taaaagcact accccaagag gttaatcagg tcatccatga ttatttatca
     2581 tatactaact atgtgggatt tcaacgtgaa aacttatttt cactataatc ttcaggattc
     2641 gaagatcata ggagcctgta cataagtttg tataattctc tgatgttgaa ctatttaatt
     2701 tgatatcaaa tgaaggtgaa tttatgaatg aaaaacagtt gacatctaat aagttgcggg
     2761 ctttagctaa tgaactagcc aaaagtctca aaaatcctga agatctcagt cagtttgatt
     2821 ggatgctgaa aatgaaaccg tactcaatgc taatatgact catcatcttg ggtgcgagaa
     2881 aaatcagctt agatctggca gcaattcccg caatggttgc ttaacgaaga ttatcactac
     2941 tggagatgaa cctctggaaa tccgtactct gcgtgatcgt aatggcactt ttgaaccgca
     3001 acagctgaag aaaaaccagc cctagattac taaatctgtc gggcgatgga ttaactggtt
     3061 caggctgtct ggtgctgaag gcctgaagtc actgctgtca gtgatgtggc cggctcttca
     3121 tgagacaata acccgtaatc atcagtgccg ttcaatatgg ccactgttga aaaaagttcg
     3181 tcactttatg gagacggtta gcccacttcc cggagaaaaa catagtctgg acaaagtgta
     3241 gcggtattag gctcacatat ttagatgtag ataagccgga gctggcagtt aaatctaggc
     3301 agcatcacag aaatggacaa cgccccttaa ggactggcgt atggcaatga gctgctttat
     3361 tatcaagttt ggtgatcgcc ttgacggtca cttctgagtg aaggcgcttg cacagaatgg
     3421 taaacggact cgattattga atcttaggga taagatatat ctacgatatg tcaatatacg
     3481 aaatcgaaag aatttattgg tgaatatagc cattcaatgt ggcaatggtt tttttagatt
     3541 agcaatagac taatatctat tacattacaa aaataggtta ttgttttttt agcaaaaagg
     3601 atgaacaaaa atgtcaataa ataactatgg attacatcca gcaaacaaca aaaatatgca
     3661 cctaataata ggtagcaata ctgctaatga aaataaagga atgaaaagta atatcattaa
     3721 cgtgacaaat accgctatat cccacgccat caatgaagaa aaatcagggg ggggatatag
     3781 tggtatttct ttcagaaaat tggccaaaat acagagcata tccattccga caaagaataa
     3841 taaggagtat aaccgccata atttgttttc attgatttgg catggaaatg ccgatgcagc
     3901 gtgtaaatac ggtgaatcgc tgttggcagc cgaaataccc aaagaggaaa aactagaagt
     3961 tcttgcagca cgaaataatg ctggggaatc tgctttgttc atagctcttc aagaaggtca
     4021 ttccgctgcg attcaagctt atggagattt tattaaaact tttgatttat caccaaaaga
     4081 aacgattaaa ctattggatg taagagataa tgaggggtta ccaggattat ttctggccgc
     4141 agggaaaggg aatatcgagg ctatgatggc atatataaat atatgccatc atagtgggat
     4201 aaaacttaca gaaatagcag acagacttaa caataatgaa caagacatgt ttaatattat
     4261 ttctgacaaa atacaagagt tgttttaagt gtgctaaata gctgcaaaga attgcactta
     4321 gaaggatctc tccccgaatt gtgtgatctg cttaatttct aaaaagaaac aaacagttaa
     4381 ctagactgag cgatactacc catagaagca gtttcccatg acgaacgaca ctggacgcaa
     4441 aaacaatcat aaaaaacaca ataaatgtaa tgaacacatc ccaccctatt aagtaaagtg
     4501 cactgtgata gaggaaggga aatacaggaa ggtgtggagc cttgcagatt tctggcatca
     4561 tagtgcccaa tacggaatgc ataaagcccc ctcagactgg agactccaca aatgaaatat
     4621 acagtgttta attatatcaa gtgcgattac aatcgctgac gacggcacag ttggtgtgga
     4681 ggtctcagtc ctgaacaatt tgaaaaccag aacctcactt aagcctgtgt tcatattacg
     4741 tgggtaggat catactttta tagaagctgt cagcggctat gtcccagcca aatcacttca
     4801 tgctccagcg ccagagaggc aaggttgggt ttgctcagct gccggttgat tttgttgcga
     4861 ttgaaccgga cagcgtccag ggcgtcggca aaagagcgaa tctcaccaat cgttgtttca
     4921 ttatccgcat taacgatagc ttcaagaaac gccaaggttt tatcgaattc atcagcaaca
     4981 gtggctccgg gcataccgtg accgtttata caaaacggcg ttttcagcgt ggagttttca
     5041 tgaatagcct caacacgaat gtcgtgaagc cagtgatgta tcggctacga tcctcagctg
     5101 atgccagacc ataggactga cactacgaac agcaatttta atgacgtaaa tcttcataac
     5161 tacaactaac agggcatcat tatgaatgat gccggttatt ttaccgctgt tggtcccttc
     5221 atttagggac tgccccaagt tttttcatac tctctttctc agagagttta gtctctggga
     5281 ttccagacgg tccatcattg agccaaggga gtaaagaact caaagcattt acagaattgt
     5341 ttgaatcagc taaaataatg acaatgttac tattttacat gacaaagtga ttataatgct
     5401 tggaacatct tttaataatt ttggaatcag tttatctcac aaaagatatt tttcaggaaa
     5461 ggtggatgag attatccgct gtacaatggg gaaaaggata gtaaaaatat catcaaccaa
     5521 aataaatact agtattttga gctctgtttc agaacaaatc ggtgaaaata ttacagattg
     5581 gaaaaatgat gaaaaaaaag tctacgtatc ccgggtggta aaccaatgta ttgataagtt
     5641 ttgtgcagaa cacagccgaa aaatcggcga taatctccgt aaacagatat ttaaacaggt
     5701 tgagaaagat tatcgcattt ctctagacat caatgctgca caaagttcca taaatcatct
     5761 tgtatcagga agcagttatt tcaaaaagaa aatggacgaa ctttgtgaag ggatgaatag
     5821 aagcgttaaa aatgatacaa caagcaatgt tgcaaatctt atttccgatc agttttttga
     5881 gaaaaatgtg caatatattg atctaaagaa attacgtggg aatatgagtg actatattac
     5941 aaatttagaa tcgcctttct gatgacagaa catcccgagt aaagaaacta agaaaagtaa
     6001 atacccagga attgcctgag cggtgctata tttctcctcg caagtaagtc ctaatatatt
     6061 gaattgttgt atagccagtt tttgtatttt cctagctcat ggatgtggga tccctctccc
     6121 ctttctctgc tcaaaggtaa gtggctcgtc agaatcatat tgatatttac tgagaagtca
     6181 gatcaacttt ccaaggcaac agatcgcgta cccggtttgc cggtcagtcc tggatatgtt
     6241 caataacgta acgcagccat ttttctggct ccacattgtt cagacggcat gtgccgatca
     6301 gcgagaacaa caccgctgca tgttcgtcac cgctgtcgga acctgcgagt cgagtcagcc
     6361 ggagagagtt tcactctccg gctgcttacg gaaccgtacg tgacactctc gcgtcatacg
     6421 gctcttgatc actcattcga tgcacgtagt aaataccagt gagcaaattg atcttaccca
     6481 gcaatacggt cagttaccgc gcacatggcc tgcctgtgtc agaaaatctg ctggagcagg
     6541 atttttacgc cagtggtccg aaccagaagt gggcgggaga catcacgtac ttacgtacag
     6601 atgaaggctg gctgtatctg gctgtggtca ttgacctgtg gtcacgtgcc gttattggct
     6661 ggtccatgtc accacgcctg acggcgcaac tggcctgcga tgccctgcag atggcgctgt
     6721 ggcggcgtaa gagaccccgg aacgttatcg ttcactcgga ccgaggaagt cagtactgtt
     6781 cagcagatta tcaggcgctg ctgaagtggc ataatctgcg tggcagtatg agcgcaaagg
     6841 gctgctgcta cgataatgcc tgcgtggaaa gcttctttca ttcgctgaaa gtggaatgtc
     6901 tccacggaga acactttatc agccgggaaa taatgcgggc aacagtgttt aattatatcg
     6961 aatgtgatta caatcgctgg cgacggcaca gttggtgtgg cggcctcagt ccggaacaat
     7021 ttgaaaacca gaacctcgct taggcctgtg tccatattac gtgggtagga tcacttacgc
     7081 cctgtggttg aaacgtgagc atattgtttt cagatgctgt tgtcttgctt cagagtgatc
     7141 tgtcctccgg atttacgcaa agttatccac aggcactgtg catttaaaaa acttatcttt
     7201 tcttcttgat tttaaaaact cagatcgtca tatcattatg ataaacataa taaaaaactc
     7261 taaacatgag aaggttttta acgtaaggtg agaggatttt taagtgtatc catagattaa
     7321 aaatgacaat gcctccaatt agttgaatta ggggttataa tacccgcttt taaggttctt
     7381 tcatggtcac agttaacttt cattgccccc gttgccagtc cgttcaggtt taccgtcacg
     7441 ggcagaaccc aaaaggacat gatcgattcc gttgccgtga ctgtcaccgg gtgtttcagc
     7501 tcacttactg ttacgaggcc cgtaaaccgg gagttaaaaa ccaaatcact gaaatggctt
     7561 tcaacggtgc cggagttcgc gatactgccc gtacgctgaa aatcggcatc aataccgtca
     7621 tacggacatt aaaaagctcc cgccccggcg gataacatct gcgccagtcg ctcacgctga
     7681 tgttgccctt atctgtgaac ttgatgggca gtggagcttc gttggcagca aggcgcaaca
     7741 aca
//
LOCUS       DAJVTL010000173         7674 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.175, whole genome shotgun sequence.
ACCESSION   DAJVTL010000173 DAJVTL010000000
VERSION     DAJVTL010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7674
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.175"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..444
                     /locus_tag="OQQ26_003883"
     CDS             <1..444
                     /locus_tag="OQQ26_003883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1859168.1"
                     /translation="PAIDALKSQAEMTMLGKQHSVEVKQREYGRSTVHKCTFVFSPQV
                     IKQRQFSGPHYKVDSIRESWTSILKRAGLKHRKSYQSRHTYACWSLAAGANPSFIASQ
                     MGHTNAQMVFNVYGAWMKDNNHEQIELLNRRLSESVPCMPHKKAG"
     gene            465..1091
                     /locus_tag="OQQ26_003884"
     CDS             465..1091
                     /locus_tag="OQQ26_003884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HCS1859169.1"
                     /translation="MGLPLIPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIK
                     RWIDNGVQVSKVKMLLSNENVDVQNGWRGQDYPAQTLTTHLFIPLRRRLQCQQPTLQA
                     LLAILDGVLINYIVICLASARKKQGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVL
                     AHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFPLGI"
     gene            1151..1258
                     /locus_tag="OQQ26_003885"
     CDS             1151..1258
                     /locus_tag="OQQ26_003885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HCS1859170.1"
                     /translation="MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG"
     gene            complement(1239..1970)
                     /gene="yehW"
                     /locus_tag="OQQ26_003886"
     CDS             complement(1239..1970)
                     /gene="yehW"
                     /locus_tag="OQQ26_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehW"
                     /protein_id="HCS1859171.1"
                     /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFVALFPQLPRPVYQQE
                     SFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLR
                     KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
                     LVALAAIIADRLFERLVQALSQHAK"
     gene            complement(1975..2901)
                     /gene="yehX"
                     /locus_tag="OQQ26_003887"
     CDS             complement(1975..2901)
                     /gene="yehX"
                     /locus_tag="OQQ26_003887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter ATP binding
                     protein YehX"
                     /protein_id="HCS1859172.1"
                     /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
                     QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
                     PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
                     PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVRREERAEGEALAEEMTLRDALS
                     LFVARGCEVLPVVNTQGQPCGTLHFQDLLEEA"
     gene            complement(2894..4051)
                     /gene="yehY"
                     /locus_tag="OQQ26_003888"
     CDS             complement(2894..4051)
                     /gene="yehY"
                     /locus_tag="OQQ26_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehY"
                     /protein_id="HCS1859173.1"
                     /translation="MTYLRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL
                     WPQTIWMLVGVGCAWLTACFIPAKKGSIFALILAQFVFVLLVWGAGKAATQLAQNGSA
                     LARTSLGSGFWLAAALVLLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGMLNDL
                     SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV
                     IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
                     GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG
                     AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND"
     gene            complement(4058..4975)
                     /gene="osmF"
                     /locus_tag="OQQ26_003889"
     CDS             complement(4058..4975)
                     /gene="osmF"
                     /locus_tag="OQQ26_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein OsmF"
                     /protein_id="HCS1859174.1"
                     /translation="MPLSKVWVGSLVLLAAVSLPLHAASPVKVGSKIDTEGALLGNII
                     LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAG
                     QGYEKVKKLDAEQNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLKEGGTF
                     KLAASAEFIERADALPAFEKAYDFKLDQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMA
                     YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTL
                     QQLNASIAVEGLDAKKVAADYLKQKGWTK"
     gene            complement(5227..7524)
                     /gene="bglX"
                     /locus_tag="OQQ26_003890"
     CDS             complement(5227..7524)
                     /gene="bglX"
                     /locus_tag="OQQ26_003890"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HCS1859175.1"
                     /translation="MKWLCSVGIAVGLALQPALADDLFGNHPLTPEARDAFVTELLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
                     KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS
                     GKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR
                     ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAV
                     GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAV
                     VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP
                     NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNIGKRE
                     GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGTDSARVKKGEFELL"
BASE COUNT         1862 a         2206 c         1905 g         1701 t
ORIGIN      
        1 ccagctattg atgctcttaa aagccaagcg gaaatgacca tgcttggaaa acagcattct
       61 gtagaggtaa agcagaggga atatgggaga agtactgtgc ataaatgcac ttttgttttt
      121 agtcctcagg taataaaaca gcggcagttt tccggaccgc actataaggt tgactccatc
      181 agggagtcat ggacaagtat cttaaaacgc gcaggtctga aacacagaaa atcgtatcaa
      241 tccaggcata cctatgcatg ctggtcactt gccgcaggag ctaatcctag ttttatcgca
      301 agccagatgg gccacacaaa cgcacaaatg gtattcaatg tttacggagc atggatgaaa
      361 gacaacaatc acgaacagat agaacttctt aacagaagac tatctgaaag tgtcccatgc
      421 atgccccata agaaagcggg gtaaaataaa aacttgcaaa atcaattggt ttacctttaa
      481 tccctgtcac gttacgcgcg tggcagaggc gttacggatt gctgaaaccg caacggacag
      541 acggcggtca tcggctgttc aacgatgccg atattgaccg gatccgcgag atcaaacgct
      601 ggatcgacaa cggcgtgcag gtcagcaaag ttaaaatgct gctcagtaat gaaaatgttg
      661 atgtgcagaa cggctggcgc ggtcaggatt accccgccca gacactcacc acacatctgt
      721 ttattcctct gcgccgacgg cttcagtgcc aacaaccgac tctccaggcg ctgctggcga
      781 tcctcgacgg cgtactgatc aactacatcg tcatttgtct ggcttcggca cgtaaaaaac
      841 agggtaaaga tgcgctggtg gttggctgga atattcagga taccacccgt ctgtggctgg
      901 agggctggat tgccagtcaa caaggatggc gcattgatgt cctcgcccac tcgctcaatc
      961 aactacgccc tgaactattc gaaggccgta cattgctggt gtggtgcggt gaaaatcgaa
     1021 cctccgccca acagcaacaa ctcaccagtt ggcaggaaca aggccatgat attttcccac
     1081 tcggcattta atgattcgtt aacaaatgcg ctttactgta caatcctttc gttaacataa
     1141 ggagtgcatt atgcgcatag ctaaaattgg ggtcatcgcc ctgttcctgt ttatggcgtt
     1201 aggcggaatt ggtggcgtca tgctcgcagg ttataccttt attttgcgtg ctggctaagc
     1261 gcctgcacca gcctttcaaa caggcggtct gcgatgatcg ccgccagtgc caccagtaac
     1321 gccccctgga tcacatacgc ggtattaaat ccgctaagcc cgatgatgat gggcgtaccc
     1381 agcgtgctgg cccctaccgt tgaggcgatc gtcgccgtac caatgttgat aatcaccgaa
     1441 gttcgcacgc ccgccagaat caccggagcc gccagcggta gctcgacctt acgcagtcgc
     1501 tgaccacgac tcattcccat acctttcgca acttctgtca cgctggcatc aatcgctccc
     1561 agcccggcaa gtgtcgcctg caggacgggc agcacaccgt aaaggatcaa ggcgataatc
     1621 gctggttgca gaccaaagcc gatcaccgga acggcaatcg ccagcactgc gacaggcgga
     1681 aaagtctgtc caacggcggc aatagtttcc accagtgggc gaaattccgc gccccacggg
     1741 cgagtgacag caattccggc accagtgcca atgatcaccg caaacaaact cgaaattccc
     1801 accagccaga aatgagccag tgccagagct gcaaaacttt cttgctgata aacgggtcgt
     1861 ggcagttgtg ggaacaaggc aacaaaaagc ggctggctgt aaggtagcca gaaaatcagc
     1921 gccacaaaca gagcaatgag ccagaacagc ggatcgcgca acatcttcat acgcttacgc
     1981 ctcctccagc agatcctgaa aatgcagcgt gccgcaaggc tggccctgcg tgttcaccac
     2041 cggcagcacc tcgcatcccc gcgcgacaaa cagggagagc gcatcgcgta gcgtcatctc
     2101 ttctgccagt gcctcacctt ctgcccgttc ttcgcgacgc acgtaatccg ccacactacg
     2161 taacgaaagc aggcgcacac ccagttcgct gcgcccaaaa aactggcgga caaaatcgtt
     2221 tgccggacga gtcagcatcg tcagcggatt gccctgctgc accacttcac cgtgatccat
     2281 caataccaga tgttctgcca gccgtagcgc ctcatcaata tcatgagtga ccagcacaat
     2341 ggtacgcccc agcaaacggt gaatgcgcgt catctcttgt tgcaacgcgc cgcgcgttac
     2401 cgggtccagt gcgccaaaag gttcatccat cagtaagact tgcggatcgg cagccagtgc
     2461 gcgcgccact cccacacgtt gctgctgacc accggaaagc tgatgcggat aacgctcacg
     2521 taaatttgac tccagcccca gtagcgccat taattcgtcg atacgatcgt caatcctcgc
     2581 ccgcgaccat ttttgtaatt gcggcacggt agcgatgttt tgcgccacgc tccagtgggg
     2641 gaacaggcca atagattgaa tggcatagcc catccggcgg cgcaactcca gtactggcag
     2701 cgagcgaatt tcttctccgg caaagcggat cactccgctg tcatgctcca ccaggcggtt
     2761 aatcattttc agggtggtgg atttgccgga gccagatgtg ccaatcagca ccgaaaaact
     2821 cccttcctga aaattgagat tgagatcgtt aacggctttt tgtgcgccga acagtttgct
     2881 gacatggcta aattcaatca ttacgtttca ccttcagcag tgcgataagc aaatcgaaca
     2941 gcgcgtcggt aagcaccgcc agaacaatta ccgggatcac ccccagcaac actaaatcaa
     3001 tggcgctgct tagcagcccc tggaaaacca gcgcaccaaa accgcctgcg ccgattaacg
     3061 ccgcaatcac cgccatacct acagtttgca ccatcaccac ccgcaggctg cgcagaaata
     3121 ccggtaacgc cagtggtaac tgaacatgca ggaatcgctg cgccccgctc atgcccatcg
     3181 ctctggcgct ctccagcaca tcgcgcggga tctggttcaa accgactacc acgccgcgca
     3241 ccagcggcag caaggcatag agcaccagcg caatcagtgc gggtgtcatt ccggttcctg
     3301 ctatgccgag cttccccagc cacggaaagg ccgtaaccag cgcggcaagc ggcgcaatca
     3361 acaggccaaa gagcgccacc gaaggcacgg tctgaatgac attgagcaga gaaaaaattg
     3421 ccccctgccg cgcagtggaa aagtagcacc agatgcccaa cggcacacca atcactaacg
     3481 caggcagcac cgcaccaaac agcaacgtca gatgttgtgc cagcgcgtcg tcaaacacat
     3541 cctgacggtt ggcgtattct ttcattagtg agagatcgtt aagcatgccg gagtacagca
     3601 accacagcgg aataatggca atctgcatat gcaacaacca gcgccacagc ggatgcgtgg
     3661 agattcggcg gatggcatca ctacaggcca gcaataccag cgccgcggcc agccagaaac
     3721 cactgccgag gctggtacgc gccagcgcac tgccattttg cgccagttgg gtcgccgcct
     3781 ttcctgctcc ccacaccagc aatacgaaga cgaattgcgc cagaatgagt gcaaaaatgc
     3841 tgcctttttt agcgggaata aaacaggctg tcagccaggc gcaaccaacg cccaccagca
     3901 tccagatcgt ttgcggccac agttgccaga gatgacgccc ttcacccgag actaaacgat
     3961 taggcgcgta actgataaac ggcagcgccg ctgcgattgc cgtcagcaac agcagcagcg
     4021 ccagaacagg attaatacgt agataagtca cgggaaatta cttcgtccac cctttttgtt
     4081 tcaggtagtc ggcagccact tttttggcat ccagtccttc cactgcaatg ctggcattca
     4141 gttgctgcaa tgtttttgca tcgaggctgg cgaagactgg ctgtagccac tgtgccattt
     4201 gcggatactc cttcaacacc gattcacgca ccactggtgc aggcgcgtag ataggttgca
     4261 cgccttgcgg atcgcttaag gtttgcagcc ccagcgccgc gaccggaccg tcagtgccgt
     4321 aagccattgc ggcattaacg ccagaagttt gctgggcagc ggctttaatc gtcaccgccg
     4381 tgtctccacc agccagtgac agcaactgat cctgatcgag tttaaagtcg taggcttttt
     4441 caaacgcggg taacgcatcg gcgcgttcga taaactctgc cgaggctgcc agtttgaagg
     4501 tgccgccctc tttcagataa cgactcaggt cagcaagcga agtgagtttg tttttctctg
     4561 ccacatcctg acgcacggcg atggtccagg tgttattcgc tggtgcgggc gtcagccaga
     4621 ttaacttgtt ttgctctgca tcgagttttt tgactttctc gtagccctgc ccggcatttt
     4681 tccacgctgc atcgttttca tctttaaaga aaaacgcgcc attgccggta tattccggat
     4741 agatatccag ttcaccggaa gtaatcgccc cgcgcaccac aggagtcgtt ccaagttgca
     4801 ctttattgac cgttggtact ccgtggcttt cgagtacttg caaaatgata ttgccgagca
     4861 gcgcgccttc ggtatcgatt tttgaaccga ctttaacggg ggaagccgcg tgcagcggca
     4921 ggctcacggc tgccaacaaa accagtgaac ctacccagac ctttgagagt ggcatgatgc
     4981 tttcctcatt cttttactgt tgttttcagc gaattaagag aaaagcatag ttgataatgg
     5041 cggggttagc ctgagcgaaa ggattcagtt gcagaatcag ataaatactt aagaggcata
     5101 ttcggtccgg cgtttcctgc cggatgcggc gcgagcgcct tatccggcct acaaagggcg
     5161 aaaattcagc aagttaagat atgaacatca ggcaaagggc gcaaacgtcg cgcccttact
     5221 aaagcattac agcaactcaa actcgccttt cttaacgcgt gcggaatcag tgccgataaa
     5281 tacattgaac ttgccaggct cggcgtcata tttcatctgt tgattccaga acttcagcgc
     5341 ctcaatatcg atcgggaagc tgacagtctg agtttcgccc ggtttcaggg tgattttctc
     5401 aaagcctttc agctgtttca cagggcgact catggaagcc gtcacatcct gcaagtacat
     5461 ctgcactacc gtggccccct cgcgcttacc gatgttcgtc acctgcacgc tggccgtcac
     5521 tttgccgtca cgcttcatgg tcggcgcaga aagtttcaca tcagagacgg tgaaagtggt
     5581 atagctcaga ccatagccga acggataaag cgccccgtta gcttcatcaa aataacgcga
     5641 agtgtatttg ttcggcttgt cggcattata cggacgaccg gtgttcagat ggctgtagta
     5701 caccgggatc tgcccgacag aacgcgggaa ggacatcggc agcttgccgg acgggttgta
     5761 atcgccaaac aatacatcgg caattgcatt accgccttca gtccccgcaa accaggtttc
     5821 cagaatcgca tcagcctgct gatcttcttt caccagcgcc agcggacgcc cgttcatcag
     5881 caccagcacc agcggtttac cggtggcttt cagcgccgca atcaagtcac gttggctttg
     5941 cggaatagtg atatcggtac ggctggaagc ctcgtgcgcc atcccctgag cttcaccgac
     6001 cacagccacc accacatcag attgtttcgc ggtttgcacc gcttcatcaa tcatctcttg
     6061 cggcgaacgc ggatcgactt tgaccgcctc ttcatactga ttcaggaaat cgataatgcc
     6121 tttgtcactg gtaacgttcg cccctttggc atacagcact ttaccgtttt caccgacggc
     6181 atttttaatc ccggtcagta cggtcacgga ttgatcggca acaccggctg cggaccagct
     6241 gcccatcacg tcacgtttac tgtccgccag tggcccaacc accgcaatgg tggccgattt
     6301 tttcagcggt aacgtttcga gacggttttt cagcaacacc aggctttcgc gcgccacttc
     6361 acgcgcttct ttacggtgca ggcggctttc ggcattggta tccaccgggt cagactcttt
     6421 cggccccaaa tggctgtatg ggtcgttaaa caatcccata tcatatttaa cgttcagtac
     6481 atggcgggca gcatcgtcca gctcttccat cgtcactttg ccggatttga tcaacccagg
     6541 cagatacttc gagtaatact cgtcgctcat actcatgttg attccggatt tcagcgccac
     6601 gcgcaccgca tcttccgggt ctgccgccgt gccatgttta atcagctctt tgattgcacc
     6661 gtgatcggaa acggtgatgc ctttaaagcc ccactggtcg cgcagaacat ctttcagcag
     6721 ccaggaatcg gaggtggctg gcgtgccgtt cagcgagttc agcgccacca tcaccgcgcc
     6781 gctgcctgcg tccagccccg ctttgtacgg cggcatataa tcattaaaca ggcgctgcgg
     6841 actcatatcg acggtgttgt actctttacc gccttctacc gcgccgtatg cggcaaagtg
     6901 tttgacgctg gtcatcaccg agtagcgatc tgccgggctt ttaccctgca tcgcttccac
     6961 catggtttta cccattgttg aggtgagata cgtatcttcg ccaaaacctt cggaagcacg
     7021 tccccagcgc ggatcgcgcg agacatcgac catcggtgcc caggtcatat tcaggccatc
     7081 atctgccgct tcataagcag agacacgtcc gaccgttttc actgcatcaa ggttaaaaga
     7141 cgaggccaga ccgaggctaa tcgggaacac cgtgcgctga ccgtgcagca cgtcgtaagc
     7201 aaagaaaaga ggaattttca ggcggcttaa ttccatcacc tgatcctgca tggcgcggat
     7261 atcctgacgg gttacggtgt tgaaaatcgc cccaacctga ccgtctttga tcatctcgcg
     7321 gatcgcctct ttcgggttat ccgggccgac gctgattaag cgcaactgac caattttctc
     7381 atcaactgtc attttcttaa gcagttcggt gacgaacgca tcccgcgctt cgggcgttaa
     7441 tggatggttg ccgaataaat catccgccag tgctggctgc agggccagac ccaccgcgat
     7501 tcctactgaa catagccatt tcatatggat ttttcttcct ctgttgcccg acgaggcagc
     7561 gaaaatggtg caaaaaccgt agtttgccat aagcatgatg gagagagaaa aagaatgctc
     7621 agtttattgt ctgaattttc aaaatattca ctcgctgaat tgtcatacaa ggcg
//
LOCUS       DAJVTL010000174         7617 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.176, whole genome shotgun sequence.
ACCESSION   DAJVTL010000174 DAJVTL010000000
VERSION     DAJVTL010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7617
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.176"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..278)
                     /locus_tag="OQQ26_003891"
     CDS             complement(<1..278)
                     /locus_tag="OQQ26_003891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1859176.1"
                     /translation="MPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQA"
     gene            937..1026
                     /gene="leuL"
                     /locus_tag="OQQ26_003892"
     CDS             937..1026
                     /gene="leuL"
                     /locus_tag="OQQ26_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HCS1859177.1"
                     /translation="MTHIVRFIGLLLLLNASSLRGRRVSGIQH"
     gene            1119..2690
                     /gene="leuA"
                     /locus_tag="OQQ26_003893"
     CDS             1119..2690
                     /gene="leuA"
                     /locus_tag="OQQ26_003893"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HCS1859178.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN
                     AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
                     LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNIELVKYS
                     LTAKGHGKDAQGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQHNENNKETV"
     gene            2690..3781
                     /gene="leuB"
                     /locus_tag="OQQ26_003894"
     CDS             2690..3781
                     /gene="leuB"
                     /locus_tag="OQQ26_003894"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HCS1859179.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLNAVRNRFAMRITTSHYD
                     VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
                     FGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEGI
                     RTGDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            3784..5184
                     /gene="leuC"
                     /locus_tag="OQQ26_003895"
     CDS             3784..5184
                     /gene="leuC"
                     /locus_tag="OQQ26_003895"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HCS1859180.1"
                     /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
                     RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
                     VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
                     TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLD
                     KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
                     AAAAVTGHFADIRNIK"
     gene            5195..5800
                     /gene="leuD"
                     /locus_tag="OQQ26_003896"
     CDS             5195..5800
                     /gene="leuD"
                     /locus_tag="OQQ26_003896"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HCS1859181.1"
                     /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
                     RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN"
     gene            complement(5849..6822)
                     /locus_tag="OQQ26_003897"
                     /pseudo
     CDS             complement(5849..6822)
                     /locus_tag="OQQ26_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025293.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(6924..7055)
                     /gene="sgrT"
                     /locus_tag="OQQ26_003898"
     CDS             complement(6924..7055)
                     /gene="sgrT"
                     /locus_tag="OQQ26_003898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HCS1859182.1"
                     /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES"
     gene            7144..>7617
                     /gene="sgrR"
                     /locus_tag="OQQ26_003899"
     CDS             7144..>7617
                     /gene="sgrR"
                     /locus_tag="OQQ26_003899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SgrR"
                     /protein_id="HCS1859183.1"
                     /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
                     NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
                     VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRIN"
BASE COUNT         2025 a         2004 c         1885 g         1703 t
ORIGIN      
        1 aatgcctgac gaactgagcc aaaaagttga aatgcgcgag cagtcggttg aataccacgg
       61 ccataacgaa caaaaagctc gtcattaaac atcaccttca ggcgtgcaac agcgttactg
      121 accgcaggtt gcgacatacc cagaacatga gcggcacggg taatgttttg ctcctgcatc
      181 acggcatcga aaacggttaa taagttgaga tcgaccatgc gtagctgtgg cttgcttaac
      241 tccgccgtct ctgaatgatc tgtttgtacc tctggcatac ttaactccac tgtcacactt
      301 aactcccttt cccttattgg aatgcagaga aataatcctg aagaatatga tttatcatgc
      361 atataaaata agaaaaagca aaatgagtaa aattcggaaa acataaagat acgggttctg
      421 ataaaaacag aatccattgc cgtggaatga gtcatttacc acagcataat aatccataat
      481 gtttttgttg cgaaaacaat ctaatcataa ctaccgcgaa tactcaatca tctacaaaat
      541 ggattaaatg tgcttattta ataattaatt tatatattta atgcattaat tcttaacatt
      601 aattgatcaa taatattcac caaatcaata tcaaaaaaat cgcaaaacat ataattcaat
      661 acaaatcatc aggataggtt ttgcaacgcg tgcattttgt cccctttttc ctcgttgatt
      721 agatgcaaaa atttatgctg aaatatgtca accgatgaaa agcgtcggta gttaagcaga
      781 aattaatatc gcttacttta accaccgcag cacaattagc taattttacg gatgcagaac
      841 tcaccctggc gggacgtttt tattgcgtca gggttgacat ccgtttttgt atccagtaac
      901 tctaaaagca tatcgcattc atctggagct gatttaatga ctcacatcgt tcgctttatc
      961 ggtctactac tactactaaa cgcatcttct ttgcgcggta gacgagtgag cggcatccag
     1021 cattaagcca gcacgcagtc aaacaaaaaa cccgcgccat tgcgcgggtt tttttatgcc
     1081 cgaagcgagg cgctctaaaa gagacaagga cccaaaccat gagccagcaa gtcattattt
     1141 tcgataccac attgcgcgac ggtgaacagg cattacaggc aagcttgagt gtgaaagaaa
     1201 aactgcaaat tgcgctggcc cttgagcgta tgggtgttga cgtgatggaa gtcggtttcc
     1261 ccgtctcttc gccgggcgat tttgaatcgg tgcaaaccat cgcccgccag gttaaaaaca
     1321 gccgcgtatg tgcgttagct cgctgcgtgg aaaaagatat cgacgtggcg gccgaatccc
     1381 tgaaagtcgc cgaagccttc cgtattcata cctttattgc tacctcccca atgcacatcg
     1441 ccaccaagct gcgcagcacc ctggacgagg tgatcgaacg cgctatctat atggtgaaac
     1501 gcgcccgtaa ttacaccgat gatgttgaat tttcttgcga agatgccggg cgtacaccca
     1561 ttgccgatct ggcgcgagtg gtcgaagcgg cgattaatgc cggtgccacc accatcaaca
     1621 ttccggacac cgtgggctac accatgccgt ttgagttcgc cggaatcatc agcggcctgt
     1681 atgaacgcgt acctaacatc gacaaagcca ttatttccgt acatacccac gacgatttag
     1741 gcctggcggt cggcaactca ctggcggcgg tacatgccgg tgcacgccag gtggaaggtg
     1801 caatgaacgg gatcggcgag cgtgccggta actgttcgct ggaagaagtc atcatggcga
     1861 ttaaagttcg taaggatatt ctcaacgtcc acaccgccat taatcaccag gagatatggc
     1921 gcaccagcca gttagttagc cagatttgta atatgccgat cccggcaaac aaagccattg
     1981 ttggcagcgg cgcattcgct cactcctccg gtatccacca ggatggcgtg ctgaaaaacc
     2041 gcgaaaacta cgaaatcatg acaccagaat ctattggtct gaaccaaatc cagctgaatc
     2101 tgacctctcg ttcggggcgt gcggcggtga aacatcgcat ggatgagatg gggtataaag
     2161 aaagtgaata taatttagac aatttgtacg atgctttcct gaagctggcg gacaaaaaag
     2221 gtcaggtgtt tgattacgat ctggaggcgc tggccttcat cggtaagcag caagaagagc
     2281 cggagcattt ccgtctggat tacttcagcg tgcagtctgg ctctaacgat atcgccaccg
     2341 ccgccgtcaa actggcctgt ggcgaagaag tcaaagcaga agccgccaac ggtaacggtc
     2401 cggtcgatgc cgtctatcag gcaattaacc gcatcactga ctataacatc gaactggtga
     2461 aatacagcct gaccgccaaa ggtcacggta aagatgcgca gggtcaggtg gatattgtcg
     2521 ccaactacaa cggtcgccgc ttccacggcg tcggcctggc caccgatatt gtcgagtcct
     2581 ccgccaaagc catggtgcac gtactgaaca atatctggcg tgccgcagaa gtcgaaaaag
     2641 agttgcaacg caaagctcaa cacaacgaaa acaacaagga aaccgtgtga tgtcgaagaa
     2701 ttaccatatt gccgtattgc cgggggacgg tattggtccg gaagtgatga cccaggcgct
     2761 gaaagtgctg aatgccgtgc gcaaccgctt tgcgatgcgc atcaccacca gccattacga
     2821 tgtaggcggc gcagccattg ataaccacgg gcaaccactg ccgcctgcga cggttgaagg
     2881 ttgtgagcaa gccgatgccg tgctgtttgg ctcggtaggc ggcccgaagt gggaacattt
     2941 accaccagac cagcaaccag aacgcggcgc gctgctgcct ctgcgtaagc acttcaaatt
     3001 attcagcaac ctgcgtccgg caaaactgta tcaggggctg gaagcattct gtccgctgcg
     3061 tgcagacatt gccgctaacg gcttcgacat cctgtgcgtg cgcgaactga ccggcggcat
     3121 ctatttcggt cagccaaaag gccgcgaagg tagcggacaa tatgaaaaag cgtttgatac
     3181 cgaggtgtat caccgttttg agatcgagcg tattgcccgc atcgcgtttg aatctgctcg
     3241 taaacgtcgc cacaaagtca cctcaatcga caaagctaac gtgctgcaat cctctatttt
     3301 atggcgtgaa atcgtcaacg agatcgccac ggaatacccg gatgtcgaac tggcgcatat
     3361 gtacatcgac aacgccacca tgcagctgat taaagatcca tcacagtttg acgttctgct
     3421 gtgctccaac ctgtttggcg acattctgtc tgacgagtgc gcaatgatca ctggctcgat
     3481 ggggatgttg ccttccgcca gcctgaacga gcaaggtttt ggactgtatg aaccggcggg
     3541 cggctcggca ccagatatcg caggcaaaaa catcgccaac ccgattgcac aaatcctgtc
     3601 gctggcactg ctgctgcgtt acagcctgga tgccgatgat gcggcttccg ccattgaacg
     3661 cgccattaac cgcgcattag aagaaggcat tcgcaccggg gatttagccc gtggcgctgc
     3721 cgccgttagt accgatgaaa tgggcgatat cattgcccgc tatgtggcag aaggggtgta
     3781 atcatggcta aaacgttata cgaaaaatta ttcgacgctc acgtagtgta cgaagccgaa
     3841 aacgaaaccc cgctgttata tatcgaccgc cacctggtgc atgaagtgac ctcaccgcag
     3901 gcgttcgatg gtctgcgcgc ccacggtcgc ccggtacgtc agccgggcaa aaccttcgcc
     3961 actatggatc acaacgtctc tacccagacc aaagacatta atgcctgtgg tgaaatggcg
     4021 cgcatccaga tgcaggagct gattaaaaac tgcaaagaat ttggcgtcga gctgtatgac
     4081 ctgaatcacc cgtatcaggg gatcgtccac gtaatggggc cggaacaggg cgtcaccttg
     4141 ccggggatga ccattgtctg cggcgactcg cataccgcca cccacggcgc gtttggcgca
     4201 ctggcctttg gtatcggcac ttccgaagtt gaacacgtac tggcaacaca aaccctgaaa
     4261 cagggccgtg cgaagaccat gaaaattgaa gtccagggca aagccgcgcc gggcattacc
     4321 gcaaaagata tcgtgctggc aattatcggt aaaactggca gcgcaggcgg caccgggcat
     4381 gtggtggagt tttgcggcga agcaattcgt gatttaagca tggaaggtcg tatgaccctg
     4441 tgcaatatgg cgatcgaaat gggcgcaaaa gccggtctgg ttgctcctga cgaaaccacc
     4501 tttaactatg tcaaaggccg tctgcatgcg ccgaaaggca aagatttcga cgatgccgtt
     4561 gcctactgga aaaccctgca aaccgacgaa ggcgcaactt tcgataccgt tgtcactctg
     4621 caagcagaag aaatttcacc gcaggtcacc tggggcacca atcccggcca ggtgatttcc
     4681 gtgaacgaca atattcccga tccggcttcg tttgccgatc cggttgaacg tgcgtcggca
     4741 gaaaaagcgc tggcctatat ggggctgaaa ccgggtattc cgctgaccga agtggctatc
     4801 gacaaagtgt ttatcggttc ctgtaccaac tcgcgcattg aagatttacg cgcggcagcg
     4861 gagatcgcca aagggcgaaa agtcgcgcca ggcgtgcagg cactggtggt tcccggctct
     4921 ggcccggtaa aagcccaggc ggaagcggaa ggtctggata aaatctttat tgaagccggt
     4981 tttgaatggc gcttgcctgg ctgctcaatg tgtctggcga tgaacaacga ccgtctgaat
     5041 ccgggcgaac gttgtgcatc caccagcaac cgtaactttg aaggccgcca ggggcgcggc
     5101 gggcgcacgc atctggtcag cccggcaatg gctgccgctg ctgctgtgac cggacatttc
     5161 gccgacattc gcaacattaa ataaggagca caccatggca gagaaattta tcaaacacac
     5221 aggcctggtg gttccgctgg atgccgccaa tgtcgatacc gatgcaatca tcccgaaaca
     5281 gtttttgcag aaagtgaccc gtacgggttt tggcgcgcat ctgtttaacg actggcgttt
     5341 tctggatgaa aaaggccaac agccaaaccc ggacttcgtg ctgaacttcc cgcagtatca
     5401 gggcgcttcc attttgctgg cacgagaaaa cttcggctgt ggctcctcgc gtgagcacgc
     5461 gccctgggca ttgaccgact acggttttaa agtggtgatt gcgccgagtt ttgctgacat
     5521 cttctacggc aatagcttta acaaccagct gctgccggtg aaattaagcg atgcagaagt
     5581 ggacgaactg tttgcgctgg tgaaagccaa tccggggatc catttcgacg tggatctgga
     5641 agcgcaagag gtgaaagcgg gagagaaaac ctatcgcttt accatcgatg ccttccgccg
     5701 ccactgcatg atgaacggtc tggacagtat tgggcttacc ttacagcacg acgacgccat
     5761 tgccgcttat gaagcaaaac aacctgcgtt tatgaattaa tccccttgcc cggtcaaatg
     5821 accgggcttt ccgctatcgt ccacgtcatc aaacgtcttt aacctttgcg gttaaaaata
     5881 atgcgacaac agaaataacc gcaattaccc agtagacagc aaagtgcccc caactttgtg
     5941 caattgctcc ctgaataacg ccagccagaa ttaccccggt agaaatactg ttagtaaata
     6001 aggtggtagc tgcccccgct cttccaggca ttaaatcctg aaaccatagc atcccaatac
     6061 ccgcaacaat gccgataaat acagcgttaa aaagttgcag cgtcatcaac gccagacggc
     6121 tatgaaataa aatcaatccg gtgtaaaaca gtactcctgc cgccactgct atgaccatca
     6181 ttcgccgctt accataacgt ttgacatagt agccagccag aatcattgct ggtatttcca
     6241 gtccagctgc cgtccccatc aggaaacccg ccagtttgtc tggcaatcct aactcgctac
     6301 tgatccacaa cggcatatca ataatgtaca tggtgttgca ggtccacatt aacgtcgagg
     6361 cgacaaataa catccgtaca ttactatcct gccagccacc ttgcattgat aaagcatttt
     6421 ccgacggcag ttctacccgc gccagagcaa ataactatgg cattgccgta ttggccagag
     6481 atgccagaag cacaccacag gtgataagcg tcagataatg acgattaaat gcaaacaata
     6541 gcgcattgcc gatagccatc aaacagcaaa atataatcag ttttcgccga tcgccctgac
     6601 tgtcagaacg ttttgccaac cagaggctta cgccgatccc agcaatagca ttcaccgtat
     6661 aaaagagtcc gatccagaaa ggttgcgcgc caacctcacg actcagaaat aagctcaatg
     6721 taggagcctg tagcgccccg gcccccccat cataaaagcg accagcataa atgccgcgta
     6781 aacaccgttc atacggcgag ccatcgtcat tatccagatc atacgttccc tttttagcgc
     6841 ggcgagaata aaaaaaacca gcaggtataa tctgctggcg ggtgatttta caccaatact
     6901 cagtcacaca tgatgcaggc aagtcaactt tcagaattgc ggtcatccca ctgcatcagt
     6961 ccttcaagca tggttaatcg ttgtgggacg cttaaccaac gcaaccagca caacttcgct
     7021 gtcgcggtaa aatagtgctg ataaaactga cgcatggggc acctccttgc ttcatcgtta
     7081 gaaattattg acttaatata gggaaaataa aattgctgtc ttttgcgcag gagttcccct
     7141 tttatgccat ctgctcgtct gcaacaacag ttcatccgcc tgtggcaatg ctgcgagggt
     7201 aaatcgcagg acacaacgct caacgaactg gcagcgttat tgagctgctc gcgtcgtcat
     7261 atgcgtaccc tgctcaacac catgcaggat cgcggctggc tgacgtggga agcggaagtc
     7321 gggcgcggta aacgctcgcg tctgacattc ctctataccg ggctggcgct tcagcaacag
     7381 cgggcggaag acctgctgga gcaggatcgt atcgaccaac tagtgcagtt ggttggcgac
     7441 aaagcgactg tgcggcaaat gctggtttct catctgggcc gcagcttccg ccaggggcgg
     7501 cacatcctgc gcgtgctcta ctatcgtccg ttgcgtaatc tgctacctgg cagcgcattg
     7561 cgccgttccg aaacccatat tgcccggcaa atcttcagtt cgctaacgcg cataaat
//
LOCUS       DAJVTL010000175         7454 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.177, whole genome shotgun sequence.
ACCESSION   DAJVTL010000175 DAJVTL010000000
VERSION     DAJVTL010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7454
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.177"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            36..659
                     /locus_tag="OQQ26_003900"
     CDS             36..659
                     /locus_tag="OQQ26_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000024740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HCS1859184.1"
                     /translation="MPVHLTTSSSADQGLGKLLVPGALGGLAGLLVANKSARKLLTKY
                     GTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERTERLILALVFAAK
                     SDGHIDANERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATGVRNEEEALEIYF
                     LSCAAIDIDHFMERSYLNALGDALKIPQDVREGIERDLEQQKRTLAE"
     gene            868..2928
                     /gene="ptrB"
                     /locus_tag="OQQ26_003901"
     CDS             868..2928
                     /gene="ptrB"
                     /locus_tag="OQQ26_003901"
                     /EC_number="3.4.21.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
                     /protein_id="HCS1859185.1"
                     /translation="MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQEN
                     SYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQS
                     AFSEEWDEWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNL
                     ETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYE
                     EKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLD
                     HYQHRFYLRSNRHGKNFGLYRTRMRDEQQWEELIPPRDNIMLEGFTLFTDWLVVEERQ
                     RGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETARLRYGYSSMTTPDTLFELD
                     MDTGERRVLKQTEVPGFDAANYRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVY
                     GYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDY
                     LDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTML
                     DESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWE
                     PAKWVAKLRELKTDNHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLVALAQGTLPA
                     TPAD"
     gene            complement(2925..3587)
                     /gene="exoX"
                     /locus_tag="OQQ26_003902"
     CDS             complement(2925..3587)
                     /gene="exoX"
                     /locus_tag="OQQ26_003902"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HCS1859186.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS
                     PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
                     ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
                     MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWLFNNLESMSPELRLTLKHYLE
                     NT"
     gene            complement(3611..4267)
                     /locus_tag="OQQ26_003903"
     CDS             complement(3611..4267)
                     /locus_tag="OQQ26_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HCS1859187.1"
                     /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS
                     LSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW
                     RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR
                     LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
                     "
     gene            complement(4369..4599)
                     /gene="holE"
                     /locus_tag="OQQ26_003904"
     CDS             complement(4369..4599)
                     /gene="holE"
                     /locus_tag="OQQ26_003904"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HCS1859188.1"
                     /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVERKQ
                     PEHLRSWFRERLIAHRLASVNLSRLPYEPKLK"
     gene            4738..5112
                     /gene="yobA"
                     /locus_tag="OQQ26_003905"
     CDS             4738..5112
                     /gene="yobA"
                     /locus_tag="OQQ26_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HCS1859189.1"
                     /translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAHVTAA
                     PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT
                     VDWHVVSVDGHKTKGHYTFSVK"
     gene            5116..5988
                     /gene="copD"
                     /locus_tag="OQQ26_003906"
                     /pseudo
     CDS             5116..5988
                     /gene="copD"
                     /locus_tag="OQQ26_003906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416354.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
     gene            6001..6342
                     /locus_tag="OQQ26_003907"
     CDS             6001..6342
                     /locus_tag="OQQ26_003907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HCS1859190.1"
                     /translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
                     MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNTQPISVIQIDDPNNPGEKMSL
                     APFIERAEKLC"
     gene            complement(6735..>7454)
                     /locus_tag="OQQ26_003908"
     CDS             complement(6735..>7454)
                     /locus_tag="OQQ26_003908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001189081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1859191.1"
                     /translation="TTRHIAEFLDLWIEGGKNTMAGSMRSVLSDMFREAIVEGRISQN
                     PVTPTRAPKIVVTRERLKLKTYNCIREAADQLPAWFPLAMDLALVTGQRREDITNMRF
                     SDIYDDRLHIRQIKTGMMIAIPLSLSLPVAGLRLGAVVKQCRMVSRGDYLISAGIRKN
                     SPDGSIHPDGLTKKFVAARKLTGILFSENPPTFHEIRSLAGRLYKEICGEEFAQRLLG
                     HTSEKTTKMYLDEREKTYLLL"
BASE COUNT         1874 a         1804 c         1849 g         1927 t
ORIGIN      
        1 ctgcttaaaa aaagaacaaa tggtagtgtc cgctattgcc agtacacctc actacctcct
       61 cgtctgcgga tcagggattg ggcaaactgt tagtgccagg cgcattaggc ggactggctg
      121 ggctgctggt cgcaaataaa tcagcacgta aacttcttac gaaatatggc accaacgcgt
      181 tactggttgg cggcggagcg gtagcgggta cggtgctgtg gaataaatac aaagataaaa
      241 ttcgcgcggc gcatcaggac gaaccgcagt ttggcgcgca aagtacgccg ctggatgagc
      301 gtacggaacg tttgatcctt gcgctggtct ttgccgctaa aagtgatggt catattgatg
      361 ccaatgaacg tgcggcaatc gaccagcaat tgcgtgaagc cggcgtggaa gagcaggggc
      421 gtgtactcat tgagcaggca atcgaacaac cgctggatcc acaacgcctg gctaccgggg
      481 tccgcaatga agaagaggcg ctggaaatct atttcctgag ctgcgcggct attgatattg
      541 accattttat ggaacgcagt tacctgaatg cactgggtga cgcgctgaaa atcccccagg
      601 atgttcgtga aggcattgaa cgcgatctcg aacagcaaaa acgcactttg gcggaataat
      661 tccgctctct ggatagcctg aagttgacta tttcgggcta tccagaaccg cacagccatt
      721 tgaacaggct gattttctct gtctgcataa cattcgatat ccgcgccatt acctgtcatc
      781 atctaagcaa tgacgaccct gtttcgcttg catccccggt gagttttgcc acccttataa
      841 gatgtttcaa ccagaaagaa caataaaatg ctaccaaaag ccgcccgcat tccccacgcc
      901 atgacgcttc atggcgatac gcgcatcgat aattactact ggctgcggga cgatacgcgt
      961 tctcagccag aagtcctgga ctacctgcaa caagaaaata gttacggtca tcgggtgatg
     1021 gcctcacaac aagccttgca ggatcgcatc ttaaaggaaa tcatcgaccg cattccgcaa
     1081 cgagaagttt ctgcgcccta catcaaaaat ggctaccgct atcggcatat ttatgaacca
     1141 ggctgtgaat atgctatcta ccagcgtcaa tcggcattca gtgaagagtg ggatgagtgg
     1201 gaaacattgc tcgatgccaa taagcgcgca gctcatagtg agttttattc gatgggcgga
     1261 atggcgatta cgcccgataa caccattatg gcgctggcag aagattttct ttcccgacgc
     1321 cagtacggca ttcgttttcg taatctggaa acaggtaact ggtacccgga actgctggat
     1381 aacgttgaac ccagctttgt ctgggcgaat gactcttgga ctttctacta tgttcgcaag
     1441 catccagtga ctctgctgcc ttatcaggtc tggcgtcacg ccatcggtac gccagcatcg
     1501 caagataaac tgatttacga agaaaaagac gatacctatt acgtcagcct gcataaaacg
     1561 acctcgaagc actatgtagt cattcatctg gccagcgcca ccaccagtga agttcgcctg
     1621 ctggacgcgg aaatggccga tgccgagccg tttgtttttc tgccgcgccg caaagatcac
     1681 gaatacagcc ttgatcacta ccagcatcgt ttttatctgc ggtccaaccg ccacggcaaa
     1741 aactttggct tataccgtac ccgtatgcgt gatgagcaac agtgggaaga gttaattccg
     1801 ccacgcgata acattatgct ggaagggttt acgctgttta ccgactggct ggtggttgaa
     1861 gagcgtcagc gcgggttaac cagtttgcgc caaattaacc gcaagacccg ggaagtcatt
     1921 ggcattgcct ttgatgatcc ggcctatgtg acctggattg cctataatcc agaacctgaa
     1981 accgcgcgat tgcgttatgg ttattcttcc atgaccacac cagacacttt gtttgaactg
     2041 gatatggata ccggtgagcg tcgtgtatta aaacaaacag aagtgcccgg ttttgatgcg
     2101 gcgaattacc gcagtgaaca cctgtggata gtcgcccgtg atggcgtcga agttccggtt
     2161 tcgttggtct accatcgcaa acattttcgc aaagggcaca acccgctgct ggtgtatggc
     2221 tacggttctt acggcgcaag tattgatgcc gatttcagtt ttagccgctt gagtttatta
     2281 gatcgtggat ttgtctacgc cattgtccat gttcgcggcg gcggtgagct ggggcaacaa
     2341 tggtacgaag acggtaaatt tctgaagaag aaaaatacgt ttaatgatta tcttgatgcc
     2401 tgcgatgcat tgttaaaact gggctatggc tctccttcgc tctgttatgc gatgggcgga
     2461 agtgcggggg gcatgttgat gggcgttgca attaatcaac gcccggaatt attccacggc
     2521 gttatcgccc aggtaccgtt tgttgatgtt gtaacaacga tgcttgatga atcaattcct
     2581 cttaccactg gtgagtttga agagtggggg aatccgcagg atccgcaata ttacgagtac
     2641 atgaaaagct acagcccgta tgacaacgtc accgcacagg cttatccgca tttactggta
     2701 acgaccggtt tacacgattc tcaggtgcaa tattgggaac cggcaaaatg ggtcgctaaa
     2761 ttgcgcgagc tgaaaaccga taaccatctt ttattgctct gtaccgacat ggactcaggc
     2821 catggcggta aatctggccg ctttaaatcg tacgaaggcg tagcgatgga atatgctttt
     2881 ctggtcgcgc tggcgcaggg aacattaccc gctacgcctg cggattaagt attttccaga
     2941 taatgtttca gtgttaaacg cagctccggg ctcatgcttt ccaggttatt aaataaccag
     3001 cgcagatagc ccggatcgcg ttcggcaacg tcggaaaccg ctttgccacg gtatttgcca
     3061 aaggtgaagg tcgtcatcaa cgacggacgt ccggtgatat cggccatctg ttctgccgtc
     3121 cagccggagg tgttcataat atcgataagc aacgcggcgg tgatataaca gtcatacaac
     3181 gcgcggtgat gatgcaggcc cggcggcgtc tgtacattga gcttccgtgt tttatataac
     3241 gccatattgc tgtacttgat ccctggccac aaacgacggg ccagtttcat agtgcaaatc
     3301 cactcaccgg gcatctcagg cagtacgcgg cggtcaaagc tggcgttgtg cgcgacatac
     3361 cattcactac cgtaatagtg tgggatcaca tcttcaatcc acggtttatc ggcgaccatg
     3421 gcttcggtga tgcgatgaat cgccatcgct tgtggactaa taggacgatc ggggcgcacc
     3481 aggtggctca tggggttgac gatttttccg tcaatgacat caacagaggc aatctcaacg
     3541 atccctccct gcaaaccgca ggtttctgta tcgataatgc gcaacatggc atgctccagg
     3601 ccgaaaaagc ctagcgtaat ggaatgatat cgccttgcca accctgtgat gaacgctgac
     3661 cgactaacaa taatgaacca cgatcggcgc gaacgatgag acgaccatat tcatcccata
     3721 gtgcactgtt accacgggca tttgccatca gcacggcaat cgagtactga tgtgaaaaaa
     3781 attgtaagcg acgggccgac gccagcaggt cgggttctcc cagacattgc cctgtagtaa
     3841 acagtgaaca ggtcgggtcc atatccatac cttgcggttg ttcatcgacc accgtgatgg
     3901 ttctggaacg acggcccaga catgcaccat gactctgatg gtagatccca ggcgtttttc
     3961 gccacggtgc gaacaccgca attccacgaa taaagcgatc gttatattca acgggaaggc
     4021 cggcaatgat ggtcattcgc caggtcgttg cggcataaca aagcgggtct aacagtgaga
     4081 gatcgggtgg ggcaggaagg gcacgtcgcg aataatcaca ccccagtaaa gaaagcgatg
     4141 gaaaaactaa cagctgacat tgttgcctag cggcggccct cacaaactcc agatgatgag
     4201 ctacctgttc ggtgagtgag gttttacgag gctcatattg cgctgctgca actttccaga
     4261 acgacataat gacttccttt tcaaaatgac tgcaaattat gggtgcggtt tagaaaatac
     4321 tcataattta gcaggcgtta tgtaagaaag tgtaactctg tataagtttt atttaagttt
     4381 gggctcgtaa ggtaaacgtg acagattgac cgaagccaaa cggtgggcaa taagccgctc
     4441 gcgaaaccag ctgcgcaaat gttcaggctg tttacgttca accgcttcag cgatcaccgg
     4501 catattgtag cgttctttaa atgccacccc ggccgccgcc aaatcgacat tcactttatc
     4561 catttctgtt tgatccagtt tagccagatt cttcagcatt cttaatctcc tcatcattcg
     4621 cgggcaaaag ttactaagag tgagccagga tggcaagccg gaattgatga tcctcgactc
     4681 agacattaga caaggttatg ctctgtaaaa aagttattac aaaaaggaat agataatatg
     4741 gcttcaactg cacgctccct tcgctacgcg ctggcaatcc tgaccacttc gttggtgaca
     4801 ccttccgtct gggcacatgc gcatttaacg catcagtatc ctgcggcaaa cgcgcatgtg
     4861 acagctgcac cgcaggcaat cactttaaac ttctcggaag gtgttgaaac aggattcagt
     4921 ggtgcaaaaa tcacggggcc aaaaaacgaa aatattaaaa cattaccggc gaagcgaaat
     4981 gagcaggacc aaaagcaact gattgttcca ctggccgatt cgctgaaacc cggaacctac
     5041 accgttgact ggcatgttgt ttcggtggac gggcataaaa cgaaaggaca ctacaccttt
     5101 agcgtgaaat aaatcatgct ggcgtttact tggatcgcgc tgcgatttat ccatttcacc
     5161 tcgctgatgc tggtttttgg cttcgcaatg tacggtgcct ggctggcccc cttgacgatt
     5221 cgtcgcttgc tggcgaagcg ttttctgcgt ttacaacagc acactgccgt ctggagtttg
     5281 atcagtgcca ctgcaatgct cgccgttcag ggcgggttga tgggaacggg atggacagat
     5341 gtattttcgc caaacatttg gcaggctgtt ttgcaaacgc agtttggtgg cgtctggtta
     5401 tggcaaattg ttctcgccct cgtaacgttg atcgtcgccc ttatgcaacc gcggaatatg
     5461 ccacgtttgc tgtttatgct cactaccgcg caatttattc tgctggcggg agtggggcat
     5521 gcgacgctga atgaaggggt aacggagaaa atccatcaga ctaatcacgc gattcacctg
     5581 atttgtgcgg cggcgtggtt tgggggatta ctgccggtgc tctggtgtat gcaactcatc
     5641 aaaggccgtt ggcgacacca ggctattcag gcgctgatgc gtttttcctg gtgcgggcat
     5701 tttgcggtga tcggcgtact ggcaagcggc gtgcttaatg cattgttgat taccggattt
     5761 ccccccacgc ttacgactta ctgaggccaa ctcttattgc tcaaagccat cctggtgatg
     5821 attatggtgg tcattgcgct ggctaatcgt tatgttcttg taccgcgcat gaggcaggat
     5881 gaagatcgtg cggcaccctg gtttgtgtgg atgactaaac tcgaatgggc gataggtgcg
     5941 gtagtgctgg tgatcatcag cctgcttgcg actctcgaac ctttttgatg gattatgaaa
     6001 atgatgaaaa aaagtattct ggcgtttctg ttactcacca gttctgcagc ggcgctggct
     6061 gcaccgcagg tgattaccgt cagtcgtttt gaagtgggta aagacaaatg ggcatttaac
     6121 cgcgaagagg tgatgctgac ttgccgaccg ggtaatgctt tgtatgttat taatccgagt
     6181 accctcgtgc agtatccttt aaacgatatc gcacaaaagg aagttgccag tgggaagacc
     6241 aatacccaac ccatttcggt gattcagatt gatgatccta acaatcccgg cgaaaaaatg
     6301 agtctggcac cgtttataga acgagctgaa aaactctgtt aattacctaa aatagccttt
     6361 tgattcccaa taaaaaaacc gcctcagttc tttcaccaga acgggcggtt tttaacattt
     6421 aagctgataa ccaccgcgct ttttattgac cattttgcac gcaaactgga aaacctggcg
     6481 tcgtcatcta ttcttaaagg gcaaggcaac taagcctgca ttaatgccaa cttttagcgc
     6541 acggctctct cccaagagcc atttccctgg accgaataca ggaatcgtat tcggtctttt
     6601 tttaattgca tttgaaatca attagttaca aatgcttccc cgaaattccc cgaaatttac
     6661 tcgaatttct gtattccggt cttttttggt tatatcacaa ccaaaataca tttaacaatc
     6721 catttacgtt aaaatcagag cagtaagtac gttttttctc tctcatcaag atacattttt
     6781 gttgtcttct ccgatgtgtg gccaagtaga cgctgagcaa attcttctcc acatatttct
     6841 ttgtacaatc gtccagccag gcttctgatt tcgtgaaaag ttggtgggtt ttcactgaac
     6901 aggatacctg ttaattttct ggctgcgaca aatttctttg tcaggccgtc cgggtgaatg
     6961 ctgccgtcag ggctgttttt tctaatcccg gcactgatta gataatcccc cctacttacc
     7021 atgcggcact gtttaactac tgcaccaagt cgtaaaccag cgacaggaag gctgagtgac
     7081 agggggatag caatcatcat tcctgtctta atttgcctga tgtggagacg atcatcataa
     7141 atatcactga accgcatatt cgttatgtct tcgcgacgtt gtcctgttac aagggctaag
     7201 tccatagcta atgggaacca tgccggaagt tgatctgctg cctccctgat gcagttgtat
     7261 gtctttagtt tcagccgttc tcttgtaact actattttcg gtgctcttgt tggcgttact
     7321 ggattttgag atatacgtcc ttcaacaatg gcttcgcgga acatatcaga taacacagaa
     7381 cgcattgatc ctgccatcgt gtttttccct ccttcaatcc acaaatcaag aaactcggcg
     7441 atatggcgag tggt
//
LOCUS       DAJVTL010000176         7420 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.178, whole genome shotgun sequence.
ACCESSION   DAJVTL010000176 DAJVTL010000000
VERSION     DAJVTL010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7420
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.178"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1237)
                     /gene="ascF"
                     /locus_tag="OQQ26_003909"
     CDS             complement(<1..1237)
                     /gene="ascF"
                     /locus_tag="OQQ26_003909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose/arbutin/salicin transporter
                     subunit IIBC"
                     /protein_id="HCS1859192.1"
                     /translation="MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
                     PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRI
                     GAGILDALIDTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
                     LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
                     YTVIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
                     AISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
                     IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
                     LISGFICGAVAGMAGLASHS"
     gene            1497..2507
                     /gene="ascG"
                     /locus_tag="OQQ26_003910"
     CDS             1497..2507
                     /gene="ascG"
                     /locus_tag="OQQ26_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator AscG"
                     /protein_id="HCS1859193.1"
                     /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
                     YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
                     AEEERQAIQYLLDLRCDAIMIYPRFLSVDGIDDIIDAHSQPIMVLNRRLRKNSSHSVW
                     CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSVERLAGYKDALAQHGIALNEKLIA
                     NGKWTPASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHECGVAVPEQVSVIGFD
                     DIAIAPYIVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAP
                     SR"
     gene            2656..3183
                     /gene="hydN"
                     /locus_tag="OQQ26_003911"
     CDS             2656..3183
                     /gene="hydN"
                     /locus_tag="OQQ26_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HCS1859194.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVICNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRTALMF"
     gene            3336..5588
                     /gene="hypF"
                     /locus_tag="OQQ26_003912"
     CDS             3336..5588
                     /gene="hypF"
                     /locus_tag="OQQ26_003912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HCS1859195.1"
                     /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
                     GVEVRLLEDPETFLVQLHQHCPPLARIDSVEREPFIWSQLPTEFTIRQSAGGAMNTQI
                     VPDAATCPACLAEMNTPGERRYRYSFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
                     KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
                     LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
                     EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP
                     PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLIQNIYDFTPQYVV
                     HDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAERQWPLDGGDVIALTLDGIGMGE
                     NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSE
                     TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
                     LAASCDGVTHPVTMPLADNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMRE
                     QATMRGITTLVFSGGVIHNHLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
                     RWLAGEVQNG"
     gene            complement(5716..6827)
                     /gene="norW"
                     /locus_tag="OQQ26_003913"
                     /pseudo
     CDS             complement(5716..6827)
                     /gene="norW"
                     /locus_tag="OQQ26_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708518.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
     gene            complement(6824..>7420)
                     /locus_tag="OQQ26_003914"
     CDS             complement(6824..>7420)
                     /locus_tag="OQQ26_003914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HCS1859196.1"
                     /translation="RVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAG
                     LVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWQPDQDALE
                     LCREHGREIARQWALAPLPQSTVNTVVKEETSATTTADLGPRMQCSVCQWIYDPAKGE
                     PMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASEAK"
BASE COUNT         1637 a         1965 c         2104 g         1714 t
ORIGIN      
        1 ttgagtggct ggcaagcccc gccataccgg caaccgcgcc gcaaataaaa ccgctgataa
       61 gactggcgat aagcggacgt ttcaggcgga tcgccacgcc gtataaagcc ggttcggaaa
      121 tccccgccat aatggctgat gccgccgcag ccagcgccgt ctggcgcagt tccgggtttt
      181 tcgttttcca cgctaccgcc agtgatgaac cgcccagcga caggttagcg ccgatctctg
      241 atggcatgac cattccttct ttgccggttt cggcaatggt ctgaatgatg gttggcgtaa
      301 agacgcggtg catcccggtc attaccagca gaggccacag cgcgcccata atggcgactg
      361 aaagccagcc cagataacca tgaatggtgt aaaccagcgc cgaaatggcg ctaccgatcc
      421 agataccaat cgggccaatc agcaggattg ccagcggtgc ggcaatcaac acaatcagca
      481 ttggcttgag gaagtttttg gtcaccgccg gtgtaatgcg atccacccag cgttcgatat
      541 atgacaggca ccaggtcatc accagcgccg ggatcaccgt gtaggtgtat ttcaccgcgg
      601 tgaccgggat cagggcaaat tcgacatgtt caccctgggc cgctttcgcc attaattcaa
      661 taaaactcgg atgtaccagc acacccgcga tggcaatcgc cagcgacata ttggttttaa
      721 atttgatggc ggccgaagcc gcgaccatca gcggcaggaa gaagaaagca ccgtcaccaa
      781 tcacattcag aatggttaag gtcggcgagc cttttgtcag cacgccgctc atctcgagga
      841 tcatcgccag cagtttgacc atcgatccgc cgataatcgc cgggatcagc ggtgacatgg
      901 tgtcgatcag cgcatcgagg atccccgcac caatgcgacg cagcgtgagt ttgggtttac
      961 ccacgggctg tgcgggctgc atatctcccg gcagcaggct gacgacttcc tgaaaggctt
     1021 gtgaaacggt attgccgata atcacctgac actgattgtc actacgtacc acgccgagca
     1081 cgccggggat ggtttttaac gtcgggctgt cgataagctg gtcatctttg ataacaaagc
     1141 gcaaacgcgt catacagtgc gtgactgccg agatgttatc aacgccgccc agtgccgcta
     1201 tcaccgagcg tgccagcgcc gcataatttt tggccatcgg attttatcct gttatcagta
     1261 gggtagatgt agttgttatc agtcgacgtg acggaaaaat gccgatgctg aaacggaatt
     1321 aagaaaccgg tttcacaaaa tcatgaatag ttgtaactga ataagcaaga gagtgaattg
     1381 ttcatttttt atatttgtga aaccggtcac ctgaatattt ttcccgccga ttgcgcaagg
     1441 acaatcggca aacggtgcag tacactgcgt tgattgcgtg taaagggatg aaaatgatga
     1501 cgacgatgct ggaagtggcg aagcgcgccg gggtttcaaa agcgaccgtt tcccgcgtgc
     1561 tttcaggtaa tggctacgtc agccaggaga ctaaagatcg cgtgtttcag gcggtagaag
     1621 agagcggtta ccgcccaaac ttgctggcgc gcaatctgtc ggcgaagagt actcagacgc
     1681 tggggttggt agtgaccaac acgctttacc acggcattta ttttagtgaa ttactgtttc
     1741 atgccgcgcg aatggcggaa gagaaagggc ggcagttgct attggcagat ggtaaacaca
     1801 gcgccgaaga agagcgccag gcgattcagt atctgctgga tctgcgctgc gacgcgatca
     1861 tgatttatcc gcgcttttta agcgtggatg gaattgatga catcattgac gcgcacagtc
     1921 agccgataat ggtgcttaat cgccgcctgc gcaaaaacag cagccatagc gtctggtgcg
     1981 atcataaaca gaccagcttt aacgccgtgg cagagttgat aaacgccgga catcaggaga
     2041 ttgcttttct taccggctcg atggattccc ccaccagcgt tgaacgtctt gccggatata
     2101 aagacgcgct ggcgcagcat ggtattgcgc tcaatgaaaa acttatcgct aacggtaaat
     2161 ggacgcctgc cagcggggcc gaaggggtag aaatgttgct cgaacgtggg gctaaattta
     2221 gcgcgttagt tgccagtaac gacgatatgg cgataggtgc gatgaaagcg ttacacgagt
     2281 gcggcgtagc ggtgccagag caggtgtcag ttatcggatt cgatgatatc gcaattgccc
     2341 cctacatcgt tccggcgctc tccagcgtaa aaattccggt aacagagatg attcaggaaa
     2401 ttattggacg gctgattttt atgctcgatg gcggggattt ctcaccgccg aaaaccttca
     2461 gcggaaaact gatccgccgc gactcactca ttgctccttc gcgataaaca ttgtcatcac
     2521 atgtcatcgt cactagtgtc gatgacatct tttttcctgc attacagaaa ttaatttcct
     2581 taaataacag tgaattaaaa actggcatga tttgtgaatg tatcggcgca ttaactgtca
     2641 ttgctggaga atttgatgaa ccgtttcatc attgctgacg cgagtaaatg tattggttgc
     2701 cgtacctgtg aagtggcgtg cgtggtttct catcaggaaa atcaggactg tgcatcgctg
     2761 accccggaaa catttttacc gcgtatccat gtcattaaag gtgtgaacat ttccacggcg
     2821 acagtttgcc gtcagtgtga agatgcaccg tgcgctaacg tctgcccgaa tggtgctatc
     2881 agccgtgata aagggtttgt tcatgtgatg caggaacgtt gcattggttg caaaacctgc
     2941 gttgtggctt gcccgtatgg cgcgatggaa gtggtggtac gtccggtgat ttgcaacagc
     3001 ggcgcggggc tgaatgtacg ggctgacaaa gccgaagcca ataaatgtga cctgtgcaac
     3061 catcgtgaag acggcccggc gtgtatggcg gcttgcccga ctcatgcact gatttgtgtc
     3121 gatcgtaata aacttgaaca actgagcgca gaaaaacgcc gccgtacggc gctgatgttc
     3181 taaaaatctt acagaactgt tctggcatca aaggaattcc cggaaatatt cgtagaatac
     3241 ggagcgggcg gtatcgccga cctgtgactg ccggatgcga cgctgtcgtg tccggctggg
     3301 cgggttacgc aattcatgat ggcgggaata actcaatggc aaaaaacaca tcttgcggtg
     3361 tccaactgcg tattcgaggc aaagtgcagg gcgtcggttt tcgtccgttt gtctggcagc
     3421 tggcacagca attaaatctt cacggcgatg tctgtaatga cggagatggc gtagaagtcc
     3481 ggctgctgga agacccggaa acgtttcttg ttcaattgca tcagcactgc ccgccgctgg
     3541 cgcgtattga tagcgtcgag cgtgagccgt ttatctggtc acaactgccc accgaattca
     3601 ctatccgcca gagcgcgggc ggtgccatga atacgcaaat tgttcccgat gccgctactt
     3661 gccctgcttg ccttgccgaa atgaataccc caggcgaacg gcgttatcgt tattcgttta
     3721 tcaactgtac ccactgcggc ccgcgcttca ccattattcg cgccatgcct tacgatcgcc
     3781 catttaccgt gatggcggcg tttccgctat gtccggcctg tgacaaagag taccgtgacc
     3841 cgctcgatcg tcgcttccac gcccagccgg tggcctgccc ggagtgtggc ccacatcttg
     3901 aatgggtaag tcatggtgaa catgcagaac aagaggcggc attacaggcg gctatcgcac
     3961 agttaaaaat gggcaacatt gtcgccatca aagggattgg cggatttcat cttgcctgcg
     4021 atgcacgtaa cagtaacgcg gtggcgacac ttcgggcgcg caaacatcgc ccggcgaaac
     4081 cgctggcggt catgttgcca gtggctgacg gtttaccaga cgctgcgcgc cagttgctta
     4141 ccacgcccgc cgcgccgatt gtgctggtgg ataaaaaata cgttcctgag ctttgtgatg
     4201 atatcgcccc tgaccttaac gaagtcgggg taatgttgcc tgcgaacccg ctccagcatt
     4261 tgctgttaca ggaactgcaa tgcccgctgg tgatgacctc cggcaacctg agcggtaaac
     4321 caccagctat cagcaacgaa caggcgctgg cggatttgca gggcattgcc gacggattct
     4381 tgatacataa ccgcgacatc gtgcagcgga tggatgattc ggtggtgcgc gaaagcggcg
     4441 aaatgctgcg ccgttcgcgg gggtatgtgc cggatgcgct ggctttgcct ccgggcttta
     4501 aaaatgttcc gcctgtgctg tgtctcggcg cggatctgaa aaacaccttc tgcctggtgc
     4561 gcggtgaaca agcggtgttg agtcagcatc tgggcgattt aagtgacgat ggcatccaga
     4621 tgcagtggcg cgaagcgtta cgcctgattc aaaacatcta cgatttcact ccgcaatacg
     4681 ttgtgcatga cgcgcatccg ggctatgtct ccagccagtg ggcgcgtgaa atgaatctgc
     4741 cgacgcaaac ggtgctgcat catcatgccc acgcagcggc gtgtctggca gagcgtcagt
     4801 ggccgctgga tggcggtgat gtcattgctt tgacgctcga cggtatcggt atgggggaga
     4861 acggcgcttt gtggggcggc gagtgcctgc gggtgaacta tcgcgaatgt gagcacctgg
     4921 gcggcttgcc tgcagtggcg cttccgggtg gcgatttggc agcgaagcag ccgtggcgaa
     4981 acctgctggc gcagtgcctg cgctttgtgc cggagtggca gaattactct gaaacagcaa
     5041 gtgtgcaaca gcaaaactgg agcgtgctgg cgcgggccat tgagcgtgga attaacgcgc
     5101 cgctggcgtc atcgtgtggg cggttgttcg atgcagtggc ggcggcactg ggctgtgcgc
     5161 cagccacgtt aagttatgaa ggtgaagcgg cttgtgctct ggaagcgctc gcagcctcat
     5221 gcgacggagt gacgcatccg gtgacaatgc cgctggcgga caatcaactg gatctcgcca
     5281 ctttttggca gcagtggctg aactggcagg caccggttaa tcaacgcgcg tgggcatttc
     5341 atgatgcgct ggcgcagggt tttgccgcgt tgatgcgtga gcaggccacg atgcgtggta
     5401 tcactacgct ggtatttagc ggcggggtta ttcataacca tttgctgcgt gcacgtctgg
     5461 cgcattatct cgctgatttc acattgctct ttccacagag tttaccggcg ggtgatggcg
     5521 gtttgtctct ggggcagggg gttattgctg cggcgcgttg gttagcgggt gaagtccaga
     5581 acggataaaa cgtgttgcat ttggacacca ttgccggatg cggcgtaaac gccttacccg
     5641 gcctacacat gcgtccccgt aggtcggata agacgcgcca gcgtcgcatc cgacatttta
     5701 ggcacagtag cccacctaca tcggcaatgt tttcaacaat ccaaatgcct ctttcatccg
     5761 atcctcactg accacaaagg cgcgaagctg gtcagcatcg tcaacgccgc gcgccaccat
     5821 tccctggcgt tcggtattaa tttgccagcg taaatcctga cgctgggttt cgcctgccag
     5881 atgcagcggt aattccggcg ttttgatttt caccagcatc gccggtagtt tcagtggcgt
     5941 gttattgccg agaagatttt ttgccagcac catcgcgcta agttgaatcg gctgcaggaa
     6001 tggcagtacc tgaccgttga tttccgcgca atcgcccagc gctgcagata actatcgacg
     6061 caaacgccgc gattaatcgt cagcccggcg cgtcgtgcca gggcggtttc cgggcgcagt
     6121 ccggtggcgg caattaccgc atccacttcg atgctacgct ggcggtccag cgttgccaga
     6181 atgccagaat ccgttttttc cagcccctgc aactgagatt tcaacaacag atgaacgccc
     6241 atctccgtca accgatgctg caagcggctg cttacttccg gtggcattaa tgacgccaga
     6301 atactggcag cgttgtcgat tagcgtgacc gctttgcctg cacgacaaaa atccatcgcc
     6361 agttcgctac caatcaagcc accaccgaca atcaacacgc gtcgggcatc ccgcagttgc
     6421 gtttcacagg cgcgatactc ttgctgacta tttaacgtca gcattaactc acgcccaggc
     6481 acaggcggga caaaggcgct ggcaccggtt gccagcacta acttgtcgta ttgccactga
     6541 ttattctggc ttttcaccac atgggcttcg gcatcgatat ccgtcaccca ggtgtgcgga
     6601 aacaggcgca gattaaactg cccggcaaat tcacccgccg tctggcgggt aaggtcgtcg
     6661 gcacgttgcc cctgactgat aacatggctg aggtcaggtt tgttgtactc atctatgctg
     6721 tcggcggcaa tcagggttaa tggaatagtg gcgtcctgtt tgcgaatatt tttcaccagt
     6781 tggcgggcgg cgaagcccga accgatgatc acaatgccgt tgctcatttt gcctccgatg
     6841 ccagttcgtc aaagacgtct ttgccgaggg agcattccgg gcagaggaag ttatccggga
     6901 cttcactcca cggcgttcct ggcgcaacgt cctgcattgg ctcgcctttt gccggatcgt
     6961 aaatccactg gcagacgctg cactgcattc gtgggccgag gtcagccgtc gtcgtggcag
     7021 atgtttcttc tttaactacc gtattcaccg tgctctgcgg cagcggcgcg agcgcccact
     7081 gacgggcgat ttcgcgaccg tgttcacggc ataactccag agcgtcctgg tctggttgcc
     7141 atttggcttt caggctgagc gacatttcga aacccgcatc ctgcaggcgc gtggaaaggc
     7201 gatccaccgc accgccgctc cagccgtgag atccgaaagc actggcgcgt ttgttacgga
     7261 agcgtaatcc ggtcatctcc tccaccagcc cggcgatttt cggcatcatc acgttattca
     7321 tcgtcgaagt gccgaccagc acgccttttg agcggaagac attggtcagg atttcgtttt
     7381 tatcgcttcg ggcgacgttg aaaattttca ccgccacgcg
//
LOCUS       DAJVTL010000177         7296 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.179, whole genome shotgun sequence.
ACCESSION   DAJVTL010000177 DAJVTL010000000
VERSION     DAJVTL010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7296
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.179"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            544..1929
                     /gene="dcuC"
                     /locus_tag="OQQ26_003915"
     CDS             544..1929
                     /gene="dcuC"
                     /locus_tag="OQQ26_003915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HCS1859197.1"
                     /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
                     MGHKVLPSSQASTGYSATDIVEYVKILLMSRGSDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
                     VPGTAAAVTGK"
     gene            complement(2039..2719)
                     /gene="dpiA"
                     /locus_tag="OQQ26_003916"
                     /gene_synonym="citB"
     CDS             complement(2039..2719)
                     /gene="dpiA"
                     /locus_tag="OQQ26_003916"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HCS1859198.1"
                     /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM
                     MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF
                     DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID
                     PLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEIIHGKVGR
                     PQRIYHSG"
     gene            complement(2688..4346)
                     /gene="dpiB"
                     /locus_tag="OQQ26_003917"
     CDS             complement(2688..4346)
                     /gene="dpiB"
                     /locus_tag="OQQ26_003917"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
                     /protein_id="HCS1859199.1"
                     /translation="MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTAS
                     FEDYLTLHVRDMAMNQAKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGD
                     RHSIRLYHPNPEKIGYPMQFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVI
                     GVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIA
                     RVVRQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIAEVVRPA
                     DFFTEQIDEKRQDVVANFNGLSVIANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQ
                     IKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGESQAQQQLIDSLREAFAD
                     RQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAIVGNLLDNAFEASLR
                     SDEGNKSVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPGEHGIGLY
                     LIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPIDR"
     gene            4726..5789
                     /gene="citC"
                     /locus_tag="OQQ26_003918"
                     /pseudo
     CDS             4726..5789
                     /gene="citC"
                     /locus_tag="OQQ26_003918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415151.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
     gene            5804..6097
                     /gene="citD"
                     /locus_tag="OQQ26_003919"
     CDS             5804..6097
                     /gene="citD"
                     /locus_tag="OQQ26_003919"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HCS1859200.1"
                     /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
                     IRTTILDVLARYNVRGVQLNVDDKGALDCILRARLEALLARASGIPALPWEDC"
     gene            6097..7005
                     /gene="citE"
                     /locus_tag="OQQ26_003920"
     CDS             6097..7005
                     /gene="citE"
                     /locus_tag="OQQ26_003920"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HCS1859201.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
                     DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPERTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG
                     KMVDGPVIDRARLVLSRAELSGIREE"
     gene            7016..>7296
                     /locus_tag="OQQ26_003921"
     CDS             7016..>7296
                     /locus_tag="OQQ26_003921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415148.1"
                     /note="citrate-ACP transferase, the alpha subunit
                     catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA
                     and citrate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HCS1859202.1"
                     /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR
                     KLCANLEEAIRRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLP"
BASE COUNT         1839 a         1887 c         1704 g         1866 t
ORIGIN      
        1 caaagctaca attaacataa ccttaatagc cccaacataa agaataatct gaatagctgc
       61 tctatttatt tccgcttgtt caagttaaat atttccgcgc atcgatttaa aatgacacat
      121 cgttttctgc gatgggaata gtcataaaag aaaaagctag ttgtttctga taacaaaatg
      181 caatcaagaa aaaatgactt attttttaat aagataccaa aatcatctta acagagaata
      241 tattatatat cgtcaaccca cgcccattgc agattatttt tgagcacgca accgcagcta
      301 acaccattgc aattaacaaa tttgcatcaa tcctccatca atttacacac attattatgt
      361 gataattgcc aaccgctaaa tatgcgtttt gttatctacg tataaaaaca gcaacttcaa
      421 tgtcttaatg gcagtttttc ttgattttaa tcagcattca tcgccaattt attgggcata
      481 ttttttcctt aagctttagg aattttttat tatttacttt ggggcctgga gacaggaaaa
      541 attatgctga cattcattga actccttatt ggggttgtgg ttattgtggg tgtagctcgc
      601 tacatcatta aagggtattc cgccactggt gtgttatttg tcggtggcct gttattgctg
      661 attatcagtg ccattatggg gcacaaagtg ttaccgtcca gccaggcttc aacaggctac
      721 agcgccacgg atatcgttga atacgttaaa atattactaa tgagccgcgg cagcgacctc
      781 ggcatgatga ttatgatgct gtgtggattt gccgcttaca tgacccatat cggcgcgaat
      841 gatatggtgg tcaagctggc gtcaaaacca ttgcagtata ttaactcccc ttacctgctg
      901 atgattgccg cctattttgt tgcttgtctg atgtcactgg ccgtctcttc cgcaaccggt
      961 ctgggtgttt tgctgatggc aaccctgttt ccggtgatgg taaacgttgg tatcagtcgt
     1021 ggcgcagcag ctgccatttg tgcctccccg gcggcgatta ttctcgcacc gacttcaggg
     1081 gatgtggtgc tggcggcgca ggcttccgaa atgtcgctga ttgacttcgc cttcaaaacg
     1141 acgctgccta tctcaattgc tgcaattatc ggcatggcga tcgcccactt cttctggcaa
     1201 cgttatctgg ataaaaaaga gcacatctct catgaaatgt tagatgtcag tgaaatcacc
     1261 accactgccc ccgcgtttta tgccattttg ccgttcacgc cgatcatcgg tgtactgatt
     1321 tttgacggta aatggggtcc gcaattacac atcatcacta ttctggtgat ttgtatgctg
     1381 attgcctcca ttctggagtt cctccgcagc tttaataccc agaaagtttt ctctggtctg
     1441 gaagtggctt atcgcgggat ggcagatgcg tttgctaacg tggtgatgct gctggttgcc
     1501 gctggggtat tcgctcaggg gcttagcacc atcggcttta ttcaaagtct gatttctatc
     1561 gctacctcgt ttggttcggc gagtatcatc ctgatgctgg tattggtgat tctgaccatg
     1621 ctggcggcag tcacgaccgg ttcaggcaat gcgccgtttt atgcgtttgt tgagatgatc
     1681 ccgaaactgg cgcactcttc cggcattaac ccggcgtatt tgactatccc gatgctgcag
     1741 gcgtcaaacc tgggtcgtac cctatcaccc gtttctggcg tagtcgttgc ggttgccggg
     1801 atggcgaaaa tctcaccatt tgaagtcgta aaacgcacct cggtgccggt gcttgttggg
     1861 ctagtgattg ttatcgttgc tacagagctg atggtgccag gaacggcagc agcggtcaca
     1921 ggcaagtaaa tagtaatgcc ggaggcaagt aaatagtaat gccggaggca agtaaatagt
     1981 aatgccggag gcaagtaaat agtaatgccg gaggcaagtt tcctccggct ttatcatgtc
     2041 acccactgtg gtatatgcgt tgtggtctgc caactttgcc gtgaataatt tcagcaataa
     2101 tcagatggcg gctggcgcaa tattcaagat aacgcctggc agtggtgcgg ctgatggtca
     2161 gtgcctgcgc caccgtttct gccgtatgtt gcacaccagg ctctttaaac agttttcgca
     2221 ccgcgtttag cgtcaagggg tcaatgccag tcggcagttc gtctttgggt tcaccgcgag
     2281 cataggcatt aaacatctca tcaatttgct tctggctggc gctatcaata ctttccagca
     2341 tatgtttacg ctggcggaaa cgggttagcg tttgccccag ccgttcatag gcaattggct
     2401 taatgagata atcaaataca ccacaacgta cggcttcaga caccgtttcc atatcactgg
     2461 ctgcagtggt aaacaccacg tcgccgggat aatgcgcctg caccagttca tgcagtaaat
     2521 taatccctct accgtcagga agatagttat cgagcaagat tagccccggc ttaaaacgct
     2581 cgatcatcat tcgggcctgc gccaggtttc ccgccagtaa tatctgactg aatccgggaa
     2641 tgtgacgaat atattccgca tgcatctctg ccagcggcgt ttcgtcctca acgatcaata
     2701 gggttaatgg agctgtcatt aggtttcact ttcggaatat agattgaaaa taaggtaccg
     2761 cagggatcat tatcttcgag agtgataaca ccaccgcagc gcgttacgta gctggcaatc
     2821 aagtacaacc caatgccatg ttcaccgggc tcgtcagcac gcgtactgac cccctgctca
     2881 aatattttgt ctcgtagaga ctctggaacg ccgcagccct gatcggcgac ttcaatcacc
     2941 acatcatcgc cttcatcgct gaggaataat tcaacgctct tgtttccttc atcgctacgc
     3001 aggctggctt cgaaggcgtt atcaagtaaa ttgccaacaa tggcggcaaa ctcggtgcta
     3061 tccagtcctg gcggcagttg cgaaagctgg ctaccgggga cgatgatcat ttttagcccc
     3121 agttcgcggg cgcgctgcac tttaccaaaa agcagccccg ccacctggcg atcggcaaac
     3181 gcctcgcgca ggctgtcaat aagctgttgc tgggcctgag actccccctg caccatcgcc
     3241 agcacgcgat catactcttt catctgcaac agaccattga gcgtcgacat ccaattgaga
     3301 tgctcgtgtc gcaatgtacg aaggctctcg acgtattgtt ttatttgcgt cagttgcgca
     3361 ttgagggtgg aaatttcgtc tttactacga aagctgataa tggcccccag caaatcatca
     3421 cctgaacgaa tagcttcccg attggcaata acgctcagac cgttaaagtt agccaccaca
     3481 tcctgacgtt tttcatcaat ctgttcggta aagaaatcgg cgggcctgac cacttcagca
     3541 atgggtttac ccaaccattg ccgtccgggg gaactcagcc ccagcatctt tcttgcgtta
     3601 cgattgatgg cggtaatgta accgtgcgga tccaccgcaa tcagcccttc ataaaccgaa
     3661 ctaaacagcg cctcttgctg acggaccacg cgtgcgattt gctttggctc catgcccatc
     3721 atctgccgac ggatatgcgc ggccaggaac cacgacagca acatcagaat ccctaacagc
     3781 acgacaaaca cacctgccat cggtaataaa aactcagccc gccagctatc gattttactc
     3841 accaggtagc caatcgacac cacgccgatg acttttccat cgtcatcaaa gattggcgtt
     3901 ttggcgcgca tcgccatacc cattgaccct ttcccggtaa tgaagtagct ctcccctttc
     3961 tccagcgcgc cctgtttggt gaactgcata ggataaccaa ttttctccgg attaggatgg
     4021 taaaggcgga tcgagtgccg gtcgccaatc accacataat caaaatcggt atctctttgt
     4081 aatttgttag cgatggtcgc cagccgtttg tagtcacgcg ttttcaccgc agagatgaca
     4141 ctgtcattgg aggcaataat tttcgcctga ttcattgcca tgtcgcgtac atgaagcgtt
     4201 aaatagtcct caaaactggc cgtaaaatat tgcgccaggg ctgcaatgac aaatattgag
     4261 aacaccagaa tcagcaaaaa gatacgcagc ggaaatgcca gtctttgaaa aaatgcaaac
     4321 tgtttattct cgttaagctg caacattgtt ttccttgcgg gttgtcccga ccctctttga
     4381 cggatgtaat taaaatgttg aatcaaaata catagatatt aattatgatc gttgcaaagt
     4441 ttattcatta aatcaattaa atcacttaaa cctgcgagtc atttcgtaat tacattaatt
     4501 aaaaaactta aaaccattaa ataaataaaa aaccactaac tctatgtgaa ataaatcaaa
     4561 atttcacgcc aaaatactcc ttaggatgta tagcgaaagg agaaaaagat atacctcgat
     4621 cacccccctt tctcccaagt gaaaataaaa ggttatcagt ttgcaacatt gaacaacatt
     4681 cgttgcaaat cgataacaac atgcaccttc aggatactat ttattatgtt cggcaatgat
     4741 attttcaccc gcgtaaaacg ttcagaaaat aaaaaaatgg cggaaatcgc ccaattcctg
     4801 catgaaaatg atttgagcgt tgacaccaca gtcgaagtat ttattacatt accgtaaccc
     4861 gcgatgaaaa gcttatcgcg tgcggtggaa ttgccggaaa tattattaaa tgcgttgcta
     4921 tcagtgaatc cgttcgcggt gaaggactgg cgctgacatt agccactgaa ctgataaacc
     4981 tcgcctatga gcggcacagc acgcatctgt ttatttatac caaaaccgaa tacgaggcgc
     5041 tgttccgcca gtgcggtttt tccacgctga ccagcgtacc aggcgtgatg gtgctgatgg
     5101 aaaacagcgc cacgcgattg aaacgctatg ccgaatcgct gaaaaaattt cgtcatcccg
     5161 ggaacaagat tggctgcatt gtgatgaacg ccaatccctt tacgaagggt caccgttatc
     5221 tgattcaaca ggctgcggca cagtgcgact ggttgcatct gtttttagtc aaagaagatt
     5281 cttcacgctt cccctatgaa gaccggctgg atctggtgtt aaaaggcacc gccgatattc
     5341 cacgcctgac tgtgcatcgc ggctccgaat acatcatctc ccgcgctacg ttcccttgct
     5401 acttcattaa agaacagagc gtcattaacc attgttacac cgaaattgat ctgaagattt
     5461 tccgtcagta cctcgctccc gcgctgggtg taactcaccg ctttgtcggt actgaaccct
     5521 tttgtcgcgt taccgcccag tacaaccagg atatgcgcta ctggctggaa acgccgacta
     5581 tctccgcagc gcccatcgaa ctggttgaaa ttgagcggct gcgttaccag gagatgccga
     5641 tatccgcttc ccgggtacgt caactgctgg cgaaaaacga tctcacggct atcgcgccgc
     5701 tggtccctgc agtcacgctg cattatttgc agaacctgct tgagcactcc cgccaggacg
     5761 cggcagctcg tcaaaagacc cccgcatgag aaacaggtga aaaatgaaaa taaaccagcc
     5821 cgccgttgca ggcacccttg agtctgggga tgtgatgata cgcatcgccc cactcgatac
     5881 gcaggatatc gacctgcaaa tcaacagcag cgttgagaaa cagtttggcg atgcaattcg
     5941 caccaccatt ctggacgttc tcgcccgcta caacgtgcgc ggcgtacagc tgaatgtcga
     6001 tgacaaaggc gcactggact gcattttacg tgcacgactg gaagccctgc tggcacgcgc
     6061 cagcggtatc ccggctctgc catgggagga ttgctaatga tttccgcttc gctgcaacaa
     6121 cgtaaaactc gcacccgccg cagcatgttg tttgtgcctg gtgccaatgc cgcgatggtc
     6181 agcaactcct tcatctaccc ggctgatgcc ctgatgtttg acctcgaaga ctccgtggca
     6241 ttacgtgaaa aagacaccgc ccgccgcatg gtttatcacg cgctgcaaca tccgctgtat
     6301 cgcgatattg aaaccattgt gcgtgtaaac gcgctggatt ccgaatgggg tgttaacgac
     6361 ctggaagccg tcgttcgcgg tggtgcggac gttgtacgtc tgccgaaaac cgataccgct
     6421 caggatgttc tggatatcga aaaagagatc ctgcgtatag aaaaagcctg tggtcgtgaa
     6481 cccggcagca ccggcctgct ggcggcgatt gaatctccgc tgggcattac ccgcgcagtg
     6541 gaaatcgctc acgcttccga gcgtttgatc ggtatcgccc tcggtgcaga agactatgtg
     6601 cgcaacctgc gtacagaacg ctccccggaa agaactgaac tgctgttcgc acgctgttcc
     6661 attttgcagg ccgcgcgctc tgcgggtatt caggcgttcg ataccgtcta ttccgacgct
     6721 aacaacgaag ccggattcct gcaagaagcc gcccacatca aacagctggg ctttgacggc
     6781 aaatcgctga tcaacccacg tcagattgat ctgctgcaca acctctacgc accgacccag
     6841 aaagaagtgg atcacgcccg ccgcgtcgta gaagccgctg aagccgccgc tcgcgaaggc
     6901 ctcggtgtgg tttccctgaa cggcaagatg gtggacggtc cggttatcga tcgcgcccgt
     6961 ctggtgctct ctcgtgcaga actttccggc atccgcgaag aataaggcaa tcaaaatgac
     7021 gcagaaaatt gaacaatctc aacgacaaga acgggtagcg gcctggaatc gtcgcgctga
     7081 atgcgatctt gccgctttcc agaactcacc aaagcaaacc taccaggctg aaaaagcgcg
     7141 cgatcgcaaa ctgtgcgcca acctggaaga agcgattcgt cgctctggtt tacaggacgg
     7201 catgacggtt tccttccatc acgctttccg tggcggtgac ctgaccgtca atatggtgat
     7261 ggacgtcatc gcgaagatgg gctttaaaaa cctgcc
//
LOCUS       DAJVTL010000178         7250 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.180, whole genome shotgun sequence.
ACCESSION   DAJVTL010000178 DAJVTL010000000
VERSION     DAJVTL010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7250
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.180"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..286)
                     /locus_tag="OQQ26_003922"
     CDS             complement(<1..286)
                     /locus_tag="OQQ26_003922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859203.1"
                     /translation="MHYMKWIYPRRLRNQMILMAILMVIVPTLTIGYIVETEGRSAVL
                     SEKEKKLSAVVNLLNQALGDRYDLYIDLPREERIRALNAELAPITENITHA"
     gene            453..3302
                     /gene="rcsC"
                     /locus_tag="OQQ26_003923"
     CDS             453..3302
                     /gene="rcsC"
                     /locus_tag="OQQ26_003923"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HCS1859204.1"
                     /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
                     EPLFADSDCSAMSNTWRGSVESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANW
                     LQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSW
                     FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA
                     RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYERQE
                     PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
                     YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES"
     gene            complement(3502..4152)
                     /gene="rcsB"
                     /locus_tag="OQQ26_003924"
     CDS             complement(3502..4152)
                     /gene="rcsB"
                     /locus_tag="OQQ26_003924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HCS1859205.1"
                     /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
     gene            complement(4169..6841)
                     /gene="rcsD"
                     /locus_tag="OQQ26_003925"
     CDS             complement(4169..6841)
                     /gene="rcsD"
                     /locus_tag="OQQ26_003925"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HCS1859206.1"
                     /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIQKRVDTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYL
                     EKPRRKTEALIFGSHDNSTLEMTQRVSTYLDTLWGAENVQWSMYYLNGQDNSLVLIST
                     LPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT
                     FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSASIHFNS
                     TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS
                     SRSTESLPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL
                     NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
                     AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDE
                     IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD
                     RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH
                     FPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE
                     VEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNP
                     SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG
                     GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG
                     KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL"
BASE COUNT         1787 a         1692 c         1846 g         1925 t
ORIGIN      
        1 aggcgtgagt gatattttcg gtaatggggg caagttctgc atttaatgcg cggatacgct
       61 cctcacgcgg taagtcgatg tagagatcat agcgatcgcc tagtgcctga ttaagcaggt
      121 tgaccacggc agaaagtttt ttctcttttt cagataagac tgctgaacgt ccttccgttt
      181 ctacgatata accaatagta agcgttggga caatgaccat caggattgcc atcaggatca
      241 tttgattacg taagcggcgt ggataaatcc acttcatata atgcatgctg aaatccacta
      301 gtcttgtccg gtatatgacg attatcagag gttaaggtga tgatttctcg gcggtgtatc
      361 atattccaga gaagagagaa cattgcggta acacgctttt accgctacct taaccacact
      421 ccattggtca cctgaggcgg agcttcgccc ctttgaaata ccttgcttct tttcgtacaa
      481 ccctgaaagc ctcgcgctac atgttcagag cattggcgtt agtgctctgg ctgttgattg
      541 ctttttcatc cgttttttac atcgttaatg cgttacatca gcgagaatcg gaaattcgtc
      601 aggaatttaa tctgagttcc gatcaggctc agcgctttat tcaacgcacc tctgatgtga
      661 tgaaagagct gaagtacatc gccgaaaatc gcttatcggc agaaaacggt gtgctttccc
      721 cgcgtggacg agaaacgcag gcggatgtgc ctgcgtttga accgctgttt gccgactccg
      781 attgttccgc aatgagtaac acctggcgag gttctgtgga gtcattggcg tggtttatgc
      841 gctactggcg cgataatttt tctgcggctt acgatctaaa ccgggtattt ttaatcggca
      901 gcgataacct ctgcatggcc aatttcggtc tgcgtgatat gccagtggaa cgcgataccg
      961 cgttgaaagc tttgcatgaa cgcatcaata aatatcgaaa tgcaccacaa gatgatagcg
     1021 gcagtaacct ctactggatc agcgaaggtc cgcgccctgg cgtcgggtat ttttacgcgt
     1081 tgacgccagt ttatctggcg aactggttgc aggcgctttt gggtgtcgag cagaccatcc
     1141 ggatggagaa ctttttctta ccgggtacgt tgccgatggg ggttaccatt cttgatgaaa
     1201 atggtcatac cctgatttcg cttaccggac cagaaagtaa aattaagggc gatcctcgct
     1261 ggatgcagga acgctcctgg tttggctata cggaagggtt ccgggagctg gtgctgaaga
     1321 aaaatctgcc accctcatcg ctaagcatcg tgtattcggt gccggttgat aaggtgctgg
     1381 aacgcattcg catgttgatc cttaacgcaa ttttgctgaa tgtgcttgcc ggagctgcat
     1441 tgtttactct cgcacggatg tacgagcgac gtattttcat tccggcggaa agcgacgccc
     1501 tgcgactgga agaacatgag cagttcaatc gcaagattgt cgcctccgcg ccagtgggta
     1561 tctgcatttt gcgtaccgct gatggcgtca atattttaag taacgaactg gcgcatacct
     1621 atctcaatat gcttacgcat gaggaccgcc aacgactgac gcaaattatc tgtgggcagc
     1681 aggtcaattt tgttgatgtc ctgaccagca acaataccaa tctgcaaatc agcttcgtcc
     1741 attcgcgcta tcgtaatgaa aacgtggcca tttgtgtgct ggtggatgtt tcttcgcgcg
     1801 tgaagatgga agagtcgttg caggagatgg cacaagcagc ggaacaggcg agccagtcaa
     1861 aatcgatgtt ccttgccacc gtcagtcatg agctgcgaac gccgctgtat ggcattatcg
     1921 gtaacctgga tctgttgcaa accaaagagt taccgaaagg cgtcgatcgg ctggtgacgg
     1981 caatgaacaa ctcttccagc ctgttgttga aaattatcag cgatattctc gatttctcga
     2041 agattgaatc ggaacagttg aagatcgaac cgcgtgagtt ttcaccgcgt gaagtgatga
     2101 accacatcac cgccaactat ttaccgctgg tggtacgcaa gcagttaggc ttgtactgct
     2161 ttattgaacc ggatgtgcca gtggccttaa atggcgaccc gatgcgttta cagcaggtca
     2221 tctccaacct gttgagtaac gccataaaat tcaccgatac cggctgtata gttttgcatg
     2281 tccgcgctga tggcgattat ctctctatcc gtgttcgcga taccggcgtg gggattccgg
     2341 cgaaagaagt ggtgcgcttg tttgatccct tcttccaggt cggaacgggc gtacagcgaa
     2401 acttccaggg gaccggtctg ggtctggcga tttgtgaaaa actgatcagc atgatggacg
     2461 gcgatatctc ggtagattca gaaccgggaa tgggcagcca gtttaccgtg cgtattccgt
     2521 tgtacggcgc tcagtacccg cagaaaaaag gcgtggaagg gttgagtggt aaacgctgct
     2581 ggctggcggt ccgcaatgcg tcgctctgtc agttcctgga aaccagtttg cagcgcagcg
     2641 gcatcgtcgt tacaacatac gaaaggcaag aaccgactcc cgaagatgtg ttaattactg
     2701 acgaggtagt gagtaaaaaa tggcagggta gagcggtagt gaccttctgt cgtcgccata
     2761 ttggtattcc gctggagaaa gcgccagggg agtgggtaca cagtgtggct gccccgcatg
     2821 agctaccggc attgttggcg cgtatttatt tgatcgagat ggagagcgac gatcctgcta
     2881 acgctctgcc gtcgacggac aaagcggtca gcgataatga cgatatgatg attctggtcg
     2941 tggatgatca tccgattaac cgacgtctgc tggcagatca gttgggatcg ttgggctatc
     3001 aatgtaaaac cgcgaatgat ggcgtcgatg cgcttaatgt acttagcaag aatcatattg
     3061 atatcgtgct tagcgacgtc aacatgccaa atatggatgg ttaccgcttg acgcaacgca
     3121 ttcgtcagtt gggactgacg ttgccggtaa tcggagtaac tgctaatgcg ttggctgaag
     3181 agaagcagcg gtgtctggag tccggtatgg acagttgcct gtcgaagccg gtaacgctgg
     3241 atgtgataaa acagacgctg acggtatatg ccgagagggt caggaaatcg cgggaatcgt
     3301 aggacggata aggtgtttat gccgcatctg gcattcagtg caaatgccag atgcgacgct
     3361 gacgcgtctt atctggccta ctttgatgta atctgttgaa ataatgggaa tcgtaggacg
     3421 cataaggcgt ttacgccgca tccggcaatc ggtgcaaatg ccagataaga cactaacgcg
     3481 tcttatctgg cctacaggtg attagtcttt atctgccgga cttaacgtca ctgaagagag
     3541 ataattcagc agggcgatat cgttctcgac acccagcttc atcatcgcag atttcttctg
     3601 gctactgatg gttttaatac tgcggttcag ctttttagcg atctcggtca ccaggaagcc
     3661 ttccgcaaac aggcgcagaa cttcactctc ttttggcgag agacgcttgt caccgtaacc
     3721 accagcactg attttttcca acaggcgaga aacgctttcc ggggtaaatt tcttcccttt
     3781 ctgcagcgcg gcgagagctt tcggcagatc ggtcggtgca ccttgtttca gcacgatccc
     3841 ttcgatatcc agatccaata ccgcactaag aatcgccggg ttgttgttca tagtcagaac
     3901 aatgatcgac aggcttggga aatggcgctt gatgtacttg attaaggtaa tgccatcgcc
     3961 gtacttatcg ccaggcatgg agagatcggt aatcaacaca tgcgcatcca gtttcggcag
     4021 gttgttgatc agtgctgtag agtcttcaaa ttcgccgaca acattcaccc actcaatttg
     4081 ctcaagtgat ttgcgaatac cgaacaagac tatcggatgg tcatcggcaa taattacgtt
     4141 catattgttc atgtaatagg ctaccttgct acagcaagct cttgacataa ctgtcaatgt
     4201 cgctgatgta tttttctatt cctggaacat ccttctcacg aatcagatgt tccagcgttt
     4261 cacataactg cttgccgggt accagattta gcatggcaaa tacgccttta agacgatgag
     4321 ccgtttgggc taacgcagca aagtcactgg ttgctgcttc agtatacagt ctcttaacat
     4381 catccggtac tgtgtctaca aagagcgcat aatagccgct ggcatggagt tgcgcatttt
     4441 catctccgcc cagaggcgat tctgtcacct cttcctgcgc cagttgcact tcaattaatt
     4501 gtaagaccgc ttcctgcata gcgttgctca tattgaagtt gacgcacaat tgaccaggcc
     4561 caatttcccg tacgccagac tcatcatcgc ttaaaagcaa gccagaggca gtaagattag
     4621 acggattatc cgttaaaaag atatcataat cttgactaat taatctttca tcgggtgtga
     4681 tacaggttgc accccaattt tctaactggc gagtgacaat attccgaatt tctgccgaag
     4741 taacatccac cattacgcag acatcatcca gtaaacgctc ttcttcctct tcaacttccg
     4801 ggtcagcggc gagcattttg atatgcacag agtagcgtgt accaagccca tcccgcgttt
     4861 tgatgtttaa atgaccgccc agtttacgtg ccagttgatc gctcagccag aatgccagcg
     4921 ggtccgcctt tccataacga tcgttttggg tctggttgat aaacgggaag tgcaaattat
     4981 ccatttcatg aatacttacg ccttctcccg tgtccagaat gcggaatgtc aggcggtctt
     5041 cagaggactc atcctgatca acctcaaggg tgatttttcc caattgcgtt gaggtcacgg
     5101 catattgcat cagtagcagc aaaatacgtc gtaaggcatc gcgatcgccg cggcgcatat
     5161 cgtgtgcttt cagatgattg ttaatcagca gttgcagacc tttacgcttg atggcaggca
     5221 acactgaagg cacaacttca tcaattaaat cctgcacgga gaacagcacc gtctcacttt
     5281 tccagctatc atccgcaagc atgttcgcta actgtatttc atcgaccagc cgcaccagca
     5341 catctgcctg attcgccagt tgtttgcttt ccggggcgtt gagtttagcc gcgctctccg
     5401 ccagggactg tgcgggttct ttcagcgcat cgccaatgtt tttcataaag gtcatccgcc
     5461 cctgctggtt tttctcatac agacgctgcg cctgcttgag tttcttgttt accagcactt
     5521 cgcgatcctg atcgcgaata atgaaaattt gtgtgcgcgg cgcgacctgg ctgcggaaca
     5581 tgcggatctc atacagctcg ttattgatcg tcgcctgaat aatcccctga tgctgttccg
     5641 ccatggtggt gatgttttgc agattcaaat gtggcagcaa atgatcggca attttgttac
     5701 ttatgacagt gcggttcgat tcctgatcgt gaaccagcag gccgagcggc agcagtgaga
     5761 ctatctcttc attgattgcc cgtaaaatgc gcaattcgtt attgaccgct gtgctgggta
     5821 gactttctgt actgcggctg gagaaatggc ggaatgtggt atagccaaat aacgccagcg
     5881 ccagcaaacc gatgttcagc agcagtggca gcagaatgtt ttgcaacgta tccagcaata
     5941 aggtgccata aggaacctgc cagaccaggc gcatatcggt agagttgagt gccgaggaga
     6001 tttcaatctt cgtactgtta aagtggatac tggcgctatc cgtcccttct ttctcattat
     6061 cattgtttcc cgttgccgtc gcatctggct caaggcggaa actgtccagc ggcatacccg
     6121 gtgggatcaa atcattaatc ggcagatcaa aagccacgac cgttgccaga tgtcccggct
     6181 ggttaaaggt ggtacgcaag gtaaagtaat gaccgttctg ccaggccagg cggcgcatgt
     6241 tagaaaaact ttcgcgttca tcgagggcgt tggcctgttg caacatctct gcacgacgtg
     6301 aatcaacaat gtcgctgacg gtcgattctt taaatccgga ggtgagatct ttgaggggca
     6361 gggttgagat cagtaccaga ctgttatcct gaccattcag gtaatacatc gaccattgta
     6421 cattttctgc gccccacaat gtatccagat aagtggacac ccgctgagtc atctcaagcg
     6481 ttgagttgtc gtgagagcca aagattaacg cttccgtttt gcgacgaggt ttttccagat
     6541 agtagacatc ctgtttcagg cgcgtctctt gtaaaccttc gccggaggag ggggaggtcg
     6601 tcgcggcaat gttgtcgtag atctgccagg tcacgtaacg ccaggtatcg acgcgctttt
     6661 ggatagcgtg ggtaatgtcg acaatctggt aacttttatc tttcagccag gcgttaacgg
     6721 cgctttgtac cattaccccc atcgtcacca gtaacacaat gatcaacagt aaaaagaagc
     6781 gggtaatgct ccccggtagg agtgaaaagc gggtcgtggc cgttgtctct ttctgacgca
     6841 ttcgtgttta tgacctgtta aaacttcgcg aagtgatagg gcagtataaa gggtacagtg
     6901 tgaaattcca gactcttacc tgattgatga ttctctattc tccagtgata tttatcatcc
     6961 tgcattgggt gaaatagatg tacaagcgcc attttgctgt acaaataacc tacaaaaagc
     7021 ccaacgaaat taattgcaaa taaacgaaga ttgttggaaa ttatgctgat gttaattatt
     7081 tgtgaaatag ttaacaagcg ttatagtttt gctctggtag cacagaataa tgaaaagtgt
     7141 gtaaagaagg gtaaaaaaaa ccggatgcga ggcatccggt tgaaataggg gtaaacagac
     7201 attcagaaat gaatgacggt aataaataaa gttaatgatg atagcgggag
//
LOCUS       DAJVTL010000179         7212 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.181, whole genome shotgun sequence.
ACCESSION   DAJVTL010000179 DAJVTL010000000
VERSION     DAJVTL010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7212
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.181"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..347)
                     /locus_tag="OQQ26_003926"
     CDS             complement(<1..347)
                     /locus_tag="OQQ26_003926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000065835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HCS1859207.1"
                     /translation="MFDIVEFVKQQERFFCKALTEPTLTWAKESQFAIQQFQKNAFLA
                     DTARANLPSAQNAIINVAAIGITLNPASKLAYLVPRKKAVCLDISYMGLLHLAQVTGA
                     IQWGQCKLVYEKD"
     gene            complement(365..646)
                     /gene="gamL"
                     /locus_tag="OQQ26_003927"
     CDS             complement(365..646)
                     /gene="gamL"
                     /locus_tag="OQQ26_003927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000995345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host nuclease inhibitor GamL"
                     /protein_id="HCS1859208.1"
                     /translation="MNAYLTCDRIEERRWVNQHIQDEKDKWIDDRAQELISMFPDKPL
                     LMSSLFLPKEAQLALTGEKAEEAYNDYISAIAYARAEEEWERKFSPCPF"
     gene            complement(667..948)
                     /locus_tag="OQQ26_003928"
     CDS             complement(667..948)
                     /locus_tag="OQQ26_003928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000934192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HCS1859209.1"
                     /translation="MLNQKININVKNVITPAETIMGEVFMDDKIIAYFVVLPDEAISV
                     IDTEGNVMFIAEHSEDIALQAAAYFFAKEQEEECNCPVCQLSRQINLMH"
     gene            complement(960..1172)
                     /locus_tag="OQQ26_003929"
     CDS             complement(960..1172)
                     /locus_tag="OQQ26_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000917251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor protein"
                     /protein_id="HCS1859210.1"
                     /translation="MLKPHYGTALVSREDVKPGTAILYNGRYYMASANVNNALYAHSL
                     IEKIRIISDAIEVYLNHKGQPLISPA"
     gene            complement(1243..2133)
                     /locus_tag="OQQ26_003930"
     CDS             complement(1243..2133)
                     /locus_tag="OQQ26_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCS1859211.1"
                     /translation="MWRTPHKTGAGISTPKVTRAHNRAEAVFLCVMHSHIQIMVRRAG
                     QPQGWPGSRVTGSANPVRLTTHEISTSGGELINLSLEDVIMATTLSHPDVTIENGRAV
                     TTSISIAEFFGKQHHHVVQKIESLECSEQFLTRNFSRVKFEHRGNTYNAYQITKNGFV
                     FLVMGFTGKKAAAFKEAYIAEFDRMEKQLWEQKQLALSSPAMNINFPLSWFSEHHPYA
                     TMNYVDRNTLQLDTSVLFDMPSPAMRIFNELRRNGYNVDAAVAEFNAFKHLTEEMRRK
                     LLDISCTSEKSSRFGFNVNL"
     gene            2789..3037
                     /locus_tag="OQQ26_003931"
     CDS             2789..3037
                     /locus_tag="OQQ26_003931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000520549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HCS1859212.1"
                     /translation="MGKADKLLEKFLNSKKTFEWDELVVLFSSLGYVKKEMQGSRVRF
                     FNAEINHTILMHRPHPESYIKGGTLKAIKQNLKEAGVL"
     gene            3034..3378
                     /locus_tag="OQQ26_003932"
     CDS             3034..3378
                     /locus_tag="OQQ26_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000681609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HCS1859213.1"
                     /translation="MNHLKYKGYLGTVEPDFENNILYGKLAFIRDLVTYEASTLAELE
                     QEFKTSVELYLQSCVEDGKEPDTPFKGVFNVRLDPELHRRVAEMAMEEDLSLNAFVNK
                     ALEKEVNHHTGA"
     gene            complement(3493..3663)
                     /locus_tag="OQQ26_003933"
     CDS             complement(3493..3663)
                     /locus_tag="OQQ26_003933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008322499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859214.1"
                     /translation="MNKDKSLTQQVEEILSKQKVSEQGKMIQSLKNMGLINKPVFTLA
                     YGPDITTCQMHQ"
     gene            complement(3785..4504)
                     /locus_tag="OQQ26_003934"
     CDS             complement(3785..4504)
                     /locus_tag="OQQ26_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000162431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HCS1859215.1"
                     /translation="MTKKITITDKDIQNAERLRKIWDEKRKQLSLSQEKAADILGFKT
                     QGAVSQLLNAKIALNTENTLKFAALLQVPAEEINPDLSDLLRSIRTHTPGNRRNLFEK
                     YYEYPLLSCVQAGAFSMDDFSYTAKDAIKWISTTTKASDRSFWLEVKGHSMTAPQGGK
                     PSFPEGMLILVDPEREIEDGDFCVARMNGDEFTFKRFIRESGKAYLEPLNPRFDMIEC
                     NENCQFVGKVIKSQWNDETFD"
     gene            4610..4849
                     /locus_tag="OQQ26_003935"
     CDS             4610..4849
                     /locus_tag="OQQ26_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000171145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1859216.1"
                     /translation="MTLDEYLRQSSIRQADFAAIVGVSQGFVSGVITGRYMPQGRKAI
                     EWAKATDWNVTPHELNPHDYLNMEDGIPLHVRQTA"
     gene            5012..5197
                     /locus_tag="OQQ26_003936"
     CDS             5012..5197
                     /locus_tag="OQQ26_003936"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859217.1"
                     /translation="MGQGACIVQEGQQGKTERQHPVTGVCPEVRESQPWLDAFASSDT
                     EGIDLIKVIIFCEMISH"
     gene            5375..5761
                     /locus_tag="OQQ26_003937"
     CDS             5375..5761
                     /locus_tag="OQQ26_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000470023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859218.1"
                     /translation="MFIKHVVISLLGNKFYTGKDKVTFDYVLAAKLRDAGLAIERNYL
                     VDMGNGKRGFVDIMVVAPSGERCAIEVDRASPRARSILKLRRLKLYGIPGIVLLRCSR
                     NPDQYVSDEIDVIPATGKSRSKGASC"
     gene            5755..>7212
                     /locus_tag="OQQ26_003938"
     CDS             5755..>7212
                     /locus_tag="OQQ26_003938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016232230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HCS1859219.1"
                     /translation="MLKIIPNFAQERGLNQLRHQWKQHRTYLMYAPTGSGKTGLAAFV
                     TAGMVERGMRVMFVCPYTILLNQTAERFTEYGLPWEEISFVWRDHPNYDPSRLIQIAS
                     ADTLIRREFPNNIDLLIIDEAHMKRRALLEVIRDRDIRVLGLSGTPFAAWMGKYYECL
                     IKPTTIRELIQRGDLSDYEFFAPSMPDLAGVKTSNTVFGRDYNEEQLASIMGSSDLVG
                     DIVRNWLENGEDLPTICFCVNVAHANFVTREFLQAGIGAEVMTADTLHDERQDIIRRF
                     EEGVTKIIVNVGVLVAGFDSDVRCLIYARPTKSEIRWLQCIGRALRTAPGKQRALIFD
                     HSGTVHRLGFPEDIEYDELPGKNDGMKASAGGGEVKAEKLPRECPKCHFMKPAGVHMC
                     PKCGFRPLGGDDVATDRDRKLSRVNKGKREYSREEKQRWWSEIKGYQNYRNATGKPLS
                     DGWCAHTYKEKFGVWPKGFSNAPLQTSVEVHNFIKS"
BASE COUNT         1902 a         1567 c         1811 g         1932 t
ORIGIN      
        1 atgtccttct cgtaaacaag tttgcattgc ccccactgaa tggctcctgt gacctgtgcc
       61 agatgcagaa gccccatata actgatatcc aggcatacag ccttttttcg tgggaccaga
      121 tacgccagct tgctggccgg gttcagggtt atgccgatgg cggcaacatt gatgatagcg
      181 ttctgtgcgc tgggcagatt tgcccgtgct gtgtcagcca gaaaggcatt tttctggaat
      241 tgctgaattg caaactgact ttccttcgcc catgtcagcg tcggttcagt taatgccttg
      301 cagaaaaagc gctcctgctg cttaacaaat tcaacgatat cgaacatttt tttggtcctg
      361 aaaatcagaa aggacagggg gagaattttc tctcccattc ttcttccgcc cgagcatagg
      421 cgatcgctga gatataatcg ttgtacgcct cttcagcttt ttcgccagtg agtgccagtt
      481 gggcttcttt gggtaaaaaa aggctgctca taagcaatgg tttatcgggg aacatgctga
      541 taagctcctg cgcccgatca tcaatccatt tatccttttc atcctgaata tgctgattaa
      601 cccagcgacg ctcctctatg cggtcgcagg tgaggtatgc gttcatggcg gaactcctga
      661 ttccggttaa tgcattaaat taatttgtcg ggaaagctga cagacagggc agttacattc
      721 ttcctcctgc tctttagcga agaaatatgc agcggcctgt aatgcgatgt cttctgaatg
      781 ttccgcgata aacataacat tgccttccgt atcaataaca gaaatagcct catcaggcag
      841 gacgacaaaa taggcgatga ttttatcatc cataaaaact tctcccatta tcgtttctgc
      901 tggcgttatg acgtttttta cattgatatt aattttttga ttgagcatga tatttccttt
      961 caggctggtg agattaacgg ttggccttta tggttcaggt aaacttcgat tgcatctgaa
     1021 ataatgcgga ttttttcaat cagtgaatgt gcgtaaagtg cattattaac gttagctgac
     1081 gccatgtaat aacgcccgtt gtaaagaatt gctgtaccgg gtttaacgtc ctcgcgagaa
     1141 actaatgcgg ttccgtagtg aggtttgagc atgacaaatc ctccggttaa ttaatccaga
     1201 tatttaattt aatccccgat atgtgatcgg ggatggggtt aattaaagat taacgttgaa
     1261 accaaagcgg gaagactttt ccgatgtgca ggaaatatcc agcaatttac ggcgcatttc
     1321 ttccgtcaga tgcttgaagg cgttaaattc ggcgacagcc gcatcgacgt tatagccgtt
     1381 acgacgtaat tcattaaata tgcgcattgc agggcttggc atgtcgaata agacggaggt
     1441 atcaagctgc aatgtatttc tatcaacata gttcatcgtg gcataggggt gatgctctga
     1501 aaaccacgat aaagggaaat tgatattcat cgcaggagaa gacagggcca gttgtttctg
     1561 ttcccatagt tgtttttcca tgcgatcgaa ttcagcaatg taggcttcct tgaatgcagc
     1621 tgcttttttg ccggtgaagc ccatcaccag aaaaacgaag ccgtttttgg tgatttggta
     1681 ggcgttatag gtattgcctc ggtgttcgaa tttaacccgc gaaaagttgc gggttaagaa
     1741 ttgctcagag cattcgaggg attctatttt ctgaacaaca tggtgatgct gcttgccaaa
     1801 aaactcagca atcgaaatag aagtagtgac ggcgcgacca ttttcgatgg ttacgtcagg
     1861 gtgagaaagg gtagtagcca taatgacatc ctcaagtgat aagttaatta actcaccacc
     1921 agaggtgcta atctcatggg tggtgagacg cacagggtta gcactaccgg tcactcgaga
     1981 acccggccag ccttgcggct gccccgcacg cctcaccata atttgaatgt ggctgtgcat
     2041 tacgcataaa aaaaccgctt cagcgcggtt atgcgctcga gtaactttcg gggtgctaat
     2101 cccggcaccc gttttatgag gtgttcgcca aatatagccc cgacatcaca cgcagtcaat
     2161 atcgtccttt ctcggaaatg ctttggcggt gccgcctgca ccccaaaaca ttccctgtat
     2221 tggtcagcgc caacttcctg ccagtgttgc ccgttctcac gccgttctcg ctctcgcgcg
     2281 gggatactct ctcatcgacc ggatcgcacc cgatgataca gcacgtttac gtgtaggggt
     2341 ctaaacaggt cattgacgct gtaaagctcc agattgttaa agagcatttt gcggcgggtt
     2401 aagtcgcgcc gtacgactga tttatgtagc cctgtgtcag ggcgcgatgt ttctggcttg
     2461 ggtaaaatat aataagtgca actgatcaca gttaatagta agacaaataa tttaatttta
     2521 atctatgtga ttgattttta gattaattta tttatgtaaa aaatataagc gaggataatg
     2581 caggtggtga gttatggagg atgcgcaaag aaaaaccggc gctgaggccg gttactctgt
     2641 gttagatttg gtgtgaggga accccctgat aacactaaga aaagcagtga acagtcaaag
     2701 agaacccagc gggcttggtg gcttttgaca aaaacatcgc ctgtaactat aattagttgc
     2761 aatgtagcga agatgagatt atgtgggtat ggggaaagca gataagctac tggaaaagtt
     2821 tttaaacagt aaaaaaacgt ttgaatggga tgagttggtc gttttgtttt cctctctggg
     2881 atatgtcaaa aaggaaatgc agggctcaag agtgcggttt ttcaatgctg aaatcaacca
     2941 caccatatta atgcatcgcc cacatccaga aagttatatt aaaggtggaa cgctgaaagc
     3001 gattaaacag aatctgaaag aggctggggt attatgaatc atctaaaata taaaggatat
     3061 ttaggtacag tagaaccaga ttttgaaaat aatatcctgt acggaaaact ggcgtttatt
     3121 cgagacctgg taacttatga ggcttctaca ttagctgaac tggaacagga gtttaagaca
     3181 tcggttgagc tgtatttaca gtcttgtgtg gaggatggaa aggagcctga taccccgttt
     3241 aaaggtgtgt ttaacgtcag acttgatcca gaactgcatc gtcgggtcgc tgaaatggcg
     3301 atggaagaag atttatcact gaacgccttt gttaataagg cgctggaaaa agaagtcaac
     3361 catcacacag gggcttaatg ttcccttcgt ctttgacatc ctcaccgccg aagaatgggg
     3421 aatttacggc gcactggtaa atggtggggc gagcaggagg caaacaaaac ccggcaccaa
     3481 ggccgggttt tgttattggt gcatttggca ggttgtaata tctggtccat aagccaaagt
     3541 aaaaacaggc ttgttgatca agcccatgtt ctttaatgat tgaatcattt ttccttgctc
     3601 gctaactttt tgcttgctaa gtatttcttc cacttgttgt gtcaaggatt tgtctttgtt
     3661 catttatggc tcacttgatt gcgactgctc cccgcccgca ttgggcgagg gttctcggag
     3721 atttttcgct gaaaaaggaa ataaaatagc ctccctgcaa ggttattgat atcatcctgt
     3781 gagttcaatc aaaagtctca tcattccact gcgactttat gacctttccg acaaactggc
     3841 agttttcgtt acactcaatc atgtcgaatc gtgggttgag tggctccagg tacgctttac
     3901 cgctctcacg aatgaatcgt ttgaaggtga attcatcgcc attcattcgg gccacgcaaa
     3961 aatcgccatc ctcaatctcc cgctcagggt caacgagtat cagcatccct tcggggaaac
     4021 tgggtttacc accctgcggc gcggtcattg aatgcccctt gacctccagc cagaacgacc
     4081 tgtcactggc ttttgtggtg gtggagatcc acttaatcgc atcctttgcg gtgtacgaaa
     4141 aatcatccat tgagaaagct ccagcctgta cgcaggagag taacggatat tcgtaatatt
     4201 tctcgaacag gttacgcctg tttcccggtg tgtgggtacg aatactgcgt aacaaatcac
     4261 tcagatctgg attaatttct tccgcaggaa cctgtaataa agccgcaaac ttaagggtat
     4321 tttcagtatt taacgcaatt tttgcgttca ataactgact aacagccccc tgcgttttga
     4381 agccgaggat atctgcggct ttttcctggc ttagggatag ctgtttccgt ttttcatccc
     4441 agattttgcg cagtcgttca gcgttctgga tgtctttgtc agtaattgta attttcttcg
     4501 tcatagtgcc tccgatttta ttagcaacac aaatatttat caaatagcta gcctattgac
     4561 atttaaatca ggtaagctaa tatcggaaaa ttgaaatggg aggatctcta tgactcttga
     4621 cgagtacttg agacaaagct ctatcagaca agccgatttt gcggcgattg ttggagtttc
     4681 tcagggattt gtcagtgggg ttattacagg gagatacatg cctcaggggc ggaaagccat
     4741 tgaatgggca aaagctacag actggaatgt aactccccat gaactaaacc cgcatgacta
     4801 cctaaacatg gaagatggta ttccgcttca tgtaaggcaa acagcctgat aaccctccat
     4861 cggaggtgtg agtgaacagg caaatcaaaa cggttatgcc cgatcagtac tgtgatgctg
     4921 atcgggactg gatacaggag caattgttac agctagaccc gaccaccagg gtaaaaattg
     4981 cagcagagta cgcgagagtg taccaggaag agtgggacaa ggagcctgta tcgttcagga
     5041 agggcaacag ggcaagacgg agcgccaaca cccggttacg ggtgtatgtc cagaagtacg
     5101 cgagagccag ccgtggctgg atgctttcgc cagtagcgat acggaaggaa tagatctcat
     5161 caaggtgatt attttttgtg aaatgatttc acattaaacc attgcacttg aaattttact
     5221 aagaaggggg taagggggca gatctgtaac atccgtgcct gtaagggcac taccagagga
     5281 aggcagctcc ataggttagg tagatcactg tatagggtga gatggtttct gtagaaattg
     5341 ttattatact aaccattacg gtggaaatag taccatgttc atcaaacatg tggttatcag
     5401 cctgctcgga aacaaattct acaccggaaa agacaaggtc acgtttgatt atgtgctggc
     5461 tgccaaattg cgtgatgccg gactggcgat cgaacgtaat tatctggttg atatgggcaa
     5521 cggtaagcgc ggattcgtcg atatcatggt cgttgcccca tctggtgaac ggtgcgcgat
     5581 cgaggtggac agagcgtcac cacgggcacg ttcaatactg aaactgcgca gactcaagct
     5641 atacggcatt cctggtatcg tgcttctgcg ctgttcacgt aatccggatc aatacgttag
     5701 cgatgagatc gacgtgatcc cggcaacggg taaatcacgt agcaaggggg cgtcatgctg
     5761 aaaataatcc caaactttgc tcaggagcgc ggtttaaacc agctgcggca ccagtggaaa
     5821 cagcatcgca cgtacctgat gtatgcaccc actggctctg gcaaaactgg tcttgcagca
     5881 ttcgtcaccg ccggaatggt tgaacgtggt atgcgagtga tgtttgtctg tccgtacacc
     5941 atcctgctga accagacagc ggaacgtttc accgaatacg gtttgccgtg ggaagaaatc
     6001 agttttgtat ggcgtgatca ccctaactat gacccgtcac gactgattca gattgccagt
     6061 gccgacacgc tgatccgtcg tgagtttcct aacaacatcg atctgctgat catcgatgaa
     6121 gcacacatga agcgtcgtgc gttacttgag gttatccggg acagagacat cagggttctt
     6181 ggactttccg gtaccccgtt cgcagcctgg atggggaagt actacgaatg cctgatcaag
     6241 cctacaacga ttcgtgaact tattcagcgt ggtgatctga gcgattatga gttttttgcc
     6301 ccctcaatgc ctgatctggc tggcgtaaaa accagtaaca ccgtatttgg acgggattac
     6361 aacgaggagc agctcgcatc catcatgggg agttcggatc tggttggcga tatcgttcgc
     6421 aactggcttg agaatggtga ggatttgccg acgatctgct tctgtgtgaa tgttgcgcat
     6481 gcgaattttg ttacccgtga gtttttacag gccggtattg gcgcagaggt gatgacggca
     6541 gataccctcc atgatgaacg acaggacatc attcgccgtt ttgaagaggg cgtgaccaaa
     6601 ataattgtca acgtcggcgt actggttgcg ggatttgaca gcgatgttcg ctgcctgatc
     6661 tatgcccgtc cgacaaaatc agaaatccgt tggttgcagt gcataggtag agcgttacgt
     6721 acagccccag gtaaacaacg tgcgttgatt ttcgaccatt ctggcacggt tcatcggctg
     6781 ggtttccccg aggatatcga gtatgacgaa ctgccgggca aaaatgacgg aatgaaagcg
     6841 tctgctggcg gtggcgaggt taaagctgaa aaacttccca gagaatgccc caaatgccac
     6901 ttcatgaagc ctgctggtgt acacatgtgt cccaaatgtg ggtttcgtcc tcttggtggc
     6961 gatgatgtgg caacagaccg cgatcgaaaa ctctctcgcg taaacaaagg gaaacgcgaa
     7021 tacagccgcg aggaaaaaca gcggtggtgg agtgagatca agggctatca gaattaccgc
     7081 aacgcgacag gtaagccact gagtgacgga tggtgcgctc atacctacaa agagaagttc
     7141 ggggtgtggc ctaaaggctt cagtaacgcg ccgctgcaaa cctcggttga agtgcacaat
     7201 ttcatcaagt ca
//
LOCUS       DAJVTL010000180         7136 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.182, whole genome shotgun sequence.
ACCESSION   DAJVTL010000180 DAJVTL010000000
VERSION     DAJVTL010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7136)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7136)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7136
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.182"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            26..1159
                     /locus_tag="OQQ26_003939"
     CDS             26..1159
                     /locus_tag="OQQ26_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001571533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HCS1859220.1"
                     /translation="MVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDR
                     YVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMS
                     LLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQS
                     EDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLY
                     QNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKLINDTLGH
                     QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHI
                     APQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS"
     gene            1202..1705
                     /gene="yeaK"
                     /locus_tag="OQQ26_003940"
     CDS             1202..1705
                     /gene="yeaK"
                     /locus_tag="OQQ26_003940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mischarged aminoacyl-tRNA deacylase"
                     /protein_id="HCS1859221.1"
                     /translation="MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
                     TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL
                     VNFRRTA"
     gene            complement(1706..1810)
                     /locus_tag="OQQ26_003941"
     CDS             complement(1706..1810)
                     /locus_tag="OQQ26_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416302.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859222.1"
                     /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG"
     gene            1980..2426
                     /locus_tag="OQQ26_003942"
     CDS             1980..2426
                     /locus_tag="OQQ26_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HCS1859223.1"
                     /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
                     WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
                     VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
     gene            complement(2383..3204)
                     /gene="nimR"
                     /locus_tag="OQQ26_003943"
     CDS             complement(2383..3204)
                     /gene="nimR"
                     /locus_tag="OQQ26_003943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NimR"
                     /protein_id="HCS1859224.1"
                     /translation="MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLI
                     LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTC
                     CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKI
                     RTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG
                     LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVSPQSAKPDPRQ"
     gene            3301..4482
                     /gene="nimT"
                     /locus_tag="OQQ26_003944"
     CDS             3301..4482
                     /gene="nimT"
                     /locus_tag="OQQ26_003944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-nitroimidazole transporter"
                     /protein_id="HCS1859225.1"
                     /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
                     SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
                     LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGASAALGSAMVVPLA
                     LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
                     FLGINSLIYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ
                     RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA
                     ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI
                     R"
     gene            4537..4884
                     /locus_tag="OQQ26_003945"
     CDS             4537..4884
                     /locus_tag="OQQ26_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HCS1859226.1"
                     /translation="MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLPLDEWDKEI
                     TPSTELRKAFHGEVVDFATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQ
                     NHALVLADWLRSL"
     gene            complement(4906..5160)
                     /gene="yoaF"
                     /locus_tag="OQQ26_003946"
     CDS             complement(4906..5160)
                     /gene="yoaF"
                     /locus_tag="OQQ26_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing lipoprotein YoaF"
                     /protein_id="HCS1859227.1"
                     /translation="MKIISFALPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK
                     GGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
     gene            5343..6368
                     /gene="dgcP"
                     /locus_tag="OQQ26_003947"
     CDS             5343..6368
                     /gene="dgcP"
                     /locus_tag="OQQ26_003947"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcP"
                     /protein_id="HCS1859228.1"
                     /translation="MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKV
                     DVEARLQHIMFARNSQKMHIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAAR
                     NLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALV
                     EQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKL
                     INDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERI
                     QQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFV
                     AHPALHS"
     gene            6401..6499
                     /locus_tag="OQQ26_003948"
     CDS             6401..6499
                     /locus_tag="OQQ26_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family small membrane protein"
                     /protein_id="HCS1859229.1"
                     /translation="MRIGIIFPVVIFITAVVFLAWFFIGGYAAPGA"
     gene            6502..6576
                     /gene="yoaJ"
                     /locus_tag="OQQ26_003949"
     CDS             6502..6576
                     /gene="yoaJ"
                     /locus_tag="OQQ26_003949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YoaJ"
                     /protein_id="HCS1859230.1"
                     /translation="MKKTTIIMMGVAIIVVLGTELGWW"
     gene            complement(6635..6883)
                     /locus_tag="OQQ26_003950"
     CDS             complement(6635..6883)
                     /locus_tag="OQQ26_003950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HCS1859231.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG
                     WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS"
     gene            complement(7031..>7136)
                     /locus_tag="OQQ26_003951"
     CDS             complement(7031..>7136)
                     /locus_tag="OQQ26_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
                     /protein_id="HCS1859232.1"
                     /translation="MTLLVQEVAAEVIKDLVNTVRSYDTENEHDVCGW"
BASE COUNT         1758 a         1745 c         1716 g         1917 t
ORIGIN      
        1 aaccgcatcc actgactgcg acacaattgt ggaagctgca gcactattac ccgcttttga
       61 tcaggcagtg gaaggcaacc gccaccagga tgattacggt tcaggtcttg ggatggccga
      121 agagaaattt cactattatc tcgatctcaa tgaccgctat gtctattttt atgagccggt
      181 taatgttgaa tactttgcga tgaataactg gtccttcctg cagtcaggaa gtattggcat
      241 cgatcgcaaa gatattgaaa aggtatttac cgggcgtacc gtattgtcga gcatttacca
      301 ggatcagcgt actaaacaga acgtgatgag tttgctgacg ccggtgtatg ttgcagggca
      361 gctaaaaggg attgtgctgc tggatattaa caaaaacaat ctgcggaata tcttttacac
      421 tcatgaccgc cctctcctct ggcgttttct caatgtcacg ctaactgata ccgattcggg
      481 gcgcgacatt atcatcaacc agagcgaaga taatctgttc cagtatgtca gttacgtcca
      541 tgacttaccg ggcggcattc gtgtctcgtt atccattgat attctttact ttatcacgtc
      601 ttcgtggaaa agcgttctgt tctggatttt gacggcgtta attttgctga atatggtgcg
      661 gatgcacttc cgcttatacc aaaatgtgtc gcgagaaaat attagtgatg cgatgactgg
      721 actgtataat cgcaaaattt taacccctga actggagcag cggttgcaga aactggtgca
      781 atccggttct tcggtgatgt ttattgcaat tgacatggac aagttaaagc taataaatga
      841 caccctcggt catcaggaag gggatttagc gattacgttg ttagctcagg cgattaaaca
      901 atcgattcgt aaaagtgatt atgccatccg actcggtggc gatgaattct gcatcattct
      961 tgtcgattcg acgccgcaaa ttgcagcaca actgcctgaa cgtatcgaaa aacgtctgca
     1021 acatatcgcg ccgcagaaag agatcggctt ctcttccggt atttacgcga tgaaagaaaa
     1081 cgatacgtta catgatgcgt ataaagcttc cgatgagcgt ttatatgtca ataagcagaa
     1141 caaaaacagc cgttcatgat aaccttctgt ggttgtttgc ttgtaatctc aggagcatga
     1201 aatgactgaa atggctaaag gaagcgtgac gcatcagcgg ttaatcgctt tattatcaca
     1261 agaaggtgct aacttccgcg tcgttaccca tgaagcggta ggtaaatgtg aagcggtgtc
     1321 agaaattcgt ggcaccgctt taggccaggg agctaaggca ctggtatgta aagtcaaagg
     1381 caatggcgta aatcaacatg ttctggcgat cctcgctgcc gatcaacagg ccgatctgag
     1441 ccaacttgcc agccatatag gcggattacg cgcttcgtta gccagccctg ctgaagtcga
     1501 tgaactcaca ggctgtgtct tcggcgcgat cccccctttc agcttccatc caaaactcaa
     1561 actggttgcc gaccctctac tcttcgaacg atttgatgaa atcgccttca atgcagggat
     1621 gctggataaa tccgttattt tgaaaaccac ggattatttg cgcattgcgc aaccagaact
     1681 ggtcaatttc cgccgcactg cgtaactagc ctgtccgttc aataagcaga acggacaaaa
     1741 ccagcacaac agcaatggca aaaaacgatg acgtgataat cagtgtctcg acgaacattt
     1801 gatcgttcat agtatgcccc cgggagatag ctgttttcac gttattgtta gcgtacacaa
     1861 atggcagttt gatgacagtt cgcctgattt tttatgcaaa aaacgtaaag attttctact
     1921 tccttcctgc ggcaagcgta aagtaagcag gcttattatt ttttggcaag gaaaccacga
     1981 tgtttgatgt cactttgctg atcctgctcg ggttagctgc gctgggcttt atcagtcata
     2041 acaccactgt cgccgtttca attctggtgt tgatcattgt ccgcgtcaca ccgttaagca
     2101 cctttttccc gtggattgaa aaacaggggc taagtatcgg gataatcatt ctgacgattg
     2161 gcgttatggc ccccatcgcc agcgggacgc taccgccctc aaccttgatt cactcgtttc
     2221 tgaactggaa atcgctggtg gcaattgcag taggcgtgat tgtctcctgg ctgggtgggc
     2281 gcggcgtgac cttaatgggc agccagccgc aactggtcgc cgggctgctg gtaggcactg
     2341 ttttaggcgt ggcgctgttt cgcggcgtac cggtcggccc gcttattgcc gcgggtctgg
     2401 tttcgctgat tgtggggaaa cagtagttaa tcccgcaata tatcggcctg gcgtttgccc
     2461 caggcctttc ttaaacatag taataaaggc cgttgttgaa tcatacccca gcgtatgagc
     2521 aactttctgt acagtatcgc ctttcactaa tccctgaagt gccataatca gctgtaactg
     2581 ctgacgccac tggcgaaaac tcaaccccgt ctcttttact atcagtcgcg caagattgcg
     2641 ttcactcatc gcaaaaaagc cagcccattg ccctaatgcc ccccactcga cgggcccttt
     2701 cgccatcatc tccaccatcg tgcggatttt aggatgagaa gaaacgggca ggtgcagctg
     2761 ttgttgtggc tgctgaggga gttcatcaaa caggacctga attaatctgc gggtcatcgg
     2821 ctcagcacgc tgagtcgtcg tcctgtttgc cagggttaaa atcaattccc ggcataaggg
     2881 cgatattttc aatgtgcaac atgtcgtcgg cattgtcact gcgctgggtt cgataaacag
     2941 aaaacagagt tcagcgttag ctgtcacttg attgctatgt tccaccccgc ccggtatcca
     3001 aaccgcatat tgcggcggca ccatccacaa agcattttcc accgtacagg taattgcacc
     3061 atgtagcgcc agtatcagct gtcctttgcg gtgctgatgt acaggactgg ttaactcatc
     3121 cgttccggcg tgaatacaaa atgcgaccgc ggcttcatgg tgtcggtcgg gttcatagcc
     3181 attgagattc aacctgtgca tcattttgtc cgaatttagc gataatttgt cattttagct
     3241 tgattcaaca taacaataaa aacggtaagg tacagcctcg tttgtaacaa tgagaagcat
     3301 atgacctgtt caacttcatt aagcggcaaa aacaggattg tccttatcgc tggcattctg
     3361 atgattgcca caacattacg cgtcaccttt accggcgcag caccgttact ggatacgatt
     3421 cgttccgctt actcgctgac gacagcgcaa accggcttat tgaccaccct gccattattg
     3481 gcctttgcgc taatctcacc tttggccgcc ccggtagcgc gacgttttgg tatggaacgt
     3541 agcctgtttg ccgcgttact tttgatctgt gctggtatcg caattcgctc tctcccttcg
     3601 ccttacttat tatttggcgg tacagcggtc attggcggtg ggattgcatt aggcaatgtc
     3661 ttactgccag gattaattaa acgcgatttc cctcattccg tcgccagact taccggcgca
     3721 tattccctga caatgggagc ttcggcggca ctgggatcgg ctatggtagt gccactggct
     3781 ttgaacggtt ttggctggca aggcgcgttg ctcatgctga tgtgttttcc tctgctggct
     3841 ctttttttat ggctgccaca gtggcgaagc caacaacatg caaatttgag tacctcgcgc
     3901 gccttacata ctcggggtat ctggcgttcg ccgcttgcct ggcaggtaac attgtttctt
     3961 gggatcaact cactgatcta ttacgtgatt attggctggc ttccggcgat cctcatcagt
     4021 cacggctata gcgaagcaca ggcgggttca ctgcatggtt tgctgcaact agccacagca
     4081 gcgcccggtt tgctgattcc acttttctta catcatgtga aagatcagcg tggtattgca
     4141 gcgttcgttg ccttgatgtg cgcagtgggc gcggttgggc tctgctttat gccagcgcac
     4201 gcgatcacct ggactctgct tttcggtttt ggttccggcg caacaatgat actggggttg
     4261 acgttcattg gtcttcgggc aagttctgcg catcaggcgg cggcactctc ggggatggca
     4321 caatccgtcg ggtatttgct ggcagcctgt gggccgccgc tgatgggtaa aatacacgat
     4381 gctaacggta actggtctgt accactgatg ggtgttgcca tactttcact actgatggcg
     4441 attttcggac tttgcgccgg gagagacaaa gaaattcgct aatatccggt gctatagtga
     4501 cgtgacaaat catgcgtgaa agggagaaca aacacgatga atattcagtg caaacgcgtt
     4561 tatgatccgg ctgaacagag cgatggttat cgcgtactgg tcgaccgcct ctggccgcgc
     4621 ggtatcaaaa aaaccgattt accccttgat gagtgggata aagaaatcac gccgtcaacg
     4681 gaactgcgca aagcctttca cggcgaagtc gtcgattttg caacctttcg cgagcaatat
     4741 cttgcagaac tggcgcaaca cgagcaagaa ggaaagcggc tggcggacat cgccaaaaaa
     4801 cagccgctga ccctgctcta cgcagccaaa aacaccacgc agaaccatgc gctggtgctg
     4861 gccgactggc tacgtagctt gtgattttag tacagcatcc ggcggttatt tttcaccagc
     4921 cggatggtcc cgtcgccaca atgcccattc atcaatcgtt tcaccgcccg gtaatttgca
     4981 attgttgctg accccttgcg ctgtctgcac tggaatgagc gtcccgccct tctgctggca
     5041 atagaccgac gccggatttg ccataccaat ctgcggcggt ttaggtgctt ctggctgaga
     5101 aggggttgaa caaccagcca ggaccagcaa gcaaggcaaa gcaaaactga taattttcat
     5161 ttattggtct cacacattta tctacgctta gagtatcgcg gtatcgtttt gttttgcagc
     5221 actattttta ttacattcac tcaaaacata ttacgtcttg tttcatcttt gttgatgatg
     5281 ttttatcatg cctgcaaaga ttaaataatc agcatttacc cgccgtatcc tggagttgtt
     5341 ccgtgtcaga tcagattatc gcccgcgtct cgcaatccct tgccaaagaa cagtcactgg
     5401 aaagtctggt ccgacagctt ctggagatgc tggaaatggt cactgatatg gaatcaacct
     5461 acctgaccaa agtggatgtc gaagcgcgcc tgcagcatat tatgtttgcc cgtaacagcc
     5521 agaaaatgca catcccggag aattttaccg tctcgtggga ttactcgtta tgcaaacgcg
     5581 ccattgatga aaactgcttt ttcagcgatg aagtccctga ccgttggggc gactgtattg
     5641 cggcacgcaa tcttggcatc accacatttc tgagcacgcc aattcactta ccggatggat
     5701 cattctatgg cacgctttgc gccgccagca gtgagaagcg ccagtggagt gaacgcgcgg
     5761 aacaggtttt acagttattc gccggactga ttgcacaata tattcaaaaa gaggcgctgg
     5821 ttgaacagct gcgcgaagcc aatgccgcgc tgattgcgca atcgtatacc gactcgttaa
     5881 ccgggctacc gaatcggcgg gcgatttttg aaaatctgac gacactgttt tccctcgccc
     5941 ggcatcttaa ccataagata atgatcgcgt ttatcgatct ggataacttc aaattaatca
     6001 atgatcgttt tggtcataat agtggcgatc tgtttctcat tcaggttggc gagcgcctta
     6061 atacgctcca acaaaatggc gaagttattg gtcgtctcgg cggtgatgag tttttggttg
     6121 tttcactaaa caacgagaat gcggatattt cgtcgctgcg agaacgcatt cagcagcaaa
     6181 tacgcggaga atatcactta ggtgatgttg atttgtatta tcctggtgcc agtcttggca
     6241 tagtagaagt cgatcctgaa acgaccgatg cagacagtgc cctgcatgct gccgatattg
     6301 cgatgtatca ggagaaaaaa cacaaacaga aaacaccttt tgtcgcgcat ccagcgctac
     6361 attcctgagg cgtattcaca tccttttgat tggtgataac atgcgaattg gtattatttt
     6421 tccggttgta atcttcatta cagcggtcgt atttttagca tggtttttta ttggcggcta
     6481 tgctgccccg ggggcataaa gatgaaaaaa acaacgatta ttatgatggg tgtggcgatt
     6541 attgtcgtac tcggcactga gctgggatgg tggtaacgtc acctctaaaa aatagcaaag
     6601 gctgcctgtg tgcagccttt gtgcaattta cgcgttaact tttaatcttc cggtagataa
     6661 atagcacgac aatcgcacca ataacggcaa ccacgaagct gccaaaattg aagccatcga
     6721 ctttaccaaa gccaaacagc gtactgatcc atccgccgac tacggcaccg actatcccca
     6781 gcaggatagt cataaagaat ccaccaccat ctttacctgg catgatccac ttcgccagaa
     6841 taccggcaat aagcccaaaa ataatccatg acagaatgcc cattgtttcc tcacttatct
     6901 gttttgcatt agcgggttag tcgctgataa aaagcatagc acaacatcgg gagggcaaga
     6961 tttgtgacga gcatcacgga ggattttttt gcgatggcac agaaattgcg ccatcaacga
     7021 tcagtgataa ttaccaacca caaacatcat gttcgttttc cgtatcataa gaacgcacgg
     7081 tattcaccag atcttttatc acttcagccg ccacttcttg caccagcaaa gtcatc
//
LOCUS       DAJVTL010000181         7065 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.183, whole genome shotgun sequence.
ACCESSION   DAJVTL010000181 DAJVTL010000000
VERSION     DAJVTL010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7065
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.183"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            11..1411
                     /gene="gspA"
                     /locus_tag="OQQ26_003952"
     CDS             11..1411
                     /gene="gspA"
                     /locus_tag="OQQ26_003952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000900174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspA"
                     /protein_id="HCS1859233.1"
                     /translation="MLGEAGSGKTWLAQQLQKDKHRRVITLSLVISWQGKAAWIVTDD
                     NAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLI
                     PDGQFLLLGRPDRKVERDFKKQGIELVSTGPLTEHELKASILEGQNIDQPDLLLTARV
                     LKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRPRKMQLAV
                     VMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVL
                     YGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVV
                     RVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITCDSSEEEILWLE
                     TMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYL
                     YRDEANISPETTVKGK"
     gene            1413..1832
                     /gene="gspB"
                     /locus_tag="OQQ26_003953"
     CDS             1413..1832
                     /gene="gspB"
                     /locus_tag="OQQ26_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative general secretion pathway protein GspB"
                     /protein_id="HCS1859234.1"
                     /translation="MFEFYIAAREQKETGHPGIFSRQKYSTIIYVICLLLICLWFAGM
                     VLVGGYARQLWALWIVKAEVTVEAETPAFKQSTQHYFFKKQPIPVVESVEEEDDPDVA
                     VENAPSSSEDEENTVEESDEKAGLRERVKNALNELER"
     gene            2070..2381
                     /gene="rpsJ"
                     /locus_tag="OQQ26_003954"
     CDS             2070..2381
                     /gene="rpsJ"
                     /locus_tag="OQQ26_003954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HCS1859235.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            2414..3043
                     /gene="rplC"
                     /locus_tag="OQQ26_003955"
     CDS             2414..3043
                     /gene="rplC"
                     /locus_tag="OQQ26_003955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HCS1859236.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
     gene            3054..3659
                     /gene="rplD"
                     /locus_tag="OQQ26_003956"
     CDS             3054..3659
                     /gene="rplD"
                     /locus_tag="OQQ26_003956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HCS1859237.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            3656..3958
                     /gene="rplW"
                     /locus_tag="OQQ26_003957"
     CDS             3656..3958
                     /gene="rplW"
                     /locus_tag="OQQ26_003957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HCS1859238.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            3976..4797
                     /gene="rplB"
                     /locus_tag="OQQ26_003958"
     CDS             3976..4797
                     /gene="rplB"
                     /locus_tag="OQQ26_003958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HCS1859239.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            4814..5092
                     /gene="rpsS"
                     /locus_tag="OQQ26_003959"
     CDS             4814..5092
                     /gene="rpsS"
                     /locus_tag="OQQ26_003959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HCS1859240.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            5107..5439
                     /gene="rplV"
                     /locus_tag="OQQ26_003960"
     CDS             5107..5439
                     /gene="rplV"
                     /locus_tag="OQQ26_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HCS1859241.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            5457..6158
                     /gene="rpsC"
                     /locus_tag="OQQ26_003961"
     CDS             5457..6158
                     /gene="rpsC"
                     /locus_tag="OQQ26_003961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HCS1859242.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            6171..6581
                     /gene="rplP"
                     /locus_tag="OQQ26_003962"
     CDS             6171..6581
                     /gene="rplP"
                     /locus_tag="OQQ26_003962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HCS1859243.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            6581..6772
                     /gene="rpmC"
                     /locus_tag="OQQ26_003963"
     CDS             6581..6772
                     /gene="rpmC"
                     /locus_tag="OQQ26_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HCS1859244.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLNEKAGA"
     gene            6772..7026
                     /gene="rpsQ"
                     /locus_tag="OQQ26_003964"
     CDS             6772..7026
                     /gene="rpsQ"
                     /locus_tag="OQQ26_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HCS1859245.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
BASE COUNT         1864 a         1644 c         1917 g         1640 t
ORIGIN      
        1 tctgtgctat ttgttgggtg aggctggaag tggaaaaacc tggctggcgc agcaactaca
       61 aaaagataaa catcgccgtg tgattacttt aagcctcgtt atttcctggc aaggtaaggc
      121 cgcatggatc gttaccgacg ataacgcggc tgaacagggc tgccgtgaca gcgcctggac
      181 gcgagatgag atggcggggc aattactgca tgcgcttcat cgaactgata gtcgctgccc
      241 tcttattatt attgaaaatg ctcacctgaa tcaccgccgc atacttgatg atctccaacg
      301 cgcgatatct cttattcctg acggtcaatt tttgctgctc ggcagacccg atcgaaaagt
      361 cgaacgagat tttaaaaaac agggcattga acttgtctcg acaggacctc tgacggagca
      421 cgaacttaag gctagtatcc ttgaaggtca gaatattgac caacccgatc tccttttaac
      481 cgccagagtt ctgaaacgga tcgctttatt atgtcggggc gatcgcagaa agctggcgct
      541 tgccggcgaa acaattcgct tattacagca agccgagcag accagcgttt tcacagcaaa
      601 acaatggcga atgatttacc gcatattggg tgataaccgc ccccggaaaa tgcagcttgc
      661 cgtggtgatg agtggaacca ttatcgctct tacctgtggt tggctactgc tgtcctcttt
      721 tacagctacg ttacccgttc ctgcgtggct gatacccgta acgccagtag ttaaacaaga
      781 tatgactaag gatattgctc atgtggtgat gcgcgatagt gaggcgctaa gcgtgttata
      841 cggcgtatgg gggtacgagg tcccagctga ttcggcctgg tgcgatcagg cagtaagagc
      901 ggggctggca tgtaaaagtg ggaatgcttc tttacaaaca ttggtagatc agaatttgcc
      961 ctggatcgca tcgcttaaag tcggggacaa aaaattgcct gttgtggtcg ttcgcgtcgg
     1021 tgaggctagc gttgatgtcc tcgtaggtca gcaaacgtgg acgctgacac ataaatggtt
     1081 tgagtcggta tggacgggtg attatcttct gttgtggaaa atgtcgccgg aaggggagag
     1141 taccattacg tgtgatagca gcgaggaaga gattctctgg ctggaaacga tgttaaaccg
     1201 tgcattgcat atttcgacag aaccttcggc ggagtggcgt cccttgttgg tagaaaaaat
     1261 aaagcaattt caaaaaagcc accacttgaa aactgacggt gttgttggct tttcaacgtt
     1321 agtacatctc tggcaggtgg caggggagag tgcctactta tatcgggatg aagcaaatat
     1381 ttccccggaa acaacagtga aggggaaatg acatgtttga attctatatc gccgcgcgtg
     1441 agcagaaaga aacaggtcac cctggtatct tctcccgaca aaaatacagc accataatat
     1501 atgtcatttg tttattgctg atttgcctgt ggtttgcagg aatggtgttg gttggtgggt
     1561 atgccaggca gctatgggcg ctttggatag taaaagcaga agtcactgta gaggctgaaa
     1621 cgcccgcttt taaacaatca acacaacact atttcttcaa aaaacagcca atccccgtcg
     1681 tcgaatccgt cgaggaggaa gatgacccag acgtcgcggt tgagaatgct ccctcttctt
     1741 ctgaagacga agaaaatact gtagaagaaa gcgacgagaa agccggttta agagagcgtg
     1801 tcaaaaatgc gctgaacgaa cttgagagat aacccgaagg ctgtttactt tactagcaat
     1861 acgcttgcgt tcggtggtta agtatgtata atgcgcaggc ttgtcgtagt tgacagcagg
     1921 ttcaatctga acctcagtta gccgaatttg gctacctaac aatgctccca atcggggagc
     1981 tacgtaagaa cggttacact ctcccatcaa tcgtaatggg gctgaggagt aatcattttc
     2041 gtttataaaa taattggagc tctggtctca tgcagaacca aagaatccgt atccgcctga
     2101 aagcgtttga tcatcgtctg atcgatcaag caaccgcgga aatcgtcgag actgccaagc
     2161 gcactggtgc gcaggtccgt ggtccgatcc cgctgccgac acgcaaagag cgcttcactg
     2221 ttctgatctc cccgcacgtc aacaaagacg cgcgcgatca gtacgaaatc cgtactcact
     2281 tgcgtctggt tgacatcgtt gagccaaccg agaaaaccgt tgatgctctg atgcgtctgg
     2341 atctggctgc cggtgtagac gtgcagatca gcctgggtta atcaggtcat tgagcgattg
     2401 agaggttgaa acaatgattg gtttagtcgg taaaaaagtg ggtatgaccc gtattttcac
     2461 agaagacggc gtttctatcc cagtaaccgt aatcgaagtt gaagcaaacc gcgttactca
     2521 ggttaaagac ctggctaacg atggctaccg tgctattcag gtgaccaccg gtgctaaaaa
     2581 agctaaccgt gtgaccaagc ctgaagctgg ccacttcgct aaagctggcg tagaagctgg
     2641 ccgtggtctg tgggaattcc gcctggctga aggcgaagag ttcactgtag gtcagagcat
     2701 tagcgttgaa ctgtttgctg acgttaaaaa agttgacgta actggcacct ctaaaggtaa
     2761 aggtttcgca ggtaccgtta agcgctggaa cttccgtacc caggacgcta ctcacggtaa
     2821 ctccttgtct caccgcgttc cgggttctat cggtcagaac cagactccgg gcaaagtgtt
     2881 caaaggcaag aaaatggcag gtcagatggg taacgaacgt gtaaccgttc agagccttga
     2941 cgtagtacgc gttgacgctg agcgcaacct gctgctggtt aaaggtgctg tcccgggtgc
     3001 aaccggtagc gacctgatcg ttaaaccagc tgtgaaggcg taaggagata gcaatggaat
     3061 tagtattgaa agacgcgcag agcgcgctga ctgtttccga aactaccttc ggtcgtgatt
     3121 tcaacgaagc gctggttcac caggttgttg ttgcttatgc agctggtgct cgtcagggta
     3181 ctcgtgctca aaagactcgt gctgaagtaa ctggttccgg taaaaaaccg tggcgccaga
     3241 aaggcaccgg ccgtgcgcgt tctggttcta tcaagagccc gatctggcgt tctggtggcg
     3301 tgacctttgc tgctcgtccg caggaccaca gtcaaaaagt taacaagaag atgtaccgcg
     3361 gcgcgctgaa aagcatcctg tccgaactgg tacgtcagga tcgtctgatc gttgtcgaga
     3421 agttctctgt agaagcgccg aaaactaagc tgctggcaca gaaactgaaa gacatggctc
     3481 tggaagatgt gctgatcatc accggtgagc tggacgaaaa cctgttcctg gctgcgcgca
     3541 acctgcacaa ggttgacgta cgcgatgcaa ctggtatcga cccggttagc ctgatcgcct
     3601 tcgacaaagt cgtaatgact gctgatgctg ttaagcaagt tgaggagatg ctggcatgat
     3661 tcgtgaagaa cgtctgctga aggtgctgcg tgcaccgcac gtttctgaaa aagcgtctac
     3721 tgcgatggaa aaatccaaca ccatcgtact caaagttgct aaagacgcga ccaaagcaga
     3781 aatcaaagct gctgtgcaga aactgtttga agtcgaagtc gaagtcgtta acaccctggt
     3841 agttaaaggg aaagttaaac gtcacggaca gcgtatcggt cgtcgtagcg actggaaaaa
     3901 agcttacgtc accctgaaag aaggccagaa tctggacttc gttggcggcg ctgagtaagt
     3961 cggaggagta atacaatggc agttgttaaa tgtaaaccga catctccggg tcgtcgccac
     4021 gtagttaaag tggttaaccc tgagctgcac aagggcaaac cttttgctcc gttgctggaa
     4081 aaaaacagca aatccggtgg tcgtaacaac aatggccgta tcaccactcg tcatatcggt
     4141 ggtggccaca agcaggctta ccgtattgtt gacttcaaac gcaacaaaga cggtatcccg
     4201 gcagttgttg aacgtcttga gtacgatccg aaccgttccg cgaacatcgc gctggttctg
     4261 tacaaagacg gtgaacgccg ttacatcctg gcccctaaag gcctgaaagc tggcgaccag
     4321 attcagtctg gcgttgatgc tgcaatcaaa ccaggtaaca ccctgccgat gcgcaacatc
     4381 ccggttggtt ctactgttca taacgtagaa atgaaaccag gtaaaggcgg tcagctggca
     4441 cgttccgctg gtacttacgt tcagatcgtt gctcgtgatg gtgcttatgt caccctgcgt
     4501 ctgcgttctg gtgaaatgcg taaagtagaa gcagactgcc gtgcaactct gggcgaagtt
     4561 ggcaatgctg agcatatgct gcgcgttctg ggtaaagcag gtgctgcacg ctggcgtggt
     4621 gttcgtccga ccgttcgcgg taccgcgatg aacccggtag accacccaca tggtggtggt
     4681 gaaggtcgta actttggtaa gcacccggta actccgtggg gcgttcagac caaaggtaag
     4741 aagacccgca gcaacaagcg tactgataaa ttcatcgtac gtcgccgtag caaataattt
     4801 tagaggataa gccatgccac gttctctcaa gaaaggtcct tttattgacc tgcacttgct
     4861 gaagaaggta gagaaagcgg tggaaagcgg agacaagaag cccctgcgca cttggtcccg
     4921 tcgttcaacg atctttccta acatgatcgg tttgaccatc gctgtccata atggtcgtca
     4981 gcacgttccg gtatttgtaa ccgacgaaat ggtcggtcac aaactgggtg aattcgcacc
     5041 gactcgtact tatcgcggcc acgctgctga taaaaaagcg aagaagaaat aaggtaggag
     5101 gaagagatgg aaactatcgc taaacatcgc catgctcgtt cttctgctca gaaggttcgc
     5161 cttgttgctg acctgattcg cggtaagaaa gtgtcgcagg ctctggatat tttgacctac
     5221 accaacaaga aagcggctgt actggtcaag aaagttctgg aatctgccat tgctaacgct
     5281 gaacacaacg atggcgctga cattgacgat ctgaaagtta cgaaaatttt cgtagacgaa
     5341 ggcccgagca tgaagcgcat tatgccgcgt gcaaaaggtc gtgcagatcg catcctgaag
     5401 cgcaccagcc acatcactgt ggttgtgtcc gatcgctgag actctggaga ctagcaatgg
     5461 gtcagaaagt acatcctaat ggtattcgcc tgggtattgt aaaaccatgg aactctacct
     5521 ggtttgcgaa caccaaagaa ttcgctgaca acctggacag cgattttaaa gtacgtcagt
     5581 acctgactaa ggaactggct aaagcgtccg tatctcgtat cgttatcgag cgtccggcta
     5641 agagcatccg tgtaaccatc cacactgctc gcccgggtat cgttatcggt aaaaaaggtg
     5701 aagacgtaga aaaactgcgt aaggtcgtag cggacatcgc tggcgttcct gcacagatca
     5761 acatcgccga agttcgtaag cctgaactgg acgcaaaact ggttgctgac agcatcactt
     5821 ctcagctgga acgtcgcgtt atgttccgtc gtgctatgaa gcgtgctgta cagaacgcaa
     5881 tgcgtctggg cgctaaaggt attaaagttg aagttagcgg ccgtctgggc ggcgcggaaa
     5941 tcgcacgtac cgaatggtac cgcgaaggtc gcgtaccgct gcacactctg cgtgctgaca
     6001 tcgactacaa cacctctgaa gcgcacacca cttacggtgt aatcggcgtt aaagtgtgga
     6061 tcttcaaagg cgagatcttg ggtggtatgg ctgctgttga acaaccggaa aaaccggctg
     6121 ctcagcctaa aaagcagcag cgtaaaggcc gtaaataagg agcgtcgctg atgttacaac
     6181 caaagcgtac aaaattccgt aaaatgcaca aaggccgtaa ccgcggtctg gcgcagggta
     6241 cggatgttag cttcggcagc ttcggtctga aagctgttgg ccgtggtcgt ctgactgccc
     6301 gtcagatcga agcagcacgt cgtgctatga cccgtgcagt taagcgtcaa ggtaagatct
     6361 ggatccgtgt gttcccggac aaaccgatca ctgaaaagcc gctggcagtg cgtatgggta
     6421 aaggtaaagg taacgtggag tattgggttg ccttgattca gccgggtaaa gtcctgtatg
     6481 aaatggacgg tgttccggaa gagctggccc gtgaagcatt caagctggca gcagcgaaac
     6541 tgccgattaa aaccaccttt gtaactaaga cggtgatgta atgaaagcaa aagagctgcg
     6601 tgagaagagc gttgaagagc tgaacaccga gctgctgaac ctgctgcgtg agcagttcaa
     6661 cctgcgtatg caggctgcaa gtggccagct gcaacagtct cacctgttga agcaagtgcg
     6721 tcgcgatgtc gcacgcgtta agactttact gaacgagaag gcgggtgcgt aatgaccgat
     6781 aaaatccgta ctctgcaagg tcgcgttgtt agcgacaaaa tggagaaatc cattgttgtt
     6841 gctatcgaac gttttgtgaa acacccgatc tacggtaaat tcatcaagcg tacgaccaaa
     6901 ctgcacgtac atgacgagaa caacgaatgc ggtatcggtg acgtggttga aatccgcgaa
     6961 tgccgtccgc tgtccaagac taaatcctgg acgctggttc gcgttgtaga gaaagcggtt
     7021 ctgtaataca gtacactctc tcgatacgaa taaacggctc agaaa
//
LOCUS       DAJVTL010000182         7010 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.184, whole genome shotgun sequence.
ACCESSION   DAJVTL010000182 DAJVTL010000000
VERSION     DAJVTL010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7010
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.184"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..686)
                     /locus_tag="OQQ26_003965"
                     /pseudo
     CDS             complement(1..686)
                     /locus_tag="OQQ26_003965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            938..2407
                     /locus_tag="OQQ26_003966"
     CDS             938..2407
                     /locus_tag="OQQ26_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001616049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1859246.1"
                     /translation="MHIDSTEKNNKQKLGLLALTSIVVSSMIGSGVDGLPQNMAENSA
                     VGPVAIAWIVCGIGMFFISRTFIVLSNIRPDLQSGVYMYAREGFGRFTAFNVAWGYWL
                     MTIFSNVAFAIMVMDTLNYFLPGDFKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSI
                     NIVGTLAKLIPLVAFIIILMLFMKYTTFADNVWGHSASKASQDLGSIFSQVTSPLSVA
                     LWSFIGVEGAVALSGRAKNKRDVGKATFIGFVVSLIICLLVSILPFGVLTQHELSAIP
                     TPSTAGILKIVVGEWGKIMIILGVLISVLTSWLAWTIICAELPMVAAQNGTFPKPFSK
                     KNVKGSASVSLYISSAFMQIVVLLVYFSTDAWLAMLAISTLTVLPAYLMTTAYLFKLC
                     ISGEYASYTTNHSRSAALVSSIIGFVFCLFMFYASEIKYLAMVPVLLTLGVPLFIWAR
                     KKDDRADKIFTLRELAFFILLLVLDIIVFILLHYKTIHF"
     gene            2512..4881
                     /locus_tag="OQQ26_003967"
     CDS             2512..4881
                     /locus_tag="OQQ26_003967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000671167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HCS1859247.1"
                     /translation="MKFNHNLLFISSQYLDGDNPSQQVLEELQTELAERGFKIHITHQ
                     ISDGLKIIEKSPQYSGIGFYWEPDNPTFAEELQHFISIFRKRNATTPLIIFSEQNITD
                     RIPLDVLKEVSEYVYLFSESAAFTANRLYSLVHRYADKLLPPYFKTLKDFTEDGDYYW
                     DCPGHMGGMAYLKHPVGIEFINFFGENMMRADIGVATAEMGDYLIHAGPPKKSEEIAA
                     RLFGSDWTFYGVSGSSGSNRIVAQAAVGADEIAIIDRNCHKSLNHGLTLSQARPVYLK
                     PTRNAWGLIGPIPTGRLKKASIDALVANSRLASGAVSQSPSYAVVTNCTYDGFCYNVN
                     DVVRHLGESAPRIHFDEAWYAYARFHPLYQSRYAMDAEETPNRPTLFAVQSTHKMLPS
                     LSMASMIHVKKSERAPLNFDDFNDAFMMHGTTSPYYPIIASIDVAVSMMEGESGYSLV
                     QESIEEAIAFRKAVVSVKRQLQEQEGGDAWFFDVLQPTEVQDSDSGQRYSFEEAPVSL
                     LSHSADCWSLRSGERWHGFADDDLVETNSMLDPVKVTLTCPGIGPKGEYQKNGIPGYL
                     LTRFLDDRRIEIARTGDYTVLILFSVGITKGKWGTLIESLLAFKKHYDNDDLATDAIP
                     SLKAHSPHYDTLTLKELCQTMHEKMDELELMSHINDAVNTDPEPVMTPAEAYQKVVRY
                     KTEHIRLDDFSGRIAASMLVPYPPGIPVLMPGERMPQGNKGIIGYLRALQEFDKQFPG
                     FEHEIQGVNVDENGDFWVRAIVEEERDGQSLPGHITFKRQVSGIKKGRQ"
     gene            4956..6455
                     /locus_tag="OQQ26_003968"
     CDS             4956..6455
                     /locus_tag="OQQ26_003968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1859248.1"
                     /translation="MAEQSSDVKNSDNSAGGHKLGLISLIAIVVSSMLGGGVFSLPQN
                     TAASSALGPVIIAWIIAGIGIYFIANSFRVLSDLRPDLQAGVYMYAQEGFGSFIGFNV
                     AWGYWLMTAFGNVAFAVILMDAFNQFMPGVFTDGNNLNSIICGSVLIWGYNFLVLSGT
                     KVAGFVNTLGTIAKLVPLILFVLLLGVLIDYSDLFKNFWGESPAILSGNGNDAAPVSL
                     LSQILAPMTVTLWAFIGVEGAVVLSGRAKNKQDVGKATLIGFLLALIIYMLMSILPFG
                     VMPQAELAQVSNPSTAGVLAHVVGQWGDWLMSAGLIISVLAGWLAWTMLCAEIPMVAG
                     QKGAFPRAFARTNSKQAANVSLWVSSFVMQAAMLLVYFSNNAWTTMYNISALMVVPAY
                     ITTTLYLTRICRNGKYDQYAKKGRRLALSSGVLGSLFCLFILYASQIEYVALIPILLT
                     CGLPVFIWSRKEKNDGQPIFTKKELIYLIMLLLCDIIVVALFIGGYLKV"
     gene            6598..7010
                     /locus_tag="OQQ26_003969"
                     /pseudo
     CDS             6598..7010
                     /locus_tag="OQQ26_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT         1698 a         1692 c         1759 g         1861 t
ORIGIN      
        1 atatgtgttt ttcgataaat gctccgatca ctttttcgtg gatctcaact gagcgtgaga
       61 agcagattgt ttacgagcca accgcttaat gtgggtgcgt agcgtcagat tattacgctc
      121 aatgcgttgg gtgaatattt tgccggtcag atgcttattc ttcggcacca cccggccata
      181 gctgtcccag tcatcgctgg tgagcatgcc gatgttgaag ggtgtaagca gtgccagtag
      241 ctcccggcac gtttgatcgg ttcggggacc aaaagtgtag gccagtacac cgcctgtttt
      301 ggtgttgtac gcgtaccaga gccagtgtag ccgggcttta ctgccaacgt agctccattg
      361 ctcatcaagc tcgcagataa gcgccacatc agcatgggca acaggcgaag aagttatttg
      421 cgttggcgcg agttttttaa agtccggatg atggtgttaa taccaatttt cagtgtcctg
      481 gcggtatcgc gaaccccggc accattaaag gccatttcag tgatcatctc tttcataccc
      541 ggcttccgtg cttgataagt ataagtgagc tgaaacacac ggtggcagtc acggcagcga
      601 aatctgtcac ggcctttagg gttctgacca tggcggtaaa cctgagctga ctgacaacgg
      661 ggacaatgaa tattaacgct ggccatgaga taacctcaaa agcccgtatt atacatcaga
      721 ttcaaccaat tagaggcatc accctttcct acattcgtag gactttgatt acatatagca
      781 agggttaatt cttatataca tagaataaat taggaatata atgaatttta tcgtgacgac
      841 cttatttata attaatttat atcgtcagag aaattagtgt ccacaacatg aagccttaca
      901 aagagattct atgatttaaa aaaataagag ccagcttatg catatcgatt cgactgaaaa
      961 aaataataaa caaaagttgg gcttgcttgc gctaacatcc attgtcgtga gctcgatgat
     1021 cggcagcggc gttgacggac tcccccagaa tatggcggag aattctgccg tgggcccggt
     1081 ggcgatagca tggatagtct gtggtatcgg catgtttttc atctccagaa cttttatcgt
     1141 gctgtcaaac attagacctg atctccagtc aggagtttat atgtatgccc gggaagggtt
     1201 cggccgattt acggcattta acgtcgcctg gggctactgg ctgatgacta tattcagcaa
     1261 cgtcgccttt gccattatgg tgatggatac gctgaattat ttcttaccag gtgatttcaa
     1321 gggagggaac aatattcctt ccgttatcgg tgcctctttg ctgatatggg gattcaactt
     1381 tttagtcctc tccggtaccc gcattgccgg gtcgattaac atcgtcggca cgctggccaa
     1441 actgatcccg ctggtggcct ttattattat tctcatgctg tttatgaagt acaccacgtt
     1501 cgcagataac gtctgggggc acagcgcgag taaggccagt caggacctag gctctatttt
     1561 ctcacaggta acttcaccgc ttagcgtggc actctggagc ttcatcggcg ttgagggggc
     1621 tgtcgctctt tccggtcggg ccaaaaataa acgcgacgtg ggtaaagcca cattcattgg
     1681 cttcgttgta tcactgatta tctgtctgct ggtctccatc ctgccgtttg gcgtgctgac
     1741 tcaacatgag ctcagcgcaa ttccaacccc atccaccgcc ggtattctga agattgttgt
     1801 cggtgaatgg gggaagatta tgattatctt gggggtgctg atttcggtgc ttaccagctg
     1861 gctggcgtgg accatcatct gcgccgaact gcctatggtg gccgcgcaga acggcacatt
     1921 cccgaaaccg ttcagcaaaa aaaatgtgaa gggttcggcc tcggtttcgc tttatataag
     1981 cagtgcgttt atgcaaatcg tcgtacttct ggtctacttt tctaccgatg cctggcttgc
     2041 aatgctggct atctctaccc tgaccgtttt acctgcgtat ttaatgacca cggcatacct
     2101 gtttaaacta tgtattagcg gcgagtatgc cagctatacc acgaatcaca gccgcagcgc
     2161 cgcgctggtc agcagtatta tcggctttgt attctgcctg tttatgttct acgccagtga
     2221 aatcaaatat ctggcgatgg ttccggtgct gcttacgctg ggcgtgcccc tgtttatctg
     2281 ggcaagaaaa aaagacgatc gcgcagataa aatatttacg ctacgcgaac tggcattttt
     2341 tattttactg ctggtcctcg acatcattgt ttttattcta ctgcattata aaacgataca
     2401 tttttagtcc agattaattc acagcaagtt aatgtgacga taatgtctgt ttcttgggca
     2461 tgacatcctc acagttaaat actatctgaa cagtaacagt ggagacacct aatgaaattt
     2521 aaccacaatc ttttatttat ttcctcacaa tatcttgatg gcgacaaccc ttcgcagcag
     2581 gtactggaag agcttcaaac cgaactcgcg gaacgcggtt ttaaaattca tatcacgcac
     2641 cagatctctg atggcttaaa aatcatcgaa aaaagccccc aatacagcgg gattggtttt
     2701 tactgggagc cagacaatcc gacctttgca gaagagctac agcactttat cagcatattc
     2761 cgcaaaagaa atgccacgac gccgctgata attttctcag aacagaatat taccgatcgt
     2821 atcccactcg acgtcttaaa agaggtcagc gaatatgttt atctgttctc tgaatccgca
     2881 gccttcactg ccaatcgact gtactcctta gtccaccgct atgcggataa gcttcttcct
     2941 ccctacttta aaacccttaa ggactttacc gaggacggtg actattactg ggactgcccg
     3001 gggcatatgg ggggaatggc ctatctgaaa catcctgttg gcattgagtt cattaacttc
     3061 tttggcgaaa acatgatgcg cgctgatatt ggcgtggcta ccgcggagat gggggattat
     3121 ctgatccacg ccggaccgcc taaaaaatcg gaagaaattg cggcccgact gtttggctct
     3181 gattggacct tctacggtgt ttccggctca tcggggtcga accgtattgt ggcccaggct
     3241 gcggttggcg cagatgaaat tgccattatt gaccgaaatt gccacaagtc acttaatcat
     3301 ggcctgaccc tgtctcaggc aaggccggtt tacctgaaac ctacccgcaa cgcgtggggg
     3361 ctgattgggc ctatcccgac cggacgcctg aagaaggcca gtattgatgc gctggtggca
     3421 aacagccgac tggcatctgg tgcggtcagc cagtccccgt cctacgccgt ggtaaccaac
     3481 tgcacctatg atggcttctg ttataacgtg aacgatgtag tcagacacct gggtgaaagc
     3541 gcaccgcgca tccattttga tgaagcatgg tatgcctatg cgcgtttcca tccgctatac
     3601 cagagtcgct atgcaatgga cgcggaggaa acgccaaatc gtccaaccct attcgccgta
     3661 cagtccaccc ataaaatgct gccctcactc tccatggcct caatgattca tgtgaagaaa
     3721 agcgagcgcg cgccgcttaa tttcgatgac tttaacgatg cctttatgat gcacggcacg
     3781 acctcaccct actacccgat cattgcatca attgatgtgg cagtaagcat gatggagggt
     3841 gaatccggtt attcgcttgt gcaggagtca attgaagaag cgattgcctt ccgtaaagcc
     3901 gtggtcagcg tcaagcgcca gctccaggag caggaaggtg gtgacgcctg gttcttcgat
     3961 gtgcttcagc caaccgaagt gcaggacagc gattctgggc agcgatacag ttttgaagag
     4021 gcacccgtat cgctgctgag ccacagcgcc gactgctggt cgctgcgctc cggtgagcgc
     4081 tggcacggtt ttgccgatga tgatctggtc gaaaccaaca gtatgctcga tccagtaaaa
     4141 gtgaccctga cttgtccagg gatcggcccg aagggagaat accagaaaaa cggtattccg
     4201 ggatatttgc tgacccgttt tctcgatgac cgtcgcattg aaattgcccg tactggtgac
     4261 tacaccgtgc tgatcctgtt ctccgtcggc atcaccaaag gcaaatgggg aactctgatt
     4321 gaaagcctgc tggcctttaa aaagcattac gacaatgacg atctggccac agatgctatc
     4381 ccgtcgctga aagcgcattc tccacactac gacacgctaa ccctcaagga gctatgtcag
     4441 acaatgcatg aaaaaatgga tgagctggag ctgatgtcgc atatcaacga cgcggtaaac
     4501 accgatccgg aaccagttat gaccccggca gaagcctatc agaaagtcgt acgctacaaa
     4561 accgagcata tccggctgga tgattttagc ggcagaattg ccgccagcat gctcgtccca
     4621 tatcccccag gcattcctgt actgatgccg ggcgaacgga tgccgcaagg taacaagggc
     4681 attattggct atctgcgcgc cctgcaggaa ttcgataagc aattcccagg ttttgaacat
     4741 gagatccagg gcgttaacgt cgatgaaaac ggggacttct gggtcagagc gattgtggaa
     4801 gaagaacgcg atgggcagtc gctacccggc cacataacct ttaaacgcca ggtctctggt
     4861 attaaaaagg gccgccagta ggcgggggaa agaacaatac cgtcggatcg cctgcaatcc
     4921 gacggcaata ttatagaata gctgagggaa acgttatggc agagcaatct tcagatgtaa
     4981 aaaatagtga caatagcgcc ggaggacata agctggggct tatatccctc atcgctattg
     5041 tcgttagctc catgctggga ggcggcgttt tcagtctgcc gcaaaacacg gcggcctctt
     5101 ctgcactagg gccagtaatc attgcatgga ttattgccgg gatcggtatt tattttatcg
     5161 caaactcctt tcgcgtacta tcagatctgc gcccggacct tcaggctgga gtgtatatgt
     5221 atgcccagga aggttttggt tcctttattg gctttaacgt cgcctggggc tactggctga
     5281 tgaccgcatt tggcaacgtt gcctttgcgg taattttaat ggatgctttt aatcagttta
     5341 tgccgggggt ttttacggat ggtaataatc tgaactccat tatctgcggc tcagtgctga
     5401 tctggggcta taattttctt gttctgtccg ggacgaaagt ggccggattt gttaacacct
     5461 tgggaaccat cgccaagctc gtccctctga tcctattcgt attactgctg ggtgtgctga
     5521 tcgattattc ggacctgttt aaaaactttt ggggagaatc acccgcgatc ctcagtggca
     5581 acggaaatga cgccgcacca gtatcgctgc tgtctcagat tctggcaccg atgaccgtaa
     5641 cgctctgggc ctttattggc gtcgagggag cggttgttct atccggacgt gccaaaaata
     5701 aacaggacgt agggaaagcc acactgatcg gctttctgct ggcgctaatt atttatatgt
     5761 taatgtccat tctgccgttc ggtgtaatgc ctcaggcaga actagcgcag gtcagtaacc
     5821 cctctaccgc aggcgtgctc gcccacgttg tcggtcagtg gggcgactgg ctgatgagcg
     5881 cggggctgat tatttctgtt ctggccggct ggcttgcctg gaccatgcta tgcgctgaaa
     5941 taccgatggt agcaggacag aaaggcgctt tcccgcgcgc gtttgcccga acgaacagta
     6001 aacaggcggc caatgtgtca ctgtgggtta gtagctttgt gatgcaggcg gccatgttac
     6061 ttgtttattt ttcaaataat gcttggacca ccatgtataa tatcagtgcg ctgatggttg
     6121 ttccggccta tattaccacc acgctgtatc tgacccgtat ttgcagaaac ggaaaatatg
     6181 atcagtatgc aaaaaaaggc cgcaggctgg ctttgtccag cggtgtttta ggctcgctat
     6241 tctgtctgtt tattctttac gccagccaga ttgagtatgt tgcattaatt cctatcctgt
     6301 tgacctgtgg tctgccggtc tttatctggt caagaaaaga aaaaaatgat ggtcagccga
     6361 tatttaccaa aaaagagctg atttatctga ttatgctgtt gctgtgcgat attatcgtcg
     6421 ttgccctgtt tattggtgga tatttaaagg tataagtccg agttaaatct ttactgggct
     6481 agtaatgccg ccttttaaac aagaagggcg gcaatcttac tgaaattagt atgctgcaaa
     6541 tcggtaatgc tgccaactta ctgatttagt gtatgatggt gattttaagg tgcttgcgtg
     6601 gcttccattt ccatcagatg tccttcctgc tccgctactg aaggcgtggt gcgtaacggc
     6661 aaaagcactg ccggacatca gcgctatctc tgctctcatt gccgtaaaac atggcaacta
     6721 cagttcactt acaccgcctc tcagcccggt aagcaccaga aaatcattga tatggccatg
     6781 aatggagtcg gatgtcgcgc cagtgcacgc attatgggcg ttggcctcaa cacggtttta
     6841 cgtcacttaa aaaactcagg ccgcagtcgg taacctcgcg catacaaccg ggcagtgatg
     6901 tgattgtctg cgctgaaatg gacgaacagt ggggctacgt cggtgctaaa tcacgtcagc
     6961 gctggctgtt ttacgcgtat gacaggatac ggaggacggt tgtggcgcac
//
LOCUS       DAJVTL010000183         6961 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.185, whole genome shotgun sequence.
ACCESSION   DAJVTL010000183 DAJVTL010000000
VERSION     DAJVTL010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6961
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.185"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..715)
                     /gene="paaX"
                     /locus_tag="OQQ26_003970"
     CDS             complement(<1..715)
                     /gene="paaX"
                     /locus_tag="OQQ26_003970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation operon negative
                     regulatory protein PaaX"
                     /protein_id="HCS1859249.1"
                     /translation="MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHCGGEIWLGSLA
                     ALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAE
                     QPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEA
                     GVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAAE
                     ELTPERAFHIQLLLIHFYRR"
     gene            complement(816..1994)
                     /gene="paaF"
                     /locus_tag="OQQ26_003971"
     CDS             complement(816..1994)
                     /gene="paaF"
                     /locus_tag="OQQ26_003971"
                     /EC_number="6.2.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HCS1859250.1"
                     /translation="MITNTKLDPIGTASVDELQALQTQRLKWTLKHAYENVPMEQVVR
                     IHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGA
                     HYGAERLGATVIPMSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASG
                     CSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWE
                     DHFYPEIVNPHDGTPLADGEHGEQLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRM
                     DRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKE
                     SSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA
                     "
     gene            complement(2021..3213)
                     /gene="paaJ"
                     /locus_tag="OQQ26_003972"
                     /gene_synonym="paaE"
                     /gene_synonym="ydbW"
                     /pseudo
     CDS             complement(2021..3213)
                     /gene="paaJ"
                     /locus_tag="OQQ26_003972"
                     /gene_synonym="paaE"
                     /gene_synonym="ydbW"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase"
     gene            complement(3213..3635)
                     /gene="paaI"
                     /locus_tag="OQQ26_003973"
     CDS             complement(3213..3635)
                     /gene="paaI"
                     /locus_tag="OQQ26_003973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyphenylacetyl-CoA thioesterase PaaI"
                     /protein_id="HCS1859251.1"
                     /translation="MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTVQM
                     LNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRH
                     QGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA"
     gene            complement(3625..5053)
                     /gene="paaC"
                     /locus_tag="OQQ26_003974"
                     /pseudo
     CDS             complement(3625..5053)
                     /gene="paaC"
                     /locus_tag="OQQ26_003974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415913.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase PaaC"
     gene            complement(5055..5843)
                     /gene="paaB"
                     /locus_tag="OQQ26_003975"
     CDS             complement(5055..5843)
                     /gene="paaB"
                     /locus_tag="OQQ26_003975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
                     isomerase"
                     /protein_id="HCS1859252.1"
                     /translation="MMEFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVER
                     DDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPV
                     ICAVNGVAAGAGATLALGCDIVIAARSAKFVMAFSKLGLVPDCGGTWLLPRVAGRARA
                     MGLALLGNQLSAEQAQEWGMIWQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINS
                     AETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFTGK"
     gene            complement(5843..6610)
                     /locus_tag="OQQ26_003976"
     CDS             complement(5843..6610)
                     /locus_tag="OQQ26_003976"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dehydroadipyl-CoA hydratase"
                     /protein_id="HCS1859253.1"
                     /translation="MSELIVSRQQQVLLLTLNRPAARNALNNALLTQLVNELEAAATD
                     SSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGY
                     ALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSG
                     ESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQ
                     AGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFKGR"
     gene            complement(6607..6909)
                     /locus_tag="OQQ26_003977"
     CDS             complement(6607..6909)
                     /locus_tag="OQQ26_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001190272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HCS1859254.1"
                     /translation="MQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACK
                     GGVCATCKCKVLRGKMAMETNYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA"
BASE COUNT         1613 a         2057 c         1666 g         1625 t
ORIGIN      
        1 cacggcgata aaaatggatc agtaaaagct gaatatgaaa tgcacgctcc ggggttaact
       61 cctccgccgc ctcttttaac agcggcacca gcgggcgaaa tgactgaata aaggtttcgt
      121 acatggcatt ttgttcagtt aaatgccagc actcttccac tctggcacgc agtgctgcac
      181 gagaaagcgc cagtggtatt tgcgcttcaa aacaaatcac attatccgcc acccccgctt
      241 catgcaaaag tgtctgtaca tccgccagtt tttgcgacgg cgatgccatc aggctgggtg
      301 ccagtgcgcc aaaaccttgc cagatcaact gctttttgac atcagccagc gttgatttat
      361 ctaaaccttc cgagagcaac aggagccatt taccatccca tgcaggttgc tctgcgcgat
      421 aaattttact ttctgcccgt cgcgtcaggc gcaagccttt atcactgagg ctatagaaac
      481 tgcgtcgccc gatgcgggaa acatccagcc agccttcttt attaagacga aacaaagcgg
      541 tgcgcacgaa acgctcacca aatcccagcc cttccagcaa agcagccaga ctacccagcc
      601 agatttcacc accacaatgg gaaagcgaat caccatacag agaggagatc aaagatgtgc
      661 cactgaccgg aacagcgttt acagcatgtt ggataaaagt atcaagttta ctcattcgct
      721 tcagtctgtt gttattgttg tgatttatga atcatagcac aggtcgtatc gacttctggc
      781 cctggcgctt tacctcacca gggccagacg acacgtcagg caccaacaat attgcgcaga
      841 tcaaacaccc gacacgcctt gccttctgaa cgcgggatac tgccacagtt aacgatcatc
      901 acatcggtag agatccccac catcgactta atccgatggc gcagctggtg gcatacctgg
      961 caacgctgct catgcgtcaa tgtcaggcta ctttctttca actccacttt cacagaaagt
     1021 gaatcaagat gcccccggcg gttcacctcc agttggtaat gcggcgataa atgttcgaat
     1081 ttgacaatct cttcttccag ttgtgacggg aagacattta caccgcgaat gatcaacatg
     1141 tcatcgctgc gtccgctgat gcgatccatg cggcgcatag tccgcgccgt tcctggtaac
     1201 agtcgggtta aatcacgcgt gcggtaacga atgaccggca atgcttcttt ggtcagcgtg
     1261 gtgaataact gttcgccatg ttcaccatcg gcaagcggtg tgccgtcatg aggattaaca
     1321 atttcaggat agaaatgatc ttcccaaatg gttgggccgt cggtagtttc cagacactcc
     1381 atcgccaccc ccggccccat aacttctgac agaccataaa tatccagtgc ggtgatcccc
     1441 aggcgacgct caatctcttt acgcatggcc tgtgtccacg gctcagcacc aaacactcca
     1501 acccgcagcg agcaaccgct ggcatcaccg cccaactgcc gctccagctc ttcaatcagg
     1561 ttaagacaat aagatggcgt aaccatgatc atatctggtt gaaaatcacg gatcagttgc
     1621 gcttgttttt ccgtctgccc gccagacatc gggatcaccg tagcgcccag acgttcggca
     1681 ccatagtgcg cgcccagccc accagtaaac aggccgtaac cataggcaac atgaattttg
     1741 tctttgggcg agccccctgc cgcacgcaaa gaacgcgcta caatattggc ccagttatca
     1801 atatcgtttt gcgtataacc gacaactgtc ggtttacctg tggttcccga agaagcatga
     1861 atgcgcacca cttgttccat cggcacattt tcatacgcgt gtttgagcgt ccatttcaga
     1921 cgctgtgttt gcaacgcctg taactcatca acagacgcgg ttccaatcgg gtcaagcttt
     1981 gtattggtta tcattgtagg gtactcgcag gttgatatgc tcaaacacgc tccagaatca
     2041 tggcgatgcc ctgaccgaca ccgatgcaca tggtgcataa tgcgtaacga ccgttacgcc
     2101 gatgcagctc atggctggca gccagtgcca ggcgggcacc actcattccc aacggatggc
     2161 ctaaggcgat agcgcctccg ttggggttaa catgtggggc atcatcaggc agccccaatt
     2221 cgcgtagtac acccaacgcc tgggccgcga acgcttcgtt cagttcaatc acgtccatat
     2281 cgtgaatact cagccccgcg cgttccagca cccggcgagt tgcaggcacc ggaccaagcc
     2341 ccatcaggcg cggttccccc ccagcggttg ccatggctac gatacgcgct cgcggcgtca
     2401 gtccttgcgc tgctgccatc tgttcactgg caataatcaa cgcagcggct ccgtcattca
     2461 ccccggaggc attgcctgcg gtaatcaccc cattggcacg aaatggtgct tttaacccac
     2521 gtaactgttc cagcgtcgtt tccgggcgca gatgctcatc atgttgtatt tctgttacaa
     2581 catctttctt atttttcaag acgaccggaa caatctcctc agccagaatg cctgaggatt
     2641 gcgcttttgc cgtacgttgc tgactgcgta gcgcaaaact atcttgatct tctcgcgata
     2701 tttttaacag ttcagctaca ttctctgccg tttccggcat gctgtcagtt ccaaattgtt
     2761 gagccatgag cgggttcaca aatcgccagc caatagtggt atcaaacatc tcagcctgac
     2821 gagaaaatgc actggttgcc ttgcccataa caaacggtgc ccgagacatt gactccacgc
     2881 caccagcgat cagcaaatcg ccatcgcccg tgcggcgaac cccagtgcgt ccagcccgga
     2941 accacacaag cggttaatgg ttgtgccgga aacactctgc ggcagccccg ccagtaaagt
     3001 cgccatccgg gctacgttac ggttatcttc tcccgcctga ttagcacagc cgaggatcac
     3061 atcatcgata cattccgcat cgagacgcgg gtttcgcacc agcagctccc gcaaagggat
     3121 agcagccaga tcgtcagccc gaacacctga taatgcccca ccatagcggc caattggcgt
     3181 acgaattccg tcacagataa aggcttcacg catcaggctt ctcctgtaat ggtgccgccg
     3241 atgcggtgag atttaccgcg aaacagcgca accgtttttt gttgttggtt aacaatttcg
     3301 atgtcgtaaa caccggtttg cttgccctga tgacgtacct gcgcagtcgc agttaaggtg
     3361 tctccggcaa agcctggacg taaaaaatca atcgtgcagg cagaagcgac agctgccaac
     3421 ccctggctat tgcaggcgta ggcaaaggca gtatcagcca gtgaaaatag ctgcccgccg
     3481 tggcaacttt gatgaccatt aagcatttgt acagtgacgg tcatggtcac tacagcaaag
     3541 ccttcatcca ttgagataat gtcgatgcca agcgctttgg cgcaggcatc gttctcatac
     3601 attgcatggg cattttgcca agccttatga ctcataaccg ctctccagaa gcgcccgttg
     3661 gcgcagcaat gaacatgggc gatagcgttc ttcgccatag tgatgttgta ggttttccag
     3721 gagtcttaat attcgctgcc agccaagttg cgctccccag gcaagcgggc catatggata
     3781 attcacccca agacgcatgg cggtatcgat atcctgttca gaggccacgc ctttttgcag
     3841 cgcatcaagg gcttcattga tgatcattgc taccgttcgc caaatcagca ttcctgggta
     3901 atctgcaatt tgcagcactg ttttgccctg ctgttgcagg taataaatgg ccttgcgggt
     3961 cgctgagtcc gggttcaccg ctgccgcagc aatggtcacc accttgcccg ccattttgtc
     4021 gaccactacc accgggcgtg ccagtcgtat tgccagcgcc tgtgccatct cgccttgtgt
     4081 ctcaatcaat aaaacatcgt caatttccgt gacaccgtca cttttctttt ctactttcat
     4141 tgggctaaaa ctgtcgctta ccgcttccag gccaacaact gcctcacgtt ccgcgcgcca
     4201 gtcgtacacg cccagcccac ttttcttgcc caaccgtcca ccaatcacca gttcctgttg
     4261 caccagcgaa ggtaaaaaac gacgctcctg ccagaaagcg ttaaacaccg aacaggtgac
     4321 agcaaaattg acgtcctgac caatcagatc ggttaattcc agcggcccca tcggggaaac
     4381 cagcaccatc gcgaagtgca gcgtcaatca cttctggtgc agcaacctgc tcttccagtg
     4441 cccgccaggc ctcggaataa taaggacgcg caacacggtt aacgataaat ccaggagtcg
     4501 aatgacagcg cacaggctgc ttaccccaac tcaacgttag ttcacacaac tgctcaacaa
     4561 cttccgctgc cgttgccagc ccactgacca cctccaccaa cttcatcacc ggtgccgggt
     4621 taaaaaaatg cagccccgca acacgttcag gattttttac ctccgcagca attgcggtta
     4681 tagagattga cgaagtgtta gtggtcaata gcgtttgtgg cgggcaaact tccgccagct
     4741 gtgcaaagag cgcttttttg acgtccagac gctcagacgc cgcttcaata accagattcg
     4801 ctgctgccag cgcgtgaata tcggtcaccg ggaccaggcg tttcaatgtg cgttcacagg
     4861 tttcagcggt cagttttccc cgcgtcacgc gtgaatttag ccgcgcgtgt attccgtcaa
     4921 ttgcgcgggt cagcgcttca gcagaaaggt catacagtaa aacctgatgt ccatgactgg
     4981 cggcaacttc agcaatgcct gcccccatgg tgccgctccc aatcactgcc acagtttgca
     5041 catttatcat catgctattt ccccgtgaac tgcggtgagc gtttagccag gaacgcactg
     5101 acaccttcac gatagtctgc gctccgtccg gcaagtcgct gatagtcgcg ttccagatcc
     5161 agttgcgtat caagcgtatt ggtttcagcg ctatttatcg cttgcttgat aagtccaaga
     5221 ccaaatgtcg gttgtgtcgc cagatgccgt gccagctgtt gcgcggtatc tgccagcgtt
     5281 tcatcatcaa caacctgcca gatcatcccc cattcctgag cctgttcggc actcagttga
     5341 ttccccagca gtgccagccc catggcgcgc gctcgcccag caacgcgtgg cagtaaccag
     5401 gtaccaccgc aatcgggtac taaacctaac ttactaaacg ccatgacgaa ttttgctgaa
     5461 cgggcagcaa taacgatgtc gcaccccagt gccagtgttg cgccagcccc tgccgccacg
     5521 ccattgactg cacagatcac cggttttggc agttttgcca ggcgacgtac cagcgggtta
     5581 tagaaacgct ccactgacat ccctaaatcc ggtgcggggc ctgtgggatc aacattacga
     5641 tcgttaagat cctgaccagc acaaaatccg cgcccggcac ctgtaagtaa caggcaacgg
     5701 atagtgtcgt cgcgctcgac ctgtttaagg cactctgcca gttgtgcgtg catctcatca
     5761 ttaaaactgt tcaggcgttc cgggcggttg agcgttagtg tcatcacgcc cttttctaca
     5821 tgactgagga tgaattccat cattagcgtc ctttaaagtc gggcgtgcgt ttttgtaaga
     5881 aagcggagat gccttcatga cgatcttctg ttgccgccag caaggtgaat aactgtcgct
     5941 cctgggcaag tccggcttgc aaagccactt cctgcgactg gcgcagcgct tgctttgccg
     6001 cttgtaaggc cagcggcgag tgacgtgcca ttttcgatgc cagctgtaag gcgtattcga
     6061 gggttaaatc gctggggaat acgtcgctaa ccagcccggc ctgctgtgct tgctgggcgg
     6121 tgatactttc tccgctcagc accattttgc tggctaacga tttaccgaca ctacggatta
     6181 aacgttgcgt tccgcctgcg ccaggcatga tgccgagagt gatttccggc aacccaaaac
     6241 gcgcgttctc tccggcaacc accacatcgc acaacaatgc cagttcgcaa cccgcaccaa
     6301 gagcgtaacc gttgacggct gcgatgagag gtttgttgaa ggcctgcaat cgcgcccata
     6361 gctgcgggcg tgtatcgttt aaggtggccg cgagatcttt ttctgccatt tcgttgagat
     6421 cggccccagc ggcaaaaaag cgtgcattac cggtaatcac acagaccgaa atgctgctat
     6481 cggtagccgc agcttccagt tcatttacca gttgcgtcag aagggcatta tttagcgcat
     6541 tacgtgcggc gggacggtta agggtcagca acaatacttg ttgctgacgg ctgacgatca
     6601 gttcgctcat gccatcccct tcgcgtcaaa gtcaaccacc acatcgctgg tcagcggcag
     6661 tgcctggcaa ctcaacacat agcctgcggc cagttcatcc ggttccagac tgtaattggt
     6721 ttccatcgcc attttgccac gcagcacttt gcatttgcag gtcgcacaga cgccgccttt
     6781 gcaggcatag ggcagatcag ccccctggcg caatgccgca tcgagaatgc tttcatcgtc
     6841 ggcattaagc acgatttccc gatcccgccc atcctgacgt acagtcactt tttgtccgtc
     6901 actttgcacg ttaacgctac gtttgacgcg cgtgccaggc gtattaaacc gctccagatg
     6961 a
//
LOCUS       DAJVTL010000184         6927 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.186, whole genome shotgun sequence.
ACCESSION   DAJVTL010000184 DAJVTL010000000
VERSION     DAJVTL010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6927
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.186"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..173
                     /locus_tag="OQQ26_003978"
     CDS             <1..173
                     /locus_tag="OQQ26_003978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859255.1"
                     /translation="EHPSLKAFLERHGGVRAFQWTPPYDWKLIRVVCRKWSASVGALW
                     VTVTADFEQVVN"
     gene            173..871
                     /locus_tag="OQQ26_003979"
     CDS             173..871
                     /locus_tag="OQQ26_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HCS1859256.1"
                     /translation="MQDIRQETLNECTRAEQSARVELWEIDLTEVGGERYFFCNEQNE
                     KGEPVTWQGRQYQAYPIQGAGFELNGRGCAARPTLTVSNLHGMVTGMAEDLQSLVGGT
                     VVRRKVYARFLDAVNFVNGNSDADPEQEVISRWRIEQCSELSAVSASFVLATPTETDG
                     AVFPGRIMLANTCMWTYRSDECGYTGRAVADEFDKPTTDIRKDKCSKCMRGCELRNNT
                     GNFGGFLSINKLSQ"
     gene            876..1619
                     /locus_tag="OQQ26_003980"
     CDS             876..1619
                     /locus_tag="OQQ26_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859257.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVRTPEGDRYLPSENISGEPE
                     ERFRMAPEDWLRAQMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEAT
                     GLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHREWHASAFTGICNDLAAASTFV"
     gene            1556..2158
                     /locus_tag="OQQ26_003981"
     CDS             1556..2158
                     /locus_tag="OQQ26_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HCS1859258.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVA
                     IWMPGVGIMASNLLFSLGASMTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMV
                     AQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            2219..5698
                     /locus_tag="OQQ26_003982"
     CDS             2219..5698
                     /locus_tag="OQQ26_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HCS1859259.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVEGPVDGLKS
                     VLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRLTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMAWCL
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQNCDQSVPDGFGGTEPRIACNAYLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNAVEVNWIDPDNGWETATELVEDTQAIARYGRNVTKMDAFGCTSRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLD
                     REITLPSSGTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFRQ
                     LALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITVVPKLAVYDP
                     TVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVRSVNTVGKS
                     AFVEAVGRASDDAEGYLSFYKGLINKTHLGKELWTQIDNGQLAPDLTEIRTSITNVSN
                     EITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIEN
                     TPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNP
                     PAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIEGDLVKTVG
                     KPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNNIYSSCRLI
                     VKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPTASISDLLV
                     VVMKKATAGITIS"
     gene            5766..6323
                     /locus_tag="OQQ26_003983"
     CDS             5766..6323
                     /locus_tag="OQQ26_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HCS1859260.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLQPHTDMPG
                     SDDLKGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSAYAM
                     AGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAWGAGVQFNPTESVAI
                     DLAYEGSGSGDWRTDGFIVGVGYKF"
     gene            6345..>6927
                     /locus_tag="OQQ26_003984"
     CDS             6345..>6927
                     /locus_tag="OQQ26_003984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000127037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1859261.1"
                     /translation="MTARWFRRAFCGVNMAVKISGVLKDGAGKPVVNCAIELRARRTS
                     PTVVAHVVATCVTDNNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTDASGTLNA
                     FLNAPKDGDLRPEVMKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAE
                     NARQDAVATAEDRKATAEDVKSTGKNAVLSGQRA"
BASE COUNT         1564 a         1678 c         2224 g         1461 t
ORIGIN      
        1 gtgaacaccc atctttaaaa gcctttctgg aacggcacgg tggcgtccgc gcatttcagt
       61 ggacgccacc ttatgactgg aaactgatca gggtggtttg tcgtaaatgg tcggcaagcg
      121 tgggggcgtt atgggtgact gtaacggccg attttgaaca ggtggtgaac tgatgcagga
      181 tatccggcag gaaacactga atgaatgcac ccgtgcggag cagtcagccc gggtggagct
      241 ctgggaaatc gatctgacag aggtcggtgg tgagcgttat tttttctgta atgagcagaa
      301 cgaaaaaggt gagccggtca cctggcaggg gcggcagtat caggcatacc ccattcaggg
      361 ggcggggttt gaactgaacg gcaggggctg tgctgcccgt ccgacactga cggtctctaa
      421 cctgcacggc atggtcaccg ggatggcgga agatctgcag agtctggtcg gcggaacggt
      481 ggtccggcgt aaggtttacg cccgttttct ggatgcggtg aacttcgtca acggaaacag
      541 cgacgccgat ccggaacagg aggtgatcag ccgctggcgc atcgagcagt gcagcgaact
      601 gagcgcggtc agtgcctctt ttgtgctggc cacaccaacg gagacggatg gcgcggtttt
      661 cccggggcgt atcatgctgg cgaatacctg tatgtggact taccgttctg atgagtgtgg
      721 ttacacgggc agggcagtgg ctgacgagtt cgacaaacca acgacggata tccggaagga
      781 caaatgcagc aagtgtatgc gcgggtgtga gttgcgcaac aataccggta atttcggcgg
      841 tttcctttcc atcaataaac tttctcagta aatccatgac acagacagaa tcagcgattc
      901 tggcgcacgc ccggcgatgt gcgccagcgg agtcgtgtgg cttcgtggtg agaacgccgg
      961 agggagacag gtatcttccc agcgagaata tctccggtga gccggaggaa cggttccgga
     1021 tggctccgga ggactggctg cgggcacaaa tgcagggtga gattgtagca ctggtccaca
     1081 gtcatcccgg tggtctgccc tggctgagtg aggctgaccg gcggctgcag gtgcagagtg
     1141 atttgccgtg gtggctggtc tgccgggggg cgattcacaa gttccgctgt gtgccgcatc
     1201 tcaccgggcg gcgctttgag cacggggtga cggactgtta cacgctgttc cgggatgctt
     1261 atcatctggc ggggattgag atgccggatt ttcatcgcgg ggatgactgg tggcgtcacg
     1321 gtcagaatct ctatctggat aatctggagg ccacagggct gtatcaggtg ccgttgtcat
     1381 cagcacaacc gggcgatgtg ctgctgtgct gttttggttc atcggtgccg aatcatgccg
     1441 ccatttactg cggcgatggt gagctgctgc accatattcc tgaacaactg agtaaacgag
     1501 agaggtatac cgacaaatgg cagcgacgca cacactccct ctggcgtcac cgggaatggc
     1561 acgcatctgc ctttacgggg atttgcaacg atttggccgc cgcatcgacc ttcgtgtgaa
     1621 aacgggggct gaagccatcc gcgcactggc cacacagctc ccggcgtttc gtcagaaact
     1681 gagtgacggc tggtatcagg tgcgcattgc cgggcgtgat gcaggtgaaa ccgaattgtc
     1741 tgcccgtctt aatgagccgc tggcaaatgg tgcagtgatc cacatagtac cgcgtctggt
     1801 gggagctaaa agtggcggtg tgtttcaggc ggtgctgggg gcagctgtta tggcggttgc
     1861 tatatggatg ccgggggtag gaattatggc gagtaatctg ctgttttctc tcggtgccag
     1921 tatgacgctt ggcggtgttg cacagatgct ggcaccgaaa gccagaactc cccgtacaca
     1981 gacaacggat aacggcaaac agaacacctg tttctcctca ctggataaca tggttgccca
     2041 gggcaatgtt ctgcctgttc tgtacggtga aatgcgcgtg gggtcgcggg tggtatctca
     2101 ggagatcagc acggcagacg aaggggatgg tggtcaggtt gtggtgattg gtcgctgatg
     2161 caaaatgttt tatgtgaaac cgcctgcggg cggttttgtc gtttatggag cgtgaggaat
     2221 gggtaaaggc agcagtaagg ggcatacccc gcgcgaagcg aaggacaacc tgaaatccac
     2281 gcagttgctg agtgtgattg atgccatcag cgaagggccg gttgaaggtc cggtggatgg
     2341 attaaaaagc gtgctgctga acggtacgcc ggtgctggac agcgagggga agacaaactt
     2401 ttccggtgtt acggtggtgt tccgtgcagg tgagcaggag cagacaccgc cggagggttt
     2461 tgaatcctcc ggctccgaga cggtgctggg tacggaagtg aaatatgaca cgccgatcac
     2521 ccggaccatc acgtcggcaa acatcgaccg tctgcgcctg accttcggtg tgcaggcact
     2581 ggtggaaacc acctcaaagg gtgaccggaa tccgtcggaa gtccgcctgc tggttcagat
     2641 acagcgtaac ggtggctggg tgacggaaaa agacatcacc attaagggca aaaccacttc
     2701 gcagtatctg gcctcggtgg tggtgggtaa cctgccgccg cgcccgttta atatccggat
     2761 gcgcaggatg acaccggaca gcaccacaga ccagttgcag aacaaaacgc tctggtcgtc
     2821 gtacaccgaa atcatcgatg tgaaacagtg ctacccgaac acggcgctgg tcggcgtgca
     2881 ggtggattca gagcagttcg gtaaccagca ggtgagtcgc aattatcatc ttcgcgggcg
     2941 cattctgcag gtgccgtcga actataaccc gcagacgcgg caatacagcg gtatctggga
     3001 cggaacgctt aagccagcat acagcaacaa catggcctgg tgtctgtggg acatgctcac
     3061 tcatccgcgc tacggcatgg ggaaacgtct tggtgcggcg gatgtggata aatgggcgct
     3121 gtatgtcatc ggccagaatt gcgaccagtc ggtgccggac ggctttggcg gcacggagcc
     3181 gcgcatcgcc tgtaatgcgt acctgaccac acagcgcaag gcttgggatg tgctcagtga
     3241 tttctgctcg gcgatgcgct gtatgccggt atggaacggg cagacgctga cgttcgtgca
     3301 ggaccgacca tcggataagg tgtggaccta taaccgcagt aatgtggtga tgccggatga
     3361 tggcgcgccg ttccgctaca gcttcagcgc cctgaaggac cgccataatg ccgttgaggt
     3421 gaactggatt gacccggata acggctggga gacggcgaca gagcttgtgg aggacacgca
     3481 ggccattgcc cgttacggtc gtaacgtcac gaagatggat gcctttggct gtaccagtcg
     3541 ggggcaggca caccgcgccg ggctgtggct gattaaaaca gaactgctgg aaacgcagac
     3601 cgtggacttc agcgtgggtg ccgaagggct tcgccatgta ccgggcgatg tcattgaaat
     3661 ctgtgatgat gactatgcgg ggatcagcac cggtgggcgt gtgctggcgg tgaacagcca
     3721 gacccggacg ctgacgctcg accgtgaaat cacgctgccg tcctccggta ccacgctgat
     3781 aagcctggtt gacggaaatg gcaatccggt cagcgtggag gttcagtccg tcaccgacgg
     3841 cgtgaaggtg aaagtgagcc gggttcctga cggcgttgca gaatacagcg tgtgggggct
     3901 gaagctgccg acgctgcgcc agcgcctgtt ccgctgcgtg agtatccgtg agaacgacga
     3961 cggcacgtat gccatcaccg ccgtgcagca tgtgccggaa aaagaggcca tcgtggataa
     4021 cggggcacac tttgacggtg accggcgcgg cacggtgaat ggtgtcacgc cgccagcggt
     4081 gcagcatctg accgccgaag tcaccgcaga cagcggggaa tatcaggtgc tggcgcgatg
     4141 ggacacgccg aaggtggtga agggtgtgag cttcctgctt cgcctgaccg tggcagcgga
     4201 cgacggcagt gagcggctgg tcagcacagc caggacgacg gaaaccacat accgcttcag
     4261 gcagctggcg ctggggaatt acagtctgac agtccgggcg gtaaatgccc gggggcagca
     4321 gggcgatccg gcgtcggtat cgttccggat tgcggcaccg gcagcgcctg tcactattga
     4381 actgataccg gggtattttc agataacggt ggtcccgaaa ctggctgtat atgacccgac
     4441 ggtgcagttt gagttctggt tttcggaaaa gcggattgcg gatatcaggc aggttgaaac
     4501 cagcgcccgc tatcttggca cggcgctgta ctggatagcc gccagtatca atatcaggcc
     4561 gggccatgat tattattttt acgttcgcag tgtgaacacc gttggcaaat cggcatttgt
     4621 ggaggccgtc ggtcgggcga gcgatgatgc ggaaggttat ctgagttttt ataaagggtt
     4681 gatcaataaa acgcatctcg gcaaggagtt gtggacgcag attgataacg gtcagcttgc
     4741 gccggacctg actgaaatca ggacgtccat tacgaatgtc agcaatgaaa tcacgcaaac
     4801 cgtcaataaa aaactggaaa atcagagtgc tgcaatccag cagatacaga aagttcaggt
     4861 tgatacaaat aataacctga acagcatgtg ggctgtgaag ctgcaacaga tgaaggacgg
     4921 acgcctttat attgcgggta tcggtgccgg tattgagaat acgccagcag gaatgcagag
     4981 tcaggtgctg ctggcggcag acaggattgc gatgattaat cctgcgaatg gcaacacaaa
     5041 gccgatgttt gttggtcagg gcgatcagat attcatgaac gacgtgttcc tgaaacgcct
     5101 gacggctccg accattacca gcggcggtaa tcctccggca ttttccctga cacctggcgg
     5161 acggctgacg gcgaaaaatg ccgatatcag cggtaacgtg aacgcgaact ccgggacgct
     5221 caacaacgtc acgattaata agaactgtcg ggttctggga aaattgtccg cgaaccagat
     5281 tgaaggcgat ctcgttaaaa cagtgggcaa acctttccca cgggactccc gggcaccgga
     5341 gaggtggcca tcagggacca ttaccgtcag ggtttatgac gatcagccgt ttgatcggca
     5401 aattgttatt cctgcggtgg cgtttcgcgg tgctaaacat gagcggaaga ataacaatat
     5461 ttattcgtca tgccgcctga tagtgaagaa aaacggtgct gaaatttata accgaacgac
     5521 cctggataat acgctgatat atacgggtgt tattgatatg cctgccggtc acggtcacat
     5581 gacgctggag ttttctgtat cggcatggct ggtaaatggc tggtatccca cagcaagtat
     5641 cagcgatttg ctggttgttg tgatgaagaa agccactgca ggcatcacga ttagctgaat
     5701 tttataaccc ggatacgggc accagaaatg gtgccttttt tattgcagaa aagcgagagg
     5761 taattatgcg taaagtttgt gcagccattt tgtccgcagc catctgtctg gctgtatccg
     5821 gtgcgcctgc atgggcgtct gaacatcagt ccacgctgag cgccgggtat cttcagcccc
     5881 atactgatat gccaggcagc gatgacctga agggcattaa cgtgaaatac cgttatgagt
     5941 ttacggacac gctggggctg gtgacgtcat tcagctatgc caacgctgaa gatgagcaaa
     6001 aaacgcatta cagcgatacc cgctggcatg aggattccgt gcgtaaccgc tggttcagcg
     6061 cgtatgcgat ggcgggcgtg gcttacagcc gtgtgtcgac cttctccggg gattatctcc
     6121 gcgtaactga caacaagggg aaaacgcacg atgtgctgac cgggagtgat gacaaccgcc
     6181 acagcaacac gtctctggcg tggggggctg gcgtgcagtt taacccgacc gaatccgtgg
     6241 ccattgacct tgcttatgaa ggttccggca gtggcgactg gcgcactgac ggtttcatcg
     6301 tgggtgtcgg ttataagttc tgattagcca ggtaacacag tgttatgaca gcccgctggt
     6361 tcaggcgggc tttttgtggg gtgaatatgg cagtaaagat ttcaggtgta ctgaaagatg
     6421 gggcgggtaa acctgtcgta aattgtgcga ttgaactgcg ggccagaaga accagtccga
     6481 ccgttgtggc acacgttgtt gccacttgcg tgacggacaa taacggtgct tatgtgattg
     6541 aggctgagcc ggggtattac gaggttgcgc ttcactgtaa cggctggcag ccaacccgtg
     6601 tcggggatat tgatgtggca ccgactgatg catcggggac actgaacgcg tttctgaatg
     6661 caccaaagga tggtgattta cgtccggagg tgatgaagcg ctttgaggaa atggtggcgc
     6721 aggcgcagca gagtgccggg gctgcagccg gaaacgcaca gcagacggcg caggatgtgg
     6781 cggcagccgc aacggcccgt gatgatgcac aacgttttgc ggagaatgcc agacaggatg
     6841 cagttgccac tgcagaggac agaaaggcca ctgcggaaga cgtgaaaagc acggggaaaa
     6901 acgccgtctt atccggtcag cgtgcac
//
LOCUS       DAJVTL010000185         6896 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.187, whole genome shotgun sequence.
ACCESSION   DAJVTL010000185 DAJVTL010000000
VERSION     DAJVTL010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6896
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.187"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            4..720
                     /gene="bcsQ"
                     /locus_tag="OQQ26_003985"
     CDS             4..720
                     /gene="bcsQ"
                     /locus_tag="OQQ26_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000537468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HCS1859262.1"
                     /translation="MGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQ
                     GWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKA
                     SGRYQWILIDLPRDASQIPHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILIND
                     FRIGSQVQDDIYQLWLQSQRRLLPMLIHRNEAMAECLAAKQPVGEYRSDALAAEEILT
                     LANWCLLNYSGLKTPVGSAS"
     gene            717..3335
                     /gene="bcsA"
                     /locus_tag="OQQ26_003986"
     CDS             717..3335
                     /gene="bcsA"
                     /locus_tag="OQQ26_003986"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417990.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HCS1859263.1"
                     /translation="MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILA
                     WIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGASRKETPKPR
                     RRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSL
                     ILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRY
                     TSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVD
                     IFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIART
                     THEHAKAGNINNALKYVKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHF
                     FSPDPFERNLGRFRKTLNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIA
                     VETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLD
                     NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYALALMIALFV
                     LPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGG
                     LVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVL
                     GGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQIL
                     EGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWAL
                     WQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFIPRRP
                     ERSETAQPSDQALAQQ"
     gene            3346..5685
                     /gene="bcsB"
                     /locus_tag="OQQ26_003987"
     CDS             3346..5685
                     /gene="bcsB"
                     /locus_tag="OQQ26_003987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HCS1859264.1"
                     /translation="MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTE
                     QNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGM
                     RSDEVVTKAMLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPIN
                     LLFITDFNRVRLEFVGHYQDVCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPV
                     PFFDPRDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRN
                     AIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQ
                     GNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAI
                     NVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEAN
                     RLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQN
                     HVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMET
                     LLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQAT
                     ESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLA
                     DSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERLWYAL
                     ANHPILLAVLAAISVILLAWVLWRLLRIISSRRLTPDNE"
     gene            5692..6798
                     /gene="bcsZ"
                     /locus_tag="OQQ26_003988"
     CDS             5692..6798
                     /gene="bcsZ"
                     /locus_tag="OQQ26_003988"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HCS1859265.1"
                     /translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
                     PSDARKITTSEGQSYGMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
                     NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
                     SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
                     PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
                     KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
                     VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
     gene            6780..>6896
                     /locus_tag="OQQ26_003989"
     CDS             6780..>6896
                     /locus_tag="OQQ26_003989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001225067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase"
                     /protein_id="HCS1859266.1"
                     /translation="MRKFTLNIFTLSLGLAVMPMVEAAPTAQQQLLEQVRLGE"
BASE COUNT         1505 a         1803 c         1976 g         1612 t
ORIGIN      
        1 ggcgtgggga caacaaccat caccgccgca ttagcctggt cattacaaat gttgggagaa
       61 aatgtcctgg tggtcgatgc ctgcccggac aacttgttgc gcctgtcatt taatgttgat
      121 tttacccacc gtcagggctg ggccagagcg atgctggatg gccaggactg gcgtgacgct
      181 gggttgcgct acacctcgca gctcgatttg ctgccttttg gtcagttatc cattgaggaa
      241 caagaaaatc cacagcactg gcaaacccgg ctgagcgata tttgctccgg cttacagcaa
      301 ctaaaagcca gcgggcgtta ccagtggatt ttaatcgact taccgcgtga tgcctcgcag
      361 ataccccacc agctgctgag tttgtgcgat cactcgctgg caatcgtcaa tgtggatgcc
      421 aactgccata tccgactgca tcagcaagcg ctgccggatg gcgcacatat tttgattaat
      481 gacttccgta ttggcagtca ggttcaggac gatatttacc agctttggtt gcaaagccag
      541 cgccgattac tgccgatgct cattcatcgt aatgaagcga tggctgaatg cctggcggct
      601 aagcaaccag taggtgaata tcgcagtgat gcgctggcgg ctgaagagat actgacgctg
      661 gcgaactggt gcctgttgaa ctactccggg ctgaaaacgc cagtcgggag tgcatcatga
      721 gtatcctgac ccggtggttg cttatcccgc cggtcaacgc gcggcttatc gggcgttatc
      781 gcgattatcg tcgtcacggt gcgtcggctt tcagcgcgac gctcggctgt ttctggatga
      841 tcttggcctg gatttttatt ccgctggagc acccgcgctg gcagcgtatt cgcgcagaac
      901 ataaaaacct gtatccgcat atcaacgcct cgcgtccgcg tccgctggac ccggtccgtt
      961 atctcattca aacatgctgg ttattgatcg gtgcatcgcg caaagaaacg ccgaaaccgc
     1021 gcaggcgggc attttcaggt ctgcaaaata ttcgtggacg ttaccatcaa tggatgaacg
     1081 agctgcctga gcgcgttagc cataaaacac agcatctgga tgagaaaaaa gagctcggtc
     1141 atttgagtgc cggggcgcgg cggttgatcc tcggtatcat cgtcaccttc tcgctgattc
     1201 tggcgttaat ctgcgttact cagccgttta acccgctggc gcagtttatc ttcctgatgc
     1261 tgctgtgggg ggtagcgctg atcgtacggc ggatgccggg gcgcttctcg gcgctaatgt
     1321 tgattgtgct gtcgctgacc gtttcttgcc gttatatctg gtggcgttac acctctacgc
     1381 tgaactggga cgatccggtc agcttggtgt gcgggcttat tctgctcttc gctgaaacgt
     1441 acgcgtggat tgtgctggtg ctcggctact tccaggtagt atggccgctg aatcgtcagc
     1501 cggtgccatt gccgaaggat atgtcgctgt ggccgtcggt ggatatcttt gtcccgactt
     1561 acaacgaaga tctcaatgtg gtgaaaaata ccatttacgc ctcgctgggt atcgactggc
     1621 cgaaagacaa actgaacatc tggatcctcg atgacggcgg cagggaagag tttcgccagt
     1681 ttgcgcaaaa cgtgggggtg aaatatatcg cccgcaccac tcatgaacat gcgaaagcgg
     1741 gcaacatcaa caatgcgctg aaatatgtca aaggcgagtt cgtgtcgatt ttcgactgcg
     1801 accacgtacc aacgcgatcg ttcctgcaaa tgaccatggg ctggttcctg aaagagaaac
     1861 agctggcgat gatgcagact ccacaccact tcttctcgcc ggacccgttt gaacgcaacc
     1921 tgggacgttt tcgtaaaacg ctgaacgaag gcacgctgtt ctatggtctg gtgcaggatg
     1981 gcaacgatat gtgggacgcc actttcttct gcggttcctg tgcggtgatt cgtcgtaagc
     2041 cgctggatga aattggcggc attgctgtcg aaaccgtgac tgaagatgcg catacttctc
     2101 tgcgtttgca ccgtcgtggc tatacctccg cgtatatgcg tattccgcag gcggcggggc
     2161 tggcgaccga aagtctgtcg gcgcatatcg gtcagcgtat tcgctgggcg cgcgggatgg
     2221 tacaaatctt ccgtctcgat aatccgctca ccggtaaagg actgaagttt gctcagcggc
     2281 tgtgctacgt caacgccatg ttccacttct tgtcgggcat tccacggctg atcttcctga
     2341 ctgcgccgct ggcgttcctg ctgcttcatg cctacatcat ctatgcgcta gcgttgatga
     2401 tcgccctgtt cgtgctgccg catatgatcc atgccagcct gaccaactcc aagatccagg
     2461 gcaaatatcg ccactctttc tggagtgaaa tctacgaaac ggtgctggcg tggtatatcg
     2521 caccaccgac gctggtggcg ctgattaacc cgcacaaagg caaatttaac gtcaccgcca
     2581 aaggtggact ggtggaagaa gagtacgtcg actgggtgat ctcgcggccc tacatcttcc
     2641 ttgttctact caacctggtg ggcgttgcgg taggcatctg gcgctacttc tatggcccgc
     2701 caaccgagat gctcaccgtg gtcgtcagta tggtgtgggt gttctacaac ctgattgttc
     2761 ttggcggcgc agttgcggta tcggtagaaa gcaaacaggt acgccgatcg caccgcgtgg
     2821 agatgacgat gcccgcggca attgcccgcg aagatggtca cctcttctcg tgtaccgttc
     2881 aggatttctc cgacggtggt ttggggatca agatcaacgg tcaggcgcag attctggaag
     2941 ggcagaaagt gaatctgttg cttaaacgcg gtcagcagga atacgtcttc ccgacccagg
     3001 tggcgcgcgt gatgggtaat gaagttgggc tgaaattaat gccgctcacc acccagcaac
     3061 atatcgattt tgtgcagtgt acgtttgccc gtgcggatac atgggcgctc tggcaggaca
     3121 gctacccgga agataagccg ctggaaagtc tgctggatat tctgaagctc ggcttccgtg
     3181 gctaccgcca tctggcggag tttgcgcctt cttcggtgaa gggcatattc cgtgtgctga
     3241 cttctctggt ttcctgggtt gtatcgttta ttccgcgccg cccggagcgg agcgaaacgg
     3301 cacaaccatc ggatcaggct ttggctcaac aatgatgata acgcgatgaa aagaaaacta
     3361 ttctggattt gtgcagtggc tatggggatg agtgcgttcc cctctttcat gacgcaggcg
     3421 acgccagcaa cgcaaccact gatcaatgct gagccagctg tagccgccca gacggaacaa
     3481 aatccgcagg tggggcaagt gatgccgggc gtgcagggtg ctgatgcgcc agtcgtggcg
     3541 cagaacggtc cttcgcgtga tgtgaagctg acctttgcgc aaattgcacc gccgccgggc
     3601 agcatggtgc tacgtggcat taacccgaac ggcagcattg agtttggtat gcgcagcgat
     3661 gaagtggtga cgaaggcgat gctcaacctc gaatacaccc catcgccatc gttactgcct
     3721 gtccagtcgc agttaaaggt ttatctcaat gatgaactga tgggcgtgct gccagtgacc
     3781 aaagaacagt tgggtaaaaa aacgctggcg caaatgccca ttaacctact gtttattacc
     3841 gacttcaacc gtgtacggct ggagtttgtc ggccattatc aggacgtgtg cgaaaacccg
     3901 gccagcacca cgctttggct ggatgttggg cggagcagtg gactggatct gacctatcag
     3961 accctgaatg tgaagaatga cctgtcacac ttcccggtgc cattctttga cccgcgcgat
     4021 aaccgtacta acaccttgcc gatggtcttt gcgggtgcgc cggatgttgg gctgcaacaa
     4081 gcctctgcca ttgtcgcctc gtggtttggt tcgcgttctg gctggcgtgg gcagaacttc
     4141 ccggtgctct ataaccaact gccggatcgt aatgccattg tctttgcaac caacgacaaa
     4201 cggccggact tcctgcgcga tcatccggcg gtaaaagccc cggtgattga gatgatcaac
     4261 catccgcaga atccttacgt caaactgctg gtggtgtttg gtcgtgacga caaagacctg
     4321 ttgcaggcag cgaaaggtat cgctcagggt aacattctgt tccgtggtga aagcgtggta
     4381 gtgaatgaag tgaaaccgct gctaccgcgt aagccgtacg atgcgccgaa ctgggtgcgt
     4441 accgatcgtc cggtcacctt tggtgaactg aaaacctatg aagaacagtt acaatccagc
     4501 ggtcttgagc cagcagcgat taatgtttcg ctaaacctgc cgccggatct ctacctgatg
     4561 cgcagtaccg gcattgatat ggatattaat taccgctaca ccatgccgcc ggtgaaagac
     4621 agttcgcgga tggatatcag cctgaataac cagttcctgc aatccttcaa cctgagcagc
     4681 aaacaggagg cgaaccgcct gctgctgcgg attccggtat tacaaggttt gctggatggc
     4741 aaaacagatg tctctattcc ggcgctgaaa ctgggcgcga ccaaccagct gcgcttcgac
     4801 tttgagtata tgaacccgat gccgggcggt tcggtggata actgtattac cttccagccg
     4861 gtgcagaatc atgtggtgat tggtgacgac tccaccatcg acttctcgaa gtattaccac
     4921 ttcatcccga tgccggatct acgcgccttt gctaacgcgg gcttcccatt cagccggatg
     4981 gcggatctgt cgcaaaccat caccgtgatg ccgaaagcgc ctaacgaagc acagatggaa
     5041 acgttgctga atactgttgg ttttatcggc gcacagacgg gcttcccggc gattaatctg
     5101 acggtgaccg atgatggcag caccattcag ggcaaagatg ccgacatcat gatcatcggt
     5161 ggtatcccgg acaaattaaa agacgataag cagatcgacc tgttggtgca ggcgaccgaa
     5221 agctgggtga aaacaccgat gcgccagacc ccgttccccg gcattgtgcc ggacgagagc
     5281 gatcgcgcgg cagaaacccg gtcaacgctg acctcttccg gtgcgatggc ggcggtgatt
     5341 ggcttccagt cgccgtataa cgaccagcgc agcgtgattg cgctgctggc agatagccca
     5401 cgcggttatg aaatgcttaa cgatgcggtg aacgatagcg gcaaacgcgc caccatgttc
     5461 ggttcggtcg cggtgatccg cgagtccggt atcaacagcc tacgtgttgg cgacgtttat
     5521 tacgtaggtc atctgccgtg gttcgagcgc ttgtggtatg cgctggcaaa ccatccgatt
     5581 ctgctggcgg tgctggcggc tatcagtgtg atattgctgg catgggtact gtggcgtctg
     5641 ctgcgaatta ttagtagtcg tcgtcttacc ccggataacg agtaattgaa gatgaatgtg
     5701 ttgcgtagtg gaatcgtgac gatgctgctg ctggctgcct ttagtgttca ggcagcctgt
     5761 acctggcctg cctgggagca gtttaaaaag gattacatca gtcaggaagg gcgcgtcatc
     5821 gaccccagcg acgcgcgcaa aatcaccacc tccgaagggc aaagttacgg catgttcttt
     5881 gccctggcgg ctaacgaccg tgcagctttc gataatattc tcgactggac gcagaacaat
     5941 ctcgctcagg gttctttaaa agaacgtttg cccgcctggc tgtggggcaa gaaagagaac
     6001 agtaagtggg aagtgctgga cagcaattcg gcctccgatg gtgatgtctg gatggcctgg
     6061 tcgttgctgg aggcggggcg tttgtggaaa gagcagcgtt ataccgacat cggcagcgcg
     6121 ttgttaaaac gtattgcgcg ggaggaagtg gtgacggtgc ctgggctggg ttccatgttg
     6181 ttaccgggca aagtgggttt tgctgaggat aacagctggc gttttaaccc cagctacctg
     6241 ccgccgacgc tggcgcagta tttcacccgc tttggcgcgc cgtggaccac gctgcgcgaa
     6301 accaatcaac gtttattgct ggaaaccgcc ccgaaaggtt tttcgccaga ctgggtgcgc
     6361 tatgagaaag acaaaggctg gcagctaaaa gccgaaaaaa cattgatcag cagctacgac
     6421 gctatccgcg tttacatgtg ggtaggcatg atgcctgaca gcgatccgca gaaagcgcgg
     6481 atgctcaacc ggtttaaacc gatggcgaca ttcactgaga aaaacggtta tccgccggaa
     6541 aaagtggatg tggctacggg gaaagcgcag ggtaaaggac cagtcggttt ttctgccgcc
     6601 atgctgccct ttttacaaaa ccgcgatgcg caggccgttc agcgccagcg cgtggccgat
     6661 aactttcccg gcagcgatgc ctattacaac tatgtgctga ccctgtttgg acaaggctgg
     6721 gatcaacacc gtttccgctt ctcgacaaaa ggtgagttat tacctgactg gggccaggaa
     6781 tgcgcaaatt cacactaaac atattcacgc tttccctcgg tctggccgtc atgccgatgg
     6841 tcgaggcagc accaaccgct cagcaacagt tgctggagca agttcggtta ggcgaa
//
LOCUS       DAJVTL010000186         6829 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.188, whole genome shotgun sequence.
ACCESSION   DAJVTL010000186 DAJVTL010000000
VERSION     DAJVTL010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6829
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.188"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..915
                     /locus_tag="OQQ26_003990"
     CDS             <1..915
                     /locus_tag="OQQ26_003990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311606.1"
                     /note="catalyzes the oxidation of formate to carbon
                     dioxide and molecular hydrogen; formate hydrogenlyase
                     comprises of a formate dehydrogenase, unidentified
                     electron carriers and a hydrogenase (subunit 3); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HCS1859267.1"
                     /translation="AGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWF
                     RTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGA
                     FVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVA
                     LAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLIACPLLPFIIMAICK
                     GDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPVSLVPGWQ
                     CEGSALLFRWMALVELAVLVVIIVSRGA"
     gene            918..1841
                     /gene="hycD"
                     /locus_tag="OQQ26_003991"
     CDS             918..1841
                     /gene="hycD"
                     /locus_tag="OQQ26_003991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycD"
                     /protein_id="HCS1859268.1"
                     /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSLLPQLGDLITLLY
                     LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
                     TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
                     VMKWGISLKQLVVLQMFVGVFIPWGQMETFTVGGLLLALVIAIVKLVVGVLVIALFEN
                     SMARLRLDITPRITWAGFGFAFLAFVSLLAA"
     gene            1859..3568
                     /gene="hycE"
                     /locus_tag="OQQ26_003992"
                     /pseudo
     CDS             1859..3568
                     /gene="hycE"
                     /locus_tag="OQQ26_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycE"
     gene            3578..4120
                     /gene="hycF"
                     /locus_tag="OQQ26_003993"
     CDS             3578..4120
                     /gene="hycF"
                     /locus_tag="OQQ26_003993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HCS1859269.1"
                     /translation="MFTFIKKVIKTGMATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
                     ACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
                     QKCLVPSDRIELTRHMKEAI"
     gene            4120..4887
                     /gene="hycG"
                     /locus_tag="OQQ26_003994"
     CDS             4120..4887
                     /gene="hycG"
                     /locus_tag="OQQ26_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycG"
                     /protein_id="HCS1859270.1"
                     /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD
                     CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
                     APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
                     GLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQ
                     LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR"
     gene            4884..5294
                     /gene="hycH"
                     /locus_tag="OQQ26_003995"
     CDS             4884..5294
                     /gene="hycH"
                     /locus_tag="OQQ26_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase assembly protein HycH"
                     /protein_id="HCS1859271.1"
                     /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
                     QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
     gene            5287..5757
                     /gene="hycI"
                     /locus_tag="OQQ26_003996"
     CDS             5287..5757
                     /gene="hycI"
                     /locus_tag="OQQ26_003996"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HCS1859272.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
                     NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
                     EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE"
     gene            5800..6555
                     /locus_tag="OQQ26_003997"
     CDS             5800..6555
                     /locus_tag="OQQ26_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001330736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859273.1"
                     /translation="MCAFLLSLVLPAQATSFTEYLPMSDSEYAQKRALKPLLTMPYDA
                     EQNWHFRKVGVAGVTLEKMPNDDSEWQLNGKDRAGKSWSVPVGVLQNMAGNAQLYRAD
                     LDRNGIQDLVIWRGISGNGLAPNAFLILMTFNQQGRPCVFQSDGFYTASETGIDDLLD
                     LQRNGHTQLLDMQFDSGYWITSLYQVKDAKWQRVHGWFGKLSYPALTRFTYTPNRKLV
                     LKPIAGRDPQSEDLALTQRCLIKGDVLDGVNQL"
     gene            complement(6624..>6829)
                     /locus_tag="OQQ26_003998"
     CDS             complement(6624..>6829)
                     /locus_tag="OQQ26_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HCS1859274.1"
                     /translation="ADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTL
                     ARTRKKSFWWYKKVIASNGEDLE"
BASE COUNT         1436 a         1793 c         1992 g         1608 t
ORIGIN      
        1 gctggcgtaa cgggtatcgc gctcgaacaa ccggcgctga ttgcccttgg tctggtcggt
       61 ggtctgtacc atctgcttaa ccatagcctg ttcaaaagcg tactgttcct cggggcgggg
      121 agcgtctggt tccgtaccgg tcatcgcgat atcgaaaaac tcggtggtat tggcaagaaa
      181 atgccggtta tctccatcgc tatgttagtc gggctgatgg caatggctgc gctgccgccg
      241 cttaacgggt ttgccgggga atgggttatc tatcaatcct tcttcaaatt gagcaatagt
      301 ggcgcgtttg ttgcccgtct gctggggccg ctgctcgctg tgggtctggc aattaccggt
      361 gcgctggcgg tgatgtgtat ggcgaaagtc tatggcgtca cgttcctcgg cgcgccgcgt
      421 accaaagaag ccgaaaacgc cacctgtgcg ccgctcctga tgagcgtaag cgtagtggca
      481 ctggcgattt gctgcgtaat tggcggtgtt gctgcgccgt ggctgctgcc gatgctgtct
      541 gctgctgtac ctctgccgct ggagcctgct aacaccaccg tttctcaacc gatgatcacg
      601 ttgctgctga ttgcctgccc gctgctgcca ttcatcatta tggcgatttg caaaggcgat
      661 cgtttgccat cgcgttcccg cggcgcggcc tgggtgtgcg gctacgacca cgaaaaatca
      721 atggtgatta ccgctcacgg ttttgccatg ccggtgaaac aggcgtttgc gccggtgctg
      781 aaactacgca aatggctgaa tccggtgtct ctggtgccgg gctggcagtg cgaggggagt
      841 gcgttgctgt tccgctggat ggcgctggtt gaactggcgg tgctggtggt gattattgtt
      901 tcacgaggag cctgagaatg agtgttttat atccgttaat tcaggcgctg gtgctatttg
      961 ccgttgcgcc gctgctctcc ggtataaccc gcgtggcgcg cgcccgctta cataaccgtc
     1021 gtgggccggg tgtgttgcag gagtatcgtg acattatcaa actgctgggc cgccagagcg
     1081 ttggcccgga tgcctccggc tgggtgttcc gcctgacgcc gtatgtgatg gtgggcgtca
     1141 tgctgactat cgctactgcg ctgccggtgg tgaccgttgg ttctctgctg ccgcaactgg
     1201 gcgatttgat caccttactg tatctctttg ccatcgcgcg tttcttcttt gccatttccg
     1261 gtctggatac cggtagcccg tttactgcta tcggcgcgag ccgtgaagcg atgcttggcg
     1321 tgctggtcga accgatgctg ctgcttggtc tgtgggttgc cgcacaggtt gccggttcca
     1381 ccaacatcag caacatcacc gacaccgttt atcactggcc gctgagccag agcatcccgc
     1441 tggtgctggc gctctgtgcc tgtgcattcg ccacctttat cgaaatgggc aaactgccgt
     1501 ttgacctggc ggaagccgag caggagttgc aggaaggccc gctctccgaa tacagcggta
     1561 gcggctttgg cgtcatgaaa tggggtatca gcctgaaaca gctggtggtg ttgcagatgt
     1621 tcgtcggggt gtttattccg tggggacaaa tggaaacttt caccgtcggt gggctgctgc
     1681 tggcgttggt gattgccatc gtcaaactgg tggtcggcgt cctggttatc gcgctgttcg
     1741 aaaacagcat ggcccgtctg cgtcttgata ttactccgcg tattacctgg gctgggtttg
     1801 gctttgcatt tttagcgttc gtctccttgc tggcggcgtg attaaagaga gtttgagcat
     1861 gtctgaagaa aaattaggtc aacattatct cgccgcgctg aatgaggcat ttccgggcgt
     1921 cgtgctggac cacgcctggc agaccaaaga tcagctgact gtcaccgtaa aggtgaacta
     1981 cctgccggaa gtggtggagt ttctttacta caaacagggt ggctggctgt cggtgctgtt
     2041 tggtaacgac gaacgcaaac tgaatggtca ttacgccgtt tactacgtgc tgtcgatgga
     2101 gaagggcact aagtgttgga ttacggttcg cgtcgaagtt gacgccaaca aaccggagta
     2161 tccgtccgtg acgccgcgcg ttccggcggc ggtgtggggc gagcgcgaag tgcgcgatat
     2221 gtacggtttg attccggttg gtctgccgga tgaacgtcgt ctggtgctgc cggatgactg
     2281 gccggatgaa ctttatccgc tgcgtaaaga cagcatggat tatcgtcagc gtccggcacc
     2341 gactaccgat gctgaaacct acgagttcat caacgaactg ggcgacaaga aaaacaacgt
     2401 cgtgccgatt ggtccgctgc acgtcacttc tgacgaaccg ggtcacttcc gtctgttcgt
     2461 cgatggcgaa aacattatcg acgccgacta ccgtctgttc tacgtccatc gcggtatgga
     2521 aaaactggcg gaaacccgca tgggttataa cgaagtgacc ttcctctctg accgtgtgtg
     2581 cgggatctgc ggctttgctc acagcaccgc ctacaccacg tcggtggaaa acgcgatggg
     2641 tattcaggtg ccagaacgcg cgcagatgat ccgtgccatt ctgctggagg tggaacgcct
     2701 gcactcgcat ctgctcaacc tcggcctcgc ctgtcacttt accggcttcg actccggctt
     2761 tatgcagttc ttccgcgtgc gtgaaacctc catgaaaatg gcagagatcc ttaccggtgc
     2821 gcgtaaaacc tacggcctga acctgatcgg cgggattcgt cgcgatctgc tgaaagatga
     2881 catgatccag acccgccagc tggcgcaaca aatgcgtcgt gaagtgcagg agctggtgga
     2941 tgtgctgctg agtacgccga acatggaaca acgcaccgtc ggcattggtc gtctggaccc
     3001 ggaaatcgcc cgcgatttca gtaacgttgg cccgatggtt cgcgccagcg gtcacgcccg
     3061 cgatactcgc gccgatcacc cgtttgtcgg ttatggcctg ctgccaatgg aagtccacag
     3121 cgagcagggc tgcgacgtta tttcccgtct gaaagtgcga atcaacgagg tctataccgc
     3181 gctgaatatg atcgactacg gtctggataa cctgccgggc ggtccgctga tggtggaagg
     3241 ctttacctac attccgcacc gtttcgcgct gggctttgcc gaagcgccgc gcggcgacga
     3301 tatccactag agcatgaccg gcgacaacca gaagctgtac cgctggcgct gccgtgccgc
     3361 gacctacgcg aactggccga ccctgcgcta catgctgcgt ggcaataccg tttccgatgc
     3421 gccgctgatt atcggtagcc tggacccttg ctactcctgt accgaccgca tgaccgtagt
     3481 cgatgtgcgt aagaagaaga gcaaagtggt gccgtacaaa gaactcgagc gttacagcat
     3541 tgagcgtaaa aactcgccgc tgaaataagg aatcgccatg tttaccttta tcaaaaaagt
     3601 catcaaaacc ggcatggcga cctcgtctta tccgctggag ccgattgcgg ttgataaaaa
     3661 cttccgtggt aagccagagc agaacccgca gcagtgcatc ggctgcgcgg cctgcgtcaa
     3721 tgcctgcccg tcaaacgcct taacggttga aactgacctc gctacaggag aacttgcgtg
     3781 ggagtttaat ctcgggcgct gcatcttttg tggacgttgc gaagaagtct gcccgacggc
     3841 ggcaatcaaa ctgtcgcaag agtacgaact ggcggtgtgg aagaaagaag acttcctgca
     3901 acaatcccgc ttcgcgctgt gcaactgtcg cgtctgcaat cgtcctttcg ccgtccagaa
     3961 agagatcgac tacgccattg cgctgcttaa gcacaatggt gacagtcgcg cggaaaacca
     4021 ccgcgaaagc tttgagactt gcccggaatg taagcgccag aaatgcctgg tgccgtccga
     4081 ccgtattgaa ctgactcgcc atatgaaaga ggccatctga tgagcaattt attaggcccc
     4141 cgtgacgcca acggcattcc ggtaccgatg acggtggatg aatccatcgc cagcatgaag
     4201 gcgtcgttac tgaaaaaaat caaacgttct gcctacgttt accgcgtgga ctgcggcggc
     4261 tgcaacggct gcgaaatcga aattttcgct acgctttcgc cgctgtttga tgcagaacgc
     4321 ttcggcatta aagtcgttcc ttcaccgcgt catgcggata ttttactgtt taccggcgcg
     4381 gtcacccgtg caatgcgatc ccctgcgctg cgtgcgtggc agtccgcgcc ggaccctaaa
     4441 atctgtatct cctacggtgc ctgcggtaac agcggtggca ttttccacga tctctactgc
     4501 gtgtggggcg gtacggataa aatcgtcccg gtggatgtct acattcctgg ctgcccgcca
     4561 acgccagccg ccacgctgta cggctttgca atggcgctcg gcctgctgga gcagaaaatt
     4621 cacgcccgtg ggccgggtga actggatgaa caaccggcgg agatcctgca tggcgatatg
     4681 gtgcagccgc tgcgcgtgaa agtggatcgc gaagcacgtc gcttggcggg ttatcgttac
     4741 ggtcgccaga ttgccgatga cttcctgacg caattagggc agggcgaaga acaggttgca
     4801 cgctggctgg aagcggaaaa cgatccgcgt ctgaacgaga ttgtcagcca tctgaatcat
     4861 gttgttgaag aggcgcgtat ccgatgagtg aaaaggtggt gttcagtcaa ctgagccgta
     4921 aatttattga tgagaacgat gccacgcccg ccgaggcgca gcaggtggtc tattacagcc
     4981 tggcgattgg tcaccacctt ggggttatcg attgcctgga agcggcgctc acctgcccgt
     5041 gggatgaata tctggcatgg attgccactc tggaggcggg cagcgaagcc cgccgcaaaa
     5101 tggaaggcgt gccgaaatat ggcgagatcg tcatcgacat taaccatgtg ccgatgctgg
     5161 ccaacgcatt cgataaagcc cgggcagcgc aaacttcgca gcagcaggaa tggagtacaa
     5221 tgctgttaag tatgctgcat gatattcatc aggaaaacgc catctatttg atggtgagga
     5281 gactgcgtga ctgacgtttt actctgtgtt ggcaatagca tgatgggcga tgatggcgca
     5341 ggcccgctgt tggcggaaaa gtgcgccgcc gcgccgaaag gtaactgggt ggtgattgac
     5401 ggcggaagcg caccggaaaa cgacattgtc gccatccgtg aactgcgccc gacacgactg
     5461 ctgattgtcg acgccacgga tatggggcta aatcccggcg aaatccgcat catcgacccg
     5521 gatgacatcg ctgagatgtt tatgatgact acccataaca tgccgttgaa ctatcttatc
     5581 gaccagttga aagaagatat tggcgaagtg attttcctcg gcatccagcc ggatatcgtc
     5641 ggcttttact acccgatgac ccagccgatt aaagatgcgg tggaaactgt ttatcaacgt
     5701 ctggaaggct gggaagggaa cggcggcttc gcgcagttag cggtggaaga agagtagttt
     5761 ttcagtaagg aattcaggga attgaacatc agaacaggga tgtgcgcttt tttattgagc
     5821 ttagtgctgc ctgcacaggc caccagcttt accgaatatc tgccgatgag tgacagcgaa
     5881 tacgcgcaaa agcgggcgct gaaacctctc ctgaccatgc cttatgatgc cgagcaaaac
     5941 tggcatttta gaaaagtcgg cgttgctggc gtgacgcttg aaaagatgcc aaatgatgat
     6001 agtgaatggc aattgaacgg taaagatcgc gccggtaaat cctggtctgt gcctgtgggg
     6061 gtgctgcaaa atatggcggg taatgcgcaa ctttaccgtg ccgatcttga tcgtaacggc
     6121 attcaggatc tggttatctg gcggggtatt tcaggaaatg gtctggcacc taacgcgttt
     6181 ttgattctga tgacctttaa tcagcaaggt cgcccgtgtg tttttcagtc cgatggtttt
     6241 tataccgcaa gtgaaactgg cattgatgat ttgctggatt tacaaaggaa tggccacacg
     6301 caattgctgg atatgcagtt tgattccggt tactggataa ccagtctgta tcaggtaaaa
     6361 gacgccaaat ggcagcgtgt tcacggctgg tttggcaagt taagctatcc cgcgctcacg
     6421 cgttttactt atacccccaa ccgtaaactc gtcctcaaac ccatcgccgg gcgcgacccg
     6481 caatcggaag atctggcact gacgcagcgt tgcttgataa agggggatgt tcttgatggg
     6541 gtgaaccagc tctaatgcca acccccagat tgcccgatgc gcaacgctta tcgggcctac
     6601 ctggttcgtg cgactgtagt tgcttactct aaatcttcac cgttactggc aatcactttt
     6661 ttataccacc agaatgattt cttacgcgtg cgcgccagcg taccgttgcc tgcgtcgtca
     6721 cggtcaacaa agacaaaacc gtagcgtttg ctcatttcac ccgttgaggc ggaaactaaa
     6781 tcaatacagc cccaggtggt gtagcccatc agcggaatgc catctgcaa
//
LOCUS       DAJVTL010000187         6663 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.189, whole genome shotgun sequence.
ACCESSION   DAJVTL010000187 DAJVTL010000000
VERSION     DAJVTL010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6663
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.189"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..287)
                     /locus_tag="OQQ26_003999"
     CDS             complement(<1..287)
                     /locus_tag="OQQ26_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000867911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859275.1"
                     /translation="MKVQAVGLFWFRDAIQYHELKNIFTDADVLSDSYTEWKHDAEKL
                     IKRVERSGQRVIKVEADTAEFIAWCTSEGIGINAEGRMQFASFKAYQQLLS"
     gene            407..1114
                     /locus_tag="OQQ26_004000"
     CDS             407..1114
                     /locus_tag="OQQ26_004000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004998217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCS1859276.1"
                     /translation="MNTAIFNDKVSMTSVEIAELVGSQHGNVRISIERLAKRGVIQLP
                     AMQKVENEQSFSQNKFTNAYIFEGEQGKRDSIIVVAQLCPEFTARLVDRWRELEEQVR
                     KPMSEIEMVAAMALEAVRQQKRITQVEEKVSHVAETVEQIKKGTIREGYAGYRQLKAK
                     TGMSDAKCRTLVNAYNIPTDTHEFLTPDGLLARREIVAVEPFLKAFHHMMCGAVQRGT
                     RWYHPRMGLFQATGWQV"
     gene            1134..1310
                     /locus_tag="OQQ26_004001"
     CDS             1134..1310
                     /locus_tag="OQQ26_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001197745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1859277.1"
                     /translation="MQVLNRWFRDGRGRRVHVIRWEPETQRVIYLRDGYPYECFSPLW
                     LFRRDFVECEAPPE"
     gene            complement(1332..1691)
                     /locus_tag="OQQ26_004002"
     CDS             complement(1332..1691)
                     /locus_tag="OQQ26_004002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000860148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1859278.1"
                     /translation="MRTVTIRIESMDNFTADVLSAFQEAATGAKATRENVISFPDWQM
                     MHKVLTPKRMDILMAMTGAGEMSIRKIAALVGRDVKSVHTDVTALISNGLLEKSERGT
                     SFPYDDIHFDFTLGKAA"
     gene            complement(1693..1980)
                     /locus_tag="OQQ26_004003"
     CDS             complement(1693..1980)
                     /locus_tag="OQQ26_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001141117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859279.1"
                     /translation="MPSRLYKQFIRHLGESEYIRIRIWEVEPAVLGSQHNYKYSMAYV
                     VDGMCVMRYDNERGKGDHKHIGSQEVSTSFVTIEQLLADFLADVESIRRGI"
     gene            1945..2883
                     /locus_tag="OQQ26_004004"
     CDS             1945..2883
                     /locus_tag="OQQ26_004004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000129023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HCS1859280.1"
                     /translation="MTDELFIQSGWHLKLPLVLVVNNNNKASRCPQLQHFDIDSASPG
                     RYTVSAPYKAGAGIGVLKFNIEHNRAHAVFSCHEHCYAQIMVGRAGASQDAPGSMLTG
                     YANPVRLTTSVIGVPCGEFFEFNIGAVTMTTLPTLSQPEIAIVDGQAVTSSLAVADFF
                     SKRHDYVLKKIRILDCSPEFCARNFAETSILVHQPNGGTRKLPCYHITRDGFAFLAMG
                     FTGKRAARFKEAYINAFNLMEKSLSGADASDMSAVARNARGVYLHQIWISQLYPMLKA
                     VESPLAGKLYDRVGDAVFGAALVDSRLNGSDKEGRP"
     gene            2880..3113
                     /locus_tag="OQQ26_004005"
     CDS             2880..3113
                     /locus_tag="OQQ26_004005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000621187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859281.1"
                     /translation="MIRHIVNSLYHRYNRCPRVGQWFTTSNGHVLRVCLVNTESQKVV
                     CQVQGRTHTLSYPLVAFQSGKMFKRLGGGYASV"
     gene            3100..4008
                     /locus_tag="OQQ26_004006"
     CDS             3100..4008
                     /locus_tag="OQQ26_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HCS1859282.1"
                     /translation="MRPSDLLLDFGHPVAYYPGLVKYMGSPHAVIFFGQIFYWQDKAH
                     AAEGVHKTREEIQHETGLTFEQQAVARKHLVSRGILVETNKRLEHKMFYRIDCERLNE
                     IINENNQFSRNGETRFRETVKPNFAEEGKPSPRTRETPRRGEGKTNFDLTENTTEITS
                     ENTTESKNTIGASADASAPARSARQEYSPEFEQAWQEYPKRAGGNSKSAAFKAWKARL
                     REGIKPEAMLDGVKRYAAWVRATGNTGTQFVKQAATFFGPDRHFEDFWQQPAAPGGGR
                     QRQVDVLAGLGAMSDKFGKSSDKLTF"
     gene            4019..4897
                     /locus_tag="OQQ26_004007"
     CDS             4019..4897
                     /locus_tag="OQQ26_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HCS1859283.1"
                     /translation="MMTFNLREQQKRLQARMDELRAEIAFAQKGEKPWPYRSCLMREG
                     RGYCEKHGEYHTHILVWSDRNGEDREKISCCPDCLIAEANDLTMELSSIKAEELTDNA
                     GIALRFRDCEFDNYLEVNPDAARNLAACRRYAENWPDMLENGTSLVMTGSCGTGKNHL
                     AVSMAKHIIRNYLASVEITDVMRLTRAVKNCWRNDSEKTADEVIERYASMDLLIIDEV
                     GVQFGSAAEMAILQEIINARYESILPTILISNLSPEELWAFISPRIADRITDGGRNWL
                     SFNWPSYRSRIRGVAA"
     gene            4894..6285
                     /locus_tag="OQQ26_004008"
                     /pseudo
     CDS             4894..6285
                     /locus_tag="OQQ26_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706614.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
     gene            6282..6539
                     /locus_tag="OQQ26_004009"
     CDS             6282..6539
                     /locus_tag="OQQ26_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859284.1"
                     /translation="MNNQTMTFTPEQLRKHAQEMLRHAEQLEKTGITKDAIRKDMVPA
                     LRELMQAKHRAQKAVDELVDCVAELETRVGKFEKLVQEVLR"
BASE COUNT         1710 a         1570 c         1763 g         1620 t
ORIGIN      
        1 tcgctgagaa gttgttggta agccttaaag gatgcgaact gcattctacc ttcggcattg
       61 attccaatgc cttcgcttgt gcaccaggcg atgaactcgg ctgtatccgc ttcaacttta
      121 ataactcgtt gcccgcttct ttcgacacgc ttaatcaatt tttcagcgtc gtgtttccac
      181 tcggtgtaac tgtcggagag cacatcagca tcagtaaaaa tatttttgag ctcatgatac
      241 tgaatcgcat cgcgaaacca gaataaacca acggcctgaa ctttcatgtc gaacctcctt
      301 tggttctttt gtttataggg atcaaaagga taactgaagg atggttcggc accaacaagt
      361 acgaatgtgc ggaatcttaa aagaatttat ccgtaaggag atggcagtga acaccgcaat
      421 ttttaacgac aaagtatcca tgaccagcgt tgaaatcgca gagctggttg gaagtcaaca
      481 cggcaatgtc agaatatcaa tagagcgtct ggcaaaacgc ggggtgattc aacttcctgc
      541 aatgcaaaaa gttgagaacg aacaatcatt tagccaaaac aaattcacaa acgcatatat
      601 tttcgaaggc gaacaaggca aacgcgacag catcattgtc gtcgcacaac tttgcccgga
      661 attcactgcc cgcctggtag atcgttggcg cgaactggaa gagcaggtgc gcaaaccaat
      721 gagcgaaatc gaaatggttg ccgcgatggc tcttgaagcc gttcgccagc agaaacggat
      781 cactcaggtg gaagaaaaag tcagccatgt tgccgaaaca gttgagcaaa tcaaaaaggg
      841 taccattcgt gagggctatg ccggatatcg ccagctgaaa gcaaaaaccg gtatgtcaga
      901 tgcgaaatgt cgcacgcttg taaatgcata caacatcccg acagacactc atgaattttt
      961 gacgccagat ggattactgg cacgtcgtga aattgttgct gtggaaccgt ttctgaaggc
     1021 gtttcatcac atgatgtgtg gtgccgttca gcgtggtacc cgctggtatc acccgagaat
     1081 gggcctgttt caggctactg gctggcaggt gtgacgatgt ttacgggtaa tttatgcaag
     1141 tcctcaatcg ctggttccgt gatggcagag ggcgccgcgt ccacgttata cgctgggagc
     1201 ctgaaacaca gcgggttatt tatctgcgtg atggttatcc atatgaatgt ttcagcccgt
     1261 tgtggttgtt caggcgtgat tttgtggagt gtgaagcgcc gccggaatga cggcacggta
     1321 tatacgaaaa attacgccgc cttgcccagc gtaaaatcaa agtggatgtc gtcatacggg
     1381 aatgacgttc cgcgctcgct tttttccagt aaaccgttgc tgatgagtgc ggtcacgtca
     1441 gtatgcacgc tttttacatc acgtccaacc agggctgcaa tttttcggat ggacatttct
     1501 ccggcaccag tcattgccat cagaatgtcc atgcgttttg gtgtcagtac cttatgcatc
     1561 atttgccagt caggaaatga aataacgttt tctctggttg cttttgctcc ggtagctgct
     1621 tcctggaacg cagacagcac atcagccgtg aaattatcca ttgactcgat tcggattgtt
     1681 acggttctca tgtcagatac ctctgcggat ggattcaacg tcagccagaa aatcagcgag
     1741 cagttgttca atggtgacaa agctggtgct gacttcctga ctaccaatgt gtttgtgatc
     1801 gcctttaccc cgttcgttgt cgtaacgcat cacacacatg ccatcaacga cataagccat
     1861 gctgtatttg tagttgtgct ggctacccaa tacagcaggc tccacttccc atatgcggat
     1921 tcgtatgtat tcagattcac cgagatgacg gatgaactgt ttatacagtc tggatggcat
     1981 ttaaagcttc ctctggttct tgttgtaaac aataacaaca aggcttcgcg ttgtccacag
     2041 ctacaacatt ttgatattga ttctgcaagt ccgggacgtt acactgtctc tgcaccttat
     2101 aaagcgggtg ccgggattgg cgtcctgaaa ttcaatatag agcataaccg cgctcatgcg
     2161 gttttttcgt gtcatgagca ttgctacgcc caaattatgg tggggcgtgc aggggcatcg
     2221 caagatgcgc cgggttctat gttgaccggt tacgccaacc ctgtacgtct caccacctct
     2281 gtgattggcg tcccatgtgg tgagttcttt gaattcaaca taggggctgt caccatgact
     2341 acactcccaa ccctctctca acctgaaatt gccatcgttg atggtcaggc tgttacttca
     2401 tctctggctg ttgctgactt cttctctaaa cgtcatgact atgttctgaa aaagatccgc
     2461 attttggatt gttctccaga gttttgtgcc cgcaattttg cggagacatc aattttggta
     2521 caccagccca acggcggtac tcgcaaactt ccttgctacc acatcacccg cgacggcttc
     2581 gcattcctgg caatgggctt cactggcaaa cgtgctgccc gcttcaaaga ggcatacatc
     2641 aacgccttta acctgatgga gaagagttta tcaggtgccg atgcgtctga tatgtcagct
     2701 gtcgcacgaa acgccagagg cgtatacctg catcaaatct ggataagcca gctttatcca
     2761 atgcttaagg ccgttgagtc tccgctggct ggcaaactgt acgaccgtgt aggtgatgct
     2821 gtttttggtg ctgcacttgt tgattccaga ctgaatggtt ctgacaagga ggggcgccca
     2881 tgatccgcca catcgttaat tccctgtatc accgatacaa ccgttgcccc cgagtggggc
     2941 agtggttcac caccagcaac ggccacgttc tgcgggtttg cctggtcaat acagaaagcc
     3001 agaaggttgt ctgccaggtt cagggacgta ctcataccct gagttatccg ctggtggcgt
     3061 ttcagtccgg aaaaatgttt aaacgcctgg gaggtggcta tgcgtccgtc tgatcttctg
     3121 ctcgattttg gacatccggt tgcttattac cctgggctcg ttaaatacat gggaagtccg
     3181 cacgctgtta ttttctttgg tcagattttt tactggcagg ataaagcaca tgcagcggaa
     3241 ggcgtacata aaacgcgtga agagatacaa cacgaaaccg gacttacatt tgaacaacag
     3301 gctgtagcgc gtaagcatct tgtgtccaga ggcattttgg ttgaaaccaa caagcgtctt
     3361 gagcacaaaa tgttctaccg tatagattgt gagcgcctta atgaaattat caatgaaaac
     3421 aatcagtttt cccgaaatgg ggaaacccgt tttcgggaaa ctgtaaaacc caatttcgcg
     3481 gaggagggaa agccttcacc gcggacacgg gaaacccctc gccgcggaga agggaaaacc
     3541 aatttcgatc ttacagagaa tacaacagag attacttcag agaatactac agagagtaaa
     3601 aacactattg gcgcatccgc tgacgcgtct gcaccagcgc gttctgcccg acaggaatat
     3661 tcaccggaat ttgaacaggc ctggcaggaa tatccaaaac gtgctggtgg taactcaaaa
     3721 tccgcagcct tcaaagcctg gaaagcccgg ctcagggagg gaataaaacc tgaagccatg
     3781 cttgatggcg tgaaacgcta tgctgcctgg gtacgtgcca caggaaatac cggcacacag
     3841 ttcgtgaagc aggctgcgac gttctttgga cccgatcgtc acttcgaaga cttctggcaa
     3901 cagccagccg ctcccggagg tgggcgacag cgacaggtcg atgtcctggc tggcctggga
     3961 gccatgtctg acaaattcgg taaatccagt gacaaactga cattctgagg tgacagcgat
     4021 gatgacgttt aacctgcgtg aacaacaaaa aagactacag gcgcgaatgg atgagttacg
     4081 ggcagagatt gcatttgctc agaagggcga aaagccatgg ccttatcgtt cctgcctgat
     4141 gcgtgaaggt cgcggatatt gcgaaaaaca tggcgaatat cacacgcata tactggtgtg
     4201 gagcgatcgt aatggcgagg acagagaaaa aatttcatgc tgccctgact gcttaatcgc
     4261 tgaggccaac gatttgacca tggagctgtc gtccatcaag gcggaagagc tgactgataa
     4321 cgccggaatt gccctgcgtt ttcgggactg cgagtttgat aattatctgg aggttaatcc
     4381 tgacgcagcc aggaatcttg cggcctgtcg ccgctatgcg gagaactggc cagatatgct
     4441 ggagaacggt accagtcttg ttatgaccgg tagttgcgga accgggaaaa atcatctggc
     4501 ggtatcaatg gcaaaacaca tcatccgtaa ctatctggcc agtgtggaga tcaccgacgt
     4561 gatgcgcctt acccgtgctg tgaaaaattg ctggcggaat gacagcgaaa aaacagcgga
     4621 tgaagttatt gagcgttatg cgtcaatgga tttgctgatc atcgacgaag ttggcgttca
     4681 gtttggcagc gcggctgaaa tggctatttt gcaggaaatt atcaacgcca ggtacgaaag
     4741 tatcttgccc accattctga tcagtaacct ctcaccggaa gagttgtggg cgttcatcag
     4801 tccccgaatt gccgacagga tcacagacgg gggacgcaac tggttgtcgt ttaactggcc
     4861 cagttaccgt tctcgtatca gaggtgtggc tgcatgacaa ctccagtatg gcgtaacgat
     4921 gaccttgaag gcgctgtcat cggcgcgttc tttctgcgcg gagcagatcc tgaagtgatg
     4981 gatattctgg ccacactgcc agcggacgtt ttttctgtac gagcgtatca ggatatctat
     5041 acaggcatct gcagacaggc ccgtgtttca ggagtgattg accccgtgct gttgtgtaat
     5101 gagatgccgg aacttgcccc ggtgattact gataccgggc gtaaaacctg ggtgaagtct
     5161 tcactggagc actatgttgc agcgttgcgg cgcaatgccg cactgcgcga tgcagaaaaa
     5221 acactgaatg aggtgctgca gaaattacgt gatgcgcata cctgtgaagc agctgaagat
     5281 gccctgaagg atgcgcagaa catgatggtc acactgtcga caggaaaggg cgtcattcag
     5341 ccggtacata ttgatgatgt gcttccggaa gtggttgagc gtgttgaatg ccggaatcag
     5401 gggctggaga aatccaggac gttgatgacc ggtattgatg aactggacgc aaaaacaggc
     5461 ggtatggagc cctgagacct ggtattcatt gccgcccgtc cttcgatggg gaaaaccgaa
     5521 cttgcgctgg acatcatcga caaggtgact gagcaggggc atggtgtgct tctgttcacc
     5581 atggagatgg cgaacatcca gattggtgaa cgtatggtgt ctgcggctgg agggatgcca
     5641 gtatcacgcc tgaaatctgt ggctcacttt gaagatgaag actgggcgcg tttctcgcaa
     5701 ggggtggggc ggatgaccgg gcgcaatatc tggatggtgg accaggcgaa cctggccatt
     5761 gatgagatat gcgcaacaac gaaacaccac ctgattaaat atccggaaac ggcgctggtg
     5821 gtggttgatt atctcgggct gataaaaacc cgaaccacgg ggcgtcatga ccttgccgtg
     5881 ggtgaaatct caaaggggct taaaggcctg gcaaaatccg gtggttttcc gttgattgcg
     5941 ctgagccagc tctcccgcgg tgtggagtcc agacccaata aacgtcccat gaactcagac
     6001 ctgaaaaatt ccggagaaat agaggcggat gcagacatca ttctgatgct ttacagggat
     6061 gaagtgtaca acccggatac gcaggccagg ggcatcgcag aaatcaatat cacgaaacaa
     6121 cgtaacggtt ctctgggaac gatttaccgg cgtttttata acggacattt tctgcctgtg
     6181 gaccaggaaa gtgcacgggt gctttccact cccatgaagc ccggcaatcc gcgcagatac
     6241 agtaataaac gaactgacag cagtaagatg gagcgtttct tttgaacaac cagacaatga
     6301 cttttacccc tgaacaattg cgtaaacacg cgcaggaaat gctgcgtcat gctgaacaac
     6361 tcgaaaaaac gggcataaca aaagacgcta tccgtaaaga tatggtaccc gcgcttcggg
     6421 aactgatgca ggcgaagcat cgcgcacaga aagcagtaga tgagctggtg gactgtgtgg
     6481 cagagctgga aaccagagtc ggaaagtttg aaaaactggt gcaggaggtg ctgcgctgat
     6541 gcgccatgag tttattttac cttatccgcc gacggtgaat acttactggc gacgtcgtga
     6601 caacacatat tttgtatcaa aagccggtga gcgttatcgc cgggatgtgg cgcttattgt
     6661 ccg
//
LOCUS       DAJVTL010000188         6606 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.190, whole genome shotgun sequence.
ACCESSION   DAJVTL010000188 DAJVTL010000000
VERSION     DAJVTL010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6606
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.190"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            7..438
                     /locus_tag="OQQ26_004010"
     CDS             7..438
                     /locus_tag="OQQ26_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HCS1859285.1"
                     /translation="MALNLASGEGNFFIRPGGVFYVAGDKVGIVRLDAFKTSKEIQFA
                     VQSGPMLMENSVINPRIHPNVASRKIRNGVGINKHGNAVFLLSQQATNFYDFACYAKA
                     KLNVEQLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG"
     gene            complement(585..2747)
                     /gene="uvrD"
                     /locus_tag="OQQ26_004011"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             complement(585..2747)
                     /gene="uvrD"
                     /locus_tag="OQQ26_004011"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HCS1859286.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIA
                     WLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAET
                     IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG
                     EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV"
     gene            complement(2831..3547)
                     /gene="yigB"
                     /locus_tag="OQQ26_004012"
     CDS             complement(2831..3547)
                     /gene="yigB"
                     /locus_tag="OQQ26_004012"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HCS1859287.1"
                     /translation="MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHP
                     ALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAM
                     INFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHG
                     RSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTW
                     DSRLLPHLEISRLASLTSLI"
     gene            complement(3547..4443)
                     /gene="xerC"
                     /locus_tag="OQQ26_004013"
     CDS             complement(3547..4443)
                     /gene="xerC"
                     /locus_tag="OQQ26_004013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HCS1859288.1"
                     /translation="MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENG
                     LKNWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVS
                     APKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
                     DLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR
                     NVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYT
                     HLDFQHLASVYDAAHPRAKRGK"
     gene            complement(4440..5147)
                     /locus_tag="OQQ26_004014"
     CDS             complement(4440..5147)
                     /locus_tag="OQQ26_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HCS1859289.1"
                     /translation="MKQLGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVP
                     HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSL
                     DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
                     HYLGPLNGPELLVVLPETKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLY
                     EIALMLPELLERWIERV"
     gene            complement(5144..5968)
                     /gene="dapF"
                     /locus_tag="OQQ26_004015"
     CDS             complement(5144..5968)
                     /gene="dapF"
                     /locus_tag="OQQ26_004015"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HCS1859290.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQ
                     LLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG
                     SGACAAVAVGIQQGLLDEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL"
     gene            complement(6005..6208)
                     /locus_tag="OQQ26_004016"
     CDS             complement(6005..6208)
                     /locus_tag="OQQ26_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HCS1859291.1"
                     /translation="MKNVFKALTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVET
                     QTQSTVPDKNDRATGDGPSQVNY"
     gene            6367..>6606
                     /locus_tag="OQQ26_004017"
     CDS             6367..>6606
                     /locus_tag="OQQ26_004017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000580503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859292.1"
                     /translation="MIGTSRQDGFMHYRNVVCLLSCSLFLSSAWGCRLSAPEHNIYQK
                     QGKGVVYLRPYKETNLSLPDVNYKSLRRLPNLLIDP"
BASE COUNT         1477 a         1868 c         1709 g         1552 t
ORIGIN      
        1 cagaaggtgg cgttaaatct cgcttcaggt gaagggaatt tctttatccg tcctggcggc
       61 gtgttttatg tcgcgggaga taaagtcggc atcgttcgtc tggatgcctt caaaaccagt
      121 aaagaaattc agtttgcggt gcagtcaggg ccaatgttga tggaaaacag tgtaattaat
      181 ccgcgtattc atcccaacgt cgcctcacgt aaaattcgta acggtgttgg gattaataaa
      241 catgggaatg ccgtgttttt gttgagccag caggcgacaa atttttatga ttttgcctgt
      301 tatgccaaag cgaaactgaa cgttgagcag ctgctttatc ttgatggcac gatttcacat
      361 atgtatatga aaggcggggc aatcccgtgg caacgctatc cttttgtcac catgatttcc
      421 gtcgagcgga aaggttagaa tgatagtttt gtgtcagata ctaaatatgc tgctgatgcc
      481 ggatgcggcg taaacgcctt atccggccta catgacgttg caatttattg aatctgaatg
      541 attttttagg ccaaataagg tgcgcagcac cgcatccggc aacgttacac agactccagc
      601 cgggcgtaag ccgccaccag ccatttgatt ccctggccct ggaacgccac ctgcaaacgg
      661 ctatgttcac cgctgccttc catattgacg atggtgcctt caccaaactt agcgtggcgt
      721 acacgctggc cgagcttgta gccgctgtcg ttctcgacca tcggcgtacc catccgctga
      781 tggctaaccg ggcggcttac cgtggcgcgc aggcgcacct cttccacaca ctcttccggc
      841 aactcaccga taaagcgcga cgggcgatgg taaacctctt tgccatacag acggcgggtt
      901 tccgcgtagg tcagcgtcag tttctgcatc gcgcgggtta caccaacgta ggccagacgg
      961 cgttcttctt ccagacgccc gccttcatcc agcgacatct ggcttgggaa catgccctct
     1021 tccataccaa cgataaacac ctgaggaaac tccagacctt tcgccgagtg tagcgtcatc
     1081 aactgcaccg catcctgcca ggtatccgcc tgcccttcac ctgcttccag tgccgcatgg
     1141 gagaggaacg cctgcagcgg cattaaatct tcgtcttctt cgttgtagct gaactggcgc
     1201 gttgccgtca ccagttcctc taagttttcg atacgcgtct gacctttttc gcccttctcc
     1261 tgctcgtaca tggtgcgcag gccggagtct ttaattaccc ggtcagtctg tacatgcagc
     1321 ggcatatcgg cagtttcttg cgctaaggca tcgattaatt ccataaatcg ctgcaaggcg
     1381 ctggcagctc gtccggcgag ggctttttcc tgcaacagtt cacgacatgc ctgccagagt
     1441 gttaactggc gatcgcgcga tgtctgacgt accacgtcca gcgtccggtc accaataccc
     1501 cgcgttggcg tattcaccac acgctcaaag gccgcgtcgt cgttacggtt ggcaatcagg
     1561 cgcagatacg agagcgcatc tttgatttcc tggcgttcga agaagcgcat cccgccgtaa
     1621 atacggtacg gcatactcgc ctgcaacagt gcttcttcca gcacacgcga ctgggcgtta
     1681 ctgcggtaga gaatggcgca ctcggcaagc gccccgccgt tgtcctgcca ggttttgatg
     1741 cggttaacca caaaacgcgc ttcatcgagt tcgttaaaag cgcaatagag ggaaataggc
     1801 tcaccgtccg cgccatcggt ccacagtttt ttacccagac gcccgttatt gttttcaatc
     1861 agggcgttag cggcgctcag aatattgctg gtagagcggt agttttgctc cagacgaata
     1921 gtttcggcac cggggaaatc attaaggaaa cgctgaatat tctccacctg cgccccgcgc
     1981 cagccgtaga ttgactggtc gtcatcaccg acgatcatca ctttgccggt gtcgcccgcc
     2041 agcaggcgga tccacgcgta ctgaatgttg ttggtatcct ggaattcgtc caccaggata
     2101 ttggtaaaac gttcgcggta gtgttgcagg atatgcggct tgttaagcca cagttcgtgg
     2161 gcgcgcagca gcagctcggc gaagtccacc aggcccgcgc ggtcacacgc ttcctgatac
     2221 gcctgataca ccttctgcca ggtctgctcc accggattac cgtagctttg aatatgatgc
     2281 ggacgcaggc cttcatcttt ctggctgttg atgtaccaca ttgcctggcg cggcggccac
     2341 tgcttctcgt cgaggttcat ggctttgatc agacgcttaa gcaggcgtag ctggtcttca
     2401 ctgtcgagga tctggaaatc ctgcggcaga ttggcgtcca tatggtgcgc acgcagcagg
     2461 cggtgcgcca gcccgtggaa ggtgccgacc cacatgccgc cctggctggt gcccatcagt
     2521 tgcccgatac gatgacgcat ctccgccgcc gctttgttgg taaacgtcac agccataatc
     2581 gagtatggcg agcagttttc cacgctcatc agccaagcga tacgatgcac cagtacgcgc
     2641 gtcttaccac tgcccgcgcc cgccagcacc agaaggttgc tgcgtggcgc ggccaccgct
     2701 tcgcgctgtt tatcattaag gctgtcgagc aggtaagaaa cgtccattgg caccgccgcg
     2761 taaaaatagg ttgggcggag aagcgcaacg ccctccgcca aaaagctggg tatatataca
     2821 gatttgctga ttatatcagc gaggtcagag atgccaaccg ggaaatttcc agatgcggca
     2881 gtaaacggct gtcccaggtt tgcatcagat cgccattttc cggtctgatc caacaagctt
     2941 gcattccgct gcgaattgcc ccacccacgt cagtggtgag atcgtcccca acatgtaaga
     3001 tctcgccgat cggcacgttg agtttttccg cagccagaaa gtacatatcg ctgaacggtt
     3061 ttgagcgccc gtgcgggcca gcgcgcagca caaactcaaa ataatccccc aaaccaaaca
     3121 gttccggctg ggcgttaccg ttggtgatcg ccaccagcgg ccatttcttc gccagctgtt
     3181 ttaaggtgtc gtgagtttgc tgcgggacgt cgattcggct gcgccatttg gcaaagttaa
     3241 tcattgctgc gtgtgcgcct gcactggctt cttcggcact cagcccggcg tcgagcatcg
     3301 cttgttcaat cgaacgaaaa cgccaacgcg tcacgtcgtg ataaatctcg ggttccgctt
     3361 cccgtacggc ctggcgcagg cgttgcagat cttcattctg gaagctgcgc agcgccggat
     3421 gataattttg cacaaaggta agcgcctctc gctcggtgcg caaaatcacc ggacggttat
     3481 cgtaaagggt atcatccagg tcaaaggtga gcgccgagat gcgccccaaa ggccggtaaa
     3541 aacgcattat ttcccccgtt tggcgcgtgg atgcgccgca tcgtacaccg aggcaaggtg
     3601 ttgaaaatca agatgagtat agatttgcgt ggtggagagg ttggcatgac ccagcagctc
     3661 ctgcacacca cgaagatcgc cgctcgactc cagcatatgc gtggcgaacg agtgacgtaa
     3721 tttatgcgga tgaacgtgat tattcagccc ttgttttatg ccccattcgg caaagcgttt
     3781 ctgcacatta cgcgcggaga tacgcttgcc cagtttcgac agaaaaagcg cgtcgtcttc
     3841 gctaccaaac aggtcgcgca aatcaagcca gtgctcaatc cacgccacag cgttgcgacc
     3901 aatcggcagg cggcgctctt tgctgccttt ccccattacc cacacttcac cagactccag
     3961 gtcgaggtgt ttgatatcca gccccaccag ctcggaaaga cgcagacccg cgccgtacat
     4021 cacttccagc attgcacggt cgcgtacagc gaggggatcg ttgatatcaa tatccagcag
     4081 ccgattcata tcgtcgacgt cgatgttttt cggcagatga cgcggcgctt tcggtgccga
     4141 aactcctttc gccgggttag ctttgagttc gttctggctg accagccagt caaaaaagct
     4201 acgtagcgca gagagccgta acgccagact tgctgctccc agccctttac ggcgactgcg
     4261 tacagcaaaa ttacgcacca tcgtcacatc acattgctgc cagtttttca ggccgttttc
     4321 gctggcaaaa ttgatgatcg cctcaagctg acgctggtag ttaagcaggg ttatcgggct
     4381 aagctgacgt tccacgctca gataacgtag gtagcgttct acatcggtgt gtaaatcggt
     4441 catacgcgtt caatccaacg ctccagaagc tctggcaaca tcagcgcaat ttcataaagt
     4501 aactgcgttc cctgcccttg ttgatagtga ctggcatcgc gactggtaaa cagcacgaca
     4561 cccaaatcag catcgcttcc cagcatcgac atcgccaccg atcccaccgc tttcgtttcc
     4621 ggtagcacca ccagcagctc tggtccgtta agcggcccaa gatagtgctg ttcctgcccc
     4681 aaacgctgaa tacgcagcgg ttcgaaagac tgacggctta atgccagatg agtgtggttc
     4741 gacggcgcac ctaagcgcca gcgatctgga aacaggcgca gactcgcacc tgccaggccg
     4801 agatcgcgcg cccagcggtg aaagcgcatc agcatatcgt cgagactgct ggcggcggtg
     4861 agactgcgct gcaggtagag taggcgataa aacaggcctt cgttggcgat agcctgttcc
     4921 atcaacagcg ccatgttctc ttccagaaca tgaatatgat tacgtgcgcg ggccatgtgc
     4981 cactcgacca acgaaacggt gccgcgtacc ggatgcggca cacgtatcgc ttctactgcg
     5041 cgcgcattgc ggataaaaaa ctcaggattt ttaatcagat aatcgacaac cgcccggtca
     5101 tcaagctccg tgagtgtttc ctgcagttct tcccctagtt gcttcataga tgaataaatc
     5161 cgtcgtagac atgtaccgcc gggccagtca tatataacgg gtgacccgga cctttccagg
     5221 cgatatcaag acgaccgccg gggagttcca cgcgtacttc ttcgtccagc aaaccttgct
     5281 gaatccctac cgccaccgcc gcacacgcgc cgctgccgca ggcctgggtt tctcctgccc
     5341 cacgctcata aacgcgtaaa cgaatatgct cgcgcttaac cacttgcata aaaccgatat
     5401 tggcgcgctc cggaaaacgc tcgtggcttt ccagaacagg accaagcgtt tctaccgccg
     5461 cggtatcgac atcatcgacc tgaatcacgc aatgcggatt tcccatcgac accacgccgc
     5521 ataagattgt ctgctcggcg gcgcgcataa tataggtctt ttccgctttg ttagcgcgaa
     5581 acggcacggc ggaaggttcg aagttgggtt cgcccatatt tacgcggacc agatcatcat
     5641 cggtgacggt cagaaccatc cgcccgttgg cggtgctgac gcggatatca cgcttattgg
     5701 tcagtccttt cagacgcaca aaacgggcaa agcagcgcgc accgttgccg cactgcgcca
     5761 cttcactgcc atcagcattg aaaatgcgat agtgaaaatc cagttcagga tcatacggcg
     5821 gctcaaccac cagcagttgg tcaaacccta cccccaggtg ccgatcagcc aggcgacgaa
     5881 tcagctccgg tgaaaaaaag acattctgcg ttaccgcgtc gacgaccata aaatcgttgc
     5941 caaggccatg cattttcgag aactgcatca tttactccaa tcacgcgggt acagaaactg
     6001 acttttagta attcacctgg gatggaccat cgccagtggc gcgatcgttt ttatccggca
     6061 ccgtggattg cgtttgcgtc tctaccggtt tggtcggcgg cggtgcgttt ttatctgcag
     6121 gcgggaaata gagcggacct ttcagaccgc agcccgtcag gctgaagaga gtaagtaata
     6181 cagtgagtgc cttaaacacg tttttcatta tggattgcct gtaaagttca tcgctttctg
     6241 ctttctatca tcgcaggaga aggcgtaaaa gcaagcgttt agcgactctt tatgaagtct
     6301 gaaaagtgag gaaatgctgc gagtataacg cttactcgtg aggatttatg ttctgctggc
     6361 agtttcgtga tcggcacctc gcgccaggat ggctttatgc actatcgcaa tgtggtttgt
     6421 ttgttgtctt gttcattgtt tttatcgtcg gcatggggat gtcggctttc cgcacctgaa
     6481 cataatattt accagaaaca gggaaaaggc gtggtgtacc tgcgccctta taaagaaaca
     6541 aatctttctc tacctgacgt gaattacaag agtttgcgtc ggttacccaa tttattaata
     6601 gacccg
//
LOCUS       DAJVTL010000189         6521 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.191, whole genome shotgun sequence.
ACCESSION   DAJVTL010000189 DAJVTL010000000
VERSION     DAJVTL010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6521
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.191"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..485)
                     /locus_tag="OQQ26_004018"
     CDS             complement(<1..485)
                     /locus_tag="OQQ26_004018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859293.1"
                     /translation="MAISSRAGRKKKRIRTLYEVLTDAVNYYVNHGWDSEKSLLEWCR
                     KLRVAAQRETPDDTVARKHLTAIYSRLVIDGGALRDQPPDGPKKITVEKLKPEFRKEL
                     DRRIFASANLIKLNREQAIEKTIQRFQGWVTSIPPDGVSKIDRREVKSGFQKSVKDMD
                     F"
     gene            complement(430..1866)
                     /locus_tag="OQQ26_004019"
     CDS             complement(430..1866)
                     /locus_tag="OQQ26_004019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HCS1859294.1"
                     /translation="MAEIEITGGLGSALMRILEAEEIQPGTDIGYELCKLLWQFHPLG
                     GKLVEKPILMAMCKPRQYNVETDPDERVVRRFQEVWERMRVNEKIKNLFFLSRCYGAA
                     AIGVGTDSVSCREPLPTFGLTEEDVYINAWDPLNASGSMVTDQNPNSPFFQEANKRLK
                     IGGKDWHPSRTLKIFNGTPIYLEFQSSSFGFTGRSVFQRVLYSLKSYINTMEANDLVS
                     QKAGVLVAKVVQSGSKMDGIMAAATGRKRENVKAAKNKGVLSIGKDEDVSSLNLQNID
                     GALNTARDNIIADIAAGSDVPAIIIKEEAFSNGFGEGKEDSKAISQYIDGVRQQIEPV
                     MDYFERLVQYIAWNEEFYQSLKNDYPDIITEDYKTTFYQWRREFTATWQELVEESPDK
                     RRESDSKVIQQAIALFSAVSPQVDPENRAAVTEWLASLVNATQTYGEAPLIIDVDAMA
                     NYEPPKQETPDGNFQPGGEEEETDQDAV"
     gene            complement(1884..3212)
                     /locus_tag="OQQ26_004020"
     CDS             complement(1884..3212)
                     /locus_tag="OQQ26_004020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001471377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HCS1859295.1"
                     /translation="MSIEIYLPKPHEGQIAAWTAAIEERFHAVCCGRRWGKTVMLVNI
                     ATSFATRKFAVPTTGQLIAGRVGIFTAQYRQYQEIWDEISAVLQPLILSQSKNEKRII
                     LRNGGRIDFWVTDNNKLAGCGRKYHAVLIDEAAFTKSPEMLEEIWPRAIRPTLVDYRG
                     CAWVFSTPNGIDESNFFYAICHDESLGFVMHHAPTSSNPYIPKEELEETEKKSDPRVW
                     QQEYLAEFVDWSKDALLDVDKLLVDGQPIEMPPYCDMIFAVMDTALKGGTENDGTGVL
                     YFAYESTYSEEPKLTIIDRDVTQIKASLLPEYIPGVYDNLERLAKLCRPRLGSQGIFM
                     EDAAMGAILNQKAETEGWDMTPIKSALTSKGKDERAVMASSYHYQGMCKIVREAYDKT
                     VSFKRTTANHLIKQIAGFHLADKDAHKRADDLFDCYTYGLIIAHGNYAEL"
     gene            complement(3202..4293)
                     /locus_tag="OQQ26_004021"
     CDS             complement(3202..4293)
                     /locus_tag="OQQ26_004021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000089440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HCS1859296.1"
                     /translation="MSRPDWGALQQEYIAEYTRSGISPVAWCEARGLNYATARRYIKK
                     PPKNAQTEMRKTAQQSAQKKSAQTAQKRNGKSQKKKPVSDACLNEGDAEEFSFCPDEF
                     GISDQQAKFAMLVAQGKKPTEAYRLAGYEGQGATANSNASRMLRNARVYRAISYFRNQ
                     YQKRYTADLDLLVSQLMAIVQADPNQLAQFRRVNCRYCWGENHLYQWRDIAEFDKAAA
                     QASRDGKPEPEYGGLGFVDNAIPNPDCPKCCGEGTGQLYMADTTLLDGDARQLYAGAK
                     LGKFGVEILLEDKAAARRELIKLIMATKGSSAGGATDSRNDLELEGLRLRNEKLRTEI
                     ENLKKGVGGENNEIIIHNSLPMPGVDNVD"
     gene            complement(4576..6033)
                     /gene="trkG"
                     /locus_tag="OQQ26_004022"
     CDS             complement(4576..6033)
                     /gene="trkG"
                     /locus_tag="OQQ26_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkG"
                     /protein_id="HCS1859297.1"
                     /translation="MNTSHVRVVTHMCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFI
                     TFVIFFCIGGGAWYTTKKSGIQLRTRDGFIIIVMFWILFSVISAFPLWIDSELNLTFI
                     DALFEGVSGITTTGATVIDDVSSLPRAYLYYRSQLNFIGGLGVIVLAVAVLPLLGIGG
                     AKLYQSEMPGPFKDDKLTPRLADTSRTLWITYSLLGIACIVCYRLAGMPLFDAICHGI
                     STVSLGGFSTHSESIGYFNNYLVELVAGSFSLLSAFNFTLWYIVISRKTIKPLIRDIE
                     LRFFLLIALGVIIVTSFQVWHIGMYDLPGSFIHSFFLASSMLTDNGLATQDYANWPTH
                     TIVFLLLSSFFGGCVGSTCGGIKSLRFLILFKQSKHEINQLSHPRALLSVNVGGKIVT
                     DRVMRSVWSFFFLYTLFTVFFILVLNGMGYDFLTSFATVAACINNMGLGFGATASSFG
                     VLNDIAKYLMCIAMILGRLEIYPVIILFSGFFWRS"
     gene            complement(6171..>6521)
                     /locus_tag="OQQ26_004023"
     CDS             complement(6171..>6521)
                     /locus_tag="OQQ26_004023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001082741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HCS1859298.1"
                     /translation="NVKEKLNQATAIITDMQIRQRDVAALDAKYLKELADAKAENDAL
                     RDDVAAGRRRLHIKAVCPSVREATIASSVDNAVSPRLADTAERDYFTLRERLVMMQAQ
                     LEGAQQYITEQCLK"
BASE COUNT         1697 a         1703 c         1386 g         1735 t
ORIGIN      
        1 ataaaatcca tatccttcac ggacttctga aaaccggact tcacttcccg gcgatcaatt
       61 ttgctcaccc cgtcaggcgg aatggacgta acccatccct gaaaacgctg tatggttttc
      121 tcgatagcct gttctcggtt gagttttatc aggttggcac tggcgaaaat tcgcctgtcg
      181 agttccttgc gaaattcagg tttcagtttt tcaacagtga tttttttagg gccgtcagga
      241 ggctgatccc gtaatgcccc gccgtcgatg acaagacggc tgtagatagc ggtgagatgt
      301 tttctggcta cggtatcatc aggggtttct cgctgagcgg ctacacggag tttccggcac
      361 cattcgagca atgatttttc gctatcccac ccgtgattta cgtagtagtt aacggcatcc
      421 gtcagaacct catacagcgt cctgatccgt ttcttcttcc tccccgcccg gctggaaatt
      481 gccatcaggc gtctcctgct tcggtggttc ataattcgcc atcgcgtcca catcaatgat
      541 gagtggagct tcgccatagg tctgcgtggc attaacaagg cttgccagcc attcagtgac
      601 ggcggcacgg ttttcaggat caacctgtgg cgacacggca gagaaaagtg ctatcgcctg
      661 ttgaatcact ttactgtcgc tttcccggcg tttgtccggc gactcctcca ccagctcctg
      721 ccacgtcgcg gtaaactcgc gccgccactg gtaaaacgtg gttttatagt cctcggttat
      781 gatgtccggg taatcatttt tcagcgactg ataaaattcc tcgttccagg cgatgtactg
      841 caccaggcgt tcgaaataat ccatcacagg ttcaatctgc tggcgtacac catcgatata
      901 ctggctgatg gctttcgagt cctccttacc ttcaccgaat ccgttactga atgcttcttc
      961 cttgataata atggccggaa cgtcactccc ggcggcaata tcagcaatga tattgtcgcg
     1021 ggcagtattc agcgccccgt cgatgttttg caggttcagt gaacttacgt cttcgtcttt
     1081 tccaatactc aacacgcctt tatttttggc ggctttcacg ttttcccttt tacgccccgt
     1141 ggcagcagcc atgatcccgt ccattttcga accggactgc acaactttag ctaccagtac
     1201 gcccgccttc tgactgacga gatcattcgc ctccatcgtg ttgatatagg atttcaggga
     1261 ataaagaacg cgctgaaaca cacttcgtcc ggtgaatccg aacgatgaac tctgaaactc
     1321 cagataaatc ggtgtgccgt tgaagatttt cagtgtgcgt gacggatgcc agtcttttcc
     1381 gccaatcttc agccttttgt tggcttcctg gaaaaacgga ctgtttgggt tctggtcagt
     1441 caccatcgaa ccggaagcgt tcaacggatc ccacgcgttg atatacacat cctcttctgt
     1501 cagcccgaat gtcggaagcg gctcacgaca tgaaacactg tcggtgccca cgccgatcgc
     1561 tgcagcaccg tagcaacgag acagaaaaaa cagatttttt atcttctcgt tgaccctcat
     1621 acgttcccat acctcctgga aacgccgcac aaccctctcg tcaggatctg tctccacgtt
     1681 atactgtcgc ggcttacaca tcgccatcag tatgggtttt tcgacaagtt ttccgcccag
     1741 aggatggaat tgccacagca gcttacacaa ttcatagcca atatcggttc ctggctgaat
     1801 ttcttcagcc tcaagaatac gcatcagtgc tgaaccgagg ccgccagtaa tctcgatctc
     1861 tgccatcaaa aatatcctga tttttacaac tccgcgtaat taccgtgcgc gatgatcaat
     1921 ccataggtgt aacaatcgaa aaggtcatca gcacgtttat gcgcgtcttt atccgccagg
     1981 tggaatccgg cgatttgttt tatgaggtgg tttgcggtgg tgcgcttgaa tgaaacggtc
     2041 ttgtcgtaag cctcccggac gattttgcac atcccctgat agtggtagct ggatgccatc
     2101 accgcccgtt cgtctttgcc cttgctggtt agtgccgatt taatcggcgt catatcccag
     2161 ccttcggttt ccgccttctg gttgaggatt gcccccatcg cggcgtcttc cataaaaatt
     2221 ccctggctgc ccagacgcgg acggcataat ttcgcgaggc gctcaaggtt gtcataaacg
     2281 ccggggatat attcaggaag caatgacgct ttaatttgcg tcacatccct gtcaataatc
     2341 gtcagttttg gctcttccga atacgttgac tcataagcga aatacaacac gccagtacca
     2401 tcattttcgg tcccgccttt cagcgccgta tccatcactg cgaaaatcat gtcgcagtac
     2461 ggcggcatct caatcggctg accgtccacc agcagcttat cgacatcgag taacgcgtct
     2521 ttggaccagt ccacgaactc ggcaagatat tcctgctgcc agacgcgcgg atcggatttc
     2581 ttctccgttt cctccagttc ttctttcgga atatacggat tcgatgaagt tggcgcatgg
     2641 tgcatgacaa atcccaggga ttcatcgtgg catatcgcgt agaaaaaatt gctctcgtcg
     2701 ataccgtttg gtgtggaaaa tacccacgca cagccgcggt aatcgacaag cgtcgggcgt
     2761 atagctcggg gccagatttc ctcgagcatt tccggcgatt tagtgaatgc tgcctcatca
     2821 atcagcacag cgtgatattt acgcccacac ccggccagtt tgttattgtc cgttacccaa
     2881 aagtcgatgc gccccccatt acggagaata atgcgctttt cattttttga ctggctgagg
     2941 atcagcggtt gcagaacggc gctaatttca tcccagattt cctggtactg gcggtattgt
     3001 gcggtaaaaa tccccaccct acccgcgata agttgcccgg tggtaggaac ggcaaatttc
     3061 cgcgtagcga aactggtagc gatgtttacc agcatcaccg ttttacccca gcgacgacca
     3121 cagcataccg cgtggaagcg ttcctctatt gccgccgtcc atgcagctat ttgcccctca
     3181 tgaggttttg ggaggtagat ttcaatcgac attatccact cccggcatcg gcagagagtt
     3241 gtggataatt atttcgttat tctcaccacc cacgcctttt ttgaggtttt caatctcagt
     3301 gcgcagcttt tcgttgcgaa gcctcagtcc ttcaagctcc agatcattgc gactgtcagt
     3361 tgcaccacca gcagaacttc ctttcgtcgc cattatcagc ttgataagtt cgcgccgggc
     3421 ggcagcctta tcctccagca ggatctcaac accaaatttc ccgagctttg cccctgcata
     3481 taattgtcgc gcatccccat caagcagagt ggtatcagcc atataaagct gtcccgttcc
     3541 ctcaccgcag cacttcggac aatccggatt gggtatggcg ttatcaacaa agccgaggcc
     3601 tccatattcc ggctcgggtt tgccatctct ggaggcctgt gccgctgcct tatcgaattc
     3661 tgcaatatca cgccactggt agagatgatt ctcgccccag caataacggc agttaacacg
     3721 gcgaaattgt gccaactgat tggggtcggc ctggacaata gccatcaact gactcaccag
     3781 taaatccagg tctgcggtat agcgtttctg atactgattg cggaagtaac tgatagcacg
     3841 ataaaccctg gcatttctaa gcatacggct ggcgttgctg ttagctgtcg caccttgccc
     3901 ctcataacca gccagtcggt atgcctctgt cggctttttc ccctgagcaa caagcatcgc
     3961 aaacttagcc tgctggtcag aaatgccgaa ttcatcgggg cagaacgaaa attcctccgc
     4021 gtcgccctca ttcaggcacg catcggatac tggctttttt ttctgagatt ttccgttccg
     4081 cttttgcgca gtctgcgcag attttttctg cgcactttgt tgcgcagttt tacgcatttc
     4141 tgtctgcgca tttttcggag gttttttgat gtaacgacgg gctgttgcgt aattcagtcc
     4201 ccttgcttca caccatgcca ccggagatat accggagcgg gtgtattcag caatatactc
     4261 ctgctgcaac gccccccagt ccggtctgct catcagttag tcctgatttt tatccaccct
     4321 gagtagttcg cgcagagcaa aggcatcccc ttttctggca agcttaaaca ataccgctcg
     4381 taacttggct tcacctttcg ctccgccctt acggatggac gcataaaatc tcgctcatac
     4441 agccttgctt tatgaataaa acgcccccca gcagccagtg ctactggggg cggaggtgtt
     4501 gctggtaaag ttaggtattg gatcaatgag tgagtcaaca taatattaaa ctcacaatta
     4561 taaatcagcc atatattagg agcgccaaaa aaaacctgaa aacaatataa taacaggata
     4621 aatttcaagg cgaccaagaa tcatagctat gcacattaaa tattttgcaa tgtcattaag
     4681 cactccgaat gacgatgcag tagccccaaa acctaatccc atattattaa tacatgcagc
     4741 cactgttgca aatgatgtaa gaaaatcata tcccatacca tttaacacca gtataaaaaa
     4801 caccgtgaag agagtataaa gaaaaaagaa actccataca gacctcatga cacgatctgt
     4861 aactatcttc cctcctacat ttacactcaa caacgctctg ggatgagaaa gctggtttat
     4921 ctcgtgtttg ctttgtttga aaagtataag aaatcgaagt gacttaatgc caccacaagt
     4981 tgaacctaca catcccccaa agaaacttga caacagcaaa aacactatcg tgtgcgtggg
     5041 ccagtttgca taatcctgcg tagctaaacc attatcagtg agcatggagc tggcaagaaa
     5101 aaacgaatga ataaaacttc caggcaagtc atacatacct atatgccaga cctggaaaga
     5161 ggtaacaatg atcaccccta aggctattaa cagaaagaaa cgaagttcaa tatctctgat
     5221 taaaggtttt atcgttttcc tgctaataac aatataccaa agggtgaaat tgaaagccga
     5281 tagcagggaa aaagaaccag ccaccagctc aaccaaatag ttattaaaat atccgatact
     5341 ctcgctatga gttgagaaac caccaagcga aactgtggat atcccgtgac aaatagcatc
     5401 aaacaaaggc attcctgcaa gtctataaca gacaatacaa gcaataccta ataaagaata
     5461 agttatccaa agtgtccgtg acgtatcggc caggcgggga gtaagtttgt catccttaaa
     5521 tggccccggc atttctgact gataaagctt tgcaccacca atacccaata atggcaatac
     5581 agcaaccgcc agaacaataa ctcctaaacc acctataaaa tttaactgtg accgatagta
     5641 caaatatgcc cgaggtaatg aactaacatc atcaattaca gttgctcctg ttgttgttat
     5701 tccagaaacc ccttcaaata gagcatcgat aaacgttaaa ttaagttctg agtcaatcca
     5761 taaagggaat gcactaataa cagaaaacaa aatccaaaac attacaatta taataaaccc
     5821 atcacgggta cgtaattgaa taccagattt cttagttgta taccacgctc cgccaccaat
     5881 gcaaaaaaat ataacgaaag ttataaagaa aacgaacagg cttttttctt tataaaacaa
     5941 tgctacaacc attggtggca acattgaaag actatagagc caaaccagaa acccacacat
     6001 atgagtaaca actcttacat gagatgtatt catatataaa tattctttca attataacca
     6061 ccttgctgca atattatgat tatactgtat aaaatttaac tcctctaaga tcttacttca
     6121 ctgttcctta tgaaacaatc atcaaaatga atcatattgt agttaagatt ttactttaaa
     6181 cactgttcgg ttatgtattg ctgagcacct tcaagttggg cctgcatcat taccagtcgt
     6241 tcccggaggg tgaaataatc ccgttcagcg gtgtctgcca gtctggggga gactgcatta
     6301 tccacgctgg aggcgatggt ggcttcacgc acggacggac agactgcttt gatgtgcaac
     6361 cgacgacgac cagcggcaac atcatcacgt agagcatcat tttcagcttt tgcatcagct
     6421 aactccttca ggtattttgc atcgagtgca gcaacatcac gctggcgtat ctgcatgtca
     6481 gtaatgattg cggtcgcctg gttgagtttt tccttcacat t
//
LOCUS       DAJVTL010000190         6357 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.192, whole genome shotgun sequence.
ACCESSION   DAJVTL010000190 DAJVTL010000000
VERSION     DAJVTL010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6357
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.192"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(79..166)
                     /locus_tag="OQQ26_004024"
     tRNA            complement(79..166)
                     /locus_tag="OQQ26_004024"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(130..132),aa:Ser,seq:gga)
     gene            400..1338
                     /gene="ghrA"
                     /locus_tag="OQQ26_004025"
     CDS             400..1338
                     /gene="ghrA"
                     /locus_tag="OQQ26_004025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415551.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HCS1859299.1"
                     /translation="MDIIFYHPTFDTQWWIEALRKALPQARVRAWKSGDNDSADYALV
                     WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY
                     AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRF
                     PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD
                     GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV
                     AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY"
     gene            1393..2130
                     /gene="ycdX"
                     /locus_tag="OQQ26_004026"
     CDS             1393..2130
                     /gene="ycdX"
                     /locus_tag="OQQ26_004026"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding phosphatase"
                     /protein_id="HCS1859300.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER
                     ILNVSPRRLLNFLESRGMAPIAEFADL"
     gene            2154..2708
                     /gene="ycdY"
                     /locus_tag="OQQ26_004027"
     CDS             2154..2708
                     /gene="ycdY"
                     /locus_tag="OQQ26_004027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone YcdY"
                     /protein_id="HCS1859301.1"
                     /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DELLTRLQKSCDMAQVSADYNALFIGDECVVPPYRSAWVEDATEAEVRAFLSERGMPL
                     ADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
                     RTMAPLTRDAISAMWDELEEDSEE"
     gene            2810..3301
                     /locus_tag="OQQ26_004028"
     CDS             2810..3301
                     /locus_tag="OQQ26_004028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HCS1859302.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIK
                     NKA"
     gene            complement(3365..4198)
                     /gene="csgG"
                     /locus_tag="OQQ26_004029"
     CDS             complement(3365..4198)
                     /gene="csgG"
                     /locus_tag="OQQ26_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
                     /protein_id="HCS1859303.1"
                     /translation="MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPA
                     PTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQ
                     NLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG
                     IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGE
                     VGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPE
                     S"
     gene            complement(4225..4641)
                     /gene="csgF"
                     /locus_tag="OQQ26_004030"
     CDS             complement(4225..4641)
                     /gene="csgF"
                     /locus_tag="OQQ26_004030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgF"
                     /protein_id="HCS1859304.1"
                     /translation="MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNS
                     AQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIV
                     DIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF"
     gene            complement(4666..5055)
                     /gene="csgE"
                     /locus_tag="OQQ26_004031"
     CDS             complement(4666..5055)
                     /gene="csgE"
                     /locus_tag="OQQ26_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgE"
                     /protein_id="HCS1859305.1"
                     /translation="MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFY
                     RAFNDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFAL
                     IQTEEALNRRQINQALLSTGDLAHDEF"
     gene            complement(5060..5710)
                     /gene="csgD"
                     /locus_tag="OQQ26_004032"
     CDS             complement(5060..5710)
                     /gene="csgD"
                     /locus_tag="OQQ26_004032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CsgD"
                     /protein_id="HCS1859306.1"
                     /translation="MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQ
                     RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWP
                     HINGVFYAMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE
                     KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR"
BASE COUNT         1645 a         1419 c         1537 g         1756 t
ORIGIN      
        1 tcggggcttc tcatcccccc ggtgtgtgca atatacgaaa aaaaagcccg tactttcgta
       61 cgagctcttc tttaaatatg gcggtgaggg ggggattcga acccccgata cgttgccgta
      121 tacacacttt ccaggcgtgc tccttcagcc actcggacac ctcaccaaat tgtcgttcct
      181 gtcttgctgt aacgggcgct aatttaggga aatcatgacc tgaggtcaac aaactttttt
      241 aaaaaatcgc gcgtttattc aaacttcaat caatatgcag ttttaataag cgaaatctgc
      301 tttttttgcc accgaccacg gatttgttat gctggtggct tttgtagatc ataacgataa
      361 gtgcgaataa atttcgcaca acgcttttcg ggagtcagta tggatatcat cttttatcac
      421 ccaacgttcg atacccaatg gtggattgag gcactgcgca aagctcttcc tcaggcaaga
      481 gtcagagcat ggaaaagcgg agataatgac tctgctgatt atgctttagt ctggcatcct
      541 cctgttgaaa tgctggcagg gcgcgatctt aaagcggtgt tcgcactcgg ggccggtgtt
      601 gattctattt tgagcaagct acaggcacac cctgaaatgc tgaacccttc tgttccactt
      661 tttcgcctgg aagataccgg tatgggcgag caaatgcagg aatatgctgt cagtcaggtg
      721 ctgcattggt ttcgacgttt tgacgattat cgcatccagc aaaatagttc gcattggcaa
      781 ccgctgcctg aatatcatcg ggaagatttt accatcggca ttttgggcgc aggcgtactg
      841 ggcagtaaag ttgctcagag tctgcaaacc tggcgctttc cgctgcgttg ctggagtcga
      901 acccgtaaat cgtggcctgg cgtgcaaagc tttgccggac gggaagaact gtctgcattt
      961 ctgagccaat gtcgggtatt gattaatttg ttaccgaata cccctgaaac cgtcggcatt
     1021 attaatcaac aattactcga aaaattaccg gatggcgcgt atctcctcaa cctggcgcgt
     1081 ggtgttcatg ttgtggaaga tgacctgctc gcggcgctgg atagcgggaa agttaaaggc
     1141 gcaatgctgg atgtttttaa tcgtgaaccc ttaccgccgg aaagtccgct ctggcaacat
     1201 ccacgcgtga cgataacacc acatgtcgcc gcgattaccc gtcccgctga agctgtggag
     1261 tacatttctc gcaccattgc ccagctcgaa aaaggggaga gggtctgcgg gcaagtcgac
     1321 cgcgcacgcg gctactaata aagcatcagg attcctgcta tccttggcgg gaattgaata
     1381 caggagagag ttatgtatcc cgtcgacctt catatgcata ccgttgccag cacgcatgca
     1441 tatagcacat tgagtgatta cattgcccag gccaaacaaa agggcattaa actttttgcg
     1501 atcaccgatc atggcccgga tatggaagat gcgccgcatc actggcactt cattaacatg
     1561 cgtatctggc cgcgagtggt tgatggagta gggatcctgc gcggcatcga agctaacatt
     1621 aaaaatgttg atggtgaaat tgattgcagc ggcaaaatgt ttgattcgct ggatctgatt
     1681 attgccggtt ttcatgagcc ggtttttgcg ccgcatgata aagcgaccaa tacacaagcg
     1741 atgatcgcca ctatcgccag cggcaatgtg catataataa gccatcccgg aaatcccaaa
     1801 tatgaaatag atgttaaagc cgttgctgaa gcagccgcga aacatcaggt ggcgctggaa
     1861 atcaataatt cctctttttt acactcacgt aagggaagtg aagacaattg tcgtgcggta
     1921 gccgcagcgg tacgtgacgc tggaggttgg gtggcattag gctcggattc tcacaccgcg
     1981 tttaccatgg gggaatttga agagtgtctt aaaatcctcg acgcggtaga ttttccgcca
     2041 gagcgcattt tgaatgtttc tccgcgccgc ttactgaact tccttgaatc tcgcggtatg
     2101 gcaccgattg cggaatttgc agacctttaa ttactagtaa tggaaatata ttaatgaacg
     2161 agttttctat cctctgtcgt gtgctgggtt cgctctatta ccgccaacca caagatcctt
     2221 tactggtgcc gctgtttacc ctgattcgtg aggggaaact ggctgcgaac tggccactgg
     2281 agcaggatga gttgctgaca cgtttacaga aaagctgtga tatggcgcaa gtctctgccg
     2341 attacaatgc gttgtttatc ggcgatgaat gtgtcgtgcc gccatatcgt agcgcatggg
     2401 ttgaggacgc aacggaagcg gaagtgcgcg cttttctttc cgaacgaggg atgccactgg
     2461 cggatacgcc agccgatcac atcggcacat tgctgcttgc ggcttcctgg ctggaagatc
     2521 agtcaacgga agatgagagc gaagcactgg aaacactgtt cagtgagtat ctgttaccct
     2581 ggtgtggtgc gttcctcggc aaagtggagg cccatgcaac cacgcctttc tggcgcacca
     2641 tggcaccgct aacccgtgat gccattagtg caatgtggga cgagctggaa gaagattctg
     2701 aagagtaaat gtgatcatcg tcactcataa ctgcaacaga taatttgttg ttgcataaaa
     2761 tgtgtactcg atctcattca tggccgcgtt ttctgctatc atgcgcggca tgaacatact
     2821 tctctctatt gcaatcacaa caggcattct ctccggtatc tggggatggg tggctgtttc
     2881 cctgggctta ctaagctggg cgggcttcct gggctgtacg gcctactttg cttgcccgca
     2941 aggtgggctg aaagggctgg cgatctccgc tgcaaccctg cttagtggcg tggtgtgggc
     3001 gatggtcatt atttacggta gtgcactggc accacatctg gaaattctcg gttatgtcat
     3061 aaccggtatt gtcgcgtttc tgatgtgtat tcaggccaaa cagctgctgc tttcatttgt
     3121 tccggggacg tttataggcg catgcgcgac gtttgccggg cagggtgact ggaaactggt
     3181 gttaccttcg ctggcgcttg ggctgatatt tggttacgca atgaaaaaca gcggcttgtg
     3241 gctggcggcg cgtagtgcaa agacggctca ccgtgagcag gaaatcaaaa ataaagcgtg
     3301 aggggcactc acgctttcgc ttaaacagta aaatgccgga tgataattcc ggcattttta
     3361 tctgtcagga ttctggtgga accgacatat ggcggtattt aaccagaatg tcattttgcc
     3421 gttctgcttt gttctgcaaa tcccacagac cacggtcgat accatcatta atcaggaaaa
     3481 tgacccctgt ttcgatagcc gacatcaggc acagcataac gggttcgttt gaggtgtaac
     3541 ccacttcccc ttccagcaag cgctggtagt caataaagcg gaaaaccccg gcttgaactt
     3601 cataggaaag tatcgtctta ctggtgttca ccgaggagag gatctcaccg gtactcacat
     3661 tgacgacacg caggttcacg gcaatctgat cgagctggta ttgcgtgtct gcaccgatcc
     3721 caaaatatct tgccccaaca ccgcccgatt taacgttgct ttcataaccg ataatcgaac
     3781 cttcaaccat gatatttgcc gccgttaaag attgcagcgg gattcggtta ttaatggcaa
     3841 ccgtgccgtt ttcttgtgcc gcacgaataa tcttgcgctc gttaagcagg ttttgtaagc
     3901 cctggcgctc cagcggtata aaccagcgag aatctttcag tgccgtgacc agcattgccg
     3961 tggcgctttg cggaacagca gtggagaagt tacttgccgg gtagggttta aattgcccgg
     4021 tttcgtcctg aatgttgtat accgaaacaa agattttacc cgtcggcgct ggcagatggg
     4081 tcaaatcttt gtagctctga gcacgaggca ttaatgtcgg tctggcggct tctttaggcg
     4141 gggcggttaa gcatccgctc agtaacatga cggcaaccaa aagaaataag cgctgcatga
     4201 ttattttcct tatgaagctg gggcttaaaa atcggttgag ttattttgta aacccgaaac
     4261 ctggatggtc gaggtttgtc cggttttacg atctgtcacg ttcaactgca attgaccatc
     4321 gcggttggca atatcgacaa tataatcgtt ggtcaccatg cggcccggtt taccggtatt
     4381 aatattcgac agtagcccac ctaaaatttg tgactggatg gcctgagtaa agttatctaa
     4441 cgctgagggt gtttcaatac caaagtcatc gttatagctc ggatctttat aagagttttg
     4501 ggcctgagcg ctatttaata aaaaagcgcc attatttggg ttaccaccaa agtttggatt
     4561 acggaactgg aaagtcatgg ttccagccca acttaatggc gaaataagca tgagtagaac
     4621 tactgcatgt ttgacacgca ttgcagcctc cgaacaattt tttatttaga attcatcatg
     4681 cgccaaatcg cccgtactta ataacgcctg atttatctgg cgacgattta gtgcttcttc
     4741 agtttgaatc agtgcaaaga cgacagtttt ctcgaagtct cttttcaacg gaaataaaaa
     4801 agtctggaaa ataacgtcct gattgaccgt tatagtgatc cagcttcccc atcgtgcact
     4861 gggcctttca ttaatcgtta agttacccgt atagtcactt tcccatttat cattaaaggc
     4921 tcggtaaaaa tcatggccaa tagatgaaac agtatggtca gttagcaatc ccgggacttc
     4981 tacctcaacg gcgtgaagat tccctgcggc gaacagaaat tctgccgcca caatccagcg
     5041 taaataacgt ttcatggctt tatcgcctga ggttatcgtt tgcccaggaa accgcttgtg
     5101 tccggttttt tacggctatc ttcttgaaaa gattataaag atgcgtttta accgtatttt
     5161 cgctgatgaa caacgaacga gcgatctcgt tattagacgc gccgatacgc agcttattca
     5221 ggatctcttt ttcccgatga gtaaggaggg ctgattccgt gctgttataa cgatagttac
     5281 ctgaatgcgt aatcaggtag ctggcaagct tttgcgtaaa gtagcattcg ccgcgcagga
     5341 cgccttgcaa cccattgaca acacgttctt gatcctccat ggcataaaaa acgccgttga
     5401 tatgaggcca gttttcaatg tcgcggtacg ggtaatcttc aggcgtattt agcaacaata
     5461 ttttgatatt gttgtttttc ctgctcaaag tatcctgcca ataatggata agctttttat
     5521 ccgcttccat catatccaga agaataatag agcctgaaga gatatcgtcc agagaacgtt
     5581 gaatattatg taattttcct gtaattgcca gcgattgttt aaggtgctgc aagagagctg
     5641 tcgcctgcaa agaaggttta gtgatcaaca ataatgtatg accatgaata ctatggactt
     5701 cattaaacat gatgaaaccc cgcttttttt attgatcgca cacctgacag ctgcctctaa
     5761 aatagaagca ccagaagtac tgacagatgt tgcactgctg tgtgtagtaa taaatcagcc
     5821 ctaaatgggt aaaatataaa actaatggat tacatctgat ttcaatctag ccattacaaa
     5881 tcttagatca agtgttaaac atgtaactaa atgtaactcg ttatattaaa atgttaatct
     5941 taaggtttta ttaagtttag aaatgataga aaagttgtac atttggtttt tattgcacaa
     6001 ttttaaaaaa tcatacaaat ggtgataact tactaataat gcatataaaa aatatttcgg
     6061 tgtagtcctt ttgtcatgta aaacgttctt gttttttctc cacacctccg tggacaattt
     6121 tttactgcaa aaagacgagg tttgtcacgg cttgtgcgca agacatatcg cagcaatcag
     6181 cgacgggcaa gaagaatgac tgtctggtgc tttttgatag cggaaaacgg agatttaaaa
     6241 gaaaacaaaa tattttttgc gtagataaca gcgtatttac gtgggtttta atactttggt
     6301 atgaactaaa aaagaaaaat acaacgcgcg ggtgagttat taaaaatatt tccgcag
//
LOCUS       DAJVTL010000191         6229 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.193, whole genome shotgun sequence.
ACCESSION   DAJVTL010000191 DAJVTL010000000
VERSION     DAJVTL010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6229
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.193"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..171
                     /locus_tag="OQQ26_004033"
                     /pseudo
     CDS             1..171
                     /locus_tag="OQQ26_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            749..1876
                     /gene="ltrA"
                     /locus_tag="OQQ26_004034"
     CDS             749..1876
                     /gene="ltrA"
                     /locus_tag="OQQ26_004034"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HCS1859307.1"
                     /translation="MFDQQRDGNLYKIWNRLCSGTWFPPPVLEKRIPKSNGKERILGI
                     PTVSDRIAQGAIKLFMEEKLDPIFHADSYGYRPGKSAHDALKQCAIRCWRYSWILEVD
                     ISAFFDHVRHDLVLKALEHHGMPKWVILYCRRWMEAPMQSCENGELITRTRGTPQGGV
                     ISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRMSDATRLKNRLSERFSEV
                     GLVLNAGKTNIAYIDTFKRRNVATSFTFLGYDFKVRTLKNFKGERYRKCMPGASNAAM
                     RKITETIKKWRIHRSTAESLLDFARRCNAIVRGWIEYYGKFWSRNFNYRLWSAMQSRL
                     LKWMQSKYRLSNRKAQRKLTLVRKEYPKLFVHWYLLRASNE"
     gene            1959..2138
                     /locus_tag="OQQ26_004035"
                     /pseudo
     CDS             1959..2138
                     /locus_tag="OQQ26_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(2168..2650)
                     /locus_tag="OQQ26_004036"
                     /pseudo
     CDS             complement(2168..2650)
                     /locus_tag="OQQ26_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016154415.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(2906..3886)
                     /locus_tag="OQQ26_004037"
     CDS             complement(2906..3886)
                     /locus_tag="OQQ26_004037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HCS1859308.1"
                     /translation="MENRKHRPTIGRTLNTNILNNTEEISAPVHVFTLNTGRKAKFTE
                     IKVDHDKVDTQTFVVEEVNGREQTALTPDSLKDITRTIRLQQFYPCIGIRTGDLIEIL
                     DGSRRRAAALLCKVGLRVLVTDDELTVSEAQHLAKDLQTSLEHNIREIGLRLVRLKEA
                     GMNQKQIAEREGLSAAKVTRALQAASVPKDFVSLFPVQSELTYADYRQLAELSERLRL
                     GDISIDEVVKNISPSIELITADDNLSEDEVKNSIMRLITKEMSSLLDSGVKDKAVVTL
                     LWKFDSKDKFARKRVKGRTFSYEFGRLPLEVQDKLDRMIALVLKDNLNSL"
     gene            complement(3886..5085)
                     /locus_tag="OQQ26_004038"
     CDS             complement(3886..5085)
                     /locus_tag="OQQ26_004038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCS1859309.1"
                     /translation="MTSFEQLSKVAQRADKMLLALTKQIQEQKQEFQADVFYQVYSKS
                     AVAKLPKLTRASVDGAVGEMEAQGYQFEKRPAGTATKYALTIQNIIDIYAHRGIPKYR
                     DRYSEAYSIFIGSLKGGVSKTVSSVSVAHALRAHPHLLSEDLRILLLDLDPQSSATMF
                     LNYLHAVGLVDTTAPQAMLQNVSREELLEDFIVPSVIPGVYVMPASIDDAFIASNWDT
                     LCEEHLLGQNKHAILRENIIDKLKHDFDFILIDTGPHLDAFLKNAIAAADIMFTPVPP
                     AQVDFHSTLKYLARLPELVQVIEQDGCSCRLQANIGFMSKLANKSDHKYCHSLTKEIF
                     GGDMLDVSMPRLDGFERSGESFDTVISANPVTYVGSGEALKNARMAAEDFAKAVFDRI
                     EFIRANY"
     gene            complement(5407..5745)
                     /locus_tag="OQQ26_004039"
                     /pseudo
     CDS             complement(5407..5745)
                     /locus_tag="OQQ26_004039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(5812..>6229)
                     /gene="istB"
                     /locus_tag="OQQ26_004040"
     CDS             complement(5812..>6229)
                     /gene="istB"
                     /locus_tag="OQQ26_004040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS21-like element IS100kyp family helper ATPase
                     IstB"
                     /protein_id="HCS1859310.1"
                     /translation="MGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAP
                     RLLIIDEIGYLPFSQKEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSA
                     MLGRILHHSHVVKIKGESYRLRQKRKAGVIAEANPE"
BASE COUNT         1682 a         1435 c         1488 g         1624 t
ORIGIN      
        1 gctgaactgc tggaaccgct gtatgacatc ctgcgccagt atgtgctgat gcccggtaaa
       61 gtccatgccg atgatatccc cgttccggtc caggagccgg gcagcggtaa aacaaggact
      121 gcccggctgt gggtctacgt tcgtgatgac cgtaacgccg gttcggaaat tgcagcataa
      181 gttatccatg ctctgaggtg ggtggaggtg ggccctccgg tcagggttta caggagcact
      241 gaccaaacga cccggtgctg cttcattcta aggaatgagg tggtgagcga ctcgggaaaa
      301 ggcagagatc tactgtcacg tagggttcgg gaagctgaac gaaagtaaac tgtccgatga
      361 agcatcgaaa tcttagatga tgccaaaatg gggccgtaca gccgtcccct gataagcgca
      421 gaagacacct gcttactgac tgcgcggcat ccggtgtgaa ggcagcagga tcccgggcca
      481 gaccatctca gggaacgtga gaacctgttt ccggcacgta tcgggaaaca ggggcggacc
      541 cattcgtagt agtgatgaaa gatctgtaat gggtctggag cgaagggatg gggatcacat
      601 tcattgcaga agacacaacc caaaagggga tgacgtaact gatgcaacga aaatcatttg
      661 aaataccaaa agcactggtc tgggcatcat atctggatgt gcgtcgcaac aagggagccc
      721 cctcggatgc gacgggcaga ctttgaaaat gttcgaccag caacgtgatg gcaatctata
      781 caagatctgg aaccggctat gttcgggaac atggtttccg ccaccagtgc tggaaaaacg
      841 gatcccgaag tcgaatggca aggaacgcat tctggggatc ccaacagtat ccgatcgaat
      901 tgctcaggga gcgataaaac ttttcatgga agaaaagctt gacccgattt tccatgctga
      961 ttcatatggt taccgaccag gcaaatcagc tcatgacgct ctgaaacaat gtgccatccg
     1021 gtgctggcgt tatagctgga tactggaagt ggacatcagt gcgtttttcg accatgtgag
     1081 acatgatctg gtgctcaaag ctctggaaca ccacgggatg cctaaatggg tcatcctgta
     1141 ctgtcgacgc tggatggaag cgccaatgca gagttgtgaa aatggagaat taataacccg
     1201 aacacgaggc actccgcagg gcggggtcat tagtccgcta cttgctaact tgttccttca
     1261 ctatgcattt gatttgtgga tggaaagaga atatcggggg gtaccgtttg agaggtacgc
     1321 tgacgatatt gtagtacatt gttcacgaat gagtgatgca acaaggctaa agaacaggtt
     1381 atcggagcgc ttctcggaag tcgggctggt cctgaatgca gggaaaacga atatcgccta
     1441 cattgacacg tttaaaagga gaaacgtcgc aacgagtttc acctttctcg gatatgactt
     1501 caaagtgcgt acgctgaaga atttcaaagg cgaacggtac cgaaaatgca tgccgggtgc
     1561 gtcaaatgca gcaatgcgca aaataacaga aacaatcaag aagtggcgta tacatcgctc
     1621 aacagctgag agtttgctgg attttgcgag gcgctgcaat gcgatagtga gaggctggat
     1681 cgagtactac ggaaagttct ggtccagaaa tttcaactat cgactgtgga gtgcaatgca
     1741 gtcacgtctg ctcaagtgga tgcagtctaa atacagactt tcgaaccgga aggctcagcg
     1801 aaagctgacg ctggtaagga aggagtatcc gaagctattt gttcactggt atttactacg
     1861 tgcatcaaat gagtgatcaa gagccgtatg acgcgagagt gtcacgtacg gttccgtgag
     1921 cagccgggga gtgaaattct ctccggctga ctcgactcgc gggttccgac agcgatgacg
     1981 aacatgcggc ggtgttgtac tcgctgatcg gcacatgccg tctgaacaat gtggaaccag
     2041 aaaaatggct gcgttacgtc attgagcata tccaggactg gccggcaaac cgggtacgtg
     2101 atctgttgcc ctggaaagtt gatctgagct ctcagtaaat atcaatacgg ttctgacgag
     2161 ccgcttactt ttggcgtaat tctgctgcgc ctttactgaa cacaatgccg tattcagcaa
     2221 gaagtccacg aatgtgattt atcagttgtg tcctttccat tgaaaccaac cgacgcatat
     2281 tcaaaaaagt ctggacgtcc tgttgctcca gagtttttat tggtacgggt cgtatagttc
     2341 catgttggca ggcctcagct attgcctgtg cgtcgttata atcatttttc tggcaccgct
     2401 gataagcttt aacatgttgt gccggaagca atattacatc atggtcgagt ttcctgattt
     2461 cccgggccca gtaatgagat gccccgccag cctccatcgc aacagtcatt ttaggctgtt
     2521 gcaccagcca gttaagcagt tgattgcgag aaagtttggt ctttcctgcg ggtttgccat
     2581 gagcattgat actgaaaaga taaaagttcg ttttagccag atcaatgccg gtgattttct
     2641 gttcagacat ggtatcccgc ttacttttgt ggttaaagtt tatccatcat ggcgcaattg
     2701 aaggctgccg tgaaagaggg ggaagactat ctcatcggtt actgttaaac ggctaagaga
     2761 aactatcttt ttcaagcaaa gaagatacgg tgaaacaggc gatttcaccg tgaaatactg
     2821 ttcaaaaaaa acgctgataa aagcaaaatt tcttttaaaa cagccaatta aaaactggtg
     2881 agttgctggc gaaaaacttg aattttcaca gcgaattcag attatctttt agtacaagag
     2941 caatcatacg atctaactta tcctgaactt ccaacggtaa tctgccgaat tcatatgaga
     3001 acgtacgtcc ctttactcgt tttcgagcaa atttatcttt actatcaaat ttccataaca
     3061 aagttacaac cgctttatcc tttactcctg aatcaagcaa tgaagacatt tccttggtta
     3121 taagccgcat aatactgttt ttaacctcgt cttcagaaag attgtcatca gcagtaataa
     3181 gctcaatact cggcgagata ttcttcacaa cttcatcaat agatatatca cccagcctca
     3241 gtcgttcact taattcagcc agttgcctgt aatcggcgta tgtcagctca gactgaacag
     3301 gaaaaagaga cacaaaatct ttaggtacgg acgctgcttg gagggcacga gtcaccttag
     3361 ctgccgacaa tccctctctt tccgcaattt gcttctggtt cataccggcc tctttgagac
     3421 gtactaaacg caacccaatt tcacgaatat tatgttcaag tgacgtctgc aaatctttcg
     3481 ccagatgctg agcttcagaa acagtaagct catcatccgt tacaagtaca cgtaatccaa
     3541 ccttgcatag caaagctgct gcccgacgac gggaaccatc caaaatctca ataagatcgc
     3601 cagtccgaat cccaatacat ggatagaatt gttgtaaacg tatagttctg gtgatgtctt
     3661 ttagtgagtc cggcgtcagg gctgtctgtt cgcggccatt cacctcttca accacaaaag
     3721 tttgagtgtc cactttgtca tgatcaacct tgatctcagt aaattttgcc tttcggccag
     3781 tattgagggt aaatacatga actggagccg atatttcttc agtattattc aggatatttg
     3841 tattcagcgt acggccaata gtcggtcggt gctttctgtt ttccatcagt agttggccct
     3901 tataaattca atacgatcaa aaactgcttt agcgaaatct tctgctgcca tacgtgcatt
     3961 tttcaaagct tcaccactgc caacataagt aacaggattc gcagatatca cggtatcaaa
     4021 cgactcgccg cttctctcaa aaccatcaag acgtggcatt gaaacatcaa gcatgtcacc
     4081 accgaaaatc tcttttgtca ggctatggca gtatttatga tctgacttat tcgccagttt
     4141 cgacatgaag ccaatatttg cctgcaaacg gcatgaacat ccatcctgtt caataacctg
     4201 tacaagttca ggtaaacgag ccaaatattt aagcgtggaa tggaaatcaa cttgtgctgg
     4261 cggcaccggt gtaaacatga tatctgcggc agcaatggca tttttcaaaa atgcgtccag
     4321 atgcgggcct gtatcaataa ggatgaagtc gaaatcatgc ttcagcttat caataatatt
     4381 ctcacgcaat atcgcgtgtt tgttttgtcc taatagatgc tcctcgcaca gagtatccca
     4441 gtttgatgca ataaaggcgt cgtcaataga agccggcata acataaacgc cagggataac
     4501 tgacggaacg ataaaatctt ccagtaattc ctcacgactc acgttctgca acatagcctg
     4561 cggtgcggtt gtatcaacca gccccaccgc atgcaagtag ttcagaaaca tagtggctga
     4621 tgactgggga tctaaatcaa ggagcagaat acgtaaatct tctgacagca ggtgaggatg
     4681 agcacgcagg gcgtgagcta cggaaacact actcacggtt ttagacacac cgccttttag
     4741 actaccgatg aatatggaat atgcctcact ataacgatcg cgatatttag gaatgccacg
     4801 atgtgcatag atatcgataa tgttctggat ggttaatgca tattttgtcg cggttcctgc
     4861 tgggcgtttt tcaaactgat agccctgagc ctccatctca ccgactgcac catccacgct
     4921 tgcgcgcgtt aattttggaa gcttagctac agcagacttt gaatagactt gataaaaaac
     4981 atcagcctga aactcctgct tttgctcctg aatctgtttt gttagggcga gcaacatttt
     5041 atctgcacgc tgcgcaacct tacttaactg ctcaaaacta gtcattcccc ctccgtgcta
     5101 tgtaggattt taacttatta caaaaaaaac tgcattagca gggtaatgca tgcaagtaca
     5161 tattgtacat gcttatatta aaaatgcgcg cattgctgat ttattaatca tcggaatgaa
     5221 tattactgta agatagtatg cctttccggg agaaagacgc tgatttcccc cgaataatcc
     5281 agttcaccac cacactccgg acaacagctt tcttcaggct ccagatggtg tatttcgcgg
     5341 gaaacatgtt ccggtaacgg acggcgatga cgtgactgtc gcaacaggcg ggggtagtgc
     5401 ttccaatcag tagaacatgt gcttttcaat gaaggagccg atgacttttt cgtggatttc
     5461 cacggaacgc gagaagcaga ttgttttacg tgccagccgc ttgatgcggg tgcggagggt
     5521 ccggttgtta cgttcaatac gttgcgtgaa gattttgccg gtcaggtgtt tctccttcgg
     5581 cacttctctg gcgtagctgc cccagtcatc gctggtcacc atgccgatac agaacggagt
     5641 caacagggct aacagttccc gacaggtctc atcattccgt ggcccgaaag tgtaagccaa
     5701 cacaccgcca gttttagtgt tgtacgcata ccagagccag tgttgtgtca acgacggatg
     5761 aaaagtgatc cacttatatc tccaccaacg gcccaatatt gatccaccgt tttactcagg
     5821 attagcttct gctataaccc cggcctttcg tttttgtctg agtcgatagc tttctccttt
     5881 gattttaacg acatgtgagt ggtgtaagat acggcccagc atcgctgagg tcagtgctgc
     5941 atcaccggcg aacgtttgat cccactgccc gaacggtaga ttggatgtca ggatcattgc
     6001 gctcttttcg taacgtttag cgatgacctg gaagaacagt tttgcttctt tctgactgaa
     6061 cggcagatag cctatttcat caatgatgag caggcggggg gccattactc cacgctgaag
     6121 cgtcgtttta taacggccct gacgttgtgc cgtagataac tgaagtaaca gatctgctgc
     6181 tgttgtgaag cgaactttga tacctgcacg gactgcttca tagcccatc
//
LOCUS       DAJVTL010000192         5994 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.194, whole genome shotgun sequence.
ACCESSION   DAJVTL010000192 DAJVTL010000000
VERSION     DAJVTL010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5994
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.194"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(168..803)
                     /gene="msrQ"
                     /locus_tag="OQQ26_004041"
     CDS             complement(168..803)
                     /gene="msrQ"
                     /locus_tag="OQQ26_004041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HCS1859311.1"
                     /translation="MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
                     HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
                     NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL
                     APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV"
     gene            complement(804..1808)
                     /gene="msrP"
                     /locus_tag="OQQ26_004042"
     CDS             complement(804..1808)
                     /gene="msrP"
                     /locus_tag="OQQ26_004042"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HCS1859312.1"
                     /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHA
                     DLLSWFKGNDRPPAPAGKALEFSKPAAWQNNLPLTPADKVSGYNNFYEFGLDKADPAA
                     NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYADQVASLYRGLDLRENF
                     "
     gene            complement(1917..2330)
                     /gene="hiuH"
                     /locus_tag="OQQ26_004043"
     CDS             complement(1917..2330)
                     /gene="hiuH"
                     /locus_tag="OQQ26_004043"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HCS1859313.1"
                     /translation="MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQTGKPAAD
                     VTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLES
                     FFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS"
     gene            2463..3134
                     /gene="hprR"
                     /locus_tag="OQQ26_004044"
     CDS             2463..3134
                     /gene="hprR"
                     /locus_tag="OQQ26_004044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707854.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HCS1859314.1"
                     /translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD
                     YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF
                     SFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLA
                     SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF
                     VAVKK"
     gene            3134..4492
                     /gene="hprS"
                     /locus_tag="OQQ26_004045"
     CDS             3134..4492
                     /gene="hprS"
                     /locus_tag="OQQ26_004045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     HprS"
                     /protein_id="HCS1859315.1"
                     /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT
                     LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDDMLN
                     NIPASETISAVGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
                     SIIICIVAIILCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPL
                     GQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA
                     GNIEELENISRLTENILFLARADKNNVLVKLDSLFLNKEVENLLDYLEYLSDEKEICF
                     KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDVASPGTK
                     IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYFNKHNVFRITLPQ
                     RN"
     gene            complement(4600..5451)
                     /gene="hchA"
                     /locus_tag="OQQ26_004046"
     CDS             complement(4600..5451)
                     /gene="hchA"
                     /locus_tag="OQQ26_004046"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase HchA"
                     /protein_id="HCS1859316.1"
                     /translation="MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKP
                     YRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMT
                     KFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHCALIG
                     LPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHDDNPLNGYSICAFPDAADKQTP
                     EIGYMPGHLTWYFGEELKKMGMKIINDDITGRVHKDRKVLTGDSPFAANALGKLAAQE
                     MLAAYAG"
BASE COUNT         1647 a         1256 c         1441 g         1650 t
ORIGIN      
        1 tagtttcctc aggtgcacct atctatctta ttgaaataaa atgaattatg ttgataattt
       61 gaggttgatg acaaacgaaa cataatctga tgtgatctgc gtaggccgga tagggcgctc
      121 gcgccgcatc cggcagggat aacgcgtact ttgtcggcaa tatgaagtta tacagataat
      181 ttgttgtgaa cctgcttgcg taaccggtta aaaagggaac gcaacttctt ataccgtaag
      241 gctaaaagca gtacagccag cccagcgtag atgagcggct gcggtgaaat aatcttcact
      301 gaccacagat aatgtattgg ggccaggatc gcgacaagat agacgaaatt atgcaactgt
      361 tgccagtgct tgccgagttt tcgctgcatc gcttgggttg aagtaaacgc taaagcaagc
      421 aaaataaccc agctgataat tcctaacgtt aaataaggcc gggtaattaa ctccttgcct
      481 aataacgcca gattattcac gcccagctcc agcaatgcgt aactggttaa atgcagtgtc
      541 gcccaggcaa agcaccataa gcctaacagg cggcgagtgc gtatcaataa cggctgtttt
      601 gcgtagcgtg ccagaggtgt gattaacaag gtcgccagca aaaatttcag tgcagtgcga
      661 ccggtaaaat gctgaatatc tttcaccgga tcggcaccca gtccaccgtg attgatcgcc
      721 cagaccagcc agagaaacgg caacaatccg gcaagatgca ggcaaacttt cagccatgtc
      781 acctgttttg ctgtcagacg cattcagaaa ttctcccgca aatctaggcc acgatacagc
      841 gatgccacct ggtcggcgta accattaaac agtagcgttg gctggcgctg tacatcgagg
      901 atgccgcctg aaccaataaa tcgttcggta gcctgtgacc agcgcgggtg atcaacatgc
      961 ggattaacgt tggcgtaaaa accgtattcg tcaggtgctg ccagattcca agtggttggc
     1021 ggacgctcgc gggtcagctt aatactgact atcgatttaa tccctttaaa gccatatttc
     1081 cacggcacaa tcagtcgcac cggcgcgcca ttttgtggcg gtaacgcctt gccataaaca
     1141 cccacggtca tcagtgtgag cggatgcatt gcttcgtcga gacgcaatcc ttcgacataa
     1201 ggatatttca gcccgccgcc gataaagcgg tcctgctgtc ctggcatctg ttccggtgca
     1261 taaattgttt cgaaagcgac atacttcgca ttgctggtgg gttcggcaag cgccagcaat
     1321 ttgtgcagcg gaaaaccaat ccacggcacc accatcgacc atgcctccac gcagcgcata
     1381 cgataaatac gctcttccag cgggaagcga cgggttaaat catcgtgatc gagggtcaat
     1441 ggttttgcca cttcgccgct gattttcagt gtccatggat cggttttcag gctaccagca
     1501 ttagcggcgg gatcggcttt atccagcccg aattcataga agttgttata gccggaaact
     1561 ttatctgctg gcgtcagtgg cagattattt tgccaggcgg caggcttgct gaactccagc
     1621 gcttttccgg cgggggcggg cgggcgatcg ttccctttaa accagctaag cagatcggca
     1681 tgcgcagcgt gaggcaaaga aagtgcagct gcgctgatgc ccagtgcttt taacacctgc
     1741 cgacgcttca taaagaatac cgactcggcc gtaacatctg attcttttaa aaattgattc
     1801 tttttcataa gccatcacac ttttttgtcg ttagccagca agagccgttt actgttaatc
     1861 tgtcagggag tgtcctccct aacagtagca gagatctgct tttacatatt tatgcattaa
     1921 ctgccacgat aggttgaata cccatattgg ctaagtaata aaggcacatg ataatgctcg
     1981 ttcactttat taatatgaaa ttcaacgggg atctcaggga agaaactttc aagattttgt
     2041 ttcttgaaat agtctccagt tttaaatacg acacggtaat cgcccgtagt tgcagtttgc
     2101 tcgggccaca gtgccttaat tcgtccatcc ttatctgttt tggcggtatt aagttgtaac
     2161 cagccgttat ccgccttctt ttcaagagtg actgtcacgt cagcagcggg ttttcctgtt
     2221 tgctggttca aaatgtgcac gctaagaatg ttttgttgtg cggcataaac caaagaaggt
     2281 aatgaaaatg ctgccgttgc taccgagagt actaaataac gctttaacat gtttatatcc
     2341 ttgtcatctg aatgagtttt gaggatagcg aaaaaacgtc cagggtaacc ttacagcagc
     2401 attacaattt tgtaatgaac caggctgttt ctataacata tgatttatgg catattattt
     2461 tcatgaagat tttacttatt gaagataatc aaaggaccca ggagtgggta acgcaggggc
     2521 tttccgaagc gggttatgtc attgatgccg tttctgatgg cagggatggg ctttatcttg
     2581 cgctgaagga tgattatgca ttgatcattc tggatattat gcttccgggt atggatggct
     2641 ggcagatctt acaaacgtta agaacagcaa agcaaacccc tgttatttgc cttactgcaa
     2701 gggattctgt cgatgacaga gtcagagggc tggacagtgg agcaaatgat tatctggtaa
     2761 aacctttttc attttctgag ttgctggcaa gggttcgggc acaattaagg caacatcacg
     2821 ctctgaattc aacattagaa atcagcggat taagaatgga ctctgttagt caaagtgtga
     2881 gcagggacaa tatcagtatt acactgacgc gcaaggagtt tcagttactt tggctactgg
     2941 cctccagagc tggcgaaatt atacccagaa cggttattgc cagtgaaatt tggggaatca
     3001 actttgatag tgataccaat acggtggacg tcgccattcg caggctccgc gcaaaagttg
     3061 atgatccttt tcctgaaaag ctaatcgcca caatccgggg gatgggctat tcattcgtag
     3121 cggtaaaaaa ataatgaaaa gattatctat aaccgtccgt ttaaccttgc tttttatatt
     3181 gctactgtct gttgctggcg ctggaattgt ctggactctc tataatggcc tggcaagtga
     3241 gttgaaatgg cgcgatgata caacactcat taaccggaca gcacagatca agcagttgtt
     3301 aattgatggg gtaaatccag atacgttacc tgtatacttt aaccggatga tggatgttag
     3361 tcaggatatc ttgatcattc atggtgatgg catcaataaa attgttaacc ggacaaatgt
     3421 cagtgatgac atgttaaata acatacctgc tagtgagaca atcagcgcag ttggcattta
     3481 cagaagcatt attaatgaca cagagataga tgctttacga attaatattg atgaagtttc
     3541 gccatcatta acggttactg tggctaaatt ggcttcagcc agacataaca tgcttgaaca
     3601 gtataaaatc aatagcatta taatttgcat tgtcgccatt atactgtgct cagtattaag
     3661 tccgctgtta atcagaacgg ggttacgaga gatcaaaaag ttgagtggtg taacggaagc
     3721 gctgaattat aacgatagcc gggagcctgt tgaggttagc gcattaccga gagaactaaa
     3781 acctcttggg caggcgttga ataaaatgca tcatgcttta gtcaaagatt ttgagcgtct
     3841 aagtcagttt gctgacgatc tcgctcatga acttagaacg cccattaatg cattactggg
     3901 tcagaatcag gttacgctca gtcaaaccag aagtatcgct gaatatcaaa aaacaattgc
     3961 cggtaacatt gaagagctgg aaaatatttc gcggttaaca gagaacatac tgtttcttgc
     4021 ccgggcagat aaaaacaatg ttttggtgaa actggactcg ctttttctca ataaggaagt
     4081 cgaaaatttg ttggattatc ttgaatacct ttcagacgag aaagagattt gctttaaggt
     4141 cgagtgcaat cagcaaatct ttgcggataa aattttactg caacgaatgt tatcgaatct
     4201 tattgttaat gccattagat attcaccaga aaaatcgcgt attcatataa ccagttttct
     4261 tgataccaac ggctatctta atattgatgt cgccagtcct ggaacgaaaa ttcatgagcc
     4321 tgaaaaactc ttccgtagat tttggcgggg agataattcg cgtcattccg taggtcaggg
     4381 acttggtctt tctttagtca aagcgattgc cgaattacat gggggaagtg ctacgtatca
     4441 ctattttaat aagcataatg tgttccgaat tacgttaccg caaagaaatt aacatagggc
     4501 ttcagtacgc cataaatcaa ccatgaaaaa acgcagccac gtcgtgagta ttaacgtggc
     4561 tgcgattgat tatgcgctta cattcatacg taacagggat taacccgcat aagctgccag
     4621 catttcctgc gccgccagtt tacccaacgc attcgctgcg aaaggactgt cgccggtgag
     4681 aactttacgg tccttatgta ctcgcccggt gatgtcgtca ttaatgattt tcatgcccat
     4741 tttcttcagc tcttcgccga agtaccaggt gagatgaccc ggcatatagc ctatctctgg
     4801 cgtttgtttg tctgcggcgt ctgggaatgc gcaaatggaa taaccattca gtgggttatc
     4861 gtcgtggcga agcgccagaa aagccgccgg gccgtggcaa agggagataa caaaacggtc
     4921 atttttgatt gcccactgta aagcggcagc tacgtcctgg ctttcaggta aaccaataag
     4981 tgcgcaatga ccaccaggaa caaagattgc tgcatattcg ctatcagcgt tgaggctggc
     5041 gacaacatcc gcgagtttct tcggattgcg gaacaacgat ttatgctgct caaagaatgg
     5101 cattactttt tcatctttgt gcggcatagc ccagtattca aacttggtca tcagaccgga
     5161 aatggtcgcc acttcgaatt cgaaacctgc agcatggaga tgatacaacg gcagcaacgt
     5221 ttcaatcgga tggttaccgg tcgagaacag tttcccgtta tcggtcggca aataacgttc
     5281 gtccgcggcg atcaccagaa ttttatgttt accgcgatac ggttttggat agtccacgcc
     5341 atccagatca gagacaggac tggtatattg gctaagcgaa tattctgaag ggaagaatgc
     5401 attatcttca gcaatatcga cctgcggatt tttacttgtt tgaacagtca tagtgtattc
     5461 cttattgttg cttagttagg gtagtcacta tatttgcgac tgagctggtc gctattttta
     5521 accaggctgg aaaattgagt caatatatcg aaagcggtag tctgcgggtg taagtatgta
     5581 atgatgatgc tgcactggtg ttgaatatta ttcacgctaa attttcctta ttgagcaacg
     5641 tcgtcgcaag tggcctcaat gattttagac cattatcaga ggtacagggt ggcggggaga
     5701 gatatagtga tgtggaatat tgtggtgctg atgaatattt atatcgcgga ttggtagaga
     5761 gaaagcttat ttcatgcact atttttgcaa atatttctat atgggaagcg tgtttgttac
     5821 ggattaattc ataaagaaat gcatttgggt gttggctgga agagtcgctg gtagatgtta
     5881 ttgtgccagg agaggcaggg taaggggctg tatcgatatg ctttggcaat tgcgtgtgcc
     5941 gcagatggag atgaaatgcc aataaaaagc ctgagttcga tgagggacga actc
//
LOCUS       DAJVTL010000193         5991 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.195, whole genome shotgun sequence.
ACCESSION   DAJVTL010000193 DAJVTL010000000
VERSION     DAJVTL010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5991
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.195"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            368..2020
                     /locus_tag="OQQ26_004047"
     CDS             368..2020
                     /locus_tag="OQQ26_004047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858318.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HCS1859317.1"
                     /translation="MIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHG
                     HFWRNNHGEYGLSSQKTLVDNIRQKVINNGGSVLLLSGGDINTGVPESDLQKAEPDIR
                     GMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSANIYQKSTGRRLFSPWKIFIR
                     QNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPDIIIAATHM
                     GHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCV
                     PDKQNGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSF
                     YTPEITEDPQMLSLLTPFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSA
                     LTERIDADFAVVSGGEIRDSIESGNITYKDILKVLPFGNTVVSIDLTGKEVADYLATV
                     AQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKKYRMTTFSFNATGGDGYPR
                     IDNRPGYINTGFIDAEVLIEYIREHSPLDAASYEPKGEVSWQ"
     gene            complement(2031..2201)
                     /locus_tag="OQQ26_004048"
                     /pseudo
     CDS             complement(2031..2201)
                     /locus_tag="OQQ26_004048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(2334..2453)
                     /locus_tag="OQQ26_004049"
                     /pseudo
     CDS             complement(2334..2453)
                     /locus_tag="OQQ26_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(2527..2961)
                     /locus_tag="OQQ26_004050"
     CDS             complement(2527..2961)
                     /locus_tag="OQQ26_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HCS1859318.1"
                     /translation="MDTFKRRNVATSFSFLGYDFKVRTLKNFKGELYRKCMPGASNAA
                     MCKITETIKKWRIHRSTAESLLDFARRYNAIVRGWIEYYGKFWSRNFSYRLWSAMQSR
                     LLKWMQSKYRLSNRKAQRKLALVRKQYPKLFAHWYLLRASNE"
     gene            complement(3138..4447)
                     /gene="ltrA"
                     /locus_tag="OQQ26_004051"
                     /pseudo
     CDS             complement(3138..4447)
                     /gene="ltrA"
                     /locus_tag="OQQ26_004051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019332377.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            complement(4511..4726)
                     /locus_tag="OQQ26_004052"
                     /pseudo
     CDS             complement(4511..4726)
                     /locus_tag="OQQ26_004052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611997.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            5089..5838
                     /locus_tag="OQQ26_004053"
     CDS             5089..5838
                     /locus_tag="OQQ26_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HCS1859319.1"
                     /translation="MKRQLFTLSIVGVFSLNTFASFPPGNDVTTKPDLYYLTNDNAID
                     SLALLPPPPQIGSIAFLNDQAMYEKGRLLRNTERGKLAAEDANLSSGGVANVFSAAFG
                     SPITAKDSPELHKLLTNMIEDAGDLATRSAKEYYMRIRPFAFYGVSTCNTKEQDTLSR
                     NGSYPSGHTSIGWATALVLSEINPARQDTILKRGYELGDSRVICGYHWQSDVDAARIV
                     GSAIVATLHSNPVFQAQLQKAKDEFANNQKK"
BASE COUNT         1603 a         1402 c         1347 g         1639 t
ORIGIN      
        1 atcggaaacg atgatctggc agcctgagtt cacagataaa acattctcca ggaaacttgg
       61 ggcggttcac gtcagtatca gaccatatta attgctgaaa ctgataaaca tcaaacctta
      121 tagaagggtg aatgctgaaa gggggctatg gtgatcgacg tgatgacaac gacaggtaag
      181 accgtgacct gataaacctg aattgtgtcc tagacataaa gtccgtgaag ggaataaggc
      241 tcaggtcagc gaatcttata gtggcccgca gctctgactg taataaggcc ggatacagag
      301 cagcaactac tcgtcgatgt cagaacaacg gaagccttgc aaacggggat gcgttcatac
      361 aggtacaatg ataccgttaa aaaaaaacat tacgctaata atgttcaccc tgtcattact
      421 gacaggaaat cctgctatag cgtatgaaac agataaagta tataaaataa ccgttctgca
      481 tacaaatgac caccatggac acttttggcg taacaatcat ggtgagtacg ggttatcctc
      541 ccaaaaaact ctggtggaca atatccggca gaaagtaata aataatggcg gaagtgttct
      601 attattatct ggtggtgata ttaacaccgg tgtacctgaa tcagaccttc agaaggctga
      661 acccgatatt cgtggaatga atctaattgg ttatgatgca atggccgtcg gtaatcatga
      721 atttgataat cctctaaata tattacgtca gcaggaaaaa tgggccacat ttcctttcct
      781 atctgctaac atatatcaaa aaagtacagg gaggcgttta ttcagtccat ggaaaatttt
      841 catccgtcag aatttgaaaa ttgcagtcat tggcttgacg acagatgata ctgcgaaaac
      901 aggaaattct gaatatttta ctgatattga gttccgtcaa cctgctgctg aggcgaggag
      961 tgtcattgat gaacttaatc agcaggaaaa gccagatatt attattgcgg caacacatat
     1021 gggtcactat gacaatggcg agtcaggttc gaatgctcct ggtgatgttg aaatggctcg
     1081 cagtttgccg actggctcat tagcaatgat tgtgggagga cattcacaag ctcctgtctg
     1141 catggccagc gataataaaa aacagtggaa ttatattccg gggacaacct gtgtaccaga
     1201 taaacaaaat ggcatctgga ttgtacaagc gcatgagtgg ggaaaatatg tcggtcaggc
     1261 tgattttgaa ttctgtaacg gtacaatgaa actggttaat tatcagttac acccagttaa
     1321 tctcaaaatg agaattacca gagaagatgg aaaaacggaa ttttcttttt acacccccga
     1381 aattactgaa gatccacaga tgttatcctt actgacacca ttccagaata aaggcaaagc
     1441 acaactggat gtgaaggttg gggttgtgaa cggacgtctg gaaggggaca gaagtaaagt
     1501 tcgttttgtt cagaccagta tgggccatct gattctgagc gctctgacag aacgtattga
     1561 cgcagatttt gctgttgtca gtggtgggga aattcgagat tccatagaga gtggtaacat
     1621 cacatacaaa gatatactga aagttctgcc atttggtaat acggtagtaa gtattgattt
     1681 gacggggaaa gaagtagctg actacctagc tacagtggca cagatgaaac cggattccgg
     1741 agcctaccca caatttttga ataccagctt tgtagtcaaa aaaggaaaaa tcgaaatgct
     1801 aaaaataaaa ggtaaatcgg ttgaccttaa caaaaaatat cgtatgacaa catttagttt
     1861 taatgctact ggtggggatg gctatccacg tattgataat agacccggat acataaatac
     1921 cggatttatt gatgctgaag tacttatcga atatatccgg gaacattcac cgctggatgc
     1981 tgcttcatat gaaccaaaag gtgaagtcag ttggcagtga taacgtaatt gacgatcatc
     2041 acgtgttttt tgctgacagt cgctgtgact ttgtgaaagt agtctctgcg gatgtttgcg
     2101 atatgggaat gcagttgctg tattttgtgt ttctgcttct gccagttgtt gctgaattta
     2161 accttgcggc ttaactgatg ttggagcgct gccagcttct tcgtcaattt cgctgattaa
     2221 agtttattca ttatggcatg atctgcgtaa gcggctcgtc agaaccgtat tgatatttac
     2281 taagagctca gatcaacttt ccagggcaac agatcgcgta cccggtttgc cggtcagtcc
     2341 tggatatgct caatgacgta acgcagccat ttttctggct ccacattgtt cagacggcat
     2401 gtgccgatca gcgagtacaa caccgccgca tgttcgccac cgctatcgga accccgccgg
     2461 agagagtttc actctccggc tgctcacgga accgtacgtg acactctcgc gtcatacggc
     2521 tcttgatcac tcattcgatg cacgtagtaa ataccagtgg gcaaatagct tcggatactg
     2581 tttccttacc agcgccagct ttcgctgagc cttccggttc gaaagtctgt atttagactg
     2641 catccactta agcaaacgtg actgcattgc actccacagt cgatagctga agtttctgga
     2701 ccagaacttt ccatagtact caatccagcc tctcactatc gcattgtagc gcctcgcaaa
     2761 atccagcaaa ctctcagctg ttgagcgatg tatacgccac ttcttgattg tttctgttat
     2821 tttgcacatt gctgcatttg atgcacccgg catacatttt ctgtacaatt cgcctttgaa
     2881 attcttcaga gtacgcactt tgaagtcata tccgagaaag gagaaactcg tagcgacgtt
     2941 tctcctttta aacgtgtcaa tgtaggcgat attcgtcttc cctgcgttca ggaccaaccc
     3001 gacttccgag aagcgcaccg ataacctgtt cttcagcctt gttgcatcac tcattcgtga
     3061 acaatgtact acaagtcgag tcacccgagg gaacctcccc ctctggtgct cacggaaccg
     3121 gacgtgaacc tctcagctca tccggctctt ctcattgagg cctgtcccca tagtaacggc
     3181 cagtgtgcaa acaacctcgt ttcactccgc gcaacacggg ccagccagtg gctggcccgt
     3241 cgtcggtggc ccctaagtcg cttgtgttta cggggcagcc ataacacgag tttgcgatcg
     3301 atttgcctca gcgtcagata cagtgctgat ttataaaaag caccgtagta ctttatccag
     3361 cctctgattt tcgcattgaa catatgcgcc agctcgtaca aggacttgtc actgcgattc
     3421 tcctcacctc ctgacggatt gcttttcctg ctctggcact catcgccgga ctgaagttaa
     3481 cgaaggtctt accccagcga ttcatcgaca gacgcggccg gaatgtatag cccagaaagt
     3541 cgaagctcgt ttccgggtag tccacccgtc ggtcagcatc cttacagtaa actattcgtg
     3601 ttttttgcgg atgcaactgc agcccgcatt gcgcaagccg ctgcctcagt ccacttatca
     3661 gagcgtcagc ctgcaactgg ctgtgacagt ggcatacaac atcatcggcg tacctttcga
     3721 agggaacgcc gggaaactga cgttgcatcc acatatcaaa ggcatagtgc aggaacagat
     3781 ttgagagcag gggggagatt acgccgccct gcggcgttcc tcgaccccgt gccagcattg
     3841 ctccatccgg catttgcacc ggtgccttca gcctgcgctc aatgtacatc accacccagc
     3901 gtgcctgagt atgatgctgc actgtcttca gtagcaggtc atgatcgata tcatcaaaga
     3961 agcctttaat atcgacttcc accacccagt caaacttcca gcagcgtttc ctcgcctgcg
     4021 caatcgcctg gtgtgcagat ttacccggtc gataaccata cgagtctgca tggaacaggg
     4081 gttccagtac cggctcgagt atctgcttaa cgaccatctg ggcgatccgg tccgacacgg
     4141 ccggaatacc gagcggacgt acaccaccgt cagctttggg aatgtccaca cgccttaccg
     4201 cctgcggcat ataactgccg gaagccattc tgttccacag tttgtagaga ttgtctgtaa
     4261 cattctcgtc aaacccggcc agtgtctgcc cgtcaatgcc tgccgcccca cggttggctt
     4321 ttactcgttt ataagcttcc catacctgtc gtttacttac aggaaatggc tttgccgatt
     4381 ttacagcagt cctcccatcg gcattgtcgc ccgtggttgc cgccgcacca tcagcacaat
     4441 ggggcaagcc ctttgctccg gacccattac ggtccttcac cgctactacg gtttactccg
     4501 tccctgtacc atttttcagc gttccccaga agctttccat cggagcgttg tcgtaacagt
     4561 tacctttacg cgacattgat gttttcagac caaactgctc ctgtatgacc cggtaatcgt
     4621 atgcgcagta ctgtgaacct cgatcggagt ggtggattag cccggcaggt gggcgctggc
     4681 tcctgagcac cataaacagg gctttacccg tcaatattgg ctccttctga tgccattcta
     4741 tttcaggaag gagtgtccgt taaactcagg ctacctcaaa aagttatcgg tgcgtttatc
     4801 gaaaaacata tgttctacta attggagtca ttgtctgtaa aagcaactca aaaatacaag
     4861 ttgcttattc cccttgttgg taagaactta attctaactg tttgttctgg gtgttttaaa
     4921 cgtcctcctt tttatgcttg ttcataacgg atatttaata ggtaaccttt gttttagcat
     4981 cttctgattt atttaaatta tgtgatagcg cacacaattt tattatccag tactttatac
     5041 tcttaataaa ataattataa atatttatcc tctataagga gatgttatat gaaaagacag
     5101 ctttttactc ttagtattgt cggggtattt tctttaaata cctttgcatc attccctccg
     5161 ggaaatgatg tgacaacaaa acctgacctt tactacctga caaatgataa tgctattgac
     5221 agtctggcat tattaccgcc tccaccacaa atcggaagta ttgccttcct gaatgaccag
     5281 gccatgtatg aaaaggggcg tttattgcga aatactgaaa gagggaagct ggcagctgag
     5341 gatgccaatc tcagtagtgg tggcgtggca aatgtatttt ctgctgcttt tggttctccg
     5401 ataacggcta aagattcacc agaattgcat aaattactga caaatatgat tgaggatgcc
     5461 ggagacctgg caacgcgttc agcaaaagaa tattatatgc gtattcgacc ttttgctttt
     5521 tatggtgttt ctacgtgtaa tacaaaagaa caggatacat tatccagaaa tggctcttat
     5581 ccatcaggtc atacatcgat tggttgggca acagcacttg tattgtccga aataaatccg
     5641 gcacgccagg ataccattct gaaacggggt tatgaactgg gggacagcag ggttatttgc
     5701 ggttatcact ggcaaagtga tgttgacgca gcacgtattg ttggctctgc tattgtagca
     5761 acactgcact caaatcctgt gttccaggca caattacaaa aagcgaaaga tgaattcgct
     5821 aacaatcaga aaaaataatg cttttagcca gtacgcctta taaccccgat cttcagggct
     5881 aatgccagtc agttaagcaa ctgactggct ctttttcagg gctgtggggt atttccaggg
     5941 cctctccttt accactctcg ggaaggccct ttcccttctt gtcggtaatt t
//
LOCUS       DAJVTL010000194         5985 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.196, whole genome shotgun sequence.
ACCESSION   DAJVTL010000194 DAJVTL010000000
VERSION     DAJVTL010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5985
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.196"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            110..892
                     /locus_tag="OQQ26_004054"
     CDS             110..892
                     /locus_tag="OQQ26_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012134496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859320.1"
                     /translation="MKKTSFITTLLFLSLSSLSCHAASLLASSPQAKMSGDNKTIALY
                     GNSFTFYNNNINTRLCDLAQSLLSDKAKGYQYRGITISSGRLEWQINNLEYQNSLQKW
                     DAVIFQGNSMEPISKKEDSRKSFTESALKMSDMAHKAGSKVVWFMTWAAKDKPENTKK
                     LADAYIDIAKQTGGYVAPVGLAFDKARKVHPEINLYYQDGVHPSLEGTYLAACVFFVT
                     LYNQTPVGGALPTDTNMTPETAKALQQIAWDTVTEFQSSSSM"
     gene            1136..3697
                     /gene="mutS"
                     /locus_tag="OQQ26_004055"
     CDS             1136..3697
                     /gene="mutS"
                     /locus_tag="OQQ26_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HCS1859321.1"
                     /translation="MSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDA
                     KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
                     KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
                     ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
                     TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
                     LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMTVRDTRVLLERQQTIGALQDF
                     TAELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
                     LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
                     EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
                     YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
                     YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
                     RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
                     NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
                     GVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
                     ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLL"
     gene            3803..4459
                     /gene="pphB"
                     /locus_tag="OQQ26_004056"
     CDS             3803..4459
                     /gene="pphB"
                     /locus_tag="OQQ26_004056"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HCS1859322.1"
                     /translation="MPSIRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETD
                     LLISVGDNIDRGPESLNVLRLLNQPWFISVKGNHEAMALDAFATGAGNMWLASGGDWF
                     FDLNDSEQQEAIDLLLKFHHLPHIIEITNDNIKYVIAHADYPGIEYLFGKEIAESELL
                     WPVDRVQKSLNGELQQINGVDYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIK
                     "
     gene            complement(4510..5277)
                     /locus_tag="OQQ26_004057"
     CDS             complement(4510..5277)
                     /locus_tag="OQQ26_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HCS1859323.1"
                     /translation="MIPVERRQIILEMVAEKGIVSIAELTDRINVSHMTIRRDLQKLE
                     QQGAVVLVSGGVQSPGRVAYEPSHQVKTALAMTQKAAIGKLAASLVLPGSCIYLDAGT
                     TTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATM
                     LRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWL
                     ALSLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
     gene            5473..>5985
                     /locus_tag="OQQ26_004058"
     CDS             5473..>5985
                     /locus_tag="OQQ26_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HCS1859324.1"
                     /translation="MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACAT
                     LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
                     IASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAV
                     AGKVYRISAEP"
BASE COUNT         1554 a         1509 c         1484 g         1438 t
ORIGIN      
        1 agacacatgg ttatcattga cttacgataa agccttcgcc agtaaaaatg aaaaaattaa
       61 cgatgatgct ttcattgtcg gacttcgtta tgacttttaa gagattatca tgaaaaaaac
      121 atcttttatt acgacactgt tattccttag cttaagttca ttatcctgtc atgccgcatc
      181 attattagcc tcctcacccc aggctaaaat gtcaggtgat aataaaacaa ttgcactata
      241 tggaaactcc tttacttttt ataataataa catcaatacc cgactatgtg atttagcaca
      301 atcactattg tcagacaaag ccaaaggata tcagtatcgc ggaataacaa tttccagtgg
      361 ccgtctggag tggcaaataa ataatcttga gtatcaaaac tcattgcaaa aatgggatgc
      421 cgttattttt cagggaaatt caatggagcc aatttcaaag aaagaagatt cccgaaaaag
      481 ttttaccgag tcggcattaa aaatgtctga tatggcacat aaagcaggtt caaaggttgt
      541 ctggtttatg acatgggcag caaaagataa acctgaaaac acaaaaaaac ttgccgacgc
      601 ctatattgat atcgcaaagc aaacgggtgg ttatgttgct ccagttggcc tggcttttga
      661 taaagcgcgg aaagttcatc cagaaatcaa tctctactat caggatggcg tgcatccttc
      721 tctggaagga acttacctgg cagcctgcgt attctttgtc actctgtata atcaaacacc
      781 agtcggagga gctttaccca ctgataccaa tatgacgcca gagacagcca aagcattaca
      841 gcaaattgcg tgggatactg tgacagaatt tcagagttcg tcatcaatgt aaaaagcccc
      901 cacctcctca atatcccagc acgccactgc tttatcggcg tgttctggga gtcacattcc
      961 agaattctgt aaaatctcag tacaataatt tcaaatcagg aaccggcatc aagaactgtc
     1021 acatcgcttc ttcccctgaa atgattaact ccggtatcat gtgcgcctta tgtgattaca
     1081 acgaaaataa aaaccatcac accccattta atatcaggga accggacata accccatgag
     1141 tgcaatagaa aatttcgacg cccatacgcc catgatgcag cagtatctca agctgaaagc
     1201 ccagcatccc gagatcctgc tgttttaccg gatgggtgat ttttatgaac tgttttatga
     1261 cgacgcaaaa cgcgcgtcgc aactgctgga tatttcactg accaaacgcg gtgcttcggc
     1321 gggagagccg atcccgatgg cggggattcc ctaccatgcg gtggaaaact atctcgccaa
     1381 actggtgaat cagggagagt ccgttgccat ctgcgaacaa attggcgatc cggcgaccag
     1441 caaaggtccg gttgagcgca aagttgtgcg tatcgttacg ccaggcacca tcagcgatga
     1501 agccctgtta caggagcgtc aggacaacct gctggcggct atctggcagg acagcaaagg
     1561 tttcggctac gcgacgctgg atatcagctc cgggcgtttt cgcctgagcg aaccggccga
     1621 ccgcgaaacg atggcggcag agctgcaacg tactaatccg gcggaactgc tgtatgcaga
     1681 agatttcgcc gagatgtcgc tgattgaagg ccgtcgcggc ctgcgccgtc gcccgctgtg
     1741 ggagtttgaa atcgacaccg cgcgccagca gttgaatctg caatttggca cccgcgatct
     1801 ggtcggtttt ggcgtcgaga acgcgccgcg cggactttgt gctgccggtt gtctgttgca
     1861 gtatgcgaaa gatacccaac gcacgaccct gccgcatatt cgttctatca ccatggaacg
     1921 tgagcaggac agcatcatta tggatgccgc gacacgtcgt aatctggaaa tcacccagaa
     1981 cctggcgggc ggtgcggaaa atacgctggc ttctgtgctc gactgcaccg tcacgccgat
     2041 gggcagccgt atgctgaaac gctggctgca tatgacagtg cgcgataccc gcgtgttgct
     2101 tgagcgccag caaactattg gcgcattgca ggatttcacc gccgagttgc agccggtact
     2161 gcgtcaggtc ggcgacctgg aacgtattct ggcacgtctg gctttacgaa ctgctcgccc
     2221 acgcgatctg gcccgtatgc gccacgcttt ccagcaactg ccggagctgc gtgcgcagtt
     2281 agaaactgtc gatagtgcac cggtacaggc gctacgtgag aagatgggcg agtttgccga
     2341 gctgcgcgat ctgctggagc gagcaatcat cgacacaccg ccggtgctgg tacgcgacgg
     2401 tggtgttatc gcatcgggct ataacgaaga gctggatgag tggcgcgcgc tggctgacgg
     2461 cgcgaccgat tatctggagc gtctggaagt ccgcgagcgt gaacgtaccg gcctggacac
     2521 gctgaaagtt ggctttaatg cggtgcacgg ctactacatt caaatcagcc gtgggcaaag
     2581 ccatctggca cccatcaact acatgcgtcg ccagacgctg aaaaacgccg agcgctacat
     2641 cattccagag ctaaaagagt acgaagataa agttctcacc tcaaaaggca aagcactggc
     2701 actggaaaaa cagctttatg aagagctgtt cgacctgctg ttgccgcatc tggaagcgtt
     2761 gcaacagagc gcgagcgcgc tggcggaact cgacgtgctg gttaacctgg cggaacgggc
     2821 ctataccctg aactacacct gcccgacctt cattgataaa ccgggcattc gcattaccga
     2881 aggtcgccat ccggtagttg aacaagtact gaatgagcca tttatcgcta acccgctgaa
     2941 tctgtcgccg cagcgccgta tgttgatcat caccggtccg aacatgggcg gtaaaagtac
     3001 ctatatgcgc cagaccgcgt tgattgcgct gatggcctat atcggcagct acgtaccggc
     3061 gcaaaaagtc gagattggcc cgattgaccg tatctttacc cgcgtaggcg cggcagatga
     3121 cctggcttcc gggcgctcaa cctttatggt ggagatgact gaaaccgcca atattttaca
     3181 taacgccacc gagtacagtc tggtgctgat ggatgagatc gggcgtggaa cgtccactta
     3241 cgatggtctg tcgctggcgt gggcgtgcgc ggaaaatctg gcgaataaga ttaaagcgtt
     3301 gacgctgttt gccacccact atttcgagct gacacagtta ccggagaaaa tggaaggcgt
     3361 cgccaacgtg catctcgatg cactggagca cggcgacacc attgccttta tgcacagcgt
     3421 gcaggatggc gcggcgagca aaagctacgg cctggcggtt gcagctctgg ccggcgtgcc
     3481 aaaagaggtt attaagcgcg cacggcaaaa gctgcgtgag ctggaaagca tttcgccgaa
     3541 cgccgccgct acgcaagtgg atggtacgca aatgtctttg ctgtccgtac cggaagaaac
     3601 ttcgcctgcg gtcgaggcac tggaaaacct ggacccggat tcactgactc cgcgtcaggc
     3661 gctggaatgg atttatcgct tgaagagcct gctgtaataa caattcccga tagtcttttg
     3721 ctatcgggaa tattaacgac aactgacgaa tcaaataaaa ataccctgta taataggaaa
     3781 gcttatttta cagggtaaaa ccatgccatc tatacgctat caaaaaatca atgcccatca
     3841 ctatcgccat atatgggtcg ttggtgatat tcatggtgaa tatcagttat tacaatcccg
     3901 cttacatcaa ctctcttttt gccctgaaac cgacttactt atttctgtcg gcgataacat
     3961 cgatcgtggg ccggagagtc ttaacgtcct gcgcctgcta aaccagccct ggtttatctc
     4021 cgttaaaggc aaccacgaag caatggcgct ggatgcgttc gcgaccggcg ctggcaatat
     4081 gtggcttgcc agcggtggtg actggttttt cgatttaaat gattcagagc aacaagaggc
     4141 aatagacctg ttgctgaaat tccatcacct tccacatatt attgaaatca ctaacgacaa
     4201 cataaaatat gtcatcgcac atgcagatta tccggggatt gaatatctct ttggtaaaga
     4261 aatagcggag agcgaattac tctggcctgt tgatcgtgtg cagaaatcgc ttaatggcga
     4321 gttacaacaa ataaacggcg ttgattattt tatatttgga catatgatgt ttgataacat
     4381 tcagacgttc gctaaccaga tttatattga taccggatcg ccgaaaagcg ggcggctgtc
     4441 attttataaa ataaagtagt ctcatgcttc ttctgtgaag catgagtaac ccggtgttat
     4501 tgcaggccat tattcatttt tcgctaccag caaagagaga tcctgcttcg ccagcgcgcg
     4561 actggcactc tccggcaaac cgtcgtctgt aatgatctga tcaaactcgc ttaatgataa
     4621 cgccagccat gtcgccacct gaccatattt cgtcgcatca cagaccaaaa ctcgctggcg
     4681 gctggcactg gcaatcgccc gtttcaccgt gactttatct tccgctggcg tagaaatccc
     4741 ccgcacactc catgacgatg cagaaataaa agcctgatca atcatcaggc tgcgcagcat
     4801 ggtcgcagcg gcttccccga cacaggaacg gttttcccga cacactgcac cgccagtgtg
     4861 aataattgtg caattactgt tgtcgagcaa gtagttcgca ataacgaaat cgtttgtgac
     4921 cacagtcagt gactccatgt gaatcagatg ctgtgctatc gctaacgtgg tcgttcccgc
     4981 atccagatag atacaacttc ccggcagaac aagacttgcc gccagcttgc caatagccgc
     5041 tttttgcgtc attgccagcg cagtttttac ctgatgagaa ggttcatacg ccacgcgtcc
     5101 cggagactgg acgcctccgg acaccagcac aacggctccc tgctgctcca gtttttgtaa
     5161 atcccgacga atggtcatat gtgacacatt aattctgtcc gttagttcag caatactgac
     5221 aatgcctttt tcagctacca tctcaaggat gatttggcga cgctctacgg gtatcaactt
     5281 ttgctccttc ctttgtcctg ctgacattct acgctatttg cctgcgaaac gtgcgcggcg
     5341 caactaacgc ttagttcaca taaaataaca cacaatgtta atttacgtga atcagttcac
     5401 catatcgtta tcttccagcg cttatattca caatatcaaa caaaatatca cttaaattaa
     5461 caaggagagc agatgaaaac gggatctgag tttcatgtcg gtatcgttgg cttagggtca
     5521 atgggaatgg gagcagcact gtcatgtgtc cgcgcaggtc tttctacctg gggcgcagac
     5581 ctgaacagca atgcctgcgc tacgttgaaa gaggcaggtg cttgcggggt ttctgataac
     5641 gccgcgacgt ttgccgaaaa actggacgct ctgctggtgc tggtggtcaa tgcggcccag
     5701 gttaaacagg tgctgtttgg tgaaacaggc gttgcacaac atctgaaacc cggtacggca
     5761 gtaatggttt cttccactat cgctagtgct gatgcgcaag aaattgctac cgctctggct
     5821 ggattcgatc tggaaatgct ggatgcgcca gtttctggtg gtgcagtaaa agccgctaac
     5881 ggtgaaatga ctgtcatggc ctccggtagc gatattgcct ttgaacgact ggcacccgtg
     5941 ctggaagccg ttgccggaaa agtttatcgc ataagtgcag aaccg
//
LOCUS       DAJVTL010000195         5909 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.197, whole genome shotgun sequence.
ACCESSION   DAJVTL010000195 DAJVTL010000000
VERSION     DAJVTL010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5909
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.197"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..393)
                     /locus_tag="OQQ26_004059"
                     /pseudo
     CDS             complement(1..393)
                     /locus_tag="OQQ26_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151035092.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
     gene            complement(579..3890)
                     /gene="icsA"
                     /locus_tag="OQQ26_004060"
                     /gene_synonym="virG"
     CDS             complement(579..3890)
                     /gene="icsA"
                     /locus_tag="OQQ26_004060"
                     /gene_synonym="virG"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane autotransporter IcsA"
                     /protein_id="HCS1859325.1"
                     /translation="MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLL
                     LGGPIAFAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSHAS
                     RTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGMILGGSGGSGA
                     DHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGDAVTGVNLPIINKGTIS
                     GGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDN
                     LSIINNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNN
                     SLILHEGSVITGDVQVNNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVS
                     GDVSFGENSSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
                     VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKENAELTVST
                     ILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNINAGILKMGTVEAMTRTA
                     GVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVIL
                     NNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEIAGHASGITYVAVTNEG
                     GSGDKTLEGVQIISTDSSDKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMD
                     NQESKQMSNQESTQMSSRRASSQLVSSLNLGEGSSIHTWRPEAGSYIANLIAMNTMFS
                     PSLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQIGGDIL
                     KTNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKERTG
                     LYMDAWLQYGWFNNTVKGGGLTGEKYSSKGITGALEAGYIYPTIRWTAHNNIDNALYL
                     NPQVQITRHGVKANDYIEHNGTMVTSSGGNNIQAKLGLRTSLISQSCIDKETLRKFEP
                     FLEVNWKWSSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNN
                     SYRDTQGILGVKYTF"
     gene            4419..5621
                     /gene="virA"
                     /locus_tag="OQQ26_004061"
     CDS             4419..5621
                     /gene="virA"
                     /locus_tag="OQQ26_004061"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858314.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-tubulin-specific protease"
                     /protein_id="HCS1859326.1"
                     /translation="MQTSNITNHERNDSSWMSTVKSTTEVSWNKLSFCDVLLKIITFG
                     IYSPHETLAEKYSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYL
                     DGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAIN
                     CCTSIIPNDDYFHVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINE
                     LGINEFIDSKKELQMLSYNQVNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTS
                     AFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVVPKNDTAI
                     SASGGRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVS
                     FAIISPDV"
BASE COUNT         1826 a         1339 c          988 g         1756 t
ORIGIN      
        1 tcaggctgta cgcttcccca tgtgatttgc ctcgccactt caccgggctc aggaccccgt
       61 aggatcttca ccgaaaaaaa tgcatcacca gttgctttat tatttgtttt aggtagacct
      121 gttactaatt tatacctact ctgaccaagt ctggataaga aaggcacacc tgcacatttc
      181 tacttggaaa tgttttcttt taccattttg ctcaaaaatt tcaacatcca atattcctcg
      241 tacagaacta ctcaagtcct gaatagaaaa agttccagct ggtacagtag agtcatatat
      301 tactcgacct tgttgagata caacaacacg tgcattagtt tctgcaatac cagtaatctg
      361 aggcgcataa ccacgaatat ttggcggtag cattcgttca tcgctttcta atgcaattcc
      421 tgtgtaacgc caagcaacag cgcattctgg cgcatgatct ggtaaacacg tttggcattg
      481 atcgcaggca taccatcatg tgcacaaaaa cccaccgagc ttttacacgg tgggtcccag
      541 agaaatgcag gacatcaaca cgccctgcat ttttattatc agaaggtata tttcacaccc
      601 aaaatacctt gggtgtctct gtaactgtta ttacccaatt gctgagatac gtttccccag
      661 atgcttaggt tatctgcaag acgccccccc acaccagttt tgagttcaat cacattacgg
      721 ttgcctatct ggtgatttga catgccattc ataattacac catattgctt tgagctccat
      781 ttccaattca cctccaaaaa tggttcgaac ttacgaagag tctccttatc gatacaactc
      841 tgactaatta aggatgtacg caatcccaat tttgcttgaa tattattgcc cccagaggat
      901 gtgaccatag tgccattgtg ttcaatatag tcgtttgctt ttaccccatg cctagttatc
      961 tggacttgtg gattgagata caatgcgttg tcaatattat tatgagcagt ccagcgtatg
     1021 gttgggtaga tatagccagc ttccaaagct cctgttattc ctttgctgga atatttctca
     1081 ccagttaacc cacctccttt gactgtatta ttaaaccaac cgtactgcaa ccaagcatcc
     1141 atatatagac ctgttcgttc tttttcatcc tgaaaccaag aactgtacaa accggcagta
     1201 taaccgctca cagttcctcg tgaactataa ctagtatact tattatgagt tttgctatcc
     1261 tgatatccat aagctcccat aatacccaca tgcaagccat catgatcagt gaagtttgtc
     1321 ttcaaaatat ctccaccaat ctgataaacc atcctgttag ctgtggtttt taattgtcta
     1381 tcagctaaat tatgctcatt atgtccacca acagtacgaa tccacatggt ggtttcgctg
     1441 agctgacctg tagtaggatc aacaatagtg ctaccgtgtc ggtcatagag agaaggacta
     1501 aacatcgtgt tcattgctat caggttagca atataactgc cagcttcagg gcgccatgtg
     1561 tgaatactac taccttcacc caaattaagt gaagatacaa gctgtgaact agctcggcga
     1621 ctactcattt gagtagactc ttgattgctc atctgttttg attcttgatt atccatctga
     1681 ctagttagat accacttatt ggtattcagt ccagatacag tgccctgttt caggcgatag
     1741 tcataactac cagcaacaat acggcctttc tgaataaaag cattcttatc agaagaatct
     1801 gtcgaaataa tttgaacacc ttcaagagtt ttatctccag agcctccctc atttgtcact
     1861 gcaacatagg taataccaga cgcatggcct gcaatttcca gccggtcagt tttactgttg
     1921 tcattgccga gaaccgcgcc caaagataat attccgccct ttccatgcca attacctttc
     1981 tgaacatagg tctgaccgac atttgacgaa ctattattga gaataacatg accgtttttc
     2041 tccagagtca tgttacctgt gacaatgacg gggtcaggca aaaaaggggc attaatatta
     2101 ttgattagca cagtcccact atttaataaa gtgttaacag tttggttcat gcctgaaaaa
     2161 ttcaaggtag cacctttatt aacaataaca ccagcggtac gtgtcatagc ttcaactgtc
     2221 cccattttta gaatgcctgc attgatgttg gtgaaaccag agtaggtatt tttttccgcc
     2281 aaaatgagag ttccctcccc tgattttgtt agggattttc cgtcccagct atttatatta
     2341 tgatggctga gattatctgc cagaatagta ctaacagtaa gttcagcgtt ttctttcaga
     2401 ttgaactctc catgactgtc accatctgta tcattccagc tcaaaccgta gatcaattta
     2461 ttctggtcac tgatatagct ttttgtatag tcaatagcac cagtagtgag taacggattg
     2521 atgatagata tattagaaac actgaaacct gttatccctt tatctgcact tagcagttta
     2581 tagtccttct gcgcccagtt atttataata gcttccactt ttacattgtt gccaaatgac
     2641 atatttccag aagcttccag actactgatt ccagctaaat ttaaagaact gttctcacca
     2701 aaagaaacgt cacctgaaac agtgaatttg ttacctgata gtgaaacagt tgtacaatca
     2761 ccagcacata aatcaccttc aatagttggt gtggtcccag tgtaatcatt gttgataatt
     2821 ttcagaatgg atgaattgtt aacctgtaca tcaccagtaa tgacagaacc ttcatggagt
     2881 attaatgaat tgtttccacc agtgatgtgg atagcattac ctgctacatt ttgtgttcca
     2941 tcatcttctt tacctgaaat tatatatccg ctattagcaa tggtcatatt gctaccattt
     3001 atagcatccc cccaatgtcc accattaccg cctaaaatag ctccattgtt gattatagac
     3061 aggttatctc ctgtgatagc attaccaccg tagccatcat aaccataacc gtaagcagca
     3121 cctccgttgc ctccagcgaa cgtgccctta ttgattacag agaggctgct tcctgtgatg
     3181 gcatcacctc cattaccgcc atcaccctca ccataattgt tacctccatt accaccggaa
     3241 atagtccctt tgttgattat gggtagattg actcctgtga cggcatcacc tccattcccc
     3301 ccatcactat cactataact atcgccacca tgtccacctg aaataatttc tccatttatt
     3361 ataaacagat tgtctcctgt aacagcctca ccaccatcac cgttatggtc agcaccgcta
     3421 ccgccgctac caccaagaat catgccttga ttgattatag acaagtcaga tccggtaata
     3481 gagtcaccac cattaccgcc acaactatta ccatcattat tatcaccagc accaccatga
     3541 cctgcgctaa tcataatatc agagttaatc cgtagcttag ttctagatgc atgagagggg
     3601 ttggaagaag ttatatacca cgcatccatt ccatcttcac cagctcccaa gggagaaagt
     3661 ccatcaacag gtgttaataa tttttcataa ttgtcctctg aaaaatgaag ttcttgagta
     3721 cccgaaagag gaatagcaaa agctattggc cccccgagca acagggatgc accaacaaca
     3781 aaaggagaaa aagacaattt gcatgttttt tcctttaccg taggtaattc tccggccccc
     3841 ccctgtgaac attgggtcat attacaaaaa aatttgtgaa tttgattcat gcactatatt
     3901 atcagtaagt ggttgataaa cccctaaaaa gattccgttt tatccggaat aaagggacga
     3961 tatatgcaaa aacatattaa acaaagcctc aaccaaaaca tgagagctgt gttatatatc
     4021 aatgcaacgg gagaaattta cctgtgtctt gctttgaaaa aaagaggggg aaagctatat
     4081 gttcgataat aaattaataa ttttactatg atagtctgct tcagaccgca acttttcagt
     4141 tctttctgta cgcttgccca aagtttaacc actttgtttt tctatacacc caatggttct
     4201 atctgcccct tgatgttaat ccccaaagcc aataacatga atgtattcat atcacaactt
     4261 tcctaccaga ctctccaatg caataactgc ataattgttt ttagtggaaa tgtatcgttt
     4321 tcttaaagag aagaataaca ttccatttta ttatgttccc aatttaatta tattaatata
     4381 tattggcatt aataggaaaa tacatcagga gaaatcaaat gcagacatca aacataacta
     4441 accatgaaag aaatgactca tcatggatgt caactgtcaa atcaactaca gaagtaagtt
     4501 ggaataaatt gagtttttgt gacgttttac tgaaaataat aactttcggc atatattctc
     4561 cacacgaaac tttagccgaa aaatatagcg aaaaaaaact aatggatagt ttctcaccat
     4621 cactatcaca agataaaatg gacggagagt ttgcccacgc aaacatagat ggcatttcaa
     4681 tacggctatg ccttaacaaa ggcatatgtt cggtttttta tcttgatgga gataaaatac
     4741 aatccactca actttcatca aaagaatata ataacttgtt aagttcactc ccccccaaac
     4801 aattcaactt aggaaaagta catactatta cagctccggt atcagggaat tttaaaactc
     4861 acaagcctgc accagaagtt attgaaacag ccattaattg ctgtacatcg ataataccaa
     4921 acgatgatta cttccacgtt aaagacactg attttaatag tgtttggcat gatatttaca
     4981 gagatattcg agcatctgac agcaatagca caaaaatata tttcaacaat attgaaatac
     5041 cactaaaatt aattgcagat ctaattaatg agttaggaat taatgaattc attgatagca
     5101 aaaaagagct tcaaatgcta agttacaacc aagtaaataa aataatcaat tcaaacttcc
     5161 cccaacaaga cctatgtttt caaacagaaa aacttttgtt tacttcactc tttcaagacc
     5221 ctgcatttat atctgcacta acatctgcat tctggcaatc tcttcacatc acgtcttcct
     5281 ctgtggaaca catatatgcc caaattatgt ccgaaaacat agaaaacagg cttaatttca
     5341 tgcctgaaca acgagttatt aacaattgtg gacatattat aaaaatcaac gcagttgtcc
     5401 ctaaaaacga cactgcaatc tctgcctctg gggggagggc ttacgaagtt agctcatcaa
     5461 tattaccatc gcacataaca tgtaatggtg ttggtattaa taaaatagaa acaagctatc
     5521 tcgttcatgc tggaacactt ccaagcagtg aagggcttcg caatgctatc cctccagaaa
     5581 gtcgtcaagt atcatttgcc atcatatctc ctgatgttta agccaatatt atattggctg
     5641 ccagactgta aaaaaacgtt cttcagaaca gctctataaa ctattaaacc aaagctaaaa
     5701 ggatggggac caatagaatc tcagcccatc ctttttatat cattatgaac cgccccggaa
     5761 atcctggaga ctaaactccc tgagaaagag gtaaacagga tgactaaaaa tacacgtttt
     5821 tcccctgaag tccgtcaacg ggcagttcgt atggttctgg aaagtcaggg cgaatatgac
     5881 tcacaatggg cagcgatttg ttccattgc
//
LOCUS       DAJVTL010000196         5837 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.198, whole genome shotgun sequence.
ACCESSION   DAJVTL010000196 DAJVTL010000000
VERSION     DAJVTL010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5837
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.198"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(7..312)
                     /gene="ccdB"
                     /locus_tag="OQQ26_004062"
     CDS             complement(7..312)
                     /gene="ccdB"
                     /locus_tag="OQQ26_004062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858358.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin CcdB"
                     /protein_id="HCS1859327.1"
                     /translation="MQFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSD
                     KVSRELYPVVHVGDESWRMMTTDMASVPIFVIGEEVADLSHRENDIKNAINLMFWGI"
     gene            complement(314..532)
                     /gene="ccdA"
                     /locus_tag="OQQ26_004063"
     CDS             complement(314..532)
                     /gene="ccdA"
                     /locus_tag="OQQ26_004063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin CcdA"
                     /protein_id="HCS1859328.1"
                     /translation="MKQRITVTIDSDSYQLLKSANVNISGLVNTAMQKEARRLRAERW
                     QAENQQGMAEIARFIEMNGSFADENRDW"
     gene            complement(1067..2158)
                     /locus_tag="OQQ26_004064"
                     /pseudo
     CDS             complement(1067..2158)
                     /locus_tag="OQQ26_004064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            2166..2735
                     /gene="parM/stbA"
                     /locus_tag="OQQ26_004065"
                     /pseudo
     CDS             2166..2735
                     /gene="parM/stbA"
                     /locus_tag="OQQ26_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000959884.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid segregation protein ParM"
     gene            2738..3104
                     /locus_tag="OQQ26_004066"
                     /pseudo
     CDS             2738..3104
                     /locus_tag="OQQ26_004066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000361391.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid partitioning/stability family protein"
     gene            3196..3333
                     /locus_tag="OQQ26_004067"
     CDS             3196..3333
                     /locus_tag="OQQ26_004067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000766699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859329.1"
                     /translation="MKLIHGAYEKAAPIIKIGEFAMSGNNVSDGLFASPERDIAASHE
                     R"
     gene            complement(3465..3740)
                     /locus_tag="OQQ26_004068"
     CDS             complement(3465..3740)
                     /locus_tag="OQQ26_004068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HCS1859330.1"
                     /translation="MELKWTSKALSDLARLYDFLVLASKPAAARTVQSLTQAPVILLT
                     HPRMGEQLFQFEPREVRRIFTGEYEIRYELTGQTIYVLRLWHTRENR"
     gene            complement(3740..4024)
                     /locus_tag="OQQ26_004069"
     CDS             complement(3740..4024)
                     /locus_tag="OQQ26_004069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HCS1859331.1"
                     /translation="MQMKNNTAQATKVITAHVPLPMADKVDQMAARLERSRGWVIKQA
                     LSAWLAQEEERNRLTLEALDDVTSGQVIDHQAVQAWADSLSTDHPLPVPR"
     gene            4548..4727
                     /locus_tag="OQQ26_004070"
                     /pseudo
     CDS             4548..4727
                     /locus_tag="OQQ26_004070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051932.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            4777..4986
                     /locus_tag="OQQ26_004071"
                     /pseudo
     CDS             4777..4986
                     /locus_tag="OQQ26_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683482.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
     gene            complement(5086..5271)
                     /locus_tag="OQQ26_004072"
                     /pseudo
     CDS             complement(5086..5271)
                     /locus_tag="OQQ26_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            5475..>5837
                     /locus_tag="OQQ26_004073"
     CDS             5475..>5837
                     /locus_tag="OQQ26_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1859332.1"
                     /translation="MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTI
                     HTLFQRFLASGIAWPLPDSVSFAQLDAILYANRKKELTEPQIREGSWRKERRTSYSRE
                     FKVRLAKQALQPGAVVARI"
BASE COUNT         1501 a         1432 c         1369 g         1535 t
ORIGIN      
        1 tgacatttat attccccaga acatcaggtt aatggcgttt ttgatgtcat tttcgcggtg
       61 gctgagatca gccacttctt ccccgataac gaagatcggc acactggcca tatcagtggt
      121 catcatgcgc cagctttcat ccccgacatg caccaccggg taaagctcac gggagacttt
      181 atctgacagc aggcgggcac tggccagggg gatcaccatc cgtcgtccgg gcgtgtcaat
      241 aatgtcactc tgtacatcca caaacagacg ataacgactc tctcttttat aggcgtaaac
      301 cttaaactgc atttcaccag tccctgttct catcggcaaa agagccgttc atttcaataa
      361 aacgggcgat ctcagccatc ccctgctgat tttcagcctg ccagcgttcc gcacgcagac
      421 ggcgggcctc tttttgcatg gccgtattta ccaggcctga gatattcacg tttgcggatt
      481 taagtaactg atagctgtca ctgtctatag tgacagtaat acgctgcttc atgataagcc
      541 ctcaaaaaca tacttatgat atgtatatga gtatatatta atggtacaaa ccatcaatat
      601 ccataaaaag tacaccatta attcgctata agtttttaat acaatttttt ctgctgcgat
      661 tttttatacg ataattagca tacttataac accgtaagta aattacatga aagcaggcac
      721 agcgtgatcc gatttttctg cgtataacga ttttccggaa gtgtaatacg gttgcgcccc
      781 gggccgggca cccttttctg ttgttgtgta cgggcccaca gagaatggta ccggaggcgg
      841 gctcagaagt actgagtcgg gtgatcgcgt caggccgcga agtactgaca cgggtattgg
      901 tgactggtga tgaagtactg ccccgggtat gatttcaggc tgattcaggt tctgattctc
      961 tgtcagtccg cgtggttgct ggcctggctg atttcctgtt gtcaggcgtt caacaaccga
     1021 ctgcaggtta tagcccggtt cacgaacacc tgacggcagg tatcactcac ccggtgaagg
     1081 taaatccctc aagaggcagc aactctgcca gtcgctcctc cggccattcc ggcagacgcg
     1141 tcaggacgtc cgtcagccag gcatgtggct ccagaccatt acgttttgct gtttccagaa
     1201 ggctcattat ctgtgccgcc cggtttccgg ccatcagtga accggcgaac agccacgctt
     1261 tccgtcccat aacaaccggg cgaatggcac gctcgcagat attgttgtcc aggggcaccg
     1321 ctccgtcacc caggaagcag ctcagttcat cgcgccggtt cagaatatag ttaatcgcct
     1381 tatttaatgg cccgtcgggc ggacagcacg gctcctgctc ttcaagccag gcaaacaggt
     1441 cattcactat cggccgggag taccgttatc gccactgccg tattttttcc acagggcgct
     1501 cacggatgag tttctcaatg cggtaaagac ccgcgatttt tctcagctcc acgcctgcac
     1561 ggggctccct gctggcctta tacagatttg cgaagccgcg ccctgcgtga ctccagcaac
     1621 aggctgatgt gatgccgggg tgattatccg ccagagattt gtacacgctg tatccgtcac
     1681 tcaccagcgt accgccacac cagcactgca gccaggtctc agggtatctg agggcccgtc
     1741 cggtctgcga gtcaaaacag acgaccggcg gaccgcttct ttcaccgctg acgtaagcac
     1801 acagccagcc ggagcaggat ttaccgcctt tccgggtatc aaggagcctc agggacgttt
     1861 catctgcatg aataacatcc cgtgtcagaa gctcatggcg tagcagtttc gccagcgggg
     1921 ccagtgcagc tccggcaaca ccgaccatat ccgccattgt actgacgggg agctccacac
     1981 ccattcggga gaaaatgtgc tgctggcgat acaggggcag atggtcggta tatttgctga
     2041 tgacaacctg tgcaattacc gacgactcaa cagcactttc agggaggata tgcgccggca
     2101 ttttcccgct gaacactttc tcacagcagg gacagctgta ctgcggacgg atatagcgga
     2161 ttgcattaaa tggtggggat acattcacaa taaaagatgt aaaagtcatg cctgaatcta
     2221 taccggcagg ttatgaagtt ctacaagaac tggatgagtt agattcttta ttaattatag
     2281 atctcggggg caccacatta gatatttctc aggtaatggg gaaattatca gggatcagta
     2341 aaatatacgg agactcatct cttggtgtat ctctggtcac atctgcagta aaagataccc
     2401 tttctcttgc gagaacaaaa ggaagtagct atcttgctga cgatataatt attcacaaaa
     2461 aagataacaa ctatctgaag caacgaatta atgatgagaa caaaatatca atagtcaccg
     2521 aagcaatgaa tgaagcactt cgtaaacttg agcaacgcgt attaaatacg ctcaatgaat
     2581 tttctggtta tacgcatgtt atggttatag gcggtggcgc agaattaata tgcgatacag
     2641 taaaaaaaaa cacacagatt cgtaatgaac gttttttcaa aaccaataac tctcaatatg
     2701 atttagttaa cggtatgtat ctcataggta attaataatg gacaagcgca gaaccattgc
     2761 ctccaaacta aatccagatg taaatcaaac agataaaatt atttgtgata cactgaacag
     2821 tatcccgcaa ggggaacgca gccgccttaa ccgggccgca ctgacggcag atctggcctt
     2881 atacagacaa gatccccggc cccccatttc ttttatgtga actgctgacg aaagaaacca
     2941 cattttcgga tatcgtgaat atattgagat cgctatttcc aaaagagatg gtcgatttta
     3001 attcttcaac aatcactcaa tcctcttcac aaaaagagca aaaaagtgat aaagagcccc
     3061 aaaagaacgt gatgaagcta ataaaccaat tcaattatta ttgagtttcc tttatccact
     3121 atcaggctgg ataaaggaaa cttaatcaag ttattttctt gccaatcatt acataaaata
     3181 aacagggtcg ttattatgaa attaatccac ggtgcttatg aaaaagcggc tccaataatc
     3241 aaaattggtg agttcgcaat gtctggcaat aacgtttctg atgggttatt tgccagcccg
     3301 gagcgcgata ttgccgccag tcacgagcgg taattttcgt tatttcatcg taatttattt
     3361 tatctcctac aagattattt aatggaatgc aaaatatctg gcctgataac aatgctccag
     3421 aattaatacc tgcaggctat gttaaagttg cctccacacc caatctacct gttctctcgt
     3481 gtgtgccaca ggcgcaatac ataaatagtc tggccagtaa gttcgtaacg gatttcgtac
     3541 tcgccagtaa aaatccgtct gacctccctg ggttcaaact gaaacaactg ttctcccata
     3601 cgtggatgag ttaacagaat gaccggcgcc tgtgtcaggg actgcaccgt tctggcggca
     3661 gcaggtttac tggccagcac cagaaaatca tataaccgcg ccaaatcaga aagtgcctta
     3721 ctggtccact tcagttccat cagcgtggca ccggtaacgg atggtcagta ctgaggctgt
     3781 ccgcccaggc ctgtacagcc tgatggtcga taacctgtcc ggatgtcaca tcgtccaggg
     3841 cttccagcgt caggcgatta cgctcctcct cttgggcaag ccatgcagaa agcgcctgtt
     3901 tgataaccca gccccgggag cgttccagtc tggcggccat ctggtcgact ttatcagcca
     3961 taggtaatgg cacatgcgcg gtaattactt ttgttgcttg tgcggtattg tttttcattt
     4021 gcatacccga ttagttgtta atcatattta atcatagtga ttactttcag acggaacaag
     4081 gcaaataatg cgagtcagcg catataaggc ggcatacggt ggttacatgt agcacaggtg
     4141 taaaaccgcc gaggcccggc gcaagccggt acggtcgtcc gaatatcacc agtccccctc
     4201 cggctctgcg aggccatgcg gcctgtcagc gatgaaaatg cctctgtgcg cggtcggagt
     4261 ggtcccgaca agggtttacc cgcagtcggg gcgtatctcc gcgttagcgg gccgtgaggg
     4321 ccgcttacga gcgtgtatga gagacgtaca gtagttttgt ccgctcacac cagtacaaac
     4381 cagtcgaaat accggtaacg acgattactc ttgtctctga tgccggtgga ctacgagatt
     4441 ttatttactg gcgtcctgat gcggtcagga ctggtatgga acctgtttat gtgatactta
     4501 atgctcttct ggattccggg cgatttacgc gtaaacttat tctgttaggg ctgtcaggca
     4561 cattttccta tatcttcggc tcaattgttg cgacactggg aatgggactt gttgtcgatt
     4621 atctgggatg gggggccaca tttatcgtac tgatactgtc tgctgttttt gccatcattt
     4681 tcacactgat gagtcgtgaa cgctcactgg agttcgaaaa agagtaattt tttcaggaaa
     4741 aacataaaat tactgactaa atatttattt tttgaatcgc agggcattcc ggataaggtt
     4801 gatatcgtgt cacggctgaa gacctatgga tacagtattt ctggtgtgga gacggatgac
     4861 ggatataagg cgcttgtccg cgcttttcag cttcatttcc ggcagaaaaa ttatgacggc
     4921 ataatggatg ctgaaaccgc tgccatcctg tatgcattgc tggagaagta tttcccgggt
     4981 aaataaggag tgagtcgtca gagctgcgat atatctcctt cctccatggg ctgtctctta
     5041 tacacaaatc cccacccggg gatttgtgat gtcagatgtc ccctgtaaaa ctatgttttc
     5101 attgcgctct atgaagctga gtgagcgtaa cgactggagc tgcttctgcg gtgctccggt
     5161 ggcgaacgtg aagtcatact cttcgaacat tttcaccgcc gggaaggcta ccattcgggt
     5221 atacatcgcc tgtttacgtt gatgacgtgc cagtttttct tcatgaagca tgatgcttca
     5281 agaagggcac tgttgcaaag ttatcgatga ggtagctgac catcactgct gtcggaatcg
     5341 atcttgccct tctgtttcca gtcgcctcag caaactattt ttcagttacc acgtaagcgc
     5401 cccatcagcg acgtcttgtg aaaattgtcc tgtctggcaa caatcgcgcc catctatatt
     5461 gatggacacg aacgatgaat tcccagacaa caaaagatat tccctgcttc cgttcttatt
     5521 tgcctgatgc cctgcgttta agatttgaag ataaactgac catccgggcc atcgctcagc
     5581 gtctgggtct cagtcattcc acaatacata cgctttttca gcgatttctt gcatccggta
     5641 tcgcatggcc attgcccgat tcagtttcat tcgctcaact tgacgccatc ctttatgcca
     5701 acagaaagaa ggaattaaca gagcctcaaa tcagagaagg ctcatggcga aaagaacggc
     5761 gaaccagcta tagccgtgaa tttaaggtcc gtctggctaa gcaggcgtta cagcctgggg
     5821 ctgttgttgc ccggatc
//
LOCUS       DAJVTL010000197         5814 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.199, whole genome shotgun sequence.
ACCESSION   DAJVTL010000197 DAJVTL010000000
VERSION     DAJVTL010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5814
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.199"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            20..916
                     /gene="aaeA"
                     /locus_tag="OQQ26_004074"
     CDS             20..916
                     /gene="aaeA"
                     /locus_tag="OQQ26_004074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
                     /protein_id="HCS1859333.1"
                     /translation="MTVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSG
                     LITQVNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRL
                     GVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYT
                     GEFITRGSTAVALVKQNSFYVLAYMEETKLEGGRPGYRAEITPLGSNKVLKGTVDSVA
                     AGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGK
                     QDRDESQDSFFRKMAHRLREFG"
     gene            922..2889
                     /gene="aaeB"
                     /locus_tag="OQQ26_004075"
     CDS             922..2889
                     /gene="aaeB"
                     /locus_tag="OQQ26_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HCS1859334.1"
                     /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
                     IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
                     AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
                     IMADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQ
                     GMRSNLNMESSRWARANRRLKAINTLSLTLIIQSCETYLIQNTRPELITDTFREFFDT
                     PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
                     EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
                     LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
                     VQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
                     DRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
                     IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
                     LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
     gene            2981..3253
                     /locus_tag="OQQ26_004076"
                     /pseudo
     CDS             2981..3253
                     /locus_tag="OQQ26_004076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312139.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3309..3572)
                     /gene="yhcN"
                     /locus_tag="OQQ26_004077"
     CDS             complement(3309..3572)
                     /gene="yhcN"
                     /locus_tag="OQQ26_004077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417705.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HCS1859335.1"
                     /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG
                     VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK"
     gene            complement(3937..4407)
                     /gene="argR"
                     /locus_tag="OQQ26_004078"
     CDS             complement(3937..4407)
                     /gene="argR"
                     /locus_tag="OQQ26_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HCS1859336.1"
                     /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
     gene            4842..5780
                     /gene="mdh"
                     /locus_tag="OQQ26_004079"
     CDS             4842..5780
                     /gene="mdh"
                     /locus_tag="OQQ26_004079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HCS1859337.1"
                     /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKQPGEVEVPVIGGHSGVTILPLLSQVLGVSFTEQEVADLTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK"
BASE COUNT         1434 a         1341 c         1524 g         1515 t
ORIGIN      
        1 aaaattctcc cgtacggcca tcacggtcgt attagtcatt ctggccttca tcgcaatttt
       61 taatgcctgg gtctattaca ccgaatcccc ctggacgcgt gacgcgcgct ttagcgctga
      121 cgtcgttgcg atcgcgccgg acgtttctgg actcattacc caggtgaatg ttcatgataa
      181 ccagctggtg aaaaaaggac aggtactgtt caccatcgac cagccgcgct atcaaaaggc
      241 gcttgaggaa gcgcaagccg atgttgctta ttatcaggta ctggcacagg agaaacgcca
      301 ggaggccgga cgtcgtaacc gtctcggtgt gcaggcgatg tctcgcgaag agatcgacca
      361 ggctaacaac gtactacaaa cggttctgca tcagttagcg aaagcgcagg cgacccgcga
      421 tctggcaaaa ctggatcttg aacgcacggt gatccgcgcg ccagcagatg gctgggtgac
      481 caacctcaac gtctataccg gtgagtttat tactcgagga tcaacggcgg ttgcgctggt
      541 gaaacagaac tccttctatg tactggccta tatggaagaa actaagctgg aaggggggcg
      601 tccggggtat cgtgcagaga tcacgccgct tggcagtaac aaagtgctga aagggactgt
      661 tgatagtgtt gccgcagggg tcaccaacgc cagcagcacg cgtgacgaca aagggatggc
      721 gactatagac tctaaccttg aatgggtgcg tcttgcgcaa cgtgttccgg ttcgtattcg
      781 tctcgacaac cagcaagaga acatctggcc tgcgggcacc actgctacag tggtggtcac
      841 tggcaaacaa gatcgcgacg aaagccagga ttcgttcttc cgtaaaatgg cccatcgcct
      901 gcgtgagttt ggttaatcac gatgggtatt ttctccattg ctaatcaaca tattcgcttt
      961 gcggtaaaac tggcgactgc cattgtactg gcgctgtttg ttggctttca cttccagctg
     1021 gaaacgccac gctgggcggt actgacagcg gcgattgttg ccgctggtcc ggcctttgct
     1081 gcgggaggtg aaccgtattc tggcgctatt cgttatcgcg gctttttgcg catcatcggc
     1141 acatttattg gctgtattgc cggactggtg atcatcattg cgatgatccg cgcaccatta
     1201 ttgatgattc tggtgtgctg tatctgggcc ggtttttgta cctggatatc ctcgctggta
     1261 cgaatagaaa actcgtacgc gtgggggctg gccggttata ccgcgctgat cattgtgatc
     1321 accattcagc cggaaccatt gcttacgccg cagtttgccg tcgaacgttg tagcgagatc
     1381 gttatcggta ttgtgtgtgc gattatggcg gatttgctct tttctccgcg atcgatcaaa
     1441 caagaagtgg atcgagagct ggaaagtttg ctggtcgcgc aatatcaatt aatgcaactc
     1501 tgtatcaagc atggcgatgg tgaagttgtc gataaagcct ggggcgacct ggtgcgacgc
     1561 accacggcac tacaaggcat gcgcagcaac ctgaatatgg aatcttcccg ctgggcgcgg
     1621 gccaatcgac gtttaaaagc gatcaatacg ctatcgctga cgctgattat ccaatcctgc
     1681 gaaacttatc ttattcagaa tacgcgcccg gaattgatca ctgatacttt ccgcgaattt
     1741 tttgacacgc cggtagaaac cgcgcaggac gtccacaagc agctcaaacg cctgcggaga
     1801 gttatcgcct ggaccgggga acgggaaacg cctgtcacca tttatagctg ggtcgcggcg
     1861 gcaacgcgtt atcagcttct caagcgcggc gttatcagta acacaaaaat caacgccacc
     1921 gaagaagaga tcctgcaagg cgaaccggaa gtcaaagtag agtcagccga acgtcatcat
     1981 gcaatggtta acttctggcg aaccacactt tcctgcattc tgggcacgct tttctggctg
     2041 tggacgggct ggacttccgg cagtggtgca atggtgatga ttgcggtagt gacgtcactg
     2101 gcaatgcgtt tgccgaatcc acgtatggtg gcgatcgact ttatctacgg gacgctggcc
     2161 gcgctgccat tagggctgct ctactttttg gtgattatcc ctaataccca acaaagcatg
     2221 ttattgctgt gtattagcct ggcagtgctg ggatttttcc tcggtataga agtacagaaa
     2281 cggcgactgg gctcgatggg ggcgctggcc agcaccataa atattatcgt gctggataac
     2341 ccgatgactt tccatttcag tcagtttctc gacagcgcat tagggcaaat cgtcggctgt
     2401 gtgctcgcgt tcaccgttat tttgcttgtg cgggataaat cgcgcgacag gaccggacgt
     2461 gtactgctta atcagtttgt ttctgccgct gtttccgcga tgactaccaa tgtggcacgt
     2521 cgtaaagaga accacctccc ggcactttat cagcagctgt ttttgctgat gaataagttc
     2581 ccaggggatt tgccgaaatt tcgcctggcg ctgacgatga ttatcgcgca ccagcgcctg
     2641 cgtgatgcgc cgatcccggt taacgaggat ttatcggcgt ttcaccgaca aatgcgccgc
     2701 acagcagacc atgtgatatc tgcccgtagc gatgataaac gtcgtcggta ctttggccag
     2761 ttgctggaag aactggaaat ctaccaggaa aagctacgca tctggcaagc gccaccgcag
     2821 gtgactgaac cggttcatcg gctggcgggg atgctccata agtatcaaca tgcgttgacc
     2881 gatagttaag tcaaaaccga cgccaaaagc gtcggttttt tcatggctat acttagcgat
     2941 gcacggcaga actcgccgcg aaacgtgacg gtggcaacag atgaatattt atacctttga
     3001 ttttgatgag attgagagtc aggaggattt ttatcgtgac tttagctaaa cctttggtct
     3061 ggctaaagat aaggtacgcg atctcgactc actatgggat gtgttaatga acgatgtcct
     3121 gccgctacca cttgagattg aatttgttca tctgggagag aaaacgcgtt gccgttttgg
     3181 cgcgttaata ttgctgtttg atgaggcaga ggaagagctg gaagggcatt tgcgttttaa
     3241 tgttcgtcat tagcgcaaaa aaaagccccc gaaccggggg caatatcgtc ggacaagacg
     3301 atgagggttt atttgtacag ttcagccgta gcgtgccagg tgtcaccgct acgagcttca
     3361 gtaatctggt aggccgttgc gcctttctct tccgcttttt tgttcagcat ttcacgcata
     3421 tccattggcg aagacgccac accacttacg gatacggtcc cgattgcttc acgattttgt
     3481 gcttgtgcag catcaatgga gtcggcagcg aatgcaccga aagagagaac agaaagtacg
     3541 cttaatgcag ctacagtggt tttgattttc atgattttta cctcgacata atcttttagc
     3601 tgggcctttg tttcgtgacc catatcacaa aatcaagtat acactaatta ttgagataat
     3661 taataccacg ctaactgttt cagttgatac taagtgttaa aaatgtgaat tttaataaca
     3721 aaaaagtata aaaaacacgg ttatttatta ttaataatag tattttcaat tagataatga
     3781 attttgcata atgtgctttt tttaccgtat gtattcattt tgtgaatgat gtgtcgcggt
     3841 aaaacgcact attcgttaaa tgtatcgcag gagaaagaag gggaatgaga gggataagca
     3901 acattttccc cgccgccaga agcgacgggg cagagattaa agctcctggt cgaacagctc
     3961 taaaatcgct tcgtacaggt ctttgacggt gaaaccgtta gcaggggtgg taaagatggt
     4021 gtcatcgcca gcgatggtgc ccagaatacc ttctgctttg cccagtgagt ccagcaggcg
     4081 agcaattaac tgcgccgcgc cagggctggt atgaatcacg acaactgcat cgttgtagtc
     4141 gatatccagc accagattct tcaatggact ggaggtggtt ggtacaccca gttcagctgg
     4201 caggcagtaa accatttcca ttttggcatt gcgtgtacgt acagcaccaa acttggtcaa
     4261 catccgcgag actttagact gattaatatt gtcaaagcct tgctcctgca acgcggcgac
     4321 gatttcgccc tgggagctaa atttctcttc tttaagtaat gctttaaatg ctttaactag
     4381 ttcttcttgc ttagccgagc ttcgcataag tcacccgata tggtggttga tacaacatta
     4441 ttgtgcatac agatgaattt ttatgcaaac agtcagccct gaagaaggct gaaataatgt
     4501 tatgaaagag cgggatttta tcaaatttcg ttattgagaa acatgcctgc gtcacggcat
     4561 gcaaattctg tttaaaagta aattaattgt tatcaaattg atgttgtttt ggctgaacgg
     4621 tagggtatat tgtcaccacc tgttggaatg ttgcgctaat gcataagcga ctgttaatta
     4681 cgtaagttag gttcctgatt acggcaatta aatgcataaa cgctaaactt gcgtgactac
     4741 acattcttga gatgtggtca ttgtaaacgg caattttgtg gattaaggtc gcggcagcgg
     4801 agcaacatat cttagtttat caatataata aggagtttag gatgaaagtc gcagtcctcg
     4861 gcgctgctgg cggtattggc caggcgcttg cactactgtt aaaaacccaa ctgccttcag
     4921 gttcagaact ctctctgtat gatatcgctc cagtgactcc cggtgtggcc gtcgatctga
     4981 gccatatccc tactgctgtg aaaatcaaag gtttttctgg tgaagatgcg actccggcgc
     5041 tggaaggcgc agatgtcgtt cttatctctg caggcgtagc gcgtaaaccg ggtatggatc
     5101 gttccgacct gtttaacgtt aacgccggca tcgtgaaaaa cctggtacag caagttgcga
     5161 aaacctgccc gaaagcgtgc attggtatta tcactaaccc ggttaacacc acagttgcaa
     5221 ttgctgctga agtgctgaaa aaagccggtg tttatgacaa aaacaaactg ttcggcgtta
     5281 ccacgctgga tatcattcgt tccaacacct ttgttgcgga actgaaaggc aaacagccag
     5341 gcgaagttga agtgccggtt attggcggtc actctggtgt taccattctg ccgctgctgt
     5401 cacaggttct tggcgttagt tttaccgagc aggaagtggc tgatctgacc aaacgtatcc
     5461 agaacgcggg tactgaggtg gttgaagcga aagccggtgg cgggtctgca accctgtcta
     5521 tgggccaggc agctgcacgt tttggtctgt ctctggttcg tgcactgcag ggcgaacaag
     5581 gcgttgtcga atgtgcctac gttgaaggcg acggtcagta cgcccgtttc ttctctcaac
     5641 cgctgctgct gggtaaaaac ggcgtggaag agcgtaaatc tatcggtacc ctgagcgcat
     5701 ttgaacagaa cgcgctggaa ggtatgctgg atacgctcaa gaaagatatc gccctgggcg
     5761 aagagttcgt taataagtaa ttgattagcg aataataaaa aaccggagca caga
//
LOCUS       DAJVTL010000198         5796 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.200, whole genome shotgun sequence.
ACCESSION   DAJVTL010000198 DAJVTL010000000
VERSION     DAJVTL010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5796
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.200"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..1623)
                     /locus_tag="OQQ26_004080"
                     /pseudo
     CDS             complement(1..1623)
                     /locus_tag="OQQ26_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415433.4"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
     gene            complement(1829..2113)
                     /gene="ihfB"
                     /locus_tag="OQQ26_004081"
     CDS             complement(1829..2113)
                     /gene="ihfB"
                     /locus_tag="OQQ26_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HCS1859338.1"
                     /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            complement(2273..3946)
                     /gene="rpsA"
                     /locus_tag="OQQ26_004082"
     CDS             complement(2273..3946)
                     /gene="rpsA"
                     /locus_tag="OQQ26_004082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HCS1859339.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            complement(4057..4740)
                     /gene="cmk"
                     /locus_tag="OQQ26_004083"
     CDS             complement(4057..4740)
                     /gene="cmk"
                     /locus_tag="OQQ26_004083"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HCS1859340.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
                     VAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ
                     YARQKLALA"
     gene            complement(4913..5677)
                     /gene="ycaL"
                     /locus_tag="OQQ26_004084"
     CDS             complement(4913..5677)
                     /gene="ycaL"
                     /locus_tag="OQQ26_004084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706828.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase YcaL"
                     /protein_id="HCS1859341.1"
                     /translation="MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATL
                     SDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSD
                     VNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDA
                     ISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSV
                     EKLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK"
BASE COUNT         1470 a         1532 c         1361 g         1433 t
ORIGIN      
        1 agccagggga taatcagttg ttgcccacta tccccttcag gccagtcctg tgtcatagag
       61 aatcgctttg ccgtttctgg ctatcaccat tgccagccct tgcccgacat caagcatgta
      121 cacttgccac tcgtcaggtc gaggtttttg ccacagcggc cagcacatca gcaagcctac
      181 agccacacac attgctggca acgttcgcca ggcgtttaat cgccatacca ccagtaagaa
      241 ccatggggaa aatgatagcc attgccaacg ttcagcaatg ttgatccacc cttctggcaa
      301 actctttaac ccccagaaaa gtaaagccaa agaccggtcg gcaagaaacc ataacccttg
      361 ctccaggatt aacggcccgc ttaaatgcac aaccatcgcg gcgaggatca acggaaccgt
      421 gataaatgtc accaagggaa ttgctaatag atttgcaata aacgaggtca gactaatgcc
      481 atgaaatatg acgatttgca cgggcataag cagaagtgtg atacccagtt gcagatggat
      541 gagggaaaca actgcacgca ataccggcgg cagttgccac tcaggacagg gaaaccactg
      601 ataccaaaaa atcagtgccg cgaccgcagc ggcagagagc cataaacttt gcgagagaat
      661 ggcaacagga tccatcagca aaattgcagc cagacaacat atccatacat cccagccact
      721 ccactgtcgc ccacttaact taagcattcc ccacgtagca agcgccacca cggtacgcaa
      781 tgcaggaggt tgcattcccg tcaaccaggc ataaaaagca gcacagcaga tcccaccaat
      841 taatggtatt tgccagtgga tccagcgccc aggcagaaaa atttgtccac tgcgaatgag
      901 tccggcagcc agcaacgccg caaaagcgat gtgcaatccc gatatcgcca ttaaatgcgc
      961 cgttccagta tcgcgcatga tatttttgat ttctttgggg acagataacc gttcccccat
     1021 acctaaacca agaataaccg cattccacgg atagggttgc agcgttgttt gtaatgacgc
     1081 cagatactgt gcacgcaagc tacaattcgg ttcaatgaca cttgcctgca gaaaacggcc
     1141 ggtgagcggt tgatgctggg caatggcata acgctggcta tcaaagccgc catcattaag
     1201 ttgaccatga accgcacgaa ctttgagttt cattgaccat tgttgtccag cacaaaccgc
     1261 ttgcggaaga tattcgccat aaagcacgag gcctggcgca gggaatatac gtcgaccttg
     1321 tagatgagtg atttgaccgt aatgagtggt catgccgtca gtagtagtga tctcaacaat
     1381 tgcatcctgc gtcgcaccag ttaaggtttc tcctgcccac aaaatttgct ttgccgctaa
     1441 tataccccaa acgaaaaaca gcaacgtcag cgcgatataa cgtacggttt taacagggat
     1501 aaatgccagt acgcaggcga agagagtcag aaacgcaagg gttaatgtcc caggcaattg
     1561 gggcaaaatc agcaacggaa aaattccgca aattatgcat acgccgactg tcgttatttt
     1621 catgccccct ccctgtttat ggaaagtgtg caactttgtt gagcggttgt ctggtgggaa
     1681 ttttgcgttc cccgaggcac gttcagaaga atttaacgag agggtgaaaa ctgctcaaaa
     1741 ctctgcgaag cagcttccag ttccagatta gagaaatgaa aaaagcaccc gacaggtgct
     1801 tttctctcgt tcaagtttga gtaaaaactt aaccgtaaat attggcgcga tcgcgcagtt
     1861 ctttaccagg tttaaagtga ggaacgtatt ttccttccag ttctacttta tcgccagtct
     1921 tcggattacg tccggtacgt ggtgcgcggt agtgcaaaga gaaactgccg aaaccgcgga
     1981 tttcaatacg ctcgccctgc gcaagagtcg aggccatatg ctccagcatc tcttttactg
     2041 catcttcaac cgtcttggcg ggaatgtgcg attgctgggt ggcaagtctt tctatcaatt
     2101 ctgacttggt catgattcct ccggttcctt aaaggcaaat taagcggctg ctgttgctgc
     2161 attgattaag ggcggccgta gccgccctta gtgcttgatt acaggacgaa acctgcaatc
     2221 tgtcaagtaa actcaacaaa cttcgtaata aaaatcccga agagtcagag aattactcgc
     2281 ctttagctgc tttgaaagct tcagccattg cgttgttgga gaagtttgca tcttcctgtt
     2341 tgttaacagt tgcgattgca tctttctcgt cagcttcgtc tttcgcacga acagacaggc
     2401 tgattgcgcg gtttttacga tcaacgccgg tgaatttagc ttcaacttcg tcgccaacgc
     2461 tcagaaccaa ggtagcgtct tcaacgcggt cacgggatgc ttcagaagca cgcaggtaac
     2521 cttcaacgcc gtcagccagt tctacggttg cgcctttagc gtcaactgca gttactttac
     2581 cggttacgat agcgcctttc ttgttcagag caacccagtt gttgaacgga tcttctgcga
     2641 gctgtttaac gcccaaggag atacgttcac gttctgcgtc aacctgcaga acaactgcag
     2701 cgatttcgtc gccttttttg tattcacgaa ctgcttcttc gcctgcaacg ttccaggaga
     2761 tgtcagacag gtgaaccagg ccgtcgatgc cgccgtccag gccgatgaag ataccgaagt
     2821 cagtgataga cttgatttta ccttctacac ggtcgccctt gttgtgggtt tccgcgaact
     2881 gctgccacgg gttagctttg cactgtttca gacccaggga gatacgacga cgttcttcgt
     2941 cgatatccag aaccataact tccactacat cgccaacgtt aacaactttg gacgggtgga
     3001 tgtttttgtt ggtccaatcc atttcggaaa cgtgtaccag accttcaacg ccttcttcga
     3061 tttcaacgaa gcagccgtag tcagtcaggt tggtcacgcg accagtcagt ttggtacctt
     3121 ccggataacg tttagcgata gctacccacg gatcttcgcc cagctgtttc aggcccaggg
     3181 atacacgggt acgttcgcgg tcgaacttca gcactttaac agtgatttcg tcgcccacgt
     3241 tgacgatttc gctcggatgc ttaacgcgtt tccaggccat gtcagtgatg tgcagcaggc
     3301 cgtcaacgcc gcccagatca acgaatgcac cgtagtcagt gaggttctta acgatacctt
     3361 taacttccat gccttcctgc aggttttcca gcagctgatc gcgctctgcg ctgttttcgg
     3421 attcgataac ggcacgacga gaaacaacaa cgttgttgcg cttctgatcc agcttgatta
     3481 ctttgaattc aagctctttg ccttccaggt gcagagtgtc acgcaccgga cgaacgtcta
     3541 ccagagaacc tggcaggaac gcacgaatac cgttcagctc aacagtgaag ccgcccttaa
     3601 ctttgccgtt gataacaccg gtaacagttt cagcatcttc gtaagctttt tccagcgtga
     3661 tccaggcttc gtgacgttta gctttctcac gggacagcag agtttcaccg aagccgtctt
     3721 ctactgcgtc cagagcaacg tcaacttcgt cacctacctg gatttccagc tcgccctggg
     3781 cgtttttgaa ctgctcagcc gggatggcgg actcagattt cagaccagcg tcaaccagta
     3841 ctacgtcttt gtcgatagca acaacaacgc cacgaacgat agaacccggg cgggtttcga
     3901 tttcttttaa ggactcttca aagagttgag caaaagattc agtcatgttt aatcttcagg
     3961 tttatattta acgtccacct ggctccatgc cggatggggt tgtttaacat acccgctgtc
     4021 attccattgc aacgggggta ctgcaaattc ggtcgcttat gcgagagcca atttctggcg
     4081 cgcgtattgt agcgcttttt caatcacttg ctcaatgctt aaggtggtgg aatccaacac
     4141 taaagcatcg gctgccggaa ccagtggcgc taccgctcgg ttacgatcgc ggtcgtcgcg
     4201 ttctttgatc tcggccaaaa ggcgctcaaa gttaacacta aagcccttct cctgcaactg
     4261 tagcatgcgg cgatgcgcac gttcttccga ggaggcgtca aggaaaattt tcactggcgc
     4321 atcagggaat accaccgttc ccatgtcgcg gccatcggca atcaggcctg gtaattcgcg
     4381 aaacgcgcgt tggcgacgca ataatgcttc gcgaacgcgt gggaatgccg cgacttgtga
     4441 agcagcattc gccacttcct gagtacgaat ttcgccgctg acatcttccc cttcgaggat
     4501 cacttccaga ttgccattgg tcgacacaaa acgtacatcc agatgggatg ccagcggcac
     4561 cagcgcatct tccgacgcaa catcaacatg gtgatgtaaa gccgccagtg ccagtacgcg
     4621 ataaattgca cccgagtcca gcagatgcca ttgcaacgct tccgccatag ccttacacaa
     4681 ggtgcctttc cctgcaccgc ttgggccatc aatggtaata accggggcaa ttgccgtcat
     4741 ctttatctcc ttaaaacagg cgtaccgtta acataaccgc gcgcattata cgcgccgacg
     4801 ccacaaatcg ttaacgttgt gtgcaaaaac cagttttgtc tgtattcaga tggggattta
     4861 ttgcgcaatt atagcgggct ggcagaagac cagcccgaaa gatgacaatg atttacttac
     4921 cagaggcgat acgatcacgg atgtgttgcg cacgctctgt tgatggtggg tgagagtcaa
     4981 acatggactg ggtgcgaccg ccatccagac tagccagttt ttcaacgctg ccaaccagcc
     5041 cctgggtgct gatgccacgt ttcttcaaca gatcaaagga gaaatcatct gcttcggact
     5101 ctttatcacg ggagtattta gcattaatag cgccttctgc gatatcaccc aattgtgagc
     5161 gggaaagctg ggaagccaca ccgctggtag ctgaaatggc atcgcgtgcg gcaacgatcg
     5221 cataagaagc tttcatttca gccagcgagt gacccaacgc gacgtggccc agttcatggc
     5281 ccagaacacc ttcaatttcg ttgtcattca tcatgtccat caggccactg tagacacgaa
     5341 cacagccgtt cgccatcgcc catgcgttga cgtcgctggt catataaacc ttatagttga
     5401 ccggcgtgcc attaatattg ttacccaatg ctttggcgat ttttgccaga cgtttaccgt
     5461 acttgctgga tttacttgcg acttgattgc cgctgtccat ttcggcacag ccctgattgg
     5521 caatcgcttt tgcatcggca tcgcttaatg ttgctgcttt ataggcattt aaaccggagc
     5581 tgatagccat attggtatca ataccgtggg tattttgaca ccctgtcagt aatgctgcag
     5641 aggtcgcaat cgccagcagt aatttagtat tcttcatgtg aatcatccgt tgattaatca
     5701 tatataaata tgatgtatca acaacttaca ttgacaagcg acgctaccat taatcaaaat
     5761 gactcacaag gtccgaaaaa aaacgccgac aatgtg
//
LOCUS       DAJVTL010000199         5705 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.201, whole genome shotgun sequence.
ACCESSION   DAJVTL010000199 DAJVTL010000000
VERSION     DAJVTL010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5705
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.201"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            92..1006
                     /locus_tag="OQQ26_004085"
     CDS             92..1006
                     /locus_tag="OQQ26_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HCS1859342.1"
                     /translation="MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYV
                     NLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQSSAFAGSLQSYKGSLYWNS
                     VTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATL
                     GSGNPRNFTWNIISNNSVVMPTGCCTVDSRNVTVNLPDFPGSAEIPLGVYCSSEQKLS
                     FYLSGATTDSARQVFANTAPDATKASGVGVSLMRNGKILATGENISLGTVNKSKVPLG
                     LNATYGQTGNKVSAGTVQSVIGVTFIYE"
     gene            1340..3619
                     /gene="ydeP"
                     /locus_tag="OQQ26_004086"
     CDS             1340..3619
                     /gene="ydeP"
                     /locus_tag="OQQ26_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance putative oxidoreductase YdeP"
                     /protein_id="HCS1859343.1"
                     /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP
                     EGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLAWGDHE
                     LEAAGRLTQPLKYDAVSDCYRPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
                     FLYQLFAREYGSNNFPDCSNMCHEPTSVGLASSIGVGKGTVLLEDFEKCDLVICIGHN
                     PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
                     NVRIGGDMALLKGMMRLLIEHDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
                     KDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
                     GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQA
                     ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
                     VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS
                     VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
                     ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
                     ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
                     PLSGIPGYKSIPVELEPSN"
     gene            3867..4064
                     /gene="safA"
                     /locus_tag="OQQ26_004087"
     CDS             3867..4064
                     /gene="safA"
                     /locus_tag="OQQ26_004087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system connector SafA"
                     /protein_id="HCS1859344.1"
                     /translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLG
                     ISEMGRVARDLTHFIINSLQD"
     gene            4139..4900
                     /gene="ydeO"
                     /locus_tag="OQQ26_004088"
     CDS             4139..4900
                     /gene="ydeO"
                     /locus_tag="OQQ26_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response transcriptional regulator
                     YdeO"
                     /protein_id="HCS1859345.1"
                     /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
                     ERHFKEIGFNENTIKKYLQCTNIQTVTMPVPAKFLRASNVPTGLLNEMIAYLNSEERN
                     HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
                     YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
                     FRKHFGNSPKRVSKEYRCQRHTGMNTGNTMSALAI"
     gene            5302..>5705
                     /locus_tag="OQQ26_004089"
     CDS             5302..>5705
                     /locus_tag="OQQ26_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HCS1859346.1"
                     /translation="MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAF
                     SDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAI
                     EAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPS"
BASE COUNT         1637 a         1216 c         1252 g         1600 t
ORIGIN      
        1 cgctaatcaa tgtgatctac acctggcaat aacgtcgatt cgattttctt agccttcttt
       61 ttaaatcaat tttttaacct taggatatat catgggtaaa acaatcagta taaaggtcct
      121 gttcggtatt tatcttctat taatggcagg caaagttttt gccttcagtt gtaatgtcga
      181 tggcgggtca agtattggag caggtacaac ctctgtttat gttaatctcg accctgtaat
      241 acaaccggga cagaatctgg ttgtagactt gtctcagcat ataagttgct ggaatgatta
      301 cggcggctgg tacgacactg atcatataaa cctggtacaa agctcagctt tcgcaggctc
      361 cctacagtca tataaaggat cgctgtactg gaatagtgtg acctacccct tcccgttgac
      421 gacaaatacc aacgtattgg atattggtga taagacaccg atgccattac cgttaaaact
      481 ctatattacc ccagtcgggg cggccggtgg agttgtcata aaagccgggg aagttattgc
      541 ccgtattcat atgtataaaa ttgccacgtt aggaagcgga aatccgcgta attttacgtg
      601 gaatattatt tcaaataaca gtgttgttat gccaacaggc tgctgcactg ttgatagtcg
      661 taatgtcacc gtgaatctcc cggactttcc tggaagcgca gaaatacccc ttggcgtata
      721 ttgctcaagc gaacaaaagc tctcatttta tctttcgggt gccaccactg acagtgcccg
      781 acaagtgttt gctaacacag cacctgatgc aacaaaagca tcgggagtgg gtgtctctct
      841 gatgcgtaat ggaaaaatac tggctacggg agaaaatatc tccctgggga cagtaaataa
      901 aagcaaagta cctctgggtt taaacgcaac ctatggacaa acaggaaaca aagtttcagc
      961 cggaaccgtc cagtcagtca ttggtgtcac ttttatctat gaataattgt gattttgacc
     1021 ttagtctatg cgctccattc acgaaaattg cgcggataat tattttgtga aggctattat
     1081 cctacacttg taagaaaatc cgcgcacaat tgaagccaga gtcttatttt ttatattgaa
     1141 aaacatgtta atttaaacac tatgagagat gatgcttaat ttatcgtatt taatcttttg
     1201 tttaacgata atagattaaa aatagaaaga gagttgtccc ctactcttat atatccatgt
     1261 tgacgataat ccctttgtat atactgtgca tcatcgctat tacaaatcct aataattcat
     1321 ttccacacag gataagtaga tgaagaaaaa aattgaatcc taccagggtg ctgccggtgg
     1381 ttggggtgct gttaaatccg tagcgaatgc agtacgtaag cagatggata tacgccagga
     1441 tgttattgcc atgtttgaca tgaataagcc agagggcttt gactgtccgg gttgtgcatg
     1501 gccagatcct aagcacagtg cgtcattcga catttgtgaa aacggcgcaa aagcaatcgc
     1561 ctgggaagtt acggataagc aggtaaatgc ctctttcttt gctgagaata cggttcaatc
     1621 attacttgcc tggggagatc acgagcttga ggctgcggga cgtctcactc agcctttgaa
     1681 atatgatgcc gtcagcgact gttacaggcc attaagctgg caacaagctt tcgacgaaat
     1741 tggcgctcgc cttcaaagct atagtgatcc caatcaggtt gaattctata cttcggggcg
     1801 cacttccaat gaagctgcct ttctttatca gctttttgcc cgtgaatacg ggagcaataa
     1861 ctttcccgac tgctccaaca tgtgccatga accgaccagt gtgggtttgg catcgagtat
     1921 cggtgtgggt aaagggaccg tgttgctgga agactttgag aagtgcgatt tagtcatttg
     1981 cattgggcat aaccctggta caaaccaccc tcgcatgctg acttcgttgc gcgctttagt
     2041 gaaacggggc gcgaaaatga tcgccataaa ccctctacag gaacgtggtc tggagcgatt
     2101 taccgcaccg caaaacccgt ttgaaatgct gacgaactct gagactcagt tggccagtgc
     2161 ctactacaac gtgcgcattg gtggcgatat ggcgttgctc aaggggatga tgcgcctgtt
     2221 aattgagcac gatgatgctg caagtgccgc aggtcggccc tcattgcttg atgacgaatt
     2281 tattcaaacg cataccgtcg gctttgacga gctacgccgt gacgttctca attccgagtg
     2341 gaaagatatc gaacgtattt ctggactaag tcagacacaa atcgccgaac tggctgacgc
     2401 atatgccgct gccgaacgca ccattatctg ttacggaatg gggatcactc agcacgaaca
     2461 tggtacccag aacgtacagc aactggtcaa tttgctgttg atgaaaggta acattggcaa
     2521 gcctggtgcg ggtatctgcc cactacgtgg tcactctaat gtacagggcg accgaaccgt
     2581 cggtatcacc gagaaaccgt ctgcagagtt tctggctcgc ctgggtgagc gctatggctt
     2641 caccccacct catgcacctg gacatgctgc aattgccagc atgcaagcaa tatgtacggg
     2701 gcaggctcga gcattgatct gcatgggggg caactttgca ctggcaatgc cagatcggga
     2761 agcgagcgct gtaccgttaa cgcaattaga tttggcggta cacgtagcca ctaagcttaa
     2821 ccgctctcat ctgctgaccg cacggcatag ctatattctg ccggttctgg ggcgtagcga
     2881 gattgatatg caaaaaagcg gtgcgcaggc ggtaaccgtt gaggattcaa tgtcgatgat
     2941 tcatgcctcg cgtggcgtgt taaaacccgc cggtgtaatg ctgaaatcag agtgtgcagt
     3001 ggtcgcggga atcgcgcagg cagcactacc ccagagcgtg gtagcctggg agtatctggt
     3061 ggaagattat gatcgcattc gcaatgacat tgaagctgtg ctgccagagt tcgccgacta
     3121 taaccagcgc atccgtcatc ccggtggttt tcacctgata aatgcagctg ctgaaaggcg
     3181 ctggatgacg ccgtcaggta aggctaattt cattaccagc aaagggctgt tagaagatcc
     3241 ctcttcagcg tttaacagta agctggtcat ggcgacagta cgcagccacg atcagtacaa
     3301 cacgacgatt tatggtatgg atgatcgcta tcgaggggta ttcggtcaac gagatgtggt
     3361 ctttatgagt gctaaacaag ctaaaatttg ccgtgtaaaa aacggcgaaa gagttaatct
     3421 tattgcgctt acgccagacg gtaagcgcag ctcacgccgc atggatagat taaaagtggt
     3481 catttaccct atggctgacc gctcactggt gacctatttt ccagaatcga atcacatgct
     3541 aacacttgat aaccacgatc cattaagtgg cattcctggc tataaaagta ttccggttga
     3601 attagaacca tcaaattaat gcctcttctc atttcttctg ctgtcatccg cacagcagaa
     3661 gaatccctca ttgactatta tcgcgcaatt tgctcacatg gattaaatta aactacatac
     3721 tataagatat aaacttctgc ctacagctgt aagaaactcc gctcagtact gaagtgccag
     3781 tcctatttcc tcttttctcc agcctgttat attaagcata ctgattaacg atttttaacg
     3841 ttatccgcta aataaacata tttgaaatgc atgcgaccac agtgaaaaac aaaatcacgc
     3901 aaagagacaa ctataaagaa atcatgtctg taattgtggt tgtcttatta ctgacactta
     3961 cgttgatagc cattttttcg gcaattgatc agctgggtat ttcagaaatg ggtcgcgttg
     4021 caagagatct tacacatttc attatcaata gtttgcaaga ctgaaaataa acagcaaatt
     4081 ataaatatga aatgttaaaa aagtatcgat aaaaacttta ttgttttaag gagataaaat
     4141 gtcgctcgtt tgttctgtta tatttattca tcatgccttc aacgctaaca ttttagataa
     4201 agattacgcc ttctctgacg gcgagatcct gatggtagat aacgctgttc gtacgcattt
     4261 tgaaccttat gagcgacatt tcaaagaaat cggatttaat gaaaacacca ttaaaaaata
     4321 tctacaatgc actaacatcc agacagtgac gatgcctgtt cctgcgaagt ttttacgtgc
     4381 ttcaaatgta ccgactggat tgcttaatga aatgattgct tatctcaact cggaagaacg
     4441 caatcatcat aatttttcag aacttttgct tttttcttgc ctgtctatat ttgccgcatg
     4501 caaaggtttc attacactat taactaacgg tgtgctatcc gtttccggga aagtgagaaa
     4561 tattgtcaac atgaagttgg cgcacccatg gaagctgaaa gatatttgtg actgcctgta
     4621 catcagtgaa agcctgttga agaaaaaact taagcaagag caaacgacat tctcacagat
     4681 tcttttagat gccagaatgc agcacgcaaa aaatttgata cgcgtagaag gttcagtcaa
     4741 taaaattgcc gaacaatgtg gttatgccag tacatcttat tttatttatg cgttccgcaa
     4801 acatttcggc aacagtccga agagagtttc taaggagtac cgttgtcaaa ggcacaccgg
     4861 tatgaataca ggcaacacga tgagtgcttt agctatttga ttatttgcta acgagtagtc
     4921 aaccacgcac gctacgtaag aattatatgg ggcagccatt ccctgccccg cgttgttttt
     4981 aggcgatata tttattgaaa taaataagtg acatccatca catatttatg cacttgcata
     5041 acctgttgca tgattattta tgatctcaat tcggcatttt gtcagtaaaa cgcaataatt
     5101 tattaaatat caataaatta gttgtttatc ggcgagaaat tacttaatag aacagaaagt
     5161 aatgtcaacg ctttatggac tgttatttcc ctttttttag ctaaatctgc tatctcttta
     5221 tgtgactaac ttcacttaca tccacttatt tctcttcgta aaattacttc ggaattaagt
     5281 acaataagaa gaggaacatt tatgaagtct gcattaaaga aaagtgtcgt aagtacctcg
     5341 atatctttga tactggcatc tggtatggct gcatttgctg ctcatgcggc agatgatgta
     5401 aagctgaaag caaccaaaac aaacgttgct ttctcagact ttacgccgac tgaatacagt
     5461 accaaaggaa aaccaaatat tatcgtacta accatggatg atcttggtta tggacaactt
     5521 ccttttgata agggatcttt tgacccaaaa acaatggaaa atcgtgaagt tgtcgatacc
     5581 tacaaaatag ggatagataa agccattgaa gctgcacaaa aatcaacgcc gacgctcctt
     5641 tcattaatgg atgaaggcgt acgttttact aacggctatg tggcacacgg tgtttccggc
     5701 ccctc
//
LOCUS       DAJVTL010000200         5655 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.202, whole genome shotgun sequence.
ACCESSION   DAJVTL010000200 DAJVTL010000000
VERSION     DAJVTL010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5655
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.202"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..804)
                     /locus_tag="OQQ26_004090"
     CDS             complement(<1..804)
                     /locus_tag="OQQ26_004090"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate/propionate family kinase"
                     /protein_id="HCS1859347.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
                     LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD
                     EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
                     WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESG"
     gene            complement(830..2161)
                     /gene="tdcC"
                     /locus_tag="OQQ26_004091"
     CDS             complement(830..2161)
                     /gene="tdcC"
                     /locus_tag="OQQ26_004091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
                     /protein_id="HCS1859348.1"
                     /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
                     GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
                     LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
                     VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
                     VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
                     TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
                     YLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM
                     GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
     gene            complement(2183..3172)
                     /gene="tdcB"
                     /locus_tag="OQQ26_004092"
     CDS             complement(2183..3172)
                     /gene="tdcB"
                     /locus_tag="OQQ26_004092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HCS1859349.1"
                     /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
                     SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
     gene            complement(3271..4209)
                     /gene="tdcA"
                     /locus_tag="OQQ26_004093"
     CDS             complement(3271..4209)
                     /gene="tdcA"
                     /locus_tag="OQQ26_004093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HCS1859350.1"
                     /translation="MSTILLPETQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
                     IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
                     FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEIKL
                     QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
                     WSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG"
     gene            4398..4742
                     /gene="tdcR"
                     /locus_tag="OQQ26_004094"
     CDS             4398..4742
                     /gene="tdcR"
                     /locus_tag="OQQ26_004094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TdcR"
                     /protein_id="HCS1859351.1"
                     /translation="MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMS
                     KFSNFIINKPFSAINNAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
                     DRTSFCECNRFP"
     gene            4998..5537
                     /locus_tag="OQQ26_004095"
     CDS             4998..5537
                     /locus_tag="OQQ26_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312027.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859352.1"
                     /translation="MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTN
                     DVNKIYSISNELRRVLSAITALNFYQGDVPSVMIRIQPENMSPFIIDISTGEHDDYII
                     QTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPPAHFNKTSIT
                     SDCWQILFFSPDHFNNDFY"
BASE COUNT         1696 a         1299 c         1180 g         1480 t
ORIGIN      
        1 tcccgactct ttattcacta cgcgttccag gtcacccaag ctctggttgg tttggctggc
       61 gacccaggac atcgcaccaa aatcgacatc gccactgcgg gtacccatca tcaagccttc
      121 cagcggcgtc attcccattg aggtgtcaac actctgaccg ttgcgaactg cgcagattga
      181 cgcgccattg ccaagatgcg ccacaaccag gccggagtca tcttccgcca gattcagcaa
      241 agaatgtgcg cgctgggaaa catagcggtg cgacgtgccg tggaaaccat aacggcgtac
      301 acctaactct tcataatatt tccacggcag gccgtataaa taagcttccg gagccatcgt
      361 ctggtggaaa ctggtatcaa ataccgccac ctgagttacg cccggaaata attgctgcgc
      421 cgattcaata ccacttaaat tggcgtaatt atgcaggggt gccagtggag aaacgcgacg
      481 gatattatca atgacctcat cggtaataat ggcggactcg gtaaaaatac tgccgccgtg
      541 agcgatgcgg tggccaatta aggccacact gtcatttaaa ttccgttttt ccagttcaaa
      601 tgcaattgcc ttcaatgcac cttcgtagct gtggtgagcc agcggtgctg gctctccccc
      661 atttacggat aagaatgcat tttccgagtt aataccgtcg gcaatacctg acattaatac
      721 ttcacagtcg ctggcatcga gtacggaaaa cttaatcgaa gacgaaccac agttaataac
      781 caaaacaacc ggaaattcat tcatctcttt tctcatcctg agttacggat taaaacagtt
      841 tgtatacgat gttcaggatg gtcagcagac caatcacggt aacaaacacg ttatccagac
      901 gaccacggta tttcgccaga gacggcgctt tacggatggc atacatcggc aacaggcaca
      961 gcagggatgc gataatcggt gcgcccatgg cttcaataag gtcgaggatg ttcgggttgg
     1021 cgtaggcaac aacccaggtg gagcccatga tgaagatcat gctgatagtg ttcagtttac
     1081 ccagcgacac tttagttttg tcgcctttat aaccaaactt caggaccagg ccattcagac
     1141 cttccagcgt tcccagatag tgaccgaaga aagatttgaa gatagccacg agtgcgatga
     1201 tggaagccgc atattccagt gtaatcgcga acgttgtttt ggtaccggtc atggacgcaa
     1261 agtggttagc cagataagaa agcactggaa tattctgcgc tttggcttcc gccatgttgg
     1321 ccggagacag cgtaaacagg cagctaaagg caaagaacat caccactgca accatcagca
     1381 tgctggcacg agaaatgatt tgggaacatt tacgttcggt gaagtcgcga ccgaagtctt
     1441 tctcatactc ttcacgttta gaaaccacga aggaagagac gattggcgag aagttaaagg
     1501 agaaaaccat gatggaaatc cccagccaga cagtgatcag gataccgtca tgaccggtta
     1561 acgacagcga accgaggtca acctggtcga taaccgcaga gttccagtaa gggatcagcg
     1621 acagagaaat cagcaccagg ctggcgataa acggccatac caggtagctc atcactttaa
     1681 ccatcagatc cttaccaaac cagatgacga aagccatcag cagcagcagg aacagcgcca
     1741 caaagccgcg attcagcggt gcaaagccga gctggttttc ccagaacgtc ataaaggtat
     1801 tggtaatagt aacgccataa atccacaaca gtgggcaaat cgcgaagaag tacaggaacg
     1861 tgataaccac gccgccagtt ttaccaaaat gctcttccac cgtttccgta atgttgccgg
     1921 aagggttaga gccagaaaga cacagacgcg ccagcgcccg gtggcaataa aatgcgatgg
     1981 ggtatgccaa taccaacatc agaagaatcg ggatcagtcc gccaaaacct gcgcggatag
     2041 ggaagaacag caccccggcg ccgattgccg taccaaacaa gcctaacgtc catgtggtat
     2101 ctgatttacg ccaggacgat tgttttgtct ggctggatac aatgctatct gaagtactca
     2161 tatcctatcc tcaacgaatt aattaagcgt caacgaaacc ggtgatttga gagacgcgag
     2221 aaagatcgat attgccgccg gaaataatac tgacggtttt tctgttttga atatattggt
     2281 ctaatttacc gcttaataat gcagcacatg ccagagcgcc tgcgccttcg gtgacgactt
     2341 tattgcgctg aattaaggca atcatactgt ttctgatttc gtcttcgctg accagcacga
     2401 tgtcatcgac taattcacga acgatttcgt acgttaaatt acccgggcgg gagacatcac
     2461 aaccatccgc cagggtgccg gtagttcggt gcgtggttat ttctccggag tggaaagaag
     2521 ccgccatgcc gtgaacgttt tcagactgta cgccaataac acgaatggtc gggttaatag
     2581 atttaattgc caccgcaata ccagcaatta aaccgccacc accaattggc acaatcacgt
     2641 tatcgacatc atagagatct tccataattt ccagaccaat cgttccctgg ccagcaatca
     2701 ctttcggatc atcgtaaggt gggataaaaa tacggccttc catttcgaca atttcgctca
     2761 ctttagcgat agtgtcgttg aagttatcac catgcagaac gacttctgcg gagtagtcgc
     2821 acgttgccgc tactttggat tttggcgcac cttttggcat caccacttta ccgtcgatac
     2881 ccagcatcgc gcaggagagc gaaacccctt gcgcatggtt gcccgcagaa caggccacca
     2941 cgcctttgcg tttttccgca tcggtcagtg aacttaattt attaaatgcg ccacgaattt
     3001 taaatgaacc cgtacgctgc atattttcaa acttcaggaa tatttcacct ttgcaacgtt
     3061 cactaaaata gttggagcga ggcatgcctg ttttataaat tcgcccagcc agtcgttgtt
     3121 tcgcttcaat aatatcatca atagcaaccg gcagatcgta tgtaatatgc attataaaac
     3181 ctcttcgcct gaattaaata tgtaggtaac cgtaaccgac acctgcaaaa cagacaggtg
     3241 gattatttat gtttaaataa aaacaaataa ctaaccaact tctattaatt gccttcgtct
     3301 acacccatta taagatgaat actctttggc taattccacc aaaaccgatg ctgctttttt
     3361 aatacgataa tttttcgacc ataccgcggc atattgtgcc acaggtaatg tttcttcaac
     3421 cggaatagta ataaattgat tagaaccaaa aggtgacgtc atatcacaag gaattacagt
     3481 taagaaatca gcattgagaa caagattata aattgtcacg actgagtcgg ttttaacgat
     3541 gttttcaata ctgatgccat ttctttgtaa cgtagtaagc agttcgctgt agtaccccat
     3601 attagtttgt ggcaacaccc actgttcgtt cttcaacgac tccagcgtgg tggtgccggt
     3661 gcatgttcgg gacttactgg ctaccagcac aaactcggac tcgaacagcg gctcaacatg
     3721 taaatcctga agctttattt ctgcacttaa cgtaccaatc gcaaaatcca gtcgaccgtc
     3781 gcggattgcc ggtaagaacg aagacagttg tgcttcatac atagaaacct gcgctttcgg
     3841 aaacacctct ttgaacttgt tgatcatccc ggacataaaa gtaaaaccaa tcaatgaagg
     3901 aaaaccaaat gagacttcca ccaccgcctc agaagacata ccgcttatct cattaaccat
     3961 atttttcatt tcacgggtaa tggattcgga acgggagagt aacaattgac cggcaggtgt
     4021 taatgttaca ccggtatttt tccgcaccac taattccacg ccaaaataat cttcaatatc
     4081 gttaatgatt ttactgacgg ccggttgagt taaccctaat tcttttgcag ccgagccgat
     4141 agagccactt ctaatgactt cctgaaagac taccaggtgc tgcgtttccg gaagaagaat
     4201 agtgctcata acgacctacg ttaattacct cagtgacggc atgaagtgta tcaaaatgaa
     4261 atgaacagga tatgtgagac cactcacaaa ttaactttca atactttcca gggtatcgtt
     4321 attccaatta aatatcttta tatatcaata agttaaagta taaaaatcag cataaaccct
     4381 gatttttgtc aaaaaaaatg acggggataa ccatatttta tggcgataac atcattcgtt
     4441 atgtggttaa tacaaaaaag gggctgagac catatttcaa gcaattaccg gataattacc
     4501 aggcaaaatt tgagttaaat ttaatgagca agttctcaaa ttttattata aataaaccat
     4561 tttcagcgat aaataatgcg gcacgtcaca ttttttcacg ttatttgttg gagaacaaac
     4621 atttatttta tcaatatttt aaaatttcga atacaggtat tgatcatctc gaacaattga
     4681 ttaacgtcaa ctttttttct tctgacagga cgtcattttg tgaatgcaat cgttttccat
     4741 aaattcttct cccctcatag gcgacgaata gcattttgtg ttgaggatca caaaacgaat
     4801 aattgctggt cgccgcgata aggtcagaca aagacaacaa gggaaatttt cacagagctt
     4861 ttgatcggcg taggccacag aatgttgctt cgtttactgt aacgccgggt aaatgagcgt
     4921 tttttgatag tgcgaaagaa ccctgcgagg aaaataagca tctattattg tttgtcatga
     4981 cgacaaggca ggcatcaatg aaaggcttcc caattgcaca tatttttcac ccttcaatcc
     5041 cgccaatgca cgcagtggtt aacaatcaca atagaaatat tgattattgg acggtaaaaa
     5101 gaaagtttgc agaaattgtc tccaccaatg acgttaataa aatttacagt ataagtaatg
     5161 aactgcggag agtattatct gcaattactg cattgaattt ctatcaaggc gatgttcctt
     5221 ctgtcatgat ccgaatccaa ccggaaaata tgagtccatt catcatagat atttctacag
     5281 gagaacatga cgattatatc atacaaacat tagatgtagg cacttttgca ccttttggtg
     5341 aacaatgtac ttgctcagcc gtcaataaaa aagagctgga atgtattaag gagacgattt
     5401 ctaagtattg tgcaaaattc acccgaaaag aagccatctt aacacctcct gcgcacttta
     5461 ataaaaccag cattacttca gattgttggc aaattctctt tttttcaccc gatcatttta
     5521 ataatgattt ttattgatta tttataaagg ataaaataat gttccctgtt tcatcaattg
     5581 gtaatgatat tagtagtgat ttagtccgtc gaaaaatgaa tgatcttcct gaaagcccca
     5641 tagttaataa cctcg
//
LOCUS       DAJVTL010000201         5621 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.203, whole genome shotgun sequence.
ACCESSION   DAJVTL010000201 DAJVTL010000000
VERSION     DAJVTL010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5621
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.203"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(65..802)
                     /gene="bamD"
                     /locus_tag="OQQ26_004096"
     CDS             complement(65..802)
                     /gene="bamD"
                     /locus_tag="OQQ26_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HCS1859353.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
                     PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARVAFSDFSKLVRGYPNSQYT
                     TDATKRLVFLKNRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM
                     ENAYRQMQINAQAEKVAKIIAANSSNT"
     gene            937..1917
                     /gene="rluD"
                     /locus_tag="OQQ26_004097"
     CDS             937..1917
                     /gene="rluD"
                     /locus_tag="OQQ26_004097"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HCS1859354.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
                     VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
                     VVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
                     RVHMRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
                     QALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL"
     gene            1914..2645
                     /gene="pgeF"
                     /locus_tag="OQQ26_004098"
     CDS             1914..2645
                     /gene="pgeF"
                     /locus_tag="OQQ26_004098"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HCS1859355.1"
                     /translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
                     DHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNRAGTEVAAVHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
                     AFEVGAEVREAFMAVDAKASAAFIQHGDKYLVDIYQLARQRLANVGVEQIFGGDRCTY
                     TENETFFSYRRDKTTGRMASFIWLI"
     gene            2775..5348
                     /gene="clpB"
                     /locus_tag="OQQ26_004099"
     CDS             2775..5348
                     /gene="clpB"
                     /locus_tag="OQQ26_004099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HCS1859356.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
                     HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
                     VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE
                     ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
                     Q"
BASE COUNT         1397 a         1343 c         1521 g         1360 t
ORIGIN      
        1 caactgatcc ttaactgatc ggcattacag ctcaagggct gccgttttgt gtttcaggtt
       61 tctgttatgt attgctgctg tttgcggcga tgattttcgc tactttttca gcttgcgcat
      121 ttatctgcat ctgacggtat gcattttcca tcagtggcag cgcatcacgc gtagcctggg
      181 tatccgggta gtcgcgcaac atgccttcta cgcggttaac gacggcaacc catgcaccac
      241 gttctgtata gtactcggca acggagtatt catatttcgc cagacgattt ttcaggaata
      301 ccagacgttt ggtggcatcg gtagtgtact gactgttcgg atagccgcgc accagtttgg
      361 aaaagtcact aaacgcaact cgtgcatgtt gaggatcgcg atcgctacgg tcaacgccaa
      421 agaacccttg cagcgcactg tcatccagcg ccatattggt caggccacgc atgtacatga
      481 cataatcgat attcggatgg gtcgggttaa ggcgaataaa acgatcgatg gcagcctgtg
      541 ctaacggcaa atcggcgttt ttatagtagg cgtagatgag atccaactgc acctgctgcg
      601 aatacggacc aaacggatag cgattatcta acgcttccag ttgcgttatt gcctgtctcc
      661 agttaccgtc ctgcagcttt tgttgtgcag tcgcgtaaat ttcatttggc ggattatcag
      721 gtacttcttc ctttgacccc gagcaacccg ccaaaaacag gcttagtgtg gcggctgcca
      781 ccagatattt catgcgcgtc atgacgtttt gactttcctc aaaatgtaat acgggagatt
      841 ctctgttcct gctcccggtt aagaccagct acaatagcac actatattaa acggcaaagc
      901 cgtaaaaccc caacgataaa cgaagaagca gtatatatgg cacaacgagt acagctcact
      961 gcaacggtgt ccgaaaacca actcggtcaa cgcttagatc aggctttggc tgaaatgttc
     1021 ccggattatt cacgttcgcg gataaaagaa tggatcctcg accagcgcgt gctggttaac
     1081 ggcaaagttt gtgataagcc gaaagaaaaa gtattgggtg gcgagcaggt tgccatcaac
     1141 gctgagattg aagaagaagc gcgttttgaa ccgcaggata tcccgctgga tatcgtctat
     1201 gaagatgaag atatcattgt cattaataaa ccgcgcgacc tggtagtaca tcctggcgcg
     1261 ggtaacccgg atggcacggt actgaatgcg ttgcttcatt attatccgcc cattgccgat
     1321 gtaccgcgtg cgggcatcgt ccatcgtctg gataaagaca ccaccggcct gatggttgtg
     1381 gcaaaaaccg ttccggctca gacgcgttta gtcgaatctt tgcaacggcg tgaaattact
     1441 cgtgagtatg aagcggtggc gattggtcat atgaccgctg gcggtacagt agatgaaccc
     1501 atcagccgcc acccgaccaa acgtactcac atggcggtgc atccgatggg caaaccggcg
     1561 gtgactcact atcgcatcat ggaacacttc cgtgtgcaca tgcgtctgcg gttgcgtctg
     1621 gaaactggac gtacgcacca gatccgcgtg catatggccc atatcactca tccgctggtg
     1681 ggcgatccgg tttatggtgg ccgtccgcgt ccgccaaaag gtgcttcgga agcatttatc
     1741 tccacactgc gtaagtttga ccgccaggcg cttcatgcaa ccatgctgcg tctttatcac
     1801 ccgatctccg gcatcgaaat ggaatggcat gcgcctattc cacaagatat ggtggagctg
     1861 attgaggtga tgcgcgccga tttcgaagag cataaggatg aagtggactg gttatgagta
     1921 agctgattgt cccgcagtgg ccgctgccaa aaggtgttgc ggcctgtagc tccactcgta
     1981 tcggcggcgt gagcttgccc ccgtatgact cactcaacct cggtgcccat tgtggcgata
     2041 acccggatca cgttgaggag aatcgcaagc gactttttgc tgcgggcaat ttgccttcta
     2101 aaccggtctg gcttgagcag gtacacggca aagatgtgct taagcttact ggcgaacctt
     2161 atgcctcaaa acgagcagat gcctcttata gcaatacgcc tggcacggtt tgcgcagtga
     2221 tgactgccga ctgcctccct gtgctgtttt gcaatcgagc gggaacggaa gtcgccgccg
     2281 ttcatgctgg ctggcgtgga ctgtgcgcag gcgtgctgga agagacggtt tcctgttttg
     2341 ctgataaacc tgaaaacatt ctcgcctggt tagggccggc aattggtcca cgcgcgttcg
     2401 aagtgggggc ggaggttcgc gaggcgttta tggcagtaga cgctaaagca agtgcagctt
     2461 tcattcagca tggtgataag tatctggtgg atatttatca gcttgctcgg cagcgtctgg
     2521 cgaacgtggg tgttgagcaa attttcggcg gcgaccgttg tacatatacg gaaaatgaga
     2581 ctttcttctc ttatcgtcgc gacaagacca ccggtcgtat ggcaagtttc atttggctga
     2641 tataacctaa agaatcaaga cgatccggta cgcgtgattt tcttttcaca ttaatctggt
     2701 caataacctt gaataattga gggatgacct catttaatct ccagtagcaa ctttgatccg
     2761 ttatgggagg agttatgcgt ctggatcgtc ttactaataa attccagctt gctcttgccg
     2821 atgcccaatc acttgcactc gggcacgaca accaattcat cgaaccactt catttaatga
     2881 gcgctctgct gaatcaggaa ggggggtcgg ttagtccttt attaacatcc gctggcataa
     2941 atgctggcca gttgcgcaca gatatcaatc aggcattaaa tcgtttaccg caggttgaag
     3001 gtactggtgg tgatgtccag ccatcacagg atctggtgcg cgttcttaat ctttgcgaca
     3061 agctggcgca aaaacgaggt gataacttta tctcgtcaga actgttcgtt ctggcggcac
     3121 ttgagtctcg cggcacgctg gccgacatcc tgaaagcagc aggggcgacc accgccaaca
     3181 ttactcaagc gattgaacaa atgcgtggag gtgaaagcgt gaacgatcaa ggtgctgaag
     3241 accaacgtca ggctttgaaa aaatatacca tcgaccttac cgaacgagcc gaacagggca
     3301 aactcgatcc ggtgattggt cgtgatgaag aaattcgccg taccattcag gtgctgcaac
     3361 gtcgtactaa aaataacccg gtactgattg gtgaacccgg cgtcggtaaa actgccatcg
     3421 ttgaaggtct ggcgcagcgt attatcaacg gcgaagtgcc ggaaggattg aaaggccgcc
     3481 gcgtactggc gctggatatg ggcgcgctgg tggctggggc gaaatatcgc ggtgagtttg
     3541 aagaacgttt aaaaggcgtg cttaacgatc ttgccaaaca ggaaggcaac gtcatcctgt
     3601 ttatcgacga attacatacc atggtcggcg cgggtaaagc cgatggcgca atggacgccg
     3661 gaaacatgct gaaaccggcg ctggcgcgtg gtgaattgca ctgcgtaggt gccacgacgc
     3721 ttgacgaata tcgccagtac atcgaaaaag atgctgcgct ggaacgtcgt ttccagaaag
     3781 tgtttgttgc cgagccttct gttgaagata ccattgcgat tctgcgtggc ctgaaagaac
     3841 gttacgaatt gcaccaccat gtgcaaatta ctgacccggc aattgttgca gcagcgacgt
     3901 tgtctcatcg ctacattgct gaccgtcagc tgccggataa agccatcgac ctgatcgatg
     3961 aagcagcatc cagcattcgt atgcagattg actcaaaacc agaagaactc gaccgactcg
     4021 atcgtcgtat catccagctc aaactggaac aacaggcgtt aatgaaagag tctgatgaag
     4081 ccagtaaaaa acgcctggat atgctcaacg aagaactgag cgacaaagaa cgtcagtact
     4141 ccgagttaga agaagagtgg aaagcagaga aggcatcgct ttctggtacg cagaccatta
     4201 aagcggaact ggaacaggcg aaaatcgcta ttgaacaggc tcgccgtgtg ggggacttgg
     4261 cgcggatgtc tgaactgcaa tacggcaaaa tcccggaact ggaaaagcaa ctggaagccg
     4321 caacgcagct cgaaggcaaa actatgcgtc tgttgcgtaa taaagtgacc gacgccgaaa
     4381 ttgctgaagt gctggcgcgt tggacgggga ttccggtttc tcgcatgatg gaaagcgagc
     4441 gcgaaaaact gctgcgtatg gagcaagaac tgcaccatcg cgtcattggt cagaacgaag
     4501 cggttgatgc ggtatctaac gctattcgcc gtagccgtgc ggggttggcg gatccaaatc
     4561 gcccgattgg ttcattcctg ttcctcggcc caacgggtgt ggggaaaact gagctttgta
     4621 aggcgctggc gaactttatg tttgatagcg acgaggcgat ggtccgtatc gatatgtccg
     4681 agtttatgga gaaacactcg gtgtctcgtc tggttggtgc gcctccggga tatgtcggtt
     4741 atgaagaagg tggctacctg accgaagctg tgcgtcgtcg tccgtattcc gtcatcctgc
     4801 tggatgaagt ggaaaaagcg catccggatg tcttcaacat tctgttgcag gtactggatg
     4861 atggtcgtct gactgacggg caggggagaa cggtcgactt ccgtaatacg gttgtcatta
     4921 tgacctctaa cctcggttcc gatttgattc aggaacgctt cggtgaactg gattatgcgc
     4981 acatgaaaga gctggtgctc ggtgtggtaa gccataactt ccgtccggaa ttcattaacc
     5041 gtattgatga agtggtggtc ttccatccgc tgggtgaaca gcacattgcc tcgattgcgc
     5101 agattcagtt gaaacgtctg tacaaacgtc tggaagaacg tggttatgaa atccacattt
     5161 ctgacgaggc gctgaaactg ctgagcgaga acggttacga tccagtctat ggtgcacgtc
     5221 ctttgaaacg tgctatccag cagcagatcg aaaacccgct ggcacagcaa atactgtctg
     5281 gtgaattggt tccgggtaaa gtgattcgcc tggaagttaa tgaagaccgg attgtcgccg
     5341 tccagtaaat gataaaacga gcccttcggg gctcgttttt gtctataagt tagacgggaa
     5401 agactatatt taagatgttt tgcctgaaaa gtgagcgaac gataaagttt ttatattttt
     5461 cgcttgtcag gccggaataa ctccctataa tgcgccacta ctgacacgga acaacggcaa
     5521 acacgccgcc gggtcagcgg agttctcctg agaattccga cagagaaagc aaaaataaat
     5581 gcttgactct gtagcgggaa aacgtattat gcacagcccg c
//
LOCUS       DAJVTL010000202         5423 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.204, whole genome shotgun sequence.
ACCESSION   DAJVTL010000202 DAJVTL010000000
VERSION     DAJVTL010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5423
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.204"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            152..409
                     /locus_tag="OQQ26_004100"
     CDS             152..409
                     /locus_tag="OQQ26_004100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HCS1859357.1"
                     /translation="MTLPVFITVIADHDKPQPSGCLLESQGSLCPICRQRITHETGWN
                     VHHKVKKVMGGGEELSNLVLLHPNCHRQLHSCEAGSLKKGL"
     gene            552..773
                     /locus_tag="OQQ26_004101"
                     /pseudo
     CDS             552..773
                     /locus_tag="OQQ26_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(794..856)
                     /locus_tag="OQQ26_004102"
                     /pseudo
     CDS             complement(794..856)
                     /locus_tag="OQQ26_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            1307..2719
                     /gene="ospC1"
                     /locus_tag="OQQ26_004103"
     CDS             1307..2719
                     /gene="ospC1"
                     /locus_tag="OQQ26_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC1"
                     /protein_id="HCS1859358.1"
                     /translation="MNISETLNSANTQCNIDSMDNRLHTLFPKVTSVRNAAQQTMPDE
                     KNLKDSANIIKDFFRKTIAAQSYSRMFSQGSNFKSLNIAIDAPSDAKASFKAIEHLDR
                     LSKHYISEIREKLHPLSAEELNLLSLIINSDLIFRHQSNSDLSDKILNIKSFNKIQSE
                     GICTKRNTYADDIKKIANHDFVFFGVEISSHQEKHPLNTKHHTVDFGANAYIIDHDSP
                     YGYMTLTDHFDNAIPPVFYHEHQSFLDKFSEVNKEVSRYVHGSKGIIDVPIFNTKDMK
                     LGLGLYLIDFIRKSEDQSFKEFCYGKNLAPVDLDRIINFVFQPEYHIPRMVSTENFKK
                     VKIREISLEEAVTASNYEEINKQVTNKKIALQALFLSITNQKEDVALYILSNFEITRQ
                     DVISIKHELYDIEYLLSAHNSSCKVLEYFINKGLVDVNTKFKKTNSGDCMLDNAIKYE
                     NAEMIKLLLKYGATSDNKYI"
     gene            complement(2823..2972)
                     /locus_tag="OQQ26_004104"
                     /pseudo
     CDS             complement(2823..2972)
                     /locus_tag="OQQ26_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            3048..4745
                     /gene="ospD3"
                     /locus_tag="OQQ26_004105"
     CDS             3048..4745
                     /gene="ospD3"
                     /locus_tag="OQQ26_004105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspD3"
                     /protein_id="HCS1859359.1"
                     /translation="MPSVNLIPSRKICLQNMINKDNVSVETIQSLLHSKQLPYFSDKR
                     SFLLNLNCQVTDHSGRLIVCRHLASYWIAQFNKSSGHVDYHHFAFPDEIKNYVSVSEE
                     EKAINVPAIIYFVENGSWGDIIFYIFNEMIFHSEKSRALEISTSNHNMALGLKIKETK
                     NGGDFVIQLYDPNHTATHLRAEFNKFNLAKIKKLTVDNFLDEKHQKCYGLISDGMSIF
                     VDRHTPTSMSSIIRWPNNLLHPKVIYHAMRMGLTELIQKVTRVVQLSDLSDNTLELLL
                     AAKNDDGLSGLLLALQNGHSDTILAYGELLETSGLNLDKTVELLTAEGMGGRISGLSQ
                     ALQNGHAETIKTYGRLLKKRAINIEYNKLKNLLTAYYYDEVHRQIPGLMFALQNGHAD
                     AIRAYGELILSPPLLNSEDIVNLLASRRYDNVPGLLLALNNGQADAILAYGDILNEAK
                     LNLDKKAELLEAKDSNGLSGLFVALHNGCVETIIAYGKILHTADLTPHQASKLLAAEG
                     PNGVSGLIIAFQNRNFEAIKTYMGIIKNENITPEEIAEHLDKKNGSDFLEIMKNIKS"
     gene            4862..4981
                     /locus_tag="OQQ26_004106"
                     /pseudo
     CDS             4862..4981
                     /locus_tag="OQQ26_004106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355812.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
     gene            5100..5372
                     /locus_tag="OQQ26_004107"
     CDS             5100..5372
                     /locus_tag="OQQ26_004107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_145811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859360.1"
                     /translation="MSHNLEHQKVHTRMVKEVLKAVARANNHPYKSVFADFITGHPSC
                     TVCFWETFHKMYPDSPYEYVTFCHTCRRFDLYETEAEMKADDPKWW"
BASE COUNT         1820 a         1030 c         1053 g         1520 t
ORIGIN      
        1 ttcaatcaaa gcgcagaact tctgcgtctt cttcgtcaaa aaaatcatct tcgtgaagct
       61 tcacgacata gcggggaagt ttgcttcttt gagaggcggg tttacgttta cggggtttag
      121 ctgaacgggc catataacca cctgaaagac aatgacattg cctgttttta taacggtaat
      181 tgcagaccat gacaaaccgc agccgtcagg ctgcctactc gagtcacaag gctctctgtg
      241 tccgatatgc cggcagcgca ttacccatga aactggctgg aacgtacacc ataaggtgaa
      301 gaaagttatg gggggcggtg aagaattatc taaccttgtc ttgttacatc caaattgcca
      361 tcgacagtta cacagttgtg aagccggctc tctcaaaaag ggcttataaa ggcttgagcg
      421 gtgtaccggg aaaccggtat gcaccgttct taggggaggg cagtccagca atgaactgtc
      481 cttacccgac aaacatccaa aacgaacgga acgtgctgga atccgcatat aacccgttgt
      541 aaagtgagga aatggacacc tcacttgctc atgagaacgc ccgcctgcgg gcactgttgc
      601 agacgcaaca ggacactatc caccagatgg ctgaatacaa ccgcctgctc tcacagcgga
      661 tggcggctta tgcttccgaa atcaaccgac tgaaggcgct ggttgcgaaa ctgcagcgta
      721 tgcagttcgg taaaagctca gaaaaacttc gcgcaaaaac cgaacggcag attccatttt
      781 cacgggcgat ctacgccaca caggctctgg gttgcagtga ctgctccatt aaggcgattt
      841 tgaactcata agggaagtaa caaaaaaact gcaaaagtac aataattata tatggccaaa
      901 ctaacctcta ttaaaaaaac atcagttttt cacacttagt tgagcttcat gaaaaaatca
      961 tcgaggattt cattgcagaa tacacattcc actaactgga agcactccat aagaggaatc
     1021 agagaaagta tcgttttttt atagtaaaat tcattgctat tcaataaaat tgatatagtt
     1081 attaaattat gaaaataatt tcacaaaaaa gattaacttg agttcttaag catcggattt
     1141 tagatatttt gaaatatctg gcatcacata acatcaaaag tatataatac ccttatctaa
     1201 ttacatgcag tatattgtat atatactcaa aaattgtaat tcataccctg ccctatcttg
     1261 tagggaaaga tattaattaa aactgttttc atataaggtt cattttatga atatatcaga
     1321 aacactgaac tcagcaaata cccaatgcaa tatagattct atggataaca gattacatac
     1381 attgtttcca aaagtgacat cagtgcgaaa cgctgcacaa caaactatgc cagatgaaaa
     1441 aaatttaaaa gatagtgcaa atattattaa agatttcttt aggaaaacta tagcagcaca
     1501 gagttatagt agaatgttct ctcaaggctc taactttaaa tctttaaata tagcaattga
     1561 tgcaccatca gacgctaaag cctcatttaa ggctattgag caccttgaca gattatcgaa
     1621 gcattatata tctgaaataa gggaaaaact tcatcctctt tctgcagagg aactcaattt
     1681 gctttcgcta attattaatt ctgatttaat cttcagacat caaagtaatt ctgatttgtc
     1741 tgataaaatt ttaaacatta agtcattcaa taaaattcag tctgaaggaa tatgcacaaa
     1801 acgaaacaca tacgctgatg atataaaaaa aatagctaat catgactttg tgttttttgg
     1861 cgttgaaatc tctagccatc aggaaaaaca ccccctgaat acaaaacatc acactgttga
     1921 ttttggtgca aatgcgtata tcattgatca tgactctcca tatggatata tgacattaac
     1981 cgatcacttt gataatgcta ttccacctgt tttttaccat gagcaccaat catttttaga
     2041 taaattttca gaggttaata aagaagttag tcgatacgta catggaagta aaggaattat
     2101 agatgtacca atattcaata ctaaagatat gaagttaggg ctcggattat acctgattga
     2161 ctttattaga aaaagtgaag accaaagctt caaggagttt tgctatggaa aaaatcttgc
     2221 ccctgtggat ctggatagaa tcataaactt tgtttttcag ccagagtacc atatacctag
     2281 gatggtaagt acagaaaact tcaaaaaagt taagattaga gaaatatcct tagaggaggc
     2341 tgttacagca tctaattacg aagaaattaa caagcaggtc actaacaaaa aaattgctct
     2401 ccaggctctt tttctttcga ttactaatca aaaagaggat gtcgccttat atatattatc
     2461 taattttgag ataactagac aagatgttat ttccataaag catgagttgt atgatattga
     2521 gtatctactt agtgctcata attcaagctg taaagtactt gagtatttta tcaataaggg
     2581 attggttgat gtaaacacaa agttcaaaaa aactaatagt ggggattgta tgttggataa
     2641 cgcaataaaa tatgagaatg cagaaatgat aaaactatta ttgaaatatg gtgcaacatc
     2701 tgacaataaa tatatttaat caaaattgaa tatcgtttag caaaaggcag tatttgcaca
     2761 aaatatcgat atattgttta ttgtcagtat ggctcaatgt gataatagtt ggaaagtttg
     2821 atgggtttcg ccccgttgta gcggtagtcg agctggaagg tcttcaggca ctgcttacag
     2881 cgatagagca gcccccctga actggaatgg ccgttccgga tacccccctg agtttcagag
     2941 taacggggac aaaccacatc aatctttgcc atcaatcatc caaagggcaa agagtacaac
     3001 aacactaagt ctgcgtcaca acccatcaat gaaaggaata tatacatatg ccatcagtaa
     3061 atttaatccc atcaaggaaa atatgtttgc aaaatatgat aaataaagac aacgtctctg
     3121 ttgagacaat ccagtctcta ttgcactcaa aacaattgcc atatttttct gacaagagga
     3181 gttttttatt aaatctaaat tgccaagtta ccgatcactc tggaagactt attgtctgtc
     3241 gacatttagc ttcctactgg atagcacagt ttaacaaaag tagtggtcac gtggattatc
     3301 atcactttgc ttttccggat gaaattaaaa attatgtttc agtgagtgaa gaagaaaagg
     3361 ctattaatgt gcctgctatt atttattttg ttgaaaacgg ttcatgggga gatattattt
     3421 tttatatttt caatgaaatg atttttcatt ccgaaaaaag cagagcacta gaaataagta
     3481 catcaaatca caatatggca ttaggcttga agattaaaga aactaaaaat gggggggatt
     3541 ttgtcattca gctttatgat cccaaccata cagcaactca tttacgagca gagtttaaca
     3601 aatttaactt agctaaaata aaaaaactga ctgtagataa ttttcttgat gaaaaacatc
     3661 agaaatgtta tggtcttata tccgacggta tgtctatatt tgtggacaga catactccaa
     3721 caagcatgtc ctccataatc agatggccta ataatttact tcaccccaaa gttatttatc
     3781 acgcgatgcg tatgggattg actgagctaa tccaaaaagt aacaagagtc gtacaactat
     3841 ctgacctttc agacaatacg ttagaattac ttttggcagc caaaaatgac gatggtttgt
     3901 caggattgct tttagcttta caaaatgggc attcagatac aatcttagca tacggagaac
     3961 tcttggaaac ttctggactt aaccttgata aaacggtaga actactaact gcggaaggaa
     4021 tgggaggacg aatatcgggt ttatcccaag cacttcaaaa tgggcatgca gaaactatca
     4081 aaacatacgg aaggcttctc aagaagagag caataaatat cgaatacaat aagctgaaaa
     4141 atttgctgac cgcttattat tatgatgaag tacacagaca gatacccgga ctaatgtttg
     4201 ctcttcaaaa tggacatgca gatgctatac gcgcatacgg tgagctcatt cttagccctc
     4261 ctctcctcaa ctcagaggat attgtaaatt tgctggcctc aaggagatat gacaatgttc
     4321 ccggacttct gttagcattg aataatggac aggctgatgc aatcttagct tatggtgata
     4381 tcttgaatga ggcaaaactt aacttggata aaaaagcaga gctgttagaa gcgaaagatt
     4441 ctaatggttt atctggattg tttgtagcct tgcataatgg atgtgtagaa acaattattg
     4501 cttatgggaa aatacttcac actgcagacc ttactccaca tcaggcatca aaattactgg
     4561 cagcagaagg cccaaatggg gtatctggat taattatagc ttttcaaaat aggaattttg
     4621 aggcaataaa aacttatatg ggaataataa aaaatgaaaa tattacacct gaagaaatag
     4681 cagaacactt ggacaaaaaa aatggaagtg attttctaga aattatgaag aatataaaaa
     4741 gctgaatatt atctcgtggt gatacactga atttgaggta accggctcat ttaaaccgtc
     4801 tggtctgtta cctccggttc cacaaaaata atgtccatca ttttgaagtg gacactatcg
     4861 tatggaatac cggacctgga tcactgaagc tttacgcctt catttcgaag aacatttacc
     4921 acgggttgtg gccggacgtc gcctgggcgt accaaaatca actgtctgtg gtatgttcgt
     4981 gtgaaccgcc ccgggtttcc tggagagtgt tttatctgtg aaccacggca gcctgacggc
     5041 tgcaaatcgg ggtgtggcag aatatgagct ttcagagtaa ccatccagaa tgagttccca
     5101 tgtcacacaa cctggagcac cagaaagtcc acaccagaat ggtgaaagag gttctgaaag
     5161 ccgtcgccag agccaataat cacccttata agtccgtatt tgcagacttt atcaccggtc
     5221 atccctcctg cacggtctgt ttctgggaaa ccttccacaa aatgtacccg gattcaccgt
     5281 acgaatacgt cacgttctgc catacctgcc gtcgttttga tttatacgaa acagaagcgg
     5341 agatgaaggc ggatgacccg aagtggtggt gattttcagc cccgaccgct gaaacgcctg
     5401 ttcacagcca accagtgctg gac
//
LOCUS       DAJVTL010000203         5403 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.205, whole genome shotgun sequence.
ACCESSION   DAJVTL010000203 DAJVTL010000000
VERSION     DAJVTL010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.205"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            198..857
                     /locus_tag="OQQ26_004108"
     CDS             198..857
                     /locus_tag="OQQ26_004108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HCS1859361.1"
                     /translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGERETGKSAIGAGLSSL
                     VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
                     GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
                     NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
                     L"
     gene            961..1935
                     /gene="ghrB"
                     /locus_tag="OQQ26_004109"
     CDS             961..1935
                     /gene="ghrB"
                     /locus_tag="OQQ26_004109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HCS1859362.1"
                     /translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
                     EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
                     VADTLMALELSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
                     GAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
                     MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
     gene            complement(1985..2695)
                     /locus_tag="OQQ26_004110"
     CDS             complement(1985..2695)
                     /locus_tag="OQQ26_004110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HCS1859363.1"
                     /translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
                     VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAYSALKQSDDLKPVFDQAFTKVVTTP
                     ADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
                     AQHQAFNQAWTTAVTATQ"
     gene            3129..3419
                     /locus_tag="OQQ26_004111"
     CDS             3129..3419
                     /locus_tag="OQQ26_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HCS1859364.1"
                     /translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
                     TGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
     gene            3700..3912
                     /gene="cspA"
                     /locus_tag="OQQ26_004112"
     CDS             3700..3912
                     /gene="cspA"
                     /locus_tag="OQQ26_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HCS1859365.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(4100..4252)
                     /gene="hokA"
                     /locus_tag="OQQ26_004113"
     CDS             complement(4100..4252)
                     /gene="hokA"
                     /locus_tag="OQQ26_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokA"
                     /protein_id="HCS1859366.1"
                     /translation="MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYELAAFL
                     ACNLKE"
     gene            complement(4354..5403)
                     /locus_tag="OQQ26_004114"
                     /pseudo
     CDS             complement(4354..5403)
                     /locus_tag="OQQ26_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611947.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT         1444 a         1301 c         1255 g         1403 t
ORIGIN      
        1 gtgggcggca gtcagaacgg aatatcgtga ggatgagttg gccaaaccga agactcctga
       61 aaggttagat gtattgagca gttaaatatt acttacaaat ttccgagtat tcccaggaat
      121 aatcttcatg ttcacgcggc ataatctccc gccacggaac ccgtggcaaa gaataaaaag
      181 gttattaagg attaacaatg aagaaacgtg tttatcttat tgccgccgta gtgagtggcg
      241 ctctggcggt atctggctgc acaactaacc cttacaccgg cgaacgcgaa acaggtaaat
      301 ctgctatcgg cgcaggtctg agctctctcg tgggcgcggg tattggtgcg ctctcttctt
      361 cgaagaaaga tcgcggtaaa ggcgcgctga ttggcgcagc agcaggcgca gcgctgggcg
      421 gcggcgtggg ttattacatg gatgtgcagg aagcgaagct gcgtgacaaa atgcgcggca
      481 ctggtgttag cgtaacccgc agcggggata acattatcct caatatgccg aacaatgtga
      541 ccttcgacag cagcagcgcg accctgaaac cggcgggcgc taacaccctg accggcgtgg
      601 caatggtact gaaagagtat ccgaaaacgg cggttaacgt gattggttat accgacagca
      661 cgggtggtca cgacctgaac atgcgtctct cccagcagcg tgcggattcc gttgccagcg
      721 cgttgatcac ccagggcgtg gacgccagcc gcatccgtac tcagggcctt ggcccggcta
      781 acccaatcgc cagcaacagc accgcagaag gtaaggcgca aaaccgccgt gtagaaatta
      841 ccttaagccc gctgtaatcc ctttcatgcc aggtgatgca gaaatcacct ggcattcttc
      901 agttttcctt cattatattt caggctaagg tgatcgcctt atcagttaat ggagagaagc
      961 atgaagccgt ccgttatcct ctacaaagcc ttacctgatg atttactgca acgcctgcaa
     1021 gagcatttca ccgttcacca ggtggcaaac ctcagcccac aaaccgtcga acaaaatgca
     1081 gcaatttttg ccgaagctga aggtttactg ggttcaaacg agaatgttga tgccgcattg
     1141 ctggaaaaaa tgccgaaact gcgtgccaca tcaacgatct ccgtcggcta tgacaatttt
     1201 gatgtcgatg cgcttaccgc ccgaaaaatt ctgctgatgc acacgccaac cgtattaaca
     1261 gaaaccgtcg ccgacacgct gatggcgctg gagttgtcta ccgctcgtcg ggttgtggag
     1321 gtagcagaac gggtaaaagc aggcgaatgg accgcgagca taggcccgga ctggtacggc
     1381 actgacgttc accataaaac actgggcatt gtcgggatgg gacggatcgg catggcgctg
     1441 gcacaacgtg cgcactttgg cttcaacatg cccatcctct ataacgcgcg ccgccaccat
     1501 aaagaagcag aagaacgctt caacgcccgc tactgcgatt tggatacact gttacaagag
     1561 tcagatttcg tttgcctgat cctgccgtta actgatgaga cgcatcatct gtttggcgca
     1621 gaacaattcg ccaaaatgaa atcctccgcc attttcatta atgccggacg tggtccggtg
     1681 gttgatgaaa atgcactgat tgctgcattg cagaaaggcg aaattcacgc cgccgggctg
     1741 gatgtcttcg aacaagagcc actgtccgta gattcgccgt tgctctcaat ggccaacgtc
     1801 gtcgcagtac cgcatattgg atctgccacc catgagacgc gttatggcat ggccgcctgt
     1861 gccgtggata atttgattga tgcgttacaa ggaaaggttg agaagaactg tgtgaatccg
     1921 cacgtcgcgg actaagccac gactgcgtgg agtaaagccc gataatcgct cgggctttta
     1981 ctctttattg ggttgcagta actgctgtag tccaggcctg attaaacgcc tgatgctgtg
     2041 ccggtaacgg cgcaatcagt ttgttatatt cacttgcctg ctgtgaagtc gggaactgga
     2101 tgccatttgc tacaaagctc acctgagtac cttgttgggc aatgtagtct ccaaccatca
     2161 ctagttgttg cgtgaaagtt tgtgccgccg gaatcaacgg ttgcaatgca tcagctggcg
     2221 tcgttaccac tttggtgaat gcctgatcaa agaccggttt caggtcatca ctctgtttta
     2281 gcgcagagta cgcagcatcg gcctgcaact tcgcattttg cagttgttgc gccagcacac
     2341 ccagcgaacc attcatttca cgcagcggac cgctttgcgt aacgtaatcc tgcggtacgc
     2401 gaattgcgtt aacgctgtct acaaccgggc gcagaccgga atccatcgcc tgattcacct
     2461 gctgagaata accatacaga atcgcgtaat cagagacaaa aggaccaaac tgttttttct
     2521 gatcggcagt cagggttggt agacgttcac cgctacgcat cactgtattc tgcaggaagt
     2581 cgataaacgc tttacgctga tcgccttctt tatcaaaaca cccactcagg ctaactacca
     2641 ttaataacgc tgcaagaggc gcaaaccagc gagagcagga ctttcctgtc gccattttct
     2701 tactcctttc acccaaaaaa aagcgcacaa cgacacacgc gtgtctgacg tgacaaggat
     2761 agtccaggac aggcttgcag gatacccttt ctacgtaatc ttcctggtaa aatcatggag
     2821 aaaatgaaac aaggttaatt tgttgtttca ttgttaaaaa atgatattgc cgttgctttt
     2881 ttgtagcccg agatttacgc cttcgcagaa ctttagattt tcgaaatctt tacaaaccgg
     2941 gagtggtaag aaatatatcg gcatttatca gatcgttagg tggctataag tcacgctaaa
     3001 tgactggctg aatcgaatca tagccagagc atgccctgac ttcaccccgc tgtgtctgct
     3061 tttcccgact attcttaatg agcttcgatg caattcacga tcccgcagtg tgatttgagg
     3121 agttttcaat ggaatataaa gatccaatgc atgagctgtt gagcagcctg gaacagattg
     3181 tttttaaaga tgaaacgcag aaaattaccc tgacgcacag aacaacatcc tgtaccgaaa
     3241 ttgagcagtt acgaaaaggg acaggattaa aaatcgatga tttcgcccgg gttttgggcg
     3301 tatcagtcgc catggtaaag gaatgggaat ccagacgcgt gaagccttca agtgccgaac
     3361 taaaattgat gcgtttgatt caagccaacc cggcattaag taagcagttg atggaataga
     3421 cttttatcca ctttattgct gtttacggtc ctgatgacag gaccgttttc caaccgatta
     3481 atcataaata tgaaaaataa ttgttgcatc acccgccaat gcgtggctta atgcacatca
     3541 acagtttgac gtacagacca ttaaagcagt gtagtaaggc aagtcccttc aagagttatc
     3601 gttgataccc ctcgtagtgc acattccttt aacgcttcaa aatctgtaaa gcacgccata
     3661 tcgccgaaag gcacacttaa ttattaaagg taatacacta tgtccggtaa aatgactggt
     3721 atcgtaaaat ggttcaacgc tgacaaaggc ttcggcttca tcactcctga cgatggctct
     3781 aaagacgtgt tcgtacactt ctctgctatc cagaacgatg gttacaaatc tctggacgaa
     3841 ggtcagaaag tgtccttcac catcgaaagc ggcgctaaag gcccggcagc tggtaacgta
     3901 accagcctgt aatctctgct taaaagcaca gaatctaaga tccctgccat ttggcgggga
     3961 tttttttatt tgtttttcag gaaataaata atcgatcgcg taataaaatc tagtattatt
     4021 tttgtgaaaa ataaatttgg gtgcaatgag aatgcgcaac gccgtaagaa aggcgggaat
     4081 aacttcccgc cgaagactct tactctttta aattgcaggc taaaaatgcc gccagctcat
     4141 aactcccctg tttaatatgc aattcacaca gtgaatctct tatcatccag gtgaaaaata
     4201 aaagcgtgaa acaaatcact attaaagaaa gtaatctata tttctgcggc attcccagcc
     4261 ccctgtgttg atttccaacg agtaagaggc taaccttatg gtgttcaggc ataggggagc
     4321 ctcactttgt actgacccca aaaagttgga cagttaaaca cgaggcatat aggtctgatt
     4381 ccgatattca attggagtca gaccttttaa tttcaggcta attcttctgc tgttgtagta
     4441 ttcaatatat tccgtaacag catccttcag ttcgcttata ttactgaact catcaagata
     4501 aaaacactcc gattttaagg ttccaaagaa acactccacc acagcattat ccagacaatt
     4561 gccttttctg gacatgcttt gtttaatacc atgttcttta aggatatttt gatatcttct
     4621 catacgatac tgccatccct ggtcagagtg cagaacagga tgctcgtgag gattaagctt
     4681 tttgaatgcc tgatcgagca tattctcgac catgttcatc actggtcttt ccgaaaggct
     4741 gtaagaaata acttcgttgt tgaagagatc tattactgga gacaaataca gcttgcgccc
     4801 attgactgca aattcagtaa aatcggtaac ccacttctcg tttggccgcg tagccttgaa
     4861 atctctttgg agaacattgg gggcggtttg ccctacctct cctctgtaag agcggtatcg
     4921 cttgacttta atcgctgcct taagtgagag gattcccatc aggcgctgaa cagctttatg
     4981 gttaatctgt ttcccttctc gatgaagaga cagcgttacc ctacggtatc cgtatcggcc
     5041 tctattctca tgataaatct caccaatacg ctttttaacg tccgcatact tgtcaggctt
     5101 gctgagagcc tttagatggt aataaaacgt actgcgcggt atctccgcag ccctgagaag
     5161 ctcatcaaga ggataaaact gccttagctc gttgagtact ttcacttttt cgtgggatga
     5221 gctaaggctt tcagcttttt tagatacaca agccgcgttt caagaaatcg aacttgcctt
     5281 tcaagatcct caatgcgtcg gtcttttgac agctccaatg ctgatgccgc tttttctgga
     5341 tcaactgata ttgcaatgtt tcttttggtg ccaatcttga gcgcgcgtaa accagcttct
     5401 ccg
//
LOCUS       DAJVTL010000204         5380 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.206, whole genome shotgun sequence.
ACCESSION   DAJVTL010000204 DAJVTL010000000
VERSION     DAJVTL010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5380
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.206"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            90..1438
                     /locus_tag="OQQ26_004115"
                     /pseudo
     CDS             90..1438
                     /locus_tag="OQQ26_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291189.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
     gene            1428..2315
                     /locus_tag="OQQ26_004116"
                     /pseudo
     CDS             1428..2315
                     /locus_tag="OQQ26_004116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309103.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
     gene            2456..3055
                     /gene="yihX"
                     /locus_tag="OQQ26_004117"
     CDS             2456..3055
                     /gene="yihX"
                     /locus_tag="OQQ26_004117"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709685.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HCS1859367.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGETF
                     HQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD
                     TVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC"
     gene            3049..3921
                     /locus_tag="OQQ26_004118"
     CDS             3049..3921
                     /locus_tag="OQQ26_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HCS1859368.1"
                     /translation="MLKTIQDKARHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSL
                     LSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNKMT
                     AVGACGLIVTALLLMYSIDSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAI
                     SSYLLSLRWASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAA
                     LLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYR
                     KLKQAAEQEEDDEP"
     gene            3918..4355
                     /gene="dtd"
                     /locus_tag="OQQ26_004119"
     CDS             3918..4355
                     /gene="dtd"
                     /locus_tag="OQQ26_004119"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HCS1859369.1"
                     /translation="MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANR
                     LCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRA
                     EALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV"
     gene            4400..5338
                     /gene="fabY"
                     /locus_tag="OQQ26_004120"
                     /gene_synonym="yiiD"
     CDS             4400..5338
                     /gene="fabY"
                     /locus_tag="OQQ26_004120"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HCS1859370.1"
                     /translation="MYHLRVPQTEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAHH
                     QMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGVK
                     RVICSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQL
                     QQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHYTLFAGSLFSLATLTGWGL
                     IWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQ
                     VEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE"
BASE COUNT         1226 a         1287 c         1427 g         1440 t
ORIGIN      
        1 catcggctta aaccgatgcg cattaattca aactgcccac gtttagtggt tcgtatccca
       61 gatttctcgc ctaccaggag aggaaaatta tgtctgaaaa gttacccgca ctgcgtgaag
      121 ggctttccgg taaagccatg agacgtgtcg ttatgggcag tttcgcaggc gcgttaatgg
      181 aatggtatga cttctttatt tttggcacgg cagcaggact ggtatttgca ccgctgtttt
      241 atccagacat cgatcctttt ataggtctta tagcttcctt tgcgaccttt ggtgtcggtt
      301 ttctgactcg tcctttaggt ggcatcgtct ttggtcattt tggcgataaa atcgggcgaa
      361 aaataacact tatctggacg ctggctattg tcggttgctc cacatttttg attggtttta
      421 ttccgacgta tcaggaaatt ggcatttggg caccgcttgt attaatggtg ctgcgtttga
      481 ttcagggctt tggtcttggt ggcgagtacg gcggagcggc attgatgacc atagaatcag
      541 cgcccgaatc ccgacgcgga tttttaggtt cactcccgca aacggctgcg tctgtgggta
      601 ttatgctggc aaccggtatt tttgctctct gtaaccattt tcttacttcg gagcagtttc
      661 tctcctgggg atggcgcatt ccgttttggc tttctgcggt gatgttgatc gttgggctgt
      721 ttatccgcct gcataccgaa gaaacgctgg attttcaaaa gcaaaaaacg acgaataata
      781 aagaaaagtc cgttcctccg ttgattgaat tattcaaaaa acatccacga aatattttat
      841 tggcactgga tgcgaggctg gcggaaagtg tctcctctaa tattattaac gcctttggta
      901 ttgtctatat ttccagccaa ttagcattgt cgcgagatat tcccctgacg ggtatgttga
      961 ttgcctcggc gatcggtatt ttcagttgtc cattggttgg atggttatca gatcgtatag
     1021 gtcaaaaaag tctgtatttg tcgggagcag gattttgtgt cctgttcgcg tttcctttct
     1081 tcttattact ggatagcaaa agtacgctca tcatctggtg cagtattatc ctcggctaca
     1141 acttaggtcc gacgatgatg tttgccgtgc agccaacact tttcacccgc atgttcggta
     1201 ccaaagtacg atataccggc ctttcttttg cttatcaatt ttccgcgatt cttggcggac
     1261 taagccccct tatcgcctca agtttgctgg tgctaggggg aggaaaaccg tggtatgtcg
     1321 ctctgttttt atttgctgtc tcagttcttt cctttgtttg cgtctggctg attgagcgac
     1381 cgatgaacaa gaaaccgctt cttaccgcta catcagggaa caatctcatg aaaactgaac
     1441 gaaaaaacga gcattacctg gcgctacaac aggcgtttga cgcgccatgg cctgggcctg
     1501 taggagagtt agtgacgctg gaaaaaggca atattcacct gcagatttat ccgcatgatg
     1561 gtgccaggat aacctcgtta aaggcatttg gttctgaagt attacgccaa tggcagccgc
     1621 agcgcagagc ttttcagtat ggctgtttcc caatggtgcc gtgggcaggg cgactgggga
     1681 atgcgacgct gaatgctggt gggcaatgtt attctttacc cgccaataaa ccaccacatg
     1741 cgttgcatgg tatggcttgt tactcaacgt gagaaatcat cgacaaaaca gtagattccc
     1801 tgactttacg tatgcccctg gcttcaccgt ggccctggca aggggaagtg attcagactt
     1861 ttttgctgga gaacgatgcg ctggttttgc aactggaagt ccattcatat gccgatacat
     1921 tcccggcctc cgcaggctgg catccgtggt ttgcgaaaaa gctgactccg caaaatacag
     1981 aatcgttgca ggtgcttttt gatgcggact ggcaagaaga agcgggtagt gatgaactgc
     2041 caactggaaa tcgtatctct cctcaagccg gtccctggga tgactgtttt ggtttttatg
     2101 acggggtgaa ggttaagtta ctgtggcctg gtaaactcgc gatgaccatg atctcttctg
     2161 caaacagtct ggtggtattt gataaacagc ccgatgccac ctgtattaac ccgctgactc
     2221 aggcacctaa cgcaataaat ctaacgccgg aattggtgac accagatagg ccgctggtca
     2281 tcgaaactcg ttggcaattt acacctgaat cttaaccatt catctattgc gaaaaagcca
     2341 gtgaaattac tctgcttttt cgcaatcagc atcacaagat tacccttatt gccacatagc
     2401 caaacccatc ctttcccgct acagttaatt tcttgtggcg cgaaaggagg caaaaatgct
     2461 ctatatcttt gatttaggta atgtgattgt cgatatcgac tttaaccgtg tgctgggagc
     2521 ctggagcgat ttaacgcgta ttccgctggc atcgcttaag aagagttttc atatggggga
     2581 gacgtttcat cagcatgagc gcggggaaat tagcgacgaa gcgttcgcag aggcgctgtg
     2641 tcatgagatg gctctaccgc taagctacga gcagttctct cacggctggc aggcggtgtt
     2701 tgttgcgctg cgcccggaag tgatcgctat catgcataaa ctgcgtgagc aggggcatcg
     2761 cgtggtggtg ctttccaata ccaaccgcct gcataccacc ttctggccgg aagaataccc
     2821 ggaaattcgt gatgctgctg accatatcta tctgtcgcaa gatctgggga tgcgcaaacc
     2881 tgaagcacga atttaccagc atgttttgca ggcggaaggt ttttcaccca gcgatacggt
     2941 ctttttcgac gataacgccg ataatataga aggagctaat cagctaggca ttaccagtat
     3001 tctggtgaaa gataaaacca ccatcccgga ctatttcgcg aaggtgttat gctaaaaacc
     3061 attcaggaca aagccaggca ccgtacccgt ccgctatggg cctggctgaa actactctgg
     3121 caacgcattg atgaggacaa tatgacaacc ctggcaggta accttgccta tgtgtcgttg
     3181 ctctcattag tgccgctggt tgccgttgtt tttgcgcttt tcgccgcttt tcccatgttt
     3241 tccgacgtca gcattcagtt gcgtcacttt atttttgcca actttctgcc tgctactggc
     3301 gatgttattc agcggtatat cgaacaattt gttgccaatt ccaacaagat gaccgccgtt
     3361 ggcgcgtgcg ggctgatcgt caccgcgtta ttgttgatgt actccatcga tagcgcgttg
     3421 aataccatct ggcgcagtaa acgagcgcga ccaaaaattt actcgtttgc cgtgtactgg
     3481 atgattttaa cgctggggcc gctgctggca ggggccagtc tggcgatcag ttcctatttg
     3541 ctctccctgc gctgggcgag cgatctcaat actgtcatcg acaatgtgct gcgtattttt
     3601 ccgctgctgt tgtcgtggat ctccttctgg ttgctgtaca gcattgttcc taccatccgc
     3661 gtacctaacc gcgacgcgat tgtcggcgcg tttgttgctg cactcctgtt cgaagcagga
     3721 aagaaaggtt tcgcgcttta tatcaccatg ttcccgtcat accagctcat ttacggcgtg
     3781 ctggcggtga tccccattct ctttgtttgg gtctactgga catggtgtat cgtcttgctt
     3841 ggcgcggaaa ttactgtcac tctcggggaa taccgcaaac taaaacaagc tgctgaacaa
     3901 gaagaagacg acgaaccatg attgcattaa ttcaacgcgt aacccgtgcc agcgtcaccg
     3961 tggagggaga agtgacgggc gaaattggcg cgggactttt ggtgttattg ggtgtcgaaa
     4021 aggatgacga cgaacagaaa gcaaaccgtc tgtgcgagcg tgtgctcggc taccgcatct
     4081 ttagcgatgc cgaaggcaag atgaatctca acgtgcaaca ggcgggcggc agtgtgctgg
     4141 tggtttccca gtttaccctc gccgcagata ccgaacgggg gatgcgccca agtttctcca
     4201 aaggtgcatc accggatcgc gcagaggcgt tatatgacta tttcgtcgaa cgctgccgtc
     4261 agcaagagat gaacacgcaa acaggacgct tcgctgcgga tatgcaggta tcgctggtca
     4321 atgatggccc cgtgacattc tggttgcagg tatgagccag cttccagggt tgtcacggga
     4381 aacaagagag agtatcgcta tgtatcacct tcgggttcca caaacagaag aattagagcg
     4441 ttactatcag tttcgctggg aaatgttgcg taagcccctg catcaaccaa aaggttcgga
     4501 acgcgacgcg tgggatgcga tggcgcatca ccagatggtc gtcgacgagc agggtaatct
     4561 ggtggcggta ggccgattgt atattaatgc cgacaatgaa gcgtccattc gctttatggc
     4621 cgttcacccg gacgtgcagg acaaagggtt aggaacgctg atggcgatga ccctggagtc
     4681 ggtggcgcgt caggaaggcg ttaagcgcgt gatctgtagc gcccgtgaag acgcggtgga
     4741 gtttttcgcc aagctggggt ttgttaatca gggggagatc accacgccaa ccaccacgcc
     4801 gattcgccat tttttgatga ttaagcccgt cgccactctg gatgatattt tgcatcgcgg
     4861 cgactggtgc gcgcagctgc aacaggcgtg gtacgaacat atcccgctta gtgaaaaaat
     4921 gggcgtgcgc attcagcaat ataccgggca aaaatttatc actaccatgc cagaaaccgg
     4981 caatcagaat ccgcactata cgctgtttgc cgggagttta ttctcactgg cgacgctcac
     5041 cggttggggg cttatctggc tgatgctgcg cgaacgccac ctcggcggaa cgattattct
     5101 ggcggatgcg catatccgct atagcaaacc gattagcggt aaaccccatg cggtagccga
     5161 cctcggtgcg ttaagcggcg atctcgaccg tctggcacgc gggcgcaaag cgcgggtgca
     5221 aatgcaggtc gaaatctttg gcgacgagac gccgggtgca gtgtttgaag gcacgtatat
     5281 cgttctgccc gcgaagccat ttggcccgta tgaagagggc gggaacgaag aagagtagct
     5341 gatggagagg ggcggtgctg cctctctcat tcaggtcatt
//
LOCUS       DAJVTL010000205         5364 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.207, whole genome shotgun sequence.
ACCESSION   DAJVTL010000205 DAJVTL010000000
VERSION     DAJVTL010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5364
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.207"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..783)
                     /locus_tag="OQQ26_004121"
     CDS             complement(<1..783)
                     /locus_tag="OQQ26_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1859371.1"
                     /translation="MKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGA
                     ATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPP
                     SLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPD
                     LPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRL
                     PELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTR"
     gene            875..961
                     /locus_tag="OQQ26_004122"
                     /pseudo
     CDS             875..961
                     /locus_tag="OQQ26_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869530.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1346..2419)
                     /locus_tag="OQQ26_004123"
     CDS             complement(1346..2419)
                     /locus_tag="OQQ26_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1859372.1"
                     /translation="MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIA
                     ITEAIQANIELLSDSGRESLIDRIKGADSITLHAWLDRYETILSERGIRPKTLLDYAS
                     KIRAIRRKLPDKPLTDISTKEVAAMLNTYVAEGKAASAKLIRSTLVDVFREAIAEGHV
                     ATNPVTATRTAKSEVRRSRLTANEYVEIYHAAEPLPIWLRLAMDLAVITGQRVGDLCR
                     MKWSDINDNHLHIEQGKTGAKLAIPLTLTIDALNISLVDTLQKCREASSSETIIASKH
                     HDPLSPKTVSKYFTKARNASGLSFDGDPPTFHELRSLSARLYRNQIGDKFAQRLLGHK
                     SDSMAARYRDSRGREWDKIEINK"
     gene            complement(2397..2615)
                     /locus_tag="OQQ26_004124"
     CDS             complement(2397..2615)
                     /locus_tag="OQQ26_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001325331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase"
                     /protein_id="HCS1859373.1"
                     /translation="MYLTLQEWNARQRRPRSLETVRRWVRECRIFPPPVKDGREYLFH
                     ESAVKVDLNRPVTGSLLKRIRNGKKAKS"
     gene            complement(2700..3356)
                     /locus_tag="OQQ26_004125"
     CDS             complement(2700..3356)
                     /locus_tag="OQQ26_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000211406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HCS1859374.1"
                     /translation="MATQISVESLSPITYNHIPVITTELLARLYGTETNNIKVNYTRN
                     AGRFVCGKHYFKLEGGELREFKNKVTHSNLVAPRAKHLILWTERGAARHAKMLETDQA
                     WEVFEKLEDCYFSPGKAEQHPQIQQQFTDEEIILLCYMQVQMENALDICKRLYPILKE
                     LNSSYTSKLYNIAFETFYTVTKNRDVLLREATRLDQASALFERAKPMLKSLRARQFEF
                     "
     gene            complement(3682..4464)
                     /locus_tag="OQQ26_004126"
     CDS             complement(3682..4464)
                     /locus_tag="OQQ26_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001095964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HCS1859375.1"
                     /translation="MNTQISVETLSPITYKQTNVITSELLAQLYGTDVVRIRQNHHEN
                     KSRFVEGVHFYKVVGDELRALKHKVALNYFVKIAPNARHLILWTERGAARHAKMLETD
                     QAWDVFEKLEDGYFNQREKVANHPQPVPQPESSLDRARAMEIALNMADRLVNMFPNLS
                     SESKQAAVAGVFNPIVGRDVVPLPAISEHYYSATEVGQRYGISANKVGRIANTYMLKT
                     EKYGKWFIDKSAHNDKQVETFRYNEARVHKIEELIEGERKAA"
     gene            complement(4607..4849)
                     /locus_tag="OQQ26_004127"
     CDS             complement(4607..4849)
                     /locus_tag="OQQ26_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1859376.1"
                     /translation="MFALIQRGQIYTDSAGYPVKIIRSTDHSVFFKRMDGYPGRVCIR
                     KFNNLFEHIDHREYHQILAETEQENHLKKLRAMQRR"
     gene            complement(4934..5329)
                     /locus_tag="OQQ26_004128"
     CDS             complement(4934..5329)
                     /locus_tag="OQQ26_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000787529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859377.1"
                     /translation="MDDNSDNVITLVQPKSEEEGLLNVVITDRKSVEQKCCQHIRTTI
                     SEVNRTITCNRCGLALDPFELVLDRARNGENIVSEIKSLYAKRDALREAVAKLEREEK
                     NAKARLRAARTAILYAENDLKNIEREVNQ"
BASE COUNT         1234 a         1217 c         1283 g         1630 t
ORIGIN      
        1 gcgagtcgac aatggattgt tataaatatt aacatctgca taaatgtgca gattcatgat
       61 actgtctggc aatgtgttca gctgattgtt agggatatat agtgattgca gacgttgtgg
      121 aagttcgggc agtctgtgta gttggttttc cccaacgttt aaaagcctca gattttgagg
      181 aaggggcggt agctcttgta atctgttatc aaaagcactt agttcctgta gttcacatgg
      241 taattctggt aaggcagtaa gctggttgtt gccaacagaa agtttttgta gagccggggg
      301 aagatcaggt agcgtctcca ggctattgag aagggctgag agtgactgca aggaagatgg
      361 aagagaaggc aaacatgtta aaactctgtt aagtgaaaca tcaagagcga ccaggtgagg
      421 cggaagagcc gggagcctgc tcagtctgtt atcgctggct ttaagtacag ttaaggacgg
      481 agggagttct ggcagagagc gtagctcatt gctagagatg ttaagttctt gtatgtgcgg
      541 gggcaggtat gggagagagc gtaatctgag taaacttaaa ttgagggctg gctcttgaaa
      601 agccagacat attttcagta atcgaactgc ctgtgttcgg tcttctgttg cagcaccttc
      661 cttggcccag ttatcccaga tgcggtgata atccgtgata ttttgctctt ctacggataa
      721 acgggatata catcctaaac cacaaaagga gcggaaaaaa gaaggattgt gggcaggttt
      781 catttattat tgatcctcat tgtttatata ttaatatgtt cgtgcaaatg gagtgaggat
      841 tctttaaaaa aacgcgcctg taaatagtta agaacaggaa gaactgttgg ggatgtggct
      901 ggccgaaaat gaaggggtga agttctggct caatgtgctg actgaactga aaaaacgcgg
      961 ttggtcgccc taccttttca tcaagccagt agtctgccca ccacagcatc atttctctgc
     1021 gcttatcgag atactgagca tggttgtaaa ttcagctaac ccagtgcgtt gacaaaaaat
     1081 tagcgcaaga ggacaaaaaa tcaccttgcg ctaatgctct gtatcaggtc actaatgcca
     1141 gctaagtagt tgatttatag tgactgcata tgttgtgttt tgtcgcattt tgtagtctgt
     1201 tatttaaccg cagattcgtg taatgcgatg atttttaagt gatttatatt attttgtcat
     1261 ccttcaataa ggaaagttgc acatttaaaa tctctttaat tatcaataaa ctacaatgta
     1321 caggtcatta ttagtcaaaa taaaattatt tgttgatttc aattttgtcc cattctctcc
     1381 ctcggctgtc cctataccgc gccgccattg aatctgattt atgcccgaga agacgttgag
     1441 caaatttatc gccaatctgg ttccggtata gcctcgctga caggctacgc agttcatgga
     1501 atgttggcgg gtctccatca aatgagagtc cggaggcatt tctcgccttt gtaaaatact
     1561 ttgatactgt tttcggggaa agcggatcgt gatgctttga tgcgattata gtttcactgc
     1621 tgctggcctc cctgcatttc tgtagtgtat caaccagtga gatattgagc gcgtcaatcg
     1681 ttagcgtcag cggaatggcg agcttagccc ctgttttacc ctgctcaatg tgaagatggt
     1741 tgtcgtttat gtctgaccac ttcattctgc ataaatcgcc cactctctgc cctgtaatga
     1801 cggccaaatc cattgccagc ctcagccaga tagggagagg ttcggctgca tggtaaatct
     1861 cgacatactc attagctgtc agccttgagc gccttacttc tgactttgct gtgcgggttg
     1921 ctgttaccgg attcgtagcc acatgcccct cggctattgc ttcacgaaaa acgtcaacaa
     1981 gggttgacct gattaatttt gcggaagccg ctttaccttc tgctacgtag gtatttagca
     2041 ttgctgccac ctctttcgtt gatatgtcag tgagcggttt gtccggcaat tttcttcgaa
     2101 ttgccctgat tttgctggcg tagtcgagta gagttttcgg tctgatgccc ctctcgctga
     2161 ggattgtttc atatcggtca agccacgcat gaagggtgat tgagtcagcg cctttaatcc
     2221 tgtctatcag tgactcgcgc ccgctgtctg atagcaactc aatgttggcc tgtattgctt
     2281 cagtgattgc tatcctcctg tctcggccta atccgaactc tttacccgtc cttgggtccc
     2341 tgtagcagta atatccattg tttcttatat aaaggttagg gggtaaatcc cggcgctcat
     2401 gacttcgcct tcttcccatt tctgatcctc ttcaaaaggc tacctgttac tggtcgattt
     2461 aagtcaacct ttaccgctga ttcgtggaac agatactctc ttccatcctt aaccggagga
     2521 gggaatatcc tgcactcgcg tacccatcga cgaactgttt caaggctcct tgggcgtcgc
     2581 tggcgtgcgt tccactcctg aagtgtcaag tacatcgcaa agtctccgca attactcgca
     2641 agggagcgag tattggttta ttttctccaa caaaaaagga gccgaagctc ctttgatgat
     2701 taaaattcga attgtctcgc ccgaaggctt ttcagcattg gttttgcccg ttcgaaaagg
     2761 gcgcttgctt ggtcaagtcg tgtcgcctcc cttagcagta catctctgtt tttcgtcacc
     2821 gtgtaaaaag tttcaaacgc gatgttatac agcttgctcg tgtatgatga gttcagttcc
     2881 ttcaatatcg ggtacagacg tttgcagatg tccagcgcat tctccatctg tacctgcata
     2941 tagcaaagga ggatgatttc ttcgtctgtg aattgctgct ggatctgcgg gtgctgttcc
     3001 gctttgcccg ggctgaaata gcagtcttcc agtttttcga acacttccca cgcctgatcg
     3061 gtttcgagca tttttgcgtg gcgggctgcg cctcgttctg tccagaggat gaggtgcttt
     3121 gctcgcggtg caactaagtt actgtgagta accttgttct taaattcccg caattcacca
     3181 ccctccagtt taaagtagtg cttaccacaa acaaaacgcc cggcattgcg cgtatagttc
     3241 actttaatgt tgttggtctc agtgccgtaa agtcgtgcca gtagttcggt agtgatgacg
     3301 gggatgtggt tataggtaat tggggaaagg gattcaacag aaatttgagt agccatggtt
     3361 ttatgtccta tcgcatattt tgaattcacc ccttttgaga gggtggtcgg gcgctcaaaa
     3421 ccggcgatag acggcgggca tatttccctt gcgggtgttt tattagccgc acgcccgacc
     3481 attgaattct caatgtcgta gacataaaaa aatccgcata actgacgggg cggtttccgc
     3541 tatcgcaaag gtgttttgag caccatgaag cggaatatag ccccgttaat gcggtgttgt
     3601 caaatcatgt aggccttatc ttgctgtaag ccgcgccatt cgggcttttc cccacatttg
     3661 gggaaaacta tcttgtcaaa atcatgcagc ctttcgctct ccttcgatga gttcctctat
     3721 tttgtgcact ctagcctcgt tgtaccgaaa tgtttcaacc tgcttgtcat tgtgcgccga
     3781 tttgtcgatg aaccacttcc cgtacttttc tgttttgagc atgtaggtgt tggctatacg
     3841 tcctaccttg ttggctgaaa taccgtagcg ctggccgact tccgtagcag agtagtagtg
     3901 ctctgagata gctggcaggg gtacaacatc gcgaccaaca atcgggttga acactccagc
     3961 tactgctgcc tgctttgatt ctgaggacag attcgggaac atattcacca gtcgatccgc
     4021 catgttcaaa gctatttcca tggctcgcgc acggtctagg ctactttctg gttgcggtac
     4081 tggttgagga tggttggcaa ccttttcgcg ctgattgaag tagccgtcct ccagtttttc
     4141 gaacacgtcc catgcctgat cggtttcgag catcttcgcg tgacgggcgg ctccgcgctc
     4201 tgtccagagg atgaggtggc gtgcatttgg ggcaattttc acaaagtagt ttaaagctac
     4261 tttgtgtttt agcgcgcgca gctcgtcacc aacgaccttg tagaagtgta ccccctcaac
     4321 aaagcgcgac ttgttttcat gatggttttg ccggatgcgc acaacatccg ttccgtacaa
     4381 ctgcgccaat agttcgctgg tgatgacgtt ggtttgtttg taggtgattg gtgaaagtgt
     4441 ttcgacagaa atttgagtat tcatagcgtc ctcacattgg cttttgcatt gaagaaagct
     4501 tgacggtgaa ctcgccgtaa cgagttcaga taaaagaaat ccccgcgagt gcgaggattg
     4561 ttattcattg ccgatattca cctttatctc aaacaccttt atcggcttat ctcctttgca
     4621 tggcacgtaa ttttttcaga tggttctcct gctctgtttc agccaggatc tggtgatatt
     4681 ctctgtgatc aatgtgttcg aataaattat tgaattttct gatgcacacc cttccaggat
     4741 agccatccat cctcttgaag aatactgagt gatcagtact acgaatgatt tttactggat
     4801 agccagcgct atcggtgtat atctgaccac gttgaatcag agcgaacatt cctttatctc
     4861 cagcggcaaa tcgaatacat catcagtgct accgccagtg cggttcctac ctctttgaat
     4921 gcttcaggcc aggtcattga ttcacctccc gctcaatatt tttaaggtca ttctccgcat
     4981 acagtatcgc tgtcctggct gctcgcaacc gcgctttggc gtttttctct tcacgttcaa
     5041 gttttgccac agcttctcga agagcgtccc gctttgcata aagtgattta atctcagaca
     5101 cgatgttttc gccgtttctc gcgcggtcga gaacaagttc gaatggatct aaagccaatc
     5161 cgcatcggtt gcaggtaatc gtacgattca cttctgaaat tgttgtacgg atatgctgac
     5221 agcatttttg ctcgacgctt tttctgtcgg ttatcacaac gttgagaagt ccttcctcct
     5281 ctgattttgg ctgcaccagg gtgataacat tatcgctgtt atcgtccatc acttcacctc
     5341 ctgcggcggt tctggtagcg gcat
//
LOCUS       DAJVTL010000206         5300 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.208, whole genome shotgun sequence.
ACCESSION   DAJVTL010000206 DAJVTL010000000
VERSION     DAJVTL010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5300
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.208"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..812
                     /locus_tag="OQQ26_004129"
                     /pseudo
     CDS             1..812
                     /locus_tag="OQQ26_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
     gene            806..1204
                     /locus_tag="OQQ26_004130"
                     /pseudo
     CDS             806..1204
                     /locus_tag="OQQ26_004130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312720.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
     gene            1330..2259
                     /gene="rbsK"
                     /locus_tag="OQQ26_004131"
     CDS             1330..2259
                     /gene="rbsK"
                     /locus_tag="OQQ26_004131"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HCS1859378.1"
                     /translation="MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALLEAQRERIANASALLMQLESPLESVMAAAKIAHQNK
                     TIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR
                     TVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALIAALLEEKPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR"
     gene            2263..3255
                     /gene="rbsR"
                     /locus_tag="OQQ26_004132"
     CDS             2263..3255
                     /gene="rbsR"
                     /locus_tag="OQQ26_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HCS1859379.1"
                     /translation="MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELN
                     YAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDN
                     SLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTG
                     DFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDI
                     ELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA"
     gene            complement(3221..4486)
                     /locus_tag="OQQ26_004133"
     CDS             complement(3221..4486)
                     /locus_tag="OQQ26_004133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1859380.1"
                     /translation="MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
                     PLAMQSAIISYTLTVAMLIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQL
                     VVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVT
                     WATWHWIFLINIPIGIAGLLYARKHMPNFTTVRRRFDITGFLLFGLSLVLFSSGIELF
                     GEKIVASWIALTVIVTSIGLLLLYILHARRTPNPLISLDLFKTRTFSIGIVGNIATRL
                     GTGCVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGI
                     TVIIGLMIAQFSLQSPAMAIWMLILPLFILGMEGTTTVEQFYYTFITMGIITVASAAM
                     FMLLKTTDGNNLIKRQRKSKPNRVPSESE"
     gene            complement(4509..5201)
                     /locus_tag="OQQ26_004134"
     CDS             complement(4509..5201)
                     /locus_tag="OQQ26_004134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HCS1859381.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELG
                     EQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQ
                     VIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKENFRRERWIEVDMAW
                     HEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAF
                     KACQALLRSPDK"
BASE COUNT         1340 a         1301 c         1366 g         1293 t
ORIGIN      
        1 tcctgttggc accggactgg gcgctgatcc cactgctgat catcgccgca ctggcgacgg
       61 taattgcctc gcaggcggtt atttctggcg tcttctcatt gacgcgtcag gcggtacgtc
      121 tgggatattt gtcgccgatg cgcattattc acacctccga aatggagtca gggcaaatct
      181 atattccgtt tgtgaactgg atgctctatg tcgcggtcgt gattgtgatt gtcagctttg
      241 agcactccag caacctggcg gcggcgtacg ggattgcggt gaccggaacc atggtactga
      301 cgtctattct ctcgactacc gtggcacgtc agaactggca ctggaataag tattttgttg
      361 cgctgatcct gattgctttc ctttgtgtcg atattccatt gttcaccgct aacctcgata
      421 aactgctctc cggcggctgg ttgccattga gcctcggtac tgtgatgttt atcgtgatga
      481 ccacctggaa gagcgagtgt ttccgcttgc tgcggcggat gcatgaacat ggtaactctc
      541 tggaagcgat gattgcttcg ctggagaaat caccgcctgt tcgcgtgccc gggaccgcgg
      601 tgtatatgtc gcgtgcaatc aacgtcattc cctttgcgct gatgcataac cttaaacata
      661 acaaggtatt gcataagcgg gtgattctgt taactctgcg caccgaagac gcgccatatg
      721 tccataacgt ccgtcgggta cagattgaac aactgtcgcc cactttctgg cgcgtggtgg
      781 caagttatgg ttggcgagaa acgccaaacg tggcgaaggc ttccagcagg ccgttgctgc
      841 tcacaagttt aatgttcttg ccagccagcc agcagatttt gatcgcacta aaggtttgaa
      901 cgtaatgcag aacctgttga ccgctcatcc ggatgttcag gctgtattcg cgcagaatga
      961 tgaaatggcg ctgggcgcgc tgcgcgcact gcaaactgcc ggtaaatcgg atgtgatggt
     1021 cgtcggattt gacggtacac cggatggcga aaaagcggtg aatgatggca aactagcagc
     1081 gactatcgct cagctacccg atcagattgg cgcgaaaggc gtcgaaaccg cagataaagt
     1141 gctgaaaggc gagaaagttc aggctaagta tccggttgat ctgaaactgg ttgttaagca
     1201 gtagttttaa tcaggttgta tgacctgatg gtgacataaa tacgtcatcg acagatgaac
     1261 gtgtaatata aagaaaagca gggcacgcgc caccctaaca cggtggcgca ttttatggac
     1321 atcccgaata tgcaaaacgc aggcagcctc gttgttcttg gcagcattaa tgctgaccac
     1381 attcttaatc ttcaatcttt tcctactcca ggcgaaaccg taaccggtaa ccactatcag
     1441 gttgcatttg gcggcaaagg cgcgaatcag gctgtggctg ctgggcgtag cggtgcgaat
     1501 atcgcgttta ttgcctgtac gggtgatgac agcattggtg agagcgttcg ccagcagctc
     1561 gccactgata acattgatat tactccggtc agcgtgatca aaggcgaatc aacaggtgtg
     1621 gcgctgattt ttgttaatgg cgaaggtgag aatgtcatcg gtattcatgc cggcgctaat
     1681 gctgcccttt ccccggcgct gctggaagcg caacgtgagc gtattgccaa cgcgtcagca
     1741 ttattaatgc agctggaatc accactcgaa agtgtgatgg cagcggcgaa aatcgcccat
     1801 caaaataaga ctatcgttgc gcttaacccg gctccggctc gcgaacttcc tgacgaactg
     1861 ctggcgctgg tggacattat tacgccaaac gaaacggaag cagaaaagct caccggtatt
     1921 cgtgttgaaa atgatgaaga tgcagcgaag gcggcgcagg tactgcatga aaaaggtatc
     1981 cgtactgtac tgattacttt aggaagtcgt ggtgtatggg ctagcgtgaa tggtgaaggt
     2041 cagcgcgttc ctggattccg ggtgcaggct gtcgatacca ttgctgccgg agataccttt
     2101 aacggcgcgt taatcgcggc gttgctggaa gaaaaaccat tgccagaggc gattcggttt
     2161 gcccatgctg ccgctgcgat tgccgtaaca cgtaaaggcg cacaaccttc cgtaccgtgg
     2221 cgtgaagaga tcgacgcatt tttagacagg cagaggtgac gcttggctac aatgaaagat
     2281 gttgcccgcc tggcgggcgt ttctacctca acagtttctc acgttatcaa taaagatcgc
     2341 ttcgtcagtg aagcgattac cgccaaagtt gaagcggcga ttaaagaact caattacgcg
     2401 ccatcagctc tggcgcgtag cctcaaactc aatcaaacac ataccattgg catgttgatc
     2461 actgccagta ccaatccttt ctattcagaa ctggtgcgtg gcgttgaacg cagctgcttc
     2521 gaacgtggtt atagtctcgt cctttgcaat accgaaggcg atgaacagcg gatgaatcgc
     2581 aatctggaaa cgctgatgca aaaacgcgtt gatggcttac tgttactgtg caccgaaacg
     2641 catcagcctt cgcgtgaaat catgcaacgt tatccgacag tgcctactgt gatgatggac
     2701 tgggctccgt tcgatggcga cagcgatctt attcaggata actcgttgct gggcggagac
     2761 ttagcaacgc aatatctgat cgataaaggt catacccgta tcgcctgtat taccggtccg
     2821 ctggataaaa ctccggcgcg cctgcggttg gaaggttatc gggcggcgat gaaacgtgcg
     2881 ggtctcaaca ttcctgatgg ctatgaagtc actggtgatt ttgaatttaa cggcgggttt
     2941 gacgccatgc gccaactgtt atcacatccg ctgcgtcctc aggccgtctt taccggaaat
     3001 gacgctatgg ctgttggcgt ttaccaggcg ttatatcagg cagagttaca ggttccgcag
     3061 gatatcgcgg tgattggcta tgacgatatc gaactggcaa gctttatgac gccaccatta
     3121 accactatcc accaaccgaa agatgaactg ggggagctgg cgattgatgt actcatccat
     3181 cggataaccc agccgaccct tcagcaacaa cgattacaac ttactccgat tctgatggaa
     3241 cgcggttcgg cttagattta cgctgtcttt tgatcaaatt attaccatcg gttgttttca
     3301 gaagcatgaa cattgctgca gaagcaacag taataatgcc catcgtgata aacgtatagt
     3361 agaattgttc gacagtcgtt gtgccttcca tccctaatat aaacaacggc aagatcagca
     3421 tccatatcgc cattgccggt gattgcaaag agaactgagc gatcattagc ccaataatca
     3481 ccgtgatccc cactaatgta tggcgatagc ccagacgacg taagacttgg gtaaccatcg
     3541 attttgcaat aatggaacct aacgctgtcg gtgccatcat acagccggca ataaacgcct
     3601 gataaccaaa tcctacctgt aacatcaatg gcataaggaa cggtacacag ccggtcccca
     3661 gacgggttgc aatattgcct acgataccga tcgagaaagt gcgggtttta aataaatcta
     3721 atgaaattaa tgggtttggc gtgcgtcgtg catggagaat atagagaagc agtaacccga
     3781 tgctggtgac aattaccgtc aaggcaatcc aactggcgac aatcttttcc ccgaatagct
     3841 ctattccgct tgagaagaga acaaggctga ggccaaacag caaaaagcca gtgatatcga
     3901 atctgcgtcg tacggtggtg aaattgggca tatgtttgcg cgcgtaaaga aggcccgcaa
     3961 tacctatggg gatattgatt aaaaatatcc agtgccaggt tgcccaggtg accagcacgc
     4021 cgccaagtac ggggcctaaa attggcccca ccagacccgg catggcgaca aaattcaata
     4081 ccggaagaag ttcattacga ggataagcac gcagtaaggc cagccgagca acaggcatca
     4141 tcattgcgcc gcctatcccc tgaataaccc ggaagacaac cagctgtggt agcgaattag
     4201 aaagtgcgca ggccagagaa cccaacgtga acagactcac ggcaagggta aaaatgcgac
     4261 gcgtaccgaa gcgatcggct agccatccgc ttaccggaat aagcatcgcc accgtcagcg
     4321 tataactgat gatggctgat tgcatcgcga gaggagaacg attaaggcta tgagcgattg
     4381 cgggtaaggc ggtattcaga atagtggcat caagtgcctg catgaagaag gccatcgccg
     4441 cgatccacgg caaacccgcc atactacgct tctttttatc gctcattcaa tgttctgtta
     4501 tcgggttatc acttatcagg tgagcgtagc agcgcctgac aagctttaaa tgccgcgtcg
     4561 ccatcgcttt ggataatcgc atcgacaatc gcctggtgca gatccagctt tatcactgtg
     4621 tcgctggtaa ttgacgtgaa gtaagtgtga taaaccgaat ggaatagcga ggcgaatgag
     4681 gtcaaaaacg gattggcgct catttcatag atatgctcat gccaggccat atcgacttcg
     4741 atccagcgtt cacggcgaaa gttctctttt aatgccgcca tttcggccat taacgtattg
     4801 agatgcgcct tctgttccgc ggtgccaacc gttgctgcca gtaggcaggc ttgcggctcc
     4861 agacagatac gcataaccag aaagtgatcg atgacctgat gaaagttctc ttctgtcatc
     4921 caccaggtaa gcaattcctg atcaagaaaa ttccagttcg attgtggcat gacccgagta
     4981 ccaattcgcg gtcgcggtaa aaccatccct tttgccgtta acgttttgac cgcttcgcgt
     5041 accgctgtac gactcacccc aaattgctcg cccagctcaa tctcaccagg caaaatggtg
     5101 ccgggttcat attcaccttt taagatccgt tgcgccagct tctcagccag aacatacgaa
     5161 aggtttttct gtgcagctaa ctgttgtgcg cttaaaggca ttacttatct tcctttttct
     5221 ttttattcct ctttagtatg ccaccaggaa gtgtgattac ggttgcaaaa acggcaaatt
     5281 gcttgtttta tggcacatta
//
LOCUS       DAJVTL010000207         5268 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.209, whole genome shotgun sequence.
ACCESSION   DAJVTL010000207 DAJVTL010000000
VERSION     DAJVTL010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5268
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.209"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            163..591
                     /gene="tolA"
                     /locus_tag="OQQ26_004135"
     CDS             163..591
                     /gene="tolA"
                     /locus_tag="OQQ26_004135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001479285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HCS1859382.1"
                     /translation="MGFRSASILTLIISGIIIGCTDAVSTNYHDRTSYYSDKAIETQY
                     VSSSERTSDVSEDIRLYAHQIKSAIEKQFGDASKYSGKECTLRMHMAPNGLLLEVKRE
                     SGDLDLCREAMNAIKNADIPAPPSPEVYKVFQNGVLDFKP"
     gene            763..1137
                     /locus_tag="OQQ26_004136"
     CDS             763..1137
                     /locus_tag="OQQ26_004136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001348108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tolA family protein"
                     /protein_id="HCS1859383.1"
                     /translation="MLTFWVGFVAGCTPLHPSDCHKTTATGSCSSGRWDDQDEWGAQA
                     RGIRAAINAKLDEPHNWKGKKCRLHMEFSQDGTALKISTSNGDKAYCEAIKSAAHKAK
                     FPAFNNPEVYRDFQKSGFDMRG"
     gene            1389..1604
                     /gene="essD"
                     /locus_tag="OQQ26_004137"
     CDS             1389..1604
                     /gene="essD"
                     /locus_tag="OQQ26_004137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage lysis protein EssD"
                     /protein_id="HCS1859384.1"
                     /translation="MKSMDKISTGIAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGS
                     LVFGLLTYLTNLYFKIKEDKRKAARGE"
     gene            1609..1923
                     /locus_tag="OQQ26_004138"
     CDS             1609..1923
                     /locus_tag="OQQ26_004138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1327 domain-containing protein"
                     /protein_id="HCS1859385.1"
                     /translation="MTQKYELIVKGIRNFENKVTVTLALRDKKRFDGEIFGLDISLDR
                     VEGAALEFYEAAARRSIRQVFLDVAAGLCEGDELLPQTRPCSEARYTIKINSSDNSIT
                     GC"
     gene            1979..2503
                     /locus_tag="OQQ26_004139"
     CDS             1979..2503
                     /locus_tag="OQQ26_004139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706619.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HCS1859386.1"
                     /translation="MSAKIKYGLSAAVLALIAAGASAPQILDQFLDEKEGNHTTAYRD
                     GSGIWTICRGATMVDGKPVVPGMKLSKEKCAQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VIRRDQESALACWG"
     gene            2508..2972
                     /locus_tag="OQQ26_004140"
     CDS             2508..2972
                     /locus_tag="OQQ26_004140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000091905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HCS1859387.1"
                     /translation="MSRVAAIIYALVICIIVCLSWAVNHYRDNAIAYKEQRDKKVSEL
                     KQAIATIADMQQRQRDVAALDAKYSRELANAKAENETLRADVAAGRRRLHIKAVCQSV
                     REATTASGVDNATSPRLADTAERDYFTLRERLMTMQMQLEGAQEYIRTQCIK"
     gene            3015..3167
                     /locus_tag="OQQ26_004141"
                     /pseudo
     CDS             3015..3167
                     /locus_tag="OQQ26_004141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001542815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
     gene            3908..4162
                     /locus_tag="OQQ26_004142"
                     /pseudo
     CDS             3908..4162
                     /locus_tag="OQQ26_004142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001710226.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
     gene            4676..5268
                     /locus_tag="OQQ26_004143"
                     /pseudo
     CDS             4676..5268
                     /locus_tag="OQQ26_004143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344498.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
BASE COUNT         1442 a         1231 c         1382 g         1213 t
ORIGIN      
        1 ttcaatagat tttctccaca ttatggatat tctttcagaa tatcccacgc agactttgtg
       61 taaatgttaa caaatgtgcg ttttatttga tctgattcgc tgtttgagcg tccaaaacaa
      121 cggtatatat aatcctttac tatatgacat atgtgaggaa aaatgggttt tcgtagcgca
      181 tcaattctta cgttgattat tagtgggatt attatcgggt gcactgatgc tgtatcgaca
      241 aattatcatg accgtacatc atattactcc gataaagcaa tagagacaca gtatgtgagt
      301 tcatctgaac gtacttctga tgttagtgag gatatccgtc tgtatgccca tcaaatcaag
      361 agcgccatcg aaaaacagtt cggggatgcg agtaagtatt caggaaaaga gtgtacactg
      421 agaatgcata tggccccgaa tggccttcta ctggaggtta aaagagaaag tggagacctc
      481 gatttatgtc gtgaagcgat gaatgcgata aagaatgctg atatacctgc ccccccttcg
      541 ccggaagtat ataaagtatt tcaaaatggg gtgctggatt ttaaaccctg atatttattg
      601 ttttgtaata aacggtttcg gcttaggttt gttctgacac aactacggca ctgagctaaa
      661 tttagcggat agtcagctct gagccagtgg cggacgtaac aactactatt gctgagattt
      721 taatggattg aggagcaaga agtgggatta aagaaaatcg ttatgttgac tttttgggtc
      781 ggttttgttg cgggatgcac acctttacac ccttcagatt gccacaaaac tactgctaca
      841 ggtagttgca gttcaggacg ctgggatgat caggatgaat ggggggcgca agcgcgggga
      901 atcagagctg caattaatgc caaacttgat gagccgcata actggaaagg gaaaaaatgc
      961 aggttgcata tggaattctc tcaggatggc acggcgttaa aaatatctac cagtaacggt
     1021 gataaagcct attgcgaagc gataaagtcc gcagctcata aagccaaatt tccggccttc
     1081 aacaatccgg aagtctacag agattttcag aaatctggct ttgacatgcg aggttagctc
     1141 ttcaattact atatctcatt catagcaaac tgacagattt gatgatgttc tatatacgaa
     1201 acctgtgatg tcaagtctga gctaatacaa ataaacataa tatcagagaa atacatttta
     1261 ttagctcgct acggcgagct ttttatattg catcgtctcc agcatatata tcaattaagg
     1321 ctctgattga tgtgtctgaa agcctacaca taataactat gccatccgtt ccgtgcggag
     1381 gtgaggctat gaaatccatg gacaaaattt caacaggcat tgcctacggc acctccgcag
     1441 gcagtgctgg ctactggttt ttacaactgc tcgataaagt cacgccctca cagtgggcag
     1501 caataggtgt gctgggtagc ctggtatttg gcctgctgac gtacctgaca aacctttatt
     1561 tcaagattaa agaagacaag cgtaaggctg cacggggaga gtaattcaat gactcaaaaa
     1621 tatgaactga ttgtgaaagg gatccgcaat tttgagaata aagttacggt aactttagcg
     1681 ttacgggaca aaaaacgctt tgacggtgaa atttttggcc tggacatctc gctggaccgt
     1741 gttgaaggtg ccgcgctgga gttttatgag gcagcagcca gaaggagcat cagacaggtc
     1801 ttcctggatg ttgctgccgg gttatgtgaa ggggacgagc tgttgccaca aacgcgcccc
     1861 tgttcagagg cgcggtatac cataaaaatt aacagttctg ataactcgat tacgggttgt
     1921 tagctttttg cagttggctt tccagtatct ttcattggta gcatcctgat aaatatccat
     1981 gagcgcaaaa atcaaatacg gcctgtcagc tgctgttctg gcgctgattg ctgcaggcgc
     2041 gtctgctcct caaatacttg accagtttct ggatgaaaaa gagggtaacc acactacggc
     2101 ataccgcgat ggttccggca tatggaccat ttgccgcggt gcaacgatgg tggacggtaa
     2161 gccagtcgta ccaggaatga aactgtcgaa ggaaaaatgc gctcaggtta atgccattga
     2221 gcgtgataag gcgctggcat gggtggagcg caatataaaa gttccactga ccgagccaca
     2281 gaaagccggt atcgcatcat tctgtcccta taacattggc cccggtaagt gtttcccgtc
     2341 gacgttttat aagcggctga atgccggtga tcgtaagggc gcatgcgagg cgattcgctg
     2401 gtggataaaa gatggtgggc gcgattgccg catacgttca aataactgct atggacaggt
     2461 tattcgtcgt gaccaggaaa gcgcattagc ctgttgggga tagatcagtg agcagagtcg
     2521 ccgcgattat ttatgctctg gttatttgca tcatcgtctg cctgtcgtgg gcggtcaatc
     2581 attaccgtga taacgccatc gcctacaaag aacagcgtga taaaaaagtc agtgagctga
     2641 agcaggcgat cgccaccatc gctgacatgc agcagcgtca gcgtgatgtt gctgcgctcg
     2701 atgcaaagta ctcgagagaa ttagccaatg cgaaagctga aaatgaaact ctgcgcgctg
     2761 atgttgccgc tggtcgtcgt cggttgcaca tcaaagcagt ctgtcagtca gtgcgtgaag
     2821 ccaccaccgc ctccggcgtg gataatgcaa ccagcccccg actggcagac accgctgaac
     2881 gggattattt caccctcaga gagcggctga tgacgatgca gatgcaactg gaaggggcac
     2941 aggagtatat ccgcactcag tgcattaagt agccttttta tcgtggtaaa catttcgcag
     3001 ggtatgaggt atttatgcca tcacgaatcc tacgcgcctg ccgtaagcgt ggatgtgcag
     3061 gtacaaccac agacagttct ggttactgcg ataaacatcg tggcgaagga tgggtacagc
     3121 atcaacgcgg actgagccgc caccagcgtg gctatggctc gaaatatagg ggcaaatcca
     3181 gtcacaacaa tcagcagcca cttctgcatc caccgcgact acgaaagcgt cagaagctgc
     3241 cacctcagcc cgggatgcgg cggcctcaaa agaggcagcg aaatcatcag aaacgaacgc
     3301 atcctcgagc gccagtagcg cagcttcctc ggcaacggcg gcaggaaatt ccgcgaaggc
     3361 ggcaaaaacg tccgagacga acgctaagtc ttctgagacg gcagcgggac agagcgcctc
     3421 agctgcggca ggctcaaaaa cagcggctgc gtcgtctgcc agtgccgcgt caacaagtgc
     3481 cgggcaggcc tcagccagtg ccaccgccgc cggaaaatcg gcagaaagcg ccgcatcatc
     3541 cgcttcaaca gccacaacaa aggctggtga agccactgag caggccacgg cagcagcgag
     3601 gtcagcttcc gcagcgaaga catccgaaac gaacgcgaaa gcgtcggaaa cccgtgcaga
     3661 atcctcaaaa acggcagcgg catcgtccgc cagttcggcg gcgtcatcgg catcatcggc
     3721 gtctgcttca aaagatgagg cgaccagaca ggcgtcagca gcgaagggta gcgccacgac
     3781 ggcatccacg aaggcgacag aggcagctgg tagtgcgacg gcagcagctc agagcaaaag
     3841 tacggcggaa tctgcagcaa cgcgcgctga gacagcggca aaacgggcag aggatattgc
     3901 atccgccgtg gcgcttgagg atgcgagcac gacgaaaaag gggatagtac agctcagcag
     3961 tgcgactaac agcacttccg agtcacaggc ggcaacgcca aaagccgtta aggccgcgta
     4021 tgacctggct aacgggaaat acaccgcaca ggacgctacg acagcacaaa aaggaattgt
     4081 ccagctcagt agtgcaacca acagcacatc tgaaacgctt gctgcgacac cgaaagcagt
     4141 gaaagcagct aatgacaatg cgaatggtcg ggtaccttct gcccgtaagg tgaatggtaa
     4201 ggcgctttca gcggatataa cactgacgcc gaaagatatt ggtacgctta actcaacaac
     4261 aatgtcattc agcggtggtg ctggttggtt caaattagca acggtaacca tgccacaggc
     4321 gagttctgtt gtttcaatta cgttgattgg tggcgctgga tttaacgtgg ggtcacctca
     4381 acaggcaggt atatctgaac ttgttttgcg tgcaggtaat ggtaatccga aggggattac
     4441 tggtgcttta tggcagcgca catcgacagg gtttacaaat tttgcctggg tcaatacatc
     4501 tggtgatact tacgatattt acgttgcaat cggaaattat gcgactggtg taaatattca
     4561 atgggattat accagtaatg ccagcgtgac gattcatacg tcaccagcat attctgctaa
     4621 taagccggaa gggttaacgg acggtacagt ttattcactc tatacgccat cagaacagtt
     4681 ttatccgcct ggcgcaccaa tcccgtggcc atcagatacc gttccgtctg gctatgccct
     4741 gatgcagggg cagacttttg acaaatctgc ctacccgaaa cttgcagtcg cttatccgtc
     4801 aggcgtgatc cctgatatgc gtggctggac gattaagggc aagcccgcca gtggtcgtgc
     4861 cgtattgtct caggaacagg acggcattaa atcgcacacc cacagcgcca gcgcatccag
     4921 tacggatttg ggtacgaaaa ccacatcgtc gtttgattac ggaaccaaat ccacgaataa
     4981 caccggggcg catacccata gtattagcgg gactgcaaat agtgctggtg cgcaccaaca
     5041 caagagttcc ggtgcatttg gtggcacgaa cacgagcatt ttccctaatg gttataccgc
     5101 gatttcaaat ctaagcgcgg ggattatgag cacaacaagc ggtagtggcc agactcgtaa
     5161 tgcagggaag acatcatcag atggtgctca tacccactcg ctgtccggca ctgctgcaag
     5221 cgcaggcgca catgcacata ctgtcggtat tggtgctcat acgcactc
//
LOCUS       DAJVTL010000208         5244 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.210, whole genome shotgun sequence.
ACCESSION   DAJVTL010000208 DAJVTL010000000
VERSION     DAJVTL010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5244
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.210"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..146)
                     /locus_tag="OQQ26_004144"
     CDS             complement(<1..146)
                     /locus_tag="OQQ26_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HCS1859388.1"
                     /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFT
                     YTAS"
     gene            425..1084
                     /locus_tag="OQQ26_004145"
     CDS             425..1084
                     /locus_tag="OQQ26_004145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HCS1859389.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
     gene            complement(1285..1662)
                     /locus_tag="OQQ26_004146"
     CDS             complement(1285..1662)
                     /locus_tag="OQQ26_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1859390.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
     gene            complement(1729..4695)
                     /locus_tag="OQQ26_004147"
     CDS             complement(1729..4695)
                     /locus_tag="OQQ26_004147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs3 family transposase"
                     /protein_id="HCS1859391.1"
                     /translation="MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRG
                     PANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRRE
                     HLSELQTVFGFRPFTMSHYRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALN
                     AVERASAEAITRANRRIYDALAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKP
                     NSRHMLEHIERLKAWQALDLPTGIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYA
                     TLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIG
                     QALIDAKQSGRDAFAAIEAVMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRY
                     APEFLAVLKLRAAPAAKNVLDAIEVLRGMNTDNARKLPADAPTGFIKPRWQKLVMTDA
                     GIDRRYYELCALSELKNSLRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSELPLAV
                     ATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQALI
                     DQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLT
                     KMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTSSSDGQ
                     NFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVLDGLLY
                     HESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKP
                     MIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRI
                     ERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASG
                     LNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSA
                     KIGAGKFRPLRPLQPA"
     gene            complement(4698..5234)
                     /locus_tag="OQQ26_004148"
     CDS             complement(4698..5234)
                     /locus_tag="OQQ26_004148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001133513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1859392.1"
                     /translation="MRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALISFA
                     RTGDTVVVHSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSPMANLMLSV
                     MGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGEQKTKLA
                     REFGISRETLYQYLRTDQ"
BASE COUNT         1066 a         1426 c         1575 g         1177 t
ORIGIN      
        1 tgagaagcgg tgtaagtgaa ctgcagttgc catgttttac ggcagtgaga gcagagatag
       61 cgctgatgtc cggcggtgct tttgccgtta cgcaccaccc cgtcagtagc tgaacaggag
      121 ggacagctga tagaaacaga agccactgga gcacctcaaa aacaccatca tacactaaat
      181 cagtaagttg gcagcatcac ccgacgcact ttgcgccgaa taaatacctg tgacggaaga
      241 tcacttcgca gaataaataa atcctggtgt ccctgttgat accgggaagc cctgggccaa
      301 cttttggcga aaatgagacg ttgatcggca cgtaagaggt tccaactttc accataatga
      361 aataagatca ctaccgggcg tattttttga gttatcgaga ttttcaggag ctaaggaagc
      421 taaaatggag aaaaaaatca ctggatatac caccgttgat atatcccaat ggcatcgtaa
      481 agaacatttt gaggcatttc agtcagttgc tcaatgtacc tataaccaga ccgttcagct
      541 ggatattacg gcctttttaa agaccgtaaa gaaaaataag cacaagtttt atccggcctt
      601 tattcacatt cttgcccgcc tgatgaatgc tcatccggaa ttccgtatgg caatgaaaga
      661 cggtgagctg gtgatatggg atagtgttca cccttgttac accgttttcc atgagcaaac
      721 tgaaacgttt tcatcgctct ggagtgaata ccacgacgat ttccggcagt ttctacacat
      781 atattcgcaa gatgtggcgt gttacggtga aaacctggcc tatttcccta aagggtttat
      841 tgagaatatg tttttcgtct cagccaatcc ctgggtgagt ttcaccagtt ttgatttaaa
      901 cgtggccaat atggacaact tcttcgcccc cgttttcacc atgggcaaat attatacgca
      961 aggcgacaag gtgctgatgc cgctggcgat tcaggttcat catgccgttt gtgatggctt
     1021 ccatgtcggc agaatgctta atgaattaca acagtactgc gatgagtggc agggcggggc
     1081 gtaatttttt taaggcagtt attggtgccc ttaaacgcct ggttgctacg cctgaataag
     1141 tgataataag cggatgaatg gcagaaattc gaaagcaaat tcgacccggt cgtcggttca
     1201 gggcagggtc gttaaatagc cgcttatgtc tattgctggt ttaccggttt attgactacc
     1261 ggaagcagtg tgaccgtgtg cttctcaaat gcctgaggcc agtttgctca ggctctcccc
     1321 gtggaggtaa taattgacga tatgatcatt tattctgcct cccagagcct gataaaaacg
     1381 gttagcgccg gggttggatt tttcagcgtt ccagctaagg ctaaggcatt cctgttcaag
     1441 cgcaagccgg gctataaagc gcattatcgc tttacccgtg cccttatttc gatcgcactg
     1501 agaaacatac agctctttaa tatgcagctg accgctgtat cggggcgagg gataaagaat
     1561 attgcaacat gccaggccag taatgttatt gccgcagcgc gctctgatca ccagggtacc
     1621 ggaaagccgg ttgaataact ttttacagag ataatccttc atcaacgctt cctgaatgat
     1681 accttcgcca taataggggt cgtctcagaa aacggaaaat aaagcacgct aagccggttg
     1741 cagaggccgt agcggcctga acttccccgc gccgatcttg gcgctgctgc gccataggta
     1801 atcaccggtc aggttgatgt gctcccagcc gagtggcgac aggtactgca atagcgagtc
     1861 atcgacggca tgaccattgc cgcgcaacgc atgcgccgca cgctccaggt agaccgtgtt
     1921 ccacagcacg atggccgccg tcaccaggtt gaggccgctg gcccggtagc gctgctgctc
     1981 gaaactgcgg tcacggattt caccaaggcg gttgaagaac acggcacggg ccagcgcatt
     2041 gcgcgcctcg cccttgttca gcccggcatg cacgcggcgg cgtagctcga cgctttgcag
     2101 ccagtcgagg atgaacagcg tgcgctcgat gcggcccaac tcgcgcagcg cgacggccaa
     2161 gccgttctgg cgcgggtagc tgccgagttt cctgagcatc agcgaggccg tcaccgtgcc
     2221 ctgcttgatc gaggtggcca gccgcaggat ttcgtcccaa tgggcgcgga cgtgcttgat
     2281 gttgagcgtg ccgccgatca tcggcttgag cgcgtcatag gcggcatcgc ccttcgggat
     2341 gtagagcttg gtgtcgccca ggtcgcggat gcgcggcgcg aagcggaagc ccaagaggtg
     2401 catcagggcg aagacgtgat cggtgaagcc cgccgtgtcg gtgtagtgct cctcgatccg
     2461 caggtcggat tcgtggtaca gcaggccgtc gagcacgtag gttgagtcgc gcaggccgac
     2521 attgaccacc ttggtgtgga atggcgcgta ttggtcggag atgtgggtgt agaaagtccg
     2581 tcctgggctg ctgccatatt ttgggttgat gtgccccgtg ctctttgcct tgctagcggt
     2641 tcggaaattc tgtccgtccg atgatgatgt ggtgccatcg ccccagtgcc cggcaaaggg
     2701 atgccgaaac tgagcgttga ccagttcagc caacgctgtc gagtacgttt cgtcgcgggt
     2761 atgccaggct tgcagccaag cgagcttcgc gtaggtcgtg ccggggcagg actcggccat
     2821 cttggtcagg cccaggttga tcgcgtcggc caggatcgtg gtcaacaaca ggttcttgtc
     2881 cttggccaga tcgcccgatt tcaagtgcgt gaagtgccgg gtgaagcccg tccactcatc
     2941 gacttcgagc agcagttcgg tgatcttgac gtgcggcagg accatggctg tctggtctat
     3001 cagcgcctgc gcggtgtcgg gcaccgccgc atccagcggc gtgatcttca agcccgactc
     3061 ggtgatgatg gcatccggca ggtcgttggc tgccgccatg cggttgacgg tggcaagttg
     3121 tgcttccagc agcgtcagcc gctcatgcag atattgttcg cagtcggtgg ccacggccag
     3181 cggcaattcg ctggactgct tgaggctggt gaacttctcg ggcggtacca ggtagtcctc
     3241 gaagtccttg aactggcgtg aaccctgcac ccagatgtcg cccgagcgca gggagttctt
     3301 caactcggac agcgcgcaca gttcgtagta gcgccggtcg atgccggcgt cggtcatcac
     3361 cagtttctgc cagcgcggct tgatgaagcc ggtcggtgca tcggctggca gcttgcgggc
     3421 gttgtcggtg ttcatgccgc gcagcacctc aatggcatca agcacgtttt tggcggcggg
     3481 cgcggcccgc agcttgagca cggcaaggaa ttccggtgca tagcggcgca gggtggcgta
     3541 gctctcgccg atgcgatgca ggaaatcgaa gtcatcgggt tgcgcgagct tctgcgcctc
     3601 ggtgacgctc tcggcaaagg aatcccagga catgacggcc tcgatggcgg caaacgcatc
     3661 gcggcctgat tgcttggcgt cgatcagcgc ctgaccgatg cgcccgtaca gacgtacctt
     3721 ggcgttgatg gccttgcctg acgcctggaa ctgctgctga tgcttattct tggcagcgtt
     3781 aaacagctta cccaggatgc ggtcgtgcag gtcgatgatt tcgtcggtga cggtggccat
     3841 gccctcggtg gccagcgcca cgagagtggc gtagcgccgt tgcggctcga atttggccag
     3901 gtcggcgggt gtcatctggc cgccctcgcg ggcaatcttg agcaggcggt tctggtgaac
     3961 cagccgctcg atgccggtag gcagatcgag tgcctgccat gccttgaggc gttcgatgtg
     4021 ttccagcata tgccgcgaat ttggcttggc cggagactgg cgcaaccaag ccaaccaggt
     4081 cgtcttgccg ttgtcccggc gcttgagcag atcgtcgagg cggcggcgat gcgcgtccgc
     4141 cagtggttcg gccaaggcgt cgtagatgcg ccggttagca cgggtgatcg cctcggcact
     4201 cgcccgctcg acggcgttga gggcgggcag aatgaccgac tgccgccgca ggtgcccgat
     4261 caaggcgctg gccagcacga tgcctttgtc ggtttgcatc gccagctcgg tcagcatctg
     4321 gacggcctgc cggtaatggc tcatggtgaa gggccggaaa ccgaacacgg tttgcagctc
     4381 gctcaggtgc tcgcgccggg tctgctcccg ctggccgtac tcgttccagc tttcgacgcc
     4441 gaccttgagc tggtcggcga ccagcttcaa caagggcggg aacggtagtt catcgacgcc
     4501 caggatgacg ccgggaaagc gcaggtaaca gagctgcacc gcgaagccca gccgattggc
     4561 tggcccgcgc cgctgtcgga tgatcgagag gtcggtatcg ttgaatgtgt aatgtcggat
     4621 caggtcgtcc ttggagtccg gcaacgccag caggctttcc cgctcggcgg cggacaggat
     4681 ggaacgacgt ggcatattta ctgatccgtt ctcaagtatt gatacagggt ttcgcgactg
     4741 attccgaatt cacgagcaag cttggtcttt tgctcgccag cctcgacacg ttggcgcagt
     4801 tcggcaatac gctcagacga cagggatttc ttcctgccac ggtaagcccc gcgttgcttg
     4861 gcgagcgcaa taccctcgcg ctgacgctcg cggatcaggg cgcgctcgaa ctcggcgaac
     4921 gcgcccatca ccgagagcat caggttcgcc atcggagagt cttcgccagt aaaactgagg
     4981 tgttccttga cgaattcgat atgcacgccg cgttgtgtca gcgtttgcac gatccggcgc
     5041 aaatcatcga gattgcgcgc caggcgatcc atgctatgca ccaccacggt gtcgccggtg
     5101 cgggcgaagc ttatcagcgc ttccagttgc ggacgcttga catccttgcc ggatgccttg
     5161 tcgctaaaag cgcgatcaac cttgacgcct tccagttgcc gttccgggtt ctggtcgaag
     5221 gtgctgaccc tgatataccc aatg
//
LOCUS       DAJVTL010000209         5198 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.211, whole genome shotgun sequence.
ACCESSION   DAJVTL010000209 DAJVTL010000000
VERSION     DAJVTL010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5198
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.211"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..310)
                     /locus_tag="OQQ26_004149"
     CDS             complement(<1..310)
                     /locus_tag="OQQ26_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859393.1"
                     /translation="MNNVFLYRMPVGIAGAVSRPQDLTVEPVVLKSDNAFAAYGLAGK
                     YDDDGFFVPLADGDTADKVKGIYVRPYPTTSQPDMVRQVGSGKNFPGDAMKRGYVTVN
                     L"
     gene            complement(314..1435)
                     /locus_tag="OQQ26_004150"
     CDS             complement(314..1435)
                     /locus_tag="OQQ26_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HCS1859394.1"
                     /translation="MKYFFETRLGETRYRLADGSLLCKDVPIGRTGKQLYGADDLPKL
                     KPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHPEDENGNVRLVNPENWKELAVGH
                     LQNVRRGTGEQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQTEPGKAEQVDI
                     TGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDADTMNELVESAPAS
                     VTGDEGDLPQGVNLNINLSPQQPLPDKAPEMGGGPTGDSDDDLKTLLKALLAKLEGNA
                     TGDNDNKPDANPTGDGEDDEEETTITGDSAWRAEVIVPGIDLSRKMKPTAFKREVLAS
                     ADKTLVRQIVGDAQRPNMGMTSIASLNKQNAEFWANRKG"
     gene            complement(1439..2182)
                     /locus_tag="OQQ26_004151"
     CDS             complement(1439..2182)
                     /locus_tag="OQQ26_004151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706597.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HCS1859395.1"
                     /translation="MTNRRSRQAEIRYRTSLRRIARAVGDIVNGRYDGSNDSITEIIA
                     ALERYSEIITPWATKVAENFTADLTRQNEKVWRQHSKNISRELRNLVESAPVGQVMQS
                     IIAEQVKYIKSLPLEAADRVYDIQNKAIEAVVTGGRAEQFAKEIASTGDVAKSRADLI
                     ARTELGRATGALDMARAIAIGSDGYIWRTADDGDVRDSHDHMKGKFVRWDSPPTLDGM
                     TGHAGELPNCRCYKEIVFVRVPFAMKRAA"
     gene            complement(2073..3539)
                     /locus_tag="OQQ26_004152"
     CDS             complement(2073..3539)
                     /locus_tag="OQQ26_004152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HCS1859396.1"
                     /translation="MARNKQALRRTVQATADGYENFIARVGMQTPNQHSASTYRANFT
                     SRNRMLVEWSYRSSWIIGEAVDAIPDDMTRKGIRITSEIDAKDRGILESQLDELQIWD
                     ALNDVLKWSRLYGGAVGFIMIEGQAPMTPLRPETIGKGKFKGILPLDRWMVDPALTRR
                     IKDMGPDLGKPEFYDVVTTATGIPAWRIHHSRLIRFDGVTLPFQQKMTENEWGMSVVE
                     RIWDRLTAFDSATVGAAQLVYKAHLRTYSVEKLRELIALGGPAYEALLKNIDLIRQFQ
                     SNEGMTLMDSRDKFETHQYSFSGLDDILSQFAEQISGAVGIPLVRLFGQSPKGFSTGD
                     ADLANYYDRISSLQERRLRLPVRRILDIMHRSELGKPLPDDFTFEFNPLWQMSDVDRS
                     TVALNTTNAISTALGDGLMTLKAAMTDLRENSDVTGIGASITDEDIENAEDEAPPGIG
                     EPDDEPQEPSGGNPVSNQPTQDSEGGRRHRKWSLRWFK"
     gene            complement(3539..4942)
                     /locus_tag="OQQ26_004153"
     CDS             complement(3539..4942)
                     /locus_tag="OQQ26_004153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HCS1859397.1"
                     /translation="MTSTLTSKPTLNPALRSFWTMRARNKVLYGGRSSSKSWDAAGIA
                     IFLSNKYTLRFCCARQIQNKIEESVYTLLKIQIDRFGLRHRFRILNNKIINRVTGSEF
                     VFYGLWRNIEEIKSLEGIDVLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVT
                     DFVWRNFVVDPPEGTLIRKINYDENPFLSDTMLKVIDAARRRDPDGFKHVYEGVPESD
                     DDAAIIKLSWIEAAVDAHKTLNFEPSGRKRIGFDVADSGTDKCANVYRHGSVVFWADE
                     WKAKEDELLKSCQRTYQAALEREADIVYDSIGVGASAGAKFSEINADRKSENAYARRV
                     NYQRFNAGAGVHEPDDEYNGIPNKDFFANLKAQAWWLVADRFRNTFNAINNGEQYPVD
                     ELISIDSRCPLLEKLKLELTTPHRDFDRNGRVMVESKKDLAKREIPSPNVADAFIMAF
                     APIDTSLDIWEQLGRQA"
     gene            complement(4893..>5198)
                     /locus_tag="OQQ26_004154"
     CDS             complement(4893..>5198)
                     /locus_tag="OQQ26_004154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859398.1"
                     /translation="EHITSVQVAKFSVPLQMLIENISAAEKAMMRNTVRIESIVGTLA
                     TVGKIFADTAYRKAATDKVSLEADRLRRDAGIDDGNGERDLNDFYSDIQTDAESGFT"
BASE COUNT         1150 a         1462 c         1271 g         1315 t
ORIGIN      
        1 cgagattaac ggtcacgtag ccacgcttca tggcgtcgcc cgggaagttc ttgccactcc
       61 ccacctggcg aaccatgtcc ggctgcgaag tggtcggata agggcgcacg tagatcccct
      121 tcaccttgtc tgcggtatca ccatctgcca gcggcacgaa aaaaccgtca tcatcgtatt
      181 taccagccag gccataggca gcaaaggcgt tatcggattt aaggaccacc ggttcgacgg
      241 ttaagtcctg cgggcgagaa acagccccgg caatgccaac aggcatccgg tacagaaata
      301 cattattcat tttttaccct ttacggtttg cccagaattc agcgttttgt ttgttcaggg
      361 aagcgatact ggtcatgccc atgtttgggc gctgtgcatc accgactatc tggcgaacca
      421 gcgttttgtc agcggaagcc agaacctcgc gtttgaacgc ggtcggtttc atcttacggc
      481 tcagatcgat acccggaacg ataacttcgg cacgccaggc tgagtcacca gtaatcgtgg
      541 tttcctcttc atcgtcctcg ccgtcaccgg tcggattagc gtcaggttta ttatcgttat
      601 cgcccgtggc atttccttcc agcttagcca gcagggcttt cagtaatgtt ttgaggtcat
      661 catcactgtc gccggttgga cctccgccca tctctggtgc tttgtccggt agcggttgct
      721 gcggggacag gttgatgttg agattaacgc cctgcggcaa atccccctca tctcctgtaa
      781 ccgatgcggg agccgactcc accagttcgt tcatggtgtc agcgtcaccc gttttgatgg
      841 ccgtgcgcat gcgggtccac cagcttttct tttgatttgc cattgtgtct ctgtctccaa
      901 ttgcacaacg atttccggct ctgcctttag ggacaagagc cacatggttt ccggtaatat
      961 cgacctgctc ggctttacct ggctcggtct gctcgtactc cgcgtcatag ccgcacgaca
     1021 cttcgcgcag gccatcttcg ataagctgaa tggcgctttc gtctttgacg ataaggtcag
     1081 ccagcatcaa atcagactgc tcacccgtcc cgcgccggac attctggagg tgcccgacag
     1141 caagctcttt ccagttctcg ggatttacca gccgcacatt cccgttttca tcttcaggat
     1201 gcaggatcgt gatgctcatc ccttcgaatg aggcaagcgt ggccggatgg aatacctgct
     1261 caggagaacg cgtgacgact atttcaccga acttatcggg tttcagtttt ggcaggtcat
     1321 cagcaccata gagctgctta cctgttcgtc ctatcggcac gtctttgcac agcaacgagc
     1381 cgtcagccag gcggtatcgg gtttccccga gcctggtctc aaaaaagtat ttcatgggtt
     1441 atgctgccct tttcattgcg aatggaacgc gaacaaacac gatctcttta tagcagcggc
     1501 agtttggcag ctcgcccgcg tggccggtca tgccgtccaa agttggaggt gaatcccagc
     1561 ggacgaattt acctttcatg tgatcgtggg aatctcggac atcgccatca tcggctgtac
     1621 gccaaatata accatccgag ccaatagcta tcgctcgggc catatccagc gcgcccgttg
     1681 ctcttcccag ttccgttcgg gcaatcagat cggccctaga cttagcaaca tcgccggtag
     1741 atgcaatctc tttagcaaac tgctccgccc gaccaccggt gacaacagcc tctatcgctt
     1801 tgttctggat gtcgtacacc ctgtctgcgg cctcgagagg cagagatttg atgtacttga
     1861 cctgttcggc gatgatggat tgcatcacct ggcccacagg agcgctttcc acaagattgc
     1921 ggagctcgcg actgatgttc ttgctgtgtt gccgccaaac tttctcgttc tgccgggtta
     1981 ggtccgcagt aaagttttcc gcgacctttg tcgcccaggg ggtgatgatt tcactgtaac
     2041 gctccagcgc cgcaataatt tccgtgatac tgtcatttga accatcgtag cgaccattta
     2101 cgatgtctcc gaccgccctc gctatcctgc gtaggctggt tcgataccgg atttccgcct
     2161 gacggctcct gcggttcgtc atcaggttcg ccgatgccgg gcggcgcttc atcttcggca
     2221 ttctcgatgt cctcgtcggt aatggatgcc ccgatgccgg ttacgtcaga attttctcgc
     2281 aaatcagtca tagcggcttt cagtgtcatc agaccatcac ccagcgccgt actgattgcg
     2341 ttggtggtgt ttaacgccac cgttgagcga tcgacatcag acatttgcca gagcgggtta
     2401 aactcaaacg tgaaatcgtc cggcagcggc ttgccaagtt ccgaacgatg catgatgtcc
     2461 agtatccgcc gcaccggaag acgtaaacgc ctctcctgca acgaactgat gcgatcgtaa
     2521 tagttggcaa ggtctgcatc accggtagaa aatcctttcg gggactgtcc gaacaaccgc
     2581 accagtggga taccaacagc gccactaatc tgttctgcaa actgcgaaag gatgtcatcc
     2641 agaccactga agctgtactg atgggtttca aacttatccc gcgagtccat gagcgtcatg
     2701 ccttcattac tctggaactg tcgaatcagg tcgatattct tcagcaacgc ttcatacgca
     2761 ggaccaccaa gtgcgataag ctcgcgtagc ttctccacgc tgtaggtacg caaatgcgcc
     2821 ttgtagacca gctgcgccgc gccgacagta gcgctgtcga acgcggtaag acgatcccag
     2881 atacgctcta caaccgacat tccccattcg ttctcggtca tcttctgctg aaatggcaac
     2941 gtgacgccat caaagcgaat caggcgactg tgatgaatgc gccaggcagg aattcccgtt
     3001 gctgtggtca ccacatcgta aaactcaggt ttacccaggt ccggccccat atctttaatg
     3061 cggcgggtca gtgccgggtc gaccatccag cggtcgagcg ggagaatccc cttaaacttg
     3121 cccttaccga tggtttcggg tcgcagcggg gtcattggtg cctgcccctc aatcatgatg
     3181 aaacccaccg cgccgccgta gaggcgcgac catttcagca cgtcattcag cgcatcccag
     3241 atttgcaact catccagttg tgattcgaga atgccacgat cttttgcatc aatttccgaa
     3301 gtgatgcgaa tgcctttgcg ggtcatatca tccgggatag catcgactgc ttcgccgatg
     3361 atccaagatg aacgatagga ccattccacc agcatgcggt tacggctggt gaaattagcc
     3421 cggtaggtgg atgctgagtg ctggttaggt gtctgcatcc ctacgcgggc aataaaattc
     3481 tcataaccat cagctgtggc ctgcacagtt cgccgcaggg cttgtttgtt tcgtgccatc
     3541 aggcctgtct ccccagctgt tcccagatat ccagcgatgt atcgattggc gcgaaggcca
     3601 taatgaatgc atcagcaacg tttggtgacg gtatctcgcg ttttgcgagg tcttttttac
     3661 tttcgaccat cacacgtccg ttacggtcga aatcacgatg aggtgttgtc agttccagtt
     3721 tcagcttttc aagcaacgga caacgagaat ctatgctgat cagctcatcc acaggatact
     3781 gttctccgtt gttaatggcg ttaaacgtat ttctgaaacg gtcagccacc agccaccatg
     3841 cctgagcctt aagatttgcg aaaaagtctt tgttggggat gccgttgtac tcgtcatctg
     3901 gctcatgcac accagcaccg gcgttaaacc tctggtaatt cacacgtcgc gcgtatgcgt
     3961 tctcgctctt ccggtcagcg ttaatttcag agaatttagc accggcagac gcaccaacac
     4021 cgatagagtc gtaaacaata tctgcttcac gctccagcgc cgcctgataa gtacgctggc
     4081 agctcttcag taattcatct tctttggcct tccattcgtc ggcccagaaa acaacggatc
     4141 cgtgacggta aacgttagcg cacttatctg taccactgtc agccacgtca aagccaatac
     4201 gctttcttcc actgggttcg aaatttaacg ttttgtgcgc atccactgcg gcttctatcc
     4261 aagacagttt gatgattgcc gcatcatcat cagactccgg aacgccctca tacacatgtt
     4321 taaaaccatc cggatcacgg cgtcgcgccg cgtcgataac cttaagcatg gtgtcagaca
     4381 gaaacggatt ttcgtcatag ttaattttgc ggatgagagt gccttcgggc ggatcaacaa
     4441 cgaagttgcg ccagacgaaa tcagtaacaa gtccggggtt gaatatgaac cagcattccg
     4501 aaccctcttt acggatcgtt ggctccagaa ttttccactg gtattccgtc agtgcgtggg
     4561 cttcttccag ccacaacaca tcgatcccct ccagtgactt aatttcttcg atgttgcgcc
     4621 ataatccata aaaaacaaat tccgagccag taacccggtt tatgattttg ttgttcagaa
     4681 tacggaaacg gtgccgcaga ccaaacctgt ctatctgaat tttgagcagg gtatacaccg
     4741 actcttcgat tttattctgg atctgacggg cacaacaaaa acgcagggtg tatttattcg
     4801 acagaaatat ggcaatgcca gcggcatccc atgattttga cgatgaccga ccaccataaa
     4861 gcactttgtt acgtgcccgc atagtccaga aactacgtaa agccggattc agcgtcggtt
     4921 tggatgtcag agtagaagtc attgaggtca cgctctccat tgccatcatc aatacctgca
     4981 tcacggcgaa gacgatcagc ctccagagac accttatcag tggcggcctt gcggtaggct
     5041 gtatcagcaa atatttttcc taccgtcgca agcgtgccaa cgatggactc aatacgaact
     5101 gtattgcgca tcattgcttt ctcggcggcg ctgatatttt caatcagcat ctgaagtggc
     5161 acactgaatt tggccacctg aacagaggtg atatgctc
//
LOCUS       DAJVTL010000210         5112 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.212, whole genome shotgun sequence.
ACCESSION   DAJVTL010000210 DAJVTL010000000
VERSION     DAJVTL010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5112
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.212"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1026
                     /locus_tag="OQQ26_004155"
     CDS             <1..1026
                     /locus_tag="OQQ26_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA family autotransporter adhesin"
                     /protein_id="HCS1859399.1"
                     /translation="TENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAV
                     TVRQLQNAIGAVATTPTKYFHANSTAEDSLAIGEDSLAMGAKTVVNGNAGIGIGLNTL
                     VLADAINGIAIGSNARANHANSIAMGNGSQTTRGAQTGYTAYNMDAPQNSVGEFSVGS
                     EDGQRQITNVAAGSADTDAVNVSQLKSSEAGGVRYDTKADGSIDYSNITLCGGNGSTT
                     RISNVSAGVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMA
                     ITGLPQAYTPGASMASIGGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAA
                     LGAGIQW"
     gene            1394..3049
                     /gene="lldP"
                     /locus_tag="OQQ26_004156"
     CDS             1394..3049
                     /gene="lldP"
                     /locus_tag="OQQ26_004156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HCS1859400.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
                     GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
                     FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
                     VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
                     DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
                     WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            3049..3825
                     /gene="lldR"
                     /locus_tag="OQQ26_004157"
     CDS             3049..3825
                     /gene="lldR"
                     /locus_tag="OQQ26_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HCS1859401.1"
                     /translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
                     RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDIL
                     EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLTIAEASHN
                     IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTGQHQAVIDAIFAGDADGARKAM
                     MAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA"
     gene            3822..5012
                     /gene="lldD"
                     /locus_tag="OQQ26_004158"
     CDS             3822..5012
                     /gene="lldD"
                     /locus_tag="OQQ26_004158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent L-lactate dehydrogenase"
                     /protein_id="HCS1859402.1"
                     /translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
                     VALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIP
                     FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
                     PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
                     ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK
                     GNAA"
BASE COUNT         1122 a         1347 c         1404 g         1239 t
ORIGIN      
        1 acggaaaatg gcgtggtgat tggttatgac accactgacg gcgaactgct aggtgcattg
       61 tcaattggtg atgacggtaa ataccgccaa atcatcaacg tagctgatgg ttcagaagcc
      121 catgacgccg ttacggttcg ccagttgcag aacgctattg gagcggtcgc cactacgcca
      181 accaagtact ttcacgccaa ctcaacggca gaagactcac tggccattgg tgaagactcg
      241 ctggcaatgg gtgcgaaaac tgtcgttaat ggtaatgcag gtattggtat cggtttgaac
      301 actctggttc tggctgatgc gatcaacggc attgctatcg gcagtaacgc acgcgcaaac
      361 catgcaaaca gtatcgcaat gggtaacggt tctcagacca cccgtggtgc acagactggc
      421 tacaccgcct acaacatgga cgcaccgcaa aactctgtag gtgagttttc tgtcggtagt
      481 gaagacggtc aacgtcagat cacaaacgtc gcagctggtt cagcggatac cgatgcggtt
      541 aacgtgtcgc agctgaaatc ttctgaagca ggcggcgtgc gctacgacac caaagctgat
      601 ggttctatcg actatagcaa tatcaccctc tgtggtggca acggcagtac gactcgtatc
      661 agcaacgtct ccgctggcgt caacaacaac gacgcggtga actacgcgca gttgaagcaa
      721 agcgtgcagg aaacgaagca atacaccgat cagcggatgg ttgagatgga taacaaactg
      781 tctaaaactg aaagcaagtt gagcggtggt atcgcttctg caatggcaat aaccggtctg
      841 ccgcaggctt atacaccggg tgccagcatg gcttctattg gtggcggtac ttacaacggt
      901 gaatcggcag ttgctttagg tgtatcgatg gtgagcgcca atggtcgttg ggtctacaaa
      961 ttacaaggta gtaccaatag ccagggtgaa tactccgccg cactcggtgc cggtattcag
     1021 tggtaatgat ccattaagtt agtgtgacta agggcaaacg ccaaattgcc tgatgcgtta
     1081 cgcgcatcag gcaagataag gcgctccagg tcaacaatct aagggcaatt ctctgatgag
     1141 gattgccctt ttctttacca gacatctccc cccacaagaa ttggccctac caattcttcg
     1201 cttatctgat ctctggttca caattcccca attaaaactc acatcaatat tgccaataca
     1261 taacatttag ctaaccattc attgtcatta tccctacaca acacaattgg cagtgccact
     1321 tttacacaac gtgtgacaag gagatgagca acagactcat tacacgatgt gcgtggactc
     1381 caggagacct gcaatgaatc tctggcaaca aaactacgat cccgccggga atatctggct
     1441 ttccagtctg atagcatcgc ttcccatcct gtttttcttc tttgcgctga ttaagctcaa
     1501 actgaaagga tacgtcgccg cctcatggac ggtagcaatc gcccttgccg tggctttgct
     1561 gttctataaa atgccggtcg ctaacgcgct ggcctcggtg gtttatggct tcttctatgg
     1621 tttgtggccc atcgcgtgga tcattattgc agcagtgttc gtctataaga tctcggtgaa
     1681 aaccgggcag tttgacatca ttcgctcgtc tattctttcg ataacccctg accagcgtct
     1741 gcaaatgctg atcgtcggtt tctgtttcgg cgctttcctt gaaggagccg caggctttgg
     1801 cgcaccggta gcaattaccg ccgcattgct ggtcggcctg ggttttaaac cgctgtacgc
     1861 cgccggactg tgcctgattg ttaacaccgc gccagtggca tttggcgcga tgggcattcc
     1921 aatcctggtt gccggacaag taacaggcat cgacagcttt gagattggcc agatggtggg
     1981 gcgtcagcta ccgtttatga ccattatcgt gctgttctgg atcatggcga ttatggacgg
     2041 ctggcgcggt atcaaagaga cgtggcctgc ggtcgtggtt gcgggcggct cgtttgccat
     2101 cgctcagtac cttagctcta acttcattgg gccggagctg ccggacatta tctcttcgct
     2161 ggtatcactg ctctgcctga cgctgttcct caaacgctgg caaccagttc gcgtattccg
     2221 cttcggtgac ttgggggcgt cacaggttga tatgacgctg gcccacaccg gttacaccgc
     2281 gggtcaggtg ttacgtgcct ggacaccgtt cctgttcctg accgctaccg taacactgtg
     2341 gagcatcccg ccgtttaaag ccctgttcgc atcgggtggt gcgctgtatg agtgggtgat
     2401 caacattccg gtgccgtacc tcgataaact ggttgcccgt atgccaccag tggtcagtga
     2461 ggctacagcc tatgccgccg tgtttaagtt tgactggttc tctgccaccg gcaccgccat
     2521 tctgtttgct gcactgctct cgattgtctg gctgaagatg aaaccgtctg acgctatcag
     2581 caccttcggc agcacgctga aagaactggc tctacccatc tactccatcg gcatggtgct
     2641 ggcgttcgcc tttatctcga actattccgg actgtcatca acactggcac tggcactggc
     2701 gcacaccggt catgcattca ccttcttctc gccgttcctc ggctggctgg gggtattcct
     2761 gaccgggtcg gatacctcat ctaacgccct gttcgccgcg ctgcaagcca ccgcagcaca
     2821 acaaattggc gtctctgatc tgttgctggt tgccgccaat accaccggtg gcgtcaccgg
     2881 taagatgatc tccccgcaat ctatcgctat cgcctgtgcg gcggtaggcc tggtgggcaa
     2941 agagtctgat ttgttccgct ttactgtcaa acacagcctg atcttcacct gtatggtggg
     3001 cgtgatcacc acgcttcagg cttatgtctt aacgtggatg attccttaat gattgtttta
     3061 cccagacgcc tgtcagacga ggttgccgat cgtgtgcggg cgctgattga tgaaaaaaac
     3121 ctggaagcgg gcatgaagtt gcccgctgag cgccaactgg cgatgcaact cggcgtatca
     3181 cgtaattcac tgcgcgaggc gctggcaaaa ctggtgagcg aaggcgtgct gctcagtcga
     3241 cgcggcggcg ggacgtttat tcgctggcgt catgacacat ggtcggagca aaacatcgtc
     3301 cagccgctaa aaacgctgat ggccgatgat ccggattaca gtttcgatat tctggaagcc
     3361 cgctacgcca ttgaagccag caccgcatgg catgcggcaa tgcgcgccac acctggcgac
     3421 aaagaaaaga ttcagctttg ctttgaagca acgctaagtg aagacccgga tatcgcctca
     3481 caagcggacg ttcgttttca tctgacgatt gccgaagcct cacataacat cgtgctgctg
     3541 caaaccatgc gcggtttctt cgatgtcctg caatcctcag tgaagcatag ccgtcagcgg
     3601 atgtatctgg tgccaccggt tttttcacaa ctgaccggac aacatcaggc tgtcattgac
     3661 gccatttttg ccggtgatgc tgacggggcg cgtaaagcaa tgatggcgca ccttagtttt
     3721 gttcacacca ccatgaaacg attcgatgaa gatcaggctc gccacgcacg gattacccgc
     3781 ctgcccggtg agcataatga gcattcgagg gagaaaaacg catgattatt tccgcagcca
     3841 gcgattatcg cgccgcagcg caacgcattc tgccgccgtt cctgttccac tatatggatg
     3901 gtggtgcata ttctgaatac acgctgcgcc gcaacgtgga agatttgtca gaagtagcgc
     3961 tgcgccagcg tattctgaaa aacatgtccg acttaagcct ggaaacgacg ctgtttaatg
     4021 agaaattgtc gatgccggtg gcgctaggtc cggtaggttt gtgtggcatg tatgcgcgac
     4081 gcggcgaagt tcaggcagcc aaagcggcgg atgcgcatgg cattccgttt actctctcga
     4141 cggtttccgt ttgcccgatt gaagaagtcg cgccagccat caagcgccca atgtggttcc
     4201 agctttatgt actgcgcgat cgcggcttta tgcgtaacgc gctggagcga gcaaaagcag
     4261 cgggttgttc gacgctggtt ttcaccgtgg atatgccgac accgggagcg cgttatcgtg
     4321 atgcgcattc tgggatgagc ggcccaaatg cggcaatgcg ccgctacttg caagcggtga
     4381 cacatccgca atgggcgtgg gatgtgggcc tgaacggtcg tccgcatgat ttaggtaata
     4441 tctcggctta cctcggcaaa ccgactggac tggaagatta catcggctgg ctgggaaata
     4501 acttcgatcc gtccatctca tggaaagacc ttgagtggat ccgcgatttc tgggatggcc
     4561 cgatggtgat caaagggatc ctcgatccgg aagatgcgcg cgatgcagta cgttttggtg
     4621 ctgatgggat tgtggtttct aaccacggtg gccgccagct ggacggtgta ctctcttccg
     4681 ctcgtgcgtt gcccgctatt gcagatgcgg tgaaaggtga tatcgccatt ctggcggata
     4741 gcggaattcg taacgggctt gatgtcgtgc gtatgattgc gctcggtgcc gacaccgtac
     4801 tgctgggtcg tgctttcctg tatgcgctgg caacagcggg ccaggcgggt gtagctaacc
     4861 tgctaaatct gatcgagaaa gagatgaaag tggcaatgac gctgactggc gcgaaatcga
     4921 tcagcgaaat tacgcaagat tcgctggtgc aggggctggg taaagagttg cctgcggcac
     4981 tggctccgat ggcgaaaggg aatgcggcat agtcgtttgc gccccgttac tttattcgta
     5041 ccccttataa tggggtgtta gccagccaga cccggcatga ttactgcccc cagtcgtcca
     5101 tgatccgggg gg
//
LOCUS       DAJVTL010000211         5093 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.213, whole genome shotgun sequence.
ACCESSION   DAJVTL010000211 DAJVTL010000000
VERSION     DAJVTL010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5093
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.213"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(318..653)
                     /gene="iraM"
                     /locus_tag="OQQ26_004159"
     CDS             complement(318..653)
                     /gene="iraM"
                     /locus_tag="OQQ26_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HCS1859403.1"
                     /translation="MKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFT
                     LTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCILQIC
                     PYGLKQQSP"
     gene            914..1102
                     /locus_tag="OQQ26_004160"
     CDS             914..1102
                     /locus_tag="OQQ26_004160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HCS1859404.1"
                     /translation="MAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGDVVVSGATEPE"
     gene            1099..1260
                     /locus_tag="OQQ26_004161"
     CDS             1099..1260
                     /locus_tag="OQQ26_004161"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859405.1"
                     /translation="MILRHRTGPAFQAIKDSLAVGLNALTLTDITKNATYGVEIESLV
                     LEINAPASS"
     gene            1410..1625
                     /locus_tag="OQQ26_004162"
     CDS             1410..1625
                     /locus_tag="OQQ26_004162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II holin family protein"
                     /protein_id="HCS1859406.1"
                     /translation="MDQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGS
                     LLFGLLTYLTNLYFKIREDKRKAARGE"
     gene            1630..2160
                     /locus_tag="OQQ26_004163"
     CDS             1630..2160
                     /locus_tag="OQQ26_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000189902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HCS1859407.1"
                     /translation="MTQNYELIVKGIRNFENKVAVTLALRDKKRFDGEIFDLDISLDR
                     VEGAALEFYEAAARMRIRQVFLDVAAGLCEGDEQSPEKRPIILEAQNVWITYKGKLPG
                     RITGSLKTPPTALRSEKDDIESPIEKLEKKLSVLIPSEDEKKRRDEQFAAFYDYCIEV
                     TRRNFVKIFEEGKSLQ"
     gene            2482..3015
                     /locus_tag="OQQ26_004164"
     CDS             2482..3015
                     /locus_tag="OQQ26_004164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706619.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HCS1859408.1"
                     /translation="MNVKIRYGLSAAVLALIAIGAPAPDILDQFLDEKEGNHTTAYRD
                     GSGIWTICRGATMVDGKPVVPGMKLSKEKCAQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VIRRDQEAALTCWGIDR"
     gene            3350..3787
                     /locus_tag="OQQ26_004165"
     CDS             3350..3787
                     /locus_tag="OQQ26_004165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005760024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HCS1859409.1"
                     /translation="MNRVLHGVIIALLVACGALWQATSHYRSNAITYKEQRDKATSII
                     SDMQKRQRDVAELDARYTKELADANATIESLRADVSAGRKHLQVAATCAKSTTGASSM
                     GYGESPGLTADAELNYYRLRSGIDRITAQVNYLQEYIRTQCLK"
     gene            3922..3995
                     /locus_tag="OQQ26_004166"
                     /pseudo
     CDS             3922..3995
                     /locus_tag="OQQ26_004166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226635.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
     gene            3990..4511
                     /locus_tag="OQQ26_004167"
     CDS             3990..4511
                     /locus_tag="OQQ26_004167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001723433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HCS1859410.1"
                     /translation="MNIVPLNYKGEPIRFNTDGWINATDIAKRFGKRLDHWLSNAETL
                     EYVRALDEVYSGEPSKILHTRDSGYVKTSKARKDRGGGTWLHPKLSVAFARWCDPKFS
                     VWCDLHIDSLLRGELTEQQKYEQACRIRDDRKSKASNGAREMARWRWDKPVIEANVEY
                     WREQLQLTLDIAC"
     gene            complement(4651..4827)
                     /locus_tag="OQQ26_004168"
     CDS             complement(4651..4827)
                     /locus_tag="OQQ26_004168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001205135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859411.1"
                     /translation="MRDKPANHKRGKNPVCIVFDYSRTLAQKEFPVGLRSWLMREYSD
                     DTAHDVSGLNTFIR"
BASE COUNT         1350 a         1036 c         1340 g         1367 t
ORIGIN      
        1 tttcccgttg ctgaaaaaga aaacgccaga ctgttagccg ggtatcagtt agcgggagaa
       61 atttttaaat acttcacaat tcaggcggtt gactgttgtc tggtttgcgg ggagtttgtt
      121 aaaagaaact ggcatggtga atccccctgt gcggaggggc aatcagcgag taggtatatg
      181 ggataatcgc ggattcaggt gctggtactg aattcaccgg gaggcacccg gcaccatgca
      241 atggcacata gcgccactct ccagcccctc tccggagggg ctgtttatat tgattttgtc
      301 agatgtgagt aaactcctta tggactttgt tgttttagtc cataaggaca tatttgcaga
      361 atgcaacggt tattaaagca ttcattcaat acgttatctg tatttgtagg gcattcctgg
      421 ctgtttttga ttaaattcca gaatgtttta ttgaatggta ctacgttgta aatggttaca
      481 ggtagcactt tgttattgag catgatgcct gtgtgagtca gtgtaaatat actttcagga
      541 ggtaagaaag catccgattg ataccagatt attaatttta ttttactcca tatgactgaa
      601 aaagatattc cgcatgatgg ctggataact gtatcaatca caatccactt catttagttt
      661 ccttgtttat gccttgctgg tgatgttctg aaaagtataa atgatatttt tgaatgtaaa
      721 ccatagagca gaattatttt tctgatgttg tttattgttt atttaaatgc agggtggttt
      781 atatctcgtc ttgtagttta tccatgcata tctgcttgat aatcaggttt ttatttaagg
      841 tatggttttg tgctttttct gtattacatg tcaggtattt taaagaatta ttttttagat
      901 ggtggaaaga accatggcat ttaaacacta tgatgttgtc agggcggcgc cgccgtcaga
      961 tcttgcggaa aagctgacac ataaactgaa agagggctgg cagccgtttg gtagtccggt
     1021 ggccataacc ccttataccc tgatgcaggc gattgcagca gaaggtgatg tggtggtcag
     1081 tggtgcaact gagccggagt gatactacgt catcgtactg gcccggcatt ccaggccata
     1141 aaagacagtc tggcagtggg actaaatgca ctgacgctga cggatattac caaaaatgca
     1201 acgtatggcg ttgagataga aagtctggtg ctggagataa atgcaccggc atcatcataa
     1261 aaagtgagcc agtcaaatgg aaggtatcgt taaactcacc ggtagtgtca gtggatcgtc
     1321 tgagacgctt gcatgagtta tcagagccat cagtagttaa ctggtggctt ttttattgtt
     1381 gtcagcttcc ggataacggg agacggggta tggaccagat ggaaaaaatc acaacaggtg
     1441 tgtcatacac cacgtcagcg gtgggaacgg gctactggtt cctgcagttg ctggacaggg
     1501 tttccccgtc tcagtgggcg gcaataggcg tgctggggag tctgctgttt gggctgctga
     1561 catatctgac taacctgtat ttcaaaataa gagaagacaa gcgtaaggct gcgcggggag
     1621 agtaattcaa tgacacaaaa ctatgaactg attgtgaaag ggatccgcaa ttttgagaat
     1681 aaagttgcgg taactttagc gttacgggac aaaaaacgct ttgacggtga aatttttgac
     1741 ctggacatct cgctggaccg tgttgaaggt gccgcgctgg agttttatga ggcagcggcc
     1801 agaatgagaa tcagacaggt attcctggat gttgctgccg ggttatgtga aggggatgag
     1861 cagtcgccgg aaaagcgccc cataatttta gaggcgcaga atgtgtggat aacctacaaa
     1921 ggaaagctac cgggaagaat tactggttct ctgaagacgc caccgacggc attgcggtca
     1981 gaaaaagatg atattgaatc gcccattgaa aaactggaga aaaaattgtc ggtgctgatt
     2041 ccttctgaag atgaaaaaaa acgccgcgat gagcagtttg cggcgtttta cgattattgc
     2101 attgaagtta ctcgcaggaa ttttgtgaag atttttgagg agggtaaatc tcttcagtaa
     2161 gcttaatggc ggacgctgca attaattcag gaaggtccgc aaggtcatct gtcagtggat
     2221 atgatgaaaa atcggcggca gttctgttaa gaagcgcttt aactaattcc ttttccttct
     2281 ccggcaacaa gttgattaga gctacgactg cttgcctgag tgcgattaaa tcagcaaaag
     2341 tttgttttgg tagatttgtg taatccgtag tcacctctgt gtttatcaga ttgacatcct
     2401 cctcccgcca gtgcccatca ctggcgaggt aagatttaac atatccgggg atttgaagcc
     2461 gataaatcct gataaatatc catgaacgta aaaatcagat atggcctgtc ggctgccgtt
     2521 ctggcactga ttgctatcgg tgcgcctgcg cctgatattc tcgaccagtt tctggatgaa
     2581 aaagaaggta accacactac ggcataccgt gatggttctg gcatatggac catctgtcgt
     2641 ggtgccacaa tggtggatgg taagcctgtc gtaccaggaa tgaaactgtc gaaggaaaaa
     2701 tgcgctcagg ttaatgccat tgaacgtgat aaggcgctgg catgggtgga gcgcaatatt
     2761 aaagtaccac tgaccgaacc ccagaaagcg ggtatcgcgt cattttgtcc ctataacatt
     2821 ggccccggta agtgtttccc gtcgacgttt tataagcggc ttaatgcagg tgatcgaaaa
     2881 ggtgcctgcg aggcgattcg ctggtggatt aaggatggtg gcagagactg ccgtattcgt
     2941 tcaaataact gttacggtca ggttattcgt cgggatcagg aagcggcgct gacatgctgg
     3001 ggtatcgaca gataagcaga atatttcgct gaaaaatgag gttggtcaac gcgggcggat
     3061 aacacgaaat cctgctaacc ggcaaaacgt aagtgaataa aagtaaaaac cccgattgca
     3121 ccaacagtcg gggttttgtg ttttctgacc ttgagtaagg caagggagaa attatgggta
     3181 gggaggtgtt ttccctgtga gaaagtataa aaaatttttt ctgaggttgt ccattatgaa
     3241 aggcattgaa gtggagactc cagccagtct ggatttaaca agagcagcgg cctttgctat
     3301 tcgtatgtgt ccattgctgt tctggtctgg gcaatccgct ggtggtgata tgaatcgtgt
     3361 tcttcatggc gtgattattg cgttgctggt ggcctgcggt gcgttgtggc aggccaccag
     3421 ccattaccgt agtaacgcca ttacctacaa agagcagcgc gataaggcca catccatcat
     3481 ctctgatatg cagaagcgtc aacgtgatgt agcagaactc gacgccagat acacaaagga
     3541 gcttgctgat gctaacgcga ctatcgaaag tctccgtgct gatgtttctg ctggtcgtaa
     3601 gcacctgcaa gtcgccgcca cctgtgcaaa gtcaacgacc ggagccagca gcatgggcta
     3661 tggagaaagc ccaggactta cagcagatgc tgaactcaat tattaccgtc tccgaagtgg
     3721 aatcgacagg ataaccgcgc aggttaacta cctgcaggaa tacatcagga cgcaatgcct
     3781 gaaataattt ttttgcaaat cacaaagtca atttaatgag cctcgcactt gcggggcttt
     3841 tatatgtccg cagtaaaccg cgcatcgcag cgcgtaacaa tcccgagtct ttcagaaagc
     3901 tgagcctgag aactgccgta tatggtggcg accatctcgg ggcggctttt ctgtgcgaac
     3961 aggctcatct ttctaaaagg taagacgcta tgaatatcgt tccactgaat tacaaaggcg
     4021 aacctatccg cttcaatact gatggctgga ttaatgccac tgatattgca aaacgtttcg
     4081 ggaagcgtct ggatcactgg ttgtccaacg ctgaaactct cgaatacgtt agagctctgg
     4141 atgaggttta ttcaggtgaa ccatcgaaaa ttctacatac ccgtgattcc gggtatgtaa
     4201 aaacaagcaa ggcacgaaag gacaggggcg gcggaacatg gctgcatcca aagttatcag
     4261 ttgcctttgc aagatggtgc gatccgaaat tctccgtatg gtgcgacctg cacattgata
     4321 gtctgcttcg cggtgaactg actgagcagc agaaatatga gcaagcatgt cgcattcgcg
     4381 atgaccggaa atcaaaagcc agcaatgggg caagagagat ggctcgctgg cgatgggata
     4441 agccggttat tgaagcaaat gtcgagtact ggcgcgagca actgcagttg actctcgata
     4501 tcgcgtgctg atggcaaacg caaaactgcg ttatcggaaa aatcaaagca ttacgagaac
     4561 tgagcaacag ctatccatta caaagtccat ctacgggtgg gcttgataat ggcttatacc
     4621 ctacacggga taacttaact gatatccctt ttaacggata aaggtattca ggcctgacac
     4681 atcatgcgct gtatcgtcgc tgtattcccg cattaaccat gaccgtagcc cgacggggaa
     4741 ctccttctgc gcgagtgtgc gggaataatc aaaaacgatg cacaccgggt ttttaccgcg
     4801 tttatggttc gcgggtttgt ccctcatgct cgccagtcct gtgcgggggt ggaagaaaca
     4861 ggacacttac actgattctt gtgggtacga tgctattcct ttctggatta tcccgatgtc
     4921 attcatgcag ggcgctgtat cagacgttcg tcatggctgt caggctgacg ggtcctcccg
     4981 gtggggtggc ctgccacggg gcgggagcgg cgcggaaaaa ggctagtttt tgaaatttta
     5041 ttcgtcatca tcactactgt aattgattga tattacagtg gttttatttt tgc
//
LOCUS       DAJVTL010000212         5076 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.214, whole genome shotgun sequence.
ACCESSION   DAJVTL010000212 DAJVTL010000000
VERSION     DAJVTL010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5076
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.214"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..682)
                     /locus_tag="OQQ26_004169"
     CDS             complement(<1..682)
                     /locus_tag="OQQ26_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HCS1859412.1"
                     /translation="MNNSINHKFHHISRAEYQELLAVSRGDAVADYIIDNVSILDRIN
                     GGEISGPIVIKGRYIAGVGAEYTDAPALQRIDARGATAVPGFIDAHLHIESSMMTPVT
                     FETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCD
                     VNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGL
                     GGKELNTYI"
     gene            857..2161
                     /gene="adeQ"
                     /locus_tag="OQQ26_004170"
                     /gene_synonym="yicO"
     CDS             857..2161
                     /gene="adeQ"
                     /locus_tag="OQQ26_004170"
                     /gene_synonym="yicO"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine permease AdeQ"
                     /protein_id="HCS1859413.1"
                     /translation="MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMV
                     YIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFV
                     VVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALM
                     GLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCC
                     GLFFGDVHFSGVIGEVDLSGALSLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSN
                     GKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLV
                     MFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSIT
                     EGIALGFMSYCIMNVCTGRWRDLNLCVVVVAALFALKIILVD"
     gene            2214..2661
                     /locus_tag="OQQ26_004171"
                     /pseudo
     CDS             2214..2661
                     /locus_tag="OQQ26_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418119.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1198 domain-containing protein"
     gene            2872..4062
                     /gene="nepI"
                     /locus_tag="OQQ26_004172"
     CDS             2872..4062
                     /gene="nepI"
                     /locus_tag="OQQ26_004172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418118.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine ribonucleoside efflux pump NepI"
                     /protein_id="HCS1859414.1"
                     /translation="MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT
                     PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV
                     SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPLRTVPKALSVIFGAVSIALVIA
                     APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV
                     MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFIL
                     KRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIILGLTFALVPVGWSTWITRSL
                     ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTARVK
                     MKKS"
     gene            complement(4103..4396)
                     /locus_tag="OQQ26_004173"
     CDS             complement(4103..4396)
                     /locus_tag="OQQ26_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859415.1"
                     /translation="MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKI
                     CTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM"
     gene            4618..>5076
                     /locus_tag="OQQ26_004174"
     CDS             4618..>5076
                     /locus_tag="OQQ26_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HCS1859416.1"
                     /translation="MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQ
                     DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGY
                     KLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKE"
BASE COUNT         1134 a         1144 c         1325 g         1473 t
ORIGIN      
        1 caatataggt gttaagttct ttaccaccca aacccgggca gtgaccgtcc agcgtcaggt
       61 ggcgaaaagc atccagttta tcgagcagcg cattctgccc gctaattacg ccagggtagt
      121 ccatcatttc tgcaaggccg gtaacctgcg gatggtcccg ccaggcgagc atctgttcaa
      181 gggtaaaact ggcaccgtta acatcgcagc cttccagggc gggtacgcaa gagctgacct
      241 gtaagtactg gttttgcctt gcctgttcgg cacagcgggc aaaccaggcg aatccggctt
      301 cgcccatcac gttgacgatt tcatgagggt cgcaaataac ggtcgtcagg ccgcgcggca
      361 gggtagcggt ttcaaaggtg accggcgtca tcatgctgga ttcaatatgc aggtgagcat
      421 caataaaccc tggcaccgcc gttgcgccgc gggcatcaat ccgctgcaaa gccggagcat
      481 cagtgtattc tgcgccaaca ccggcaatgt aacgtccttt aatcacaatt gggccggaaa
      541 tttctccgcc attgatccgg tcgagaatag agacattatc aataatataa tcggcaacag
      601 cgtcgccacg ggaaacggct aacaattcct ggtattcagc tcggctaatg tgatgaaatt
      661 tatggttaat agaattattc atatttttct cattttgatt ttatcaattt gattattatt
      721 tatcataaag aaacgtcgcg agattattaa agaatatcca ttaatgtgca attgaaatgt
      781 gataattatc actgaaccgt tgttgtcatt tgttttacaa aagcaaggga ttaaatctcc
      841 tccaatggac aaaaaaatga ataatgacaa taccgattac gtgagtaatg aatcagggac
      901 gctttcgcga ttatttaaac tacctcagca tgggaccacc gtccgcacag aattgattgc
      961 ggggatgacc acttttttaa ccatggtgta catcgttttt gtgaacccgc aaatcctcgg
     1021 cgcggcacaa atggacccga aagtggtgtt tgttaccacc tgtttgattg ccggtatcgg
     1081 cagtattgcg atggggatat ttgctaactt acccgtggcg ctggctccgg caatggggct
     1141 gaacgccttc tttgccttcg tggtcgtggg ggcgatgggc atctcctggc agaccgggat
     1201 gggcgcaata ttctggggcg cagttggact atttttgctc acgctgtttc gtatccggta
     1261 ctggatgatc tccaacattc ccttaagttt acgtattggt atcaccagcg gaattggatt
     1321 atttatcgcc ttaatgggat taaaaaatac tggcgttatt gtcgccaata aagacacgct
     1381 ggtgatgatt ggcgatttaa gttctcacgg cgtgttgtta ggcattttag ggttttttat
     1441 tataaccgtg ttgtcatcac gtcattttca tgccgcggtg ctggtttcta ttgtggtgac
     1501 gtcttgctgt ggattatttt tcggtgatgt tcattttagc ggcgtcattg gtgaagtgga
     1561 tttgagcggc gcgttatcac ttgaactcgc cggtatcatt ttctccttta tgctgatcaa
     1621 cctatttgat tcatcaggaa cattaattgg tgtgactgat aaagcgggct taatagatag
     1681 taacggtaaa ttccccaata tgaataaggc gctgtatgtt gatagcgtca gttcggtggc
     1741 aggcgcattt atcggtacct cgtctgttac tgcctatatt gaaagtactt ctggtgtggc
     1801 agtcggtggt cgcacggggc taacggctgt cgtggtcggc gttatgttcc tgttagttat
     1861 gttcttctca ccgctggtgg cgatggttcc tccttacgca accgctggag cgttaatctt
     1921 tgttggcgtg ctgatgactt cgagcctggc gcgcgttaat tgggatgatt ttaccgaatc
     1981 ggtgcctgcg tttattacca cggtgatgat gccctttact ttctcgatca ccgaagggat
     2041 tgcactcggc tttatgtcgt actgcatcat gaacgtgtgc accgggcgct ggcgcgatct
     2101 gaacctgtgt gtggtggtgg tcgcagctct gtttgcactg aagattattc tggtggatta
     2161 gtaactggcg agggtttcca gatatcatga gttctgatta cgcaggagaa ctcatgatct
     2221 ggataatgct cgccacgctg gcggtagtgt ttgtggttgg ttttcgggtg ctgacatccg
     2281 gggccagaaa agcgattcgc cgtctcagcg atcggctgaa catcgatgtc gtacccgtgg
     2341 agtcgatggt cgatcaaatg ggaaagtcag ctggtgacga atttttacgt tatttgcatc
     2401 gtccggatga gtcgcacctg caaaacgccg cgtaggtgtt gctcatctgg caaattgtca
     2461 ttgtcgatgg tagcgaacag aatctgctgc aatggcatcg gattttacaa aaagctcgcc
     2521 tcgccgatta ccgacgctca ggtcaggctg gcgctgggtt ttctgcgcga aaccgaacct
     2581 gaaatgcagg atattaatgc ttttcagatg cgctataacg cgttctttca gcctgccgag
     2641 ggcgttcact ggttgcattg aaaccgtttc gtcttatcag cctacagacc gcgcctgacc
     2701 tatcgggtgg ataagacgtt cacgccgcat ccggtaatct ttgccctgtt ccgtttcgat
     2761 cttaactcca gctcaagcaa caccgtaaaa gttgcaaaaa cgttaaatgc gtcacacatt
     2821 tcaatgttaa agtggtcggc ttttcccctg aaacatgcca cgggtaacac catgagtgaa
     2881 tttattgccg aaaaccgcgg cgcggatgcc atcacccgac cgaactggtc agccgttttc
     2941 tcggtggcgt tttgtgtcgc ctgtctgatt atcgttgagt ttttgcccgt cagtttgttg
     3001 acgccaatgg cccaggattt aggcatttcg gaaggggttg ccgggcaatc ggtgaccgtg
     3061 accgcctttg tggcaatgtt tgccagtttg tttattaccc agacaattca ggccactgac
     3121 cgccgctacg ttgttatttt gtttgccgtt ttgctgacgc tctcctgctt gctggtttcc
     3181 tttgctaact cattcagttt gcttttaatc ggtcgtgcct gtctggggct ggcgctgggc
     3241 gggttctggg cgatgtcggc gtcgctgacc atgcgtctgg taccgctgcg tacggtgccg
     3301 aaggcgctgt cggtgatctt cggcgcggtt tctattgcgc tggtgattgc cgcgccgttg
     3361 ggcagttttt taggcgagct tatcggttgg cgcaatgtct ttaatgcggc ggcggtgatg
     3421 ggcgtgctgt gtattttctg gattatcaaa tcattgcctt cactgccagg cgaaccctcg
     3481 catcagaaac aaaatacttt ccgcttatta caacgtccgg gtgtgatggc agggatgatc
     3541 gccatcttca tgtctttcgc cgggcagttt gctttcttca cgtatattcg cccggtgtat
     3601 atgaacctgg cgggattcgg cgtggatggc ttaacgctgg tgctgttgag ttttggtatc
     3661 gccagcttta ttggtacgtc gctttcgtcg ttcattctta aacgttcggt aaaactggcc
     3721 ttagcaggcg cgccgttaat actggctgtg agtgcgttgg tactgacgtt gtggggaagc
     3781 gataaaatcg ttgctaccgg cgtggcgatt atcttggggc taacttttgc attggttccc
     3841 gtcggctggt caacgtggat cacccgctcg ctggccgatc aggcagaaaa agccgggtct
     3901 attcaggtgg cggttattca gcttgctaat acctgtggcg cggcaatcgg cggttatgcg
     3961 ctggataata ttggtctgac ttcgccgttg atgttgtccg gcacattgat gttgctgact
     4021 gcattgttgg ttactgcaag ggtgaaaatg aagaaatcct gatatcaggt aaagaagcgt
     4081 tggtcagtag ttgttgctgt tcttacatat ccgggcattc taccttaccc aacgcttccc
     4141 aataattgct ctgattatta cgttccatcg ccacgatggc ctcgcgtata tgttgtttat
     4201 tgttttcatc tgacaacatt aacttttccc acgcttcatc tgataatgac gcctgtggcg
     4261 tgcaaatttt acgtaaatct tgtaataccg tggttttctc ttttgcggac tgcagtgagc
     4321 taaaaggcga ctcggcgtat acgatgcctg gcatagcgaa aaaagtgaaa ataagcagta
     4381 gtgtcgttgg tttcatggat tcaacctttt acaaatgtgt atcgaatgaa gcataagtgt
     4441 agtttgcttt catcgctctc atcatgctgt acgaaacgcg cttgcgtggt cagtaagaag
     4501 tgccagactt tatattccac ttttattcct ttttattctt atcgatagcg tttcgttttt
     4561 taaaccgcag cgaccttacc gctatagtca ggtaatcatt aataaaagga taaaaaaatg
     4621 aaactgacaa cacatcatct acggacaggg gccgcattat tgctggccgg aattctgctg
     4681 gcaggttgcg accagagtag cagcgatgca aaacacatta aagttggcgt tataaatggc
     4741 gcagaacaag atgtcgcgga agtcgctaaa aaggtggcaa aagagaaata tggcctcgat
     4801 gttgaactgg taggatttag cggttcgttg ctaccgaacg atgcgacaaa tcatggcgaa
     4861 cttgatgcga atgtcttcca gcatcgaccc tttcttgaac aagataatca ggcgcatggt
     4921 tataaactgg tagcggtggg aaatacgttt gtcttcccta tggcgggtta ttccaaaaaa
     4981 atcaaaaccg tggcgcaaat aaaagaaggc gcgacagtgg cgatccccaa cgacccgacc
     5041 aaccttggtc gcgcactttt actgttgcaa aaagag
//
LOCUS       DAJVTL010000213         5060 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.215, whole genome shotgun sequence.
ACCESSION   DAJVTL010000213 DAJVTL010000000
VERSION     DAJVTL010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5060
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.215"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..1868
                     /locus_tag="OQQ26_004175"
                     /pseudo
     CDS             1..1868
                     /locus_tag="OQQ26_004175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311542.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(2240..2506)
                     /gene="minE"
                     /locus_tag="OQQ26_004176"
     CDS             complement(2240..2506)
                     /gene="minE"
                     /locus_tag="OQQ26_004176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HCS1859417.1"
                     /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
     gene            complement(2510..3322)
                     /gene="minD"
                     /locus_tag="OQQ26_004177"
     CDS             complement(2510..3322)
                     /gene="minD"
                     /locus_tag="OQQ26_004177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HCS1859418.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
                     AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            complement(3346..4041)
                     /gene="minC"
                     /locus_tag="OQQ26_004178"
     CDS             complement(3346..4041)
                     /gene="minC"
                     /locus_tag="OQQ26_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HCS1859419.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK
                     HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
                     EKAPRPTPAPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
                     GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
                     QLVENALTVQPLN"
     gene            4561..4929
                     /locus_tag="OQQ26_004179"
     CDS             4561..4929
                     /locus_tag="OQQ26_004179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgJ family protein"
                     /protein_id="HCS1859420.1"
                     /translation="MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYIC
                     VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD
                     GKRSGKINQTTTKMLFMCRE"
BASE COUNT         1297 a         1179 c         1261 g         1323 t
ORIGIN      
        1 accttttcca ttgccggcaa tttatcgacc aatgtgttgc tggaaaatgg cggtaattta
       61 ttggtattag caggtaccga agcccgtgac tccacggttg gcaagggtgg tgcaatgcaa
      121 aacctgggtc aggactccgc cacaaaggtt aattctggcg ggcaatatac ccttgggcgg
      181 tcgaaagatg agtttcaggc tctggcccgg gcagaagatc tccaggtcac tgacgggacg
      241 gcaatcgtct acgcaggtac gctggcggat gcatcggtga gtggcgcgac aggaagcctg
      301 tcgttaatga cgccacggga taatgttacg ccagttaaac tcgaaggggc gatccggatt
      361 accgatagcg cgacattaac tatcggaaat ggcgtcgata cgacgcttgc cgatctgacg
      421 gcagccagcc ggggcagtgt ctggcttaac agcaataatt cctgtgcagg taccagcaac
      481 tgcgaatata gagtaaacag tttgctactc aacgacggtg atgtttattt atcagcgcct
      541 gccacaacta acgatatcta caatacgctg accaccagtg aactttccgg cagcggtaat
      601 ttctacctgc ataccaacgt tgcaggctcc cggggcgatc aactgatcgt caacaacaac
      661 gccactggta attttaaaat ctttgttcag gataccggcg tcagccctca gtctgacgac
      721 gctatgacgc tggtgaaaac agggggaggg gatgcttcgt tttcgctggg caataccggc
      781 ggtttcgttg atcttgggac ctatgagtat gtcctgaaaa gcgacggcaa cagcaactgg
      841 aacctgacta atgatgtcaa cccaaaccca aatccgaacc caaatccgaa cccaaaccca
      901 aacccaaatc cagacccgac tcccgatcca acgccgacac ccgttccgga gaaacgcatt
      961 acgccttcta cggcagccgt actcaatatg gcagcaacat taccgttggt atttgatgct
     1021 gagctaaaca gtattcgcga gcggttgaac ataatgaaag cgagtccaca caacaataat
     1081 gtctggggga cgatgtataa cacccgtaat aatgtcacca ccgatgcggg tgccgggttt
     1141 gagcagacgc tgaccggaat gacagtgggg atcgacagcc gtaatgatat tcctgagggg
     1201 attgcgacgc tgggcgcttt tatgggttat tcccattcac atataggttt tgatcgcgga
     1261 ggtcatggca gtgtgggcag ttattctctg ggcggctatg ccagttggga acatgaaagt
     1321 ggtttctatc tggacggtgt cgtgaagctg aaccgttttg aaagtaacgt agccggtaaa
     1381 atgagcagcg gtggagccgc caacggcagt tatcgcagca acgggctggg cggtcacatt
     1441 gaaaccggga tgcgatttac cgatggtaac tggaacctga cgccgtatgc atcgttaacg
     1501 gggttcaccg ctgataaccc cgaatatcat ttatccaatg gcatggaatc gaaatcagtc
     1561 gatacccgca gtatatatcg tgaactgggt gcaacgctga gttacaacat gcgcctgggg
     1621 aacggtatgg aaatgaaccc tggctgaagg cggctgtgcg caaagaattt gtcgatgata
     1681 accgggtgaa ggtgaataat gacggtaatt tcgtcaatga tttgtcgggc agacgtggaa
     1741 tataccaggc aggtattaaa gcctcattca gcagtacgtt tagcggacat ctcggggtgg
     1801 ggtatagcca tggtgccggt gtggaatccc cgtggaatgc ggtggctggt gtgaactggt
     1861 cgttctgacc atcaacgatt aaactgcgct tcggcgcagt tttcgtttac aggatgttaa
     1921 aagggaaaat tctggggcaa aaaaagcccg ccagttacgg cgggaaacct catcctatgg
     1981 gagaacaatg aataatgaaa ttgcggggtt atcatctccc agtatatcca cactaacaat
     2041 aaggttattt acgcaaccag gcataaacat tttgttctgt gcgtgggaac agccttaagg
     2101 tgtaaagggg gaggtggaaa tagcaatgag gagtatcagc aagaatactc gccgctttac
     2161 cacaacgtgg atgagaggga tgaaaaactc aaggcagaga taactctgcc ttgaagataa
     2221 atgcgctttt acagcgggat tatttcagct cttctgcttc cggtaaggtc acgttcagct
     2281 caagaataga aatatcgcca tctttttgct caagctgtac ggttaccatc tcaggatcaa
     2341 tttgtacgta tttacaaatg acctcaagaa tatctttacg caactgcggc agataatgcg
     2401 gttctgcatc gctgcgacgg cgttcagcaa caataatctg cagccgttct tttgcaatgt
     2461 tggctgtgtt tttcttccgc gagagaaaga aatcgagtaa tgccataact tatcctccga
     2521 acaagcgttt gaggaagcct ttcttctctt cttcaatgaa gcggaaagga cgttcttctc
     2581 ccaacagacg ttctacggta tctgcgtagg ctttacccgc atcggcgtta atgtcgagaa
     2641 tgaccggttc accctggtta gaggcgcgca atactgattg atcctctggg atcacgccga
     2701 cgagtttgat gcgcaggatc tccagcacat cttccatgct cagcatgtca cctctgctta
     2761 cgcggcctgg gttatagcgc gttaacagca ggtgctcttt aataggctct tcgccatttt
     2821 ctgcgcggcg tgattttgac gccagaatgc ctaaaatacg gtcagagtcg cgtactgagg
     2881 agacttccgg gttggtggta ataatggctt cgtctgcaaa atagagtgcc attaacgcac
     2941 cggtttcaat ccctgccggg gagtcacaaa cgataaattc aaaatccatc gctttcagat
     3001 catcaagaac tttggcgacc ccttcacggg tgagggcatc tttatcgcgt gtttgcgatg
     3061 ccggaagaat atagagattt tcagtacgct tatctttaat taacgcctga tttagcgttg
     3121 catcgccctg aatgacgttg acgaaatcgt aaacgacccg gcgttcgcaa cccataatca
     3181 ggtcgagatt acgcaggccg atatcaaaat ctatcacgac agttttcttt cccttctggg
     3241 ccaaaccagt ggcgatggcc gcgctggagg ttgtcttacc aaccccccct ttgcccgaag
     3301 taacaacaat aatgcgtgcc atagaaattc cttgttaaaa agggatcaat ttaacggttg
     3361 aacggtcaaa gcgttttcga ctaactgcag tcgcgccgct ttgccataaa attctgctgg
     3421 gatttgatca ctcagccagt attcacctgc gatggacacc aattccgcca tcaggttcgt
     3481 acaaaatatt tgcgtttccc ggtcaccact tgcccctgca agcgcacgac cgcgcatcat
     3541 gccatagaca tgaatgttcc catcggcaat caattcggct ccagcgctaa cgtggcttgt
     3601 aacaatcaga tcacattgtg gagcataaat acgctgaccg gaacgcaccg gggtatctat
     3661 taaacgcgtt tttgtgaccg gcgttgtatt ttgcgctgga gcctgcggtg cgggtgttgg
     3721 acgcggcgct ttttcctttc cttccgtcag gataggcagc cccatctttt caatttcggc
     3781 tttaagttgc gcatctttgc agccacttac gccaataacc cgcaaaccgg ttgccgaaac
     3841 cgccttatgc atcgctgacc agtttaccgg gtcttccagt gcactgacgt tgagtacaac
     3901 gggggcatgt tttaaaaatg cgggggcctg agcgattttg tcttccagcg cctgatggat
     3961 aaccttaggt tctgcctcat gcagatgaac cacagataaa gtgaagctac tgcctttaag
     4021 ctcgattggc gtgtttgaca tcctggcctt actcaattag ctattaatca tcgccagcgc
     4081 gcgatgatgt tccgaagact ataaggcatg ttatagtctg gattatattg aggcaagtca
     4141 ccctcccatt tattcagagt aaaagtctat tctgtgataa atggcgctga ttcatagctt
     4201 aaaaaatacc cttgtcaatc aacccattgc cgtcgtactt ttgattgttc ttatttacgc
     4261 ttcctttttc cgcaccctaa tcgcgacagc atctccagac ctgtttaaat atccagtgtt
     4321 gaggcaagtg tattttttca ccacgccagg ctttcttaac tttccatttt ttgcggcatc
     4381 attaaagaac agatacccgt tatcttaata tccgccacag aattgctcta tcatagaaac
     4441 cgcagaagac gtctgatact tctgtcaggt catcgtaact cgtccaggtc agcggttttg
     4501 attacggatt gatgatgaaa tgagcataag tgttgtacgg ttggattatc aggatgtgct
     4561 atgaatatga tgcgtatttt ttatatcgga ttgtcaggtg tggggatgat gttctcatca
     4621 atggcgtctg gaaatgacgc tggcggactt caatctccgg cgtgcggcgt tgtttgcgac
     4681 ccgtatattt gtgtgaactc agatggcatt tccccagagt taacaaggaa atatctcggc
     4741 gaaaaagccg ctgaaaactt acaatcatta caaggctacg atcccagcga atttacattc
     4801 gctaacggtg tattttgcga tgttaaagaa aaattatgtc gtgatgatcg ttattttggt
     4861 gtagatggta agcggagtgg aaaaatcaat caaaccacca caaagatgtt atttatgtgt
     4921 cgtgagtgat gtcttgttta cattatgttc tattcgtcat taacctcttg agcgacagag
     4981 aggagtgggg cgttaacgtt tatgacgggg agagtcaccg tcggttgaca tttacttaat
     5041 ttgaatatcg acgttatatt
//
LOCUS       DAJVTL010000214         5001 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.216, whole genome shotgun sequence.
ACCESSION   DAJVTL010000214 DAJVTL010000000
VERSION     DAJVTL010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.216"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            149..1339
                     /gene="aspC"
                     /locus_tag="OQQ26_004180"
     CDS             149..1339
                     /gene="aspC"
                     /locus_tag="OQQ26_004180"
                     /EC_number="2.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate transaminase"
                     /protein_id="HCS1859421.1"
                     /translation="MFENITAAPADPILGLADLFRADEHPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPG
                     GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
                     ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK
                     AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(1561..2208)
                     /gene="gloC"
                     /locus_tag="OQQ26_004181"
     CDS             complement(1561..2208)
                     /gene="gloC"
                     /locus_tag="OQQ26_004181"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase GloC"
                     /protein_id="HCS1859422.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
                     SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC
                     QSLTPDRWLKEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
                     SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
     gene            complement(2235..2783)
                     /locus_tag="OQQ26_004182"
     CDS             complement(2235..2783)
                     /locus_tag="OQQ26_004182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HCS1859423.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPRLFDQLYRLQGLLGTR
                     KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            complement(2964..4811)
                     /gene="ldtD"
                     /locus_tag="OQQ26_004183"
     CDS             complement(2964..4811)
                     /gene="ldtD"
                     /locus_tag="OQQ26_004183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCS1859424.1"
                     /translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
                     SEQGEALPQAQATAIMVGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
                     MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
                     LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
                     AMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPDD
                     DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
                     GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG
                     NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
                     GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
                     HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
                     RQSIPVNLYYLTAFVGADGRTQYRTDIYTYDLPARSSSQIVSKAEQLIR"
BASE COUNT         1207 a         1313 c         1243 g         1238 t
ORIGIN      
        1 ctttggtcct gtttttttta taccttccag agcaatctca cgtcttgcaa aaacagcctg
       61 cgttttcatc agtaatagtt ggaattttgt aaatctcccg ttaccctgat agcggacttc
      121 ccttctgtaa ccataatgga acctcgtcat gtttgagaac attaccgccg ctcctgccga
      181 cccgattctg ggcctggccg atctgtttcg tgccgatgaa catcccggca aaattaacct
      241 cgggattggt gtctataaag atgagacggg caaaaccccg gtactgacca gcgtgaaaaa
      301 ggctgaacag tatctgctcg aaaatgaaac caccaaaaat tacctcggca ttgacggcat
      361 ccctgaattt ggtcgctgca ctcaggaact gctgtttggt aaaggtagcg ccctgatcaa
      421 tgacaaacgt gctcgcacgg cacagactcc ggggggcact ggcgcactac gcgtagctgc
      481 cgatttcctg gcaaaaaata ccagcgttaa gcgagtgtgg gtgagcaacc caagctggcc
      541 gaaccataag agcgtcttta actctgcagg tctggaagtt cgtgaatacg cttattatga
      601 tgcggaaaat cacactcttg acttcgatgc actgattaac agcctgaatg aagctcaggc
      661 tggcgacgta gtgctgttcc atggctgctg ccataaccca accggtatcg accctacgct
      721 ggaacaatgg cagacactgg cacaactctc cgttgagaaa ggctggttac cgctgtttga
      781 cttcgcttac cagggttttg cccgtggtct ggaagaagat gctgaaggac tgcgcgcttt
      841 cgcggctatg cataaagagc tgattgttgc cagttcctac tctaaaaact ttggcctgta
      901 caacgagcgt gttggcgctt gtactctggt tgctgccgac agtgaaaccg ttgatcgcgc
      961 attcagccaa atgaaagcgg cgattcgcgc taactactct aacccaccag cacacggcgc
     1021 ttctgttgtt gccaccatcc tgagcaacga tgcgttacgt gcgatttggg aacaagagct
     1081 gactgatatg cgccagcgta ttcagcgtat gcgtcagttg ttcgtcaata cgctgcagga
     1141 aaaaggcgca aaccgtgact tcagctttat catcaaacag aacggcatgt tctccttcag
     1201 tggtctgaca aaagaacaag tgttgcgtct gcgcgaagag tttggcgtat atgctgttgc
     1261 ttctggtcgc gtaaatgtgg ctgggatgac accagataac atggctccgc tgtgcgaagc
     1321 gattgtggca gtgctgtaag cattaaaaac aatgaagccc gctgaaaagc gggctgagac
     1381 tgatgacaag cgcaacattg cctgatgcgc tacgcttatc aggcctacgc gtcccctgca
     1441 atattttgaa tttgcacgat tttgtaggcc ggataaggcg ctcgtgccgc atccagcata
     1501 aacaaagcgc actttgccag aaatccaggc ccgcattaaa agcgggcttt tttatgtgcc
     1561 ttaccagacg ggcatttcgt cttgcaggaa gggattatgc aggcgttcat aaccaagtgt
     1621 ggataatggt ccgtgacccg gaataaatgt cacgtcatcc cccagtggca gcaatttatc
     1681 tttgattgaa gaaatcagtt gattatgatc gccacgcggg aagtcactgc gccctactcc
     1741 gcctttgaaa ataacatcgc cagaaatcag cagctttgcc cgatcatcaa aaaacactac
     1801 atgacccggc gtatgcccag ggcaatgtaa cacctgtaaa gtcacattcc ctatgctgat
     1861 ggtatcgcct tctttcagcc aacgatctgg cgtcagcgac tggcactctt ccagaccaaa
     1921 catacgactt tgcgcaggca agccttgcag ccagaactca tcttcttttt ccgggccaaa
     1981 aactggcacg ccgtaatgtt gcgccagttc cgccgctgcg ccaacgtggt ccagatgacc
     2041 atgcgtcagc aggatctgca tcagtgtcag gccgctgtca tcaacttcct gtttgatttt
     2101 ttccgcatcg ccgccaggat cgaccagtgc ggccaggcgg gtttgttcac accagatcaa
     2161 tgaacagttc tgggagaatg cggtgaccgg aataatacga tagttcatac tgcccctgtt
     2221 tcgttaagcg attactacca gtgccgtgct ggcccggtat caatatgcac aaagttacta
     2281 cgtgggtaat atcctacacc acctgcgcgc atagataacg cggctttgcg aatattgctt
     2341 aacgcgatac cttcaatatg gaaatccatc gcctggcctt tagtgtgata gcttttcttc
     2401 gctactccac ggctgcgggc gcgtagttca ttgttggtat caatggaacg ataaccggaa
     2461 atgagttgca ccggtttgcg cgtgcctaac aacccttgca ggcgatacaa ctggtcgaat
     2521 aatcttgggt cgatggactt tattttgttc gcgcggtaat cgcggaaaaa atggttaagt
     2581 tttgccaatt cttcctgaat atagcctctg ccatcgaaaa actccgcttt gattgactct
     2641 ccggtatgaa gattattgag tgtcaaaatg cgcgggcgtg gggtagagag tgttgcaaac
     2701 gcaggggtcg gcaggatggc ggcaccgagt gcaacgccac caagcgccag caatttgcgg
     2761 cgattagcgt cgaatttgtc catgataatc aagtctacag gtcaatgtta tcgtttatat
     2821 gcacttctgg cgcacaagag gcaccttaac cgcccgtaaa gcagacgtca agatgactca
     2881 accccagcag tgacgggggc tgcagagaat cgcccccaat catgctaatt attacgacaa
     2941 ctgatttccc cgaactactt catttacctg attaattgtt ccgctttcga tacgatttgc
     3001 gagctggatc gcgcaggcag atcataagtg taaatatctg tacgatactg ggtacgacca
     3061 tctgcaccaa caaaggccgt caggtagtag agattcaccg gaatcgactg ccgaatattg
     3121 acgtaacgtg tatcaccctg cttcagcgca tcagaaatac gtttgtcatt ccagcctgca
     3181 tcctgcaaca gcatattcgc cagatcggaa gctttattca ctcgtacaca gcctgagctc
     3241 aatgcgcgtg tatcacgctt gaacagattg tggttcggcg tgtcatgcaa ataaatggcc
     3301 tctgaactcg gcatattgaa tttatagcgc cccagcgagt tccgtgggcc tggagcctgc
     3361 tggaagcgga acggtaaatt cgaggccgtg attgtagacc agtcaacctg ccatgggtca
     3421 atcgcttctc tgctgttcca gccgcgcatc accgtatagc catggctttc gagatatccc
     3481 ggatcgttgc gcacttttgg cagaatatct ttgcgtgcca gagttggagg tacgttccac
     3541 ggcgggttta ccactacgtt gttaagggca ctgctcatca tcggcgtttt gcgatcgggg
     3601 cgaccgacaa tgactcgcga atccagcacc tgattgccgt tctgatagta gaccagcgaa
     3661 taggccggaa tgttaaccat gatcccggta gaaagctctg ttggcagcaa gcgcaatcgc
     3721 tggatgttga gtgccaacac gccagcacgc tgggcgggcg ttacgtttaa ccagtcccgc
     3781 gttgccgggc caatagcacc atctgccccc aatccttgcc atgcctgaaa acgtttaacg
     3841 gcttccacca gttcattatc gtaggcggca cgaacggcag gcgcaggttt actacgagac
     3901 gtcgtttgtt tgtccatcgg cttagtttct gctgtttcaa cagtaacagc ggatgggctg
     3961 actaccgcgt cagttggcgt gtcatcgtca ggtagcgtaa ttttcggccc cccgtccaac
     4021 atgcctgtgc gttgcaatat ttcgcgcaac gccggtacgt cgttactcca ctgccctggg
     4081 cgcaacgttg ctttgccggt cagttggggc cacggtttgg tgtcactgag taaggccagt
     4141 aacgattcat gcatcgccgc atattgcgga tgctgcggtg ccagtcctgc aacaaacgta
     4201 ggcaattgac ctttatccaa cgccagctgc cattggttaa tcaccgaaag cggcggcgtt
     4261 gcaagcgcat aaggtttact gctatatagc cagcgagtgc ctttgaccgg aatatttgca
     4321 atgaaatgga gatagcccat catcgcatcg gagagcacca cgtcgcgtgc catcccgtta
     4381 acaccaggat cggtcagtaa ctctacccat ttattaaact gcggctggaa accggcaatc
     4441 gccacctctg ccagctgttg ctggaaggct ttaacagcat cacggttttc ccacatgggt
     4501 tgcatatcgc gtgcggcata caacagttga agctggttaa gataaaccgg cttgtaacct
     4561 gcgggtaatt gagattcgat ttgcgtgcgg gctttttcag ccgcaccttc aggcaatggc
     4621 tggatcccca ccattattgc cgtggcttgc gcctgcggca gtgcctcgcc ctgttcactg
     4681 acagccaccg ggctgtcgcc agggattact tcaggctcat cggcctgcgc attgaacagt
     4741 ggagcgaatg ttacggccag gcacaaactg attgccgaca gccgacgacc acacatcata
     4801 ttaagcaaca tcccttgccc cctgttttta tcatactctg aatagccagg ctgttatttt
     4861 acgacttgcc tgtacaacgc caatactcac gaaagtatga cgagcaagcc tgttactcat
     4921 caggcttatc ttcagtatat aaacgccgat acgtttttac ataacctaat gtaaagaagt
     4981 ttaaagaaaa gcgcgccgta a
//
LOCUS       DAJVTL010000215         4922 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.217, whole genome shotgun sequence.
ACCESSION   DAJVTL010000215 DAJVTL010000000
VERSION     DAJVTL010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4922
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.217"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1813)
                     /gene="cheA"
                     /locus_tag="OQQ26_004184"
     CDS             complement(<1..1813)
                     /gene="cheA"
                     /locus_tag="OQQ26_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HCS1859425.1"
                     /translation="MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF
                     RAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL
                     DAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQLPR
                     RIILSRLKAGEVDLLEEELGHLTTLNDVVKGADSLSAILPGDIAEDDITAVLCFVIEA
                     DQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTKRSSESTSIRVAVEKVDQLIN
                     LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS
                     RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR
                     LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV
                     AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTTIRILLPLT
                     LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK
                     VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ"
     gene            complement(1818..2744)
                     /gene="motB"
                     /locus_tag="OQQ26_004185"
     CDS             complement(1818..2744)
                     /gene="motB"
                     /locus_tag="OQQ26_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HCS1859426.1"
                     /translation="MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVM
                     WLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPN
                     IEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPM
                     FRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRA
                     NASRRELMVGGVDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHE
                     NAESQNEPVSALEKPEVAPQVSVPTMPSAEPR"
     gene            complement(2741..3628)
                     /gene="motA"
                     /locus_tag="OQQ26_004186"
     CDS             complement(2741..3628)
                     /gene="motA"
                     /locus_tag="OQQ26_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HCS1859427.1"
                     /translation="MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGS
                     FIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIE
                     NPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEV
                     PANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYG
                     FISPLASVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIEL
                     EEHVRAVKNPQQQTTTEEA"
     gene            complement(3719..4333)
                     /gene="flhC"
                     /locus_tag="OQQ26_004187"
     CDS             complement(3719..4333)
                     /gene="flhC"
                     /locus_tag="OQQ26_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhC"
                     /protein_id="HCS1859428.1"
                     /translation="MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLY
                     KELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLY
                     LEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSNCNCCGGNFITHAHQPVGSFACSLC
                     QPPSRAVKRRKLSQNPADIIPQLLDEQRVQAVLLIRCGATFQQR"
     gene            complement(4336..4686)
                     /gene="flhD"
                     /locus_tag="OQQ26_004188"
     CDS             complement(4336..4686)
                     /gene="flhD"
                     /locus_tag="OQQ26_004188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhD"
                     /protein_id="HCS1859429.1"
                     /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAT
                     TLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLN
                     DVNQPEEALRKKRA"
BASE COUNT         1146 a         1320 c         1203 g         1253 t
ORIGIN      
        1 cctggtgttg accaattaat tgatccacca gcaaggcgta gcggcgaccg ccactttgta
       61 agatcaccac aattccctgg gtggcttcgg ttttcgcgcc cgcgacgttg aacactttcc
      121 acagttcgac gatgggcaga tattcgcccc gcacttccag cacccgctcg ccgccggcca
      181 gtggatgcag atcggcttca cggggttgca gtgattccat gacagcattc agcggcagaa
      241 tgaaaacttc atccgcaacg cgtacggaca tgccgtcgag gatggccagc gtcagcggca
      301 gtaaaatgcg gatcgtagtg ccagtaccct gcttcgactg gatttcgaca tgaccgccca
      361 tctcctggat attacgttta acgacgtcca tgccgacgcc gcgcccggag acgtcggtga
      421 cctgctctgc agtggagaag cctggtgcaa atatcagcat cgcgacttcg tcgtcgctca
      481 tgttttcgct gacagtcaaa ccttgcgagg ccgcttttgc cagaattcgc tcacggttta
      541 gccccgcccc atcgtcggtc acttcaatgc aaatgttgcc gccctgatgt tcggcagaca
      601 gaattaaatt tccgacgctg tttttacctg cggcgagccg tttttctggc agttcaatac
      661 cgtgatcgag gctattgcgt accaagtggg tcagcgggtc gataatgcgt tctatcaggc
      721 tcttgtcgag ctcggtggaa ctgcccacca gcgtcagttc tacctgcttg ccgagttttc
      781 ccgccagatc acgcaccagc cggggatagc gactaaaaac atattccatc ggcatcatgc
      841 gaatcgacat cactgattcc tgcaaatcac gggcgttacg ttgtaactgc cccatgctgg
      901 ttatcaaatc accatgatta accgggtcca gttcgctgga acgctgggca agcatggact
      961 gggtgataac cagctcgccg acgaggttaa ttaattgatc aaccttttct accgctacac
     1021 ggatgctggt ggattcactg ctgcgcttcg ttttttcccg ctccacgcgg ccggttggcg
     1081 cttgttcggc tgccagttta agcactggtg gggtggatat ttttggcgag acttctactg
     1141 tttcaaaggt aatctgatcg gcttcaatca caaaacagag taccgctgtg atgtcatctt
     1201 cggcgatatc gcccggtaat attgccgaga gagaatccgc ccctttcacc acgtcattta
     1261 acgttgtcag atgccccagc tcttcttcca gcaggtcgac ttcgccggcc ttcaggcgcg
     1321 aaaggataat tcgtcgcggc aactgactgc gactttgctc atcttgcggt tcacttttgg
     1381 caaccacact taatcgggtc actgcggatg gcgtttcgcc tttcgcttct aatgccagtt
     1441 gacgcaaggc ctggcagata taatcgaagc tggcggcatc cggctcttgc gactgtttat
     1501 aagcgtcgag ctgttcttgc atgatgtcct tcgtttccaa aaacagattg ataatgtcgg
     1561 tgttgagttg catctcacct cgtctggctt catcgagcag gttttccatc agatgcgtgg
     1621 tttcctgcaa aacgctgaag ccaaaagttc ctgcccctcc tttgatcgag tgggcagccc
     1681 gaaagatggc attcaattgt tcggcatctg gcgcttccgg ctgcaaaacc agcagatgct
     1741 gctccatatc agccaacagt tcgtccgctt catcaaaaaa tgtctgataa aaatcgctta
     1801 tatccatgct cacgctgtca cctcggttcg gctgatggca ttgtgggaac actgacctgt
     1861 ggtgcaacct caggtttttc cagggcgctt actggctcat tctggctttc ggcgttttca
     1921 tgcaaaatgg cctgttcggc ttgtttgttc agtaccagca ggctgatgcg acggttgacg
     1981 gcatcatcag gtccgcgatc gcttaagcgc atcgttgccg ccatgccgac gacacgtaac
     2041 actttgccgc tatccacccc tccgaccatc agttcgcggc gggatgcatt ggcccgatcg
     2101 gcagaaagct cccagttgct gtaacctttc tcaccgctgg cgtagggaaa atcatcggta
     2161 tgacctgaaa ggctaatacg gttgggaata ccgttcagta caggcgcgat ggcgcgcaga
     2221 atgtcgcgca tatagggttc gacatcggca ctgccggttc taaacatcgg gcgattctgg
     2281 ctatcgatga tctgaatacg tagaccttcc tggaccagat cgattttgag atgtggacgc
     2341 aacgcccgca gtttcggatc ggactctatc aactggtcga gatcaccccg caatttccgc
     2401 aatcgacttt gctccatgcg ttttttcaac tcttcgatgt tcggctgctt attcacttcc
     2461 ccctggcttt gggtgtaatc atcaccaccg ccgggaattg ggctttcact attagaaatg
     2521 cgatcgccgc ccgtaaccgc tgtcgccagt ggagtccgga agtactccgc aatctgaatc
     2581 aactcttttg ggctggagat ggagatcagc cacatcacca gaaaaaaggc catcatcgca
     2641 gtcataaagt cggcataagc aatcttccac gatccatgtg ctgccccgtg gcttttggct
     2701 ttgcgtcgtt tgacgacaat aatcggatgc gcttgattct tcatgcttcc tcggttgtcg
     2761 tctgttgttg cggatttttc accgcacgca catgctcttc cagttcaata aacgacggac
     2821 gttcgctgga atagagcgtt ttgcgaccaa actcaacggc gataggcggt gcgtaaccgt
     2881 tcagattaga aagcagagtg actttgacgc actgcatcat tttgctggtt tcggcgcttt
     2941 tctgacgtaa aacactcgct aatggggaaa taaatccgta agccaataaa atgccgagga
     3001 aagtccccac catcgcatgt gcgataagcg cacccagctc ggcggcagga cgatcggctg
     3061 aacctaacgc gtgaacgacc cccattacag ccgcgacaat accaaacgcc ggaagtgagt
     3121 ccccgaccag cgccagactg ttcgccggga cttctgcctc gctttcgtgc gtctcaatct
     3181 cttcatccat cagggcttcg atttcgaagg tgttcatatg accgctgata atcagacgca
     3241 gataatcgac gataaaatca agcatgacgc tatccgcgag gatgcgtggg tagctggcga
     3301 agatctcgct ctcacgggga ttttcaatat cacgttccag cgaaaacatc cccatctgcc
     3361 gcgatttcgc catcaaccga taaagcagag ccagcagatc catatacatt gctttggtgt
     3421 atttggagcg acgaaacagc aacggcagcg ctttcagcgt gcctttaatc gctttgccat
     3481 tattgccgac gataaacgac ccaatccctg caccggcaat aatcaccagt tcagcgggtt
     3541 gatagagtgc tccaaggctt ccaccggtca tcaaataacc gccgaaaact gtaccgagaa
     3601 caactaggta acctaataag ataagcacga catcatcctt ccactgttga ccatgacagg
     3661 atgttcagtc gtcaggcgtt aacgcgcgat tggggcaaaa aaaagcagcg gtatgtcgtt
     3721 accgctgctg gaatgttgcg ccacaccgta tcagtaaaac agcctgtact ctctgttcat
     3781 ccagcagttg tgggataata tcggcaggat tctgggaaag tttacgtctt tttactgccc
     3841 gggatggcgg ttgacataag ctgcaggcaa agctgccaac aggctggtga gcgtgggtaa
     3901 taaaattgcc gccgcagcag ttgcagttgg aaagttgcag taatccactt tcaacaaacc
     3961 gcaccaatgt ccaggcacgg gttaatgcca gcagcggtcc ttcttctgct tgcgggcact
     4021 gttcaaggta taaacggtag gctttgatca ctgcatcgac gccattacac aagccggttt
     4081 tcagtaaaaa ctgccatgca ttacagaaca tcgaagcatg aacgttttgt tcccaggtca
     4141 taaaccagtc ggttgagaat ggcagcatgc ctttcggcgg tgggcttccg cgcagttctt
     4201 tataaagttt tatcaggcgt ccgcgactta actgtgtttc gctttccagc atctgcaaac
     4261 gagcgcccag ggtgatcaat tccattgcca gctgaatatc ccgcgcttcc tgaacaatgc
     4321 ttttttcact catgatcagg cccttttctt gcgcagcgct tcttcaggct gattaacatc
     4381 attcagcaag cgtgttgaga gcatgatgcc ggtatgaatt tgttggagat cgtcaacgcg
     4441 ggaatcttgc gtcaactgag taatcgtctg gtggctgtca aaacggaagt gacaaaccag
     4501 ttgattggtt tctgccagct taaccatttg cggaagagtc agtgccgcta acgttgtcgc
     4561 catttcttca tttatgccga gacgaaacat agcggacgct ttgtcctgaa caatcaaacg
     4621 ctgtgcaagt agtaaatatg acaagttgat gtcataaatg tgtttcagca actcggaggt
     4681 atgcattatt cccacccaga ataaccaact ttatttttat gcggtttcac cgcaccccgt
     4741 gatgtcgccg ggaagccccg gtaaaaaata attagcatta gaatagttgc gataagctgc
     4801 aataagcaga accacctttt tggtttaata agtccttaca aatagaaatg ggtctttaca
     4861 cttatctaag atttttccta aatcgacgca actgtactcg tcactacacg cacatacaaa
     4921 gg
//
LOCUS       DAJVTL010000216         4877 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.218, whole genome shotgun sequence.
ACCESSION   DAJVTL010000216 DAJVTL010000000
VERSION     DAJVTL010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4877
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.218"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            42..1120
                     /gene="cobT"
                     /locus_tag="OQQ26_004189"
                     /pseudo
     CDS             42..1120
                     /gene="cobT"
                     /locus_tag="OQQ26_004189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310813.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
     gene            1182..2108
                     /gene="ldtA"
                     /locus_tag="OQQ26_004190"
     CDS             1182..2108
                     /gene="ldtA"
                     /locus_tag="OQQ26_004190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001773987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HCS1859430.1"
                     /translation="MMRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFIVTVP
                     DHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATFRKGIVVN
                     VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
                     KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
                     LFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLR
                     AFINGQEVDVNRANAALQRRSGMPVNINRNGF"
     gene            2282..3247
                     /locus_tag="OQQ26_004191"
     CDS             2282..3247
                     /locus_tag="OQQ26_004191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001524950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859431.1"
                     /translation="MTKQKKNSRWQGYDPRYIYSLVVRRYFADMKTKIEIAEELGVSR
                     FKVARLIDEAIEQDYVRFIFPKQQAMDEEIASNLRKKFQLEDAIVLSVAESWTTQEEL
                     NHKLGEVTAEYLMQSLHEGMKVGIAWGRVLSSTVSKLSKLPPLDVVQLSGVHPGIEFS
                     QGPIDLIHKIAAISQGKAHPMYVPMWVDDEELAARLAGDPAVLDTQQYYSQLDVVITG
                     IGDWKSGSSSLCKIFPDTWCEALFQQDIAADVCISLVNREGKILHSPIERLGFGISTD
                     QLQKAKKVIGVAGGEEKYEGILASLKSGLLNVLITDFDTAIKLLD"
     gene            complement(3299..3757)
                     /locus_tag="OQQ26_004192"
     CDS             complement(3299..3757)
                     /locus_tag="OQQ26_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HCS1859432.1"
                     /translation="MKFEILVNDVDNSISDYQTAITFAGTQLLEKGYITAEYIDACLE
                     REKSYPTGLMMANGQGIAIPHADYTLVNVNSISIVRFANDVTFGQMEDADLTVDCSIM
                     FNLAFATSDQHMSILRRLFTLFQDNAFVETCRNLPATRVAKYVEDTLSAS"
     gene            complement(3768..4052)
                     /locus_tag="OQQ26_004193"
     CDS             complement(3768..4052)
                     /locus_tag="OQQ26_004193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HCS1859433.1"
                     /translation="MKKILVVCGNGIASSSIMVSVLQDFLKEEKIEAQVDKSSLMACT
                     SDTFNSYDLVVSSTKLDNPAITTRVIVGAGLLTGLGEDEIFAAVKEEMLK"
     gene            complement(4076..>4877)
                     /locus_tag="OQQ26_004194"
     CDS             complement(4076..>4877)
                     /locus_tag="OQQ26_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001564759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HCS1859434.1"
                     /translation="AYPFNWIYDRIPGFRNLNVTAETIQKRFGILGDPTMVGFIIGIL
                     LGFCGYGWKSPYHTIIASLQLGMYLAAVMLLLPRMTSIMMEGLVPLSNVARKKLVKRF
                     PDRQITVGMDTALIVGHPSVIAPALLLIPVIVILAVILPGNRVMPLGDLSQFVFFIAC
                     MVPVFNGNIIRTWVTSIILFGGGLYIASWMAPATNEVFQKFGTNPDASVMYSSLNPSA
                     NPFTGLFAALSHVGIIGYLMAGILLLSIGYLIKQKSRRQIETDLEKAL"
BASE COUNT         1311 a         1070 c         1231 g         1265 t
ORIGIN      
        1 gaactggtct tcctgatggc actgctataa agggacgtga catgcaaaca cttgccgatt
       61 tactgaatac gatccctgcc atcgatcctg ccgctatgtc gcgtgcacaa cggcatattg
      121 acgggttact caaacctgtt ggtagcctgg gaaggctgga ggcgcttgcc atacaactgg
      181 caggaatgcc ggggttgact ggcataccgc atgtgggcaa aaaagcggta ctggttatgt
      241 gtgccgatca cggcgtctgg gaggaagggg tcgctatttc cccaaaagaa gtgacagcca
      301 ttcaggctga aaatatgacc cgcggaacaa ccggcgtgtg tgtgctggca gcacaagcgg
      361 gcgctaacgt ccacgtaatt gatgttggta ttgatactgc tgagcctatc cccgggctta
      421 tcaacatgcg tgtcgcacga ggtagcggca atattgcttc agctccggca atgagtcgcc
      481 gtcaggctga aaagttgctt ttggacgtca tatgttatac gcgggagctg gcaaaaaacg
      541 gtgttacgct gtttggtgta ggtgaacagg ggatggcaaa cacgacaccg gcagcagcaa
      601 tagtcagcac aatcactggc cgggatcctg aagaagtggt tgggattggc gcaaacctgc
      661 cgacagataa actggctaat aaaattgatg ttgtgcgccg ggcgattacg ttgaatcaac
      721 caaatccgca ggatggcgtt gatgttctgg caaaagtggg tggatttgat ttggtcggaa
      781 tggctggcgt gatgttaggc gctgcttcct gcggtttacc cgtgttgctg gatggatttc
      841 tttcttatgc tgccgcgctc gcagcctgcc agatgtctcc tgcaatcaaa ccgtatctca
      901 ttccttctca cctgtcggca gaaaaagggg cgcgtatagc gctgtcgcat ttggggctgg
      961 agccttatct cgatatggag atgcgtttag gtgaggggag tggcgcagct ctggcgatgc
     1021 ccatcatcga agctgcctgt gcgatatata acaacatggc gaacttgctg ccagtaatat
     1081 tgttctaccg gggaatacga cttctgattt gaacagttaa aaacgaaaag tctgataaaa
     1141 gctatactta acggatagct ttcgcgactt aggaaaggga catgatgcgt cgtgtaaata
     1201 ttctttgctc atttgctctg ctttttgcca gccatactag cctggcggta acttatccat
     1261 tacctccaga gggtagccgt ttagtggggc agtcgtttat tgtaactgtt cctgatcaca
     1321 atacccagcc gctggagact tttgctgcac aatacgggca agggttaagt aacatgctgg
     1381 aagcgaaccc gggcgctgat gttttcttgc cgaagtctgg ctcgcaactc accattccgc
     1441 agcaactgat tttgcccgcc acttttcgta aagggattgt ggttaacgtc gctgagatgc
     1501 gtctttatta ctacccacca gacagtaata ctgtggaagt ctttcctatt ggtatcggcc
     1561 aggctgggcg agaaaccccg cgtaactggg tgactaccgt tgaacgtaaa caagaagctc
     1621 caacctggac gccaacgccg aacactcggc gcgaatatgc gaaacgaggg gagagtttgc
     1681 ccgcatttgt tcctgcgggg cccgataatc ccatggggct gtacgcgatt tatattggca
     1741 ggttgtatgc catccatggt actaatgcca attttggtat tgggctccgg gtaagtcagg
     1801 gctgtattcg tctgcgcaat gacgatatca aatatctgtt tgataatgtt cctgtaggta
     1861 cgcgtgtgca aattatcgac cagccagtaa aatacaccac tgaaccagat ggctcgaact
     1921 ggctggaagt tcatgagccg ttgtcgcgca atcgtgcaga atatgagtct gaccgaaaag
     1981 tgccattgcc ggtaacccca tctttgcggg cgtttatcaa cgggcaagaa gttgatgtaa
     2041 atcgcgcaaa tgctgcgttg caacgtcgat cgggaatgcc tgtgaatatc aaccgtaacg
     2101 gattttgaca ttcaaaacgt ctggtttttc ggtctgtgta agcattacgc catgcagaac
     2161 aggttgtttc gaatcataca aatgataatt ttcttctcat atgcgcatct cttatgagca
     2221 taatcgttat actcttctga tttatacatg tttgctgatg acatgatcaa tggaaaagag
     2281 aatgacgaaa cagaaaaaaa acagccgctg gcagggttac gatcctcgct acatatactc
     2341 gctcgtggtc agacgttatt ttgcggatat gaaaaccaag attgagatcg cagaggagct
     2401 tggcgtttcc cgctttaaag ttgccagatt gatcgatgag gcgatcgaac aggattacgt
     2461 gaggtttatc ttccctaagc agcaagcgat ggatgaagaa atcgccagta atctacggaa
     2521 aaaatttcaa ctggaagatg caattgttct ctcagttgct gaatcctgga cgacgcaaga
     2581 agaactcaat cacaaattgg gtgaagtcac cgctgaatat cttatgcaat ctcttcatga
     2641 aggtatgaaa gtggggatcg cctggggacg tgtattatca agcacggtca gtaagttgag
     2701 caagctgcct cctttagacg ttgtgcagtt atctggcgta catccgggga tagagtttag
     2761 tcaggggcca atagatctta ttcataagat cgctgccatt tcgcagggaa aagcgcaccc
     2821 aatgtacgtg ccgatgtggg tcgatgacga agagcttgca gccagactgg caggtgatcc
     2881 agcggtatta gatacacagc aatattactc gcagttggat gtggttatca ccggaatagg
     2941 cgactggaaa tcaggttctt caagcttgtg taaaatattt ccggatacct ggtgcgaagc
     3001 tttgtttcaa caagatatcg ctgcggatgt gtgtatctcg ttggtcaaca gggaagggaa
     3061 gattcttcat agtcctattg aacgtctggg atttggcatt tcgacggatc aactacaaaa
     3121 agccaaaaaa gtgattggtg tcgctggagg agaagaaaaa tatgaaggca ttcttgcttc
     3181 gctgaaatcc ggacttttga atgtcttaat tactgatttt gatacggcca ttaaacttct
     3241 ggattaatag ccatatcagt gaagaaaggg cagtaccgct gattctgccc ttttaatttc
     3301 aggacgctga gagcgtatcc tctacatatt tagctacgcg cgttgcaggt aaattgcggc
     3361 aagtctcaac aaaggcgtta tcctgaaaca gtgtgaataa acgacgcaat atcgacatat
     3421 gttgatcact ggtggcaaat gccaggttaa acataatgct acaatcaact gttaaatcag
     3481 catcttccat ctgcccgaaa gtgacatcat tggcgaaacg aacaatactg atgctgttta
     3541 catttaccag cgtgtaatcg gcatggggaa tggcgatacc ctgaccgttt gccatcatta
     3601 atcctgtcgg atagcttttt tcacgttcca ggcaggcgtc aatgtattct gcagtgatgt
     3661 agcctttttc caataattgc gtaccggcaa aggtgatcgc agtttgatag tcactgatgc
     3721 tgttatcaac atcattcacc agaatttcaa atttcattgc acacctgtta tttcaacatc
     3781 tcttctttaa ctgcagcgaa aatctcatct tcgcccagac cagtcagtaa tccagcgcca
     3841 acgatgacac gagtagtaat ggccgggtta tcgagtttgg tcgatgaaac caccaggtca
     3901 tagctgttga aggtatcgct ggtgcatgcc attaacgaag atttatcgac ttgcgcttca
     3961 attttctctt ctttcaggaa gtcctgcagt acagagacca tgatggaaga tgaggcaatt
     4021 ccgtttccgc aaactactaa gatttttttc atttgattat tcctctgtaa aagatttaaa
     4081 gcgctttttc caaatccgtt tcaatctggc gacgtgattt ttgtttaatt aagtatccaa
     4141 tagataacaa aaggatacct gccatcaaat agccaatgat tccaacatgg ctcagggcgg
     4201 caaacagacc agtaaatgga ttcgctgacg ggttaagtga agagtacatt acgctggcat
     4261 ccgggtttgt accaaatttc tggaagactt cgttggtagc cggtgccatc cacgacgcaa
     4321 tatacagacc accaccgaac aatatgatcg aggtcaccca ggtgcgaata atgttgccat
     4381 taaaaacagg taccatgcag gcaatgaaaa acacaaactg agagaggtca cccagtggca
     4441 taacgcggtt gccaggcaag attacggcga ggatcacaat gaccgggatc agtaataatg
     4501 caggggcgat aactgacgga tgacccacaa tcagggcagt gtccatgcca acagtgattt
     4561 ggcgatccgg gaaacgtttg accagttttt tgcgtgctac gttggaaagc ggaacaagcc
     4621 cttccatcat gatagaggtc atacgtggta acagaagcat gaccgcagcc agatacatcc
     4681 ctaactgtag gctggcgatt atggtgtggt atggggattt ccagccataa ccacaaaagc
     4741 ccaacaaaat accaataata aaaccaacca tagttggatc gccgagaatg ccaaaccgtt
     4801 tttgaatagt ttcggcggtc acattcagat tacggaagcc tgggatgcga tcataaatcc
     4861 agttgaatgg ataagcg
//
LOCUS       DAJVTL010000217         4778 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.219, whole genome shotgun sequence.
ACCESSION   DAJVTL010000217 DAJVTL010000000
VERSION     DAJVTL010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4778
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.219"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..135
                     /locus_tag="OQQ26_004195"
     CDS             <1..135
                     /locus_tag="OQQ26_004195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309178.1"
                     /note="with TorA forms the inducible trimethylamine
                     N-oxide reductase which transfers electrons from
                     menaquinones first to TorC then to TorA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine N-oxide reductase cytochrome
                     c-type subunit"
                     /protein_id="HCS1859435.1"
                     /translation="IGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
                     "
     gene            135..2649
                     /gene="torA"
                     /locus_tag="OQQ26_004196"
                     /pseudo
     CDS             135..2649
                     /gene="torA"
                     /locus_tag="OQQ26_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415517.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
     gene            2646..3245
                     /gene="torD"
                     /locus_tag="OQQ26_004197"
     CDS             2646..3245
                     /gene="torD"
                     /locus_tag="OQQ26_004197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HCS1859436.1"
                     /translation="MTTLTAQQIACIYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL
                     KSEPPLTAAVNALENRIAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ
                     EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
                     LREWLPEFATRCHQYDSFGFYAALSQLLLVLVEGDHQNR"
     gene            complement(3338..3643)
                     /gene="cbpM"
                     /locus_tag="OQQ26_004198"
     CDS             complement(3338..3643)
                     /gene="cbpM"
                     /locus_tag="OQQ26_004198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HCS1859437.1"
                     /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
                     FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
     gene            complement(3643..4563)
                     /gene="cbpA"
                     /locus_tag="OQQ26_004199"
     CDS             complement(3643..4563)
                     /gene="cbpA"
                     /locus_tag="OQQ26_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HCS1859438.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF
                     GQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
                     NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
                     PWEAALGTKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
                     PKPDENTAALWQQLADAQSSFDPRKDWGKA"
BASE COUNT         1120 a         1217 c         1341 g         1100 t
ORIGIN      
        1 atcggcacgc tcaacggcat gattggcttt accagtctcg ataaacgtga agaacgcacc
       61 ttgttgaaat atctgcaaat gaatgcgtct gataccgcag gtaaggctca cggcgataag
      121 aaggaagaaa aataatgaac aataacgatc tctttcaggc atcacgtcgg cgttttctgg
      181 cacaactcgg cggcttaacc gtcgccggga tgctggggcc gtcattgtta acgccgcgcc
      241 gtgcaactgc ggcgcaagcg gcgactgagg ctgtcatctc gaaagagggc attcttatcg
      301 ggtcgcactg gggggctatc cgcgcgacgg tgaaggatgg tcgctttgtg gcggcaaaac
      361 cgttcgaact ggataaatat ccgtcgaaaa tgatcgccgg attgccggat cacgtacaca
      421 acgcggcacg tattcgttat ccgatggtac gcgtggactg gctgcgtaag cgccatctga
      481 gcgacacctc ccagcgcggt gataaccgtt ttgtgcgcgt gagctgggat gaagccctcg
      541 acatgttcta tgaagaactg gaacgcgtac agaaaactca cgggccgagt gccttgctga
      601 ccgccagtgg ttggcaatcg acggggatgt tccataacgc ttcggggatg ctggcgaaag
      661 ctattgcctt gcatggtaat agcgttggta cgggcggaga ttactctacc ggtgctgcgc
      721 aggtgatcct gccgcgcgta gtcggttcaa tggaagtgta tgaacagcaa aaccattgtg
      781 ctgtggggct ccgatttgct gaaaaaccag caagcgaact ggtggtgccc ggatcacgat
      841 gtttatgaat attacgagca gctaaaagcg aaagtcgccg ccggtgaagt tgaggtcatc
      901 agcatcgatc cggttgtcac atccacccat gagtatctgg ggcgcgagca tgtgaagcac
      961 attgcggtta acccgcaaac tgacgtgccg ctgcaactgg cgctggcaca tacgctgtac
     1021 agtgaaaacc tgtacgacaa aaacttcctt gctaactact gtgtgggttt tgagcagttc
     1081 ctgccgtatc tgctgggtga gaaagacggt cagccgaaag atgccgcatg ggctgaaaaa
     1141 ctgaccggca ttgatgccga aaccattcgt gggctggcgc ggcagatggc ggcgaacaga
     1201 acgcaaatta ttgctggctg gtgcgtgcag cgtatgcagc acggtgaaca gtgggcgtgg
     1261 atgattgtgg ttctggcggc gatgctgggg caaattggcc tgccaggtgg tggttttggt
     1321 tttggctggc actacaacgg cgcaggcacg ccggggcgta aaggcgttat tctgagtggt
     1381 ttctccggct ctacgtcgat tccgcctgtt cacgacaaca gtgactacaa aggctacagc
     1441 agcactattc cgattgcccg ttttatcgat gcgatcctcg aaccggggaa agtgatcaac
     1501 tggaacggta aatcggtaaa actgccgccg ctgaaaatgt gtatttttgc cggaactaac
     1561 ccattccatc gccatcagca gatcaaccgc attattgaag gctggcgcaa gctggaaacg
     1621 gttatcacca tagataacca gtggacctca acctgccgct ttgccgatat cgtactgcct
     1681 gcgaccacgc agtttgagcg taacgatctc gaccagtacg gcaatcactc caaccgtggc
     1741 attatcgcca tgaaacaggt cgtgccgccg cagttcgagg cgcgcaacga cttcgatatt
     1801 ttccgcgagc tgtgccgtcg ctttaatcgc gaagaagcct ttaccgaagg gctggacgaa
     1861 atgggctggc tgaaacgcat ctggcaggaa ggtgtacagc aaggcaaagg acgcggcgtt
     1921 catctgccag cgtttgatga cttctggaat aacaaagagt acgtcgagtt tgaccatccg
     1981 cagatgtttg ttcgccacca ggcattccgc gaagatccgg atctcgaacc gctgggcacg
     2041 ccgagtggcc tgattgagat ctactcgaaa accatcgccg atatgaacta cgacgattgt
     2101 caggggcatc cgatgtggtt tgagaaaatc gaacactccc acggtgggcc cggctcgcag
     2161 aagtatccgt tgcatctgca atctgtgcat ccggattttc gacttcactc gcagttatgt
     2221 gagtcggaaa ctctgcgtca gcaatatacg gtagcgggta aagagccagt attcattaac
     2281 ctgcaggatg ccagcgcgcg cggtattcgt aacggtgatg tggtacgcgt ctttaacgct
     2341 cgcggtcagg tgttggcagg ggcagtggtt tctgaccgct atgcacccgg cgtggcacga
     2401 attcacgaag gggcatggta cgatccagat aaaggcggcg agcctggtgc gctgtgcaaa
     2461 tacggtaacc ccaacgtgtt gactatcgac atcggtactt cgcagctggc gcaggcgacc
     2521 agtgcgcaca ctacgctggt ggaaattgag aagtacaacg gaacagtgga gctggtgacg
     2581 gcgtttaacg gccccgtgga gatggtggcg cagtgcgaat atgttcccgc gtcgcaggtg
     2641 aaatcatgac cacgctgaca gcacaacaga ttgcctgtat ttacgcctgg ctggcgcagt
     2701 tgttctcccg tgaactggac gatgaacaac tgacgcaaat cgccagtgcg cagatggctg
     2761 aatggttttc gttgctgaaa agcgaaccgc cgctcactgc ggcggtgaat gcgctggaaa
     2821 accgtattgc cgctctgaca gtacgtgacg atgcccgtct ggaactggcc gctgactttt
     2881 gcggcctgtt tctgatgacc gacaaacaag cggcgctgcc gtatgcatcg gcctacaaac
     2941 aggacgagca agagattaaa cgcttgttag ttgaggcagg gatggaaacc agcggcaatt
     3001 tcaacgaacc ggcagatcat ctggcgatct atctcgagtt gttgagtcat ctgcattttt
     3061 cgctgggaga ggggaccgtt cctgcgcgaa gaatcgacag tttgcggcaa aaaacactga
     3121 cggcgctgcg ggaatggtta ccagagtttg ctacgcgttg ccatcagtat gacagctttg
     3181 gtttttacgc ggcactaagc cagttattgc tggtgttagt ggagggcgac caccaaaaca
     3241 gataacgtcg tttgtgcgcc tgaaaagatg cgtttagcgt cgcatcaggc attatggggc
     3301 agttgccgga tgcgtcatca catccggcaa acacacatca cggatgagct acaaaccggg
     3361 aaagccgctg gcgcagcagg cggttttcct gcttcaggtg cgcaatatca tccattaacg
     3421 tcagcgccac cgcgatcccc ggccagtcca gagccagttc atgacgcagg cgcaccgcgc
     3481 gttgcaccac gatggcggca tggtcgtcaa atacccaggt tgtttcctgg atctcacgcg
     3541 gttcaaccac ccccaaaccg acaatttcat tcaattcctc ttcagagatg ccggtatgca
     3601 ggcaaaattc ggtaatagta aaagtcaccg taacattagc cattatgctt tcccccaatc
     3661 tttacgtgga tcaaaagacg actgggcgtc tgccagttgc tgccacagcg cggccgtgtt
     3721 ttcatccggt ttcggcggca tcacgatttt cagtaccgca tacagatcgc cggtctgttt
     3781 tttgctcacc agacctttgc ctttaacgcg caatcgttgc ccggcctggc tgcctggcgg
     3841 gatagtcagc aaaatgcttt ctttcagtgt tggaacggtg actttagtac ccagcgccgc
     3901 ttcccacggg ctaaccggca ccacaatttc cagatcctgg ccgacaatat cgaacagcgg
     3961 atgtggcgca atatgaatca ccagccacaa atcgccattt ggaccgccgt tttcgcccgg
     4021 cgtcccctgg cctttcagac ggatgcgttg accattgccg acgcccgccg ggatcttcac
     4081 attcagcgtt ttcgggattt cctgttcgat catgccaaag gcgttataaa ccggcaggtt
     4141 atagctgatg gtacgcttat gctcagtaag cgtttcttcg aggaataccg ccacttcgat
     4201 ttcaatatcg tggccgcgtg tggcggggcg ttgacggctc tggcgggcat gctgaccgaa
     4261 aattgacgag aagatatcgt caaaatcttc ggcgttaaaa ctctgaccgt cgccatgatg
     4321 gaactgacgg ttaaattgcg gatcgttgcg atgttgccac atctgatcat actcagcgcg
     4381 acgttgttca tcacttaaca cttcccaggc ttcagcgacc tctttgaagc gggcttcggc
     4441 atccggttct ttgctgacat caggatggta tttgcgggcc agtcgacgat aggcggtctt
     4501 gattgtcttg agatcgtccg tcggtttcac gcccatgatg gcgtaataat cctttaattc
     4561 catagcgtta tctcgcgtaa atcaacacaa attgaaggaa cctctgtaag gtaactccta
     4621 taagtgtagg gtaatcctca aaatttcata tgccaacaca gaatatgtta ttgaaatcat
     4681 cgcggagagg aggtcgcctt aaggtggggc gctgaacata ttttaaacaa gtgaaaaagg
     4741 gtgagcgatt tttgatagtt gaaccaggca ctttaagt
//
LOCUS       DAJVTL010000218         4746 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.220, whole genome shotgun sequence.
ACCESSION   DAJVTL010000218 DAJVTL010000000
VERSION     DAJVTL010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4746
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.220"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..1559)
                     /locus_tag="OQQ26_004200"
                     /pseudo
     CDS             complement(1..1559)
                     /locus_tag="OQQ26_004200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310126.2"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
     gene            complement(1616..3989)
                     /locus_tag="OQQ26_004201"
                     /pseudo
     CDS             complement(1616..3989)
                     /locus_tag="OQQ26_004201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416012.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
     gene            complement(4027..>4746)
                     /locus_tag="OQQ26_004202"
     CDS             complement(4027..>4746)
                     /locus_tag="OQQ26_004202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HCS1859439.1"
                     /translation="NNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHA
                     VQVANASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDI
                     SSPADSRYVSQTPLIKSGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDHDR
                     WGDILSSGEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIM
                     VTHQPGVWNLADDICDISTVL"
BASE COUNT         1194 a         1104 c         1078 g         1370 t
ORIGIN      
        1 aatgatgtca gattctcagc cagcgtttct ttgctgctaa tttccgcctg tgggtcagcg
       61 tctactgtta acgataaatt tctgcctggg aagatgtaag ccgccagctt tttgttggcg
      121 tactcttttt ccagcgccag gatagccgca ggagacaatg cttttttggc ggcaagctca
      181 ttgtttacca tttgctccca aaatgcgtcc tggttctttc ttaactgctg ccatttttcc
      241 gccagacttt gcacggtaat ttgctgccac agacgtttcg aaagttgata tgtctcttcc
      301 ggcgacaaga acggcgtatt atttaatgag ctggatgcca ggcgactggt cagcatacgt
      361 aaatcacgtt cagcttgctg atcaaccgca tttttcagct aggtgaggcg ggtagatttg
      421 acatcatcga gttcttcagc agaaaaacca tgctgatcaa tggttgccaa ctctgccatt
      481 aatgcattcg cagcatcctg catattatcg tctcgtgcat ttacacggaa aaacagcgac
      541 tgataatcgg gtgcaatttt aacgctgcgc gcagtgccgc cagaaatagt cttcaactcg
      601 cccgactgta tgcgttcctg cagatgttga ttgaacaact gaactaacat gctccattca
      661 gcttgttcga caaagctttg ctcatcgttc acttgtacca ttggcaggcg ataatagagt
      721 gcgatgccgt tcacccggtt ttctttatca ttaatgatat taaagcgcag gtggttttcg
      781 gcttttgtcg gccagacgcg attttcagct gctttgttag ccggaagctt acttaaatta
      841 tcctttatca gcgccagcgc ttctttactg tcgatatcgc cgaccacgat aaaggtcata
      901 ttatttggtt gataccagcg ttgataaaat tggcgcaatt gtgccggtgt gaccgtggcg
      961 acagtatcca tcaggccgat aggttcacgg tctaaattac gggtatttgc cagcaggaaa
     1021 gggcggcgcg cctgagaggt gcgccatttc gcatcctgat gggcacgcca ttcctcagta
     1081 attacgccgc gttcagcgtc tacttcgagt ttttcaaagg ttgcggcatt actccattca
     1141 ctgaagattg ccatcacttg ttgcagattt tgtttctgcg tagtcggcag actcacctga
     1201 tacaccgttt cgtcatagct ggtataggca ttaacatcgc gaccaaaacg caggcccatt
     1261 gactcaaatg tttcgatgac tttattaccc ggccatgttt ttgtgccgtt aaacatcata
     1321 tgttctacaa aatgagccac gccgcgctca ttgtcttctt cctgcaatga accggtatga
     1381 atttgcagcc ataaatttac ctgatccttt ggttgagcat gcggataaat catatatcgc
     1441 aagccattgt ccagttgccc ggtaattaac ttttcatcct gcggtaaggc ggcggcaatc
     1501 agccgcccgg ggagcaacag agttgccact aacgtcagta agaaacagag gtttctcata
     1561 attatctcca tgcgaaaacc gggcgaattt acccggttaa gtaaaatccg aactattaaa
     1621 atttcatgct gacatcaagc cagaaagtac ggccactggc gtaggtcgcc acaccggtat
     1681 tcgttgtatc aacagcggtt ttgctatcca gtacattgag aatatcggca ctgatcgtca
     1741 ggttttgttg tttcagaaat tgtggcgtcc aggacaagcg ggtgtcccag gtcaggctgc
     1801 tatccagttt ttcgtcaaca tactgcttgt aatctgaata ttcgctgatg tattgcgcat
     1861 ttgtcttacc aaggataatg cgagctttac gcgcttcttg ccaggccagc gtattcgccc
     1921 acactaaccc gctcggttga tgcgtgaaat ccatgtttaa ggagatcttt aatgggttat
     1981 taaaatctgc cactggaacg ctatcgtaag agaccagatt accgttataa accacctggt
     2041 tatcaccggt attgctctcc tcataaccat tgtttaacga caagttgccc ttgctcttga
     2101 tatagctaaa gacaatttgt gggttaatat ctacctggcg gatatgcagg ggttcggcca
     2161 gttcaaaact gaggctgaac gaatgcgttt tggttttgcc atcgttgtta tattcagtaa
     2221 tggtggtttt agtcgcgctg tcggtacgac tgcttttgct gatttgatca tgcgcttcac
     2281 ggtaaacata gtttgcacgc gcaataacgt tcttaccgat tttctgctgc aatcccattg
     2341 ccagttcatc gttataaggc gttttcaaat cctgataacg cgtcagagtt ttattacctg
     2401 ataccgattc cgtccagcta ttgcggatat cacgtaatcc catatcaaga atattcccgc
     2461 catagtaacg gttataacct gctgtaatca ttgaggtttg attagcaaaa atatcccatt
     2521 ccgtcataaa gcgcggggag atattgtggt ttgacagata gttgtcatag tcataccgca
     2581 cgccgggcat taatgacaca ttacgccagc taatgcgatc cgccatatac agcgcgtagt
     2641 tgtcaattcc caggctgcct ttacctttat ggtaaatggt atggttagtt ttctttccgg
     2701 cagcattaat cacataggat tcagactggt tatggcgttc agtccacgca tcggaataga
     2761 tgtattccgc gccgaagtag ggttgatgcg aaacattacc cacggcgaat ttttgccagt
     2821 ccaggcgtgt tttgaaggtg taattatcta cagcctggga aatgtgtcct aatccgccac
     2881 gggtgcaacg ccctgtaata tcaccatatg tacatgaaag ttcggtgtac cagatgtcat
     2941 gatcgtgacg ggtataatca ctaatatgat cccaaccaac ggtggtacgc agtttggccc
     3001 atgcgagttg cgtatccata tcccatgcca gaccatagga tttattaccc atttcgcgat
     3061 cagactgcgg gaaggtgctg gtattataat cacggctgga gccggtatat tttaaggtta
     3121 aatcgtgggt aaagcggtcg ctggcaaacc aggtaaattt gctcaatgca gtatcgataa
     3181 cgtttttata ctgtgcccga ccggcgacaa tgccgtcatt cgaaacataa tccgcgcggg
     3241 tgatatcaga ctggcggcgc gataaaccgg cggtaacgcc gaagttatca gcgagttcct
     3301 gattaaacga caaggtataa aagttctttt taaaatctgg ggagtaataa gtacttcctg
     3361 aagagccttg attaaatgcg ctcttgttat tctcatcgat atgcgatgtt aaccagtccg
     3421 aacgcgtagt gcgataaccc aatttcacct tgctatcatc agcgttgaag cgtttgatct
     3481 ttgcatcaat taccccgcca ttgaagcgac caaattcaac cggcacaaaa ctgtcataaa
     3541 gcgtcacatt gtccagtaag ctgacatcaa gaaaataccc ctgtgacatc ccgctaatat
     3601 tggttgcact actggcatcg gactcattcg ctgggttcgg ggttattagt tgcactaatg
     3661 ccgtcaatca aataggcatt ctggtagggc gacgcaccgt gaatagagat tttctcaggg
     3721 cgaatatctc cctggttcaa cgaggtactt tgcgttgaat ccatgcgtac cgcagggttg
     3781 gttctcagca gatcgctgat attgccattc ccggtcggta aacgctcgat gctttcactg
     3841 gtgtaatgcg tgttgccgtt tacgggtaca gggacaggag catagaccgt catctcttca
     3901 aaaaaatgca tgtacatgtt tttgtcatcg acggcctgcg ccacatcagc gccacataaa
     3961 atgacgccag gaataagaac tcgcttcatt tatttatatc tccgtacagc agggctttta
     4021 ttgttgttat aaaaccgtgc taatgtcaca aatatcatca gccaggttcc agacaccggg
     4081 ttgatgtgta accataatga cgccgcttgt gggtagtttt tcacgcacta aacgcagtaa
     4141 gcgtatagcc tcttgttcct caagatgaga ggtagtttcg tcaagaaata tccatttcgg
     4201 acgtcgtaaa attaatcgtg ccagggcgat acgttgtttt tcgccgctgg aaagaatatc
     4261 tccccagcga tcgtggtcat gaatacgcgc agccaatttc cccagaccaa cctgatgcag
     4321 tacttcgctc aacgatttat cgtctacggg caggggaagt gctttacaaa taatctcttt
     4381 cagtaagccg cttttgatta acggtgtttg tgacacatac cgactgtcag caggagaaga
     4441 aatatcacct ttaaaccacg gccagcagtg ggataatgtt ttaagcagtg tggtttttcc
     4501 cgcaccagag tagcctttca gtaatagcca tttgcctggc gaaacatgaa agttcaagtt
     4561 ctctaatatg atcttattat caggcgtacg aatactcgca ttagccactt gtaccgcatg
     4621 ttggcaattt ttaggcttat tcgtagggcg ctgttcagtg agttgatgga actcatacaa
     4681 gcgatcgata accgcagcca gttcagcaag ttcgtcatat ttataaataa accagcttaa
     4741 attgtt
//
LOCUS       DAJVTL010000219         4699 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.221, whole genome shotgun sequence.
ACCESSION   DAJVTL010000219 DAJVTL010000000
VERSION     DAJVTL010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.221"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..874
                     /locus_tag="OQQ26_004203"
     CDS             <1..874
                     /locus_tag="OQQ26_004203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HCS1859440.1"
                     /translation="FSKEWKDASDKWNAMWGVKIEQTKDGKHYVAGIGLSMEDTEEGK
                     LSQFLVAANRIAFIDPANGNETPMFVAQGNQIFMNDVCLKRLTAPTITSGGNPPVFSL
                     TPDGKLTAKNADISGSVNANSGTLNNVTINENCTIKGMLEANQVRGDFVKTVSKSFPK
                     KAGTWGNTETPDGTVTVTISDDHNFDRQIIIPPIIFNGIAYDNPGSGNNPGGTRYTGY
                     GFEVRKNGVLIASRETKGAIPGSYSAVIDMPSGRGSVTLEFKIFQKGNQGAGNITDCT
                     VIVTKKAASGISIR"
     gene            944..1543
                     /locus_tag="OQQ26_004204"
     CDS             944..1543
                     /locus_tag="OQQ26_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HCS1859441.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEQQATLSAGYLHASTNVPG
                     SDDLNGINVKYRYEFTDTLGLVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGMAYSRVSTFSGDYIRVTDNKGKTHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF"
     gene            1608..3734
                     /locus_tag="OQQ26_004205"
     CDS             1608..3734
                     /locus_tag="OQQ26_004205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005010726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1859442.1"
                     /translation="MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTVASENPD
                     EAGRYSMNVEYGQYSVTLLVEGFPPSHAGTITVCEGSRPGTLNDFLGAMTEDDVCPEA
                     LRRFELMVEEVARNASAVAQNTAAAKKSARDAGTSASEAATNATDAAGSARAASTSAG
                     SAASSVSSASASKDEATKQASAAKGSATTASSKATESAGSATAAAQSKSAAESAAMRA
                     ETAAKRAEDIADVVSLEDASTTKKGIVQLSSATNSASESLAATAKAVKVVMDETNKKA
                     PLNSPALTGTPTTPTAPKGTNNTQIASTAYVMAAIAALVDSSPDALNTLNELAAALGN
                     DPNFATTMTNALAGKQPKDATLTALAGLATAADRFPYFTGNDVASLATLTKVGRDILA
                     KSTVAAVIEYLGLQETVNKADNAVQKTGDTLSGGLTFENDSILAWIRNTDWAKIGFKN
                     DSDADTDSYMWFETADNGNEYFKWRHRLAGGRVKDLMNLKWDTLNILVNAVINGCLGI
                     GTTNALGGSSIVLGDNDTGFKQNGDGLLDVYANGQHVFRFQNGVAIAFKNIQAGTARK
                     FTLSSANNSTKNAAFCLWGNPSRPVVAELGDDSGWHFFSQRNPDNSIVFTVNGQVIPL
                     NYGNFDARYKYRTEGVQDVRYGHEMYYSPGSNTVSWRFCAPSGHGLSGMAISDTGRNS
                     ADNVDGVYYRPLQKLINGTWYNVASI"
     gene            3737..4282
                     /locus_tag="OQQ26_004206"
     CDS             3737..4282
                     /locus_tag="OQQ26_004206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000902876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1859443.1"
                     /translation="MLHLKNITAGNPKTAEQYQMTKRYSVTWLFSEDGKNWYEELKNF
                     ASDTIKIAYTGDGRVVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFV
                     FDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFS
                     AITDKSSYNAIEWPVSPEGSS"
     gene            4306..>4699
                     /locus_tag="OQQ26_004207"
     CDS             4306..>4699
                     /locus_tag="OQQ26_004207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1859444.1"
                     /translation="MSVVISGALTDGAGIPMSGYHIILKSRVNTPEVVMHTVADVMTG
                     NDGEYCFHARTGKYGVYLKQDWRNEYNVGDIAVYEDSKPGTLNDFLIAPDEGDLKPDV
                     VKRFEEMVAQAQQSAGAAAGNAQQTAQDV"
BASE COUNT         1244 a         1072 c         1344 g         1039 t
ORIGIN      
        1 gttttcgaaa gagtggaagg acgccagtga taagtggaat gccatgtggg gcgtcaaaat
       61 tgagcagacc aaagacggca aacattatgt cgcgggtatt ggcctcagca tggaggacac
      121 ggaggaaggc aaactgagcc agtttctggt tgccgctaac cgtatcgcgt ttattgaccc
      181 ggcaaacggg aatgaaacgc cgatgtttgt ggcgcagggt aaccagatat tcatgaacga
      241 cgtgtgcctc aaacgcctga cggcccccac cattaccagt ggtggaaatc caccggtatt
      301 ttccctgaca ccggacggaa agctgaccgc taaaaatgcg gatatcagtg gcagtgtgaa
      361 tgcgaactcc gggacgctca acaacgtcac gataaatgaa aactgtacga ttaagggcat
      421 gctggaggcg aatcaggtca gaggtgattt tgttaaaaca gtatccaaat cattcccgaa
      481 aaaggctggt acgtggggta acacggaaac accagacggg acggttacag tcaccatcag
      541 cgatgatcat aactttgacc gtcaaatcat tattccgccc attatcttta acggtatagc
      601 gtatgacaat ccggggagcg gaaataaccc cggaggcacg cgatacacgg gttatggttt
      661 tgaagttcgc aaaaacggcg tattaatcgc atccagagaa actaaagggg ccattcccgg
      721 tagttacagt gcggttattg atatgccgag tggcagggga agcgtcactc tggagtttaa
      781 gattttccag aaaggcaatc agggggcagg gaatatcacc gattgtacgg tgattgtgac
      841 caaaaaagcg gcttccggta tcagtattcg ttgaaatatt tataacccat atacgggcgc
      901 cagaaatggc gcctttttta ttgcagaaaa gcgagaggta attatgcgta aagtttgtgc
      961 agccattttg tccgcagcca tctgtctggc cgtatccggt gcgcctgcat gggcgtctga
     1021 gcagcaggcc acgctgagcg cggggtatct tcatgcctcg acgaacgttc ccggcagtga
     1081 tgatctgaac gggattaacg tgaaataccg ttatgagttt acggacacac tggggctggt
     1141 gacgtcattc agctatgcag gagacaagaa tcgccagctt acccgttaca gcgatacccg
     1201 ctggcatgaa gattccgtgc gtaaccgctg gttcagcgtg atggcggggc cgtctgtgcg
     1261 cgtgaatgaa tggttcagcg cgtatgcgat ggcgggtatg gcttacagcc gtgtttcgac
     1321 tttctccgga gattatatcc gcgtaactga caacaagggg aaaacgcacg atgtgctgac
     1381 cggaagtgat gacggtcgcc acagcaacac gtctctggcg tggggggctg gcgtgcagtt
     1441 taacccgacc gaatccgtgg ccattgatat tgcttatgaa ggctccggca gtggtgactg
     1501 gcgcactgac ggtttcatcg tgggtgtcgg ttataagttc tgattagcca ggtaacacag
     1561 tgttatgaca gcccgccggt tcaggcgggc ttttttgtgg ggtgaatatg gcagtaaaga
     1621 tttcaggtgt actgaaagac ggcacaggaa aaccggtaca gaattgcaca atccagctga
     1681 aagcaaaacg taacagtacc acggtggtgg tgaacacggt ggcctctgaa aatccggatg
     1741 aagccgggcg ttacagcatg aatgttgagt atggccagta cagcgtcacc ctgctggttg
     1801 aaggttttcc gccttcacac gccggaacca ttaccgtctg tgaaggttcc agaccaggta
     1861 cgctgaatga ttttctcggt gccatgacgg aggatgatgt ctgtccggag gcactgcgac
     1921 gttttgaact gatggtggaa gaggtggcgc gtaacgcgtc cgcggtggca cagaatacgg
     1981 cagccgcgaa gaagtcagcc agggatgccg gcacatctgc cagtgaggcg gcaaccaatg
     2041 cgactgatgc tgcaggctca gcacgcgcag ccagcacgtc agccggttcg gcagcgtcat
     2101 cggtatcatc tgcgtctgct tcaaaagatg aggcgactaa acaggcgtca gcagcgaagg
     2161 gcagtgccac gacggcatcc tctaaggcga cagagtctgc aggcagtgcg acggcggcag
     2221 cgcagagcaa aagcgcggca gaatccgcgg caatgcgcgc tgagacagca gcaaaacggg
     2281 cagaggatat tgctgatgtc gtatctctgg aagatgcgag cacgacgaaa aaggggatag
     2341 tgcagctcag cagtgcgacc aacagtgcat ccgagtcact ggccgcgaca gcgaaagcgg
     2401 ttaaggtggt aatggatgaa acaaacaaga aagcgcccct gaacagtccg gctctgaccg
     2461 gaacgccaac cacacccact gcgccaaagg ggactaataa tactcagatc gccagtacgg
     2521 cttatgttat ggccgcgatt gctgccctcg tggactcgtc gcctgatgca ctgaacacgc
     2581 tgaatgaact ggcggcggcg ctgggcaacg acccgaattt tgcgaccacc atgactaacg
     2641 cgcttgcggg taagcaaccg aaagatgcca ctctgacggc gctggcgggg cttgctactg
     2701 cggcagacag gtttccgtat tttacgggga atgatgtcgc cagcctggca accctgacaa
     2761 aagtcgggcg ggatattctt gcgaaatcga ccgttgccgc cgttatcgaa tacctcggtt
     2821 tacaggaaac ggtaaacaag gctgataacg ctgtccaaaa gacaggcgat accttgtccg
     2881 gtggacttac ttttgaaaac gactcaatcc ttgcctggat tcggaatact gactgggcga
     2941 agattggatt taaaaatgat tcggatgcag acaccgattc ctacatgtgg tttgaaacgg
     3001 cggataacgg taatgaatat ttcaaatgga gacaccgcct cgctggcggc cgggttaaag
     3061 acctgatgaa tctcaaatgg gatacactaa atattctggt taatgccgtc attaatggtt
     3121 gccttggcat tggtacgacg aatgcgttag gtggaagttc aatcgtttta ggagataacg
     3181 ataccgggtt taaacaaaat ggcgatggtc tgctggatgt ttatgcgaat ggacagcatg
     3241 tatttcgttt tcagaatggc gtggctattg cttttaagaa tattcaggcc ggaactgcca
     3301 gaaaattcac gttatccagc gccaacaact ccacgaaaaa tgcagcgttt tgtttgtggg
     3361 gtaatccatc caggcctgtt gttgcagagc ttggtgatga ttcaggctgg cattttttca
     3421 gccagagaaa cccggataac agcatagtgt tcactgttaa cggacaggta attccgttaa
     3481 attacggaaa cttcgatgcc cgctataaat atcgaacaga gggggtacag gatgtacggt
     3541 atggccatga aatgtattac agccccggca gtaacaccgt ttcgtggaga ttttgcgcac
     3601 cttcgggaca cgggctgtca gggatggcga tatcggatac cggccgtaac tcagcggata
     3661 acgttgacgg tgtgtattac cgaccactgc aaaaactgat taatggcacc tggtataacg
     3721 tagcgagtat ttaacaatgt tgcatttaaa aaatattact gcgggtaatc cgaaaacagc
     3781 agaacaatat cagatgacaa aacgatattc ggtcacctgg cttttttcag aagacggaaa
     3841 aaactggtat gaagagctga agaatttcgc cagcgacaca ataaaaatag cttacaccgg
     3901 agacggtcgt gtggtgtggg tcggtaagga tgtgacaggc atcgagccac gcaatgccag
     3961 tgttattgaa gttcctgata ttaccgctaa ccgacggatt accgcgccgg gttactggtt
     4021 ttaccgcaat gatgaatttg tctttgacta cagactcaaa gcggaagatg agcgtgatgc
     4081 ccttctggct caggtcagtg cccggacagg ggaatgggaa gaagacctgc tgctggggtt
     4141 aatcagcgac gaagataaag aaaagctgaa agcctgtcgt atttacgcga aatcactgca
     4201 ggcgatggat ttcagcgcca tcactgataa atcctcatac aacgccattg aatggcccgt
     4261 ctctccggaa ggttcttcct gatttaattt atcgcgagaa aaacaatgtc tgtagtgata
     4321 tcaggtgcgc tgactgatgg cgcaggtatc cccatgtccg gataccatat tattctgaaa
     4381 tcccgggtaa acaccccgga agtggttatg cacactgttg ctgatgtgat gacaggaaac
     4441 gatggtgaat actgtttcca tgcgcggact ggaaaatatg gtgtgtatct gaaacaggac
     4501 tggcgcaacg agtacaacgt tggcgacatt gctgtatatg aggactcaaa gcccggcacg
     4561 ctgaatgact ttctgattgc tcctgatgag ggcgacctga aaccggatgt cgtcaaacgc
     4621 tttgaggaaa tggtggcgca ggcgcagcag agcgccgggg ccgcagccgg aaacgcacag
     4681 cagacggcgc aggatgtgg
//
LOCUS       DAJVTL010000220         4602 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.222, whole genome shotgun sequence.
ACCESSION   DAJVTL010000220 DAJVTL010000000
VERSION     DAJVTL010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4602
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.222"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..450
                     /gene="yadL"
                     /locus_tag="OQQ26_004208"
     CDS             <1..450
                     /gene="yadL"
                     /locus_tag="OQQ26_004208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein YadL"
                     /protein_id="HCS1859445.1"
                     /translation="DSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQ
                     IKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTETPATGSATQFSCVTPASQ
                     EVTISNAANAVVYYPMSARLVVEKNKTVSNVTAGKFSAPATFTVTYN"
     gene            477..1074
                     /locus_tag="OQQ26_004209"
                     /pseudo
     CDS             477..1074
                     /locus_tag="OQQ26_004209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414678.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
     gene            1127..2401
                     /locus_tag="OQQ26_004210"
     CDS             1127..2401
                     /locus_tag="OQQ26_004210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000848455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like adhesin"
                     /protein_id="HCS1859446.1"
                     /translation="MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQK
                     WRETGPNGDATVIFRYATSTNNLVFYKPTQLGPTGVKLQWSQLDTASGGGFLYCNRSD
                     STSGSAMRIENAMVDSGKMYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIY
                     IGDSAEQYFSWYNPSEDVLYWSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQ
                     QIKLSSSSNYLYSFKAYGAGQGINEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTG
                     STVKMGEYSAEQIRNGATPVPFDISLQNCVRVTNIETKLVSTKVGTENGQLLGNTLTG
                     NDAAKGVGVLIEGLATSKNPLMTLKPNDSNSVYKDYDPRGKDDTTGGVYPDQDTGITY
                     PLHFQATLQQDGTIPIEAGEFKATSTFQVTYP"
     gene            2514..3308
                     /gene="panB"
                     /locus_tag="OQQ26_004211"
     CDS             2514..3308
                     /gene="panB"
                     /locus_tag="OQQ26_004211"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000805487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HCS1859447.1"
                     /translation="MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
                     DSLGMTVQGHDSTLPVTVADIAYHTASVRRGAPNCLLLADLPFMAYATPEQAFENAAT
                     VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
                     DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
     gene            3320..4171
                     /gene="panC"
                     /locus_tag="OQQ26_004212"
     CDS             3320..4171
                     /gene="panC"
                     /locus_tag="OQQ26_004212"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HCS1859448.1"
                     /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
                     TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
                     KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
                     ERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
                     NKMVELA"
     gene            complement(4245..>4602)
                     /gene="rpnC"
                     /locus_tag="OQQ26_004213"
     CDS             complement(4245..>4602)
                     /gene="rpnC"
                     /locus_tag="OQQ26_004213"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnC"
                     /protein_id="HCS1859449.1"
                     /translation="RQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADL
                     FYGVLRDRETGGKSMMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAE
                     MANLPLAEIDKVINLI"
BASE COUNT         1274 a         1062 c         1062 g         1204 t
ORIGIN      
        1 gactctgatc aggacatttc tgttgttgac tttggcgatg tatatatttc tgaaatcaat
       61 gccaagacca aagttaaaac attcaaactc aaattcaaag actgtgcggg tatccccaat
      121 aaaaaagcac aaataaaatt aaccaagcga gccacatgcg aaggtactgc taatgacggt
      181 gcggggttcg caaatggatc cacagccgca gataaagcaa gtgccgtcgc cgttgaagtc
      241 tggagcaccg aaactccggc aacaggtagc gcaacacaat ttagttgtgt gacaccagca
      301 tctcaagagg tcactatctc caatgcagcc aacgcggttg tttattatcc gatgagtgct
      361 cgactggtcg tcgaaaaaaa taaaaccgta agcaatgtca ctgcgggtaa attttctgca
      421 cctgccacat ttacagtaac ctataactaa cagactgaca gatccaggaa ctatatatgc
      481 atcccactca acgtaagctg atgaagagaa taattctgtt tctgtcacta cagtttccct
      541 attacctatc cagccatcgc tgggcaggat attgaccttg ttgccaatgt aaaaaacagc
      601 acttgcaaaa gcggaatcag taaccagggt aatattgatc ttggcgtcgt tggggtggga
      661 tatttttcag ataatgttac tcctgaaagc tatcaaccag gtggaaaaga gttcactgtc
      721 acagtatcag actgtgcatt acagggaact ggcgatgtgc ttaatcagtt acatattgat
      781 tttagagccc ttagcggtgt catggctgca ggttcaaggc aaatatttgc caatgaagtc
      841 gcaaccgggg ctaaaaatgt cggtgtcgtt ctcttttcca ttcaggaccc gaccaatata
      901 ttcaatgtta ttagttcagc aggaaattct cgttccgtgt atccagtaat gacttctgcc
      961 ctgcataatt cttcatggaa attttatgcc agaatgcaaa aaatcgatcc cgcgctggat
     1021 gtcatatctg gccaggtaat gagtcatata ttagttgatg tgtactacga ataatagatc
     1081 aaaacaaata actgcgactg ttacagcagt agatggtgga gtgataatga agaaattctt
     1141 cagacatttt ctttttttaa ttctgtgctt gagttgttat accgcgagtg ctggcactga
     1201 tgataacgta ggatatattg ttgggaatag ttacggcgtt ggtccgtcag atcaaaaatg
     1261 gagagaaacg gggccgaatg gcgatgctac tgtcatattc agatatgcaa caagtacaaa
     1321 taatttagtt ttctacaaac cgacgcagct tggacctaca ggtgtaaaat tacagtggag
     1381 tcagttagat accgcttctg gtggtggttt tctttattgc aacagaagtg atagcacaag
     1441 tggtagcgca atgcgtattg aaaatgcaat ggttgactca ggtaaaatgt atggctccca
     1501 taaattattt aatacatcag ttcctggttt gtattacaca ttattaattt caaacatgtg
     1561 gtcagcttac ggtaccgtaa ctaacgttag ttcacctggg atatacattg gtgactctgc
     1621 agaacaatat ttttcgtggt ataatccaag cgaagacgtg ttatattgga gttgcaataa
     1681 tgcgaatagc acccgtaaat actgggctgt aggtggtatt tatcagaccc ttacaattga
     1741 attctataca gatacaaact ttgatccaac agtaactcaa cagatcaaat tatccagctc
     1801 atcaaattat ctgtattcat ttaaagccta tggcgcaggc caaggtataa atgagcatag
     1861 ttattttatc aaaatcgatt tcgatctgct caatgtcaag ttgactaatc ccacttgttt
     1921 taccgctatg cttagtggaa cttctgtgac tggttctacg gtaaaaatgg gtgaatatag
     1981 tgcagaacaa atcagaaacg gtgccacacc ggttcctttt gatatttcac ttcaaaactg
     2041 cgttcgtgtg actaatattg agacaaaatt agtttcaaca aaggttggta ctgaaaacgg
     2101 gcaactcctt ggtaatactc tcacaggtaa tgacgcagca aaaggagtcg gtgtactcat
     2161 agaaggttta gcaactagta aaaatcctct aatgacattg aaacctaatg attcaaattc
     2221 tgtttataaa gattacgacc cgagaggcaa agacgataca acaggaggag tttacccgga
     2281 tcaagataca ggtataacat accctctcca tttccaggcc acgctacaac aggatggaac
     2341 tataccaata gaagctggtg agtttaaagc caccagtact ttccaggtaa cctaccctta
     2401 ataagtccac cgcaccgcca tcatctggcg gtgcggtaat tgataaatca ttgcccccac
     2461 caatgtgact gataaaatgc caggcaacac gacatcattt atcaggatac gttatgaaac
     2521 cgaccaccat tgcttcactt cagaaatgta agcaggataa aaagcgtttc gcgaccatca
     2581 ccgcttacga ctacagcttc gcgaaactat ttgctgatga aggacttaac gtcatgctgg
     2641 taggcgactc gctgggcatg acggttcagg gtcacgactc caccttgccg gtgaccgttg
     2701 ccgatatcgc ctaccacact gcctccgtac gtcgtggtgc gccaaactgc ctgctgttgg
     2761 ctgacctgcc gtttatggcg tatgccacgc cggaacaagc ctttgaaaac gccgcaacgg
     2821 ttatgcgtgc cggtgccaat atggtcaaaa ttgagggcgg tgagtggctg gtcgaaaccg
     2881 taaaaatgct gaccgaacgt gccgttcctg tatgtggtca cttaggttta accccacagt
     2941 cagtgaatat tttcggtggc tacaaagttc aggggcgcgg cgatgaagcg ggcgatcaac
     3001 tgctcagcga tgcattagcc ttagaagccg ctggggcaca gttgctggtg ctggaatgcg
     3061 tgccggttga actggcaaaa cgtattaccg aagcactggc gatcccggtt attggcattg
     3121 gcgcaggcaa cgtcactgac gggcagatcc tcgtgatgca cgacgccttc ggcattaccg
     3181 gcggtcacat tcctaaattc gctaaaaatt tcctcgccga aacgggcgac atccgcgcgg
     3241 ctgtgcggca gtatatggct gaagtggagt ccggcgttta tccgggcgaa gaacacagtt
     3301 tccattaagg agtcacgttg tgttaattat cgaaaccctg ccgctgctgc gtcagcaaat
     3361 tcgccgcctg cgtatggaag gcaagcgcgt ggcgctggtg cctactatgg gtaatctgca
     3421 cgatggccat atgaagctgg tcgacgaagc caaagcccgc gccgatgtgg tcgtcgtcag
     3481 tattttcgtt aacccgatgc agttcgaccg cccggaagat ctggcacgtt atccacggac
     3541 cttgcaggag gactgcgaga agctaaacaa acgtaaagtg gatttagttt tcgccccttc
     3601 ggtaaaagag atctacccga acggtactga aacccacact tacgttgacg ttcctggcct
     3661 ttcgaccatg ctggaaggtg ccagccgtcc gggacatttt cgcggcgttt cgactattgt
     3721 cagcaagctg ttcaacctgg tccagccgga catcgcctgc ttcggtgaaa aagattttca
     3781 gcaactggcg ctgatccgca aaatggttgc cgatatgggc ttcgatattg agattgtcgg
     3841 tgtgccaatt atgcgcgcca aagacggtct ggcgctaagt tcccgtaacg gttatctgac
     3901 ggcggaacaa cgcaaaattg cgcctggtct gtacaaagtt ttaagttcga ttgctgacaa
     3961 attgcaggct ggggaacggg atctcgatga aattattacc attgcggggc aagaactgaa
     4021 tgaaaaaggc ttccgcgccg atgatattca gattcgcgat gccgacacat tgctggaagt
     4081 ttctgaaacc agcaaacggg cagtaattct ggtagccgcc tggcttggcg atgctcgcct
     4141 gatcgacaac aaaatggtcg agctggcgta atacttaact ggcgctacgg ctgatggcgc
     4201 cagttattaa tttaccccac gtcatctgtc ataacacagg taacttaaat aaggttaatt
     4261 accttatcaa tctcagcaag aggtaaattt gccatctctg caacgtcttc ccgagacatt
     4321 cctttactta gaagacgcag ggcgaattct tgcctttcct cctgtcttcc ctgctgaatc
     4381 cccttctcaa tccctttctc ttcaaaccac tgcgccagcg tcatcataga cttccctccc
     4441 gtttccctgt ctctcagcac accataaaac aaatccgctt gttcagtatg accgcgttgc
     4501 agcatatagt tttgcatggc aactaactga cttccgctag tgtacccttc gtcaatcagc
     4561 gtgaccagtt gctccagcaa taacattaag tcgcgctggc ga
//
LOCUS       DAJVTL010000221         4591 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.223, whole genome shotgun sequence.
ACCESSION   DAJVTL010000221 DAJVTL010000000
VERSION     DAJVTL010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4591
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.223"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(213..356)
                     /locus_tag="OQQ26_004214"
     CDS             complement(213..356)
                     /locus_tag="OQQ26_004214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001421454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859450.1"
                     /translation="MEHRSVIHGELAIDHDAILQCAEEVLHHCVIQTVSFVRHILRYS
                     MGL"
     gene            608..4495
                     /gene="sat"
                     /locus_tag="OQQ26_004215"
     CDS             608..4495
                     /gene="sat"
                     /locus_tag="OQQ26_004215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001034089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease autotransporter toxin Sat"
                     /protein_id="HCS1859451.1"
                     /translation="MNKIYSLKYSAATGGLIAVSELAKRVSGKTNRKLVATMLSLAVA
                     GTVNAANIDISNVWARDYLDLAQNKGIFQPGATDVTITLKNGDKFSFHNLSIPDFSGA
                     AASGAATAIGGSYSVTVAHNKKNPQAAETQVYAQSSYKVVDRRNSNDFEIQRLNKFVV
                     ETVGATPAETNPTTYSDALERYGIVTSDGSKKIIGFRAGSGGTSFINGESKISTNSAY
                     SHDLLSASLFEVTQWDSYGMMIYKNDKTFRNLEIFGDSGSGAYLYDNKLEKWVLVGTT
                     HGIASVNGDQLTWITKYNDKLVSELKDTYSHKINLNGNNVTIKNTDITLHQNNADTTG
                     TQEKITKDKDIVFTNGGDVLFKDNLDFGSGGIIFDEGHEYNINGQGFTFKGAGIDIGK
                     ESIVNWNALYSSDDVLHKIGPGTLNVQKKQGANIKIGEGNVILNEEGTFNNIYLASGN
                     GKVILNKDNSLGNDQYAGIFFTKRGGTLDLNGHNQTFTRIAATDDGTTITNSDTTKEA
                     VLAINNEDSYIYHGNINGNIKLTHNINSQDKKTNAKLILDGSVNTKNDVEVSNASLTM
                     QGHATEHAIFRSTANHCSLVFLCGTDWVTVLKETESSYNKKFNSDYKSNNQQTSFDQP
                     NWKTGVFKFDTLHLNNADFSISRNANVEGNISANKSAITIGDKNAYIDNLAGKNITNN
                     GFDFKQTISTNLSIGETKFTGGITAHNSQIAIGDQAVVTFNGATFLDNTPISIDKGAK
                     VIAQNSMFTTKGIDISGELTMMGIPEQNSKTVTPGLHYAADGFRLSGGNANFIARNMA
                     SVTGNIYADDAATITLGQPETETPTISSAYQAWAETLLYGFDTAYRGAITAPKATVSM
                     NNAIWHLNSQSSINRLETKDSMVRFTGDNGKFTTLTVDNLTIDDSAFVLRANLAQADQ
                     LVVNKSLSGKNNLLLVDFIEKNGNSNGLNIDLVSAPKGTAVDVFKATTRSIGFSDVTP
                     VIEQKNDTDKATWTLIGYKSVANADAAKKATLLMSGGYKAFLAEVNNLNKRMGDLRDI
                     NGESGAWARIMSGTGSAGGGFSDNYTHVQVGADNKHELDGLDLFTGVTMTYTDSHAGS
                     DAFSGETKSVGAGLYASAMFESGAYIDLIGKYVHHDNEYTATFAGLVTRDYSSHSWYA
                     GAEVGYRYHVTDSAWIEPQAELVYGAVSGKQFSWKDQGMNLTMKDKDFNPLIGRTGVD
                     VGKSFSGKDWKVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRMLMNVGLNAE
                     IRDNLRFGLEFEKSAFGKYNVDNAINANFRYSF"
BASE COUNT         1483 a          916 c          993 g         1199 t
ORIGIN      
        1 gagtacttgc tacagggtaa aaaggggtac ctgtcgctgg ttctccgttc agttttaccg
       61 ggagattttc tcctgcgcct gtcataaagt ccggtaatgg agattgttaa tacgatggtg
      121 cacgatgcat tgtcagtgcc cggcccggag gatgccccgt agctacatac ggatcagggt
      181 tggcaatatc gaatggcagg ctataggcaa agttaaagcc ccatggagta gcgcaaaata
      241 tgccgcacaa aggaaacggt ctgaataacg cagtgatgga gaacttcttc ggcacactgc
      301 aaaatcgcat cgtggtcgat cgctaattcg ccgtgaatca ctgaacgatg ttccatgcga
      361 acagatattc gatcatatcg aaatattaaa cattacccct ccccgcattg ggcaaaaaaa
      421 aaaacaaaaa acgatcaatt aacgatcaat tagtattgat tcacataatc tctcatcatt
      481 aatgagaaca ttgtcacata tttacaatat agaactgtta cttttagcaa gctgttagta
      541 atcaactgtt actaataatt ttaattctta atactttgtt cattcaataa atgagttgag
      601 agaatatatg aataaaatat actcccttaa atatagtgct gccactggcg gacttattgc
      661 tgtttctgaa ttagcgaaaa gagtttctgg taaaacaaac cgaaaacttg tagcaacaat
      721 gttgtctctg gctgttgcag gtacagtaaa tgcagcaaat attgatatat caaatgtatg
      781 ggcgagagac tatcttgatc ttgcacaaaa taaaggtatt ttccagcccg gagcaacaga
      841 cgtaacaatc actttaaaaa acggagataa attctctttc cataatctct caattccgga
      901 tttttctggt gcagcagcga gtggcgcagc taccgcaata ggaggttctt atagtgttac
      961 tgttgcacat aacaaaaaga accctcaggc cgcagaaact caggtttacg ctcagtcttc
     1021 ttacaaggtt gttgacagaa gaaattccaa tgattttgag attcagaggt taaataaatt
     1081 tgttgtggaa acagtaggtg ccaccccggc agagaccaac cctacaacat attctgatgc
     1141 attagaacgc tacggtatag tcacttctga cggttcaaaa aaaatcatag gttttcgtgc
     1201 tggctctgga ggaacatcat ttattaatgg tgaatccaaa atctcaacaa attcagcata
     1261 tagccatgat ttgttaagtg ctagtctatt tgaggtcacc caatgggact catacggcat
     1321 gatgatttat aaaaatgata aaacatttcg taatcttgaa atattcggag acagcggctc
     1381 tggagcatac ttatatgata acaaactaga aaaatgggta ttagtcggaa caacccatgg
     1441 tattgccagc gttaatggtg accaactgac atggataaca aaatacaatg ataaactggt
     1501 tagtgagtta aaagatacct atagtcataa aataaatctg aatggcaata atgtaaccat
     1561 taaaaacaca gatataacat tacaccaaaa caatgcagat accactggta ctcaagaaaa
     1621 aataactaaa gacaaagata ttgtgttcac aaatggggga gatgtcctgt ttaaggataa
     1681 tttggatttt ggtagcggtg gtattatctt tgacgaaggc catgaatata acataaacgg
     1741 tcagggattt acatttaaag gagcaggaat tgatatcgga aaagaaagca ttgtaaactg
     1801 gaatgcattg tattccagtg atgatgtttt acacaaaata ggccccggta ctctgaatgt
     1861 tcaaaaaaaa cagggggcaa atataaagat aggtgaagga aatgttattc ttaatgaaga
     1921 aggaacattt aacaatatat accttgcaag cggaaatggt aaggtaatac taaataaaga
     1981 taattccctt ggcaatgatc aatatgcggg gatatttttt actaaacgtg gtggcacgct
     2041 agatttaaat ggacacaatc agacttttac tagaattgcc gccactgacg atggaacaac
     2101 aataactaac tcagatacaa cgaaagaagc cgttctggca atcaataacg aagactccta
     2161 catatatcat gggaacataa atggcaatat aaaactaacg cacaatatta attctcagga
     2221 taagaaaact aatgcaaaat taattctgga tggtagtgtc aacacaaaaa atgatgttga
     2281 agtcagtaat gccagtctta ccatgcaagg ccatgcaaca gagcatgcaa tattcagaag
     2341 cacagcgaat cattgctccc tggtatttct ttgtggaacg gactgggtca ccgttttgaa
     2401 agaaacagag agttcatata ataaaaagtt caattctgat tacaaaagta ataatcagca
     2461 gacctcattt gatcagccta actggaaaac cggggtgttt aaatttgata cattacacct
     2521 gaacaatgct gacttttcaa tatcacgcaa tgccaatgtt gaaggaaata tatcagcaaa
     2581 taaatcagct atcacaatcg gcgataaaaa tgcttacatt gataatcttg cagggaaaaa
     2641 tattactaat aatggttttg acttcaaaca aactatcagt actaatctat ccataggaga
     2701 aactaaattt acaggtggca tcactgcaca taacagccaa atagccatag gtgatcaagc
     2761 tgtagttaca tttaatggtg caacctttct ggataatact cctataagta tagataaagg
     2821 agcaaaagtt atagcacaaa attccatgtt cacaacaaaa ggtattgata tctccggtga
     2881 actgactatg atgggaatcc ctgaacagaa tagtaaaact gtaacgccgg gtctccacta
     2941 cgctgctgat ggattcaggc tgagtggtgg aaatgcaaat ttcattgcca gaaatatggc
     3001 atctgtcacc ggaaatattt atgctgatga tgcagcaacc attactctgg gacagcctga
     3061 aactgaaaca ccgactatat cgtctgctta tcaggcatgg gcagagactc ttttgtatgg
     3121 ctttgatacc gcttatcgag gcgcaataac agcccccaaa gctacagtta gcatgaataa
     3181 tgcgatctgg catctaaata gccagtcatc aattaatcgt ctagaaacaa aagacagtat
     3241 ggtgcgtttt actggtgata atgggaagtt tacaaccctt acagtggaca accttactat
     3301 agatgacagt gcatttgtgc tgcgtgcaaa tctggcccaa gcagatcagc ttgttgtcaa
     3361 taaatcgttg tctggtaaaa acaaccttct gttagtcgac ttcattgaga aaaatggaaa
     3421 cagcaacgga ctgaatatcg atctggtcag cgcaccaaaa ggaactgcag tagatgtctt
     3481 taaagctacg actcggagta ttggcttcag tgatgtaaca ccggttatcg agcaaaagaa
     3541 cgatacagac aaagcaacat ggactctgat cggctataaa tctgtggcca acgccgatgc
     3601 ggctaaaaag gcaacattac tgatgtcagg cggctataaa gccttccttg ctgaggtcaa
     3661 caaccttaac aaacgtatgg gtgatctgcg tgacattaac ggtgagtccg gtgcatgggc
     3721 ccgaatcatg agcggaaccg ggtctgccgg cggtggattc agtgacaact acacccacgt
     3781 tcaggtcggt gcggataaca aacatgaact cgatggcctt gacctcttca ccggggtgac
     3841 catgacctat accgacagcc atgcaggcag tgatgccttc agtggtgaaa cgaagtctgt
     3901 gggtgccggt ctctatgcct ctgccatgtt tgagtccgga gcatatatcg acctcatcgg
     3961 taagtacgtt caccatgaca acgagtatac cgcaactttc gccggccttg tcaccagaga
     4021 ctacagctcc cactcctggt atgccggtgc ggaagtcggt taccgttacc atgtaactga
     4081 ctctgcatgg attgagccgc aggcggaact tgtttacggt gctgtatccg ggaaacagtt
     4141 ctcctggaag gaccagggaa tgaacctcac catgaaggat aaggacttta atccgctgat
     4201 tgggcgtacc ggtgttgatg tgggtaaatc cttctccggt aaggactgga aagtcacagc
     4261 ccgcgccggc cttggctacc agtttgacct gtttgccaac ggtgaaaccg tactgcgtga
     4321 tgcgtccggt gagaaacgta tcaaaggtga aaaagacggt cgtatgctca tgaatgttgg
     4381 tctcaacgcc gaaattcgcg ataatcttcg cttcggtctt gagtttgaga aatcggcatt
     4441 tggtaaatac aacgtggata acgcgatcaa cgccaacttc cgttactctt tctgataaca
     4501 gcccgggccg cgtttgcggc ccttcttcta ccggagagaa tatgtattga ggtgtactgg
     4561 caatagcgga cactaccatt tgttcttttt t
//
LOCUS       DAJVTL010000222         4471 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.224, whole genome shotgun sequence.
ACCESSION   DAJVTL010000222 DAJVTL010000000
VERSION     DAJVTL010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4471
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.224"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(570..1604)
                     /locus_tag="OQQ26_004216"
     CDS             complement(570..1604)
                     /locus_tag="OQQ26_004216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001752368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCS1859452.1"
                     /translation="MSKKKGKTPQPAAKTMTASAPKMEVFTFGEPVPVLDRRDILDYV
                     ECISNSRWYEPPISFTGLAKSLRAAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFV
                     LDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDVYWWVPSFNEPTAFAPGSV
                     FHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDR
                     NDIETLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAAD
                     LLDAHRIPFQLMGGKPENVGSLGDIEKVAKVFVRNELIPLQDRIREINGWLGQEVIRF
                     KNYSLDTDNG"
     gene            complement(1604..3375)
                     /locus_tag="OQQ26_004217"
                     /pseudo
     CDS             complement(1604..3375)
                     /locus_tag="OQQ26_004217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001357052.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
     gene            3549..4403
                     /locus_tag="OQQ26_004218"
     CDS             3549..4403
                     /locus_tag="OQQ26_004218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001074418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HCS1859453.1"
                     /translation="MAKKVSKFFRIGVEGDTCDGRVISAQDIQEMAETFDPRVYGCRI
                     NLEHLRGILPDGIFKRYGDVVELKAEKIDDDSALKGKWALFAKITPTDDLIAMNKAAQ
                     KVYTSMEIQPNFANTGKCYLVGLAVTDDPASLGTEYLEFCRTAKHNPLNRFKLSPENL
                     ISVATPVELEFEDLPETVFTALTEKVKSIFGRKQASDDARLNDVHEAVTAVAEHVQEK
                     LSATEQRLAEMETAFSALKQDVTDRADETGQAFTRLKNSLDSTESLTQQRRSKATGGG
                     GDALMTNC"
BASE COUNT          990 a         1159 c         1257 g         1065 t
ORIGIN      
        1 gcagagatga tttggaaagt atcttttcta aaaatcttgt tttgactatc gatgttcttt
       61 ttaacagaaa gagtggggca accttaagac ataaattagc acatggtaat ttatatacta
      121 atgcttgtta cgatgaaaca acgacatatg catgcatcct gattttcttt ctgtgtgctt
      181 atcctctcct accatatttt gatactgttt ttgaacaggg ctctgtttga taacgtatac
      241 gttgaggcat aaaacctatg catacttagc tgcatcaatt tgcacgaggt atttcagtat
      301 gcattttctg cgtaatagta gggattgctt ggtttggtag ttgtaattca actgcattca
      361 aaccgaccca tgaagcgggc gggcgaggcg gggaaagcac tgcgcgctgg cggtggtgct
      421 gattttattt tttcagcgtc tcagcgcgtc gtgacggcgc ttagtctgcc cgttggggtg
      481 ttggtgtgtc tgcgggctgt tttgtgctgt ggtgagcgtg tgagggcgtg atgacgggat
      541 gtaaaaaagc cgcccgcagg cggcgatgtt cagccgttgt cagtgtccag tgagtagttt
      601 ttaaagcgga tgacctcctg accgagccag ccgtttatct cgcggatcct gtcctgtaac
      661 gggataagct cattgcggac aaagaccttt gccactttct caatatcacc cagcgacccg
      721 acgttctccg gcttgccgcc catcaactga aaggggatgc ggtgcgcgtc aagcaggtca
      781 gcggcgctgg cttttttgat attaaaaaaa tcgtccttcg ttgccacttc actgagcggg
      841 ataattttaa tgccgtcggc ttttccctgt ggggcataga gaaacaggtt tttaaagttg
      901 ttgcggcctt tcgacttcac catgttttcg cgaagcgttt cgatatcgtt gcgatcctgc
      961 acggcatcag tgacgtacat gatatatccg gcatgagcgc cgttttcgta atacttgcgg
     1021 cggaacagcg tggccgactc attcagccag gcagaattaa gggcgctgag atattccggc
     1081 agaccgtaca gctcctgatt aatatccggc tccagcaggt gaaacacgga tccgggcgcg
     1141 aaggctgtcg gctcgttaaa ggacggcacc caccagtaaa catcctcctc cacgccacgg
     1201 cgggtatatt ttgccggtga ggtttccagt ctgatgacct taccggtggt gctgtaacgc
     1261 ttttccagaa acgcattacc gaacaccaga aaatccagca caaagcggct gaaatcctgc
     1321 tgggacagcc acgggtgcgg gataaacgtt gaagccagaa tattacgttt gacgtaaatc
     1381 ggtgagctgt gatgcacggc agcacgcagg ctttttgcca gaccggtaaa gctgattggt
     1441 ggctcatacc atctgctgtt actgatgcat tcgacgtaat ccagaatgtc acggcggtcg
     1501 agtaccggca ccggctcacc aaaggtgaat acctccattt tcggggcgct ggcggtcatt
     1561 gtttttgccg caggttgcgg tgttttccct tttttcttgc tcatcagtaa aactccagaa
     1621 tggtggatgt cagcggagtg ctgataccgg cggtgagtgg ctcatttaac agggcgtgca
     1681 tggtcgccca ggcgaggtcg gcgtggctgg cttcctcgct gcggctggcc tcataggtgg
     1741 cctgcgtccg ctgctggtca tggtcttgcg gatagccatg aacgagctgg tgatgtcggt
     1801 ggcgctgacg tcatattcca gacagccacg gcggataacg tcttttgcct tgagcaccat
     1861 tgcggttttc atttccggcg tgtagcggat gtcgcgcgcg gcgggataga acgagcgcac
     1921 aagctggaac acgccgacac cgaggccggt ggcatcaata ccgatgtatt cgacgttgta
     1981 tttttcggtg agtttgcgga tggattccgc ctgggtggca aagtccatac ctttccactg
     2041 gtgacgctca agtattctga atttgccacc ggccaccacc ggcggtgcca gtaccacgca
     2101 tccggcgctg tcgccacggt gtgacgggtc gtaaccaatc cataccggtc gggagccgaa
     2161 cggattggcg gcaaacggcg catagtcttc ccattcttcc agcgtgtcga ccatgcagcg
     2221 ttgcagctcc tcgaacggga ataccgatgc cttgtcgtca acaaattcac acatgaacag
     2281 gtttttaaaa tcgtcggcgc tgttttcgcg tttaagcggc tcaatgtcga acagcgtgca
     2341 gccacctttc agggcgtcct caatggtgac aatctgccgc cactggccgt ccgcacagag
     2401 aagcccaccg gcaagggcgt tatgactgat gtcgatttcc acgcgttcgg cggcgctggc
     2461 gcgtccccgg ttaaacagtt cacccgacca gaacgggtag gcgtcgtgcg ccagcgtgga
     2521 cggggtggag aaataggtcg agcgcaggtg actctgtgag gccatacctg atgccatctt
     2581 acgcagtacc tgaaaattcg ggatccagaa catctcgtcg acgtacaggt cgccgttatg
     2641 gctctgcgcg gtgttggagt tggtgccgag aaaaatcagt tttgcgccgt tattgcccag
     2701 gacaatcggg tcaccggtca ggtcaacgtc aaccagccgg gcaaaggcga tgatgtattc
     2761 gcggaacaca tacgcctgtg ttttactggc cgacagaaaa atctggttat gaccggtttt
     2821 cagggcgcgc agcagcgcct cgcgggaaaa ataaaacgtc gcgccaatct ggcgggattt
     2881 caggatatcg cggatgcggt gctcaagccc ggcgcgatac cagtgcaact gatattcgaa
     2941 agactgctca aagaaaatct gctccagctt ttcgatggct tcgtcactga aaaaattctt
     3001 tttcggtttg cgacgcccgc ctttgttgcg gttagcgacg ttcggattaa ggtctgcctc
     3061 gttgccggtc tgactgtagc ggttgacccg cgccagtcgt tcaatctggc gtcccagcag
     3121 gtcaatttcc ttgaagtcac cgccggtttt ctgcggtttg ataatgagct gggtcagccg
     3181 cgcttccaga ctcatttcga cacggctgat gggggcaacg ctgtcccagc cgtcgcgctg
     3241 tttccagctc tgcaccgtcg ggcgtttcat ctgcaacatg gcggcaatct gcggcacgga
     3301 aaacccctgc cagtacagca gcgccgcctg acgacgcggg tcgtgcaaaa gagtggtgtc
     3361 tgtggtgatg gtcatgaata cctcgccgtg atgaatacac ggcaaggcta ctgagtcgcg
     3421 ccccgcgatt cgctaaggtg ctgttgtgtc agtgataagc catccgggac tgatggcgga
     3481 ggatgcgcat cgtcgggaaa ctgatgccga catgtgactc ctctaatcac tattcaggac
     3541 tcctgacaat ggcaaaaaaa gtctcaaaat tctttcgtat cggcgttgag ggtgacacct
     3601 gtgacgggcg tgtcatcagt gcgcaggata ttcaggaaat ggccgaaacc tttgacccgc
     3661 gtgtctatgg ttgccgcatt aacctggaac atctgcgcgg catcctgcct gacggtattt
     3721 ttaaacgtta tggcgatgtg gtcgaactga aggccgaaaa gattgatgac gattcggcgc
     3781 tgaaaggcaa atgggcgctg tttgcgaaaa tcaccccgac cgatgacctt atcgcgatga
     3841 acaaggccgc gcagaaggtc tacacctcaa tggaaattca gccgaacttt gccaacaccg
     3901 gcaaatgtta tctggtgggg ctggccgtca ccgatgaccc ggcaagcctc ggcacggaat
     3961 atctggagtt ctgccgcacg gcaaaacaca accctctgaa ccgcttcaaa ttaagccctg
     4021 agaaccttat ttcagtggca acgcccgttg agctggaatt tgaagacctg cctgaaaccg
     4081 tgttcaccgc cctgaccgaa aaggtgaagt ccatttttgg ccgcaaacag gccagcgatg
     4141 acgcccgcct gaatgacgtg catgaagcgg tgaccgctgt tgctgaacat gtgcaggaaa
     4201 aactgagcgc cactgagcag cgcctcgctg agatggaaac cgccttttcc gcacttaagc
     4261 aggatgtgac tgacagggcg gatgaaaccg gccaggcatt cacccgcctg aaaaacagtc
     4321 tcgacagcac cgaaagtctg acccagcagc gccgcagcaa agccaccggc ggtggcggtg
     4381 acgccctgat gacgaactgc tgaccggcgt cagtcagtcc gggaaaacct tcacgattaa
     4441 cccttaattt caggaaaaac tatgcgccag g
//
LOCUS       DAJVTL010000223         4466 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.225, whole genome shotgun sequence.
ACCESSION   DAJVTL010000223 DAJVTL010000000
VERSION     DAJVTL010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4466
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.225"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..651
                     /locus_tag="OQQ26_004219"
     CDS             <1..651
                     /locus_tag="OQQ26_004219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HCS1859454.1"
                     /translation="SDTDWLRLAMVKDLQPGEMTADAEDDSYLDDEDADWKTTTQGQK
                     SVGDTSATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTIAS
                     KDVMTRTVKISGVGRPYLAEEGTETVGVTGLTVAPASASVKVGATTTLTFTVKPDGAS
                     DKAISVHSTDPQTATVTLNGLVATVKGVKQGSVSIVGMTSDGDFVAVATVAVSAAG"
     gene            712..1098
                     /locus_tag="OQQ26_004220"
     CDS             712..1098
                     /locus_tag="OQQ26_004220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HCS1859455.1"
                     /translation="MFLKQGTFNYEKQSVVLSELSGLQRIEYLAFVQQRTAKFDAEEG
                     ELPEAERQIAFLRMGMDINAWLVSRSLWNADQSKDVETLCASVITTWSYDALGAGAEM
                     VLSLSGMGTIDNAGDDEHEALTPEKS"
     gene            1107..1436
                     /locus_tag="OQQ26_004221"
     CDS             1107..1436
                     /locus_tag="OQQ26_004221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
                     /protein_id="HCS1859456.1"
                     /translation="MQFVMRLAREFRRADWRRMLSEMSATELGEWGDYFRMQSFSDVW
                     MDAQFASLKALIVRMVSGSSDAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYG
                     PDSQPGH"
     gene            1408..>4466
                     /locus_tag="OQQ26_004222"
     CDS             1408..>4466
                     /locus_tag="OQQ26_004222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1859457.1"
                     /translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQ
                     RFMERQTQAARQTTQAASSAATAASVHAQTVEKNAQAHERMAREVEKTRQRMEALSQK
                     MREEQAQAMALAEAQDKAAAAFYRQIDSVKQASAGLQELQRIQQQIRQARNSGGIGQQ
                     DYLALISEVTAKTRVLTQAEEESTRQKVAFIRQLKEQATRQNLSSSELLRARAAQLGV
                     SSAAEVYIRKMEQAGKATHSLGLKSAAARQEIGVLIGELARGNLGALRGSGITLANRA
                     GWIDTLMSPKGMMLGGVIGGIAAAVYGLGKAWYDGQKEGEEFNRQLSLTGHYAGVTAG
                     QLWTLSRTISGNGITQHAAAGALAQVVGSGAFRGNDIGMVARAAAQMERSVGQSVSDT
                     INQFKRLKDDPVNAAKALDNELHFLTATQLEQIRVLGDQGRSSDAARIAMSALAEETG
                     RRTADIDNNLNALGSTLKYLSDLWNRFWDAAMNIGREDSLDEQIAALQEKVSRAKRLP
                     WTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALNRMNET
                     EAARHQREIARINAMQYADQAVRDAAIQRENERYEKALASGKKKTRETRNDEATRLLL
                     QYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLA
                     RKDELIQALTLLDVKQQELQKQTALNELKKKTIQLTSQLAEEERAQRQQHDLDIATVG
                     MGDQQRQRYQVQLSLRQKYQQQLEQLRRDSEQKGTYNTDDYRKAEQALTESLNRQLNE
                     NRRYWQQLEVVQGNWKNGVLRAFQDFTVDADNTAETAEQVFSSAFSNMGNGLATFVTT
                     GKLNFKSFTSSVLSDMAKILAQATMMKSIKGIGSVLGFDLSSLSLNANGGIYQSADLS
                     RYSGTVVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADIGGSGMAMFSPQ
                     YNIEINNDGTNGQIGPAALKAVYDLGKKAAADFMQQQARDGGRLSGA"
BASE COUNT         1122 a          998 c         1409 g          937 t
ORIGIN      
        1 tcggacactg actggctgcg tcttgcgatg gtgaaggatc tgcagcctgg cgaaatgacc
       61 gctgatgcag aagatgactc ttatctcgat gatgaagatg cagactggaa aacgacaacc
      121 caggggcaga aatccgtcgg tgatacttcg gcgacgctgg cctggcgtcc gggtgacagc
      181 gggcagaaaa aactggttca gttgttcgac tccggtgaag tctgcgcgtt tcgtatcaaa
      241 tatcccaacg gtactgttga tgttttccgt ggctggctga gttcactggg taaaaccatt
      301 gcctcaaaag acgtgatgac ccgcacagtg aaaatcagcg gtgtggggcg tccgtatctg
      361 gcagaagaag gcactgaaac cgtgggcgtt accgggctga cggtggcacc ggcatctgcc
      421 agtgtaaaag tgggagcaac caccacgctg acctttacag taaaacctga cggagccagt
      481 gacaaagcga tcagtgtgca ttcgacagat ccacagactg ccacggtgac cctgaacggg
      541 cttgtggcca cggtgaaagg cgtgaagcag ggcagtgtca gcattgtggg catgacttct
      601 gacggcgatt ttgtggcagt ggctacggtg gctgtcagcg ccgcaggtta acaggacgat
      661 actcatcatt tgccccgatt atccggggct tttttgcagg tggagaacat gatgtttctg
      721 aaacagggca cgtttaatta tgaaaagcag tccgtggtgc tcagtgagct gtccgggctg
      781 cagagaattg aatatctggc gtttgttcag cagcgaacgg caaagtttga tgccgaagag
      841 ggagaactgc cggaggctga acgacagatt gcttttctgc ggatggggat ggatatcaat
      901 gcctggctgg tttcccgctc actgtggaat gcggatcagt ctaaggatgt agagacgctt
      961 tgcgcatccg ttattacaac atggtcgtat gatgccctgg gtgcgggggc ggagatggtt
     1021 ctgtcgctga gcggtatggg gaccattgat aatgccgggg atgatgagca tgaggcgctg
     1081 acgccggaaa agtcctgacg cgggaaatgc agtttgtcat gcggcttgcc cgggagttcc
     1141 ggcgggcaga ctggcggcgg atgctgtcgg aaatgtcggc cactgagctt ggtgagtggg
     1201 gcgattattt ccggatgcag agcttcagtg atgtgtggat ggatgcgcag tttgcctcgc
     1261 tgaaggcatt gatcgtgaga atggtgtccg gcagtagtga tgctgcggtg gctgatttca
     1321 gccttttacc ggaagagaac gggataccgg agcgaacgga cgaagaactg atgcatcttg
     1381 gggaaggtat ttccggaggt gtgcgttatg gaccagatag ccaacctggt cattgatttg
     1441 gggattgatg cggcagagtt taaaaatgaa atcccccgta tcaaaaacct tctgaatggt
     1501 gcagccagcg atgcagaacg atcttctgcc cgtatgcagc gttttatgga gcgtcagact
     1561 caggccgccc ggcagacaac gcaggcggct tcttcggctg caacagccgc atccgtccat
     1621 gcgcagacgg tggagaagaa cgcacaggct catgaacgca tggcccgcga ggtggagaaa
     1681 acccgccagc gcatggaggc gctgagccag aaaatgcgcg aggaacaggc gcaggccatg
     1741 gctctggcgg aggctcagga taaagcagct gctgcgtttt atcgtcagat tgacagtgtg
     1801 aaacaggcca gtgcggggct gcaggaatta cagcgtattc agcagcagat ccgacaggcc
     1861 agaaacagtg gcgggattgg tcagcaggat tatctggcgc tgatttctga ggttacggcg
     1921 aaaacccgtg ttcttacgca ggctgaggaa gagtctaccc gacagaaagt ggcgtttatc
     1981 cgtcagctta aagagcaggc aacccgccag aatctttctt cttctgagtt gcttcgtgcc
     2041 agggctgccc agctgggggt aagcagtgct gcagaagtgt atatccgcaa aatggagcag
     2101 gcaggaaaag ccacgcattc gctgggtctg aaaagtgcag cagcccgcca ggagataggc
     2161 gttctgatag gtgaactggc ccgtggcaat ttaggagcgc tgaggggatc cgggataacg
     2221 ctggctaacc gtgccggatg gatagacaca ctgatgtcac cgaaaggcat gatgctgggc
     2281 ggggttattg gcggtattgc cgcggccgtc tatggtctgg gtaaagcctg gtatgacggt
     2341 cagaaggagg gggaagaatt taaccgccag ctgtcactga cggggcatta tgccggagtc
     2401 actgccgggc agctgtggac gctcagtcgt actatttccg ggaatggtat cacgcaacat
     2461 gctgcagccg gtgcgctggc tcaggtggtg gggagtggtg catttcgtgg aaacgatatc
     2521 ggtatggtgg cgagagctgc cgcacagatg gagcgatcgg ttggccagtc ggtcagcgat
     2581 accataaatc agtttaagcg gctgaaggat gatcctgtaa atgccgcgaa ggctctggac
     2641 aatgagctgc attttcttac tgccactcag cttgagcaga tacgcgtcct tggggatcag
     2701 gggcggtcca gtgatgctgc acggatagcc atgtctgcac tggcagagga aaccggtcgg
     2761 cgtactgcgg atattgataa taacctcaat gcgctgggca gtacgctgaa gtatctgtct
     2821 gatttatgga atcgtttctg ggatgcggcc atgaatattg gtcgtgaaga ctcgctggat
     2881 gaacagattg ctgctttaca ggagaaagtg tcgcgggcga aaagactccc ctggacggca
     2941 tcatcttctc aggttgaata cgatcagcag cgtcttaacg atcttcagga gaaaaaacgc
     3001 cagaaggatt tgcaggatgc aaaagagcag gcagagcgga attatcagga gcaacagaaa
     3061 cgccgtaatg ctgaaaatgc tgcactgaac cggatgaatg aaacggaagc tgcacgacat
     3121 cagcgtgaaa ttgcgcgtat taatgccatg cagtacgccg atcaggctgt cagggatgcg
     3181 gcgatacaac gtgaaaatga acgttacgag aaagccctgg catccggtaa gaaaaaaaca
     3241 cgcgaaaccc gtaatgatga ggccacccgg ttattgctgc agtacagtca gcaacaggca
     3301 caggtggaag gacagattgc tgctgccaga cagtcagcag gcattgccac ggaaaggatg
     3361 acagaagcgc ataaacagct tctggctctg cagcagcgca tcagcgacct ggacgggaaa
     3421 aaactgacgg cagatgaaaa gagtgtgctg gcccgtaaag atgaactgat tcaggcactg
     3481 acgctgctgg atgtaaaaca gcaggagctt cagaaacaga cggcactcaa cgagctgaag
     3541 aaaaaaacaa ttcagctgac cagtcaactg gctgaagaag agcgcgctca gcgtcagcaa
     3601 catgacctgg atatcgccac ggtgggtatg ggtgatcagc agcgacagcg atatcaggta
     3661 caactgagtc ttcgccagaa ataccagcaa cagctggagc agttgaggcg ggatagtgag
     3721 cagaaaggga catataacac ggatgactac agaaaggccg agcaggcgct gacggagagc
     3781 ctgaaccgac aactgaatga gaatcgccgt tactggcaac agcttgaagt tgtgcagggt
     3841 aactggaaaa acggagtcct gcgtgcattt caggatttta ccgtggatgc agataatacg
     3901 gcagaaacag cagaacaggt gttctcgtca gccttcagca acatgggaaa tggcctggca
     3961 acttttgtca ctaccggcaa actcaatttc aaatccttca cctcttctgt gctgtcagat
     4021 atggcgaaaa tcctggcgca ggcaaccatg atgaaatcga taaaagggat tggcagtgta
     4081 ctgggatttg atctcagcag cctttccctg aatgccaatg gggggattta tcagtctgct
     4141 gatttgagtc gttacagtgg cacggtggtt aaccgtccga cgttttttgc ttttgcaaaa
     4201 ggcgcgggtg tgatggggga agcgggacct gaagccattc tgccattgcg tcgtggtgct
     4261 gacggtaagc tgggggttgt ggcggatatt gggggttcag gtatggcgat gttttccccg
     4321 cagtacaaca tcgagatcaa taacgatggc acgaacgggc agataggtcc ggctgccctg
     4381 aaggcggttt atgacctcgg gaaaaaagcg gcagcggact ttatgcaaca gcaggcccgt
     4441 gatggtggtc ggttaagtgg agcata
//
LOCUS       DAJVTL010000224         4449 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.226, whole genome shotgun sequence.
ACCESSION   DAJVTL010000224 DAJVTL010000000
VERSION     DAJVTL010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4449
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.226"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..179)
                     /gene="merD"
                     /locus_tag="OQQ26_004223"
     CDS             complement(<1..179)
                     /gene="merD"
                     /locus_tag="OQQ26_004223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001277466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric resistance transcriptional repressor
                     protein MerD"
                     /protein_id="HCS1859458.1"
                     /translation="MSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDD
                     AALQRLCFVRAAFEAG"
     gene            complement(197..1891)
                     /locus_tag="OQQ26_004224"
     CDS             complement(197..1891)
                     /locus_tag="OQQ26_004224"
                     /EC_number="1.16.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury(II) reductase"
                     /protein_id="HCS1859459.1"
                     /translation="MSTLKITGMTCDSCAVHVKDALEKVPGVQSADVSYAKGSAKLAI
                     EVGTSPDALTAAVAGLGYRATLADAPSVSTPGGLLDKMRDLLGRNDKTGSSGALHIAV
                     IGSGGAAMAAALKAVEQGARVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESP
                     FDGGIAATTPTIQRTALLAQQQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNL
                     IVQLNDGGERVVAFDRCLIATGASPAVPPIPGLKDTPYWTSTEALVSETIPKRLAVIG
                     SSVVALELAQAFARLGAKVTILARSTLFFREDPAIGEAVTAAFRMEGIEVREHTQASQ
                     VAYINGEGDGEFVLTTAHGELRADKLLVATGRAPNTRKLALDATGVTLTPQGAIVIDP
                     GMRTSVEHIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALNLTAMPAVVFTDPQV
                     ATVGYSEAEAHHDGIKTDSRTLTLDNVPRALANFDTRGFIKLVVEEGSGRLIGVQAVA
                     PEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCCAG"
     gene            complement(1943..2365)
                     /gene="merC"
                     /locus_tag="OQQ26_004225"
     CDS             complement(1943..2365)
                     /gene="merC"
                     /locus_tag="OQQ26_004225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organomercurial transporter MerC"
                     /protein_id="HCS1859460.1"
                     /translation="MGLMTRIADKTGALGSVVSAMGCAACFPALASFGAAIGLGFLSQ
                     YEGLFISRLLPLFAALAFLANALGWFSHRQWLRSLLGMIGPAIVFAATVWLLGNWWTA
                     NLMYVGLALMIGVSIWDFVSPAHRRCGPDGCELPAKRL"
     gene            complement(2401..2676)
                     /gene="merP"
                     /locus_tag="OQQ26_004226"
     CDS             complement(2401..2676)
                     /gene="merP"
                     /locus_tag="OQQ26_004226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercury resistance system periplasmic binding
                     protein MerP"
                     /protein_id="HCS1859461.1"
                     /translation="MKKLFASLALAAAVAPVWAATQTVTLAVPGMTCAACPITVKKAL
                     SKVEGVSKVDVGFEKREAVVTFDDTKASVQKLTKATADAGYPSSVKQ"
     gene            complement(2690..3040)
                     /locus_tag="OQQ26_004227"
     CDS             complement(2690..3040)
                     /locus_tag="OQQ26_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mercuric transport protein MerT"
                     /protein_id="HCS1859462.1"
                     /translation="MSEPQNGRGALFAGGLAAILASTCCLGPLVLVALGFSGAWIGNL
                     TVLEPYRPLFIGAALVALFFAWKRIYRPVQACKPGEVCAIPQVRATYKLIFWIVAVLV
                     LVALGFPYVVPFFY"
     gene            3112..3546
                     /gene="merR"
                     /locus_tag="OQQ26_004228"
     CDS             3112..3546
                     /gene="merR"
                     /locus_tag="OQQ26_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hg(II)-responsive transcriptional regulator"
                     /protein_id="HCS1859463.1"
                     /translation="MENNLENLTIGVFAKAAGVNVETIRFYQRKGLLREPDKPYGSIR
                     RYGEADVVRVKFVKSAQRLGFSLDEIAELLRLDDGTHCEEASSLAEHKLKDVREKMAD
                     LARMETVLSELVCACHARKGNVSCPLIASLQGEAGLARSAMP"
BASE COUNT          818 a         1386 c         1424 g          821 t
ORIGIN      
        1 cccgcctcga aggccgcgcg cacgaagcac agccgttgca aggccgcatc gtcgaacacg
       61 ccgtagccgc ccgtggtgca ggccaccggc cgtaacaagc cgcgcaccag gtagtcgcgc
      121 acgatatgta cgctcacccc agcgttatgg gccagttgcg ataccgtgta ggcgctcatc
      181 gcacacctcc ttgtcctcac ccggcgcagc aggaaagctg cttcacatcc ttgttgaagg
      241 tctgcgccgc gagcttcaac ccttcgacca tcgtcaggta ggggaacaac tggtcggcca
      301 gttcctgcac cgtcatccgg ttgcgaatcg ccagtgcggc cgtctggatc agttcgcccg
      361 cttccggggc cactgcctgc acgccgatca gtcgtccgct gccttcttca accaccagtt
      421 tgatgaagcc gcgcgtgtcg aagttggcga gcgcgcgcgg cacgttgtcc agcgttagcg
      481 tgcgactatc agttttgatg ccgtcatggt gcgcttccgc ctcgctgtag cctacggtcg
      541 ccacttgcgg gtcggtgaac accacggccg gcatcgcggt caggttcagg gccgcgtcac
      601 cgccggtcat gttgatcgcg gcgcgagtgc cggccgctgc cgccacatag acgaactgcg
      661 gctggtcggt gcagtcgcct gcggcgtaga tgtgttccac gcttgtacgc atgccggggt
      721 cgatgacgat agcgccttgc ggggtgagcg tgacgcccgt cgcatccagt gccagcttgc
      781 gtgtgttggg cgcgcggccg gtggcgacca gcagcttgtc ggcgcgcagt tcgccgtgcg
      841 ccgtggtgag cacgaattcg ccgtcccctt caccattgat atacgcgacc tggctggcct
      901 gggtgtgttc cctcacctcg atgccctcca tgcggaatgc ggccgtgacg gcttcgccta
      961 tagctgggtc ttcgcggaag aacagcgtgc tgcgagccag gatcgtcacc ttcgctccga
     1021 gtcgggcgaa cgcctgcgcc agctccagcg ccaccactga tgagccaatc acggccaggc
     1081 gcttaggaat cgtctcgctg accagcgctt cagtggaagt ccagtacgga gtgtctttca
     1141 ggccgggaat cggcggcacg gccgggctcg cgccggtggc gatcaggcag cggtcgaatg
     1201 ccaccacgcg ctcgccgccg tcgttgagtt gcacgatcag gttgcgattg tccttaaagc
     1261 gggcggagcc gtgcagcaca gtgatcgccg gattgccctc caagatgcct tcgtacttgg
     1321 cgtggcgcag ttcatcgacg cgggcctgct gctgggccag cagcgccgtg cgctggatgg
     1381 tcggcgtggt agcggcgatg ccgccatcga acgggctttc ccggcgcaga tgggcgatat
     1441 gggcggcgcg gatcatgatc ttggacggca cacaaccgac attgacgcag gtgccgccga
     1501 tggtgccgcg ctcgatcagc gtgacacgtg cgccttgctc gacggccttc agcgccgctg
     1561 ccatcgcggc cccgccgctg ccgatgacgg cgatatgcaa tgcgccgctg ctacccgtct
     1621 tgtcgtttct gcccagcaga tcgcgcatct tgtcgagcaa tccgcccggc gtcgaaactg
     1681 agggggcatc ggccagcgtg gcccgataac cgagtccagc tacagcggcc gtcagcgcgt
     1741 cgggtgacgt gccgacctca atggcgagct tggcgctgcc cttggcgtag gagacatccg
     1801 ctgattgcac gccgggcact ttctccaggg cgtccttgac atgcactgcg cacgagtcgc
     1861 aagtcatgcc ggtgattttg agagtgctca taccatcgtt ccttattcgt gtgggccgcc
     1921 gtgtcgcacg gtcagccgtc tttcacaagc gcttggcggg gagttcgcag ccgtccggtc
     1981 cgcaacggcg atgcgccggc gacacgaagt cccagatcga caccccaatc atcaaggcca
     2041 ggccgacgta catcaggttc gccgtccacc agttgccgag cagccagacc gtggccgcaa
     2101 acacgatggc cgggccgatc atgccgagca gactgcgcag ccattgccga tgactgaacc
     2161 aacccagcgc gttcgccagg aaggccagcg cggcaaacag cggcagcagg cggctgatga
     2221 acagtccctc gtactggctc aagaagccca gcccgatggc cgcgccgaag ctggcgaggg
     2281 ctggaaagca ggcggcgcag cccatcgcgg aaacgacgct gccgagcgcg ccggttttat
     2341 cggcaatgcg tgtcatcagt cccatgaagc ggctctcgct gttgtcgttg gcttgctggc
     2401 tcactgcttg acgctggacg gatagccggc gtctgcggtg gccttggtca gcttctgtac
     2461 gctggccttg gtgtcgtcaa aagtgacgac ggcctcgcgc ttctcgaagc ccacatcgac
     2521 cttgctcacg ccttcgacct tggagagcgc tttcttgact gtgatcgggc aggcggcgca
     2581 agtcatgccg ggaaccgcta gcgtgacggt ctgggtagcg gcccacaccg gggcaacagc
     2641 ggcggcgagg gcaagggagg caaacagttt cttcatgatg aactcctggt taatagaaaa
     2701 atggaacgac atagggaaat ccaagcgcga ccaggaccag cacggccacg atccagaaaa
     2761 tcagcttgta ggtggcgcgc acctgcggaa tcgcgcagac ctcacctggc ttgcatgcct
     2821 gcacgggccg gtaaatccgc ttccaggcga agaacagcgc cactagcgcc gcgccgatga
     2881 acaacggtcg atagggttcc agcaccgtca ggttgccgat ccaagcaccg gagaagccca
     2941 gggcgaccag tactagcggc cccaggcagc aggtcgatgc aagaatggcg gccagcccgc
     3001 cggcgaagag cgcaccgcgc ccgttttgtg gttcagacat acgttggccc ttttgaattt
     3061 ggattggata gcgtaacctt acttccgtac tcatgtacgg agtcaagcga tatggaaaat
     3121 aatttggaaa acctgaccat tggcgttttt gccaaggcgg ccggggtcaa cgtggagaca
     3181 atccgcttct atcagcgcaa gggcctgttg cgggaaccgg acaagcctta cggcagcatc
     3241 cgccgctatg gggaggcgga cgtggttcgg gtgaaattcg tgaaatcggc acagcggctg
     3301 gggttcagtc tggacgagat tgccgagctg ttgcggctcg acgatggcac ccactgcgag
     3361 gaggccagca gcctggccga acacaagctc aaggacgtgc gcgagaagat ggccgacttg
     3421 gcgcgcatgg aaaccgtgct gtctgaactc gtgtgcgcct gccatgcacg aaaggggaat
     3481 gtttcctgcc cgttgatcgc gtcactacag ggcgaagcag gcctggcaag gtcagctatg
     3541 ccttagcgtg ctttattttc cgttttctga ggtgccccct aattgagcat ttccaggcgc
     3601 ttgcgcctgg tcaacgaaag agtcagcgcc gtaggcgctg ccatttttgg ggtgaggccg
     3661 ttcgcggccg aggggcgcag cccctggggg gatgggaggc ccgcgttagc gggccgggag
     3721 ggttcgagaa gggggggcac cccccttcgg cgtgcgcggt cacgcgcaca gggcgcagcc
     3781 ctggttaaaa acaaggttta taaatattgg tttaaaagca ggttaaaaga caggttagcg
     3841 gtggccgaaa aacgggcgga aacccttgca aatgctggat tttctgcctg tggacagccc
     3901 ctcaaatgtc aataggtgcg cccctcatct gtcagcactc tgcccctcaa gtgtcaagga
     3961 tcgcgcccct catctgtcag tagtcgcgcc cctcaagtgt caataccgca gggcacttat
     4021 ccccaggctt gtccacatca tctgtgggaa actcgcgtaa aatcaggcgt tttcgccgat
     4081 ttgcgaggct ggccagctcc acgtcgccgg ccgaaatcga gcctgcccct catctgtcaa
     4141 cgccgcgccg ggtgagtcgg cccctcaagt gtcaacgtcc gcccctcatc tgtcagtgag
     4201 ggccaagttt tccgcgaggt atccacaacg ccggcggccg cggtgtctcg cacacggctt
     4261 cgacggcgtt tctggcgcgt ttgcagggcc atagacggcc gccagcccag cggcgagggc
     4321 aaccagcccg gtgagcgtcg gaaaggcgct ggaagccccg tagcgacgcg gagaggggcg
     4381 agacaagcca agggcgcagg ctcgatgcgc agcacgacat agccggttct cgcaaggacg
     4441 agaatttcc
//
LOCUS       DAJVTL010000225         4431 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.227, whole genome shotgun sequence.
ACCESSION   DAJVTL010000225 DAJVTL010000000
VERSION     DAJVTL010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4431
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.227"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            23..1738
                     /gene="dld"
                     /locus_tag="OQQ26_004229"
     CDS             23..1738
                     /gene="dld"
                     /locus_tag="OQQ26_004229"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HCS1859464.1"
                     /translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTL
                     RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
                     DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
                     QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
                     DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
                     EVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
                     ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
                     WQEVE"
     gene            complement(1777..2709)
                     /gene="pbpG"
                     /locus_tag="OQQ26_004230"
     CDS             complement(1777..2709)
                     /gene="pbpG"
                     /locus_tag="OQQ26_004230"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HCS1859465.1"
                     /translation="MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAM
                     IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
                     SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
                     FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH
                     LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
                     IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
     gene            complement(2883..3470)
                     /locus_tag="OQQ26_004231"
     CDS             complement(2883..3470)
                     /locus_tag="OQQ26_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014170891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HCS1859466.1"
                     /translation="MSHVWGLFSHPDREMQVINRENETINHHYTHHVLLMAAIPVICA
                     FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
                     LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
                     EGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF"
     gene            3640..4218
                     /locus_tag="OQQ26_004232"
     CDS             3640..4218
                     /locus_tag="OQQ26_004232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416640.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HCS1859467.1"
                     /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV
                     VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM
                     YGFRVIGPTLIGASHLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
                     KHWVWLILVVVLVVGVRWWLKRRGKKKPDNQA"
     gene            complement(4348..>4431)
                     /locus_tag="OQQ26_004233"
     CDS             complement(4348..>4431)
                     /locus_tag="OQQ26_004233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HCS1859468.1"
                     /translation="EGTNYTTGQSLIVDGGFMLANPQFNPE"
BASE COUNT         1082 a         1129 c         1169 g         1051 t
ORIGIN      
        1 tcgccaccac aaggagtgga aaatgtcttc catgacaaca actgataata aagccttttt
       61 gaatgaactt gcccgtctgg tcggtcattc acacctgctc accgatcccg caaaaacggc
      121 ccgctatcgc aagggcttcc gttctggtca gggcgacgcg ctggctgtcg ttttccctgg
      181 ctcactactg gaattgtggc gggtgctgaa agcctgtgtc accgccgaca aaattattct
      241 gatgcaggct gccaatacag gcctgaccga aggatcgacg ccaaacggta acgactatga
      301 tcgcgatatc gtgatcatca gcaccctgcg tctcgacaag ctgcacgttc ttggcaaggg
      361 cgaacaggtg ctggcctatc cgggcaccac gctctattcg ctggaaaaag ccctcaaacc
      421 gctgggacgc gaaccgcact cagtgattgg atcatcgtgt ataggcgcat cggtcatcgg
      481 cggtatttgt aacaactccg gcggctcgct ggtgcaacgt ggcccggcgt ataccgaaat
      541 gtcgttattc gcgcgtataa atgaagacgg caaactgacg ctggtgaacc atctggggat
      601 tgatctgggc gaaacgccgg agcagatcct tagcaagctg gatgatgatc gcatcaaaga
      661 tgacgatgtg cgtcacgatg gtcgtcacgc ccacgattat gactatgtcc accgcgttcg
      721 tgatattgaa gccgacacgc ccgcacgtta taacgccgat cctgatcggt tatttgaatc
      781 ttctggttgc gccgggaagc tggcggtctt tgcagtacgt ctagatacct tcgaagcgga
      841 aaaaaatcag caggtgtttt atatcggcac caaccagccg gaagtgctga ccgaaatccg
      901 ccgtcatatt ctggctaact tcgaaaatct gccggttgcc ggggaatata tgcaccggga
      961 tatctacgat attgcggaaa aatacggcaa agacaccttc ctgatgattg ataagttagg
     1021 caccgacaag atgccgttct tctttaatct caagggacgc accgatgcga tgctggagaa
     1081 agtgaaattc ttccgtccgc attttactga ccgtgcgatg caaaaattcg gtcacctgtt
     1141 ccccagccat ttaccgccgc gcatgaaaaa ctggcgcgat aaatacgagc atcatctgct
     1201 gttaaaaatg gcgggcgatg gcgtgggcga agccaaatcg tggctggtgg attatttcaa
     1261 acaggccgaa ggcgatttct ttgtctgtac gccggaggaa ggcagcaaag cgtttttaca
     1321 ccgtttcgcc gctgcgggcg cagcaattcg ttatcaggcg gtgcattccg atgaagtcga
     1381 agacattctg gcgttggata tcgctctgcg gcgtaacgac accgagtggt atgagcattt
     1441 accgccggag atcgacagcc aactggtgca caagctctat tacggccatt ttatgtgcta
     1501 tgtcttccat caggattaca tagtgaaaaa aggcgtggat gtgcatgcgt tgaaagaaca
     1561 gatgctggaa ctgctacagc agcgtggcgc gcaataccct gccgagcata acgtcggtca
     1621 tttgtataaa gcaccggaga cgttgcagaa gttttatcgc gagaacgatc cgaccaacag
     1681 tatgaatccg gggatcggta aaaccagtaa gcggaaaaac tggcaggaag tggagtaaaa
     1741 attacggatg gcatagtatc gccatccgtc attcacttaa tcgttctgtg ccgtctgccc
     1801 cgccgccgcc atttgggcgg ctttttgttt tttatagctc aacgctgctg ctggaacagg
     1861 catcacctta ccggtttcaa tccaggtacg caggcggctg gcatcggcaa aatgggtata
     1921 tttgccaaac gcatccatca ctaccagcgc caccggttta ttattgataa ccgtacgcat
     1981 caccagacaa tggcccgccg cattggtaaa accggttttg gttaactgaa tattccagtt
     2041 atcgcgatac accagatggt tagtattgcg gaacggcagc gtatacgtcg ggttagagaa
     2101 ggttgccata tcttcccggg tagtacttaa ctgcccgatc aacggatatt gtttgctggc
     2161 aatgagcagt ttggttaagt cacgggcagt tgaaacgtta tgcaccgata gtccggtcgg
     2221 ttcaacaaag cgcgtgttgt tcattccgag cgatttcgct ttcgcattca tcgccttaat
     2281 aaaggctttg taaccaccgg gataatggtg cgcaaggctt gccgccgcgc ggttttctga
     2341 agacatcagc gccagcaaca gcatatcttt acggctgatt tcgctgttta gtcgtacgcg
     2401 cgaatagacc cctttcatct ccggcgtctg gctgatatcc acttttagtt tttcatccag
     2461 cggcagtcgt gcatccagca caaccatcgc ggtcattaat ttgctgatag acgcaatcgg
     2521 acgcaccaga tccgggtggt tcgagtagat cactttgttg gtattcagat caacaatcat
     2581 cgcgctaccg gaggcaattt caggttgtga agcggtggta gcggctgccg ttttcgcaac
     2641 ggcctgcggt gccaaaggca cagccagcat cagggccagg ctaaataaag aaactcgaaa
     2701 tttcggcatg atgagcattc agatagtggt tcacgcgcac gggttgcgca ccgccggagt
     2761 aaggatttac tgaggctagc gacgccatca taacgagcaa aaagtgcgat cgtcaaagga
     2821 gaatcgtgag gaaatgctgc attgctgaca tttacgccag caatgcaacg tcaaagaact
     2881 ttctagaaca aacgataacc gtagccccat agtataacgg ttagggcgag cagcacttcc
     2941 agtaccagca cgccaatcgc cagcgtcgaa ctggagaagc taaggccttc ctctttgttg
     3001 atattcagga agctcggaat accaaggtaa agcaggtagc cggtgtaaaa cagcgccacc
     3061 gtgccgacca gcgcacacaa ccagaccagt ggataaagcg ccaccagacc acttaaaaac
     3121 agcggagttg caacgtagcc cgcgaagacc atgcagtgcg caagtgacgg acgctgcggg
     3181 taattgcgcg ccatccacca gatgacccgc cccatcaccg cgaccccagc gagcataacg
     3241 ccataaaaca ggacagccaa cgccagtccg gtaaaccagg ataacttcag gatagtgcca
     3301 tcgccaaaat tccagccaat ctgtgtagtg ccaatgaagg cgcaaatcac cggaatcgcc
     3361 gccatcagca aaacgtggtg ggtgtaatgg tgattaatcg tttcgttttc gcgattaatc
     3421 acctgcattt cacgatcggg atgggaaaac agtccccaga catggctcat accgccccct
     3481 tgttgtgagt tcatgaacct gacagttcaa gtataagtca gcttgtgatt attttttgtt
     3541 cgctcatgta atttgcaccg tctgatgtac gtcctttttc agcgtgaatg atttccaggg
     3601 tgtatgctta caggcaacca aagggagaca gactggccta tggatctcaa tacactcatc
     3661 tcacaatatg gttatgccgc gctggtgatc ggtagcctgg cggaaggtga aaccgtgact
     3721 ttgctgggag gcgttgcggc acatcagggg ctattaaagt tcccgctggt ggtactttct
     3781 gtggcgcttg gcggcatgat tggcgaccag gtgctctatc tgtgcgggcg gcggtttggc
     3841 ggcaagctgt tacgccgttt ctcgaaacat caggataaaa ttgagcgggc gcagaaactt
     3901 atccagcgcc atccgtatct gtttgtcatt ggtacgcgtt ttatgtatgg ctttcgggtc
     3961 attggtccga cgctgattgg tgccagccat ctgccgccga aaatctttct gccgcttaat
     4021 attctcggcg catttgcctg ggcgttgatt tttaccacta tcggttacgc tggtggtcag
     4081 gtgattgcgc cgtggttgca caatctcgac cagcatttga agcactgggt ctggttgatt
     4141 ctggtcgtgg ttctggtggt aggcgtgcgc tggtggctga aacgacgcgg gaagaaaaag
     4201 ccggataatc aggcgtaaaa ccattgccct ggataaggcg ttcgcgccgc atccgacatc
     4261 cggagtacca tgcctgatgc gacgcttgtg cgtcttttca tgccgaccaa aatattaccc
     4321 aatgaaatat ccacgcacct cactgcgcta ttctgggttg aactgtggat tcgccaacat
     4381 aaagccgcca tccactatca acgactgccc ggtggtgtaa tttgtgccct c
//
LOCUS       DAJVTL010000226         4382 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.228, whole genome shotgun sequence.
ACCESSION   DAJVTL010000226 DAJVTL010000000
VERSION     DAJVTL010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4382
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.228"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(7..843)
                     /locus_tag="OQQ26_004234"
     CDS             complement(7..843)
                     /locus_tag="OQQ26_004234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HCS1859469.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(843..1646)
                     /locus_tag="OQQ26_004235"
                     /note="aph(3'')-Ib"
     CDS             complement(843..1646)
                     /locus_tag="OQQ26_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HCS1859470.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            complement(1707..2522)
                     /gene="sul2"
                     /locus_tag="OQQ26_004236"
     CDS             complement(1707..2522)
                     /gene="sul2"
                     /locus_tag="OQQ26_004236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HCS1859471.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIERIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            complement(2710..3681)
                     /locus_tag="OQQ26_004237"
     CDS             complement(2710..3681)
                     /locus_tag="OQQ26_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein C"
                     /protein_id="HCS1859472.1"
                     /translation="MVKPKNKHSLSHVRHDPAHCLAPGLFRALKRGERKRSKLDVTYD
                     YGDGKRIEFSGPEPLGADDLRILQGLVAMAGPNGLVLGPEPKTEGGRQLRLFLEPKWE
                     AVTADAMVVKGSYRALAKEIGAEVDSGGALKHIQDCIERLWKVSIIAQNGRKRQGFRL
                     LSEYASDEADGRLYVALNPLIAQAVMGGGQHVRISMDEVRALDSETARLLHQRLCGWI
                     DPGKTGKASIDTLCGYVWPSEASGSTMRKRRQRVREALPELVALGWTVTEFAAGKYDI
                     TRPKAAGCPPPLYCKQDIFIFYIQWLIFLLIGNTMKNTMLRKGLTIF"
     gene            complement(3668..>4382)
                     /locus_tag="OQQ26_004238"
     CDS             complement(3668..>4382)
                     /locus_tag="OQQ26_004238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001517559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HCS1859473.1"
                     /translation="KSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHR
                     LHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRR
                     FHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHASKGAAMMGAGDQQQASRGSSVL
                     VDNIRWQSYLSSMTSAEAEEWGVDDDQRRFFVRFGVSKANYGAPFADRWFRRHDGGVL
                     KPAVLERQRKSKGVPRGEA"
BASE COUNT          914 a         1339 c         1277 g          852 t
ORIGIN      
        1 tgatatctag tatgacgtct gtcgcacctg cttgatcgcg gccgcgatag ctagatcgcg
       61 ttgctcctct tctccatccg cgttccaagc tgcggaaagg cacccataag cgtacgcctg
      121 gtcgagcagg cgacgcggat cgacgtccag cgcacgagag aatgcgtccg ccatctgtgc
      181 aatgcgtcta ggatcgagac aaaggtcgtc tctgtcagcc ggatcgtaga acatattggc
      241 ggcgccaaag cccacttcac cgaccagacc gacgggatct atcaccagcc agccgcgact
      301 ggagaacatg atgttttcat gatgcagatc gccatgtagc ccacgcagtt ccgaggcatt
      361 gctcatcatt tgatcggcta taatcgccgc gtggacgtag tcagtttgac aacctgcgtt
      421 ttgatcatcg cgcgcccgct gaaacaaagc tgcaaagcga tcccggatcg ggagaagggc
      481 agaaggcagg ggttcctcag atgcggcata cagcttcgcc attagttccg ctgcaatttc
      541 ggtcgcctgg tagtcgccgt gctcggcaac gatgtgagag agcattcgct ccccggcata
      601 ttcgagcaac atcagattgt tctcacgacc gagcaaccgg actgctcccc tcccattgcg
      661 ccataccaga tagtcggccc cgcgcagttc atcagcaatg tcttctatag gtttcaatcc
      721 cttgacgatt gcaggagtcc cgtctggcaa tgaaactttc caaacgaggc tggaaaaggt
      781 gtccgcaatg agaacaggtt gcgaaacgtg ccaatgagca ggaaaaacag gcggcatgaa
      841 catcaacccc aagtcagagg gtccaatcgc agatagaagg caaggcgttc gcggtcgggg
      901 gcttcgatcc ccaatacatt gaataggaca gcgaaggcgc gctctgcttc atctggcgct
      961 gcccagttct cttcggcgtt agcaatcatg agtgccaaat cggcatagcg atctgctgtt
     1021 ccgagccgcc caaggtcgat cagacccgtg cattgaagag ttttagggtc caccatgaag
     1081 ttcggcatgc agggatcacc atggcaaaca accatatcgg tgcgctcttg gtcgagccgc
     1141 accggtagct ctcgttcgac acgagccaaa agatcgagct gcggcgtact cttgtcctcg
     1201 tccggtaaga agtcgggatt gacggcattg cgggacacca catcaacggc gcgtccgaac
     1261 attcgcgaca gcctgcgctc aaacggacat tgatcaaccg ataggctgtg aacagcgcca
     1321 agttgctgcc ccattgacgg ccacgctttg agcaaatccg ctccagacag atcagccgcc
     1381 ggtactcccg gaattgccgt tatcaccaag catgcaccct cctgttcctc ctgccagttg
     1441 atgacctcgg ggcaagccac acctcgacct ttgagccaaa tgaggcggtc acgctctcca
     1501 gcgagctcac cgcggcggga agcaggtgcg attttcgcga aggcatgccc gtcaccacgt
     1561 cgaaaaacaa aatcaccaga ttctccgcct ctgacaggca accagtcaga atgcgattca
     1621 ccaaaaaaaa tattagttcg attcaatgga ggttccttca gttttctgat gaagcgcgaa
     1681 tatagagaaa tatcccgaat gtgcagttaa cgaattcttg cggtttcttt tagcgccgcc
     1741 aataccgcca gcccgtcgcg caaggggcgc ggctcgtgtg tgcggatgaa gtcagctcca
     1801 cctgcggcgg cggcaagctc tgcagcgagt gtcgcggccc cgacatcccc cggaccacgg
     1861 cctgtgagcg cgcgcagaaa ggatttgcgc gaaacagaca gaagcaccgg caaatcgaag
     1921 cgcagccgca attcatcgaa ccgcgccagc accgagagcg aggtttcggg agcagccccc
     1981 agaaaaaacc ccatgccggg atcaaggaca aggcggttgc gtttgatacc ggcacccgtc
     2041 agcgccgcga tgcgcgcgtc aaagaacgcc gcaatgtgat ccatgatgtc gccagcgggt
     2101 gcctcgcgcc gatctgcctg cccgtcttgc accgaatgca taacgacgag tttggcagat
     2161 gatttcgcca attgcggata gaacgcagcg tctggaaaac cgcgaatatc attgagatag
     2221 gccacaccac gcgacaaggc ataggcttgc gtcgcgggtt gataactgtc gagcgagacg
     2281 ggaatgccat ctgccttgag cgcgtccagc accggcgcga tacgctcgat ttctgtgtcg
     2341 gacgaaacag gcgcggcgtc ggggttgctg gatgccggac cgaggtcgat cacatctgcc
     2401 ccctcggcca tcagcttacg cgcctgcgca atggctgcgt ctggcgccag ataccggcct
     2461 ccatcggaga aactgtccga ggttatgttg acgatgccga aaatgatgag cgatttattc
     2521 atgggggctt ctataataat aataatcgag catgagtctc atacggatgc tcgggtcgaa
     2581 agggaatccc caggcgagta acctgtttgc ggtgatccat tagctgcagg agcagaatag
     2641 catacatctg gaagcaaagc caggaaagcg gcctatggag ctgtgcggca gcgctcagta
     2701 ggcaattttt caaaatattg ttaagccttt tctgagcatg gtatttttca tggtattacc
     2761 aattagcagg aaaataagcc attgaatata aaagataaaa atgtcttgtt tacaatagag
     2821 tggggggggg cagcctgccg ccttgggccg ggtgatgtcg tacttgcccg ccgcgaactc
     2881 ggttaccgtc cagcccagcg cgaccagctc cggcaacgcc tcgcgcaccc gctggcggcg
     2941 cttgcgcatg gtcgaaccac tggcctctga cggccagaca tagccgcaca aggtatctat
     3001 ggaagccttg ccggttttgc cggggtcgat ccagccacac agccgctggt gcagcaggcg
     3061 ggcggtttcg ctgtccagcg cccgcacctc gtccatgctg atgcgcacat gctggccgcc
     3121 acccatgacg gcctgcgcga tcaaggggtt cagggccacg tacaggcgcc cgtccgcctc
     3181 gtcgctggcg tactccgaca gcagccgaaa cccctgccgc ttgcggccat tctgggcgat
     3241 gatggatacc ttccaaaggc gctcgatgca gtcctgtatg tgcttgagcg ccccaccact
     3301 atcgacctct gccccgattt cctttgccag cgcccgatag ctacctttga ccaccatggc
     3361 atcagcggtg acggcctccc acttgggttc caggaacagc cggagctgcc gtccgccttc
     3421 ggtcttgggt tccgggccaa gcactaggcc attaggccca gccatggcca ccagcccttg
     3481 caggatgcgc agatcatcag cgcccagcgg ctccgggccg ctgaactcga tccgcttgcc
     3541 gtcgccgtag tcatacgtca cgtccagctt gctgcgcttg cgctcgcccc gcttgagggc
     3601 acggaacagg ccgggggcca gacagtgcgc cgggtcgtgc cggacgtggc tgaggctgtg
     3661 cttgttctta ggcttcacca cggggcaccc ccttgctctt gcgctgcctc tccagcacgg
     3721 cgggcttgag caccccgccg tcatgccgcc tgaaccaccg atcagcgaac ggtgcgccat
     3781 agttggcctt gctcacaccg aagcggacga agaaccggcg ctggtcgtcg tccacacccc
     3841 attcctcggc ctcggcgctg gtcatgctcg acaggtagga ctgccagcgg atgttatcga
     3901 ccagtaccga gctgccccgg ctggcctgct gctggtcgcc tgcgcccatc atggccgcgc
     3961 ccttgctggc atggtgcagg aacacgatag agcacccggt atcggcggcg atggcctcca
     4021 tgcgaccgat gacctgggcc atggggccgc tggcgttttc ttcctcgatg tggaaccggc
     4081 gcagcgtgtc cagcaccatc aggcggcggc cctcggcggc gcgcttgagg ccgtcgaacc
     4141 actccggggc catgatgttg ggcaggctgc cgatcagcgg ctggatcagc aggccgtcag
     4201 ccacggcttg ccgttcctcg gcgctgaggt gcgccccaag ggcgtgcagg cggtgatgaa
     4261 tggcggtggg cgggtcttcg gcgggcaggt agatcaccgg gccggtgggc agttcgccca
     4321 cctccagcag atccggcccg cctgcaatct gtgcggccag ttgcagggcc agcatggatt
     4381 ta
//
LOCUS       DAJVTL010000227         4365 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.229, whole genome shotgun sequence.
ACCESSION   DAJVTL010000227 DAJVTL010000000
VERSION     DAJVTL010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4365
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.229"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(58..147)
                     /locus_tag="OQQ26_004239"
                     /pseudo
     CDS             complement(58..147)
                     /locus_tag="OQQ26_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312806.2"
                     /note="in Escherichia coli the MobB protein is not
                     essential but has been found to interact with multiple
                     proteins involved in the molybdopterin guanine
                     dinucleotide cofactor biosynthesis pathway; incomplete;
                     partial in the middle of a contig; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
     gene            complement(448..645)
                     /locus_tag="OQQ26_004240"
                     /pseudo
     CDS             complement(448..645)
                     /locus_tag="OQQ26_004240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000599593.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
     gene            750..1826
                     /locus_tag="OQQ26_004241"
     CDS             750..1826
                     /locus_tag="OQQ26_004241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001146180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HCS1859474.1"
                     /translation="MPYEIPTLGKLIADGEKDIAYELGLQKLPPVSVEQALNVSFSSQ
                     VRDLYDHQSWIKDQIIPSTTSDDETIIKTAKYEGVIRKQATFASGRVTFTSQSPLPAE
                     TRMQSDTNQVYQVLTSGEVQDGEVTVIVQAEEAGVEGNLAAGAVLTLLSPLPGTASTG
                     AVAEGGITGGADTESIAALLDRLLYVRRNPPTGGALHDYVIWAREVPGVSRAWAWDAW
                     HGPGTVGLAWLYDDRENIVPTREDLKTMEQYLFCHKHPATGVMVGKPGGIEVWPVQVR
                     LKKVSISIRLTPDSLANRSAVRANLTALQKTLAPGQTLPVSSLRTAIGMTSGITDYFL
                     NIGEDTTSDVDELITIGEVTWLTA"
     gene            1811..2395
                     /locus_tag="OQQ26_004242"
     CDS             1811..2395
                     /locus_tag="OQQ26_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000951401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HCS1859475.1"
                     /translation="MAHSVTEWLAALQQVMPRGKAWPRDNDADLNRFLRALAERLNRT
                     EYDASRLHVEMRPETTLRLLPEWEQYLALPECGIAPTTREARRRAVVEKYRRRGGLAT
                     WQTEAAAAALGFTIKVTAVLPHHCLRDCMYPLHPARYRWMLKVNVPGKDAGRFTCIDG
                     VMTPLISERTRELECLLKHYRLAGTEYEYYYTGE"
     gene            2399..3496
                     /locus_tag="OQQ26_004243"
     CDS             2399..3496
                     /locus_tag="OQQ26_004243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000500225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859476.1"
                     /translation="MFYVDNPTGVPVMPPVAAELSKTTLYFTEGGNGIPPTYPGPDWF
                     NIIQSELLEILRQANIKPDKNTTDQIMTALKKLFITNSGSAGAIAGLTGQNNTFPYFT
                     GKDTMALTPLSAFVRGILGKNSASDFVKDIGAGRAFSGSVSIGGDSGAWTTAQFIDWL
                     DSQGAFNHSYWMCKGSWAYAGNKIITDTGCGNIQLAGAVVEVMGVKSAMTIRVTTPTT
                     ATNGTTSSQFTYINHGDAYSPGWRREYNTRNKPTASDVGALPANGNAVSATRLQTARR
                     INNVLFDGTRDITINTTEPGAVRNFQYTNEVFYNPGSTTITWRFRAPSGCQLSGIYVQ
                     DTGKNTADNIGGVYYKQAQIYINGAWRSVSG"
     gene            3511..4041
                     /locus_tag="OQQ26_004244"
     CDS             3511..4041
                     /locus_tag="OQQ26_004244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000423349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1859477.1"
                     /translation="MELRNVTRYYPEGMPYGEGIQYFRSEDGQDFYESLDKFTKKYKL
                     CTHPETGVIYSMAEDVSRLYPVGFTIVEVDELPEGFGIEACWYYKNGEVLPVPVDYLR
                     LAEKQRQSLLNEARDITSDWKTELELGTISDDDKARLTQWMAYIREVKTLDLSTVTDE
                     ASFNSINWPERPDAAA"
     gene            4028..>4365
                     /locus_tag="OQQ26_004245"
     CDS             4028..>4365
                     /locus_tag="OQQ26_004245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1859478.1"
                     /translation="MPQLKGVIKTPTGEPLGGATITLTSLHNRAGILKSVFSHVTTQS
                     GEYDFPVLPGVYSVRLTQSAQCLSEIGIIRVYEDSTDGSLNDFLGATDIDLRPESLKK
                     FEELAQQAQQ"
BASE COUNT         1108 a         1113 c         1164 g          980 t
ORIGIN      
        1 tggtgcagaa aaaggtcgga tgcgacgctg gctgcgtctg atccagccta ctcttgctta
       61 tccgtcctga ttttgcatcc actccaccac aaaatcagcc agccccccaa catcattaat
      121 atccagtaac gcgacatcaa gattaagtga ctatgactag gtaatttatt caagataacc
      181 gggaagagat taaaaaagac gggatttgat tggattcaat aacttagcta ctagttgtat
      241 tcaagataaa atgggcaagg gccgtttagt ttgttcagaa caataaaaca ttcaagataa
      301 agcgtcttgt ttattttgac cttttaaagg cttttaaaac tagcttatca gaagttgtag
      361 aaatggacca agtaagttaa gcacagctat gctaactgcc ttgttggtta gttggatgag
      421 atcggcctca gcttcatttc ccgccaaaat ctctctaacc ttttgttctg acaggttatt
      481 taggcttaaa gcagctaatc ttcgaatacc cgttaaacta atcaactctt ggttttcttg
      541 gctgcaaaat tcgagcaact tttcaacacc ttttcgtttg agcgtatgga tcacgatctc
      601 tttttcttgt tcgcttagag aatccattat tttcattaac tcattagctt ttgaggcctt
      661 gtttgatggt ttggttgctg tttgcataac ccgcccggac aaaaccacac tcagaatcga
      721 aatcacccgt cgatgggagg ccaccattaa tgccgtatga aatccccacg ctgggcaaac
      781 tgattgccga cggcgaaaaa gatattgcgt atgaactcgg cctgcaaaag ctgccgcctg
      841 tcagtgttga gcaggcgctg aacgtgtcat tcagcagtca ggtccgggat ttatacgacc
      901 atcagagctg gattaaggac cagataatcc cgtccaccac gtctgatgat gaaaccatta
      961 tcaaaacagc aaagtatgaa ggcgttatcc gcaagcaggc cacctttgcc agcgggcggg
     1021 tgaccttcac cagtcagtcc ccccttccgg cagaaacccg gatgcagtcc gacacgaacc
     1081 aggtgtatca ggtactcacg tccggcgagg tgcaggacgg cgaggtcacc gtcatcgtgc
     1141 aggctgaaga agccggtgtg gagggcaatc ttgctgccgg tgccgtactc accctgctgt
     1201 ccccgctgcc cggaacggcc agcacaggcg cggtggctga aggtggcatc accggtggcg
     1261 cagacactga atccatcgca gcgctgctgg accgtctgct gtatgtgcgc cgcaatccac
     1321 cgacaggcgg cgcgttgcat gactacgtga tatgggcgcg tgaagtgccg ggcgtcagcc
     1381 gcgcgtgggc gtgggatgca tggcacggcc ccggcacggt cgggctggca tggctttatg
     1441 atgaccggga aaacatcgtg ccaacccgcg aagacctgaa gacaatggag cagtatctgt
     1501 tctgccacaa acacccggcc acgggcgtga tggtgggtaa accgggcggc attgaggtct
     1561 ggccggtaca ggtcaggctg aagaaagtca gcatatccat ccgtctgaca ccggacagcc
     1621 tggcgaacag gagcgccgtc cgggcaaacc tgaccgcgtt acagaagaca ctggcacccg
     1681 gtcagacgct gccggtgtcc tcgctgcgca cggccatcgg tatgacgtcc ggcatcacgg
     1741 attacttcct taacatcggg gaggacacca ccagtgatgt ggatgagctt atcaccatcg
     1801 gggaggtgac atggctcaca gcgtgacgga atggctggcc gcactgcaac aggtcatgcc
     1861 acggggtaag gcatggccgc gtgataacga cgcggattta aaccgctttt taagggcgct
     1921 tgcagaacgt ttaaaccgca ctgaatacga cgcctcgcgt ctgcatgtgg agatgcgacc
     1981 ggaaaccacg ctccggctgc tgccggagtg ggagcagtat ctggcgctgc cggaatgcgg
     2041 aattgccccc accaccaggg aagcccgccg ccgtgccgtg gtggagaaat accgtcgcag
     2101 gggcgggctg gcaacctggc agactgaagc cgcagcagcg gcgctgggct tcaccattaa
     2161 ggtgacagcc gttctgccgc accactgtct gcgcgactgc atgtatccgc tgcatccggc
     2221 gcggtatcgc tggatgctga aagtgaacgt cccgggtaaa gatgccgggc ggtttacctg
     2281 tattgatggc gtcatgacac cattaatcag cgaacgcacc cgtgagctgg aatgcttgct
     2341 gaagcattac cggctggcgg gcacggaata tgaatattat tacaccggag aataatttat
     2401 gttttatgtg gataacccga cgggtgtgcc ggtaatgcca cctgtcgcgg ctgaattaag
     2461 caaaacaacg ctttatttca ccgaaggcgg gaacggtatt ccgcccacgt atccggggcc
     2521 ggactggttt aatattattc agtctgaatt actggaaata ctccggcagg caaatatcaa
     2581 accggataaa aacacaaccg accagattat gacagcgctg aaaaaactgt ttattacgaa
     2641 cagtggttca gccggagcta ttgccggatt aaccggtcag aataatacat tcccttattt
     2701 taccggcaaa gacacaatgg cattaacgcc gctcagtgct tttgttcgcg gtattctcgg
     2761 aaaaaacagc gccagcgatt ttgttaaaga catcggagca ggccgtgctt tcagtggttc
     2821 tgtaagtatt ggtggcgaca gtggagcctg gacgacggcg cagtttattg actggctgga
     2881 ttcacaggga gcatttaacc attcttactg gatgtgcaaa ggctcctggg cttatgcggg
     2941 caataaaatc atcaccgata ccggctgcgg caatattcag ttggccggtg cagttgttga
     3001 ggtaatgggc gtcaaatcag ccatgaccat cagggtgacc acaccaacaa cggccacgaa
     3061 cggcacgaca agctcacagt tcacctacat caaccacgga gacgcctact ctcccggatg
     3121 gcgacgtgag tacaatacca gaaacaaacc aacagcatcg gacgtggggg cactccccgc
     3181 aaacggtaat gcggtctcag caaccagact ccagactgcc cgcaggatta acaatgtgct
     3241 gtttgatggc acccgcgata tcaccatcaa caccaccgag cccggcgctg tgcgtaattt
     3301 ccagtacacc aatgaggtgt tttacaaccc gggcagtacc acaattacct ggaggtttcg
     3361 cgcaccttct ggctgccagt tgtcaggcat ttatgttcag gatacgggaa aaaatacagc
     3421 agacaatatc ggtggtgtgt attacaaaca ggctcagatt tatatcaatg gcgcatggcg
     3481 ctctgtatcc ggttaattaa ggagaaaata atggaactca gaaatgttac gcgttattac
     3541 cctgaaggta tgccttatgg tgaaggcatt cagtatttcc gcagtgaaga cgggcaggac
     3601 ttttatgaat ccctggataa attcacgaag aaatacaagc tgtgcacgca tcctgaaacc
     3661 ggcgtgattt attcgatggc ggaagacgta tcccgtcttt atcccgttgg ttttaccatt
     3721 gtggaagtgg atgaactgcc ggaaggcttt ggcattgaag cctgctggta ttataaaaac
     3781 ggcgaagttc ttcctgttcc tgttgattat ttgcggctgg cagaaaaaca gcgccagagc
     3841 ctgctgaatg aagcaaggga catcacctcc gactggaaaa ccgagctgga gctgggcacc
     3901 atcagcgacg atgacaaagc ccgtcttaca cagtggatgg cgtatatcag ggaggtaaag
     3961 acactggatt taagcaccgt tactgacgaa gcctccttta attccatcaa ctggccggag
     4021 cgtcccgatg ccgcagctta aaggtgtgat aaaaacgccc acgggagaac cgctgggcgg
     4081 cgcaaccatt acactgacct ccctgcacaa tcgtgcaggg atcctgaaaa gtgttttcag
     4141 ccacgtcacc acacagagtg gagagtacga cttccctgtt ctgccgggcg tgtacagcgt
     4201 tcgtctgaca cagagtgcac agtgcctttc agaaatcggt atcatccgcg tttatgaaga
     4261 ttcaacggac ggttcgctga atgattttct gggcgcaact gatattgacc tgcgtccgga
     4321 atccctgaag aaattcgaag agctggcgca acaggcgcag cagag
//
LOCUS       DAJVTL010000228         4325 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.230, whole genome shotgun sequence.
ACCESSION   DAJVTL010000228 DAJVTL010000000
VERSION     DAJVTL010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4325
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.230"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1279)
                     /locus_tag="OQQ26_004246"
     CDS             complement(<1..1279)
                     /locus_tag="OQQ26_004246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HCS1859479.1"
                     /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVL
                     ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
                     GVPVHSTAFRPIDDPSLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
                     QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFP
                     GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
                     AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP
                     DSEFLMRQHGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVS
                     AAGIFQSNLGNETQTRSHGNASREAFEQALGCPV"
     gene            1496..2419
                     /locus_tag="OQQ26_004247"
     CDS             1496..2419
                     /locus_tag="OQQ26_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310054.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HCS1859480.1"
                     /translation="MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSK
                     TLNELEQLTGARLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGQSLHRKEGLNNDV
                     VRVGALPTAALGILPSVISQFHQQQKETTLQLATMSNPMILAGLKAGEIDIGIGRMSD
                     PELMTGLNYELLFLESLKLVVRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDAL
                     VQSQGCKIPSGCIETLSASLSRQLTVEYDYVWFVPSGAVKDDLRHATLVALPVLGHGA
                     GEPIGILTRVDATFSSGCQLMINAIRKSMPF"
     gene            complement(2457..4097)
                     /gene="trg"
                     /locus_tag="OQQ26_004248"
     CDS             complement(2457..4097)
                     /gene="trg"
                     /locus_tag="OQQ26_004248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein Trg"
                     /protein_id="HCS1859481.1"
                     /translation="MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLW
                     QADRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESE
                     IKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHE
                     SEQIRPLDNAYTDILNKAIKIRSTRANQLAELARQRTRLGGMFMIGAFVLALVMTLIT
                     FMVLRRIVIRPLQHAAQRIEKIASGDLTMNDEPAGRNEIGRLSRHLQQMQHSLGMTVG
                     TVRQGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQTAASMEQLTATVKQNADNAHHA
                     SKLAQEASIKASDGGQTVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAV
                     EAARAGEQGRGFAVVASEVRTLASRSAEAAKEIEGLISESVRLIDLGSDEVATAGKTM
                     STIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAVS
                     LEEQAARLTEAVDVFRLHKHSVSAEPRGAGEPVSFATV"
BASE COUNT         1037 a         1152 c         1020 g         1116 t
ORIGIN      
        1 aaaccggaca acccaacgcc tgctcaaatg cttcgcgact ggcattaccg tgactgcgtg
       61 tctgcgtttc attacccaga tttgactgga agatccccgc cgcgctaacg ggcaagaaat
      121 cttcataggt gatgggttgc gccactaccc aaccacgttc aattaagggc tgtggatcgt
      181 ctccgggatg aatcgcctga cgatgcgcct cacccgaagg cgtcagacgg taccggaacc
      241 atgccaaccc atgctgacgc attaaaaact cactgtcagg aaaagtgcgg aaggtttcct
      301 gtaaatgcat ttggtgagtg agattatcct gcccggttcc agcgttacgc agaagatcat
      361 catacagttg tcgccctttc ggcgttaatg ccacgccacg ctgctcaatt tcaccaaagc
      421 gcgcggtatg cgtgccctgt ttctgcccgg caaacaacac cgtctcttcc agtgctttaa
      481 agctggtctg gcgtagtaaa atcggtacct cgcggcgcgg cggcccttcg atcagaattt
      541 ttggttcaat tccgcattca ggcatcatcg actgcacccg gtcaatatcc agcgtacgtg
      601 gcgtcagatg gttgatatgg catccaggaa aacagaccac atcagcaatc aaccgatgtt
      661 cgttgtgcaa ggcgcgatag gtttcttcat ctaccgttgc tgactggtgc cagcgaaacg
      721 tttccagggc ttcctgcaca aactcctgtg cctgtgtttc gttaaaaccg ccctgctgct
      781 catattcctc taacagttgt cgacaacgtg gggtgaagat atcgcgctga cgcagaatct
      841 ccgccgcttt ctggcgcaaa atttcgttct cgataagctc aaggcggagt aaggaggtaa
      901 aaacgcggaa gggattacgc gccagagaag gatcatcaat gggccgaaat gctgttgaat
      961 gtaccggcac ccctgcctgc gagagatcgt aatagctcac cggatacatc cccataatgg
     1021 caaacatccg cctaagagta gcaagctctt gtgcagtccc aacgcgaatc gccccatgac
     1081 gttcaacatt cagtcgcgcc agctcgtctg catttaccat tttttcgtgc agttgaggat
     1141 tgttttccag cacagccaga ttcacatcag ctaccagttc cagcagcgtg ccgtactgcg
     1201 gaacttcttg ctggtacatg gctgacattg cctgcgaaaa ctgttcccga atctcatccg
     1261 ccgtgatgct gttcgccata gtgtctgcct ccagtggtca gtaatctgga gtgtaggtaa
     1321 ccgcattcac tctggcggga agaatttaca aactgtgatc tcgccgtaaa aacatcaata
     1381 ttatccattt tgctgtaaca caattgcctt aattgttaat aatattttgc aatcaagtta
     1441 tcataatcaa acaacttcac ttgtcagcga caccgcttcg tttttaacat cgcttatgga
     1501 aaaaaatagt ctgtttagtc agcgcatccg tttgcgccac cttcatacat tcgtagctgt
     1561 cgcacaacaa ggaactttgg ggcgcgcggc tgaaaccctt aatttgagtc aacctgcact
     1621 ctctaagaca ttgaatgaac tggagcagct gacgggcgct cgcttgtttg agcgtggtcg
     1681 tcagggggcg caacttacct tacccggcga acaattttta acgcatgcag tcagagttct
     1741 tgacgccatc aacactgccg gacagtcgct tcatcgtaaa gaaggtctta ataatgatgt
     1801 cgtcagggtt ggtgcgctac ctactgcggc gctggggata ttaccttcgg ttataagtca
     1861 gtttcatcag caacaaaaag agacgacctt gcaacttgcg acaatgagta accctatgat
     1921 tctggcgggt ttaaaagccg gggaaatcga tatcggcatt ggtcggatgt cagatcctga
     1981 actgatgacc gggcttaatt acgaactgct gtttcttgaa tcgctgaagc tggttgtccg
     2041 ccctaatcac ccgctacttc aggagaacgt aacgctaagc cgagtgctgg aatggccggt
     2101 cgttgtatca ccagaaggca ctgcgccacg tcagcattca gatgcattag tgcagagcca
     2161 gggctgtaaa attccttcgg gttgtatcga aacgctgtct gcttcgctat ctcgtcaact
     2221 tacggttgaa tacgactacg tgtggtttgt cccttctggc gcggtaaaag acgacctgcg
     2281 tcatgccacg ctggtggccc tgcctgttct gggacatggt gcaggcgaac cgattggaat
     2341 actgacccgc gtagatgcga cgttctcttc tggttgccag ttgatgatta acgctattcg
     2401 aaaatcaatg ccgttctgaa aggtgaaggg atctgtcgat ccctccttga acattttcac
     2461 accgtagcga aactaactgg ttcacccgct ccgcgaggtt ctgccgacac agaatgtttg
     2521 tgcagacgga atacatccac cgcctcagtt aatcgtgccg cctgttcttc aagtgacacc
     2581 gccgccgctg aggcttcttc taccagagaa gcattctgtt gcgtcacctt atccatttca
     2641 gaaatcgcct ggctaacctg cgttatgcct ctactttgtt catccgaggc ggcggcgatt
     2701 tcctgcatga tatgtgtgac actcgcgacg gcatcaacaa tagtgctcat ggttttccct
     2761 gccgttgcca cctcatccga ccccaggtca attaacctga ctgattcact gatcaagcct
     2821 tcaatctctt tcgccgcctc agcgctgcga cttgcgagtg tccgtacttc gctggcgaca
     2881 acggcaaatc cacgcccttg ctcacccgct cgcgcggctt caacggcagc attcagtgcc
     2941 agaatattcg tctggaaagc aatactgttg atgacggcgg tgatctcaga aattttcttc
     3001 gaacttgtag agatagcgcc catcgttttt actacaccgg aaaccgtctg cccgccatcg
     3061 ctggctttaa tagaagcctc ttgcgccagt ttgctggcat gatgcgcgtt atccgcattc
     3121 tgtttcaccg tcgcagtgag ttgctccatg ctggcggcag tttgttcgat agccgccgct
     3181 tgttcttcgg tgcgagatga caggtccgca ttgccagcgg aaatttcgct ggtgccacga
     3241 taaatctctt ccgcgccctg tcgaacagtc cctactgtca tccccagtga atgctgcatt
     3301 tgctgtaaat gacgacttaa gcgaccgatt tcattacgac ccgccggttc atcattcatc
     3361 gtcagatcgc cactggcgat tttttcaatc cgttgtgcgg catgttgcag tggacgaatg
     3421 acgatccgac gtagcaccat aaatgttatc agcgtcatga ccaaggcaag cacaaacgca
     3481 ccaatcatga acatcccacc caggcgggtg cgctgacggg ccagctccgc cagttggttg
     3541 gctctggtgc tacgtatctt tatggctttg ttcaaaatat cggtataagc attatccagc
     3601 ggtcggatct gctcactttc atgattgata atcgcttcaa acatgccatt tttggcatat
     3661 ttcaacatag gttgcatacc cgtgatataa gcctgaaagc gttgatttaa ttcagtgtcg
     3721 agggcttcat cagcaggtgt tttcaccggc cgattctgat aagcacgata cccttgctgc
     3781 gactgtttaa tctccgattc ggcttgcgca atatttcgct tcattgcttc catttccgca
     3841 atacgactcg cagccccggc ctgaatcata ttgatccggg ctgaacgcaa aaaatctgaa
     3901 ctgttcgcta acccggtccg aatctcaatc tccgcagtaa catcacgctg atcgcgatcg
     3961 gcctgccaga ggaaatagcc ggcaagggct gaacttaatg cgaatagaac taagataccg
     4021 ccaagaatgc aggcaaataa cggaaccagc ctgatgtgat gcaaaaaacc taatcgctgt
     4081 gagggagttg tattcattac cgttgtctct cgtccaggtt tactcctgat agaaaatcat
     4141 cggcatttga cggtaattac ttacgaccaa aaacctcttt gcgtcacatt tttacaacaa
     4201 ttattgcaga gaagattaat gccattggaa tgaagagagt aacgaatggc taaaccgaat
     4261 gacgaaaaat tctggaaaac agcacgcaat ttcgtcaggt gattattttc gtccctaagg
     4321 aaacc
//
LOCUS       DAJVTL010000229         4296 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.231, whole genome shotgun sequence.
ACCESSION   DAJVTL010000229 DAJVTL010000000
VERSION     DAJVTL010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4296
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.231"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..134)
                     /locus_tag="OQQ26_004249"
     CDS             complement(<1..134)
                     /locus_tag="OQQ26_004249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HCS1859482.1"
                     /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA
                     G"
     gene            470..1672
                     /gene="nupC"
                     /locus_tag="OQQ26_004250"
     CDS             470..1672
                     /gene="nupC"
                     /locus_tag="OQQ26_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HCS1859483.1"
                     /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
     gene            complement(1722..3911)
                     /locus_tag="OQQ26_004251"
                     /pseudo
     CDS             complement(1722..3911)
                     /locus_tag="OQQ26_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416896.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
     gene            complement(4119..4194)
                     /locus_tag="OQQ26_004252"
     tRNA            complement(4119..4194)
                     /locus_tag="OQQ26_004252"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4159..4161),aa:Ala,seq:ggc)
BASE COUNT         1138 a         1096 c          990 g         1072 t
ORIGIN      
        1 cccgcctgaa tattggtcgc aaagttaccg ggatcgatat aaccaatcgc cgcaatgaac
       61 gcaggtccca ttaatgcgag cctcatcttg cgcgccgccc gtccgctgct actctcaacg
      121 cgatagttcg tcatcttgtg cctctaaaac atagcctttg ctatgtttca tgccatgcta
      181 aacgagaatg attatcaaat tcatttaaat ggattgtggt gatttctctg atagaccagg
      241 attatgacta cgaaaagatt gatgacttga atgttatggt tatgtttaat gttagcacat
      301 ttacataact ttcagcttcc atacacaaca tagcagaaat gtatgacaga tcactatttt
      361 tgaagcttgt cacaggacgt cattatagtg tgtgtcagat ctcgttttcc ttaaccatgt
      421 tacatagaat gtgcacggaa atttaacctg cctcatattt ggagcaaata tggaccgcgt
      481 ccttcatttt gtactggcac ttgccgttgt tgcgattctc gcactgctgg taagcagcga
      541 ccgcaaaaaa attcgtatcc gttatgttat tcaactgctt gttatcgaag tgttactggc
      601 gtggttcttc ctgaactccg acgttggttt aggcttcgtg aaaggcttct ccgaaatgtt
      661 cgaaaaactg ctcggatttg ccaacgaagg gactaacttc gtctttggta gcatgaatga
      721 tcaaggcctg gcattcttct tcctgaaagt gctgtgccca atcgtcttta tctctgcact
      781 gatcggtatt ctccagcaca ttcgcgtgtt gccggtgatt atccgcgcaa ttggtttcct
      841 gctctccaaa gtcaacggca tgggcaaact ggaatccttt aacgccgtca gctccctgat
      901 tctgggtcag tctgaaaact ttattgccta taaagacatc ctcggcaaaa tctcccgcaa
      961 tcgtatgtac accatggcag caacggcgat gtccaccgta tctatgtcca tcgttggtgc
     1021 atacatgacc atgctggagc cgaaatatgt cgttgcggcg ctggtactga acatgttcag
     1081 cacctttatc gtgctgtcgc tgatcaaccc ttaccgtgtt gatgccagtg aagaaaacat
     1141 tcagatgtcc aacctgcacg aaggtcagag cttcttcgaa atgctgggtg aatacattct
     1201 ggcaggtttc aaagttgcca ttatcgttgc cgcgatgctg atcggcttta tcgccctgat
     1261 cgccgcgctg aacgcactgt ttgccaccgt gactggctgg tttggctaca gcatctcctt
     1321 ccagggcatc ctgggctaca tcttctatcc gattgcatgg gtgatgggtg ttccttccag
     1381 tgaagcactg caagtgggca gtatcatggc gaccaaactg gtttccaacg agttcgttgc
     1441 gatgatggat ctgcagaaaa ttgcttccac gctctccccg cgtgctgaag gcatcatctc
     1501 tgtgttcctg gtttccttcg ctaacttctc ttcaatcggg attatcgccg gtgcagttaa
     1561 aggcctgaat gaagagcaag gtaacgtggt ttctcgcttc ggtctgaagc tggtttacgg
     1621 ctctaccctg gtgagtgtgc tgtctgcgtc aatcgcagca ctggtgctgt aagaccatac
     1681 ataaaaaagc cggggataat tccccggctt ttttacgcct gttaatcagc taatggctgc
     1741 gggcgaccaa tcaaataccc ttgcagatat tgcaccccga gcttatgcaa taacgcctgc
     1801 tgctgttgcg tctcgacaaa ctccgcgacc acactcaatg acttcgcttt cgccagatcg
     1861 gtaattgatc tcacaatcat cgcatccagc gtattcgtga caatatcttt cacaaagacg
     1921 ccatcaattt tgatgatatc agcctgcaaa cgctttaacc gctcgtagtt tgcatatccg
     1981 gtgccaaagt catcaatcgc aatccggaaa ccaaacttat gcaactgctc gatgttgtac
     2041 atgctgcttt ctgcgttaga aaacgcctgc tcctcggtga tctcaagaat gaccgcctgc
     2101 ggggagatgt gataacgctt aaacagacga ataatccgcc cggcaatatt cttttgcagc
     2161 agcgtgagcg gcattaaatt gactgaaaag cgcggtcctt ttttgtcgca agggtgtgtt
     2221 gccagccact tcaacaagga ttccagcact tgcaaatcaa aacgcgcgct aaggttaaac
     2281 tgagcaataa ggggcagaaa cttatccggg gtcataatgc cgccgtcata cttcagtcgc
     2341 gcgaggatct catcataacc ttcaccctct ttgttgcgaa ttggctgggc gtagagcagc
     2401 aaatccccct gatctaacgc cgtgcgaatg gtattcagca atagcacctg tttagtggtc
     2461 tgcccggaaa ccatctcctc tctgctatcc agcgccagca catgatgatg tgcgcaggat
     2521 tgctccgcca gccagcttaa ctgccccaac aagggttgca gggtttcctg atttccatca
     2581 aaacgccccc aggcagcacc atagcccata tccagcccgg tattgttcca gtgaatttgc
     2641 cgactattca ggatgttaac catatgctgg agtcaccctt ccgtttccgg cccgctcagc
     2701 actaacagca gttcactacc cggcaattga tacaactttt cgttttcctg catcaacggc
     2761 agcagcgtac ggcaaattga gcggatacag tgaacgcgca tcattaagcc gtaatgacga
     2821 ctcataaact caagattatc aatgcgcagg cagcaaaaac tcttgcccgc ctcttgctcc
     2881 ggcgcttgtt ccaacgcacg aaagttgggt aggagcgtta acggatctgt cagcgcctgc
     2941 aaatgccagc ggcgattaag ccattcactg cgatgataaa tgcgcaccat atagagcagg
     3001 caaacgctaa aggaaatcag caccgcgaga ataaatgcca gcgaatattc ggtttccacc
     3061 ccttgcaaaa agttctggtt gtaattcagc aggcaaagcg ttgaaacagc ccaggtgaga
     3121 tttaaaaacg gatagcgaag cttaccgacc ccgagggtaa agatgatgaa gaaaacgggt
     3181 accaggtaac cggcaataaa gtcgttttca taaggtgtgc acaacagaag tagcagcacg
     3241 cttaacgctg ccagccagct taaggtaaat gcgcgtttct ctttgcccaa cgacggagcg
     3301 atatccctgc gccacaatat ctgcgcaaag tggggactta caatcatgcg agtgagatag
     3361 tagaaaagca tgttgtaaat cagcacagcg gtgaaaaggc ttagtaaatc aacgaccgtg
     3421 aaaatggcat ccgcatcgcc gaaaaaagtg gatatcttta gcgggaaatc aaagaagctc
     3481 cccacaagat acatgctaca tttgatgccg atcggcgtca ccaaaccaag ccagaacaga
     3541 cgttgccaga catatcggct ggtcaatcca taacgccaac gcgtccccaa ctgccagcgt
     3601 aatattgcgc aggcacacaa cacgacaaac gtctggctac cgagcatgac cgcagtctgt
     3661 aaaaaagaga gatgaaagtt ccacagattg gtgcaaaaca tcccgcataa aacgggaacg
     3721 acaccgcgcc agccaaagat aaacaagatt gacagcatta cgcacagtgg catccacgcc
     3781 agaaagatat aactggaatg gataatggca agtggcgaaa taaaacggga tagctgaata
     3841 agtaccacgg tgagcgtaaa cgctagtgtg aatatcttga tattttttat caggttatgc
     3901 tccacaaaca tgagtacact actctcactg atcggggttt tcaggcacac aaataataag
     3961 tttattcgca tcgcgaagca aacaggggcc agcctgttgc cgatttttca tccaatgatg
     4021 ctttcaccag gcggcactaa cccggacgta gactgtatta caaaagcggc aaaaagcaga
     4081 gacaaaaaac ccccgctttg cagcgagggt tggaaatttg gtggagctaa gcgggatcga
     4141 accgctgacc tcttgcatgc catgcaagcg ctctcccagc tgagctatag ccccacgatg
     4201 cgtttatgta ccaaatttgc tgggtgcaaa atttggtgga gctaagcggg atcgaaccgc
     4261 tgacctcttg catgccatgc aagcgctctc ccagct
//
LOCUS       DAJVTL010000230         4245 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.232, whole genome shotgun sequence.
ACCESSION   DAJVTL010000230 DAJVTL010000000
VERSION     DAJVTL010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4245
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.232"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..269)
                     /gene="tuf"
                     /locus_tag="OQQ26_004253"
     CDS             complement(<1..269)
                     /gene="tuf"
                     /locus_tag="OQQ26_004253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HCS1859484.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYV"
     gene            complement(384..459)
                     /locus_tag="OQQ26_004254"
     tRNA            complement(384..459)
                     /locus_tag="OQQ26_004254"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(424..426),aa:Thr,seq:ggt)
     gene            complement(466..540)
                     /locus_tag="OQQ26_004255"
     tRNA            complement(466..540)
                     /locus_tag="OQQ26_004255"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(505..507),aa:Gly,seq:tcc)
     gene            complement(657..741)
                     /locus_tag="OQQ26_004256"
     tRNA            complement(657..741)
                     /locus_tag="OQQ26_004256"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(705..707),aa:Tyr,seq:gta)
     gene            complement(750..825)
                     /locus_tag="OQQ26_004257"
     tRNA            complement(750..825)
                     /locus_tag="OQQ26_004257"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(790..792),aa:Thr,seq:tgt)
     gene            1187..2137
                     /gene="coaA"
                     /locus_tag="OQQ26_004258"
                     /gene_synonym="panK"
     CDS             1187..2137
                     /gene="coaA"
                     /locus_tag="OQQ26_004258"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HCS1859485.1"
                     /translation="MSIKEQTLMTPYLQFNRNQWAALRDSVPMTLSEDEIARLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVNAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMT
                     LWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK"
     gene            complement(2166..3131)
                     /locus_tag="OQQ26_004259"
     CDS             complement(2166..3131)
                     /locus_tag="OQQ26_004259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     synthetase/biotin operon repressor"
                     /protein_id="HCS1859486.1"
                     /translation="MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELK
                     SGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEV
                     LRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESV
                     VNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPV
                     KLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK"
     gene            complement(3128..4156)
                     /gene="murB"
                     /locus_tag="OQQ26_004260"
     CDS             complement(3128..4156)
                     /gene="murB"
                     /locus_tag="OQQ26_004260"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HCS1859487.1"
                     /translation="MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQHATAEGQPVL
                     ILGEGSNVLFLEDYRGTVIINRIKGIEIHDKPDAWYLHVGAGENWHRLVKYTLQEGMP
                     GLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRD
                     SIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVSAETAEALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKG
                     MQMGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQNVGEKFNVWLEPEVRFIGASGE
                     VSAVETIS"
BASE COUNT         1092 a         1047 c          955 g         1151 t
ORIGIN      
        1 ttaacatagt cggcgtgccc cgggcagtct acgtgtgcgt agtgacgggt cggggtgtcg
       61 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
      121 atctggtcga atgcgcgagc agcaccgccg taggttttag ccagtacggt agtgattgca
      181 gcggtcagcg ttgttttacc atggtcaacg tggccgatag taccgacgtt aacgtgcggt
      241 tttgtacgtt caaacttttc tttagacatc gattgtccct ctaagacacg gataaatcgg
      301 tgatatcacc acatcaacca agcaacatgc ccgacttgtt gaatgcaata aacagaagga
      361 aaaaacaggg aggagaaaag aagtggtgct gataggcaga ttcgaactgc cgacctcacc
      421 cttaccaagg gtgcgctcta ccaactgagc tatatcagca catcttggag cgggcagcgg
      481 gaatcgaacc cgcatcatca gcttggaagg ctgaggtaat agccattata cgatgcccgc
      541 atcctggaac tcggctacct gattttcatt ctgcactgaa tatcgagaga agctctcttt
      601 attcgagccg gtaagcgaac ttatcgtctc gggctacgcc atcgcgtggc cgaaattggt
      661 ggtgggggaa ggattcgaac cttcgaagtc tgtgacggca gatttacagt ctgctccctt
      721 tggccgctcg ggaaccccac cggacttgat ggtgccgact accggaatcg aactggtgac
      781 ctactgatta caagtcagtt gctctaccta ctgagctaag tcggcatcaa gtagcgcgca
      841 ttctatggag acatgcgagt tcatgcaact aaaaaattgc ataatttgtt ttattggtca
      901 cattttatgc gacacgatga agaaacagcc gaacggaagg cagattagca cactttttca
      961 acatcattgt gctcaacaat gcgctcctgc taaaccataa ttctttttat cagatggaat
     1021 atccgtcaca ttgcttttca acgatagctt cctgggagag attttttctt attattcctc
     1081 cccatctggt gttaccctcc tgcccattaa cccattcaac agaactgtga tgcgccatgg
     1141 caaatatcgc tttgccgata gagctatgac cgccagaaac atgcttatga gtataaaaga
     1201 gcaaacgtta atgacgcctt acctacagtt taaccgcaac cagtgggcag ctctgcgtga
     1261 ttccgtacct atgacgttat cggaagatga gatcgcccgt ctcaaaggta ttaatgaaga
     1321 tctctcgtta gaagaagttg ccgagatcta tttacctttg tcacgtttgc tgaacttcta
     1381 tataagctcg aatctgcgcc gtcaggcagt tctggaacag tttcttggta ccaacgggca
     1441 acgcattcct tacattatca gtattgctgg cagtgtcgcg gtggggaaaa gtacaaccgc
     1501 ccgtgtattg caggcgctat taagccgttg gccggaacat cgtcgtgttg aactgatcac
     1561 tacagatggc ttccttcacc ctaatcaggt tctgaaagaa cgtggtctga tgaagaagaa
     1621 aggcttcccg gaatcgtatg atatgcatcg cctagtgaag tttgtttccg atctcaaatc
     1681 cggcgtgcca aacgttacag cccctgttta ctcgcatctt atttatgatg tgatcccgga
     1741 tggagataaa actgttgttc agcctgatat tttaattctt gaagggttaa atgtcttaca
     1801 gagcgggatg gattatccac acgatccaca tcatgtattt gtttctgatt ttgtcgattt
     1861 ttcgatatat gttaatgctc cggaagactt acttcagaca tggtatatca accgttttct
     1921 gaaattccgc gaaggagctt ttacagaccc ggattcctat tttcataact acgcgaaatt
     1981 aactaaagaa gaagctatta agactgccat gacgttgtgg aaagagatca actggctgaa
     2041 cttaaagcaa aatattctac ctactcgtga gcgcgccagt ttaatcctga caaaaagtgc
     2101 aaatcatgcg gtagaagagg tcagactacg caaataattt tcaggggagc taatgctccc
     2161 ctttcttatt tttctgcact acgcagggat atttcaccgc ccatccaggg ttttattatt
     2221 ccatcctgct caagcaataa agcgccctgt ttgtctattc cgcgtgaaat gccaaatatt
     2281 tctttatcac caatgataag tttcactggg cgattaataa aattatccag cttttcccag
     2341 cgcgaaagat aaggtgccaa tccttcttgt tcgaagagtt ccagcgccgc gcgtaattca
     2401 cgtattagca tggccgccaa cgtattacga tcgagattga tccccgcttc ctgcagcgtg
     2461 atccacccct gattaacgac actctcttca acacgacgca ttgccatgtt gatcccggct
     2521 ccaatgacta tttgcgccgc atcgccggtt ttgccagtca gctccacaag aatgcctgcc
     2581 agcttgcgat cctgcagata gaggtcatta ggccatttaa cacgaacttt atctgcaccc
     2641 agcttgcgta atacttccgc catcacgata ccgataacca gacttaaacc aatcgccgcc
     2701 gccgggcctt gttccagacg ccagaacatc gacaaatata agtttgcgcc aaaaggcgaa
     2761 aaccatttcc gaccccggcg accacggcca gcctgctggt attctgcaat gcaagcatcg
     2821 cccgatttaa gctctccgat acgatcaaga aggtactgat tcgtggagtc aatcactggc
     2881 agcacggcca cactaccgcc atccagctga cccaatatct gtttagcatt aagtaactgg
     2941 ataggctcag gcaggctgta tcctttaccc ggaacggtaa agacatcaac gccccagtca
     3001 cgcagtgtct gaatgtgttt attaatagcc gcccggctca ttcccagcgt ttcacccaac
     3061 tgctcgccag agtgaaattc accgttcgct aatagggcga tcaatttcag tggcacggtg
     3121 ttatccttca tgaaatcgtc tccactgcgc taacttcacc tgatgcacca ataaagcgaa
     3181 cttcaggctc aagccagaca ttaaattttt cacccacgtt ttgtcttaca tggtgtgcca
     3241 gttgcaccac atcttcgctt tttgcattgt cttcattaat gagaactaac gcctgttgac
     3301 ggtgcaccgc agccccaccc atttgcatcc cttttagctg gcactgatcg ataagccaac
     3361 ctgctgccag ttttactgaa ccatccgcct gggggtaatt tggtgctgtt ggaaattgtg
     3421 acagtaatgc ttcagccgtt tcggcagata caacagggtt tttgaagaaa ctaccggcat
     3481 tgccattcac ttttggatca gggagtttgg tggtacgcat atgacacacc gcattaaata
     3541 cttgctgtgg cgttactgtt gtaggatcca gacgagttaa gtcaccatac gttagtacag
     3601 gttgccactc ttttggcaga cgcagaccta cggctacaat ggcgaagcgg tcctggtatt
     3661 catgtttaaa aatactgtcg cgatagccaa aacggcactc tttggcagtt aagcgcactt
     3721 gcttgcctgt cgccagttca acacaatcaa cataagcgca aactcgctgt aattctacgc
     3781 cataagcacc aatattctgg ataggtgatg agccgacaca accaggaatt aatgccagat
     3841 tttccagacc aggcatacct tcctgcaaag tgtattttac caggcgatgc cagttttctc
     3901 cggctcctac atgtaaatac catgcatcag gtttatcatg aatttcgata cctttgatcc
     3961 ggttgatgat caccgtgccg cgatagtctt ccagaaaaag tacattactt ccttcaccca
     4021 gaataagaac gggttgtcct tctgcggttg catgctgcca ggcattgagt agttgttgtt
     4081 cgtcttcggc acatacaatg tgctgagcat tatgatcaat gccaaatgtg ttccagggtt
     4141 ttaaggagtg gttcatagct gctttcctga tgcaaaaacg aggctagttt accgtatctg
     4201 tggggggatg gcttgtagtt atgacgacag ggagagtttg tagaa
//
LOCUS       DAJVTL010000231         4207 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.233, whole genome shotgun sequence.
ACCESSION   DAJVTL010000231 DAJVTL010000000
VERSION     DAJVTL010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.233"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(387..1649)
                     /locus_tag="OQQ26_004261"
     CDS             complement(387..1649)
                     /locus_tag="OQQ26_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HCS1859488.1"
                     /translation="MSLNDSKIRKLKPSSRPVKLSGSHGLYLLVNPSGSRIWYRKYRF
                     NGKESRVSLGAYPLASLAEARQQRDGIRKLLAQNINPAQQRMAEKAACSPEKCFKAVA
                     LAWHKTNKKWSAEYAARILASMENHIFPAIGHLPVATLKTQDFTALLLIIEDKGFLEV
                     ASRTRQQLSNIMRYAVQQGLTASNPAQHLDGVVASPVKNHYPALPLERLPELLGRIGD
                     YRQGRELTRLAVGLTLHLFIRSSELRFARWSEIDFRHKIWTIPATREAIDKVRFSGRG
                     AKMRTPHIVPLSRQAIAILKQIQELSGHLDLVFPGDHNPYKPMSENTTNRALRLMGYD
                     TKTEVCGHGLRAMACSALVESDLWSRDTVERQMSHQERNSVRAAYVHKAEHLEARKAM
                     MQWWSDYLDVCREGYVAPYIYARQHKAA"
     gene            complement(1811..1886)
                     /locus_tag="OQQ26_004262"
     tRNA            complement(1811..1886)
                     /locus_tag="OQQ26_004262"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1851..1853),aa:Asn,seq:gtt)
     gene            complement(1987..2784)
                     /gene="mtfA"
                     /locus_tag="OQQ26_004263"
     CDS             complement(1987..2784)
                     /gene="mtfA"
                     /locus_tag="OQQ26_004263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HCS1859489.1"
                     /translation="MIKWPWKVQESAHQTALPWQEALSFPLLTCLTEQEQSKLVTLAE
                     RFLQQKRLVPLQSFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD
                     RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE
                     YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH"
     gene            2878..2967
                     /locus_tag="OQQ26_004264"
     tRNA            2878..2967
                     /locus_tag="OQQ26_004264"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2912..2914,aa:Ser,seq:cga)
     gene            complement(3020..4045)
                     /locus_tag="OQQ26_004265"
     CDS             complement(3020..4045)
                     /locus_tag="OQQ26_004265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1859490.1"
                     /translation="MGRRRKNPEHEKLPPNVYPNKYSYVWKPTSRESVTLTAIKDGLA
                     ALWKKYEETVNNRDRAMTFGRLWEKFLASAYYSDLSPRTQKDYLQHQKKLLAVFGKVP
                     ADSIKPEHIRRYMDKRGEQSKTQANHEKSSMSRVYSWGYERGYVKANPCAGVSKFKAK
                     NRERYVTDKEYQAVLSVAPLPVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGK
                     TGKKQIKAWSPRLQAAIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKIS
                     GILTDFTFHDLKAKGISDYEGSSRDKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPEN
                     IPRKYSK"
     gene            complement(4045..>4207)
                     /locus_tag="OQQ26_004266"
     CDS             complement(4045..>4207)
                     /locus_tag="OQQ26_004266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HCS1859491.1"
                     /translation="TGCKYASHQRKWLMENGLPFYTNRSGKPIVSRELFTCNKTLPPR
                     EVEPNFGAI"
BASE COUNT         1063 a         1017 c          960 g         1167 t
ORIGIN      
        1 tctgatgtag ttcttacagg cttcagagta tagggtcagg agatattctg gagtattaat
       61 tggaatttcc gtgaaaatat cacgtattga tagcttttca tcttctgtga tttgcgggca
      121 aatcacagaa ggtagttatc tatcaataat atatttatta ataggcaatc gcctgaaaat
      181 actctacttg aataatttct ggtacttacc tattaataag tagttcattg attggttttc
      241 acccaaaatt atttggggcc aaatatttat agatgttttc cgattgataa taacaaaaaa
      301 acggcaatat ctatcaacaa aaaaaagcag atcccggtca atcaggatct gcttttccag
      361 ttttaatgat ttacgctatt tctgattcag gctgccttat gctgccgcgc ataaatgtac
      421 ggcgcgacat acccctcgcg gcacacatcc agataatccg accaccactg catcatggcc
      481 tttctggcct ccagatgctc tgctttatgc acatatgccg cccgcacgct gttgcgctcc
      541 tggtggctca tttgccgctc caccgtatcg cgtgaccaca ggtccgactc caccagggcg
      601 ctacaggcca ttgccctgag tccatgccca cagacttcag ttttcgtatc ataccccatc
      661 agacgcagcg cccggttggt ggtgttttca ctcattggct tgtacggatt atggtcgccg
      721 ggaaacacca gatccagatg gccggaaagc tcctgtatct gtttcagaat ggcaatcgcc
      781 tggcgggaga gcggcacgat atgcggggta cgcatttttg cgccacgccc cgaaaaccgt
      841 actttatcaa ttgcctcgcg ggtggcggga atggtccaga ttttgtgcct gaaatcgatc
      901 tcgctccagc gggcgaaacg cagctcgctg gaacggataa acagatgcag cgtcagcccc
      961 accgccagcc gggttaactc ccggccctgc cggtagtcgc caatgcggcc aagcagttca
     1021 ggcaatcgct ccagcggtaa agcgggatag tgattcttta cgggtgaggc gacaacgcca
     1081 tccagatgct gcgccggatt gcttgcggtc agtccctgct gaacggcata gcgcatgatg
     1141 ttgctgagtt gctgccgggt tcgggacgcg acttccagga agcctttatc ctcaataatc
     1201 agcagtaaag ccgtgaaatc ctgcgtttta agcgtggcaa cgggcagatg accaatcgcc
     1261 gggaagatat ggttttccat actggcgaga atacgggcgg catactcagc cgaccatttt
     1321 ttgttggttt tgtgccaggc cagcgccacc gccttaaagc acttttcagg ggagcaggct
     1381 gctttctctg ccatgcgctg ctgcgccggg ttgatattct gcgccagtaa cttacggata
     1441 ccgtcgcgct gctgcctggc ttctgccagt gaggccagcg gatatgcgcc aagactgact
     1501 ctggattctt ttccgttgaa acgatatttg cgataccaga tgcgtgaacc gctcggattg
     1561 acgagcagat acagaccgtg agagccggag agttttaccg gacgggaaga gggttttaac
     1621 ttgcggattt tagaatcgtt taaagacatt tgagggtcac tccagaatcg aaccaaactg
     1681 cccccagatc tgaccaccaa attatcccga tgcggagaga aaactagata cgcaccggga
     1741 aggattttca cgctaactta ctgaatcgta aacaaataga aacgtacaga taagcatgaa
     1801 aacttgaatt tggctcctct gactggactc gaaccagtga catacggatt aacagtccgc
     1861 cgttctaccg actgaactac agaggaatcg tgtgaacggg gcgcatatta cttagcggta
     1921 ccttgtctgt caacactaaa tttcataagt catttcaatt ggttaattaa tctgcaaagt
     1981 tgttaattaa tgaacattcg tcgccgaaaa cgagtctgta tcattagcgt gatgcagtct
     2041 ctgcaaagga tcttgttgat aaaattggca gaaacgttgc cacaatgaag ggaaacgagg
     2101 agcaaaaagt tctggggcgc taaagaaata ttcagaaagt acggcaaaac attcagcagg
     2161 atcgctggca gcataagcat caatgctcgc cgcattctcg ccaactaatt cgatttcttc
     2221 ctgaatgttg ttcattgcag catgaagatc gtgttcccag ccagcaacct cacgcaacgg
     2281 aataaaggga actccgctgg cgcgatcgcc gttacgggtg tccagcttat gagcgacttc
     2341 atgaataatc aggttaaaac cagaagcatc aaaagaatct tgtatatcca accagttcaa
     2401 aacgataggc ccttgctgcc agctctgacc tgactgaaca atacgttggt tatgcaccag
     2461 accgatatcg tcttcccatt catcatcgac cacaaatggc gcaggataaa ttaagacttc
     2521 atgaaaacca tccagccatt ccagtcctaa ctccagaacg ggtaggcaaa atagaagtgc
     2581 tatccggcag cttcttaatg aatccagttc aaagctctgt aaaggaacaa gccgcttttg
     2641 ctgtaaaaaa cgttcggcaa gagtgactaa tttgctttgt tcctgttccg tcagacacgt
     2701 taaaaggggg aacgatagtg cttcctgcca gggaagggca gtttgatgtg ctgattcttg
     2761 tactttccag ggccacttaa tcatcgtttt gctcgcaaac tcgtcacttg aacaaaattg
     2821 cacggacagg gactgttaaa atgccaaatt tcttggcatc atggcaacca tctgaacgga
     2881 gagatgccgg agcggctgaa cggaccggtc tcgaaaaccg gagtgggggc aactccaccg
     2941 ggggttcaaa tccccctctc tccgccaaaa ttcaatcact tatacatcat taagtcagtg
     3001 acaaaaatca cacttggaat tacttggaat attttcttgg aatattttca ggtaacggga
     3061 catcaagtgt cggtgaaact ttaaccttcc tgtcatagat tagcacttgc ccctcggttt
     3121 tgtgaccaga gaaaagttgc ttatcccgac tgcttccttc atagtctgaa attcctttcg
     3181 ccttcagatc atgaaaggtg aagtcggtta aaatacctga aattttgcct gcgcgatttc
     3241 ttgcttctac ccacatttcg ttaaagcctt tgtacatata tcggttgccg tattgattgc
     3301 tgattacata ggcggatgtt ggtaactgtt ttgctttttc gatcgccgcc tgtaatcgtg
     3361 gactccatgc ttttatctgt ttttttcctg ttttcccttg ctggataaag atcccgtcgt
     3421 ttccaatctg ctcccatttc agcgataaca catcggaaac cctcgctgca cacagatagg
     3481 caatttccat tgcgataaaa acaggaagag gtgcaacgct taatactgcc tggtattctt
     3541 tgtcggttac atatcgttcg cggtttttgg ccttgaattt acttacacct gcacatgggt
     3601 tagccttcac gtaccctcgc tcataccccc aactgtaaac gcgggacata ctgctttttt
     3661 catggttggc ttgcgtttta ctctgttccc ctctcttgtc catgtatcga cggatgtgtt
     3721 ctggttttat ggaatctgcc ggcaccttac cgaatacggc aagcaacttt ttttgatgtt
     3781 gcagataatc tttttgtgtt cttggactga ggtcactgta ataggcgctg gcgaggaatt
     3841 tttcccacaa gcgaccgaat gtcattgcac gatcgcgatt atttacagtt tcctcatact
     3901 ttttccataa agcagctaaa ccatccttga tggcggttag tgttacagat tctctggatg
     3961 ttggtttcca tacataacta tatttatttg ggtatacatt tggaggtaat ttttcgtgtt
     4021 caggattttt ccttcgtctt cccatcagat cgcaccaaaa ttcggctcta cctcgcgtgg
     4081 tggtaaagtt ttattgcagg taaatagctc ccggctgaca atcggtttgc cactacgatt
     4141 ggtatagaac ggaagcccgt tttccattaa ccattttcgc tggtggcttg catatttgca
     4201 gcccgtt
//
LOCUS       DAJVTL010000232         4189 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.234, whole genome shotgun sequence.
ACCESSION   DAJVTL010000232 DAJVTL010000000
VERSION     DAJVTL010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4189
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.234"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            93..350
                     /locus_tag="OQQ26_004267"
     CDS             93..350
                     /locus_tag="OQQ26_004267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
                     /protein_id="HCS1859492.1"
                     /translation="MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIP
                     LSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ"
     gene            complement(400..1350)
                     /gene="uspE"
                     /locus_tag="OQQ26_004268"
     CDS             complement(400..1350)
                     /gene="uspE"
                     /locus_tag="OQQ26_004268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HCS1859493.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ
                     EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYN
                     DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
                     SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD"
     gene            complement(1502..2254)
                     /gene="fnr"
                     /locus_tag="OQQ26_004269"
     CDS             complement(1502..2254)
                     /gene="fnr"
                     /locus_tag="OQQ26_004269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HCS1859494.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
     gene            complement(2449..2964)
                     /gene="ogt"
                     /locus_tag="OQQ26_004270"
     CDS             complement(2449..2964)
                     /gene="ogt"
                     /locus_tag="OQQ26_004270"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HCS1859495.1"
                     /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
                     HYRKEGYERISATNPGGLSDKLRDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
                     GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            complement(2975..>4189)
                     /gene="abgT"
                     /locus_tag="OQQ26_004271"
     CDS             complement(2975..>4189)
                     /gene="abgT"
                     /locus_tag="OQQ26_004271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
                     /protein_id="HCS1859496.1"
                     /translation="ERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIM
                     PPMGALIFLAVGRHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQM
                     HVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRI
                     AGVVSLLFIAAIALMVIPENGILRDPINHTVMPSPFIKGIVPLIILFFFVISLAYGIA
                     TRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESS
                     GLSSIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIAD
                     SSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVG
                     LPIGPGIYPRLS"
BASE COUNT         1115 a         1023 c         1016 g         1035 t
ORIGIN      
        1 aagaggtgag gttttcagag cagacaacgg tgaaatgtca tggtattgtt acgtttaggt
       61 aacaagaaat ttgtctgcac aaggattaca tcatgattat ggcgaaactg aagtcagcga
      121 aagggaagaa atttctcttt ggtttgttgg cggttttcat tattgcggcg tcggttgtga
      181 ctcgcgcgac tatcggcggc gttatagaac agtacaatat tccgctgtct gagtggacga
      241 catcaatgta tgtgattcag tcatcgatga tttttgttta tagcctggtc tttactgtgt
      301 tgctggcaat cccgttggga atttatttcc ttggcggcga agagcagtaa gtaaaaaata
      361 ggcccgataa ctcgggcctt gtcagttatt gaagagtcgt taatcgtctt cttcgtcatc
      421 cagttcaacg ggtgtctgat actggtcagg tttaatgacc aacagatcgc agcgaagatg
      481 atcaatcacc tgttccgccg tgttgccgag gaatgctgct gaaataccgg tgcgtcctac
      541 cgtgcccaga accacaatcc ccgcctgtaa gtgctccgcc aaatcaggaa tcacctcttc
      601 tggcagacct ttttctacgt gcgtcatgtt ttcattaatg ccgaatttct gccgcagagc
      661 tttcattgcc agcaaatgtt gcccacgaat ggcatcgtta taaacgctcg gatcaaattc
      721 cggcagttca atcgcgatat taattggcgt tactgggtaa gcgccaacca gatgaacttc
      781 ggtatggttg acttgttctg ccagttcgat cgtctctttg accagttttt cattgagcgc
      841 attatgatac ggctcttcac tggcgagatt caccgccacc agcgccttac ctccttccgg
      901 ccacggctgg tctttcacca tccacaccgg gcttgggcat ttgcgtaaca gatgccagtc
      961 cgttggcgta aaaatcaccg cttccagacg gtcatgttgg tgcgccattt ttagcaccaa
     1021 atcgtgcccg ccgctgatca cttcctgaat gatggcttcg aaaggacggt tatgccagac
     1081 cactttaatt tcaatgggaa cgccagcatt gagataatat tttgcctgct cgtggatcca
     1141 ggctgtacgc tggctgatga cgccctgacg catagcggta cgttcgtccg gggagagcag
     1201 ggtggtcatt tcgtatgaga agtcatagat cggcaaaaag gctttaattt tgccaccaat
     1261 ccgttgatgt aaataaacag ctcgccgcaa tgctggttgg tcgtcctggt taggatcgat
     1321 aacaacgagc atgttctgat acatagccat acagggtctc cttacaacaa ctgtcaacgc
     1381 agtttgtaat taaaagatta acccatatct ggtgaatgaa acagtgatga atcttctgcc
     1441 agatcaataa atcagaaaaa tttaatgata tgacagaagg atagtgagtt atgcggaaaa
     1501 atcaggcaac gttacgcgta tgaccagcaa gctgggccag cgcatcgtta ttttcgatgg
     1561 tgatgtattt acctttgact gccagcatgc cgcttttctg gaagcgaccc agcagacggc
     1621 tgatggtttc taccgtcagg cccagatagt taccgatatc gccacgagtc atcgtcaggc
     1681 ggaattcacg aggggagaag ccgcgttggg caaaacgacg ggacaggttg tagatgaatg
     1741 cagccagacg ttcctcggca tttttcttcg acaacagcaa gatcatgtcc tgatcgcctt
     1801 tgatttcacc gctcatcaga cgcatcatct gctgacgcag attcggcatt ttaccggaca
     1861 aatcgtccag cgtttcgaac gggatttcgc ataccatcga ggtttccagc gcctgagcga
     1921 agctcgggtg atggccgctg ccgatggcgt caaatcccac caagtcgcca gctaaatgga
     1981 aaccagtgat ttgctcgtcg ccttgctcag tgatggtata acttttaatc gtaccggagc
     2041 ggatggcata aagcgattta agttcatcac cagccttaaa cagcgtctgg cctttctgaa
     2101 taggcttctt ccgctcaatg atattatcaa gctgatcaag ctcatgttcg ttgagtgtga
     2161 acgggatgca aagctggctg atgctgcaat cctggcaatg gatagcacaa ccgccagact
     2221 gaatgcgccg tataattcgc ttttccggga tcataggtct gctcaagccg taattgatat
     2281 ttgtcaattt taacatcttt ttagggagca agtaagtcta agcaaacctt aacagcagag
     2341 aattccgata ttagatgtaa atatatgtct atctatttga aaacccttaa gttgttaagg
     2401 gtaactttac ataaaagtgt gaacaagctg gcacaaattg tttaatgttt acagcaaaag
     2461 ataaccttcg tggcgcaata accactcttt tcgctgaact ccgcctgcat atccggtcat
     2521 ggtgccgttt cggccaataa cccgatggca aggtacgacg atgctgatgg gattcgatcc
     2581 gtttgccgca ccaacggcac gcgccgcgcc agggcggccc aattgttcag ccagttggcc
     2641 gtaatgcatt acctgcccgc aggggatagt gcgtagagtt ttccagactt cgcgctgaaa
     2701 tggcgtcccc cctgtggcag tgggaagcgt atcaataatg ctaagattac cggcaaaata
     2761 atcacgaagc ttgtcgctta aaccgcctgg gttggtggca gaaatgcgct catagccttc
     2821 tttgcgataa tggatgtcca gcagctgcac catgcgttcg ctgtactctt cccattcaac
     2881 cgcccgcagg cgaaattgct catcgcaaat cacccacagt ggacccagtg gcgtggcaat
     2941 tttttcttca agtaatctca gcatccgttc tctcttaaga caaacgtggg taaatccccg
     3001 gacctatcgg cagaccaaca agataccacg ccagcaacat cagcagccat accaccaaaa
     3061 agatcagcgg atagggcaag actaacgaat agtaagtacc cagtttcgcg tctggtttgt
     3121 agcgttgcag gaatccaaga aacagtggaa caaaaggaga taccggcgct aaaggcaata
     3181 cggatgagtc ggcaatacga aagaggattt gcgcaaatgc cgggtgaaag ccaagtagca
     3241 taaacattgg tacgaaaatg ggggccagaa tcgaccagat tgcggaaccg ctggcaataa
     3301 acatgcataa gaaagaggaa agcaacgcca gaccgacaaa cgccgggatg ctgctaagcc
     3361 ctgaactttc aagtatatcg gtcagcccca cggcgatgaa tttccccatg ttgctccagt
     3421 taaacatggc gacaaactgg gcgaggggaa aaaccatcac gataaatccc gccatctctt
     3481 tcatcggttc aatcattaaa tgcggtaaat ccgcctgacg tcgaattgtg cgggtagcga
     3541 tgccataagc cagcgagata acaaagaaaa aaagaatgat cagtggcacg atacctttaa
     3601 taaagggtga tggcatcacg gtgtgattaa tcggatcgcg caatatcccg ttttccggga
     3661 tcaccatcag cgcgatcgca gcaataaaaa gtagcgatac gacacctgct atgcgtaaac
     3721 caaaacgctg actttcggtc aatgtctgca gtttctcatc gctgtttccc tgccattgac
     3781 ctaaccgtgg ttcgatgatt ttgtcggtta tcaggccgcc aacaatcgtc agtacgacta
     3841 cggagctggc cataaaatac cagttatcaa ttacactgac gtgcatttgc ggattgaacg
     3901 cagccgccgc ttccgtgctg atccccgaca gcaacacgtc ggttgtgaca atcagtaaat
     3961 tagccgtgaa gccgcagcct acgcctgcaa tggcggccag taaacctgca actggatgcc
     4021 tgcccaccgc cagaaaaatc agcgcaccca tcggtggcat gatcactaac gccgcatcgg
     4081 aagaaatgtg gctgaaaaaa gcaataaaca gcaccatata actggcgtag cgggcattaa
     4141 catgcgatgc cattttaacc attagcgctg gcagtaagcc gacgcgctc
//
LOCUS       DAJVTL010000233         4166 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.235, whole genome shotgun sequence.
ACCESSION   DAJVTL010000233 DAJVTL010000000
VERSION     DAJVTL010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.235"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            199..660
                     /locus_tag="OQQ26_004272"
     CDS             199..660
                     /locus_tag="OQQ26_004272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416627.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HCS1859497.1"
                     /translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT
                     YVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLGPLSAKYKNIAGVEEKLTYTDTYA
                     QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK"
     gene            complement(701..1171)
                     /locus_tag="OQQ26_004273"
     CDS             complement(701..1171)
                     /locus_tag="OQQ26_004273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HCS1859498.1"
                     /translation="MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE
                     DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD
                     DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS"
     gene            complement(1218..1937)
                     /gene="yehT"
                     /locus_tag="OQQ26_004274"
     CDS             complement(1218..1937)
                     /gene="yehT"
                     /locus_tag="OQQ26_004274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310963.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HCS1859499.1"
                     /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH
                     KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
                     SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKSLKEAIGL"
     gene            complement(1934..3619)
                     /gene="btsS"
                     /locus_tag="OQQ26_004275"
     CDS             complement(1934..3619)
                     /gene="btsS"
                     /locus_tag="OQQ26_004275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulatory system sensor histidine
                     kinase BtsS"
                     /protein_id="HCS1859500.1"
                     /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
                     LCYIVFSIFCIMGTWFGVHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
                     IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
                     NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
                     GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA"
     gene            3841..3906
                     /locus_tag="OQQ26_004276"
                     /pseudo
     CDS             3841..3906
                     /locus_tag="OQQ26_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
BASE COUNT         1125 a         1054 c          947 g         1040 t
ORIGIN      
        1 cacgggtaga agcaatgaat aacggtgttt tgctttgcga acaattattc cccatgcttc
       61 aacaacaagg atgaaatagt gctttttact aagagttcta ctccagttcc ggactgctca
      121 cgccacggta ttaggcatat cctatatagc ccctggtgag agtcaccagt ttcttgatta
      181 aataaaatgg agttttacat gaaggctttc aataagctgt tttccctcgt tgttgcatct
      241 gttctggttt tctctcttgc tggctgcggt gacaaagaag aatcgaagaa attcagcgcc
      301 aatctgaacg gcactgaaat tgccattacc tatgtctaca aaggtgacaa ggtgcttaag
      361 caatcttctg aaaccaaaat tcaatttgcc tccattggtg caaccaccaa agaagatgct
      421 gccaagacac ttgggccgtt aagcgccaaa tacaaaaaca tcgcgggtgt tgaagaaaaa
      481 ttaacctata ccgataccta cgcgcaggaa aacgtgacta tcgatatgga aaaagtggat
      541 tttaaagccc tgcagggtat ttcaggaatc aacgtttctg ctgaagatgc caaaaaaggt
      601 atcactatgg cgcaaatgga actggtgatg aaagccgctg gttttaaaga agtgaaataa
      661 tctgtcggcg gccatgtttc gcatggccgc catacccgtc ttagcttttc ttcacatgct
      721 ggcgcgctgc cagtccacgc agaaaataac gtaaaaattg atcgccgcat tcgcggaagt
      781 ttttatgatc cggtgcgcgc atcatcgctg taatttccgg catcgaaacg cggaactgct
      841 gttcggtgag gatcgccaga atgtcatcgg ttttcagcga aaacgcgatg cgtaattttt
      901 tcagcacgat gttgttatta atgcgacgtt ccggctccag tgccggagca gactcatcct
      961 tgccgcgttt ttcataaatc aggccattga ggaatgacga caaaacaatg tccggacaac
     1021 gctgaaaacc ctcttcgtct tctttacgta gccagacggc gatctgttcc gcggtggctt
     1081 cgacattacc cagcgccaga atacgcacca ggtcattatt attggctttc aaaatgtagc
     1141 gcacgctgcg cagaatatcg ttacttagca tgaggccttc aggtgttgat gaggcaaaaa
     1201 gccattttag cagtctttta caggccaatc gcctctttta agcttttcag ataacggcgg
     1261 ctgaccggca cggttaagcc attacgcaaa atcaactcgg cctggccgtt atcttccaga
     1321 cgaatctcct gtaaatgcgc gaggttaacc agatactgac gatggcagcg cagtagtggt
     1381 gtacgacttt ccagggtacg taatgtcaat tcggtaaagc cctctttccc ttcgtggctg
     1441 gtaacgtaga caccgctcat ccgactgctg acaaatgcca catctttcat ttgcagcaaa
     1501 taaatccgac tatgccccgt acaagggata aatttcagcg cctgttgatt ttccggtaac
     1561 agcgaaacat cctgcttgct gcgctcctga cgcaatcgcg ccagcgtttt ctccagtcgc
     1621 gcttcatcaa ttggcttcag cagataatca aaggcatgtt cttcaaaggc tttaatagcg
     1681 tattcgtcaa acgcagtgag aaaaacaata tacgggcgat gttccgggtc aagcatcccc
     1741 accatttcca gaccactgat gcgcggcatc tggatatcga gaaacagcac atccgggcgc
     1801 agtttatgca ccgcgccgat cccttccacg gcgtttgaac actctccaac gatttcaata
     1861 tcgctctgct cctgcaaaaa tacacgcagg ttctcccgtg ctaacggttc atcatcgaca
     1921 attaagactt taatcatgcc tcgtccctcc atggtagtcg taacgttatt cgggtgtaac
     1981 tatcaggctc acaggcgacg cttattccat agtcatcgcc aaaccgttca cgtaaacgct
     2041 tatccaccag attcatcccc agcccactgg cattggttac cggttgatac aaaccggcat
     2101 tgtcttcgat ctccagcatc aaatgttgcc cctcacgtcg ggcgctgatt gccactcgcc
     2161 ctgtatccag cagttgtgat gtcccatgtt taatggcgtt ttccactatc ggttgcaggg
     2221 taaacgcggg caattgctgc tgggataatt cttgcggaat agcaatgttg acctgcaacc
     2281 gcgactggaa gcgcgccttt tcaatttgca gataagcgtt cacatgttca atttcgtcgg
     2341 cgagagtaac aaactccgaa ggccgcttta agtttttgcg gaaaaaagtg gaaagatact
     2401 gcaccagctg gctggcctgt tcgctgtcgc ggcggatcac cgctttaatg gtgttaagcg
     2461 cattaaacaa aaaatgagga ttcacctggg cgtgaagcag tttgatttct gactgggtga
     2521 gcatcgcttt ttgccgctca tattgcccgg caagaatctg cgccgaaagc agttgcgcaa
     2581 tcccctcgcc cagcgtacgg tttattgaac tgaataaacg gtttttggct tcatacaatt
     2641 tgatggtgcc catcacgcgc tgattttcgc cacgcaacgg aattaccagc gtcgacccca
     2701 gtttgcattg cggatgcaaa gagcaacgat aaggtacttc gttgccatca gcgtagacca
     2761 cttcaccggt ttcaatcgct tttaaggtgt aagtcgaaga aatcggtttg ccgggtaaat
     2821 ggtggtcgtc accaattccg gtaaaggcca gcaatttctc tcgatcggta atcgcgactg
     2881 caccaatatc cagctcctga tacagcacct gagccacttt catgctgttc acttcgttaa
     2941 acccttgtcg caaaatgcct tccgtcgagg ctgccacttt cagcgcagtg gcagaaaaag
     3001 ccgaagtgta tttttcaaac atcgcgcgtt tatcgagcaa tatacgcata aacagcgccg
     3061 cgccgacggt attggtgacc atcattggcg cagcaatatt actcaccaga cgcaccgcat
     3121 cttcataagg tcgggcgatc gcaaggatga tcagcatttg caccatttca gcgacgaacg
     3181 tgacggcacc ggcggtaatg gggttaaaga ctttatcagt gcgcccgcga cggatcagga
     3241 tgctgtgtac caggccgccg agcaatcctt caacgatggt tgagatcatg caacttagcg
     3301 cggtcatgcc ccccatcgaa tatcgatgta agccgccggt cagaccaacc agcccaccga
     3361 cgaccggacc gccgagtaag ccgcccatta ccgcgcctat cgcacgggta ttggcaatag
     3421 aatcgtcaat gtgcacccca aaccaggtgc ccatgatgca gaagatggaa aagacgatgt
     3481 agcagagaaa tttatgcggc agacgaaccg tgacctgcat taacggtatg aataatggcg
     3541 ttttactcat taaccacgca atgactaaaa aaacgcacat ctgctgaagc agcagcaaca
     3601 ccagattaaa atcgtacata cccgcaaacc acacttccct ttaaaacgcg taacatacat
     3661 tgcctgcgtt taactttctt tgaactcttg cagaaaaatg agaattcgtg agtacgatca
     3721 ctcaaaatcg cctggcaaaa ataaaatcac cctatagatg cacaaaaaac gggcaaaact
     3781 acctggttcg caaaactgcg tctaaagtta aaccgggacc tcgcgagcaa gggtgagacg
     3841 atggcgcttt acacaattgg tgaagtggcg ttgctttgtg atattaatcc tgtcacgtta
     3901 cgcgcgtgac gcaacatttt taaaaatcga cgaagatcgt ccagaagcgc cgtttttcaa
     3961 gggttggata gatgattcgt ttaccatgtc gacgaacttc gacgaatttc gccgataaaa
     4021 agtgtcccat acatgcccca ttgatgcccc ataaacaata tcaggaattg acactggtta
     4081 tccatacaga taaaaataac acctgtacat aactacagtt acaggagggt gttatgcgtg
     4141 ttgagatctg tatcgctaaa gaaaaa
//
LOCUS       DAJVTL010000234         4164 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.236, whole genome shotgun sequence.
ACCESSION   DAJVTL010000234 DAJVTL010000000
VERSION     DAJVTL010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4164
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.236"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            61..216
                     /locus_tag="OQQ26_004277"
     CDS             61..216
                     /locus_tag="OQQ26_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 family protein"
                     /protein_id="HCS1859501.1"
                     /translation="MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTESGARRW
                     LERNSGG"
     gene            376..594
                     /locus_tag="OQQ26_004278"
     CDS             376..594
                     /locus_tag="OQQ26_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859502.1"
                     /translation="MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAE
                     NLSALEQDITNLEKAAALSIARMITYPR"
     gene            1163..1351
                     /gene="dicB"
                     /locus_tag="OQQ26_004279"
                     /gene_synonym="ftsT"
     CDS             1163..1351
                     /gene="dicB"
                     /locus_tag="OQQ26_004279"
                     /gene_synonym="ftsT"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000854559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibition protein DicB"
                     /protein_id="HCS1859503.1"
                     /translation="MKTLLPNVNTSEGCFEIGVTISNPVFTEEAINKRKHERELLNKV
                     CIVSMLARLRLMPKGCAQ"
     gene            1348..1539
                     /locus_tag="OQQ26_004280"
     CDS             1348..1539
                     /locus_tag="OQQ26_004280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001070259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1482 family protein"
                     /protein_id="HCS1859504.1"
                     /translation="MNPVFALILTVFLVSGEPVDIAVSVHRTMQECMAAATEQKIPGN
                     CYPVDKVIHQDNNEIPAGF"
     gene            1633..4074
                     /locus_tag="OQQ26_004281"
     CDS             1633..4074
                     /locus_tag="OQQ26_004281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease"
                     /protein_id="HCS1859505.1"
                     /translation="MSTDKEEFALYCEAKNVKVRKRLGIKGGFYWTTAKKLSVAISRC
                     ITAMDDNDYDEDDFKKPVRVNLPVVDDLPPEGVFDTEFCNRYEKGGKDGITMTFIGPS
                     PSVQDKSASTDNTNINGEDMTEIEESMLLPVSGQELPIRWLAQHGSEKPVTHVSRDEL
                     QALHIARAEELPAVTALAISHKTSLLDSLEIRDLHKLVRDTDKVFPNPGNSDLGLITA
                     FFEAYLDADYTDRGLLTKEWMKGNRVSRITRTASGANAGGGNKTDRNPNLVHTLDTLD
                     VEIAAATLPMDFNIYEIPGSVYRRAKEVVLKKESPFKEWSAALRATPGILDYSRAAIF
                     ALILSAPPEFYHYPGRLQGYINAYLTETDHENPSKETLTAARHTPEKDILEEINREVV
                     TERETEEEKPQPSDAMAGEQATTETMEPDTTEHCQNAQSLDAQSQVSSANQVKVTADE
                     VNKIMQAANISQPDADKLLAVSRGEFVEGISDPNDPKWVKGIQTRDSVNQNQHESERN
                     DQKAEQNSPNALQNEPETKQSEPVAQQEPEKVCTACGQSGGGNYPDCGAVMDDATYQK
                     TFDEENQVEVQENDPEEMEGAEHPHKENAGSAQDHASDSKTGETADPLITVNGHHEIT
                     STSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDR
                     DTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTIL
                     RRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKY
                     VSAIWQKLIPSQADF"
BASE COUNT         1236 a          968 c         1011 g          949 t
ORIGIN      
        1 aataactatg cagcaggttt ttgttccgct accccggcgt taaggggaaa tgaggtcagc
       61 atggatacta tcgatcttgg caacaacgaa tctctggtgt acggcgtgtt tcccaaccag
      121 gacggcacct tcaccgcaat gacgtatacc aaaagcaaaa cgtttaaaac cgaatctgga
      181 gcgcgtcgct ggctggaaag aaattcaggt gggtgatatg gatttcgaca caatcatgga
      241 aaaggcttac gaagaatact tcgaaggcct tgccgaaggc gaagaagctc tcagcttcag
      301 cgaatttaaa caggcgcttt ccagttcggc aaaatctaac ggctgataag cgaaacagca
      361 ccgcgaggaa tcagcgtgca gaaacgagaa cccgtcatca tcgcgccaga ctataccgat
      421 gatgaacttt atgagtggat gcgccagaaa attaatgcag cgcaggatct gaaatgggct
      481 aatgaagcca gggctaagca ggctgaaaat ctgtccgctc tggagcagga tatcaccaat
      541 ctggaaaaag cagcggcatt aagcattgcc agaatgatta catacccgcg ttagtagcta
      601 atcaacaaag ctaaggttag taattaagga gttctccacg ggtgaggtgg agtgcgtgcg
      661 ccggacacgg gtgagcatcc ggcactgaca gtttactgaa aggatatttc cctgaaaagt
      721 cagaccataa cgcgaaagcg cacggcgagg tagctggttc atagatagcc tgtcgttaaa
      781 ttttcgtcga ccgtgcgctt ccggttgtgg caatccgcga aatggcgcgg cggtaagtat
      841 ggcggggtta ttccttcccc cgttgaggac accgggttgt caggttgacc atacgcttaa
      901 gtgacaaccc cgctgcaacg ccctctgtta tcaattttct ggtgacgttt ggcggtatca
      961 gttttactcc gtgactgctc tgccgccctt tttaaagtga attttgtgat gcggtgaatg
     1021 cggctaagcg cacgcggaac agttaaaacc aaaaacagtg ttatgggtgg attctctgta
     1081 tccggcgtta attgttaact ggttaacgtc acctggaggc accaggcacc gcatcacaaa
     1141 actcattgtt gagggcgcga taatgaaaac gttattacca aacgttaata cgtctgaagg
     1201 ttgttttgaa attggtgtca ctatcagtaa tcctgtattt actgaagagg ccattaacaa
     1261 aagaaaacac gaacgggagt tattaaataa agtatgcatt gtttcaatgc tggcccgttt
     1321 acgtctgatg ccaaaaggat gtgcacaatg aatccagtat ttgcacttat tctgacggtt
     1381 tttcttgttt ccggagagcc agttgatatt gcagtcagtg ttcacagaac aatgcaggaa
     1441 tgtatggcag cagcaaccga acagaaaatt ccaggcaact gttatccggt cgataaagtt
     1501 attcaccagg ataataacga aatcccggca ggattttaaa acagcaccgt aataaatatc
     1561 cagtttcatt cttatatgtc agcaatggca gagatttgtt cacccttaaa tctgtgatga
     1621 ggtttatcaa taatgagcac tgataaagaa gaatttgcac tatattgcga agcaaaaaat
     1681 gtcaaagtaa gaaaacgcct aggaattaaa ggtggttttt actggactac agcaaaaaaa
     1741 ttatctgttg caatctcccg ctgcattacc gcaatggatg acaacgatta tgatgaagac
     1801 gactttaaaa aacccgtccg cgtcaatttg cccgttgttg acgaccttcc gccagaaggc
     1861 gtgtttgata ctgaattctg caaccgctat gaaaaaggcg ggaaagatgg catcacaatg
     1921 acatttatcg gcccttcccc ctctgttcag gacaaatcag ccagcactga taataccaac
     1981 atcaacggcg aagacatgac tgagattgag gagagcatgc ttctacctgt ctccggtcag
     2041 gaactgccca ttcgttggct tgctcaacac ggcagcgaaa aaccagtaac gcacgtttca
     2101 cgcgacgaac tccaggcatt acacattgca cgggctgaag aactaccggc tgttactgcc
     2161 ctggctattt cgcataaaac cagtctgctc gactcgctgg agattcgcga cctccacaaa
     2221 ctggttcgtg acactgacaa agttttccct aatcctggta attcagacct gggactaata
     2281 actgcttttt tcgaagcata cctggacgct gactacactg atcggggtct gctgacaaaa
     2341 gagtggatga aaggaaatcg tgtttcacgc atcacccgca cggcttccgg tgctaatgct
     2401 ggcggtggga acaaaaccga tcgcaatccg aatttagtac acaccctcga cacactggat
     2461 gtggagattg cagcagccac acttccgatg gattttaata tttatgaaat tccgggcagc
     2521 gtttatcgtc gcgcaaaaga agtagtcctg aaaaaagaaa gtccgttcaa agaatggtcc
     2581 gcagcacttc gtgcaacccc gggtattctg gactattccc gcgccgctat ttttgcactt
     2641 atcctaagcg caccccctga attttatcac tacccgggac gccttcaggg gtatatcaac
     2701 gcctatttga cagaaactga tcacgagaac cccagcaagg aaactctcac agctgcccgg
     2761 catacgccgg aaaaagatat cctggaagaa attaaccgcg aggtggttac tgagcgtgaa
     2821 acagaagaag aaaaaccaca accatctgac gcaatggcag gtgaacaggc aacaactgaa
     2881 acaatggaac cggatacaac tgaacattgc cagaacgcgc agtcgctgga tgctcagtcg
     2941 caggtgagtt ccgctaacca agtaaaagtc accgctgacg aagtaaacaa aattatgcag
     3001 gcagccaata tcagccagcc tgacgccgat aagttacttg ctgtatcgcg tggtgaattt
     3061 gttgagggga ttagcgaccc taatgatccg aaatgggtca aggggatcca gactcgcgat
     3121 tctgtgaacc agaaccagca tgaatcggaa cggaacgacc aaaaagcgga acaaaacagc
     3181 ccaaatgcgt tacaaaacga gccagaaacg aaacaatccg aaccagtagc gcaacaggaa
     3241 ccggaaaaag tctgcaccgc ctgcggtcag agcggtggcg gcaactaccc tgattgtggc
     3301 gcggtgatgg acgacgcaac ataccagaaa acattcgatg aagagaatca ggttgaagtt
     3361 caggaaaatg atccggagga aatggaaggc gctgaacatc cacacaagga gaatgctggc
     3421 agcgctcagg accacgccag cgatagtaaa actggcgaga cggcagatcc cttaattacg
     3481 gtgaatggtc atcacgaaat cacatccacc agcaggacgt gtgaccatct aatgatcgac
     3541 cttgaaacca tgggaaaaaa tcctgatgcc ccgatcatct caataggtgc aatatttttc
     3601 gatccgcaaa ccggagatat gggacccgaa tttagtaaga ctatcgatct ggaaactgct
     3661 ggcggagtca ttgatcggga caccattaaa tggtggctta agcaatcacg cgaagcgcaa
     3721 tctgccatta tgaccgatga aatcccgtta gatgatgcac tgttacaatt gcgggaattt
     3781 atcgacgaaa actccggtga attttttgtt caggtctggg gaaatggagc caacttcgac
     3841 aacacgattt tgcgccgttc atacgaacgg caggggatcc cctgcccgtg gcgttactac
     3901 aacgatcgcg atgtacgcac aatcgttgag ctggggaaag ccatagactt cgatgccaga
     3961 acggctattc cattcgaagg tgagcgccat aatgcacttg atgacgctcg ttaccaggca
     4021 aaatacgttt cagctatctg gcaaaaactg atcccgagtc aggctgattt ttaatgttca
     4081 accctaattg ccgctaacac gtatatagtt agcggcggtt atgagatata gctatgagca
     4141 gcttattttt aaccgaagat gaat
//
LOCUS       DAJVTL010000235         4157 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.237, whole genome shotgun sequence.
ACCESSION   DAJVTL010000235 DAJVTL010000000
VERSION     DAJVTL010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4157
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.237"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            279..1148
                     /locus_tag="OQQ26_004282"
     CDS             279..1148
                     /locus_tag="OQQ26_004282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000122181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859506.1"
                     /translation="MSYRQRKITVEFTLSDGRTFGNGQGNMLTITDASCFASIAVYGG
                     VAGTQITLYIWGMSPAHMTNLSWRGVWRQEQSTANKMRLWADGRLIFEGDITDAYADY
                     NQAPDIPLILTGQIHFNLRNQPAADFSAKGDVAVADIIRALASTVGLGFENQGVSRSL
                     SDPHFSGNVVQQMLDVASAADINIDLGNVEKVTIWPKGQNRNIPPVLISPDHGLTGYP
                     VYTMTGLSATTIFCPDLFTGRPAHLESSLPDMTGDYTITGVIHTITSRTVGGPWSSNC
                     TMMRAEENGTTTQ"
     gene            1129..1806
                     /locus_tag="OQQ26_004283"
     CDS             1129..1806
                     /locus_tag="OQQ26_004283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001534334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HCS1859507.1"
                     /translation="MAQPLSNPTDVNSEINAQDFMLRQFLGRHAFITLGRVVAVEEGF
                     IEARPMVMGVAADGSPVEHEVIYNIPVWRLQGGGNAVIMPPHVGDIGFLAICDRDISA
                     VKATRQAAMPGSKRTHNYADAIWLGGVLNGDPVQFVVFDDNQIRIVSPWKVEISAPEG
                     VINAPKSFTVNSPQIALNGDTAVSKGLNVTGQSRLSGGSNIGGIDFGNHVHGGVESGG
                     STTQGPR"
     gene            1819..2175
                     /locus_tag="OQQ26_004284"
     CDS             1819..2175
                     /locus_tag="OQQ26_004284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001191864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859508.1"
                     /translation="MQSRSLLLDTGTWDILLDDTGNLAITDNPHAVAQDVACACSTFL
                     GECWYDSTAGIPYWPRILGHWPGTQLVNATLQQEALKLPTVSAAVCQVTTDQTRTVTG
                     VLRITDTNNDIFTVLL"
     gene            2172..3409
                     /locus_tag="OQQ26_004285"
                     /pseudo
     CDS             2172..3409
                     /locus_tag="OQQ26_004285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748481.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
     gene            3411..4016
                     /locus_tag="OQQ26_004286"
     CDS             3411..4016
                     /locus_tag="OQQ26_004286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2612 domain-containing protein"
                     /protein_id="HCS1859509.1"
                     /translation="MQNVAATVLAQYAASSRLNALINSFNAALSPDSFISDFYGLIWN
                     IDTAEKYGLDVWGKIVGVSRRLTVKDDFNYLGFSESRMDTPVMDDSRPFNQAPFYNGK
                     SVTRTVDLTDAIYRRLILMKAMSNITDCSVPDINRMLRFMFGKKRRAYVLNNGGLRMS
                     YVFESALSSAELAIIQSSGALPSPPGVYVSVVLKESRNEGQ"
BASE COUNT          975 a         1013 c         1173 g          996 t
ORIGIN      
        1 ccctggaact tctcgtctgt aaaataatcc ttacgctacg tacttctcgg ggcgcttacg
       61 aatcagcgta ctacggggat gtatatcgat atcattgtta atggtgaacc gtgcctgtat
      121 ggcgtgctgt gtctgaataa taaccggatt gtccggtacg gatacctgcc gtttcagggg
      181 gacctgtttt ttaccgacac ggaggggaat agtgaccctg actggcgggg gctcggatcc
      241 cggtaccggc tctactggct gttacctgag gaactgatat gagctacaga caacgtaaaa
      301 taacggtgga gttcactctt tcagacggac gaacgtttgg taatggccag ggcaatatgc
      361 tgaccattac cgacgcaagc tgttttgcca gtattgccgt atatggaggg gtggctggta
      421 cacaaatcac gctgtatatc tggggaatgt caccggcgca tatgacgaat ttaagctggc
      481 gcggtgtgtg gcgacaggag cagagtaccg caaataaaat gcggctgtgg gccgacgggc
      541 ggcttatttt tgaaggtgat attactgatg catacgccga ctacaaccag gcgccggata
      601 ttccgctcat tctgacagga cagattcatt ttaatctgcg taatcagccg gcggcagatt
      661 tcagcgcaaa gggcgatgtt gcggttgcag atattatccg tgcgctggcg tcaactgtcg
      721 ggcttggatt tgaaaaccag ggggtcagcc gcagtctgtc tgacccgcat ttttccggta
      781 atgttgtaca acaaatgctg gatgtcgctt cagccgccga tattaacatt gatctgggga
      841 atgtggagaa agtcaccatc tggccgaaag ggcagaaccg gaatattccg ccggtactga
      901 tttcgccgga tcacggactg actggctatc cggtttacac catgaccgga ctcagcgcca
      961 ccacgatatt ctgccccgat ctctttactg gcaggccagc gcatctggaa tcgtcactgc
     1021 ctgatatgac gggcgattat acgatcacag gggtgataca caccattact tcgcgaaccg
     1081 tgggcggtcc gtggagttcc aactgtacca tgatgagggc tgaagaaaat ggcacaacca
     1141 ctcagtaacc cgacagacgt gaacagcgaa atcaatgcac aggactttat gctgcggcag
     1201 tttctcggac gtcatgcgtt tatcactctg ggacgggtgg tagccgtgga agagggattt
     1261 attgaggccc gaccgatggt aatgggcgtt gcagcagacg gttccccggt tgaacatgag
     1321 gtgatttata acattcccgt atggcgacta caggggggcg gtaatgcggt gattatgccg
     1381 ccacatgtgg gggatatcgg ttttcttgcc atctgcgatc gggatatcag tgcggtaaaa
     1441 gccacgcgtc aggctgcgat gccgggatca aagcgtaccc ataattatgc tgatgccatc
     1501 tggctgggtg gcgtgctcaa cggtgatccc gtccagtttg tggtatttga tgacaaccag
     1561 atacggattg tatctccctg gaaagtggag atatccgcgc ctgagggtgt gattaatgcg
     1621 ccgaaaagct tcaccgttaa ctcaccacaa attgcgctga acggcgatac cgccgtcagt
     1681 aaggggctta acgttaccgg gcagtccagg ctttccggcg gttcgaacat cgggggtatt
     1741 gattttggaa accacgttca cggcggcgtt gagtccggcg gctcaaccac gcagggaccc
     1801 cggtaaacag gagaaaacat gcagtcacga tcacttcttc ttgacaccgg gacatgggat
     1861 atcctgcttg atgataccgg aaatcttgcc attactgata atccccatgc ggtagctcag
     1921 gatgtggcgt gtgcgtgcag tacttttctg ggggagtgct ggtacgactc aacggctggc
     1981 ataccttact ggccacgcat cctcggacac tggcccggca cacaactggt gaatgccact
     2041 ctgcaacagg aagcacttaa actgccgacc gtgagcgccg ctgtctgcca ggtcacaact
     2101 gatcaaaccc ggacagtaac aggtgtgctg cgtattacag ataccaataa tgacattttt
     2161 acggtactgc tatgagtgaa aataaatctt tttctaccgc agtgcccgct gtacagattt
     2221 cggatagcgg gctgaatgtg ccggatgaag cggatattct gagcggcagg cttgctgatt
     2281 tttcggcggc gctgggcggg gccatgagta ccagtctgag cagtccgcag ggacaacttg
     2341 catccagcga aagcgccatt attgcggata aaaacgatca gttgctgtat atcgttaacc
     2401 agatcaaccc tgactttttc agtggtcgct ttcaggatgc aataggcagg atttatttcc
     2461 tggagcgccg tggggccaca ggtacgacag taacagcgac ctgtaccggg ctggttggca
     2521 cgctgatccc ggcgagcagt atggcgcagg atgaggccgg ttataagtat gtcagtcaga
     2581 cgtcactatc ggcgcatcag ggcaggttga tgcggtattt ctgaatttgt ccaccggccc
     2641 cgtcggctgt cctgtgggga cgctgaataa aatttataag gcaatacctg gctggtcagg
     2701 tgtcactaac gcccgtgccg gtgtgccggg cagcgatgag gaaacccgtg cggactttga
     2761 aaaccgccga cgtaattcag ttgcccgtaa tgcccggaat attctggaag ccatccgggg
     2821 tgaaatactc tccacggtag aaaacgtggt ggatgtttac gtcacccata atccgaaaaa
     2881 aacagaacaa aaagccggag tcagtcagta tccattaaca cccggttcgc tttatgttgg
     2941 cgtgtacggc ggcagcccgg cagatatcgc ggcggccatc tggcgtaagg ctccgccggg
     3001 tattgatatg aatggcaaca caacgttcac tgttgcagat aaggagtacg atccgccgta
     3061 tcctgaatac gtgatcagct ggcagacact caaacccgtc agtctgcatg tcagtgtgac
     3121 gctgaaaaaa agtgactacc tgccttcaga tattacccga caggtacagc aatccgtgct
     3181 ggacgcattt aatggtacag atggtggtct gcgggcaaga gttgcctctg ttgtctctgc
     3241 cgggcgctac tatgccggca tttacaaaac cgatccggaa catattgata ttctgggcct
     3301 tactgtgagc cgtgacggtt cgtcatggac aacggctgtc actttcggga tagatgagat
     3361 tccggttctg gatgtgtcgg atatcagtgt gaaactccag gaggcataac gtgcagaatg
     3421 tggctgccac tgtgcttgcg cagtatgctg ccagctcccg actcaatgcc ctcattaaca
     3481 gctttaacgc agcgctttcc cccgacagtt ttatcagtga tttttatggt cttatctgga
     3541 acatcgatac cgcagaaaag tatggtcttg atgtctgggg aaagattgtg ggtgtcagtc
     3601 gccggctgac ggtaaaggac gattttaatt acctgggctt cagcgagtcc aggatggaca
     3661 ccccggtaat ggatgattcc cgcccgttta atcaggcacc gttttacaac ggaaaatcgg
     3721 ttacccggac tgttgacctg actgatgcca tataccggcg actgatcctg atgaaagcca
     3781 tgtcgaatat tactgactgt tccgttccgg atattaaccg gatgctgagg tttatgttcg
     3841 gaaaaaaacg ccgggcttat gttctgaata atggcgggct gaggatgagt tacgtctttg
     3901 agtccgcgct ctcgtcggca gaactggcga ttatccagtc gtcgggtgca ctgccgtccc
     3961 cgccgggtgt ttatgtttca gtagttttaa aggagtcccg taatgaaggc cagtgataaa
     4021 ccccgccagc tggcggtccc ctttgcgagt accggagata aaaaccgtat cccggacaag
     4081 gcgacacagc agaccagaga gagcggtaat gctgcgtatg attcaggttt tcctccgacg
     4141 accatgacag cggtctc
//
LOCUS       DAJVTL010000236         4099 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.238, whole genome shotgun sequence.
ACCESSION   DAJVTL010000236 DAJVTL010000000
VERSION     DAJVTL010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4099
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.238"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..344)
                     /locus_tag="OQQ26_004287"
     CDS             complement(<1..344)
                     /locus_tag="OQQ26_004287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HCS1859510.1"
                     /translation="MKLAACFLTLLPGFAVATSWTSPGFPAFSEQGTGTFVSHAQLPK
                     GTRPLRLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPT
                     LMISIQNAAEPVA"
     gene            664..1488
                     /locus_tag="OQQ26_004288"
     CDS             664..1488
                     /locus_tag="OQQ26_004288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HCS1859511.1"
                     /translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
                     NKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
                     ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
     gene            complement(1596..2774)
                     /gene="xylR"
                     /locus_tag="OQQ26_004289"
                     /pseudo
     CDS             complement(1596..2774)
                     /gene="xylR"
                     /locus_tag="OQQ26_004289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312479.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator XylR"
     gene            complement(2852..4033)
                     /gene="xylH"
                     /locus_tag="OQQ26_004290"
     CDS             complement(2852..4033)
                     /gene="xylH"
                     /locus_tag="OQQ26_004290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose ABC transporter permease XylH"
                     /protein_id="HCS1859512.1"
                     /translation="MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFT
                     WTTDGAYLSARNVSNLLHQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICD
                     VWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGT
                     TVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVV
                     GRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLE
                     AARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGG
                     TSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRR
                     S"
     gene            complement(4011..>4099)
                     /locus_tag="OQQ26_004291"
     CDS             complement(4011..>4099)
                     /locus_tag="OQQ26_004291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HCS1859513.1"
                     /translation="NLINHNLTQEQVMEAALRSEHHVEKQSV"
BASE COUNT         1075 a         1022 c         1021 g          981 t
ORIGIN      
        1 gctaccggtt cggcggcgtt ctggatggaa atcatcaatg ttggcgtacc ggagcgggtg
       61 tctatttgca gcgtatattc gccgtccctg aacaatcgcc attgaggcgg cgtgttgcta
      121 caaggttgca gggaaagcat ctgattgagt tttatcgcat ccgcaggctg ccagcactgt
      181 tggtcaaaat ttagccttag tggacgcgta cctttgggca actgcgcgtg gctgacaaat
      241 gttcctgtcc cctgttcgct aaaggcggga aaccccggag aagtccagct ggtggcaacg
      301 gcgaagccag gaaggagtgt cagaaaacag gcggcgagtt tcatggcgga tgagtcctta
      361 ttgctgcgat ttcagacagt ttgccagcga taagccagac aaaactcatc cctgagcggt
      421 aagtccacag gatgagaagc aagggtgagc gatcgcgcgc aaaaaacggc tgaattttgc
      481 gataaccccc acattttctg cgagttagcg ccaatctgaa tcgttaactc gtgacatagt
      541 ttcagatttg gactattcct tggggtgctc ttgacagcta tttttgatat gatttgagat
      601 tcaactctca aatttgtgaa aaatataagg tgttggaatg attaaatccg accaggagac
      661 ctgatgattt tgactcccat acgacgatat ggggcgatga ttcttatgtt actcactctg
      721 gtgttttcga gtgaggtgtt agcgaagacg cacacaacaa cagcgagtca aaagtcccac
      781 ttaactaaag ctagtaataa acaggtaagc agtaaacaag agtattctcg caatagtgca
      841 aagagtagtt cacttcctga tttgcgaaaa tacccttccg gaacaccaag gaaaaaggcg
      901 tttctccgga ccgtaatgcc ttacattacc agccaaaatg cagccattac tgcagaacgt
      961 aactggctga tttcaaaaca gtatcagggc caatggtcac ctgctgagcg tgcgcgtctg
     1021 aaagacatcg ccaaacgcta caaggtgaag tggtctggta atacgcgaaa aatcccgtgg
     1081 aataccttgc ttgaacgcgt agacattatc cctaccagta tggtggcgac gatggctgca
     1141 gcagaaagcg gttggggaac gtcgaagctg gcgcgcaaca ataacaatct gttcggcatg
     1201 aaatgcatga aaggacgttg taccaatgcg ccgggtaaag tgaaagggta ctcacagttt
     1261 agttctgtca aagaatcggt gagcgcctat gtcactaacc tgaatacgca cccggcttac
     1321 tcttcgttcc gtaaatcgcg tgcacagctg cgtaaagcgg atcaggaagt gactgccaca
     1381 gcgatgattc acaagctgaa gggctactcg accaaaggga agagttataa caactacctg
     1441 ttcgcaatgt accaggataa ccaacggtta atcgcggcgc atatgtaatt tcatttcctc
     1501 gagccttatc tgatttgtcg gtcggataag gcttttgctc gcatcaggtg gctgtgctga
     1561 gttccctgat gtgacgccga caattctcat catcgctaca acatgacctc gctatttaca
     1621 tcgcgatact cttttggcgt tgtgtcatat gcttttttaa aaacagagta gaaatattgc
     1681 agcgatggat aaccgcacat ttgcgatatc tcattgatcg acaaggtggt tgaaatcagc
     1741 agactgcgcg ctttctccag cttctcggca tgaatcatgg catggatggt ttcacccacc
     1801 tcttctttaa aacgcttctc aagattggag cgcgagatcc cgaccgcatc cagtacctga
     1861 tccactttaa tccctttaca ggcgtgatta cgaatgtaat gcatggcctg aataacggcg
     1921 ggatcggtca gcgagcgata atctgttgag cgccgttcaa tgacgcgaac tggtgggacc
     1981 aaaattcgct gtagcggcat ttcttcttta tctaataatc gatgcaacag ttttgccgcc
     2041 tgatagccca tttgccgcgc gccctgagcg accgaagaaa gggcgacacg cgacagatag
     2101 cgggtcagtt cttcgttatc gatgccaatc acgcataatt tttccggtac gggaatatgt
     2161 agatgttcac atacttgcag aatatgccgc gctcgggcgt cagtaacggc aataatcccg
     2221 gtttgcggtg gcagcgtttg tagccagtct gccagccgat tttgcgcgtg ttgccagttc
     2281 tctggcgcgg tttctaacct ctgataaacc actccgcgat acttttcttc ggcgacaagc
     2341 tgacgaaatg catattcgcg ctcagtggct caacgtttgc cgcttgattc cggaagacca
     2401 taaaaagcaa agcggttaac gcctttctct tttaaatgca aaaatgcgct ttcaaccagc
     2461 gcatagttat cggtggcaat gtaatgaacg ggtgggtaac tttctgcaag gtgatacgag
     2521 ccgccaaccc caacaatggg gacgtcgaca tcagccagcg cttgctcgat ctgtttgtcg
     2581 tcgaagtcgg caatgacgcc atctcctaac cagtccttga ttttatcaat gcgggcgcgg
     2641 aaatcttctt caatgaaaat atcccattcc gattgtgacg cctgtaaata ttcccctacg
     2701 ccttctacta cctgccggtc ataggcttta ttggcattga acagtaatgt gatgcggtga
     2761 cgtttagtaa acatggttct tttcctgctg aatcatgcaa aaactcaaaa ccggtaatac
     2821 gttaccggct ttgagaaaat ttttatcaaa atcaagaacg gcgtttggtt gcggagtcca
     2881 tccatactgc cagcaacaga atcgcacctt taacgatata ctgccagaag gtcggtacat
     2941 ccatcatact cataccgtta tccagtgaag ccatgatgaa tgcccccatt accgctccag
     3001 ccacgctccc gacgccgcct gccagactgg tgccgccaat cacgcatgct gcaattgcgt
     3061 ccagttcggc gatatttccc gcagaaggtg aaccagcgcc aagtcgagaa ctgaggatta
     3121 atccggcgat ggctaccatt aatccgttaa tcgcgaacac ggcaagtttg gtgcgttcaa
     3181 cgttaatccc ggagagacgt gctgcttcca gattgccgcc gatggcataa atgcgtcgtc
     3241 caaatgccgt ccgcgttgcc ataaacattc cgccgagtaa cagcaacgtc agcagcagaa
     3301 caggagtggg aacgccacga taatcattca acagccagat tgcgcctaat acgatgatag
     3361 cggttaaagc ctggcgaccg actactgcgg tagaggccgg agactgcaaa cccaaagcct
     3421 gacggcgcat tcttccgcgc cattgccaac caacaaaagc cattaagcca agcgcgccaa
     3481 tgatgaagcc ggtgctggcg gggagatagc tttgcccaat ttgtgacatc gcggcgctgg
     3541 tgggggatac agtcgtgccg ttggtgatgc caatgagtat gccgcgaaat gccaacatgc
     3601 ccgcgagggt gacaataaat gaaggaactt tacgatacgc gacccaccat ccgttccagg
     3661 caccgagaag cagtcccaga accagcgtca caatgatggt aagtggtaaa ggccagccta
     3721 gccagacgtc acaaatcgcc gcgacgccac ctaacagccc catcattgag ccgacggaaa
     3781 ggtcgatttc agcagaaatt atgacgaaca ccattcctac cgcgaggatg ccagtaatcg
     3841 cggtctggtg taacaggttg gagacgttac gggcgcttaa gtaggcacca tcggtggtcc
     3901 aggtaaagaa cagcatgatt gcgatgatag ctgcaatcat cacgaagacc tgcaaattca
     3961 gtgatttcag cccagaaaaa ccaccggatg tcggtacggc caatttcact tcagacggat
     4021 tgcttttcga catgatgttc gctcctcaat gcggcttcca tcacctgctc ctgagtcagg
     4081 ttatgattta tcaggttgg
//
LOCUS       DAJVTL010000237         4022 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.239, whole genome shotgun sequence.
ACCESSION   DAJVTL010000237 DAJVTL010000000
VERSION     DAJVTL010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4022
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.239"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(585..737)
                     /locus_tag="OQQ26_004292"
     CDS             complement(585..737)
                     /locus_tag="OQQ26_004292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859514.1"
                     /translation="MPSMIAIILLIILHIWLCRQGGDHFWSESRLNISLLMLDIEHLA
                     RGKGLR"
     gene            complement(725..1192)
                     /locus_tag="OQQ26_004293"
     CDS             complement(725..1192)
                     /locus_tag="OQQ26_004293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HCS1859515.1"
                     /translation="MSRVTAIISALVICIIVCLSWAVNHYRDNAIAYKEQRDKKVSEL
                     KQATATITDMQQRQRSADALDAKYTKELADAKAENDALRRKLDNGGRVFVKGKCPVPS
                     SAETSSASGMGNDATVELSPVAGRNVLGIRDGIISDQTALRTLQEYIRTQCLR"
     gene            complement(1189..1686)
                     /gene="rrrD"
                     /locus_tag="OQQ26_004294"
     CDS             complement(1189..1686)
                     /gene="rrrD"
                     /locus_tag="OQQ26_004294"
                     /EC_number="3.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme RrrD"
                     /protein_id="HCS1859516.1"
                     /translation="MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKD
                     IVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGAL
                     YSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVC
                     LWGQQ"
     gene            complement(1686..1901)
                     /gene="essD"
                     /locus_tag="OQQ26_004295"
     CDS             complement(1686..1901)
                     /gene="essD"
                     /locus_tag="OQQ26_004295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage lysis protein EssD"
                     /protein_id="HCS1859517.1"
                     /translation="MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGS
                     LVFGLLTYLTNLYFKIKEDKRKAARGE"
     gene            complement(1968..3020)
                     /locus_tag="OQQ26_004296"
     CDS             complement(1968..3020)
                     /locus_tag="OQQ26_004296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000799668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HCS1859518.1"
                     /translation="MKNTVKINSVDLINADCLHFIQSLPDDSIDLIVTDPPYFKVKPN
                     GWDNQWKGDEDYLKWLDHCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFNVLNH
                     IIWAKPSGRWNGCNKESLRAYFPATERVLFAEHYQGPYRGKSDGYAAKERALKQHIMA
                     PLISYFRDARAELGITAKQIAEATGKKNMVSHWFGASQWQLPNEADYRKLQALFSRIA
                     AEKFQEQQLEQPHHQLVASYDSLNRKYSELLDEFKSLRRYFSVSVSVPYTDVWMHKPV
                     QFYPGKHPCEKPADMLRQIINASSRPGDLVADFFMGSGSTIKAAMALGRRALGVELES
                     ERFNQTVKEINELVGK"
     gene            complement(3171..3374)
                     /locus_tag="OQQ26_004297"
     CDS             complement(3171..3374)
                     /locus_tag="OQQ26_004297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000917730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859519.1"
                     /translation="MIKQQDMTETAAAVLHFLPADKWVTPRMMTRTTGVSEAQCQLIL
                     TQLVLAGLAKDNGGYGNKFRRCQ"
     gene            complement(3598..4014)
                     /locus_tag="OQQ26_004298"
     CDS             complement(3598..4014)
                     /locus_tag="OQQ26_004298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001680441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859520.1"
                     /translation="MKKVLIAAIGFCLVGCAGMKLPEYSQVKASPYYTDCRAFAMDVY
                     KNDGYSKIAKTTILSMDDVKARYIVTGCVVAMGKNTVEEIKADLSAKGSSFGLISGAC
                     SSAACRVDVEQQMNAYVLGSYYAANKKFPDKMKAEF"
BASE COUNT         1033 a         1036 c          879 g         1074 t
ORIGIN      
        1 gcaaaaataa aaatactgta atatcaatca attacagcag tggtgatgac gaatgaaatt
       61 tcaaaaacta gcctttttcc gcgacgctcc cgccccgtgg caggccaccc caccgggagg
      121 acccgtcagc ctgacagcca tgacgaacgt ctgatacagc accctgcatg aatggcatcg
      181 ggataatcca gaaaggaata gcatcgtacc cacaagaatc tgtgtgagtg tcctgtttct
      241 tccacccccg cacaggactg gcgagcatga gggacaaacc cgcgaatcat tagcgcggta
      301 aaaacccggt gtgcatcgtt tttgattatt cccgcacact ctcgcagaag gagttccccg
      361 tcgggctacg gtctctgtta atacgggaat acggcgacga tacagcgcat gatgtgtcag
      421 gcttgaatac ctttatccgt taaaagggat atcagttaag ttatcccgtg tagggtataa
      481 gccattatca aagccactct gtagggagtg gcttttgtaa tggcaataaa aagccccgcg
      541 aatacgaggc taaatcctgg tatttgtaat gactggctct tatctcaacg cagcccctta
      601 ccgcgcgcaa gatgctcaat atcaagcatc agcaatgaga tgtttaatct ggattcactc
      661 cagaagtgat caccaccctg tctacagagc cagatgtgaa ggatgataag taaaattatc
      721 gctatcatcg aaggcattgc gtcctgatgt attcctgaag cgttctcagt gctgtttggt
      781 cgctgatgat tccgtcccgg ataccgagaa cgtttcgtcc agcaactgga gagagttcga
      841 cggtggcatc attgcccatg ccggaggcgc tggaggtttc ggctgaggat ggcacagggc
      901 attttccttt gacgaacacc cgaccaccat tatcaagctt gcgccgaaga gcatcatttt
      961 cagctttcgc atcagctaac tccttcgtgt atttagcatc gagtgcatca gcagaacgct
     1021 ggcgctgctg catgtcagta atggtggcgg tcgcctgctt cagctcactg acttttttat
     1081 ctcgctgttc tttgtaggcg atggcgttat cacggtaatg attgaccgcc cacgacaggc
     1141 agacgatgat gcagataacc agagcggaga taatcgcggt tactctgctc attgttgccc
     1201 ccacaaacag acttcacgct caatctcacg acgagtcatc aggcctttcc attgcttacc
     1261 gccagcgtat gtccagcgac gtagctggtc acatgcgcct ttgatatcgc cctggtttat
     1321 tttgcgaaga agcgtcgatg ttctgaaatt gccagcaccc acgttgtaga cgaacgagta
     1381 aagagcgccg cgcgttgttt ccggtatatc gactttgatg tacgggttaa tttgtctggc
     1441 gaccgtggca aggtctttat tcaggagggc tttgcattct gctttggtat acgttttacc
     1501 gagcatgatg tcttttcctg tatgcccgtg acatacagtc catacaccaa caatatcttt
     1561 gtatggtatg tagctgacac cttccagacc atcgttacca cttgggccag taattaacac
     1621 tgatgctata gcaattgctc cgccaccaat agcagcagca acggcttttc gtaatgatgg
     1681 aggcattatt cacctctcgc agccttgcgc ttatcttctt taatcttgaa ataaaggttt
     1741 gtcaggtacg tcagcaggcc aaataccagg ctacccagca cacctattgc tgcccactgt
     1801 gagggcgtga ctttatcgag cagttgtaaa aaccagtaac cggcactacc tgctgaggtg
     1861 ccataggcga cacccgttgt taacttatcc atggatttca taaccccacc tcgcagatgc
     1921 gggtgctgtg taatggaaat aaaaaggcca cctgcgtggc caccagatta tttccccacc
     1981 agctcgttta tctctttcac tgtctggtta aaccgctctg actcaagctc aacacctaag
     2041 gcccgacgcc ccagcgccat tgctgctttt attgtggaac cggatcccat aaaaaaatca
     2101 gcaaccagat caccaggtcg actactggca ttgattattt gcctgagcat atccgccggt
     2161 ttctcacacg gatgtttacc cgggtagaac tgaacgggtt tatgcatcca gacatcggta
     2221 taaggcacgg agactgatac ggagaaatag cgccggagag atttaaactc atccagcaat
     2281 tcagaatatt tgcgattcag tgaatcataa gatgccacca gctggtggtg tggttgttcc
     2341 agttgttgtt cctgaaactt ctctgccgct atacgggaaa acagtgcctg taacttccga
     2401 tagtcagcct cattcggcaa ctgccactga ctggcaccaa accagtggga aaccatattt
     2461 ttcttacctg tggcttcggc aatttgtttt gccgttatac ccagttcggc acgagcatcc
     2521 ctgaaatacg atatcagcgg tgccattatg tgctgtttga gtgccctttc ttttgccgca
     2581 tagccgtcac ttttgccgcg atatggcccc tggtaatgtt cagcaaacag aacgcgctct
     2641 gtggcaggaa aatatgcgcg cagactttct ttattacacc cattccaacg tccggacggc
     2701 ttcgcccaga tgatatggtt aagcacgttg aaacgttcac gcatcatgat ctcaatatca
     2761 gatgccaggc gatgcccaca gaacaggtaa aggcttccgg caggttttaa cacccgccag
     2821 aactgggcca gacagtggtc cagccactta aggtaatctt catccccttt ccactgattg
     2881 tcccaaccgt tgggtttcac cttgaagtaa ggcggatcgg taacaatcag gtcaatggaa
     2941 tcatcaggca gggactgaat aaaatgcagg caatcagcgt tgatcaaatc aacactgttt
     3001 atttttacag tatttttcat ggatcagtaa gcgtaactct ggtaggctca ctctgctttt
     3061 gcgctaaagc agtgggccgt ggttcgcttg tgaccagtaa gcatgagcga atggctggca
     3121 ggtgctacca acacccacca gccgcccatt ttcacagcag gaaaccgcca ttactggcag
     3181 cgtctgaatt tattcccgta cccgccgtta tccttcgcca gacccgccag aactaactga
     3241 gtcagtatta actggcactg ggcttcgctt actccggtag ttctcgtcat catgcgtggc
     3301 gttacccact tgtcagcagg taagaaatga aggactgcgg cggcggtttc tgtcatatct
     3361 tgctgtttta tcatgtcttt ttcccttctg gttaacatga cataccaata actcttgtct
     3421 aaaaagccag caagataaaa agtcagtatt cacgaccacc agcgtgttta ctgtactgca
     3481 ccaagtttac aggtacaaaa aacccgctca gtggcgggtt gctatcacag ctatatattt
     3541 acttattatg ccgttactaa catttatctt cgacatataa tcgaaaacaa ggtttactta
     3601 aaactctgct ttcattttat ccgggaattt tttatttgca gcataataac taccaagtac
     3661 ataagcgttc atttgctgct ctacatcaac ccgacatgcc gcactagaac aagctccact
     3721 gataagccca aaagaactcc ctttagcaga gagatcagct ttgatttcct ctacagtgtt
     3781 tttccccata gcaactacac accctgtcac aatatatcta gccttcacat catccatgct
     3841 aaggatagta gttttcgcaa ttttgctgta tccatcattt ttataaacat ccatggcaaa
     3901 cgcacggcaa tctgtataat acggacttgc tttaacttgc gaatactcag gtaatttcat
     3961 acctgcacaa ccaactaaac aaaaacctat cgctgctatt aatacctttt tcattacagt
     4021 ca
//
LOCUS       DAJVTL010000238         3971 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.240, whole genome shotgun sequence.
ACCESSION   DAJVTL010000238 DAJVTL010000000
VERSION     DAJVTL010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3971
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.240"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..242)
                     /locus_tag="OQQ26_004299"
     CDS             complement(<1..242)
                     /locus_tag="OQQ26_004299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HCS1859521.1"
                     /translation="MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
     gene            complement(453..1850)
                     /gene="ccp"
                     /locus_tag="OQQ26_004300"
     CDS             complement(453..1850)
                     /gene="ccp"
                     /locus_tag="OQQ26_004300"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HCS1859522.1"
                     /translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
                     SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
                     LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAEQRAEYYA
                     SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGSPLNPIEMASKSW
                     DEIIAKLEKDPQLKAQFLGVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
                     LTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKE
                     ERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFL
                     HSLNGVYTPYMQDKQ"
     gene            2255..3904
                     /locus_tag="OQQ26_004301"
     CDS             2255..3904
                     /locus_tag="OQQ26_004301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase"
                     /protein_id="HCS1859523.1"
                     /translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVNRY
                     LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
                     ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLI
                     EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
BASE COUNT         1031 a         1002 c          933 g         1005 t
ORIGIN      
        1 ttgatcgaca aatccatcaa tttatggacg ttttcgtcgt cccaggtctg gcagaaagtg
       61 gccaggttct gacgagcgtt gccatcaaga tataattcat cattgataat ctggaatgcg
      121 acatcatcgc gcatttcgtg cagcggaaat cgttttgact ccgcgatagt agaaatggcc
      181 tttgcgccaa aacgtgaatc gagtagttct gagcggaaat ccgttaacag cttctggtcc
      241 atttcgaact ccttaaattt atttgaaggc aataaaaaag taggatttat ccgcaatgga
      301 agcaaggcat tacaggctta atttaaataa caaaatccta agcagaaaaa cgacttttta
      361 taatataaac atttaacatg ataatattaa aaacagactt tattatcgta ataaaaatcg
      421 cctaaacatt cctgttcggg cgatcaaatt aattattgtt tatcctgcat atacggtgtg
      481 tacaccccgt tcagactgtg caggaaagct acgatatcat ccacatcctc ctgcggcagc
      541 tctttgccta cctgatagcg cagcatcagt ttcaccgccc cgtccagcgt cggcacgtca
      601 ccgcgatgga agtacggtgc cgttaaagca acgttacgta aaccgggtac tttctgacgc
      661 aatttatcac gctcttcttt agtcacattc atacgaccaa tatccgccgc cgtaatttcc
      721 ccaaagttaa agtctttttt cagccccaac ggttcaaagg aacgtccgcc gagaataata
      781 ccaccatgac aagttgcaca tttattatct ttaaataatt gatagccttt tttctgttgc
      841 gccgtcagcg cattctcatc tccacgcaac catttatcaa atggggaatc cggcgtaatt
      901 aatgttttct caaattcagc aatggcatca gtaatatttt cgccactgaa accttgcgga
      961 tagacgccga ggaactgcgc tttaagctgc ggatcttttt ccagcttagc aataatttcg
     1021 tcccaggatt tcgacgccat ttcaatcggg ttcaacggcg atccaccagc ctgatcctgc
     1081 aatgttgccg cacgaccatc ccagaactgc tcaacgttaa atactgagtt aaataccgtc
     1141 ggcgcgttaa tcggcccaac tgcgccacca acaccaatcg atgtttttct gccatcgacg
     1201 ccccccgcat tcaacgcatg gcaatgagcg catgaaatgg tgctatcagc cgataaacgg
     1261 ggatcgtgat acaacgcaaa gcccaacgcc actttttgcg catcggtagg cagtttttgc
     1321 gggatgggct gcaccggttc attgcgatgc tccggagcag tatcattact ggcgtaatat
     1381 tctgcgcgct gttctgcaat ccaggccagt atttccgccc gctcttcatc actcacctta
     1441 cccgcccagt gtagcgcggt ataacgcgtt ggtggcatag tttcatactg catcacccat
     1501 tcaatcttat tcagatcgct ttgcgaaacg ggtttatcag ccagcagagc agcacgcacg
     1561 gcctcgaggt taaaagattt atatccaagc ttaatgtcgt aatccatcaa ctgtttcgcg
     1621 ccaggaatat aataataggc gggtaattct gccgaaggcg tgtggcaata gtcgcatcct
     1681 ttttcgcgga gaaagcctaa aaccttatta ttttcactga cagcagatgc ctgaacatcg
     1741 gcctgtttac tgcgtttatt atcgtggtac cacacataac cagataaccc taaatagcaa
     1801 atcgcgacgc cagccaggcc gatcgcggta atacgtgaga ccattttcat tattcttccc
     1861 tcacggtggt gagttattgt gacccagaaa attttccaga atgctgcaaa cgtctctgcg
     1921 agacaaagcc atcataaaaa acagtgagat acgctttttg ataggaatca atcaattaca
     1981 tgaatataaa ctatcaataa gatagcctgt gcctattacc cagatcagga atggcatatc
     2041 atgattgcgg cgagagcagg attgaatgtt ctgaaaatga aaagcaacac gaaatccgta
     2101 tttttataaa ttccatggat attagtgcgt tatatttttt gacaggttaa taaacgtgat
     2161 ccaccgcacg ctttgtcgcc caccaggcgg agcgaatgac tacccttaaa gaaaagcccg
     2221 ataattagcg acgaatttcg gaggttggat ccttatgctc aatcagaaaa ttcaaaaccc
     2281 taatccagac gaactgatga tcgaagtcga tctctgctat gaactggacc cgtatgaatt
     2341 aaaactggat gagatgatcg aggcagaacc ggaacccgag atgattgaag ggctgcccgc
     2401 ctctgatgcg ctgacgcctg ccgatcgcta tctcgaactg ttcgagcatg ttcagtcggc
     2461 gaaaattttc cccgacagta aaacctttcc cgactgcgca cccaaaatgg acccgctgga
     2521 tattttaatc cgctaccgta aagtgcgccg tcatcgtgat tttgacttgc gcaagtttgt
     2581 tgaaaatcac ttctggctgc cggaggtcta ctccagcgag tatgtatcgg acccgcaaaa
     2641 ttccctgaaa gagcatatcg accagctgtg gccggtgcta acccgcgaac cacaggatca
     2701 cattccgtgg tcttctctgc tggcgctgcc gcagtcatat attgtcccgg gcggccgttt
     2761 tagcgaaacc tactattggg attcctactt caccatgctg gggctggcgg aaagtggtcg
     2821 ggaagatttg ctgaaatgca tggccgataa cttcgcctgg atgatcgaaa actacggtca
     2881 catccccaac ggcaaccgca cctattattt gagccgctcg caaccaccgg tttttgcgct
     2941 gatggtggag ttgtttgaag aagatggtgt acgcggtgcg cgccgctatc tcgaccacct
     3001 gaaaatggaa tatgccttct ggatggacgg tgcagaatcg ttgatcccta atcaggccta
     3061 tcgccatgtt gtgcggatgc cggacggatc gctgctcaac cgttactggg acgatcgcga
     3121 cacgccgcgt gacgaatcct ggcttgagga cgttgaaacc gcgaagcatt ctggtcgccc
     3181 gcccaacgag gtgtaccgcg atttacgcgc gggggcggcc tccggttggg attactcttc
     3241 ccgttggctg cgtgatactg gtcgtctggc gagcattcgt accacccagt tcatccccat
     3301 cgatctgaat gccttcctgt ttaaactgga gagcgccatc gccaacatct cggctctgaa
     3361 aggtgagaaa gagacagaag cactgttccg ccagaaggcc agtgcccgtc gcgatgcggt
     3421 aaaccgttac ctctgggatg atgaaaacgg catctaccgc gattacgact ggcgacgcga
     3481 acaactggcg ctgttttccg ctgccgccat tgtgccgctc tatgtcggta tggcgaacca
     3541 tgaacaggcc gatcgtctgg caaacgccgt gcgcagtcgg ttactgacac ctggcgggat
     3601 tctggcaagc gagtacgaaa ccggtgaaca gtgggataaa cccaacggct gggcaccgtt
     3661 acagtggatg gcaattcagg gatttaaaat gtatggcgat gaccttctgg gtgatgaaat
     3721 cgcgcgaagc tggctgaaga cggtgaatca gttctatctg gaacagcaca aactgatcga
     3781 aaaataccat attgccgatg gtgttccccg cgaaggcggc ggtggcgagt atccgttgca
     3841 ggatgggttt ggctggacta acggtgtggt acgccgttta attggtttgt acggcgaacc
     3901 ataatatttt tacagccagc cgctaacttc ctgctggctg taaaattatc ctcttcagga
     3961 ggagtaatgc c
//
LOCUS       DAJVTL010000239         3958 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.241, whole genome shotgun sequence.
ACCESSION   DAJVTL010000239 DAJVTL010000000
VERSION     DAJVTL010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.241"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..262)
                     /locus_tag="OQQ26_004302"
     CDS             complement(<1..262)
                     /locus_tag="OQQ26_004302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859524.1"
                     /translation="MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQW
                     VTAARKGLNTPGSRTVAELESEVMQLRKALNEARLERDILKKA"
     gene            673..870
                     /locus_tag="OQQ26_004303"
     CDS             673..870
                     /locus_tag="OQQ26_004303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005008498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HCS1859525.1"
                     /translation="MNAHDIEPTILRATGNTHPLDVTFIHEEDLATPWKPEQSSVYAH
                     VNPYGIFELDMETRLPIEVVA"
     gene            complement(952..2661)
                     /locus_tag="OQQ26_004304"
     CDS             complement(952..2661)
                     /locus_tag="OQQ26_004304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858142.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HCS1859526.1"
                     /translation="MPLNKTFSSSIFSTKNSLSTDMSVNRDNRTITSSIMRVSNSSEL
                     IQFKNKTAPYFSEKRNVKVNINGVAKDIYGRQIVCRHLASYWEMNFMETNGKVNYQLL
                     STPDAIAKNVCLEKTEDFSKSPAYIYFVENKKWGTVITNFFYNMKKNGDFVRTLSACT
                     LNHQMALGLKIKRVQESEKWVVQFFDPNRTVTHKRTVFTCDSHFELSQLSAKDFFDDF
                     YWKIYGLEQPGQVIFEDRHNSPLTNTVKLLPDELINSRVIYHAITKNLTEVLFILMEK
                     YKNGEISQSKLVNLLATRSSDGTPAFYIALQNGCSDIIQVYGKILNMCNLSQETILTL
                     LAAVGANNVPGLCMSFMNGHVDTIKAYGEIVFKTPLTSDKRLYLLAAKDSHDLPGLFF
                     ALQNGHADSIRMFGSLLNKKMLSSEQIKELLKVKHGLFMALQNGHTKAIMAYGDILKI
                     LPPHQEYIDELLWIKNPNGTSGLFMAFYNGHTETIRAFCNILKNYSFTTRRLVEMLSA
                     TNKDGIPGVFVSVVNRDKETILEYCRIIKENNLEPDTIAEQFSKKMKKTFIEIINRFN
                     HFL"
     gene            complement(3093..3812)
                     /locus_tag="OQQ26_004305"
     CDS             complement(3093..3812)
                     /locus_tag="OQQ26_004305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector
                     phosphothreonine lyase"
                     /protein_id="HCS1859527.1"
                     /translation="MPIKKPCLKLNLDSLNVVRSEIPQMLSANERLKNNFNILYNQIR
                     QYPAYYFKVASNVPTYSDICQFFSVMYQGFQIVNHSGDVFIHACRENPQSKGDFVGDK
                     FHISIAREQVPLAFQILSGLLFSEDSPIDKWKITDMNRVSQQSRVGIGAQFTLYVKSD
                     QECSQYSALLLHKIRQFIMCLESNLLRSKIAPGEYPASDVRPEDWKYVSYRNELRSDR
                     DGSERQEQMLREEPFYRLMIE"
BASE COUNT         1151 a          806 c          723 g         1278 t
ORIGIN      
        1 ttgctttttt taatatatct cgctcaagtc gtgcttcatt taaagcctta cgcagttgca
       61 taacttcaga ttccagctca gccactgtgc gggagcctgg tgtattgagc ccttttcttg
      121 cggcggtaac ccattgtcct aaagtgcctt caggaacaga taatcgggaa gcgccttcac
      181 tgatcgaaag ctgattttca ggaaccgttt tgacggcttc ggctttaaac tccgtagagt
      241 aacgttgggt ttttctgctc attattggct ccttctgatg ccattctatt tcaggaagga
      301 gtgtccgtta aactcaggct acctcagata agcttgatac aactggtctg gtatatacag
      361 tttctttgag tgcggttacg tccacagagg taacggtaaa agtaacccct tgtcgggacc
      421 actccgaccg cgcacagagg cattttcatc gctgacaggc cgcattgcct cgcagggctg
      481 gaggaggatc ggtgatatcc ggacgaccgt accggcttac gccgggcttc ggcggtttta
      541 ctcctctgcc atgtgcaaca acggagtgcc gccttacatg ccgctggcgc ggcatatcct
      601 ggtaacattt ttgttgatac caccttccgg ccttatcctg accagtgggc tttcctggca
      661 tcgatgatac cgatgaacgc gcatgatatt gagccgacga tattacgggc aactggaaat
      721 actcaccctc tggatgtgac ctttatccat gaagaagatt tggccacacc atggaaacct
      781 gaacaatcat cagtttacgc ccatgtaaac ccctacggga tatttgaact cgatatggaa
      841 acaaggttgc caatcgaggt ggttgcctga aagttggcag ttacccggtc actacacctt
      901 gttggagtga acatatcaaa aacaggtaat tacacaattt aaattacagt ctcataaaaa
      961 atgattaaat ctatttatta tttcaataaa cgtttttttc atcttctttg aaaattgttc
     1021 tgctatagta tccggttcca gattgttctc ttttattatt ctacaatact ctaatattgt
     1081 ttctttgtct ctatttacta cagatacaaa tacaccagga ataccatctt tattagttgc
     1141 ggacagcatt tcgaccaatc gtcttgtggt aaaactatag ttttttagaa tattacaaaa
     1201 ggcacgtatt gtttcggtat ggccattata aaatgccata aaaagtcctg atgtaccgtt
     1261 gggatttttt atccataata attcatctat atattcctgg tgagggggga gtatttttag
     1321 tatatctcca tacgccataa tggcctttgt gtgcccattt tgaagtgcca taaacaaccc
     1381 atgctttact ttcaataatt ctttaatttg ttcactacta agcattttct tattaagcag
     1441 acttccgaac atacgaatac tatctgcatg tccattctgc aatgcaaaaa ataacccagg
     1501 taaatcatgg ctgtctttcg cagctaatag atataatctc ttatcggaag ttaacggggt
     1561 tttaaagact atttccccat aggcttttat tgtgtctaca tgtccgttca taaaagacat
     1621 gcataaaccc ggcacattgt ttgcccctac cgcagcaagc aatgtaagta ttgtttcttg
     1681 actaagattg cacatattta atatcttacc atatacttga ataatgtctg aacatccgtt
     1741 ttgaagtgct atataaaatg caggagtacc atcagagctt ctcgtggcca gaaggttcac
     1801 cagtttagat tgagaaattt caccattttt gtatttttcc atcagtataa ataatacttc
     1861 tgtcagattc tttgttatcg catgatatat aactctggaa ttgatcaatt catctggtaa
     1921 aagtttcact gtgtttgtta gaggggaatt atgcctatct tcaaatatta cctgcccggg
     1981 ttgctccaga ccataaattt tccaataaaa atcatcaaaa aaatccttag cggataattg
     2041 actcagttcg aaatggctat cacaagtaaa tacagtacgt ttatgagtaa cagttcgatt
     2101 aggatcgaaa aactgaacaa cccatttttc actttcttgt acgcgcttta ttttcaaccc
     2161 taacgccatt tggtggttta atgtgcatgc tgataatgtt ctgacaaagt ctccattttt
     2221 tttcatgtta taaaaaaaat tagtaataac tgttccccac tttttatttt ccacaaaata
     2281 aatataagct ggtgattttg aaaaatcttc cgttttttcc aaacatacat tttttgcaat
     2341 agcatcaggg gtgctaagaa gctgatagtt taccttccca tttgtttcca taaaattcat
     2401 ttcccaatag gaagctaggt gacggcaaac tatttgtctt ccatatatat cttttgccac
     2461 tccatttata tttaccttca catttctctt ttctgaaaaa taaggtgctg ttttattctt
     2521 aaactgaatt agttcactgg agtttgagac cctcataata gaacttgtta ttgttctatt
     2581 atctctgtta acagacatat ctgttgataa cgaatttttt gttgaaaata tactagatga
     2641 aaatgtttta tttaacggca tagaagacaa ccatagagat gttataatac tattagattg
     2701 cagttactaa tagtaaaagc ctccttacaa ggaggtagct tattcagaat gctcctataa
     2761 gatagcgagc tcgtcaacga tacagatgat ctgattatat tgtgcaaaag gagaacagga
     2821 aaataggcac tggaaaagat gaaggcctga tgggagcatt aactaatgca aaatccgaca
     2881 ggttaatatc ccgaaaagca atcaaacgac tcaaacagga gatgcacgct gaagtggtgg
     2941 acaactgttc ggatttcaga tgagtagctc agcagtttat gagccgaatg ctctgtcacg
     3001 ggcaggaatc aggctgcata cgcagtgcca aatctaatcg tagttattat aaccagtttt
     3061 caagctacaa ggtggtgtag ctggcatctt ctctactcta tcatcaaacg ataaaatggt
     3121 tcctctcgta acatttgctc ttgcctttca cttccatctc gatcgcttcg tagttcatta
     3181 cgatagctga catatttcca gtcttcaggt ctaacatctg acgccggata ctccccggga
     3241 gcgattttgc ttcttaatag attagactcg agacacatta taaattgtcg tattttatga
     3301 agtaataaag cactatattg cgagcattcc tgatctgatt ttacatatag cgtaaactga
     3361 gctcctatcc ccacacgaga ttgctgagaa actcgattca tatcagttat cttccattta
     3421 tctataggac tgtcctctga aaataataaa ccagacaaaa tttggaatgc cagaggaact
     3481 tgctccctag ctatactaat atgaaacttg tccccaacaa aatccccctt actctgagga
     3541 ttttcacgac atgcatgaat aaacacatct ccactatggt tcacaatctg gaatccttgg
     3601 tacatgacag aaaaaaattg acatatatca gagtaagttg gcacgttcga tgctactttg
     3661 aaatagtacg ctgggtattg ccgtatttgg ttgtacaata tattgaagtt atttttcaat
     3721 ctttcattcg cagaaagcat ctgcggtatt tcagacctca caacattcaa agaatctaaa
     3781 tttagtttta gacagggctt ttttatgggc atagaaaacg tcctctataa aatagatata
     3841 ttatcttata ttgattgttt atcatctttt ataaaacgat acattatatg taatgtatgt
     3901 aagcgtaagg gtcttctccg atcatggtgg gaaggcttag aacgccatat tcagtttc
//
LOCUS       DAJVTL010000240         3846 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.242, whole genome shotgun sequence.
ACCESSION   DAJVTL010000240 DAJVTL010000000
VERSION     DAJVTL010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.242"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            14..469
                     /locus_tag="OQQ26_004306"
     CDS             14..469
                     /locus_tag="OQQ26_004306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001416140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HCS1859528.1"
                     /translation="MELRGWFPKGSSTYLLMRETHYNAGIFVWVLMFSRLIIKHRYSD
                     PSIVPPPPAWQMKAASLMHIMLYITFLALPLLGIALMAYSGKSWSFLGFNVSPFVTPN
                     SEIKALIKNIHETWANIGYFLIAAHAGAALCHHYIQKDNTLLRMMPRRK"
     gene            complement(1439..2011)
                     /gene="cdtC"
                     /locus_tag="OQQ26_004307"
     CDS             complement(1439..2011)
                     /gene="cdtC"
                     /locus_tag="OQQ26_004307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin type I subunit CdtC"
                     /protein_id="HCS1859529.1"
                     /translation="MKTVIVLFVLLLTGCASEPANQRNLLTQFVGNNAPVDPEPSPVL
                     VNIRNVLTGGIIRNPVGSDFNVNNWVISEVKTNDLDLISAPGGHVQIKNPDGNECFAI
                     LNGQLAVAKRCSESDRNALFTFITSDTGAVQIKSIGSGQCLGNGESITDFRLKKCVDD
                     LGRPFDTVPPGLLWMLNPPLSPAIMSPLTS"
     gene            complement(2008..2829)
                     /gene="cdtB"
                     /locus_tag="OQQ26_004308"
     CDS             complement(2008..2829)
                     /gene="cdtB"
                     /locus_tag="OQQ26_004308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000734593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin type I nuclease
                     subunit CdtB"
                     /protein_id="HCS1859530.1"
                     /translation="MKKLLFLLMILPGISFADLSDFKVATWNLQGSNAPTENKWNTHV
                     RQLVTGSGAVDILMVQEAGAVPASATLTEREFSTPGIPMNEYIWNTGTNSRPQELFIY
                     FSRVDAFANRVNLAIVSNRRADEVIVLPPPTVVSRPIIGIRIGNDVFFSTHALANRGV
                     DSGAIVNSVFEFFNRQTDPIRQAANWMIAGDFNRSPATLFSTLEPGIRNHVNIIAPPD
                     PTQASGGVLDYAVVGNSVSFVLPLLRASLLFGLLRGQIASDHFPVGFIPGRGARR"
     gene            complement(2826..3539)
                     /gene="cdtA"
                     /locus_tag="OQQ26_004309"
     CDS             complement(2826..3539)
                     /gene="cdtA"
                     /locus_tag="OQQ26_004309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000358619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin type I subunit CdtA"
                     /protein_id="HCS1859531.1"
                     /translation="MDKKLIAFLCTLIITGCSNGIGDSPSPPGKNVELVGIPGQGIAV
                     TSNGATPTLGANNTEFPEVSIMSTGGALLTIWARPVRNWLWGYTPFDSVNFGENRNWK
                     VVDGKDAGTVKFVNVAQGTCMEAFKNGVIHNTCDDNSLSQEFQLLPSTNGNVLIRSSA
                     LQTCIRADYLSRTILSPFAFTITLEKCPGAKEETQEMLWAISPPVRAAKPNLIKPELR
                     PFRPLPIPPHDKPDGMEGV"
BASE COUNT         1151 a          876 c          731 g         1088 t
ORIGIN      
        1 aacctatgcc gcgatggaac tccgtggctg gtttcctaaa ggtagtagta cttatctgct
       61 gatgcgagaa acacattaca atgcgggtat attcgtttgg gtgttaatgt tttcacgcct
      121 gattataaaa caccgttata gtgatccttc tattgtacca ccgccacctg cctggcaaat
      181 gaaagcggct tcgctaatgc acatcatgct ttatataacc ttccttgcac ttcctctgct
      241 ggggattgct ttgatggctt acagtggaaa atcgtggagt ttccttggtt tcaatgtgtc
      301 tccctttgtt accccaaaca gcgaaattaa agcactgata aaaaatattc acgaaacctg
      361 ggcgaatata ggttactttt taatcgcagc tcacgctggc gcagcactct gtcatcacta
      421 cattcagaaa gataatactc tgttacgaat gatgcctcgc cgcaaataag tcgatcccct
      481 gacaaggaaa tgtgaaccat ggacatcaac gcgtcataaa tgtttacgca agtgcacaat
      541 gcactctttc cactatcaac aaggaggagc agaaactgtg taaatcgtac aatggtaaga
      601 cttatcaaaa atacaggtta attttggtat ttaaaccttt tttacttgtt agtatgatac
      661 aaaggctttc aaaaaagctg gggaattcaa caactcttgg aaattatgga ctttgtcccg
      721 cggctttaat ctgacggccg cgttcctttt ttgactcaat tattgacccc ttctctacgc
      781 aacttcagtt cccaccacca actttgcggc agtttcatag gatgaatgtc taaaagaata
      841 atggtgagcg ataagaaaac gactgaataa ctgcacattt tcgctcgaaa gcttcctgtc
      901 agatccatag cgaatcaagt gctgaatgtc acagtatcga acagaaaaca gtgacgatct
      961 aacccttcaa gaatattcta cgattgttct gtttaggaaa agcaaggcgg gaagtcggga
     1021 gataagtctt tgataaagtg gcggagagag ggggatttga acccccggta gagttgcccc
     1081 tactccggtt ttcgagaccg atgatacaga gtcgaaaaat caaagagtta aaaatttttc
     1141 ttggaataaa tgccttaaaa tcgtacacga aaaatcaata aattacataa cattaaagaa
     1201 gaatattcca agccttcttg aggccaccac ctgttttcag gcgtcattca gacgtgattt
     1261 gccccagatt gggaaagcac gcttttttct cagcttattc cgttttgcct gtgtgttgaa
     1321 taattccact gcagttatat aaaatcggta acggctggaa atcattcaat actcgcacta
     1381 tcgaaaagtt taccagccaa ccgcggcaag ttgcatacaa cttgccgcgt tttccagatc
     1441 agctcgttaa tggagacatt attgccggag ataatggtgg attcagcatc cagagtaacc
     1501 ccggcggcac cgtatcaaaa ggacgcccaa gatcatcaac acattttttt aatctgaaat
     1561 ctgtaatgct ctctccattc cctaggcatt gaccgcttcc tattgacttg atttgcacag
     1621 ccccagtatc actggttata aatgtaaaca atgcgttacg gtcactttca gagcaccgct
     1681 tagccactgc caattgcccg tttagaatag caaagcattc attgccatca ggatttttaa
     1741 tctgaacatg ccctcccggt gccgatatca aatccaaatc attagtcttt acttcagata
     1801 taacccaatt atttacatta aagtcactgc caacaggatt tcggattatc ccccctgtaa
     1861 gaacgtttct gatattaacc aatactggac tgggttcagg gtctacaggg gcattgttgc
     1921 cgacaaactg agtaagaaga ttacgctgat ttgcaggttc agaagcacaa cctgtcagca
     1981 gtaaaacaaa aagcacaata actgttttca tcttcttgct cctcttccag gaataaagcc
     2041 aaccggaaag tgatcagagg caatttgccc tcttaataat ccgaataaca acgaggccct
     2101 caacagagga agtacaaagc tcactgaatt tccaactacc gcataatcaa gaacaccacc
     2161 actggcttgc gttggatctg gtggagcaat aatatttaca tgattacgaa tccctggttc
     2221 aagagttgaa aatagtgtag ccggtgaacg gttaaaatct cctgcaatca tccagttagc
     2281 ggcctgtctt ataggatccg tttgtctgtt gaagaactca aaaacactat ttacaattgc
     2341 tcctgaatcc acgccccgat tcgccaatgc atgggttgag aagaaaacat cattaccaat
     2401 tctaatgccg atgatcggtc gtgatacaac agttggagga ggtaatacaa tcacctcatc
     2461 agctcttctg tttgaaacaa tcgcaagatt tactctgtta gcgaatgcat caacacgtga
     2521 gaaatatata aacaactcct gtgggcgact attggttccg gtattccaga tatactcatt
     2581 catcggaata ccaggagtgc taaattctcg ctcagtcaac gttgcagaag ctggtactgc
     2641 ccctgcctcc tgaaccatca ggatatcaac agcaccactt cccgtaacaa gttgtcggac
     2701 atgtgtgttc catttatttt ctgtcggtgc atttgaaccc tgcaaattcc aggttgcaac
     2761 tttaaaatcg cttaaatctg caaaagaaat acccggcaaa atcattaaca ggaataataa
     2821 ttttttcata ctccctccat tccatcaggt ttgtcatgag gtggaattgg caatggtctg
     2881 aatggtctta actctggctt aatcagattt ggttttgccg ctctgacagg tggacttatt
     2941 gcccatagca tttcttgcgt ttcttctttt gcaccagggc atttctcaag ggtgattgta
     3001 aaagcaaacg gtgacagtat agttctgctt aaatagtctg ctcttataca cgtctgcaag
     3061 gcactacttc ttataagcac attaccatta gtagaaggca gtaactgaaa ctcctgagat
     3121 aacgagttat catcacaggt attatgtatc accccgtttt taaaggcctc catgcaagtc
     3181 ccctgggcaa cattaacaaa tttcactgtg ccggcatctt taccatccac aaccttccag
     3241 ttccgattct caccaaaatt tactgaatca aaaggagtat acccccaaag ccagttacga
     3301 acaggtctgg cccaaatagt aagcagcgcc ccaccagtgc tcattattga aacttcagga
     3361 aactcagtgt tgttggctcc aagtgttgga gttgcaccgt ttgaagtcac tgcaatacct
     3421 tgtccaggga ttccaaccaa ttctacattt tttcccggag gggaaggtga atctccgatc
     3481 ccattcgagc aaccagtaat tataagtgtg cacaaaaatg caattagttt tttatccact
     3541 gtatttcctc ctctgcacca cctctttttt ataaaaaaac agaaacaaca aagcaacata
     3601 aatattactg gtaagattaa tgagaaaatg tgaaagcagc acaacaaaca agtttattat
     3661 aacgttcgtt attgtttttc aggttacaaa caacaaacta ctatataatt ctttatattc
     3721 ccaaacacta tgcaacatga ccataacgtc tgcagttcgg tggagtttgc tcaaacatac
     3781 tcgccagtct gtttcattac gtaatacacc tgtttaggtg tattcataag accagctagg
     3841 tataaa
//
LOCUS       DAJVTL010000241         3764 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.243, whole genome shotgun sequence.
ACCESSION   DAJVTL010000241 DAJVTL010000000
VERSION     DAJVTL010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.243"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1111)
                     /locus_tag="OQQ26_004310"
     CDS             complement(<1..1111)
                     /locus_tag="OQQ26_004310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HCS1859532.1"
                     /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLATALLSTFLTNDVAL
                     FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
                     AQMAPLAGAMMLTLLLLCWCCFPGKALQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE
                     FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS
                     HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLANLIA
                     LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILP"
     gene            complement(1108..1575)
                     /gene="mntR"
                     /locus_tag="OQQ26_004311"
     CDS             complement(1108..1575)
                     /gene="mntR"
                     /locus_tag="OQQ26_004311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HCS1859533.1"
                     /translation="MSRRAGAPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK"
     gene            1761..1889
                     /gene="mntS"
                     /locus_tag="OQQ26_004312"
     CDS             1761..1889
                     /gene="mntS"
                     /locus_tag="OQQ26_004312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HCS1859534.1"
                     /translation="MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK"
     gene            2161..3744
                     /gene="opgE"
                     /locus_tag="OQQ26_004313"
                     /pseudo
     CDS             2161..3744
                     /gene="opgE"
                     /locus_tag="OQQ26_004313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415336.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
BASE COUNT          992 a         1013 c          866 g          893 t
ORIGIN      
        1 ccgggagtat aactaacaaa acatatccca ccaacgccgc ccacaacagc atcggtattg
       61 aatagagatg gaaacgccac cagatgcggc gatcgttcgc catacgtagc gcaatcaaat
      121 ttgccagcga tccgggtaat aacccaaagc cacctacgtt taccgcccat gccagtaata
      181 aagacggcgg cacatagttc agcaacaata tggtactcgg cacgttactg atcacctgcg
      241 ataaaccgat tgccgttaac cataacccgg gttcagatag atgactcacg ttacccaaca
      301 cgccttgcaa cgctggaagc tgggtcagta aatggacgtc gataaacatc gccataaaca
      361 ccagcagcag cgtccagtcc acactgagca ccacgcgacg tgccagcagc gcaaagcctg
      421 ccgccacaat caccagtccc cacagctctt gtttgaactc cagcgccgtc agaaagacga
      481 tatacagccc cagacaactc cacaccagcc gcggtttcca ctccggtgtt tgcacccccg
      541 tatggtattg cagcgccttt ccagggaaac aacaccagca caggagcagg agcgtcagca
      601 tcattgcgcc agccagcggt gccatttggg caataaatcc ggcaaacgaa agaccagaac
      661 gtccccagat aagaatattt tgcgggttgc caattggcgt cagtagcgaa ccagcgttga
      721 ctgccagcgc ctcaaaaata atcagccgat taaccgggat ctcacacagt ctttttagcg
      781 tgatagtcag cggaacaaca ataaacagcg cgacatcgtt ggtcagaaag gtagaaagca
      841 gcgccgtcgc cagcaccata aacatcgcca gccgacgctc cgtagcaaag cggcgcacca
      901 ttttgcgccc cagcacatca aaataaccgc ttaactccac acctttggtc agcagcatca
      961 ggccgcttaa ggtgatgatg gtgtgccagt cgatagcagc aggccaggat ttcggtgcaa
     1021 agggcacgaa aaagcttaat ccgataccaa caagaattaa taactgaaaa aaacgatcgc
     1081 cttgcagcgt gcgtaaaaaa ggcaggctca tttggcaccg tgtttctggg taaacaaacg
     1141 aaaagcgtcg agcgtctctt cactaacatg gtgctccatg ccttccgcgt cgcgacgggc
     1201 gatttccgga ctgacgccca acaccaacaa gaaattttcg actatctgat gtcgctcgcg
     1261 gctttcctgc gccagcttct ctccttctgc cgttaaaaac acgccacgcc aggggatcat
     1321 ttcaatcagc cccatggttg ccagccgctt aagcatttta gccaccgtcg gttgcgaaac
     1381 tcccagacga gcagccatgt ccacctgacg agcttccccc acttccctga tcaagtcaga
     1441 aatcagctca acgtaatcat caataagctc gcgccgatga gcctctctga cctggcggaa
     1501 cccttcaacg tgctcttcca cgttcactaa ctgcgtcact ttttttgctg ttggcgcacc
     1561 tgcgcgacga ctcattgtgc ttcctcatta tggtgacgca tacatagcgt tctcatttcg
     1621 tgcgcacatt gtaaaccaga gttgcgaagg tacaaaaaat taacgtttta gcaatagcta
     1681 tataatatag cctgtgctat atctgtatgt aatgcaatca tccctcaagg atcgacggga
     1741 ttagcaagtc aggaggtctt atgaatgagt tcaagaggtg tatgcgcgtg tttagtcatt
     1801 ctccctttaa agtacggtta atgctgctct ctatgttgtg cgatatggtc aacaacaaac
     1861 cgcagcaaga taaaccttca gataaatagc ggcgtcgcgg tacgccgctt cactcctgct
     1921 tttatgcagg cataacgcgt tttggtctga aaaaccccac tttttgtcgg atttgcaatc
     1981 cccttcgcaa aagatttgtt cgtcagtagt tgacctgaac ggcggctcgc tctatcttct
     2041 tgcagccctg cgtatattgc ggctcgcgga tgcggacccc tttcccctct tcacgcactc
     2101 ttgcaggtat tgacccttga cgccagggta agcacatggc gtttgttacg atagtggcat
     2161 atgaatttaa ccctcaaaga atcgcttgtt acccgtagcc gggtatttag cccgtggact
     2221 gcgttctact ttttacagtc gctattaatt aacctcggct taggttaccc cttcagtttg
     2281 ctctacaccg ctgcgtttac ggctattttg cttttgctat ggcgaacatt gcctcgcgta
     2341 caaaaagttc tggtcggtgt cagttcgctg gtggcggctt gttatttccc ttttgctcag
     2401 gcctacggcg cacctaactt caatacattg ctggcattgc actccaccaa tatggaagag
     2461 tcgaccgaaa tcctgacgat ttttccgtgg tacagctacc tggtcggctt atttattttt
     2521 gcgctcggcg taatagcaat caggcgaaaa aaagagaatg aaaaagcgcg ctggaatacc
     2581 ttcgacagcc tgtgtctggt attcagtgtg gcgacatttt ttgttgctcc cgtgcaaaac
     2641 ctggcctggg gtggcgtatt taaactgaaa gatactggct atccggtatt tcgttttgct
     2701 aaggatgtca tcgtcaataa taacgaggtg attgaagagc aagaacggat ggcaaaactt
     2761 tccggaatga aagatacctg gactgtcact gccgttaagc cgaagtatca gacctatgtg
     2821 gtggtgatcg gtgaaagcgc gcgtcgcgat gccctcggtg cctttggcgg tcactgggac
     2881 aataccccgt ttgccagcag cgttaacggt ttgatatttg ctgactacat tgccgccagt
     2941 ggctccacgc agaaatcgct tggcttaacg ctcaatcgcg tagtcgatgg caaaccacag
     3001 tttcaggata actttgtcac cttggcaaat cgcgcgggct tccagacctg gtggttttcc
     3061 aactagggcc aaatcggcga atacgatacc gctatcgcca gcatcgccaa acgtgcagat
     3121 gaagtgtact tcctgaaaga aggtaatttt gaagcagata aaaacacgaa agacgaagcg
     3181 ttactggata tgaccgctca agtgctggcg caagagcact cgcaaccgca gctgattgtt
     3241 ctgcatctga tgggctcgca tccgcaggcc tgcgacagga cacaaggcaa atacgaaacc
     3301 tttgtgcaat cgaaagaaac gtcgtgctat ctctatacca tgacgcaaac ggacgattta
     3361 ctgcgcaagc tgtacgatca gttacgcaac agcggcagca gcttctctct ggtttacttt
     3421 tctgaccacg gtctggcctt taaagagcgc ggcaaagacg tgcaatacct tgcccatgat
     3481 gataaatatc agcaaaattt ccaggtgcct tttatggtca tttccagcga cgataaagcg
     3541 catcgtgtga ttaaagcccg ccgctcagcc aatgacttct taggcttttt ctcccaatgg
     3601 acgggaatta aagcgaagga aataaatatc aaatacctgt ttatatctga gaagaaagcc
     3661 gggccgatat acatcaccaa cttccagtta cagaaggtgg attacaacca tctcggaacc
     3721 gatattttcg acccgaaacc ttaaaaacaa aaatccgccc cgag
//
LOCUS       DAJVTL010000242         3761 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.244, whole genome shotgun sequence.
ACCESSION   DAJVTL010000242 DAJVTL010000000
VERSION     DAJVTL010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3761
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.244"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(52..813)
                     /gene="kduD"
                     /locus_tag="OQQ26_004314"
     CDS             complement(52..813)
                     /gene="kduD"
                     /locus_tag="OQQ26_004314"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HCS1859535.1"
                     /translation="MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE
                     PTETIEQVTALGRRFLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDAL
                     EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGICVPSYTA
                     SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
                     GLPSDLMGPVVFLASSASDYVNGYTIAVDGGWLAR"
     gene            complement(843..1679)
                     /gene="kduI"
                     /locus_tag="OQQ26_004315"
     CDS             complement(843..1679)
                     /gene="kduI"
                     /locus_tag="OQQ26_004315"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HCS1859536.1"
                     /translation="MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDR
                     IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
                     ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
                     RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
                     MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFNDMDHVAVKD
                     LR"
     gene            complement(1965..3146)
                     /locus_tag="OQQ26_004316"
     CDS             complement(1965..3146)
                     /locus_tag="OQQ26_004316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417321.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HCS1859537.1"
                     /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
                     AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSCAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQ
                     PRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
                     AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
                     RRINVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
                     E"
     gene            3401..>3761
                     /locus_tag="OQQ26_004317"
     CDS             3401..>3761
                     /locus_tag="OQQ26_004317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HCS1859538.1"
                     /translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA
                     LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL
                     IYAVAITNSLTEQLAKHM"
BASE COUNT         1001 a          998 c          838 g          924 t
ORIGIN      
        1 gatataaaaa aacctgccat gcggcagggt cataaaagta agaggaatga attaacgcgc
       61 cagccaaccg ccatccacag caatggtata accatttaca taatctgaag cgctggaggc
      121 aagaaacact accggcccca tcaggtcact cggcagtccc caacggccag ctggaatgcg
      181 gtcgagaatt tccgcgctac gttgttcatc tgcccgcagt tgttgggtat tgttggtcgc
      241 catgtaaccc ggagctatcg cattaacatt aatgttgtgt ttagcccatt cgtttgccat
      301 caatcgcgtc acacccatca cgccgctttt tgatgcggta taagaaggca cacagatccc
      361 gccctggaag gagagcattg acgcgatatt gataatcttg ccgccattgc cttgcgcgat
      421 aaagtgtttc gccgctgcct gagacatgaa gaatacgctc ttgatattca ggttcatgac
      481 atcgtcccag tctttttcgc tgaactcgag agcgtcttcg cggcgaatca atccggcgtt
      541 attcaccagg atatcaatat gaccaaattc agctaccgcg cgatccagca gtccaggaat
      601 gccatcaatc tttcgcagat cggcggtcag gcttaaaaaa cgacgcccca gcgccgtgac
      661 ctgctcgata gtttcagtcg gttcaacgat gttaatgcca acaatgtcac agcccgcttg
      721 cgccagcccc aacgccatcc cctggcccag cccagtatca caaccagtga cgaccgcaac
      781 tttaccttcg agagaaaatg cacttaaaat cataacaaca ccttattcgt ttatgcccac
      841 aactagcgca aatctttaac ggccacatgg tccatatcat taaagacctg gttttcaccg
      901 accatgcccc agataaaagt ataagctttg gttccgacgc cggaatggat cgaccagctc
      961 ggggagatca ccgcctgctc gttatgcatc acaatgtgac gcgtttcttg cggctgcccc
     1021 atcatgtgga aaacgcaggc gtcatcatcc atattgaaat agaaataaac ttccatccgg
     1081 cgctcgtggg tgtgacacgg catggtgttc cacaagttac ctggagccag ctccgtcagc
     1141 cccatactca attgacaggt ttccagtaca tccgggacaa aatatttgtt aatcgtgcga
     1201 cggttactgg tgaggttatc gcctaacgtg actggagata cttcgtccgg tgtgactttt
     1261 ttggtgggat acgtcgtatg cgcgggtgcg caattgtaat aaaacttcgc cggagtggcg
     1321 gtatcaatac tggcaaagac aacttctttt gcacctttac caacatacag ggcgtcgcgg
     1381 tgaccgattt catagcattg accatcgaca gtaatcgtac cggcaccgcc aatattgata
     1441 acacctaact cgcgacgttc aaggaaatag cttacgccga gttgtttacc aacttccccg
     1501 ccaacggaaa ccgttttagt tatcggcata atgccgccaa caataattcg gtcaatgtgg
     1561 ctgtaaacca tggtgtactc atcggcgaca aatacctttt caaccaaaaa ttcattgcgc
     1621 agcccttggg tatccagcgt ttttgcgtgc gcactgtgga tgctctgtct tacgtccaca
     1681 tcaacctccg ataatcagtg aagcgtgaaa atagaaaacg atagtgaaac actgtttcgt
     1741 tttctctata aagggatgat atgcccatgc gatagggttt tcaattaaaa ataaaataat
     1801 gtttcatttt aagttaagga ttaaaaaaag tgcagtttcg atcacgaata tgccatgaga
     1861 atggaaaaat gagggagccc agaaaatgta tgtcgacttg ccagccatca ttattcaaca
     1921 gattaatgac ggcagatatt tatcggtaag gaggaaatgc agagctactc gtcacgttca
     1981 atggtcaatg ccacgccctg gcccccgccg atacaaagcg ttgccagccc tttgcgggca
     2041 ttacgtttca ccatttcatg aaccagagaa accaggattc ggcaaccgga agcgcctatc
     2101 gggtgaccga gtgcgatcgc gccaccattg acattgatcc gacgctcatc ccactcaagc
     2161 atcttgccaa ccgaaagcgc ctgtgcagca aacgcttcat tagcctcgat aagatcgaca
     2221 tcagccaact gccagcctac acgctccagg caacggcggg tcgcatacac cggcgcaatt
     2281 cccatcaatg ccggatctac accaacgctg gcaaatgcgc ggatgcgggc cagcacgggt
     2341 aaattcaacg ctcgtgcttt ggcttcgctc atcatcatta ccgcagctgc gccatcgttt
     2401 atggatgatg cattccccgc ggtcacagaa ccgagactat caaatgaagg atttaaacgg
     2461 gctaaacctt ctgcactggc gtcagtgcgt ggctgttcat cggtatcaac aaccaacgtc
     2521 tgcccgttac tttgggtcat taccgggacg atctcatctt taaatcgtcc ggcgtcaatc
     2581 gccgctcgcg ctttttgttg cgagctaagt gcgtaagcat cctgcaactg acggctgatg
     2641 ccatattcgc gagccagatt ttcggcggtg acaccaatat gataatcatt gaaggcatcc
     2701 cacaacccat catgcacaag actgtcaacc aactggctat tgccaagctg tgcaccggtg
     2761 cgactatcag tcagaacatg tggtgcacag ctcatgtttt cctggccacc ggcgatgaca
     2821 atatcagcct cgccacactg tatcgcctga gtagccagat gcagtgcttt aagcccggaa
     2881 ccgcagacgt cattaatcgt gattgcagaa acgctattag gcagaccacc tttaatagcc
     2941 gattgccttg ccggattctg ccctgccccc gcagtcaaca cctgaccaag aattacttca
     3001 tccaccgcat atgcaggaac gccggtacgt tctattaacg ctttcacgac cagactacca
     3061 agttccacgg cggaatgacc cgctaacgca ccacgaaagc agccgatagg tgtccgtaac
     3121 gccccgacaa tcacaacgtc tttcatcaca acctcgcacc aattaacagt gcaatagtaa
     3181 atgattgtta attacagtta tcttaattgt ttaaaaaaag tgatttttat cacaaaggaa
     3241 atatgcctga gcagcagtca aagacataac tggcacgtaa ggtttgcaac cactaaccca
     3301 ccaatagagg ggtagatagg gcgttaatct cccatactta acctggttta tggtaaattg
     3361 ccctccattt tgtttaattt gtagatgata cgttcagata atgtctaata tttggtctaa
     3421 agaagaaact ctgtggagtt tcgcgctcta cggcacagcc gttggtgcag gcacgctctt
     3481 ccttcctatt cagttaggtt cggcaggggc tgtggtcctg tttattactg ctctggtcgc
     3541 ctggccttta acatattggc cacataaagc tttatgccag ttcatcctct catcgaaaac
     3601 atcagcaggt gaagggataa cgggcgcggt aacacactac tatggcaaga agattggtaa
     3661 tctgattacc acactgtact tcatcgcctt ttttgtcgtc gtgttgatat atgcagtggc
     3721 tattaccaac tcacttacgg aacagttggc aaagcatatg g
//
LOCUS       DAJVTL010000243         3662 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.245, whole genome shotgun sequence.
ACCESSION   DAJVTL010000243 DAJVTL010000000
VERSION     DAJVTL010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.245"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(327..2396)
                     /gene="glyS"
                     /locus_tag="OQQ26_004318"
     CDS             complement(327..2396)
                     /gene="glyS"
                     /locus_tag="OQQ26_004318"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HCS1859539.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGT
                     VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQIVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
                     LEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV
                     ADISLLQ"
     gene            complement(2406..3317)
                     /gene="glyQ"
                     /locus_tag="OQQ26_004319"
     CDS             complement(2406..3317)
                     /gene="glyQ"
                     /locus_tag="OQQ26_004319"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HCS1859540.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            complement(3412..>3662)
                     /locus_tag="OQQ26_004320"
     CDS             complement(3412..>3662)
                     /locus_tag="OQQ26_004320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YsaB family lipoprotein"
                     /protein_id="HCS1859541.1"
                     /translation="CSTPSPVQKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDV
                     TAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
BASE COUNT          837 a          995 c          944 g          886 t
ORIGIN      
        1 ttcaaaaggg tattttggct ttgacatatc aggggctatt ccatttcatc gtccaacaaa
       61 atgggtgcag tacacttgat ttatagtcag gtggggcttt tctctgtctg cctttcggtg
      121 aatacctgag acaaacagtc tcaagcaccc gtggctattc tagcttaata agtttgtttc
      181 ttctccttga tataatccta aaaaaatctc ataaaattaa tatatgagat aatctttatt
      241 cagcagaaga ttattaaagg ttgctgtatt atttagcgat aataaaaaaa gcctgccaga
      301 tggcaggctt tttaataacg gcgttattac tgcaacagcg aaatatccgc aacgcgcagg
      361 aacagttcgc gcagtttctc cagcatggtc agacggttga gacgcaattc tttgtcatca
      421 accatgacca tcactttatc gaagaaagca tcaaccggct cacgcagctc tgccagttcg
      481 accagcgcat cctggtaacg accttccgca aagtacggct ccagcttgtc acgtagcacc
      541 acaacctgca tcgccagttt aatttcttcc ggctctttca gggtagaggc attcacgcgg
      601 tcgctcagca cttcgtcaga tttcgccaga atgttagata cacgtttgtt cgccgccgcc
      661 agtgcagcag ctgcatccag ggtacggaaa tgcgataccg ctttcatacg ggcatcgaaa
      721 tcagccggac gagtcggacg acgcgccagt accgcctgga tggtgtcaac ggtgtaacct
      781 tcgtcctgat accaggcgcg gaagcgaccg agcataaagt cgataacatc atcaaccacg
      841 ttggcgttag tcagcttatc gccatacaga cgcactgctt cttcggtcag cgtttgcaga
      901 tcaaggttga ggttcttctc aacgataatt cgcagcacgc caagtgcggc acgacgcagc
      961 gcaaacgggt ctttgtcgcc tttcggatgc tgaccgatac cgaagatacc cgccagagta
     1021 tccatcttat cagcaatcgc cagcgcacaa gctaccgggt tggacggcag gtcatcaccg
     1081 gcaaagcgcg gctgatactg ctcattcagc gcgacggcta cgtcttccgc ttcgccatcg
     1141 tgacgcgcgt agtgcatccc cataacgcct tgggtgtcgg tgaactcgaa gaccatgttg
     1201 gtcatcaggt cacacttaga cagcaggccc gcacgggttg cgtggttaac gtcagcgcca
     1261 atctgttcag caatccagcc agccagcgcc tggatgcggt cagttttgtc acgcagcgta
     1321 cccagctgtt gctggaacag cacgatttgc aggcgcggca ggttatcttc cagacgtttt
     1381 ttacggtcgg tattgaagaa gaactcggca tccgccagac gtggacgaac gactttctcg
     1441 ttaccagaga taatttgctg cggatctttc gattcaatgt tggcaacgaa gatgaagttc
     1501 ggcagcagtt tgccatcgtt cgcatacacc gggaagtatt tctggtcacc tttcatggtg
     1561 taaaccaggg cttcagccgg caccgcgagg aatttctctt cgaattttgc ggtcagaacg
     1621 accggccact ccaccagcga agccacttct tccagcaggc tttcgcttaa gtcagcgtta
     1681 ccgccaatct tacgcgctgc ttcttcggca tcggctttaa tcttcgcttt acgttcttcg
     1741 taatcggcga tgactttccc gcgctcacgc agaatttccg gatactgatc ggcgttgtcg
     1801 atggtgaatt ccggttcgcc cataaagcgg tggccgcgaa tcacgcgatc ggactgaatg
     1861 cccagaatgg ttgccggaat gactttgtcg cccagcagca gggtcacggt gtgcaccgga
     1921 cgcacgaagt gcacgtcgct tgcaccccag cgcatcagtt tcgggatcgg cagtttcgcc
     1981 agcgaagtcg caaccatatt cggcagtagt gcttcagtgc tttcgccctt cacatgggcg
     2041 cgatacagca gccattcgcc tttatcggta gtcagacgct cagcctggtc aacggtaata
     2101 ccgcaaccac gcgcccaacc ttctgccgct ttgctcggtt tgccttcagc gtcgaacgcc
     2161 tgggcaatcg ccgggccgcg tttttcgatt tcacgatctg gttgcgcttc cgccaggtta
     2221 gctactttca gcgccagacg acgcggagca gcaaaccatt gaacggtgcc gtgtgcgagg
     2281 ccagcgttat ccagctccgc agtaaagttc gcagcaaagg actcagccag gctgcgcagt
     2341 gcttttggtg gcagctcttc agtgccgatt tccaccagaa aagttttctc agacatagcc
     2401 gcctcttact tatctttgtt gcacatcggg aagccgaggg cttcacggga agcgtagtat
     2461 gcttctgcca ctgctttggt cagggtgcga atgcgcagaa tgtagcgctg acgctcagtg
     2521 acggagatgg ctttacgcgc atccagcagg ttgaagctgt gggcggcttt cagaatacgc
     2581 tcgtaggctg gcagcggcag cggattttcc agcgccagca gctgctgcgc ttctttctcg
     2641 tactgctcga agcaggtgaa caggaaatcc acatccgcgt attcgaagtt gtaagtggac
     2701 tgctccactt cgttctgatg gaacacgtcg ccataggtgg ttttacccag cgggccgtcg
     2761 ctccagacca ggtcgtaaac gctgtctacg ccctgaatgt acatggccag acgttccaga
     2821 ccgtaggtga tctcgccggt aaccggttta cactccagac caccaacctg ctggaagtaa
     2881 gtgaactgcg tcacttccat gccgtttagc cacacttccc agcccagtcc ccaggcaccc
     2941 agagtcgggt tttcccagtt atcttccacg aaacggatgt cgtgaatagt cgggtccatg
     3001 cccagctctt tcagagaacc gaggtacagc tcctgaatat tgtccggcga tggcttaatg
     3061 accacctgga actgatagta gtgctgtaaa cggttggggt tttcgccgta gcgaccatcg
     3121 gtcgggcgac gagaaggctg aacataagca gccgccatcg gttctggccc cagcgcgcgc
     3181 agacaggtca ttgggtgaga ggttcccgcg ccgacttcca tgtccaatgg ttgaacaatg
     3241 gtgcagccct ggcgagccca gtaatcctgt aaggtcagga tcaagccctg gaaggtcctg
     3301 gtatcaaact tttgcatatt atttcgtgct ggatacgtgt ggatttaaag gaagggatca
     3361 gtatacccgc tggatggaag atatacagta cgaaacggga aaaagcaggg cttaacgcat
     3421 ggaaagatgc aaaaaatggc catctgcgtc aaaagaacag acaaactgct ctttacggaa
     3481 ggtataaccg cgcatttcat agcttccctg gaactgttcg aaggcggtga cgtcgatttt
     3541 ttgctcaccg gtgttataac gttttgccgc ctgatccttg cataacgctt ccatattcaa
     3601 cgaacgcaga ggatcaacct ttacccgttg tgctttctgc acgggtgacg gtgtagaaca
     3661 ac
//
LOCUS       DAJVTL010000244         3660 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.246, whole genome shotgun sequence.
ACCESSION   DAJVTL010000244 DAJVTL010000000
VERSION     DAJVTL010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3660
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.246"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            269..1639
                     /gene="glmU"
                     /locus_tag="OQQ26_004321"
     CDS             269..1639
                     /gene="glmU"
                     /locus_tag="OQQ26_004321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HCS1859542.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            1801..3630
                     /gene="glmS"
                     /locus_tag="OQQ26_004322"
     CDS             1801..3630
                     /gene="glmS"
                     /locus_tag="OQQ26_004322"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HCS1859543.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIVVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEIP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
BASE COUNT          905 a          904 c          994 g          857 t
ORIGIN      
        1 tagatcctgc tgatataaaa cacccctgtt ttcccgttta ttcattgatc gaaataagag
       61 caaaaacatc cacctgacgc ttaaatgaag gtactgcctt aattttctgc agacaaaagg
      121 cgtgacgatg gtcgaaaatg gcactttcgt cagcggggat aatccgttat tgaacaattt
      181 atcctctgtc catttcacga tgaaaaaaat gtagtttttt caaggtgaag cggtttaaat
      241 tcgttctcaa attacagtca ggacgcgtat gttgaataat gctatgagcg tagtgatcct
      301 tgccgcaggc aaaggcacgc gcatgtattc cgatcttccg aaagtgctgc atacccttgc
      361 cgggaaagcg atggttcagc atgtcattga tgctgcgaat gaattaggcg cagcgcacgt
      421 tcacctggtg tacggtcacg gcggcgatct gcttaaacag gcgctgaaag acgacaacct
      481 taactgggtg cttcaggcag agcagctggg tacgggtcat gcaatgcagc aggccgcacc
      541 tttctttgcc gatgatgaag acattttaat gctctacggc gacgtgccgc tgatctctgt
      601 cgaaacactc cagcgcctgc gtgatgctaa accgcagggt ggcattggtc tgctgacggt
      661 gaaactggat gatccgaccg gttatggacg tatcacccgt gaaaatggca aagttaccgg
      721 cattgttgag cacaaagatg ccaccgacga gcagcgtcag attcaggaga tcaacaccgg
      781 cattctgatc gctaacggcg cagatatgaa acgctggctg gcgaagctga ccaacaataa
      841 tgctcagggc gaatactaca tcaccgacat tattgcgctg gcgtatcagg aagggcgtga
      901 aatcgtcgcc gttcatccgc aacgtttaag cgaagtagaa ggtgtgaata accgcctgca
      961 actctcccgt ctggagcgcg tttaccagtc cgaacaggct gaaaaactgc tgttagcagg
     1021 cgttatgctg cgcgatccgg cgcgttttga tctgcgcggt acgcttactc acgggcgcga
     1081 tgttgaaatt gatactaacg ttatcatcga gggcaacgtg actctcggtc atcgcgtgaa
     1141 aatcggcacc ggttgcgtga ttaaaaacag cgtgattggc gatgattgcg aaatcagtcc
     1201 gtataccgtt gtggaagacg cgaatctggc agcggcctgt actattggcc cgtttgcccg
     1261 tctgcgtcct ggtgctgagt tgctggaagg tgcacacgtt ggtaacttcg ttgagatgaa
     1321 aaaagcgcgt ctgggtaaag gctcgaaagc cgggcatctg acttacctgg gcgatgcgga
     1381 aattggcgat aacgttaaca tcggcgcggg aaccattacc tgcaactacg atggtgcgaa
     1441 taaatttaag accattatcg gcgacgatgt gtttgtcggt tccgacactc agctggtggc
     1501 cccggtaaca gtaggcaaag gcgcgaccat tgctgcgggt acaactgtga cgcgtaatgt
     1561 cggcgaaaat gcattagcta tcagccgtgt gccgcagact cagaaagaag gctggcgtcg
     1621 tccggtaaag aaaaagtaat tctggccggg taatccggtc atctgggatg aggagataac
     1681 ataatctccc tcccacaagc agtaactata aaaataaccc cactctctac aaggctcggg
     1741 gtgcccgaaa aaacgggcat acaggttgac cgacaacgat ataaatcgga atcaaaaact
     1801 atgtgtggaa ttgttggcgc gatcgcgcaa cgtgatgtag cagaaatcct tcttgaaggt
     1861 ttacgtcgtc tggaataccg cggatatgac tctgccggtc tggccgttgt tgatgcggaa
     1921 ggtcatatga cccgcctgcg tcgcctcggt aaagtccaga tgctggctca ggcagcggaa
     1981 gaacatcctc tgcatggcgg caccggtatt gctcacactc gctgggcgac ccacggtgaa
     2041 ccttcagaag ctaacgcgca tccgcatgtt tctgaacaca ttgtggtggt gcataacggc
     2101 atcatcgaaa accatgaacc gctgcgtgaa gagttaaaag cgcgtggcta taccttcgtt
     2161 tctgaaaccg acaccgaagt gattgcccat ctggtgaact gggagctgaa acaaggcggt
     2221 actctgcgtg aggctgttct gcgtgctatc ccgcaactgc gtggtgcgta cggtacagtg
     2281 attatggact cccgtcaccc ggataccctg ctggcagcac gttctggtag cccgctggtg
     2341 attggtctgg gtatgggcga aaactttatc gcttctgacc agctggcgct gttgccggtg
     2401 acccgtcgct ttatcttcct tgaagagggc gatattgcgg aaatcactcg ccgttcggta
     2461 aacatcttcg ataaaactgg cgcggaagta aaacgtcagg atatcgaatc caatctgcaa
     2521 tatgacgcgg gcgataaagg tatttaccgt cactacatgc agaaagagat ctacgaacag
     2581 ccgaacgcga taaaaaacac ccttaccggg cgcatcagcc acggtcaggt tgatttaagc
     2641 gagctgggac cgaacgccga cgaactgctg tcgaaggttg agcatattca gatcctcgcc
     2701 tgtggtactt cttataactc cggtatggtt tcccgctact ggtttgaatc gctggcaggt
     2761 attccgtgcg acgtcgaaat cgcctctgaa ttccgctatc gtaaatctgc cgtgcgtcgt
     2821 aacagcctga tgatcacctt gtcacagtct ggcgaaaccg cggataccct ggcgggcctg
     2881 cgtctgtcga aagagctggg ttaccttggt tcgctggcaa tctgtaacgt tccgggttct
     2941 tctctggtgc gcgaatccga tctggcgctg atgaccaacg cgggtacgga aatcggcgtg
     3001 gcgtccacta aagcattcac cactcagtta actgtgctgt tgatgctggt ggcgaagctg
     3061 tctcgcctga aaggtctgga tgcctccatt gaacatgaca ttgtgcatgg tctgcaggcg
     3121 ctgccgagcc gtattgagca gatgctatct caggacaaac gcattgaagc tctggcagaa
     3181 gatttctctg acaaacatca cgcactgttc ctgggccgtg gcgatcagta cccaatcgca
     3241 ctggaaggcg cattgaagct gaaagagatc tcctacattc acgctgaagc ctacgctgct
     3301 ggtgaactga aacacggtcc gctggcgctt attgatgccg atatgccggt tatcgtcgtt
     3361 gcaccgaaca acgaattgct ggaaaaactg aaatccaaca ttgaagaagt tcgcgcgcgt
     3421 ggcggccaat tgtatgtctt cgccgatcag gatgcgggtt ttgtaagtag cgataacatg
     3481 cacatcatcg agataccgca tgtggaagag gtgattgcac cgatcttcta caccgttccg
     3541 ctgcagctgc tggcttacca tgtcgcgctg atcaaaggca ccgacgttga ccagccgcgt
     3601 aacctggcaa aatcggttac ggttgagtaa tcactatcat agataaaaaa gggctgccga
//
LOCUS       DAJVTL010000245         3643 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.247, whole genome shotgun sequence.
ACCESSION   DAJVTL010000245 DAJVTL010000000
VERSION     DAJVTL010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.247"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..872)
                     /gene="xylB"
                     /locus_tag="OQQ26_004323"
     CDS             complement(<1..872)
                     /gene="xylB"
                     /locus_tag="OQQ26_004323"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HCS1859544.1"
                     /translation="MYIGIDLGTSGVKVILLNEQGEVVASQTERLTVSRPHPLWSEQD
                     PEQWWQATDRAMKALGDQHSQQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
                     QECALLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
                     TGEFASDMSDVAGTMWLDVAKRDWSDVMLQACHLSRDQMPALYEGSEITGALLPEVAK
                     AWGMAAVPVIAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHS
                     FCHALPQRWHLMSV"
     gene            complement(944..2266)
                     /gene="xylA"
                     /locus_tag="OQQ26_004324"
     CDS             complement(944..2266)
                     /gene="xylA"
                     /locus_tag="OQQ26_004324"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HCS1859545.1"
                     /translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHD
                     VDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
                     HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
                     HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAACMIEDGELDKRIAQRYSGWNS
                     ELGQHILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLENLVNHYLFDK"
     gene            2632..3624
                     /gene="xylF"
                     /locus_tag="OQQ26_004325"
     CDS             2632..3624
                     /gene="xylF"
                     /locus_tag="OQQ26_004325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HCS1859546.1"
                     /translation="MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDR
                     DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA
                     KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN
                     AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVAS
                     NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAE
                     IAVELGNGQEPKADTSLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL"
BASE COUNT          990 a          935 c          822 g          896 t
ORIGIN      
        1 attacagaca ttaaatgcca acgctgcggt agcgcatggc aaaagctgtg tacggcgctt
       61 tctggcttgc ttaaaaaccc ttcgctgaca gcaaaataga cccccgacgt ccccagcgat
      121 aacattgcct gattagcatc aaccattccc acaccaaccg caccagctgc attgtcgcca
      181 ccgcctgcga taactggcac agccgccata ccccacgctt tcgcaacttc aggtaacaaa
      241 gcaccagtaa tttcgctgcc ttcgtataat gctggcatct ggtcacgaga taagtggcaa
      301 gcctgcagca tgacgtcact ccagtcacgc tttgcaacat ccagccacat ggtgccagct
      361 acgtcagaca tatcgctggc aaactccccc gtcatacgca gacgcaagta atctttcggt
      421 aataatactt tgtcgatttg acggaatatc tccggctcat gccgctgaac ccatagcaat
      481 ttaggcgcag taaatccggg catcatcagg ttgccggtaa tcaccctcga ttgcggaact
      541 cgcgcttcca gcaaagcgca ctcttgcgca cagcgcccgt cgttccacaa aatggcaggg
      601 cgcaataccc gttgttgagc atccagtaag gttgctccgt gcatctggcc ggcaataccc
      661 aatgctttaa cgtcctgctg agaatgctga tcgcccagag ctttcattgc gcgatcagtt
      721 gcctgccacc actgttccgg gtcttgttcc gaccagagtg gatgcgggcg cgaaacggtc
      781 agcctttccg tttgcgaagc aaccacctca ccctgctcgt tgagcaaaat aacttttacg
      841 cccgaggtgc caagatctat cccgatatac atatcgatcg ttccttaaaa aaatgcccgg
      901 tatcgctacc gataaccggg ccaacggact gcacagttag ccgttatttg tcgaacagat
      961 aatgatttac cagattttcc agttgctcct ggcgaccact ctgatgcacc ggagacaaat
     1021 tatgttcctg agcatatttg gctaaatctg ccagtgacat ttggcctttc aggatatgct
     1081 ggcccaattc gctattccag ccggaataac gctgcgcgat gcgtttatcc agttcgccat
     1141 cttcaatcat gcacgctgca attttcagcg ccagtgccat cgtatccatc gcgccgatat
     1201 gaccgtaaaa cagatcatat ttatcagtac tttgacgacg tactttggca tcgaagttca
     1261 gaccaccggt ggtgaaaccg cctgctttga gaatttcata catcaccagc gcattctctt
     1321 ccacactgtt cgggaactgg tcggtgtccc agcccagttg cgcatcgcca cggttggcgt
     1381 cgacagaacc gaacagacca agcgcaatgg cggtggctat ttcatgatgg aaagagtgac
     1441 ctgccagcgt cgcgtggtta gcttcaatgt tcagtttaat ctctttttcc agaccaaact
     1501 gtttcaggaa gccatagacc gtcgcggcat cgtaatcata ttgatgtttg gtcggttctt
     1561 gcggtttcgg ttcgataagc aacgtgccct ggaaaccgat tttatgttta tgctcaacca
     1621 ccatctgcat aaagcggccc agctgttcac gctcctgacg caagtcggta tttaacagcg
     1681 tttcgtaacc ttcacgaccg ccccacagga catagttttc accgcccaat ttatgggttg
     1741 cttccatcgc tgtaacaact tgcgttgccg cccaactgaa gacttcagga tctgggttcg
     1801 tcgccgcacc cgcgccatag cgagggtttg taaagcagtt agcggttccc cacagcagct
     1861 tcacgccgct ctcttcttgc ttgcctgcca ggacatcaac catttgcgca aaattattga
     1921 tgtactcttt taacgacgcg ccctcagggg aaacatccac atcgtggaag caataaaatg
     1981 gcacatgtaa cttgtggaaa aactcaaatg cgacatctgc tttacgcttc gccaacgcca
     2041 gtgcctcacc aggctgctgc cacggacgat taaacgcccc cacaccaaac atatccgccc
     2101 cgttccagca gaaggtgtgc cagtagcagg cggcaaaacg caagtgctct tccatacgct
     2161 tacccaacac cagttcgtcg ggattgtagt gacggaatgc taacgggttt gaggattttg
     2221 agccttcata acgaacgcga tcgagctggt caaaataggc ttgcatattg aactccataa
     2281 tcaggtaatg ccgcgggtga tggatgatgt cgtaatattg ggcactccct ttcagttgct
     2341 caattatgtt atttcacact gctattgaga taattcacaa gtgtgcgctc gctcgcaaaa
     2401 taaaatggga tgatgaaact gggtaattcc tcgaagagaa aaatgcaata agtacaattg
     2461 cgcaacaaaa gtaagatctc ggtcataaat caagaaataa accaaaaatc gtaatcgaaa
     2521 gataaaaatc tgtaattgtt ttcccctgtt tagttgctaa aaattggtta cgtttatcgc
     2581 ggtgattgtt acttattaaa gctgtcctct aactacagaa ggccctacac catgaaaata
     2641 aagaacattc tactcaccct ttgcacctca cttctgctta ccaacgttgc ggcacacgcc
     2701 aaagaagtca aaataggtat ggcgattgat gatctccgtc ttgaacgctg gcaaaaagat
     2761 cgagatatct ttgtgaaaaa ggcagaatct ctcggcgcga aagtatttgt acagtctgca
     2821 aatggcaatg aagaaacaca aatgtcgcag attgaaaaca tgattaaccg gggtgtcgat
     2881 gttcttgtca ttattccgta taacggtcag gtattaagta acgttgtaaa agaagccaaa
     2941 caagaaggta ttaaagtatt agcttacgac cgtatgatta acgatgcgga tatcgatttt
     3001 tatatttctt tcgataacga aaaagtcggt gagctgcagg caaaagctct ggtcgatatt
     3061 gttccgcaag gtaattactt cctgatgggc ggctcgccgg tagataacaa cgccaagctg
     3121 ttccgcgccg gacaaatgaa agtgttaaaa ccttacgttg attccggaaa aattaaagtc
     3181 gttggtgacc aatgggttga tggctggtta ccggaaaacg cattgaaaat tatggaaaac
     3241 gcgctaaccg ccaataataa caaaattgat gctgtagttg cctcaaacga tgccaccgca
     3301 ggtggggcaa ttcaggcatt aagcgcgcaa ggtttatcag ggaaagtagc aatttccggc
     3361 caggatgcgg atctcgcagg tattaaacgt attgctgccg gtacgcaaac tatgacggtg
     3421 tataaaccta ttacgttgtt ggcaaatact gccgcagaaa ttgccgttga attgggcaat
     3481 ggtcaggagc caaaagcaga tacctcactg aataatggcc tgaaagatgt cccctcccgc
     3541 ctcctgacac cgatcgatgt gaataaaaac aacatcaaag atacggtaat taaagacgga
     3601 ttccacaaag agagcgagct gtaagcgtta cgccccggcg cgg
//
LOCUS       DAJVTL010000246         3590 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.248, whole genome shotgun sequence.
ACCESSION   DAJVTL010000246 DAJVTL010000000
VERSION     DAJVTL010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.248"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(300..596)
                     /locus_tag="OQQ26_004326"
     CDS             complement(300..596)
                     /locus_tag="OQQ26_004326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415767.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HCS1859547.1"
                     /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
     gene            1154..1836
                     /locus_tag="OQQ26_004327"
                     /pseudo
     CDS             1154..1836
                     /locus_tag="OQQ26_004327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001723372.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1850..2395)
                     /locus_tag="OQQ26_004328"
     CDS             complement(1850..2395)
                     /locus_tag="OQQ26_004328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001719982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1859548.1"
                     /translation="MANIGYIQVSSIQQITDRQLERVVLDKIFTDKASGKNTDRPQLK
                     AMLDYVREGDVIHVHDLSRLGRSTVDVLTLVDKLSQKGIKVHFHKEGLITGDDNPTSK
                     MILTIFSAVAEAERKMMLERQREGYEAAKAAGRVVGRGNGKAVDREGIKAALAAGSSI
                     AKVAAQFNVAKSTVQRIKAED"
BASE COUNT         1136 a          685 c          729 g         1040 t
ORIGIN      
        1 tgatacctct gtaaccacaa ttttgtttaa ttatctcaac gtgcacattt tctgaacata
       61 catgcagcac gtgaatgtgt taaacaatag tagatgactt tatctgaagt aatcaaaggt
      121 tttgagtgag caactctgcg tcaggaaagg gcatttttcc tgaatatgct cacatcatat
      181 aaagaaatac agataaagtt attatctgct tgtggtggtg aatgcactga ccggctataa
      241 ggaaaggcca aacaagaaca cggttgcaaa aaccgtgctc ttaaatattg aacctctatt
      301 cagaacactt tcttaaatgg tttcactgaa acgtgttcat agacacctgc cgctacgtac
      361 gggtcagcat cggcccaggc ctgagctgct tccagcgatt caaattcagc aataacggtt
      421 gagccagtaa atcccgcagc ccctggatcg ttactgtcta ccgctggcat tggaccagct
      481 gtcaacaaac gaccttcatc atgcagtaac tgtaaacgtg ctaaatgtgc cggacgaacg
      541 gaaaggcgtt tttcgaggct atcagctttg tcttgagcgt aaataacata caacacgggc
      601 acaactcctt gttcgggaaa gttgtaaagt acgttatttg aaagggcgaa gatctgcaac
      661 ggaaagatga tgtctttgtt aagaccatgc ataaagtaag gtcaattacg ccaaaaatga
      721 cattttcact gatcctgatc gtcttgcctt attgaatatg attgctattt gcatttaaaa
      781 tcgaggcctg gtttttctac tgaaatgatt atgacttcaa tgacccttga ataaagtcta
      841 ttcggttttc taagagacct gttattaaca ggctttatca tgtgaatgac tatgcaattt
      901 aatggtggat ttccaagttt ataagcagtt ctacacagaa tccatgcagt atcttacaag
      961 cccctacacc acctctaaat aacctaactt attgaaatat ataaagaata tatgaagtct
     1021 cttttcagga aactatgcag ggtgttagtc atccctctct cgacttctat aaaattgcta
     1081 tttacaggtc tatctaactg attggattcg cattaaaatt tctcaaacca gagttttcta
     1141 tggagcagta attgtgagta gtgaagaaag tatcacggaa tcagttaagc aggcgttgaa
     1201 ggaacgagta gctaaccctt tatggggcta catcattttg tcatgggtgg gatttaactg
     1261 gaaaagcatt gctatcatgt gtcttagtga ggcttcggtt gttactcgta ttcaacaaat
     1321 cacatcgacg gaagacttct atctaaaaac attatgctat cccgtagggc tagggttcat
     1381 tttggcgacc tttttccctt acttcagcaa ccttgtaaca ctacttcaaa tcaaggcaac
     1441 cgcatggcga gcaagacaaa aagtagaagc tgaaaatctt gaagagtcag ctagactgac
     1501 gtcaaagttg aagattgaga aacaaaaaac cttatcgaaa gagaaaaaga agatacaagt
     1561 aatttgaaat ctcaggcaga gaaattggcg acagatatag ataacttaaa tgcggagata
     1621 ggaaagttag agaatcaaaa aaagcacttg tctcgtgaac ttgatttcct gcaacaagat
     1681 gttatgtcta ttgaagacct gatttcaaaa cttgttgcgg atgagtgttc tattgatgag
     1741 tacagaagcg aattaaaaaa acttgttagc ccagaaataa tgatgcaagc aagaaaccgt
     1801 aagaatctcc caagtttatt tggaagaaaa atctaatgta tttcctgact taatcttcag
     1861 ctttaatacg ctgtacagtt gacttggcaa cgttgaattg agcggctact ttagcgattg
     1921 aactaccagc agcaagagca gctttaatac cttctctgtc aaccgcttta ccgttacccc
     1981 ttccaactac acgaccagca gctttagcag cttcatagcc ttctcgttga cgctcaagca
     2041 tcattttacg ttcagcttca gccactgctg aaaagattgt gagaatcatc ttagacgtgg
     2101 ggttatcgtc accagttatc agaccttctt tgtgaaagtg gaccttgata cctttctgtg
     2161 aaagtttatc caccagcgtt aatacatcca cggtagaacg ccctaaacgt gacaagtcgt
     2221 gtacatggat aacatcacct tcacgaacat aatcgagcat agcctttagt tgtggacggt
     2281 ctgtattctt cccagatgct ttatcagtaa atatcttatc cagtacgacc ctttcaagtt
     2341 gacggtctgt aatctgctgg attgatgaaa cttggatata accaatgtta gccataatat
     2401 actcatttgc cttactcatt tgatgagttg agtataacgt gccgataaag tgttttacaa
     2461 ggctaatcgg tatggttttt acagggggtt agctatacct ttttagtatg ctataacggt
     2521 atgcctaaga gatggagaaa tctttatagc aatttacatg gaaagtcaat agatatttta
     2581 aaattctgca agggaggtca catggctggt gcgacgggta cttagcagct acagacatcc
     2641 tagacagttg attcggttag ttgggcttgt accaacccct aatcaacctc atagatattt
     2701 tcgaagattt tcagggaggg gatatataga aggggttagt catttttata aaaaaattca
     2761 gaagctgaat aagtactgta taaaatttat gcaactctgc caagacttat agaaagctct
     2821 gtagcgagtt ttaaccccat ttttaggggt agtctatagg gattaccacc caccttaaaa
     2881 taagggggta aaatcgctta gaatgcgtta cagagcgtct gagaagccat attcacagat
     2941 tttactaaaa cctcagactt ctaagtagcc tttttaacag gagggttccc ctatggtcac
     3001 tatatccctc tcttcccact aagtgagcta cacagaccta gagaatatgc cttcatagta
     3061 tctatatcag gtcaacttca gaggtcttga tagaatcttc aaaggcactt gacagataac
     3121 tattaactat gaagttgcta ggaaggggtg tttaacggga gaagagatac gatataaccc
     3181 gaaggggaga ttatcatctt aacagagaag ttttaagagt aaactaaaaa ggacttaaca
     3241 gatgactacc tagataaagg gaacgatgaa accagaggta gtgacctgtt aaacagttcg
     3301 tttcaaagtc tcttaaaagt ctgttaatta aggtcatgtg aacaatctta ccattttgtc
     3361 aatacttttg tctttgacct aagtcaataa aatgtattga tatggtttta aacaaaatag
     3421 ctaaaaaatc tttttagagg ggcgcttcgc ttgaggtcac catgaatgat ttttctcccg
     3481 ttaagaggga ggttgcaggg acatttcaaa gccctgataa ggtaagcccg atgataacag
     3541 aaacagaggg caaaaccact tatcgaactg tgaacgaata acgtaaatgg
//
LOCUS       DAJVTL010000247         3561 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.249, whole genome shotgun sequence.
ACCESSION   DAJVTL010000247 DAJVTL010000000
VERSION     DAJVTL010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3561
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.249"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(280..489)
                     /locus_tag="OQQ26_004329"
     CDS             complement(280..489)
                     /locus_tag="OQQ26_004329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001505166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HCS1859549.1"
                     /translation="MFGISKKKTRRVVTEIKKFEKRDLAQAVIGVGVMVDFISRIMSA
                     LADSWGCGCGLPIDEKISNYLTCYL"
     gene            complement(856..2021)
                     /locus_tag="OQQ26_004330"
     CDS             complement(join(856..1775,1775..2021))
                     /locus_tag="OQQ26_004330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611553.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCS1859550.1"
                     /translation="MFFHPSCGRTTFAPFVTVDKGYSYRQASEAMNVGSTTLESWVRQ
                     LRRERQGIAPSAAPITPEQQRIRELEKQVRRLEEQNTIFKKGYRALDVRLTERFTIVS
                     RLSDSHSVVSLCSALGIHRSSYRYWRKRRDTVNSARVRLCSEIRRAWNQSRGSAGART
                     LAEMLTQNGVPMSRYRAGRLMKYLNLSSCQPGKHQYKNACQEHTCLPNLLERQFAVPE
                     PDRVWCGDITYIWAGNRWCYLAVVMDLFARRVIGWSLSANADTALISSALRMAYEVRG
                     QPRDVMFHSDQGSQYTGLKYQQLLWRYRIKQSVSRRGNCWDNSPMERFFRSLKTEWVP
                     TDGYVGKDEARQQISGYILNYYNSVRPHHYNGGLTPEESENRYRFYCKTVANIT"
     gene            2066..3502
                     /locus_tag="OQQ26_004331"
                     /pseudo
     CDS             2066..3502
                     /locus_tag="OQQ26_004331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001317305.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
BASE COUNT          890 a          939 c          866 g          866 t
ORIGIN      
        1 gggggttttc tgtgcacaaa aaacccctgt aaaaaactta caggggtata aggcttagcc
       61 taacttgcgt ctgttgcatg gtgccgggtg cctcccggtg aattcagtcg gtgtcactga
      121 acccgcgtag gcttcgctca taacataata aatgctatgt acaccagtcg ccccaccgca
      181 cagggggatt caccacacgg cgcacttttt aacaaatatc cctccggcca gacaataata
      241 aacacaatga attgtgatct tcttaacagt tttaaagtgt tacagataac atgttaagta
      301 attgctgatt ttttcatcaa taggaagacc acacccacaa ccccagctat cagccagagc
      361 cgacattatc cggctgataa aatctaccat cactccaaca ccaatcaccg cctgtgccag
      421 atcgcgtttc tcaaactttt taatctctgt taccactctg cgggttttct ttttggaaat
      481 accaaatatc gtgacgttta cttgggggat gagccatcaa gcgggaacga tctgcctaca
      541 gagaaagtca gtcagaccac tctgcaaatt atccccgaag gctctgtggc tgatatgcgc
      601 cgggcatggc gcaatgggcc agtggcagtg tgtgatggtg gcccttactg gatttgaacc
      661 agcgaccaag cgattatgag tcctcttacc actgagctaa agggttggag aacgcaatat
      721 cacctgtctt atatgattac acccagaatt tccctgactg tcttgtcaaa acattcagtc
      781 tccaattccc accaatagca agacggtcac tatgacagca tctccggaat gagctcagag
      841 cacggggtgt agtggtcaag taatattggc cacggtttta cagtaaaaac ggtatctgtt
      901 ctctgattct tccggcgtca acccaccgtt gtaatggtga ggcctgacgc tattgtaata
      961 attcaggata taaccgctaa tttgttgccg ggcttcgtcc ttgcctacgt aaccatccgt
     1021 cggcacccat tctgttttca gactgcggaa gaagcgttcc ataggactgt tatcccagca
     1081 gtttccccgt cggctgacac tttgctttat cctgtaacgc cagagaagct gttgatattt
     1141 cagtcctgta tactgacttc cctggtcgct atggaacatg acgtcccgcg gctgaccacg
     1201 cacctcatac gccatccgca aagcactgct tatcagtgca gtatcggcat tcgctgacag
     1261 gctccagccg ataaccctgc gggcaaaaag atccatgacg accgccagat agcaccagcg
     1321 atttcctgcc cagatatacg taatatctcc gcaccatacc ctgtctggct ccggtacagc
     1381 gaactgacgc tcgagcagat tcggcaaaca cgtatgctcc tgacaggcat ttttgtattg
     1441 atgttttccg ggctgacaac tgctcaggtt caggtatttc atcagccgtc cggcacgata
     1501 acggctcatc gggacgccgt tttgggtcag catttcagcc agcgtgcgcg cgcctgcaga
     1561 gccccggctc tggttccatg cccggcgtat ttcgctgcac aacctgacgc gagccgaatt
     1621 aaccgtatcg cgtcgttttc gccagtaccg gtaactgcta cggtgtattc ccagtgcgga
     1681 acagaggctg acaactgagt ggctgtcact cagtctggaa actatcgtaa accgttcagt
     1741 gagtcggaca tcaagagcgc ggtagccttt tttaatatcg tattttgttc ctccagtcgg
     1801 cgaacctgct tttccagctc gcgaatacgt tgctgttcag gggtaatggg tgctgcagag
     1861 ggcgcaatac cttggcgctc tcgcctgagc tgacgtaccc agctctcaag cgtggtagaa
     1921 ccgacattca tcgcctcact ggcttgtcga tacgaatagc ccttatcaac tgtcacgaac
     1981 ggtgcaaaag tggttcttcc gcaacttggg tggaagaaaa tggatgaaac tttctggtga
     2041 acaaagatct aagctgtttt aagtcatggg caactcaatg cactctctta agacacttct
     2101 acagttacct tgcggatggc gatgcagtcg acaaattatt agctctgacg gtataaccct
     2161 ccatctccac ggaaaacgca aaacagcaca atgtcctgaa tgctttaagc gtagcgactc
     2221 tgttcatagt tgtcgtcggc gccggataca gcatctaccc tgctcaggac atacgctatg
     2281 gcttgtattt tccgtccgcc actggtactg ccgtaacccg gcttgttcac gtaaaatttt
     2341 tgccgagtcg cttgctccct tcgccggttc acaccaacag tcttcacagg cgttacaaaa
     2401 tttacaacgt caactgggat taatcgccgg aggtgaggcc gggaaacggg cagcaacggc
     2461 agtgggtctc cgttgcagtg ctgatactct ccttcgcagg gttatcaata ccccggagac
     2521 gaaacagtca ggcgcgcctc atgtcggtat tgatgagtgg gcgtggcatc ggggccaccg
     2581 ttacggtacg ttaatcgtca atcttgatac tcaccgtccc ctcgtcctgc ttcccggccg
     2641 tgatcagcgt acgctggcga cctggttcag aaaatatccg gaaatacaga ttgtctcgcg
     2701 tgatcgcagt ggagtctatg cgacagcagc acgtgaaggt gcacctcagg ccagacaggt
     2761 ggccgaacga tggcatctgc taaaaaatat tggcgatgcg cttgaacgaa tgatgtacag
     2821 acatatacct ctgatacgtc ttgttgccag tgagttgtca ccaaagaaat cacctgatcc
     2881 agaaccatct gtgcctgcag catcgctccg tcgtccggaa cgcctaaaac aacaaacccg
     2941 caaaaaacgg catcagcgtt ggacagaggt tatggccctg cataacaagg gatgtagttt
     3001 cagggaaata tcccgtatta caggcctgtc gcgtgtgaca gtcagtcgct gggtgcgttc
     3061 aggaacattc cctgaaatgt caacccgacc tccaaagcga gggcttctgg acccatggag
     3121 ggagtggtta aaagagcaac gagaaagtgg taattataac gccagccgga tatggcggga
     3181 aatggtggcc cggggattta caggcagtga aaccatcgtc agggatgcgg ttgccaaatg
     3241 gcgtaaaggc tggaacccac cggttactac tgccgtcaga cttccttcag tgtcccgggt
     3301 aagccgctgg ttgatgccct ggagaataac cagggatgaa gaaaattatg cttcccgatt
     3361 tattagtctg atgtgtgaaa aagaacctga gctgaaaata gcgcagcaac tggcactcga
     3421 gttctaccgt attctgaaaa cccaaaataa atcacagcta agcagttggt tcactcgatg
     3481 tcacgaacgg tgcaatagtg atccacaccc aacgcctgaa atcagatcca gggggtaatc
     3541 tgctctcctg attcaggaga g
//
LOCUS       DAJVTL010000248         3560 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.250, whole genome shotgun sequence.
ACCESSION   DAJVTL010000248 DAJVTL010000000
VERSION     DAJVTL010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3560)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.250"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..200
                     /locus_tag="OQQ26_004332"
     CDS             <1..200
                     /locus_tag="OQQ26_004332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HCS1859551.1"
                     /translation="WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSF
                     SKSVELHDKVIGHYLNIKHYQ"
     gene            complement(220..285)
                     /locus_tag="OQQ26_004333"
                     /pseudo
     CDS             complement(220..285)
                     /locus_tag="OQQ26_004333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280980.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease"
     gene            524..622
                     /locus_tag="OQQ26_004334"
                     /pseudo
     CDS             524..622
                     /locus_tag="OQQ26_004334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612101.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            962..1219
                     /locus_tag="OQQ26_004335"
     CDS             962..1219
                     /locus_tag="OQQ26_004335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm development YmgB/AriR family protein"
                     /protein_id="HCS1859552.1"
                     /translation="MHSDYYNMVFGEKLANILYEANSQFFYERNVIEEAVNALFCERE
                     IINNKNIIKKLVFFLSDVNHTKKDVVQSALNIIIDITSGDI"
     gene            complement(1557..1700)
                     /locus_tag="OQQ26_004336"
     CDS             complement(1557..1700)
                     /locus_tag="OQQ26_004336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCS1859553.1"
                     /translation="MNNDELATLTWVDWYNKRRLLERLGHIPPAEAEKAYYASIGNDD
                     LAA"
     gene            complement(1746..1874)
                     /locus_tag="OQQ26_004337"
                     /pseudo
     CDS             complement(1746..1874)
                     /locus_tag="OQQ26_004337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585073.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(1910..2572)
                     /locus_tag="OQQ26_004338"
                     /pseudo
     CDS             complement(1910..2572)
                     /locus_tag="OQQ26_004338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343613.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
     gene            complement(3025..3442)
                     /gene="tnpA"
                     /locus_tag="OQQ26_004339"
                     /pseudo
     CDS             complement(3025..3442)
                     /gene="tnpA"
                     /locus_tag="OQQ26_004339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459923.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
BASE COUNT          988 a          822 c          713 g         1037 t
ORIGIN      
        1 gctggccgct gtatgaatca cgcctgaagg gaaagctgca cgttatcagc aagcgttaca
       61 ctcagcgcat tgagcgacat aatctgaatc tgagacaaca tctggcaagg ctgggacgga
      121 agtcactgtc gttctcaaaa tcggtggagc ttcatgacaa ggtcatcggg cattatctga
      181 acataaaaca ctatcagtaa gttggagtca ttacctcctc ccgaactcaa agctatcata
      241 cagataatta ctggttaacc ctatataggg cattttaaag tgttgtgatc ttacccagca
      301 atagtggaca cgcggctaag tgagtaaatt ctcagtcaga ggtgactcac aagacaaaac
      361 agtttcaacc agtaaaaaaa cgtaaacacc attcgcatga atttcgtagt taagctctga
      421 agcttgcaga atgcatcggt gttactgccg gagtccgtga acttagtctg catgaatcac
      481 cacagcttta cagttgtcgc agtaaacagc aaaatcagca aacttactta attatatcga
      541 gtgcgattac aatcgctggc gatggtacag ttggtgtggc ggtctcagtc cggaacaatt
      601 tgaaaatcag aatctcactt aaagcggcat ccattttaca aaagatggcc gtctgtgtat
      661 ttgtaatgaa taccttctac atgtttagag tgcataatcc acgacaaggc gatatcctaa
      721 aaattagcta gcaggtaact ttgatggcat agataatgtt tttagtaaaa aagagttgac
      781 tgaatataat acagcctctt cctacataag aaggaatgtg ctcacaaaaa aaaaccatta
      841 gtctgcttcc tgttcttaca ataatcagta ttatgtattt tatttatata gcaaaatatg
      901 cttgttacac ctgtcataat taggcatggt aaaattattg actgaaccct gggggagaaa
      961 gatgcacagt gattattata atatggtttt tggtgaaaaa ttggccaata ttttatatga
     1021 agctaactct caattttttt acgagagaaa tgtcatagaa gaggcagtca acgctttatt
     1081 ctgtgagcgt gaaataataa acaacaagaa cataataaag aagctggtgt tctttttgtc
     1141 agatgttaat cacaccaaga aagatgttgt tcagagcgca cttaatatta tcattgacat
     1201 tacatcaggt gatatttgag attttacata aaagataatc tctcaaggag tcttatctga
     1261 aaacgaaata tatagtccct ctcgttttgt aatatcgatt ggctttgttg aatcggttac
     1321 gtaccccgga gccggtcata ttttcaggta atacacacgc tttcagacat ttcagctttc
     1381 gtcattttgg tatcatgggc atagcttctg ctacctgacc atcataatca cgcagcttca
     1441 gtgaagcagt gaccacctgt ttaacccggt gtatcgttgt gatcttatcc agcaataatg
     1501 gacacgcggc taagtgaacc gccccgggtt tcctggagag tgttttatct gtgaactcag
     1561 gctgccagat catcgtttcc gatggaagca taataagctt tttctgcttc tgccggtggg
     1621 atatggccca gcctttccag caatcgtcgc ttgttatacc agtccaccca cgtgagtgtg
     1681 gccagctcat cattattcat ggttcttgca tctccgtcag acgtttttat atccggacag
     1741 cccctctatg gccacttctg tgcagtatgc aatacacgca ggatatacac ttttccccac
     1801 tggctatcga cctcataaac cagaacaaaa tgcgggtgaa taaccagttc ccgggcacct
     1861 tccacacgac cgtgtcaacg ccacgatgtt tgaccgttag gggatgcgga cgatttttca
     1921 gcccactcag tacacccagc cagaactttg caccttcatt ttctgccagc cacataccca
     1981 gcagctcttt ctgaccgtcg gtattgatgc ccagcgcgag gaacaccgct ttgttaatga
     2041 cactcccgcc gtgacgaacc ttaaccacaa tacagtcaag ataaacaatg ggatacagtg
     2101 catccaacgg tcgattttgc catttagaaa cctgctcttt aaccgcatcg gtcactttgg
     2161 atatcagcgt gggcgagaca tcggcgtcgt acatttcttt gaacgtggca acgatttccc
     2221 gcgtagtcat gcctttggca tacagggaca aaatctagct gtccatctgg gtgatgcgtg
     2281 tctgatgctt cttaattagt tgcggttcga agatattttc acggtcacgc ggcgtgttaa
     2341 gttcgatctc gccatcatcg tacaataccg tttttaacga gtagccatta cgggtattag
     2401 agcctgattt aggagcattt ttctcatgac cgagatggtc agtcagttct gcattgagcg
     2461 ccgtttcgac ggtaagcttt gtcaacatgc gtgaaaactg gttgaggtcg gcttcgattt
     2521 taaggccttt gaccagttca gccgcaaggg ctttaagttt cttttcgtcc atcgtttgcc
     2581 tgtctccgtt gttggagtga acatatcaaa aacaggcaat tacacaattt taattacagt
     2641 ctctcaccat gtggtacttt tttatcaaat ccaccaaaac aaaaataatg gcgaacttat
     2701 tgaaatgtga ataatttaac atctgctgac gaccttccga aacctcaatt atagagcaca
     2761 aacagtacaa taaaaactct aatgaaaata ctgattaata tttctatgca aacaatcaaa
     2821 aaaatgtact ctcatgcgtt tgcccgctgc catagacggg ctttttttac aataaatatc
     2881 ctccggcata gccggagttt tttcaaatgc gcctataagg ctctcttacc agtcgcgtcc
     2941 taacaggcgc acacgatctg acatttgcat ccaacttcgt tacttacggc ccgtaaacgg
     3001 gctgcccgga tagggaattg ataactactc tcccatttta tcctcttcaa gctggtgctt
     3061 tatgtaatcc tgtatcttcg ccgtattctt atccaccgta tcgacgtagt accccctgct
     3121 gcaccagaac gccctgttcc tgtatttgaa tttcaaatca ccaaactgct cgtaaagcat
     3181 cagactgctt ttccctttca gatatcccat aaagccggat acgctcattt tgggcgggat
     3241 ctccacaagc ataatggata tgatctgcac agcattcagc ttccagaatc cgtacacttt
     3301 tccactcaca cagctttctc aaaatactgc ctgttgctct acgcttctcg ctgtagaaca
     3361 cctgtcttcg gtattttggc gcaaatacta tgtgatattt acagttccat cgggtgtgcg
     3421 ctaagctctt ttcgttcccc attgggaccc cttttgattt cttgtttgac tcttgcagtt
     3481 gccagaccgc aaagtgtttt aacaaatcaa aaggggtttt aataactggc tcaaagctga
     3541 aagctttccg gaacccccag
//
LOCUS       DAJVTL010000249         3482 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.251, whole genome shotgun sequence.
ACCESSION   DAJVTL010000249 DAJVTL010000000
VERSION     DAJVTL010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3482
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.251"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            215..1402
                     /gene="ydeE"
                     /locus_tag="OQQ26_004340"
     CDS             215..1402
                     /gene="ydeE"
                     /locus_tag="OQQ26_004340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux MFS transporter YdeE"
                     /protein_id="HCS1859554.1"
                     /translation="MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL
                     IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLF
                     FALINCAYSVFATVLKAWFADNLSSTSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSI
                     NLPFWLAAICSAFPMLFIQIWVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLA
                     SFVSGAFASCISQYVMVIADGDFAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRAL
                     MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKAS
                     YFSAQSLGWLGAAINPLVSGVVLTSLPPSSLFVILALVIIAAWVLMLKGIRARPWGQP
                     ALC"
     gene            1529..1624
                     /gene="mgtS"
                     /locus_tag="OQQ26_004341"
     CDS             1529..1624
                     /gene="mgtS"
                     /locus_tag="OQQ26_004341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MgtS"
                     /protein_id="HCS1859555.1"
                     /translation="MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD"
     gene            complement(1843..2733)
                     /gene="dgcZ"
                     /locus_tag="OQQ26_004342"
     CDS             complement(1843..2733)
                     /gene="dgcZ"
                     /locus_tag="OQQ26_004342"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcZ"
                     /protein_id="HCS1859556.1"
                     /translation="MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEIT
                     DNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAH
                     FDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNTEPLNLY
                     LMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAAN
                     DEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEG
                     KQTGRNRCMFIDEQNVINRV"
     gene            complement(2988..3380)
                     /gene="ydeI"
                     /locus_tag="OQQ26_004343"
     CDS             complement(2988..3380)
                     /gene="ydeI"
                     /locus_tag="OQQ26_004343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family stress tolerance OB fold protein"
                     /protein_id="HCS1859557.1"
                     /translation="MKFQTIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGT
                     DDAKKMTVDFAKNMHDGASVSLRGNLISRKGEDRYVFRDKSGEINVVIPAAVFDGREV
                     QPDQMINISGSLDKKSAPAVVRVTHLQK"
BASE COUNT          892 a          823 c          738 g         1029 t
ORIGIN      
        1 accccatctt ttcgcgacat tctaccgcct ctgaatttca tcttttgtaa gcaatcaact
       61 tagctgaatt tacttttctt taacagttga ttcgttagtc gccggttacg acggcattaa
      121 tgcgcaaata agtcgctata cttcggattt ttgccatgct atttctttac atctctaaaa
      181 caaaacataa cgaaacgcac tgccgaacag acaaatgaac ttatccctac gacgctctac
      241 cagcgccctt cttgcctcgt cgttgttatt aaccatcgga cgcggcgcta cgctgccatt
      301 tatgaccatt tacttgagtc gccagtacag cctgagtgtc gatctaatcg gttatgcgat
      361 gacaattgcg ctcactattg gcgtcgtttt tagcctcggt tttggtatcc tggcggataa
      421 gttcgacaag aaacgctata tgttactggc aattaccgcc ttcgccagcg gttttattgc
      481 cattccttta gtgaataacg tgacgctggt tgtgctcttt tttgccctca ttaactgcgc
      541 ctattctgtt tttgctaccg tgctgaaagc ctggtttgcc gacaatcttt cgtccaccag
      601 caaaacgaaa atcttctcaa tcaactacac catgctaaac attggttgga ccatcggtcc
      661 gccgctcggc acgctgttgg tgatgcagag catcaatctg cccttttggc tggcagctat
      721 ctgttccgcg tttcccatgc ttttcattca aatatgggta aagcgcagcg agaaaatcat
      781 cgccacggaa acaggcagtg tctggtcgcc gaaagtttta ttacaagata aagcactgtt
      841 gtggtttacc tgctctggct ttctggcttc ttttgttagc ggcgcatttg catcatgcat
      901 ttcacaatat gtgatggtga ttgctgatgg ggattttgcc gaaaaggtgg tcgcggttgt
      961 tcttccggtg aatgctgcca tggtggttac gttgcaatat tccgtgggcc gccgacttaa
     1021 cccggctaac atccgcgcgc tgatgacagc aggcaccctc tgtttcgtca tcggtctggt
     1081 cggttttatt ttttccggca acagcctgct attgtggggt atgtcagctg cggtatttac
     1141 tgtcggtgaa atcatttatg cgccgggcga gtatatgttg attgaccata ttgcgccgcc
     1201 aggaatgaaa gccagctatt tttccgccca gtctttaggc tggcttggtg ccgcgattaa
     1261 cccattagtg agtggcgtag tgctaaccag cctgccgcct tcctcgctgt ttgtcatctt
     1321 agcgttggtg atcattgctg cgtgggtgct gatgttaaaa gggattcgtg caagaccgtg
     1381 ggggcagccc gcgctttgtt gatttaagtc gaacacaata aaaatttaat tcagccttcg
     1441 tttaggttac ctctgctaat atctttctca ttgagatgaa aattaaggta agcgaggaaa
     1501 cacaccacac cataaacgga ggcaaataat gctgggtaat atgaatgttt ttatggccgt
     1561 actgggaata attttatttt ctggttttct ggccgcgtat ttcagccaca aatgggatga
     1621 ctaatgaacg gagataatcc ctcacctaac cggccccttg ttacagttgt gtacaagggg
     1681 cctgattttt atgacggcga aaaaaaaccg ccagtaaacc ggcggtgaat gcttgcatgg
     1741 atagatttgt gttttgcttt tacgctaaca ggcattttcc tgcactgata acggatcgtt
     1801 gacacagtag catcagtttt ctcaatgaat gttaaacgga gcttaaactc ggttaatcac
     1861 attttgttcg tcaataaaca tgcagcgatt tcttccggtt tgcttaccct catacattgc
     1921 ccggtctgct cttccaatga ccacatccag aggctcttca ggaaatgcgc gactcacacc
     1981 tgctgtcacg gtaatgttga tatgcccttc agaatgtgtg atggcatggt tatcgactaa
     2041 ctggcaaatt ctgacacctg cacgacatgc ttcttcatca ttagccgctt taacaataat
     2101 gataaattct tcgcccccgt agcgataaac cgtttcgtaa tcacgcgtcc aactggctaa
     2161 gtaagttgcc agggtgcgta atactacatc gccgattaaa tgcccgtagg tatcattaac
     2221 caatttaaat cggtcaatat ccaacaacat taaataaaga ttcagaggct cagtgttgcg
     2281 taactgatga tcaaaggatt catcaagaac ccgacgcccc ggcaatcccg tcaaaacatc
     2341 catattgcta cggatcgtaa gcaaataaat tttgtaatcg gttaatgccg cagtaaaaga
     2401 aagcaacccc tcctgaaagg cgtcgaaatg cgcgtcctgc cagtgatttt caacaatagc
     2461 cagcattaat tcccgaccac agttatgcat atgttgatgg gcagaatcca ttagccgaac
     2521 gtaaggtaat tcatcgttat cgagtggccc cagatgatca atccaccgac caaactggca
     2581 cagtccataa gaatggttat ccgttatttc tggcttactg gcatctctcg cgaccacgct
     2641 gtgaaacata ctcaccagcc actggtagtg ggcatcgata gccttattga gatttaacaa
     2701 gatggcatca atttccgttg tcttcttgat cattgccact cctttttcac agttccttgt
     2761 gcgcgctatt ctaacgagag aaaagcaaaa ttacgtcaat attttcatag aaatccgaag
     2821 ttatgagtca tctctgagat aacattgtga tttaaaacaa aatcagcgga taaaaaagtg
     2881 tttaattctg taaatcacct ctgcattatc gtaaataaaa ggatgacaaa tagcataacc
     2941 caatacccta atggcccagt agttcaggcc atcaggctaa tttattttta tttctgcaaa
     3001 tgagtgaccc gaacgacggc cggcgcgctt ttcttatcca gactgccgct aatgttgatc
     3061 atctggtccg gctgaacttc tcgtccatca aagacggccg caggaataac gacattaatt
     3121 tcaccgctct tatcgcgaaa aacgtaacgg tcctctcctt tgcgagaaat caaattaccg
     3181 cgtagtgaaa ccgaagcgcc atcgtgcatg ttttttgcga aatcaacggt catttttttt
     3241 gcatcatcgg ttccgcgata gccatcttct attgcatgag gcggcggtgg cgctgcatcc
     3301 tgttttaaac caccctggtc atctgccaac gcataaggca tgacaagaaa acttgctaat
     3361 acaatggtct gaaatttcat actgactcct taattgcgtt tggtttgact tattaagtct
     3421 ggttgctatt tttataattg ccaaataaga atactgccaa ttgttataag gcatttaaaa
     3481 tc
//
LOCUS       DAJVTL010000250         3451 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.252, whole genome shotgun sequence.
ACCESSION   DAJVTL010000250 DAJVTL010000000
VERSION     DAJVTL010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.252"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(237..1775)
                     /locus_tag="OQQ26_004344"
     CDS             complement(237..1775)
                     /locus_tag="OQQ26_004344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc8 family transposase"
                     /protein_id="HCS1859558.1"
                     /translation="MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQL
                     DKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPF
                     PESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
                     DAIVQVPAPSQPIERGIAGPGLLARVLTSKYAEHTPLYRQSEIYGRQGVELSRSLLSG
                     WVDACCRLLSPLGEALHGYVMTDGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNA
                     GSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELYRNGGITEAACWAHA
                     RRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLES
                     WLREKMKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN
                     FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWSVNRVSELLPWRIA
                     LPAE"
     gene            complement(1825..2172)
                     /gene="tnpB"
                     /locus_tag="OQQ26_004345"
     CDS             complement(1825..2172)
                     /gene="tnpB"
                     /locus_tag="OQQ26_004345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1859559.1"
                     /translation="MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVF
                     IFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDW
                     RQPKRLQTSLTML"
     gene            complement(2169..2537)
                     /locus_tag="OQQ26_004346"
     CDS             complement(2169..2537)
                     /locus_tag="OQQ26_004346"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HCS1859560.1"
                     /translation="MTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENGINANL
                     LFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEGPETLSISCEVTFRHGTL
                     RFNGNVSEKLLTLLIQELKR"
     gene            complement(2604..2942)
                     /locus_tag="OQQ26_004347"
     CDS             complement(2604..2942)
                     /locus_tag="OQQ26_004347"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCS1859561.1"
                     /translation="MLLDAVEQLNKDDKPLLHSDQGWQYQMPRWQRWLSDNGITQSMS
                     RRGNCLDNAAMESFFSTLKSECYYLNKYNKLHHLKQDIIDYIEYYNHHRIKEKLDGMS
                     PVQYRLKHFS"
     gene            complement(2998..3451)
                     /locus_tag="OQQ26_004348"
                     /pseudo
     CDS             complement(2998..3451)
                     /locus_tag="OQQ26_004348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708739.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
BASE COUNT          759 a          953 c          871 g          868 t
ORIGIN      
        1 agctgctgaa ctctgtaaaa gaacacattg cagagctgga ccaggagatt gctgttttct
       61 gtcagcagaa tgactaaata gcggctccca caatgttcaa atgtgggagc tatttaccag
      121 cacatcttac acttatgatg agaactcctg gcgaatttgt tccccatgct ggtcgagcgt
      181 tgccgctccc ggcataacag taagcgtaca gcgagggccg tattgacggg gatgtgttat
      241 tcagctggca gtgctatgcg ccacggaagc agttcgctga cccggttgac cgaccagtct
      301 gctatgacgc caagcacatg gcgaaggtag ctttctggat ccacgtcatt cagtttgcac
      361 gtcccgatca ggctgtacag tagcgctccc cgctcaccac catggtcaga gccgaagaac
      421 aggaagtttt tacgacccag actgaccgcc cgcagggcat tttcagcgat gttgttgtcg
      481 atttccaccc agccatcgtt cgcatagtac gtcagtgccg gccactggtt aagtgcgtac
      541 gcgaacgcct tcgccaactc tgagtgtcgc gacagggtct tcatcttttc acgcaaccag
      601 ctttccaggg atttcaacag cggtttcgtt tttcgctgac gttcagcaag ccgctgctct
      661 gccggcattc cccttatatc cgcctctatg gcgtacaact gaccgatctg ctccagggct
      721 tcttccgtca gtgctgacgg gatgcggacg tgcacatcgt ggatctttcg gcgggcatga
      781 gcccagcagg cagcttccgt tatcccacca ttgcgataca gctcgttgaa cccggcgtac
      841 gcatccgctt gcagcacacc gctgaagcaa gcaagatgag tctgcggatg gatgcctttt
      901 ctgtccgggc tgtaagcgaa ccacactgca ggtgccaacg ctgacccggc attgcggtca
      961 tcacgaacat acgcccacaa ccgcccggtc ttcgtcttct tattacccgg cagcagtacc
     1021 tggaccgggg tatcatcggc atggagtttg ccgtcagtca tgacatagcc atgaagcgcc
     1081 tctcccagcg gagacagcag ccggcagcat gcatccaccc agcccgacag cagtgaacgg
     1141 ctcagctcca caccttgccg gccgtatatt tctgactggc gatacagcgg ggtgtgctct
     1201 gcatacttcg aggtcagcac gcgggccagc agccccggtc cggcgatacc ccgctcgatg
     1261 ggctgcgaag gtgcaggtac ctgcacgatg gcatcgcact gagtacaggc atgtttttcc
     1321 cgtaccgtcc ggataacccg aaaggcgcta cgcatcaact ccagctgttc ggcggtatcc
     1381 tcgcccagat agctcagtga accgccgcag ttcgggcagc acggcgccgc aggcaacagt
     1441 cgcttttcgt cacggggtag tgattcaggg aacggcttac gggtgcgggt ctgacgcaac
     1501 ggacgctgta ctgccgggtc atacacccta ccagtcagcg tatcgctctc tttctgaagc
     1561 cggttcagat cggcttccat ttgtgcgata cggcgggaga ctttttcgga acgactgccg
     1621 aagttcatcc ggcggagttt atccagttgc gcctgcagat ggtctatttc gcgctcccgg
     1681 ttgctcagct tttcctgcag ggcgtggatc agcgcttcct gttcggctag gcgctgtttc
     1741 agcaggaaga tgtcgtcaga agagatgtcg ttcataagcc cgtattttac cgggcttatt
     1801 ctgtgacaac caggataaag agatttacag catggtcagg gaggtctgca gccgcttggg
     1861 ctgtcgccag tcgatacctt ccagcagcat cgccagctgc gcctgcgtaa ggaacacttt
     1921 gccatcacgg gctgacggcc aggcgaagcg cccacgctcc agccgtttgg tcaggaggca
     1981 cagtccgtca ccggtggacc acagcagttt aacttgactg ccgctgcggc cccggaaaat
     2041 gaaaacatgg ccggacatgg gatcgtcttt cagcgccgtc tgtactttcg cagccaggcc
     2101 gttgaagcca tttctcatat cggtgatacc ggcaaccagc caaattttgg tcccggaagg
     2161 taacgggatc atcgcttcag ttcctgtatc agcagagtca ggagcttttc gctgacattg
     2221 ccattgaagc ggagcgtccc gtgccggaac gttacctcac agctgatact gagggtttcc
     2281 gggccctctg cgagcgattc tggctgttcg gcagctgcat cgagagtcac aggaagtagc
     2341 tgggggctct ctgaagaagg taatagcagc tttccctcgc gccattgttg tcgccatttg
     2401 aacaacagat tggcgttaat gccattttca agagcaagtt ttgagatgga tatcccgggt
     2461 tcacaggagg cagcaacgag ctgctgttta aattcgggag gataattagg gcagcctttt
     2521 cgcctgccgg gagtcacatt tttctacata tctgacactt tggttcccac tacttatgat
     2581 ctgcgcccca catcttggac atcctatgaa aaatgtttaa gtcgatattg aaccggactc
     2641 atgccatcga gtttctcttt aatgcgatgg tgattgtagt attcaatgta atcaattata
     2701 tcttgcttta gatgatgtaa cttattgtat ttatttagat agtaacattc tgattttaaa
     2761 gtactaaaaa agctttccat tgctgcatta tctaagcagt taccacgtcg ggacatgctt
     2821 tgtgttatgc cattatcact caaccaacgt tgccaacgag gcatctgata ttgccacccc
     2881 tgatcactat gcaacaaggg cttatcgtct ttattgagtt gttctaccgc atctaatagc
     2941 atgctcttta ccattgatgc taatgggcgc tcagtaaggt tattgaagtg gtcaacaaaa
     3001 actgtccttc gcacgggaga ctgcaacatt cagcatgctg ttatcgctat caataaaccc
     3061 gccgtcttca tgttttgaat agactggcga gaatatcaca atcgctcttt ccgctccctg
     3121 aagagagtgc acggtgccca ctgtgagcga cttttcattc gtgcctgtac tgataccttg
     3181 tttgcccagc acctgtttga tagtggatac ctgagcgcta aaaggcgtca caataccgac
     3241 aacttcatga agcgatttac cgtaatgcgc ttcaatattt tgctggttct ctgccaacca
     3301 gaccgctatc gtttcagcct caagcaaatt atatcgactt ccactacttg ccagctctcc
     3361 tttaccatca atatggagat accccattgc gggcattaaa ttgctctctt cacgccctct
     3421 tttaggcaac aacttaccgt gatagcagag c
//
LOCUS       DAJVTL010000251         3405 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.253, whole genome shotgun sequence.
ACCESSION   DAJVTL010000251 DAJVTL010000000
VERSION     DAJVTL010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.253"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..453
                     /locus_tag="OQQ26_004349"
                     /pseudo
     CDS             1..453
                     /locus_tag="OQQ26_004349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031967.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            1038..1754
                     /locus_tag="OQQ26_004350"
     CDS             1038..1754
                     /locus_tag="OQQ26_004350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859562.1"
                     /translation="MNDNSLLRNSSLFIAYMGCVGWVSAYSYGWGTSFYYGFPWWVVG
                     AGLDDVARSLLYAIIVMGILFTGWGVGILFFLLIKKRSKIQDLSFFRLFFAISLLFFP
                     VIFELLILKQYFILPLSLSCIISSLVISIIIRIYGRIFSVSCFSDIPFVREHRIKLIM
                     AGFLVYFWLFSFLVGWYKPQLKKEYQMLCYNNSWYYVLARYDSRLVLSSSFKDDSNRF
                     LIFNTEQSGFYEINDVYVRK"
     gene            2306..2710
                     /locus_tag="OQQ26_004351"
     CDS             2306..2710
                     /locus_tag="OQQ26_004351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859563.1"
                     /translation="MNTALIVALMCMWYAVPAAAKETLLAMPRNSTEHCYAEINVHGP
                     YGVYFRVVPHPPGGKSWVECNSDYYYSDKPPGVQILGTRAGCRVYGICGTTSTLHVAG
                     RGVVCIKNICSPRGMIIHRIRKRPVVAVSDEM"
     gene            2773..3405
                     /locus_tag="OQQ26_004352"
                     /pseudo
     CDS             2773..3405
                     /locus_tag="OQQ26_004352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          951 a          706 c          795 g          953 t
ORIGIN      
        1 gaaactgaat atggcgttct aagccttccc accatgatcg gggaagaccc agatatgaac
       61 aggcacattc agagttactt taaagagctt actgaacgtc tgaggtgtta gagccatgac
      121 tgccgcagca ttgctggcgg aaatgcctga atcgagcagc ctctcgagac gtgaaatcag
      181 cgcacttgtc ggtgttgctc aggtaaaccg ggactcggga actctgcgcg gtcgacgaac
      241 cattttcggt gattgtgctg gggaagaaca gctctgtaca tggcggcgct tgaggcaccc
      301 cggtttaatc tggtgataaa ggcgttttac atgcgcctac ttgcagccgg aaacgccaaa
      361 aaagtggcac tggttgcctg tatgcgtaag ttgctgacca ttatgaacgc aatgctcaga
      421 aaaaacgaag aatggaatga atcgtattta tgaaaactgg attgtgggcc ataaatattc
      481 caaaaagata gcccgctccg tttattaccg gaacgggcga gagcatgaca ttgtctgtaa
      541 ttataatgag actgctgatt ctacttattt ttaatttcaa gaaaagcgtt ttctacaaag
      601 aattatgaga tttaatgttt tgtttagaca atattatcat tctgttcaat aatgaaagtc
      661 ttcatcaaca acaagtaaaa acaacgtccc tctcatcgaa ccggacttgc agatttcccg
      721 catccggctc tcttgcaaca catcagacct tcacgttcgg gcggttatgg ggaaggtcca
      781 gcaagctgta tgagccctaa ctgtttgaat accagtagat taccagaaac ttctatcgat
      841 tgaagacatt accaactagc gttactaaat gttgaccaag ttttgttcac ttgtctggtt
      901 ttgatagtag cattctgcag agtattttga tatgataaat atgcattaac aatgatatta
      961 ttgttaattt cctagcatga aaattaaaag atcaactttt tatctcgaat attttttaca
     1021 ttatcagttg gtttcttatg aatgacaatt cattgcttag aaattcttca ttattcatcg
     1081 cctatatggg atgtgtaggg tgggtcagtg cttattctta tggctgggga acctcttttt
     1141 actatggatt tccatggtgg gttgttggtg caggtttgga tgatgttgcc agaagtttac
     1201 tctatgctat catagtaatg ggtatacttt ttaccggttg gggggttggt attttatttt
     1261 ttcttcttat aaagaaaaga agtaaaatac aagacttgag tttttttaga ctattttttg
     1321 ctattagcct actgtttttc cctgtaatat tcgaactttt aattctcaaa caatatttca
     1381 tacttccatt atcactttca tgcattatta gttcattggt tatttcaata ataattcgta
     1441 tatatggacg gatcttttct gtatcatgtt tttcagatat cccttttgtt agagaacacc
     1501 gcattaagtt aattatggct ggttttttgg tttatttttg gcttttttcc tttcttgttg
     1561 gctggtataa acctcaatta aaaaaagaat atcagatgct ttgttataat aatagttggt
     1621 attatgttct tgctcgttat gattcacggc tcgttttgtc tagttcattt aaagatgaca
     1681 gtaacagatt cttaatattt aatacagaac agtcgggatt ttatgaaatc aatgatgttt
     1741 atgtcagaaa gtaataatcc tctcccacaa agtgaattaa atgaatatat aatgcgttcg
     1801 aagtatatgt attgagctgt catactgaga aacaaacctt agggcagcac aataaaagcc
     1861 agaaacaact atgcaagaaa gttactaaat aagtgctcgg aacagtaaaa cactcagggg
     1921 ggactcagtc cagattatgt aatcagataa attgccaaac atcacaaatc accagccgga
     1981 ctgagtgatg ccgagcattg caccaatacc ccgtgatgaa cgatgcctga tgcagaaagc
     2041 accctataaa acaaagaaca aaaactacga ccggcgattc accgtcatac tgatgctgca
     2101 tcgtggtgac actgtctgtc actttcatgt tgactgaaca actctgctgc gaagaaggtg
     2161 taccgccggc gggatttgat tgtccggcgt ctagcttcca cttccctgat ggaactgaaa
     2221 gttgttatgg ccggtcagct tgccctgtcc gcaggacatg aggtgctgtg acggacagca
     2281 ccagtaacgg aaagtgacaa tgaaaatgaa tactgcgctg atagttgcac taatgtgtat
     2341 gtggtatgcg gtacccgctg ctgcaaaaga gactttactg gctatgccac gtaattcaac
     2401 agaacattgc tatgcggaga ttaatgtgca cggaccatat ggggtgtatt tccgagtggt
     2461 cccgcatccc cccgggggaa agagctgggt cgaatgtaac agtgactact attactctga
     2521 taaaccaccg ggagtacaga tactcggaac ccgtgcaggg tgtcgggtat acggaatctg
     2581 cgggaccacc tcgacactgc atgtggctgg aagaggggtt gtgtgtatta aaaatatatg
     2641 cagtccacgt gggatgataa ttcacaggat acggaaacgt cctgtagtgg ctgtaagcga
     2701 tgagatgtga tcttacccag caatagtgga cacgcggcta agtgagtaaa ctctcagtca
     2761 gaggtaactc acatgacaaa aacagtatca accagcaaaa aaacacgtaa acagcattcg
     2821 cctgaatttt gcagtgaagc cctgaagctt gctgaacgca tcggtgttgc tgccgcagcc
     2881 cgtgaactca gcctgtatga atctcagctc tatgcgtggc gcagcaaact gcagcaacag
     2941 atgacctcgt ctgagcgtga aagtgaactg gccgctgaaa atgcccgcct gaagcggcaa
     3001 ctggcggagc aggcagagga actggctatc ctccaaaagg ccgcgacata ctttgcgaag
     3061 cgcctgaaat gaagtatgtc tttattgaaa aacatcaggc tgagttcagc atcaaggcaa
     3121 tgtgccgcgt gctccgggtg gcccgcagcg gctggtatac gtggtgtcag cggcggacag
     3181 ggataagccc tcgtcagcag ttccgtcagc agttccgtca gcactgcgac agcgttgtcc
     3241 tcgcggcggc ctttacccgg tcaaaacagc gttacggtgc accacgcctg acggatgaac
     3301 tgcgtgctca gggttaccac tttaacgtaa aaaccgtggc ggcaagcctg cgccgtcagg
     3361 ggctgagggc aaaggcctcc cggaagttca gcccggtcag ttacc
//
LOCUS       DAJVTL010000252         3350 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.254, whole genome shotgun sequence.
ACCESSION   DAJVTL010000252 DAJVTL010000000
VERSION     DAJVTL010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3350
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.254"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            12..949
                     /locus_tag="OQQ26_004353"
                     /pseudo
     CDS             12..949
                     /locus_tag="OQQ26_004353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491235.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            1109..1913
                     /locus_tag="OQQ26_004354"
     CDS             join(1109..1459,1461..1913)
                     /locus_tag="OQQ26_004354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611700.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HCS1859564.1"
                     /translation="MAGNKWQISDELWEKMAPLLPEHKTHHPLGTHRRRVNNRAAMNA
                     ILFVLRTGCQWNALNATGICSSSSAHRRFQEWRDAGVFERFWQNGLLACEQLDAIDWS
                     WLSMDGCMTKSPLAGQKTGRNPTERGKQGVKRSLMTDANGLPLSLVVAGANTHDIKLV
                     ADTLDALQTGRPGRRLHLCMDKGYEAEWLEACLKNRRYEPHIQSRKEESEAIKSTDFK
                     AHRWVVERTHSWMNRFRRVLTLWEKKVENYVAMLYLTCGVIVWNKILLG"
     gene            2142..3245
                     /locus_tag="OQQ26_004355"
                     /pseudo
     CDS             2142..3245
                     /locus_tag="OQQ26_004355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004189158.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            complement(3261..>3350)
                     /locus_tag="OQQ26_004356"
     CDS             complement(3261..>3350)
                     /locus_tag="OQQ26_004356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HCS1859565.1"
                     /translation="LGRKSLSFSKSVELHDKVIGHYLNIKHYQ"
BASE COUNT          961 a          704 c          859 g          826 t
ORIGIN      
        1 atcgtgtcac catggcaaag caaaagttta aaatcaccaa ctggtcagct tacaacaagg
       61 cactcagaca gcgtggttcg ctgacgatct ggcttgatga atctgctatt gctgcatgga
      121 ctgactgcgc aaagcctgaa ggtcgtggtc ggactctcca ctacacctat atggcgatca
      181 ccacggttct gatgatgaag cgcgtgttta atctgccact ccgggcatta cagggcttcg
      241 ttgactcgat ttttacgctg atggctctgc cgctgcgttg cccggactac tctctggtca
      301 gcaaacatgc aaagagcgtt aacatcagca taaaaacgcc aacccggggt gaaatctcgc
      361 atctggttat cgatgctact ggcctgaagg tcttcgggga aggcgaatgg aaagtcaggc
      421 aacatggggc tgacaggcgc agagtatggc gcaaacttca tctggctgca gacggtgtga
      481 cgcatgagat aatctgtgcc gatttatcgc tcagcggtac gacagatgcg caggcactgc
      541 cggggctgat taaccagacc caccgaaaaa taagagaagc ttcagcagac ggcgcttatg
      601 acacgcgcaa ctgtcatgat gcgttgctga ggaaaaaaat caggccactt atccctccac
      661 gaaacggggc gcaatactgg ccgggcagat accatgaacg taaccatgcg gtggctaatc
      721 agcatctgag cggtggcaat gatgtatgaa aaaagaaagt aggctaccac cgacgttccg
      781 tggcagaaac ggcgatgttc cgtatcaaaa ccttgctggg cggacacttg agcctgcgag
      841 actacgatgc gcaggtgggg acgcgcaggt gggcgaagcg atggcgatgg ttaaagcgct
      901 aaaccggatg acgttgttgg gtatgccgca tagtgtccgg atcgcataac gggtgtactg
      961 ctggccccct cttcggctga ctctgattta ttcaacaaag cctgtcagga gctgactgcc
     1021 atgatgcttg tttttttatt catcttatta agaacctatc ccaaaaggaa ttgtcagtta
     1081 ataagtaatg acaatttctg agggaagtat ggcaggtaac aagtggcaga tcagcgatga
     1141 actctgggaa aaaatggctc cgttgctccc ggaacacaaa actcaccatc cgctgggtac
     1201 gcatcgcagg cgggttaata atcgtgccgc aatgaacgcc attctctttg tgctcagaac
     1261 gggttgccag tggaatgccc tgaatgccac cgggatatgc tcgtcaagct ctgctcaccg
     1321 ccgcttccag gagtggcggg atgcaggagt ttttgaacgg ttctggcaaa acgggttgct
     1381 ggcctgtgag cagttggatg ccatcgactg gtcatggctg tcgatggatg gctgtatgac
     1441 gaagtcaccg ctggctggct caaaaaacag gacggaaccc cacagaacga gggaaacagg
     1501 gcgtaaaacg tagcctgatg accgatgcga acgggcttcc cctctcattg gttgtcgcag
     1561 gtgcaaatac ccacgacata aagctggttg ctgatactct cgatgccctt cagacgggca
     1621 ggcctggcag aaggctccac ctctgtatgg acaaaggcta tgaagccgaa tggctggagg
     1681 cctgtctgaa aaaccgccgt tacgaacctc atatccagtc aaggaaagag gagtcggaag
     1741 ccatcaaaag cacggatttt aaagctcacc gctgggtcgt ggagagaacg cacagttgga
     1801 tgaatcgctt ccgtcgggtg ttgactctct gggagaagaa agtcgaaaat tatgtggcaa
     1861 tgctgtatct tacctgcggc gtcattgtct ggaataaaat cctattggga taggctctaa
     1921 gattattaca ctcaaaatac aacccgttgt cttgagtaat actacgctgc aatgggagtg
     1981 ttaggcttag ggtagttgca gcggtcagta gcctggccgt caatactcct gacaaaaaac
     2041 aagagtttcg ccctttggca gccagagcca agggcggtag cgtgcctaca ttacatgtag
     2101 taagccgtga ttgaccatct cgcgagttgt tgaggaatgg tatgaggata gtgtattttg
     2161 tcaatgcagc gtggtacttc gaactgcatt ggttggaccg gtcagaagcg gcaattagca
     2221 aagggtatga agttcatctt gtaagtaatt ttgctgatga cgccatcaaa aataacctgg
     2281 aaaaaaaagg tataaaatgt tgggatattg agcttaacag attttctaaa aatgtgttta
     2341 aaaacatttc aatattcact gcatttagaa agatctgtaa gcaaattaaa cccgatctta
     2401 ttcatctaat tactataaaa ccaatccttt ttggtggatt gtatgcccgg gttgcaggca
     2461 tcccttttgt cgtgagcttt gtgggattag ggagattgtt tggcaataaa cgaggttggt
     2521 tgaataaatt cattttcaac tcagtactgt caatttatag tcttttgcta tcagcaaaaa
     2581 gcccagcgca agtaatattt gagcataatg ctgactttgc tgagctgagt aaatatatta
     2641 aatttgatga aaataacatc cacatcattg aaggagccgg ggtagacagg tttcgcttta
     2701 gttatcagcc agaaccaact cagaataatt tctcggtatt atttgccagc cgtttgctat
     2761 ggtcaaaggg gctcggtgaa gtagtcgagg ccatcggtaa ggttaaacaa aatgaaaata
     2821 acacaacctt atacgttgcg ggaattctcg atgacaaaga tccggataga attgaattag
     2881 atcaaatttt gcaatgggaa aaagaaggaa aaatcatttg gttaggtcga agagatgaca
     2941 tccaaaattt aatcagaaat agccatgtcg tgattttgcc aactaaatat tcagaaggcg
     3001 tgccaagaat aatcattgaa gcgtgtgcta tgggccgaag ttgcattgtc ggaaatgtac
     3061 ccggctgtaa agccataatt aaagataatt tcaatggatg tgtactaaaa acacatagcg
     3121 ctaatgagat tgcggagaaa attgaatatc ttagagataa catggaaata agaaaaaaat
     3181 tcggtctacg ctcagccgaa attgtaaaag aaagattcag caaagaaatt gttatagata
     3241 aaacgggtaa tgactccaac ttattgatag tgttttatgt tcagataatg cccgatgact
     3301 ttgtcatgca gctccaccga ttttgagaac gacagcgact tccgtcccag
//
LOCUS       DAJVTL010000253         3260 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.255, whole genome shotgun sequence.
ACCESSION   DAJVTL010000253 DAJVTL010000000
VERSION     DAJVTL010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.255"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1104
                     /locus_tag="OQQ26_004357"
     CDS             <1..1104
                     /locus_tag="OQQ26_004357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HCS1859566.1"
                     /translation="PAAAYQTLSQLVYKLLTAEQEYETTGSEETLKTVINTDWGLPYL
                     PRASMEQRKSELLEQRAEPVPSRSVPDGVNFLVATVDVQAGRHRRFVVQVTGYGSRGE
                     RWIIDRYNITQSLRGDSDGESQRIDPASYPEDWDVLLTDVFHKSWPLASDPSQQMRLM
                     AMAVDSGGEDGVTDNAYKFWRRCRRDGLGKRIYLFKGDSIRRAKLITRTFPDNTGRTG
                     RRAQAAGDVPLWLLQTDALKDRVNNALWRDSPGPGYVHFPDWLGSWFYDELTYEERSS
                     DGKWSKPGRGANEAFDLMVYAEALVILHGYEKIRWPDAPEWASRETWLECVQDSTEPS
                     SSPEPVSTPVKKQKRKKTVTDDVNPWLTSGGWL"
     gene            1101..1313
                     /locus_tag="OQQ26_004358"
     CDS             1101..1313
                     /locus_tag="OQQ26_004358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001072975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859567.1"
                     /translation="MNQNDIEAMIQRYMEAEMAVLDGKSVTFNGQQMTMENLSEIRQG
                     RQEWERRLAALITRRRGHPGYRLARF"
     gene            1313..2821
                     /locus_tag="OQQ26_004359"
     CDS             1313..2821
                     /locus_tag="OQQ26_004359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000985944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCS1859568.1"
                     /translation="MAILDDVIGVFSPGWKAARLRSRAVIQAYEAVKTTRTHKARREN
                     RTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKLEERVVGKNGIIVEPHPVLRNGAI
                     ARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLTP
                     SAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKE
                     VDAERMLHLKFVRRLHQMRGTSLLSGVLIRLSALKDYEDYELTAARIAAALGMYIRKG
                     DGQSYEPDGNGSKDKERELTIQPGIIYDDLKPGEEIGMVKSDRPNPNLETFRNGQLRA
                     VAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAV
                     ASGVIRLPRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGR
                     NPDDVKRRRKAEIDENRKLDLVFDTDPASDKGGSSAATKRQEPQHTDDQSED"
     gene            2766..>3260
                     /locus_tag="OQQ26_004360"
     CDS             2766..>3260
                     /locus_tag="OQQ26_004360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308856.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HCS1859569.1"
                     /translation="MPQRNDRSRSTPTTSPKINSWFRMQAGHQSDADIYIYDEIGFWG
                     VTAKQFISDLNALGDITHINLHINSPGGDVFEGIAIFNALKTHGASITVYVDGVAASM
                     ASVIAMVGTPVIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVEAVLLPAYAQKTG
                     KTTDE"
BASE COUNT          770 a          788 c          977 g          725 t
ORIGIN      
        1 ccggcagctg cttaccagac actctcgcaa ctcgtttaca aactgcttac tgcagaacag
       61 gaatacgaga caaccggaag tgaagaaaca ctcaagacgg ttatcaatac cgactgggga
      121 ttaccttatc ttccccgcgc cagcatggag caacgaaaaa gtgaactgct tgagcagcgg
      181 gcagagccag ttccttcccg cagtgtgccg gatggcgtta atttccttgt ggcgacagtg
      241 gatgtgcagg cgggacgtca tcgccgtttt gtggttcagg taacgggcta tggcagccgt
      301 ggcgaacgct ggattattga tcgttacaac atcacgcagt cattgcgcgg tgacagcgac
      361 ggggagagcc agcgaattga tccggccagc tatccggaag actgggatgt cctgctgacg
      421 gatgtttttc ataaaagctg gccgctggcc tccgatcctt ctcaacaaat gcgactgatg
      481 gcaatggcgg tggactccgg cggtgaagac ggggtcactg ataatgccta taaattctgg
      541 cgtcgttgcc gtcgtgatgg ccttggtaaa cgtatttacc tgtttaaggg cgacagcatc
      601 cggcgcgcaa aactgatcac tcgtacattc cctgataaca ccggacgaac gggccgacgg
      661 gcgcaggccg caggtgatgt gccgctctgg cttcttcaga cggatgcact gaaagaccgg
      721 gtgaataacg cgttatggcg tgactcgcca ggtcccggct atgtgcattt ccctgactgg
      781 ctggggagct ggttttacga cgaactgacg tatgaagagc ggagcagtga cgggaaatgg
      841 agtaagcctg gtcgcggtgc caacgaagct tttgacctga tggtgtatgc cgaggctctg
      901 gtcattctgc atggatacga aaagatccgc tggccggatg caccggagtg ggcgagccgg
      961 gaaacctggc tggagtgtgt ccaggacagt accgaaccgt catcctcacc ggaaccggta
     1021 tccacgcctg ttaaaaaaca aaaacggaag aaaacagtaa ctgacgatgt taacccctgg
     1081 ctgacttccg gaggatggtt atgaaccaga atgatatcga agccatgatt cagcgttata
     1141 tggaagctga aatggcggtg ctggacggaa aatccgtcac ctttaatggt cagcagatga
     1201 ccatggaaaa cttatctgag atccggcagg gacggcagga gtgggagcgc cgccttgcgg
     1261 ctctgattac acgacgacgg gggcatcccg ggtaccggct ggcgaggttc tgatggcaat
     1321 tcttgatgat gtgattggcg ttttttcacc tggatggaaa gcggcaaggc tgcgttcccg
     1381 tgcggtgatc caggcttatg aagccgtaaa aacgacgcgg acacacaaag cccgacggga
     1441 gaaccgaact gccgaccagc taagccagta cggggccgtg tcgttacgtg agcaggcccg
     1501 ttaccttgat aacaaccacg atctggttat tggtgtattt gacaagctgg aagaacgggt
     1561 ggtggggaaa aacgggatta ttgtcgagcc acatccggta ttacgcaatg gggccattgc
     1621 ccgtgatctg gcagcggaga ttcgcacccg atggagtgaa tggtctgtca gcccggaagt
     1681 caccgggcag tttacccgtc cgatgctgga acgtctgatg ctgcgtacct ggctgcgcga
     1741 tggtgaggtg tttgcccaga tggtttccgg gcgcataaac agcctgacgc cttctgccgg
     1801 tgttcatttc tggctggagg cgctcgagcc ggactttatt cccatgacca gtgatgagag
     1861 caacaggctg aatcagggcg tgtttgttga tgactggggg cgtcccgaaa aatatctggt
     1921 gtataaaagc cgtcccgtat ccggacggca gatggaaacc aaagaagtgg atgcagagcg
     1981 aatgctgcat cttaaatttg ttcgccgtct gcaccagatg cgcgggacgt ctttgttgtc
     2041 cggtgtgctg atccgcctca gtgccctgaa agattatgaa gattatgagc tgactgcagc
     2101 aaggatcgcc gctgctctgg ggatgtacat ccgcaaaggc gacgggcaga gctatgaacc
     2161 ggatggtaat ggcagcaagg ataaggaacg cgagcttacc attcagccag gcattattta
     2221 cgatgatctg aaacccggcg aagaaatcgg aatggtgaag tcggatcgcc ccaatcctaa
     2281 ccttgaaact tttcgtaatg gtcagttgcg tgccgtggcg gcgggcagtc gtctgagttt
     2341 ttccagtaca gcgcgcaact ataacggcac ttacagcgcc cagcgtcagg agctggttga
     2401 atctactgat ggctacctga tcctgcagga ctggtttatt ggtgccgtca cccgcccgat
     2461 gtatcgtgca tggctgaaac aggctgtggc atccggtgtt atcaggctac cccgcgatct
     2521 tgaccgttct tcactgtata ccgcggtgta ttccggacca gtgatgccgt ggattgaccc
     2581 tgttaaggag gctgaggcct ggaaaatcca gattcgtggt ggagcggcga cagaatcaga
     2641 ctgggtacgt gctggtggtc gtaatccgga tgatgtcaaa cgtcggcgca aggccgaaat
     2701 tgatgaaaac cgcaagctgg atctggtatt tgataccgat ccggccagtg ataaaggagg
     2761 cagtagtgcc gcaacgaaac gacaggagcc gcagcacacc gacgaccagt ccgaagatta
     2821 attcctggtt caggatgcag gctggtcacc agagtgacgc ggatatttat atttatgacg
     2881 agattggttt ctggggtgtt acagcgaagc agtttatcag tgatctgaat gcactgggcg
     2941 atatcaccca cattaatctc catatcaatt caccgggtgg cgatgtcttt gaaggcatcg
     3001 ccatttttaa tgcgctgaaa acacatggtg cgtccattac cgtttatgtc gacggtgtgg
     3061 cggcgtcaat ggcgtcggtc attgcgatgg tgggaacccc ggtcattatg ccggaaaaca
     3121 ccttcatgat gattcataaa ccatttggct ttacgggcgg tgatgcggag gacatgcgca
     3181 cctatgccga cctgctcgat aaggttgagg cggttctgtt acccgcttat gcacagaaaa
     3241 ccgggaaaac caccgatgaa
//
LOCUS       DAJVTL010000254         3257 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.256, whole genome shotgun sequence.
ACCESSION   DAJVTL010000254 DAJVTL010000000
VERSION     DAJVTL010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3257
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.256"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1104
                     /locus_tag="OQQ26_004361"
     CDS             <1..1104
                     /locus_tag="OQQ26_004361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HCS1859570.1"
                     /translation="PAAAYQTLSQLVYKLLTAEQEYETTGSEETLRAVINTDWGLPYL
                     PRASMEQRKSELLEQRAEPVPPRCVPDGVNFLAATVDVQAGRHRRFVVQVTGYGCRGE
                     RWIIDRYNITQSLRCDNNGESLRIDPAGYPEDWDVLLTDVFHKSWPLASDPSQQMRLM
                     AMAVDSGGEDGVTDNAYKFWRRCRRDGLGKRIYLFKGDSIRRAKLITRTFPDNTGRTG
                     RRAQAAGDVPLWLLQTDALKDRVNNALWRDSPGPGYVHFPDWLGSWFYDELTYEERSS
                     DGKWSKPGRGANEAFDLMVYAEALVILHGYEKIQWPDAPEWACRETWLERVRDDAGLS
                     ASPEPVSVSVKKKKRKKVVPDEENPWVTSGGWL"
     gene            1101..1313
                     /locus_tag="OQQ26_004362"
     CDS             1101..1313
                     /locus_tag="OQQ26_004362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001072975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859571.1"
                     /translation="MNQNDIEAMIHRYINAEMAVLDGKSITFNGQQMTMENLSEIRQG
                     RQEWERRLATLAARRRGTPGYKLARF"
     gene            1313..2818
                     /locus_tag="OQQ26_004363"
     CDS             1313..2818
                     /locus_tag="OQQ26_004363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HCS1859572.1"
                     /translation="MAILDDVIGVFSPGWKAARLRSRALIRAYEAVKPTRTHKARREN
                     RSADQLSKYGAVSLREQARFLDINHDLVIGVFDKLEERVIGAKGIVVEPQPLLKNGDI
                     ATELAMIIRRLWVEWSVSPDVTGQYTRPMLERLLLRTWLRDGEVFAQLVRGAGGGLVR
                     TAGVPFWIEAMEPDFVPMLSDESVGLNQGVFLDDWGRPKKYLVYKNHPTTGRLSDTKE
                     IVAENMVHLKFTRRLHQTRGTSMLSGVLMRISALKEYEDAELTAARVAAALGLYIRKG
                     DGQDYEDATINKDNDRELHITPGIIYDDLRKGEDIGMVKSDRPNPNLETFRNGQLRAV
                     AAGSRMSFSSAARNYNGTYSAQRQELVESTDGYLILQDCFIGAVTRPVYRTWLNMVVA
                     AGLLKIPSDVDMKTLCNATYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRN
                     PDDVKRRRKAEIDENRKLGLIFDTDPASDKGGSSVATKRQEPQHTDGQSEE"
     gene            2763..>3257
                     /locus_tag="OQQ26_004364"
     CDS             2763..>3257
                     /locus_tag="OQQ26_004364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308856.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HCS1859573.1"
                     /translation="MSQRNDRSRSTPTASPKNNSWFRMQAGHQSDADIYIYDEIGFWG
                     VTAKQFISDLNALGDITHINLHINSPGGDVFEGIAIFNALKTHGASITVYVDGVAASM
                     ASVIAMVGNPVIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVEAVLLPAYAQKTG
                     KTTDE"
BASE COUNT          772 a          738 c          987 g          760 t
ORIGIN      
        1 ccggcagctg cttaccagac actctcgcaa ctcgtttaca aactgcttac tgcagaacag
       61 gaatacgaga caaccggaag tgaagaaaca ctcagggcgg ttatcaacac cgactgggga
      121 ttaccttatc ttccccgcgc cagcatggag caacgaaaaa gtgaactgct tgagcagcgg
      181 gcagagcctg ttcctccccg ctgcgtaccg gatggtgtta atttcctggc ggcgacagtg
      241 gatgtgcagg cgggacgtca tcgccgtttt gtggttcagg taacgggtta tggttgccgt
      301 ggcgaacgct ggattattga tcgttacaac atcacgcagt cattgcgttg tgacaacaac
      361 ggagaaagcc tgcgaattga tcctgctggt tatcctgagg actgggatgt cctgctgacg
      421 gatgtttttc ataaaagctg gccgttggcc tctgatcctt ctcaacaaat gcgactgatg
      481 gcaatggcgg tggactccgg cggtgaagac ggggtcactg ataatgccta taaattctgg
      541 cgtcgttgcc gtcgtgatgg ccttggtaaa cgtatttacc tgtttaaggg cgacagcatc
      601 cggcgcgcaa aactgatcac ccgtacattc cctgataaca ccggacgaac gggccgacgg
      661 gcgcaggccg caggtgatgt gccgctctgg cttcttcaga cggatgccct gaaagaccgg
      721 gtgaataacg cgttatggcg tgactcgcca ggtcccggct atgtgcattt ccctgactgg
      781 ctggggagct ggttttacga cgaactgacg tatgaagagc ggagcagtga cgggaaatgg
      841 agtaagccgg gtcgaggtgc caacgaagct tttgacctga tggtgtatgc cgaggctctg
      901 gtcattctgc atggttacga gaaaattcag tggccggatg cgccggaatg ggcatgcagg
      961 gaaacctggc tggagcgtgt cagggacgat gccggactgt cagcctcgcc ggagccggta
     1021 tccgtgtccg ttaaaaaaaa gaaacgaaaa aaagtggtgc ctgatgaaga aaacccatgg
     1081 gtgacttccg gaggatggtt gtgaaccaga atgatattga agccatgatc catcgttata
     1141 tcaatgcgga aatggcagtg ctggacggaa agtccattac ttttaatggt cagcagatga
     1201 ccatggaaaa cttatccgag atccgacagg ggcggcagga gtgggaacgt cgccttgcga
     1261 ctctggctgc gcggcgacgg gggacgccgg gctataaact ggcgaggttc tgatggcaat
     1321 tcttgatgat gtgattggtg ttttttcacc tggctggaaa gctgcgagat tgcgctcaag
     1381 ggcattaatt cgtgcctatg aggcagtgaa gcctactcgt acacataaag cccggcggga
     1441 aaatcgttct gccgaccagc tcagtaagta cggtgcagtt tccctgcggg agcaggctcg
     1501 ttttctggac atcaatcatg atctggtaat cggtgttttc gacaaacttg aggaacgggt
     1561 gattggtgca aaagggatcg ttgtcgaacc ccagccatta ctgaagaacg gtgatatagc
     1621 cacagagctg gcaatgatta tccgtcgctt gtgggtggaa tggtctgtca gtccggatgt
     1681 gaccgggcag tatacgcgcc ccatgctcga gcgtctgctg ctgcgtacct ggttacgtga
     1741 tggtgaagtg tttgcccagc tggttcgtgg tgccggcgga gggctggtgc ggactgctgg
     1801 cgtgcctttc tggatcgagg caatggagcc ggattttgtg cccatgctca gtgatgaatc
     1861 tgtggggttg aatcagggtg tttttctgga tgactggggc agaccgaaaa aatacctggt
     1921 ttataaaaat catccgacta ccgggcggct gagtgatacc aaagagatcg ttgccgaaaa
     1981 tatggtgcat ctgaaattta cccgtcgtct gcatcagacg cgtggtacat ccatgttgtc
     2041 aggtgtgctg atgcggatca gtgcgcttaa ggaatatgaa gatgctgagc tgacagcggc
     2101 gcgtgttgct gcggctctgg ggctgtatat ccgtaaagga gatgggcagg attatgaaga
     2161 cgccacgata aataaagata atgaccggga actgcatatc acccctggca ttatttatga
     2221 cgatttgcgc aagggggaag atattggcat ggtcaaatct gatcggccca atcctaacct
     2281 tgaaactttt cgtaacgggc agctgcgtgc ggtggccgca ggcagtcgta tgagtttttc
     2341 cagtgcggcg cgcaattaca acggtaccta cagcgctcag cgacaggagc tggtcgagtc
     2401 cactgacggc tatctgatcc tgcaggactg ctttattggt gctgtaaccc gtcccgtgta
     2461 ccggacgtgg ctgaacatgg tggtagcagc aggtctgctg aaaattccgt cggatgtgga
     2521 tatgaaaacg ttgtgtaacg caacatattc cggtccggtc atgccgtgga ttgatccggt
     2581 taaggaggct gaggcctgga aaatccagat tcgcggtgga gcggcgacag aatcagactg
     2641 ggtgcgagca ggtgggcgta atccggatga tgtcaaacgt cggcgcaagg ctgaaattga
     2701 tgaaaaccgc aagctgggtc tgatatttga taccgatccg gccagtgata aaggaggcag
     2761 cagtgtcgca acgaaacgac aggagccgca gcacaccgac ggccagtccg aagaataatt
     2821 cctggttcag gatgcaggca ggtcaccaga gtgacgcgga tatttatatt tatgacgaga
     2881 ttggtttctg gggtgttacg gcgaagcagt ttatcagtga tttgaatgca ctgggcgata
     2941 tcacccacat taatctccat atcaattcac cgggtggcga tgtctttgaa ggcatcgcca
     3001 tttttaatgc actgaaaaca catggtgcgt ccattaccgt ttatgttgac ggtgtggcgg
     3061 catcaatggc gtcggtcatt gcgatggtgg gaaacccggt cattatgccg gaaaacacct
     3121 tcatgatgat tcataaacca tttggcttta cgggcggtga tgcggaggac atgcgcacct
     3181 atgccgacct gctcgataaa gttgaggcgg ttctgttacc cgcttatgca cagaaaaccg
     3241 ggaaaaccac cgatgaa
//
LOCUS       DAJVTL010000255         3233 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.257, whole genome shotgun sequence.
ACCESSION   DAJVTL010000255 DAJVTL010000000
VERSION     DAJVTL010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.257"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..781
                     /locus_tag="OQQ26_004365"
     CDS             <1..781
                     /locus_tag="OQQ26_004365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HCS1859574.1"
                     /translation="NTGSQTADNYYASVYSVDQGVKRILEQLKKNGQYDNTIILFTSD
                     NGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDFYPTAL
                     DAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEENIPFWDNYHKF
                     VRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYKLTDLQQKDNLAAAN
                     PQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK"
     gene            833..1989
                     /locus_tag="OQQ26_004366"
                     /pseudo
     CDS             833..1989
                     /locus_tag="OQQ26_004366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416014.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
     gene            complement(1955..2077)
                     /locus_tag="OQQ26_004367"
     CDS             complement(1955..2077)
                     /locus_tag="OQQ26_004367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859575.1"
                     /translation="MTKHPTGIYVGCLVKVIRRRLRMELKESVINYSPFVLQHP"
     gene            2283..>3233
                     /locus_tag="OQQ26_004368"
     CDS             2283..>3233
                     /locus_tag="OQQ26_004368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HCS1859576.1"
                     /translation="MITIPITFCILIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILG
                     VVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIR
                     WREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
                     SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRP
                     LNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELRDNFHTIKENWHRLMNRQR
                     WLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQA"
BASE COUNT          975 a          674 c          644 g          940 t
ORIGIN      
        1 taataccggt agtcaaacag cagataacta ctacgcttcc gtttattctg ttgatcaggg
       61 tgtaaaacgc attctcgaac aactgaagaa aaacggacag tatgacaata caattattct
      121 ctttacctcc gataatggtg cggttatcga tggtcctctg ccgctgaacg gggcgcaaaa
      181 aggctataag agtcagacct atcctggcgg tactcacacc ccaatgttta tgtggtggaa
      241 aggaaaactt caacccggta attatgacaa gctgatttcc gcaatggatt tctacccgac
      301 agcacttgat gcagccgata tcagcattcc aaaagacctt aagctggatg gtgtttcctt
      361 gctgccctgg ttgcaagata agaaacaagg cgagccacat aaaaatctga cctggataac
      421 ctcttattct cactggtttg atgaggaaaa tattccattc tgggataatt accacaaatt
      481 tgttcgccat cagtcagacg attacccgca taaccccaac actgaggact taagccaatt
      541 ctcttatacg gtgagaaata acgattattc gcttgtctat acagtagaaa acaatcagtt
      601 aggtctctac aaactgacgg atctacagca aaaagataac cttgccgccg ccaatccgca
      661 ggtcgttaaa gagatgcaag gcgtggtaag agagtttatc gacagcagcc agccaccgct
      721 tagcgaagta aatcaggaga agtttaacaa tatcaagaaa gcactaagcg aagcgaaata
      781 actaaacctt catgcggcgg aattttccgc cgccttattg agcgagatag cgatgcacat
      841 tacagccaag ccctccagtt ttcaatgtaa tctcaaatgt gattactgtt tttaccttga
      901 aaaagagtcg cagtttactc atgaaaaatg gatggatgac agcactctga aagagttcat
      961 caaacaatat atcgcagcgt ctggcaatca ggtctatttt acctggcaag gcggtgaacc
     1021 cactctggct ggcctggatt ttttccgtaa agttattcac tatcaacaac gctatgcagg
     1081 ccaaaaacgt atttttaatg cattacaaac gaatggcatt ttattgaata atgaatggta
     1141 tgcctttctc aaagaacatg aatttctggt tggtatctcg atcgatggcc cccaggagtt
     1201 acatgaccgt tacagacgca gtaattcagg taacggtact tttgcaaaag tgatagcagc
     1261 catcgagcgt ctgaaattat atcaagtaga gtttaatacg ttaaccgtca ttaataacgt
     1321 taatgtccat taccctcttg aggtttatca ttttttaaaa tctatcggca gtaaacatat
     1381 gcaatttatc gaattgctag aaaccgggac gccgaatatt gatttcagtg gtcatagtga
     1441 gaacacattc cgtatcattg atttttctgt gcctcccacg gcttatggca agtttatgtc
     1501 aaccattttt atgcaatggg ttaaaaacga tgtgggtgaa attttcattc gtcagtttga
     1561 aagctttgtc agccgttttt tggggaatgg gcatgcaagt tgtattttcc aggagtcctg
     1621 caaggataat ctggttgttg aaagtaatgg agacatttac gaatgcgacc attttgtcta
     1681 tccacagtac aaaattggaa acattaataa atctgaactc aaaacgatga acagtgtaca
     1741 actgacagcg caaaaaaacg gatttcagcg aaatgtcagc aatgtgcata taaacctatc
     1801 tgcaatggcg gttgtcctaa gcatcgtatt actaaagtaa acaatgagac tgtttcttat
     1861 ttttgcgaag gttataaaat ccttttttca accatggtac cttatatgaa cgccatggtt
     1921 gagttagcta agaacagagt accgctttac cacattatgg atgttgcaaa acaaatggag
     1981 aataattaat aacgctctct tttaactcca ttcttagcct ccttcttatg accttaacaa
     2041 ggcacccgac ataaattcct gtcgggtgtt tcgtcatcat catcatcttc ccttgcgaaa
     2101 atcctggctt acgtggtatg cgtcagggca ttagcaatac ccttgattat caatagcata
     2161 accataacca ctgaaaatta aaaatttcta tatatttcat attgttaaat gatacttaaa
     2221 taaatttcat cagtaaatca ttgccataga taatcattgg atggcacaat caattttcgc
     2281 taatgataac cattcccatt acgttttgta tattgatagc aaagtatctc tgtctgctga
     2341 agcccttttg gctgcgtaag aataataaaa cttcagtgtt gttaatcatt attatcctcg
     2401 caatgatcct tggcgtggtt aaaattcagg tctggttaaa cgactggaat aatgattttt
     2461 tcaatgcgct aagccagaaa gaaaccgata agctttggca gcttgttctt tggttccctg
     2521 ccctgctggg gatctttgta ttaatatccg taaacaaaac atggttaatt aaactactga
     2581 ctattcgctg gcgcgaatgg ttaacagatt actaccttaa tcgctggttt gcagataaaa
     2641 actactactt cacgcagatc tacggcgagc ataaaaatac agataaccct gaccaacgta
     2701 tcgctgaaga cattctctta ctgatcagca aaacgctcag tctttcattt ggcttcatcc
     2761 agtcacttag catgctgatc acctttaccg ttattctttg gcaaagcgcg ggtacgctct
     2821 cattcactgt tggtggaaca gaatggaata tccaggggta tatggtctat accgtcgtgc
     2881 tcattgtgat cggtggaact ttatttaccc ataaggtggg taaacgtatt cgtccgctta
     2941 atgtggaaaa acaacgtagc gaagcgacat ttcgaactaa tcttgtgcag cataataagc
     3001 aggcagaact gattgcgcta agcaatgctg agtctctaca acgccaggag ttgcgcgaca
     3061 attttcatac cattaaagag aactggcatc gtttaatgaa tcgtcagcgt tggcttgatt
     3121 actggcaaaa tatttattcg cgctcgctta gcgttcttcc ctactttctg ttattgccgc
     3181 agtttattag cgggcagatc aatctgggcg gactgatgaa atcgcgccag gca
//
LOCUS       DAJVTL010000256         3211 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.258, whole genome shotgun sequence.
ACCESSION   DAJVTL010000256 DAJVTL010000000
VERSION     DAJVTL010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.258"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            162..1697
                     /gene="gadC"
                     /locus_tag="OQQ26_004369"
     CDS             162..1697
                     /gene="gadC"
                     /locus_tag="OQQ26_004369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance gamma-aminobutyrate antiporter
                     GadC"
                     /protein_id="HCS1859577.1"
                     /translation="MATSVQTGKDKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
                     FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
                     FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
                     FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
                     ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
                     VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
                     NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
                     VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
                     VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
                     KKH"
     gene            1828..3147
                     /locus_tag="OQQ26_004370"
     CDS             1828..3147
                     /locus_tag="OQQ26_004370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 10 protein"
                     /protein_id="HCS1859578.1"
                     /translation="MDICSRNEKLVIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
                     PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
                     INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
                     NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
                     IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIA
                     KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
                     YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
                     GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS"
BASE COUNT          767 a          796 c          797 g          851 t
ORIGIN      
        1 acctgataac gtttaacggt aacggtgtcc cgaaacgaac ccgtttcggg acaatttcca
       61 aagtctgttc actggcatta gcaacggaaa atattgttct gaatacgctt cagaacaaaa
      121 caggtgcggt tccgacagga ataccgtttt agggggataa tatggctaca tcagtacaga
      181 caggtaaaga taagcagctc acattactcg gattctttgc cataacggca tcgatggtaa
      241 tggctgttta tgaataccct accttcgcaa catcgggctt ttcattagtc ttcttcctgc
      301 tattaggcgg gattttatgg tttattcccg tgggactttg tgctgcggaa atggccaccg
      361 tcgacggctg ggaagaaggt ggtgtcttcg cctgggtatc aaatactctg ggtccgagat
      421 ggggatttgc agcgatctca tttggctatc tgcaaatcgc cattggtttt attccgatgc
      481 tctatttcgt gttaggggca ctctcctaca tcctgaaatg gccagcgctg aatgaagacc
      541 ccattaccaa aactattgca gcactcatca ttctttgggc gctggcatta acgcagtttg
      601 gtggcacgaa atacacggcg cgaattgcta aagttggctt cttcgccggt atcctgttac
      661 ctgcatttat tttgatcgca ttagcggcta tttatctgca ctccggtgcc cccgttgcta
      721 tcgaaatgga ttcgaagacc ttcttccctg acttctctaa agtgggcaca ctggttgtat
      781 ttgttgcctt cattttgagt tatatgggcg tagaagcttc cgcaactcac gtcaatgaaa
      841 tgagcaaccc cgggcgcgac tatccactgg ctatgttact gctgatggtg gcggcaatct
      901 gcttaagctc tgttggcggt ttgtctattg cgatggtcat tccgggtaat gaaatcaacc
      961 tctccgcagg tgtaatgcaa acctttaccg ttctgatgtc ccatgtggct ccggaaattg
     1021 agtggacggt tcgcgtgatc tccgcactgc tgttgctggg tgttctggcg gaaatcgcct
     1081 cctggattgt tggtccttct cgcgggatgt atgtcacagc gcagaaaaac ctgctgccag
     1141 cggcattcgc taaaatgaac aaaaatggcg taccggtaac gctggtcatt tcgcagctgg
     1201 tgattacttc tatcgcgttg atcatcctca ccaataccgg tggcggtaac aacatgtcct
     1261 tcctgatcgc actggcgctg acggtggtga tttatctgtg tgcttatttc atgctgttta
     1321 ttggctacat tgtgttggtt cttaaacatc ctgacttaaa acgcacattt aatatccctg
     1381 gtggtaaagg ggtgaaactg gtcgtggcaa ttgtcggtct gctgacttca attatggcgt
     1441 ttattgtttc cttcctgccg ccggataaca tccagggtga ctctaccgat atgtatgttg
     1501 aattactggt tgttagtttc ctggtggtac ttgccctgcc ctttattctc tatgctgttc
     1561 atgatcgtaa aggcaaagcg aataccggcg tcactctgga gccaatcaac agtcagaacg
     1621 caccaaaagg tcacttcttc ctgcacccgc gtgcacgttc accacactat attgtgatga
     1681 atgacaagaa acactaacca tgtctgaatg gttataagat aagggagcga taattcatcg
     1741 ctcccttttt cgtgcttgct gtcgtattga cttaaccggg ataagtacga gaatgagcgc
     1801 acatctgttt accggaaacc agcacatatg gatatctgct cccgaaacga gaaattagtg
     1861 attagaagac cagcgatact ggttgcactg gcacttttac tgtgtagttg taaaagcacg
     1921 cctccagagt ccatggtgac accaccagcg ggttcaaagc caccagccac gacgcaacaa
     1981 tcgtcacaac cgatgcgtgg catctggctg gccacggttt ctcggctcga ctggccaccg
     2041 gtttcctcgg ttaacattag taaccccacc agccgggccc gtgtacaaca acaggcgatg
     2101 atcgacaaac tggatcatct gcaacgtctc ggcataaaca cggtcttttt ccaggtcaag
     2161 ccggacggta ccgccctgtg gccatcgaaa attttgccgt ggtccgatct tatgaccggt
     2221 aagattggtg aaaatccggg ttacgatccg ctgcaattta tgctcgacga agcccacaag
     2281 cgtgggatga aagtacacgc ctggtttaac ccctatcgcg tatcggttaa tacgaagccc
     2341 ggtactatca gggaactgaa tagcactctg tctcaacaac cggcgagcgt ctatgtgcaa
     2401 caccgcgact ggatcagaac gtctggcgat cgctttgtcc tcgacccggg catccctgag
     2461 gttcaggact ggatcacatc tatagtcgcg gaagtggttt cccgctatcc ggtagatggc
     2521 gtgcagtttg acgactattt ctatacggag tcaccgggtt cacggctaaa tgataacgaa
     2581 acgtaccgta aatacggagg cgcatttgcg tcaaaagcag actggcggcg caacaatact
     2641 cagcagttaa ttgcaaaggt atcgcacacc attaaaagca ttaagccggg agtcgaattt
     2701 ggcgttagcc cggcaggcgt gtggcgtaac cgatcacacg atccgctcgg ttccgatacc
     2761 cgaggcgcgg cagcctatga cgaatcctac gctgataccc gtcgatgggt ggaacaagga
     2821 ttgctggatt acattgctcc ccaaatttac tggccgttct cacggagtgc cgcgcgttat
     2881 gacgtgttgg caaaatggtg ggcggatgtc gttaaaccga ccaggacccg cctgtatatc
     2941 ggtatcgcct tctataaagt gggtgaacct tcaaagatag agccagactg gatgattaac
     3001 ggcggcgtac cggaactgaa aaagcagctc gatcttaacg atgcggtacc agaaattagc
     3061 ggcaccatct tgttccgtga ggactatctg aataaaccgc agactcaaca agcggtcagc
     3121 tatctgcaaa gtcgttgggg cagttaaact cccatgctta ctttgtaaca agccggtgct
     3181 ttacccactg gcttgttacc ctcttgaact a
//
LOCUS       DAJVTL010000257         3170 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.259, whole genome shotgun sequence.
ACCESSION   DAJVTL010000257 DAJVTL010000000
VERSION     DAJVTL010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.259"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..364)
                     /locus_tag="OQQ26_004371"
     CDS             complement(<1..364)
                     /locus_tag="OQQ26_004371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPC domain-containing protein"
                     /protein_id="HCS1859579.1"
                     /translation="MKIKSISKAVLLLALLTSTSFAAGKNVNVEFRKGHSSAQYSGEI
                     KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP
                     ASGKYELRVLQTRNDARKN"
     gene            605..898
                     /locus_tag="OQQ26_004372"
     CDS             605..898
                     /locus_tag="OQQ26_004372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HCS1859580.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL
                     PLDGRKKLVNADIEKVKQALTEQGYYLQLPPPPEDLLNQHLSVMGQKIDDTNK"
     gene            970..1629
                     /locus_tag="OQQ26_004373"
     CDS             970..1629
                     /locus_tag="OQQ26_004373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HCS1859581.1"
                     /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
                     IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
                     TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQG
                     TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
                     L"
     gene            1721..2167
                     /locus_tag="OQQ26_004374"
     CDS             1721..2167
                     /locus_tag="OQQ26_004374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309703.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HCS1859582.1"
                     /translation="MSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIY
                     FTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDL
                     PAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
     gene            complement(2374..>3170)
                     /gene="hlyE"
                     /locus_tag="OQQ26_004375"
     CDS             complement(2374..>3170)
                     /gene="hlyE"
                     /locus_tag="OQQ26_004375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hemolysin HlyE"
                     /protein_id="HCS1859583.1"
                     /translation="FDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTV
                     YEWCGVATQLLAAYILLFDEYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSF
                     NNASGKLLALDSQLTNDFSEKSSYFQSQVDKIRKEAYAGAAAGVVAGPFGLIISYSIA
                     AGVVEGKLIPELKNKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTET
                     ETTRFYVDYDDLMLSLLKEAAKKMINTCNEYQKRHGKKTLFEVPEV"
BASE COUNT          819 a          682 c          760 g          909 t
ORIGIN      
        1 tgtttttacg ggcgtcgttt cgggtttgca atactcgcag ctcatatttg ccagaagcag
       61 ggagtgagta ttgtccgtga ctatcgagtt ctggggaata tctggataaa tcaacagaat
      121 catcgattcc tggcccgaag agataagtat cagcgccttc attagagata ctcacatgca
      181 ctttctgacc ttttttggca tagaaggtat atgtatcgta atcgtatccc tttatttcgc
      241 cggagtactg agcgctgcta tggccttttc tgaactcaac attgacattc ttacccgcag
      301 caaagctcgt ggaggttagc agtgcaagca gcaatacagc cttactgatg ctcttgattt
      361 tcattggtag tctcctgttc agaatgagta cgatgaactg ttataatata acaatccctt
      421 acgggagaat tccagtggct tttctgcgtt cgttaaaatc ccggcgcggc attttttgcc
      481 gggggattac ttataaaggg gcatggactg aacaaaccgc agaaatctac agctggctgg
      541 cttgtggcgc gggtttcatt gatgttagct tatgccaaaa cctggcatct taaagagtaa
      601 aagtatgttt tgtgtgattt atcgaagcag caagcgtgac cagacctatt tatatgtcga
      661 aaaaaaagac gatttttcgc gtgttcctga ggaactgatg aaaggttttg gtcagcctca
      721 gttagcgatg attctgccgc tggatgggcg gaagaaactg gtcaatgctg atattgaaaa
      781 ggttaaacag gcattaaccg agcaaggtta ctatttgcag ttaccgccac cacccgaaga
      841 tttgctgaat caacatcttt ccgtcatggg gcagaaaata gacgacacta acaaataacc
      901 gatatccggc ggtggcatta tctttgtcgg cgcgggtttt catatccacg ataaggtgag
      961 gggaacgtta tgtatcaaca tcacaactgg caaggtgcgc tgctggatta tccggtgagt
     1021 aaagtagtct gtgttggcag taactatgcc aaacatatta aagagatggg cagcgcagtg
     1081 cccgaagagc cagtgctgtt tattaaacca gaaacggcac tgtgcgatct gcggcagcca
     1141 ttggcgatcc catccgattt cggttcagtt catcatgaag tcgaactggc ggtgttgatt
     1201 ggcgcgacac tgcgtcaggc tacggaagag catgtccgca aagccattgc cggttatggc
     1261 gtggcgctcg atctgacatt gcgtgatgtt cagggaaaaa tgaagaaagc cgggcagccg
     1321 tgggaaaagg ctaaagcgtt tgataactct tgtccgcttt ccgggtttat tcccgcggcg
     1381 gaatttaccg gcgacccgca aaatacaacg ctgggcctga gcgtaaacgg cgagcaacgc
     1441 cagcaaggta cgactgcgga catgatccat aaaatcgttc cgctgatcgc ttatatgagc
     1501 aagtttttta ccctcaaggc cggtgacgtt gtgttgacag gcacgcctga tggcgtcggc
     1561 ccgttgcaaa gcggtgatga gctgacagtc actttcgatg ggcattcttt gacaactcgc
     1621 gttttgtaat actttttgcc gcctgaaagc ggcggcaaaa cttgcatcgc tgtgccagac
     1681 tggttataag gtgcgtttta acgtaatggc ggaacacctg atgagcgatg tacctttctg
     1741 gcaaagtaaa accctggacg aaatgagcga tgcggaatgg gagtcgttgt gtgatggttg
     1801 cggtcagtgt tgcctgcata aactgatgga tgaagacacc gacgaaatct acttcactaa
     1861 cgtcgcctgt cgccagctca atattaaaac ctgtcaatgt cggaactacg aacgtcgttt
     1921 cgagtttgaa cccgactgca ttaaattaac ccgtgaaaat ctgccaacat tcgaatggct
     1981 gccaatgacc tgcgcttatc gtttgctggc ggaaggtaaa gatttacctg cgtggcatcc
     2041 gctacttacg ggttcgaaag cggcaatgca tggtgaacgt atctctgtgc gtcatatcgc
     2101 agtgaaagaa tcagaagtga ttgactggca ggatcatatc ttaaataaac ctgactgggc
     2161 gcagtgataa atttaataga tgttgatggg ggctttctta atatacgtct ggatgcttgc
     2221 catttcgtag ccctgttttt gaaagcgctc tatcataatg agagttaccc gctaccttat
     2281 tatcaacagg taactctcaa tctttaaaaa acgtctgtgt ttttaaatgt gataaacctt
     2341 ataccttgag tacatggaga gaataatcgc ttatcagact tcaggtacct caaagagtgt
     2401 ctttttaccg tgtcttttct gatactcatt acaggtgtta atcatttttt tggccgcttc
     2461 ttttagtaaa gaaagcatta aatcatcata atcaacgtag aatctggttg tttcagtttc
     2521 cgtttttatc tctccgatgg cggctatttc ggtggttaat ttcaatttgg cggcatcgat
     2581 atctttattc gcttgtttaa ccgtgttaga cagggtggta aagaaattct gcacagattt
     2641 taacttgttc ttcaattctg gaatcagttt cccttcaact acgcccgcag caatagaata
     2701 ggaaatgatt aatccaaatg gaccggcgac gacaccggct gcggcaccgg catacgcttc
     2761 cttcctgatt ttatctacct gtgactggaa atagctgctt ttttctgaaa aatcattggt
     2821 taactggcta tctaacgcca gcagtttccc ggaagcgttg ttgaaacttt gtgagcttac
     2881 cagcagggat ttttgcgctt cattcagctt cgtgatgccg tcatccagta ccttaatgag
     2941 aatgtctttc tgggcggatg ctttcttctc attgtactca tcaaatagca aaatatacgc
     3001 tgcgagcaat tgcgtcgcaa caccacacca ttcatacact gtttgggttg cttcaaaata
     3061 cttatcctgg ctatccataa gtaaggtttt aatatcgccg actaaaacgg aggctgcctg
     3121 tgaatactcc tgtttaaagc gacttaactc ttttatggtt tcatcaaagg
//
LOCUS       DAJVTL010000258         3122 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.260, whole genome shotgun sequence.
ACCESSION   DAJVTL010000258 DAJVTL010000000
VERSION     DAJVTL010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.260"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>3122
                     /gene="rhsB"
                     /locus_tag="OQQ26_004376"
     CDS             <1..>3122
                     /gene="rhsB"
                     /locus_tag="OQQ26_004376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhs element protein RhsB"
                     /protein_id="HCS1859584.1"
                     /translation="RQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNP
                     LLGAKVLPGETDLALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDN
                     TLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELR
                     LSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHRE
                     AAGEFSGEITGVTDGARRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEY
                     GRDNGIRLSAVWLTHDPEYPDNLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDK
                     YRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVL
                     HTAGEGGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRIT
                     TPDGRASAFYYNHHNQLTSATGPDGLELRREYDESGRLIQETAPDGDITRYRYDNPHS
                     DLPCATDDATGSRKTMTWSRYGQLLSFTDCSGYQTRYDHDRFGQMTAVHREEGLSQYR
                     AYDSRGQLIAVKDTQGHETRYEYNAAGDLTTVIAPDGSRNGTQYDAWGKAIRTTQGGL
                     TRSMEYDAAGRVIRLTSENGSHTTFHYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSE
                     DEGLVTHWHYDEADRLTHRTVNGETAERWQYDERGWLTDISHISEGHRVTVHYGYDEK
                     GRLTGERQTVHHPETEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLAYGSGYLAGM
                     KLGDTPLVDFTRDRLHRETLRSFGRYELTTAYTPAGQLQRQHLNSLQYDRDYTWNDNG
                     ELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTL
                     SMWPDNRIARDAHYLYRYDRHGSLTEKTDLIPEGGIRTDDERTHRYHYDSQHRLVHYT
                     RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI
                     QNDRTRIQTI"
BASE COUNT          689 a          979 c          970 g          484 t
ORIGIN      
        1 gcgtcagggc gacatgacgc agtatggcgg tagcattgtc cagggttcag ccggggtgcg
       61 cattggtgcc cccaccggcg tggcctgttc ggtgtgcccc ggcggggtga cgtccggcca
      121 tccggtcaat ccgctgctcg gtgcaaaagt ccttcccggc gaaaccgacc ttgccctgcc
      181 cggcccgctg ccgttcatcc tctcccgcac ctacagcagt taccggacaa aaacgcccgc
      241 gccggtgggc agcctcggcc ccggctggaa aatgcctgcg gatatccgct tacagttgcg
      301 cgataacaca ctgatactca gtgataacgg cggcagaagc ctgtattttg agcacctgtt
      361 tcccggtgag gacggttaca gccgcagcga gtcactgtgg ctggtgcgcg gcggcgtggc
      421 gaaactggat gaaggtcacc ggctggccgc actctggcag gcgctgccgg aagaactccg
      481 cttaagtccg catcgttatc tggcgacaaa cagtccgcag gggccgtggt ggctgctcgg
      541 ctggtgtgag cgggtgccgg aagcggatga ggtgctgcct gcgccgctgc cgccgtaccg
      601 ggtactgacc gggctggtgg accgcttcgg gcgcacacag acgttccacc gcgaagccgc
      661 cggtgaattc agcggcgaaa tcaccggcgt gacggatggt gccaggcgtc acttccaact
      721 ggtactgacc acgcaggcgc agcgggcaga agaagcccgg cagcaggcca tttccggcgg
      781 gacggaaccg tccgcttttc ctgataccct gccgggttac accgaatatg gccgggacaa
      841 cggcatccgt ctgtctgccg tgtggctgac gcacgacccg gaatacccgg acaacctgcc
      901 tgccgcgccg ctggtacgct atggctggac gccgcgcggc gaactggcgg cggtgtatga
      961 ccgcagcaat acacaggtgc gcagctttac ttacgatgat aaataccggg gccggatggt
     1021 ggcgcaccgt cacacgggcc gaccggaaat ccgttaccgt tacgacagcg acgggcgggt
     1081 gacagaacag ctaaacccgg caggcttaag ctacacgtat cagtatgaga aagaccgcat
     1141 caccatcacc gacagcctga accgccgtga agtcctgcat accgcaggcg aaggcgggct
     1201 gaagcgggtg gtgaaaaagg aacacgcgga cggcagcgtc acgcagagtc agtttgacgc
     1261 ggtgggcagg ctcagggcac agacggatgc cgcaggcagg acaacagagt acagcccgga
     1321 tgtggtgacg ggcctcatca cgcgcatcac cacgccggat ggcagggcat cggcgtttta
     1381 ctataaccac cacaaccagt taacgtcagc caccgggcct gacgggctgg aattgcgccg
     1441 ggaatatgat gaatccggcc gtctgattca ggaaaccgcc cctgacggcg atatcacccg
     1501 ctaccgttat gataatccac acagtgactt accctgcgca acggacgatg ccaccggcag
     1561 ccggaaaacc atgacgtgga gccgttacgg ccagttgctg agcttcaccg actgttccgg
     1621 ctaccagacc cgttatgacc atgaccgctt cgggcagatg acggcggtgc accgcgagga
     1681 agggctgagc cagtaccgcg catacgacag ccgtggacag ttaattgccg tgaaagacac
     1741 gcagggccat gaaacgcggt atgaatataa cgccgccggt gacctgacca ccgtcattgc
     1801 cccggacggc agcagaaacg ggacacagta cgatgcgtgg ggaaaggcca tccgtaccac
     1861 gcagggcggg ctgacgcgca gtatggaata cgatgctgca ggacgggtca tccgcctgac
     1921 cagtgaaaac ggcagccaca ccaccttcca ttacgatgta ctcgaccggc tgatacagga
     1981 aaccggcttt gacggccgca cacagcgtta tcaccacgac ctgaccggca aacttatccg
     2041 cagcgaggat gaggggctgg tcacccactg gcactatgac gaagcagacc gcctcacgca
     2101 ccgcaccgtg aatggcgaaa ccgcagagcg gtggcagtat gacgaacgcg gctggctgac
     2161 agacatcagc catatcagcg aagggcaccg ggtgacggtg cattacgggt atgatgagaa
     2221 aggccggctg accggtgagc gtcagacggt gcatcacccg gagacggaag cactgctctg
     2281 gcagcatgag accagacatg cgtacaacgc gcaggggctg gcgaaccgct gtataccgga
     2341 cagcctgccc gccgtggaat ggctggccta cggcagcggt tacctggcag gcatgaagct
     2401 cggcgacaca ccgctggtgg atttcacccg cgaccgcctg caccgggaaa cgctgcgcag
     2461 cttcggccgt tatgaactca ccaccgctta cacccctgcc gggcagttac agcgtcagca
     2521 cctgaacagc ctgcagtatg accgcgatta cacctggaac gacaacggcg aactcatccg
     2581 catcagcagc ccgcgccaga cccggagtta cagctacagc accaccggca ggctgaccgg
     2641 cgttcacacc accgcagcga atctggatat ccgcatcccg tatgccacag acccggcagg
     2701 taaccgcctg cccgacccgg agctgcaccc ggacagcacc ctcagcatgt ggccggataa
     2761 ccgtatcgcc cgtgacgcgc actatcttta ccggtatgac cgtcacggca gtctgacaga
     2821 gaaaaccgac ctcatcccgg aagggggtat ccgcacggat gatgagcgca cccaccggta
     2881 ccattacgac agtcagcacc ggctggtgca ctacacgcgg acacaatatg cagagccgct
     2941 ggtcgaaagt cgctatcttt acgacccgct gggccgcagg gtggcaaaac gggtatggcg
     3001 gcgtgaacgg gacctgacgg gctggatgtc gctgtcacgg aaaccgcaag tgacctggta
     3061 cggctgggac ggcgaccggc tgaccacaat acagaacgac agaacccgca tccagacgat
     3121 tt
//
LOCUS       DAJVTL010000259         3047 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.261, whole genome shotgun sequence.
ACCESSION   DAJVTL010000259 DAJVTL010000000
VERSION     DAJVTL010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.261"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            13..>3047
                     /locus_tag="OQQ26_004377"
     CDS             13..>3047
                     /locus_tag="OQQ26_004377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HCS1859585.1"
                     /translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQ
                     RFMERQTQAARQTMQAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQK
                     MREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQ
                     DYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGV
                     SSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRA
                     GWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEEFNRQLALTGHYAGVTVG
                     QLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDT
                     INQFKRLKDDPVNAAKALDNALHFLTATQLEQIRVLGEQGRSSDAARIAMSALAEETG
                     KRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYP
                     WTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNET
                     EAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYS
                     QQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKN
                     ELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGD
                     KQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKR
                     YWQELEVAQGDWKNGAMRAFQNFTADADNAAGTAEQMFTVAFSSAGNALATFCTTGKL
                     NFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVN
                     RPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIEINND
                     GTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGA"
BASE COUNT          775 a          706 c          990 g          576 t
ORIGIN      
        1 gaggtgtgcg ttatggacca gatagccaac ctggtcattg atttggggat tgatgcggca
       61 gagtttaaaa atgaaattcc ccgtatcaaa aaccttctga atggtgcagc cagcgatgca
      121 gaacggtctt ctgcccgtat gcagcgtttt atggagcgtc agactcaggc ggcccggcag
      181 acaatgcagg cggcttcttc ggctgcaaca gcagcatcag cccatgcgca gacggtggag
      241 aagaatgcac gggctcatga acgcatggcc cgtgaggtgg aacaaacccg tctgcgcgtg
      301 gatgccctga atcagaaaat gcgcgaggaa caggcgcagg ccagggcact ggcggaggcg
      361 caggataaag cggctgccgc cttttatcgc cagattgaca gtgtgaaaca ggccggtgcg
      421 gggcttcagg aattacagcg tattcagcag cagatccgac aggccagaaa cagtggcggg
      481 gttggtcagc aggattatct ggcgctgatt tcggagatca cggcgaaaac ccgtgccctg
      541 acgcaggcag aggaacaggc cacccggcag aaagcggcgt ttatccgcca gcttaaagag
      601 caggcaaccc gccagaatct gtcgtcttct gagttgcttc gcgccagggc ggctcagctg
      661 ggggtaagca gtgctgcaga agtgtatatc cgcaaaatgg agcgggcagg aaaagccaca
      721 cattcgctgg ggctgaaaag tgcggcagcc cggcgggagc tgggggtgtt aatcagtcag
      781 atggcgcgcg gcaattttgg tgcgctgagg ggatccggga taacgctggc taaccgtgcc
      841 ggatggacag gcgcactgat gtcgccgaaa ggcatgatga ctggcggcgt tattggcgga
      901 cttgtcgcgg cggtcctggg tctgggtaaa gcctggcatg acggccggaa ggagggcgag
      961 gaatttaacc gtcagctggc gctgacggga cattatgccg gtgtcactgt cgggcagttg
     1021 tggaaactca gccgggccat atccgggaat ggtatcacgc aacatgcggc agccggtgcg
     1081 ctggcacagg tagtgggcag tggggcattt catggaaacg atattggtat ggtggcgaaa
     1141 gctgccgcac agatggagcg atcggttggc cagtcggtca gcgataccat aaatcagttt
     1201 aagcggctga aggatgatcc tgtaaatgcc gcgaaggcgc tggacaatgc gctgcatttt
     1261 ttgactgcca ctcagcttga gcagatacgc gtccttgggg agcaggggcg gtccagtgat
     1321 gcggcccgga tcgccatgtc tgcgctggca gaggaaaccg gtaaacgcac atctgatatt
     1381 gataataatc tcaatgcgct gggtagtacg ctgcaaacct tgtctgactg gtggaagcag
     1441 ttctgggatg cggccatgaa tattggtcgt gaagactcgc tggatgcgca gattgatgcg
     1501 ttacaggaaa aaattcagcg cgcgaaaaaa tatccgtgga caaacgcctc cacacaggtg
     1561 gagtacgatc agcagcgtct taacgatctt caggagaaaa aacgccggaa ggatttgcag
     1621 gatgcaaaag cgcaggcaga acggaattac caggagcaac agaaacgccg gaatgctgaa
     1681 aatgccgcgc tgaaccggat gaatgaaacg gaagctgcac gacatcagcg ggaaattgcg
     1741 cgtattaatg ccatgcagta cgccgaccag gctgtcaggg atgcggcgat acagcgtgaa
     1801 aatgaacgtt acgaaaaagc cattaagaaa aatacacggg caacccgtaa tgatgaggcc
     1861 acccggttat tgctgcagta cagtcagcag caggcacagg tggaagggca gattgctgct
     1921 gccagacagt cagcaggcat tgccactgaa aggatgactg aagcgcataa acagcttctg
     1981 gccctgcagc agcgcatcag cgacctggac gggaaaaagc tgacggcaga tgaaaagagt
     2041 gtgctggccc gtaagaatga gctgattcag gcgctgacgc tgctggatgt gaaacagcag
     2101 gagctgcaga aacagacagc gcttaacgac ctgagaaaaa aaacggttca gctgaccagc
     2161 cagctggcag acaaagaacg tgcactgcgt gagcagcaca atctggatat tgccactgca
     2221 ggtatggggg ataagcagcg gcagcgctac caggcacagt tgcgcatccg gcaggaatac
     2281 cggcaacagt tgcaacagct tgagaatgac agtcgccaga aaggcactta cgggacggag
     2341 gactaccgga gggctgagga ggtgctgaag gggagcctga agcgacaact gaatgaaaac
     2401 aaacgctact ggcaggaact ggaagtggcg cagggcgact ggaaaaacgg tgccatgcgg
     2461 gcgtttcaga attttacggc ggatgcggat aatgcggcgg gaacggcaga acagatgttt
     2521 acagtggcat tcagcagtgc cggtaatgca ctggcgacat tctgtaccac cggtaagctg
     2581 aattttaaat ccttcacctc ttccctgttg tcagatatgg ccagaattat ggcacagatg
     2641 gccatgatgc aggcggtaaa gggcgtcggt tctttattcg gcttcacgac taatgctgat
     2701 ggcggtgttt accagtctgc tgatttgagt cgctacagtg gcacggtggt taaccgtccg
     2761 acgttttttg cttttgcaaa aggcgcgggt gtgatggggg aagcgggacc tgaagccatt
     2821 ctgccactgc gtcgcggtgc tgatggtaag ctgggggttg tggcggatac tggtggttca
     2881 ggcatggtga tgtttgcccc gcagtacaac attgagatca ataacgacgg cacgaacggg
     2941 cagataggtc cggctgccct gaaggtggtt tatgacctcg ggaaaaaagc ggccgcggac
     3001 tttatgcaac agcaggcccg tgatggtggc cggttaagtg gagcata
//
LOCUS       DAJVTL010000260         3039 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.262, whole genome shotgun sequence.
ACCESSION   DAJVTL010000260 DAJVTL010000000
VERSION     DAJVTL010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.262"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(185..835)
                     /gene="tetR(A)"
                     /locus_tag="OQQ26_004378"
     CDS             complement(185..835)
                     /gene="tetR(A)"
                     /locus_tag="OQQ26_004378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000164043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(A)"
                     /protein_id="HCS1859586.1"
                     /translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWH
                     FRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAG
                     TRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGG
                     TVEQAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
     gene            941..2140
                     /gene="tet(A)"
                     /locus_tag="OQQ26_004379"
     CDS             941..2140
                     /gene="tet(A)"
                     /locus_tag="OQQ26_004379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HCS1859587.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSG
                     AGQRADR"
     gene            complement(2172..3032)
                     /locus_tag="OQQ26_004380"
     CDS             complement(2172..3032)
                     /locus_tag="OQQ26_004380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000493383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HCS1859588.1"
                     /translation="MFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALPAGLLLVMI
                     VRQIPTGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLMVVFISAAL
                     LGSPIRLMAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGTVLTRKWQP
                     PVPLLTFTAWQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAGLTYFLWFR
                     GISRLEPTVVSLLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWLGQRSNRTP
                     RARIACRKSP"
BASE COUNT          571 a          946 c          938 g          584 t
ORIGIN      
        1 cagcaggagc gccagaaggc cgccagagag gccgagcgcg gccgtgaggc ttggacgcta
       61 gggcagggca tgaaaaagcc cgtagcgggc tgctacgggc gtctgacgcg gtggaaaggg
      121 ggaggggatg ttgtctacat ggctctgctg tagtgagtgg gttgcgctcc ggcagcggtc
      181 ctgatcaatc gtcacccttt ctcggtcctt caacgttcct gacaacgagc ctccttttcg
      241 ccaatccatc gacaatcacc gcgagtccct gctcgaacgc tgcgtccgga ccggcttcgt
      301 cgaaggcgtc tatcgcggcc cgcaacagcg gcgagagcgg agcctgttca acggtgccgc
      361 cgcgctcgcc ggcatcgctg tcgccggcct gctcctcaag cacggcccca acagtgaagt
      421 agctgattgt catcagcgca ttgacggcgt ccccggccga aaaacccgcc tcgcagagga
      481 agcgaagctg cgcgtcggcc gtttccatct gcggtgcgcc cggtcgcgtg ccggcatgga
      541 tgcgcgcgcc atcgcggtag gcgagcagcg cctgcctgaa gctgcgggca ttcccgatca
      601 gaaatgagcg ccagtcgtcg tcggctctcg gcaccgaatg cgtatgattc tccgccagca
      661 tggcttcggc cagtgcgtcg agcagcgccc gcttgttcct gaagtgccag taaagcgccg
      721 gctgctgaac ccccaaccgt tccgccagtt tgcgtgtcgt cagaccgtct acgccgacct
      781 cgttcaacag gtccagggcg gcacggatca ctgtattcgg ctgcaacttt gtcatgcttg
      841 acactttatc actgataaac ataatatgtc caccaactta tcagtgataa agaatccgcg
      901 cgttcaatcg gaccagcgga ggctggtccg gaggccagac gtgaaaccca acagacccct
      961 gatcgtaatt ctgagcactg tcgcgctcga cgctgtcggc atcggcctga ttatgccggt
     1021 gctgccgggc ctcctgcgcg atctggttca ctcgaacgac gtcaccgccc actatggcat
     1081 tctgctggcg ctgtatgcgt tgatgcaatt tgcctgcgca cctgtgctgg gcgcgctgtc
     1141 ggatcgtttc gggcggcggc cggtcttgct cgtctcgctg gccggcgctg ctgtcgacta
     1201 cgccatcatg gcgacggcgc ctttcctttg ggttctctat atcgggcgga tcgtggccgg
     1261 catcaccggg gcgactgggg cggtagccgg cgcttatatt gccgatatca ctgatggcga
     1321 tgagcgcgcg cggcacttcg gcttcatgag cgcctgtttc gggttcggga tggtcgcggg
     1381 acctgtgctc ggtgggctga tgggcggttt ctccccccac gctccgttct tcgccgcggc
     1441 agccttgaac ggcctcaatt tcctgacggg ctgtttcctt ttgccggagt cgcacaaagg
     1501 cgaacgccgg ccgttacgcc gggaggctct caacccgctc gcttcgttcc ggtgggcccg
     1561 gggcatgacc gtcgtcgccg ccctgatggc ggtcttcttc atcatgcaac ttgtcggaca
     1621 ggtgccggcc gcgctttggg tcattttcgg cgaggatcgc tttcactggg acgcgaccac
     1681 gatcggcatt tcgcttgccg catttggcat tctgcattca ctcgcccagg caatgatcac
     1741 cggccctgta gccgcccggc tcggcgaaag gcgggcactc atgctcggaa tgattgccga
     1801 cggcacaggc tacatcctgc ttgccttcgc gacacgggga tggatggcgt tcccgatcat
     1861 ggtcctgctt gcttcgggtg gcatcggaat gccggcgctg caagcaatgt tgtccaggca
     1921 ggtggatgag gaacgtcagg ggcagctgca aggctcactg gcggcgctca ccagcctgac
     1981 ctcgatcgtc ggacccctcc tcttcacggc gatctatgcg gcttctataa caacgtggaa
     2041 cgggtgggca tggattgcag gcgctgccct ctacttgctc tgcctgccgg cgctgcgtcg
     2101 cgggctttgg agcggcgcag ggcaacgagc cgatcgctga tcgtggaaac gataggccta
     2161 tgccatgcgg gtcaaggcga cttccggcaa gctatacgcg ccctaggagt gcggttggaa
     2221 cgttggccca gccagatact cccgatcacg agcaggacgc cgatgatttg aagcgcactc
     2281 agcgtctgat ccaagaacaa ccatcctagc aacacggcgg tccccgggct gagaaagccc
     2341 agtaaggaaa caactgtagg ttcgagtcgc gagatccccc ggaaccaaag gaagtaggtt
     2401 aaacccgctc cgatcaggcc gagccacgcc aggccgagaa cattggttcc tgtaggcatc
     2461 gggattggcg gatcaaacac taaagctact ggaacgagca gaagtcctcc ggccgccagt
     2521 tgccaggcgg taaaggtgag cagaggcacg ggaggttgcc acttgcgggt cagcacggtt
     2581 ccgaacgcca tggaaaccgc ccccgccagg cccgctgcga cgccgacagg atctagcgct
     2641 gcgtttggtg tcaacaccaa cagcgccacg cccgcagttc cgcaaatagc ccccaggacc
     2701 gccatcaatc gtatcgggct acctagcaga gcggcagaga tgaacacgac catcagcggc
     2761 tgcacagcgc ctaccgtcgc cgcgaccccg cccggcaggc ggtagaccga aataaacaac
     2821 aagctccaga atagcgaaat attaagtgcg ccgaggatga agatgcgcat ccaccagatt
     2881 cccgttggaa tctgtcggac gatcatcacg agcaataaac ccgccggcaa cgcccgcagc
     2941 atcgcgaccg tcatcggtga gaagttcggc aggtattggg tggtgacaat gtaggtgctg
     3001 ccccaaatgg caggtgctat cgctgtgaac aataaatcg
//
LOCUS       DAJVTL010000261         2920 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.263, whole genome shotgun sequence.
ACCESSION   DAJVTL010000261 DAJVTL010000000
VERSION     DAJVTL010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.263"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..2107)
                     /locus_tag="OQQ26_004381"
     CDS             complement(<1..2107)
                     /locus_tag="OQQ26_004381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001571801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIDA repeat-containing protein"
                     /protein_id="HCS1859589.1"
                     /translation="MNRTSPHYCRRSVLSLLISALIYAPPGMAAFTPDVIGVVNDETV
                     DGTQRVDERGTTNNTHIINHGQQNVHGGVSNGSLIESGGYQDVGGHNNFVGQANNTTI
                     NGGRQSIHNGGISTGTIIESGNQDVYTGGISNGTTIRGGNSHISGGTANGTIIDGGGQ
                     SVSTQGHVDGTTINKSGYQDIMQGSLATNTTINGGRQYVEQSTVETTTIKNGGEQRVY
                     ESRALDTTIEGGTQSLNSKSTAKNTQIYSGGTQIIDYTSSSDVIEVYSGGVLDVSGGT
                     AIGSNISAGGSLIVYTGGIAHGVNQETGSALVANTGAGTDIEGYNKLSHFTITGGEAN
                     YVVLENTGELTVVAKTSAKNTTIDAGGKLIVQKEAKTDSTRLNNGGVLEVQDGGEAKH
                     VEQQSGGALIASTTSGTLIEGTNSYGDAFYIRNSEAKNVVLENAGSLTVVTGSRAVDT
                     IINANGKMDVYGKDVGTVLNSAGTQTIYASATSDKANIKGGKQTVYGLATEANIESGE
                     QIVDGGSTEKTHINGGTQTVQNYGKAINTDIVSGLQQIMANGTAEGSIINGGSQVVNE
                     GGLAENSVLNDGGTLDVREKGSATGIQQSSQGALVATTRATRVTGTRADGVAFSIEQG
                     AANNILLANGGVLTVESDTSSDKTQVNTGGREIVKTKATATGTTLTGGEQIVEGVANE
                     TTINDGGIQTVSANGEAIKT"
     gene            complement(2172..2291)
                     /locus_tag="OQQ26_004382"
     CDS             complement(2172..2291)
                     /locus_tag="OQQ26_004382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HCS1859590.1"
                     /translation="MPHSYAEYHHFIMMSLMSGEHNTLALSLQDESPGLVPVG"
     gene            complement(2446..2589)
                     /locus_tag="OQQ26_004383"
     CDS             complement(2446..2589)
                     /locus_tag="OQQ26_004383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859591.1"
                     /translation="MWHLVVLLEELCERGINFRALAQSIFAQQWGDGSCKSKTICDLR
                     VIV"
     gene            complement(2575..2664)
                     /locus_tag="OQQ26_004384"
                     /pseudo
     CDS             complement(2575..2664)
                     /locus_tag="OQQ26_004384"
                     /inference="COORDINATES: protein motif:HMM:NF012464.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          699 a          778 c          597 g          846 t
ORIGIN      
        1 ttgtttttat tgcctctccg ttagctgaaa ctgtttgtat tccgccgtcg ttaatcgttg
       61 tctcattcgc caccccctcg acgatttgtt cgccgccggt gagcgtcgtg cctgtcgcag
      121 tggcttttgt tttgacgatc tcccgtccgc ccgtattgac ctgtgttttg tcagaagagg
      181 tgtctgactc cacggttaac acgccgccat ttgccagcag gatattgttc gccgcaccct
      241 gctcgatgct gaacgcgacg ccatccgcgc gtgttcctgt gacccgcgtc gccctggtgg
      301 ttgcaaccaa agcgccctgg ctactctgct gtatccccgt tgcgctgcct ttctcccgca
      361 catcgagtgt gccgccgtca ttaagcaccg agttttcagc cagaccgccc tcattaacta
      421 cctgtgaacc cccattaata atggaacctt ccgctgtccc gtttgccata atttgttgta
      481 ggccagagac gatatcggta ttgattgcct taccataatt ctgaacggtt tgcgtgccac
      541 cattgatgtg tgttttctct gttgacccac catcaacaat ttgttcacca ctttcgatat
      601 ttgcctcagt ggctaatcca tataccgttt gcttgccacc tttgatattt gctttatcag
      661 aagtggcact ggcatatatt gtttgggtgc cagcactatt gagtacagtg ccaacatctt
      721 ttccataaac atccattttg ccgttggcat taataatcgt atcaactgcc cgggaaccag
      781 tgacgactgt taatgagcca gcgttttcca gcactacatt tttagcttct gaattcctga
      841 tgtagaaagc atcaccataa ctgttggttc cttcgataag tgttccggag gtcgtggaag
      901 caattaatgc gccgccggat tgttgctcaa catgcttagc ctcaccaccg tcctgaacct
      961 ccagaacgcc gccattatta agtctggtgc tatctgtttt agcctccttc tggacaatca
     1021 gcttaccgcc agcatcaatg gtagtatttt tcgccgaggt tttagccact accgtcagtt
     1081 cgccggtatt ttccagcaca acataattag cctcccctcc ggtaatagtg aagtgagaga
     1141 gcttgttgta tccttcgata tcagtccctg cacccgtgtt ggcaactaaa gcactgcccg
     1201 tctcctggtt aaccccatgt gcaataccgc cggtatagac aatcagcgag cctccggcgc
     1261 taatattgct gccaattgcc gtaccaccac taacatcaag cacgccaccg gaataaactt
     1321 caataacatc cgaggagctg gtgtaatcaa taatttgcgt accaccagaa tagatctgag
     1381 tattttttgc cgttgactta ctattcagag actgagttcc gccttcaatc gtcgtgtcca
     1441 gcgcacggct ttcatatact ctttgctcac cgccattttt aatggtggtt gtttctactg
     1501 tgctctgttc aacatactgt cgtccaccat ttatggttgt gttcgtcgcc agacttcctt
     1561 gcatgatgtc ctgataacca gacttattta tcgtcgtacc gtcaacatgc ccctgagttg
     1621 atactgactg gcctccacca tcaatgattg ttccatttgc agtcccccca cttatgtgtg
     1681 aattaccccc cctaattgtc gtgccattgc tgataccacc tgtataaacg tcctgattgc
     1741 cactctcgat tatcgtacct gtggaaatac ccccgttatg aattgactgt ctgcccccgt
     1801 taatggttgt attattagcc tgccccacaa aattgttatg acctcctaca tcttgatatc
     1861 cacccgattc aataagactt ccattagata ccccgccatg aacattctgc tggccatggt
     1921 tgataatatg agtgttattt gttgtacctc gttcatctac tctttgggtg ccatctacag
     1981 tctcatcgtt taccacacca ataacatcag gagtgaaggc cgccatcccg ggcggggcat
     2041 atatcaaggc agatatcaat aaggaaagta ctgagcggcg acaataatgg ggactggtcc
     2101 tgttcataaa tttcatcctc tgaaaagtga atactgagta gcgtttaagc gaccttagct
     2161 ctgctgcaac atcagcccac aggcaccaga ccaggggatt catcctgaag agacagcgca
     2221 agtgtattgt gttcaccgct catcaaagac atcatgatga aatgatgata ttccgcataa
     2281 gaatgaggca ttttttaaac gcagtgcgct gaagtgtgat tggataaaaa agtcaatcta
     2341 ttcaggaaac ccgggcgtat tcttttcttt cgacaatcag gcagtcggca aaataaaatg
     2401 atttacataa tcgtttctga tgaatatctt ctgctcacat aaaaatcaca caataactct
     2461 gagatcgcag attgttttac ttttacagct tccgtccccc cattgttggg caaatataga
     2521 ttgggccaga gcacgaaagt taataccacg ttcgcacagc tcctccaaca gcacgacaag
     2581 atgccacata ctgcgcccca gtcggttcag tttacagact accagtgcgt accctgccga
     2641 taatgtcctg agcagttttt tcagtccgga cctcctgcca cggttttacg ttgaagtggt
     2701 aaccctgagc acgcagttct tcagtcagtc gtggtgcacc gtaacgctgt tattgctggg
     2761 tgagatcaaa aaactttcag gcagctaagg aaagttgaac cagacattag atgaaatatt
     2821 tcaaccaatt acagcaccaa ttcagtcact gccagcccac caaataaatc aaggggttac
     2881 atgaaaatgt agcccctttt tctttggtag tgacactaaa
//
LOCUS       DAJVTL010000262         2851 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.265, whole genome shotgun sequence.
ACCESSION   DAJVTL010000262 DAJVTL010000000
VERSION     DAJVTL010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.265"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..627
                     /locus_tag="OQQ26_004385"
     CDS             <1..627
                     /locus_tag="OQQ26_004385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS element protein"
                     /protein_id="HCS1859592.1"
                     /translation="RYITQDPIGLKGGWNFYQYPLNPVQYIDPLGLDLLSLPSPRQKP
                     VSQSCTIDPITQQPVGRFIGDSKGNIMVEPVGGRTIPYPPSNPGSADTHTLYQNNSNA
                     YRLNPIGHANNSTPHAHLPGTGSGMKGQGPSLDVNGRVVPWNSSAAHIGIRSLGTLSF
                     FSSVLHIFTLRSCREGTFGQCYCAMYVEMSTGSNQDEADIMCGMPEYF"
     gene            642..1043
                     /locus_tag="OQQ26_004386"
     CDS             642..1043
                     /locus_tag="OQQ26_004386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859593.1"
                     /translation="MFDRIYLGDRAIKKIEFDLWSKQIRIQVNLISRIAYGTTEWNFY
                     DNEDLEDGYLVFSDVSFFNITPNGSIPDDYIISIITDNVNVEYFESTIVAVGQIPNTN
                     SGDIDNIGECQIFIRYKHSWIENKFKEKIIE"
     gene            1163..1801
                     /locus_tag="OQQ26_004387"
                     /pseudo
     CDS             1163..1801
                     /locus_tag="OQQ26_004387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709374.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
     gene            1801..2388
                     /gene="mtlR"
                     /locus_tag="OQQ26_004388"
     CDS             1801..2388
                     /gene="mtlR"
                     /locus_tag="OQQ26_004388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol operon repressor MtlR"
                     /protein_id="HCS1859594.1"
                     /translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
                     FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
                     NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
                     YAMQIQRYQQAVRSTMVLSLTELISRISLKKAFQK"
     gene            complement(2400..2609)
                     /locus_tag="OQQ26_004389"
     CDS             complement(2400..2609)
                     /locus_tag="OQQ26_004389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859595.1"
                     /translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
                     ESVPLYLQRLEYYRRLYRPKQVEGQ"
BASE COUNT          827 a          597 c          668 g          759 t
ORIGIN      
        1 cgatatatca ctcaggatcc gattggactg aaggggggat ggaattttta tcagtatccg
       61 ttgaatccgg ttcagtatat agaccctttg ggattagatc tattatcatt accttctccc
      121 agacaaaaac ctgtaagtca atcctgtact attgatccta taactcaaca acctgttggt
      181 aggtttatag gtgattctaa aggcaatatt atggttgaac cggtaggtgg cagaacaatc
      241 ccgtatcccc ccagtaatcc aggaagtgca gatactcaca ctctttatca gaataattca
      301 aatgcttata ggcttaatcc aatagggcat gcaaacaatt caacaccaca tgcacattta
      361 ccaggaacag gtagcggtat gaaaggccaa ggtccatccc ttgatgttaa tggtcgcgtt
      421 gtaccatgga atagtagtgc cgcacatatc ggtattagat cactcggtac actaagcttt
      481 tttagttctg ttttacatat atttacactt agatcatgta gagagggaac gtttggacaa
      541 tgttattgtg ctatgtatgt tgaaatgtca acgggaagca atcaagatga ggctgatata
      601 atgtgcggaa tgcctgagta tttttagaat aggggggtaa tatgtttgat agaatatatc
      661 ttggtgatcg agcaataaaa aaaattgaat ttgatttatg gagtaaacaa attagaattc
      721 aggttaattt aatctcaagg atagcctatg gtacaacaga atggaatttt tatgataatg
      781 aagacttaga agatggttat ttggtatttt cagatgttag tttcttcaat ataactccta
      841 atggctctat tccagatgat tatataattt caataattac agataatgtc aatgttgaat
      901 attttgaatc aactatagtt gcagttggac aaattccaaa tacaaattct ggagacattg
      961 ataatattgg tgagtgtcaa attttcatca ggtataaaca cagctggatt gagaataaat
     1021 tcaaagaaaa aataattgaa taaccatgtt atgtatagac attttagatg gaacgaacca
     1081 gaggaaggca tgcctccgac ttgggttata tgggcacgga gttttagtgt agtgaactca
     1141 acgacgcaaa ccgaataacc tgccgctgga agtgacggta gaaactttca gcgaatggat
     1201 tgtcgataaa acgcagttca aaggcgcact gccgaacatc ccaggcatgg agttaaccga
     1261 caacctgatg gcatttgtcg aacgtaaact cttcaccctg aacacgggtc atgctataac
     1321 cgcgtacctc ggaaaactgg ccggtcatca gaccattcgt gacgctattc tcgacgagaa
     1381 aatccgcgcg gtggtaaaag gtgcgatgga agaaagtggt gcggtactga tcaagcgcta
     1441 cggctttgac gcagacaaac atgcggcgta catccagaaa atcctcggtc gttttgagaa
     1501 cccgtatctg aaagatgatg tagagcgagt aggccgtcag ccgctacgta aactgagtgc
     1561 tggcgaccgt ctgatcaagc cactgctcgg tacgctggaa tacagccttc cgcacaagaa
     1621 tctgattcag gggattgctg gtgcaatgca cttccgcagt gaagatgatc cgcaggctca
     1681 ggaactggca gcactgatcg ctgacaaagg tccgcaggcg gcgctggcac agatttccgg
     1741 tcttgatgcc aacagcgagg ttgtatccga ggcggtaacc gcttataaag caatgcaata
     1801 atggtggacc aggcgcagga caccctgcgc ccgaataaca gattgtcaga tatgcaggca
     1861 acaatggaac aaacccaggc ctttgaaaac cgtgtgcttg agcgtctgaa tgctggcaaa
     1921 accgtgcgaa gctttctgat caccgccgtc gagcttttga ccgaggcggt aaatcttctg
     1981 gtgcttcagg tattccgcaa agacgattac gcggtgaagt atgctgtaga accgttactc
     2041 gacggcgacg gtccgctggg cgatctttct gtgcgtttaa aactcattta cgggttgggc
     2101 gtcattaacc gccaggaata cgaagatgcg gagctgctga tggcattgcg tgaagaacta
     2161 aatcacgacg gcaacgagta cgcctttacc gacgacgaga tccttggacc ctttggtgaa
     2221 ctgcactgcg tggcggcgtt accaccgccg ccacagtttg aaccagcaga ctccagtttg
     2281 tatgcaatgc aaattcagcg ctatcaacag gctgtgcgat caacaatggt cctttcactg
     2341 actgagctga tttccagaat cagcttaaaa aaagcctttc aaaagtaagc aacgtctgct
     2401 tactgcccct ctacctgctt cggccgataa agccgacgat aatactccag acgttgtaga
     2461 tataacggca cgctttcatc gggtattccg gacggaatcg cgttacgggg aggaagtttt
     2521 ttcagatact cccggaacgc ctggcttgat gccatgaaat ctacggcttt atcgataaga
     2581 agcggaacgt tttcacctaa tttgcccatg atgatatctc cgtattaccc cgcgccggga
     2641 atgcgcggcc gccaatttta gtttaggttc ccggtaaaga tgacattaag gaaaacgtgc
     2701 tgaatcctca ataatcatcc gctgctgttt attatctttt ttctatagat ttcttaatta
     2761 atcaataaat tgcgtagttt ttaagcatgt taatgattac gttacagaac tattgcaatg
     2821 tcatcagttg tgaacaaagc acctggtcgc g
//
LOCUS       DAJVTL010000263         2840 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.266, whole genome shotgun sequence.
ACCESSION   DAJVTL010000263 DAJVTL010000000
VERSION     DAJVTL010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.266"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..428
                     /locus_tag="OQQ26_004390"
     CDS             <1..428
                     /locus_tag="OQQ26_004390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416772.1"
                     /note="ElaD; specific cysteine protease which targets
                     ubiquitin and ubiquitin-like proteins covalently bound to
                     target proteins; SseL in Salmonella is required for
                     macrophage killing and virulence, and it is secreted by
                     the salmonella pathogenicity island 2 type III secretion
                     system; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="deubiquitinase"
                     /protein_id="HCS1859596.1"
                     /translation="DKENSLKRIINSFNSELMGEMSNNENITVHLTEPEIIFLHADLQ
                     QYLSQSCGAFVCMAAQEVIEQRESNSDSAPYTLLKNYADTFKKYSAEEQYEIDFQHRL
                     VNRNCYLDKYGDANINHYYRNLEIKHSHPKNRASSKRVS"
     gene            complement(499..2226)
                     /locus_tag="OQQ26_004391"
     CDS             complement(499..2226)
                     /locus_tag="OQQ26_004391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HCS1859597.1"
                     /translation="MRNKNIIMLLMSSLILSGCGPQPENKESQQQQPSTPTEQQVLAA
                     QQAAIKEAEQSAAAAKALAQQEVQQYSDKQALQGRLQEAPTFARAAKAKATHIANPGT
                     ARYQQFDDNPVKQVAQNPLATFSLDVDTGSYANVRRFLNQGLLPPPDAVRVEEIVNYF
                     PSDWDIKDKQSIPASKPIPFAMRYELAPAPWNEQRTLLKVDILAKDRKSEELPASNLV
                     FLIDTSGSMISDERLPLIQSSLKLLVKELREQDNIAIVTYAGDSRIALPSISGSHKAE
                     INAAIDSLDAEGSTNGGAGLELAYQQAAKGFIKGGINRILLATDGDFNVGIDDPKSIE
                     SMVKKQRESGVTLSTFGVGDDNYNEAMMVRIADVGNGNYSYIDTLSEAQKVLNSEMRQ
                     TLITVAKDVKAQIEFNPAWVTEYRQIGYEKRQLRVEDFNNDNVDAGDIGAGKHITLLF
                     ELTLNGQKASIDKLRYAPDNKLAKSDKTKELAWLKIRWKYPQGKESQLVEFPLGPTIN
                     APSEDMRFRAAVAAYGQKLRGSEYLNNTSWQQIKQWAQQAKGEDPQGYRAEFIRLIEL
                     ADGVTDISQ"
     gene            2364..>2840
                     /locus_tag="OQQ26_004392"
     CDS             2364..>2840
                     /locus_tag="OQQ26_004392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416774.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HCS1859598.1"
                     /translation="MKKIIFAFIILFVFSLPMIIFYQPWVNALPSTPRHASPEQLEKT
                     VRYLTQTVHPRSADNIDNLNRSAEYIKEVFVSSGARVTSQDVPITGGPYKNIVADYGP
                     ADGPLIIIGAHYDSASSYENDQLTYTPGADDNASGVAGLLELARLLHQQVPKTGMQL"
BASE COUNT          790 a          664 c          571 g          815 t
ORIGIN      
        1 atgataaaga aaattcactt aagcgtatta ttaatagttt caattctgaa ctcatgggag
       61 aaatgtcgaa taatgagaat ataacagttc atttaaccga accagagata atatttttac
      121 atgccgatct tcagcaatac ttaagccaaa gttgcggtgc atttgtgtgc atggcagccc
      181 aggaagtgat tgaacaaagg gaaagcaatt ctgacagcgc cccctatacg ttattaaaaa
      241 actacgctga cacatttaaa aaatattcag cagaagagca gtacgaaatt gattttcaac
      301 atcgactggt aaacagaaat tgttatttag ataaatatgg cgatgcaaat atcaatcatt
      361 attatagaaa cttagaaata aaacactcac accccaaaaa tagagcatca agcaaaagag
      421 taagttaaca tcattgttaa ttaattcgac cagtcagtaa atatgctgac tggtcgaaca
      481 tagtttacta aaaagtcatc actgactgat gtcagtcaca ccatccgcca gttcaatcag
      541 gcgaataaat tccgccctgt aaccctgtgg atcttcccct tttgcctgct gagcccactg
      601 tttgatctgc tgccaggagg tattgttcag gtattcagaa ccgcgtaact tttgcccata
      661 tgcagctact gctgcgcgaa aacgcatatc ttcagagggc gcgtttattg ttggccccag
      721 cgggaattca actaactgac tttcttttcc ctgcgggtat ttccagcgaa tttttaacca
      781 ggccagttct ttcgttttgt ccgatttcgc taatttgtta tccggggcat agcgtaactt
      841 atcaattgat gctttttgcc cgttcagcgt taattcgaat aacaacgtta tatgtttgcc
      901 tgcgcctata tcccctgcat caacgttgtc gttattaaaa tcttccaccc gaagttggcg
      961 cttttcataa ccaatctgac ggtattccgt tacccacgcg gggttaaact caatttgcgc
     1021 tttgacatct tttgctacgg taatcaacgt ctgccgcatt tcactgttca atactttctg
     1081 cgcttcagag agggtatcaa tgtagctgta gttaccgttg ccaacatcag caattcgcac
     1141 catcattgcc tcgttgtaat tgtcatcccc cacgccaaac gtcgacagag taacaccgga
     1201 ctcccgctgt tttttgacca ttgattcaat cgattttgga tcgtcaatac caacgttaaa
     1261 gtcaccgtca gtggccaata aaatgcgatt gataccgccc ttaataaacc ccttcgccgc
     1321 ctgctgataa gccagttcca gcccggcacc gccattggta ctgccttcgg catccagcga
     1381 atcaattgcg gcattaattt ccgccttatg actcccggag atagaaggca atgcaatacg
     1441 ggagtcgcca gcgtaggtca cgatggcaat gttatcctgc tcacgaagtt ctttgaccaa
     1501 taatttcaac gaagactgga taagtggcaa acgttcatca gaaatcattg aaccagaagt
     1561 gtcgataaga aagaccagat tagaagctgg taactcttca cttttgcgat ctttcgccag
     1621 gatatcaact ttcagcaatg ttcgctgttc attccatggt gcaggtgcca attcgtagcg
     1681 catagcgaaa ggtattggct tagaggccgg aatagattgt ttgtctttga tatcccaatc
     1741 agacgggaaa taattgacta tctcctccac ccgcacagcg tctggcggag gtaacagccc
     1801 ttgattgagg aaacgcctta cattcgcata actgccagtg tcaacgtcaa gactaaacgt
     1861 cgccaacgga ttttgcgcta cctgcttaac cggattatca tcgaactgct ggtagcgagc
     1921 ggttcctgga tttgcgatat gtgtagcttt tgctttagcc gctcttgcaa atgttggcgc
     1981 ttcctgcaat cgcccctgta aagcctgttt gtctgaatat tgttgcactt cttgctgggc
     2041 caaggctttc gcggcggcgg cgctttgctc agcctctttt attgcagctt gctgcgcggc
     2101 aagcacttgc tgctctgtgg gagtactggg ttgttgttgc tgactttcct tattctcagg
     2161 ttgcggccca catcctgaca aaatcaaact actcataagc aacatgatta tatttttatt
     2221 tcgcatataa aatcctttta aataaactca ggaaccagac ataaaatata ctctttgtat
     2281 aatcctgcta atcttaataa aatacaatat cgaaacccat agcaaataat gattcaacaa
     2341 cgcaacccat taataatttg catatgaaaa aaataatctt tgcttttatt atattatttg
     2401 tgttttcact ccctatgatt attttttacc aaccctgggt caatgcatta ccgtcaacgc
     2461 cccgacacgc aagtcctgag caattagaaa aaacagttcg ttatcttaca caaactgtgc
     2521 atccacgtag tgccgacaat attgataatc tgaataggtc cgcagagtat ataaaagagg
     2581 tctttgtcag tagcggtgcc agagttacct cgcaggacgt ccccattacg ggtggcccct
     2641 ataaaaacat tgttgctgat tatggtcctg ccgatggacc gctgattatt attggtgcgc
     2701 attatgactc tgccagcagt tatgaaaacg atcaattgac ctatacgccg ggcgcggatg
     2761 ataacgccag cggtgtggca ggattactcg aactggcacg tttgttacat cagcaagtac
     2821 cgaaaacagg catgcagctg
//
LOCUS       DAJVTL010000264         2840 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.267, whole genome shotgun sequence.
ACCESSION   DAJVTL010000264 DAJVTL010000000
VERSION     DAJVTL010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.267"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(149..1519)
                     /locus_tag="OQQ26_004393"
     CDS             complement(149..1519)
                     /locus_tag="OQQ26_004393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004993790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase family protein"
                     /protein_id="HCS1859599.1"
                     /translation="MYGKQTTVFDSDLYSSLFTQEDMRDIWSDNNLLRCWLRFETTVA
                     RTQSDLGIIPQQAADDIEQACCELNVDWPALAQGTRNVGMAIKPFIDQIASSGTPLVS
                     QYLHWGCTTQDLLDTGLAMRLQQSLQLIYQQVISLGDEMKNMALHHARTVMVARTNSV
                     DASATTWGLHVSGYLVEICRHLQRLQQIYPRAITGLFGGAVGNLASVGEQGIELRARL
                     MQALGLNTPCGINNASQDTIVEVVQCFALIHGTLCRLANDIETMGRTPIAEVFEGEGG
                     GGSSTMPHKANPRASNMIQTLARMGWMYASGAPAMLDQQDVRAASMRVLNWTILPEAS
                     QTISTSLMRAKNMLSHLKINAEKMRDNFNCSKYFIMSESLTMSLARKIGREPAYNLVK
                     NILNHASGEYDFISIARTNSDIVKILTIEEIIEACDPVSYIGCNDDLITETVNHFNQI
                     KTISLL"
     gene            1913..>2840
                     /locus_tag="OQQ26_004394"
     CDS             1913..>2840
                     /locus_tag="OQQ26_004394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016150891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HCS1859600.1"
                     /translation="MKITHLSLLLLTGLSSSTFAMNVYNKDGNTLDIYGRVEGKIASG
                     QNSFAGSETRTDLGGRLGLYLTRDLDFLPDTKVVGRLEWQVRTEKNDNNTDESDLEAR
                     YSYIGLSHKTWGELIAGRTKNPLYQVIKMTDKYKNFTPNIYSYGITTIDDSYQFNRQD
                     GTLQWNAKFYGNEIQLAWVAGNGHSDNESLDYGVMASYRNTLKFGDVKITPAIAASRY
                     KRQDGVVTTDGRNQNDQIMAGLQLGYKDFEMAVTALRTSIARDNKSDNNYTGMDSLIS
                     YKFGKVKFLTGYSFLEEQDKDINEKEDWRVEAQ"
BASE COUNT          866 a          589 c          531 g          854 t
ORIGIN      
        1 tacatcttgc ttacgaaaag agtgacaatg agggtaattt cgcccaactt gaagaacttt
       61 ttgcattttt tgacaacttt tatgccacat ctcataccgg ttaattactc aaatgatggg
      121 agaaattata tctcccacct tttttcattt acagcaatga aatcgttttt atttgattga
      181 aatgattgac tgtttctgta atcaaatcat cattacaacc gatataagaa acaggatcac
      241 atgcctctat gatttcttca atagtcaata tttttactat atcggaattt gttcgcgcta
      301 tgctaataaa atcatactcc ccactggcat gattcaagat attcttaact aaattatagg
      361 caggttcgcg accaattttt ctcgccaaac tcatagtcaa agactctgac atgataaaat
      421 attttgaaca attaaaattg tcccgcattt tctcagcatt gattttaaga tgagaaagca
      481 tattctttgc tcgcatcaga ctggtcgaaa ttgtctgaga agcttcaggt aaaattgtcc
      541 agttgaggac tcgcattgat gccgcccgaa catcctgttg gtccaacatt gccggtgccc
      601 ctgaagcata catccatccc attcttgcca gcgtttggat catattactg gcacgtggat
      661 tcgctttatg cggcatagta ctcgacccac caccaccttc tccttcaaaa acctcagcga
      721 tcggggttct tcccatcgtt tctatatcat tagccagtcg gcataacgtg ccatgaataa
      781 gcgcaaaaca ttggaccact tcaacaattg tatcctgact cgcgttattt attccacagg
      841 gggtatttag ccccaacgcc tgcattaacc tggctcgtaa ctctatgccc tgttctccca
      901 cagaagcaag gtttcccacc gctccaccaa ataatcctgt gattgctcga ggataaatct
      961 gttgtaatcg ttgtaaatgg cgacagatct cgacaagata tcccgaaacg tgcaagcccc
     1021 aggtagttgc ggatgcatct accgagtttg ttcgcgcaac cattacagtt cttgcgtgat
     1081 gtaacgccat atttttcatt tcatcaccaa gcgatataac ctgctgataa atcagttgca
     1141 gagactgttg taatctcatc gccaatcccg tatccagcaa atcctgggtc gtacaacccc
     1201 aatgtaaata ttgactcact agcggtgttc cggaagaagc tatctgatcg ataaagggct
     1261 ttatcgccat cccgacattt ctggttcctt gtgccagggc tggccaatct acatttaatt
     1321 cacagcatgc ctgttcaatg tcatctgcag cttgttgcgg aatgattcca agatcgcttt
     1381 gagtccgtgc cacggttgtt tcaaaccgta accaacaacg caataaatta ttgtctgacc
     1441 aaatatctcg catatcttct tgagtaaata atgacgaata gagatcggaa tcaaaaactg
     1501 ttgtttgctt accgtacata ccgcgcctct caggcattga aagcatatat ttgagtgatt
     1561 agtgtagttt gcgtcatctt ctgaaaaatt tataggggaa attgaatttc ccatttagag
     1621 attattaatg agaaaatata tttcccagtt ttctttttat gaccaataaa aacgtgatgt
     1681 gtttcacact attttttgaa aaaataccaa atttcctctt gtcaccttgc aatgtctcac
     1741 aaaactatta atggattcat taatttttcc tgtcatagca ggtcatttat gtgtgaataa
     1801 tcacacttcc ctgcgagaaa taacctttcc catttcacca gcaataattt taaacagaca
     1861 ataaccttgt aacgattttt attaagatgg ttaataatag ttgagggatt atatgaagat
     1921 tacgcatctt tctttattac tgctgaccgg gttaagcagt tcaacattcg ctatgaatgt
     1981 ctacaataaa gacggtaata cattagacat ttatggtcgg gtggaaggta aaattgccag
     2041 tgggcaaaac tcttttgctg gcagtgaaac ccgaactgat ttaggcggcc gattaggact
     2101 ctaccttacc cgagatctgg attttctacc tgatacaaaa gtcgtgggcc gtctggaatg
     2161 gcaagtacgt actgagaaaa atgataataa tactgacgaa agcgatcttg aagcgcgcta
     2221 ttcatatatt ggcctgtctc ataaaacatg gggagagctt attgctggca gaactaagaa
     2281 cccattatat caggtcataa aaatgactga caagtataaa aattttacac ctaatatcta
     2341 tagctatgga attactacaa ttgatgattc atatcaattt aaccgacagg atggaaccct
     2401 ccaatggaat gcaaaatttt atggtaatga aattcaactt gcatgggtag cgggtaatgg
     2461 tcatagtgac aacgaatctc tggattatgg cgtgatggca agctatcgaa atacgctaaa
     2521 atttggtgat gttaaaataa cacctgctat cgcagcaagt cgttacaaac gacaggatgg
     2581 tgttgtaaca acagatggtc gtaatcagaa tgatcaaatt atggcgggac tgcaattagg
     2641 atacaaagat tttgaaatgg ctgttaccgc tttacgcacc tccatcgcac gagataataa
     2701 aagcgataat aattatacag gcatggattc acttatttca tataaatttg gaaaagtgaa
     2761 gtttctcact ggttacagct ttcttgaaga acaagacaaa gatataaatg aaaaagaaga
     2821 ctggcgagtt gaagcgcaat
//
LOCUS       DAJVTL010000265         2824 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.269, whole genome shotgun sequence.
ACCESSION   DAJVTL010000265 DAJVTL010000000
VERSION     DAJVTL010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.269"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..166
                     /locus_tag="OQQ26_004395"
     CDS             <1..166
                     /locus_tag="OQQ26_004395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001362728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859601.1"
                     /translation="LSAEPRRSFSNEFKLQMVKLASQPGASVARIARVSTPRCLTVMG
                     MRTISWTLRR"
     gene            170..1703
                     /locus_tag="OQQ26_004396"
     CDS             join(170..1312,1314..1703)
                     /locus_tag="OQQ26_004396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001608690.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HCS1859602.1"
                     /translation="MFTEEEKIRAIELYFKYGKKLAPVVRELGYPSKRNLRRWIRSWE
                     AGGGAKESIRHKHRYSDEQKQVAVEHYLNHGCCLAFTSRALGYPCTDVLARWVNELYP
                     DRQRIFTSKANPVAPFEPEVKRQAVMALCTRQVSASEIARRIGVSRAVLYKWKDEIIG
                     NSAYQTMRKHNEPSLEAERDALREEVARLNQEIRRRQMELDILKKAEEIIKKDPGISI
                     SHLNNREKTKIADALRQTYPLTELLHVLGLARSSYFYHRAALKAGDKYATIRTMLTDI
                     FNSNYQCYGYRRLHAMLRHEGVRLSEKVVRRLMVEEQLVVSRNRRRRYSSYCGEIGPA
                     PDNLIARDFKAEQPNQKWLTDITEFQLPAGKVWLSPVVDCFDGKVVSGTLSTRPDAEL
                     VNTMLDSAVETLNAGERPVIHSDRGGHYRWPGWLERVNAAGLIRSMSRKGRSPDNAAC
                     EGFFGRLKTEMYYGRKWSGITLEKFMQHVDAYIRWYNERRIKLSLGAVSPEMYRQQCG
                     LE"
     gene            complement(1898..2062)
                     /locus_tag="OQQ26_004397"
     CDS             complement(1898..2062)
                     /locus_tag="OQQ26_004397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859603.1"
                     /translation="MAPFSLLALCGHEQPDCQEGRFPPGTGMNVRLRRPFFSPAFSVY
                     GLSENTSPSL"
     gene            complement(2155..2316)
                     /locus_tag="OQQ26_004398"
     CDS             complement(2155..2316)
                     /locus_tag="OQQ26_004398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004118124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HCS1859604.1"
                     /translation="MKLPGNALIWCVLIVCCTLLIFTLLTRNRLCEVRLKDGYREVTA
                     TMAYESGGK"
BASE COUNT          751 a          711 c          734 g          628 t
ORIGIN      
        1 attatccgca gaaccccgca gatcattttc aaatgagttt aaacttcaaa tggttaaact
       61 ggcttcacaa ccaggagcct ctgttgcccg tattgcccgg gtgtcaacgc cacgatgttt
      121 gaccgttatg gggatgcgga cgatttcctg gactctcagg agataacaca tgtttactga
      181 agaagaaaaa atccgcgcca ttgagcttta tttcaaatat ggtaagaagc tggctcccgt
      241 cgtacgcgaa ctgggctacc cttcgaaaag aaatctgcgg cgttggatcc gctcatggga
      301 agcaggtggt ggcgcaaaag aatctattcg tcataagcac cgttactccg atgaacaaaa
      361 acaggttgcc gttgaacatt atcttaacca cggctgctgc ctggcgttta ccagcagagc
      421 cctgggttat ccctgcactg atgtactcgc tcgctgggtt aatgaacttt atcccgacag
      481 acaacgtata tttaccagta aggccaaccc ggttgcgccc tttgaaccag aagtcaaacg
      541 tcaggctgtc atggcactct gtacacgaca agtatcagcc agtgaaatcg ccaggcgtat
      601 tggtgtcagt cgtgcggtat tgtataaatg gaaagatgaa attatcggca acagtgctta
      661 ccagactatg cgtaaacata acgaaccttc cctggaggca gaacgcgatg cgttgcggga
      721 ggaagtcgcc cgactgaatc aggaaatacg ccgccggcag atggagctgg atatcctgaa
      781 aaaggcggag gaaatcataa aaaaagaccc gggcatcagt atcagtcacc tgaacaacag
      841 agaaaaaaca aagatcgctg atgccctgag acaaacatat cccctgacag aattactgca
      901 tgttctgggc cttgcccgta gcagttattt ttatcaccgg gctgccctga aagccggtga
      961 taaatacgcc acgatacgta cgatgctgac agatatattt aacagtaatt accagtgtta
     1021 tggctatcgt cgcctgcatg cgatgctcag gcatgagggg gttcggctat cagaaaaggt
     1081 tgtacgcaga cttatggtgg aggaacagct tgtcgtcagc cgtaaccgtc gtcgccgcta
     1141 cagctcatat tgcggagaaa tcggaccggc tccggataac cttatcgcca gagattttaa
     1201 ggcggagcaa cctaatcaga aatggctgac agatatcacg gagttccagc tccctgcagg
     1261 taaagtctgg ctgtcaccgg tggtggactg cttcgatgga aaagttgtga gccggtactc
     1321 tcagtacacg ccccgatgct gaactggtca acactatgct ggatagcgct gtcgaaacgt
     1381 taaatgctgg cgaacgaccg gtgatacaca gtgacagagg tgggcattat cgctggccag
     1441 gctggctgga aagagtgaat gcagcaggtc ttattcgctc aatgtcccgt aaaggacgtt
     1501 cacctgataa tgctgcatgc gaaggctttt tcggcagact gaaaacggaa atgtattatg
     1561 ggcgtaaatg gtcgggcatc acgctagaaa agttcatgca gcatgtagat gcttacatca
     1621 gatggtataa cgagcggcgt ataaaattat cgctgggtgc agtcagccct gaaatgtacc
     1681 gccaacaatg cgggctggaa tgataaagca gtccaggaaa tcgtccgcat ccctattacc
     1741 gtcttatatc actggcgctg acaggcaaac cgggtacgcg atctgttgcc ctggaaagtt
     1801 gatctgacct ctcagtaaat atcaatacgg ttctggcgag ccgcttacaa tcagggcagc
     1861 agtaatcaga atcagaacag gaggaaaaag agaataatca cagggaaggt gatgtatttt
     1921 ccgacaggcc ataaacagag aaggcggggg aaaagaacgg gcgtcgcagg cgcacgttca
     1981 tccccgttcc cggagggaaa cggccttcct ggcagtctgg ttgttcatgc ccgcacaatg
     2041 ccagcaagga gaaaggggcc accggcgaac cagcagcccc tttataaagg cgcttcagtg
     2101 cagtcagacc agcatcagcc ctgaaaaggc gggcctgcgc ccgcctccag gttgctactt
     2161 accgccggat tcgtaagcca ttgttgccgt aacttccctg tatccgtcct tcagccggac
     2221 ttcgcacagg cgattccggg tcaggagtgt gaatatcaac aatgtgcagc acacgattaa
     2281 tacgcaccag ataagggcgt ttcccggtag tttcatggtt tactcctcct tgcaatttgc
     2341 acggtaagag ggcatactga cgtggactag acatgcagag gcctcgtggg ttaatgaaaa
     2401 ttaactacgg ggcttttgtc cttctgccac acaacaggat aacaaaccac cttcacgtca
     2461 tgaggcagaa agcctcaagc gccgggcaca tcatagccca tatacctgca cgctgaccac
     2521 actcactttc cctgaaaata atctggtcgt tcagccagtt cacggtaagc ggctcgccag
     2581 aaccgtattg atatttactg agaggtcaga tcaactttcc agggcaacag atcgcgtacc
     2641 cggtttgccg gccagtcctg gatgagccgg ttacagttca cgggcaatcc gtgtgattgt
     2701 tgccgcatca cgctgcctcc cggagtttgt tcggcaccat ccaccgctcc atctcacgga
     2761 cagcgtttcc agtcgatgcc ctcaagaagc atggataact gggccggagt aaggtgcacc
     2821 ttgc
//
LOCUS       DAJVTL010000266         2796 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.270, whole genome shotgun sequence.
ACCESSION   DAJVTL010000266 DAJVTL010000000
VERSION     DAJVTL010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.270"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(108..537)
                     /locus_tag="OQQ26_004399"
                     /pseudo
     CDS             complement(108..537)
                     /locus_tag="OQQ26_004399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(585..950)
                     /locus_tag="OQQ26_004400"
     CDS             complement(585..950)
                     /locus_tag="OQQ26_004400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859605.1"
                     /translation="MARSAKPRKRKPAPQRSKLLRYVVKLHEDDFFDEEEAEVLRFDN
                     FDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATIPAGISADG
                     MYCPECGTVHWPDGVIPPF"
     gene            complement(1703..2176)
                     /locus_tag="OQQ26_004401"
                     /pseudo
     CDS             complement(1703..2176)
                     /locus_tag="OQQ26_004401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708890.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2104..2470)
                     /locus_tag="OQQ26_004402"
                     /pseudo
     CDS             complement(2104..2470)
                     /locus_tag="OQQ26_004402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(2472..2796)
                     /locus_tag="OQQ26_004403"
                     /pseudo
     CDS             complement(2472..2796)
                     /locus_tag="OQQ26_004403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          625 a          820 c          638 g          713 t
ORIGIN      
        1 aatcggtata gacacttaat attgcttaca ttgattgatt caatgtatct ctgatggttt
       61 tttgctccgt tcccctcaac atggacgcaa cttcccctct gcgactctca gccgcaccac
      121 cgtattcgag ccagcggctc atgcatcata acctgctctg ccagacggta acccctcttc
      181 agccccgtaa accgcatctg acctccgcac agctcgcact tcagcgggtc aaccttcagt
      241 cactgctgat acatccctct ccttgtgatt tgcctcgccg tttttctcac tgtctccgtt
      301 atggcgtaca ccacatcttc cagtaatcgc cgcttcaccg gactcaggac cccgtatcac
      361 catccggaac cccttatccg ccacatgcca ggagaacctt tccataaact cgtcgccact
      421 catcacaagg ttttcttctc gttttgtccg gtggctgttg taacgcaggc caatttcatc
      481 ctgaccggca taatgttcca ggcggctcat ctgcaccggc tgcttctcca gccagttaag
      541 ccatcggttt ccctgctgaa aaatatcggc aaaacgggga agcatcagaa aggcggaata
      601 acgccatccg gccagtgaac cgtaccgcat tcagggcaat acatgccgtc ggcgctgata
      661 ccggcaggaa ttgtcgcaaa ttcccgctcc gtgcagcggg caatttccgg atacccttcg
      721 tcatcaacac gtacaaacca gaagaccagt tttttgtttc cggcatccac aaagaacgga
      781 atattcaggt ctgcgcaaca ctcaacggca tcgtcaaaat tatcaaagcg cagaacctca
      841 gcttcttctt cgtcaaaaaa atcatcttcg tgaagtttta cgacatagcg gaggagtttg
      901 cttctttgag gtgcaggttt tcgtttgcgt ggtttagctg aacgggccat ataactacct
      961 gaaagacaat gatattgtct gtttttataa cggtaatcac aggccatgat aagccgcagc
     1021 cgtcaggccg cctactcggg gcggtttaga acgcttattt agtaccagat cttacttata
     1081 ataaaggggc ttggcagttt ggataaacta ttgtccttat tccactaata caaacttttt
     1141 gtaaagtata ttaaatatac ttcatttcat actgaaatcc ccggaagtat tcaatcaaac
     1201 aattacacca taaaaggaag agggggcccc aattaagttg tcaagcatgt ttactgcgca
     1261 atcgcttggt gctccgtccc tgtaccccgc attggtactc tggcgctcat ggggcttcca
     1321 cttgctcttc tcccttcaca tcggggtgac aggtccacgt tccccacaag agcctgaatc
     1381 gacttcacgc cgcttttatg ccggatgccg cgcaggcagt aaacatatcc cacaggaacg
     1441 actccaccat tgttttgaca tcatctatat gctttcgaca catcatcagc ggttcacttt
     1501 cgttcgtctc ttcgaaccat acctgatcgg ctcacgtccg accttttccc atctcgctca
     1561 ccaccacatc tcttaaatgc agcagcagtg gatggtttgg tgcctgcgcc tgcacgccga
     1621 caccgagggg ccttccctca tctcttgtgc cgcatggctg cacagggact cacgtctcca
     1681 ggacgcgcct tcgtggcaca cagtcatcgg catagcaaca gtaagcaacg gcaggtttcc
     1741 attgccagtt ttctttgaca gcagtacttc ggcctcgctg gatgctgtga ttccagtacc
     1801 agcgatcctt tctggctttt ccactcaggt agcgtttatt cagatactgg tcgaactcat
     1861 tcagtatgct gttcgacagc aacggcgaga tcacaccgcc ctgtggcata ctttcactga
     1921 ccgcccggaa gagaccaaca tcaacacggc gttttccaca gcagtctcat aaaacgtgca
     1981 tcactgatcc tgcggcagac ggctttcatc agcagccggt gatgtactgt gtcgaagtag
     2041 ctggacaggt caccttcaat aacccggcgc cccgtgtttc cccgcagtcg gtgagctgta
     2101 atagtacgtg atgtctcccg cccacttctg gttcgggcca ctggcgtaaa aatcctgcgt
     2161 cagcagattt tctgatacag gcaggccgtg tgcacggtaa ctgatcgggc tgaacttctg
     2221 ggaggctttt gcgctcagtt cctgacggcg cagactggct gccacggttt ttacgttaaa
     2281 gtggtaacca gagcacacag ttcatccgtc aggcgtgggg caccgtaacg ctggactggg
     2341 taaaagcctt gcggacaacg ctgtcgcagt gctgacggaa ctgctgacgt gtgtttatcc
     2401 ttgtccgccg ctgacaccac gtataccagc cgctgcgggc cacccggagt acgcggcaca
     2461 ttgccttgat gacggtttac gcggtcgcct gcggcaacgg ctttccggct gacggtagtg
     2521 tggacctttt taccccggag aacaccggca agccccataa ccgccatgag acgtgccaca
     2581 gtgcatctgg ccactctgat accttcccgt aacaactgat gccagacttt acgcacagcg
     2641 tatacctgat gattctcatc gtatacgcgc agtatctctt tcttcagcca gtcatcgcgc
     2701 tgcgcacggg cactgcgttt atcatgatga tgtcgctgtt gctgacagtg gtaatacgtt
     2761 gacggggcaa tatgcagttc actgcatacc ggtccg
//
LOCUS       DAJVTL010000267         2771 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.271, whole genome shotgun sequence.
ACCESSION   DAJVTL010000267 DAJVTL010000000
VERSION     DAJVTL010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.271"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..208
                     /locus_tag="OQQ26_004404"
     CDS             <1..208
                     /locus_tag="OQQ26_004404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000053174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859606.1"
                     /translation="NIIGGVKGIRDLIDGYALKAIKENYPQWEAVGIQLLSKCVRGNE
                     LTQSGKEIWQSMVNDMSDTVMGNM"
     gene            209..433
                     /locus_tag="OQQ26_004405"
     CDS             209..433
                     /locus_tag="OQQ26_004405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000687973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859607.1"
                     /translation="MKIQYQDYGAVANIVITSSRLTLQKHNRVVDAVLFNVQGIYENR
                     SGFFWVKSSLSGKTLDILRAYKIVQREAKR"
     gene            534..1163
                     /locus_tag="OQQ26_004406"
     CDS             534..1163
                     /locus_tag="OQQ26_004406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859608.1"
                     /translation="MSKIKNPVVLIHKRENSDSYAVAITCGCLDYHDAVLMATMEPDM
                     SGDDVDTWSKTGYYMAQEIERLKHALSAAENNLIDSECLVAELSKAKDHAFGLVDTYD
                     RQRQRLHAAAEKVIKWCRQEAEHRTGDPEKAENYACVKELRVALTFCKSSGDIRKKGL
                     TITLPDITSKAFWSGTGKSAKFHPETYKRWVKEAIKRDCVIAGIGVEVK"
     gene            1251..1493
                     /locus_tag="OQQ26_004407"
     CDS             1251..1493
                     /locus_tag="OQQ26_004407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1859609.1"
                     /translation="MFALIQSGQIYTDSAGYPIKIIRCINNSVLYRRMDGRTQSVKIN
                     DFNELFERIDHQEYRQILVETEQEAHLKKLRAMKRK"
     gene            1497..1643
                     /locus_tag="OQQ26_004408"
     CDS             1497..1643
                     /locus_tag="OQQ26_004408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859610.1"
                     /translation="MNKAFELWVRQRYGNRYDLTRDVDGFYCREVVKRMFEVWCHCRG
                     LKVL"
     gene            1651..1905
                     /locus_tag="OQQ26_004409"
     CDS             1651..1905
                     /locus_tag="OQQ26_004409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase family protein"
                     /protein_id="HCS1859611.1"
                     /translation="MQTIIYQITPSKWCTESTLIASTGLKPGTIERARKKSWLQGKEY
                     RHYAVDGIPKSNSECVYNIEEIMRWIENQKQPGVKNASSG"
     gene            1939..>2771
                     /locus_tag="OQQ26_004410"
     CDS             1939..>2771
                     /locus_tag="OQQ26_004410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3596 domain-containing protein"
                     /protein_id="HCS1859612.1"
                     /translation="MSNTSYPTGVENHGGSLRIWFHYNGKRVRENLGVPDTAKNRKIA
                     GDLRTSVCFAIRMGSFDYAAQFPESPNLKHFGLGKREITIKALSERWLELKKIEICAN
                     ALNRYQSVIKNMLPMLGEKRLVSSVTKEDLLFVRRDLLTGYQKLSNGKISSIKGRSVV
                     TVNYYMTTIAGMFQFATDNGYTSGNPFNGLTPLKKSKIEPDPLTRDEFIRFIEACRHQ
                     QTKNLWIIAVYTGIRHGELVSLAWEDIDLKARTITIRRNYTKLGEFTPPKTDAGTGRT
                     I"
BASE COUNT          869 a          575 c          671 g          656 t
ORIGIN      
        1 aaacatcatc ggtggggtta aaggcatcag ggacttaatc gatggttatg ctctgaaggc
       61 tatcaaagaa aattaccccc aatgggaagc cgttggtatt cagctgttaa gcaaatgcgt
      121 tcgtggaaac gagctgacgc aaagcggcaa agaaatctgg cagagcatgg ttaacgacat
      181 gagcgatacc gttatgggga acatgtaaat gaaaatccaa taccaggact atggcgccgt
      241 agcgaacatc gtgatcacca gttcccgcct gacattgcaa aagcataacc gcgttgttga
      301 tgcggtactg tttaatgtac aggggatcta tgaaaaccgc agcggctttt tctgggttaa
      361 gtcatcgttg tcaggaaaaa cactcgacat cctgcgcgcc tacaaaatcg tacagcggga
      421 ggcaaagcga tgaagtcatt cctcctgtcc atgctgtttg gtctgctgct ggcgtccgtc
      481 gttttcggtg cgctgattga atataaattt ttaatgaatt actgaggtgc gggatgagca
      541 agatcaaaaa cccagttgta cttatccata aacgagaaaa tagtgactcc tacgccgttg
      601 caatcacctg cggttgcttg gactatcacg acgccgttct gatggcgacg atggaaccgg
      661 atatgagtgg cgatgatgta gatacctgga gcaaaaccgg ttactacatg gctcaagaaa
      721 tcgagcgact gaaacatgca ctgtccgctg cggaaaataa tctgattgat tccgaatgcc
      781 tcgtcgctga attaagcaaa gcaaaggatc atgcatttgg gctggtcgac acatacgacc
      841 ggcaacgtca gcgtctccac gcagccgctg agaaagtcat caaatggtgc agacaagaag
      901 ctgaacaccg taccggcgat ccagagaaag cagaaaacta tgcgtgcgtt aaagaactac
      961 gcgtcgcatt aactttttgc aaaagttctg gagacatcag gaagaaaggt ctgaccatca
     1021 ccctgcccga tatcacatca aaggcattct ggagcggtac tggaaaaagc gcaaaattcc
     1081 atccggaaac ctataaacgc tgggtgaaag aagctatcaa acgggattgt gttattgccg
     1141 ggatcggcgt ggaggtgaaa tgatgaattg gcctgaagca ttcaccgcag taggagttgc
     1201 aatagcggtg gcatttattc tgtattcact tttccgctgg ggataaagga atgttcgctc
     1261 tgattcaaag tggtcagata tacaccgata gtgctggcta cccgataaaa attattcgct
     1321 gcataaacaa ctctgtgttg tacagaagaa tggatgggcg aacacagtcg gtaaaaataa
     1381 acgattttaa tgaactgttt gaacggatcg atcaccagga ataccgacaa attctggtag
     1441 aaacagagca ggaagctcat ttgaaaaaat tacgagccat gaaaaggaag tagcgaatga
     1501 ataaagcgtt tgagctatgg gtacgccagc gttacggcaa tcgttatgac ctgacgcgag
     1561 atgttgacgg tttctactgc cgtgaagttg tgaaacgaat gtttgaggtg tggtgccact
     1621 gccgtgggct gaaagtttta tgaggttgac atgcagacaa tcatctatca aataacacca
     1681 agtaaatggt gtacagaaag caccctcatt gcttcgacag ggctaaaacc aggcaccatt
     1741 gagcgagcca ggaaaaaatc atggctacag gggaaagaat atcgacatta cgctgtcgat
     1801 ggaattccga agagcaacag tgaatgcgta tacaacatag aggaaattat gcgctggatc
     1861 gaaaatcaga aacaaccagg tgttaaaaat gcaagttctg gttaacctgt taatgctcct
     1921 ggacgtctgg gaggtttaat gagtaataca tcatacccaa caggcgttga aaatcatggc
     1981 ggatcactcc gcatatggtt tcactataac ggcaaacgtg tcagagaaaa cctcggtgtt
     2041 cctgacaccg ccaaaaaccg gaaaatcgca ggtgacctcc gcacttccgt ttgttttgca
     2101 atcagaatgg ggagtttcga ctatgcagca cagttccctg agtcccctaa cctgaaacac
     2161 tttggtctgg ggaaaagaga gataactatt aaagcacttt cggaaagatg gcttgaactg
     2221 aagaaaatag agatttgtgc aaatgcactt aaccgttacc agtcagtaat taaaaacatg
     2281 ttgccaatgt taggtgaaaa aagactggtt tcatctgtaa caaaagagga tttgcttttc
     2341 gtaaggagag atctgttgac cggttatcaa aagctttcta acggaaaaat ttcttccata
     2401 aaaggacgct cagtggtcac agtaaactac tatatgacaa ccatagctgg aatgtttcaa
     2461 tttgcaacag ataatggtta tacatcagga aatccattta acggtctgac accattaaaa
     2521 aagtccaaga tagaaccaga tcccctcacc cgtgacgaat ttattcgttt tattgaggct
     2581 tgccgtcatc aacaaacaaa aaacctgtgg attatcgctg tatacacggg tattcgtcac
     2641 ggggagctgg tatcactggc ctgggaagat atagacctta aagcgaggac tataaccatc
     2701 cgccggaatt atacaaaact aggcgaattc actccaccaa aaactgatgc tggtaccgga
     2761 agaacgattc a
//
LOCUS       DAJVTL010000268         2764 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.272, whole genome shotgun sequence.
ACCESSION   DAJVTL010000268 DAJVTL010000000
VERSION     DAJVTL010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.272"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(138..1187)
                     /locus_tag="OQQ26_004411"
     CDS             complement(138..1187)
                     /locus_tag="OQQ26_004411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HCS1859613.1"
                     /translation="MRVLLRPVLVPELGLVIVKPGRESMPVFHNTRLLVEPEPKSMRN
                     LPSGVVPAARQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHH
                     SETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERE
                     LSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQR
                     TKNLAPLPHAHQQQNPPQEKTVVSIAVDPESPESFMKRPKRRRWVNEKYTRWVKTQPC
                     ACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFEEKHGSQVDL
                     IFRFLDHAFATGVLG"
     gene            complement(1189..1467)
                     /locus_tag="OQQ26_004412"
     CDS             complement(1189..1467)
                     /locus_tag="OQQ26_004412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859614.1"
                     /translation="MAHDTKLHNSDDSAVFASRCGRRFHAFKSDWFQHPPCTEEQAEW
                     IIQCYRRRGYEVKKALSLDYRHWIISVRLPYSERPPRPSRTFQQRIWR"
     gene            complement(1926..2081)
                     /gene="hokD"
                     /locus_tag="OQQ26_004413"
     CDS             complement(1926..2081)
                     /gene="hokD"
                     /locus_tag="OQQ26_004413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokD"
                     /protein_id="HCS1859615.1"
                     /translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF
                     TVYEPEE"
BASE COUNT          721 a          693 c          630 g          720 t
ORIGIN      
        1 cgaacaataa gcgccacagc ccggcgataa cgctttccct cctccgagat aaaatatgtg
       61 ctgccacggc gtcgccagta agtgttcacc gtcggcgggt aaggtaaaac caaatctatg
      121 agcatcagtc acctctttta cccaagcacg ccagttgcaa aggcgtgatc aagaaaacga
      181 aaaattaaat caacctgaga accatgcttt tcttcgaacg ccagcggatc cgcatgaagc
      241 tcgttgtgat gctcccgaca cagcggtagc gtgaaaatat cgtgagattt tgtccccatt
      301 ccgccctgac catgaccaat caggtgatgg ggatcgtcgg ctggcttacc acaacacgca
      361 cacggctgtg tcttcaccca gcgtgtgtat ttctcgttaa cccagcggcg acgtttaggt
      421 cgtttcatga aagattccgg agactcagga tcaacggcaa tgctgaccac cgtcttttcc
      481 tgtggtgggt tctgttgctg gtgggcgtga ggcagcggcg caagattttt tgtgcgctgt
      541 ttcagtatgc tggtggcggt ctgctctccc ggtacgatgt cgctttcacg gtacattgag
      601 cggatttttt ccgcacgcaa cccaagcgaa cgacgtaata ccgcttccgg tagcgcgtcc
      661 gccacctgat tgcggaccgc ccaccaggat aattcagcca gagataattc acgctcctgc
      721 gtaccgctta ttgcgtgacc gatgacgtca atcatccatg ctgacaggtt ttgatgagca
      781 agttgctcga gtgattcgga tgtctggtca cgcagctggt tgtcgcagtg ccagcacaac
      841 accattgcgc cggtaccata acggtgaatg acggtttcgc tgtgatgata atcgccgtgt
      901 ggccactggc aggatttaat atggcgcaac agccagtcag acaatgcacc agcaccacca
      961 gcagcacgaa tcacccgtgc gttactgaaa aacggcagca atgttttgtc ttccaccagc
     1021 ggctggcgag cggcaggaac gaccccggac ggcagattac gcatgctttt cggttccggc
     1081 tccaccagta accgggtatt gtggaatacc ggcatggatt cacggcccgg cttaacgatc
     1141 accagcccga gttccggtac cagaacaggt cgaagtaata cccgcacgtt acctccagat
     1201 gcgttgctgg aatgtgcggg acggacgcgg tgggcgttcg gagtaaggca atctgactga
     1261 gattatccag tgacggtagt cgaggctaag ggctttttta acctcgtatc cgcgcctgcg
     1321 gtaacactga attatccatt cagcctgctc ttcagtgcat ggtggatgct ggaaccagtc
     1381 cgatttgaat gcatgaaaac gccgtccgca cctgctggca aagacggcag aatcatcaga
     1441 attgtgtaat ttggtatcgt gcgccatcgg ttgtctctgc tggcgcagca ggtgccagtt
     1501 gttcaggctg gcgtataaag tataaataaa ctggttccag tgtaaagccc ctacattaat
     1561 ggaataaaag tcaaacaaca gattgttggg ataaacacaa cgcttattat taaaagcgat
     1621 tagataaatt aaattttaat gttatgcaat tttaccagat caccataaca tctcgtttga
     1681 aaccaccgaa acaacaacca tatcaatatt gattatgtta aagtgagtaa atatggaaaa
     1741 caacaaatct gcacattacg ctcctttttt atctgtgata ctttttgttt tatgctgtgt
     1801 gtgggcatta tttttataaa aatatttaca gataaaataa acccgccgaa gcgggttaag
     1861 tgcgggtgca ttgaggatgc ctgacacatc agaggtggcg agggatttct ccctcgccgg
     1921 gtctcttact cctcaggttc gtaaactgtg aagacagcga cctccgtctg gccggttcgg
     1981 attcgtacct cgcagaggtc tttcctcgtt accagtgccg tcactatgac ggttaaacag
     2041 atgacgatca gggcgattaa catcgccttt tgctgcttca tagcctgctt ctccttgacc
     2101 tttcggtccg taagaggcta atctctatgt gtcgcataga tatggcctca gattaatgtt
     2161 aaacgtcttg caggacgcgt aatgttacct ggggcttttc tctatctgcc gttggtgttc
     2221 atgcccgagg cagatagcct caagcacccg cagtcattct acttaactaa gatttccccg
     2281 caaaccgttt ttgtccagca caataaatat ccaactaaac caatggagtt cgctgtattt
     2341 accgccagta ttcaatgcac atgaccgcca tgaacacccc taaaaaaagg gcatttatat
     2401 atccaaatat taatatcaaa acatcaactt tttccatata ccttgctgtg aagatgatgg
     2461 gcatacatga tacgaacaac cagaacgcaa caaacaaaaa ctgcaatgcg tttttcatta
     2521 ttcctcctac aatcaatgtg caattacatt taaacacacc tcaatttggc cggacatata
     2581 aatatctaaa ctagaaaaaa tcacttacat agcgttacaa actctttagt ctaaaggttc
     2641 atcgtaaaac attccccata cttatcagtc cgttccgcgc caggtagctt attgccttat
     2701 ctggcaacct ataatcaggt ttccgctttt tcagttggct ggtcgtttaa ccgacatagt
     2761 taac
//
LOCUS       DAJVTL010000269         2706 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.273, whole genome shotgun sequence.
ACCESSION   DAJVTL010000269 DAJVTL010000000
VERSION     DAJVTL010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.273"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            219..326
                     /locus_tag="OQQ26_004414"
     CDS             219..326
                     /locus_tag="OQQ26_004414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCS1859616.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            702..809
                     /locus_tag="OQQ26_004415"
     CDS             702..809
                     /locus_tag="OQQ26_004415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCS1859617.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            1185..1292
                     /locus_tag="OQQ26_004416"
     CDS             1185..1292
                     /locus_tag="OQQ26_004416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HCS1859618.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(1379..>2706)
                     /gene="bcsG"
                     /locus_tag="OQQ26_004417"
     CDS             complement(1379..>2706)
                     /gene="bcsG"
                     /locus_tag="OQQ26_004417"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HCS1859619.1"
                     /translation="IGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLW
                     PAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKR
                     KSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYS
                     GPAAIRLLRASCGQTSHTNLYQPVNNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEV
                     RENGGMQTELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLP
                     LHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRM
                     QVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIDQPSSLLAISDLVVRVLDGKIF
                     TEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
BASE COUNT          667 a          684 c          757 g          598 t
ORIGIN      
        1 ccggaacaga aaaacagtcg tagaatcagc gtcaagccgg aaggattccg gtgaggcgca
       61 atgttgcggg ggcttaatcc ctggtggcat tggttgctgg agagagaaaa cccccgcacg
      121 ttgcaggtat gcacctgaca acaccacggg agccattctt gcatccaaac aatacaagaa
      181 tagccgcgaa acgttgtcat tacaatacag gcggctatat gacgctcgca gaactgggca
      241 tggccttctg gcatgattta gcggctccgg tcattgctgg tattcttgcc agtatgatcg
      301 tgaactggct gaacaagcgg aagtaacgtg ccatgcgggc gtcaggctgc cgtaatggca
      361 atttgcgccc ggaccaggcc gcaggggtga aactctgcgg cctttttcgt aagaaaaatg
      421 caacggttgc aagcggataa tattctgcgg aatgcgcagc acagagtgaa gacgtgacgg
      481 attccggaac agaaaaacag tcgtagaatc agcgtcaagc cggaagggtt ccggtgaggc
      541 gcaatgttgc gggggcttta tccctggtgg cattggttgc tggagagaga aaacccccgc
      601 acgttgcagg tatgcacctg acaacatcac gggggccatt cttgaacctg aacaactcaa
      661 gaatagccgc gaaacgttgt cattacaaca caggcggcta tatgacgctc gcagaactgg
      721 gcatggcctt ctggcatgat ttagcggctc cggtcattgc tggcattctt gccagtatga
      781 tcgtgaactg gctgaacaag cggaagtaac gtgtcatgcg ggcgtcaggc tgccgtaatg
      841 gcaatttgcg cccggaccag gccgcagggg tgaaactctg cggccttttt cgtaagaaaa
      901 atgcaacgat tgcacgcgga taatattctg cggaatgcgc agcacagagt gaagacgtga
      961 cggattccgg aacagaaaaa cagtcgtaga atcagcggca agccggaaag gttccggtga
     1021 ggcgcaatgt tgcgggggct taatccctgg tggcattggt tgctggagag agaaaacccc
     1081 cgcacgttgc aggtatgcac ctgacaacat cacgggggct aatcttgaac ccaaacaact
     1141 caagaatagc cgcgaaacgt tggcattaca acacaggcgg ctatatgacg ctcgcagaac
     1201 tgggcatggc cttctggcat gatttagcgg ctccggtcat tgctggcatt cttgccagta
     1261 tgatcgtgaa ctggctgaat aagcggaagt aacgtgtcat gcgggcgtca ggctgccgta
     1321 atggcaattt gcgcccggat caggccgcag aggttaaact ctgcggcctt tttcgtgctt
     1381 actgcgggta aggcacccag tcgccgccgt tcaggcgaac gtacggttta tcctggtatt
     1441 gaataactac tgcatttgag ttctcggaga ccggtgctgt ttgtggcaac ccactggtga
     1501 gttttttcca gtcaacattg tcttcggtga aaatcttgcc atcaagaacg cgaaccacca
     1561 gatcggagat agccaggagg ctgctcggtt ggtcgatgac aatcggtgcc ccctgatgtg
     1621 gtgccttcat gccgaagaat ttcaccccaa cggggacgtc tgtgatagac gggctaggga
     1681 tatcacgtag gccagatacc tgcattctgt cgcccttcag cgcgccgccg tgttccggca
     1741 ccacgaccac catcacttta cgacccgatt tctccagttc agtaaagaag gcgtccagtt
     1801 catcaaagaa tttctgcgcc cgcgctttgt aatccgctgt tttgctgacc cccggataat
     1861 ggttgccgtc atgcagtgga agcgtgttgt agaacgtggc actacggctg tttttatctt
     1921 tttcggtaac gtccagccag cggttaagca cggcggtatc gtcataaacc ggcgaaccat
     1981 caaagcccag caaaataacc ggcagatttg tttgatccat caattcagtc tgcatgccgc
     2041 cattttcgcg aacttctttc aaaaaaccgc cgaactggcc gttatgtccc atcatcaggt
     2101 gctgggtaaa gcccagtttc gaaaggttat caaacagata gcagtcgtta tttaccggtt
     2161 gatacagatt agtgtgcgaa gtctgcccgc agctggcgcg cagtaaacgg atcgccgccg
     2221 ggccactgta ggaggtggcg gagttaaagt tcttgaactc aatatcgaaa tgcgaccaca
     2281 gtggatgcga catcaacccg gcggcttcta tatccgacca ggaaagcgaa cagatgttaa
     2341 tcaccagtag ttcaaatggc tgagcatcag cgggcagcga agacgggaag gtcgatttac
     2401 gtttcgcctc cgcgttatag aaattattca gccaggcgtt aaggttcgcc gttgttggcg
     2461 gtgcagtttg tgcgggcata tcacccacta ccggtgcgcc acccgtcgcc gcaacggttg
     2521 ccgctgcgtt accacccgtc gttgttacag tggtcgtcgg ttgtccggct ggccacaagg
     2581 agaaacttgg tcccgccagg gtaagtacgt tcagccatag cagtatggca accacaaaaa
     2641 cggtaatgcg aatccattgt gacaggaata accaggccac taataaaaca aaaatggccc
     2701 caatca
//
LOCUS       DAJVTL010000270         2670 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.274, whole genome shotgun sequence.
ACCESSION   DAJVTL010000270 DAJVTL010000000
VERSION     DAJVTL010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.274"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            389..1045
                     /locus_tag="OQQ26_004418"
     CDS             389..1045
                     /locus_tag="OQQ26_004418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015967619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1859620.1"
                     /translation="MKSLGERLINARQKAGLTQDALAKKAGVTRVAISKAEQGLTKSF
                     NGDTLFKVAAALQCSPQWLQNGDEKGKYWENNVKSCPQRDTAHSYPVINWVQAGLFAT
                     AGDDYNMYDQDNWRHSVKYAGERGFWLEVHGDSMTSPIGITFPEGMSILVNPDKEVFS
                     GCYVIARKKSTNEATFKKYISEMGKAFLKPLNPQYPIIEMDNDCEIVGVVVDARWDIF
                     "
     gene            1142..1504
                     /locus_tag="OQQ26_004419"
     CDS             1142..1504
                     /locus_tag="OQQ26_004419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001617650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1859621.1"
                     /translation="MINKATTLDCLEELKNLGSLITLIAKATPDATLSSDIESCAGLA
                     WDMTNSISRKLSSAMLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEVIIQWES
                     GEYEPTISMLIPLANILG"
     gene            complement(1533..1793)
                     /locus_tag="OQQ26_004420"
     CDS             complement(1533..1793)
                     /locus_tag="OQQ26_004420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001406054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859622.1"
                     /translation="MFSNFFMASSADLYVLLYSESQKCFHIETVSAMIDKNVRMYLEG
                     RSGDYVTIGIGSSVEELREIRSKLVEMRYGVAAPHFLVAPEE"
     gene            1933..2139
                     /locus_tag="OQQ26_004421"
     CDS             1933..2139
                     /locus_tag="OQQ26_004421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000141088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859623.1"
                     /translation="MTETTSQQDNYEGICLEPDSFAVNVYHLLHATQVLHTSSNNETK
                     TLGSEILNFACEYAKAAVEKELAQ"
     gene            2335..>2670
                     /locus_tag="OQQ26_004422"
     CDS             2335..>2670
                     /locus_tag="OQQ26_004422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859624.1"
                     /translation="MTHEPINTYRRRIAVAALHRIKRKTGGDLLIVDLLDGNITTIEI
                     TEQFINQLLLRFEGITRGELGRVEGETEIRTAYQNAIGINQHTEYQAETGKLIIDNLL
                     QEVIDYAKEK"
BASE COUNT          861 a          566 c          564 g          679 t
ORIGIN      
        1 gattggggca atcgaaattg ttgccccatc gtatttaata gttatttttt cgctcatatc
       61 accaccatca cttctcatcc tctgtgtgcg ctaagcttgg atgtgtatat ggaatgttcg
      121 gatccagatg gcagagaatg gcaacatcct ccggaacgcc ccgcgttttc cactttccaa
      181 ctccctgact accacgaggc tttcctttct ttgggaacct gcggccaata gcggcattgg
      241 ttttaaattg agtttttaat atttcataaa gggtcattct ttagcctcac accggatact
      301 ctgttatcca agaatgttaa acatgagaat ccaaagtatc aagacattct gttactttag
      361 tatcagcagc catgaaagga gaagaaaaat gaaatcttta ggtgaacgcc tcatcaacgc
      421 acgacaaaaa gctgggttaa cgcaagatgc gttggctaaa aaagctgggg tcaccagagt
      481 tgcaatcagt aaagccgagc aaggtcttac aaaaagtttc aacggtgaca cgctttttaa
      541 agtcgcagcg gcactgcagt gttcaccgca gtggcttcag aacggagatg aaaaaggtaa
      601 gtattgggaa aataatgtta agagctgtcc ccagagagac acagcacact cttaccctgt
      661 aattaactgg gttcaggcag gattattcgc aactgcaggt gatgactaca acatgtatga
      721 tcaggataat tggaggcatt ctgtaaaata cgctggtgag aggggcttct ggctggaagt
      781 acacggagac tcaatgactt cgcctatagg aataacattt cctgaaggaa tgtcgatcct
      841 tgtcaatcca gataaagaag ttttttcagg gtgttacgtc atcgccagaa aaaaatccac
      901 caatgaagca acattcaaaa aatatatttc tgaaatgggg aaggcgtttc taaagcccct
      961 taatccacaa tatcccatca tagaaatgga caatgattgc gaaatagtag gtgttgtggt
     1021 tgatgccagg tgggatattt tctgaccaga tacaaaaaga aaccaaagta tcaaaaacta
     1081 cttgccatgc tttgatacct tagttaccat gaaacaaagt tcgtaactgg ggtatcatct
     1141 catgatcaat aaagctacaa ctcttgactg tctcgaagaa ctgaaaaacc tcggcagcct
     1201 cattacacta atagcaaaag caacaccaga tgctacgctc tctagcgata tagagtcatg
     1261 cgcaggactg gcatgggata tgacaaatag catatccaga aagctatcgt cagcaatgct
     1321 tttacagaac aaaaattctg caatcaacaa ccgtcttcgc acccaacgcg aagcctgcgg
     1381 cttaacaacc gccgaactcg ccaggctgct cgatctcgat gaagaagtca tcatccagtg
     1441 ggagagcgga gagtatgaac caactatcag tatgcttatc ccactggcaa atattcttgg
     1501 ctgagatccg atgtggctgt taactggcgc ggttactcct ccggtgcaac caaaaagtga
     1561 ggagcagcaa caccataacg catctcaaca agtttgctcc ttatctcgcg aagctcttct
     1621 acggaagaac caataccaat ggtgacataa tcgccgcttc gcccctcaag gtacatgcga
     1681 acatttttat caatcattgc ggaaacagtc tcaatatgaa aacacttctg agactcgcta
     1741 tatagcagaa catataagtc agctgaggaa gccatgaaaa agttcgaaaa cataactgtt
     1801 ctccatgttg ataactttga ttatacaaac caggaacttc tcccggaggt tgtaaaggca
     1861 atagatgttg ccgatatagt gattagagga aagagaattg tcaaaaacag gctcgcatgc
     1921 acttcaggag caatgacaga aacaacctca cagcaagata attacgaagg catttgtctg
     1981 gagcctgatt catttgcggt aaatgtttat catttattgc atgcaacaca ggtgttacat
     2041 acgtccagta ataacgaaac aaaaacactt ggcagtgaaa ttctgaattt tgcatgtgag
     2101 tatgcaaaag ccgctgttga aaaagaatta gcgcaataac aacaaatatg ccctgaacgt
     2161 ttattgcggt tttatcgctg gggattgtta caaccttaat ccacaggagg ctttattatg
     2221 acttttataa agaatatggc atcacacaag accgccagcc ttattgcaca atacggtgaa
     2281 aattacatgc atattgcctg cttatttctg cgtaaagcat acgggaaata acaaatgaca
     2341 catgaaccca ttaatacata tcgtcgccgt atagctgttg cggcactcca tagaataaaa
     2401 cgtaaaacag gtggtgatct gcttattgtt gaccttctgg atgggaacat tacgaccata
     2461 gaaataacag aacagtttat aaaccagttg ctgttacgct ttgaaggtat tacccgtggt
     2521 gaattgggcc gagtggaggg tgaaaccgaa atccgcactg cataccagaa tgctatcggg
     2581 attaatcaac atactgaata ccaggctgaa accggaaagt taattataga caacctttta
     2641 caagaggtta ttgattacgc gaaagaaaaa
//
LOCUS       DAJVTL010000271         2567 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.275, whole genome shotgun sequence.
ACCESSION   DAJVTL010000271 DAJVTL010000000
VERSION     DAJVTL010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.275"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..1206
                     /locus_tag="OQQ26_004423"
     CDS             <1..1206
                     /locus_tag="OQQ26_004423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-NAD(P)-binding protein"
                     /protein_id="HCS1859625.1"
                     /translation="DLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYF
                     PSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQNVVFHRDNASEK
                     LNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVIRLIVEEIK
                     FADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRY
                     VILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHI
                     LALGEDYEMEFNESRIVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGD
                     EIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPAS
                     RARRRLSFD"
     gene            complement(1218..2030)
                     /locus_tag="OQQ26_004424"
     CDS             complement(1218..2030)
                     /locus_tag="OQQ26_004424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859626.1"
                     /translation="MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYT
                     DWAESLVEYAWKKWLADENFAHQEVSSMQKLAPDPGEIPFCSQFARSDDHARIDCCED
                     NARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRI
                     ANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTG
                     VVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC"
     gene            complement(2034..2567)
                     /locus_tag="OQQ26_004425"
                     /pseudo
     CDS             complement(2034..2567)
                     /locus_tag="OQQ26_004425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707568.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="thiosulfate reductase cytochrome B subunit"
BASE COUNT          678 a          672 c          612 g          605 t
ORIGIN      
        1 gatctgcaaa ttacaaatgc tggcgtcatg ctcgctacaa atcaggattt acccagcgag
       61 acgtttgatt tagcggtgat cgccacgggt cacgtctggc ctgatgaaga agaagcaacc
      121 cgaacgtatt ttcccagccc gtggtcaggc ctgatggaag caaaggtcga tgcgtgtaac
      181 gtgggtatta tgggaacatc cttgagcgga ctggatgcgg caatggcagt ggctattcag
      241 catggttcgt tcattgaaga tgataaacaa aacgtcgttt ttcaccgcga taacgcaagt
      301 gaaaagctaa atatcacgtt gatgtcgcgc acgggtattt tacccgaagc cgatttctat
      361 tgccctattc cctacgagcc cttacacatc gtcaccgatc aggcattaaa tgctgagatt
      421 caaaaaggcg aagagggcct tttggatcgg gtaattagat tgatagtaga ggaaatcaaa
      481 tttgctgatc cagactggag ccaacgcata gccttagaga gcctgaatgt cgattccttt
      541 gctcaagcct ggtttgccga gcgcaaacaa cgcgacccat ttgactgggc agaaaaaaat
      601 ctccaggaag tcgaacgcaa taaacgagaa aaacatactg ttccctggcg ttatgtcatt
      661 ctgcgcctgc atgaagccgt acaggaaatt gttcctcatc tgaatgaaca cgaccataaa
      721 cggttcagta aaggccttgc cagggttttc atcgataatt atgcggcaat cccttcagag
      781 tctattcgtc gactactggc cttacgtgaa gcggggatca ttcatattct cgccctcggt
      841 gaagactacg aaatggaatt taatgagtcg cgcatcgtcc tgaaaacgga agacaacagc
      901 tactcgtttg acgtttttat tgatgcccgc gggcagcgtc cgcttaaagt gaaagatatt
      961 cctttccctg gactacgcga acaattacag aaaacagggg atgaaatccc tgatgttggc
     1021 gaagattata cgttacagca acccgaagat attcgtgggc gcgtagcgtt cggcgcgttg
     1081 ccctggttga tgcacgacca gcctttcgtt cagggactta cggcatgtgc agaaattggt
     1141 gaggcgatgg ctcgggcggt cgtaaaacct gcatcccgtg cacgccggcg tctttcgttt
     1201 gattaacggt aaagctatca gcactcaaca aactgatgct gttcattaag acgatagcgg
     1261 actccggttc gaatattgtt ttcaccttca atggcgacgg cgaagcgaac tctttcgccg
     1321 tcatgatatg ccagtgcggc gcttccccct ggcccgagaa taattgagtc gaccacgccc
     1381 gtgctcacta ccgttgaatt ttcaccgctg gcaatgatgt gtacattgtc gccgctgttg
     1441 gcaattctgg cgtttgcgcc aaagctggcg atttgcacca ggtcaccatt actggcgaca
     1501 tgacaccgtt cacccaatgt acaaacgcgt actcgcattc cggtattcgc aatccgacta
     1561 ctatctccag cgctgcttat ccgcgaagaa ttaccggtta cagcaacccg tgcgcgttca
     1621 ccggagctgc caatgtgact gttaaagccg acacttccaa tccgcacgct ataacccata
     1681 ctggcaattt gcgcggcata cccagcggtt gcgattcggg cgttatcctc acaacagtcg
     1741 atgcgagcat gatcgtcgct gcgggcaaac tgactgcaaa atggtatctc tccggggtct
     1801 ggggccagtt tttgcataga ggaaacttcc tgatgcgcga agttttcatc cgccagccat
     1861 tttttccacg catactcaac cagactctcc gcccagtccg tatatccttc ctcaatcagt
     1921 gcatgatgaa tatcggcata actaccgccg cgtgggaaat ggcgcaggaa ccagcgatac
     1981 atcaccgctc cgatacgcca ttctcgcagg tctgctcgtg taatgatcat tcgttagtgc
     2041 cggtgatagc catcgaccat gcttttaaag gtttcgtgtg gcgtacgccc cgtggtgcaa
     2101 agataaagat gaccgaagat aaaaaagagg cttataaatg ccagagcaaa atgcgcctgc
     2161 aataaccagt atcttacgcc aggaaacaca tctcccacgg cttgcggata gagacacaac
     2221 agccccgtca atagtaacaa cggcagcaat ccatacatga caccaacata ggcgacctgc
     2281 tgtaagggat taaattgttg ccgggaaagg atgttcttcc ccctgcataa tgccaaacaa
     2341 ataaaatcgc gtttgttttg ccgctcgttc cagccacccc tgacgacgaa tgcgatagtg
     2401 gtgaccatta tccccaacgg cattgatcag cacaaagccg agccagcatg ccagtaacaa
     2461 aaatccgcaa acttcatgca ccgcaaccag acttttaacc gcagttgcgc ccaccatcgc
     2521 aaagtgattt atcagcccac ttgccagcaa caatacaaag agtaacg
//
LOCUS       DAJVTL010000272         2561 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.276, whole genome shotgun sequence.
ACCESSION   DAJVTL010000272 DAJVTL010000000
VERSION     DAJVTL010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.276"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>2561
                     /locus_tag="OQQ26_004426"
     rRNA            <1..>2561
                     /locus_tag="OQQ26_004426"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          666 a          563 c          808 g          524 t
ORIGIN      
        1 ccagagcctg aatcagtgtg tgtgttagtg gaagcgtctg gaaaggcgcg cgatacaggg
       61 tgacagcccc gtacacaaaa atgcacatgc tgtgagctcg atgagtaggg cgggacacgt
      121 ggtatcctgt ctgaatatgg ggggaccatc ctccaaggct aaatactcct gactgaccga
      181 tagtgaacca gtaccgtgag ggaaaggcga aaagaacccc ggcgagggga gtgaaaaaga
      241 acctgaaacc gtgtacgtac aagcagtggg agcctcttta tggggtgact gcgtaccttt
      301 tgtataatgg gtcagcgact tatattctgt agcaaggtta accgaatagg ggagccgaag
      361 ggaaaccgag tcttaactgg gcgttaagtt gcagggtata gacccgaaac ccggtgatct
      421 agccatgggc aggttgaagg ttgggtaaca ctaactggag gaccgaaccg actaatgttg
      481 aaaaattagc ggatgacttg tggctggggg tgaaaggcca atcaaaccgg gagatagctg
      541 gttctccccg aaagctattt aggtagcgcc tcgtgaattc atctccgggg gtagagcact
      601 gtttcggcaa gggggtcatc ccgacttacc aacccgatgc aaactgcgaa taccggagaa
      661 tgttatcacg ggagacacac ggcgggtgct aacgtccgtc gtgaagaggg aaacaaccca
      721 gaccgccagc taaggtccca aagtcatggt taagtgggaa acgatgtggg aaggcccaga
      781 cagccaggat gttggcttag aagcagccat catttaaaga aagcgtaata gctcactggt
      841 cgagtcggcc tgcgcggaag atgtaacggg gctaaaccat gcaccgaagc tgcggcagcg
      901 acgcttatgc gttgttgggt aggggagcgt tctgtaagcc tgtgaaggtg tgctgtgagg
      961 catgctggag gtatcagaag tgcgaatgct gacataagta acgataaagc gggtgaaaag
     1021 cccgctcgcc ggaagaccaa gggttcctgt ccaacgttaa tcggggcagg gtgagtcgac
     1081 ccctaaggcg aggccgaaag gcgtagtcga tgggaaacag gttaatattc ctgtacttgg
     1141 tgttactgcg aaggggggac ggagaaggct atgttggccg ggcgacggtt gtcccggttt
     1201 aagcgtgtag gctgattttc caggcaaatc cggaaaatca aggctgaggc gtgatgacga
     1261 ggcactacgg tgctgaagca acaaatgccc tgcttccagg aaaagcctct aagcatcagg
     1321 taacatcaaa tcgtacccca aaccgacaca ggtggtcagg tagagaatac caaggcgctt
     1381 gagagaactc gggtgaagga actaggcaaa atggtgccgt aacttcggga gaaggcacgc
     1441 tgatatgtag gtgaagtccc tcgcggatgg agctgaaatc agtcgaagat accagctggc
     1501 tgcaactgtt tattaaaaac acagcactgt gcaaacacga aagtggacgt atacggtgtg
     1561 acgcctgccc ggtgccggaa ggttaattga tggggtcagc gcaagcgaag ctcttgatcg
     1621 aagccccggt aaacggcggc cgtaactata acggtcctaa ggtagcgaaa ttccttgtcg
     1681 ggtaagttcc gacctgcacg aatggcgtaa tgatggccag gctgtctcca cccgagactc
     1741 agtgaaattg aactcgctgt gaagatgcag tgtacccgcg gcaagacgga aagaccccgt
     1801 gaacctttac tatagcttga cactgaacat tgagccttga tgtgtaggat aggtgggagg
     1861 cttagaagtg tggacgccag tctgcatgga gccggccttg aaataccacc ctttaatgtt
     1921 tgatgttcta acgtggaccc gtaatccggg ttgcggacag tgtctggtgg gtagtttgac
     1981 tggggcggtc tcctcctaaa gagtaacgga ggagcacgaa ggttggctaa tcctggtcgg
     2041 acatcaggag gttagtgcaa tggcataagc cagcttgact gcgagcgtga cggcgcgagc
     2101 aggtgcgaaa gcaggtcata gtgatccggt ggttctgaat ggaagggcca tcgctcaacg
     2161 gataaaaggt actccgggga taacaggctg ataccgccca agagttcata tcgacggcgg
     2221 tgtttggcac ctcgatgtcg gctcatcaca tcctggggct gaagtaggtc ccaagggtat
     2281 ggctgttcgc catttaaagt ggtacgcgag ctgggtttag aacgtcgtga gacagttcgg
     2341 tccctatctg ccgtgggcgc tggagaactg aggggggctg ctcctagtac gagaggaccg
     2401 gagtggacgc atcactggtg ttcgggttgt catgccaatg gcactgcccg gtagctaaat
     2461 gcggaagaga taagtgctga aagcatctaa gcacgaaact tgccccgaga tgagttctcc
     2521 ctgactcctt gagagtcctg aaggaacgtt gaagacgacg a
//
LOCUS       DAJVTL010000273         2557 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.277, whole genome shotgun sequence.
ACCESSION   DAJVTL010000273 DAJVTL010000000
VERSION     DAJVTL010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.277"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..2440)
                     /locus_tag="OQQ26_004427"
     CDS             complement(<1..2440)
                     /locus_tag="OQQ26_004427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HCS1859627.1"
                     /translation="MDENALGFTSYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGR
                     LDEAIVSKFFKGEKDDVETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSR
                     EGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETD
                     EEREARYAALQQEWRQYLYDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASS
                     HILSLYDHLLVCNKDVPLFNRFASREVHAAESLLAPGAKFSDRLGHSRDKFPLAKAQR
                     DALSHFLDARHGDILAVNGPPGTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQ
                     AVTNIIEAFGKDFSQGSGAMAGRWLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVE
                     SKEYVEDALLFYLEKAKAAFPEKECSSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQ
                     IRAARELIANDIEQYLNNLNKLLSGQEQKITLLKSAKTEWKKYRAGESLIYSLFSWLP
                     AVRSKRQYQIQLFLEDKLGALIAENQWSDPETIERNIDGLLNSAEREQTTYRQQIDSA
                     HEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQADELADTQIRFPAFLLTTHYWEGRW
                     LMDMARIDDLQDEKKKKGAKGVTARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKF
                     EKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVIGDTEQIPPIWSIAPAIDVSN
                     MLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQFASRYQYDPELARGMYLYE
                     HRRCYDNIIGYCNTL"
BASE COUNT          634 a          655 c          562 g          706 t
ORIGIN      
        1 agagcgtatt acagtatcca ataatattgt cgtagcaccg gcggtgttca tataggtaca
       61 taccacgagc cagttcggga tcatattgat agcgcgaagc aaactgcgct attttcataa
      121 cgctgccaga tgcggcactt ttaccaaggt ctgcgattgc cgtatatttc tcggtaatct
      181 cttcttgcgt actgccagac agaatttttt ccgccagcat gttactgaca tcaatcgcag
      241 gagcaatact ccatattggc gggatctgct ccgtatcgcc aatcactaat gccttcttag
      301 ctaatgcaaa cgaggcagca gccacttcag gaagcacctg cccggcttca tcgacaatga
      361 gtaaatcggc aaaatcatac aaataacttt tctcgaattt acgctgtcct ttgtgctcac
      421 ttatctgcat attgccgggc agcatatagc atgtcatcac cacacatggc gtgagtttca
      481 ttcgacgttg ccaacgggcg gttacccctt tagcaccttt tttcttcttc tcgtcctgca
      541 gatcatcaat tctggccata tccatcagcc aacgaccttc ccagtagtga gtcgtcagta
      601 aaaatgcagg gaagcgaatc tgcgtatcag ccagttcatc ggcctgtgag aagctcagtt
      661 cctcgtcgcc ctcataccct aaatcaaatg ccagcctctg ccactcctga accgcctgct
      721 gttctttaag aacgatttca tgggcggagt caatctgctg ccggtatgtt gtttgctcgc
      781 gctcagcgga attgagcagc ccatcaatat tacgttcgat agtttcagga tcagaccact
      841 gattttctgc aatcagcgca cctaatttat cttcgagaaa cagctgtatt tggtactgtc
      901 gcttactgcg aaccgccggg agccaggaaa ataatgagta gatcagtgat tcaccggcgc
      961 gatatttttt ccattccgtt ttagcactct tcagtagagt gattttttgt tcttgtccgg
     1021 aaagtaattt atttaaatta ttgagatatt gctcaatatc attagcaata agctcacgcg
     1081 cagcccgaat ctggcttaac gtttgccatg ttgcgttcag tcttatcagt tgctcggatt
     1141 ttgctgccaa ctgaccatgc aggagttcaa tgaccttttc aggggatgaa cactcttttt
     1201 caggaaaggc tgccttagcc ttttccagat aaaacagcag tgcatcttct acatactctt
     1261 ttgactcaac ctggttgaag aaatcttcag tttgatattt tttggctgct tcagctttac
     1321 ggctgcttga gggaaaataa gcgccgaagc ttttcagctc tggcaaccat cgcccggcca
     1381 tcgcacctga accttgcgaa aagtctttcc cgaatgcctc aataatgttc gttacagcct
     1441 ggttattcgt tgaagtcgcg ataataaccg gaggctcaga tttttcgaga gccgctctgg
     1501 cccactgcgt ggcgatgata gaaagcacca gcgtggtttt tccggttccc ggagggccat
     1561 taacagcaag gatatcgcca tgtctggcat ccagaaaatg gcttaaggca tcgcgctgag
     1621 cctttgccag cggaaactta tctctggagt gtccaagcct gtcgctgaat tttgctccag
     1681 gggccagcaa agactctgca gcatgaacct ctcgcgaggc gaagcgattg aagagcggca
     1741 catccttatt gcaaacaagc aggtgatcat aaagagaaag gatatgggaa ctggcaccgc
     1801 cagattgagc cgttttaaca atataaccgt gctcagcgag ttcatattgc tcaggttttt
     1861 caatccagtc gccggcaacg ctcttcagta gcctctctga gtcatacaga tattgacgcc
     1921 actcctgctg caaggcggca tatcgtgctt cccgttcttc atccgtttcg gcagtcttat
     1981 caacgctgtc atcaaagttg atagagaacg tggtatgggt cgtcttgtat ttgtcatact
     2041 gcccaatctc accaatcgaa aatgctcctt ttggcaaagg ttcaagcagg tctctgggaa
     2101 tggaggtcgc tggcgtcgga tataaaaaac cctcacggct tagcaaggct ggcgtcacta
     2161 tcggggtaac aatatcaggc gcacctgcag aacggtcctt accatgctgc agtaaccgga
     2221 aataaacttt tgggcgcaag atgacatcga ccgtttcgac atcgtctttt tctcccttaa
     2281 aaaatttact gacaatcgct tcgtcaagac gtcccgccgc tatcccatgc cagtgagtga
     2341 aatttttggc gtctttccgt tcaaaactgc cctttcctga ctcagcatcc gcaagcgagt
     2401 tgcgccagta tgaggtaaac cctaaagcat tttcatccat taccagtcct gtgactcaat
     2461 gaaatccatt gatttatcga atataaaacc accatatgga cgtaagcgcc ccatcagcga
     2521 cgtcttgtga aaattgtcct gtctggcaac aatcgcg
//
LOCUS       DAJVTL010000274         2488 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.278, whole genome shotgun sequence.
ACCESSION   DAJVTL010000274 DAJVTL010000000
VERSION     DAJVTL010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.278"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(874..1341)
                     /locus_tag="OQQ26_004428"
     CDS             complement(874..1341)
                     /locus_tag="OQQ26_004428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859628.1"
                     /translation="MRIDISHQTRHTPPNMLPREQNCVAMALSACFRQQLNPVVNSLL
                     KERIIHSPKELEHDNAVIRALQKLQIQEVCNSTPWETAKQQLLQKSDGRYFAINSKHL
                     AFPGPGESHAFCCIKYKNAIGINGNNAETQSTHYQPYPYDKVSIWGPFPHNLT"
     gene            2063..2245
                     /locus_tag="OQQ26_004429"
                     /pseudo
     CDS             2063..2245
                     /locus_tag="OQQ26_004429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001447730.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          565 a          618 c          635 g          670 t
ORIGIN      
        1 aaaaaaaaac acgtacagga cggggcagga tgtgcatttg tcggaccgcg cacgcgcact
       61 cagacagatg ccacctggtc agggcacagc cccgacacct tggacaacac cacagcaata
      121 agataaaacg tgcctgggtg cgtttctctg cctctttttt cattatctct gggattcgcg
      181 ctcacccgtc ctctgctgtc gggtttatgt atccccgtcg cccgtggaga tgaataacgg
      241 gccgggggat taaaaatccc cgtgccgcac agccagcgtt gcataaaatt ccgctctgcg
      301 gtgactattg tttaatcaaa aatccccgca gttcctccag aaaaacgcga gtctgttctc
      361 attcccagga tgcccacacc ccacgcaaaa ctaacttttt tctgatttgc tttttaaatc
      421 atgttgttat ggtttgaaaa atatattttc ttattcggat ttatacaaaa gcgggtcgtc
      481 ggcgactact ggatgactcg gcaacgagtc gtcggtgatt tatcgatgac tcaacacact
      541 gtcgctctgg tgttcagaga aggcgagtcg ccagagagtc gtgaggaaaa atactggatg
      601 actcgccgac gactcccgta gtgaatcgct cacgactcgt ctgtaactac agtctgattt
      661 cttcttatca gggctgaaaa cgtccgaaaa tacgccttat gggcatcaga cgcgcccaaa
      721 ccgatcgcca ttcagtttca tgcatagtca tgcaacgcgc tgaaagcgtt cctgacgcat
      781 ttttccggtt taccatgggg aaaaatccct tttttgcggt ttttgcgcca gaagcgcgct
      841 gagcgcgttt taacggtgcg tacaattaag atattacgtt aaattgtgag ggaatggtcc
      901 ccatatactg actttatcat agggataggg ttggtagtgg gtcgattggg tttcggcatt
      961 gtttccgtta atgccaattg catttttgta tttgatgcaa cagaaggcgt gagattctcc
     1021 tgggcctgga aaggctaagt gtttagaatt gatggcaaaa tatcttccgt ccgatttttg
     1081 aagtagttgt tgtttggctg tctcccaagg ggtgctgtta caaacttctt gaatttgtag
     1141 tttttgcagg gctcttatta ctgcgttgtc atgttccaat tctttagggg agtgtattat
     1201 tctctctttt aataagctgt ttaccacagg gtttagttgt tgtctaaagc acgcagataa
     1261 tgccattgct acacaatttt gttcccgagg aagcatgttt ggtggggtat gccgtgtttg
     1321 atgtgatatg tctattctca tagaagggct ctggcttata gcatcaacaa atacggctat
     1381 aaaacaaaat tttcatagag tgattcaaga tcttcttgag atcctttttt gcggcgcgta
     1441 atctgctgcc tgcaaacaaa aaaaccaccg ctaccaacgg tggtttgttt gccggaatct
     1501 agagctacca actctttctt ccgaaggtaa ctggcttggt ggagcacaga taccaaatgc
     1561 tgtccttcta gtgtagccgc agttaggcca ccacttcaag aactcttaat atctcaatcc
     1621 accttgtcca gttaccaatg gctgctgcca gtggcgttaa gtcgtgcctt ttccgggttg
     1681 gactcaagac gatagttacc ggataaggcg cagcggtcgg gctgaacggg gggttcgtgc
     1741 acacagccca gcttggagcg aacgacctac accgaactga gataccaaca gcgtgagcta
     1801 tgagaaagcg ccacgcttcc cgaagggaga aaggcggaca ggtatccggt aagcggcagg
     1861 gtcggaacag gagagcgcac gagggagctt ccggggggaa acgcctggta tctttatagt
     1921 cctgtcgggt ttcgccacct ctgacttgag cgtcgatttt tgtgatgctc gtcagggggg
     1981 cggagcctat ggaaaaacgc cagtggcgcg gctttttttc ctttttgctc acatgttctt
     2041 tccggcctta tcccctgatt cggtggataa ccgtatcgct gtttttgagc acgcagactc
     2101 cgctcgccgc agccgaacga ccgagcgcag cgagtcagtg agcgaggaag cggaaaagcg
     2161 cccggacgtg cattttctcc ttacgcatct gtgcgacatt tcactccctg catggtgcac
     2221 ttttcataca atccgcagtg atgccgcatg gttaagccag tatacactcc gctatcgcta
     2281 cgtgaccggg tcatggctgc gccccgacac ccgcaaggtc aacggcctga cgcgccctta
     2341 cgggcttgtc ggctcccggc atccgctcac aggcaagctg tggccgtctc cgggagctgc
     2401 ctgtatcagc ccgttatgcc atcatcgtcg aagcgttccc ggcaacgttg gtagcgttca
     2461 tccgccactt cgtgaagttg ttctggtg
//
LOCUS       DAJVTL010000275         2474 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.279, whole genome shotgun sequence.
ACCESSION   DAJVTL010000275 DAJVTL010000000
VERSION     DAJVTL010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.279"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..700)
                     /gene="citG"
                     /locus_tag="OQQ26_004430"
     CDS             complement(<1..700)
                     /gene="citG"
                     /locus_tag="OQQ26_004430"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
                     /protein_id="HCS1859629.1"
                     /translation="MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLEDR
                     INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM
                     FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTN
                     NSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL
                     LMAINGDTNVASRGG"
     gene            complement(675..1226)
                     /gene="citX"
                     /locus_tag="OQQ26_004431"
     CDS             complement(675..1226)
                     /gene="citX"
                     /locus_tag="OQQ26_004431"
                     /EC_number="2.7.7.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
                     /protein_id="HCS1859630.1"
                     /translation="MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFT
                     VVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPTR
                     DLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKT
                     HQLTDLLNRMEALLNDVDACNVN"
     gene            complement(1230..>2474)
                     /gene="citF"
                     /locus_tag="OQQ26_004432"
     CDS             complement(1230..>2474)
                     /gene="citF"
                     /locus_tag="OQQ26_004432"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HCS1859631.1"
                     /translation="SSSLSDCHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEP
                     VQIHSHGGRVHLVQSGELNIDVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNA
                     KQVVMLTEELLPYPHNPASIEQDQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIAR
                     SAADVIVNSGYFKEGFSMQTGTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDL
                     HEKGLIRKLLDVQSFDSHAAQSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSAL
                     EIDTQFNVNVLTGSDGVLRGASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCIT
                     PGSSVDILVTDHGIAVNPARPELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTD
                     RVVAVVRYRDGSVIDVVHQVKE"
BASE COUNT          552 a          694 c          712 g          516 t
ORIGIN      
        1 cgccaccgcg cgacgcaacg ttggtatcgc cgttgatcgc catcagtagg agcaaggtat
       61 cgagcaatgc cagttcagga tctaacccct gatccagcag agtgaggtaa tgcggcaagg
      121 cgtggttgat caccagtgga taacccgctt cggcttcacc gcgtgcgccg gtaaggccaa
      181 gctgctggta caaccgttga cctgccgtca gttgtgaatt attggtacgc agttcgcgat
      241 cggtcaggcc acggcagaaa cttgctgccg tagaacaaac ggttgttggc gttaccggct
      301 ggttgagctg aagcaaacgg ccaattgccg cacatagcag ccctaaagaa aaaatgctgc
      361 ctttatgcgt gtttacgccc gcagtagcgc ggaacatatc accttcgcaa gccataccaa
      421 ttgggcgtaa tccgtggagt accgcttccg gtgccatttc tgcactacag gcaccaaatt
      481 caatgaaacg gggtaaccag ccctgaatcg ccagcgcgct gcggtggaaa tcttccagcg
      541 ccatatcttt gtgcgcaccg cagttaatcc gatcctcgag gcctggtttc ggtgacagat
      601 tgacttcagt cagcatggcg cgccacccca gcagggcgta ctcatcgatt aatgacgtcg
      661 caagctttgt ggttttagtt gacgttgcag gcatcgacat cgttcagcag tgcctccatg
      721 cggttgagta aatcggtcag ttgatgggtt tttccacgcg cgcagacggc tgcgctttgc
      781 tcgcacaaca ggcagcggcg aggcggcagt gaatagtcgc ggcgggagag aatttcgcct
      841 tcgggcgtca gaacatcgat atcccataac cgcccgagag gatgactatg ttcaagctca
      901 atggtggcga gcttgaggtc gcgagtcggg gcggcaatgc tcaacatgcc ctccggcccg
      961 ctggcggaaa ccagtgcagc ctgctcctga atttgccagc cctgttttgc ggctaaggca
     1021 cgcaaggctg tcacgccatg attaaaaatt cggcgtgtga cctcactgtc tttaatcggc
     1081 ccaggcgcaa ccacggtaaa ggagaccagt ggaacaggat ggcgcttgag ccagacgtgt
     1141 tgccgtgctt gcctttcatc ccggctgacg agcagctcgg gaattgacac cgcatggtgg
     1201 ctggcgagtt caggaagcag gtgcatggct tattccttca cctgatgtac aacatcgatc
     1261 accgagccat cgcggtaacg cacaacggca acgacgcggt cggtgaattc aatcggctgt
     1321 ggttcaccgg tcagcagacg cgcacgttca cgcagccact caatggaaac cactttaatg
     1381 cccgcttcct gcagacgttc tgccagctcc ggacgtgccg ggttaactgc gataccgtgg
     1441 tctgtgacca gaatatcgac actggagccc ggggtgatgc aggtcagcac gttatccacc
     1501 agagtcggaa tacgaccgcg taccagcggc gcgacgatga tggaaagcgc agaggcaatc
     1561 gcggtatcgc agtgaccacc ggaagcacca cgcagtacgc cgtcagagcc ggtcagcacg
     1621 ttaacgttga actgggtgtc aatttccagc gcgctcagta ccaccacgtc gagacgatca
     1681 accgatgcgc ctttcgaacc ccagttagcg tactggttgg cgctgatttc gatgtgattg
     1741 gggttacggg ccagcgattg cgcagcatgg ctgtcaaagc tctgcacatc cagcagtttg
     1801 cggatcagac ctttttcgtg cagatcaacc atcgtcgcgg taataccgcc gagggcgaag
     1861 tcggcgcgaa tatcgcggct acgcattttg tcttccagga aacgggttac cgccagcgaa
     1921 gcgccgccgg tgccggtttg catggagaaa ccttctttga agtagccaga gttgacaatc
     1981 acatccgcag cgctacgggc aataagcagt tcgcgcgggt tagtggtcat acgggtagca
     2041 ccagcgccga tttttgcagc atcgccaacg cgatcaactt tgacgatcaa atcaacctga
     2101 tcttgctcaa tgcttgccgg attatgcgga taaggcagca gttcttcggt aagcatcacg
     2161 acctgttttg cgttgtcggc atcaaccatt gcatagccga gggagccaca gcaggcttta
     2221 ccggtgtagc cgttggcatt accgaattca tcacaggacg ggacgccgag gaaagccacg
     2281 tcgatattca gttcgccgct ctgtaccaga tgcacacgtc cgccgtgaga gtggatctgc
     2341 accggttctg ccagcagacc acgggagatc tcttccgcca gtggaccacg caggccggag
     2401 gtataaatgc gggtaaccac gccctggcga atgtgttcta ccagcggcgc atggcaatca
     2461 ctcagggagc tgga
//
LOCUS       DAJVTL010000276         2432 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.281, whole genome shotgun sequence.
ACCESSION   DAJVTL010000276 DAJVTL010000000
VERSION     DAJVTL010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.281"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(46..495)
                     /locus_tag="OQQ26_004433"
     CDS             complement(46..495)
                     /locus_tag="OQQ26_004433"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1859632.1"
                     /translation="MNNIQIRDYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQI
                     DESCWKEKLAKSQVWVAVINAQPVGFISRIERHIDMLFVDPEYTRRGVASALLKPLIK
                     SESELTVDASITAKPFFERYGFQIVKQHVECRGAWFTNFYMRYKPQH"
     gene            complement(492..1544)
                     /gene="dinB"
                     /locus_tag="OQQ26_004434"
     CDS             complement(492..1544)
                     /gene="dinB"
                     /locus_tag="OQQ26_004434"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HCS1859633.1"
                     /translation="MKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTAN
                     YPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLD
                     EAYLDVTDSVHCHGSATLIAQEIRQAIFSELQLTASAGVAPVKFLAKIASDMNKPNGQ
                     FVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEEMGLRTCGDVQKCDLVILLKRFGKFG
                     RILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKV
                     KPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLH
                     VTLLDPQMERQLVLGL"
     gene            1606..2432
                     /locus_tag="OQQ26_004435"
                     /pseudo
     CDS             1606..2432
                     /locus_tag="OQQ26_004435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001233549.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
BASE COUNT          647 a          591 c          566 g          628 t
ORIGIN      
        1 aagcgcagct atttaggcgg gcgttatttt cattgcaagc tggatttaat gttgcggttt
       61 atatcgcata taaaaattag taaaccacgc tccccggcat tcaacgtgct gcttaactat
      121 ctgaaaacca taacgttcaa aaaagggttt tgcggttatg ctggcgtcca ccgtaagttc
      181 ggattcagac ttaatcaaag gttttaacaa ggcgctggca accccgcggc gggtgtattc
      241 agggtcaaca aataacatat cgatatgacg ttcaatgcgg gaaataaaac caaccggttg
      301 tgcattaatg accgcaaccc acacttgtga tttcgcgagt ttctccttcc agcaagattc
      361 gtcaatctgc gcccaggcgg caatttgttg tggagaatag tgctgactgg cggtcatcgt
      421 aaccgctcta ataaaaatag cgcatagttg ctgaaaatcg ccaggctgat agtctcttat
      481 ttgtatgtta ttcataatcc cagcaccagt tgtctttcca tttgcggatc cagtagcgtc
      541 acatgcagcc ccaccagtcg cacaccgcgc ccgccgcggc gttcatccca ggttttacgc
      601 gcggtggcga ttaagtcagc tttattcagc cgcggccaga cgtgctcctg agtggtttgc
      661 tgaaaatcgt cgaactttaa tttcaccccc tggcgggcaa tcagtaaatc aggttttacc
      721 tttgccagac ggcgttcaag ttccggatac agccgctcga taatcgcttc acattcagac
      781 cagtggtgga tatcttccgc catcgtgcgt tccacgccga cggattttcg caaccgttcg
      841 ctgttaacgt cgcgctcgtc aatcccctga ctacgctccc acaaaatgcg gccaaatttg
      901 ccaaagcgtt taagcagaat caccagatca cacttttgta catcaccgca ggttcgtagc
      961 cccatctctt ccagttttgc cgccgagact ttgccgacgc cggggatttt tgccagcggt
     1021 aaggtttgta aaaatgccgg aacttctgcc ggcgtaatca caaactggcc gttgggttta
     1081 ttcatgtcgg aggcgatttt ggcgagaaac tttactggtg ccacgcccgc agacgccgtc
     1141 agttgcagct cgctgaaaat cgcctggcgg atttcctggg cgatgagggt cgcagaaccg
     1201 tggcaatgga cgctatcggt gacatcgaga taagcctcat ccagtgacaa cggttcaatg
     1261 cgcgaggtgt agcgcgagaa gatttcacgg atatgatttg aggcttcttt gtaggcgtca
     1321 aagcgccccg gaagcaaggt gagatgtggg cataatttga gcgccatccc tgtcggcata
     1381 gcgctacgta cgccaaattt acgcgcggga taattggcgg tgctgatcac ccctcgacgt
     1441 tcgcggctgc cgccaatagc aatagggata tcgcgcaggg cgggattgtc gcgcatctcc
     1501 accgctgcga aaaagcagtc catatccaca tgaatgattt tcacttccta aaacacccct
     1561 tataatctgg tcatagagtc attatagtac tggatgaata tacagatgag gaaggtttac
     1621 agttacattc gcttttcgtc aacgaaacaa gcttttggtg atagtcatcg aagacagagt
     1681 aaggccatac aggattggtt agccagccat ccagaccaca tcctagacga atctcttagt
     1741 tttgaagatt taggtcgttc agcttttcac ggtgaccatc taaaagaagg tggagcactc
     1801 agggcttttc ttgaagctgt taagcaaggt ctgataccgc cagattctgt cttgctggtg
     1861 gaatcgttag accgtgtaag ccgtcagtca atcagccatg cacaggaaac tatcagggct
     1921 attcttgagc aaggtattac ggttgtcact ctaagcgacg gtgaaacgta taaccgccaa
     1981 tctcttgatg attctctcgc attaatcaga atgattatcc tacaagagcg tagccataac
     2041 gagtctgtta ttaaatctga ccgtattaaa aaggtatggt cacataaacg acaacagttt
     2101 gaacaggatg gaacaaagat aaccggtaat tgccccggat ggttaaaact caattctgac
     2161 ggaaaatcat tttcgttaat acctcaccac gtagaaacaa ttcatagaat ctttgacgaa
     2221 aaactttcag gaaaatcact acatgcaatc gccagagatt taaatcttga aaacatcccc
     2281 accattacga ataaaaaggt agacacaggc tggacaccta caagatacgt gaccttttat
     2341 taaaggagtc tctaattggc gttgcttacg gagtcagtga ctatttcccc cctgctattt
     2401 caaaagaaaa gtttcatgcc gtacagatga tt
//
LOCUS       DAJVTL010000277         2404 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.282, whole genome shotgun sequence.
ACCESSION   DAJVTL010000277 DAJVTL010000000
VERSION     DAJVTL010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.282"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(338..604)
                     /locus_tag="OQQ26_004436"
     CDS             complement(338..604)
                     /locus_tag="OQQ26_004436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001449236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859634.1"
                     /translation="MLTQTIFPCLPQKQENIILEVSSPVLLSSTVTTDGYTVFNKKAA
                     IYELQIPAANRTKTLKFTATEMQWLTKINEAGIDEKQSQRYSDF"
     gene            complement(786..1187)
                     /locus_tag="OQQ26_004437"
                     /pseudo
     CDS             complement(786..1187)
                     /locus_tag="OQQ26_004437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            1616..2404
                     /gene="virF"
                     /locus_tag="OQQ26_004438"
     CDS             1616..2404
                     /gene="virF"
                     /locus_tag="OQQ26_004438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858179.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family invasion system transcriptional
                     regulator VirF"
                     /protein_id="HCS1859635.1"
                     /translation="MMDMGHKNKIDIKVRLHNYIILYAKRCSMTVSSGNETLTIDEGQ
                     IAFIERNIQINVSIKKSDSINPFEIISLDRNLLLSIIRIMEPIYSFQHSYSEEKRGLN
                     KKIFLLSEEEVSIDLFKSIKEMPFGKRKIYSLACLLSAVSDEEALYTSISIASSLSFS
                     DQIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLL
                     LNSQSYINDVSRLIGISSPSYFIRKFNEYYGITPKKFYLYHKKF"
BASE COUNT          740 a          429 c          448 g          787 t
ORIGIN      
        1 aagccgtcta tgggaaggag tctgctgtta ttccagagaa tggtaattca gtcatatatt
       61 tctccatcta tgacttgtca ataccatcct gatatttgtg ggtcagcaat atattctact
      121 aaaaggtatt taaggtcatt gcgtccctgc actcgaataa tggtgaagaa agcatgataa
      181 atatatcacg ataacgttca gcatgtatcg aggatagatg gagttactcc tctctgaaat
      241 agaatcactg ctctactttt ctgtttccag aaattatcag taacaaacct tgatatattc
      301 ttttgaaaat ggagcttaaa cgagtctgaa attaacttca gaaatcagaa taccgttggc
      361 tttgtttttc atcaattccg gcttcattta tctttgtcaa ccattgcatt tctgtagcag
      421 tgaatttcaa cgttttcgtc cggttggcag caggtatttg taattcgtat atagctgctt
      481 ttttattgaa aacagtatat ccatctgtag taacagtaga agataataat acaggacttg
      541 atacttcaag gatgatattt tcttgttttt gtggaaggca agggaatata gtttgtgtaa
      601 gcatattgct tccttatgtt atattttagt aaagaattta ttttttacat tatagtcggc
      661 taaatgaagt ttactgtaaa aaaacgatac ttttttcgta agcgatgaga tgtggagcca
      721 gaaaaatggc tgcgttacgt cattgaactg tccttgaccc acgatattca gacagtcgtt
      781 gtatcttaag ttgacattac ccgctgacgt cgatattccc ttggtgagag ataacccaac
      841 gcactatgcg gatggttttc attgtaatgc tcgatcgcca ctgcaaggtt atgcaatgcc
      901 gttcttggtt tcggcatgaa cgcgatgcag tcttccttca tcgttttcac gaaccgttct
      961 gctattccat tactctgagg gctactgact gccgtcgtgc agggctccag attcaactct
     1021 ctggcgaact gccgtgtttc atgagccgta taagccgaac cgttatcggc cactggattg
     1081 gccgttccgg tcctttatcg ccatatcgct cctgacatga catcctgcac cgttgctttg
     1141 tcataatctc ccgtgcctgc tgcccagtct atggcttcac gatcgcaata tggaacgtaa
     1201 cgctgtcatc gggagaatcg tcaatgcggc attcggttaa cgcttaccaa tatcaacacc
     1261 aaccggattt gtggagcctc cagtctgaag gggctttatg cgttccgtat aggatattat
     1321 gatgctggag ttttgcgaag ctccactcct ttccgaacat ttacacagat attgcctaag
     1381 aaaagtgaaa ccataatatg gttatagtcc ctttcagtgc aaatacttag cttgttgcac
     1441 agagaaatag aagctgcata agctctttct tcaaaaaatg taaataaagt taaatatagg
     1501 aaaaattact taatctatct taataacgga aagattttgt atacaatcac tgttacagaa
     1561 atttcttagt tactctgtaa acactaaata tagtttggta tattctgttg aatttatgat
     1621 ggatatggga cataaaaaca aaatagatat aaaggttcgc ttgcataact atattatttt
     1681 atatgcaaaa aggtgttcaa tgacggttag ctcaggcaat gaaactttga ctatcgatga
     1741 agggcaaatt gcttttatag agcgaaatat acaaataaac gtctccataa aaaaatctga
     1801 tagcattaat ccatttgaga ttataagcct tgacagaaat ttattattaa gcattattag
     1861 aataatggaa ccaatttatt catttcaaca ctcctattct gaggagaaaa gggggttaaa
     1921 caaaaaaata ttcctcctct ctgaggagga ggtttctatc gatttgttca aatctataaa
     1981 agagatgcct ttcggcaaaa gaaagatcta tagtttagct tgccttttat cagctgtttc
     2041 tgatgaggaa gctttatata cttcgatatc gatagcttct tctcttagtt tttctgatca
     2101 gataaggaag attgttgaaa aaaacatcga gaagagatgg cgtctttctg atatttcaaa
     2161 taacttgaat ttatcagaaa tagctgttag aaaacgattg gagagtgaaa aattaacatt
     2221 tcaacaaatc cttcttgata ttcgcatgca tcatgcagca aagcttttat tgaatagtca
     2281 aagctatatt aatgatgtat caagacttat cggaatatca agcccatctt attttataag
     2341 gaaatttaat gaatattatg gtataactcc aaagaaattt tacttatatc ataaaaaatt
     2401 ttaa
//
LOCUS       DAJVTL010000278         2366 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.283, whole genome shotgun sequence.
ACCESSION   DAJVTL010000278 DAJVTL010000000
VERSION     DAJVTL010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.283"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..90
                     /locus_tag="OQQ26_004439"
     CDS             <1..90
                     /locus_tag="OQQ26_004439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="HCS1859636.1"
                     /translation="RTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(206..475)
                     /locus_tag="OQQ26_004440"
     CDS             complement(206..475)
                     /locus_tag="OQQ26_004440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1859637.1"
                     /translation="MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEHIAPLQD
                     AVDLEIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPEEPDTM"
     gene            532..1200
                     /locus_tag="OQQ26_004441"
     CDS             532..1200
                     /locus_tag="OQQ26_004441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HCS1859638.1"
                     /translation="MVKLMKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEH
                     LLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHK
                     ISHDVFEPYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATI
                     LGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSA
                     SGKK"
     gene            1516..>2366
                     /locus_tag="OQQ26_004442"
     CDS             1516..>2366
                     /locus_tag="OQQ26_004442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1859639.1"
                     /translation="MLPVNNPPLSTGNVSFYRATSIDNVHNNYLSEWVEWTKNSISGE
                     NRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALK
                     ELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMS
                     LELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQL
                     SPRIMQTLLQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIW
                     HAFEHEE"
BASE COUNT          715 a          527 c          449 g          675 t
ORIGIN      
        1 cgcaccgcag ataaggattc tgcaaaaaca tttgttcagg agactctgaa agatacctgg
       61 gagtctgctg acgagtggtt tgttcactaa taaacacgta aaatcggtaa cggctggaaa
      121 tcattcaata ctcgtactat cgaaagttta ccagccaacc gcagcacgtc ctgcatacgt
      181 cgtgtctgcg ttttttcttt ttcgcttaca ttgtgtctgg ttcttccggc cactcaatat
      241 caggtgcagt tgatgtatca acacggttca gcaacacccg atacttcttc caggcttcca
      301 gcaacgagtt ttcttcctcc gttgcgatct ccagatctac agcatcctga agtggcgcaa
      361 tatgctcact gaattcctgg atgtagaact gtgtggtgac ggtcttccag ccattcggct
      421 cctgctgtat cgaagcatac caggctattt caatatcgct atgctgcggc agcatttaac
      481 cccttgtaat tcatcgccat aattgattta attcacaaat aaaactataa tatggtgaaa
      541 ttaatgaaaa aaaacacaga tgatggggct aaaatttaca caccacttac cctaaagctt
      601 tatgactggt gggttttggg agtatcaaat cggcttgcat ggggatgtcc tacaaaggaa
      661 caccttcttc cacactttct ggaacattta ggtaacaacc atctggatat tggtgttgga
      721 actgggtttt accttactca cgtacctgag agtagtctga tatctttaat ggatttgaac
      781 gaggctagcc tgaacgcggc atctacaagg gctggggaat caaaaattaa acataaaatt
      841 agccatgatg tttttgaacc ttatcccgcg gcgttacatg gtcaatttga ttccatttcc
      901 atgttttacc ttcttcactg cctgcctgga aatatatcta caaaaagctg tgtaatacgc
      961 aatgcggcgc aggccttaac tgatgatgga actctatacg gagccacaat tcttggcgat
     1021 ggagttgtgc acaatagctt cggtcaaaaa ctgatgcgca tttacaatca gaaaggcatc
     1081 ttttcaaaca caaaagattc cgaagaaggc ttaacacata tactctcaga gcatttcgag
     1141 aatgttaaaa ccaaggttca aggtactgta gtaatgtttt ccgcttcagg gaaaaaatag
     1201 catccaaccg cagcacgttc ttgcttaaga cgtgctacgg tttcctttac gatttggggt
     1261 tgcgacttta cctctattga taatgcattc cggcagaacg ttcaaatatg aacgtacgat
     1321 atttaactaa ccgaaaaaca aaatatagca caggcgagac atttaccatc taagaaaata
     1381 gtatcgtttt tttacagtta aatcaacatc acttccttaa aatgaaaaca ataaatttca
     1441 atcctgaaac attttatttc agcttattat ttcccagtat cacattttat caggatatcc
     1501 ttctgcgagg ttattatgct tcctgtaaat aatccccccc tatccactgg aaacgtctct
     1561 ttttacagag ctacatcaat cgacaatgtt cacaataatt atctctccga atgggttgaa
     1621 tggactaaaa acagcatttc cggagaaaac agggaaactg cttttacccg gctccaatta
     1681 tgtctggaga acagtgaaac atcgttggac ttatcttgtt taggtctcag atctctacca
     1741 cgattgcctg acaatcttga tgaaattaat gtaagcaata accaactatc aatgctcccc
     1801 gagctaccaa gggcattgaa agagctgaat gcaagcagta atcaattatc tgcacttcct
     1861 gaattaccag tgtcgctgga atatataaat gtgagtgata accatttgtt cgcacttcct
     1921 gaattacctg cgtcactaga atatattaat gtaagtgaca atcacctgtc tgtacttccg
     1981 aggttaccaa tgtcattgga attacttgat gcagccagaa atgctttgga agtaatacca
     2041 gattttccag aaagagatga tcatattata agaatattct ggcttaatca aaaccggatc
     2101 acggcaattc cggaaagcat acttggcctc agttctgata gcgttgtcaa tcttagagaa
     2161 aatcaactat ctcccagaat aatgcaaact ttgttacaac aaaccgccca accggactac
     2221 cacggcccac ggatttactt ctccatgagt gacggacaac agaatacact ccatcgcccc
     2281 ctggctgatg ccgtgacagc atggttcccg gaaaacaaac aatctgatgt atcacagata
     2341 tggcatgctt ttgaacatga agagca
//
LOCUS       DAJVTL010000279         2322 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.284, whole genome shotgun sequence.
ACCESSION   DAJVTL010000279 DAJVTL010000000
VERSION     DAJVTL010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.284"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..772)
                     /locus_tag="OQQ26_004443"
     CDS             complement(<1..772)
                     /locus_tag="OQQ26_004443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1859640.1"
                     /translation="MLPTNNNHRLISNSFSTYSIDTSRAYENYLTHWTEWKNNRIQEE
                     QRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLT
                     QLNVSYNRLIELPALPQGLKLLNASHNQLTTLPTLPISLKELHVSNNQLCSLPVLPEL
                     LETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLP
                     ENLRNGYFDINQISHIPESILNLRNECSIDISDNPLSSH"
     gene            complement(1373..1621)
                     /locus_tag="OQQ26_004444"
     CDS             complement(1373..1621)
                     /locus_tag="OQQ26_004444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI-like family protein"
                     /protein_id="HCS1859641.1"
                     /translation="MRIEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(1976..>2322)
                     /locus_tag="OQQ26_004445"
     CDS             complement(1976..>2322)
                     /locus_tag="OQQ26_004445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HCS1859642.1"
                     /translation="PAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRR
                     RGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIA
                     RVRSVEEILHAL"
BASE COUNT          603 a          429 c          553 g          737 t
ORIGIN      
        1 catgggatga caatgggtta tcactaatat ctattgaaca ttcattcctc agattaagaa
       61 tgctttccgg gatatgactt atctgattta tgtcaaaata accgttcctt aaattttccg
      121 gcaggtatgg aatatcggtt aacatattgt cgattgccca tatggagtga atgttgtgag
      181 gtagaggggg gagttcacta agaagattcc ctattgcgct aatctcttgt aaagaaaatg
      241 gtaaaggtgg taaaactgcc agcccattac atgatacatc taatgtttcc agtagttctg
      301 gtaaaacagg aagagaacat aattgattat ttgagacatg aagctccttc aaagatatgg
      361 ggagtgtggg tagtgtggtt agttgattgt gggacgcatt caataattta agtccttgag
      421 gcaaagcagg cagttcaata agtctgttat agctgacatt aagctgtgta agggacgcag
      481 gcaatgggga gattaagctt aaattatttt tacttatatt aattgattta attcccgggg
      541 ggatttcagg taatgttgtc aggcctaatt cagacaagtc caggttcgtc tcttggtttt
      601 gtagacatga tactagtcgc tgaaaagcga tgtctcgttg ttcttcttgt atgcggttat
      661 ttttccattc agtccaatgg gttagataat tttcatatgc gcggctagtg tcgattgaat
      721 aagtggagaa cgaatttgaa attaatctgt gattgttatt tgtcgggagc ataaatatca
      781 gggcgtattc tttatgttga gaggtgttgg attctttttt atctgctttg caatgttatt
      841 ggttcccttc agcagtagac aggaacttct ggaggaggcg gatatatagt ttgtgtaagc
      901 atattaactc catatattat atattgaaga acttctgctt tacactatcc taaactggat
      961 cggtttaatg taaaaaaacg atactttttg ggggaggggg caatttttcc ttaaggtatg
     1021 aaaaaaggag ctgaagctat ataatagcta ttaataccac tggtatcagt gaatcatgta
     1081 tataaaaaac tgtgttaagg aggctgtcca ttagcggttt tttattcttc tggaaccgcg
     1141 gcatctttgc gtatcttttt gtcttctcac cgtctggtcg gtgttttgct gagactgcta
     1201 atttcctgtc tttgctagtg ctgtactggt actgcccaat catgattggc gggggcgggc
     1261 ggagttgaga ccgcagacac gtcgtatgca agaacgtgct gcggctggct ggtgaacttc
     1321 cgatagtgcg agtattgaat gatttccagc cgttactgat tttacgtgct aattagtgaa
     1381 caaaccactc gtcagcagac tcccaggtat ctttcagagt ttcctggaca aaagttttag
     1441 ctgaatcttt atcggcggtg cgcgtaacag aaaggccatc gttgctggtg gcttttacga
     1501 tcacctctac atcgtcataa cgtttactga tgcgtcgggt taattcttcc tttaacgcat
     1561 ctacagcacc ggttggcatt ttagtcattt tctctttggc tatgcagatt tcaatacgca
     1621 taaaaatccc tctacactgt gtttttatac agtattattt ttaactgtat ggataaacag
     1681 tgtcaagagt gagggaaagt gattttttgg ggcatgcatg gggcaaaaat atttgttgtg
     1741 gggcattttg gggcatgatt gggacacttt gttacatatg aactttgccg attttcatat
     1801 gacatggcaa tccaacgctt tgattattct aaagaaaaca catgctcttg ggcgttcttt
     1861 agtgattttt aaaaatcccg tatcacgcag ttaaagtggc gggcatactc ttcaaggctg
     1921 gtgatcccca accgcaccca tttaggatgc gaccattgcg gtagaccgat gtaaatcata
     1981 acgcgtgaag gatctcttcc acactgcgca cacgggcgat gcgtgggtag atatggttga
     2041 tgctgttatt gtgctgctcg gcgctagcgg cactacaggc atcttcggca atcaccagat
     2101 taaagccaag ttcccaggca ttgcgggcgg tggattcaac accgatattg gtcgagatcc
     2161 cacataacac tattgtatcg atacctcggc ggcgtaattg caactccaga tccgtaccgt
     2221 aaaacgcacc ccactgacgt ttgatgattt cgatatcact gtcagttgca cctaatgcag
     2281 ctggatgttg ccaccagttt tcgggcaaca ctttagcggg gg
//
LOCUS       DAJVTL010000280         2293 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.285, whole genome shotgun sequence.
ACCESSION   DAJVTL010000280 DAJVTL010000000
VERSION     DAJVTL010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.285"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..331)
                     /locus_tag="OQQ26_004446"
     CDS             complement(<1..331)
                     /locus_tag="OQQ26_004446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859643.1"
                     /translation="MAHRLLIGKGMITLNLKRIFLTLTLLPLFAVAADDCALSDPTLT
                     VQAYTVNPQTERVKMYWQKANGEAWGTLHALLADMNSQGQVQMAMNGGIYDESYAPLG
                     LYIENGQQ"
     gene            701..1651
                     /gene="corA"
                     /locus_tag="OQQ26_004447"
     CDS             701..1651
                     /gene="corA"
                     /locus_tag="OQQ26_004447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HCS1859644.1"
                     /translation="MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
     gene            complement(1692..2072)
                     /locus_tag="OQQ26_004448"
     CDS             complement(1692..2072)
                     /locus_tag="OQQ26_004448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HCS1859645.1"
                     /translation="MSKEYMNDGSLSEKWKYRFNFYDQHGFPGFWGATPEYKAAFKAL
                     KVRQRLTIQMNFIAFFCSWIYLFVLGLWKKAIIVLLLGILSLFVGALIGVNILGIAVA
                     AYIAVNTNKWFYEKEVKGLNTWSL"
     gene            complement(2086..>2293)
                     /locus_tag="OQQ26_004449"
     CDS             complement(2086..>2293)
                     /locus_tag="OQQ26_004449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709624.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859646.1"
                     /translation="MNCQRLRDSGFIYIKIYVFGTLAVYIISIITMIAEDFACSGNGS
                     MIFLICYFSTFSMLMLAPTDSSKQ"
BASE COUNT          606 a          534 c          530 g          623 t
ORIGIN      
        1 tctgctgacc gttttcgatg tacaaaccga gcggcgcata gctttcatca tagatgccgc
       61 cgttcatcgc catctgcacc tgaccctgac tattcatatc cgccagcaga gcatgtaaag
      121 ttccccacgc ttcgccattg gctttttgcc agtacatttt cacccgctct gtttgaggat
      181 taacggtata cgcctgtacg gtcagcgtcg gatctgagag tgcgcaatca tcagcggcaa
      241 cagcaaacaa gggaagtaag gtgagggtga gaaaaatccg tttgagattc aaggtgatca
      301 ttcctttacc aatgagtagc cgatgcgcca ttataggtcc tggatgtggg atttttttat
      361 cctgttagcg accttgacga gtaccaaaaa gcgcgaagtt caactattgt tctgtggtgt
      421 tctgttgcgt gttgacggca aaattttgct ggcgtaacat gcgcgcacga tcactctaag
      481 aggacattcg ccttggacac acccagtaga tactggctca ctatcctgtc atccaggatc
      541 aactcctaag gctatccctt tttgctgata gccttagcgg ttgtcagcga cctcaatttt
      601 tcccgtcgcg ctgagtcagg ctgtttaatg gtctgaaacc caatttgttt ctgtgtgccc
      661 accgaactgt ccgatatttt aagcattggg agtcccggtc atgctgagcg catttcaact
      721 ggaaaataac cgactgaccc ggctggaagt cgaagagtca caaccccttg taaatgcagt
      781 atggattgat cttgtcgaac cggacgacga cgagcgactg cgcgtacaat ctgaacttgg
      841 ccagagcctg gcaacccgcc cggaactgga agacatcgaa gcatcggcac gtttctttga
      901 agacgatgac ggcctgcata ttcactcctt cttcttcttt gaagatgcgg aagatcacgc
      961 cggtaactcc actgtggcat ttaccatccg tgatggtcgt ctgtttactc tgcgtgagcg
     1021 tgaactgccc gcttttcgtc tgtatcgtat gcgtgcccgt agccagtcaa tggtggacgg
     1081 taacgcctac gagctgctgc tggatctgtt cgaaaccaaa atcgaacagt tggcagatga
     1141 aattgaaaat atctatagcg acctggagca gttgagccgg gtgattatgg aagggcatca
     1201 gggcgatgag tacgacgagg cgctctccac gctggcggaa ctggaagata tcggctggaa
     1261 agttcgcctg tgtctgatgg atacccagcg tgcgctcaac ttcctggtgc gtaaagcgcg
     1321 tttaccgggt gggcaactgg agcaggcgcg tgaaatcctg cgagatatcg aatccctgct
     1381 gccgcataac gaatccctgt tccagaaggt gaacttcctg atgcaggcgg caatgggttt
     1441 tatcaacatc gagcagaacc gcatcatcaa aattttctcg gtggtatccg tcgtgttcct
     1501 gccgccaacg ctggttgctt ccagctacgg gatgaacttt gagtttatgc cagaactgaa
     1561 gtggagtttc ggctaccctg gcgcgattat ctttatgatc ctcgcgggct tggcaccgta
     1621 tctgtacttt aagcggaaga actggttgta aaaagaaggc ggtggcttag cctggctaag
     1681 ccacctgtta ttcaaaggct ccaggtattt aaccctttta cctctttctc ataaaaccat
     1741 ttgttcgtgt taacagcaat ataggctgct acggcaattc ccagaatgtt aacgccaatt
     1801 aatgcaccaa caaatagaga tagaatgcca agtaatagaa ctataattgc ttttttccat
     1861 aagcccagaa caaataaata gatccaagaa cagaagaaag caatgaaatt catttgaata
     1921 gttaatcgtt gtcttacttt taatgcttta aatgctgctt tatattctgg tgttgctccc
     1981 cagaatccag gaaagccatg ttgatcataa aaattaaatc ggtatttcca tttttcactt
     2041 aatgaaccat cgttcatata ttccttactc ataaatactc cataactatt gttttgatga
     2101 atcagtaggt gcaagcatta gcatactgaa agtggaaaaa taacaaatca aaaaaatcat
     2161 cgaaccattg cctgaacagg caaaatcttc ggctatcatt gtgatgatag agatgatata
     2221 tactgctaat gtaccaaaaa cataaatttt tatatatatg aaaccactat cacggagtcg
     2281 ttggcaattc atg
//
LOCUS       DAJVTL010000281         2276 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.286, whole genome shotgun sequence.
ACCESSION   DAJVTL010000281 DAJVTL010000000
VERSION     DAJVTL010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.286"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..849)
                     /locus_tag="OQQ26_004450"
     CDS             complement(<1..849)
                     /locus_tag="OQQ26_004450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858398.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1859647.1"
                     /translation="MIKSTNIQAIGSGIMHQINNIYSLTPFSLPMELTPSCNEFYLKA
                     WSEWEKNGTPGEQRNIAFNRLKICLQNQEAELNLSELDLKTLPDLPPQITTLEIRKNL
                     LTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGDNKIKELPFLPENLTHLRVHN
                     NRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLALANNFIEQLPELPFSMNRAVL
                     MNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPRIFFSMGNSA
                     TISAPEH"
     gene            complement(1238..1504)
                     /gene="ospE2"
                     /locus_tag="OQQ26_004451"
     CDS             complement(1238..1504)
                     /gene="ospE2"
                     /locus_tag="OQQ26_004451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001449236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspE2"
                     /protein_id="HCS1859648.1"
                     /translation="MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAA
                     IYELQIPAANRTKTLKFTATEMQWLTKINEAGIDEKQSQRYSDF"
     gene            complement(1613..1743)
                     /locus_tag="OQQ26_004452"
                     /pseudo
     CDS             complement(1613..1743)
                     /locus_tag="OQQ26_004452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612303.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(1741..1836)
                     /locus_tag="OQQ26_004453"
                     /pseudo
     CDS             complement(1741..1836)
                     /locus_tag="OQQ26_004453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365624.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          649 a          388 c          490 g          749 t
ORIGIN      
        1 gtgttctgga gcggaaattg tggcagaatt tcccatagag aaaaatattc gaggaccaga
       61 ataatctggt ccggtggtta tttgttgtag tgtacgcatg gtatggccag acaatggatt
      121 acctgcaaca tttacgaagg cattctgagc taatctcagg acactttccg gaagtgttgt
      181 cagattatta ttcattagca cagccctgtt catactaaaa ggtaattccg gtagttgttc
      241 tataaaatta ttagccagag ccagcccttc aagcttatct ggaaaggggg gaatgctgtc
      301 taatctgttt ccagaaacta ccagtaattt tagttccggt ggcaatagtg gcagaatatg
      361 caatcggtta ttatgaaccc gtaaatgagt tagattttca ggaagaaatg gtaattcttt
      421 tatcttgtta tcacccgcat taagctcttc taacgtctcg ggtaaggcag gtaagctttc
      481 cagttgatta aattgagcat gtattacctt aagcattggt ggtaaatcag ggagatgtgt
      541 taataggttt tttcttattt ccagtgttgt tatctgaggc ggtaaatctg gtaatgtttt
      601 taaatctaac tcagataaat ttaattctgc ctcttgattt tgtaaacata tttttagcct
      661 attgaaggcg atattgcgtt gctcgcctgg ggtaccgttc ttttcccatt cactccaggc
      721 ttttaaataa aattcattac aagatggagt cagttccata ggtaaagaaa atggagttaa
      781 cgagtatata ttgtttattt gatgcataat gccagaaccg attgcctgta tattggttga
      841 tttaatcatt ataactagaa ttcttatcaa cgataagaat tctagtgaaa tagaatatag
      901 cttattaatt ttaaaacagt ttgctttgta ccctttctcc gggtattgct ttccccctaa
      961 gccgtctatg ggaaggagtc tgctgttatt cctgagaatg gtaattcagc cataaaaagg
     1021 tatttaaggt cattgcgtct ctccctgtac tcgaataatg gtgaagaaag catgatgaat
     1081 atatcacgat aacgttcagt acgtatcgag gatagatgga gttactcctc tctgaaatag
     1141 aattactgct ctattttttt ctgttttcag aagttattag taacaaaccc tgatatattt
     1201 ttttgaaaat ggagcttaaa cgagtctgaa attaacttca gaaatcagaa taccgttggc
     1261 tttgtttttc atcaattccg gcttcattta tctttgtcaa ccattgcatt tctgtagcag
     1321 tgaatttcaa cgttttcgtc cggttggcag caggtatttg taattcgtat atagctgctt
     1381 ttttattgaa aacagtatat ccatctgtag taacagtaga agataataat acaggatttg
     1441 atacttcaag gatgatattt tcttgttttt gtggaaggca agggaatata gtttgtgtaa
     1501 gcatattact tccttatgtt atattttggt aaaaaattta tttttttaca ttatagtcgg
     1561 ctaaatgaag tttactgtaa aaaaacgata ctttttcggg tggcgcttcc aatcagtaga
     1621 atatgtgttt ttcaatgaag gagccgatga cttttcgtgg atttccacgg aacgcgagaa
     1681 gcagattgtt ttacgtgcca gccgcttgat gcgggtgcgg agggtcaggt tgttacgttc
     1741 aagatatagc atgtgctgga tgaagatccc ttttctggtc acctgtttat ctttcgtggc
     1801 cgacggggtg acactgttaa aatgtaatga acgcatccca cacaattaaa cacggagtag
     1861 tatgatggtt aaaagggtga aactggcagg tgtggagcct cgcagctttc cggcatcata
     1921 ctgcccaata cgggatgcat aaagcgtcct cagactggag actccacaaa tgaaatatac
     1981 accggttggc gttgatatgg caaaacatgt cattcagatt cacttcatca atgagcacat
     2041 gtcagcgcca gtgatataag acggtaatgg ggatgcggac gatttcctgg actctcagaa
     2101 gatgaaacat gtttactgaa gaacaaaaaa ttcgcgctat tgagctttat ttcaaatatg
     2161 gtaagaagct tgaggtgtac tggcaatagc ggacaccacc atttgttctt tttctaagca
     2221 gtcatctgat aatattttat cctgaaggct gtcggggaga tattccccag acgaga
//
LOCUS       DAJVTL010000282         2250 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.287, whole genome shotgun sequence.
ACCESSION   DAJVTL010000282 DAJVTL010000000
VERSION     DAJVTL010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.287"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..759)
                     /locus_tag="OQQ26_004454"
     CDS             complement(<1..759)
                     /locus_tag="OQQ26_004454"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019727244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCS1859649.1"
                     /translation="MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDV
                     GPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLND
                     IQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSAL
                     RRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGAT
                     VGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDL"
     gene            complement(753..1100)
                     /locus_tag="OQQ26_004455"
     CDS             complement(753..1100)
                     /locus_tag="OQQ26_004455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacE delta 1"
                     /protein_id="HCS1859650.1"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
     gene            complement(1330..1803)
                     /locus_tag="OQQ26_004456"
     CDS             complement(1330..1803)
                     /locus_tag="OQQ26_004456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001389366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA7"
                     /protein_id="HCS1859651.1"
                     /translation="MKISLISATSENGVIGNGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFDSMGVLPNRKYAVVSRKGISSSNENVLVFPSIEIALQELSKITDHLYVSGGGQI
                     YNSLIEKADIIHLSTVHVEVEGDINFPKIPENFNLVFEQFFLSNINYTYQIWKKG"
     gene            1961..>2250
                     /gene="intI1"
                     /locus_tag="OQQ26_004457"
     CDS             1961..>2250
                     /gene="intI1"
                     /locus_tag="OQQ26_004457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 integron integrase IntI1"
                     /protein_id="HCS1859652.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCT"
BASE COUNT          580 a          587 c          565 g          518 t
ORIGIN      
        1 cagatctcca ggcgcgtggg tgcggacgta gtcagcgcca ttgccgatcg cgtgaagttc
       61 cgccgcaagg ctcgctggac ccagatcctt tacaggaagg ccaacggtgg cgcccaagaa
      121 ggatttccgc gacaccgaga ccaatagcgg aagccccaac gccgacttca gcttttgaag
      181 gttcgacagc acgtgcagcg atgtttccgg tgcggggctc aagaaaaatc ccatccccgg
      241 atcgaggatg agccggtcgg cagcgacccc gctccgtcgc aaggcggaaa cccgcgcctc
      301 gaagaaccgc acaatctcgt cgagcgcgtc ttcgggtcga aggtgaccgg tgcgggtggc
      361 gatgccatcc cgctgcgctg agtgcataac caccagcctg cagtccgcct cagcaatatc
      421 gggatagagc gcagggtcag gaaatccttg gatatcgttc aggtagccca cgccgcgctt
      481 gagcgcatag cgctgggttt ccggttggaa gctgtcgatt gaaacacggt gcatctgatc
      541 ggacagggcg tctaagagcg gcgcaatacg tctgatctca tcggccggcg atacaggcct
      601 cgcgtccgga tggctggcgg ccggtccgac atccacgacg tctgatccga ctcgcagcat
      661 ttcgatcgcc gcggtgacag cgccggcggg gtctagccgc cggctctcat cgaagaagga
      721 gtcctcggtg agattcagaa tgccgaacac cgtcaccatg gcgtcggcct ccgcagcgac
      781 ttccacgatg gggatcgggc gagcaaaaag gcagcaatta tgagccccat acctacaaag
      841 ccccacgcat caagcttttg cccatgaagc aaccaggcaa tggctgtaat tatgacgacg
      901 ccgagtcccg accagactgc ataagcaaca ccgacaggga tggatttcag aaccagagaa
      961 agaaaataaa atgcgatgcc ataaccgatt atgacaacgg cggaaggggc aagcttagta
     1021 aagccctcgc tagattttaa tgcggatgtt gcgattactt cgccaactat tgcgataaca
     1081 agaaaaagcc agcctttcat gatatatctc ccaatttgtg tagggcttat tatgcacgct
     1141 taaaaataat aaaagcagac ttgacctgat agtttggctg tgagcaatta tgtgcttagt
     1201 gcatctaacg ccgagttcag cggcagtttt taagttgtgg ttttatggaa tacttttgcg
     1261 cagcaaaacc ataaaaccgc gacttaaaaa ctgtccaagg agcgcagcga ctggtgctgg
     1321 aacgacttgt tagccttttt tccaaatctg atatgtgtaa tttatattag acaaaaaaaa
     1381 ctgctcaaaa accaaattga aattctctgg aattttagga aaattgatat caccttcaac
     1441 ctcaacgtga acagtagaca aatgaattat atctgctttt tcaataagac tattgtagat
     1501 ttgaccgcca ccagagacat ataaatgatc tgtaattttc gatagttctt gcaaagcgat
     1561 ttctattgaa ggaaagacta atacattttc atttgagctt gaaattcctt tcctcgacac
     1621 tactgcatat tttcgatttg gaagaacacc catagagtca aatgttttcc ttccaacaag
     1681 gagccactga ttatatgtga gcgctttaaa gagtaactgc tcaccttttg ctgaccatgg
     1741 gatatcaggg ccattaccga ttacgccatt ttctgacgtt gcagaaatca atgaaatttt
     1801 caattcaacc cccgtaatgg ctaactttgt tttagggcga ctgccctgct gcgtaacatc
     1861 gttgctgctc cataacatca aacatcgacc cacggcgtaa cgcgcttgct gcttggatgc
     1921 ccgaggcata gactgtacaa aaaaacagtc ataacaagcc atgaaaaccg ccactgcgcc
     1981 gttaccaccg ctgcgttcgg tcaaggttct ggaccagttg cgtgagcgca tacgctactt
     2041 gcattacagc ttacgaaccg aacaggctta tgtccactgg gttcgtgcct tcatccgttt
     2101 ccacggtgtg cgtcacccgg caaccttggg cagcagcgaa gtcgaggcat ttctgtcctg
     2161 gctggcgaac gagcgcaagg tttcggtctc cacgcatcgt caggcattgg cggccttgct
     2221 gttcttctac ggcaaggtgc tgtgcacgga
//
LOCUS       DAJVTL010000283         2186 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.288, whole genome shotgun sequence.
ACCESSION   DAJVTL010000283 DAJVTL010000000
VERSION     DAJVTL010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.288"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(220..384)
                     /locus_tag="OQQ26_004458"
     CDS             complement(220..384)
                     /locus_tag="OQQ26_004458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859653.1"
                     /translation="MTLTTTALNGSSSRRFEGGVWTPPLISHTALHPTSRHWMHSWHT
                     YAGNAEIPGL"
     gene            1286..1570
                     /locus_tag="OQQ26_004459"
     CDS             1286..1570
                     /locus_tag="OQQ26_004459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858243.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCS1859654.1"
                     /translation="MIYGGFMKSGVQLNLRARESQRILIDAAAEILHKSRTDFILEMA
                     CKAAEDVILDRRVFNFNDRQYEEFIEMLDAPVADDPAIEKLLARKPQWDV"
     gene            1558..2043
                     /locus_tag="OQQ26_004460"
     CDS             1558..2043
                     /locus_tag="OQQ26_004460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1859655.1"
                     /translation="MGCVTAPEPLSSFHQVAEFVSGEAVLDDWLKQKGLKNQAIGATR
                     TFVVCRKGTQQIVGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDVSFRGKG
                     LGADLLHDAVRRCYRVAENIGVRAIMVHALTENAKQFYIHHGFKPSKTQVQTLFLKLP
                     Q"
BASE COUNT          561 a          463 c          622 g          540 t
ORIGIN      
        1 tcaaaatgat ggacattatt tttgtggaac cggaggtaac agaccagacg gtttaaatga
       61 gccggttact ttaaacgggt gatggacagc acctcaaaag ttcagatgga ttatacttgt
      121 ctgcaatacc ccgggtattt tcgatttgcg aaatggatgg aacgacttgc tcaggggata
      181 gctgatggag ttactgaagt accgaaggac cactaaaaat cacaggccgg gaatttcggc
      241 gtttccggcg taggtgtgcc acgaatgcat ccagtggcgt gatgttggat gcaatgctgt
      301 atgagagatg aggggcggcg tccagacgcc gccttcaaac cgccttgagc tgctgccgtt
      361 aagagcggtg gtggtgagcg tcaaggttaa aaggcgcaga acatgtgtca ggtaggtgtt
      421 gcggagatga acgaaggtga actgtcgatg aagtgtcgaa aggaacctct aggcgatgtc
      481 gaaaatgtgc tatctacgca gcgcatgacg agtccagcag atatctggta ctggctgggc
      541 ggcatccggc atataggcag catgaacgca acacaggctc tcgtacggaa cgtgagaacc
      601 tgtcgtctcg atgctaaggg agcggcgcgg agcagaggca ctgcaagcgc ctgagtaccg
      661 atgcgagaca caggggcaga tggcttcgta gtagtgagga agtgcctgta atgggcatgg
      721 agcgaagggg gtcagtcgtt ggggctggtt tatcggtcaa ccggatagcc gggaggagcc
      781 catgagtcag ccaaagccgt tcgaggtctc taagtatgcg gtttggaaag cataccagcg
      841 ggtcaaagct aatcgaggtg cggcaggtgt cgatgggcag tcagtcgagg cgtttgaggt
      901 taccaatcga agctataccc ggtaatggcg caggttgacc tgcacttggc caagtggatt
      961 gcccgcaaac acaagcgagc gcgaggtagt ctggtgcgtg cattcgagtg gttactgcga
     1021 attcgtcacg actgcccgac gctgtttgca cactggtgct tagcttacga tacttgaatg
     1081 gttcaacgac aagagccgta tgacgcgaga gtgtcacgta cggttccgtg ggagcgtagg
     1141 ggggcggtgc ccctgcgcca cccgatatcc cctttgagtg cggttacgtc cacagaggta
     1201 aatgccgctg acgcggcatc tgtaatctgt tactttgtgt atatcatttg ctatatattg
     1261 tcaatatgct attgttgtaa agcaaatgat atacggaggc tttatgaaat caggtgttca
     1321 gctcaatctc agagcaagag aatcacagcg gatactcatt gatgctgctg cagaaattct
     1381 tcataagtcg cgtacagatt tcattctgga aatggcctgt aaagctgctg aagatgttat
     1441 tctcgaccgg cgggtgttta attttaatga caggcaatat gaagagttca ttgaaatgct
     1501 tgatgctccg gttgcagatg atcctgccat cgaaaaattg ctggcaagga aacctcaatg
     1561 ggatgtgtaa ctgcaccaga acctttatcc tcatttcatc aggtcgctga atttgtcagc
     1621 ggtgaagctg tacttgatga ctggttaaag cagaaggggc taaaaaatca ggcaatcgga
     1681 gccacccgga cttttgttgt atgcagaaaa ggtacgcaac aaatagtcgg tttttactca
     1741 ctggccactg gtagtgtcaa tcatacagaa gctacaggta accttcggcg caatatgcca
     1801 gaccccattc ctgtaattat acttgcacgc ctggctgtag atgtgtcatt tcgaggaaaa
     1861 gggcttggcg cggatttact tcatgatgca gttcgtcgtt gttacagggt tgccgaaaat
     1921 atcggtgtgc gtgcaattat ggttcatgcg cttacggaaa acgcaaaaca gttttatatt
     1981 catcatggtt ttaagccatc aaaaactcag gtgcaaacat tgtttcttaa actccctcaa
     2041 tagggagtaa tgccgatcag ttaaggatca gttgaccgat ccagtggctg tgtaagaatc
     2101 cggaaacgct cactcgtttc cggatttttc tgtgcacagt aaaagaccac ctcctgagga
     2161 ggtggctttt cagaatgccc cctata
//
LOCUS       DAJVTL010000284         2143 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.289, whole genome shotgun sequence.
ACCESSION   DAJVTL010000284 DAJVTL010000000
VERSION     DAJVTL010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.289"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..211
                     /locus_tag="OQQ26_004461"
     CDS             <1..211
                     /locus_tag="OQQ26_004461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1859656.1"
                     /translation="PVALTDTPEPTRPVTNPFWRNKHDERPEGAPGNVPRCELHLKSG
                     VVKLFDPLTPELLRALIREMKGGIR"
     gene            208..555
                     /gene="tnpB"
                     /locus_tag="OQQ26_004462"
     CDS             208..555
                     /gene="tnpB"
                     /locus_tag="OQQ26_004462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HCS1859657.1"
                     /translation="MITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDDPFSGHIF
                     VFRGRSGKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGIAW
                     QHPKRTERPGIRI"
     gene            575..2132
                     /locus_tag="OQQ26_004463"
                     /pseudo
     CDS             575..2132
                     /locus_tag="OQQ26_004463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
BASE COUNT          571 a          532 c          614 g          426 t
ORIGIN      
        1 cccggtggca ctgactgata cgccggagcc gaccagacca gttacaaatc ccttctggcg
       61 taacaagcat gatgagcgcc ctgagggggc tcccggaaac gtcccacggt gcgagctgca
      121 tcttaaatca ggtgtggtaa aactgtttga ccctctcact ccggaactgt tacgggcgct
      181 aatccgcgaa atgaaagggg gtatccgatg ataacgctgc cgaccggtac cagaatctgg
      241 atcatcgctg gcatcacaga tatgcgttgt ggcttcaatg gcctggcttc gaaggtgcag
      301 aacacgctga aagatgaccc gttctccggg catatcttcg tcttccgggg ccgcagtggc
      361 aaaatggtga aaatactgtg ggccgatcgt gacgggttat gcctgttcgc caaacgcctg
      421 gaacggggcc gcttcgtctg gccggtgacc cgggaaggga aagtgcacct gacgccagct
      481 cagttatcca tgctactgga ggggatcgcg tggcaacatc ccaaacggac agaacggcct
      541 ggcatccgga tataacccgt gataaaacaa gggaatgaac aatgaactcc ccgatgatat
      601 tgagctgctt aaagccatgt tgcgtaagca acagagtcgg cttcgacagt atgcctgtca
      661 ggtcgcgggc tatgagcagg aaattgaacg gctgaaagcg caactcgaca ggttgcgtcg
      721 tatgttgttc ggccagagtt cagagaaaaa gcgtcataag cttgaaaatc agatccgaca
      781 ggcagaaaaa cgactgtcgg aactggaaaa ccggctgaac acagccagaa atcttctgga
      841 agatgcatcg tcagtcacag attcacctga caccagtccc ccgtcagaaa acccgatcgc
      901 cagtaagcct gaatccccgg gagacacatc gccttctgcc tgctgaaacc agttgcccgg
      961 cctgtggagg tgttctgaaa gaaatggggg aaacaatctc agagcaactg gatatcatta
     1021 ataccgcctt taaagttatc gaaaccatac gtcccaaact ggcctgtagc cggtgtgatg
     1081 tcatcgttca ggcaccactt ccccctaaac cgatcgaacg cggttatgcc agtgcagggt
     1141 tacttgcacg gatcctggtc agcaaatata tggaacatat ccctttatat cgccagtcag
     1201 aaatatacgc gcgacagggc gtggagctga gccgtaatac catggtgcgc tgggtatcag
     1261 aaatggcaga caaactccgt cctctgtata tagcgctgaa tgactatgtt ctggaggcag
     1321 gaaaggtgca cgcagatgac actccggtga aagtactggc cccggggaac ggaaagacga
     1381 aaacgggtcg tctgtgggta tacgtcaggg atgatcgtaa tgcgggttca tccctgccgg
     1441 cagccgtctg gttcgcgtat tcggcagatc gcaaaggaga acatccgcag ctccacctgg
     1501 caaagtatca gggcgtactg caggctgatg cctatgcagg ttataacgta ctgtacgaaa
     1561 cgggccgggt gaaggaagcc gggtgcctgg cccacgcccg ccgaaaaatc catgacgagg
     1621 atgtgcgccg tccgacagaa atgactcagg aagcgctcag acggatagca gagttatacg
     1681 acatagaagc ggagatacgt ggcagtccgg cagaggaacg gcttgcagtc agaaaagcca
     1741 gaagcgtcca gttgatgcag tcgttgtacg actggataca gttgcagagg aaaacgctgt
     1801 cgaaacatgc ggagatggcg aaggcgttcg actatatcct gaatcactgg aatgcgctga
     1861 acgagttctg tcgtgacggc tgggtggaaa tagacaacaa catcggtgaa aacgcgttac
     1921 gatcggtggc ggttggaaga aaaaattatc tctttttcgg ctcagacaag ggaggagaaa
     1981 gtgcggcgat catctacagt ctgctggtca cctgcaaaca gaacgaagtg gagccggagg
     2041 actggttgcg cgaagtgatc gagaagctca atgactggcc gtcgaaccaa gtgcatgaac
     2101 tgctgccctg gaacttctcg tctgtaaaat aatccttacg cta
//
LOCUS       DAJVTL010000285         2109 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.290, whole genome shotgun sequence.
ACCESSION   DAJVTL010000285 DAJVTL010000000
VERSION     DAJVTL010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.290"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..211)
                     /locus_tag="OQQ26_004464"
                     /pseudo
     CDS             complement(1..211)
                     /locus_tag="OQQ26_004464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611998.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            486..790
                     /locus_tag="OQQ26_004465"
                     /pseudo
     CDS             486..790
                     /locus_tag="OQQ26_004465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004952983.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S-type pyocin domain-containing protein"
     gene            959..>2109
                     /locus_tag="OQQ26_004466"
     CDS             959..>2109
                     /locus_tag="OQQ26_004466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005014646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HCS1859658.1"
                     /translation="MSLFTEPKEIERLPSEEIERLYPVLRYRVFISIFLGYMGYYFVR
                     NTTSVLSGVLHMSATEIGIISCAGFLSYGISKFVSGLISDRSKSKVFLSLGLFLSGLV
                     NFLIGYIPGIITSVTLFSTMYLLNGWIQGMGYPPGAKTLVFWYEHRERITWATLWNLS
                     HNVGGALAPVLIGFSFGFFGDSALDHARAAFIFPGVLCMAMSVLIYFIQVDRPVSVGL
                     PPIEEWKGNVVSHPAKGREQGPRLSIPDIIRKHIIRNNKLIYCCIYGSFVYILRYGIV
                     SWAPKFLSDSLDVGGKNMGKLASMGGGSVFEIGGVAGMLLAGYLSVRLFRNSKPLTNT
                     LFLALTIILLIAYWYVPSGNEYLWLNYTILILLGLAVYGPVMFIGLYSM"
BASE COUNT          548 a          432 c          483 g          646 t
ORIGIN      
        1 aacctcgatc ggtgtggtgg attagcccgg caggtgggcg ctggctcctg agcgccataa
       61 acagggcttt acccgtcaac tctttcgtta tgcgctctcc catggcgtaa ccgacaattt
      121 cgcacgtata aacatctttg acgccagcga gatacagcca tccttcccgg gtggcaacat
      181 acgttatatc tgcgacccag acctgattag gggggttggg gagcaatgga acagtaaacg
      241 ccgttaagaa gtcaatttaa atagccaaaa attaactagc caatttacat tgcaggttgt
      301 aatttttaac cacctttttt acgatagcca aattacctat acccatcccg gccctgccaa
      361 gccatacccg ctatcggcga tgaaaatgct tttgtgcgcg gtcggagtgg tcccgacgag
      421 ggttttaccc gaagtcgggg cgtatctccg cgttagcggg ccgtgagggc cgcttacgag
      481 cgtgtatgag agacgtacag tggttttgtc cgctcacacc agtacataca ggtacggaaa
      541 taaaaccagt cgaaatgccg gtaacgacga ttactcctgt ctctgatgcc ggtggactac
      601 aagattttat ttactggcgt cctgatgcgg acaggactgg tatggaacct gtttatgtga
      661 tacttaatga tcctctggat tccgggcgat ttacgcgtaa acaactaaat aaaaatatct
      721 taaacatgca agtaattttg gtattctcga tacaagaata aatagtagta actactatag
      781 ttgcaaataa tgttaaaaac atttctgtga tcatctttac atttttcatg attgacaatt
      841 gtttttggtt aaaaaaagac aactaatgag tgtgataatg caatactttt agtgattata
      901 taatgataag taaacaggtt tgcgacaatt ggttatcagt attacagaag gattaaatat
      961 gtcattattc acagaaccta aggaaattga aagattaccc tctgaagaga ttgaacgatt
     1021 atatcccgtc ctgcgataca gggtctttat cagcattttc ctcggatata tggggtatta
     1081 ttttgtccga aacaccacca gtgtgttatc cggtgtgctg cacatgtctg caaccgagat
     1141 cggcattatc tcctgtgccg gttttttatc ctatggtata tcaaagtttg tttccggact
     1201 tatttctgac agaagtaagt caaaagtatt tttgtctctt ggtttattcc tgtccggact
     1261 ggtaaatttt ctgataggat atattcccgg gatcatcaca tccgttacgt tattttcaac
     1321 aatgtattta cttaacggct ggatccaagg tatgggatat cctcctggtg ccaaaacact
     1381 ggtgttctgg tatgaacatc gggaaaggat cacctgggcc acactgtgga atttatcgca
     1441 caatgtcggg ggagctctgg cccccgttct gattggtttc agttttggtt ttttcggcga
     1501 cagtgctctg gatcatgccc gggccgcatt tatcttccca ggagtactgt gtatggcaat
     1561 gagtgtgctg atttacttta ttcaggtgga cagacctgta tcagtgggtc ttcctcccat
     1621 tgaagaatgg aaaggtaacg tcgtttcaca cccggctaaa ggccgtgaac aaggtccgag
     1681 actctccatt cctgatatca tcagaaaaca tatcatccga aataataaac tcatttactg
     1741 ctgtatctat ggttcgtttg tttatattct gagatacggt attgtttcct gggctcctaa
     1801 gtttttaagt gacagtctgg atgtcggtgg taagaatatg ggaaaactgg catcaatggg
     1861 gggggggtct gtttttgaaa tcggtggtgt ggctggtatg cttcttgccg gatacctgtc
     1921 tgtcagactg ttcagaaact caaaaccatt aacaaatact ttatttctgg cacttaccat
     1981 tattttatta atcgcgtact ggtacgtgcc atcaggcaat gaatatctct ggctaaacta
     2041 tacaatcctt attctgttgg ggctggcagt gtatggtccg gtgatgttta ttggtcttta
     2101 ttcaatgga
//
LOCUS       DAJVTL010000286         2108 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.291, whole genome shotgun sequence.
ACCESSION   DAJVTL010000286 DAJVTL010000000
VERSION     DAJVTL010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.291"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1036)
                     /gene="torC"
                     /locus_tag="OQQ26_004467"
     CDS             complement(<1..1036)
                     /gene="torC"
                     /locus_tag="OQQ26_004467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HCS1859659.1"
                     /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST
                     TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ
                     TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHARQHPEAARQM
                     KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK
                     GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD
                     VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG
                     APEISHFDANG"
     gene            1166..1858
                     /gene="torR"
                     /locus_tag="OQQ26_004468"
     CDS             1166..1858
                     /gene="torR"
                     /locus_tag="OQQ26_004468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
                     /protein_id="HCS1859660.1"
                     /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN
                     QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
                     PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
                     AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
                     HGEGYFLAADVC"
     gene            complement(1831..>2108)
                     /locus_tag="OQQ26_004469"
     CDS             complement(1831..>2108)
                     /locus_tag="OQQ26_004469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309176.1"
                     /note="periplasmic sensory protein associated with the
                     TorRS two-component regulatory system; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HCS1859661.1"
                     /translation="VVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLLG
                     QSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK"
BASE COUNT          491 a          547 c          548 g          522 t
ORIGIN      
        1 aaccgttagc gtcaaagtgg gatatttccg gtgcgccatg gcactggtta caggtgccgt
       61 tgtacaacga atccgcatag gcccagatcg gtttgatatc gttcaccatg tcacctttct
      121 tcatccacgc ggtggcctgc aacttgctcc actcggtatt ggtgtcggca acggtggttt
      181 tctccagcgt tttcacctgc tgctgcacat caccacgaat cgaggcaaca aagatgcgtt
      241 tacctgggaa ctgggtgagt acacgctgac gtccggcgct ttccgtccag ccggtaattt
      301 caatttgcag ccagtcgccg tcacgtttaa ggactttcac ttccgaagca ggcagcagag
      361 aaccagaggc ttctttatcg cctttcgccg cataaattgg cttaatatca atagagtaca
      421 gcgtgtcacc actgtcatta gcactggcgc gcagctcatc gaactgctta cggaagccgc
      481 tactcatatc cggtaactgg tgggcaatac ctttatgaca gtcgatgcag gattgattat
      541 ctttcgctgc caccttcatc tgacgtgccg cttcaggatg ctgcctggca tgatccatcg
      601 catcgtagtt atggcaggag cgacaggttg ccgagttgtt ttctttcatt cgcgcccatt
      661 cacgctcggc aagttccgcg cgtttggctt cgaatttttc aggtgtatca atggagtggg
      721 caataaaggt ctggtaaatg tcgttgctcg cttccagttt gcgcttcacc atgcctggaa
      781 tatccggggg gatatgacag tcatggcatt cagctcgcac gccggaggcg ttctggaaat
      841 gcaccgactg tttatattct tcatacaccg gttgcatact gtggcaactg acacaaaatt
      901 cggttgtgct ggtgactttg atcccaacgt gtggcaatac aatcagcgca atgccaatca
      961 caatcccaat agcgaccagc gccagtaccg accaacgagc actgggtcgg cgtagcgcgt
     1021 tccagagttt ccgcataata gcccctgtaa aattatggtt tagcgaagcg atcttaatga
     1081 gcaaatatga acagcggcac tggtcaggat gaacggctta cagcagaata tgaacagata
     1141 tgaacagaat gagtaaaacc ctctgatgcc acatcacatt gttattgttg aagatgagcc
     1201 ggttacccag gcgcgattac aatcctactt cactcaggag gggtatactg tttccgttac
     1261 ggcgagcggt gccgggctac gggaaattat gcagaatcag ccggtggatt tgattctgct
     1321 ggatatcaac ttgcccgatg aaaatggcct gatgttaacc cgcgccctgc gagaacgctc
     1381 aacggtgggg attattctgg ttaccggacg cagcgatcgg attgaccgta ttgttgggct
     1441 ggaaatgggc gcagacgatt acgtcaccaa accgctggaa ctgcgcgaac tggtagtacg
     1501 ggtgaaaaat ctgctctggc gaatcgacct cgcgcgacaa gctcaaccgc acactcagga
     1561 caactgctat cgctttgccg gttattgcct gaatgtgtcg cgccatacgc tggagcggga
     1621 tggcgagccg attaaactga cccgcgcaga gtatgaaatg ttggtggcat ttgtgacgaa
     1681 tccgggcgaa attctcagcc gtgaacgtct gctacgtatg ctttctgcgc gtcgggtgga
     1741 aaaccctgac ctgcgcaccg tcgatgtgtt aattcgtcgt ttacgtcata aactcagcgc
     1801 ggatttactg gtgacgcaac atggtgaagg ttatttctta gccgctgatg tgtgctgata
     1861 aaaatagacc ggacgaaatc cccccggtga cagcgagcgg cggatatgtt ctcggtcggc
     1921 atttttcggc gtcagaacta aaatcggtgg gctgacatta tcagacaccg attgccccag
     1981 taattgcctg atggcctgct caaccgccag ttccccctgc cagaccattt gatcgctggc
     2041 agccataatc actcttcccc gcttcagccc gcgatacacc tgatgtgaaa gataaaacga
     2101 caccacgg
//
LOCUS       DAJVTL010000287         2033 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.292, whole genome shotgun sequence.
ACCESSION   DAJVTL010000287 DAJVTL010000000
VERSION     DAJVTL010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.292"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            119..1192
                     /locus_tag="OQQ26_004470"
     CDS             119..1192
                     /locus_tag="OQQ26_004470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HCS1859662.1"
                     /translation="MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFDLYLGTSAGAQNLSAYICNQPGYARKVIMRYTTKREFFDPLRFVRGGN
                     LIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
                     RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQ
                     WFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIAL
                     GSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVAND
                     TLVAEVSDAPQANDPTFNNEDLA"
     gene            1189..1971
                     /locus_tag="OQQ26_004471"
     CDS             1189..1971
                     /locus_tag="OQQ26_004471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HCS1859663.1"
                     /translation="MICRFIDTHCHFDFPPFIGDEEASLQRAAQAGVGKIIVPATEAE
                     NFARVQALAENYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEVGLDL
                     FGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFS
                     GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQG
                     QPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYAVFSVSG"
BASE COUNT          459 a          516 c          579 g          479 t
ORIGIN      
        1 tcagaccatt aagaaaattt tatccaaagc cagtccagcg gactggcttt tgcggtttta
       61 gcgaataata aattgcgtta ctttgtcatt ctttcacaac aaaaacagga aggcagaggt
      121 ggggcagcga atacctgtaa cgcttggtaa tattgcgccg ttgtcgctaa ggccgttcca
      181 gcctggacga atagctctgg tgtgcgaagg cggcgggcag cgtggaattt tcacggctgg
      241 cgtgctggat gagtttatgc gcgcgcagtt taatcctttc gatctttatc tcggcacatc
      301 tgccggggcg cagaacctct cggcgtatat ctgcaatcag cccggttacg cgcgcaaagt
      361 catcatgcgc tataccacaa aacgcgaatt tttcgatcca ttgcgctttg tccgtggagg
      421 aaatcttatc gatctcgact ggctggtgga ggccaccgca agccagatgc cgttgcaaat
      481 ggataccgcc gcgcggttgt ttgacagcgg caaatcgttt tatatgtgcg cctgtcgtca
      541 ggacgactat gcgccgaatt actttttacc gaccaaacaa aactggctgg atgtgattcg
      601 cgcctccagt gcgatacctg gcttttatcg tagcggagtg tcgctggaag gcattaacta
      661 cctggatggc gggatcagtg atgcgattcc ggttaaagag gcggcaaggc agggcgctaa
      721 aacgttagtc gtcatccgca ctgtgccgtc acaaatgtac tacacgccgc agtggttcaa
      781 acgcatggaa cgctggctgg gtgacagtag cctgcagccg ctggtcaatc tggtgcagca
      841 tcatgaaacc agctatcgtg acattcagca atttattgag aaaccaccgg gcaagctgcg
      901 gatattcgaa atttatccgc cgaagccatt gcatagtatc gcgcttggca gtcggattcc
      961 ggcgctgcgt gaagactata aacttgggcg tttatgcggt cgttatttcc tcgccacggt
     1021 tggcaagcta ttaactgaaa aagcgccgct tacccgccat ctggtgccag tggtgacgcc
     1081 ggaatcgatt gtcattccgc ctgcgccagt cgccaacgat acgctggttg ccgaagtgag
     1141 cgacgctccg caggcgaacg acccgacatt taacaatgag gatctggctt gatttgccgt
     1201 tttatcgaca cccactgcca ttttgatttc ccgcctttta ttggcgatga agaggccagc
     1261 ctgcaacgcg cggcacaagc gggcgtaggc aagatcattg ttccggcgac agaggcggaa
     1321 aattttgctc gcgtgcaggc gttagcggaa aattatcaac cgctgtatgc cgcattgggc
     1381 ttgcatcctg gtatgttgga aaaacatagc gatgtgtctc ttgagcagct acagcaggcg
     1441 ctggaaaggc gtccggcgaa ggtggtggca gtgggggagg tcggtctgga tctcttcggc
     1501 gacgatccgc aatttgagag gcagcagtgg ttactcgacg aacaactgaa acttgcgaaa
     1561 cgctacgatc tgccggtgat cctgcattca cggcgcacac acgacaaact ggcgatgcat
     1621 cttaaacgcc acgatttatc gcgcactggc gtggttcacg gtttttccgg cagcctgcaa
     1681 caggcagagc ggtttgtaca gctgggctac aaaatcggcg taggcggtac tatcacctat
     1741 ccacgcgcca gtaaaacccg cgatgtcatc gcaaaattac cgctggcatc gttgttgctg
     1801 gaaaccgacg cgccggatat gccgctcaac ggctttcagg ggcagcctaa ccgcccggaa
     1861 caggctgtgc gggtgtttga cgtgctttgc gagttgcgcc cggaaccaga agatgagatt
     1921 gccgaagtgt tgcttaataa tacgtatgcg gtgtttagcg ttagtgggta gtttgccctt
     1981 cgtaggcagc atccggcagt cggcgcataa tgcctgatgc gacgcttaac gcg
//
LOCUS       DAJVTL010000288         2010 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.293, whole genome shotgun sequence.
ACCESSION   DAJVTL010000288 DAJVTL010000000
VERSION     DAJVTL010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.293"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..>2010)
                     /gene="evgS"
                     /locus_tag="OQQ26_004472"
     CDS             complement(<1..>2010)
                     /gene="evgS"
                     /locus_tag="OQQ26_004472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HCS1859664.1"
                     /translation="ATQLNLRYMIDHYYPNELYHFLIPGVQNASLSFAFLRGEPELKD
                     IINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGF
                     YLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADY
                     YKNAMLPLENSESPFKDVFSNTHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLC
                     NLPASDHAVYICGWQDITETRDLIHALEVERNKAINATVAKSQFLATMSHEIRTPISS
                     IMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVD
                     IPTLVQNTCHSFGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTT
                     EGAVKITTSMVHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLG
                     LMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSI
                     LIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFE
                     LTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHLVA
                     HIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFQA"
BASE COUNT          542 a          404 c          435 g          629 t
ORIGIN      
        1 tgcttgaaac gcagcgggta gatctttatg cgtttcatgc tggaaagtca tgagaatctc
       61 ctgcatcagt tgtagatcgt tcgccgtatt atttttcagg gcttcgatat caaggtggcg
      121 atactgaggt gcaatatgcg caaccaggtg taactgactt aaatgtgttt tcagtacatc
      181 cagggtcaac ggtttgaaca aacataagtt catgccgcaa cttaaccctt tttcacgttc
      241 gttagcctgt gcgttggctg taagccccca gatgggtaag gaagaatttt gctcacggag
      301 tttgcgagtc aactcaaaac catccatatt cggcatatta acgtcagtaa taagcagatc
      361 ataatgttgc atactgactt tgtgtagcgc ttgcacacca tcagtggctt catcaacatc
      421 atatcctaat agatttagct ggcgtttgag taatagcctg ttggtcggat gatcatccgc
      481 gattaatatg ctcaactttt caggtagtgt gatgggttgt tctgcttttg cctcgacagt
      541 cgccacttgc tggctaattt ctaccgggat tgtgatcgta aatgttgttc ctatgcctgg
      601 atgactttct aatgacaaat cgccctgcat atttttaatt aattctttgc agatcattaa
      661 gcctaagcca gatcctgttt gctggcgacc agcacttgtt tggctgtagc gtttaaacag
      721 ttgttgttgt tcttcctgcg ataatccact tccagaatcc ataatcgtca ttttgataac
      781 agcgtggttg tcatcaatgt gaaccatgga ggtcgtaatt tttactgccc cctcggtggt
      841 aaatttgaga gcattgctca gtaaatttga taagacctgc ttaaacgcct gagggtcgat
      901 cttaactagg taatgatcag gaaatgtact gctgcaactt aatgcgatcg atttgcttgc
      961 agcaatcgca ccgaaagagt gacaagtgtt ctggactaaa gtagggatat cgacccattg
     1021 tggttgaagt tgatagttac ccgattcaat tttgtcgaca tcaaggattt caccaattaa
     1081 gccgaggagt gattgtccgg tggcgtaggc aagtgaaatc gcctccaccc gttgctcctt
     1141 gctaagacca gaacccgaca gaagttccag gaagcccata atggagctta ttggtgttct
     1201 tatttcgtga ctcattgttg ccagaaactg gctttttgcg acagttgcat tgatcgcttt
     1261 atttctctct acttcgagtg catgaattaa atcacgcgtc tcggtaatat cttgccaacc
     1321 acaaatataa acagcatgat cgctggctgg cagattacat aatgtatgcc agtgattaat
     1381 gcatcttttc tcgatgccat tatcaatttc aaatacctgt gtgtatattg ttcggttttc
     1441 tttcgtttct gctgtgactt catgtgtatt agaaaaaaca tctttaaagg gggattcact
     1501 gttttctaat ggtaacattg catttttata gtaatcagca gtgaaataat gttcaaatgc
     1561 actattgtga ctaatgacat taccttgcca gtttacaaca taagttggat tcggtaagga
     1621 atccgagagc gctttccgga atgatatttg gttttctaaa tcaccctgaa taactttacg
     1681 acgacgaact gagcgtaaca ggtagaatcc ccataaaagg ctactgccaa ctaataaaac
     1741 ggataatgtc gtaacaatat aaaattgctc gctatagagg tcccatgtgt caatggtcac
     1801 attgggcatt ttaatccatt tttcggtcag gcgcagaact tcgcttgggg gaattgcatt
     1861 cagtgcttta ttaataatat ccttaagttc cggttctccg cgaagaaaag caaacgaaag
     1921 tgatgcattc tgaacgccgg gaataagaaa atgataaagt tcattaggat agtaatggtc
     1981 gatcatgtaa cgcaaattta actgtgtcgc
//
LOCUS       DAJVTL010000289         1989 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.294, whole genome shotgun sequence.
ACCESSION   DAJVTL010000289 DAJVTL010000000
VERSION     DAJVTL010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.294"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(850..1521)
                     /gene="queE"
                     /locus_tag="OQQ26_004473"
     CDS             complement(850..1521)
                     /gene="queE"
                     /locus_tag="OQQ26_004473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HCS1859665.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
                     PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKH
                     PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
     gene            1660..1800
                     /locus_tag="OQQ26_004474"
     CDS             1660..1800
                     /locus_tag="OQQ26_004474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859666.1"
                     /translation="MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFI
                     QI"
     gene            1814..1924
                     /locus_tag="OQQ26_004475"
                     /pseudo
     CDS             1814..1924
                     /locus_tag="OQQ26_004475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417258.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
BASE COUNT          638 a          399 c          366 g          586 t
ORIGIN      
        1 gtttatccct gtttttacaa ggaatattaa ctacactcga tgtctttaga ataaaagaca
       61 atacgaatcg tactttatca atttacactt aaagtatgaa ctggatatct ttattcataa
      121 gaactattca tcaacagcgt atagaggcgg ttatgtaaaa ccactcatta gcctcaaaac
      181 aaagacaaat ttccagattt attacttaat caatgaataa caagcttaaa aaatacactg
      241 ttattctaaa gaaaaaatta acaggcatta attaatatta aaaaaataat atattaaagt
      301 ttcttaacgg tttaagggtt atacaaataa cactttgatt aaatttgatt tttttgtatc
      361 gataattgtg aacttatctg gcatggggaa ctattttgaa catgaggtgt tacgtggata
      421 tgttgcttat tacaagtaca gctaatataa aaacttgaga aagagataac gggttatatg
      481 gtggtttatc cccgctggcg cggggaacac tctaaacata acctattatt aattaatgat
      541 tttttaagcc agtcacaatc taccaacttt acaggatcac acaaacaaca catccattat
      601 gttaaagagc acttaatcca ttgattaaaa aggtaaatat ttaaaataac tcaatacaaa
      661 ctaaaatcta ccaaacttcg ccgcaataat tttcactcca gcgaaaaatt aacgccgcag
      721 actttgtaga gaatgataat gattagtccg ggatgggtaa gatggatgag ttttcagggg
      781 cgacaaataa tacaaatgag tggaattctt tacaagttcc acccatttat aacgcttata
      841 aatgtgtaat taggcaatat ttaaatattt atgtgtttgc atcgacaaac gccaattacg
      901 cgcaatacag gtttcaatgc acaatcgtgt ggcatcatcc ttttggctaa tcggctgcag
      961 tgcaatgact cgcggtttat catcggtcag cgttgccagt agttcatcca gtgcttcaat
     1021 atcgcgtacg cgccccactg gatgcttgat ttcgttggct cgctccagtg cctgtgacaa
     1081 cacttcatag ccgccgcgca tgttcagctt tggcgatacg gtaacccagg tattcggtgt
     1141 gcagcgtact tcatgagtac cactggtttc gatctggcag ctaaaaccgt tcttttcgag
     1201 cagatcagtc agtggtagca aatcatgaat gcaaggctca ccacccgtaa tcaccacatg
     1261 ccgcgcggtg tatccctggc gaccaatgac agccagcaaa tcttcactgc tcgccgcccc
     1321 ccacttatca ctctctttgg tcttcgccag aatgctgaaa agggagactt cccgatcctc
     1381 aagcttttcc caggtgtgtt tggtgtcgca ccaggcacag ccaaccgggc atccctgtaa
     1441 acgaataaaa atggcgggaa cgccggtaaa gtaaccctca ccttgcaggg tctggaacat
     1501 ctcgttaatc gggtactgca tagcattctc tgtgaagtgg ataattgtta attattgcag
     1561 atcctgccgc aacaatcatg tcttattaac attctgttac atgcagattt aaagaaaaat
     1621 gggaaacata tcgttaataa ttaaagggag taacgtatta tgtcagaaga aaataaagaa
     1681 aatggattta atcatgtcaa aacattcacc aaaattatat ttattttttc tgtattagtt
     1741 tttaatgata acgaatctaa aattaccgat gccgccgtca atttatttat ccagatttaa
     1801 tgagaaattt ataatgcgct atttcatact aatgttcact ttcgtgtgtt cgtttgttgc
     1861 agcccaacca actattgtcc cacaattaca gcaacaagtt acggatctta cgagtagctt
     1921 aaacgtaagc gccccgagaa gtacgtagcg taaggattat tttacagacg agaagttcca
     1981 gggcagcag
//
LOCUS       DAJVTL010000290         1927 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.295, whole genome shotgun sequence.
ACCESSION   DAJVTL010000290 DAJVTL010000000
VERSION     DAJVTL010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.295"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            203..472
                     /locus_tag="OQQ26_004476"
     CDS             203..472
                     /locus_tag="OQQ26_004476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859667.1"
                     /translation="MAQVNMSVRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNSWFRDQVAAGRQQLECGDVLPHDMVESSAAAWRDEMSRKIADK"
     gene            469..695
                     /locus_tag="OQQ26_004477"
                     /pseudo
     CDS             469..695
                     /locus_tag="OQQ26_004477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585073.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            724..1314
                     /gene="ospG"
                     /locus_tag="OQQ26_004478"
     CDS             724..1314
                     /gene="ospG"
                     /locus_tag="OQQ26_004478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector protein
                     kinase OspG"
                     /protein_id="HCS1859668.1"
                     /translation="MKITSTIIQTPFPFENNNSHAGIVTEPILGKLIGQGSTAEIFED
                     VNDSSALYKKYDLIGNQYNEILEMAWQESELFNAFYGDEASVVIQYGGDVYLRMLRVP
                     GTPLSDIDTADIPDNIESLYLQLICKLNELSIIHYDLNTGNMLYDKESESLFPIDFRN
                     IYAEYYAATKKDKEIIDRRLQMRTNDFYSLLNRKYL"
     gene            1653..1927
                     /locus_tag="OQQ26_004479"
                     /pseudo
     CDS             1653..1927
                     /locus_tag="OQQ26_004479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355812.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
BASE COUNT          544 a          421 c          456 g          506 t
ORIGIN      
        1 tcgcataaaa ctgtcagcgc cagtgatagg acaggtgaaa cctgtcaata cgtaccggct
       61 tacgccgggc ttcggcggtt ttactcctct gccatatgca acaacggagt gccgccttac
      121 atgccgctgg cgcggcatat cctggtgacg atatctgaac agttatatac tgtgtatata
      181 cgtggtaatg acgaggtggc aaatggcaca ggttaatatg agtgtaagaa tcgacgcaga
      241 actgaaggat gcttttatgg ccgctgcaaa aagcatggac cgtaatggct ctcagttaat
      301 ccgggatttt atgcgccaga ccgttgaacg gcagcacaat tcttggttcc gtgaccaggt
      361 tgcggcaggc cgtcagcaac tcgaatgcgg tgatgtgctt ccccatgaca tggtcgaatc
      421 ctctgctgct gcatggcggg atgaaatgag caggaagatt gctgataaat gatggagatg
      481 ttctggacca tgctggccat ccaggacagg aagcgcattc gtagtacatt gcggagcaga
      541 acctgatggc cgccattgaa ccggacgaac ggattggtta ttcagccagc agcctggcag
      601 ggcagccgta taaaggccgc aacggtcgtg tggaaggaac atctggacca cacaaggtag
      661 cgtgtaacgt tattttgtgt gaaaatctct tgtgattttt aaatatcgta acaaaggtat
      721 gacatgaaaa taacatctac cattattcaa acaccttttc catttgagaa taataattct
      781 catgctggca tagtaacgga gcccattctc ggtaagttaa taggtcaggg gtcgacagca
      841 gaaatctttg aagatgtgaa tgattcatct gctttgtata aaaagtatga tcttattggc
      901 aaccagtaca atgagattct ggaaatggct tggcaagaat ctgagctttt taatgctttt
      961 tatggcgatg aagcatccgt tgttatacag tatggcggag atgtgtacct ccgaatgctg
     1021 cgcgtgcctg ggactcccct tagtgacatt gatacagctg atatccctga taatatagag
     1081 agcctttatc tacagttgat atgtaaattg aatgagttga gtataatcca ttacgatctt
     1141 aatacaggta atatgctgta tgataaagaa agtgaaagtt tattcccaat agattttcgc
     1201 aatatttatg ctgaatatta cgctgcaacc aaaaaagata aagagattat cgaccgacga
     1261 ttacaaatgc gtacaaatga tttttattcg ttattaaaca ggaaatattt atagccgtat
     1321 ttgttgatgc tataagccag aggctcttct atgagaatat ggggaccatt ccctcgcgat
     1381 attaacgtaa tatcttaatt gtatgcaccg ccagaatgcg ttcagtgcga tcacggcagc
     1441 agacaggtaa aaatagcaac aaaccacccg aaaaaccgcc gcgatcgcgt atgataaatt
     1501 ttaaccacat gcatacctgt gcagcaaggc gaatcacgca cggatttcca gccagagaca
     1561 cctgaaacgt aaccggctca tttaaaccgt ctggtctgtt acctccggtt ccacaaaaat
     1621 aatgtccatc attttgaagt ggacactatc gtatggaata ccggacctga atcactgaag
     1681 ctttacgcct tcatttcgaa gaacatttac cacgggttgt ggccggacgt cgcctgggcg
     1741 taccaaaatc aactgtctgt ggtatgttcg tgcgcttccg caacgctggc ctttcatggc
     1801 ctctgcccgc aggtatgtcg gagcaggaac ttgatgccct tctttacgga agtgcctcca
     1861 cagtacctgt cgtacttact gaaagcaccg ttatgcccaa actcccggtg gtaaaaaaac
     1921 gtccccg
//
LOCUS       DAJVTL010000291         1876 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.296, whole genome shotgun sequence.
ACCESSION   DAJVTL010000291 DAJVTL010000000
VERSION     DAJVTL010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.296"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1407)
                     /gene="ospC2"
                     /locus_tag="OQQ26_004480"
     CDS             complement(<1..1407)
                     /gene="ospC2"
                     /locus_tag="OQQ26_004480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC2"
                     /protein_id="HCS1859669.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSS
                     SGISEKHLDHCADTVKSFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFNFRHQSNANLSNNTLNIKSFD
                     KIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQEKLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIRLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNAKSDMALYLLSK
                     FNFTKQDVAEMEKMNNNMYCELYDVEYLLSEDSANYKVLEYFINNGLVDVNKRFQKAN
                     SGDTMLDNAMKSKDSKMID"
BASE COUNT          593 a          317 c          298 g          668 t
ORIGIN      
        1 atcaatcatt tttgaatctt tgcttttcat cgcattgtca agcatagtgt ccccactatt
       61 tgctttttga aatcttttgt ttacatcaac caatccatta ttaataaaat attctagcac
      121 tttatagttg gcactatctt cactaagtaa atactcaaca tcatacagct cacaatacat
      181 attgttgttc attttctcca tctctgcgac atcttgtttt gtaaaattaa atttagatag
      241 taaataaagt gccatatcag attttgcatt gcctagagaa taagcaagag cttgatgagc
      301 cattttttta tcagtcacct tattgttaat ttcttcataa ttggatgctt taatggcatc
      361 ctccaaagat atatctctga gtcttatctt tttgaagtta tctgtgctta gcattcttgg
      421 tatatgatac tcaagctgaa acacaaagtt tataattcta tccagactaa caggatcaat
      481 gtttttatta taacaaaact ctcggaatct ttgatcttta ctctttctta taaaatcaat
      541 aagatgcaac ccaattccaa gcctcatatc tttagtatta aatattggca catcagtttt
      601 tccctgatta ccatgcacat acctgctaac ttcatccaca acctctttaa agttatctaa
      661 gaaaaatgat tggtgctcat ggtaaaaaac aggtggaata gcattatcaa agtggtcggt
      721 taatgtcata tatccatatg gagagtcatg atcaatgata tacgcattag caccaaaatc
      781 cacagtatga tgtgttttat ttagtgggag tttttcttga tgattggaaa tttcgacccc
      841 aaaaaaaaca aaatcgtggt tagctatttc ttcaatatcc tcagagaatg tgtttttata
      901 tgtttgtata ttctcagact taattttatc aaaggactta atattaagag tattatttga
      961 caggttagcg ttactttgat gtctgaagtt aaaatcagaa ttaataataa tagagagcaa
     1021 gtgacgttca tccgaagaaa gaggatgagt tttttgtatt atttcagaaa gatagtgtct
     1081 ggacacctta tcgaggtgct caagtgaccg aaatgatgac cgtgctccag atggcgcttc
     1141 aatagaaaga tttaatgatt tgaaactggt cccttgagag aacattttac tataactttg
     1201 cgctgctata gacttcctta aaaagctttt cacagtatca gcacagtgat ctaaatgttt
     1261 ttcacttatg ccagaagagg atgagtttgt tacgcatgat atgttttttt gtaatgcttt
     1321 tgtatctttg ttcggattta tttttccatc aacaagatca atattgttct gaacattaat
     1381 atgatttact gcttcaggta ttttcataaa acatccccca ttatgtgcgt ttttatctgc
     1441 agttatttag aataatatta tctaacttaa tattttcttg tatgtattat aacgaacata
     1501 ttttaatatg ttgtacgatt ttcactctga aatcccctga gtttaatcac acttccttta
     1561 ctgaaaggaa ttattgcaac agtattattt gtttttggat atatatcttg cgccttgtta
     1621 tgtagttaat gctcagaata tgatagataa aatagagacg cagaacaggg catgctcata
     1681 acatgatgat aacataaaaa attagtaaca ataaatgaaa gaatcatggg cgctcaacaa
     1741 aaagagagct aaatagctgc gcggaatagt aggctgtgtc ccttaatcat ctgagttata
     1801 gtaactgtct gtttacacaa catattgaac tatggctcgc tacgaccttc ccgatgaggc
     1861 atggaccatc atcaag
//
LOCUS       DAJVTL010000292         1841 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.297, whole genome shotgun sequence.
ACCESSION   DAJVTL010000292 DAJVTL010000000
VERSION     DAJVTL010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.297"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..458)
                     /locus_tag="OQQ26_004481"
     CDS             complement(<1..458)
                     /locus_tag="OQQ26_004481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859670.1"
                     /translation="MKGLENAIRNLNSLDTRMVPQASAWAINRVAQKAVSVATRQVAG
                     NTVAGDNQVKGIPLKLVRQRVRVFKASPSGKMTARIRVNRGNLPAIKLGTARVRLTRR
                     GGKLQYRGSVLKVGKYLFRDAFIQQLANGRWHVMRRIDGKNRYPIDVVKIP"
     gene            complement(470..745)
                     /locus_tag="OQQ26_004482"
     CDS             complement(470..745)
                     /locus_tag="OQQ26_004482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA breaking-rejoining protein"
                     /protein_id="HCS1859671.1"
                     /translation="MSDPFSRLAARMDAITVRKMGKTASINDVDMTVIPGETLAELNA
                     LSGPAVSLVVFSSGYRPRRGDRVVYDGQHWTVTRHERFNGKPMIFIE"
     gene            complement(738..1061)
                     /locus_tag="OQQ26_004483"
     CDS             complement(738..1061)
                     /locus_tag="OQQ26_004483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308857.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2190 family protein"
                     /protein_id="HCS1859672.1"
                     /translation="MAKNFVEEGKTVAIVASAAISSGDLVQVGDVFAVALTDIPQGET
                     GDGLTEGVFMLPKLKTDDMKTGKKVYLKSGKVQLTNSGSDPLVGVVWADAGTSAEEVP
                     VKLNV"
     gene            complement(1148..>1841)
                     /locus_tag="OQQ26_004484"
     CDS             complement(1148..>1841)
                     /locus_tag="OQQ26_004484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308856.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HCS1859673.1"
                     /translation="GAEYKYVTTGDKQATIALATYGELFSITRQAIINDDLNMLTDVP
                     MKLGRAAKSTIADLVYAILTSNPKISTDNVSLFDKAKHANVLESAAMDVASLDKARQL
                     MRVQKEGERHLNIRPAFVLVPTAMESVANQVIRSSSVKGADINAGIINPVKDFATVIA
                     EPRLDDNSQTTFYLAASKGSDTIEVAYLNGVDTPYIDQMEGFSVDGVTTKVRIDAGVA
                     PVDHRGLVKCTA"
BASE COUNT          415 a          551 c          423 g          452 t
ORIGIN      
        1 gggattttca ccacatcaat ggggtaacga tttttgccat caatacgccg catcacatgc
       61 cagcgaccat tcgccagttg ctgaataaac gcatcccgga aaagatattt acccaccttc
      121 agcacgctgc cacggtactg cagttttcca ccacgccggg tcagtctgac ccgggcggtc
      181 cccagcttaa tggcaggcag attgccccgg ttaacgcgga tcctggccgt catttttcct
      241 gacggactgg ctttaaacac ccggacacgc tgacgtacca gtttcagggg tatccctttc
      301 acctggttat ctcccgcaac ggtattcccg gcaacctgcc gggtggcaac cgagaccgct
      361 ttctgtgcca cacggtttat cgcccatgcg ctggcctgtg gcaccatacg ggtatcaagg
      421 ctgttcagat tgcggatggc attctcaagc cccttcatcc cacacctctt tactcaataa
      481 agatcattgg cttaccgtta aagcgttcat gccgtgtgac cgtccaatgt tgtccgtcat
      541 aaacaacgcg atccccgcgc cgtgggcggt atcccgaaga aaacaccacc agagagaccg
      601 caggtccgga cagagcattc agctctgcca gtgtttctcc cgggatcaca gtcatatcga
      661 catcattaat cgaggctgtc tttcccatct ttctgaccgt gatcgcatcc atacgcgctg
      721 ccagccggga aaagggatca gacattgagt tttaccggca cttcttctgc actggttccg
      781 gcatctgccc agacaacccc gaccagcgga tcagagccgc tgttagtcag ctgaactttt
      841 ccggacttca gataaacctt cttacccgtt ttcatgtcat ccgttttcag cttaggcagc
      901 ataaacacac cttcggtcag gccgtcgcct gtttcaccct gtggaatatc ggtcagcgcc
      961 accgcaaaaa catcacccac ctgcaccagg tctccgctgc tgatggctgc actggcaaca
     1021 atcgccaccg tttttccttc ttctacaaaa ttctttgcca taactgtctc cgcacagccc
     1081 cgttcagggg ctgatttcag gtacaaaaaa agcccttacg ggccatcaga gttgttgtct
     1141 gcgacgttta cgccgtacat ttcaccagac cgcggtgatc aactggcgcg acaccggcgt
     1201 caatacgcac tttcgttgtc acgccatcca cactgaagcc ctccatctga tcaatatatg
     1261 gcgtatccac accgttgaga taagccactt caatcgtatc ggagcctttt gacgcagcca
     1321 ggtagaaggt ggtctggctg ttatcatcaa gacggggctc tgcaataacg gtcgcaaaat
     1381 ctttcaccgg gttaataata ccggcgttaa tgtcagcccc cttgacactt gaggagcgaa
     1441 tgacctggtt agcaacagac tccatcgccg tcggtaccag tacgaacgca ggacgaatat
     1501 tcagatgacg ctccccctct ttctgaacgc gcatcaactg gcgggcttta tccagcgatg
     1561 ccacgtccat tgcagcgctc tccagtacgt ttgcatgttt cgctttatcg aacagactta
     1621 cattatctgt ggagattttc gggttagacg tcagaatggc ataaaccaga tcggcaatag
     1681 tggatttcgc cgcacggccc agtttcatcg ggacatcggt cagcatattc agatcatcat
     1741 tgataatggc ctgacgggtg atactgaaca gctcgccata ggtcgccagt gcaatagtgg
     1801 cctgtttatc tccggtggtg acgtatttat attccgcccc t
//
LOCUS       DAJVTL010000293         1835 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.298, whole genome shotgun sequence.
ACCESSION   DAJVTL010000293 DAJVTL010000000
VERSION     DAJVTL010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.298"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(488..1015)
                     /locus_tag="OQQ26_004485"
     CDS             complement(488..1015)
                     /locus_tag="OQQ26_004485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001164091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1859674.1"
                     /translation="MQHLKNITAGNPKTVEQYQLTKDFDVVWFFSEDGKNWYEEQKYF
                     ADDTIKIAYDKDNIIHYVEKDVTAIRPDGLSVVEVADITANRRADISGNWMFKDGKVI
                     KRVYTAEELQQQAEIRKARLLADAESVILPLERAVRLNMATDEERSRLESWERYSVLV
                     SRVDPANPEWPEMPQ"
     gene            complement(1019..1489)
                     /locus_tag="OQQ26_004486"
     CDS             complement(1019..1489)
                     /locus_tag="OQQ26_004486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="s domain protein"
                     /protein_id="HCS1859675.1"
                     /translation="MYEAYNNGYPTAYGNVLHLTGVTAVGEGELLIGWSGTSGAHAPA
                     YIRSRRDTTDANWSGWAQLYTTAHKPSAGDVGAYTKTESDSRYVRDMRLGGASTYKPA
                     NNGTTWTHQAPSGCVYTGIIVQDTGSNSADNIGGVYYRPVQKYINGTWYNVVQV"
BASE COUNT          448 a          476 c          374 g          537 t
ORIGIN      
        1 ggggaggtaa cccccctgcc tttaatcaag ttcctccatc ccttacgggc gtccggtcag
       61 ttgcttgatg gcaaccagac cagctagcat tatttgcatc accagtaaga ctgttgttag
      121 cgttatcact tcgacgtctc ctcttccagg agagcgccac acgtagtaag tgcttttggt
      181 tctacccgcc cccctcactc cgcataccat tagttagcag gtacaagcag cactctttcg
      241 tgtggtaagc aaacaggaca gcactggact gacgccttga gctttaatat ttccttccga
      301 tccatacaac taggtctgtt aaaagcccct aggacgaatt ctacagagat ggctatggtg
      361 caggtttcgg ctatagggct ctttgatgta atcgagggtc ataacgttgg caatgtctgc
      421 tcctggcaca gagcggacta tcagattagg ctttactctg tgccatagat atgtaagcta
      481 atacaactta ttgcggcatt tccggccatt caggatttgc aggatccaca cgactgacca
      541 gaacgctgta gcgttcccat gattccagtc ggctacgctc ctcatctgtt gccatgttca
      601 gtctgaccgc gcgctccagc ggcaaaatca cggattcagc atctgcaaga agtctggctt
      661 tccgaatttc tgcctgctgc tgtaattcct ctgccgtata aacgcgttta atcactttgc
      721 cgtccttaaa catccagttc cctgaaatgt ccgcccgtcg gttagcagta atatccgcca
      781 cttcaacaac acttaatcca tccggtctga tagctgtcac atccttttcc acatagtgga
      841 tgatattatc tttgtcgtac gctattttta tcgtgtcatc agcaaaatac ttttgttctt
      901 cgtaccagtt cttaccatct tctgaaaaaa accagacaac atcaaagtcc tttgtcaatt
      961 gatattgttc aaccgttttt ggattacccg ccgtaatatt ttttaaatgc tgcataaatt
     1021 atacctgcac cacgttatac catgtcccgt taatgtattt ctgcaccggt ctgtaatata
     1081 cgccaccaat gttatcggca gagtttgagc cggtatcctg aacaataatg ccggtatata
     1141 cgcaacctga cggagcctga tgcgtccatg tagtaccatt atttgctggt ttatatgtag
     1201 atgcaccgcc cagccgcatg tctctcacat aacgtgaatc tgactcagtt ttggtgtatg
     1261 caccaacatc tcccgctgag ggtttatgag cagttgtata tagttgcgcc catccagacc
     1321 agttagcatc tgtggtatct cgtcgggaac gaatatatgc cggagcatga gcaccgctgg
     1381 ttccactcca accaataagt aactcaccct ctcctactgc ggttacgcca gtgagatgaa
     1441 gcacattacc ataggctgtt gggtagccat tgttgtatgc ctcatacatc tgaatacctg
     1501 gtgtcccctt tacgctccca cctaatgcag taacacggtt tctggatacc agtgtattaa
     1561 tatttatatc ggcagagcca tcaaatctga caccattaat atttcttgcg ttcgctaact
     1621 tcgttgctgt tgcagcattt cctgaaaggc tggaaataaa tggatgtgaa cagtaataac
     1681 cacgtccatt tttaaaatcc agaatagcct gtgcgttcgt gctttctgta gcgggattag
     1741 ttgcccccca cttatatgtc gtttgaccga cgacataatc ctctgtcgga acaataaccg
     1801 ttagcccttc ctctgcaaga atttgtacag ggaaa
//
LOCUS       DAJVTL010000294         1832 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.299, whole genome shotgun sequence.
ACCESSION   DAJVTL010000294 DAJVTL010000000
VERSION     DAJVTL010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.299"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..606
                     /gene="paaC"
                     /locus_tag="OQQ26_004487"
     CDS             <1..606
                     /gene="paaC"
                     /locus_tag="OQQ26_004487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate-CoA oxygenase subunit PaaC"
                     /protein_id="HCS1859676.1"
                     /translation="QARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFA
                     DTIARQYFIDAWHVALFTRLMESREPQLAAISAKAIKEARYHLRFSRGWLERLGNGTD
                     VSGQKMQQAINKLWRFTAELFDADEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEAT
                     LNVPQEQAYRTGGKKGLHTEHLGPMLAEMQYLQRVLPGQQW"
     gene            621..1106
                     /gene="paaD"
                     /locus_tag="OQQ26_004488"
     CDS             621..1106
                     /gene="paaD"
                     /locus_tag="OQQ26_004488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate degradation protein PaaD"
                     /protein_id="HCS1859677.1"
                     /translation="MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQM
                     GEGWVIGFTPTYSGCPATEHLIGAIREAMSTHGFTPVQVVLQLTTDWMTPDARERLRE
                     YGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKC
                     I"
     gene            1114..>1832
                     /locus_tag="OQQ26_004489"
     CDS             1114..>1832
                     /locus_tag="OQQ26_004489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation protein"
                     /protein_id="HCS1859678.1"
                     /translation="MTTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTL
                     KASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGH
                     FGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQA
                     LADLKDKYPQRLQLLCIFSQETLDSDLLHGRIDGEKLQSLGASLINFRLYDEAFICGP
                     AAMMDETEAALKALGMPDKTI"
BASE COUNT          435 a          481 c          500 g          416 t
ORIGIN      
        1 caggcacgca acttcttatc gtatgccgct gaattagcgg gagaaggcga tgaagatacc
       61 ctggccttca cccgagacga gcgccagttc agcaacttat tgttggttga acaaccaaac
      121 ggcaattttg ccgacaccat tgcacgccag tatttcatcg atgcatggca tgtggcgctc
      181 tttacccgtc tgatggaaag ccgcgagccg caactggcag cgatttctgc caaagcaatt
      241 aaagaagcgc gttatcacct gcgttttagt cgtggctggc tggagcgact gggcaatggt
      301 actgacgtat cagggcaaaa gatgcagcag gccatcaaca agttgtggcg ttttactgcc
      361 gaactgttcg atgccgacga gattgatatt gcactgagtg aagagggtat tgcggttgat
      421 ccacgcactt tacgcgcagc gtgggaagcc gaagtttttg ccggaatcaa cgaagccaca
      481 ttgaacgtgc cgcaagagca ggcgtatcgc actggcggta aaaaaggact gcataccgaa
      541 caccttgggc caatgctggc agaaatgcag tatctccagc gtgtcttgcc cggtcagcag
      601 tggtaacaga ggagatgggt atgcaacgtc tggccaccat tgcaccgccg caggtgcatg
      661 agatatgggc gctactcagc cagatcccgg acccggagat cccggtgctg accattaccg
      721 atttaggcat ggtgcgtaat gtgacacaga tgggagaagg atgggtgatc ggctttacgc
      781 cgacatattc cggttgtccg gcaacggaac atttgattgg cgcgatacgt gaggcaatgt
      841 caacccacgg gtttaccccc gttcaggttg tgctgcaact gaccaccgac tggatgaccc
      901 ccgatgcccg tgagcgtctg cgagagtatg gcattagccc gcccgccgga cacagttgcc
      961 atgcccattt gccgccagaa gtacgttgcc cgcgctgcgc cagcgtccat accacactta
     1021 tcagtgaatt tggttccacg gcctgcaaag cattgtaccg ctgcgatagt tgccgcgaac
     1081 ctttcgatta tttcaaatgt atttgaggat gccatgacaa cgtttcattc cttaacagtg
     1141 gcaaaagtcg agccggaaac ccgtgatgcg gtgaccatta cctttgcggt gccccagcct
     1201 ttgcaggagg cgtatcgctt tcgccccggt caacatttga ccttaaaagc cagctttgat
     1261 ggtgaagaat tacgccgttg ttactccatt tgccgcagct acctgcctgg cgaaattagt
     1321 gtggcggtaa aagccattga aggcggacgt ttctcccgct atgcccgcga acacatccgc
     1381 caggggatga cgctggaagt catggtgccg caggggcatt tcggctatca gccgcaggcc
     1441 gaacgccagg gccgctatct ggctattgca gcaggatcag gtattacgcc aatgctggcg
     1501 attatcgcca ccactttaca aaccgagcct gaaagtcagt tcaccctgat ctacggtaac
     1561 cgtaccagcc agagcatgat gtttcgccag gcactggcag acctgaaaga caaatatcct
     1621 cagcgtttac agttgttgtg cattttcagt caggaaaccc tcgacagcga tctgcttcac
     1681 gggcgtattg acggtgaaaa attacagtca cttggggcct cgctcattaa ttttcgtctt
     1741 tatgatgagg catttatttg tggtccggcg gcgatgatgg atgagacgga agccgcctta
     1801 aaagcactgg gaatgccaga taaaaccatt ca
//
LOCUS       DAJVTL010000295         1807 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.300, whole genome shotgun sequence.
ACCESSION   DAJVTL010000295 DAJVTL010000000
VERSION     DAJVTL010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.300"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..406)
                     /locus_tag="OQQ26_004490"
     CDS             complement(<1..406)
                     /locus_tag="OQQ26_004490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase"
                     /protein_id="HCS1859679.1"
                     /translation="MSIEYILIGKHHGGSDYWRTPFLLFKNLHREFGFTLDGAATKHD
                     TLLPRFTDDIHNQSWDGERVFCNPPYSDTKTFLSKASEADLAVFLIPYRPHTTYWLKH
                     IFTNPLCHEIRILHRAVKFLPPAGHNGLAIRSP"
     gene            complement(743..1291)
                     /locus_tag="OQQ26_004491"
     CDS             complement(743..1291)
                     /locus_tag="OQQ26_004491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000268372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1859680.1"
                     /translation="MAVIGYCRVSTQDQTVDNQKLQIEKVHKVDKWFIDEAVSGATKA
                     TSRDGFRDMMNYVRCDDTLVVVAIDRLGRNTVDVLSNVESLQTRGVRVVSLREGFDLS
                     TSIGKAMLTMMAGLADLEKDLISERRKAGIERAKAEGVHMGRPVKASSEAVQTLISQG
                     KTRLQIQEELGISKATYYRLAK"
BASE COUNT          530 a          373 c          332 g          572 t
ORIGIN      
        1 acggtgaacg aatagcaagc ccgttatgcc ctgctggtgg aaggaattta actgcacgat
       61 gaagaatacg gatttcatgg caaagcgggt ttgtgaagat gtgcttaagc cagtatgtgg
      121 tgtggggtcg gtacggtatc aggaataccg ctaaatctgc ttcagatgct tttgagagga
      181 atgttttagt gtcgctgtat ggtgggttac agaatacccg ttcaccatcc catgactgat
      241 tgtgaatatc atcggtgaat cgtggtaaca gcgtgtcatg cttagttgca gcaccatcta
      301 gcgtaaaacc aaattcacgg tgtaagttct taaataacaa aaatggagtt ctccagtaat
      361 cagaaccccc atgatgttta ccgattaaaa tatactcaat tgacataaga aataaaaatt
      421 tttattgcaa tcactcttga caaggtttac tctcttttaa gagatgctta acaggctttc
      481 taaacggata tcctttctgg gatatctatc ttttatctta aaagtcttta cagatacttt
      541 aaagatgtct gtatatattc tgtacagtaa cttttcagac tctgaaaatt tttataaaat
      601 cgtagtagcc cctcttcaaa ttcccttcac cgataatctt caaaaatatc tgtatagctg
      661 cttagtacgg tacattctcg atatagcacc tcctttgcag aattttaaaa tatcagacac
      721 atccatgtaa ctattcaata acttatttag caagtctgta ataagttgct ttagagattc
      781 ctaactcttc ctgaatctgc aaccgtgtct taccttgtga aataagcgtc tgtacagcct
      841 ctgaagaagc ttttacaggt cttcccatat gtaccccttc agctttagca cgttctattc
      901 cagcctttct acgttcactg ataaggtctt tttcaaggtc agctaaacca gccatcatag
      961 taagcattgc tttaccgatt gatgttgata agtcaaaacc ttcacgtaga gaaacaaccc
     1021 tcacacctct agtctgtagt gactccacgt tagagagcac atcaacggta ttacgcccta
     1081 aacggtcaat agctaccaca actaacgtat cgtcacacct tacatagttc atcatgtctc
     1141 taaaaccatc tctgctggtg gcctttgttg ctcctgagac agcctcatca ataaaccatt
     1201 tatcgacctt gtgaaccttc tctatctgta gtttctggtt gtctacagtc tggtcttgtg
     1261 ttgataccct gcaataacca atcaccgcca tacatccccc ttagaaatct caaaagttag
     1321 tctcataagt ttggctgtct cataatccaa aaacaacctt ttgagactac ttgagggggc
     1381 attctaccgt tacgttgaaa gtgtctcaaa aggaagtcct tatgagactg gttaatagag
     1441 cgctatgaag attcaggagg gtaactataa ccattacttt ctaatattca cgcagatgat
     1501 tgttaagtgg tttaatagtc actttgagag agtattgatg gtgaccaact gcatagatat
     1561 cgttatatat tcctgtaaat agcgcttttc caagtgtctg gagaggaacg actaacaccc
     1621 tgcatagttt cctgaaaaga agttttacag attctttata tatttcaata atttatacca
     1681 aaaagggact atatcgatac tgtatggaat ctgtgcagga ttgcatggat acttggaaat
     1741 ctaccgttaa attgcatagt cattcacctg atattgtcct gtaattaaca ggtagttgat
     1801 tcggatg
//
LOCUS       DAJVTL010000296         1785 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.301, whole genome shotgun sequence.
ACCESSION   DAJVTL010000296 DAJVTL010000000
VERSION     DAJVTL010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.301"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..154)
                     /locus_tag="OQQ26_004492"
     CDS             complement(<1..154)
                     /locus_tag="OQQ26_004492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000410412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1859681.1"
                     /translation="MEKFHMFDDRIYQMTNGVKAADRIIYTVMLNEQKFYHDKGQYYT
                     PSYAHLG"
     gene            1180..1749
                     /locus_tag="OQQ26_004493"
     CDS             1180..1749
                     /locus_tag="OQQ26_004493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001258746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1859682.1"
                     /translation="MRTFLYARVSVDDLTTQNQVEAVKRAGYEVRPSRVIEETISGAT
                     PAMDRPQFVKLVDKLEEGDCLVVTKIDRLGRDNIDVQKTVTMLLDMGVKLVCLDLPVQ
                     DLSSAEGKLILQLFSTFAEFELNRIRERTREGLERAKAQGKVLGRPVAVNTTEAVLEH
                     KAKGLSQSQVAKLLNLSVRTVSRHWTKTL"
BASE COUNT          586 a          339 c          346 g          514 t
ORIGIN      
        1 gaccaagatg agcatatgaa ggggtataat attgcccctt atcgtgataa aacttttgtt
       61 cattcaacat gacagtgtaa ataatacggt cggcagcttt aacgccatta gtcatctgat
      121 aaatacggtc atcaaacatg tgaaattttt ccattacgtt ttccttttta aaaataaaac
      181 aaagaaaggg ctgaccacgt atagtgacca accccagagg gagtgaatta attagaagat
      241 ggactgataa aggaactcag aagcctgagc gattacgcga gtattaacag caaaaggaaa
      301 agccttgaat gaataagagg ctgtgaaaat ccgtcaatac cctgacgcct cccaacgttg
      361 taacctctta atgttctgag ttcttttatc agcccatata gaaactataa cagatgtgat
      421 tataaattgc aacaattatt tcacagagta attactgatt gattataaat taatcaatca
      481 aactaaaggg tattgacaaa gggcttgaca agattttacc cttttaaaag gtacttaaaa
      541 gattgttaaa cagggttttc tttctggttt cttctctctc ttaaaagcct tttaagaatc
      601 tctgtataga ggtagtaagt ctcaaaaact ctatgagata atttctaaaa catatctatc
      661 agacttcacc agacgcattc taagccccta aatcgggtaa ctctggcaat caccttaagc
      721 actctgaaaa tagctttaaa actcgctaca gagcttcctg tgaactggtc tatgaatagc
      781 ctaaactggt tgataggttt gattgaaatc tgtacaggca atatttagct tctgaaaatt
      841 tttataaaaa ataatcagac ctcttctaag tctcttcaac caaatctttc aaaaatatct
      901 gtctaggatg tatagctgct aagtacccgc cacaccagct atgtgacccc ctttgcagaa
      961 ttttaaaata tctattgact ttctctatga attactgtaa gggcatctat ctgggtcttt
     1021 aactgtataa atacacatga caacaaacac ccgttaaatg tctacttcaa aaggtagctg
     1081 tagctgtagc tgtagctgta gacaacaatt gtgataattg atttaatgtc tataggcaaa
     1141 caaaacagac ctttgttggc tatatagaga gataagaaca tgcgtacatt cctttatgct
     1201 cgtgtatcag ttgatgacct caccacacag aaccaagtag aagctgttaa acgtgctggt
     1261 tatgaagtca gaccttcacg agtgattgag gaaaccatta gtggggctac accagctatg
     1321 gacagaccac aatttgtaaa gctggtggat aagctggaag aaggtgattg tcttgtagtg
     1381 accaagattg accgtttagg aagggataac attgatgtac agaagaccgt cacaatgtta
     1441 cttgatatgg gtgttaagct agtctgtcta gacctgcctg ttcaagacct ttcaagtgct
     1501 gaaggtaaac ttatccttca actattcagt acctttgcag agtttgaact taatcgcatc
     1561 agagagcgaa ccagagaggg cttagaacga gctaaagcac aaggtaaggt cttaggtcgt
     1621 cctgtagctg tgaacactac agaagccgtt ttagagcata aggctaaagg attgtcacaa
     1681 agtcaggttg caaagcttct gaatctctct gtaagaacgg ttagccgtca ctggacaaag
     1741 acactgtaaa aaacttagta gcatcttcat agcctccttc atggg
//
LOCUS       DAJVTL010000297         1762 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.302, whole genome shotgun sequence.
ACCESSION   DAJVTL010000297 DAJVTL010000000
VERSION     DAJVTL010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.302"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(3..1073)
                     /locus_tag="OQQ26_004494"
     CDS             complement(3..1073)
                     /locus_tag="OQQ26_004494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001548253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HCS1859683.1"
                     /translation="MSLMLSRHGIWYYRKVNVLPCGKRREFRRSLGTRSKTEATKRSL
                     RFADRPWLITETISPTIGMSQTPQSELSFQELKLQAVQYVEFKNLEVCEREAASIKRC
                     IDKYFSFTDQVFKRSRAAEFISGLDVAIPTKNKYVKKISGFFRWLKHRTDYDFQNPFE
                     GLLQKDREPVSQKREAYTSAQIRCLENGISALPDWKRWIILLGRFTGMRANEICQLYH
                     GDILKNEGRWCIRIDDRHGGQVVKTENSKRIIPIHQKLIDIGFLVYVQKQKGRLFPQL
                     TFYKGSYSHYFTRWFSGYRKKLGVPEFHSLRHYIATKLKNAGVVEHYAAAFLGHADNS
                     ITYRRYGKSVAVSQLYDLLEHI"
     gene            complement(1182..1278)
                     /gene="ffs"
                     /locus_tag="OQQ26_004495"
     ncRNA           complement(1182..1278)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="OQQ26_004495"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            1441..1752
                     /locus_tag="OQQ26_004496"
     CDS             1441..1752
                     /locus_tag="OQQ26_004496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HCS1859684.1"
                     /translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
                     VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
                     Y"
BASE COUNT          467 a          435 c          392 g          468 t
ORIGIN      
        1 aatcaaatat gttctaatag gtcatatagt tgagataccg cgactgattt accatatctt
       61 ctgtatgtaa ttgaattatc tgcatgtcct aagaatgcag cagcataatg ctccactaca
      121 ccagcgtttt ttaacttagt ggcaatgtaa tgtcgcagtg aatgaaactc tggaacccct
      181 aattttttgc gataaccgct aaaccagcga gtgaagtagt ggctgtatga ccctttatag
      241 aaagttaact gcgggaacag tctgcccttc tgtttctgta catacaccaa aaatcctata
      301 tctatcaatt tttgatgaat tggtattata cgtttactgt tctccgtttt gaccacctgt
      361 ccaccatgac gatcatcaat cctgatgcac caccttccct cattttttaa gatatcacca
      421 tgatatagct ggcaaatttc attagctctc atccccgtaa atcgcccaag caaaataatc
      481 catctcttcc agtcgggtaa ggcactaatc ccattctcta ggcatctgat ctgagcagag
      541 gtatatgctt ctcgcttttg ggaaactggc tcgcgatcct tttggagcaa cccctcaaag
      601 ggattttgaa aatcatagtc agtacggtgt ttcagccatc ggaaaaaacc actgattttc
      661 ttaacatatt tgttctttgt aggaatcgcg acatccagcc cgctaatgaa ttcagcagcc
      721 ctgctacgct taaacacctg atcagtgaag ctaaagtact tatcaataca gcgtttgata
      781 gaagcggctt ccctctcgca aacttcaagg tttttaaact caacatactg tacagcctgt
      841 aattttagct cttggaatga caattctgat tgaggggttt ggctcatacc gattgtagga
      901 ctgatagttt cagtaatcag ccaagggcga tctgcaaagc gtaaagatcg ctttgtcgct
      961 tcagtctttg aacgagtgcc taacgaacga cgaaactcac ggcgtttacc acagggtaaa
     1021 acgttaactt tacggtaata ccagatccca tgacgggaga gcataaggga catcgtgcag
     1081 cctactggtg atacacagtt tttgtaccac taaggctatg gaggagagaa ttcagtactt
     1141 tagcgtatag ctatcaagta cttaccctga aatgggtggg ggcctgccag ctacatcccg
     1201 gcacacgcgt catctgcctt ggctgcttcc ttccggacct gacctagtaa acagagtagc
     1261 gttgcgggag aaccaacaga gcccccattg agagcgttga gaaccaacgc gcaggcgcat
     1321 tatcactgct gccccggcta attgcaaccc atcgcgtgcc agatgctggt ttcttgcgca
     1381 atgcgacttc actcgggcgt ttttccagat tatgctgaaa aattacctca ggaagaaaag
     1441 atggaaaaag aagattcatt tccccaacgc gtctggcaaa tcgtcgccgc tattcccgaa
     1501 ggctatgtca ccacttacgg tgatgtggcg aaactggcgg gatcgccccg cgccgcgcgc
     1561 caggtgggcg gtgtgttaaa gcgtctccct gaaggcagca ccttaccctg gcaccgggtg
     1621 gttaatcgcc acggcacaat ttcgctaacc ggaccggatt tacagcgtca gcgacaggca
     1681 ttactggcag aaggtgtgat ggtatcggga agcgggcaaa tcgacttgca gcgttatcgc
     1741 tggaactact aaccctctcc gg
//
LOCUS       DAJVTL010000298         1704 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.303, whole genome shotgun sequence.
ACCESSION   DAJVTL010000298 DAJVTL010000000
VERSION     DAJVTL010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.303"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..715)
                     /gene="ipaH7.8"
                     /locus_tag="OQQ26_004497"
     CDS             complement(<1..715)
                     /gene="ipaH7.8"
                     /locus_tag="OQQ26_004497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH7.8"
                     /protein_id="HCS1859685.1"
                     /translation="MFSVNNTHSSVSCSPSINSNSTSNEHYLRILTEWEKNSSPGEER
                     GIAFNRLSQCFQNQEAVLNLSDLNLTSLPELPKHISALIVENNKLTSLPKLPAFLKEL
                     NADNNRLSVIPELPESLTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLK
                     FLHVYYNRLTTLPDLPDKLEILCAQRNNLVTFPQFSDRNNIRQKEYYFHFNQITTLPE
                     SFSQLDSSYRINISGNPLST"
     gene            1044..1223
                     /locus_tag="OQQ26_004498"
                     /pseudo
     CDS             1044..1223
                     /locus_tag="OQQ26_004498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1240..1616)
                     /locus_tag="OQQ26_004499"
                     /pseudo
     CDS             complement(1240..1616)
                     /locus_tag="OQQ26_004499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          505 a          305 c          365 g          529 t
ORIGIN      
        1 gagtcgacaa tggattccct gaaatattaa tcctgtaact tgaatctaat tgtgaaaaac
       61 tctccggaag agtggttatc tgattaaaat gaaaataata ttccttttgt ctgatattgt
      121 ttctatcaga aaattgagga aaagtaacca gattattgcg ctgagcacag agaatttcca
      181 gtttatccgg taagtcgggt aatgttgtca gcctgttata ataaacatgt aaaaatttca
      241 atttttcggg aagagccggt aagttatata gcctgttatt ttcaacaaat aatgatgtta
      301 aatggtttgg caaaacagga aggttttcca gttgattaga acgaacactt aaagttgtta
      361 atgactcagg aagttctggt atcacagaaa gcctgttatt atcagcatta agttctttga
      421 gaaatgcagg cagctttggc aatgatgtta atttattatt ttctacaatc aaagcagaaa
      481 tatgctttgg taattcggga agagacgtca aatttaggtc tgataaattt aatactgctt
      541 cttgattctg aaagcactgg gagagtctgt taaaagcaat gcctcgctct tccccgggag
      601 aagagttctt ttcccattca gtcaggattc tcagataatg ttcattactg gttgagtttg
      661 agttaataga gggggagcaa gaaactgatg agtgtgtatt atttacagag aacataatgc
      721 taggtcaacc ttatatttgt gagaataaat atttaaaatt gtatatttat acaaatttca
      781 cttaccattt ccgatattaa gttttaatag tttccatttt acacataaca gaagttagtt
      841 gtaatttatt tatggaggtt ttctatggaa ttcttttttt attgtgagtg cagtcaataa
      901 taacactgaa ttcaacattc cagtgagcaa ggaaatgtaa ttcgagtaag tatatttgtt
      961 ttacatcata ttttagtcaa gctcatttat tcctattata gaatgataaa ttaaaattac
     1021 tgtaaaaaaa cgatacacat ttaatacgag ggaggccggc agaaaaacgg cttgcggtaa
     1081 ggcagaagaa atgtgtgccg cgaatgaagt ccttgtatga ctggataaag ctccagagga
     1141 aaactttgtc aaaccatgct gaaatggtaa aggcgttcaa ctatatcctg aatcactgga
     1201 atgcactgac tgagttttgc cgggtagtac ttccaatcat tagaatatgt gcttttcaat
     1261 gaaggaaccg atgacttttt cgtggatttc cacggaacgc gagaagcaga ttgttttacg
     1321 tgccagccgc ttgatgcggg ggcggagggt caggttgtta cgttcatacg ttgcgtgaag
     1381 attttgccgg tcaggtgttt ctcctccggc acttctctgg cgtagctgcc ccagtcatcg
     1441 ctggtcacca tgccgataca gaacggagtc aacagggcta acagttcccg acaggtctca
     1501 tcattccgtg gcccgcaagt gtaagccaac acaccgccag ttttagtgtt gtacgcatac
     1561 cagagccggt gttgttgcgc cttgctgcca acgaagcgcc actgctcatc aagttcacgt
     1621 ataggaaatt gaaaaaccag acgataccgc tgtccacgcc ttatgccacg tgagcttttc
     1681 tgcttttccc tccactccgg tgtt
//
LOCUS       DAJVTL010000299         1692 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.304, whole genome shotgun sequence.
ACCESSION   DAJVTL010000299 DAJVTL010000000
VERSION     DAJVTL010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.304"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..306
                     /locus_tag="OQQ26_004500"
     CDS             <1..306
                     /locus_tag="OQQ26_004500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859686.1"
                     /translation="NTDNSITFAVNGQVIPLNYGNFDARYKHRTEGVQDVRYGHEMYY
                     GPGSNTVSWTFRAPSGHGLSGVKISDTHRNSADNVDGVYYRPLQKLINGTWYNVASV"
     gene            309..844
                     /locus_tag="OQQ26_004501"
                     /pseudo
     CDS             309..844
                     /locus_tag="OQQ26_004501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000902876.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
     gene            868..>1692
                     /locus_tag="OQQ26_004502"
     CDS             868..>1692
                     /locus_tag="OQQ26_004502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004981847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1859687.1"
                     /translation="MSVVISGALTDGAGIPMSGCHIILKSCVNTSEVVMRTVAEVVTG
                     ADGEYSFEAQTGKYCVYLKPDWRDEYCVGDIAVYDDSKPGTLNDFLIAPDEGDLKPDV
                     VKRFEEMVAQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAEKARQDATVTAEDRK
                     ATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKTANHLSEIAAAG
                     EKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGRAFLYEDVIRFDAKD"
BASE COUNT          470 a          390 c          478 g          354 t
ORIGIN      
        1 aatacagata acagcatcac gttcgccgta aacggacagg taattccgtt aaattacgga
       61 aacttcgatg cccgctataa acatcgaact gagggggtac aggatgtgcg atatggccat
      121 gaaatgtatt acggccccgg cagtaacacc gtttcgtgga catttcgcgc accttcggga
      181 cacgggctat caggggtaaa gatatcggat acccaccgta actcagcgga taacgttgac
      241 ggtgtgtatt accgaccgct gcaaaaactg attaatggta cctggtataa cgtggcgagc
      301 gtttaacaat gttgcattta aaaaatatta ctgcgggtaa tccgaaaacc gcagaacaat
      361 accagatgac aaaaaaatat gatgttaccg ggcttttttc agaagacgga aaaaactggt
      421 atgaagagct gaagaatttc gccagcgaca caataaaaat agcttacacc ggagatggtc
      481 gcgtggtgtg ggtcggtaag gatgtgacag gcatcgagcc acgcaatgcc agcgttatcg
      541 aagttccgga tattaccgct aaccgacgga ttaccgcgcc gggttactgg ttttaccgca
      601 atgatgaatt tgtctttgac tacagactca aagcggaaga tgagcgtgat gcccttctgg
      661 ctcaggtcag tgcccggaca ggggaatggg aagaagacct gctgctgggg ttaatcagcg
      721 agaaaagctg aaagcctgtc gtatttacgc gaaatcgctg caggcgatgg atttcagcac
      781 catcactgat aaatcctcat acaacgccat tgaatggccc gtctctccgg aaggttcttc
      841 ctgatttaat ttatcgcgag aaaaactatg tctgtagtga tatcaggtgc gctgactgat
      901 ggcgcaggta tccccatgtc cggatgccat attattctga aatcctgtgt aaacacctca
      961 gaagtggtga tgcggacggt tgctgaggtg gtaacgggcg ctgatggtga atattcattt
     1021 gaagcgcaga ccgggaaata ctgcgtatat ctgaaaccgg actggcgcga tgagtactgt
     1081 gttggcgaca ttgctgtata cgacgactca aagcccggca cgctgaatga ctttctgatt
     1141 gctcctgatg agggcgacct gaaaccggat gtcgtcaaac gctttgagga aatggtggcg
     1201 caggcgcagc agagtgccgg ggctgcagcc ggaaacgcac agcagacggc gcaggatgtg
     1261 gcggcagccg caacggcccg tgatgatgca caacgttttg cggagaaagc ccgacaggat
     1321 gcaaccgtca cagctgagga cagaaaggcc actgcggaag atgtgacaag cacaggagca
     1381 aatgcagccg cagccggaca gagcgcacag gatgccgcag gttatgcccg cgcagcagaa
     1441 caggccaaaa atgacattga tgctgcgctg accggcactc tgaaaacggc taaccatctg
     1501 tctgaaatcg cagcagcagg cgaaaaggca caacagaagt cccgggataa tctggggctg
     1561 aaaagtgcag ccacgatgga agcacagagc gacatttacg accggacaaa aggccgtctg
     1621 gcgatacccg gcgcattcgg ctttgggcgt gcttttctgt atgaagatgt tatccgtttt
     1681 gacgctaagg at
//
LOCUS       DAJVTL010000300         1689 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.305, whole genome shotgun sequence.
ACCESSION   DAJVTL010000300 DAJVTL010000000
VERSION     DAJVTL010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.305"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            6..443
                     /locus_tag="OQQ26_004503"
     CDS             6..443
                     /locus_tag="OQQ26_004503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiaB family inner membrane protein"
                     /protein_id="HCS1859688.1"
                     /translation="MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYY
                     FAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLS
                     EKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE"
     gene            complement(485..1480)
                     /gene="wecH"
                     /locus_tag="OQQ26_004504"
     CDS             complement(485..1480)
                     /gene="wecH"
                     /locus_tag="OQQ26_004504"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyltransferase WecH"
                     /protein_id="HCS1859689.1"
                     /translation="MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIAN
                     VLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINM
                     ELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMVVIGIIANPNTV
                     PQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFII
                     SRGTLYELQWRGNFADTWYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLG
                     IYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS"
BASE COUNT          504 a          377 c          376 g          432 t
ORIGIN      
        1 ctgtgatgga caacaaaata tcaacctatt caccggcatt tagtatcgtg tcatggatag
       61 ctctcgttgg tggtatcgtt acctatctgt tagggctatg gaatgcagag atgcagttaa
      121 atgaaaaagg gtattatttt gccgtactgg tgttaggact gttttctgct gcgtcttatc
      181 aaaagaccgt tcgggacaag tatgaaggca taccgaccac ttccatttat tatatgacct
      241 gcctgactgt ctttattatc tctgttgcat tactgatggt aggtctgtgg aatgcgacat
      301 tattactcag tgaaaaaggt ttttatggac tggctttctt cttaagcttg tttggtgcag
      361 tagcggtgca gaagaatatt cgtgatgccg gaataaaccc gccaaaagaa acacaggtta
      421 cccaggaaga atacagcgaa taattcacgt aagcccggtc agtccaatgt gaacgggctt
      481 ttacttaact cactaatctg tttctgtcga ttcgttgtac cagcatagaa agtaacaaac
      541 tcgctgccaa cgtcgcgcaa aagatccaaa taatatccag tattggccaa tttttaagct
      601 caattccccg ggtgcgcagc gcatggataa tcaaggcgtg gaatccgtat atacccaatg
      661 aatggcggga gattaagcca agtccgcgaa tggtacgcgt atccagcgtg tttttaacca
      721 gagtcaatag cgcgattgcg cagataaaaa ccatcggccc acagtaaaga taccaggtat
      781 cggcaaaatt tccgcgccac tgcaattcat ataatgtccc gcgagagata ataaaaaccc
      841 ccgtcgcaaa cagcgcggcg ctcacccacg acagtgcttt atgctgtgtg tccatcatcc
      901 ctatagcgcg gcccaacatg ccatacagaa tgtagtaaaa agtatcgcca ttgatatata
      961 agttaattgg cagccattca aaaccgtcaa ttttctgcgg cactgtgttt gggttagcga
     1021 taatgccaat caccaccatt agcaccagca acatttttcc gccgacgttc ttcacctgaa
     1081 tcagcggtga aaccagataa atcaccgcaa tcgcgaagaa aaaccacaag tggtaaaaca
     1141 ctggcttttg cagcaggttt ttcagcgcta actccatatt gatggaggta aacagcgcaa
     1201 tgtagagcag tgcgattgcg ctataaaaaa tcagacataa gccgatacgc aagaaatggc
     1261 gcggctgggc gctgcgttcg ccaaaaaaga gatagccgga aatcatgaaa aatagcggca
     1321 cgctgacacg agaggcagaa ttcagaacat tggcgatatc ccaggtgacg gggctaacac
     1381 tatgagcatt ggtcacatac caggtagtgg tgtgaatcat caccaccatt aaacacgcta
     1441 tccctcgcag gttatcaatc cagtaaattt tgggctgcat ctgtgtctct gtatctggtt
     1501 aaaaaaagtc tgaccgataa atcatttggt tggcgcactg gaataatctg agttttatca
     1561 ctacagctta tagaggctta aggaaattcg taagatatca gccactatac cgatataaat
     1621 aataagactc acctgcaaac cagacggtaa tttaatgatg atgaacgctt tctttccggc
     1681 aatggcgct
//
LOCUS       DAJVTL010000301         1677 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.306, whole genome shotgun sequence.
ACCESSION   DAJVTL010000301 DAJVTL010000000
VERSION     DAJVTL010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.306"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..366
                     /locus_tag="OQQ26_004505"
                     /pseudo
     CDS             1..366
                     /locus_tag="OQQ26_004505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            481..1146
                     /locus_tag="OQQ26_004506"
     CDS             481..1146
                     /locus_tag="OQQ26_004506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001476881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine Rich Repeat family protein"
                     /protein_id="HCS1859690.1"
                     /translation="MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNL
                     LPTNDIDQLISSKHLWYVLVNGINNDPLAQMQYWTAVRNIIDDSKEVTIDISYNLAIT
                     NIDTSDEHLVEVSDNSEGNYIKDNDSMSIRYRSKYYSKDFVLIEETIFSDAELKAILP
                     MRRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDKPSLGYGPTSNNWLSQSFT
                     TEL"
     gene            1209..>1677
                     /locus_tag="OQQ26_004507"
     CDS             1209..>1677
                     /locus_tag="OQQ26_004507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HCS1859691.1"
                     /translation="MKFPSIFNKIKPQSIQQHPEKNQLNWMLELNKWKAERTLTGEIH
                     RPECRNEAAKRINSAFLSKQNDIDLSGLNLTTQPPRLQNFTSINLDNNQLTHFDATNY
                     DRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDINRLSSVTYFSAAH"
BASE COUNT          615 a          325 c          258 g          479 t
ORIGIN      
        1 tggggtaata aatcggttaa taatggtgaa gaaagagcaa ctgccgtgga gcgaattaaa
       61 gaagcttaca attcgaacat ggcatctctt gatttgtcat atcttgattt gagtgaattg
      121 ccgcctatcc cctcgacagt taatacgtta aatctggaaa acaattgtct aacttgtctt
      181 gacttagctg acaatgccag tctcgttaat atcaacctca gcgttaataa aattaacacg
      241 ataacctttc caaatgaatc aaaactggaa aacatttata ttgatcataa caatctggaa
      301 agtttagatt taaaaaatca gcattcattg gttaatctgg aagcgcaaaa caacaaattg
      361 acaaaaatta atatttctga tagttataaa ctgaaacgtc ttaatcttga ttataacaag
      421 ctagcatcgc tggatgtctc ccggcaagag tctctgattg agttaagtgc ccatcacaat
      481 atgatcactg accttatatt acacaatcat cccaggatga aaacaatcac tttaaacgac
      541 aaccatattg cacatttaaa cgccaaaaac actacaaaac tggaatattt aaacttaagc
      601 aataacaatt tattgccaac caatgacatt gatcaactaa tatcatcaaa acatctttgg
      661 tatgtattag ttaacggcat caacaatgat ccacttgccc aaatgcagta ctggactgca
      721 gtaaggaata taattgatga ttctaaagaa gtaaccatcg atatatctta taatctggca
      781 atcacaaata tcgataccag tgatgaacat cttgtagaag taagcgataa ctccgaaggt
      841 aattatataa aagacaatga ctcaatgtct attcgttata gatcaaaata ttattctaaa
      901 gatttcgtct taatagaaga aacaatattt tctgacgcag aactaaaagc tattctgcct
      961 atgcgtcgca tgtacggggt tggtgactat aagtcaaatt cctcttctct accctcacac
     1021 tcggggctca aggacccaac gggcacaccc gtctgttatt atattcataa tgaggataaa
     1081 ccttccttag gttatggtcc aacatccaat aattggttaa gccaatcctt tacaacagag
     1141 ttataaaaca cattctgatt tttcaagggt gattaatcag aaaaacattg tattattacg
     1201 gagcagttat gaaattccct tcaatattta acaaaataaa accacaatcc atacagcaac
     1261 atccagaaaa aaatcaactt aactggatgc tcgaattaaa taaatggaaa gcagaacgta
     1321 cacttacagg tgaaatccat cgtccggaat gccgaaacga agccgctaaa aggataaaca
     1381 gtgctttttt gtcgaaacag aatgacattg atttatcagg acttaattta accactcaac
     1441 caccaaggct gcaaaacttc acctctatca atcttgataa taaccaactc acacattttg
     1501 atgcaaccaa ctacgataga ctcgtaaagc ttagtctgaa tagtaatgct cttgagtcaa
     1561 taaattttcc tcaaggcaga aatgtaagta ttacacatat atctatgaat aataatgctc
     1621 tcagaaatat tgatataaat aggctttcat cagttactta ttttagtgcg gcacata
//
LOCUS       DAJVTL010000302         1674 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.307, whole genome shotgun sequence.
ACCESSION   DAJVTL010000302 DAJVTL010000000
VERSION     DAJVTL010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.307"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(16..420)
                     /gene="stpA"
                     /locus_tag="OQQ26_004508"
     CDS             complement(16..420)
                     /gene="stpA"
                     /locus_tag="OQQ26_004508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HCS1859692.1"
                     /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     EQQQRELAECQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
                     NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
     gene            1056..1505
                     /gene="alaE"
                     /locus_tag="OQQ26_004509"
     CDS             1056..1505
                     /gene="alaE"
                     /locus_tag="OQQ26_004509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HCS1859693.1"
                     /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
                     RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
                     VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
     gene            complement(1542..>1674)
                     /locus_tag="OQQ26_004510"
     CDS             complement(1542..>1674)
                     /locus_tag="OQQ26_004510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2002 family protein"
                     /protein_id="HCS1859694.1"
                     /translation="CDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS"
BASE COUNT          456 a          377 c          344 g          497 t
ORIGIN      
        1 atccggcctc agtaattaga tcaggaaatc gtcgagagat ttaccttctg ccagcgcctg
       61 agcaattggc ttcggtgtac ggccctgacc ggtccaggtt ttagtttcac cgttaacatc
      121 agtgaattta tatttcgccg gacgcggctg gcgtttttta ccagcacgtg gtgcagcagc
      181 agagctatta cccaataact cttccgggtt aattccgtca gctttcatca gctccagcca
      241 ggtgctaatt ttttcctgac actcagccag ttcacgctgc tgctgttctt cttcttcacg
      301 tctttcttta gtgacaaccc tgaatttttc gagcatttct tcaagaacgt caatggagaa
      361 ttcgcgagcc atcgcacgga gggtgcgaat gttatttaaa ctttgtaaca ttacggacat
      421 aataaagaaa accttttaac gccaaaacaa aaaagtattt cgtcgcttag tgtaagcgat
      481 cacttattat atttccacaa aatttaatct atttacagtc ctgcgcgaga ttatttcagc
      541 tgttattttc tgaaactctc agaataattt caagattata tattagccat tttgatgagt
      601 aatttagatt attggtgaac agagtggcgc tctctgctcg ctaactccgc aagcctgaca
      661 aaaccgaagt gaataaaaat gcaatataac agaataaaag aaaacacccc tcactggtgc
      721 tttctgctgt aaatgacccg gtcacgacat acaccgaatt ctctacgctt atagcgttac
      781 ctcaccccca aactttcatt agtgaaatta aaggcaaggt catatctaat tgatttaatt
      841 gaaaataaat catatcagca tgtaaaaatc cacaatgtac aaaaaacgag ctgttacgga
      901 atattttatc tacaaaaact gactaaataa aaatttttta ctaattgatt attcatagcc
      961 agcgatatac gctatgcgaa aatgcagatg gcaatgagat ccactgcttt catctccatt
     1021 aacatcccat tacgctttta ttaaggagca ttagcatgtt ctcaccgcag tcacgcttgc
     1081 gtcatgcagt tgcagatacg ttcgcgatgg ttgtttactg ttctgtcgtg aacatgtgta
     1141 ttgaagtttt cctctccgga atgagcttcg aacagtcttt ttattccaga ttggtagcga
     1201 ttccggtgaa catcttaatt gcatggccat acggtatgta ccgcgatctg tttatgcgcg
     1261 cggcacgcaa agttagcccg tcgggctgga taaaaaatct ggctgatatc ctggcttatg
     1321 tgacgttcca gtcaccggtg tatgtggcga tcttgttagt ggtgggcgca gactggcatc
     1381 agattatggc ggcggtcagt tcaaacatcg ttgtttcgat gttgatgggg gcggtttatg
     1441 gctacttcct cgattattgc cgccgactgt ttaaagtcag ccgttaccag caggtaaaag
     1501 cctgactctt cttttcgcga ctggcatcgc cagtcgcgtc tttaactggc ttcgccaaat
     1561 aaaccattca aataacgttc aagcgcaaca cgcgaactaa agccatgcgg gataccgtaa
     1621 tgctcgtgtc gctcgcctgc taaatagagc ggaaattgct ggtaatgatc gcaa
//
LOCUS       DAJVTL010000303         1654 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.308, whole genome shotgun sequence.
ACCESSION   DAJVTL010000303 DAJVTL010000000
VERSION     DAJVTL010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.308"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(70..930)
                     /gene="pdxI"
                     /locus_tag="OQQ26_004511"
     CDS             complement(70..930)
                     /gene="pdxI"
                     /locus_tag="OQQ26_004511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 4-dehydrogenase"
                     /protein_id="HCS1859695.1"
                     /translation="MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLRE
                     ALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPA
                     ELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIG
                     LSNVTPTQVAEARKITEIVCVQNEYNIAHRADDAMIDVLARDGIAYVPFFPLGGFTPL
                     QSSTLSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLQLSEEV
                     LSTLDGISRE"
     gene            complement(1162..>1654)
                     /locus_tag="OQQ26_004512"
     CDS             complement(1162..>1654)
                     /locus_tag="OQQ26_004512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001123449.1"
                     /note="involved in the synthesis of a cofactor required
                     for carnitine dehydratase and carnitine racemase
                     activities; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenylacetic acid degradation protein PaaY"
                     /protein_id="HCS1859696.1"
                     /translation="GVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQDTVVEED
                     GHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVG
                     SPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREVEPDRKRLVFDENLR
                     PKH"
BASE COUNT          446 a          449 c          371 g          388 t
ORIGIN      
        1 aaacatatgc actccatgcc attaaaaaag aaacaaaagg gaaatgcatc tttccctttt
       61 gtatattcgt tattctcgcg aaataccatc caacgtagac aacacttcct cagaaagttg
      121 caatttttca gcagccatat tctcccgtaa atgcgcaaca gaagatgtcc ctgggatcag
      181 caaaatattc ggtgaacgtt gtaacagcca cgccagcgcc acctgcatgg gtgttgcccc
      241 caggctcgca gcaacatccg acagcgtaga ggattgtagc ggtgtaaagc ccccgagcgg
      301 gaagaacggc acgtaggcaa tgccgtcacg agccaaaaca tcaatcattg cgtcatcagc
      361 acgatgagca atgttgtatt cgttctgcac gcagacgatt tcggtaatct tacgcgcctc
      421 tgcaacctgc gtcggtgtga cgttgctcag gccaatatgt tttaccaggc cttgttgttg
      481 catctctgcc agcacggtca ggctggcctc aatcgatcct tccgctgggc catgaccatc
      541 ccccatcata acgcgcaggt taaccacatc cagcacgtcc agcccgagat tacgtagatt
      601 atcgtgcacc gctttttgca gctctgccgg agaaaatgcg ggcaaccagg aagcgtcctc
      661 tccacgccgc gcaccaattt tagtgacaat tgtcaggtcg tcagagtaag gataaagcgc
      721 ttcgcggata atctgattgg tgacgtgcgg accataaaag tcgctggtat caatgtgatt
      781 gacgcccaat gccagcgcct cacgcagcac agttatagcg acgtggcgat ctcttggggg
      841 gccaaaaacc ccaggacctg ccagttgcat cgcgccataa ccaagacggt taacggattt
      901 tgtaccgaga gtaaatgtat tgctgctcat cgcaccctgc cctgtaataa aacggattaa
      961 gaaaaatcag tatagaaatg aaaagagata aataatgcga aggtgtaaac aagattactg
     1021 gatgagttgc tctattgtcc tgaaagacac caaaacaaaa cgcgtaaagc gccgcatccg
     1081 gcaataaaaa aaccgaaacc tgtatcaggg ttgcggttta gggatcacat gctaaaaatt
     1141 agaatgttca gtatctggac gttagtgttt tggtcgcaga ttttcatcaa ataccagacg
     1201 ttttctgtcc ggttcaactt cccgcaatgg ctcaacttga tgcaacgtct gcttacagcg
     1261 agtcaccagc acctgatact catgcgtacc ctgctttttc catgccagct cctgctcact
     1321 gagttcacga atcgctttcg ccgggctgcc gacaatcagg taattggcag gcatttctgc
     1381 tttggctttc acaaatgcgg atgcgccaac aatgctgttc tcgccaatca ccgcgccgtc
     1441 catcactacc gcgttcattc ccactaatgc attgcggcgg ataatgcaac catgaaggat
     1501 agcgctatga ccaatatgcc catcttcttc cacgacagta tcctgttcgg gaaaaccgtg
     1561 cataacgcaa ttatcctgaa tgttcgcgcc atctttcacc acgatacgac caaaatcgcc
     1621 acgcaggctg gcatttggcc caacgtaaac gccc
//
LOCUS       DAJVTL010000304         1644 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.309, whole genome shotgun sequence.
ACCESSION   DAJVTL010000304 DAJVTL010000000
VERSION     DAJVTL010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.309"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..969
                     /locus_tag="OQQ26_004513"
     CDS             <1..969
                     /locus_tag="OQQ26_004513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HCS1859697.1"
                     /translation="SARTNNPEPSFQLINQRITHSTINDNIWASLQNAQIQALKTLDQ
                     RPAEKFAQQMYETRYADDRTKLLQENQIVQFTAADALAADRQLFSSPADITFVIVGNV
                     SEDKLVALITRYLGSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQVSQWKRYDS
                     RTPVNLATRMALDAFNVALAKDLRVNIREQASGAYSVSSRLSVDPQAKDISHLLAFTC
                     QPERHDELLTLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSL
                     IQYDDPAAWTEQEQLLKQMTVENVNTAVKQYLSHPVNTYTGVLLPK"
     gene            1331..>1644
                     /locus_tag="OQQ26_004514"
     CDS             1331..>1644
                     /locus_tag="OQQ26_004514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HCS1859698.1"
                     /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVN
                     MVA"
BASE COUNT          508 a          355 c          334 g          447 t
ORIGIN      
        1 agcgcgcgga ctaataaccc tgaacctagt tttcagttga ttaaccagcg aatcacccac
       61 agcacgatta acgacaatat ttgggcatcg ctacaaaatg ctcaaattca ggcgttgaaa
      121 acgctcgacc agcgtccagc ggagaaattc gcccagcaga tgtatgagac gcgctatgct
      181 gatgaccgca cgaaattact gcaagaaaat cagattgtac agtttactgc cgcagatgcg
      241 ctggctgccg atcgccagtt gttttcatct ccagcggata tcacgtttgt cattgtcggt
      301 aatgtctcag aagacaaact cgtggcgtta attacgcgtt acttaggatc aatcaaacac
      361 tctgattcgc cattagccgc aggtaaacca ttaactcgcg cgacggacaa cgcatcggtt
      421 actgtaaaag aacaaaatga acctgtggca caggtttcac agtggaagcg ttatgattcc
      481 cggacacctg ttaatctggc gacgcgtatg gcgctcgatg cttttaacgt cgcactggca
      541 aaagatctac gtgttaatat tcgtgaacag gcatctggag catacagcgt ttcttctcgc
      601 ctctcggttg atcctcaggc caaagatatc agtcatttgc tggcttttac ttgtcaacca
      661 gaacgacatg atgaactgtt aacgttagcg aatgaagtga tggttaagcg tctggctaaa
      721 gggatcagtg agcaagaact gaatgaatac cagcaaaacg ttcagcgcag cctcgatatc
      781 caacagcgta gcgttcaaca attagcgaac actattgtaa atagtcttat tcaatatgac
      841 gatcctgcag catggactga gcaggagcaa ttgttgaaac aaatgacggt agagaatgtt
      901 aacactgccg ttaaacaata tctttctcat ccggtaaata cttataccgg agtattattg
      961 ccaaaataat aacagccccg tcaacacatc gttggcgggg attttagcaa tattcgctat
     1021 ttttatgtaa taattttaca aatgcgttca aaataataat caagtactaa tattgatatt
     1081 ttaaggtctg atttttacgt gatgattcag gagacacaga atgcgtataa aaataacagc
     1141 ataaaacacc ttgccaccac ccaagaattt catattgtat tgtttttcaa tgaaaaaata
     1201 ttattcgcgt aatgtctcac gataaataac attaggattt tgttatttaa acacgagtcc
     1261 tttgcacttg cttactttat cgataaatcc tactttttta atgcaatcca atcattttaa
     1321 ggagtttaaa atggataaga agcaagtaac ggatttaagg tcggaactac tcgattcacg
     1381 ttttggtgcg aagtctattt ccactatcgc agaatcaaaa cgttttccgc tgcacgaaat
     1441 gcgcgacgat gtcgcattcc agattatcaa tgacgaatta tatcttgatg gcaacgctcg
     1501 tcagaacctg gccactttct gccagacctg ggacgacgaa aatgtccaca aattgatgga
     1561 tttatccatt aacaaaaact ggatcgacaa agaagaatat ccgcaatccg cagccatcga
     1621 cctgcgttgc gtaaatatgg ttgc
//
LOCUS       DAJVTL010000305         1626 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.310, whole genome shotgun sequence.
ACCESSION   DAJVTL010000305 DAJVTL010000000
VERSION     DAJVTL010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.310"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..191
                     /locus_tag="OQQ26_004515"
     CDS             <1..191
                     /locus_tag="OQQ26_004515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1859699.1"
                     /translation="QAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDL
                     FAKAKLNGIPSIAWPEKK"
     gene            396..1127
                     /gene="bluR"
                     /locus_tag="OQQ26_004516"
     CDS             396..1127
                     /gene="bluR"
                     /locus_tag="OQQ26_004516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor BluR"
                     /protein_id="HCS1859700.1"
                     /translation="MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDE
                     EDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRA
                     RIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAAASLFEMRRK
                     PGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGM
                     APTRRQNELLQHWGEQGYKVIFHAP"
     gene            1348..>1626
                     /locus_tag="OQQ26_004517"
     CDS             1348..>1626
                     /locus_tag="OQQ26_004517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HCS1859701.1"
                     /translation="MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNI
                     RIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCS"
BASE COUNT          484 a          340 c          359 g          443 t
ORIGIN      
        1 ggcaggcaat tattcaagcg atcataaaat gctgtacatc acttgaaatt caagtcagtg
       61 ctatgggcgt ggcaacacca gaagagtgga tgtggcttga atccgcagga attgagatgt
      121 ttcagggaga tctgtttgct aaagctaaat tgaatggtat cccttccata gcgtggccag
      181 agaaaaaata attttcagca cattctttca catgatttca gtaaatcatc gtgaaaatga
      241 atacgttatg tttaaattta atccacatta aatataatgt ttcatccaat ttagctgaaa
      301 ccttatttat actttgtaca attttagcgt atattgtaca aagtattatt gggtcgtgta
      361 caggcgacgg agatttatga ccgcaaggag gaattgtggc ttattacagc attggtgatg
      421 ttgctgaacg ttgcgggatt aatcctgtca ctctccgggc ctggcaacgc cgctacggtt
      481 tgttaaaacc acagcgcagt gaaggcggac accgactctt tgatgaagaa gacatacaac
      541 gtatcgaaga gatcaagcgt tggataagta atggcgtccc tgtaggcaaa gttaaagcat
      601 tactggaaac caccagccag gatacggaag atgactggag ccgcttgcaa gaagagatga
      661 tgtcaattct tcgtatggct aatcctgcca aactacgcgc gagaattatt tcactgggtc
      721 gagagtaccc agtagatcaa ttgattaatc atgtttacct tcctgttcgc cagcgtctcg
      781 tgcttgatca caacacctcc cgcattatga gcagtatgtt tgacggcgca ttaattgaat
      841 acgcagcagc ctcgcttttc gaaatgcgcc gtaagcccgg taaagaagcc attctgatgg
      901 cgtggaatgt tgaagagaga gcacgattgt ggctggaagc atggcgttta tcattgtcag
      961 gatggcacat ttctgttctt gctgatccca ttgaatcgcc acgcccggaa ctgttcccga
     1021 cgcaaacatt gattgtctgg acaggcatgg caccaacgag aaggcaaaac gaacttttac
     1081 aacattgggg tgagcaaggt tataaagtca tctttcatgc cccctaattt cacctttatc
     1141 ccgcccctta gacagaatgt tataatctga acccacaaca gcgtttgtac cggagctggt
     1201 ccgttgcaaa atgctcaccg ggagaattca gatattccct ctatcacact ctgtacatat
     1261 cacagccaaa ggacagacca gattgaagtg gtaaaaccga tcgtgcacac tacgcagtct
     1321 cacaactaac aagaggttat tatcctgatg gatcaggtcg ttgtttttca aaagatgttt
     1381 gagcaagtga gaaaagagca aaacttctcc tggttttatt cagaattaaa acatcaccgt
     1441 attgcacatt acatttatta tctggctacg gataacatca gaattattac tcacgatgat
     1501 acggttttgt tattaagagg aaccaggaac ctgttaaaag ttagtacgac caagaaccct
     1561 gctaaaataa aagaggccgc attgcttcat atttgcggaa aatctacatt tcgggaatac
     1621 tgttca
//
LOCUS       DAJVTL010000306         1616 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.311, whole genome shotgun sequence.
ACCESSION   DAJVTL010000306 DAJVTL010000000
VERSION     DAJVTL010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.311"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            47..166
                     /locus_tag="OQQ26_004518"
                     /pseudo
     CDS             47..166
                     /locus_tag="OQQ26_004518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000544830.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            587..1165
                     /locus_tag="OQQ26_004519"
     CDS             587..1165
                     /locus_tag="OQQ26_004519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859702.1"
                     /translation="MKVSFKSLGYIFHDIYNKKHTIDEFNDVVRKAVLSGKINELNAC
                     HKVAIFLAEKDNEITKKDKAKIIDTLTENYSIEFQQLMNISERTLNSSLYITPGESGF
                     VSFVNREGKICHTAYVKSSDNSMVYYHANYSSIDKYITDMCGLICMRHIESTGIIFYM
                     LDEKVLSAIAEFMNEKGWRAAFCSAKNLYKCV"
     gene            complement(1274..1532)
                     /locus_tag="OQQ26_004520"
                     /pseudo
     CDS             complement(1274..1532)
                     /locus_tag="OQQ26_004520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          530 a          274 c          368 g          444 t
ORIGIN      
        1 caaaagtgta gcggtattaa gcgcagctat ttagatcggc tgctacacgc tgaatatcaa
       61 aggagagagt taccggttaa aagagaaacg taaagctgga gtgctgacca aaaacacaac
      121 gccaatcagt gatgatgaaa tggtggaaaa cggacagcat cagtaacgaa agtatcttag
      181 caggcatgaa aatcgtccgc atcccctaaa cggtcaaaat gcttctgccg tgaaggaggg
      241 agaatgccat ctcatcactt atatctggcg aatgaaacac agatggtcgg ccttgccccc
      301 aaacacacgg cggtgcaaaa tggaatggca gaaaacttcg tcaaaacgat gaaatatgat
      361 taaatcagtg ttatgttcga acctgacgtg ttaacagcag taaagtagtc tcgcgaaggt
      421 gttcaaacat tataatgaat ggcatcctca tagtgcgcag ggttatcgct tgctgcggaa
      481 atatctgaag cgacgtacca gtaatgggga aaatgatagc tggtttctga aaatatagag
      541 gaaaatgtga tatatatatc ctgttaatat ttaaggagaa tataaaatga aagtctcgtt
      601 taagtcttta ggctatattt ttcatgatat atataataaa aaacacacta tcgatgagtt
      661 caacgatgtg gtaagaaaag cagttttatc aggtaaaatt aacgagctga atgcatgtca
      721 taaagtggca atttttcttg ccgaaaaaga caatgagata acaaagaaag acaaagccaa
      781 gataatagat acattaactg aaaactattc cattgaattt caacaattaa tgaatattag
      841 tgagcgcacg ttaaattcat ctttatatat tactcctggt gaaagtggtt ttgtcagttt
      901 tgtgaatcgt gaaggaaaaa tatgtcatac tgcatatgta aaatcatcag ataatagcat
      961 ggtatattac catgcaaatt atagcagcat tgacaaatat attacggata tgtgcggcct
     1021 tatttgtatg aggcatattg agtctactgg cattattttt tatatgcttg atgaaaaagt
     1081 tttatctgcc attgctgaat ttatgaatga aaaaggatgg cgggctgcgt tttgttcagc
     1141 aaagaactta tataaatgtg tttaatttta gaaaaactat ttggtaaaat ccaacaagag
     1201 tcgagaggtt cgcgttgctt cagcagggcc tcagcctgtt caaccagact cagttgcagg
     1261 tcgtgacgca gatttagtgg tggtggttga ttgtcagata ccagccgatg atcttgtagt
     1321 gcatatcatc agactttgag aagcatatgg ttttgcgggt aagccgctta agatgtgtcc
     1381 gcaggttcag attatgtcgc tctatccgct gagtgcattt cttgcttata acatgactgg
     1441 ttgaggacaa taaagttcgg tataccggct caggcatcgg tcatgtagaa ggcaatgcta
     1501 aactggctca gcaaactaag agcagcgcgc atccacttac ccaatgcggt tgagaaaata
     1561 gccttcgatc gctttcatgt ggcgaaacaa ccgggtgagg tggtggataa aacccg
//
LOCUS       DAJVTL010000307         1592 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.312, whole genome shotgun sequence.
ACCESSION   DAJVTL010000307 DAJVTL010000000
VERSION     DAJVTL010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.312"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>1592
                     /locus_tag="OQQ26_004521"
     CDS             <1..>1592
                     /locus_tag="OQQ26_004521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000123470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HCS1859703.1"
                     /translation="MPPHYDALTTDKDRRNEPDTELLPGAILRLTCAEWWKRKLWLLR
                     CEWREEQLRAACLVSRKTSPYLSQDALSEFRAQREKTRDFLKSFMLENEDGFTIDLET
                     VYYAGVSNPVHRKAEMMATMKGLELLAEARGDKAVFLTVTCPSKYHATTENSHPNPKW
                     NGATMRDSSDYLVNTFFAAVRKKLNRDGLRWYGIRTVEPHHDGTVHWHMMVFAHPEEI
                     DTIVSHTRDIAIQEDRHELGDDITPRFKAEYVDGSKGTPTSYIATYIGKNLDSRAVDG
                     IDPKTGKPRVDHETGKSMAESVERAIGWARLHRVRQFQFFGIPSRQVWRELRRLASQI
                     ARNPEGPQRLKDDAMDAVLAAADAGCFATYIEKQGGVLVPRKDYLIRTAYDLADELND
                     YGEQSVQIYGIWSPFIGESSRVCTHPDNWKLVRRKPEAEDSTRENGFDLQGGPAAPWT
                     RGNNCPRVQETDNNGTEQPKERPAPWPQLPDGVEVNEWMRSLKRHERRALMRSLRDKQ
                     AKNSSDEMQSWTQSRKQQRPLP"
BASE COUNT          406 a          456 c          451 g          279 t
ORIGIN      
        1 atgcctccac attatgacgc actgacaaca gacaaagacc ggaggaacga accggacacg
       61 gagctgctgc cgggcgcaat ccttcgcctg acctgtgcgg aatggtggaa acgcaaactg
      121 tggctgttac gttgcgagtg gagagaagaa caactccgcg ccgcctgtct ggtttccaga
      181 aaaacatcac cctatctgag ccaggacgcg ttaagcgagt ttcgcgcaca gcgcgagaaa
      241 acacgcgatt tcctgaaaag tttcatgctg gaaaacgaag acgggttcac gattgatctc
      301 gagacagtgt attacgcggg agtaagtaac ccggttcacc gtaaggcaga aatgatggcc
      361 accatgaagg ggctggaact tctggccgaa gcccgtggcg acaaagcggt gtttctgact
      421 gtcacctgcc cgtcaaaata ccacgccaca acagagaaca gtcatccgaa tcccaaatgg
      481 aacggggcca ccatgcgcga ctccagcgat tacctggtta acacgttttt tgcagcggtc
      541 cgcaagaaac tgaaccgcga cggcctgcgc tggtatggca tccgcacggt ggagcctcac
      601 catgacggca ccgtgcactg gcatatgatg gtctttgctc atccggaaga aatcgacacc
      661 attgtgtccc acacccgcga tattgccatt caggaagatc gtcacgagct gggtgatgat
      721 attaccccac gctttaaggc ggagtacgtc gacggctcaa aaggcacgcc aaccagctac
      781 atcgccacct acatcggaaa gaacctggac agccgcgccg tggatggcat cgacccgaaa
      841 acgggcaagc cacgcgttga ccacgaaaca ggtaaatcaa tggccgagag cgtggagcgc
      901 gccatcggct gggcgcgcct tcaccgggtc cgccagttcc agttctttgg catcccctcc
      961 cgtcaggtgt ggcgtgaact ccgccgcctt gccagccaga tagcacgcaa cccagaaggc
     1021 ccgcaacggc tgaaggatga cgcaatggat gcggttcttg ctgccgctga tgccgggtgt
     1081 tttgccacct acattgaaaa acagggtggc gtacttgttc cgcgcaagga ctacctgatt
     1141 cgcacagcct acgacctcgc agatgagctg aacgattacg gcgaacagag tgtacagatt
     1201 tacgggatct ggtcgccatt catcggggaa tcctcccgtg tgtgcacgca tccggataac
     1261 tggaagctgg taagacgtaa accggaagcg gaggacagca cccgcgaaaa tggttttgac
     1321 cttcagggcg gccctgccgc cccttggact cgtggcaata actgtccccg tgtacaggaa
     1381 acggacaaca acgggacaga acagccgaaa gaacggccag caccgtggcc gcagctccct
     1441 gacggcgttg aagtgaacga atggatgcgc tcactgaaac ggcacgaacg ccgggcgctg
     1501 atgcgttcgc ttcgtgacaa acaggcaaaa aacagcagtg atgaaatgca gagctggaca
     1561 cagagccgca aacagcagcg gcctttgcct ga
//
LOCUS       DAJVTL010000308         1575 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.313, whole genome shotgun sequence.
ACCESSION   DAJVTL010000308 DAJVTL010000000
VERSION     DAJVTL010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.313"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            188..706
                     /locus_tag="OQQ26_004522"
     CDS             188..706
                     /locus_tag="OQQ26_004522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="s domain protein"
                     /protein_id="HCS1859704.1"
                     /translation="MYEVYNNGYPTAYGNVLHLKGAAASGEGELLIGWSGTSGAHAPV
                     YIRSRRDTTDAVWSEWAQVFTSKDSFNAASATKLQTPRKINGTAFDGTRDITISSTDS
                     GAVRDFRYTSEVFHNPGGNEISWVFRAPSGCILSGINVQETGKSSADNIGGVYYKQTQ
                     IYINGGWRTVSG"
     gene            721..1251
                     /locus_tag="OQQ26_004523"
     CDS             721..1251
                     /locus_tag="OQQ26_004523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000423349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HCS1859705.1"
                     /translation="MELRNVTRYYPEEMPYGENIQYFRSEDGQDFYESLDKFTKKYKL
                     CIHPETGVIYSMAEDVSRLYPVGFTIVEVDELPEGFDIEANWYYRDGEVLPVPVDYSK
                     LAEKQRQRLLNEAKEITSDWKTKLELGTISDDDKVRLTQWMEYIKAVKVLDLSTATDE
                     ISFDAINWPERPDAAA"
     gene            1238..>1575
                     /locus_tag="OQQ26_004524"
     CDS             1238..>1575
                     /locus_tag="OQQ26_004524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prophage tail fiber N-terminal domain-containing
                     protein"
                     /protein_id="HCS1859706.1"
                     /translation="MPQLKGVIKTPTGEPLGGATITLTSLHNRAGILKGVFSHVTTQS
                     GEYDFPVLPGVYSVRLTQSAQRLSEIGVIRVYEDSADGSLNDFLGATDIDLRPESLKK
                     FEELAQQAQQ"
BASE COUNT          438 a          371 c          405 g          361 t
ORIGIN      
        1 attcccttat tttaccggca aagacacaat ggcattaaca ccgctcagtg cgtttgtgcg
       61 cagtattctc gggaaaaaca gcgccagtga atttattaaa gcaatcggcc tgtcaccaga
      121 catcctttta tcaaaaggac cggtgacagc attaagcagt acagcacagg gcaatgcagg
      181 acttcagatg tatgaagtgt acaacaacgg ctatcccaca gcttatggca atgttctgca
      241 tctgaaaggc gcggcagcat ctggcgaagg cgaactgctg attggctgga gtggcacgag
      301 cggtgcacat gctccggttt atattcgctc aaggcgtgat accaccgatg cagtctggtc
      361 tgaatgggca caggtgttta catcaaaaga cagcttcaac gcagcatccg ccacaaaact
      421 acagacccca cgcaaaatta acggtacggc atttgatggc accagagata tcaccatcag
      481 cagcaccgat tctggtgcag tacgtgattt cagatacacc agcgaagtgt ttcacaatcc
      541 cggtggtaac gaaatttcct gggtattccg cgcgccttca gggtgtattt tgtcaggtat
      601 taacgttcag gaaactggca aaagctctgc ggataacatc gggggtgtgt attacaaaca
      661 aactcagatt tatatcaatg gcggatggcg cacggtatcc ggctaattaa ggagaaaata
      721 atggaactca gaaacgtcac gcgttattac ccggaagaaa tgccttatgg tgaaaacatt
      781 cagtatttcc gcagtgaaga cggacaggat ttttatgaat cactggataa attcacgaag
      841 aaatacaaat tatgtattca cccggaaacc ggcgtgattt attcaatggc agaagacgtg
      901 tctcgtcttt atcctgttgg ttttaccatt gtggaagtgg atgagctgcc ggagggtttt
      961 gacatcgaag ccaactggta ttaccgggat ggcgaagtac tgccagttcc tgttgattat
     1021 tcgaaactgg cagaaaagca acgtcagcgc ttgctgaatg aagcaaagga aatcacttcc
     1081 gactggaaaa ccaagctgga gctgggcacc atcagcgacg atgacaaagt ccgtcttacg
     1141 cagtggatgg aatatatcaa agcggtgaag gtgctggatt taagcactgc taccgatgaa
     1201 atctcctttg atgccatcaa ctggccggag cgtcccgatg ccgcagctta aaggtgtgat
     1261 taaaacgccc acgggagaac cgctgggcgg cgcaaccatt acactgacct ccctgcacaa
     1321 ccgtgcaggg attctgaaag gcgttttcag ccacgtcacc acacagagcg gggagtatga
     1381 cttccccgtt ctgccgggcg tgtacagcgt tcgcctgaca cagagcgcac aacgcctttc
     1441 agaaatcggt gtcattcgcg tttatgaaga ttcagcggac ggttcgctga atgattttct
     1501 gggcgcaact gatattgacc tgcgtccgga atccctgaag aaattcgaag agctggcgca
     1561 acaggcgcag cagag
//
LOCUS       DAJVTL010000309         1505 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.316, whole genome shotgun sequence.
ACCESSION   DAJVTL010000309 DAJVTL010000000
VERSION     DAJVTL010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.316"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            14..391
                     /locus_tag="OQQ26_004525"
     CDS             14..391
                     /locus_tag="OQQ26_004525"
                     /inference="COORDINATES: protein motif:HMM:NF012565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCS1859707.1"
                     /translation="MRYLNTKNLIAAGVLLACMSSIAWGTIIPDRTRIIMNESDKGEA
                     LKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQEKIAQL
                     PNDRETLFYFNVREIPPKTDKKM"
     gene            391..762
                     /locus_tag="OQQ26_004526"
     CDS             391..762
                     /locus_tag="OQQ26_004526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002431285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HCS1859708.1"
                     /translation="MQVTMQHALKLFWRPKAIELEDDGVMSYEKVEIIRRNDGSIRFN
                     NKMPYHVTLGYIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSF
                     YEINCPTVNNSCNVSVAKRNK"
     gene            764..>1505
                     /locus_tag="OQQ26_004527"
     CDS             764..>1505
                     /locus_tag="OQQ26_004527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859709.1"
                     /translation="MRYLLIVIIFIIGFSALPVWAMDCYAEHEGGNTVVIGYVPRISI
                     PSNGKKGDKIWQSSEYFMNVFCNNALPAPSPGEEYPSAWTNIMMFLPGGQDFYNQNSY
                     IFGVTYNGVDYDSTAPNAIAAPECIDIKGAGTFNNHYKKPAVCSGGPEPQLSVTFPAR
                     VQLYIKLAKNANRVNKNLVLPDEYIALEFKGMSGAGAIEVDKNLTFRIRGLNNIHVLD
                     CFVNVALEPADGVVDFGKINSRTIKNTSV"
BASE COUNT          506 a          280 c          298 g          421 t
ORIGIN      
        1 caggatgaaa ctaatgcgct acttaaacac aaagaatctc attgcagcag gagtattact
       61 cgcctgcatg agcagcattg cctggggtac catcatcccg gaccgtaccc gtatcataat
      121 gaatgagtca gataaagggg aagcattaaa acttactaat caaagcaaaa atctacccta
      181 tctggcgcaa acatggatag aagatacgaa aggcaataaa tcacgtgact ttattgtcac
      241 ggttccccct atggtacgtt taaatcccag tgagcaaatt caaataagaa tgataagtca
      301 ggaaaaaatt gctcaactgc ctaatgacag agaaacgctc ttctatttta acgtgcgaga
      361 aataccgcca aaaacagata aaaaaatgtg atgcaagtca ctatgcagca cgcattgaaa
      421 ctattctggc gaccaaaagc tattgaatta gaagatgatg gggtaatgtc ttacgaaaaa
      481 gttgaaatca tccgtagaaa tgatggttcg atccgcttta acaataagat gccttatcac
      541 gttacgctgg gttatatcgg aacaaacgga atcacaatgt tgccacaaac gcaaagttta
      601 atggtaaccc cttatagcca tgcagatacg cagtttaaaa atgttccgtc agcttttcag
      661 gttggttata tcaatgattt tggtggatta agtttttatg aaataaactg cccgacggtt
      721 aataactctt gtaatgtttc cgtagccaaa cgaaataaat aatatgcgct acttattaat
      781 tgtaattata tttattatag gttttagtgc attacctgta tgggcaatgg actgctatgc
      841 tgaacatgaa gggggaaata ccgtagtcat tggttacgta ccaagaattt ctatccccag
      901 taatggtaaa aaaggtgata agatctggca aagcagtgag tattttatga atgtcttctg
      961 taataatgca ttacctgccc catcacctgg agaagaatac ccatcagcct ggactaatat
     1021 aatgatgttt ttaccaggcg gtcaggactt ttataatcag aactcctata tttttggcgt
     1081 aacatacaat ggagttgatt atgattcgac tgcccctaat gctatcgcag caccagaatg
     1141 cattgatata aaaggagcgg gtacctttaa taatcactat aaaaaacccg ctgtctgtag
     1201 tggaggtcct gagcctcaat tatcagtaac ctttccagct cgcgtacaac tctatattaa
     1261 attagcaaaa aatgccaata gagttaataa aaacctggtg ttacctgatg aatatatcgc
     1321 tctagagttt aaaggtatga gtggcgcagg agctatagaa gtagacaaaa atttgacctt
     1381 caggattcgt ggattaaata atattcatgt ccttgactgc tttgttaatg tcgcactgga
     1441 accagctgat ggagttgttg actttggtaa aataaattcc cgaacaatta aaaataccag
     1501 cgtta
//
LOCUS       DAJVTL010000310         1492 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.318, whole genome shotgun sequence.
ACCESSION   DAJVTL010000310 DAJVTL010000000
VERSION     DAJVTL010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1492
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.318"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..1432)
                     /gene="xylG"
                     /locus_tag="OQQ26_004528"
     CDS             complement(<1..1432)
                     /gene="xylG"
                     /locus_tag="OQQ26_004528"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HCS1859710.1"
                     /translation="MPYLLEMKNITKTFGSVKAIDNVSLRLNAGEIVSLCGENGSGKS
                     TLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENI
                     FLGNEITHNGIIDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDG
                     QHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKR
                     VNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQA
                     IAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQL
                     KVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQ
                     LVQQGIAVIVISSELPEVLGLSDRVLV"
BASE COUNT          383 a          373 c          337 g          399 t
ORIGIN      
        1 tcaccagtac acgatcgcta aggccgagca cttcaggtaa ttcggaagag atgacaataa
       61 cggcaatacc ctgctggacg agttggttaa ttaatttgta gatctcatat ttcgcgccaa
      121 tatcaatacc cctggtaggt tcatcaagaa tgaggatgcg cgggttaagt aacagacagc
      181 gggcgaggat cgctttttgc tgattgccgc cgctcaaacg tccaatagca aggtcggggg
      241 acgacgtttt aactttgagt tgctggattg attccagaat acatttttgc tctgccgcgt
      301 catcaagctg gctaatgcca ccggtaaatt tattgagtgc ggcgagggta atatttttac
      361 caaccgccat taccggaacg atgccgtcgc gctttctgtc ttcgggtacc atcgcaatcc
      421 cctgggcgat ggcttgctga cagttacgaa tatctacctg tttgccatca atataaattt
      481 ttccttccca ttgtccgggc cacacgccaa acaggcactg aatggtctcg gtacgtccgg
      541 caccaacgag tccggcaata cccagtattt cgccacgttt cagggaaaac gagacatcat
      601 taactcgttt aatatgacga ttaaccggat gccatgccgt cagatgttca atacgtaata
      661 tttcatctcc ggtggtatgt ggttcattag ggtaaagcgc ggttaactct cgcccgacca
      721 tcatggtgat aatatcgtct tcactcattc cggcagcatc acgcgtacca atgtgctgac
      781 cgtcgcgaat aacgcaaatc gtatcggaaa tcgctttgac ttcgttgagt ttgtgcgaaa
      841 tataaataca ggcgataccg tgctgttgta gatcgcgaat aatatccagt aaaaccgacg
      901 tttcctgctc agttaatgag gctgtcggtt catcgagaat taacaagcgc acctgtttat
      961 taagtgcctt ggcaatttca accagttgtt gttgcccaag ccctaaatcg ccaacgcggg
     1021 tatcaggtga aatggataaa ctgacctgtg cgagcagctt ctgacagcgt agcgtcatca
     1081 ggtcataatc aataatgcca ttgtgggtta tttcgttacc caggaagata ttttccagca
     1141 cggtcaattc tttcaccaag gccaattcct ggtgaatgat ggcgatacct ttgcgttcgg
     1201 tatcgcggat gtgactcgcc tgaatctctt ctcccgcaaa aataatttcg ccttcgtagg
     1261 agccatgggg ataaatacca cacagcactt tcatcagcgt tgatttacca gacccatttt
     1321 ccccacagag tgagacgatt tcgccagcat tcaaccgcaa gctgacgtta tcaatcgcct
     1381 tcacactgcc gaaggttttg gtaatgttct tcatttcaag tagataaggc ataacgactc
     1441 cacctaagcc aattcattca cgcggcatgg agagaaatca cgcccccgct cc
//
LOCUS       DAJVTL010000311         1463 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.319, whole genome shotgun sequence.
ACCESSION   DAJVTL010000311 DAJVTL010000000
VERSION     DAJVTL010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.319"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..321
                     /locus_tag="OQQ26_004529"
     CDS             <1..321
                     /locus_tag="OQQ26_004529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="response regulator in two-component regulatory
                     system with EvgS; phosphorylated EvgA activates ompC,
                     emrKY, gadABC, hdeAB and others genes; involved in acid
                     resistance, osmotic adaption, and drug resistance; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HCS1859711.1"
                     /translation="FVSKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLD
                     SLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQR
                     NKIG"
     gene            326..>1463
                     /gene="evgS"
                     /locus_tag="OQQ26_004530"
     CDS             326..>1463
                     /gene="evgS"
                     /locus_tag="OQQ26_004530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HCS1859712.1"
                     /translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
                     SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQQVRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLT
                     SPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVVLNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLNPGGWDILPGAIYSEDRENNV"
BASE COUNT          465 a          311 c          267 g          420 t
ORIGIN      
        1 ttcgtgagta aaaaagaagg catgaacaat atcattgcgg ctattgaagc tgcaaaaaat
       61 ggctactgct atttcccctt ctctctcaac cggtttgttg gaagtttaac gtccgaccag
      121 caaaaactcg actccttatc gaaacaagaa attagtgtca tgcggtatat tcttgatggc
      181 aaggataata atgacattgc ggaaaaaatg ttcatcagca acaaaactgt cagcacgtat
      241 aaaagtcgcc tgatggaaaa attagaatgt aaatcactga tggatcttta cacattcgcg
      301 caacgtaaca aaatcggcta atcacatgaa gtttttaccc tatttttttc ttctctgttg
      361 tggtctttgg tcgaccataa gtttcgcaga cgaagattac atcgaatatc gtggcatcag
      421 tagtaacaac cgtgtcacac ttgatccagt acgtctgagc aacaaggaat tacgttggtt
      481 agcgagcaaa aaaaatcttg tgattgcagt acacaagtcc caaacggcta ccttgttgca
      541 taccgattcg cagcaacagg ttcgtggtat taatgctgat tatttaaatc ttttaaaaag
      601 agcgttaaat attaaattaa cactccggga atacgcagat catcaaaaag caatggacgc
      661 gcttgcagaa ggtgaagtcg atatagtgtt atcacattta gttacttcgc cacctcttaa
      721 taatgacatt gctgcaacca aaccattgat aattaccttt ccggcgctgg taaccaccct
      781 tcacgactca atgcgaccgc ttacctcacc aaaaccagta aatattgctc gggtcgcaaa
      841 ttacccccca gacgaggtaa ttcatcaatc atttccaaaa gcaacaatta tctcttttac
      901 aaatttatat caggcattag catccgtctc agccggacag aatgattact ttattggtag
      961 taacatcatt accagcagta tgatttcccg ctatttcact cactccttaa atgtagtgaa
     1021 atattataac tcaccgcgtc aatataactt cttcttaacc agaaaagaat ctgtcgttct
     1081 taatgaagta ctcaatcgat ttgttgatgc tttgacaaat gaagttcgct atgaagtatc
     1141 acaaaattgg cttgatacag gaaacctggc ctttctgaac aaaccattag aactcactga
     1201 acatgaaaaa cagtggatta agcagcatcc cgatttaaag gtgctggaaa atccttactc
     1261 ccctccctat tctatgacgg atgaaaatgg ctcggttcgg ggcgttatgg gggatattct
     1321 taatattatt accttgcaaa caggtttaaa tttttctccg atcaccgttt cacacaatat
     1381 ccatgctgga acacagctga atcccggcgg atgggatata ttacccggtg ctatttatag
     1441 tgaagataga gaaaataatg ttt
//
LOCUS       DAJVTL010000312         1462 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.320, whole genome shotgun sequence.
ACCESSION   DAJVTL010000312 DAJVTL010000000
VERSION     DAJVTL010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.320"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..321
                     /locus_tag="OQQ26_004531"
     CDS             <1..321
                     /locus_tag="OQQ26_004531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="response regulator in two-component regulatory
                     system with EvgS; phosphorylated EvgA activates ompC,
                     emrKY, gadABC, hdeAB and others genes; involved in acid
                     resistance, osmotic adaption, and drug resistance; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HCS1859713.1"
                     /translation="FVSKKEGMNNIIAAIEAAKNGYCYFSFSLNRFVGSLTSDQQKLD
                     SLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQR
                     NKIG"
     gene            499..>1462
                     /gene="evgS"
                     /locus_tag="OQQ26_004532"
     CDS             499..>1462
                     /gene="evgS"
                     /locus_tag="OQQ26_004532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000562284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HCS1859714.1"
                     /translation="MIAVHKSQTATLLHTDSQQRIRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALEDGEVDIVLSHLVASPPLNDDIAATNPLIITFPALVTTLHDSMRPLT
                     SSKPVNIARVANYPPDKVIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFLLTRKDSIVLNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWVKQHPDLKVLENPYSPPYSMTDETGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLNPGGWDILPAAIYSEDRENNV"
BASE COUNT          461 a          306 c          265 g          430 t
ORIGIN      
        1 ttcgtgagta aaaaagaagg catgaacaat atcattgcgg ctattgaagc tgcaaaaaat
       61 ggctactgct atttctcttt ctctctcaac cggtttgttg gaagtttaac gtccgaccag
      121 caaaaactcg attccttatc gaaacaagaa attagtgtca tgcggtatat tcttgatggc
      181 aaggataata atgacattgc tgaaaaaatg ttcatcagca acaaaactgt cagcacttat
      241 aaaagtcgct tgatggaaaa attagaatgc aaatcactga tggatcttta cacattcgca
      301 caacgtaaca aaatcggcta accacatgaa gtttttaccc tatatttttc ttctctgttg
      361 tggtctttgg tcgaccataa gtttcgcaga cggagattac atcgaatatc gtggcatcag
      421 tagtaacaac cgtgtcacac ttgatccact acgtctgagc aacaaggaat tacgttggct
      481 cgcgagcaaa aaaatcttgt gattgcagta cacaagtccc aaacagctac gttgttgcat
      541 accgattcgc agcaacggat tcgtggtatt aatgctgatt atttaaatct tttaaaaaga
      601 gcgttaaata tcaaattaac actccgggaa tacgcagatc atcaaaaagc aatggacgcg
      661 ctggaagacg gtgaagttga tatagtgtta tcacatttag ttgcttcgcc gcctcttaat
      721 gatgacattg ctgcaactaa tcctctgata attacctttc cggcgctggt cactaccctt
      781 cacgattcaa tgcgaccgct tacctcatca aaaccagtaa atattgctcg agtagcaaat
      841 tatcccccag acaaggtaat tcatcaatca tttccaaaag caacaattat ctcttttaca
      901 aatttatatc aggcattagc atccgtctca gccggacaga atgattactt tattggtagt
      961 aacatcatta ccagtagtat gatttcccgt tattttactc actccttaaa tgtagtgaag
     1021 tattataact caccgcgtca atataacttt ttattaacca gaaaagattc aatcgttctt
     1081 aatgaagtac tcaatcgatt tgttgatgct ttaacaaatg aagttcgcta tgaagtatca
     1141 caaaattggc ttgatacagg aaacctggcc tttctgaaca aaccattaga actcactgaa
     1201 cacgaaaaac agtgggttaa gcagcatccc gatttaaagg tgctggaaaa tccttactcg
     1261 cccccctatt ctatgacaga tgaaactggc tcagttcggg gcgtgatggg tgatattctt
     1321 aatattatta ccttgcaaac aggtttaaat ttttctccga tcaccgtttc acacaatatt
     1381 catgctggga cacagcttaa ccccggtgga tgggatatat tgcccgccgc tatttatagt
     1441 gaagatcgag aaaataatgt tt
//
LOCUS       DAJVTL010000313         1457 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.321, whole genome shotgun sequence.
ACCESSION   DAJVTL010000313 DAJVTL010000000
VERSION     DAJVTL010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.321"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..534
                     /locus_tag="OQQ26_004533"
                     /pseudo
     CDS             1..534
                     /locus_tag="OQQ26_004533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            901..1457
                     /gene="ospC4"
                     /locus_tag="OQQ26_004534"
                     /pseudo
     CDS             901..1457
                     /gene="ospC4"
                     /locus_tag="OQQ26_004534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC4"
BASE COUNT          472 a          311 c          266 g          408 t
ORIGIN      
        1 cagttgtcca ggccttccga aatcaaccga ctgaaggcgc tggtcgcgaa actgcagcgt
       61 atgcagttcg gtaaaagctc agaaaaactt cgcgcaaaaa ccgaacggcg gatacaggaa
      121 gcacaggagc gaatcagcgc acttcaggag gaaatggcgg aaacactggg tgagcaatat
      181 gacccggtac tgccatcttc cctgcgccag tcttcagccc gtaaaccgtt accagcctca
      241 cttccccgtg ccccccgggt catccggccg gaagaggaat gctgtccggc ctgtggtggt
      301 gaactcagtc cactgggatg tgatgtgtca gagcagctgg agcttatcag cagcgccttt
      361 aaggttatcg aaaaacaacg ccctaaactg gcctgtcgcc ggtgcgacca tatcgtgcag
      421 gcaccggtgc cttcaaaacc cattgcacgc agttatgccg gagcggggct tctggcccat
      481 gttgttaccg gaaagtatgc agaccatctg ccattatacc gccaaagtga tctactattc
      541 cacacagcta tttagctctc tttttgttga gctcccatga ttctttcatt tattgttact
      601 aattatttta tgttatcatg atgttagaac acgctctgct ctgtgtctct attttatcta
      661 tcatattctg aggattaact acataacaag gcgcaagata tatatccaaa aacaaataat
      721 accgttgcaa taattccttt cagtaaagga ggtgtgatta atttcagggg atttcagagt
      781 gaaaattata caacatatta aaatatgttc atttcgttat aatacacaca agaaaatatt
      841 aagttagata atatattcta aataaccata gataaaaacg cacataatgg ggaatatttt
      901 atgaaaatac ctgaaacagt aaatcatatt aatgttcaga ataatattga tcttgttgat
      961 ggaaaaacga atccgaataa agcaacaaaa gcattacaaa aaatatatta cgcgtaacaa
     1021 actcatcttc ttctggcata agtgaaaaac atttagatca ctgtgctaat actgtgaaaa
     1081 actttttaag gaagtctata gcagcgcaaa gttatagcaa aatgttttct caagggacca
     1141 gtttcaaatc actaaatctt tctattgaag cgccatctgg agcacggtca tcatttcggt
     1201 cacttgagca tctcgataag gtgtccagac actatatctc tgagataata caaaaagttc
     1261 atcctctttc ttcagacaaa cgtcacttac tttctattat tattaattct aatttcaact
     1321 tcagacatca aagtaactct aatctgtcaa ataatattct taatattaaa tcctttgata
     1381 aaattcagtc tgaaaatata caaacacata agaatacata ctctgaggat attaaagaaa
     1441 tctctaacca cgatttt
//
LOCUS       DAJVTL010000314         1420 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.322, whole genome shotgun sequence.
ACCESSION   DAJVTL010000314 DAJVTL010000000
VERSION     DAJVTL010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1420
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.322"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(126..986)
                     /locus_tag="OQQ26_004535"
     CDS             complement(126..986)
                     /locus_tag="OQQ26_004535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A broad-spectrum beta-lactamase TEM-1"
                     /protein_id="HCS1859715.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
     gene            complement(1169..>1420)
                     /locus_tag="OQQ26_004536"
     CDS             complement(1169..>1420)
                     /locus_tag="OQQ26_004536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1859716.1"
                     /translation="MGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTV
                     DRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS"
BASE COUNT          373 a          349 c          311 g          387 t
ORIGIN      
        1 gaaaactcac gttaagggat tttggtcatg agattatcaa aaaggatctt cacctagatc
       61 cttttaaatt aaaaatgaag ttttaaatca atctaaagta tatatgagta aacttggtct
      121 gacagttacc aatgcttaat cagtgaggca cctatctcag cgatctgtct atttcgttca
      181 tccatagttg cctgactccc cgtcgtgtag ataactacga tacgggaggg cttaccatct
      241 ggccccagtg ctgcaatgat accgcgagac ccacgctcac cggctccaga tttatcagca
      301 ataaaccagc cagccggaag ggccgagcgc agaagtggtc ctgcaacttt atccgcctcc
      361 atccagtcta ttaattgttg ccgggaagct agagtaagta gttcgccagt taatagtttg
      421 cgcaacgttg ttgccattgc tgcaggcatc gtggtgtcac gctcgtcgtt tggtatggct
      481 tcattcagct ccggttccca acgatcaagg cgagttacat gatcccccat gttgtgcaaa
      541 aaagcggtta gctccttcgg tcctccgatc gttgtcagaa gtaagttggc agcagtgtta
      601 tcactcatgg ttatggcagc actgcataat tctcttactg tcatgccatc cgtaagatgc
      661 ttttctgtga ctggtgagta ctcaaccaag tcattctgag aatagtgtat gcggcgaccg
      721 agttgctctt gcccggcgtc aacacgggat aataccgcac cacatagcag aactttaaaa
      781 gtgctcatca ttggaaaacg ttcttcgggg cgaaaactct caaggatctt accgctgttg
      841 agatccagtt cgatgtaacc cactcgtgca cccaactgat cttcagcatc ttttactttc
      901 accagcgttt ctgggtgagc aaaaacagga aggcaaaatg ccgcaaaaaa gggaataagg
      961 gcgacacgaa aatgttgaat actcatactc ttcctttttc aatattattg aagcatttac
     1021 cagggttatt gtctcatgag cggatacata tttgaatgta tttagaaaaa taaacaaata
     1081 ggggttccgc gcacatttcc ccgaaaagtg ccacctgacg tctaagaaac cattattatc
     1141 atgacattaa cctataaaaa taggcgtatc acgaggccct ttcgtcttca agaattttat
     1201 aaaccgtgga gcgggcaata ctgagctgat gagcaatttc cgttgcacca gtgcccttct
     1261 gatgaagcgt cagcacgacg ttcctgtcca cggtacgcct gcggccaaat ttgattcctt
     1321 tcagctttgc ttcctgtcgg ccctcattcg tgcgttctag gatcctccgg cgttcagcct
     1381 gtgccacagc cgacaggatg gtgaccacca tttgccccat
//
LOCUS       DAJVTL010000315         1403 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.323, whole genome shotgun sequence.
ACCESSION   DAJVTL010000315 DAJVTL010000000
VERSION     DAJVTL010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.323"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(339..1124)
                     /locus_tag="OQQ26_004537"
     CDS             complement(339..1124)
                     /locus_tag="OQQ26_004537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001493613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859717.1"
                     /translation="MYDYSFLLTPSTGFVKGLCGVWSNDFSINDDSDSDLGQTDIHLL
                     SSPHLNIISDPNELASKLKGLLMLMNGALSVLYGFERYQSFGPLSISGSEGINYSEIC
                     GFKSMDVTQVNPFNFHDIQQPHPRADNFSRLINLSSKHESLRVVLGMCALGYDWVNLY
                     RLWETIREYVYDKYVKGILNFPDAYKGKKYQRDKVISMAFNIDEKEISRFTGTANSFE
                     LLGYLARHGKGSSGGILKNPMSRVDASIFVHKATYKYCKLFLM"
BASE COUNT          458 a          284 c          238 g          423 t
ORIGIN      
        1 tcaattgtcc gtgcgtgccg acactatatg aattcaacgc cagatcggcc gggcattgag
       61 gagcttaact tctccctcgg cgcagttcgt aaggtagtag gaattaacat cggagaacta
      121 ttgaaacact atgaaatcca ggtgagtcac gaattgcatt ctattattcc taaatgaatt
      181 ttaaccaata actcaagttg gcgaagcctg aaaaagatga gcttcgccat ttttctcgga
      241 ccttgagtaa ttagtgcaga cacaataagc atattgtttt cgagtgcacg acgaacgtag
      301 ttttcgatac tttgagtatt atagcttcaa ctttttactt acatcaaaaa taacttacaa
      361 tatttgtaag ttgctttgtg tacgaaaatg cttgcgtcaa ctcttgacat cggatttttt
      421 aatatccctc cggaacttcc ctttccatgt ctcgcaagat accctaacag ttcaaagcta
      481 ttagcagtgc ccgtgaatct gctgatttcc ttttcatcaa tattaaaagc catgctaatt
      541 actttatctc tctgatattt cttgccttta taagcgtcgg ggaaatttag tatacctttc
      601 acatatttat catatacata ttctctaatt gtttcccaca aacgataaag attaacccaa
      661 tcataaccta aggcacacat acctaaaaca acacgtaagg attcatgttt agatgataaa
      721 ttaattaatc gtgaaaaatt atcagcgcga gggtgtggtt gctgtatgtc atggaaatta
      781 aaggggttta cctgagttac atccattgat ttaaagccgc atatttccga gtaattaatg
      841 ccttcacttc cagaaataga aagaggacca aaagattgat atctttcaaa accataaaga
      901 acgctaagtg cgccgttcat gagcatcaac aaacctttta acttggaagc caattcattt
      961 gggtcggata tgatattcaa atgaggagat gaaagtaaat gaatatctgt ttgccctaaa
     1021 tcagagtcag aatcatcatt tatagagaaa tcattcgacc aaactccaca taatccttta
     1081 acaaatcctg tagatggagt aagtaaaaaa ctataatcgt acataactca aatccctctt
     1141 ttttatatcc taaatggaat acaaaaatta ttgtttattt gttatgttca atatactcac
     1201 ataaccgaaa actttaacac gctcattcta agtgaactaa atctaaagat atacctttga
     1261 aaactgaaaa ctcaatgctg gcaacgtccg ctcctggcac aaagcgaaca ttccttgacg
     1321 tcctgtcagg gaaacccacc tggacgttca ggtgattctg tcgattatag tcataaaaaa
     1381 gccgccccgg agggctgagg aat
//
LOCUS       DAJVTL010000316         1386 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.324, whole genome shotgun sequence.
ACCESSION   DAJVTL010000316 DAJVTL010000000
VERSION     DAJVTL010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.324"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..1205
                     /gene="hipA"
                     /locus_tag="OQQ26_004538"
                     /pseudo
     CDS             1..1205
                     /gene="hipA"
                     /locus_tag="OQQ26_004538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416024.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system serine/threonine
                     protein kinase toxin HipA"
BASE COUNT          375 a          298 c          355 g          358 t
ORIGIN      
        1 ccgttatgcc agaccgttgt cactttcgct gccattgcag agggggaata tcacctctga
       61 taccgtattt aacttcttcg ataacctgtt acccgatagc ccgattgtac gtgaccggat
      121 cgttaaacgt tatcatgcca aatccagaca accgtttgat ttattgtcag aaatagggcg
      181 agacagcgtt ggtgccgtga cgttaatacc cgaagacgaa accgtaacgc atccgataat
      241 ggcatgggaa aagcttactg aagccagact tgaagaagta ttaacggctt ataaagcaga
      301 tatcccgcta ggcatgatta gagaagaaaa tgactttcgc atctcggttg ctggcgcaca
      361 ggagaagaca gcactgctca gaataggcaa tgactggtgc attccgaaag gaataacgcc
      421 gacgacgcac atcattaaat taccgattgg cgaaatcagg cagcccaatg cgacgctcga
      481 tctcagccaa agcgttgata atgagtatta ctgtctgctg ctggcgaaag gttccggacg
      541 cagaaatcat taaagcggga agggtgcgcg cgttagcggt cgaacgtttt gacaggcgtt
      601 ggaatactga gcgaacggtt ttacttcgct tgccacagga ggatatgtgt cagacattcg
      661 gtttaccttc atcggtgaaa tatgaatcag atggaggccc aggcatcgcg cggatcatgg
      721 cgtttttgat ggggtccagc gaggcgcttc gcgatcgtta tgattttatg aaattccagg
      781 tcttccagtg gttgattggc acaacggatg gccatgcaaa aaacttctcc gtatttattc
      841 aggctggcgg cagttatcga ctcacgccat tttacgacat catttcagca tttccggtcc
      901 ttggcggtac gggaatacac atcagcgatc tcaaactggc aatggggctt aacgcatcca
      961 aaggcaaaaa aacggcaatc gataaaattt atccgcgaca ttttttggcg acagcaaagg
     1021 tgctgagatt cccggaagtg cagatgcatg aaatcctaag tgactttgcc agaatgattc
     1081 cggcagcact ggataacgtg aagacttcat taccgacaga ttttccggag aacgtggtga
     1141 cgacagttga aaccaatgtg ttgaggttgc atggacggtt aagccgagaa tacggtagta
     1201 agtgagatat ggggtttggt cgttgttaat gagcaatcat gaccgccaac gactggattc
     1261 ttccttggtt tatgctggtg cacataatgt atattatgtt aaatcatgtc tgagtgatgc
     1321 gaagtgcttt tctggtagtc gttattcgtt cagggttcca gaacttaagc ctctcctctt
     1381 tcataa
//
LOCUS       DAJVTL010000317         1354 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.325, whole genome shotgun sequence.
ACCESSION   DAJVTL010000317 DAJVTL010000000
VERSION     DAJVTL010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.325"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(143..655)
                     /locus_tag="OQQ26_004539"
     CDS             complement(143..655)
                     /locus_tag="OQQ26_004539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HCS1859718.1"
                     /translation="MMEWINALMNYFVLHPYRLWGLLFIIAFTKSTLLISAILPPASI
                     MMATVITVSKTTLSPWEAGITVMSGAWCGTIVNYHLGIIIGHIPQLACIISSRSNTIE
                     RVRLQLQNNSVSILFTSRFIAVLRYIAPLVAGMLQLHPVKVYTVSLISAASWSALYVG
                     SFSFVLPFFS"
     gene            850..>1354
                     /locus_tag="OQQ26_004540"
     CDS             850..>1354
                     /locus_tag="OQQ26_004540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859719.1"
                     /translation="MAKPDWEAIESAYRAGVLSLRDIGEKYGVTEGAIRKRAKKLGWA
                     RSGGTQVCKNGTQKRKVRTSRKPAITGLTQKSTQLKTESTPDTKPIRGMRTDPPTNPF
                     QPGNQQALKHGGYARRLLLKDEVIEDAKALTLEDELFRLRANNLVAAENIGRWLVSLE
                     DANGDQER"
BASE COUNT          417 a          291 c          334 g          312 t
ORIGIN      
        1 acagcattga gaatgcttca ggagtacatc aggatccaat gccttggggg gtagcggtaa
       61 ttttactcat tatccttcaa atcagattct gttgtcagag gaatggggga agctggattc
      121 gcaagagctt tttatgggca gtttagctaa aaaaaggcaa cacgaagcta aaactaccaa
      181 cataaagtgc tgaccagcta gcagctgaaa tcagactcac tgtatacact ttcactggat
      241 gaagttgcaa cattcctgcc accaaaggag caatataacg cagcacggcg ataaagcgcg
      301 aagtgaaaag tattgacaca gagttatttt gcaactgaag gcgaacccgt tctattgtat
      361 tggaacggct cgatattata catgcaagtt gagggatatg cccaattatt ataccaagat
      421 ggtaattaac gatagtaccg caccatgcgc cactcatgac cgtgattcca gcttcccatg
      481 gtgaaagagt cgtcttgctg actgtaatta cagtggccat cataattgat gctggtggca
      541 atatcgccga aatgagtaaa gtggattttg tgaacgctat tataaaaaga agcccccata
      601 ggcgatatgg atgaagtaca aaatagttca tcaaagcatt tatccactcc atcaatgtct
      661 ttccttctgt gaatttttct ttgctattta accgtgatac gacttaattt aggcttaaac
      721 accttacatt tacaaggtac tcctgtgggg ggccctgcca cggagcgtcg caggagtgag
      781 tgatgaggaa gaattaaagc aacctattgt gacaggcagc gataacagta aatcacagaa
      841 agcataatca tggcaaaacc ggactgggag gccatcgaat cggcataccg ggccggagtc
      901 cttagcctcc gtgatatagg cgagaaatac ggcgttacag aaggggctat caggaagagg
      961 gccaaaaagc ttggttgggc acgcagtggc ggtacgcagg tttgcaaaaa tggtacgcaa
     1021 aaaaggaaag tgcgtaccag cagaaagcct gccattactg gccttacaca aaaaagtacg
     1081 caactaaaaa cagaatctac accggatacg aaaccgatac gcggaatgcg taccgatccc
     1141 ccgactaacc cattccaacc cggtaaccag caggcattaa aacacggtgg ttatgcccgt
     1201 cgccttctgc tcaaagatga ggtgatagag gacgctaaag cgttgacgct cgaggacgaa
     1261 ttatttcgcc ttcgtgctaa caaccttgtc gctgcagaga atattggccg gtggttggtg
     1321 tcgctggaag atgctaatgg ggaccaggaa agga
//
LOCUS       DAJVTL010000318         1297 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.326, whole genome shotgun sequence.
ACCESSION   DAJVTL010000318 DAJVTL010000000
VERSION     DAJVTL010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.326"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..409
                     /locus_tag="OQQ26_004541"
                     /pseudo
     CDS             1..409
                     /locus_tag="OQQ26_004541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            568..1206
                     /gene="ospI"
                     /locus_tag="OQQ26_004542"
     CDS             568..1206
                     /gene="ospI"
                     /locus_tag="OQQ26_004542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspI"
                     /protein_id="HCS1859720.1"
                     /translation="MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSE
                     LAATLQKMINPSGGDGNCSGCALHACMAMLGYGVREAPVPNEISEYMTGFFHRHLEQI
                     DSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLD
                     VQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC"
BASE COUNT          379 a          226 c          324 g          368 t
ORIGIN      
        1 tagttgttcc cggcatgagc gtttccgttg tcgctcatgt aaacgtgttt tccagctcac
       61 ttactcttat gaagccagaa aacccggcgt taaggagcag atcgttgaaa tggcacataa
      121 cggcgcaggg ggccgtgata ccgccaggac actgaaaatc ggcatcaata ccgtcatacg
      181 gacattaaaa agctcccgcc ccggcggata acatctgcgc cagtcgctca cgctgatgtt
      241 gcccttatct gtgaacttga tgagcagtgg cgcttcgttg gcagcaaggc tgcaacaaca
      301 ctggctctgg tatgcgtaca acactaaaac tggcggtgtg ttggcttaca ctttcgggcc
      361 acggaatgat gagacctgtc gggaactgtt agccctgttt actccgttct gtatatatta
      421 ggccgttggt ggtaagtgga tcacttttta gactcgaata gctgcagttc acaaaaacag
      481 gaatccggct ccgttttttg ttgccatatc agagggatat ttgttatgaa gaaaatatag
      541 tgagtatata tactgtcagg atacaatatg attaatgggg tgtcgttaca gggaactgct
      601 ggatatgagg cacatacaga ggagggaaat gtaaatgtaa aaaaattgct ggaatcttta
      661 aactctaaaa gtcttggtga tatggataaa gattctgaat tggcagcgac tttacagaaa
      721 atgataaatc cgtctggtgg ggatggtaac tgttcagggt gtgcgcttca tgcttgtatg
      781 gctatgttag ggtatggagt aagagaggct cccgtaccta atgaaatatc agagtatatg
      841 accggatttt ttcataggca tttagagcaa attgatagtg aaggcatagt gtcacatcct
      901 aatgaaactt atagtaaatt tcgtgagcgt attgcagaaa atattttaca aaacacttca
      961 aaaggaagtg tagtaatgat ttctattgaa caggccactc attggatagc tggatttaac
     1021 gatggtgaaa aaattatgtt tttggatgtt caaacaggaa agggatttaa tctttatgat
     1081 cctgtagaaa aatcgccaga tgcatttgta gatgaaaata gttcggttca ggtaattcat
     1141 gtatctgatc aggaatttga tcactatgct aacagtagta gttggaagag taagaggctt
     1201 tgctgatgct gagagcctgt acatagattt gagccggccc cttgaaacgc cagacagtgg
     1261 atgtatctta aaataagaga taggcttgga tatatgt
//
LOCUS       DAJVTL010000319         1283 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.327, whole genome shotgun sequence.
ACCESSION   DAJVTL010000319 DAJVTL010000000
VERSION     DAJVTL010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.327"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>1283
                     /locus_tag="OQQ26_004543"
     CDS             <1..>1283
                     /locus_tag="OQQ26_004543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415419.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HCS1859721.1"
                     /translation="GLVVVFSWVFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHT
                     MGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVL
                     FIFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETF
                     IPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGS
                     LAMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSI
                     DAPLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVLVAILIMLPILGIGDMNNLY
                     KWLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKSLAMTVGIWCFAFTAF
                     ACLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLG"
BASE COUNT          279 a          276 c          339 g          389 t
ORIGIN      
        1 ggggctggtg gttgtttttt catgggtgtt tatctttgcg ctctatttca caccttatgc
       61 gctaattgtt ggtcagttag gctcgacctt caaagatggg aagggcgggg tcagtacctg
      121 gattaaacac acgatgggac ccggactggc ttacctcgcc gcgtggacct actgggtggt
      181 gcatattccc tatctggcac aaaaacccca ggcaatactg attgcgctcg gttgggcgat
      241 gaaaggcgac ggttcgctaa tcaaagaata ttcagtcgta gcgttacagg ggttaacgct
      301 ggtgctgttt atcttcttta tgtgggttgc ttcacgcggt atgaaatcgc tgaaaatcgt
      361 cggttctgtg gcagggattg cgatgtttgt tatgtcgctc ctgtatgtgg cgatggcggt
      421 aaccgcgcct gcgattactg aagtgcatat tgcgaccaca aacattacct gggaaacgtt
      481 cattcctcat atcgacttta catacattac cactatttca atgctggttt tcgcggttgg
      541 cggagcagag aagatttctc cttacgttaa tcaaacgcgc aacccaggaa aagaatttcc
      601 aaaagggatg ttatgcctgg cggtgatggt tgcggtttgt gccattctgg gctcactggc
      661 gatggggatg atgtttgact cgcgtaatat cccggatgac ttaatgacta acggtcaata
      721 ttacgccttt cagaagctgg gcgagtatta caacatgggt aatactttaa tggtgattta
      781 cgccattgcg aataccctgg gacaagtcgc tgcgctggta ttctcgattg atgccccgct
      841 taaagtgcta ttaggtgatg ctgacagcaa atatattcca gccagtttat gtcgtaccaa
      901 cgcttctggt acgcccgtta atggctattt tctgaccctg gtgctggtgg caattctgat
      961 tatgctgccg attctcggca tcggtgatat gaacaatctc tataaatggc tgttgaatct
     1021 taactcggta gtgatgccgc tgcgttattt atgggtattt gttgcattta ttgcagtcgt
     1081 tcgcctggca cagaaatata agccggaata tgtctttatt cgtaataagt ctctggcaat
     1141 gaccgtcggg atttggtgtt ttgcctttac cgcctttgcc tgtttgacgg ggatcttccc
     1201 gaaaatggaa gccttcaccg cagagtggac cttccagttg gcgctcaatg ttgcaacgcc
     1261 gtttgtgctg gttggattag gac
//
LOCUS       DAJVTL010000320         1273 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.328, whole genome shotgun sequence.
ACCESSION   DAJVTL010000320 DAJVTL010000000
VERSION     DAJVTL010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.328"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..228
                     /locus_tag="OQQ26_004544"
     CDS             <1..228
                     /locus_tag="OQQ26_004544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HCS1859722.1"
                     /translation="LSGRLAIKVIAEPPDKRRRDLDNILKAPLDALTHAGVLMDDEQF
                     DEINIVRGQPVSGGRMGVKIYPIMHEEQVKK"
     gene            225..1046
                     /locus_tag="OQQ26_004545"
     CDS             225..1046
                     /locus_tag="OQQ26_004545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein"
                     /protein_id="HCS1859723.1"
                     /translation="MKLEDLPKYYSPKSPGLTDASASTSKDALSITDVMAAQGMTQNR
                     AEMGFSAFLGKMGISMNDRARATELLADYALSRCDRVAALRKLPAEIKPVVMRIMASY
                     AFEDYARSAASKKQCPCCYGEKFIESVVFTNKVQYPDGKPPVWAKCTKGVYPSYWEEW
                     KKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGY
                     ERLPSTEVFNAICEVTNQITRASWEKTVKKFYDALVTRFDIEEAWAERQLKKVTR"
     gene            1190..1265
                     /locus_tag="OQQ26_004546"
     tRNA            1190..1265
                     /locus_tag="OQQ26_004546"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1223..1225,aa:Ile,seq:cat)
BASE COUNT          341 a          258 c          374 g          300 t
ORIGIN      
        1 ctgtccggaa ggctggcgat aaaggtgatt gcagagccac cggataagcg tcgtcgcgac
       61 ctggacaata tcctgaaagc accgctggat gcgctgacgc atgcgggagt gttaatggac
      121 gatgagcagt ttgatgaaat caatatcgtt cgtggtcagc cagtatctgg tggacgtatg
      181 ggggtgaaga tttaccccat aatgcatgaa gagcaggtca aaaaatgaaa ctggaagatt
      241 taccgaaata ctactcccca aaatcccctg gcctgaccga tgcatcggcc tcaacgtcaa
      301 aagatgcgct gagtatcact gatgtgatgg ccgcgcaggg catgacacag aatcgggctg
      361 agatggggtt ttctgcgttc ctggggaaaa tgggcatcag tatgaatgac agggcgcggg
      421 caacagaatt actggcagat tatgcactca gtcggtgcga tcgtgtggcg gcgttgagaa
      481 aacttccggc agaaataaaa ccggtagtga tgcgcattat ggcttcgtac gcttttgagg
      541 attatgcccg cagcgcagcg agtaaaaagc agtgcccttg ttgctatggg gaaaaattta
      601 ttgaaagcgt agtttttaca aacaaggtcc agtatccgga tggtaagccg ccggtatggg
      661 caaagtgtac gaaaggtgtg tatccgtctt actgggaaga atggaaaaaa gtcagggagg
      721 tggtaaaagt tgcctgtccg gagtgtggcg gaaagggtga ggtttccacc gcctgtaagg
      781 attgccgtgg gcgtggtgtc gccattcacc gtgaagagtc ggtaaaacgt ggtatgcctg
      841 ttatcagaga ctgccagcgt tgtggtggtc gtggctatga aagactacca tcaacggagg
      901 tatttaatgc tatatgcgag gtgacaaacc agataacacg cgcgtcatgg gaaaaaacag
      961 ttaagaaatt ctatgatgcg ctggtgaccc ggtttgatat tgaagaagca tgggctgagc
     1021 ggcagttaaa aaaggtaact aggtaacaag gttgattttt ccggaatctg tggtaaattc
     1081 gtcataacga tgggcttttt atgcctgacg ttagaagagt ttctacaacc cgccgccgag
     1141 cgggtttttt attgcggaat taattacgga ccgttattat tctgctcccg gccctttagc
     1201 tcagtggtga gagcgagcga ctcataatcg ccaggtcgct ggttcaaatc cagcaagggc
     1261 caccatcaca aac
//
LOCUS       DAJVTL010000321         1258 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.330, whole genome shotgun sequence.
ACCESSION   DAJVTL010000321 DAJVTL010000000
VERSION     DAJVTL010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.330"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..179)
                     /locus_tag="OQQ26_004547"
     CDS             complement(<1..179)
                     /locus_tag="OQQ26_004547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1859724.1"
                     /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDT
                     FVILEGVISLRREENV"
     gene            complement(267..1181)
                     /gene="ehaB"
                     /locus_tag="OQQ26_004548"
                     /pseudo
     CDS             complement(267..1181)
                     /gene="ehaB"
                     /locus_tag="OQQ26_004548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308451.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin EhaB"
BASE COUNT          333 a          313 c          286 g          326 t
ORIGIN      
        1 acgttttctt ctctacgcag agagataacg ccctctaaaa taacgaaagt atcttcgcta
       61 ttgacatcac tggaaaatat aacttgcttt tcattattaa actcgaagcg cgtaccgtat
      121 ctggacaaac atttatcgag cttaccaaat tcctgaagag gtttaactac agataacatt
      181 tgcgcgtcct ttgcagtaat gcccgtcaaa tccttgacgg gcattattta gattaaatta
      241 ccagaatttc ttcggagtga agaatattac caagtatatt taacacccac gttcgcggac
      301 cagtcttgat ctacgtcacc accaccgagg tagttagcat cggtataggc gctgaagttc
      361 ttggtgaagc tgaactgagt acccagacca acacgtaccg cagacccttc agtaccgtta
      421 tcgatggaat caccgttcac atcgttatcg ttgttagagt cgtcgtagac gtaagccagt
      481 ttgaagtacg gagtcagagc ctgatcttcg ctgtaggtga aggtataacc tgcatctaca
      541 cccggttcat aacgcatgct gtcgtaagac tgaccgtcaa ctttcatgtc gttgctcagc
      601 tggtagtcat caccagactg gaacagacca gaaacgctgc cgtaaggagt cacgtaacca
      661 gcatcaccca gtttgaagtc gtaaccggct ttcaaaccga agccccacgc gtcggagttg
      721 gtgctaccgt caacgtaagt accgttgctc atggttgcag acaggtcgtt gttgaagtga
      781 gagtagctca agctaccatc aacaaagacg ttgttcgcga agtgagcaga agagtagatg
      841 taggcagtct ggctgtcttg atccacctta ccagaacggt cattcatgtc acctttagcg
      901 aagcctgcag ccgcaccgac gatccactta gcgttgttac cgtcaatttt ggtatcaaca
      961 ccgaccatga tgccgttaac atcctgatca tagttgatgg tgccgttgtc gccgttgaag
     1021 ttaccaccga agtagcttac ccatgcgccg ccgttatcag ccaggccatg acgagagttg
     1081 gtcagacgag taccaacggt gtcttgttcc aggttccaga tattggtgtt cgcagacggg
     1141 atgctcagcg ccatgttagc gtagtcggtc agttccagtt tatcagtacg gaaagcttca
     1201 gtatcgaact gatcaacatt cacatccagc acaccaccgt tagtcacagt gatagtat
//
LOCUS       DAJVTL010000322         1203 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.331, whole genome shotgun sequence.
ACCESSION   DAJVTL010000322 DAJVTL010000000
VERSION     DAJVTL010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.331"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..781)
                     /gene="ipaH4.5"
                     /locus_tag="OQQ26_004549"
     CDS             complement(<1..781)
                     /gene="ipaH4.5"
                     /locus_tag="OQQ26_004549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH4.5"
                     /protein_id="HCS1859725.1"
                     /translation="MKPINNHSFFRSLCGLSCISRLSVEEQCTRDYHRIWDDWAREGT
                     TTENRIQAVRLLKICLDTRDPVLNLSLLKLRSLPPLPLHIRELNISNNELISLPENSP
                     LLTELHVNGNNLNILPTLPSQLIKLNISFNRNLSCLPSLPPYLQSLSARFNSLETLPE
                     LPSTLTILRIEGNRLTVLPELPHRLQELFVSGNRLQELPEFPQRLKYLKVGENQLRRL
                     SRLPQELLALDVSNNLLTSLPENIITLPICTNVNISGNPLST"
BASE COUNT          344 a          216 c          260 g          383 t
ORIGIN      
        1 gagtcgacaa tggattccct gaaatgttaa cattcgtaca aatgggcaat gtgattatat
       61 tttcgggtaa tgaagttagt aggttattgg aaacatccag tgccaatagt tcttgcggta
      121 atctggataa tctgcgtagt tgattttcac ctaccttcaa atattttaag cgctgaggaa
      181 attctggtag ttcctgtagt ctgttgccgg aaacaaagag ttcttgtagt ctatgaggca
      241 attcaggcaa gacagtaagg cgattacctt caatacgtaa tattgttagc gttgatggaa
      301 gctctggtaa cgtctccaga ctattaaaac gtgccgagag tgattgtaaa tatggtggta
      361 atgatggcag acatgacaaa tttcgattga atgaaatatt aagcttaatc agttgagatg
      421 gaagtgtcgg gagtatattc aagttgttac catttacatg aagttctgtc aaaagcggag
      481 aattttcagg tagggagatt aactcattgt tggaaatatt aagttcacgt atatgcaaag
      541 ggagtggtgg taaagaacgt agtttcagta agcttaaatt gagaacagga tcccgggtat
      601 ccagacatat tttcaataat cgaaccgcct ggatgcgatt ttctgttgtt gttccttccc
      661 tagcccagtc atcccagatg cggtggtaat ctctggtaca ctgttcttct accgataaac
      721 gagatataca tgataagcca caaagggaac gaaaaaaaga atgattgttg atcggtttca
      781 tttattaacc cctcactatt catatcttgg tctattaatg caaataaaac gagaaagtct
      841 ttaaaaaaac aatcctagag ctttatcggc gttttcattc cggctggagg aatatgttcc
      901 tgtctttcca gtaaccgtcg attgttatat cagtctaccc atgttaatgt gaccagttct
      961 actttcatcc agtttggatt gatctttatc ccctatattt tcaaacaatt tttatcattt
     1021 aactcattac tgtctcgata ttcccatagc aaacgatctg gttggttagc ccctcaaaaa
     1081 agtcagttgc acgccgtaaa tccctgccgg tattgagcga ggatttacgg gttgttgtta
     1141 aggtccgtaa tcgggtcaca gtttttccgg agtcaatccg gtctgcggtt tatgcttatg
     1201 cga
//
LOCUS       DAJVTL010000323         1188 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.332, whole genome shotgun sequence.
ACCESSION   DAJVTL010000323 DAJVTL010000000
VERSION     DAJVTL010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.332"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(9..167)
                     /locus_tag="OQQ26_004550"
     CDS             complement(9..167)
                     /locus_tag="OQQ26_004550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HCS1859726.1"
                     /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
                     AFWVQTRD"
     gene            350..649
                     /locus_tag="OQQ26_004551"
     CDS             350..649
                     /locus_tag="OQQ26_004551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1859727.1"
                     /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
                     TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
     gene            659..1183
                     /gene="ygaP"
                     /locus_tag="OQQ26_004552"
     CDS             659..1183
                     /gene="ygaP"
                     /locus_tag="OQQ26_004552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YgaP"
                     /protein_id="HCS1859728.1"
                     /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
                     VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLP
                     VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYAVNSGFFLLSGFVGAGLLFAGISGFCG
                     MARLLNKMPWNQRA"
BASE COUNT          325 a          270 c          281 g          312 t
ORIGIN      
        1 acacaggttt aatcgcgggt ttgcacccag aacgcgtgaa tcaaaccggg gatataccca
       61 agcagtgtca acagaatatt aataataaac gcccaaccga accctttacc gagcagcacg
      121 ccgagcggcg gcagaatgat ggtgatgacg attctccaga aacccatatg tactccctat
      181 aagaaaatta ctcattgttt aaaaagagat tttatctctt aagcgtagta attttagcgg
      241 aggctgccag tttcagctta cgcttttact ctcatttacg ctgctgatgc tggtatatgt
      301 tgcattttta gtttagagtt tacttaattt agctaacact taaatgacta tgactgaact
      361 cgcgcaatta caggccagtg ccgaacaggc agcggcctta ttgaaagcaa tgagccaccc
      421 taaacggttg ctgattctgt gcatgcttag cggttccccc ggcaccagcg cgggagagct
      481 gacgcgcatt accggactga gtgcctctgc gacatcacag catcttgctc gtatgcggga
      541 cgaagggctt atcgacagcc aacgggatgc ccaacgcatt ctatattcca ttaaaaatga
      601 ggcggtaaat gccattatcg ccaccctgaa aaatgtctat tgtccgtaag gagtcactat
      661 ggctttgaca accatttcgc cgcatgatgc acaagaatta atcgcacgcg gcgcaaagtt
      721 aatcgatatt cgtgatgctg atgaatatct tcgtgaacat attcctgaag cagatctggc
      781 tccattatcc gtgctggaac agtcaggtct tccacctaaa ttacgtcgcg agcaaattat
      841 attccactgc caagcaggta aacgcaccag taataacgcc gataaattag cagcgattgc
      901 cgcccccgca gaaatctttt tactcgaaga tgggattgat ggctggaaaa aagcaggatt
      961 gccagtagcg gtaaataaat ctcaaccctt gccgttaatg cgccaggtgc agatcgctgc
     1021 gggtggttta atattaatcg gcgttgtact gggttatgct gtaaatagcg gtttcttctt
     1081 attaagtggc tttgttggtg ccgggttact gtttgcagga atcagcggtt tttgtggaat
     1141 ggcaaggttg ttaaataaga tgccgtggaa ccaacgagct tgagaagc
//
LOCUS       DAJVTL010000324         1179 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.333, whole genome shotgun sequence.
ACCESSION   DAJVTL010000324 DAJVTL010000000
VERSION     DAJVTL010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.333"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..804)
                     /gene="ipaH9.8"
                     /locus_tag="OQQ26_004553"
     CDS             complement(<1..804)
                     /gene="ipaH9.8"
                     /locus_tag="OQQ26_004553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH9.8"
                     /protein_id="HCS1859729.1"
                     /translation="MLPINNNFSLPQNSFYNTISGTYADYFSAWDKWEKQALPGEERD
                     EAVSRLKECLINNSDELRLDRLNLSSLPDNLPAQITLLNVSYNQLTNLPELPVTLKKL
                     YSASNKLSELPVLPPALESLQVQHNELENLPALPDSLLTMNISYNEIVSLPSLPQALK
                     NLRATRNFLTELPAFSEGNNPVVREYFFDRNQISHIPESILNLRNECSIHISDNPLSS
                     HALQALQRLTSSPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQS"
     gene            complement(1066..>1179)
                     /locus_tag="OQQ26_004554"
     CDS             complement(1066..>1179)
                     /locus_tag="OQQ26_004554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
                     /protein_id="HCS1859730.1"
                     /translation="KIVALTKWLRYVIEHIQDWPANRVRDLLPWKVDLTSQ"
BASE COUNT          327 a          207 c          285 g          360 t
ORIGIN      
        1 agattgtttg ttttccggga accatgctgt cacggcatca gccagggggc gatggagtgt
       61 attctgttgt ccgtcactca tggagaagta aatccgtggg ccgtggtagt ccggcgaaga
      121 ggttaatctt tgcagggctt gcagagcatg ggatgataat gggttatcac taatatgtat
      181 tgaacattca ttcctcagat taagaatgct ttccgggata tgacttatct gatttctatc
      241 aaaaaaatac tctctgacaa cgggattatt tccctcagaa aatgctggta gctcagtgag
      301 gaaattacgg gtcgctctga gatttttcag agcctgtggg agcgatggta aggagactat
      361 ttcgttatag ctgatattca tagtcaataa cgaatcgggt aaagctggca ggttttccag
      421 ctcattgtgt tgtacctgaa gtgactccag cgcaggaggt agcacgggca attctgataa
      481 tttattgctg gcggaatata atttttttag cgtaacaggc agttcaggta ggttagttaa
      541 ttgattatat gatacattga gcagcgttat ctgagctggt aagttgtcag gtagcgagga
      601 cagatttaaa cggtccagtc gaagttcatc ggaattattg ataagacatt ctttaagtcg
      661 ggagacagcc tcatcacgct cttcaccggg gagcgcttgt ttttcccatt tatcccatgc
      721 tgaaaagtaa tcagcatatg taccggaaat agtgttataa aaagaatttt ggggcaatga
      781 aaagttatta tttatcggta acatgatggg catccagtta aagccggtgg acaaatggct
      841 ttgttaaaag aaataagtag gagtttttat gaagttcatt ccatgaaatg aacttcagca
      901 tttttttatt ataataagga taaacaaaat tggctgtaaa aaaacgatac tgtttcagtt
      961 aaccgtgaat ggcctgtttg caccgtattg ttcttgtttt tcggttagtt aaacatcgta
     1021 cttcatattt gaacggtaag cggctcgtca gaaccgtatt gatatttact gagaggtcag
     1081 atcaactttc cagggcaaca gatcgcgtac ccggtttgcc ggccagtcct ggatatgctc
     1141 aatgacgtaa cgcagccatt ttgtcaacgc cacgatttt
//
LOCUS       DAJVTL010000325         1146 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.334, whole genome shotgun sequence.
ACCESSION   DAJVTL010000325 DAJVTL010000000
VERSION     DAJVTL010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.334"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(403..1053)
                     /gene="zinT"
                     /locus_tag="OQQ26_004555"
     CDS             complement(403..1053)
                     /gene="zinT"
                     /locus_tag="OQQ26_004555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HCS1859731.1"
                     /translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGNPLTEVEQKAANGV
                     FDDANVQNRTLSNWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA
                     TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
                     YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
BASE COUNT          332 a          206 c          231 g          377 t
ORIGIN      
        1 tgcaacgaaa agcagcgtta tccaatgtaa ataaatttga gtttttgaga atcggttcat
       61 ttttgtagct cctgtaattt ttacagtcaa gctatcccac gaaccttaaa aattccttat
      121 acagatgtgg ttttaagaat ttgttattta aaaaattgat agtgcacatt gtaaccagcc
      181 aatataagca atggcgtgag cacaggtatc tttctctgtt ggccgtattg tgtatggaat
      241 ccgttattgg ttaactcaat gcgggttagc ttattaatat acagacacgt catagtgatg
      301 agcgtgtctg tagctagctt gcgttcagtg gcgtttgtgg atggaccagt ggcagttatg
      361 atgacttact aaagcggcat cgaggcgtta tcatgagaat actcaatgag acatcatttc
      421 ctcgaccact tcttcgctac tcaactgata tggataatac gttggccagt tttccatttc
      481 atttaataaa gattgctgtg aatcattacc cataaaaatg tgaaaatgag atgattttcg
      541 tggtgcaatt atatgatcgc taaattgtat atatttaggg gctttgcttt caggatcttt
      601 acattcgaat aagtaacgaa cgcctttctt gcctgattta taggtgagta ttttgtatcc
      661 atcgtaatca tatttacagg atgttgtttc attatttcta tggaattcaa caatgccgtc
      721 ctcaatgcca atcatctcga tatctgttgc ataacctttg tgataataat ctttaatttc
      781 agcaaatgtt ttagttttat ctgcatccgc tttcttctga aagacggggt caagtttgcc
      841 actttgcagt aaaggataaa cggattgcca gactccatcc cagttactga gcgttcggtt
      901 ttgtacattg gcatcatcaa aaacaccatt agcagctttt tgttcgacct ctgttaaggg
      961 gttgccgtgt gagtgatgac catgcgaaaa agcaggagcg ctaacaataa agacacctaa
     1021 agcaacagcc agtttgtgaa gacgaatcgc caaaacagtt tcctccagag tcattgtata
     1081 tgatgtgtaa tgttatattg tagcatatga caaaatgcaa caactcttag gagatgagag
     1141 cattga
//
LOCUS       DAJVTL010000326         1109 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.335, whole genome shotgun sequence.
ACCESSION   DAJVTL010000326 DAJVTL010000000
VERSION     DAJVTL010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.335"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..591
                     /locus_tag="OQQ26_004556"
     CDS             <1..591
                     /locus_tag="OQQ26_004556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707740.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859732.1"
                     /translation="SDTDWLRLAMVKDLQPGEMTADAEDDTYLDDEDADWKTTTQGQK
                     SVGDTLATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVFRGWLSSLGKTITS
                     KEVMTRTVKISGVGRPYLAEEGAETVGVTGLTVAPASVSVKAISVHSSDPQTASVTLS
                     GLVATVKGVKQGSVSIVGMTSDGEFVAVAAVTVSAP"
     gene            650..1036
                     /locus_tag="OQQ26_004557"
     CDS             650..1036
                     /locus_tag="OQQ26_004557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707739.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HCS1859733.1"
                     /translation="MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEG
                     ELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGAER
                     VLSLSGMGTIENAGDDDHEALTPEKS"
     gene            1045..>1109
                     /locus_tag="OQQ26_004558"
     CDS             1045..>1109
                     /locus_tag="OQQ26_004558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
                     /protein_id="HCS1859734.1"
                     /translation="MQFVMRLAREFRRADWRRMLS"
BASE COUNT          245 a          246 c          365 g          253 t
ORIGIN      
        1 tcggacactg actggctgcg tcttgcgatg gtgaaggatc tgcaacctgg cgaaatgacc
       61 gctgatgcag aagatgacac ttatctcgat gatgaagatg cagactggaa aacgacaacc
      121 caggggcaga agtccgtcgg tgatactttg gcgacgctgg cctggcgtcc gggtgacagc
      181 gggcagaaaa aactggttca gttgttcgat tccggtgaag tctgcgcgtt tcgtatcaaa
      241 taccccaacg gtacggttga tgttttccgt ggctggctga gttctctggg taaaaccatt
      301 acctcaaaag aggtgatgac ccgtactgta aaaatcagcg gtgtggggcg tccgtatctg
      361 gcagaggagg gcgctgaaac cgtgggtgtt accggactga cggtggcacc ggcatctgtc
      421 agtgtcaaag cgatcagtgt gcattcgtca gatcctcaga ctgcttcggt gaccctgagc
      481 gggcttgtgg ccacggtgaa aggcgtgaag cagggcagtg tcagcatcgt gggcatgacc
      541 tctgacggag agtttgtggc agtggctgcg gtgaccgtca gcgcaccata acaggacgat
      601 actcatcatt gccccggtta tccggggctt tttgcatccg gagaacatga tgtttctgaa
      661 acaggatacg tttaattatg aaaaacagtc cgtggtgctc agtgagctgt ccgggctgca
      721 gagaattgaa tatctgacgt ttgttcagca gcgaacggca aagtttgatg cacaggaggg
      781 agaactgccg gaggctgaac gacagattgc ttttctgcgt atgggaatgg atatcaatgc
      841 ctggctggtt tcccgctcac tgtggaatgc tgagcagtct caggatgttg agacgctttg
      901 cgcatccatt atgacaacat ggtcgtatga tgcgctgggc gcgggggcgg agagggttct
      961 gtcgctgagc ggtatgggga ccattgagaa tgccggggat gatgatcatg aggcgctgac
     1021 gccggaaaag tcctgacgcg ggaaatgcag tttgtcatgc ggcttgcccg ggagttccgg
     1081 cgggcagact ggcggcggat gctgtcgga
//
LOCUS       DAJVTL010000327         1083 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.336, whole genome shotgun sequence.
ACCESSION   DAJVTL010000327 DAJVTL010000000
VERSION     DAJVTL010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.336"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>1083
                     /gene="evgS"
                     /locus_tag="OQQ26_004559"
     CDS             <1..>1083
                     /gene="evgS"
                     /locus_tag="OQQ26_004559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HCS1859735.1"
                     /translation="TPYVFVMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEW
                     IKVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFP
                     RGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLV
                     GSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAF
                     EHYFTADYYKNAMLPLENSESPFKDVFSNTHEVTAETKENRTIYTQVFEIDNGIEKRC
                     INHWHTLCNLPASDNAVYICGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSH
                     EIRTPISSIMGFLELLSGSGLSKEQRV"
BASE COUNT          350 a          210 c          221 g          302 t
ORIGIN      
        1 aacgccttac gtttttgtca tgcaaaaagc gcctgacagt gaacaaacat taaaaaaagg
       61 aatgaaagtt gccattccat attattatga gctccattcg caattaaaag agatgtatcc
      121 ggaggtagag tggataaaag tcgataacgc cagcgctgca tttcacaagg tcaaggaagg
      181 tgaacttgat gctctggttg cgacacagtt gaattcgcgt tacatgatcg accattacta
      241 tcctaatgaa ctgtatcatt ttcttattcc cggcgttccg aatgcatcgc tttcgttcgc
      301 ttttcctcgc ggagaaccgg aacttaagga tattattaat aaagcactga atgcaattcc
      361 tccaagcgaa gttctgcgcc tgacggaaaa atggattaaa atgcccaatg tgaccattga
      421 cacatgggac ctatatagcg aacaatttta tattgttacg acattatccg ttttattagt
      481 tggcagtagc cttttatggg gattctacct gttacgctca gttcgtcgtc gtaaagtcat
      541 tcagggtgat ttagaaaacc aaatatcatt ccggaaagcg ctctcggact ccttaccgaa
      601 tccaacttat gttgtaaact ggcaaggtaa tgtcattagt cacaatagtg catttgaaca
      661 ttatttcact gcggattact acaaaaatgc aatgttgcca ttagaaaaca gtgaatcacc
      721 ctttaaagat gttttttcta atacgcatga agtcacagca gaaacgaaag aaaatcgaac
      781 aatatacaca caggtatttg aaattgataa tggcatcgag aaaagatgca ttaatcactg
      841 gcatacatta tgcaatcttc ctgcaagtga caatgcagta tatatttgtg gttggcaaga
      901 tattactgaa acgcgtgatc taattaatgc actcgaggta gaaaaaaata aagcgataaa
      961 ggctaccgta gcaaaaagtc agtttctggc aacgatgagt cacgaaataa gaacaccaat
     1021 aagctctatt atgggcttcc tggaacttct gtcgggttct ggtcttagca aggagcaacg
     1081 ggt
//
LOCUS       DAJVTL010000328         1065 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.337, whole genome shotgun sequence.
ACCESSION   DAJVTL010000328 DAJVTL010000000
VERSION     DAJVTL010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.337"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            3..1004
                     /gene="istA"
                     /locus_tag="OQQ26_004560"
     CDS             3..1004
                     /gene="istA"
                     /locus_tag="OQQ26_004560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001346239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HCS1859736.1"
                     /translation="MEIKILHKQGMSSRAIARELGLSRNTVKRYLQAKSEPPKYTPRP
                     AVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQE
                     QEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNMRYDTLETC
                     HRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPF
                     RAQTKGKVERMVQYTRNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVANQRKHET
                     IQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVSFDNPPQHHPLSIYDSFCRGVA"
     gene            1001..>1065
                     /locus_tag="OQQ26_004561"
     CDS             1001..>1065
                     /locus_tag="OQQ26_004561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859737.1"
                     /translation="MMMELQHQRLMALAGQLQLESL"
BASE COUNT          254 a          292 c          280 g          239 t
ORIGIN      
        1 ttatggaaat taaaatcctg cacaagcagg gaatgagtag ccgggcgatt gccagagaac
       61 tggggctctc ccgcaatacc gttaaacgtt atttgcaggc aaaatctgag ccgccaaaat
      121 atacgccgcg acctgctgtt gcttcactcc tggatgaata ccgggattat attcgtcaac
      181 gcatcgccga tgctcatcct tacaaaatcc cggcaacggt aatcgctcgc gagatcagag
      241 accagggata tcgtggcgga atgaccattc tcagggcatt cattcgttct ctctcggttc
      301 ctcaggagca ggagcctgcc gttcggttcg aaactgaacc cggacgacag atgcaggttg
      361 actggggcac tatgcgtaat ggtcgctcac cgcttcacgt gttcgttgct gttcccggat
      421 acagccgaat gttgtacatc gaattcactg acaatatgcg ttatgacacg ctggagacct
      481 gccatcgtaa tgcgttccgc ttctttggtg gtgtgccgcg cgaagtgttg tatgacaata
      541 tgaaaactgt ggttctgcaa cgtgacgcat atcagaccgg tcagcaccgg ttccatcctt
      601 cgctgtggca gttcggcaag gagatgggct tctctccccg actgtgtcgc cccttcaggg
      661 cacagactaa aggtaaggtg gaacggatgg tgcagtacac ccgtaacagt ttttacatcc
      721 cactaatgac tcgcctgcgc ccgatgggga gcactgtcga tgttgaaaca gccaaccgcc
      781 acggtctgcg ctggctgcac gatgtcgcta accaacgaaa gcatgaaaca atccaggccc
      841 gtccctgtga tcgctggctc gaagagcagc agtccatgct ggcactgcct ccggagaaaa
      901 aagagtatga cgtgcatcct ggtgaaaatc tggtgagctt cgacaacccc ccccagcatc
      961 atccactctc catctacgac tcattctgca gaggagtggc gtgatgatgg aactgcaaca
     1021 tcaacgactg atggcgctcg ccgggcagtt gcaactggaa agcct
//
LOCUS       DAJVTL010000329         1046 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.338, whole genome shotgun sequence.
ACCESSION   DAJVTL010000329 DAJVTL010000000
VERSION     DAJVTL010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.338"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(81..563)
                     /locus_tag="OQQ26_004562"
     CDS             complement(81..563)
                     /locus_tag="OQQ26_004562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1859738.1"
                     /translation="MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNAS
                     RTFVICLEDTLRVVGYYSLATGSVTHAELGRSLRHNMPNPVPVVLLGRLAVDVCTQGH
                     GFGKWLLSDAIHRVVNLADQVGIKAVMVHAIDDDARAFYERFGFVQSVVAPNTLFYKV
                     "
     gene            complement(554..856)
                     /locus_tag="OQQ26_004563"
     CDS             complement(554..856)
                     /locus_tag="OQQ26_004563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HCS1859739.1"
                     /translation="MEVFMSTVASVRKTPREHQINIRATDEERAVIDYAASLVNKNRT
                     DFIMELAYQEAKNIILDQRLFVLDNERYDSFITQLEAPVQNAEGRERLMAVKPEWK"
BASE COUNT          310 a          257 c          209 g          270 t
ORIGIN      
        1 tttttctgct cattattggc tccttctgat gccattctat ttcaggaagg agtgtccgtt
       61 aaactcaggc tacctcagac tcagacttta taaaacaagg tattaggtgc cacaactgac
      121 tgaacaaaac caaaacgctc ataaaatgct ctggcgtcat catcaattgc atgtaccata
      181 acagccttaa tgccaacctg atcagccaga ttgacaaccc ggtgaatggc atcacttagt
      241 agccatttac cgaaaccatg cccctgggta caaacatcaa cagccagacg ccctaacaga
      301 acaacaggga caggattggg catgttatgc cgcaaactgc gaccaagctc ggcatgagtg
      361 acggaaccag tagctaatga gtagtatccc acaacacgta aagtatcctc caagcaaata
      421 acgaacgtgc gagaagcatt gagcatctgg tttttcatag cccgaccacg taaccagtta
      481 cttagcacct catttccaca gtcaaatggc tgaagtatat gctcatccgt caacaatgct
      541 ggcgcggtga catttatttc cattcaggct ttaccgccat cagacgttca cgcccttctg
      601 cattctgcac aggagcttcc agttgcgtaa taaacgaatc ataacgttcg ttatccagca
      661 caaataaacg ttgatccagg ataatgtttt tagcttcctg gtacgccagt tccatgatga
      721 aatcggtacg gttcttattg accaagctcg cagcataatc aataacggct cgttcctcat
      781 cagttgcccg gatgttaatc tgatgttctc gcggtgtttt acggacgctt gcaactgtag
      841 acataaaaac ctccattggt aacaatttgc tatgcaatta atgttatcgc aaatggtaac
      901 agaacgctat acagaatcac ttacgggaaa agcgatcccc tgataaaaac aatggcagag
      961 acctgaacat tgtgacgatg atctgtgtcg gcgcacaaat catgtctgat tacggccgtt
     1021 taatgtgatt ttgataatga aatgcc
//
LOCUS       DAJVTL010000330         1010 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.339, whole genome shotgun sequence.
ACCESSION   DAJVTL010000330 DAJVTL010000000
VERSION     DAJVTL010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.339"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            91..279
                     /locus_tag="OQQ26_004564"
     CDS             91..279
                     /locus_tag="OQQ26_004564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859740.1"
                     /translation="MLTRKSIDTVLLSVGAEKLSQREWDWMKMLKPMDPPPAMVAASI
                     LERRGDTAALTRLQDTGG"
     gene            289..>1010
                     /locus_tag="OQQ26_004565"
     CDS             289..>1010
                     /locus_tag="OQQ26_004565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HCS1859741.1"
                     /translation="MLSAFTPRPLKRLFTANQCWTSFLDAGGLRDIEVEAVTKMLACG
                     TRILGVKEYNCDKPECPHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDWVHL
                     VFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLNWHP
                     HVHVSVTCGDLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSHITT
                     ESQRRSLVLKAGGKYWHVYMSK"
BASE COUNT          223 a          276 c          291 g          220 t
ORIGIN      
        1 gaaaaccgcc cctgttcgtc ctgttgttgc cgcacgctcc gcagaatatg tatgctctga
       61 ggacctgttt tattaaggac tcatcctctt atgttgaccc gcaaaagtat agataccgtt
      121 ctgctctctg ttggtgctga gaagctctca caacgtgaat gggactggat gaagatgctc
      181 aaacccatgg acccaccacc tgcgatggtc gcggcctcca tcctggagcg ccgtggcgac
      241 acagcagccc ttacccggct acaggatacc gggggttaat ccgtcctcat gttgtccgct
      301 tttactcccc gcccgctgaa acgtctgttc acggccaacc agtgctggac atccttcctg
      361 gatgcgggcg gtctgcgcga tatcgaggtt gaggctgtca caaaaatgct ggcctgcggc
      421 acgcggatac tgggcgtgaa ggaatacaac tgcgataaac ctgagtgccc ccacgtcaga
      481 tacgtcacta actcatgcgg cagccgtgcc tgcccgtcct gcggaaaaaa ggccacagac
      541 ctgtggatag cgacacagct gaatcgtctt cctgactgcg actgggtaca cctggtcttc
      601 accctgccgg acacgctgtg gccggtgttc gaaagcaacc ggtggctgct gaatgacgtg
      661 tgccgtctgg cggtggagaa tctgctgtat gccgcccgga aacgggggca ggaacccggt
      721 atcttctgcg ccatccacac gtatggccgt cgtctcaact ggcatccgca tgtacatgtg
      781 tctgtaacct gtggagatct gaataagcat ggtcagtgga aaaagctgag cttcctgaaa
      841 gacgcgatgc gttcacggtg gatgtggaat atgcggcagc tgcttctgaa agcgtggtca
      901 gaggggctgg cgatgccgga gtcgttgtca catatcacga cggaatcaca gaggagaagc
      961 ctggtgctga aagccggagg aaaatactgg catgtgtaca tgtcgaaaaa
//
LOCUS       DAJVTL010000331          988 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.340, whole genome shotgun sequence.
ACCESSION   DAJVTL010000331 DAJVTL010000000
VERSION     DAJVTL010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.340"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            401..964
                     /locus_tag="OQQ26_004566"
     CDS             401..964
                     /locus_tag="OQQ26_004566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859742.1"
                     /translation="MNDREFQRFLEESKARNKHNSYAYTNSPTSYELPAFTKSERKNI
                     EAVIRSITPRDRFMPVRKEKENTLKTFLMSFDSYEQLPSKIEDIIIGTCRSLGRDNYH
                     RKIFYLLRSLDKISSGAITNYLQRLQRQATRLSYELPSDKYCANLTTICNKVIETINH
                     HVEVGNISLTTSEPDFEFDPYLVTEEF"
BASE COUNT          336 a          205 c          181 g          266 t
ORIGIN      
        1 ttaggacggg tctttgtggt cataatcctt aaggtcaagc gtccatgtac gaccgaacag
       61 tttaaagacg ataagcactc tgacgaggac gtagcgaagt agcagacctg caataagtcc
      121 aatacctcca ccggcccata catcaggtga ccccaattct gaagggagat ttaccattaa
      181 atttcctgtg tgcaatgcaa taaccatgtg acatacatag ttgattcggt ttatcgaata
      241 aacctcatag ccacgccttt atattttact ctccccataa acccattata ccacagatgt
      301 taataagatg ttaaaaaatg cttgacatta gtctttggaa atactagtat tgtgtatatg
      361 ggttaacaga gaattaacaa ttataagggc caacttatga atgaacgaca gagaatttca
      421 aaggtttctg gaagagagta aggcaagaaa caagcacaac tcctacgctt acacaaactc
      481 ccccaccagc tacgaactgc cagcctttac caaatccgaa cgtaaaaaca ttgaagcggt
      541 cattcgtagc attacgccac gagacagatt tatgccagta cgcaaagaaa aagaaaatac
      601 tttaaaaact ttcttgatga gttttgacag ctatgaacaa ttaccatcaa aaattgaaga
      661 tataattatc ggtacttgtc gcagtcttgg aagagataat tatcaccgga agattttcta
      721 tttgcttcga agccttgata agattagctc aggtgcaata acaaattatc ttcagcgtct
      781 tcagcgacaa gcaaccagac ttagctacga gctaccatct gataagtatt gcgctaattt
      841 aactaccatt tgcaataaag ttatcgagac aatcaatcat catgttgagg ttggtaatat
      901 cagccttacg accagtgagc cagatttcga gtttgacccg tatttagtta cagaggaatt
      961 ttaaaatgaa taaacacact ttgacccg
//
LOCUS       DAJVTL010000332          976 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.341, whole genome shotgun sequence.
ACCESSION   DAJVTL010000332 DAJVTL010000000
VERSION     DAJVTL010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..976
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.341"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..496)
                     /locus_tag="OQQ26_004567"
     CDS             complement(<1..496)
                     /locus_tag="OQQ26_004567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HCS1859743.1"
                     /translation="MLNVAIENQNGWNYSAPAPHKTGAGIATPTMTTAHNRAQAVFLC
                     VKHSHIQIMVGRAGQPQGWPVSVVTGCSNPVRLTTHEIATSGGELFKLTIEAAIMATI
                     LTLSHPDVTIENGRAVTTSVAVAEFFRKMHKNVIQKIETLECSPEFNRLNFKPVTYTD
                     AKGEK"
BASE COUNT          255 a          249 c          225 g          247 t
ORIGIN      
        1 gtttttcgcc tttggcgtcg gtataggtga cgggcttaaa attaagccgg ttaaactccg
       61 gcgagcattc gagagtttcg atcttctgaa taacgttttt gtgcattttc cggaagaact
      121 ccgcaaccgc aacagacgta gtgacagcgc gaccattttc gatggttacg tcagggtgag
      181 aaagggtaag gatagtagcc atgatggcag cctcgatagt cagtttaaat aactcaccac
      241 cagaggtagc aatctcatgg gtggtgagac gcacagggtt gctacaaccg gtgactaccg
      301 aaaccggcca gccttgcggc tgccctgcac gccccaccat aatctgaatg tggctgtgct
      361 tgacgcataa aaaaaccgcc tgagcgcggt tatgcgcagt agtcatcgtc ggggtagcaa
      421 tcccggcacc cgttttatga ggtgcaggtg cactataatt ccacccgttc tggttttcaa
      481 tagctacatt caacattttc tctcaccttt catcaccgaa gtgaattttg tgatgcggtg
      541 cctggtgcct ccaggtgacg ttaaccagtt aacaattaca gtcggctttc ccacccaaac
      601 caataaggac taacatgact tttaactgtg ccgcgtgcgc ttagccgcat tcaccgcatc
      661 acaaaattca ctttaaaaag ggcggacatc agccagcaat taaaccgatg ccgccaactg
      721 gtacttcaca cagcaatgtc gttatttaca accggaagcg cactcccacc atttaaattt
      781 cacagacaag accgactctt tatggatacc ggaaatgcgc cttcgtgttg tgcccggttt
      841 tatttcacca cctccgggct ttggtggtat ctttactgaa gttctcacac aaccagtaag
      901 gaaatgaata tgccaacgta tctcgccaga gtagaactat ataatgctga gccagaggat
      961 tacgaagggc ttcata
//
LOCUS       DAJVTL010000333          974 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.342, whole genome shotgun sequence.
ACCESSION   DAJVTL010000333 DAJVTL010000000
VERSION     DAJVTL010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.342"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>974
                     /locus_tag="OQQ26_004568"
     rRNA            <1..>974
                     /locus_tag="OQQ26_004568"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          245 a          223 c          312 g          194 t
ORIGIN      
        1 ctagctggtc tgagaggatg accagccaca ctggaactga gacacggtcc agactcctac
       61 gggaggcagc agtggggaat attgcacaat gggcgcaagc ctgatgcagc catgccgcgt
      121 gtatgaagaa ggccttcggg ttgtaaagta ctttcagcgg ggaggaaggg agtaaagtta
      181 atacctttgc tcattgacgt tacccgcaga agaagcaccg gctaactccg tgccagcagc
      241 cgcggtaata cggagggtgc aagcgttaat cggaattact gggcgtaaag cgcacgcagg
      301 cggtttgtta agtcagatgt gaaatccccg ggctcaacct gggaactgca tctgatactg
      361 gcaagcttga gtctcgtaga ggggggtaga attccaggtg tagcggtgaa atgcgtagag
      421 atctggagga ataccggtgg cgaaggcggc cccctggacg aagactgacg ctcaggtgcg
      481 aaagcgtggg gagcaaacag gattagatac cctggtagtc cacgccgtaa acgatgtcga
      541 cttggaggtt gtgcccttga ggcgtggctt ccggagctaa cgcgttaagt cgaccgcctg
      601 gggagtacgg ccgcaaggtt aaaactcaaa tgaattgacg ggggcccgca caagcggtgg
      661 agcatgtggt ttaattcgat gcaacgcgaa gaaccttacc tggtcttgac atccacggaa
      721 gttttcagag atgagaatgt gccttcggga accgtgagac aggtgctgca tggctgtcgt
      781 cagctcgtgt tgtgaaatgt tgggttaagt cccgcaacga gcgcaaccct tatcctttgt
      841 tgccagcggt ccggccggga actcaaagga gactgccagt gataaactgg aggaaggtgg
      901 ggatgacgtc aagtcatcat ggcccttacg accagggcta cacacgtgct acaatggcgc
      961 atacaaagag aagc
//
LOCUS       DAJVTL010000334          947 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.343, whole genome shotgun sequence.
ACCESSION   DAJVTL010000334 DAJVTL010000000
VERSION     DAJVTL010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.343"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            615..>947
                     /locus_tag="OQQ26_004569"
     CDS             615..>947
                     /locus_tag="OQQ26_004569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HCS1859744.1"
                     /translation="MFKSLLISKMDGRHSAQIAEIAESELPQGDVEVNVDCSSINYKD
                     ALAITGRGPIVRHFPMVPGIYFAGTVSASSHPEYQTGDKVLLTGWGVGEKHWGGLSEK
                     ARVKGDWLT"
BASE COUNT          267 a          184 c          244 g          252 t
ORIGIN      
        1 gatgcactac cgagatttga atcaaagcgt tggtatgcaa gggatgtgtc gaactctcta
       61 gtgggaaaac tgcggaggaa ttgcggggaa gtggcgggga aaaacttcac tgttgatgct
      121 gaacagtctt tctggttggc tcttgttcgc actatgtaca gtgttagttt gattaaactc
      181 ggtgagtgtg acaaagacgg taatttttgc agttttaggt gaagtctaat gggttaagtg
      241 atttcggcta tgctcccgac agattaacac gctacatcgg taactatgtc agcgcttggc
      301 taacgaagct gaaggtccgc tgtgagcgat gagcagacca actaatctca gcctacttgt
      361 tttatttcat cagtacgccc tgaagcatcg actgcgtatc ttgtaggacc gctaacattg
      421 atgcctatat aattgaagac cgaatctggt ttgatataaa tcaaaaaaga tagatttaac
      481 ctgatgaaaa gaaaagcaat tcttgttttc tgacaaacac tgggatatca gcgttgatta
      541 ttagacgatc ggtcaatatt gtttattgac tactttatag ctaaatgaca tcaaaccaga
      601 aagacgagaa aaaaatgttt aaatccttat taatcagtaa gatggatggt cgccacagtg
      661 cccaaattgc tgaaatcgct gaaagcgagc tgccacaggg ggatgtggag gtcaatgtcg
      721 actgttcatc tatcaactac aaagacgcac tggctattac gggccgcggg cctatcgtcc
      781 ggcactttcc aatggtgcca ggcatttatt ttgccggtac agtgtccgcc agctcacatc
      841 ctgaatatca gaccggggat aaggtcctgc tgaccggctg gggtgtagga gaaaaacatt
      901 ggggtgggct ttccgaaaaa gcgcgggtaa agggagactg gctgacg
//
LOCUS       DAJVTL010000335          900 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.344, whole genome shotgun sequence.
ACCESSION   DAJVTL010000335 DAJVTL010000000
VERSION     DAJVTL010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.344"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(192..323)
                     /locus_tag="OQQ26_004570"
     CDS             complement(192..323)
                     /locus_tag="OQQ26_004570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3927 family protein"
                     /protein_id="HCS1859745.1"
                     /translation="MIAYCFCEWHCSSRIMSVLADGVLVAGVVVVAFPLLKKKTPDC"
     gene            complement(782..858)
                     /locus_tag="OQQ26_004571"
     tRNA            complement(782..858)
                     /locus_tag="OQQ26_004571"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(822..824),aa:Arg,seq:tct)
BASE COUNT          281 a          246 c          160 g          213 t
ORIGIN      
        1 ggtgcctccc ggtgaattca gtaccagcac ctgaatccgc gattatccca tatacctact
       61 cgctgattgc ccctccgcac agggggattc accatgccag tttcttttaa caaactcccc
      121 gcaaaccaga caacagtcaa ccgcctgaat tgtgaagtat ttaaaaattt ttcccgctaa
      181 ctgatacccg gctaacagtc tggcgttttc tttttcagca acgggaaagc aacaaccacc
      241 acacccgcca ccagcacacc gtcagccagc actgacatta tccggctgct gcaatgccat
      301 tcacaaaaac agtaagcaat cactttttac cgtaacaggt gataatccat accacaggtc
      361 ctggctattc tgttgtactc ctgaacaaga gcaaataatt ctgaattaga aaccatgaac
      421 tcatcgcaaa ccctctgaat agcatcacta ttcagaataa taacgtctct tcccgaaaga
      481 cgatcaggag tacagaacaa aactgtcaaa cggctgaagg cctttgctcg tgctgcattg
      541 actatatcaa tacgctgcct aaggatgaaa caccccgacg cctcatcaat atgcactcta
      601 cccacaccat atgaatgata aatatttaat gctgaaaaaa ccattagacc gtataacaaa
      661 cactcaatca atacttaaca gaacttttat ttttgacaaa catataatat tttcaacaat
      721 atcctgagcc aggtatattc cagtataagg ctctgccgga aggaatctgg aagaatgaat
      781 atggcgcgct gtactggatt cgaaccagtg accgattgct tagaaggcaa ttgctctgtc
      841 cggctgagct aacaacgctg aataccgata atggaccgcc atcggggacc cgcccccgca
//
LOCUS       DAJVTL010000336          875 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.345, whole genome shotgun sequence.
ACCESSION   DAJVTL010000336 DAJVTL010000000
VERSION     DAJVTL010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..875
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.345"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..132
                     /locus_tag="OQQ26_004572"
     CDS             <1..132
                     /locus_tag="OQQ26_004572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308857.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HCS1859746.1"
                     /translation="TGKKVFLKSGKVQLTNSGSDPLVGVVWADAGAGAEEVPVKLNV"
     gene            125..400
                     /locus_tag="OQQ26_004573"
     CDS             125..400
                     /locus_tag="OQQ26_004573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA breaking-rejoining protein"
                     /protein_id="HCS1859747.1"
                     /translation="MSDPFSRQAARMDAITVRKMGKMASINDVYMPVLPGETLAELNA
                     LSGPAVSLVVFSSGYRPRRGDRVVYDGQQWTVTRHERFNGKPMIFIE"
     gene            412..>875
                     /locus_tag="OQQ26_004574"
     CDS             412..>875
                     /locus_tag="OQQ26_004574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706636.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859748.1"
                     /translation="MKGLENAIHNLNSLDTRMVPQASAWAVNRVAAKIISVATRQVAQ
                     NTVAGDNQVKGIPLKTVRERVRLLKASPSGKMYARMRVNRGNLPAIKLGTAQVRLARS
                     RHGSNSRHRGSVLKVGKYLFRDAFIQQLANGRWHVMRRIDGKNRYPIDVVKIP"
BASE COUNT          205 a          212 c          266 g          192 t
ORIGIN      
        1 acgggtaaga aggtttttct gaagtccgga aaagttcagc tgactaacag cggctctgat
       61 ccgctggtcg gggttgtctg ggcagatgcc ggagctggtg cagaagaagt gccggtaaaa
      121 ctcaatgtct gatccctttt cccggcaggc agcgcgtatg gatgcgatca cggtcagaaa
      181 gatgggaaag atggcctcga ttaatgatgt ttatatgcct gtgctcccgg gagaaactct
      241 ggcagagctg aacgctctgt ccggaccggc ggtctctctg gtggtgtttt cttcgggata
      301 ccgcccacgg cgcggggacc gcgttgttta tgacggacaa caatggacgg tcacacggca
      361 tgaacgcttt aacggtaaac caatgatctt tattgagtaa agaggtgtgg gatgaagggg
      421 cttgagaatg ccatccataa tctgaacagc ctcgataccc gcatggtgcc acaggccagc
      481 gcatgggcgg taaaccgtgt ggcggcaaag attatttctg tcgccacacg gcaggttgcg
      541 cagaataccg ttgccgggga taaccaggtg aaaggtattc ccctgaaaac ggtcagggag
      601 cgtgtcaggc tgcttaaagc cagcccctca ggaaaaatgt atgcccgcat gcgtgttaac
      661 cggggtaacc tgcccgccat taagctgggt accgcacagg tcagactggc ccgctcccgg
      721 catggcagca actcacgtca tcgtggcagc gtactgaaag tggggaaata ccttttccgg
      781 gatgcgttta ttcagcaact ggcgaatggt cgctggcatg tgatgcggcg tattgacggc
      841 aaaaatcgtt accccattga tgtggtgaaa atccc
//
LOCUS       DAJVTL010000337          851 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.346, whole genome shotgun sequence.
ACCESSION   DAJVTL010000337 DAJVTL010000000
VERSION     DAJVTL010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.346"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..163
                     /locus_tag="OQQ26_004575"
     CDS             <1..163
                     /locus_tag="OQQ26_004575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HCS1859749.1"
                     /translation="QIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQ
                     QSLDRLLAA"
     gene            complement(204..740)
                     /locus_tag="OQQ26_004576"
     CDS             complement(204..740)
                     /locus_tag="OQQ26_004576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YniB family protein"
                     /protein_id="HCS1859750.1"
                     /translation="MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
                     GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
                     DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
                     PVICIAAGYVFFSLLGFI"
BASE COUNT          257 a          201 c          173 g          220 t
ORIGIN      
        1 acaaatctat gacggctatc agtcagtatc cccgctacct gccgatttcc ttgaacgtca
       61 accggtttac caactctaca cgctgttaaa tcgtgcaaga ttatttggcg gtcagcattt
      121 ggttattgct cagcagtcat tggatagatt attagcagca tgatatgggt tgaggataat
      181 ggccgctccg tgcggccttt tgattaaata aacccaagca gagaaaagaa cacataacct
      241 gcagcaatac aaataaccgg caggatatat agtgagaaaa actgcaggaa aatagtatgg
      301 tgcggaacaa caatacggga ctcaatttgt tcacgcgtta gcccctcttc ccctttggct
      361 ttttccagaa tgagttgatc ttcaacacct tcccgcaaga agcgcgcctg gcgactcatc
      421 cgggcaccgg aatcctgcaa cgccagtccg acaaaaatca ggatgaaaat cacccagaac
      481 ataacgttca cgccaccatt aaaattaggg gtcggggagt tataccagaa cagattcaaa
      541 aaaggcgtat tcgcctgcat catatcgatc atgacatgag taaagtcgag catgaccgca
      601 ttaatgcctt cctggttttc ctgccgggta ttcataaatt tcagcaaaga aatcaatgta
      661 gagatcaatg caggtataaa aatcacccaa cccaaaatcc ttttcaaaac agcaatgcgt
      721 ccagcttgtt gatacgtcat gagttctcct tgattaagac gcgtcgtttc acttagttta
      781 cctgtagata tctgttttcg cccattcttt aaatggcgat atgatagacg cttaatcata
      841 agcacggctt a
//
LOCUS       DAJVTL010000338          845 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.347, whole genome shotgun sequence.
ACCESSION   DAJVTL010000338 DAJVTL010000000
VERSION     DAJVTL010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.347"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            20..>845
                     /locus_tag="OQQ26_004577"
     CDS             20..>845
                     /locus_tag="OQQ26_004577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630-like element IS630 family transposase"
                     /protein_id="HCS1859751.1"
                     /translation="MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
                     DVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGD
                     FGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEK
                     MAAIHKALDECSAEHPVFYEDEVDIHLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGA
                     LHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYIIHKSRETQSWL"
BASE COUNT          222 a          223 c          233 g          167 t
ORIGIN      
        1 tcaccaaccg gactgagcaa tgccgatcat agcaccaatt tcccgtgacg aacgacgcct
       61 gatgcagaaa gccatccata aaacacacga taaaaattat gcccgcagac tgactgccat
      121 gctgatgctg caccggggcg accgtgtcag cgacgttgcc agaacgctct gctgcgcccg
      181 ttcctctgtt ggacgctgga ttaactggtt cacgcagtcg ggtgttgagg gactgaaatc
      241 attacctgcc gggcgtgccc gtcgctggcc gtttgagcat atctgcacac tgttacgtga
      301 gctggtaaaa cattctcccg gcgactttgg ctaccagcgt tcacgctgga gtacagaact
      361 gctggcaata aaaatcaatg agataaccgg ttgccagtta aatgccggaa ccgttcgccg
      421 ctggttgccg tctgcgggga ttgtgtggcg aagggctgcg ccaactctgc gtatccgtga
      481 cccgcataaa gatgaaaaga tggcagcaat ccataaagca ctggacgaat gcagcgcaga
      541 gcatccggtc ttttatgaag atgaagtgga tatccatctt catcccaaaa tcggtgcgga
      601 ctggcaactg cgcggacagc aaaaacgggt ggtcacgccg ggacagaatg aaaaatatta
      661 tctggccgga gcgctgcaca gcgggacagg taaagtcagc tatgtgggcg gcaacagcaa
      721 aagttcggcg ctgttcatca gcctgctgaa gcggcttaaa gcgacatacc gtcgggcgaa
      781 aaccatcacg ctgatcgtgg acaactacat tatccacaaa agccgggaaa cacagagctg
      841 gctga
//
LOCUS       DAJVTL010000339          817 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.349, whole genome shotgun sequence.
ACCESSION   DAJVTL010000339 DAJVTL010000000
VERSION     DAJVTL010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.349"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..86
                     /locus_tag="OQQ26_004578"
     CDS             <1..86
                     /locus_tag="OQQ26_004578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1859752.1"
                     /translation="HGLGMDVIFRRRLHQLIGRNGCCAASS"
     gene            161..>817
                     /locus_tag="OQQ26_004579"
     CDS             161..>817
                     /locus_tag="OQQ26_004579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013124600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1859753.1"
                     /translation="MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEA
                     ADMAAQALGLSRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELL
                     QKRFLTKQKRSLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAA
                     RDLQGVGGEPPAVTAPLEQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMV
                     V"
BASE COUNT          157 a          246 c          266 g          148 t
ORIGIN      
        1 cgcacgggct gggcatggat gtcattttca gaagacgact gcaccagttg attgggcgta
       61 atggctgttg tgcagccagc tcctgacagt tcaatatcag aagtgatctg caccaatctc
      121 gactatgctc aatactcgtg tgcaccaaag cgaggtgagc atggcgacgg acaccccacg
      181 gattccagaa caaggcgtgg ccactctgcc tgatgaggct tgggagcgtg cgcgccgtcg
      241 tgcggagatc atcagtccgt tggcgcagtc ggagacggtc gggcacgaag cggccgatat
      301 ggcggctcag gcgctgggct tgtctcggcg ccaggtatac gttctgatcc ggcgtgcccg
      361 gcaaggcagc ggcctcgtga cggatctggt gcccggccag tccggtggag gtaaaggtaa
      421 ggggcgcttg ccggaaccgg tcgagcgcgt catccacgag ctactgcaaa agcggttcct
      481 gaccaagcag aagcgcagcc tagcggcctt tcaccgcgaa gtcactcagg tgtgcaaggc
      541 tcaaaaactg cgagtgccgg cgcgcaatac cgtggcctta cggatcgcta gccttgaccc
      601 gcgcaaggtc atccgccggc gggaaggcca ggatgccgct cgtgacctac aaggtgtggg
      661 cggcgagcct cctgccgtga ccgcgccgct ggagcagata gaccatacgg tcatcgacct
      721 gatcgtggtc gatgaccgcg accggcaacc tattggccgc ccgtacctga ccctcgccat
      781 cgacgtgttc acccgctgcg tgctcggcat ggtcgtc
//
LOCUS       DAJVTL010000340          778 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.351, whole genome shotgun sequence.
ACCESSION   DAJVTL010000340 DAJVTL010000000
VERSION     DAJVTL010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.351"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(32..736)
                     /locus_tag="OQQ26_004580"
     CDS             complement(32..736)
                     /locus_tag="OQQ26_004580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HCS1859754.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
BASE COUNT          178 a          208 c          200 g          192 t
ORIGIN      
        1 atgaggcagc cttttgtctt attcaaaggc cttacatttc aaaaactctg cttaccaggc
       61 gcatttcgcc caggggatca ccataataaa atgctgaggc ctggcctttg cgtagtgcac
      121 gcatcacctc aatacctttg atggtggcgt aagccgtctt catggattta aatcccagcg
      181 tggcgccgat tatccgtttc agtttgccat gatcgcattc aatcacgttg ttccggtact
      241 taatctgtcg gtgttcaacg tcagacgggc accggccttc gcgtttgagc agagcaagcg
      301 cgcgaccata ggcgggcgct ttatccgtgt tgatgaatcg cgggatctgc cacttcttca
      361 cgttgttgag gattttaccc agaaaccggt atgcagcttt gctgttacga cgggaggaga
      421 gataaaaatc gacagtgcgg ccccggctgt cgacggcccg gtacagatac gcccagcggc
      481 cattgacctt cacgtaggtt tcatccatgt gccacgggca aagatcggaa gggttacgcc
      541 agtaccagcg cagccgtttt tccatttcag gcgcataacg ctgaacccag cggtaaatcg
      601 tggagtgatc gacattcact ccgcgttcag ccagcatctc ctgcagctca cggtaactga
      661 tgccgtattt gcagtaccag cgtacggccc acagaatgat gtcacgctga aaatgccggc
      721 ctttgaatgg gttcatgtgc agctccatca gcaaaagggg atgataagtt tatcacca
//
LOCUS       DAJVTL010000341          772 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.352, whole genome shotgun sequence.
ACCESSION   DAJVTL010000341 DAJVTL010000000
VERSION     DAJVTL010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.352"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..390
                     /locus_tag="OQQ26_004581"
     CDS             <1..390
                     /locus_tag="OQQ26_004581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HCS1859755.1"
                     /translation="TAVKEMRFYGVSGVTANDLRTAEAMVRSREENEFTDWFSLWGPW
                     HAVLKRTEADRWAQAEEQKYEMLENEYPQRVADRLKASGLSGDADAEREAGAQVMRET
                     EQQIYRQLTDEVLALRLPENGSQLHHS"
     gene            complement(391..570)
                     /locus_tag="OQQ26_004582"
     CDS             complement(391..570)
                     /locus_tag="OQQ26_004582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001039895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859756.1"
                     /translation="MNKPQLAESQKTALLTEAESVIRPPGRAVRLNRETDESGEARGR
                     ASVFPESVRSVVYAM"
     gene            complement(570..>772)
                     /locus_tag="OQQ26_004583"
     CDS             complement(570..>772)
                     /locus_tag="OQQ26_004583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706811.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HCS1859757.1"
                     /translation="AQTHMVWSDADNQQVKLSMPELEELAAAMVQAQVDRNDEIYRRQ
                     REMKEELSGLDDLASIRAFDVE"
BASE COUNT          181 a          222 c          208 g          161 t
ORIGIN      
        1 actgccgtga aggaaatgcg tttctatggc gtgtcgggag tgacagcaaa tgacctccgc
       61 actgccgaag ccatggtcag aagccgtgaa gagaatgaat ttacggactg gttctccctc
      121 tggggaccat ggcatgctgt actgaagcgt acggaagctg accgctgggc gcaggcagaa
      181 gagcagaaat atgagatgct ggagaatgag taccctcaga gggtggctga ccggctgaaa
      241 gcatcaggtc tgagcggtga tgcggatgcg gagagggaag ccggtgcaca ggtgatgcgt
      301 gagactgaac agcagattta ccgtcagctg actgacgagg tactggccct gcgattgcct
      361 gaaaacggct cacaactgca ccattcataa tcacatcgca taaaccacag accggactga
      421 ctccggaaaa acagaggccc gcccccgggc ctccccggat tcatccgttt ccctgttcag
      481 cctgacagca cgccccggcg gccggatgac agactccgct tcggtaagca aagcggtctt
      541 ctgtgattcc gccagttgcg gcttattcat tactcaacgt caaacgcccg aattgaagcc
      601 aaatcatcca gaccgctcag ctcctctttc atttcacgct gacggcgata aatctcatcg
      661 ttgcgatcga cctgcgcctg caccattgct gccgccagtt cttccagttc cggcatcgac
      721 agtttcacct gctgattatc cgcatcactc cacaccatat gtgtttgtgc cg
//
LOCUS       DAJVTL010000342          770 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.353, whole genome shotgun sequence.
ACCESSION   DAJVTL010000342 DAJVTL010000000
VERSION     DAJVTL010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.353"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(23..580)
                     /locus_tag="OQQ26_004584"
     CDS             complement(23..580)
                     /locus_tag="OQQ26_004584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000211421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HCS1859758.1"
                     /translation="MTVQISVKNLSPVTYNQIPVITTELLAQLYGTEPVRIRQNHHEN
                     KVRFVEGKHFFKVVGNDLKELRVALNYSQNPISPKNRSLILWTERGAARHAKMLETDQ
                     AWDVFEKLEDCYFSQKEPSTPVSCQKSYDTRVLCYQQGGVTVSTIQLRDDDIVISLES
                     WLELARANGWFVVRRDKLVERLMQL"
BASE COUNT          202 a          190 c          181 g          197 t
ORIGIN      
        1 tggctaaaat tgcaagaact ttttaaagct gcatcagcct ttccaccagt ttatctctgc
       61 gaacaacaaa ccaaccattg gctctcgcca gttccagcca tgactcaagg gaaataacaa
      121 tatcatcatc ccgcaactga attgtggaaa cagtgacacc gccttgctga taacagagaa
      181 ctcgcgtgtc gtaacttttc tggcatgaaa ctggcgttga cggctccttt tgactgaaat
      241 agcagtcttc cagtttttcg aacacatccc acgcctgatc ggtttcgagc atttttgcgt
      301 ggcgggctgc gccgcgttct gtccagagaa tgagggagcg gtttttggga gagatgggat
      361 tttgtgagta gtttaaagct acccgcaatt ctttaaggtc attaccaaca actttgaaaa
      421 agtgtttccc ttcaacgaag cgtactttgt tctcatgatg attctggcga atacgcaccg
      481 gctcagtgcc gtaaagctgc gccaaaagtt cggtggtaat aacaggaatc tggttatagg
      541 taacagggga aaggtttttg acagaaatct gaacagtcat aacgacctcg cgtttcgatg
      601 gtttttaact caccacctgc gacgccaatc gctgggtggt gaactgtgca gggttggcgt
      661 aaccggtcga aacatccggc gagtctctca actcccccac acagcccacc ataaatcgcg
      721 aatgtgactg tgcttagcgc ataaaaaaac cgccagcgcg gttatgcacc
//
LOCUS       DAJVTL010000343          768 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.354, whole genome shotgun sequence.
ACCESSION   DAJVTL010000343 DAJVTL010000000
VERSION     DAJVTL010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.354"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..723)
                     /locus_tag="OQQ26_004585"
     CDS             complement(<1..723)
                     /locus_tag="OQQ26_004585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4-like element IS4 family transposase"
                     /protein_id="HCS1859759.1"
                     /translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
                     SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
                     QRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTH
                     AGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGY
                     YSLGLLNAWSLAGEHRHWMIPLR"
BASE COUNT          172 a          199 c          228 g          169 t
ORIGIN      
        1 tctgagaggt atcatccagt ggcggtgttc tcccgccagg ctccaggcat ttaacagtcc
       61 cagtgagtaa taacctttat ccattaacgt cagagtgtta tcgccggttt gttctataag
      121 ttgctcagca agctcatttt cgctgttctt catcgtgccg aaggctgcag ccgtcagcag
      181 atggctggtc agttccatct ggcagaccat tttgacctgc gggtagagcg ccgggttccc
      241 ggcatgtgtc tggcggggga aggctgcatc gttctctggt gtatccggtg tgcgccagaa
      301 cacaccatcg atggccagca gggtcaggcc gcaccagtgc ggatgcggcg tggcgttatg
      361 ccagagctgc gctgttttcg tgaacacgcg gcggacagcc tcacttccca ggcgctggcg
      421 ggcctgaata acggcactgg gggcaacgaa ggggcgattg cccggcagca tgatgtccag
      481 gcgattcaca atctggtgaa gaggttcttt acgctcaagc gccatgccaa caatacacca
      541 gaccatcatt tcgaggggaa gacggcgctt gcgtagcgtt acagtacctg attcggcaag
      601 gcaacgagag atgagttcgg ggtcgaggta atcccccaga gaagtcagtg ggttacgcag
      661 agaatcgtaa cgggatacca gatcaagagc ctgtccaatg tgcataaaaa aatccggaaa
      721 caagtgagcg tttccggatt cttacacagc cactggatcg gtcaactg
//
LOCUS       DAJVTL010000344          763 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.355, whole genome shotgun sequence.
ACCESSION   DAJVTL010000344 DAJVTL010000000
VERSION     DAJVTL010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.355"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            58..240
                     /locus_tag="OQQ26_004586"
     CDS             58..240
                     /locus_tag="OQQ26_004586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001224679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859760.1"
                     /translation="MRKFKIIIETGIAGGDFEDEFEVDDDATPDEIHDEAKDIFFNYC
                     NYSYHEIKDEEEEQNG"
     gene            233..409
                     /locus_tag="OQQ26_004587"
     CDS             233..409
                     /locus_tag="OQQ26_004587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000753063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859761.1"
                     /translation="MADFGSTKYNVSFEEWHELLMDYAELRGGSAADAEAWRDDYEAG
                     KTPVEAYCDEWGDE"
     gene            406..763
                     /locus_tag="OQQ26_004588"
                     /pseudo
     CDS             406..763
                     /locus_tag="OQQ26_004588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016236032.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          244 a          125 c          218 g          176 t
ORIGIN      
        1 tggtttatta gcagtaattt tgtggggatc cctcaggccc gaaagggcgg tagtgaaatg
       61 cgaaagttca aaattattat tgaaacggga atagccggtg gagatttcga ggatgaattc
      121 gaagtggatg atgatgcgac gcctgatgaa atacatgacg aagcaaaaga tattttcttt
      181 aactactgca attactcata tcacgaaata aaagacgaag aggaagaaca aaatggctga
      241 ttttggttca actaaataca acgtcagttt tgaagaatgg catgaactgt taatggacta
      301 tgcagagtta cgtggtggca gtgctgctga tgctgaagca tggcgtgatg attatgaagc
      361 aggaaaaact ccggtcgaag catattgtga tgagtggggc gatgaatgag cgagattaat
      421 tatcaggaag ggcatgaaac ggcggggcaa gcaaaaacag tggcatggcg atatcgctac
      481 gtgaaaaaaa aggcgttacg gactttcagg ggaagtggtg gtctggtgac tggaaatatg
      541 taccgaaaaa agaggattgt aacgacaggc cgaactatga aattcaggcc ttattcactg
      601 ccccgccagt ccaggtgaca tcagaaggac tggttaaagc cgtgcgcttt tatgaacagg
      661 taaagcgtga gaatccacca gtcgaaacag gagcatggaa agacgctgtt gactgggtac
      721 tcaaagaggc ttgctgtgct gtcattctgg gtaaagccga caa
//
LOCUS       DAJVTL010000345          759 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.356, whole genome shotgun sequence.
ACCESSION   DAJVTL010000345 DAJVTL010000000
VERSION     DAJVTL010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.356"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(240..659)
                     /locus_tag="OQQ26_004589"
     CDS             complement(240..659)
                     /locus_tag="OQQ26_004589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309968.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HCS1859762.1"
                     /translation="MVHEDKARKEFASRLALACENAGYEQHGRQAEIARRMKLTPKAV
                     SKWFNGETIPRREKLRELATLIGTTPTYLLGEDTEESGQVRFYQELNPRQKIIIDLLD
                     ELPDSETDELLKTLEEKKQKYNAIYEELARKKKQKAS"
BASE COUNT          173 a          160 c          162 g          264 t
ORIGIN      
        1 ttaaagttga accctgccgt catgttctta cgcctcgggc tggctacttc acccctgacc
       61 actgcctggt aactcgaagt attgccctgc attctgtggg gcggggtggg tggcaggcat
      121 ataatgtact ttgcgttcat tgttgtaaag tgcttttagt acattttgtg tgtaaaaaaa
      181 tgagatggga taaagtgaag cacaaacccg gaggaaggcg ctaccggatt tatgctggtt
      241 taagaggctt tttgtttttt ctttcgtgct aactcttcgt aaattgcatt gtacttctgt
      301 tttttctctt caagagtttt taaaagttca tctgtctcac tgtcagggag ctcgtccaga
      361 aggtcaatga tgattttttg tcttggattt aactcctgat agaaacgtac ctgtccactt
      421 tcttctgtat cctctcccaa aagataggtt ggtgttgttc ctattagtgt tgctaattcc
      481 cttaatttct cccggcgagg aattgtttcg ccattaaacc atttgctaac cgcttttggt
      541 gttaatttca ttcgacgggc aatttctgcc tgccttccat gttgttcata accagcgttt
      601 tcacaggcta gcgcaagcct actggcgaac tctttacgcg ctttatcttc atgaaccata
      661 agttcaatga tattcgctct tgaatgtact gtcagttctg ttatagcatg tactcaaagt
      721 tcacattgtg agggtgatat gaaccagaaa acacttgaa
//
LOCUS       DAJVTL010000346          712 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.357, whole genome shotgun sequence.
ACCESSION   DAJVTL010000346 DAJVTL010000000
VERSION     DAJVTL010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.357"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            73..>712
                     /locus_tag="OQQ26_004590"
     CDS             73..>712
                     /locus_tag="OQQ26_004590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000141344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859763.1"
                     /translation="MTEWLNAHFGADAATYLSLLVGVLALFGIGGGVTYRIRQQNNIK
                     QKAKKTEGDVNQAGRDINQTTNVYHTSNESTEDPVKKKQDEHDLKIIDQILELLPYED
                     TTQWVEQSYLSGIRQDVCLNIEKAEKFSGEKYRLFNTEVNGAKDAFLDAMTAYVDSTL
                     PFMSVDYPNRKPVMLSLPHDWKSKSVESEANFRFHQQNVRETSGGMIARYEDF"
BASE COUNT          220 a          136 c          172 g          184 t
ORIGIN      
        1 gccttttttc gtttctgcgc aagttagctc tgttattata atccttactc acactgtaag
       61 gacatagttc aaatgactga atggcttaat gcacattttg gtgcagacgc agctacctat
      121 cttagcttat tagtcggcgt actggcactg tttggtattg ggggcggtgt tacatataga
      181 atcagacagc aaaacaacat aaaacagaag gcaaagaaaa ccgagggtga tgtgaaccag
      241 gccgggcggg atattaatca gaccaccaac gtttaccaca catccaatga atctactgag
      301 gaccctgtaa aaaaaaagca agatgaacat gatctgaaga taatcgacca gatccttgaa
      361 ttgctgcctt atgaggatac tactcaatgg gttgagcaga gctacctgag cggtatacgg
      421 caagatgttt gcttaaacat tgaaaaagct gaaaaattta gcggtgaaaa gtatcggtta
      481 ttcaatactg aagtgaatgg tgcgaaagac gcttttttgg acgctatgac cgcatacgta
      541 gatagtacgc taccatttat gagtgttgat tacccgaaca gaaagccagt gatgctaagc
      601 cttccccatg actggaagag taagagtgtt gaatcggagg caaacttccg ctttcatcag
      661 caaaatgtgc gtgaaacatc gggggggatg attgcgcgct atgaggattt tg
//
LOCUS       DAJVTL010000347          684 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.358, whole genome shotgun sequence.
ACCESSION   DAJVTL010000347 DAJVTL010000000
VERSION     DAJVTL010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.358"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(82..344)
                     /locus_tag="OQQ26_004591"
                     /pseudo
     CDS             complement(82..344)
                     /locus_tag="OQQ26_004591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000904911.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(496..>684)
                     /locus_tag="OQQ26_004592"
     CDS             complement(496..>684)
                     /locus_tag="OQQ26_004592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HCS1859764.1"
                     /translation="GSISTFVHKIKLTEAIRKLRRTNTPISVISSELGYSSPSYFSKV
                     FFKYLKTYPQNIRKKNGR"
BASE COUNT          170 a          157 c          149 g          208 t
ORIGIN      
        1 cgagcatttt ctgcccgcag tgccgataat tcatcgctgt cagatttgtg aaccatgccc
       61 tgctgtaaat ctccgcatag attatgtctg tttgatctca gtcatccggt gtctggcgag
      121 aagacgcacc acggtggaag ggtgaacccg aaacagacgg gcggcatcag cacctgtttt
      181 ctgccccgat gtgacgagcg agacaatctc tttttgttgc tggggtgtta actttggtcg
      241 ccatccacca acccgtcctg gcgtgccgct gcaagtccac tctttgtccg ttcacgaagc
      301 atggcgcgtt caaattcagc aaaggaacca acgatttgca ccaaatactt tttacgaggt
      361 tcttttcgcc agtcctgtaa ttccatactc aggtgtccat ctatgtcaga tgggcgttta
      421 agttaccaat tatcgcttac ttacggggtg agtatcgtaa aaaagcggct ctgcaagtcc
      481 tcctaattgg tgacattacc gaccattttt cttccttatg ttttgagggt atgtctttaa
      541 atatttaaag aaaactttag aaaaatacga tggtgaactg taacctaact cagatgatat
      601 gacagaaatg ggagtatttg tccttcgtaa tttcctgata gcttctgtaa gctttatttt
      661 atgtacaaat gtacttatag aacc
//
LOCUS       DAJVTL010000348          651 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.359, whole genome shotgun sequence.
ACCESSION   DAJVTL010000348 DAJVTL010000000
VERSION     DAJVTL010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.359"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>651
                     /locus_tag="OQQ26_004593"
     CDS             <1..>651
                     /locus_tag="OQQ26_004593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047234906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30-like element IS30 family transposase"
                     /protein_id="HCS1859765.1"
                     /translation="NLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYK
                     TLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRR
                     SLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELR
                     KSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLA"
BASE COUNT          209 a          152 c          145 g          145 t
ORIGIN      
        1 aatttaccat tgcgaaagct tgttctggaa aagctggaga tgaaatggtc tccagagcaa
       61 atatcaggat ggttaaggcg aacaaaacca cgtcaaaaaa cgctgcgaat atcacctgag
      121 acaatttata aaacgctgta ctttcgtagc cgtgaagcgc tacaccacct gaatatacag
      181 catctgcgac ggtcgcatag ccttcgccat ggcaggcgtc atacccgcaa aggcgaaaga
      241 ggtacgatta acatagtgaa cggaacacca attcacgaac gttcccgaaa tatcgataac
      301 agacgctctc tggggcattg ggagggcgat ttagtctcag gtacaaaaaa ctctcatata
      361 gccacacttg tagaccgaaa atcacgttat acgatcatcc ttagactcag gggcaaagat
      421 tctgtctcag taaatcaggc tcttaccgac aaattcctga gtttaccgtc agaactcaga
      481 aaatcactga catgggacag aggaatggaa ctggccagac atctagaatt tactgtcagc
      541 accggcgtta aagtttactt ctgcgatcct cagagtcctt ggcagcgggg aacaaatgag
      601 aacacaaatg ggctaattcg gcagtacttt cctaaaaaga catgtcttgc c
//
LOCUS       DAJVTL010000349          640 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.360, whole genome shotgun sequence.
ACCESSION   DAJVTL010000349 DAJVTL010000000
VERSION     DAJVTL010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.360"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..606
                     /locus_tag="OQQ26_004594"
     CDS             <1..606
                     /locus_tag="OQQ26_004594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000514028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein mom"
                     /protein_id="HCS1859766.1"
                     /translation="RVETISCWLARTIIQTKHYSRRFVNNSWLHLGVFSGRDLVGVLQ
                     WGYALNPNSGRRVVLETDNRGYMELNRMWLHDDMPRNSESRAISYALKTIRLLYPSVE
                     WVQSFADERCGRAGVVYQASNFDFIGSHESTFYELDGEWYHEITMNAINRGGKRGEYL
                     RANKERAVAHKFNQYRYIRFLNKRAKKRLNTKLFRIQPYPK"
BASE COUNT          171 a          147 c          168 g          154 t
ORIGIN      
        1 cgcgttgaaa ccatatcctg ctggctggcc cgcacaatca ttcagacaaa gcattattcc
       61 cgccgttttg tgaataactc ctggttgcat ctgggcgtat tcagtggacg tgatctggtt
      121 ggtgttcttc agtggggata tgcccttaac cccaactcag ggcgtcgcgt tgtgcttgaa
      181 acggataacc ggggctatat ggaactgaac cgcatgtggc tacacgacga catgccccgc
      241 aactctgaat cacgggccat cagctacgcg ctgaaaacca tcaggttact gtatccgtca
      301 gtggagtggg ttcagtcctt tgcagacgaa cgttgcgggc gtgcaggtgt tgtgtatcag
      361 gcgtcaaatt ttgattttat tggcagccat gaaagcacat tctacgaact ggacggtgag
      421 tggtatcacg aaataacgat gaatgcgatt aatcgtggag ggaagcgcgg cgaatattta
      481 cgagcgaata aggagcgggc cgtggcgcac aaatttaatc aatatcgtta catcaggttc
      541 ctgaacaagc gcgcaaaaaa gcgactaaac actaagctat tcaggattca gccttacccg
      601 aagtgatccc acttaatgaa taaaaaagca gcggttaatg
//
LOCUS       DAJVTL010000350          623 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.361, whole genome shotgun sequence.
ACCESSION   DAJVTL010000350 DAJVTL010000000
VERSION     DAJVTL010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.361"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(41..382)
                     /locus_tag="OQQ26_004595"
     CDS             complement(41..382)
                     /locus_tag="OQQ26_004595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859767.1"
                     /translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
                     FGNYAYLRAEKLGQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVC
                     LFGEMRLFRSA"
BASE COUNT          214 a          130 c          124 g          155 t
ORIGIN      
        1 tattcctttc attcctgaat gtgtaagagc tttatgttgc tcatgccgag cgaaacaagc
       61 gcatttcacc aaacaagcag acaaaaaagg cgatggggta gatcaccatt tcataagcat
      121 tgataggtgc gtttaaaaca ccgataaaca agagaccgat agtgattaac gcaactaact
      181 ggcagatatg ggtaaaaaaa ttatccagtt gcccgagttt ttctgcgcga agatatgcat
      241 agttaccaaa agttgctgtc attaacacgc caagaaaata gccttttcca cttagcaatg
      301 ggcatgagat ccatagccca accagataaa ccagcgcccc gacaacaaat aatagttttg
      361 ccacagtttt tgaggttttc ataacgatct ccatatctac cagcgataca ttacgagtaa
      421 ccaacgaaag acaaaactga aaaatgccat taacaaatga ttttcagaat aaattcatac
      481 taaatattaa ttagtgagat atatagatgt gaattatccc ccacccggtc aggcagggga
      541 taacgtttac gccattaatg gcagaagttg ctgatagagg cgacggaacg tttcacgtcg
      601 tggctgataa gcggcataac gct
//
LOCUS       DAJVTL010000351          610 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.362, whole genome shotgun sequence.
ACCESSION   DAJVTL010000351 DAJVTL010000000
VERSION     DAJVTL010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.362"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            4..>610
                     /locus_tag="OQQ26_004596"
     CDS             4..>610
                     /locus_tag="OQQ26_004596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001603101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859768.1"
                     /translation="MLPSISINNTSATYPESINENNNDEVNGLVQELKNLFNGKEGIS
                     TCIKHLLELIKNAIRVNDDPYRFNINNSSVTYIDIGSNDTDHITIGIDNQEPIELPAN
                     YKDKELVRTIINDNIVEKTHDDINDAEFTDGSIVVSGNEDAIDSNDTADITSGIYNQE
                     PIKPPTNDENKKVGQTITNENIIENTHDINNKEIIFSALKGI"
BASE COUNT          246 a          109 c           93 g          162 t
ORIGIN      
        1 atcatgctac catctatttc aatcaacaat accagcgcaa cttacccaga atccattaat
       61 gaaaataaca atgatgaagt taatggatta gtacaagagc tcaaaaacct ttttaatggt
      121 aaggaaggaa taagcacctg tattaaacat ctacttgagc ttataaaaaa cgccatacga
      181 gtaaacgacg acccttatag atttaatatt aataattcct cagttactta tattgatatt
      241 ggctccaatg atacagacca tattactatt ggtatcgaca accaagaacc aatagaatta
      301 cctgcgaact ataaagacaa agaactcgtc cgtactatca ttaatgacaa catagttgag
      361 aagactcatg atgatataaa tgatgctgaa tttactgatg gtagtatcgt tgttagtggt
      421 aatgaggatg ctattgactc caatgataca gccgatatta ctagtggtat ctataatcaa
      481 gaaccaataa aaccacctac gaacgatgaa aacaaaaaag tcggtcaaac catcaccaat
      541 gaaaatataa tagagaatac tcatgatatc aataacaagg aaataatctt cagcgcatta
      601 aaaggaatat
//
LOCUS       DAJVTL010000352          609 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.363, whole genome shotgun sequence.
ACCESSION   DAJVTL010000352 DAJVTL010000000
VERSION     DAJVTL010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.363"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..351
                     /locus_tag="OQQ26_004597"
     CDS             <1..351
                     /locus_tag="OQQ26_004597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HCS1859769.1"
                     /translation="LELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQTAEVWLAK
                     IHEVGVPVAPLLSVAEAINLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAAT
                     LDQHGEQIRQEFSS"
     gene            complement(407..>609)
                     /locus_tag="OQQ26_004598"
     CDS             complement(407..>609)
                     /locus_tag="OQQ26_004598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HCS1859770.1"
                     /translation="FHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILELL
                     NSVKEHIAELDQEIAVFCQKND"
BASE COUNT          179 a          124 c          145 g          161 t
ORIGIN      
        1 ctggagctta cggaactggt taatgatccc cgatttagca gcaatatttt acgcgtacaa
       61 aaccaggcta ttcttaaaca atatattgag cggacgttaa aaacgcagac agctgaagtt
      121 tggttagcca aaatacatga agttggtgtg cccgtcgcgc cgttattaag tgtggctgag
      181 gccattaatt tgccacaaac tcaggcgaga aatatgttga ttgaagccgg gggaataatg
      241 atgccaggta atccgataaa aatcagcggc tgcgcggacc cgcatgttat gccgggagcg
      301 gcaacgctcg accagcatgg ggaacaaatt cgccaggagt tctcatcata aatgtaagat
      361 gtgctggtaa atagctccca catttgaata ttgtgggagc cgcaatttag tcatttttct
      421 gacagaaaac agcaatctcc tggtccagct ctgcaatgtg ttcttttaca gagttcagca
      481 actcaagaat ttcaggctta ctgtcatctg aaacaggtgt tatttctaac tgatggctaa
      541 tattaatcaa cttttgcaaa ttcaggatgt tagccgcacc gtggatgcga tgaatacact
      601 gatggaaag
//
LOCUS       DAJVTL010000353          565 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.364, whole genome shotgun sequence.
ACCESSION   DAJVTL010000353 DAJVTL010000000
VERSION     DAJVTL010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.364"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>565
                     /locus_tag="OQQ26_004599"
     CDS             <1..>565
                     /locus_tag="OQQ26_004599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013124600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HCS1859771.1"
                     /translation="SVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFK
                     SEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDY
                     DSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATS
                     FLVDFLPILRRTLTRTGFVIDHIHYYA"
BASE COUNT          100 a          190 c          175 g          100 t
ORIGIN      
        1 tttcggttgg cctgtgcctc gtgcatgtcg cctgcgacaa gcgcccttgg ctggaaggac
       61 tgaacgtgga aatggattgg cagatgagcg gcaagccctt gctgctctac ctagacaacg
      121 cggccgagtt caagagcgag gccctgcgcc ggggttgcga gcagcatggc atccggctgg
      181 actatcgccc gctgggacag ccgcactatg gcggcatcgt ggaacggatc atcggcacgg
      241 cgatgcagat gattcacgac gaactgccgg gaacgacctt ctccaaccct gaccagcgcg
      301 gcgactacga ttccgaaaac aaggccgccc tgacgctgcg cgagctagag cgctggctca
      361 cattggcggt cggcacctac cacggttcgg tgcacaacgg cctgctccaa ccgccggccg
      421 cgcgctgggc cgaggccgtg gcgcgtgtcg gcgtaccggc cgtcgtcaca cgcgctactt
      481 cgttcctggt cgattttctg ccgatcctcc ggcgcacgct gacccgcacc ggctttgtca
      541 tcgaccacat ccactactac gccga
//
LOCUS       DAJVTL010000354          557 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.365, whole genome shotgun sequence.
ACCESSION   DAJVTL010000354 DAJVTL010000000
VERSION     DAJVTL010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.365"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..557
                     /locus_tag="OQQ26_004600"
                     /pseudo
     CDS             1..557
                     /locus_tag="OQQ26_004600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611435.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS3-like element IS2 family transposase"
BASE COUNT          133 a          140 c          165 g          119 t
ORIGIN      
        1 ttgatgtctt agggccggag aaacgcagac ggcgtaccac acaggaaaag atcgcaattg
       61 ttcagcagag ctttgaaccg gggatgacgg tctccctcgt tgcccggcaa catggtgtag
      121 cagccagcca gttatttctc tggcgtaagc aataccagga aggaagtctt actgctgtgg
      181 ccgccggaga acaggttgtt cctgcctctg aacttgctgc cgccatgaag cagattaaag
      241 aactccagcg cctgctcggc aagaaaacga tggaaaatga actcctcaaa gaagccgttg
      301 aatatggacg ggcaaaaaag tggatagcgc acgcgccctt attgcccggg gatggggagt
      361 aagcttagtc agccgttgtc tccgggtgtc gcgtgcgcag ttgcacgtca ttctcagacg
      421 aaccgatgac tggatggatg gccgccgcag tcgtcacact gatgatacgg atgtgcttct
      481 ccgtatacac catgttatcg gagagctgcc cacgtatggt tatcgtcggg tatgggcgct
      541 gcttcgcaga caggcag
//
LOCUS       DAJVTL010000355          538 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.366, whole genome shotgun sequence.
ACCESSION   DAJVTL010000355 DAJVTL010000000
VERSION     DAJVTL010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.366"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>538
                     /locus_tag="OQQ26_004601"
     CDS             <1..>538
                     /locus_tag="OQQ26_004601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HCS1859772.1"
                     /translation="GAVKITTSLVHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQ
                     TSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEITQQVAAVEAK
                     AEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLL
                     ITDVNMPNIDGFELTRKLR"
BASE COUNT          182 a          110 c          113 g          133 t
ORIGIN      
        1 ggtgcagtaa aaattacgac ctccctggtt cacattgatg acaaccacgc tgtaatcaaa
       61 atgacgatta tggattctgg aagtggatta tcacaggaag aacaacaaca actgtttaaa
      121 cgttatagcc aaacaagtgc aggtcgtcag caaacaggtt ctggtttagg cttaatgatc
      181 tgcaaagaat taattaaaaa catgcagggt gatttgtcat tagaaagtca tccaggcata
      241 ggaacaacat ttacgatcac aatcccggta gaaattaccc aacaagtggc ggctgtcgag
      301 gcaaaagcag aacaacctat cacactccct gaaaagttga gcatattaat cgcggatgat
      361 catccgacca acaggctatt actcaaacgc cagctaaatc tattaggata tgatgttgac
      421 gaagccactg atggtgtgca agcgctacac aaagtcagta tgcaacatta tgatctgctt
      481 attactgacg ttaatatgcc gaatatagat ggttttgagt tgactcgcaa actccgtg
//
LOCUS       DAJVTL010000356          513 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.367, whole genome shotgun sequence.
ACCESSION   DAJVTL010000356 DAJVTL010000000
VERSION     DAJVTL010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.367"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            310..>513
                     /locus_tag="OQQ26_004602"
     CDS             310..>513
                     /locus_tag="OQQ26_004602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HCS1859773.1"
                     /translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNK
                     ITAGEVKHDITESMLELATDVCRD"
BASE COUNT          147 a          136 c           95 g          135 t
ORIGIN      
        1 gcacccgcag ttatcttacc cttgcttagc aaaatagctg tttatttata cagtaagtcc
       61 tgtttcggac ttctcactcc ccatttgatc aactgaagct gagcccgttt tttctgcatg
      121 cctcaatcgt caaaattctt cgccaccagc cagccgtgcc ataacttgtc acattgcaaa
      181 agtagccaaa ttgcttcagt cacaatcaat tcaccatcac caaaaaaaag aaacattcca
      241 gaacttccgc atctcgccca gccgctccca cttctatact gaatagaaaa cgcaacataa
      301 gagaaaccta tgccattacc cgattttcat gtttctgaac cttttaccct cggtattgaa
      361 ctagaaatgc aggtggttaa tccgccgggc tatgacttaa gccaggactc ttcaatgctg
      421 attgacgcgg ttaaaaataa gatcacggcc ggagaggtaa agcacgatat caccgaaagt
      481 atgctggagc tggcgacgga tgtttgccgt gat
//
LOCUS       DAJVTL010000357          505 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.368, whole genome shotgun sequence.
ACCESSION   DAJVTL010000357 DAJVTL010000000
VERSION     DAJVTL010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.368"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            38..>505
                     /locus_tag="OQQ26_004603"
     CDS             38..>505
                     /locus_tag="OQQ26_004603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004229383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HCS1859774.1"
                     /translation="MRWRHPRLGLLPPGQFLPLAESFGLMPEIGAWVLGEACRQMHKW
                     QGPAWQPFRLAINVSASQVGPTFDDEVKRVLADMALPAELLEIELTESVAFGNPALFA
                     SFDALRAIGVRFAADDFGTGYSCLQHLKCCPITTLKIDQSFVARLPDDARDQTI"
BASE COUNT           86 a          166 c          153 g          100 t
ORIGIN      
        1 tctgcgcgat caccggatcg ctggcgcgga agcgttgatg cgctggcggc atccgaggct
       61 tggcctgttg ccgcccggcc agttcctgcc gctggccgag tcgttcggcc tgatgccgga
      121 aataggcgcg tgggtgctgg gcgaggcctg tcgccagatg cacaagtggc aaggaccggc
      181 atggcaaccg ttccgtcttg ccatcaatgt gtccgccagc caggttgggc caacgttcga
      241 cgacgaggta aagcgggtgc tggccgatat ggccctgccc gccgagcttc tggagatcga
      301 actgaccgaa tcggtcgcat tcggcaatcc agccctgttc gccagtttcg acgccttgcg
      361 cgccatcggc gtgcgcttcg ccgccgacga cttcggcacc ggctattcct gcctgcaaca
      421 tctgaaatgc tgccccatca ccacattgaa aatcgaccaa tcctttgtcg ccaggctccc
      481 ggatgatgcc cgtgaccaaa ctatc
//
LOCUS       DAJVTL010000358          499 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.369, whole genome shotgun sequence.
ACCESSION   DAJVTL010000358 DAJVTL010000000
VERSION     DAJVTL010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.369"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            156..452
                     /locus_tag="OQQ26_004604"
     CDS             156..452
                     /locus_tag="OQQ26_004604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA breaking-rejoining protein"
                     /protein_id="HCS1859775.1"
                     /translation="MSIIECEIELDVINDSLAEFKCGNTLHSFIQISQKENVTVIIDG
                     CYVLRTFDCCVCAIKEIALLTARIEEADKKYGISYQRLKELSHIASSVRFFYAI"
BASE COUNT          180 a           82 c           96 g          141 t
ORIGIN      
        1 ggaaccatga tgaggaaaaa gaaacgcaaa tattgtagtg aaatctgtgc cgaaaaagac
       61 cagatggcac acgaacttta attaactgaa tattcgaaac tgaatttatg ccagcaatgg
      121 cagggattca ctcaacctta aaaaaggaaa cagcaatgag tattattgaa tgtgaaattg
      181 aacttgatgt tattaacgat tctctcgccg aatttaaatg tgggaataca ttacatagtt
      241 tcattcagat ttcccaaaaa gaaaacgtca cggtaattat tgatggctgt tacgttctga
      301 gaacatttga ttgttgtgta tgtgccatta aagaaattgc attactcaca gctcgcattg
      361 aagaggctga caagaaatac ggtatcagtt atcaacgact gaaagaactc tctcatatcg
      421 catcatcagt tcgtttcttt tatgcaatct gaatatgagt tgaggttaaa aaacaatgag
      481 caccgataaa caagtttac
//
LOCUS       DAJVTL010000359          483 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.371, whole genome shotgun sequence.
ACCESSION   DAJVTL010000359 DAJVTL010000000
VERSION     DAJVTL010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.371"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..145)
                     /locus_tag="OQQ26_004605"
     CDS             complement(<1..145)
                     /locus_tag="OQQ26_004605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000420980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HCS1859776.1"
                     /translation="MELKKLMEHISVIPDYRQAWKVEHKLSDILLLTICAVISGAEGW
                     EDIE"
     gene            complement(249..>483)
                     /locus_tag="OQQ26_004606"
     CDS             complement(249..>483)
                     /locus_tag="OQQ26_004606"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859777.1"
                     /translation="IETSNPYHAQYILRRRDDYLVLFDRDALSCRFFYDAFPGMRLRH
                     QVTGDTDDDRLAHSPADRMYTGKDHQKYTFCTK"
BASE COUNT          137 a          104 c          107 g          135 t
ORIGIN      
        1 cctctatatc ttcccaacct tccgcaccag aaataacggc acaaatagtc aacagtagaa
       61 tatccgataa tttatgctcc actttccagg cttgtctgta atcgggaata acagaaatat
      121 gttccatcaa ttttttaagt tccattttgt tctccttaat tatgtaagga gtatttgatc
      181 atgtataagc aataaaaaac agcttcaggt aatgaggaat atctcaattt ttaaatataa
      241 aatgcgaatt atttagtaca aaaagtgtac ttctgatgat ctttccctgt atacatccgg
      301 tctgcggggc tgtgtgccag gcggtcatcg tcggtatcgc cggtcacctg gtggcgcaga
      361 cgcattcccg gaaaggcgtc ataaaagaag cggcagctca gggcatcacg gtcgaacagc
      421 accaggtaat catcgcggcg gcgcaggatg tactgggcgt gatacgggtt actggtttcg
      481 ata
//
LOCUS       DAJVTL010000360          468 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.373, whole genome shotgun sequence.
ACCESSION   DAJVTL010000360 DAJVTL010000000
VERSION     DAJVTL010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.373"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(38..>468)
                     /locus_tag="OQQ26_004607"
     CDS             complement(38..>468)
                     /locus_tag="OQQ26_004607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HCS1859778.1"
                     /translation="RRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPE
                     APLWVAVNERDQPVGFMLLSGQHMDALFIDPDVCGCGVGRMLVEHALSMAPELTTNVN
                     EQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVEE"
BASE COUNT          118 a          163 c           96 g           91 t
ORIGIN      
        1 cgtcttctcc agcctgggca ggcacggcag gggcagctta ttcctccaca tacgccagat
       61 tcagcaacgg atacggtttc cccaaatcgt ccacctcaga gcgtcccgta accttaaaac
      121 ccaccttctt atagaaccca accgcctgct cattttgctc attaacgttg gttgtcagtt
      181 ccggtgccat cgagagcgca tgctccacca gcatccgacc cacgccgcag ccgcacacat
      241 caggatcgat aaacagcgca tccatatgct gcccacttaa caacataaac ccaaccggct
      301 gatcccgttc attaaccgcg acccacaacg gtgcttccgg cagaaaggaa cgaaccagct
      361 cttccagctc ggcccgatac tctgctgata aaaaatcgtg agtggcatcg acagaacggc
      421 accaaatcgc aaccagttcc tccccttcct catgccgtga gcggcgaa
//
LOCUS       DAJVTL010000361          444 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.375, whole genome shotgun sequence.
ACCESSION   DAJVTL010000361 DAJVTL010000000
VERSION     DAJVTL010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.375"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(273..>444)
                     /locus_tag="OQQ26_004608"
     CDS             complement(273..>444)
                     /locus_tag="OQQ26_004608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
                     /protein_id="HCS1859779.1"
                     /translation="KVLEYFINNGLVDVNKKFQKVNSGDTMLDNAMKSKDSKMIDFLL
                     KNGAILGKRFEI"
BASE COUNT          126 a           98 c           82 g          138 t
ORIGIN      
        1 tcccgtaaag acgggagtca agttcccgct ccgacataac tgcgtgcaat ggattttgaa
       61 ggaaccgtca gcccattccc cggaggcaaa catgggctgg caaaagtgta gcggtattag
      121 gcacagctat ttaggaaaga gggaccatct ccatctcatt aaatggacca cgccagacaa
      181 ttcactgcca tgctgatgct gcactgtggg gacagaatca ctcatgatga cttcgataat
      241 cgacgacatt attatttggc cgagctttta ggtcatatct caaatcgttt gcctaatatt
      301 gctccatttt ttaataaaaa atcaatcatt tttgaatctt tgcttttcat tgcattgtca
      361 agcatagtgt ccccactatt tactttttga aattttttgt ttacatcaac caatccatta
      421 ttgataaaat attctagcac ttta
//
LOCUS       DAJVTL010000362          434 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.376, whole genome shotgun sequence.
ACCESSION   DAJVTL010000362 DAJVTL010000000
VERSION     DAJVTL010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.376"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>434
                     /locus_tag="OQQ26_004609"
     CDS             <1..>434
                     /locus_tag="OQQ26_004609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS5-like element ISSfl7 family transposase"
                     /protein_id="HCS1859780.1"
                     /translation="GTKIHLATDGSGLPLNIVLSPGQAHESQFAQRLLDGIGVQRQNG
                     SMKRRGHAVLADKAYSGRALRNELKNNGIKAVIPRKSNEKMASDGRAQLDRDAYCNRN
                     VVERCFGRLKEYRRIATRYDKTARNYLAMVKLGCIRLFYQRL"
BASE COUNT          121 a          106 c          120 g           87 t
ORIGIN      
        1 tggcaccaaa atccatctgg caacagacgg aagtggcctc ccgttaaata tcgtgctaag
       61 ccccggacaa gctcatgaaa gccagttcgc gcaacgactt ctggacggga ttggcgttca
      121 gcgtcagaac ggcagcatga aacgccgtgg acatgcggta ctggctgata aagcgtattc
      181 agggcgcgca ttgcgcaacg agctgaaaaa taacggtata aaggcagtaa tcccccgaaa
      241 gtcaaatgag aaaatggcat cggatggacg tgcacagctt gatcgtgatg cgtactgcaa
      301 tcgtaatgtc gttgaacggt gctttgggcg gctgaaagaa tatcgccgca tcgccacgcg
      361 ttacgacaaa acggcgagaa attacctggc gatggtgaaa ctgggctgca tccgactctt
      421 ttatcaacgc ttac
//
LOCUS       DAJVTL010000363          431 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.377, whole genome shotgun sequence.
ACCESSION   DAJVTL010000363 DAJVTL010000000
VERSION     DAJVTL010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.377"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..427
                     /locus_tag="OQQ26_004610"
     CDS             <1..427
                     /locus_tag="OQQ26_004610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859781.1"
                     /translation="QSKSAKEAWLIFSSTNDFRAREIIKLYSRRMQIEQNFRDEKNGR
                     FGFGLRASKSRSTGRILVLSLLATLSTIVMWLLGYHAENKGLHLKYQANSIKSRRVIS
                     YLTLAKNVLRHSPLILRRTVLSTVLNHLSRTYRNMVLVY"
BASE COUNT          133 a           90 c          100 g          108 t
ORIGIN      
        1 acagagcaaa tcagcaaaag aagcctggtt gatcttcagc agtacaaatg acttcagagc
       61 gcgagaaatc atcaagttat acagtcggcg aatgcagata gagcaaaact ttcgtgatga
      121 aaagaacggg cgcttcggat ttggtcttcg ggccagcaaa agtcgttcaa caggaagaat
      181 tctggttctg agtctgctgg caacgttgag cactatcgta atgtggttac tcggttatca
      241 cgctgaaaat aaagggttac acctgaaata tcaggctaac agcattaaat cccggcgggt
      301 tatctcatat ctgacgttag cgaagaatgt tcttcgacac tcgccactta ttttaagacg
      361 aacagtactg agcacagttc taaaccatct gtccagaacc taccgaaata tggtgctggt
      421 ttattagcag t
//
LOCUS       DAJVTL010000364          425 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.378, whole genome shotgun sequence.
ACCESSION   DAJVTL010000364 DAJVTL010000000
VERSION     DAJVTL010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.378"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..401)
                     /locus_tag="OQQ26_004611"
     CDS             complement(<1..401)
                     /locus_tag="OQQ26_004611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001335846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1859782.1"
                     /translation="MKGGWNFYQYPLNPVQYIDSMGMASKYGHLNNGGYGAKPSKPPT
                     PDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQ
                     DDPQYPGMETKTASDYLPQTNWSTTQLPPGYT"
BASE COUNT           99 a           94 c           96 g          136 t
ORIGIN      
        1 gtatatcctg gtggtaattg agttgttgac caatttgtct gtggcaggta atcacttgct
       61 gtctttgtct ccatccctgg atactgggga tcatcctgcg gcgtacaagt cagattgggt
      121 tttacccact tcctgcaata cagtgtgtaa tcgtaagggc ttaatgctct gaagaatgtt
      181 ttgaaaacat taggcgcact actggcctgg tcaataggat atggcagtct taattgtttc
      241 gctatgtctg gcaacttact tggatcgggc gtaggcggtt tgctgggttt cgctccatat
      301 ccgccattat ttaagtgtcc atatttagat gccatcccca ttgaatctat atactgaacc
      361 ggattcaacg gatactgata aaaattccat ccccccttca gcccaatcgg atcctgagtg
      421 atata
//
LOCUS       DAJVTL010000365          409 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.379, whole genome shotgun sequence.
ACCESSION   DAJVTL010000365 DAJVTL010000000
VERSION     DAJVTL010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.379"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..380)
                     /locus_tag="OQQ26_004612"
     CDS             complement(<1..380)
                     /locus_tag="OQQ26_004612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859783.1"
                     /translation="MYDITAAIRFAQAGGLYTYNAGFAGAIGGYAKGAILAGVATTAV
                     WLNTTDDNLTDPEGSDSAGWVNLLEDPKRIFLRQKNNLSDLQNKGTARDNLQVYSKEQ
                     SDQRYVHQEGDTLSGGLTFENDSIL"
BASE COUNT           92 a          110 c           96 g          111 t
ORIGIN      
        1 aggattgagt cgttttcaaa agtaagtcca ccggacaagg tatcgccttc ctgatgaaca
       61 tagcgttgat ctgactgctc tttactgtaa acctgaagat tatcccgtgc cgtcccttta
      121 ttctgaaggt ctgacagatt gttcttctgc cgcaggaata tccttttcgg atcctcaaga
      181 agatttaccc agcccgcact gtcggagcct tcaggatcgg tcaggttatc gtctgtggta
      241 ttcagccaga ccgctgttgt tgcgactccg gcgagaatgg ctccttttgc atatccacca
      301 atggcccccg caaaaccggc attatacgtg tacaaaccgc cagcctgggc gaaccgtatt
      361 gctgcggtaa tatcgtacat cagaccgtta aaatccttgc cgtgtggcg
//
LOCUS       DAJVTL010000366          406 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.381, whole genome shotgun sequence.
ACCESSION   DAJVTL010000366 DAJVTL010000000
VERSION     DAJVTL010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.381"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            175..>406
                     /locus_tag="OQQ26_004613"
     CDS             175..>406
                     /locus_tag="OQQ26_004613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859784.1"
                     /translation="MKKIIFSNESAVCDELMIHFPCQPLPHISNDITGLEELDIVYNF
                     FQKKQWNEIANNLKIKDDSYALELGITFLPEKV"
BASE COUNT          147 a           60 c           84 g          115 t
ORIGIN      
        1 ttgcgctcct cagatgctga gaaaagaaat attgagacgg tacgagataa atttggcgtg
       61 cgcttcggtc agaaaacata ttaataatca gtgctttggt ggtggagata aggcccatat
      121 ggaagaagag aataaagcat ataaaacagc agctgattgc agtggcttaa taaaatgaaa
      181 aaaataattt tctctaacga gagtgcagtc tgtgatgaac ttatgattca tttcccatgc
      241 cagccattac ctcatatttc aaatgatatt acagggctgg aggaactgga tattgtatat
      301 aattttttcc aaaagaaaca atggaatgaa atagccaaca atttaaaaat aaaggatgat
      361 tcttatgctt tagagttagg aattacattc ctccctgaga aagtat
//
LOCUS       DAJVTL010000367          397 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.383, whole genome shotgun sequence.
ACCESSION   DAJVTL010000367 DAJVTL010000000
VERSION     DAJVTL010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.383"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>397
                     /locus_tag="OQQ26_004614"
     CDS             <1..>397
                     /locus_tag="OQQ26_004614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859785.1"
                     /translation="PVESRRQAKGTRFLWQHSDKWMTESRQEKLIWLRAQMKLTSLCW
                     ALKELAKDIWSRPWSEERRNDWQRWLSLAANSDVPMMKNVAKTIGKRLYGILNAMRHG
                     VSNGNAEALNSKIRLLRIKAKGYRNRERFK"
BASE COUNT          118 a           89 c          126 g           64 t
ORIGIN      
        1 cctgttgaaa gtcgtcgtca ggcaaaggga actcgcttcc tgtggcagca cagcgataaa
       61 tggatgaccg aatccaggca ggaaaagctg atatggctgc gtgcgcagat gaagctgacg
      121 agcctgtgct gggcgctgaa agaactggca aaggatatct ggagcagacc atggagcgag
      181 gaaagacgca acgactggca gagatggctg tcgctggcgg ccaacagtga cgtccccatg
      241 atgaagaatg tggctaaaac gatagggaaa aggttgtacg gtatcctgaa cgccatgcgc
      301 catggcgtat caaacggaaa tgcggaagca ctgaacagca agatcaggct gctgagaata
      361 aaagccaagg gctaccgcaa ccgggagcgc tttaagc
//
LOCUS       DAJVTL010000368          389 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.384, whole genome shotgun sequence.
ACCESSION   DAJVTL010000368 DAJVTL010000000
VERSION     DAJVTL010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.384"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            100..389
                     /locus_tag="OQQ26_004615"
                     /pseudo
     CDS             100..389
                     /locus_tag="OQQ26_004615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308856.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
BASE COUNT          110 a           90 c          106 g           83 t
ORIGIN      
        1 acgcgtgaac ctgaaaacaa aaatactgca tctcagacac aggagcagac tacggctcag
       61 gttgccacaa ccgtgaccac cacaaatgca ccttccgcag atgaaagcag tatccgtgcg
      121 caggtactgg cagagcaaaa agcacgtgtg agtggtatta atgaactgtt tggtatgttt
      181 ggcgggcgtt atcagacatt gcaggccagt tgtctttccg agccggagtg ctcgcttgag
      241 caggcccgtg agaaattact taacgaaatg ggtaaggaat tttcaccatc aaataaaaat
      301 accccggccc atatttatgc cggaaacggt aattttgtgg gggacgggat ccgccaggcg
      361 ctgatggcgc gtgccgggtt tgaaaaaac
//
LOCUS       DAJVTL010000369          383 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.385, whole genome shotgun sequence.
ACCESSION   DAJVTL010000369 DAJVTL010000000
VERSION     DAJVTL010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.385"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
BASE COUNT          147 a           60 c           75 g          101 t
ORIGIN      
        1 cactgagatg acgcttacaa ttcttttggt ttctgtaata agtaatctga catcccccgt
       61 gcccagaaga ggagagggat atcaagccca agggttaata attgatacta cggttaaaat
      121 tgccttcagt aaaggaaacg tgattaaatt caggggattt cagagtgaaa accatacaac
      181 atattaaaat ctgttcattt agctataata catacaagaa agtgtccagt tagataatgt
      241 tatctaaata accacagata aaaacgcaca taattggggg ggggggatga aaatacctga
      301 agcagtaaat catattaatg ttcagaataa tattgatctt gttgatggaa aaacgaatcc
      361 gaataaagca acaaaagcat tac
//
LOCUS       DAJVTL010000370          379 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.386, whole genome shotgun sequence.
ACCESSION   DAJVTL010000370 DAJVTL010000000
VERSION     DAJVTL010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.386"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..338)
                     /locus_tag="OQQ26_004616"
     CDS             complement(<1..338)
                     /locus_tag="OQQ26_004616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047234906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HCS1859786.1"
                     /translation="MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDT
                     GGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRR
                     YYKAVDANNRA"
BASE COUNT           88 a          102 c           79 g          110 t
ORIGIN      
        1 gctcggttat tagcatcaac agctttgtaa tagcgtctgc cccgattacg ctgaacttca
       61 cgtgagatcg tcgaaggact gcgattcagc gcagtagcta tcgcacgaat gctcattttg
      121 gctgacaaac cagctcgtat ctcctcgcgc tcagacagtg tcaggtgagc tacagcccgc
      181 ttacgctcat ggggttttat gccgccagta tcccttaaca tagtgaagat cgttccgggt
      241 tttgaaccca ggatattcgc tatttcactg aagcctgttc cgttcttcca tagttcaaaa
      301 acagaggctt tttcctctgc tgtaaatgtt cgtctcattc aaaaaacctc cgcaacccca
      361 tgttttcaca taactgttg
//
LOCUS       DAJVTL010000371          377 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.387, whole genome shotgun sequence.
ACCESSION   DAJVTL010000371 DAJVTL010000000
VERSION     DAJVTL010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.387"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>377
                     /locus_tag="OQQ26_004617"
     CDS             <1..>377
                     /locus_tag="OQQ26_004617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HCS1859787.1"
                     /translation="TLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVL
                     HALNPMWAVHFFLEYKTVSFIALGAVVLSITGGEALYADMGHFGKFPIRLAWFTVVLP
                     SLTLNYFGQGALLLKNPEAIKNP"
BASE COUNT           78 a           79 c          104 g          116 t
ORIGIN      
        1 cacattatta tttatgattc aaaaacatgg cacggctatg gtcggtaagc tgtttgcgcc
       61 gatcatgctg acctggtttt tgattctggc agggctgggg ttacgtagca ttattgctaa
      121 cccggaagtg ctgcatgcac tgaatccgat gtgggcggtg catttcttcc ttgaatacaa
      181 aacggtttct tttattgcat taggggcagt agtgctgtcg attacggggg gcgaggcgct
      241 gtatgctgat atggggcact ttggtaagtt ccctattcgc ctggcgtggt tcaccgtcgt
      301 attaccttcc ttgaccctta attacttcgg tcagggagcg ttgttgttaa agaacccgga
      361 agcgattaag aacccgt
//
LOCUS       DAJVTL010000372          376 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.388, whole genome shotgun sequence.
ACCESSION   DAJVTL010000372 DAJVTL010000000
VERSION     DAJVTL010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.388"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(87..>376)
                     /locus_tag="OQQ26_004618"
     CDS             complement(87..>376)
                     /locus_tag="OQQ26_004618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HCS1859788.1"
                     /translation="FGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSA
                     RLQYGCTWVNTHFMLVSEIPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH"
BASE COUNT          104 a          108 c           71 g           93 t
ORIGIN      
        1 aatgtaatca ttctaatact taaccgccat taaactcaga acctaaaacg atagtggccg
       61 tcctataaca gccactaaca tctaacttaa tgtttaacca tgacgtggcg gacaacggtg
      121 taatcctcca gcccataaag tgacatatcc ttgccgtaac cagaaagttt ctgcccaccg
      181 tgcggtattt cacttaccag catgaaatgg gtattgaccc aggtacaacc atattgcagc
      241 cgtgcgctga cgcgatgcgc cctgcccaca tctttcgtcc ataccgaaga tgcaagtccg
      301 tactggctgt cattcgccca gttcaccacc tgttcttcgt tgtcgaaggg cgtaacactc
      361 actactggac caaata
//
LOCUS       DAJVTL010000373          374 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.390, whole genome shotgun sequence.
ACCESSION   DAJVTL010000373 DAJVTL010000000
VERSION     DAJVTL010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.390"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>374
                     /locus_tag="OQQ26_004619"
     CDS             <1..>374
                     /locus_tag="OQQ26_004619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416774.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859789.1"
                     /translation="AYASEEPPFFRSDEMGSEVHAASLERPVKLMLALEMIGYYDSAP
                     GSQNYPYPAMSWLYPDRGDFIAVVGRMQDINAVRQVKAALLSSQDLSVYSMNAPGFIP
                     GIDFSDHLNYWQHDIPAVMITD"
BASE COUNT           85 a           92 c           93 g          104 t
ORIGIN      
        1 cgcctatgcg tcggaagaac cgcccttctt tcgtagcgat gaaatgggga gcgaggtgca
       61 tgcagcttcg cttgagcgtc cagtgaaatt aatgttagca ctggagatga ttggctatta
      121 cgactctgcg cctggaagcc agaattaccc ttacccggca atgtcctggc tttatcccga
      181 tcggggagac tttattgccg tggtcggcag aatgcaggat atcaacgccg ttcgtcaggt
      241 aaaagcggca ttgttgtcat ctcaggattt atctgtttat tctatgaatg ccccagggtt
      301 tattcccggc attgatttct ccgaccacct taattattgg caacacgata ttcccgccgt
      361 aatgattacc gaca
//
LOCUS       DAJVTL010000374          373 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.391, whole genome shotgun sequence.
ACCESSION   DAJVTL010000374 DAJVTL010000000
VERSION     DAJVTL010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.391"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>373
                     /locus_tag="OQQ26_004620"
     CDS             <1..>373
                     /locus_tag="OQQ26_004620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HCS1859790.1"
                     /translation="VETATGEQAKMQRRSLADALQQSGGEDGGDVVFPPVLVQMLDRL
                     ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLVLIST
                     EGATEWCAEYDEWGNLLNEENP"
BASE COUNT           84 a          102 c          130 g           57 t
ORIGIN      
        1 gttgaaaccg ccaccggtga gcaggcgaaa atgcagcgcc gcagcctggc ggatgccctt
       61 cagcagtccg gcggcgaaga cggtggtgat gtggtgttcc cgccggtgct ggtgcagatg
      121 ctcgaccgac tggaaagtga aatcctggct gaccgggtga gtgaggaaag ccgccgctgg
      181 ctggcatcgt gcggcctgac ggtggagcag atgcaaaacc agatggaccc ggtgtacacg
      241 ccggcgcgaa aaatccacct gtaccactgc gaccatcgcg gcctgccgct ggtgcttatc
      301 agcacggaag gggcaacaga atggtgcgca gaatacgatg agtggggcaa cctgctgaat
      361 gaagagaacc cgc
//
LOCUS       DAJVTL010000375          372 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.392, whole genome shotgun sequence.
ACCESSION   DAJVTL010000375 DAJVTL010000000
VERSION     DAJVTL010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.392"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            1..372
                     /locus_tag="OQQ26_004621"
                     /pseudo
     CDS             1..372
                     /locus_tag="OQQ26_004621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS1-like element IS1B family transposase"
BASE COUNT           81 a           98 c          116 g           77 t
ORIGIN      
        1 gccgggcaac cgcccgcatt atgggcgttg gcctcaacac gattttccgc catttaaaaa
       61 actcaggccg cagtcggtaa cctcgcgcat acagccgggc agtgacgtca tcgtctgcgc
      121 ggaaatggac gaacagtggg gatacgtcgg ggctaaatcg cgccagcgct ggctgtttta
      181 cgcgtatgac aggctccgga agacggttgt tgcgcacgta ttcggtgaac gcactatggc
      241 gacgctgggg cgtcttatga gcctgctgtc accctttgac gtggtgatat ggatgacgga
      301 tggctggccg ctgtatgaat cccgcctgaa gggaaagctg cacgtaatca gcaagcgata
      361 tacgcagcga at
//
LOCUS       DAJVTL010000376          359 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.394, whole genome shotgun sequence.
ACCESSION   DAJVTL010000376 DAJVTL010000000
VERSION     DAJVTL010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.394"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>359
                     /locus_tag="OQQ26_004622"
     CDS             <1..>359
                     /locus_tag="OQQ26_004622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859791.1"
                     /translation="LDRLSDTVSARNTSGFREQVAAWLEKLSASAELRQQSFAVAADA
                     TESCEDRVALTWNNLRKTLLVHQASEGLFDNDTGALLSLGREMFRLEILEDIARDKVR
                     TLHFVDEIEVYLAFQTML"
BASE COUNT           77 a          104 c           91 g           87 t
ORIGIN      
        1 cttgaccgcc tttccgatac cgtctctgca cgcaatacct ccggattccg tgaacaggtc
       61 gctgcatggc tggaaaaact cagtgcctct gcggagcttc gacagcagtc tttcgctgtt
      121 gctgctgatg ccactgagag ctgtgaggac cgtgtcgcgc tcacatggaa caatctccgg
      181 aaaaccctcc tggtccatca ggcatcagaa ggccttttcg ataatgatac cggcgctctg
      241 ctctccctgg gcagggaaat gttccgcctc gaaattctgg aggacattgc ccgggataaa
      301 gtcagaactc tccattttgt ggatgagata gaagtctacc tggccttcca gaccatgct
//
LOCUS       DAJVTL010000377          359 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.395, whole genome shotgun sequence.
ACCESSION   DAJVTL010000377 DAJVTL010000000
VERSION     DAJVTL010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.395"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..199)
                     /locus_tag="OQQ26_004623"
     CDS             complement(<1..199)
                     /locus_tag="OQQ26_004623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001293516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859792.1"
                     /translation="MSENILWGDLETYCEIPITNGTHAYAEGVEVMLFAWAINDEPVN
                     VWDITAGGGIPHGLYEAIAAPE"
BASE COUNT           86 a           85 c          104 g           84 t
ORIGIN      
        1 tttcaggggc tgcgattgct tcgtataagc cgtgtggaat accaccaccg gcagtgatat
       61 cccacacgtt tacgggctcg tcgttgatag cccatgcgaa cagcatcact tcaacgcctt
      121 cggcatacgc atgggtaccg ttcgtaatag ggatttcgca ataggtttcc aggtcgcccc
      181 agagaatgtt ttcagacaag acagggtcct ccgtggacta aacggtgata aaaagcccct
      241 ggctgagcag gggcggattg aatgattaac gaggtaaagt gggtggaata tatctgccga
      301 tgcggtcttc tatggtcggc agagcacaca tgctgtcgct gaagcgtgag gtagcctga
//
LOCUS       DAJVTL010000378          358 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.396, whole genome shotgun sequence.
ACCESSION   DAJVTL010000378 DAJVTL010000000
VERSION     DAJVTL010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.396"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(1..187)
                     /locus_tag="OQQ26_004624"
                     /pseudo
     CDS             complement(1..187)
                     /locus_tag="OQQ26_004624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706649.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(138..>358)
                     /locus_tag="OQQ26_004625"
     CDS             complement(138..>358)
                     /locus_tag="OQQ26_004625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708022.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HCS1859793.1"
                     /translation="IRLVRGRSYRGSRLGPVGISAPCTPTGTHIVYPQYFITGCSEHS
                     LPGSYCALSGVPDTYVSGAMLGLFIRTS"
BASE COUNT           87 a           95 c           91 g           85 t
ORIGIN      
        1 cccgtcggag cgacatcatc agcggtggct gtgtagggga ctgcctggtc cctgtcgtca
       61 aaaaaacgtc acagtctact gcgccacttt cggtataacg gggattaatg atttttttaa
      121 tttccacagt gcattcctca cgatgtgcga ataaaaagcc caagcattgc gccagagaca
      181 tatgtatccg gcaccccgga cagggcgcaa tatgaccccg gtaatgaatg ctctgaacat
      241 cccgtaatga aatattgtgg gtatactata tgcgttccgg tgggagtaca gggcgctgaa
      301 atccccaccg gtcccagtcg tgagcctctg tatgaccgcc ccctgacaag tctgatgt
//
LOCUS       DAJVTL010000379          358 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.397, whole genome shotgun sequence.
ACCESSION   DAJVTL010000379 DAJVTL010000000
VERSION     DAJVTL010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.397"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>358
                     /locus_tag="OQQ26_004626"
     CDS             <1..>358
                     /locus_tag="OQQ26_004626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859794.1"
                     /translation="LPGLAMRRIADLHAGEAKTDARDAAIIAEAARTLPHALRTLKLA
                     DEQIAELSMLCGFDDDLAAQTTQASNRIRGLLTQIHPALERVLGPRLEHPAVLDLLQR
                     YPSPEKLASLGEKKLAA"
BASE COUNT           76 a          124 c           91 g           67 t
ORIGIN      
        1 ctccctggac tggccatgcg ccgcatagcc gacttacacg ccggtgaagc taaaactgat
       61 gctcgtgacg ctgccatcat tgccgaagct gcccgtaccc tgcctcacgc gctacgcacg
      121 ctgaaactgg ctgacgagca aatcgccgaa ctctccatgc tctgcggctt cgatgatgat
      181 cttgccgcac agacaacgca ggccagcaac cgtatccgcg gccttctgac ccagatacat
      241 ccggcactgg agcgcgttct cggtccgaga cttgagcacc cggcggtact cgatcttctc
      301 cagcgatatc cctcaccaga aaaactcgct tcgctgggtg agaagaagct ggcagccc
//
LOCUS       DAJVTL010000380          357 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.398, whole genome shotgun sequence.
ACCESSION   DAJVTL010000380 DAJVTL010000000
VERSION     DAJVTL010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.398"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            119..>357
                     /locus_tag="OQQ26_004627"
     CDS             119..>357
                     /locus_tag="OQQ26_004627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859795.1"
                     /translation="MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDE
                     NKLRSLISDLKQHGQILLVVDQPATIGALPVAVARS"
BASE COUNT           87 a           94 c           89 g           87 t
ORIGIN      
        1 gcgctggtaa ccgctaatag gggtcaggtc aggcactttt gccgggaccg tctgtaacgt
       61 ggatgccggt acctgctccc cgtggttatc tggttaaccc atatacaagg gagacagaat
      121 gaccgaatcc agcgattacg aatccgtcca ggtctttatc ggcgttgatg tcggtaaaga
      181 tacgcatcac gctgttgcca ttaatcgttc aggtaaacgc ctgttcgata aagcattacc
      241 caacgacgaa aacaaactca ggtcgctaat atctgacctg aaacaacatg gtcagatact
      301 gctggttgtt gatcagccag ctaccatcgg tgcgttacct gtcgccgttg cccgctc
//
LOCUS       DAJVTL010000381          356 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.399, whole genome shotgun sequence.
ACCESSION   DAJVTL010000381 DAJVTL010000000
VERSION     DAJVTL010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.399"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>356
                     /locus_tag="OQQ26_004628"
     CDS             <1..>356
                     /locus_tag="OQQ26_004628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308856.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HCS1859796.1"
                     /translation="PRVQDDEPAASRTPVQAAAPVVNENSIRAQVLAEQKARVNGIND
                     LFAMFGGRYQTLQAQCLADPECSLEQAREKLLNEMGRESTPSNKNTPAHIYAGNGNFV
                     GDGIRQALMARAGFEKT"
BASE COUNT           86 a           86 c          110 g           74 t
ORIGIN      
        1 ccacgcgtac aggatgatga acctgcagcc tcccggacgc cagtgcaggc agcagcaccc
       61 gtggtgaatg aaaacagtat ccgtgcgcag gtactggcag agcaaaaagc gcgtgtaaac
      121 ggtattaatg atctgtttgc catgtttggc gggcgttatc agacgctgca ggctcagtgt
      181 cttgccgatc ctgagtgttc gctggagcag gcccgcgaaa agctgttgaa cgagatgggg
      241 cgcgagtcca cgccatccaa taaaaataca ccggctcata tttatgctgg taacggtaat
      301 tttgtggggg acgggattcg ccaggcgctg atggcgcgtg ccggatttga aaaaac
//
LOCUS       DAJVTL010000382          335 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.401, whole genome shotgun sequence.
ACCESSION   DAJVTL010000382 DAJVTL010000000
VERSION     DAJVTL010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.401"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..>335
                     /locus_tag="OQQ26_004629"
     CDS             <1..>335
                     /locus_tag="OQQ26_004629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HCS1859797.1"
                     /translation="HLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCHLLTSMTD
                     AMRFPGGEMADLYSHRWEIELGYREIKQTMQLSRLTLRSKKPELVEQELWGVLLAYNL
                     VRYQMIKMA"
BASE COUNT           98 a           71 c          106 g           60 t
ORIGIN      
        1 atcatctggt gaagctgaaa accagcccgc aggcacgaaa aaagtggccg ggactgggaa
       61 atgaagtgac agcccgcctg ctgaccgtga cgcgcaaagg aaaagtctgc catctgctga
      121 cgtcgatgac ggacgccatg cgcttccccg gaggagaaat ggcggatctg tacagtcatc
      181 gctgggaaat cgaactggga tacagggaga taaaacagac gatgcaactg agcaggctga
      241 cgctgagaag taaaaagccg gagcttgtgg agcaagagct gtggggtgtc ttactggctt
      301 ataatctggt gagatatcag atgattaaaa tggcg
//
LOCUS       DAJVTL010000383          326 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.402, whole genome shotgun sequence.
ACCESSION   DAJVTL010000383 DAJVTL010000000
VERSION     DAJVTL010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.402"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
BASE COUNT           90 a           67 c           79 g           90 t
ORIGIN      
        1 taagtcagga tgcctacata ttcaaacagc tatgttggcg atacaatccc gacgctagta
       61 gtgatactgc ctcaagggat taccgcagtg cggaaaagta cttttaagtc ctagtcagga
      121 tacaggtggt gctgattctg gtgctctaat ttggagagag gcagtcctca tctagcacat
      181 gaagaaaatc atagttacag gcaacgtaag ggtaagctgt gattgtcttt ctcccttaag
      241 ggagcaacgg atgaaaactt ttctcgataa agttctcatc gttcttaagg cgctaatcgc
      301 gctgctggaa ctgatccgtc agttta
//
LOCUS       DAJVTL010000384          325 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.403, whole genome shotgun sequence.
ACCESSION   DAJVTL010000384 DAJVTL010000000
VERSION     DAJVTL010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.403"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..224)
                     /locus_tag="OQQ26_004630"
     rRNA            complement(<1..224)
                     /locus_tag="OQQ26_004630"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT           73 a           85 c           63 g          104 t
ORIGIN      
        1 atttcttttc ctcggggtac ttagatgttt cagttccccc ggttcgcctc attaacctat
       61 ggattcagtt aatgatagtg tgtcgaaaca cactgggttt ccccattcgg aaatcgccgg
      121 ttataacggt tcatatcacc ttaccgacgc ttatcgcaga ttagcacgtc cttcatcgcc
      181 tctgactgcc agggcatcca ccgtgtacgc ttagtcgctt aacctcacaa cccgaagatg
      241 tttcttacga ttcatcatcg tgttgcgaaa atttgagaga ctcacgaaca actttcgttg
      301 ttcagtgttt caattttcag cttga
//
LOCUS       DAJVTL010000385          322 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.404, whole genome shotgun sequence.
ACCESSION   DAJVTL010000385 DAJVTL010000000
VERSION     DAJVTL010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.404"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..>322)
                     /locus_tag="OQQ26_004631"
     CDS             complement(<1..>322)
                     /locus_tag="OQQ26_004631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="host specificity protein"
                     /protein_id="HCS1859798.1"
                     /translation="LTVAADDGSERLVSTARTTETTYRFRQLALGRYTLTVRAVNAWG
                     QQGDPASVSFRIAAPAAPSRIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIR
                     QVETT"
BASE COUNT           60 a          109 c           89 g           64 t
ORIGIN      
        1 gtggtttcaa cctgcctgat atccgcaatc cgcttttccg agaaccagaa ctcaaactgt
       61 accgtcggat cataaacggc aagatgcggc gtggcggtta tctgaaaata ccccggcgtc
      121 agctcaatcc gcgacggtgc tgccggtgcg gcaatccgga acgataccga tgccggatcg
      181 ccctgctgtc cccacgcatt taccgcccgg accgtcagcg tgtaacgccc cagcgccagt
      241 tgcctgaagc ggtatgtggt ttccgtcgtc cgggccgtgc tgaccagccg ctcactgccg
      301 tcatccgctg ccacggtcag gc
//
LOCUS       DAJVTL010000386          302 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.405, whole genome shotgun sequence.
ACCESSION   DAJVTL010000386 DAJVTL010000000
VERSION     DAJVTL010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.405"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            48..124
                     /locus_tag="OQQ26_004632"
     tRNA            48..124
                     /locus_tag="OQQ26_004632"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:82..84,aa:Ile,seq:gat)
     gene            167..242
                     /locus_tag="OQQ26_004633"
     tRNA            167..242
                     /locus_tag="OQQ26_004633"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:200..202,aa:Ala,seq:tgc)
BASE COUNT           81 a           68 c           78 g           75 t
ORIGIN      
        1 agtgctcaca cagattgtct gatgaaaatg agcagtaaaa cctctacagg cttgtagctc
       61 aggtggttag agcgcacccc tgataagggt gaggtcggtg gttcaagtcc actcaggcct
      121 accaaatttg caccgcaaat ttgaagaggt tttaactaca tgttatgggg ctatagctca
      181 gctgggagag cgcctgcttt gcacgcagga ggtctgcggt tcgatcccgc atagctccac
      241 catctctgta gtgattaaat aaaaaatact tcagagtgta cctgcaaagg ttcactgcga
      301 ag
//
LOCUS       DAJVTL010000387          299 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.denovo.406, whole genome shotgun sequence.
ACCESSION   DAJVTL010000387 DAJVTL010000000
VERSION     DAJVTL010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.denovo.406"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
BASE COUNT          104 a           39 c           57 g           99 t
ORIGIN      
        1 tatcccatgc tgaaaagtaa tcagcatatg taccggaaat agtgttataa aaagaatttt
       61 gggacaatga aaagttatta tttatcggta acatgatgga cattcagtta aagccgatgg
      121 acaaatggct ttgttaaaag aaataagtag gagtttttat gaagttcatc ccatgaaatg
      181 aacttcagca cttttttatt ataaaaggac aaacaaaatt ggctgtaaaa aaacgatact
      241 gtttcagtta actgtgaata gcttgcttgc accgtattgt tcttgttttt cggttagtt
//
LOCUS       DAJVTL010000388        20967 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.075, whole genome shotgun sequence.
ACCESSION   DAJVTL010000388 DAJVTL010000000
VERSION     DAJVTL010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20967
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.075"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(106..1083)
                     /gene="epmA"
                     /locus_tag="OQQ26_004634"
     CDS             complement(106..1083)
                     /gene="epmA"
                     /locus_tag="OQQ26_004634"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HCS1859799.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIDALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            1408..3216
                     /gene="frdA"
                     /locus_tag="OQQ26_004635"
     CDS             1408..3216
                     /gene="frdA"
                     /locus_tag="OQQ26_004635"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HCS1859800.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQNHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3209..3943
                     /gene="frdB"
                     /locus_tag="OQQ26_004636"
     CDS             3209..3943
                     /gene="frdB"
                     /locus_tag="OQQ26_004636"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur protein"
                     /protein_id="HCS1859801.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQDTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            3954..4349
                     /gene="frdC"
                     /locus_tag="OQQ26_004637"
     CDS             3954..4349
                     /gene="frdC"
                     /locus_tag="OQQ26_004637"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HCS1859802.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAAMLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            4360..4719
                     /gene="frdD"
                     /locus_tag="OQQ26_004638"
     CDS             4360..4719
                     /gene="frdD"
                     /locus_tag="OQQ26_004638"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HCS1859803.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            4782..5914
                     /locus_tag="OQQ26_004639"
                     /pseudo
     CDS             4782..5914
                     /locus_tag="OQQ26_004639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
     gene            6003..6536
                     /gene="blc"
                     /locus_tag="OQQ26_004640"
     CDS             6003..6536
                     /gene="blc"
                     /locus_tag="OQQ26_004640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin Blc"
                     /protein_id="HCS1859804.1"
                     /translation="MRLLPLVAAATTAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRA
                     ALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDDVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(6533..6850)
                     /gene="sugE"
                     /locus_tag="OQQ26_004641"
     CDS             complement(6533..6850)
                     /gene="sugE"
                     /locus_tag="OQQ26_004641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter SugE"
                     /protein_id="HCS1859805.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVVGIIGLKL
                     STH"
     gene            complement(7026..7172)
                     /gene="ecnB"
                     /locus_tag="OQQ26_004642"
     CDS             complement(7026..7172)
                     /gene="ecnB"
                     /locus_tag="OQQ26_004642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HCS1859806.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7283..7408)
                     /gene="ecnA"
                     /locus_tag="OQQ26_004643"
     CDS             complement(7283..7408)
                     /gene="ecnA"
                     /locus_tag="OQQ26_004643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HCS1859807.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(7460..8026)
                     /gene="efp"
                     /locus_tag="OQQ26_004644"
     CDS             complement(7460..8026)
                     /gene="efp"
                     /locus_tag="OQQ26_004644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HCS1859808.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8068..9096
                     /gene="epmB"
                     /locus_tag="OQQ26_004645"
     CDS             8068..9096
                     /gene="epmB"
                     /locus_tag="OQQ26_004645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HCS1859809.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFAIAPGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQ"
     gene            9491..10360
                     /locus_tag="OQQ26_004646"
     CDS             9491..10360
                     /locus_tag="OQQ26_004646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjeJ family protein"
                     /protein_id="HCS1859810.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     NLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQQNGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEIEAITRRMLDFSPRLKKLVGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
     gene            complement(10410..10763)
                     /locus_tag="OQQ26_004647"
     CDS             complement(10410..10763)
                     /locus_tag="OQQ26_004647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HCS1859811.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
     gene            complement(10901..12547)
                     /gene="groL"
                     /locus_tag="OQQ26_004648"
     CDS             complement(10901..12547)
                     /gene="groL"
                     /locus_tag="OQQ26_004648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HCS1859812.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM"
     gene            complement(12591..12884)
                     /locus_tag="OQQ26_004649"
     CDS             complement(12591..12884)
                     /locus_tag="OQQ26_004649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HCS1859813.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            13160..14416
                     /gene="yjeH"
                     /locus_tag="OQQ26_004650"
     CDS             13160..14416
                     /gene="yjeH"
                     /locus_tag="OQQ26_004650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HCS1859814.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIATRGASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LTCFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCALLLAMVGWKS
                     LYALIMLAGLWLFLPKRKTPENGITT"
     gene            complement(14432..14908)
                     /gene="fxsA"
                     /locus_tag="OQQ26_004651"
     CDS             complement(14432..14908)
                     /gene="fxsA"
                     /locus_tag="OQQ26_004651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HCS1859815.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDDRDRLDHKDDRQD"
     gene            15245..16681
                     /gene="aspA"
                     /locus_tag="OQQ26_004652"
     CDS             15245..16681
                     /gene="aspA"
                     /locus_tag="OQQ26_004652"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HCS1859816.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            16799..18100
                     /gene="dcuA"
                     /locus_tag="OQQ26_004653"
     CDS             16799..18100
                     /gene="dcuA"
                     /locus_tag="OQQ26_004653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuA"
                     /protein_id="HCS1859817.1"
                     /translation="MLVEELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            18216..18554
                     /gene="cutA"
                     /locus_tag="OQQ26_004654"
     CDS             18216..18554
                     /gene="cutA"
                     /locus_tag="OQQ26_004654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HCS1859818.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            18530..20227
                     /gene="dsbD"
                     /locus_tag="OQQ26_004655"
     CDS             18530..20227
                     /gene="dsbD"
                     /locus_tag="OQQ26_004655"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HCS1859819.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAAPQPVSVPQQEQPT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFIMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDIWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQRALADTVLLQA
                     NVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            20264..20839
                     /locus_tag="OQQ26_004656"
     CDS             20264..20839
                     /locus_tag="OQQ26_004656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HCS1859820.1"
                     /translation="MQRENVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIA
                     ACMFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
BASE COUNT         5139 a         5413 c         5264 g         5151 t
ORIGIN      
        1 atatccagtc ttaaattgtg gcatttaacg gaaaaatgaa aacatatgct acagaatggc
       61 gcttatcacg ccattcttcg ctgttaattc agtaattttt cagaattatg cccggtcaac
      121 gctaaaggcg atgacttcag ccagtgtctc cgcgcccagc gccaacatca ccagacgatc
      181 aacacctaat gccacgccgg aacagtcagg cataccgact ttcaaggcgt caatcagatt
      241 ctggtcaatg gggtgctgcg gcaaaccgcg cgccgcgcgc ttacggttat cttgttcaaa
      301 gcgttgttgc tgctcacggg catccgtcaa ttcatggaaa ccattcgcca gctcaatacc
      361 tttataataa acctcaaagc gttcagcgac ccgatgatct tcggtactga tttgcgccag
      421 tgatgcctgg ctggctggaa agtggtacac aaaggtcggt ttttctttgc caatatttgg
      481 ctctacgcca aaggtaaaca gcaattgtag caacgtgtcg cggtcttctt cggtatcagc
      541 aacgttactc aaatccagtt tcgctgcgac ttcccgcagt tgcgttttgt cggcagagag
      601 cgggtcaatt tccagataac gcaagaaagc ttgttgataa gaaaggcttt ctgctgccgg
      661 gcagtccagc acctgttgta agagatcgtc cacctcgttc atcaaccggt acatatcata
      721 gtgcggtcga taccactcaa gcatagtgaa ctcagggttg tgataacgcc ccatctcttc
      781 attacggaag ctgcggcaca gctggaatac cggcccacaa ccagcaacca gcaggcgttt
      841 catatggtat tccgggctgg tcattaacca gagattcatc ccctgcgaat gcccggggcc
      901 aacgaaacgt gtctcaaacg ggaccaaatg aatatcggtt accgtcgcct ggctcataca
      961 aggcgtctcc acctccagca ctccacgatc ggcaaagaaa cgacggatct ccgccataat
     1021 cgccgcgcgt tttaataagt taggaatgga tgcgctcggc tgccaggatg ccgtttcgct
     1081 catagttaaa tctccagttt ttgacaaggg cacgaagtct actcgcaacg cgacggcgag
     1141 acaaatttta cgcaggaatc aaacagcggt gggcagtgac taaaaaaagc acgatctgat
     1201 ggtttagtaa ttaaattaat catcttcagt gataatttag ccctcttgcg cactaaaaaa
     1261 atcgatctcg tcaaatttca gacttatcca tcagactata ctgttgtacc tataaaggag
     1321 cagtggaata gcgttcgcag accgtaactt tcaggcactt accctgaagt acggggctgt
     1381 gggataaaaa caatctggag gaatgtcgtg caaacctttc aagccgatct tgccattgta
     1441 ggcgccggtg gcgcgggatt acgtgctgca attgctgccg cgcaggcaaa tccaaatgca
     1501 aaaatcgcac taatctcaaa agtatacccg atgcgtagcc ataccgttgc tgcagaaggg
     1561 ggctccgccg ctgtcgcgca gaatcatgac agcttcgaat atcactttca cgatacagta
     1621 gcgggtggcg actggttgtg tgagcaggat gtcgtggatt atttcgtcca ccactgccca
     1681 accgaaatga cccaactgga actgtgggga tgcccatgga gccgtcgccc ggatggtagc
     1741 gtcaacgtac gtcgcttcgg cggaatgaaa atcgagcgca cctggttcgc cgccgataag
     1801 accggcttcc atatgctgca cacgctgttc cagacctctc tgcaattccc gcagatccag
     1861 cgttttgacg aacatttcgt gctggatatt ctggttgatg atggtcatgt tcgcggcctg
     1921 gtagcaatga acatgatgga aggcacgctg gtgcagatcc gtgctaacgc ggtcgttatg
     1981 gctactggcg gtgcgggtcg cgtttatcgt tacaacacca acggcggcat cgttaccggt
     2041 gacggtatgg gtatggcgct aagccacggc gttccgctgc gtgacatgga attcgttcag
     2101 tatcacccaa ccggtctgcc aggttccggt atcctgatga ccgaaggctg ccgcggtgaa
     2161 ggcggtattc tggtcaacaa aaatggctac cgttatctgc aagattacgg catgggcccg
     2221 gaaactccgc tgggcgagcc gaaaaacaaa tatatggaac tgggtccacg cgacaaagtt
     2281 tctcaggcct tctggcacga atggcgtaaa ggcaacacca tctccacgcc gcgtggcgat
     2341 gtggtttatc tcgacctgcg tcacctcggc gagaaaaaac tgcatgaacg tctgccgttc
     2401 atctgcgaac tggcgaaagc gtacgttggc gtcgatccgg ttaaagaacc gattccggta
     2461 cgtccgaccg cacactacac catgggcggt atcgaaaccg atcagaactg tgaaacccgc
     2521 attaaaggtc tgttcgccgt gggtgaatgt tcctctgttg gtctgcacgg tgcaaaccgt
     2581 ctgggctcca actccctggc ggaactggtg gtcttcggcc gtctggccgg tgaacaagcg
     2641 acagagcgtg cagcaactgc cggtaatggc aacgaagcgg caattgaagc gcaggcagct
     2701 ggcgttgaac aacgtctgaa agatctggtt aaccaggatg gcggcgaaaa ctgggcgaag
     2761 atccgcgacg aaatgggcct agcaatggaa gaaggttgcg gtatctaccg tacgccggaa
     2821 ctgatgcaga aaaccatcga caagctggca gagctgcagg aacgcttcaa gcgcgtgcgc
     2881 atcaccgaca cctccagcgt gttcaacacc gacctgctct acaccattga actgggccac
     2941 ggtctgaacg ttgctgaatg tatggcgcac tccgcaatgg cacgtaaaga gtcccgcggc
     3001 gcacaccagc gtctggacga aggttgcacc gagcgtgacg acgtcaactt cctcaaacac
     3061 accctcgcct tccgcgatgc tgatggcacg actcgcctgg agtacagcga cgtgaagatt
     3121 actacgctgc cgccagctaa acgcgtttac ggtggcgaag cggatgcagc cgataaggcg
     3181 gaagcagcca ataagaagga gaaggcgaat ggctgagatg aaaaacctga aaattgaggt
     3241 ggtgcgctat aacccggaag tcgataccgc accgcatagc gcattctatg aagtgcctta
     3301 tgacgcaact acctcattac tggatgcgct gggctacatc aaagacaacc tggcaccgga
     3361 cctgagctac cgctggtcct gccgtatggc gatttgtggt tcctgcggca tgatggttaa
     3421 caacgtgcca aaactggcat gtaaaacctt cctgcgtgat tacaccgacg gtatgaaggt
     3481 tgaagcgtta gctaacttcc cgattgaacg cgatctggtg gtcgatatga cccacttcat
     3541 cgaaagtctg gaagcgatca aaccgtacat cataggcaac tcccgcaccg cggatcagga
     3601 tactaacatc cagaccccgg cgcagatggc gaagtatcac cagttctccg gttgcatcaa
     3661 ctgtggtctg tgctacgccg cgtgcccgca gtttggcctg aacccagagt tcatcggtcc
     3721 ggctgccatt acgctggcgc atcgttataa cgaagatagc cgcgaccacg gtaagaagga
     3781 gcgtatggcg cagttgaaca gccagaacgg cgtatggagc tgtactttcg tgggctactg
     3841 ctccgaagtc tgcccgaaac acgtcgatcc ggctgcggcc attcagcagg gcaaagtaga
     3901 aagttcgaaa gactttctta tcgcgaccct gaaaccacgc taaggagtgc aacatgacga
     3961 ctaaacgtaa accgtatgta cggccaatga cgtccacctg gtggaaaaaa ttgccgtttt
     4021 atcgctttta catgctgcgc gaaggcacgg cggttccggc tgtgtggttc agcattgaac
     4081 tgattttcgg gctgtttgcc ctgaaaaatg gcccggaagc ttgggcggga ttcgtcgact
     4141 ttttacaaaa cccggttatt gtgatcatta acctgatcac tctggcggca gctatgctgc
     4201 acaccaaaac ctggtttgaa ctggcaccga aagcggccaa tatcattgta aaagacgaaa
     4261 aaatgggtcc agagccaatt atcaaaagtc tctgggcggt aactgtggtt gccaccatcg
     4321 taatcctgtt tgttgccctg tactggtaag gagcctgaga tgattaatcc aaatccaaag
     4381 cgttctgacg aaccggtatt ctggggcctc ttcggggccg gtggtatgtg gagcgcaatt
     4441 attgcgccgg tgatgatcct gctggtgggt attctgctgc cgctggggct gtttccgggt
     4501 gatgcactga gctacgagcg cgttctggcg ttcgcgcaga gcttcattgg tcgcgtattc
     4561 ctgttcctga tgatcgttct gccgctgtgg tgtggtttac accgtatgca ccacgcgatg
     4621 cacgatctga aaatccacgt acctgcgggc aaatgggttt tctacggtct ggctgctatc
     4681 ctgacagttg tcacgctgat tggtatcgtt acaatctaac gtatcgccaa tgtaaatccg
     4741 gcccgcctat ggcgggccgt tttgtatgga aaccagacct tatgttcaaa acgacactct
     4801 gcgccttatt aattaccgcc tcttgctcca catttgctgc ccctcaacaa atcaacgata
     4861 ttgtgcatcg cacaattacc ccgcttatag agcaacaaaa gatcccgggt atggcggtgg
     4921 cggtaattta tcagggtaaa ccttattact ttacctgggg ctatgcggac atcgccaaaa
     4981 agcagcccgt cacacagcaa acgttgtttg agttaggttc ggtcagcaaa acatttacgg
     5041 gcgtgcttgg tggcgacgct attgctcgag gggaaatcaa gttaagcgat cccgcaacaa
     5101 aatactggcc tgaacttacc gctaaacagt ggaacgggat cacactatta catctcgcaa
     5161 cctacaccgc tggcggcctg ccattgcagg tgccggatga ggtgaaatcc tcaagcgact
     5221 tgctgcgctt ctatcaaaac tggcagcctg catgggcgcc aggaacacaa cgtctgtatg
     5281 ccaactccag tatcggtttg ttcggcgcac tggctgtgaa gccgtctggt ttgagttttg
     5341 agcaggcgat gcaaactcgt gtcttccagc cactcaaact caaccatacg tggattaatg
     5401 taccgtccgc agaagaaaag aattacgcct ggggatatcg cgaaggcaag gctgttcatg
     5461 tttcgccagg ggcgttagat gctgaaactt atggtgtgaa gtcgaccatt gaagatatgg
     5521 cctgctgggt acgaagcaat atgaatcccc gtgatatcaa cgacaaaaca cttcagcaag
     5581 ggatacaact ggcacaatct cgctactggc aaaccggcga tatgtatcag ggcctgggct
     5641 gggaaatgct ggactggccg gtaaatcctg acagcatcat taacggcagt ggcaataaaa
     5701 ttgcactggc agcacacccc gtaaaagcga ttacgcccca actcctgcag tacgcgcatc
     5761 atgggtacat aaaacagggg caaccggcgg atttggtagc tatgtcgcgt ttattccaga
     5821 aaaagagctg ggtatagtga tgctggctaa caaaaactat cccaatccag cgagagtcgc
     5881 cgccgcctgg cagattctca acgctctaca gtaaaatttc atcgggtccg aattttcgga
     5941 ccttttctgc gcttttcctt gctgtcatct acacttagaa aaaaaccagt aaggaaacat
     6001 ttatgcgcct gctccctctc gttgccgcag cgacaactgc atttctggtc gttgcctgca
     6061 gttctcctac gccgccgcgt ggcgtaacag tagtgaataa tttcgacgcc aaacgttatc
     6121 tcggtacctg gtatgagatt gcccgttttg atcaccgttt tgaacgtgga ctggaaaaag
     6181 tcaccgcaac atacagcctg cgtgatgacg gcggcctgaa tgtcattaat aaaggctata
     6241 accctgacag aggaatgtgg cagcagagtg aagggaaagc gtactttacc ggcgcaccaa
     6301 ctcgcgctgc gctgaaagtg tcattctttg gtcctttcta tggcggttat aacgttattg
     6361 cactcgatcg ggaataccgc catgcgctgg tttgcggccc ggaccgcgac tacctgtgga
     6421 tactctcccg cacgccaacc atttctgacg atgtgaaaca ggagatgctg gcagtcgcga
     6481 cccgggaagg gtttgatgtc agtaagttta tttgggtaca gcagcccggt agttagtgag
     6541 tgctgagttt cagaccaata atccccacta cgattaacgc cagactcgcc aggcgcatcg
     6601 ggttagcgga ctcaccgagc agcacaatac cggtgatggc cgcgccgact gcgccaatac
     6661 ccgtccacac ggcataagcc gtccctactg gtaacgattt catcgcccag gcaagtagcg
     6721 ccatactgac aatcatcgcc gtcacagtaa taacacttgg cgtcaaacga ctaaagccgt
     6781 gggtatattt caggccaacg gcccatacca cttccagcag accagcaata actaagataa
     6841 tccaggacat atcaggctcc ggaaatttgg ggccgtcccc ggtgaaaaga ggcgtttgca
     6901 ggtcgtcctg caaaactgat ggttgaacgg atattttgcc aggtggcagg ggaatttcaa
     6961 ctgtttcctt tatgactatc gcagaaaaaa caaacggcac gacactgctg tcgtaccgtt
     7021 attgcttatt gctgcgcttt cgttgctgcg ccagaaatcg cgttaccgcc atcagaaatg
     7081 tcttcaccaa cgccacgcgt ggtgttgcag gcagttaata ctgttgaaag caccagaaca
     7141 gaaaagatcg ctgcaattgt cttcttcacc ataacgtctt ccttttaggt aatgttattt
     7201 atgtttgcct atagcaaatt aataatagac aacatcgcca aaaatgatgg aaatctgatg
     7261 atttttcgga agagaagaaa aattagctgg cagcgcgaga gatggagttg ccgagatgtt
     7321 tgatgtcttc gccgaaaccg cgagcggtgt tacagcccgt gagcagcgtg ctggcaagca
     7381 aaacaagaac gataaggcgt ttcatcatct ctgacctgaa taagtgatgg tgcagcctgc
     7441 aggccgcacc acaaccgcat tacttcacgc gagagacgta ttcaccagag cgggtatcca
     7501 ctttgatgac ttcgccgatt tgtacgaaca gcggaacttt aaccacagcg ccagtagaca
     7561 gggtagccgg tttgccgcca gtacctgcgg tatcaccttt caggcccgga tcggtatcaa
     7621 cgatttccag ttcaacgaag ttcggcggag taacggagat cggctgacca ttccacagag
     7681 ttacgataca ctctgcctga tccagcagcc atttagcgtt gtcgccaatt gcttttgcgt
     7741 cagcagacag ctgctcgaaa gtttcgttgt tcatgaagtg ccagaactca ccgtcgttgt
     7801 acaggtaagt caggttcata tcgacaacat cagcgccttc agcggaatca gtagatttga
     7861 aggttttttc tacgcgagta ccggtcagca gacgacgcag tttaacgcga gcaaatgcct
     7921 ggcctttacc cggttttacg aattcactcg cttcaaccgc gtaaggttcg ccgtctaaca
     7981 tgattttaag accagcacga aaatcgttgc tatagtacgt tgccataagg ccctctgaaa
     8041 tttgttaatt ggtagctaag ccacaaaatg gcgcatattg taaccctaaa taccccatcc
     8101 agagaagatt ggttaacgca acttgccgat gttgtgaccg atcctgatga acttctgcgt
     8161 cttttgaata tagacgcgga cgaaaaactg ttggccggac gcaacgccaa aaagctgttt
     8221 gccctgcgtg tgccccgctc atttatcgat cgcatggaga aaggcaatcc ggacgatccg
     8281 cttttgcgtc aggtacttac ctcgcaagat gagtttgcca tcgcgcccgg attctccacc
     8341 gacccgctgg aagaacagca cagcgtagtg cctggtttgt tgcataaata ccacaaccgg
     8401 gcgcttttgc tggtcaaagg cggctgtgcg gtaaattgcc gttattgctt ccgtcgccac
     8461 ttcccttatg cagaaaatca gggcaacaag cgtaactggc aaactgcact tgagtatgtt
     8521 gctgcgcatc cggaactgga cgagatgatt ttctccggcg gcgatccgct gatggcgaaa
     8581 gatcacgagc tggactggtt gctcacacaa ctggaagcca tcccgcatat caaacgtctg
     8641 cggattcaca gtcgtctgcc gattgtgatc ccggcacgca tcaccgaggc gctggttgaa
     8701 cgcttttcac attctacgct gcaaatcttg ctggtgaatc acatcaacca tgccaatgag
     8761 atagatgaaa cattccgtca ggcgatggct aagttgcgcc gggcgggcgt tactttgctg
     8821 aaccagagcg ttctgttacg tggtgtgaac gataacgcac aaacgctggc aaacctgagt
     8881 aatgcgttgt tcgatgcagg cgtgatgccg tattacctgc atgtgctcga taaagtacag
     8941 ggcgcggcgc attttatggt gagtgatgac gaagcacggc agattatgcg tgagttgctg
     9001 acactggtgt cgggatatct ggtgccgaaa ctggcgcgag aaattggcgg cgaacccagc
     9061 aaaacgccgc tggatctcca gctacgccag cagtaactga ttaaacaggg aagtcaaaca
     9121 ttaaaattgc ctgatgcgct acgcttatca ggcctacatc gtgcattgaa attgaatgga
     9181 tttgcaatga actgtaggcc ggataaggcg tttacgccgc atccggcaag agcaacaaac
     9241 gcaagtacag caacctgtca ttaaactggg aaatttaatc tttgcacgtt gcataacctt
     9301 taattattca tatgcattgc tgttgttact ctttatataa ctaacaccaa taattaacct
     9361 ttcttttctg tttatataga gtgagtacgg ctatttatgt tattttaaaa actattacta
     9421 ccaagcccat ttatctggct tataaattaa aattaattat ttaattgaga aatggttagg
     9481 gagaacctac atggccataa gcatcaaggg tgttaatacc ggtgttatcc gcaagagtaa
     9541 taatttcatt gcactggcgc taaaaattaa agaacctcgc aataaagaat cgttgttctt
     9601 tatgtctgtc atggaactgc gcaacctgct gattgcgctg gaaagtcgtc tgcatcaaaa
     9661 gcataaactg gatgctgctg cacgccttca gtatgagcaa gctcgcgata aagtcattaa
     9721 gaaaatggca gaaaatatcc cagaaattct ggttgatgag cttaaaaatg ccgatattaa
     9781 tcgtcgggtt aacacgctgg aacttaccga taatcaaggc gaaaatctta ccttcgtatt
     9841 aacgctacat gacggtagca aatgtgagtt agtcgtcaat gaattgcaga ttgaaatgct
     9901 ggcgcgagca atcattcatg caattaataa tgcggaaatg cgtgaactgg cattacgtat
     9961 tacctcactg ttagatttcc tgccgttata cgacgttgac tgccagcaaa atggcaatct
    10021 ggaatatgac acctattccc aaccggaatg gaaacataac ttgttcgacc attatctggc
    10081 ggtgctttac cgctttaaag atgaaagtgg caaagaacaa tttagcggcg cagtggtgaa
    10141 aacgcgtgaa gcaacgccgg gtaaagaaat agaggcgatc actcgccgaa tgcttgattt
    10201 cagcccacga ctgaaaaaac tcgtgggtgt gccatgtcag gtctatgttc gcaccgtagc
    10261 ggcgaataac gcccaaccgc taacccagga tcaatgctta cgcgcgctgc atcacttacg
    10321 tgttcaatcc accagcaaaa ctgcaccaca ggcgaaataa tctcatctgt tttactacga
    10381 ggctggaagt atccagcctc tggatcccat cagttcgggc acttatatac ctggccgata
    10441 atctggctat ccgtcgggac aaaactggac aacattccct gcgacgggct actgatgcca
    10501 taaatcacgt taccgcccat tgcagccgcc tggttgcgca gatcgtttgc tgcgccgcgc
    10561 atagaaccgc cttcttctcc gtgttgcccg gaaagccagt tgctttgctt acctgtcgca
    10621 gtaccaatca gctggcactc tgcgcctggc tgctcgtcca caatgcgtac actctgaccg
    10681 gcagcactca attcgttgct ggagctacaa cccgccatca gtagcgcggc accgacaatc
    10741 cctgctaagt attttacgtg catgttattc cccataatca atgagctgga cgctactcgc
    10801 gtcgtccgtg tctgaatctt atactagaaa gatgaccaaa agaaaaaccc ccagacattt
    10861 ctgcccgggg gtttgtttat ttctgcgagg tgcagggcaa ttacatcatg ccgcccatgc
    10921 cacccatgcc gcccataccg ccagcagcgc ctaagtcagc tgcatcgttt ttcggcaggt
    10981 cggtaaccat gcattcggtg gtgatcatca ggccagccac agaagctgcg tactgcagag
    11041 cagaacgggt tactttggtt ggatccaaga tacccatgtc gatcatgttg ccgtattctt
    11101 cggttgctgc gttgtaaccg tagttgccgt cgccgccttt aacggtgtta gcaacaacag
    11161 acggttcttc gccgcagttc aggacgatct gacgcagcgg agcttccatt gcacgcagtg
    11221 caactttgat acccacgttc tggtcttcgt tctgaccacg caggtcagcc agtttagacg
    11281 ctacgcggat cagcgcaaca ccaccaccag caaccacgcc ttcttctacc gcagcacggg
    11341 tcgcgtgcag ggcgtcttca acgcgtgctt ttttctcttt catttcaact tcggtagcag
    11401 cacctacttt gataactgca acgccgcctg ccagtttcgc tacgcgttcc tgcagttttt
    11461 cacggtcgta gtcagaagtt gcttcttcaa tctgctgacg gatctgagca acacggccct
    11521 ggattgcagc ttcttcaccc acgccatcaa tgatggtggt agtgtctttg ttgatcacaa
    11581 cacgtttagc ctgacccagg tcttccaggg ttgctttttc cagctccata ccgatctctt
    11641 cagagattac ggtaccgcca gtcagggttg cgatatcctg cagcatagct ttacgacgat
    11701 cgccgaagcc cggagcttta accgcagcaa ctttcacgat gccacgcatg gtgttaacaa
    11761 ccagagttgc cagcgcttcg ccttcaacat cttcagcgat gatcagcagc ggtttacctg
    11821 ctttggcaac agcttccaga accggcagca tttcgcggat gttggagatt ttcttgtcag
    11881 ccagcaggat gaacgggctt tccagttcta ctgcgccagt ttccggcttg ttgatgaagt
    11941 aaggagacag gtagccacgg tcgaactgca taccttcaac cacgtccagt tcgtcctgca
    12001 gaccggtacc gtcttcaacg gtgataacgc cttctttacc gactttgtcc atcgcttcag
    12061 cgatcagttt acctacggtt tcgtcggagt tagcggagat ggtaccaacc tgagcaatcg
    12121 ctttagagtc agagcacggt acggacagcg ctttcaattc ttcaactgca gcggtaacgg
    12181 ctttgtcgat accacgtttc aggtccatcg ggttcatgcc cgcagcaaca gctttcagac
    12241 cctcagtgat gatagcctga gccagtacgg ttgcagtggt ggtaccgtcg cctgcagcgt
    12301 cgttcgcttt agaggcaact tctttcacca tctgcgcacc catattttcg aacttgtctt
    12361 ccagttcgat ttcacgagca acggaaacac catctttggt gatggtcggt gcaccgaaag
    12421 atttatccag aactacgtta cggcctttcg gaccgagggt aactttcact gcatctgcca
    12481 gtacgtttac gccgcgcagc attttcacac gagcgtcgtt accgaatttt acgtctttag
    12541 ctgccattat ctttattcct taaattcgta tgttcagtgt cgtgcgcgga ttacgcttca
    12601 acaattgcca gaatgtcgct ttcggacatg atcaacactt cttcattgtc gatcttctcg
    12661 gatttcacac cgtagccatc gttgaaaata acgatgtcgc caactttcac gtccagcggc
    12721 ttcacttcgc cattttcaag gatacggcca ttgccgacag ccagcacttc gccgcgggtg
    12781 gatttagccg ctgcagagcc ggtcagaacg atgccgccag cagatttagt ttcaacttct
    12841 ttacgcttga cgatcacgcg atcatgcaat ggacgaatat tcattgataa ctctcctttg
    12901 agaaagtccg tatctgttat gggtgacgcc ggagcttacg tggtttcccg gctggtgacc
    12961 agagaaatgg ggatgaggct tcgccccttc aagggggaaa aagaaaaaaa attctgatca
    13021 gcacaaaatc gggtgaaaac cctgattcac ctcacatttc atcgcaattt cttcatcacc
    13081 gtcataagcg aatctgattg tgctaccatc gaaaatctac gcagttgccc aaaatttggg
    13141 cgcaatcgga catcaaccca tgagtggact caaacaagaa ctggggctgg cccagggcat
    13201 tggcctgcta tcgacgtcat tattaggcac tggcgtgttt gccgttcctg cgttagctgc
    13261 actggtagca ggcaataaca gcctgtgggc gtggcccgtt ttgattatct tagtgttccc
    13321 gattgcgatt gtgtttgcga ttctgggtcg ccactatccc agcgcaggcg gcgtcgcgca
    13381 cttcgtcggt atggcgtttg gttcgcggct tgagcgagtc accggctggc tgtttttatc
    13441 ggtcattccc gtgggtttgc ctgccgcact acaaattgcc gccgggttcg gccaggcgat
    13501 gtttggctgg catagctggc aactgttgtt ggcagaactc ggtacgctgg cgttggtgtg
    13561 gtatatcgct actcgcggtg ccagttccag tgctaatcta caaaccgtta ttgccggact
    13621 tatcgtcgcg ctgattgtcg ctatctggtg ggcgggcgat atcaaacctg cgaatatccc
    13681 cttcccggcg ccaggaaata tcgaacttac cgggttattt gctgcgttat cagtgatgtt
    13741 ctggtgcttt gtcggtctgg aagcatttgc ccatctcgcc tcggaattta aaaatccaga
    13801 gcgtgatttt cctcgtgctt tgatgattgg tctgctgctg gcaggattag tctactgggg
    13861 ctgtacggta gtcgtcttac acttcgacgc ctatggtgaa aaaatggcgg cggcagcatc
    13921 gcttccaaaa attgtagtgc agttgttcgg tgtaggagcg ttatggattg cctgcgtaat
    13981 tggctatctg acctgctttg ccagtctcaa catttatata cagagcttcg cccgcctggt
    14041 ctggtcgcag gcgcaacata atcctgacca ctacctggca cgcctctctt ctcgccatat
    14101 cccgaataat gccctcaatg cggtgctcgg ctgctgcgtg gtgagcactt tggtgattca
    14161 tgctttagag atcaatctgg acgctcttat tatttatgcc aatggcatct ttattatgat
    14221 ttatctgtta tgcatgctgg caggctgtaa attattgcaa ggacgttatc gactactggc
    14281 ggtggttggc gggctgttat gcgctctgtt actggcaatg gtcggctgga aaagtctcta
    14341 tgcgctgatt atgctggcgg ggttatggct gtttctgcca aaacgaaaaa cgccggaaaa
    14401 tggcataacc acataatccg gcgtttcgac attaatcctg gcgatcgtct ttatgatcaa
    14461 ggcggtcgcg gtcatcatcc tttcgctggt actcaccatc aaaagtatta ccgccaccgg
    14521 tcccggcgct aaaaccgccg cctggcatac gagaaaagcg caaatgcggc atcaacttca
    14581 ctgtcagatg cttttgcacc ggcggtaata aaagcagaag accgaggaag tcggtgaaaa
    14641 agcccggtaa taaaagcagc aaaccggcaa tgatcagcga aacactttta atcatctccg
    14701 ccgctgggtt ttcacccgcc gccatttttt gctgcatcag cacgaaattc ttaaagccct
    14761 ggttacgtac cagtgacatc ccgataactg acgtgaatat aaccagcacg agggtcagca
    14821 atacccccaa tacatgggca acctgaataa agattgaaat ctcaatatag acataaagga
    14881 aaatggcaat aaaaggtaac cagcgcaaag gtttctcctg taatagcagc cggtaaaacc
    14941 cggctacctg aatgggttgc gaatcgcgtt cagcttatat tgtggtcatt agcaaaattt
    15001 caagatgttt gcgcaactat ttttggtagt aatcccaaag cggtgatcta tttcacaaat
    15061 taataattaa ggggtaaaaa ccgacactta aagtgatcca gattacggta gaaatcctca
    15121 agcagcatat gatctcaggt attcggtcga tgcaggggat aatcgtcggt cgaaaaacat
    15181 tcgaaaccac atatattctg tgtgtttaaa gcaaatcatt ggcagcttga aaaagaaggt
    15241 tcacatgtca aacaacattc gtatcgaaga agatctgttg ggtaccaggg aagttccagc
    15301 tgatgcctac tatggtgttc acactctgag agcgattgaa aacttctata tcagcaacaa
    15361 caaaatcagt gatattcctg aatttgttcg cggtatggta atggttaaaa aagccgcagc
    15421 tatggcaaac aaagagctgc aaaccattcc taaaagtgta gcgaatgcca tcattgccgc
    15481 atgtgatgaa gtcctgaaca acggaaaatg catggatcag ttcccggtag acgtctacca
    15541 gggcggcgca ggtacttccg taaacatgaa caccaacgaa gtgctggcca atatcggtct
    15601 ggaactgatg ggtcaccaga aaggtgaata tcagtacctg aacccgaacg accatgttaa
    15661 caaatgtcag tccactaacg acgcctaccc gaccggtttc cgtatcgcag tttactcttc
    15721 cctgattaag ctggtagatg cgattaacca actgcgtgaa ggctttgaac gtaaagctgt
    15781 cgaattccag gacatcctga aaatgggtcg tacccagctg caggacgcag taccgatgac
    15841 cctcggtcag gaattccgcg ctttcagcat cctgctgaaa gaagaagtga aaaatatcca
    15901 acgtaccgct gaactgctgc tggaagttaa ccttggcgca acagcaatcg gtactggtct
    15961 gaacacgccg aaagagtact ctccgctggc agtgaaaaaa ctggctgaag tcactggctt
    16021 cccatgcgta ccggctgaag acctgatcga agcgacctct gactgcggcg cttatgttat
    16081 ggttcacggc gcgctgaaac gcctggctgt gaagatgtcc aaaatctgta acgacctgcg
    16141 cttgctctct tctggtccac gtgccggcct gaacgagatc aacctgccgg aactgcaggc
    16201 gggctcttcc atcatgccag ctaaagtaaa cccggttgtt ccggaagtgg ttaaccaggt
    16261 atgcttcaaa gtcatcggta acgacaccac tgttaccatg gcagcagaag caggtcagct
    16321 gcagttgaac gttatggagc cggtcattgg ccaggccatg ttcgaatccg ttcacattct
    16381 gaccaacgct tgctacaacc tgctggaaaa atgcattaac ggcatcactg ctaataaaga
    16441 agtgtgcgaa ggttacgttt acaactctat cggtatcgtt acttacctga acccgttcat
    16501 cggtcaccac aacggtgaca tcgtgggtaa aatctgtgcc gaaaccggta agagtgtacg
    16561 tgaagtcgtt ctggaacgcg gtctgttgac tgaagcggaa cttgacgata ttttctccgt
    16621 acagaatctg atgcacccgg cttacaaagc aaaacgctat actgatgaaa gcgaacagta
    16681 atcgtacagg gtagtacaaa taaagaaggc acgtcagatg acgtgccttt tttcttgtga
    16741 gcagtaactt aaaaataaca atctaatatc aacttgttaa aaaacaagga aggctaatat
    16801 gctagttgaa gaactcatca tagttttgct ggcgatcttc ttgggcgcca gattgggggg
    16861 aataggcatt ggttttgcag gcggattggg ggtgctggtt cttgccgcta ttggcgttaa
    16921 acccggtaac atcccgttcg atgtcatttc cattatcatg gcggttatcg ccgctatttc
    16981 tgccatgcag gttgctggcg gtctggacta tctggttcat cagacagaaa agctgctgcg
    17041 ccgtaacccg aaatacatca cgatcctcgc acctatcgtg acctatttcc tgactatctt
    17101 tgctggtact ggcaacatct ctctggcgac actgccagtt atcgctgaag ttgcgaagga
    17161 acaaggcgtt aaaccttgcc gtccgctgtc tactgcagtg gtatccgcgc agattgcgat
    17221 caccgcatcg ccaatctcag cggcagtggt ttacatgtct tccgtgatgg aaggtcatgg
    17281 catcagctac ctccatctgc tctccgtggt catcccgtcc accctgctgg cggttctggt
    17341 gatgtccttc ctggtcacta tgctgttcaa ctccaaactc tctgacgatc cgatttatcg
    17401 caagcgtctg gaagagggcc tggttgaact gcgcggtgaa aagcagattg aaatcaaatc
    17461 cggtgcaaaa acgtccgtct ggctgttcct gctgggcgta gttggcgtgg ttatctatgc
    17521 aatcatcaac agcccaagca tgggtctggt tgaaaaaccg ctgatgaaca ccaccaacgc
    17581 aatcctgatc atcatgctca gcgttgcaac tctgaccacc gttatctgta aagtcgatac
    17641 cgacaacatc ctcaactcca gcaccttcaa agcaggtatg agcgcctgta tttgtatcct
    17701 gggtgttgcg tggctgggcg atactttcgt ttccaacaac atcgactgga tcaaagatac
    17761 cgctggtgaa gtgattcagg gtcatccgtg gctgctggcc gtcatcttct tctttgcttc
    17821 tgctctgctg tactctcagg ctgcaaccgc aaaagcactg atgccgatgg ctctggcact
    17881 gaacgtttct ccgctgaccg ctgttgcttc tttcgctgcg gtgtctggtc tgttcattct
    17941 gccgacctat ccgacgctgg ttgctgcggt acagatggat gacacgggta caacccgtat
    18001 cggtaaattc gtcttcaacc atccgttctt catcccgggt actctgggtg ttgccctggc
    18061 cgtttgcttc ggcttcgtgc tgggtagctt catgctgtaa tgaccaatcg cggggcgttc
    18121 acgccccgct ttctttcccg ccgactaaca tccttccccc gtccgttgta tagtgacctc
    18181 tctcttgcgg ttccatctgt tcttgcgagg tgtttatgct tgatgaaaaa agttcgaata
    18241 ccgcgtctgt cgtggtgcta tgtacggcac cagatgaagc gacagcccag gatttagccg
    18301 ccaaagtgct ggcggaaaaa ctggcggcct gcgcgacctt gatccccggc gctacctctc
    18361 tctattactg ggaaggtaag ctggagcaag aatacgaagt gcagatgatt ttaaaaacta
    18421 ccgtatctca ccagcaggca ctgctggaat gcctgaagtc tcatcatcca tatcaaaccc
    18481 cggaacttct ggttttacct gttacacacg gagacacaga ttacctctca tggctcaacg
    18541 catctttacg ctgatcctgc tactttgcag cacttccgtt tttgccggat tattcgacgc
    18601 gccgggacgt tcacaatttg tccccgcgga tcaagccttt acttttgatt ttcagcaaaa
    18661 ccaacatgac cttaatctga cctggcagat caaagacggt tactacctct accgtaaaca
    18721 gatccgcatt acgccggaac acgcgaaaat tgccgacgtg cagcttccgc aaggcgtctg
    18781 gcatgaagat gagttttacg gcaaaagcga gatttaccgc gatcggctga cgcttcccgt
    18841 aaccatcaac caggcgagtg cgggagcgac gttaactgtc acctatcagg gctgtgctga
    18901 tgccggtttc tgttatccgc cagaaaccaa aaccgttccg ttaagcgaag tggtcgccaa
    18961 caacgcagcg ccacagcctg tgtctgttcc gcagcaagag cagcccaccg cgcaattgcc
    19021 cttttccgcg ctctgggcgt tgttgatcgg tattggtatc gcctttacgc catgcgtgct
    19081 gccaatgtac ccactgattt ctggcatcgt gctgggtggt aaacagcggc tctccactgc
    19141 cagagcattg ttgctgacct ttatttatgt gcaggggatg gcactgactt acacggcgct
    19201 gggtctggta gttgccgccg cagggttaca gttccaggcg gcgctacagc acccatacgt
    19261 gctcattggc ctcgccatcg tctttacctt gctggcgatg tcaatgtttg gcttgtttac
    19321 tctacaactc ccctcctcgc tgcaaacgcg cctcacgttg atgagcaatc gccaacaggg
    19381 cggctcaccc ggcggagtgt ttattatggg ggcgattgcc gggctgatct gttcaccatg
    19441 caccaccgca ccgcttagcg cgattctgct gtatatcgcc caaagcggga acatgtggct
    19501 gggcggcggc acgctttatc tctatgcatt gggcatgggc ctgccgctga tgctcattac
    19561 cgtctttggt aaccgcttgc tgccgaaaag cggcccgtgg atggaacaag tcaaaaccgc
    19621 gtttggtttt gtgatcctcg cactgccggt cttcctgctg gagcgagtga ttggtgatat
    19681 atggggatta cgcttgtggt cggcgctggg tgtcgcattc tttggctggg cctttatcac
    19741 cagcctacag gccaaacgcg gctggatgcg cgtggtgcaa ataatcctgc tggcagcggc
    19801 attggttagc gtgcgcccac ttcaggattg ggcatttggt gcgacgcata ccgcgcaaac
    19861 tcagacgcat ctcaacttta cacaaatcaa aacggtagat gagttaaatc aggcgctcgt
    19921 tgaagccaaa ggcaaaccgg tgatgttaga tctttatgcc gactggtgcg tcgcctgtaa
    19981 agagtttgag aaatacacct tcagcgaccc gcaggtgcaa agagcgttag cagacacggt
    20041 cttacttcag gccaacgtca ctgccaacga cgcacaagat gtggcgctgt taaagcatct
    20101 taatgtcctt ggcctaccga caattctctt ttttgacgga caaggccagg agcatccaca
    20161 agcacgcgtc acgggcttta tggatgctga aaccttcagc gcacatttgc gcgatcgcca
    20221 accgtgaacg acacttgcag tgggaaagac ggaggaaaat agcgtgcaac gtgaaaatgt
    20281 actgggagaa gccctgaaat tattagaatt acaagggatt gccaacacca cgctggagat
    20341 ggttgctgaa cgtgtggatt atccactgga cgagctgcgc cgtttctggc cagacaaaga
    20401 ggcaatcctc tacgatgcgc tgcgttatct tagccaacag atagatgtct ggcgtcgtca
    20461 gttgatgctg gacgaaacgc aaaccgccga acaaaagctg ctggcacgtt atcaggcgtt
    20521 atcggagtgc gttaaaaaca accgctatcc gggctgtcta tttatcgctg cctgtatgtt
    20581 ttatcccgat cctggccacc ctattcatca actggccgat cagcaaaaaa gcgcggccta
    20641 cgatttcacc cacgaactgt taaccacgct ggaagttgac gatccggcga tggtagcaaa
    20701 gcagatggaa ctggtgctgg aaggctgttt aagccgaatg ctggtgaatc gtagccaggc
    20761 ggatgtcgac actgcacatc ggctggcgga agatatcctg cgcttcgccc gctgccgcca
    20821 gggtggtgca ttgacctgac agaaacacag aaaagaagcg atttgccgca atcttaagca
    20881 gttgaatcgc ttttactgaa attaggttga cgagatgtgc agattacggt ttaatgcgcc
    20941 ccgttgcccg gatagctcag tcggtag
//
LOCUS       DAJVTL010000389        16622 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.099, whole genome shotgun sequence.
ACCESSION   DAJVTL010000389 DAJVTL010000000
VERSION     DAJVTL010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16622
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.099"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..141
                     /locus_tag="OQQ26_004657"
     CDS             <1..141
                     /locus_tag="OQQ26_004657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000521550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HCS1859821.1"
                     /translation="LIFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGK
                     KG"
     gene            138..752
                     /locus_tag="OQQ26_004658"
     CDS             138..752
                     /locus_tag="OQQ26_004658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HCS1859822.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QGQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(809..2266)
                     /gene="pepD"
                     /locus_tag="OQQ26_004659"
     CDS             complement(809..2266)
                     /gene="pepD"
                     /locus_tag="OQQ26_004659"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HCS1859823.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            2527..2985
                     /gene="gpt"
                     /locus_tag="OQQ26_004660"
     CDS             2527..2985
                     /gene="gpt"
                     /locus_tag="OQQ26_004660"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HCS1859824.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3077..4321
                     /gene="frsA"
                     /locus_tag="OQQ26_004661"
     CDS             3077..4321
                     /gene="frsA"
                     /locus_tag="OQQ26_004661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HCS1859825.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEKA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITDWIEKRLC"
     gene            4379..4780
                     /gene="crl"
                     /locus_tag="OQQ26_004662"
     CDS             4379..4780
                     /gene="crl"
                     /locus_tag="OQQ26_004662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HCS1859826.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(4819..5874)
                     /gene="phoE"
                     /locus_tag="OQQ26_004663"
     CDS             complement(4819..5874)
                     /gene="phoE"
                     /locus_tag="OQQ26_004663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HCS1859827.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGDTQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRDTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAVGMTYQF"
     gene            6162..7265
                     /gene="proB"
                     /locus_tag="OQQ26_004664"
     CDS             6162..7265
                     /gene="proB"
                     /locus_tag="OQQ26_004664"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HCS1859828.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7277..8530
                     /gene="proA"
                     /locus_tag="OQQ26_004665"
     CDS             7277..8530
                     /gene="proA"
                     /locus_tag="OQQ26_004665"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HCS1859829.1"
                     /translation="MLEQMGIAAKQASYKLVQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLGEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESAEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            8645..8720
                     /locus_tag="OQQ26_004666"
     tRNA            8645..8720
                     /locus_tag="OQQ26_004666"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8678..8680,aa:Thr,seq:cgt)
     gene            8886..10100
                     /locus_tag="OQQ26_004667"
     CDS             8886..10100
                     /locus_tag="OQQ26_004667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HCS1859830.1"
                     /translation="MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRV
                     AGKEKLLALGVYPEVTLADARAKREDAKRGIAGGIDPMEAKREEKIARETQLNNTFKD
                     IALEWHSSKLKKWSAGYASDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGA
                     TEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKA
                     LSSYSRSALVVMAARLLIITGLRTGELRGALWDEIDFNKAIWEIPASRMKMRRPHIVP
                     LSDQALSLIGKIREITGNYPLMFPGRNDPRKTMSEASINQVFKRIGYAGRVTGHGFRH
                     TMSTILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQWYADYMDALEKE
                     ENVVHGSFGKRA"
     gene            10243..11124
                     /locus_tag="OQQ26_004668"
     CDS             10243..11124
                     /locus_tag="OQQ26_004668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859831.1"
                     /translation="MVRAKKQDLAWFDISNYEFLNDLTLPDLIQELEWRDFLLRHAKD
                     DTAIFKEEYDIKYERIFSGDPNLTILNEEEEEVEEFIRKVNDEAPSLRNEYDDLPSLS
                     SAMGVSPVTFSELAMYSFSSIDQGFFKRDEEDCYLKANAMLASVTGNLSNCSPNIILV
                     SIDLDDATDDEIITSLTHLLPLWRKELKVPEREHVAQKRIGLKTLQKLISNRVIPIVD
                     LLIWGEKSGKEVSNPMISALVFSDDPKDTQAIKESIKPFALESISERYTRLLQLYVNK
                     DREMSLIKISDLMSRDL"
     gene            11322..11519
                     /locus_tag="OQQ26_004669"
     CDS             11322..11519
                     /locus_tag="OQQ26_004669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015462155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HCS1859832.1"
                     /translation="MSQSFIRLSEVQRRTGYSKAWIYRLIKEQRFPQSVKIGSRSIAF
                     IESEIEEWINQRIAESRGEVA"
     gene            11519..11950
                     /locus_tag="OQQ26_004670"
     CDS             11519..11950
                     /locus_tag="OQQ26_004670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001437021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859833.1"
                     /translation="MNKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYML
                     RTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCR
                     GDVLKVITHINHLANINDHNGLSQQEIADILKLYPDAFNAA"
     gene            11963..12796
                     /locus_tag="OQQ26_004671"
     CDS             11963..12796
                     /locus_tag="OQQ26_004671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001019359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HCS1859834.1"
                     /translation="MNIEKSRLISEAAPHLNASLSTINGNEFAAIVPVIPGHIGGRET
                     NIVSAKALHKALGVGKDFSTWITDRISEYDFTIGHDYSVHKTISPNLGKSPNGAAYRK
                     IKQSGRPGKDYLLSVGMAKELAMIERNDQGRAIRRYFIQCEEELQRSVPEIAARYRRQ
                     LKARISAANNFKPMCDALNMARAEQGKTTQQHHYTNESNMISRIVLGGLTAKQWARIN
                     GYSGEPRDHMNAEQLEHLSYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEVVH
                     V"
     gene            12789..12971
                     /locus_tag="OQQ26_004672"
     CDS             12789..12971
                     /locus_tag="OQQ26_004672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000476150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HCS1859835.1"
                     /translation="MFKPTGTPQPQKRYKDAHGALVTVESVSHNRVTFYRDGYQSPCV
                     QPLARFMKEFAEVNKC"
     gene            12965..14032
                     /locus_tag="OQQ26_004673"
     CDS             12965..14032
                     /locus_tag="OQQ26_004673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HCS1859836.1"
                     /translation="MLTVQKKIFSLAGMSPKSSNMTAKSGINTADTSKVYHFLVVGAN
                     ALTMSEITVDGVSVEKVGGCAREFLVVDGFLCSRSDSTKTFVHTRDVNEMSAMYCASG
                     ASNSEFSESIKKSLPLCGNTVYGYKAPHKTGAGFRSPEMYEATHDAPSVFFCAVSQTH
                     TFFSDAVIIRVACKIMVGWTGQPKGWPVSLYAGTANSVQSTTSEFRSSGGGKNSQYKE
                     AATCWLLPLPKNRNLSGLSPQFAAIARQLPPKFIILLPSLNAMLAVLWCAITSAFLLV
                     VSAWRWHMIKTYDVHMDPLERTSQIITLTEVINDILVSNSPSRDERLKALLAILDLAV
                     RDVHFLLEGGEMPGKTGATNE"
     gene            14025..14219
                     /locus_tag="OQQ26_004674"
     CDS             14025..14219
                     /locus_tag="OQQ26_004674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001065662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859837.1"
                     /translation="MNNSINTPRLTSALQLIEQAAAVLVAVSLSAEEMDATDVVDAIK
                     ACSSLVNDARAELVILGGEK"
     gene            14216..14479
                     /locus_tag="OQQ26_004675"
     CDS             14216..14479
                     /locus_tag="OQQ26_004675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001468267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinic acetylcholine receptor subunit beta"
                     /protein_id="HCS1859838.1"
                     /translation="MNINLIYRHPCELEIESLLGREEPYPDTFTPADCATERLTRART
                     GLVHVMNEIVPSVGGEQATVINSWLQKVTSLIDISLIDVESAK"
     gene            14476..14697
                     /locus_tag="OQQ26_004676"
     CDS             14476..14697
                     /locus_tag="OQQ26_004676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000181940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859839.1"
                     /translation="MTNIQLIEAQCRIEQVQTVLGFWLEGASPSNRDKLMIGAVMSLL
                     NGVPEAIQEADELLGKYELQNHSGEAKHE"
     gene            14690..15292
                     /locus_tag="OQQ26_004677"
     CDS             14690..15292
                     /locus_tag="OQQ26_004677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016243485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859840.1"
                     /translation="MNNFLTFHTEATPDGVNIMYRSNDGMTERVEAVSYIDAVNRLDA
                     GDYDDKPDEGMSIHLAIADGGNQGYFDYTSQHNVIMWRWLIATVFMLEMREENGTVSI
                     IDDTGNPSEVAVYSNGIVAMPLYPVAERLAMANNIEGAMIERFGIESGTERAIIFYRA
                     MMDVEQGALTPFGRETLAELHNSFIAELNENGMPAEPVTH"
     gene            15303..15644
                     /locus_tag="OQQ26_004678"
     CDS             15303..15644
                     /locus_tag="OQQ26_004678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000628964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859841.1"
                     /translation="MITKNFRLNALANKYASALYNHITSTSGGDYFMVDADGEAVRVE
                     IVNGVKGVRSLIDSYTLAAMKVFYPQWETVGIELLERCVTKDGLTDVGREIWQSMVND
                     MGATVAGGSHA"
     gene            15637..16008
                     /locus_tag="OQQ26_004679"
     CDS             15637..16008
                     /locus_tag="OQQ26_004679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001580247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859842.1"
                     /translation="MRENAEMALSSAIGEQVAKIAGAVWIHNLHSTGEEKMAIQTPEG
                     RTITTSLKPSDVCDLICAFMYPAMRTVHGDKWKLATTAEFDMWLNNDGMLTDYGITKW
                     QMLVSHIANAIDHVGYGDAKH"
     gene            15995..>16622
                     /locus_tag="OQQ26_004680"
     CDS             15995..>16622
                     /locus_tag="OQQ26_004680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020231445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HCS1859843.1"
                     /translation="MRNIDLIRQVISASENNWPHVLGCLNINVPDSPRRHAPCPACGG
                     KDRFRFDDNGRGSFICNQCGAGDGLDLIKRVNNCDTTEAALLAADVLGIDYRTTETPE
                     ATSQKREQLETERQRREQERLKRAEKDEQQRRDTFSRQFDDMRRKAVNGKSDYLVAKG
                     VGDFTFPVLPDGSLLLALVDKSGAVTAAQTITSHGEKRLLTGSAKRGAY"
BASE COUNT         4337 a         3927 c         4280 g         4078 t
ORIGIN      
        1 ctcatctttg aagaagcgcc acaagcctat aaatcggctg aaagcgtggt gcaatgtctg
       61 gtgcaggccg gtttaattat tcctgtcgcg cggctgcgtc cggtgctaac gctcaaaaac
      121 agtggaggga aaaaaggatg atcttgctac aactctcctc agcgcagggg ccggaagaat
      181 gttgtctcgc agtgaaaaag gcgctggacc ggctaattaa agaagctgcc cgacaagacg
      241 tcgcggtaac ggtgctggaa acagaaacag gccgctactc tgacacgctg cgttcggcgc
      301 tgatttctct ggatggcgac aacgcatggg cgttaagcga aagctggtgt ggcactattc
      361 agtggatttg tccgagcccg tatcgcccac atcacgggcg taaaaactgg tttctgggca
      421 ttgggcgttt taccgctgat gagcaggggc aatccgatgc gatccggtat gagacgctgc
      481 gttcgtcggg gccgggcggt caacatgtca ataaaaccga ctcggcggta cgtgccacgc
      541 atctggcatc cggtattagc gtgaaggttc agtcagagcg cagccagcat gctaacaagc
      601 ggctggcgcg attgctgatt gcctggaagc tggaacaaca gcaacaggaa aatagcgcgg
      661 tgctgaaatc gcagcggcga atgttccatc accagattga acgtggcaac ccgcgacgaa
      721 cgtttacagg gatggctttt atcgaaggat aatgaaggat gaaactgccg gaaggcgatt
      781 aaacgccatc cggcagcaaa tcaaataatt acttcgccgg aatttctttc agcagttcag
      841 tcagcagtgt ccagtaatga cctacgcttt cgatgtgaac ttgctcatcc ggagagtgtg
      901 gaccggtgat tgttggcccg atagaaacca tgtccatttc cggatacggt tttttgaaca
      961 gaccacattc caggcccgcg tggataatct ggatgttcgg cgtcttgttg aacaggcgct
     1021 gataggtttc acgtaccaga tgcattaccg gagaattagc gtccggctgc cagccaggat
     1081 atgcgccttt cgcttcggtt ttcgcgccag ccagtttacc cagcgaatcc agcatgctca
     1141 ccacgtagtc tttaccgctg tcgatcagtg aacggatcag gcagtgaatt tctacgttat
     1201 tgtcagtcat ggtcaccaca ccgacgttca gggaggtttc gaccacacct tttgccacgt
     1261 cggaattgcg gatcacaccg ttcggggtgg cgttcagcag acgaataaag gtatcgcgag
     1321 atttcgcaat cagggctgct ttatcgttcg ctacagagtc cagcaacaag gccagatttt
     1381 tctctttctc tgccagctcg tttttcagga tctcctgata ggtattcacc agagatttca
     1441 gtgcgtcgac tttatcagct gcgacagcaa tggtcgcaaa ggcttcacgc gggatggcgt
     1501 tacgcagtgt gccgccgttg aaatcgataa ggcgcaggtc cagttcttct gcatgacccg
     1561 ccaggaagcg caccagcagt ttgttggcat tacccaggcc aacgtggatt tcaccgccgg
     1621 agtgaccgcc tttcagacct tttaaggtta acttgaaggt ttcaaaacca gctggaaccg
     1681 cttcacgatc taaatgcagg ttggaggtga agtcgatacc ccccgcacaa cccatgtaga
     1741 tttcaccttc ttcttcggag tcggtgttaa tcagaatatc agcctgcaac cagttgctct
     1801 gtaagccgaa cgcaccgtcc ataccggctt cttcggtcat ggtcagcagc acttccagcg
     1861 ggccgtgaac cacgttttcg tcagccagaa ccgccagtgc agaggccata ccaatgccgt
     1921 tatccgcacc cagcgtggtg ccgcgcgctt taacccattc gccatcaata taaggctgga
     1981 taggatcttt cgtgaagtca tgcacggtgt cgttattttt ctgcggcacc atatcgaggt
     2041 gggcctgtaa gacgaccggt ttacgatttt ccatacctgc ggtagcaggt ttacgaatca
     2101 ggatattacc tacctgatcg cgttcgacat ggaaaccttt ctcttttgcc caaccaacaa
     2161 tgtattcagc gagttgctct tcatgatagg acgggtgagg aatagaacag attttggcaa
     2221 aaatatccca cagcggctgt ggagataatt gagacagttc agacacgtta agtctccttg
     2281 tcgatcaccc gcaaaacagt attgcaggtc acagggttag cagaaaatgt tgtcaacaca
     2341 agacaggctt gcgagatatg tttgagaata ccactttatc ccgcgtcagg gagaggcagt
     2401 gcgtaaaaag acgcggactc atgtgaaata ctggttttta gtgcgccaga tctctataat
     2461 ctcgcgcaac ctattttccc ctcgaacact ttttaagccg tagataaaca ggctgggaca
     2521 cttcacatga gcgaaaaata catcgtcacc tgggacatgt tgcagatcca tgcacgtaaa
     2581 ctcgcaagcc gactgatgcc ttctgaacaa tggaaaggca ttattgccgt aagccgtggc
     2641 ggtctggtac cgggtgcgtt actggcgcgt gaactgggta ttcgtcatgt cgataccgtt
     2701 tgtatttcca gctacgatca cgacaaccag cgcgagctta aagtgctgaa acgcgcagaa
     2761 ggcgatggcg aaggcttcat cgttattgat gacctggtgg ataccggtgg tactgctgtt
     2821 gcgattcgtg aaatgtatcc aaaagcgcac tttgtcacca tcttcgcaaa accggctggt
     2881 cgtccgctgg ttgatgacta tgttgttgat atcccacaag atacctggat cgaacagccg
     2941 tgggatatgg gcgtcgtatt cgtcccgcca atctccggtc gctaatcttt tcaacgcctg
     3001 gcattgccgg gcgttgttct ttttaacttc aggcaggtta caatagtttc cagtaagtat
     3061 tctggaggct gcatccatga cacaggcaaa cctgagcgaa accttgttca aaccccgctt
     3121 taaacatcct gaaacctcga cgctagtccg ccgctttaat cacggcgcac aaccgcctgt
     3181 gcagtcggct cttgatggta aaaccatccc tcactggtat cgcatgatta accgtctgat
     3241 gtggatctgg cgcggtattg acccacgtga aatcctcgac gtccaggcac gtattgtgat
     3301 gagcgatgct gaacgtaccg acgatgattt atacgatacc gtgattggct accgtggtgg
     3361 caactggatt tatgagtggg ccacccaggc gatggtgtgg caacaaaaag cctgtgcgga
     3421 agaagatccg caactcagtg gtcgacactg gctgcatgcg gctacgttgt acaacattgc
     3481 cgcctatcct catttgaaag gagatgacct ggccgagcaa gcgcaggctt tgtcaaaccg
     3541 cgcctatgaa aaggccgctc agcgtctacc gggcacgatg cggcagatgg agtttaccgt
     3601 acccggcggt gcgcccatca ccggcttttt gcatatgccg aaaggcgatg gcccgttccc
     3661 gacggtatta atgtgtggtg gtctggatgc gatgcagacg gactattaca gcctgtatga
     3721 acgttatttt gcgccgcgcg gcattgcgat gctgactatt gatatgccgt cggtgggctt
     3781 ttcttcaaaa tggaagctca cccaggactc cagcctgttg catcagcacg tcttaaaggc
     3841 gctgcctaac gttccgtggg tggatcacac tcgcgtcgcg gcctttggtt tccgtttcgg
     3901 cgctaacgtt gccgtgcgtc tggcatacct tgaatcgccg cgtctgaaag cggttgcctg
     3961 tcttggtccg gtagttcata ccctgttgag tgattttaag tgccagcaac aggtgccgga
     4021 aatgtatctt gacgttctgg ccagtcgttt ggggatgcat gatgcttccg acgaagcgtt
     4081 acgcgtggag ttgaatcgct attcattaaa agtgcaagga ttgctggggc gtcgctgccc
     4141 aacgccaatg ttatcaggct actggaagaa cgatccgttc agcccggaag aggactcacg
     4201 cttaatcacc tcatcatctg ctgacggtaa attattagag atcccattta acccggtgta
     4261 tcggaatttt gacaaaggtc ttcaggaaat cacggactgg atcgaaaaac gtttgtgtta
     4321 aaaatttgct aaattttgcc aatttggtaa aacagttgca tcacaacagg agattgcaat
     4381 gacgttaccg agtggacacc cgaagagcag attgatcaaa aaatttaccg cactaggccc
     4441 gtatattcgt gaaggtaagt gcgaagataa tcgattcttt ttcgattgtc tggctgtatg
     4501 cgtcaacgtg aaaccggcac cggaagtgcg tgaattctgg ggctggtgga tggagcttga
     4561 agcgcaggaa tcccgtttta cctacagtta ccagtttggt ctgttcgata aagcaggcga
     4621 ctggaagagt gttccggtaa aagacactga agtggttgaa cgactggagc acaccctgcg
     4681 tgagtttcac gagaagctgc gtgaactgct gacgacgctg aatctgaagc tggaaccggc
     4741 ggatgatttt cgtgatgaac cggtgaagtt aacggcgtga gtgaaatgtg ccggatgcat
     4801 cacatccggc aataatcatt aaaactgata ggtcatgcca accgcgacaa tatcatcatt
     4861 attaatattc aatttgttat cgctatccag ttggttgatt ttataatcaa caaacgctga
     4921 catatttttg ttgaaataat atgtagcccc gacatcgata taattgacaa gatcttcatc
     4981 accgatgccc tcaatatctt tccctttcga taagacataa cccagcgatg gacgcagacc
     5041 aaagtcaaac tggtattgag cgaccgcttc aaagttctgt gtcttattgg caaagccgcc
     5101 agttattggc gtcattttgc gtgtttcaga ataaaaagtt gccagataaa tattattggc
     5161 atcgtatttc agacctgtag cccatgcttc tgcacgcttg cctgtgtcac ggctttgcag
     5221 gttctgctcg ttggtgcgat ctgagttggt ataggcccca ctaatggcga aatcgctgcc
     5281 gccaaagtca tatgtcaatg acgtgccgaa gccatcgccg ttttgctttt taacgtcgcg
     5341 gttttcgttt ttcccttgat attgcagggt taagttcagg ccatcgataa cgccgaagaa
     5401 gtcggtgttc cgatacgtcg ccagaccgct ggcgcgtttg gtcataaagt tgtcggtctg
     5461 cgccgaggag tcgccaccaa attccgggaa catatcggtc caggcttcca cgtcatacaa
     5521 cgcgcccagg ttacgaccat aatcgaaaga acccaaatct ttatatttca acccggcaaa
     5581 agcgagacgc gttttttgct gtgcagtatc actctctgct ttattaccgg caaactctgc
     5641 ttcccaacga ccatagccag tcagttgatc gttaatttgt gtgtcgcctt taaaaccaaa
     5701 acggatataa ctctggtcgc catctttact gtcgttatca ctcatataat gcatggcttt
     5761 aactttgcca tagacatcca gtttattacc gtctttgtta tatatttctg cggcctgtac
     5821 ggatgcagat gccacaatgc ccatcaccac taatgccaga gtgctctttt tcattttcat
     5881 tcctgatttt aattaacgcg cgaatattca gcgggagagt cccgttgaaa acaggaaagt
     5941 ttttaacctg agattgttaa agatatatta cagattaata atattcttaa aatgtggtaa
     6001 tttattaaat ctgtaataaa agcgtaaaca actgccgcta cgcttgctga tcccgcgcaa
     6061 caaaacgcca tgctttgctc gcagatggtt ggcaaccgac gacagtcctg ctaaaacgtt
     6121 cgtttgatat catttttcct aaaattgaat ggcagagaat catgagtgac agccagacgc
     6181 tggtggtaaa actcggcacc agtgtgctaa caggcggatc gcgccgcctg aaccgtgccc
     6241 atatcgttga acttgttcgc cagtgcgcgc agttacatgc cgccgggcat cggattgtta
     6301 ttgtgacgtc gggcgcgatc gccgccggac gtgagcacct gggttacccg gaactgccag
     6361 cgactatcgc ctcgaaacaa ctgctggcgg cggtagggca gagtcgactg attcaactgt
     6421 gggaacagct gttttcgatt tatggtatcc acgtcgggca aatgctgctg acccgtgctg
     6481 atatggaaga ccgtgaacgc ttcctgaacg cccgcgacac cctgcgtgcg ttgctcgata
     6541 acaatatcgt tccggtaatc aatgagaacg atgctgtcgc tacggcagag attaaggtcg
     6601 gcgataacga taacctttct gcgctggcgg cgattctggc gggtgccgat aaactgttgc
     6661 tgctgaccga tcaaaaaggt ttgtataccg ctgatccgcg cagcaatccg caggcagaac
     6721 tgattaaaga tgtttacggc attgatgacg cactgcgcgc gattgccggt gacagcgttt
     6781 caggtctcgg aactggcggc atgagtacca aattgcaggc cgctgacgtg gcttgccgtg
     6841 cgggtatcga caccattatt gccgcgggca gcaagccggg cgttattggt gatgtgatgg
     6901 aaggcatttc cgtcggtacg ctgttccatg cccaggcgac tccgcttgaa aaccgtaaac
     6961 gctggatttt cggtgcgccg cctgcgggtg aaatcacggt agatgaaggg gcaactgccg
     7021 ccattcttga acgcggcagc tccctgttgc cgaaaggcat taaaagcgtg actggcaatt
     7081 tctcgcgtgg tgaagtcatc cgcatttgca acctcgaagg ccgcgatatc gcccacggcg
     7141 tcagtcgtta taacagcgat gcattacgcc gtattgccgg acaccactca caagaaattg
     7201 atgcaatact gggatatgaa tacggcccgg ttgccgttca ccgtgatgac atgattaccc
     7261 gttaaggagc aggctgatgc tggaacaaat gggcattgcc gcgaagcaag cctcgtataa
     7321 attagtgcaa ctctccagcc gcgaaaaaaa tcgtgtgctg gaaaaaatcg ccgatgaact
     7381 ggaagcacaa agcgaaatca tcctcaacgc aaacgcccag gatgttgctg acgcgcgtgc
     7441 caatggcctt ggcgaagcga tgcttgaccg tctggctctg acgcccgcac ggctgaaagg
     7501 cattgccgat gatgtgcgcc aggtatgcaa cctcgccgat ccggtggggc aggtaatcga
     7561 tggcggcgta ctggacagcg gcctgcgtct tgagcgtcgt cgcgtaccgc tgggggttat
     7621 tggcgtgatt tatgaagcgc gcccgaacgt gacggttgat gtcgcttcgc tgtgcctgaa
     7681 aaccggtaat gcggtgatcc tgcgtggtgg caaagaaacc tgtcgcacta acgcggcaac
     7741 ggtggcggtg attcaggacg ccctgaaatc ctgtggctta ccggcgggtg ccgtgcaggc
     7801 gattgataat cctgaccgtg cgctggtcag tgaaatgctg cgtatggata aatacatcga
     7861 catgctgatc ccgcgtggtg gcgctggttt gcataaactg tgccgtgaac agtcgacaat
     7921 cccggtgatc actggtggta taggcgtatg ccatatttac gttgatgaaa gtgcagagat
     7981 cgctgaagcc ctgaaagtaa tcgtcaacgc gaaaacccag cgtccgagca catgtaatac
     8041 ggttgaaacg ttgctggtaa ataaaaacat agcagatagc ttcctgcccg cattaagcaa
     8101 acaaatggcg gaaagcggcg tgacgttaca cgcagatgca gctgcactgg cgcagttgca
     8161 ggcaggccct gcgaaggtgg ttgctgttaa agcggaagag tatgacgatg agtttctgtc
     8221 attagatttg aacgtcaaaa tcgtcagcga tcttgacgat gccatcgctc atattcgtga
     8281 acacggcaca caacactccg atgcgatcct gacccgcgat atgcgcaacg cccagcgttt
     8341 tgttaacgaa gtggattcgt ccgctgttta cgttaacgcc tctacgcgtt ttaccgacgg
     8401 cggccagttt ggactggggg cggaagtggc ggtaagcaca caaaaactcc acgcgcgtgg
     8461 cccaatgggg ctggaagcac tgaccactta caagtggatc ggtattggtg attacaccat
     8521 tcgtgcgtaa ataaaaccgg gtgatgcaaa agtagccatt tgattcacaa ggccattgac
     8581 gcatcgcccg gttagtttta accttgtcca ccgtgattca cgttcgtgaa catgtccttt
     8641 cagggccgat atagctcagt tggtagagca gcgcattcgt aatgcgaagg tcgtaggttc
     8701 gactcctatt atcggcacca ttcaaacatc tccccaagtc tactaaagtc tttcaaaacc
     8761 ccttataatc cgtgtattaa agccccgttc gtcttttgac gtctactaaa gtccctcaaa
     8821 atctacggtc agatgggggt acttatgggg gtatttgctg ttcggtttag tggaggtacc
     8881 cccaagtgaa actcaatgcc cgtcaaatag acacagccaa gccaaaagag aaggcttaca
     8941 agctggccga tggtggcggt ttgtatctct tggtaaaacc taatggaggt aaatactggc
     9001 gacttaaata tcgtgtagct ggtaaagaga agctattggc actaggtgtg tatcctgagg
     9061 ttactctagc cgatgctcgg gcaaaacgtg aagatgcgaa aagaggtatc gctggtggta
     9121 tcgatccgat ggaagcgaaa cgagaggaaa agattgcccg ggaaacgcag ttaaacaaca
     9181 ccttcaaaga tattgccctt gagtggcaca gcagcaaatt aaaaaaatgg tctgctggtt
     9241 atgcttcaga catcctcgaa gccttcaaca aagatgtgtt cccttacatt ggcaaaaaac
     9301 caatcgccga aatcaaacca cttgaacttc tgaatgtgct gcggcgcatc gaggggcgcg
     9361 gtgctacaga aaaagccaaa aaagtgaggc agcggtgcgg ggaagttttc cgctatgcaa
     9421 tagtcactgg tcgcgcagag tataaccctg caccagacct tactagcgcg atgcaaggcc
     9481 atgaatctaa tcattaccct ttccttacag ctaaagaatt acctgatttt ttcaaggcat
     9541 tgtccagtta ctcaagaagc gcattggttg ttatggcggc tcgtctactg attatcaccg
     9601 gcttgcggac tggcgaacta cgtggcgcat tatgggatga aattgatttc aacaaggcta
     9661 tctgggagat acccgcttca cgtatgaaaa tgcggcggcc tcatattgtg ccattgtctg
     9721 atcaggctct ttcgcttatt gggaagatta gagaaataac aggcaattac cctcttatgt
     9781 ttcccgggcg caatgatcca aggaaaacaa tgagtgaggc cagcataaac caagtgttta
     9841 agcgcattgg ctacgctgga cgtgtaactg gtcatgggtt ccggcacact atgagcacga
     9901 ttttgcatga gcagggctat aacaccgcgt ggatagaaac gcagctcgct cacgttgata
     9961 agaactcaat tcgtggcaca tacaaccatg cgcaatatct ggatggaagg cgggagatgc
    10021 ttcaatggta tgccgactat atggatgcgc tggagaagga ggagaacgtt gttcatggtt
    10081 cgtttgggaa acgagcttaa ctgtatgaat agaccgtgtt aagcaatggt agtagactta
    10141 tgtagacgaa caaagaatag gctatgtcta ggctgatccc cgaaaacccg tacaccccta
    10201 cgggctggca tagccgtcag aattaggggc gcggggtggc gtatggtgag agccaaaaaa
    10261 caagatttag catggtttga tattagtaat tatgaatttt taaatgattt aaccttgccg
    10321 gacttgattc aagaattaga gtggcgcgat tttttattgc gtcatgcaaa agatgacact
    10381 gctatattca aagaagagta cgatataaaa tatgaaagga ttttttcggg cgatcctaac
    10441 ctaaccattc tcaatgaaga agaggaagag gtcgaagaat ttattcgcaa agtaaatgat
    10501 gaagccccat cattaagaaa tgagtacgat gatcttccct cattatcttc agctatgggg
    10561 gttagtccag taacattttc agagctggcc atgtactctt tctcatcgat agatcaaggc
    10621 ttttttaaaa gagacgaaga ggattgctac ctcaaggcaa acgctatgct tgcgagtgtt
    10681 actggaaacc taagtaattg ttcccctaac atcatactcg tttctataga tttagatgac
    10741 gccactgatg acgaaattat taccagcctg actcaccttc tacctctatg gcgaaaagag
    10801 ttaaaagtac cagagagaga gcatgtcgct cagaaaagga ttggattaaa gacccttcag
    10861 aagttgatat ctaatagagt gatacctatt gttgatctgc tgatttgggg tgagaagtca
    10921 ggtaaggaag tgagcaatcc gatgatttct gccttggttt ttagtgatga tccgaaagat
    10981 acgcaggcta ttaaggaatc aataaagcct tttgcacttg aatctataag cgagagatac
    11041 acccgcttgc ttcagcttta tgtaaacaaa gacagagaaa tgagcttgat aaaaatatct
    11101 gatttaatga gtagagattt atagcaagca aaatcctacg taaacgtttt aagtaaattt
    11161 cgcgatttcc gctttgaata cgctactgtg tatttcaaag cggataatct tctcaaaaaa
    11221 atattttatt tttatccgct atcacccatt caccggtttg tttaatctcc tttctgtcta
    11281 ctgatgtcca ttaaagaaga tgacagaata taggagtaaa catgtctcaa tcatttattc
    11341 gtctttctga ggttcaacgc cgtactggtt acagcaaagc gtggatttat cggctcatca
    11401 aagaacagcg attccctcaa tctgtaaaga ttggaagccg atcaattgcg tttattgaaa
    11461 gtgaaattga agaatggatt aatcagcgca tcgctgagtc gcgtggcgag gtagcgtaat
    11521 gaataagaaa aaccgcccat tacaggcggc taattcagat attcgcgtat ctgatgttac
    11581 gccccttaca aaatcccttc aagcaccaaa gcgcacaccg aaaaagcatc gtgccagagt
    11641 ctatatgctg cgtactggta tagagggatg gacagaaaat gacattcttc gctactgccg
    11701 tctgtcttct ggtcgtaact atgcaacaga gttagaacgc cagcttggaa tcactctgga
    11761 gcgtatcgac gaaaagaatc ctgatggtat cggaacacac cttcgctacc gtttctcctg
    11821 ccgtggtgat gttctgaaag tgatcactca tattaaccat cttgcgaaca taaatgatca
    11881 caacggactt tctcagcagg aaattgccga cattctgaaa ctctacccgg acgcgtttaa
    11941 cgccgcttaa cggagactga aaatgaacat cgaaaaaagc agattaattt ctgaggccgc
    12001 ccctcatctg aacgcctctc tgagcacaat taacggtaat gaatttgccg caattgtccc
    12061 ggttattcct ggtcatatcg gtgggcgtga aaccaatatt gttagcgcaa aagcgttaca
    12121 caaagcgttg ggcgtgggaa aagacttctc tacatggatc actgatcgca tctctgaata
    12181 tgacttcacc attgggcacg attactcagt ccataaaact atttccccaa atttggggaa
    12241 aagcccgaat ggcgcggctt acagaaagat taagcagtct ggcagacccg gcaaagacta
    12301 tctgttaagt gtcggaatgg cgaaagaact ggcaatgatc gaacgcaatg atcagggtcg
    12361 cgctatccgc cgttatttca tccagtgcga ggaagaatta cagcgtagcg ttcctgaaat
    12421 cgccgcccgc tatcgtcgcc agctaaaagc ccgtatcagt gccgcaaaca actttaagcc
    12481 aatgtgcgat gcgctgaata tggcccgtgc cgagcagggg aaaacgacgc agcaacacca
    12541 ctacacaaac gagagcaata tgatttctcg tatcgttctt ggtgggctaa ctgctaagca
    12601 gtgggcgcgg ataaatggct attctggcga acctcgcgac catatgaacg cagaacaact
    12661 tgagcacctc tcatatctcg aaagcaccaa tatcacgtta attgatatgg gcatggaata
    12721 tgagcagcgc aaaggagaac tcacccgcct gtcgcaacgc tggctcgcta agcgtctgga
    12781 ggtggtccat gtttaagccg acaggaacac cacaacctca aaaacgctac aaggatgccc
    12841 acggagcact cgttactgtc gaaagcgtgt ctcacaaccg agtgacgttt tatcgcgacg
    12901 ggtatcaatc gccatgcgta caaccgctgg cgcgcttcat gaaggagttc gcggaggtta
    12961 acaaatgcta accgtccaga agaagatatt ttcactggct ggtatgtcgc caaaatccag
    13021 caatatgaca gcaaagtctg gcattaatac agcagataca agcaaagttt atcattttct
    13081 ggtggtggga gcgaatgcct taactatgtc agaaattacg gtcgatggtg ttagcgttga
    13141 gaaggtcggc ggctgcgcca gagaatttct ggtcgtagat ggctttctct gctcgcgtag
    13201 tgactccaca aaaaccttcg tccacacgcg cgacgttaac gaaatgagcg cgatgtattg
    13261 tgcatctggt gcttccaata gtgagttttc ggagtccata aaaaagagct tgccgttatg
    13321 cggcaacacg gtttatggtt ataaggcacc tcataaaacg ggtgccgggt ttcgcagccc
    13381 ggaaatgtac gaggcgacac atgacgcgcc gagcgtcttt ttttgtgccg ttagccagac
    13441 tcacactttt ttcagtgatg cggttataat ccgcgtcgct tgcaaaatta tggtgggctg
    13501 gacagggcag ccgaaaggct ggccggtttc cttgtacgcc ggtactgcga actctgttca
    13561 gtccaccacc agcgagtttc gcagctccgg tggtgggaag aactcccagt acaaggaggc
    13621 tgccacatgc tggctactac cactacccaa aaaccgcaat ttatctggat tatcgccgca
    13681 gttcgccgcg attgcccgac aattaccgcc aaaattcatc atattgctgc cgagtctgaa
    13741 cgcgatgctc gccgttctct ggtgcgcgat cacatctgct tttttgctgg tcgtatccgc
    13801 atggaggtgg cacatgatta aaacctacga tgtgcatatg gatcccctcg aacgcacaag
    13861 ccagatcatc acactgacag aagtgattaa cgacattctg gtgagcaact ctccctcacg
    13921 agacgaaaga ctgaaggcgt tactcgcgat attggatctc gccgttcgtg acgttcattt
    13981 cctgctggaa ggtggcgaaa tgccaggaaa aacgggggca accaatgaat aactcaatta
    14041 atacccctcg ccttacgtcc gcacttcaat taatcgagca agcagcggct gtcctggttg
    14101 ctgtcagtct ttcggctgaa gaaatggacg ctactgatgt cgtggatgcg attaaagcgt
    14161 gctcatcttt ggttaacgat gcccgtgccg agctggtaat tcttgggggt gaaaaatgaa
    14221 tatcaactta atttatcgtc atccgtgtga gctggaaatt gaatcattgc tggggcgtga
    14281 agagccatat ccagacacat tcactcccgc agattgcgcg actgaacggc ttaccagagc
    14341 gcgcacaggt ctggttcatg tgatgaatga gattgttccc tcggtgggcg gggaacaggc
    14401 gacagtaatc aatagctggc tacaaaaagt tacctccctg atagatatca gtttaatcga
    14461 tgtggagagt gcgaaatgac caacatccag ctcattgaag cgcaatgtcg catcgaacag
    14521 gttcagactg ttttagggtt ctggcttgaa ggggccagcc ccagcaacag agacaagtta
    14581 atgattggcg cggttatgtc actgctcaat ggcgtaccag aagctattca ggaagcggac
    14641 gaattgttgg gcaaatatga gttacagaat cattcaggcg aggcgaaaca tgaataattt
    14701 cttaactttc catacagaag caacgcctga cggcgtaaac atcatgtacc gcagcaacga
    14761 tggcatgaca gaacgcgttg aggccgtctc atatattgat gccgtaaatc gtctggatgc
    14821 cggggattat gacgataaac cagatgaagg tatgtcaata catctcgcta ttgccgatgg
    14881 cggcaaccag ggatatttcg attacacatc acagcataac gtcattatgt ggagatggct
    14941 gatcgcaaca gtattcatgc tggaaatgag agaggaaaac ggcactgtca gcatcattga
    15001 tgatactggc aatccttccg aagtggctgt ttattccaac ggcatcgtcg ccatgccgct
    15061 gtatccagta gcagagcgcc tcgctatggc aaacaacatt gagggagcga tgatagaacg
    15121 ttttggcatc gagtctggca cagaacgcgc catcattttc tacagagcca tgatggatgt
    15181 ggaacaagga gcactgactc catttggtcg tgaaacgctt gctgaacttc acaacagctt
    15241 tatagctgaa ctgaatgaaa acggcatgcc agcggaacca gtgacgcact gaggatggag
    15301 ccatgattac taaaaatttc cgactgaatg cgctggcaaa taagtatgcg tcggcactgt
    15361 ataaccacat tacctccacc agcggcgggg actatttcat ggttgatgcg gacggcgagg
    15421 ccgtacgtgt ggaaatcgtt aatggagtaa aaggcgttcg cagcctgatc gatagctaca
    15481 cactggcagc catgaaagtg ttctacccgc agtgggaaac cgtggggatc gagcttcttg
    15541 agcgttgcgt cactaaggac ggattgactg acgtcgggcg tgagatatgg caaagcatgg
    15601 ttaatgacat gggcgcaact gtagcgggag gttctcatgc gtgaaaatgc agaaatggcg
    15661 cttagctccg caatcggaga gcaggtggca aagattgctg gtgctgtgtg gattcataac
    15721 cttcattcta ctggtgaaga gaaaatggca attcagacgc cagagggacg caccattact
    15781 acatctctga agccgtcaga tgtttgtgat ctgatttgcg cattcatgta cccagcaatg
    15841 aggactgtcc acggcgataa gtggaaactt gcgacaaccg ctgaatttga tatgtggcta
    15901 aacaatgatg gcatgctgac tgattacgga ataaccaagt ggcagatgct ggttagccat
    15961 atcgcaaacg ctatagacca cgtggggtac ggtgatgcga aacattgatc ttatccgtca
    16021 ggttatcagt gcgtctgaaa acaactggcc tcatgtgctg ggctgcctga acataaatgt
    16081 ccctgactct ccgcgccgtc atgctccctg ccctgcatgt gggggcaaag atcgattccg
    16141 gttcgatgac aacgggcgcg gtagcttcat ctgtaatcag tgcggcgctg gtgatgggct
    16201 ggatttaatt aaacgcgtaa ataactgcga cacaacagag gcggcgcttc ttgccgctga
    16261 tgttctgggt attgattacc ggacaacgga aacaccagaa gccaccagcc agaaacggga
    16321 acaactggaa accgagcgcc agcgacgcga acaggagcgc ctgaaaaggg cagagaagga
    16381 cgaacaacaa agacgggata cgttttcccg tcagtttgat gacatgcgca gaaaggctgt
    16441 aaacggcaaa tctgattatc tggttgcgaa aggggtaggt gattttacat tccccgtgtt
    16501 gcccgatgga tctctgttgc tggcgctggt ggataaatcc ggcgcagtca cagcagcaca
    16561 gactattaca tcacatggtg aaaaaagact cctgacaggt tcagcaaagc ggggggcata
    16621 tc
//
LOCUS       DAJVTL010000390         2895 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.264, whole genome shotgun sequence.
ACCESSION   DAJVTL010000390 DAJVTL010000000
VERSION     DAJVTL010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.264"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..650)
                     /gene="tetR"
                     /locus_tag="OQQ26_004681"
     CDS             complement(<1..650)
                     /gene="tetR"
                     /locus_tag="OQQ26_004681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000164043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR"
                     /protein_id="HCS1859844.1"
                     /translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWH
                     FRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAG
                     TRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGG
                     TVEQAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
     gene            756..1955
                     /gene="tet(A)"
                     /locus_tag="OQQ26_004682"
     CDS             756..1955
                     /gene="tet(A)"
                     /locus_tag="OQQ26_004682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HCS1859845.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSG
                     AGQRADR"
     gene            complement(1987..2847)
                     /locus_tag="OQQ26_004683"
     CDS             complement(1987..2847)
                     /locus_tag="OQQ26_004683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000493383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HCS1859846.1"
                     /translation="MFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALPAGLLLVMI
                     VRQIPTGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLMVVFISAAL
                     LGSPIRLMAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGTVLTRKWQP
                     PVPLLTFTAWQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAGLTYFLWFR
                     GISRLEPTVVSLLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWLGQRSNRTP
                     RARIACRKSP"
BASE COUNT          545 a          916 c          875 g          559 t
ORIGIN      
        1 caatcgtcac cctttctcgg tccttcaacg ttcctgacaa cgagcctcct tttcgccaat
       61 ccatcgacaa tcaccgcgag tccctgctcg aacgctgcgt ccggaccggc ttcgtcgaag
      121 gcgtctatcg cggcccgcaa cagcggcgag agcggagcct gttcaacggt gccgccgcgc
      181 tcgccggcat cgctgtcgcc ggcctgctcc tcaagcacgg ccccaacagt gaagtagctg
      241 attgtcatca gcgcattgac ggcgtccccg gccgaaaaac ccgcctcgca gaggaagcga
      301 agctgcgcgt cggccgtttc catctgcggt gcgcccggtc gcgtgccggc atggatgcgc
      361 gcgccatcgc ggtaggcgag cagcgcctgc ctgaagctgc gggcattccc gatcagaaat
      421 gagcgccagt cgtcgtcggc tctcggcacc gaatgcgtat gattctccgc cagcatggct
      481 tcggccagtg cgtcgagcag cgcccgcttg ttcctgaagt gccagtaaag cgccggctgc
      541 tgaaccccca accgttccgc cagtttgcgt gtcgtcagac cgtctacgcc gacctcgttc
      601 aacaggtcca gggcggcacg gatcactgta ttcggctgca actttgtcat gcttgacact
      661 ttatcactga taaacataat atgtccacca acttatcagt gataaagaat ccgcgcgttc
      721 aatcggacca gcggaggctg gtccggaggc cagacgtgaa acccaacaga cccctgatcg
      781 taattctgag cactgtcgcg ctcgacgctg tcggcatcgg cctgattatg ccggtgctgc
      841 cgggcctcct gcgcgatctg gttcactcga acgacgtcac cgcccactat ggcattctgc
      901 tggcgctgta tgcgttgatg caatttgcct gcgcacctgt gctgggcgcg ctgtcggatc
      961 gtttcgggcg gcggccggtc ttgctcgtct cgctggccgg cgctgctgtc gactacgcca
     1021 tcatggcgac ggcgcctttc ctttgggttc tctatatcgg gcggatcgtg gccggcatca
     1081 ccggggcgac tggggcggta gccggcgctt atattgccga tatcactgat ggcgatgagc
     1141 gcgcgcggca cttcggcttc atgagcgcct gtttcgggtt cgggatggtc gcgggacctg
     1201 tgctcggtgg gctgatgggc ggtttctccc cccacgctcc gttcttcgcc gcggcagcct
     1261 tgaacggcct caatttcctg acgggctgtt tccttttgcc ggagtcgcac aaaggcgaac
     1321 gccggccgtt acgccgggag gctctcaacc cgctcgcttc gttccggtgg gcccggggca
     1381 tgaccgtcgt cgccgccctg atggcggtct tcttcatcat gcaacttgtc ggacaggtgc
     1441 cggccgcgct ttgggtcatt ttcggcgagg atcgctttca ctgggacgcg accacgatcg
     1501 gcatttcgct tgccgcattt ggcattctgc attcactcgc ccaggcaatg atcaccggcc
     1561 ctgtagccgc ccggctcggc gaaaggcggg cactcatgct cggaatgatt gccgacggca
     1621 caggctacat cctgcttgcc ttcgcgacac ggggatggat ggcgttcccg atcatggtcc
     1681 tgcttgcttc gggtggcatc ggaatgccgg cgctgcaagc aatgttgtcc aggcaggtgg
     1741 atgaggaacg tcaggggcag ctgcaaggct cactggcggc gctcaccagc ctgacctcga
     1801 tcgtcggacc cctcctcttc acggcgatct atgcggcttc tataacaacg tggaacgggt
     1861 gggcatggat tgcaggcgct gccctctact tgctctgcct gccggcgctg cgtcgcgggc
     1921 tttggagcgg cgcagggcaa cgagccgatc gctgatcgtg gaaacgatag gcctatgcca
     1981 tgcgggtcaa ggcgacttcc ggcaagctat acgcgcccta ggagtgcggt tggaacgttg
     2041 gcccagccag atactcccga tcacgagcag gacgccgatg atttgaagcg cactcagcgt
     2101 ctgatccaag aacaaccatc ctagcaacac ggcggtcccc gggctgagaa agcccagtaa
     2161 ggaaacaact gtaggttcga gtcgcgagat cccccggaac caaaggaagt aggttaaacc
     2221 cgctccgatc aggccgagcc acgccaggcc gagaacattg gttcctgtag gcatcgggat
     2281 tggcggatca aacactaaag ctactggaac gagcagaagt cctccggccg ccagttgcca
     2341 ggcggtaaag gtgagcagag gcacgggagg ttgccacttg cgggtcagca cggttccgaa
     2401 cgccatggaa accgcccccg ccaggcccgc tgcgacgccg acaggatcta gcgctgcgtt
     2461 tggtgtcaac accaacagcg ccacgcccgc agttccgcaa atagccccca ggaccgccat
     2521 caatcgtatc gggctaccta gcagagcggc agagatgaac acgaccatca gcggctgcac
     2581 agcgcctacc gtcgccgcga ccccgcccgg caggcggtag accgaaataa acaacaagct
     2641 ccagaatagc gaaatattaa gtgcgccgag gatgaagatg cgcatccacc agattcccgt
     2701 tggaatctgt cggacgatca tcacgagcaa taaacccgcc ggcaacgccc gcagcatcgc
     2761 gaccgtcatc ggtgagaagt tcggcaggta ttgggtggtg acaatgtagg tgctgcccca
     2821 aatggcaggt gctatcgctg tgaacaataa atcggggcag acggcgcttc cagcgtgacg
     2881 accatgccga gcacg
//
LOCUS       DAJVTL010000391         2826 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.268, whole genome shotgun sequence.
ACCESSION   DAJVTL010000391 DAJVTL010000000
VERSION     DAJVTL010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.268"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            264..1079
                     /gene="sul2"
                     /locus_tag="OQQ26_004684"
     CDS             264..1079
                     /gene="sul2"
                     /locus_tag="OQQ26_004684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HCS1859847.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIERIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            1140..1943
                     /locus_tag="OQQ26_004685"
                     /note="aph(3'')-Ib"
     CDS             1140..1943
                     /locus_tag="OQQ26_004685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HCS1859848.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            1943..2779
                     /locus_tag="OQQ26_004686"
     CDS             1943..2779
                     /locus_tag="OQQ26_004686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HCS1859849.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
BASE COUNT          569 a          777 c          805 g          675 t
ORIGIN      
        1 tcaatggctt attttcctgc taattggtaa taccatgaaa aataccatgc tcagaaaagg
       61 cttaacaata ttttgaaaaa ttgcctactg agcgctgccg cacagctcca taggccgctt
      121 tcctggcttt gcttccagat gtatgctatt ctgctcctgc agctaatgga tcaccgcaaa
      181 caggttactc gcctggggat tccctttcga cccgagcatc cgtatgagac tcatgctcga
      241 ttattattat tatagaagcc cccatgaata aatcgctcat cattttcggc atcgtcaaca
      301 taacctcgga cagtttctcc gatggaggcc ggtatctggc gccagacgca gccattgcgc
      361 aggcgcgtaa gctgatggcc gagggggcag atgtgatcga cctcggtccg gcatccagca
      421 accccgacgc cgcgcctgtt tcgtccgaca cagaaatcga gcgtatcgcg ccggtgctgg
      481 acgcgctcaa ggcagatggc attcccgtct cgctcgacag ttatcaaccc gcgacgcaag
      541 cctatgcctt gtcgcgtggt gtggcctatc tcaatgatat tcgcggtttt ccagacgctg
      601 cgttctatcc gcaattggcg aaatcatctg ccaaactcgt cgttatgcat tcggtgcaag
      661 acgggcaggc agatcggcgc gaggcacccg ctggcgacat catggatcac attgcggcgt
      721 tctttgacgc gcgcatcgcg gcgctgacgg gtgccggtat caaacgcaac cgccttgtcc
      781 ttgatcccgg catggggttt tttctggggg ctgctcccga aacctcgctc tcggtgctgg
      841 cgcggttcga tgaattgcgg ctgcgcttcg atttgccggt gcttctgtct gtttcgcgca
      901 aatcctttct gcgcgcgctc acaggccgtg gtccggggga tgtcggggcc gcgacactcg
      961 ctgcagagct tgccgccgcc gcaggtggag ctgacttcat ccgcacacac gagccgcgcc
     1021 ccttgcgcga cgggctggcg gtattggcgg cgctaaaaga aaccgcaaga attcgttaac
     1081 tgcacattcg ggatatttct ctatattcgc gcttcatcag aaaactgaag gaacctccat
     1141 tgaatcgaac taatattttt tttggtgaat cgcattctga ctggttgcct gtcagaggcg
     1201 gagaatctgg tgattttgtt tttcgacgtg gtgacgggca tgccttcgcg aaaatcgcac
     1261 ctgcttcccg ccgcggtgag ctcgctggag agcgtgaccg cctcatttgg ctcaaaggtc
     1321 gaggtgtggc ttgccccgag gtcatcaact ggcaggagga acaggagggt gcatgcttgg
     1381 tgataacggc aattccggga gtaccggcgg ctgatctgtc tggagcggat ttgctcaaag
     1441 cgtggccgtc aatggggcag caacttggcg ctgttcacag cctatcggtt gatcaatgtc
     1501 cgtttgagcg caggctgtcg cgaatgttcg gacgcgccgt tgatgtggtg tcccgcaatg
     1561 ccgtcaatcc cgacttctta ccggacgagg acaagagtac gccgcagctc gatcttttgg
     1621 ctcgtgtcga acgagagcta ccggtgcggc tcgaccaaga gcgcaccgat atggttgttt
     1681 gccatggtga tccctgcatg ccgaacttca tggtggaccc taaaactctt caatgcacgg
     1741 gtctgatcga ccttgggcgg ctcggaacag cagatcgcta tgccgatttg gcactcatga
     1801 ttgctaacgc cgaagagaac tgggcagcgc cagatgaagc agagcgcgcc ttcgctgtcc
     1861 tattcaatgt attggggatc gaagcccccg accgcgaacg ccttgccttc tatctgcgat
     1921 tggaccctct gacttggggt tgatgttcat gccgcctgtt tttcctgctc attggcacgt
     1981 ttcgcaacct gttctcattg cggacacctt ttccagcctc gtttggaaag tttcattgcc
     2041 agacgggact cctgcaatcg tcaagggatt gaaacctata gaagacattg ctgatgaact
     2101 gcgcggggcc gactatctgg tatggcgcaa tgggagggga gcagtccggt tgctcggtcg
     2161 tgagaacaat ctgatgttgc tcgaatatgc cggggagcga atgctctctc acatcgttgc
     2221 cgagcacggc gactaccagg cgaccgaaat tgcagcggaa ctaatggcga agctgtatgc
     2281 cgcatctgag gaacccctgc cttctgccct tctcccgatc cgggatcgct ttgcagcttt
     2341 gtttcagcgg gcgcgcgatg atcaaaacgc aggttgtcaa actgactacg tccacgcggc
     2401 gattatagcc gatcaaatga tgagcaatgc ctcggaactg cgtgggctac atggcgatct
     2461 gcatcatgaa aacatcatgt tctccagtcg cggctggctg gtgatagatc ccgtcggtct
     2521 ggtcggtgaa gtgggctttg gcgccgccaa tatgttctac gatccggctg acagagacga
     2581 cctttgtctc gatcctagac gcattgcaca gatggcggac gcattctctc gtgcgctgga
     2641 cgtcgatccg cgtcgcctgc tcgaccaggc gtacgcttat gggtgccttt ccgcagcttg
     2701 gaacgcggat ggagaagagg agcaacgcga tctagctatc gcggccgcga tcaagcaggt
     2761 gcgacagacg tcatactaga tatcaagggc actgttgcaa agttagcgat gaggcagcct
     2821 tttgtc
//
LOCUS       DAJVTL010000392         2441 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.280, whole genome shotgun sequence.
ACCESSION   DAJVTL010000392 DAJVTL010000000
VERSION     DAJVTL010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.280"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..112)
                     /locus_tag="OQQ26_004687"
     CDS             complement(<1..112)
                     /locus_tag="OQQ26_004687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
                     /protein_id="HCS1859850.1"
                     /translation="MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRK"
     gene            391..1050
                     /locus_tag="OQQ26_004688"
     CDS             391..1050
                     /locus_tag="OQQ26_004688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HCS1859851.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
     gene            complement(1251..1628)
                     /locus_tag="OQQ26_004689"
     CDS             complement(1251..1628)
                     /locus_tag="OQQ26_004689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HCS1859852.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
     gene            complement(1695..>2441)
                     /locus_tag="OQQ26_004690"
     CDS             complement(1695..>2441)
                     /locus_tag="OQQ26_004690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HCS1859853.1"
                     /translation="HESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKL
                     YIPKGDAAYDALKPMIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPR
                     QNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEI
                     RDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWE
                     HINLTGDYLWRSSAKIGAGKFRPLRPLQPA"
BASE COUNT          585 a          615 c          659 g          582 t
ORIGIN      
        1 ttttacggca gtgagagcag agatagcgct gatgtccggc ggtgcttttg ccgttacgca
       61 ccaccccgtc agtagctgaa caggagggac agctgataga aacagaagcc actggagcac
      121 ctcaaaaaca ccatcataca ctaaatcagt aagttggcag catcacccga cgcactttgc
      181 gccgaataaa tacctgtgac ggaagatcac ttcgcagaat aaataaatcc tggtgtccct
      241 gttgataccg ggaagccctg ggccaacttt tggcgaaaat gagacgttga tcggcacgta
      301 agaggttcca actttcacca taatgaaata agatcactac cgggcgtatt ttttgagtta
      361 tcgagatttt caggagctaa ggaagctaaa atggagaaaa aaatcactgg atataccacc
      421 gttgatatat cccaatggca tcgtaaagaa cattttgagg catttcagtc agttgctcaa
      481 tgtacctata accagaccgt tcagctggat attacggcct ttttaaagac cgtaaagaaa
      541 aataagcaca agttttatcc ggcctttatt cacattcttg cccgcctgat gaatgctcat
      601 ccggaattcc gtatggcaat gaaagacggt gagctggtga tatgggatag tgttcaccct
      661 tgttacaccg ttttccatga gcaaactgaa acgttttcat cgctctggag tgaataccac
      721 gacgatttcc ggcagtttct acacatatat tcgcaagatg tggcgtgtta cggtgaaaac
      781 ctggcctatt tccctaaagg gtttattgag aatatgtttt tcgtctcagc caatccctgg
      841 gtgagtttca ccagttttga tttaaacgtg gccaatatgg acaacttctt cgcccccgtt
      901 ttcaccatgg gcaaatatta tacgcaaggc gacaaggtgc tgatgccgct ggcgattcag
      961 gttcatcatg ccgtttgtga tggcttccat gtcggcagaa tgcttaatga attacaacag
     1021 tactgcgatg agtggcaggg cggggcgtaa tttttttaag gcagttattg gtgcccttaa
     1081 acgcctggtt gctacgcctg aataagtgat aataagcgga tgaatggcag aaattcgaaa
     1141 gcaaattcga cccggtcgtc ggttcagggc agggtcgtta aatagccgct tatgtctatt
     1201 gctggtttac cggtttattg actaccggaa gcagtgtgac cgtgtgcttc tcaaatgcct
     1261 gaggccagtt tgctcaggct ctccccgtgg aggtaataat tgacgatatg atcatttatt
     1321 ctgcctccca gagcctgata aaaacggtta gcgccggggt tggatttttc agcgttccag
     1381 ctaaggctaa ggcattcctg ttcaagcgca agccgggcta taaagcgcat tatcgcttta
     1441 cccgtgccct tatttcgatc gcactgagaa acatacagct ctttaatatg cagctgaccg
     1501 ctgtatcggg gcgagggata aagaatattg caacatgcca ggccagtaat gttattgccg
     1561 cagcgcgctc tgatcaccag ggtaccggaa agccggttga ataacttttt acagagataa
     1621 tccttcatca acgcttcctg aatgatacct tcgccataat aggggtcgtc tcagaaaacg
     1681 gaaaataaag cacgctaagc cggttgcaga ggccgtagcg gcctgaactt ccccgcgccg
     1741 atcttggcgc tgctgcgcca taggtaatca ccggtcaggt tgatgtgctc ccagccgagt
     1801 ggcgacaggt actgcaatag cgagtcatcg acggcatgac cattgccgcg caacgcatgc
     1861 gccgcacgct ccaggtagac cgtgttccac agcacgatgg ccgccgtcac caggttgagg
     1921 ccgctggccc ggtagcgctg ctgctcgaaa ctgcggtcac ggatttcacc aaggcggttg
     1981 aagaacacgg cacgggccag cgcattgcgc gcctcgccct tgttcagccc ggcatgcacg
     2041 cggcggcgta gctcgacgct ttgcagccag tcgaggatga acagcgtgcg ctcgatgcgg
     2101 cccaactcgc gcagcgcgac ggccaagccg ttctggcgcg ggtagctgcc gagtttcctg
     2161 agcatcagcg aggccgtcac cgtgccctgc ttgatcgagg tggccagccg caggatttcg
     2221 tcccaatggg cgcggacgtg cttgatgttg agcgtgccgc cgatcatcgg cttgagcgcg
     2281 tcataggcgg catcgccctt cgggatgtag agcttggtgt cgcccaggtc gcggatgcgc
     2341 ggcgcgaagc ggaagcccaa gaggtgcatc agggcgaaga cgtgatcggt gaagcccgcc
     2401 gtgtcggtgt agtgctcctc gatccgcagg tcggattcgt g
//
LOCUS       DAJVTL010000393         1546 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.314, whole genome shotgun sequence.
ACCESSION   DAJVTL010000393 DAJVTL010000000
VERSION     DAJVTL010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.314"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..331)
                     /locus_tag="OQQ26_004691"
     CDS             complement(<1..331)
                     /locus_tag="OQQ26_004691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HCS1859854.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDRHCCK
                     VSDEAAFC"
     gene            489..962
                     /locus_tag="OQQ26_004692"
     CDS             489..962
                     /locus_tag="OQQ26_004692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001389366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA7"
                     /protein_id="HCS1859855.1"
                     /translation="MKISLISATSENGVIGNGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFDSMGVLPNRKYAVVSRKGISSSNENVLVFPSIEIALQELSKITDHLYVSGGGQI
                     YNSLIEKADIIHLSTVHVEVEGDINFPKIPENFNLVFEQFFLSNINYTYQIWKKG"
     gene            1192..1539
                     /locus_tag="OQQ26_004693"
     CDS             1192..1539
                     /locus_tag="OQQ26_004693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacE delta 1"
                     /protein_id="HCS1859856.1"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
BASE COUNT          402 a          340 c          367 g          437 t
ORIGIN      
        1 gacaaaaggc tgcctcatcg ctaactttgc aacagtgccg atccgtgcac agcaccttgc
       61 cgtagaagaa cagcaaggcc gccaatgcct gacgatgcgt ggagaccgaa accttgcgct
      121 cgttcgccag ccaggacaga aatgcctcga cttcgctgct gcccaaggtt gccgggtgac
      181 gcacaccgtg gaaacggatg aaggcacgaa cccagtggac ataagcctgt tcggttcgta
      241 agctgtaatg caagtagcgt atgcgctcac gcaactggtc cagaaccttg accgaacgca
      301 gcggtggtaa cggcgcagtg gcggttttca tggcttgtta tgactgtttt tttgtacagt
      361 ctatgcctcg ggcatccaag cagcaagcgc gttacgccgt gggtcgatgt ttgatgttat
      421 ggagcagcaa cgatgttacg cagcagggca gtcgccctaa aacaaagtta gccattacgg
      481 gggttgaatt gaaaatttca ttgatttctg caacgtcaga aaatggcgta atcggtaatg
      541 gccctgatat cccatggtca gcaaaaggtg agcagttact ctttaaagcg ctcacatata
      601 atcagtggct ccttgttgga aggaaaacat ttgactctat gggtgttctt ccaaatcgaa
      661 aatatgcagt agtgtcgagg aaaggaattt caagctcaaa tgaaaatgta ttagtctttc
      721 cttcaataga aatcgctttg caagaactat cgaaaattac agatcattta tatgtctctg
      781 gtggcggtca aatctacaat agtcttattg aaaaagcaga tataattcat ttgtctactg
      841 ttcacgttga ggttgaaggt gatatcaatt ttcctaaaat tccagagaat ttcaatttgg
      901 tttttgagca gttttttttg tctaatataa attacacata tcagatttgg aaaaaaggct
      961 aacaagtcgt tccagcacca gtcgctgcgc tccttggaca gtttttaagt cgcggtttta
     1021 tggttttgct gcgcaaaagt attccataaa accacaactt aaaaactgcc gctgaactcg
     1081 gcgttagatg cactaagcac ataattgctc acagccaaac tatcaggtca agtctgcttt
     1141 tattattttt aagcgtgcat aataagccct acacaaattg ggagatatat catgaaaggc
     1201 tggctttttc ttgttatcgc aatagttggc gaagtaatcg caacatccgc attaaaatct
     1261 agcgagggct ttactaagct tgccccttcc gccgttgtca taatcggtta tggcatcgca
     1321 ttttattttc tttctctggt tctgaaatcc atccctgtcg gtgttgctta tgcagtctgg
     1381 tcgggactcg gcgtcgtcat aattacagcc attgcctggt tgcttcatgg gcaaaagctt
     1441 gatgcgtggg gctttgtagg tatggggctc ataattgctg cctttttgct cgcccgatcc
     1501 ccatcatgga agtcgctgcg gaggccgacg ccatggtgac ggtgtt
//
LOCUS       DAJVTL010000394         1546 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.315, whole genome shotgun sequence.
ACCESSION   DAJVTL010000394 DAJVTL010000000
VERSION     DAJVTL010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.315"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            complement(<1..331)
                     /locus_tag="OQQ26_004694"
     CDS             complement(<1..331)
                     /locus_tag="OQQ26_004694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HCS1859857.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDRHCCK
                     VSDEAAFC"
     gene            489..962
                     /locus_tag="OQQ26_004695"
     CDS             489..962
                     /locus_tag="OQQ26_004695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001389366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA7"
                     /protein_id="HCS1859858.1"
                     /translation="MKISLISATSENGVIGNGPDIPWSAKGEQLLFKALTYNQWLLVG
                     RKTFDSMGVLPNRKYAVVSRKGISSSNENVLVFPSIEIALQELSKITDHLYVSGGGQI
                     YNSLIEKADIIHLSTVHVEVEGDINFPKIPENFNLVFEQFFLSNINYTYQIWKKG"
     gene            1192..1539
                     /locus_tag="OQQ26_004696"
     CDS             1192..1539
                     /locus_tag="OQQ26_004696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000679427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacE delta 1"
                     /protein_id="HCS1859859.1"
                     /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF
                     YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR
                     SPSWKSLRRPTPW"
BASE COUNT          401 a          340 c          368 g          437 t
ORIGIN      
        1 gacaaaaggc tgcctcatcg ctaactttgc aacagtgccg atccgtgcac agcaccttgc
       61 cgtagaagaa cagcaaggcc gccaatgcct gacgatgcgt ggagaccgaa accttgcgct
      121 cgttcgccag ccaggacaga aatgcctcga cttcgctgct gcccaaggtt gccgggtgac
      181 gcacaccgtg gaaacggatg aaggcacgaa cccagtggac ataagcctgt tcggttcgta
      241 agctgtaatg caagtagcgt atgcgctcac gcaactggtc cagaaccttg accgaacgca
      301 gcggtggtaa cggcgcagtg gcggttttca tggcttgtta tgactgtttt tttgtacagt
      361 ctatgcctcg ggcatccaag cagcaagcgc gttacgccgt gggtcgatgt ttgatgttat
      421 ggagcagcaa cgatgttacg cagcagggca gtcgccctaa aacaaagtta gccattacgg
      481 gggttgaatt gaaaatttca ttgatttctg caacgtcaga aaatggcgta atcggtaatg
      541 gccctgatat cccatggtca gcaaaaggtg agcagttact ctttaaagcg ctcacatata
      601 atcagtggct ccttgttgga aggaaaacat ttgactctat gggtgttctt ccaaatcgaa
      661 aatatgcagt agtgtcgagg aaaggaattt caagctcaaa tgaaaatgta ttagtctttc
      721 cttcaataga aatcgctttg caagaactat cgaaaattac agatcattta tatgtctctg
      781 gtggcggtca aatctacaat agtcttattg aaaaagcaga tataattcat ttgtctactg
      841 ttcacgttga ggttgaaggt gatatcaatt ttcctaaaat tccagagaat ttcaatttgg
      901 tttttgagca gttttttttg tctaatataa attacacata tcagatttgg aaaaaaggct
      961 aacaagtcgt tccagcacca gtcgctgcgc tccttggaca gtttttaagt cgcggtttta
     1021 tggttttgct gcgcaaaagt attccataaa accacaactt aaaaactgcc gctgaactcg
     1081 gcgttagatg cactaagcac ataattgctc acagccaaac tatcaggtca agtctgcttt
     1141 tattattttt aagcgtgcat aataagccct acacaaattg ggagatatat catgaaaggc
     1201 tggctttttc ttgttatcgc aatagttggc gaagtaatcg caacatccgc attaaaatct
     1261 agcgagggct ttactaagct tgccccttcc gccgttgtca taatcggtta tggcatcgca
     1321 ttttattttc tttctctggt tctgaaatcc atccctgtcg gtgttgctta tgcagtctgg
     1381 tcgggactcg gcgtcgtcat aattacagcc attgcctggt tgcttcatgg gcaaaagctt
     1441 gatgcgtggg gctttgtagg tatggggctc ataattgctg cctttttgct cgcccgatcc
     1501 ccatcgtgga agtcgctgcg gaggccgacg ccatggtgac ggtgtt
//
LOCUS       DAJVTL010000395         1502 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.317, whole genome shotgun sequence.
ACCESSION   DAJVTL010000395 DAJVTL010000000
VERSION     DAJVTL010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.317"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            <1..293
                     /locus_tag="OQQ26_004697"
     CDS             <1..293
                     /locus_tag="OQQ26_004697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HCS1859860.1"
                     /translation="DKFITTDYLQQCHMGQMVVTILSAVAQAERRRILERTNEGRQEA
                     KLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS"
     gene            476..1336
                     /locus_tag="OQQ26_004698"
     CDS             476..1336
                     /locus_tag="OQQ26_004698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A broad-spectrum beta-lactamase TEM-1"
                     /protein_id="HCS1859861.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
BASE COUNT          411 a          327 c          366 g          398 t
ORIGIN      
        1 atgataagtt tatcaccacc gactatttgc aacagtgcca tatggggcaa atggtggtca
       61 ccatcctgtc ggctgtggca caggctgaac gccggaggat cctagaacgc acgaatgagg
      121 gccgacagga agcaaagctg aaaggaatca aatttggccg caggcgtacc gtggacagga
      181 acgtcgtgct gacgcttcat cagaagggca ctggtgcaac ggaaattgct catcagctca
      241 gtattgcccg ctccacggtt tataaaattc ttgaagacga aagggcctcg tgatacgcct
      301 atttttatag gttaatgtca tgataataat ggtttcttag acgtcaggtg gcacttttcg
      361 gggaaatgtg cgcggaaccc ctatttgttt atttttctaa atacattcaa atatgtatcc
      421 gctcatgaga caataaccct ggtaaatgct tcaataatat tgaaaaagga agagtatgag
      481 tattcaacat tttcgtgtcg cccttattcc cttttttgcg gcattttgcc ttcctgtttt
      541 tgctcaccca gaaacgctgg tgaaagtaaa agatgctgaa gatcagttgg gtgcacgagt
      601 gggttacatc gaactggatc tcaacagcgg taagatcctt gagagttttc gccccgaaga
      661 acgttttcca atgatgagca cttttaaagt tctgctatgt ggtgcggtat tatcccgtgt
      721 tgacgccggg caagagcaac tcggtcgccg catacactat tctcagaatg acttggttga
      781 gtactcacca gtcacagaaa agcatcttac ggatggcatg acagtaagag aattatgcag
      841 tgctgccata accatgagtg ataacactgc tgccaactta cttctgacaa cgatcggagg
      901 accgaaggag ctaaccgctt ttttgcacaa catgggggat catgtaactc gccttgatcg
      961 ttgggaaccg gagctgaatg aagccatacc aaacgacgag cgtgacacca cgatgcctgc
     1021 agcaatggca acaacgttgc gcaaactatt aactggcgaa ctacttactc tagcttcccg
     1081 gcaacaatta atagactgga tggaggcgga taaagttgca ggaccacttc tgcgctcggc
     1141 ccttccggct ggctggttta ttgctgataa atctggagcc ggtgagcgtg ggtctcgcgg
     1201 tatcattgca gcactggggc cagatggtaa gccctcccgt atcgtagtta tctacacgac
     1261 ggggagtcag gcaactatgg atgaacgaaa tagacagatc gctgagatag gtgcctcact
     1321 gattaagcat tggtaactgt cagaccaagt ttactcatat atactttaga ttgatttaaa
     1381 acttcatttt taatttaaaa ggatctaggt gaagatcctt tttgataatc tcatgaccaa
     1441 aatcccttaa cgtgagtttt cgtggcactg ttgcaaatag tcggtggtga taaacttatc
     1501 at
//
LOCUS       DAJVTL010000396          826 bp    DNA     linear   BCT 11-NOV-2022
DEFINITION  TPA_asm: Shigella dysenteriae isolate 401228
            SAMEA8900022-rid15853433.guided.348, whole genome shotgun sequence.
ACCESSION   DAJVTL010000396 DAJVTL010000000
VERSION     DAJVTL010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA8900022
            Sequence Read Archive: ERR6005838
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella dysenteriae
  ORGANISM  Shigella dysenteriae
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2022) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 10-NOV-2022
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001478752.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001478752.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/11/2022 02:36:54
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 4,699
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,225
            CDSs (with protein)               :: 4,225
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 174 of 386
            Pseudo Genes (incomplete)         :: 121 of 386
            Pseudo Genes (internal stop)      :: 139 of 386
            Pseudo Genes (multiple problems)  :: 45 of 386
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Shigella dysenteriae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA8900022-rid15853433.guided.348"
                     /serovar="S. dysenteriae 2"
                     /isolate="401228"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:622"
                     /country="Kenya"
                     /collection_date="2008-08-15"
     gene            27..806
                     /locus_tag="OQQ26_004699"
     CDS             27..806
                     /locus_tag="OQQ26_004699"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000259031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HCS1859862.1"
                     /translation="MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDV
                     GPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLND
                     IQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSAL
                     RRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGAT
                     VGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRALLQS"
BASE COUNT          143 a          255 c          258 g          170 t
ORIGIN      
        1 tggaagtcgc tgcggaggcc gacgccatgg tgacggtgtt cggcattctg aatctcaccg
       61 aggactcctt cttcgatgag agccggcggc tagaccccgc cggcgctgtc accgcggcga
      121 tcgaaatgct gcgagtcgga tcagacgtcg tggatgtcgg accggccgcc agccatccgg
      181 acgcgaggcc tgtatcgccg gccgatgaga tcagacgtat tgcgccgctc ttagacgccc
      241 tgtccgatca gatgcaccgt gtttcaatcg acagcttcca accggaaacc cagcgctatg
      301 cgctcaagcg cggcgtgggc tacctgaacg atatccaagg atttcctgac cctgcgctct
      361 atcccgatat tgctgaggcg gactgcaggc tggtggttat gcactcagcg cagcgggatg
      421 gcatcgccac ccgcaccggt caccttcgac ccgaagacgc gctcgacgag attgtgcggt
      481 tcttcgaggc gcgggtttcc gccttgcgac ggagcggggt cgctgccgac cggctcatcc
      541 tcgatccggg gatgggattt ttcttgagcc ccgcaccgga aacatcgctg cacgtgctgt
      601 cgaaccttca aaagctgaag tcggcgttgg ggcttccgct attggtctcg gtgtcgcgga
      661 aatccttctt gggcgccacc gttggccttc ctgtaaagga tctgggtcca gcgagccttg
      721 cggcggaact tcacgcgatc ggcaatggcg ctgactacgt ccgcacccac gcgcctggag
      781 atctgcgggc actgttgcaa agttagcgat gaggcagcct tttgtc
//
